Query 045902
Match_columns 1472
No_of_seqs 871 out of 5952
Neff 7.4
Searched_HMMs 46136
Date Fri Mar 29 06:43:08 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045902.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045902hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG0065 Pleiotropic drug resis 100.0 2E-257 5E-262 2380.3 93.9 1341 53-1472 12-1387(1391)
2 PLN03140 ABC transporter G fam 100.0 3E-239 7E-244 2381.5 142.0 1412 53-1472 41-1470(1470)
3 TIGR00956 3a01205 Pleiotropic 100.0 2E-187 3E-192 1890.3 131.3 1289 115-1467 3-1389(1394)
4 PLN03211 ABC transporter G-25; 100.0 5.7E-91 1.2E-95 884.7 60.1 577 874-1469 36-659 (659)
5 TIGR00955 3a01204 The Eye Pigm 100.0 9.3E-91 2E-95 884.7 59.5 560 902-1472 37-617 (617)
6 KOG0061 Transporter, ABC super 100.0 2.5E-90 5.4E-95 869.7 55.9 572 874-1471 22-611 (613)
7 TIGR00956 3a01205 Pleiotropic 100.0 7.5E-89 1.6E-93 925.7 61.7 558 901-1469 72-695 (1394)
8 PLN03140 ABC transporter G fam 100.0 7.2E-88 1.6E-92 910.8 59.8 587 873-1468 127-789 (1470)
9 KOG0061 Transporter, ABC super 100.0 1.3E-82 2.9E-87 799.8 57.0 584 135-800 21-608 (613)
10 TIGR00955 3a01204 The Eye Pigm 100.0 7E-82 1.5E-86 803.3 59.7 573 182-799 34-612 (617)
11 PLN03211 ABC transporter G-25; 100.0 8.4E-81 1.8E-85 791.7 62.3 609 134-800 34-658 (659)
12 KOG0065 Pleiotropic drug resis 100.0 3.1E-81 6.7E-86 788.7 38.6 560 901-1470 126-732 (1391)
13 KOG0055 Multidrug/pheromone ex 100.0 4E-72 8.8E-77 709.3 58.1 776 185-1108 365-1208(1228)
14 TIGR01257 rim_protein retinal- 100.0 2.2E-68 4.8E-73 719.5 71.8 212 877-1108 1937-2154(2272)
15 KOG0054 Multidrug resistance-a 100.0 8.6E-66 1.9E-70 667.8 46.3 761 186-1108 534-1357(1381)
16 COG1123 ATPase components of v 100.0 3.4E-64 7.4E-69 600.9 48.1 470 186-1108 22-514 (539)
17 PLN03130 ABC transporter C fam 100.0 3E-64 6.5E-69 691.4 53.3 212 876-1109 1236-1457(1622)
18 PTZ00265 multidrug resistance 100.0 1.1E-63 2.4E-68 679.7 55.8 216 877-1108 1165-1447(1466)
19 PLN03232 ABC transporter C fam 100.0 4.9E-64 1.1E-68 690.1 52.0 210 877-1108 1234-1453(1495)
20 PRK13549 xylose transporter AT 100.0 1.3E-62 2.8E-67 615.9 48.0 451 186-1110 18-491 (506)
21 PRK09700 D-allose transporter 100.0 5E-63 1.1E-67 620.6 44.0 451 186-1108 18-493 (510)
22 PRK10261 glutathione transport 100.0 3.2E-62 6.8E-67 623.7 50.2 198 903-1109 337-549 (623)
23 PRK10762 D-ribose transporter 100.0 2E-62 4.3E-67 613.6 47.1 443 186-1110 17-481 (501)
24 PRK15134 microcin C ABC transp 100.0 8.9E-62 1.9E-66 611.6 50.1 196 903-1108 299-510 (529)
25 TIGR00957 MRP_assoc_pro multi 100.0 2.4E-61 5.2E-66 664.4 55.9 211 876-1108 1283-1503(1522)
26 TIGR03269 met_CoM_red_A2 methy 100.0 1.2E-61 2.7E-66 609.5 46.7 197 903-1108 297-512 (520)
27 PRK15439 autoinducer 2 ABC tra 100.0 1.3E-61 2.9E-66 606.5 46.2 447 186-1110 24-489 (510)
28 PRK11288 araG L-arabinose tran 100.0 2.8E-61 6.2E-66 603.1 45.8 444 186-1110 17-482 (501)
29 TIGR02633 xylG D-xylose ABC tr 100.0 7.4E-61 1.6E-65 600.0 47.8 452 186-1108 14-487 (500)
30 PRK10982 galactose/methyl gala 100.0 2.8E-60 6E-65 593.2 45.6 442 186-1108 11-475 (491)
31 PTZ00243 ABC transporter; Prov 100.0 2.7E-59 5.8E-64 642.0 54.8 211 876-1108 1307-1528(1560)
32 TIGR01271 CFTR_protein cystic 100.0 1.6E-58 3.5E-63 634.5 60.3 210 876-1108 1216-1435(1490)
33 PRK10938 putative molybdenum t 100.0 4.2E-59 9.1E-64 582.8 38.9 195 187-433 17-222 (490)
34 PRK11819 putative ABC transpor 100.0 2.1E-56 4.5E-61 564.8 52.3 199 877-1107 324-527 (556)
35 COG4172 ABC-type uncharacteriz 100.0 1.1E-56 2.4E-61 502.2 42.7 465 184-1108 21-511 (534)
36 PRK15064 ABC transporter ATP-b 100.0 1.2E-56 2.6E-61 565.3 47.9 198 877-1108 319-520 (530)
37 TIGR03719 ABC_ABC_ChvD ATP-bin 100.0 1.3E-56 2.7E-61 566.8 48.2 199 877-1107 322-525 (552)
38 PRK13409 putative ATPase RIL; 100.0 7.1E-55 1.5E-59 548.1 37.7 197 905-1122 354-554 (590)
39 PRK11147 ABC transporter ATPas 100.0 7.2E-53 1.6E-57 539.5 54.8 200 877-1108 319-523 (635)
40 PRK10636 putative ABC transpor 100.0 2.7E-53 5.9E-58 541.8 48.7 197 877-1108 312-512 (638)
41 COG1129 MglA ABC-type sugar tr 100.0 8E-52 1.7E-56 492.0 44.3 444 185-1107 20-484 (500)
42 PLN03073 ABC transporter F fam 100.0 1.1E-50 2.5E-55 518.2 49.3 198 877-1108 508-709 (718)
43 COG0488 Uup ATPase components 100.0 4.5E-50 9.8E-55 491.0 41.9 223 185-434 15-239 (530)
44 COG3845 ABC-type uncharacteriz 100.0 1.5E-48 3.4E-53 452.8 38.3 451 185-1110 16-489 (501)
45 COG1126 GlnQ ABC-type polar am 100.0 2E-43 4.3E-48 370.8 19.5 203 900-1108 12-220 (240)
46 COG1126 GlnQ ABC-type polar am 100.0 1.2E-41 2.5E-46 357.5 19.9 221 185-456 14-238 (240)
47 KOG0927 Predicted transporter 100.0 2.7E-40 5.9E-45 384.1 29.9 201 877-1108 389-591 (614)
48 COG1131 CcmA ABC-type multidru 100.0 3.5E-41 7.5E-46 390.5 22.1 198 902-1108 17-221 (293)
49 COG1135 AbcC ABC-type metal io 100.0 1.7E-40 3.7E-45 365.6 22.1 225 184-459 17-247 (339)
50 COG1120 FepC ABC-type cobalami 100.0 1.5E-40 3.2E-45 368.6 20.5 210 878-1109 3-224 (258)
51 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 3.3E-40 7.1E-45 363.7 22.9 211 877-1110 4-224 (254)
52 COG1127 Ttg2A ABC-type transpo 100.0 1.4E-40 3E-45 354.7 18.8 230 877-1124 8-250 (263)
53 TIGR01257 rim_protein retinal- 100.0 1.4E-35 3E-40 402.3 70.5 212 876-1108 927-1144(2272)
54 COG1135 AbcC ABC-type metal io 100.0 3.7E-40 8E-45 362.9 18.8 199 902-1109 18-227 (339)
55 COG1131 CcmA ABC-type multidru 100.0 1.5E-39 3.2E-44 376.9 23.2 212 185-439 17-230 (293)
56 COG4555 NatA ABC-type Na+ tran 100.0 2.9E-40 6.4E-45 341.3 14.7 198 903-1109 15-218 (245)
57 COG1120 FepC ABC-type cobalami 100.0 6.3E-40 1.4E-44 363.6 18.3 210 185-434 14-227 (258)
58 COG1125 OpuBA ABC-type proline 100.0 2E-39 4.3E-44 346.3 20.5 208 185-435 13-225 (309)
59 COG3839 MalK ABC-type sugar tr 100.0 1.5E-39 3.2E-44 373.8 20.9 216 188-454 18-234 (338)
60 COG1116 TauB ABC-type nitrate/ 100.0 2.1E-39 4.6E-44 351.9 20.3 188 902-1099 15-207 (248)
61 COG3638 ABC-type phosphate/pho 100.0 2.3E-39 4.9E-44 344.6 18.9 201 901-1110 15-234 (258)
62 COG3638 ABC-type phosphate/pho 100.0 4E-39 8.7E-44 342.7 20.5 216 185-435 16-237 (258)
63 COG1136 SalX ABC-type antimicr 100.0 7E-39 1.5E-43 348.6 20.8 189 903-1100 18-219 (226)
64 COG1136 SalX ABC-type antimicr 100.0 1.7E-38 3.6E-43 345.7 22.9 196 185-424 17-220 (226)
65 COG3842 PotA ABC-type spermidi 100.0 7.3E-39 1.6E-43 370.0 20.0 223 185-457 17-240 (352)
66 COG1125 OpuBA ABC-type proline 100.0 3.7E-39 8.1E-44 344.1 15.5 200 901-1109 12-221 (309)
67 COG1118 CysA ABC-type sulfate/ 100.0 5E-39 1.1E-43 352.8 16.5 200 901-1109 13-223 (345)
68 COG1118 CysA ABC-type sulfate/ 100.0 1.1E-38 2.3E-43 350.2 18.8 223 185-456 14-240 (345)
69 COG1121 ZnuC ABC-type Mn/Zn tr 100.0 4.2E-38 9.1E-43 347.0 23.6 206 187-434 18-226 (254)
70 COG1127 Ttg2A ABC-type transpo 100.0 3.9E-38 8.4E-43 336.0 22.4 209 185-435 20-235 (263)
71 PRK13537 nodulation ABC transp 100.0 6.6E-38 1.4E-42 366.7 24.7 210 877-1108 7-222 (306)
72 COG1116 TauB ABC-type nitrate/ 100.0 3.3E-38 7.2E-43 342.6 19.5 194 186-424 16-211 (248)
73 COG1117 PstB ABC-type phosphat 100.0 4.4E-38 9.5E-43 328.5 18.8 214 876-1108 6-232 (253)
74 KOG0058 Peptide exporter, ABC 100.0 4.5E-38 9.7E-43 380.5 20.5 210 184-435 479-691 (716)
75 COG3839 MalK ABC-type sugar tr 100.0 3.3E-38 7.3E-43 362.7 18.4 196 905-1109 18-219 (338)
76 COG3842 PotA ABC-type spermidi 100.0 2.6E-38 5.7E-43 365.4 17.3 201 900-1109 15-222 (352)
77 COG2884 FtsE Predicted ATPase 100.0 7.6E-38 1.6E-42 321.2 18.4 194 903-1106 15-219 (223)
78 COG4555 NatA ABC-type Na+ tran 100.0 3.9E-38 8.4E-43 325.6 15.2 207 185-435 14-222 (245)
79 TIGR02314 ABC_MetN D-methionin 100.0 5E-37 1.1E-41 361.9 26.6 206 186-434 18-229 (343)
80 COG1117 PstB ABC-type phosphat 100.0 1.6E-37 3.5E-42 324.3 18.5 223 185-454 19-248 (253)
81 COG3840 ThiQ ABC-type thiamine 100.0 1.6E-37 3.4E-42 315.8 17.8 201 191-434 17-218 (231)
82 COG2274 SunT ABC-type bacterio 100.0 3.3E-37 7.2E-42 389.3 22.9 207 187-435 487-696 (709)
83 PRK13536 nodulation factor exp 100.0 9.2E-37 2E-41 360.5 24.9 211 876-1108 40-256 (340)
84 TIGR02314 ABC_MetN D-methionin 100.0 8.4E-37 1.8E-41 360.0 24.1 197 903-1108 18-225 (343)
85 PRK11650 ugpC glycerol-3-phosp 100.0 7E-37 1.5E-41 363.7 23.5 206 186-434 17-223 (356)
86 cd03261 ABC_Org_Solvent_Resist 100.0 8.1E-37 1.8E-41 345.8 22.9 197 903-1108 13-221 (235)
87 TIGR01188 drrA daunorubicin re 100.0 6.7E-37 1.5E-41 358.5 21.9 198 902-1108 5-208 (302)
88 TIGR03265 PhnT2 putative 2-ami 100.0 1.2E-36 2.7E-41 361.1 24.1 206 186-434 17-223 (353)
89 PRK11432 fbpC ferric transport 100.0 1.5E-36 3.3E-41 359.7 24.1 206 186-434 19-225 (351)
90 TIGR03265 PhnT2 putative 2-ami 100.0 1.6E-36 3.4E-41 360.3 23.9 210 878-1109 5-220 (353)
91 cd03268 ABC_BcrA_bacitracin_re 100.0 1.8E-36 3.9E-41 336.5 22.5 195 903-1106 13-208 (208)
92 PRK11432 fbpC ferric transport 100.0 2.1E-36 4.6E-41 358.5 24.4 211 877-1109 6-222 (351)
93 TIGR01186 proV glycine betaine 100.0 2.6E-36 5.6E-41 357.6 24.8 208 185-435 5-219 (363)
94 cd03226 ABC_cobalt_CbiO_domain 100.0 1E-36 2.2E-41 337.7 19.8 192 903-1103 13-205 (205)
95 PRK11650 ugpC glycerol-3-phosp 100.0 1.1E-36 2.4E-41 362.0 21.5 198 903-1109 17-220 (356)
96 cd03259 ABC_Carb_Solutes_like 100.0 2.1E-36 4.6E-41 337.2 22.2 195 903-1106 13-213 (213)
97 TIGR03258 PhnT 2-aminoethylpho 100.0 2.4E-36 5.2E-41 359.1 24.0 210 878-1109 6-224 (362)
98 PRK13537 nodulation ABC transp 100.0 4.3E-36 9.4E-41 351.3 25.8 206 186-435 20-227 (306)
99 COG1137 YhbG ABC-type (unclass 100.0 1.8E-37 3.9E-42 320.3 12.4 203 898-1109 12-224 (243)
100 PRK09452 potA putrescine/sperm 100.0 3.2E-36 7E-41 359.2 24.3 218 186-454 27-245 (375)
101 cd03293 ABC_NrtD_SsuB_transpor 100.0 4E-36 8.7E-41 336.6 23.5 196 903-1108 17-218 (220)
102 TIGR01288 nodI ATP-binding ABC 100.0 3.8E-36 8.3E-41 352.3 24.4 210 877-1108 4-219 (303)
103 TIGR03258 PhnT 2-aminoethylpho 100.0 3.7E-36 8E-41 357.5 24.2 206 186-434 18-227 (362)
104 COG0410 LivF ABC-type branched 100.0 3.9E-36 8.4E-41 320.9 21.7 206 186-435 16-226 (237)
105 cd03261 ABC_Org_Solvent_Resist 100.0 7.3E-36 1.6E-40 338.0 24.8 206 186-433 13-224 (235)
106 TIGR00960 3a0501s02 Type II (G 100.0 3.8E-36 8.2E-41 335.9 22.0 190 903-1101 16-215 (216)
107 cd03269 ABC_putative_ATPase Th 100.0 4.8E-36 1E-40 333.6 22.5 194 903-1106 13-210 (210)
108 cd03265 ABC_DrrA DrrA is the A 100.0 5.4E-36 1.2E-40 335.6 22.7 198 902-1108 12-216 (220)
109 cd03219 ABC_Mj1267_LivG_branch 100.0 6.2E-36 1.3E-40 338.9 23.1 197 903-1108 13-227 (236)
110 PRK11153 metN DL-methionine tr 100.0 1.2E-35 2.7E-40 352.7 26.7 206 186-434 18-229 (343)
111 TIGR03522 GldA_ABC_ATP gliding 100.0 7E-36 1.5E-40 349.5 24.1 197 902-1108 14-216 (301)
112 PRK09452 potA putrescine/sperm 100.0 7E-36 1.5E-40 356.3 24.4 211 877-1109 14-230 (375)
113 COG4559 ABC-type hemin transpo 100.0 3.4E-36 7.4E-41 313.5 18.7 210 878-1109 2-226 (259)
114 PRK10851 sulfate/thiosulfate t 100.0 6.4E-36 1.4E-40 355.1 23.6 198 903-1109 15-222 (353)
115 cd03296 ABC_CysA_sulfate_impor 100.0 8.3E-36 1.8E-40 338.3 23.5 209 878-1108 3-221 (239)
116 cd03301 ABC_MalK_N The N-termi 100.0 7.4E-36 1.6E-40 332.8 22.7 195 903-1106 13-213 (213)
117 COG2884 FtsE Predicted ATPase 100.0 6.6E-36 1.4E-40 306.9 20.1 200 186-429 15-220 (223)
118 COG1124 DppF ABC-type dipeptid 100.0 6.9E-36 1.5E-40 321.0 21.2 205 186-435 20-231 (252)
119 COG1122 CbiO ABC-type cobalt t 100.0 3.6E-36 7.9E-41 334.3 19.6 210 878-1108 4-223 (235)
120 COG1124 DppF ABC-type dipeptid 100.0 2.1E-36 4.6E-41 324.9 16.9 198 904-1109 21-227 (252)
121 cd03218 ABC_YhbG The ABC trans 100.0 9.2E-36 2E-40 336.6 23.0 198 902-1108 12-217 (232)
122 COG0411 LivG ABC-type branched 100.0 2.3E-36 4.9E-41 325.1 17.0 221 184-435 15-239 (250)
123 PRK11153 metN DL-methionine tr 100.0 9.7E-36 2.1E-40 353.6 24.1 214 878-1109 2-226 (343)
124 PRK10851 sulfate/thiosulfate t 100.0 1.2E-35 2.7E-40 352.7 24.9 210 186-434 15-225 (353)
125 cd03266 ABC_NatA_sodium_export 100.0 9.2E-36 2E-40 333.3 22.4 194 904-1106 19-218 (218)
126 PRK09536 btuD corrinoid ABC tr 100.0 5.7E-36 1.2E-40 358.8 22.0 210 878-1109 4-224 (402)
127 TIGR01186 proV glycine betaine 100.0 7.3E-36 1.6E-40 353.8 22.5 200 901-1109 4-215 (363)
128 COG1122 CbiO ABC-type cobalt t 100.0 1.2E-35 2.6E-40 330.2 22.7 207 186-435 17-228 (235)
129 cd03260 ABC_PstB_phosphate_tra 100.0 7.7E-36 1.7E-40 336.1 21.4 197 903-1108 13-224 (227)
130 PRK11000 maltose/maltodextrin 100.0 1.2E-35 2.5E-40 355.6 24.1 210 878-1109 4-219 (369)
131 TIGR01188 drrA daunorubicin re 100.0 9.6E-36 2.1E-40 348.7 22.9 206 186-435 6-213 (302)
132 TIGR03740 galliderm_ABC gallid 100.0 1.7E-35 3.7E-40 332.2 24.1 197 903-1109 13-209 (223)
133 PRK11607 potG putrescine trans 100.0 1.2E-35 2.6E-40 355.0 24.1 206 186-434 32-238 (377)
134 PRK11607 potG putrescine trans 100.0 1.9E-35 4.2E-40 353.2 25.6 211 877-1109 19-235 (377)
135 COG4152 ABC-type uncharacteriz 100.0 3.1E-36 6.6E-41 319.8 16.0 201 899-1109 11-215 (300)
136 cd03256 ABC_PhnC_transporter A 100.0 9.8E-36 2.1E-40 338.3 21.3 197 903-1108 14-229 (241)
137 cd03258 ABC_MetN_methionine_tr 100.0 1.5E-35 3.3E-40 335.0 22.7 196 904-1108 19-225 (233)
138 COG0411 LivG ABC-type branched 100.0 2.8E-36 6E-41 324.4 15.6 202 899-1109 13-235 (250)
139 PRK13536 nodulation factor exp 100.0 1.6E-35 3.6E-40 349.9 23.8 206 186-435 54-261 (340)
140 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 1.2E-35 2.5E-40 332.5 21.2 188 903-1099 17-216 (218)
141 PRK11000 maltose/maltodextrin 100.0 2E-35 4.4E-40 353.6 24.5 206 186-434 16-222 (369)
142 COG0410 LivF ABC-type branched 100.0 7.7E-36 1.7E-40 318.6 18.3 201 900-1109 13-222 (237)
143 cd03258 ABC_MetN_methionine_tr 100.0 3.9E-35 8.5E-40 331.6 24.9 205 187-434 19-229 (233)
144 COG3840 ThiQ ABC-type thiamine 100.0 4.6E-36 9.9E-41 305.1 15.4 192 908-1108 17-214 (231)
145 cd03293 ABC_NrtD_SsuB_transpor 100.0 4.4E-35 9.6E-40 328.2 25.1 200 186-430 17-218 (220)
146 cd03263 ABC_subfamily_A The AB 100.0 2.4E-35 5.2E-40 330.4 22.4 196 903-1108 15-216 (220)
147 cd03224 ABC_TM1139_LivF_branch 100.0 1.9E-35 4.2E-40 331.7 21.5 197 903-1108 13-216 (222)
148 PRK09493 glnQ glutamine ABC tr 100.0 3E-35 6.6E-40 334.0 23.3 197 903-1108 14-220 (240)
149 KOG0058 Peptide exporter, ABC 100.0 3.7E-36 8.1E-41 363.9 16.6 214 875-1108 463-686 (716)
150 cd03294 ABC_Pro_Gly_Bertaine T 100.0 2.1E-35 4.6E-40 340.3 21.9 201 899-1108 33-245 (269)
151 TIGR02673 FtsE cell division A 100.0 2.5E-35 5.5E-40 328.8 21.8 189 903-1099 15-213 (214)
152 COG4988 CydD ABC-type transpor 100.0 3.4E-35 7.5E-40 350.1 24.2 206 187-435 335-543 (559)
153 KOG0057 Mitochondrial Fe/S clu 100.0 4.1E-35 8.9E-40 343.0 24.2 229 131-435 343-574 (591)
154 PRK13637 cbiO cobalt transport 100.0 8.8E-35 1.9E-39 338.0 27.0 218 186-446 20-248 (287)
155 PRK11264 putative amino-acid A 100.0 3.5E-35 7.7E-40 335.6 23.3 209 878-1108 4-228 (250)
156 cd03259 ABC_Carb_Solutes_like 100.0 3.3E-35 7.1E-40 327.6 22.4 200 186-428 13-213 (213)
157 TIGR02315 ABC_phnC phosphonate 100.0 1.5E-35 3.4E-40 337.1 20.0 198 903-1109 15-231 (243)
158 PRK11629 lolD lipoprotein tran 100.0 6.2E-35 1.3E-39 329.9 24.8 213 877-1108 5-229 (233)
159 cd03234 ABCG_White The White s 100.0 5E-35 1.1E-39 329.1 23.8 198 903-1106 20-226 (226)
160 PRK11247 ssuB aliphatic sulfon 100.0 3.5E-35 7.5E-40 335.3 22.7 206 877-1108 12-218 (257)
161 cd03295 ABC_OpuCA_Osmoprotecti 100.0 3.4E-35 7.3E-40 334.0 22.6 197 903-1108 14-220 (242)
162 cd03292 ABC_FtsE_transporter F 100.0 3.2E-35 6.9E-40 328.0 21.6 190 903-1101 14-213 (214)
163 PRK13637 cbiO cobalt transport 100.0 4.1E-35 8.9E-40 340.7 23.3 214 878-1108 3-229 (287)
164 PRK11248 tauB taurine transpor 100.0 6.2E-35 1.3E-39 333.7 24.0 196 903-1108 14-215 (255)
165 COG1137 YhbG ABC-type (unclass 100.0 5.8E-36 1.2E-40 309.2 13.7 210 184-435 15-228 (243)
166 cd03235 ABC_Metallic_Cations A 100.0 1.5E-35 3.2E-40 330.5 18.0 192 903-1106 12-213 (213)
167 cd03296 ABC_CysA_sulfate_impor 100.0 8.9E-35 1.9E-39 329.9 24.6 209 186-433 15-224 (239)
168 PRK13634 cbiO cobalt transport 100.0 9.8E-35 2.1E-39 338.1 25.4 218 186-446 20-249 (290)
169 cd03219 ABC_Mj1267_LivG_branch 100.0 8.2E-35 1.8E-39 329.7 24.2 214 186-433 13-230 (236)
170 cd03265 ABC_DrrA DrrA is the A 100.0 6.4E-35 1.4E-39 326.9 22.9 205 186-433 13-219 (220)
171 PRK11629 lolD lipoprotein tran 100.0 1.5E-34 3.3E-39 326.7 26.1 201 186-430 22-229 (233)
172 PRK11174 cysteine/glutathione 100.0 6.2E-35 1.3E-39 373.6 25.8 207 186-435 363-572 (588)
173 PRK11614 livF leucine/isoleuci 100.0 5.8E-35 1.3E-39 331.0 22.6 211 877-1109 5-222 (237)
174 PRK13647 cbiO cobalt transport 100.0 5.9E-35 1.3E-39 337.3 23.0 210 878-1108 5-222 (274)
175 cd03294 ABC_Pro_Gly_Bertaine T 100.0 8.7E-35 1.9E-39 335.2 24.4 207 185-434 36-249 (269)
176 cd03264 ABC_drug_resistance_li 100.0 5.4E-35 1.2E-39 325.4 21.8 193 903-1106 13-211 (211)
177 PRK11831 putative ABC transpor 100.0 7.2E-35 1.6E-39 336.1 23.6 210 877-1108 7-228 (269)
178 cd03255 ABC_MJ0796_Lo1CDE_FtsE 100.0 6.2E-35 1.3E-39 326.6 22.2 195 186-424 17-218 (218)
179 cd03257 ABC_NikE_OppD_transpor 100.0 6.7E-35 1.5E-39 328.7 22.6 194 904-1106 19-228 (228)
180 PRK13643 cbiO cobalt transport 100.0 1.4E-34 3.1E-39 336.4 25.7 225 186-454 19-255 (288)
181 cd03234 ABCG_White The White s 100.0 1.2E-34 2.7E-39 325.9 24.4 204 185-428 19-226 (226)
182 PRK13634 cbiO cobalt transport 100.0 6.2E-35 1.3E-39 339.7 22.6 214 878-1108 3-230 (290)
183 cd03301 ABC_MalK_N The N-termi 100.0 8.8E-35 1.9E-39 324.2 22.8 199 187-428 14-213 (213)
184 TIGR00960 3a0501s02 Type II (G 100.0 8.4E-35 1.8E-39 325.1 22.7 195 186-424 16-216 (216)
185 cd03225 ABC_cobalt_CbiO_domain 100.0 3.8E-35 8.3E-40 326.6 19.7 189 903-1099 14-210 (211)
186 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 1.3E-34 2.7E-39 328.0 24.1 196 903-1108 14-216 (236)
187 cd03233 ABC_PDR_domain1 The pl 100.0 1.1E-34 2.4E-39 320.2 22.9 196 877-1106 3-202 (202)
188 PRK10895 lipopolysaccharide AB 100.0 6.9E-35 1.5E-39 331.3 21.8 197 903-1108 16-221 (241)
189 TIGR03410 urea_trans_UrtE urea 100.0 9.2E-35 2E-39 328.0 22.7 198 903-1109 13-217 (230)
190 PRK13650 cbiO cobalt transport 100.0 2E-34 4.3E-39 333.9 25.9 216 186-445 20-242 (279)
191 PRK10908 cell division protein 100.0 1E-34 2.3E-39 325.7 22.8 192 903-1103 15-216 (222)
192 TIGR01288 nodI ATP-binding ABC 100.0 1E-34 2.2E-39 340.3 23.7 206 186-435 17-224 (303)
193 cd03262 ABC_HisP_GlnQ_permease 100.0 6.8E-35 1.5E-39 325.2 21.0 190 903-1101 13-212 (213)
194 PRK11300 livG leucine/isoleuci 100.0 9.5E-35 2.1E-39 333.0 22.6 211 877-1109 5-239 (255)
195 PRK13651 cobalt transporter AT 100.0 1E-34 2.2E-39 339.1 23.2 215 878-1109 3-250 (305)
196 PRK10619 histidine/lysine/argi 100.0 8.9E-35 1.9E-39 333.4 22.2 209 878-1108 6-236 (257)
197 PRK13636 cbiO cobalt transport 100.0 1.2E-34 2.5E-39 336.5 23.4 212 877-1109 5-227 (283)
198 PRK15079 oligopeptide ABC tran 100.0 2.6E-34 5.7E-39 338.7 26.5 209 185-434 33-250 (331)
199 TIGR00972 3a0107s01c2 phosphat 100.0 1.1E-34 2.3E-39 330.9 22.3 197 903-1108 14-227 (247)
200 PRK13643 cbiO cobalt transport 100.0 1.4E-34 2.9E-39 336.6 23.4 214 878-1109 2-229 (288)
201 cd03218 ABC_YhbG The ABC trans 100.0 1.6E-34 3.4E-39 326.5 23.3 204 186-433 13-220 (232)
202 PRK13631 cbiO cobalt transport 100.0 1.2E-34 2.7E-39 340.3 23.2 214 877-1108 21-260 (320)
203 cd03233 ABC_PDR_domain1 The pl 100.0 2.4E-34 5.1E-39 317.6 24.0 180 184-428 18-202 (202)
204 COG2274 SunT ABC-type bacterio 100.0 2.4E-35 5.2E-40 372.5 18.2 212 874-1108 468-691 (709)
205 PRK13548 hmuV hemin importer A 100.0 1.5E-34 3.3E-39 331.3 23.2 198 903-1109 15-226 (258)
206 TIGR03522 GldA_ABC_ATP gliding 100.0 1.2E-34 2.6E-39 339.2 22.7 205 186-435 15-221 (301)
207 cd03232 ABC_PDR_domain2 The pl 100.0 1.4E-34 3.1E-39 316.8 21.9 189 878-1106 4-192 (192)
208 cd03256 ABC_PhnC_transporter A 100.0 1.8E-34 3.9E-39 328.0 23.4 213 186-433 14-232 (241)
209 cd03266 ABC_NatA_sodium_export 100.0 2E-34 4.3E-39 322.5 23.4 198 187-428 19-218 (218)
210 TIGR02211 LolD_lipo_ex lipopro 100.0 1.5E-34 3.3E-39 324.2 22.4 191 903-1103 18-220 (221)
211 PRK13641 cbiO cobalt transport 100.0 1.5E-34 3.3E-39 336.2 23.2 197 903-1108 20-229 (287)
212 cd03224 ABC_TM1139_LivF_branch 100.0 1.7E-34 3.7E-39 324.0 22.8 203 186-434 13-220 (222)
213 KOG0055 Multidrug/pheromone ex 100.0 5.1E-35 1.1E-39 372.4 20.7 211 183-435 1000-1213(1228)
214 PRK10070 glycine betaine trans 100.0 2E-34 4.2E-39 345.4 24.6 206 186-434 41-253 (400)
215 PRK11124 artP arginine transpo 100.0 2E-34 4.4E-39 327.7 23.5 209 878-1108 3-225 (242)
216 cd03257 ABC_NikE_OppD_transpor 100.0 4.1E-34 8.9E-39 322.3 25.6 201 187-428 19-228 (228)
217 cd03298 ABC_ThiQ_thiamine_tran 100.0 1.3E-34 2.7E-39 322.5 21.1 190 908-1106 16-211 (211)
218 TIGR02315 ABC_phnC phosphonate 100.0 1.5E-34 3.3E-39 329.0 22.1 213 186-433 15-233 (243)
219 TIGR03411 urea_trans_UrtD urea 100.0 1.9E-34 4.1E-39 327.9 22.8 196 903-1108 15-226 (242)
220 PRK13646 cbiO cobalt transport 100.0 1.7E-34 3.7E-39 335.6 22.7 213 878-1108 3-230 (286)
221 PRK13650 cbiO cobalt transport 100.0 1.7E-34 3.8E-39 334.3 22.6 212 877-1108 4-224 (279)
222 cd03263 ABC_subfamily_A The AB 100.0 1.5E-34 3.3E-39 324.0 21.5 203 186-433 15-219 (220)
223 PRK14250 phosphate ABC transpo 100.0 1.8E-34 3.9E-39 327.6 22.1 208 878-1108 4-216 (241)
224 PRK09473 oppD oligopeptide tra 100.0 6.9E-34 1.5E-38 335.4 27.9 213 186-434 29-250 (330)
225 cd03295 ABC_OpuCA_Osmoprotecti 100.0 2.7E-34 5.8E-39 326.6 23.4 206 186-434 14-224 (242)
226 TIGR01978 sufC FeS assembly AT 100.0 2.5E-34 5.3E-39 327.3 23.1 200 903-1108 13-229 (243)
227 TIGR03005 ectoine_ehuA ectoine 100.0 1.6E-34 3.4E-39 330.5 21.6 197 903-1108 13-231 (252)
228 PRK14268 phosphate ABC transpo 100.0 3.2E-34 7E-39 328.9 24.2 214 877-1108 12-237 (258)
229 PRK11831 putative ABC transpor 100.0 3.7E-34 8.1E-39 330.1 24.8 207 186-434 20-232 (269)
230 COG4559 ABC-type hemin transpo 100.0 1.5E-34 3.2E-39 301.4 19.1 207 186-434 14-229 (259)
231 PRK09984 phosphonate/organopho 100.0 2.3E-34 5.1E-39 330.9 23.0 213 877-1109 4-238 (262)
232 PRK14273 phosphate ABC transpo 100.0 3.2E-34 7E-39 328.3 24.0 210 877-1108 7-233 (254)
233 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 2.2E-34 4.8E-39 374.2 25.5 205 186-435 466-673 (686)
234 PRK14247 phosphate ABC transpo 100.0 3.3E-34 7.2E-39 327.5 23.8 214 878-1108 4-229 (250)
235 TIGR02211 LolD_lipo_ex lipopro 100.0 4.5E-34 9.8E-39 320.4 24.4 196 186-425 18-220 (221)
236 PRK14267 phosphate ABC transpo 100.0 2.6E-34 5.7E-39 328.9 22.9 213 878-1108 5-232 (253)
237 PRK13646 cbiO cobalt transport 100.0 4.4E-34 9.5E-39 332.2 24.9 205 186-434 20-234 (286)
238 cd03269 ABC_putative_ATPase Th 100.0 1.7E-34 3.8E-39 321.1 20.6 198 186-428 13-210 (210)
239 cd03260 ABC_PstB_phosphate_tra 100.0 2.2E-34 4.9E-39 324.1 21.7 204 186-432 13-226 (227)
240 TIGR03415 ABC_choXWV_ATP choli 100.0 3E-34 6.6E-39 341.3 23.9 208 184-434 35-253 (382)
241 PRK13644 cbiO cobalt transport 100.0 2.7E-34 5.8E-39 331.9 22.8 196 903-1108 15-219 (274)
242 PRK11231 fecE iron-dicitrate t 100.0 2.1E-34 4.6E-39 329.9 21.7 199 902-1109 14-223 (255)
243 KOG0062 ATPase component of AB 100.0 3.5E-34 7.5E-39 331.8 23.4 204 875-1107 360-563 (582)
244 PRK14242 phosphate transporter 100.0 4.6E-34 1E-38 326.9 24.3 215 876-1108 5-232 (253)
245 PRK10575 iron-hydroxamate tran 100.0 2.2E-34 4.7E-39 331.5 21.7 211 877-1109 11-233 (265)
246 PRK09536 btuD corrinoid ABC tr 100.0 3.6E-34 7.9E-39 343.2 24.3 209 186-434 16-227 (402)
247 PRK15079 oligopeptide ABC tran 100.0 4E-34 8.7E-39 337.2 24.3 224 877-1109 8-247 (331)
248 PRK13635 cbiO cobalt transport 100.0 6.8E-34 1.5E-38 329.2 25.8 216 186-445 20-242 (279)
249 PRK10253 iron-enterobactin tra 100.0 2E-34 4.3E-39 331.9 21.2 211 877-1109 7-229 (265)
250 PRK13638 cbiO cobalt transport 100.0 3E-34 6.5E-39 331.4 22.7 197 903-1108 14-220 (271)
251 cd03268 ABC_BcrA_bacitracin_re 100.0 2.6E-34 5.5E-39 319.3 21.2 195 186-428 13-208 (208)
252 PRK00349 uvrA excinuclease ABC 100.0 7.6E-33 1.6E-37 358.3 38.0 123 977-1108 791-922 (943)
253 PRK13652 cbiO cobalt transport 100.0 3.7E-34 8.1E-39 331.4 23.3 210 878-1108 4-222 (277)
254 TIGR03864 PQQ_ABC_ATP ABC tran 100.0 6.5E-34 1.4E-38 322.2 24.5 206 186-435 14-221 (236)
255 PRK13647 cbiO cobalt transport 100.0 5.4E-34 1.2E-38 329.4 24.2 203 187-433 19-225 (274)
256 PRK13631 cbiO cobalt transport 100.0 1E-33 2.2E-38 332.6 26.9 216 186-446 39-279 (320)
257 PRK14241 phosphate transporter 100.0 5.3E-34 1.1E-38 327.3 23.9 214 878-1108 5-237 (258)
258 PRK14245 phosphate ABC transpo 100.0 5.8E-34 1.3E-38 325.5 24.0 214 877-1108 3-229 (250)
259 PRK13635 cbiO cobalt transport 100.0 3.9E-34 8.3E-39 331.3 22.7 210 878-1108 6-224 (279)
260 PRK10070 glycine betaine trans 100.0 2.6E-34 5.6E-39 344.3 21.9 199 902-1109 40-250 (400)
261 cd03213 ABCG_EPDR ABCG transpo 100.0 5.2E-34 1.1E-38 312.8 22.5 190 877-1106 3-194 (194)
262 PRK11022 dppD dipeptide transp 100.0 1.1E-33 2.4E-38 333.4 26.7 213 186-434 20-242 (326)
263 cd03226 ABC_cobalt_CbiO_domain 100.0 2.5E-34 5.4E-39 318.6 20.0 192 186-425 13-205 (205)
264 COG1245 Predicted ATPase, RNas 100.0 3.8E-33 8.2E-38 317.6 29.8 170 909-1097 360-530 (591)
265 PRK13651 cobalt transporter AT 100.0 5.9E-34 1.3E-38 332.6 24.0 205 186-434 20-253 (305)
266 TIGR01277 thiQ thiamine ABC tr 100.0 4.8E-34 1E-38 318.2 22.2 194 905-1107 13-212 (213)
267 COG1132 MdlB ABC-type multidru 100.0 4E-34 8.7E-39 364.1 24.6 209 185-435 341-552 (567)
268 PRK11308 dppF dipeptide transp 100.0 1.4E-33 3E-38 332.4 27.2 207 186-434 28-243 (327)
269 cd03267 ABC_NatA_like Similar 100.0 6.9E-34 1.5E-38 321.7 23.7 202 184-428 32-236 (236)
270 cd03300 ABC_PotA_N PotA is an 100.0 6.3E-34 1.4E-38 321.4 23.1 197 903-1108 13-215 (232)
271 PRK09493 glnQ glutamine ABC tr 100.0 8.8E-34 1.9E-38 322.0 24.3 205 186-434 14-224 (240)
272 COG4988 CydD ABC-type transpor 100.0 2.5E-34 5.5E-39 342.7 20.7 214 874-1109 317-539 (559)
273 PRK10584 putative ABC transpor 100.0 8.7E-34 1.9E-38 319.6 24.1 209 877-1104 6-226 (228)
274 TIGR03873 F420-0_ABC_ATP propo 100.0 3.9E-34 8.5E-39 327.9 21.5 199 902-1109 13-222 (256)
275 PRK14259 phosphate ABC transpo 100.0 7.1E-34 1.5E-38 327.7 23.7 215 876-1108 12-248 (269)
276 PRK13649 cbiO cobalt transport 100.0 6.2E-34 1.3E-38 330.5 23.3 196 903-1108 20-229 (280)
277 PRK14256 phosphate ABC transpo 100.0 1E-33 2.3E-38 323.8 24.8 213 878-1108 5-231 (252)
278 TIGR03415 ABC_choXWV_ATP choli 100.0 3.9E-34 8.6E-39 340.3 22.0 201 900-1109 34-250 (382)
279 PRK11264 putative amino-acid A 100.0 9.8E-34 2.1E-38 323.7 24.4 204 187-434 17-232 (250)
280 PRK13639 cbiO cobalt transport 100.0 6.5E-34 1.4E-38 329.1 23.2 197 903-1108 15-221 (275)
281 TIGR01184 ntrCD nitrate transp 100.0 3.6E-34 7.7E-39 322.8 20.4 192 906-1108 1-199 (230)
282 cd03267 ABC_NatA_like Similar 100.0 5.5E-34 1.2E-38 322.5 21.9 197 901-1106 32-236 (236)
283 PRK10744 pstB phosphate transp 100.0 6.4E-34 1.4E-38 326.8 22.6 216 874-1108 10-239 (260)
284 TIGR03608 L_ocin_972_ABC putat 100.0 3.9E-34 8.4E-39 317.4 19.9 186 902-1096 10-206 (206)
285 PRK13632 cbiO cobalt transport 100.0 1.2E-33 2.7E-38 326.2 24.8 205 186-434 22-230 (271)
286 PRK10771 thiQ thiamine transpo 100.0 5.5E-34 1.2E-38 322.0 21.2 192 908-1108 17-214 (232)
287 PRK13547 hmuV hemin importer A 100.0 6.4E-34 1.4E-38 327.6 22.0 201 902-1109 13-240 (272)
288 PRK14235 phosphate transporter 100.0 1.2E-33 2.5E-38 325.7 24.0 214 877-1108 19-246 (267)
289 TIGR02142 modC_ABC molybdenum 100.0 5.1E-34 1.1E-38 340.6 21.8 192 908-1108 15-216 (354)
290 PRK10895 lipopolysaccharide AB 100.0 1.2E-33 2.6E-38 321.2 23.8 206 186-434 16-225 (241)
291 PRK11022 dppD dipeptide transp 100.0 1.2E-33 2.5E-38 333.3 24.5 219 878-1109 4-239 (326)
292 TIGR02769 nickel_nikE nickel i 100.0 7.8E-34 1.7E-38 326.9 22.5 197 903-1108 24-235 (265)
293 PRK10584 putative ABC transpor 100.0 1.9E-33 4.1E-38 316.8 25.2 198 186-427 23-227 (228)
294 TIGR03410 urea_trans_UrtE urea 100.0 9E-34 2E-38 319.9 22.6 202 186-433 13-219 (230)
295 PRK00635 excinuclease ABC subu 100.0 2.5E-32 5.3E-37 365.4 40.0 128 974-1109 759-902 (1809)
296 PRK11176 lipid transporter ATP 100.0 6.2E-34 1.4E-38 364.1 23.9 209 186-435 356-567 (582)
297 TIGR00968 3a0106s01 sulfate AB 100.0 1E-33 2.2E-38 320.7 22.9 197 903-1108 13-215 (237)
298 PRK11144 modC molybdate transp 100.0 4.9E-34 1.1E-38 340.2 21.2 191 908-1109 16-214 (352)
299 PRK13648 cbiO cobalt transport 100.0 2.2E-33 4.8E-38 323.9 25.9 215 187-445 23-244 (269)
300 KOG0057 Mitochondrial Fe/S clu 100.0 2.3E-34 5E-39 336.7 17.8 207 876-1108 350-569 (591)
301 PRK13633 cobalt transporter AT 100.0 2.7E-33 5.8E-38 324.8 26.6 205 186-434 23-232 (280)
302 PRK13632 cbiO cobalt transport 100.0 9.9E-34 2.1E-38 327.0 22.8 211 877-1108 7-226 (271)
303 PRK09473 oppD oligopeptide tra 100.0 1.3E-33 2.9E-38 332.9 24.4 220 877-1109 12-247 (330)
304 PRK14237 phosphate transporter 100.0 1.6E-33 3.5E-38 324.5 24.5 217 874-1108 17-246 (267)
305 COG4987 CydC ABC-type transpor 100.0 2.4E-34 5.3E-39 336.5 17.8 211 183-435 348-561 (573)
306 PRK13648 cbiO cobalt transport 100.0 1.1E-33 2.3E-38 326.5 23.0 212 877-1109 7-227 (269)
307 PRK13645 cbiO cobalt transport 100.0 9.5E-34 2.1E-38 330.2 22.7 215 877-1108 6-235 (289)
308 PRK14269 phosphate ABC transpo 100.0 9.3E-34 2E-38 322.9 21.9 201 903-1108 15-225 (246)
309 COG4618 ArpD ABC-type protease 100.0 1E-33 2.2E-38 327.9 22.3 237 128-437 323-562 (580)
310 PRK13543 cytochrome c biogenes 100.0 1.1E-33 2.5E-38 315.2 22.0 200 877-1097 11-211 (214)
311 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 6.9E-34 1.5E-38 371.2 23.6 206 186-435 492-700 (710)
312 PRK13649 cbiO cobalt transport 100.0 3.7E-33 8.1E-38 324.0 27.2 205 186-434 20-233 (280)
313 PRK11247 ssuB aliphatic sulfon 100.0 1E-33 2.2E-38 323.2 21.7 194 187-431 26-219 (257)
314 PRK11248 tauB taurine transpor 100.0 1.6E-33 3.5E-38 322.0 23.5 201 186-431 14-216 (255)
315 cd03297 ABC_ModC_molybdenum_tr 100.0 8.1E-34 1.8E-38 316.6 20.4 194 901-1106 11-214 (214)
316 PRK11308 dppF dipeptide transp 100.0 1.6E-33 3.4E-38 332.0 23.9 221 877-1109 5-240 (327)
317 PRK13633 cobalt transporter AT 100.0 1.1E-33 2.4E-38 328.0 22.1 215 877-1108 4-228 (280)
318 TIGR02769 nickel_nikE nickel i 100.0 2.1E-33 4.6E-38 323.3 24.3 208 185-434 23-239 (265)
319 PRK13636 cbiO cobalt transport 100.0 1.4E-33 3.1E-38 327.4 23.0 207 186-435 19-231 (283)
320 PRK14240 phosphate transporter 100.0 1.9E-33 4.2E-38 321.2 23.8 212 878-1108 4-229 (250)
321 TIGR03005 ectoine_ehuA ectoine 100.0 2.1E-33 4.6E-38 321.2 24.1 206 186-434 13-235 (252)
322 cd03231 ABC_CcmA_heme_exporter 100.0 9.5E-34 2.1E-38 312.8 20.4 185 902-1096 12-198 (201)
323 PRK15093 antimicrobial peptide 100.0 1.8E-33 3.9E-38 332.7 24.1 218 878-1108 4-243 (330)
324 cd03299 ABC_ModC_like Archeal 100.0 1.8E-33 3.9E-38 318.2 23.0 195 905-1108 14-214 (235)
325 PRK13549 xylose transporter AT 100.0 1E-33 2.3E-38 355.1 23.4 214 877-1110 5-229 (506)
326 PRK11144 modC molybdate transp 100.0 1.2E-33 2.5E-38 337.0 22.4 195 191-434 16-217 (352)
327 COG4181 Predicted ABC-type tra 100.0 5.1E-34 1.1E-38 287.0 16.2 195 900-1104 20-226 (228)
328 PRK13640 cbiO cobalt transport 100.0 1.5E-33 3.3E-38 326.9 22.8 213 877-1108 5-227 (282)
329 TIGR02142 modC_ABC molybdenum 100.0 1.8E-33 3.8E-38 336.0 23.9 199 191-434 15-220 (354)
330 cd03292 ABC_FtsE_transporter F 100.0 1.1E-33 2.5E-38 315.5 20.9 195 186-424 14-214 (214)
331 PRK11614 livF leucine/isoleuci 100.0 1.4E-33 3.1E-38 319.7 22.0 203 186-434 18-225 (237)
332 TIGR01184 ntrCD nitrate transp 100.0 1.5E-33 3.3E-38 317.7 21.9 202 189-433 1-202 (230)
333 PRK10790 putative multidrug tr 100.0 1.8E-33 4E-38 360.1 25.6 206 187-435 355-563 (592)
334 PRK11174 cysteine/glutathione 100.0 7E-34 1.5E-38 363.9 21.7 209 877-1108 349-567 (588)
335 PRK10418 nikD nickel transport 100.0 2.5E-33 5.3E-38 320.9 23.9 211 877-1108 4-225 (254)
336 PRK13548 hmuV hemin importer A 100.0 2.1E-33 4.5E-38 321.9 23.3 206 186-434 15-229 (258)
337 PRK14273 phosphate ABC transpo 100.0 5E-33 1.1E-37 318.5 26.4 206 187-434 21-237 (254)
338 PRK14270 phosphate ABC transpo 100.0 2.2E-33 4.9E-38 320.8 23.5 213 877-1108 4-230 (251)
339 PRK13538 cytochrome c biogenes 100.0 1.3E-33 2.7E-38 312.6 20.7 185 903-1096 14-202 (204)
340 PRK14250 phosphate ABC transpo 100.0 2.8E-33 6.1E-38 317.9 24.1 200 187-434 17-220 (241)
341 COG0444 DppD ABC-type dipeptid 100.0 3.1E-33 6.7E-38 313.9 24.0 215 185-434 17-242 (316)
342 TIGR02770 nickel_nikD nickel i 100.0 1.2E-33 2.6E-38 318.7 20.9 197 905-1108 1-210 (230)
343 COG4175 ProV ABC-type proline/ 100.0 7.3E-34 1.6E-38 311.8 18.4 221 186-457 41-268 (386)
344 PRK14274 phosphate ABC transpo 100.0 2.6E-33 5.7E-38 321.7 23.9 213 877-1108 12-238 (259)
345 TIGR02673 FtsE cell division A 100.0 1.5E-33 3.2E-38 314.7 21.2 194 186-423 15-214 (214)
346 PRK11300 livG leucine/isoleuci 100.0 3.1E-33 6.7E-38 320.6 24.3 221 186-434 18-242 (255)
347 TIGR03375 type_I_sec_LssB type 100.0 1.6E-33 3.5E-38 366.6 24.8 208 186-435 478-688 (694)
348 cd03264 ABC_drug_resistance_li 100.0 1.2E-33 2.5E-38 314.7 20.1 196 187-428 14-211 (211)
349 TIGR02770 nickel_nikD nickel i 100.0 2.4E-33 5.3E-38 316.2 22.9 204 188-434 1-214 (230)
350 TIGR00958 3a01208 Conjugate Tr 100.0 1.8E-33 3.9E-38 365.5 25.1 206 186-435 494-702 (711)
351 PRK15093 antimicrobial peptide 100.0 4.2E-33 9E-38 329.6 25.9 217 186-434 20-247 (330)
352 TIGR03411 urea_trans_UrtD urea 100.0 2.6E-33 5.7E-38 318.6 23.3 211 186-433 15-229 (242)
353 TIGR03740 galliderm_ABC gallid 100.0 2.9E-33 6.4E-38 314.2 23.3 197 186-431 13-209 (223)
354 PRK15112 antimicrobial peptide 100.0 1.9E-33 4.1E-38 323.9 22.3 218 878-1108 5-234 (267)
355 PRK14239 phosphate transporter 100.0 2.9E-33 6.3E-38 320.2 23.6 213 877-1108 5-231 (252)
356 TIGR00972 3a0107s01c2 phosphat 100.0 3.9E-33 8.5E-38 318.0 24.4 206 187-434 15-231 (247)
357 PRK11160 cysteine/glutathione 100.0 2.5E-33 5.3E-38 356.5 25.2 207 186-435 353-562 (574)
358 PRK13652 cbiO cobalt transport 100.0 2.8E-33 6.1E-38 324.1 23.5 205 187-434 18-226 (277)
359 COG4525 TauB ABC-type taurine 100.0 9.6E-34 2.1E-38 290.8 17.1 197 903-1109 18-220 (259)
360 PRK13640 cbiO cobalt transport 100.0 3.7E-33 8E-38 323.8 24.3 208 186-434 20-231 (282)
361 PRK14253 phosphate ABC transpo 100.0 3.4E-33 7.3E-38 319.0 23.6 213 878-1108 4-228 (249)
362 PRK13539 cytochrome c biogenes 100.0 2E-33 4.4E-38 311.6 21.1 185 903-1097 15-199 (207)
363 PRK14263 phosphate ABC transpo 100.0 3.9E-33 8.5E-38 319.9 24.1 203 902-1108 20-240 (261)
364 PRK15439 autoinducer 2 ABC tra 100.0 1.5E-33 3.3E-38 353.5 22.5 212 877-1110 11-226 (510)
365 PRK13642 cbiO cobalt transport 100.0 3E-33 6.5E-38 323.9 23.2 212 877-1108 4-224 (277)
366 PRK13641 cbiO cobalt transport 100.0 2.3E-33 4.9E-38 326.4 22.2 205 186-434 20-233 (287)
367 TIGR01978 sufC FeS assembly AT 100.0 4E-33 8.6E-38 317.4 23.8 213 186-434 13-233 (243)
368 PRK14262 phosphate ABC transpo 100.0 3.6E-33 7.7E-38 319.0 23.5 213 878-1108 4-229 (250)
369 PRK14242 phosphate transporter 100.0 8.6E-33 1.9E-37 316.4 26.6 209 187-433 20-235 (253)
370 cd03300 ABC_PotA_N PotA is an 100.0 4.5E-33 9.7E-38 314.5 23.9 206 186-434 13-219 (232)
371 PRK14257 phosphate ABC transpo 100.0 7.7E-33 1.7E-37 326.1 26.8 211 186-434 95-312 (329)
372 KOG0056 Heavy metal exporter H 100.0 3.2E-34 6.8E-39 326.2 14.3 209 185-435 550-761 (790)
373 cd03298 ABC_ThiQ_thiamine_tran 100.0 2.6E-33 5.7E-38 311.9 21.5 195 191-428 16-211 (211)
374 TIGR01193 bacteriocin_ABC ABC- 100.0 2.5E-33 5.4E-38 365.6 24.9 208 186-435 487-697 (708)
375 PRK14260 phosphate ABC transpo 100.0 3.4E-33 7.3E-38 320.7 22.9 214 877-1108 7-238 (259)
376 PRK13645 cbiO cobalt transport 100.0 4.6E-33 1E-37 324.4 24.3 206 186-434 24-239 (289)
377 PRK14265 phosphate ABC transpo 100.0 5E-33 1.1E-37 321.4 24.3 216 875-1108 18-253 (274)
378 PRK14236 phosphate transporter 100.0 4.7E-33 1E-37 321.5 24.1 215 876-1108 24-251 (272)
379 COG0444 DppD ABC-type dipeptid 100.0 3.5E-33 7.5E-38 313.5 22.2 204 902-1109 17-239 (316)
380 PRK13644 cbiO cobalt transport 100.0 3.1E-33 6.8E-38 323.0 22.6 203 187-434 16-223 (274)
381 PRK14258 phosphate ABC transpo 100.0 4.8E-33 1E-37 319.7 24.0 216 877-1108 7-240 (261)
382 PRK14272 phosphate ABC transpo 100.0 5.5E-33 1.2E-37 317.9 24.4 214 877-1108 4-231 (252)
383 TIGR01189 ccmA heme ABC export 100.0 2.1E-33 4.6E-38 309.4 20.2 183 902-1094 12-196 (198)
384 TIGR03797 NHPM_micro_ABC2 NHPM 100.0 1.2E-33 2.6E-38 367.4 21.3 208 877-1108 451-668 (686)
385 cd03299 ABC_ModC_like Archeal 100.0 5.3E-33 1.1E-37 314.4 23.6 204 188-434 14-218 (235)
386 cd03230 ABC_DR_subfamily_A Thi 100.0 2.5E-33 5.3E-38 302.0 19.9 157 903-1099 13-171 (173)
387 PRK14247 phosphate ABC transpo 100.0 5.8E-33 1.2E-37 317.3 24.1 209 186-434 16-233 (250)
388 COG4525 TauB ABC-type taurine 100.0 4.6E-33 9.9E-38 285.8 20.7 206 186-436 18-225 (259)
389 cd03225 ABC_cobalt_CbiO_domain 100.0 2.5E-33 5.4E-38 312.1 20.5 194 186-423 14-211 (211)
390 PRK10762 D-ribose transporter 100.0 1.8E-33 3.8E-38 352.6 21.7 211 878-1110 5-227 (501)
391 PRK14257 phosphate ABC transpo 100.0 5.1E-33 1.1E-37 327.6 24.1 216 877-1108 80-308 (329)
392 PRK10908 cell division protein 100.0 3.8E-33 8.3E-38 313.0 21.9 196 186-425 15-216 (222)
393 PRK10247 putative ABC transpor 100.0 3.1E-33 6.7E-38 314.2 21.1 201 877-1100 7-214 (225)
394 PRK11701 phnK phosphonate C-P 100.0 4.7E-33 1E-37 319.4 23.0 210 877-1108 6-236 (258)
395 PRK14244 phosphate ABC transpo 100.0 2.2E-33 4.7E-38 320.9 20.2 201 903-1108 18-232 (251)
396 COG4181 Predicted ABC-type tra 100.0 2.4E-33 5.2E-38 282.2 17.9 202 181-426 18-226 (228)
397 cd03245 ABCC_bacteriocin_expor 100.0 3E-33 6.6E-38 313.4 21.0 195 903-1106 17-220 (220)
398 PRK10619 histidine/lysine/argi 100.0 6.4E-33 1.4E-37 318.1 24.1 205 186-434 18-240 (257)
399 PRK14248 phosphate ABC transpo 100.0 6.2E-33 1.3E-37 320.1 24.0 210 877-1108 21-247 (268)
400 PRK15112 antimicrobial peptide 100.0 5.9E-33 1.3E-37 319.9 23.7 207 186-434 26-238 (267)
401 PRK14268 phosphate ABC transpo 100.0 5.7E-33 1.2E-37 318.6 23.5 205 186-433 25-240 (258)
402 PRK15056 manganese/iron transp 100.0 2.9E-33 6.2E-38 323.3 21.2 211 877-1109 6-226 (272)
403 PRK13642 cbiO cobalt transport 100.0 1E-32 2.2E-37 319.4 25.8 205 186-434 20-228 (277)
404 PRK10575 iron-hydroxamate tran 100.0 5.1E-33 1.1E-37 320.2 23.1 209 186-433 24-235 (265)
405 PRK11124 artP arginine transpo 100.0 4.6E-33 9.9E-38 316.6 22.4 203 187-433 16-228 (242)
406 PRK14249 phosphate ABC transpo 100.0 6.8E-33 1.5E-37 316.8 23.8 213 878-1108 5-230 (251)
407 PRK14271 phosphate ABC transpo 100.0 9.9E-33 2.1E-37 319.0 25.4 215 877-1109 21-247 (276)
408 TIGR02982 heterocyst_DevA ABC 100.0 4.2E-33 9.2E-38 312.2 21.7 190 903-1102 18-219 (220)
409 PRK10418 nikD nickel transport 100.0 1.4E-32 3E-37 314.7 26.4 206 187-434 17-229 (254)
410 TIGR00968 3a0106s01 sulfate AB 100.0 7.9E-33 1.7E-37 313.4 24.0 206 186-434 13-219 (237)
411 PRK14254 phosphate ABC transpo 100.0 5.6E-33 1.2E-37 322.3 23.3 213 877-1108 39-264 (285)
412 PRK10253 iron-enterobactin tra 100.0 5.5E-33 1.2E-37 319.9 23.0 210 186-434 20-232 (265)
413 PRK13639 cbiO cobalt transport 100.0 7.9E-33 1.7E-37 320.0 24.4 204 187-434 16-225 (275)
414 PRK14275 phosphate ABC transpo 100.0 6.9E-33 1.5E-37 321.9 23.9 213 877-1108 39-265 (286)
415 PRK10771 thiQ thiamine transpo 100.0 6.4E-33 1.4E-37 313.3 22.9 201 191-434 17-218 (232)
416 PRK14261 phosphate ABC transpo 100.0 7.6E-33 1.6E-37 316.8 23.8 213 877-1108 6-232 (253)
417 COG4175 ProV ABC-type proline/ 100.0 1.1E-33 2.3E-38 310.5 15.9 199 903-1110 41-251 (386)
418 PRK14267 phosphate ABC transpo 100.0 7.4E-33 1.6E-37 317.0 23.3 208 187-434 18-236 (253)
419 PRK14255 phosphate ABC transpo 100.0 1.1E-32 2.4E-37 315.4 24.6 213 877-1108 5-231 (252)
420 cd03235 ABC_Metallic_Cations A 100.0 3.7E-33 8.1E-38 311.1 20.2 200 186-428 12-213 (213)
421 PRK13638 cbiO cobalt transport 100.0 8.7E-33 1.9E-37 319.3 24.0 205 186-434 14-224 (271)
422 TIGR01842 type_I_sec_PrtD type 100.0 1.1E-32 2.4E-37 349.1 27.1 208 186-434 331-541 (544)
423 cd03252 ABCC_Hemolysin The ABC 100.0 3.5E-33 7.7E-38 316.5 20.3 197 903-1108 15-220 (237)
424 PRK03695 vitamin B12-transport 100.0 4.7E-33 1E-37 317.2 21.2 195 905-1109 11-218 (248)
425 PRK09984 phosphonate/organopho 100.0 6.2E-33 1.4E-37 319.1 22.4 216 186-433 17-240 (262)
426 TIGR00630 uvra excinuclease AB 100.0 1.3E-31 2.9E-36 346.2 37.3 123 977-1108 789-920 (924)
427 PRK14243 phosphate transporter 100.0 6.7E-33 1.5E-37 318.8 22.6 215 877-1108 10-243 (264)
428 cd03213 ABCG_EPDR ABCG transpo 100.0 1.3E-32 2.7E-37 301.9 23.7 171 186-428 22-194 (194)
429 cd03220 ABC_KpsT_Wzt ABC_KpsT_ 100.0 5.8E-33 1.3E-37 311.5 21.5 190 899-1106 31-224 (224)
430 PRK10744 pstB phosphate transp 100.0 1.8E-32 4E-37 314.8 26.1 206 187-434 27-243 (260)
431 PRK09700 D-allose transporter 100.0 3.2E-33 6.9E-38 351.3 21.6 212 877-1110 5-231 (510)
432 PRK14251 phosphate ABC transpo 100.0 8.8E-33 1.9E-37 316.0 23.3 214 877-1108 4-230 (251)
433 PRK11231 fecE iron-dicitrate t 100.0 6E-33 1.3E-37 317.9 21.9 208 186-433 15-225 (255)
434 COG4604 CeuD ABC-type enteroch 100.0 3.4E-34 7.5E-39 294.9 9.9 203 899-1110 10-222 (252)
435 TIGR02982 heterocyst_DevA ABC 100.0 1.9E-32 4.2E-37 306.9 24.8 196 186-424 18-219 (220)
436 TIGR01166 cbiO cobalt transpor 100.0 3.9E-33 8.4E-38 305.3 18.4 175 902-1083 4-188 (190)
437 cd03229 ABC_Class3 This class 100.0 4.2E-33 9.1E-38 301.6 18.4 159 903-1099 13-177 (178)
438 cd03262 ABC_HisP_GlnQ_permease 100.0 6.6E-33 1.4E-37 309.2 20.6 195 186-424 13-213 (213)
439 PRK14238 phosphate transporter 100.0 1.3E-32 2.8E-37 317.5 23.7 213 877-1108 24-250 (271)
440 PRK10790 putative multidrug tr 100.0 4.3E-33 9.3E-38 356.7 21.7 209 877-1108 340-558 (592)
441 cd03252 ABCC_Hemolysin The ABC 100.0 1.2E-32 2.7E-37 312.1 23.0 205 186-434 15-224 (237)
442 TIGR01277 thiQ thiamine ABC tr 100.0 1.3E-32 2.8E-37 306.7 22.7 199 188-429 13-212 (213)
443 PRK10419 nikE nickel transport 100.0 7.7E-33 1.7E-37 318.9 21.5 199 903-1110 25-238 (268)
444 PRK11176 lipid transporter ATP 100.0 3.3E-33 7.2E-38 357.4 20.4 212 877-1108 341-562 (582)
445 PRK14237 phosphate transporter 100.0 3.7E-32 7.9E-37 313.3 27.0 211 186-434 33-250 (267)
446 TIGR02633 xylG D-xylose ABC tr 100.0 8.8E-33 1.9E-37 346.7 23.8 202 902-1110 13-227 (500)
447 PRK13540 cytochrome c biogenes 100.0 6.6E-33 1.4E-37 305.9 19.9 182 903-1094 14-197 (200)
448 cd03289 ABCC_CFTR2 The CFTR su 100.0 7.2E-33 1.6E-37 318.3 20.9 210 878-1109 3-221 (275)
449 PTZ00265 multidrug resistance 100.0 4.2E-33 9.1E-38 380.8 22.3 213 186-435 1181-1452(1466)
450 TIGR03873 F420-0_ABC_ATP propo 100.0 1.3E-32 2.9E-37 315.3 22.9 208 186-433 14-224 (256)
451 PRK14235 phosphate transporter 100.0 1.8E-32 3.8E-37 315.9 23.7 211 187-434 33-250 (267)
452 CHL00131 ycf16 sulfate ABC tra 100.0 2E-32 4.4E-37 313.2 24.0 214 877-1109 7-237 (252)
453 COG1132 MdlB ABC-type multidru 100.0 3.8E-33 8.2E-38 355.2 19.9 211 876-1108 327-547 (567)
454 PRK11701 phnK phosphonate C-P 100.0 2.2E-32 4.7E-37 313.9 24.1 206 187-434 20-240 (258)
455 TIGR02323 CP_lyasePhnK phospho 100.0 1.6E-32 3.5E-37 314.2 23.0 209 878-1108 4-233 (253)
456 PRK14245 phosphate ABC transpo 100.0 1.9E-32 4.2E-37 312.9 23.5 210 186-434 16-233 (250)
457 cd03254 ABCC_Glucan_exporter_l 100.0 8E-33 1.7E-37 312.0 20.0 197 903-1108 16-221 (229)
458 PRK14241 phosphate transporter 100.0 2.2E-32 4.8E-37 313.8 23.9 207 187-434 18-241 (258)
459 PRK14270 phosphate ABC transpo 100.0 2.6E-32 5.6E-37 312.1 24.3 207 186-434 17-234 (251)
460 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 7.5E-33 1.6E-37 314.0 19.5 197 903-1108 16-221 (238)
461 PRK14248 phosphate ABC transpo 100.0 6.8E-32 1.5E-36 311.4 27.7 204 186-434 34-251 (268)
462 cd03232 ABC_PDR_domain2 The pl 100.0 2.5E-32 5.5E-37 299.1 22.9 170 186-428 20-192 (192)
463 PRK14269 phosphate ABC transpo 100.0 2.6E-32 5.7E-37 311.0 23.8 212 186-434 15-229 (246)
464 TIGR03796 NHPM_micro_ABC1 NHPM 100.0 5.1E-33 1.1E-37 363.1 20.3 210 876-1108 476-695 (710)
465 PRK14274 phosphate ABC transpo 100.0 2.8E-32 6.2E-37 313.1 24.1 210 187-434 26-242 (259)
466 PRK14256 phosphate ABC transpo 100.0 3.7E-32 8E-37 311.0 24.9 208 186-434 17-235 (252)
467 PRK11160 cysteine/glutathione 100.0 7.1E-33 1.5E-37 352.3 20.9 212 876-1108 337-557 (574)
468 PRK13546 teichoic acids export 100.0 3.7E-32 8E-37 311.4 24.7 201 901-1120 35-239 (264)
469 COG4598 HisP ABC-type histidin 100.0 3.1E-33 6.8E-38 282.9 13.6 205 899-1109 15-237 (256)
470 PRK10982 galactose/methyl gala 100.0 9E-33 2E-37 345.6 21.1 200 902-1110 10-220 (491)
471 PRK14266 phosphate ABC transpo 100.0 2.6E-32 5.6E-37 311.9 23.1 213 878-1108 4-229 (250)
472 COG4148 ModC ABC-type molybdat 100.0 3.1E-33 6.7E-38 301.8 14.4 195 191-434 16-217 (352)
473 PRK14239 phosphate transporter 100.0 4.3E-32 9.4E-37 310.5 24.8 210 187-434 19-235 (252)
474 PRK14246 phosphate ABC transpo 100.0 3.1E-32 6.7E-37 311.8 23.6 213 878-1108 11-236 (257)
475 TIGR01846 type_I_sec_HlyB type 100.0 1.6E-32 3.6E-37 356.9 24.2 208 186-435 470-680 (694)
476 cd03297 ABC_ModC_molybdenum_tr 100.0 2E-32 4.4E-37 305.4 21.5 192 191-428 16-214 (214)
477 PRK11288 araG L-arabinose tran 100.0 1.5E-32 3.2E-37 344.3 22.9 208 878-1107 5-223 (501)
478 TIGR01193 bacteriocin_ABC ABC- 100.0 6.5E-33 1.4E-37 361.7 20.4 210 877-1108 473-692 (708)
479 PRK14259 phosphate ABC transpo 100.0 3.7E-32 8E-37 313.4 24.2 205 186-434 26-252 (269)
480 COG4987 CydC ABC-type transpor 100.0 3.2E-33 7E-38 327.1 15.4 211 877-1108 336-556 (573)
481 KOG0066 eIF2-interacting prote 100.0 1.6E-31 3.5E-36 299.9 28.3 201 875-1108 584-786 (807)
482 cd03251 ABCC_MsbA MsbA is an e 100.0 1.1E-32 2.4E-37 311.9 19.1 195 904-1108 16-220 (234)
483 PRK09544 znuC high-affinity zi 100.0 2.4E-32 5.3E-37 311.2 22.0 197 878-1108 5-204 (251)
484 PRK14252 phosphate ABC transpo 100.0 3.2E-32 6.9E-37 313.7 23.2 214 876-1108 15-244 (265)
485 cd03215 ABC_Carb_Monos_II This 100.0 1.1E-32 2.4E-37 299.4 18.1 159 905-1099 15-180 (182)
486 PRK13547 hmuV hemin importer A 100.0 3.3E-32 7.2E-37 313.4 23.0 212 186-433 14-242 (272)
487 PRK09580 sufC cysteine desulfu 100.0 3.8E-32 8.2E-37 310.3 23.1 200 903-1108 14-230 (248)
488 PRK14244 phosphate ABC transpo 100.0 4.1E-32 8.9E-37 310.4 23.4 212 186-434 18-236 (251)
489 PRK10789 putative multidrug tr 100.0 3.6E-32 7.7E-37 345.8 25.3 208 186-435 328-538 (569)
490 PRK10419 nikE nickel transport 100.0 4.2E-32 9E-37 312.8 23.5 207 186-434 25-240 (268)
491 TIGR02203 MsbA_lipidA lipid A 100.0 2.2E-32 4.7E-37 349.5 23.3 208 186-434 345-555 (571)
492 PRK14264 phosphate ABC transpo 100.0 3.5E-32 7.5E-37 318.8 23.1 214 877-1108 45-284 (305)
493 PRK14262 phosphate ABC transpo 100.0 5.2E-32 1.1E-36 309.5 23.9 211 186-434 16-233 (250)
494 PRK13657 cyclic beta-1,2-gluca 100.0 3.3E-32 7.2E-37 348.1 24.8 207 187-435 349-558 (588)
495 cd03217 ABC_FeS_Assembly ABC-t 100.0 3E-32 6.5E-37 300.5 20.9 172 903-1108 13-189 (200)
496 TIGR03375 type_I_sec_LssB type 100.0 1.2E-32 2.6E-37 358.5 20.7 212 876-1108 462-683 (694)
497 cd03249 ABC_MTABC3_MDL1_MDL2 M 100.0 3.9E-32 8.4E-37 308.2 22.2 206 186-435 16-226 (238)
498 PRK14272 phosphate ABC transpo 100.0 8E-32 1.7E-36 308.3 24.8 208 186-434 17-235 (252)
499 PRK14240 phosphate transporter 100.0 7.4E-32 1.6E-36 308.2 24.4 206 187-434 17-233 (250)
500 PRK14265 phosphate ABC transpo 100.0 8.1E-32 1.8E-36 311.3 24.8 204 187-434 34-257 (274)
No 1
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.4e-257 Score=2380.27 Aligned_cols=1341 Identities=53% Similarity=0.910 Sum_probs=1251.6
Q ss_pred ccchhhhhHHHHhhCCChhhhhhhhhccccccCCccccccccCCCCchhhHHHHHHHHhhhhhcHHHHHHHHHHHHhhcC
Q 045902 53 EEDEEELKWAAIERLPTYDRVRKTMLKHVLENGRIGYEEVDVSELGMQDKKNLLESILKVVEEDNEKFLLRLRERTDRVG 132 (1472)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (1472)
+||||+|||||+|||||++| +++.+. .++ ++|+.++++++++.+.++..+..++|+|+++.++++|++++
T Consensus 12 ~~~e~~~~~a~~~~~pt~~~---~~~~~~-~~~-----~~d~~~~~~~~~~~~~~~~~~~~~~d~~~~l~~~r~~~~~~- 81 (1391)
T KOG0065|consen 12 DEDEEALRWAAIERLPTFDR---SLLRSI-FES-----EVDVTKLDPDDDPKFIEKSSKHWEQDNEKLLEKLRERIDRV- 81 (1391)
T ss_pred chhHHHHHHHHHhcCccccc---hhhhhh-ccC-----cccccCCCcccchhHHHHhHHHHhhhHHHHHHHHHhhcCcc-
Confidence 46999999999999999999 655532 112 58999999999999999999999999999999999999999
Q ss_pred CCCCcceEEEeeeEEEEEEecCCCcCCChhHhHHHHHHhhhhhcccccCCcccceeeeceeeEEeCCeEEEEEcCCCCcH
Q 045902 133 IEIPKIEVRFENLSIEGDAYVGTRALPTLLNTSLNAIEGVLGFLRLFPSKKRKLEILHDVSGIVKPSRMTLLLGPPGSGK 212 (1472)
Q Consensus 133 ~~~p~~~v~f~~L~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~ilGp~GsGK 212 (1472)
++|.++++++++.+++++..+ ||++|...+.++.+++..+.. ++.+..||+|+||.++||||++++|||||||
T Consensus 82 -~~p~~~~~~~~~gv~a~~~~~----~t~~n~~~~~~~~~~~~~~~~--~~~~~~il~~~sg~~~pg~m~lvLG~pgsG~ 154 (1391)
T KOG0065|consen 82 -ELPTIEVRFSALGVEADVTYG----PTLVNILSNPLESILRMLGKR--KKKKIQILKDISGIIKPGEMTLVLGPPGSGK 154 (1391)
T ss_pred -cCCceEEEeeecccccccccc----hhhhhhhhhHHHHHhhhcccc--ccccceeecCcceeEcCCceEEEecCCCCch
Confidence 899999999999999998866 999999999999887666543 5566789999999999999999999999999
Q ss_pred HHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHH
Q 045902 213 TTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREK 292 (1472)
Q Consensus 213 STLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~ 292 (1472)
||||++|+|.++......|+|+|||++.+++.+++.++|++|+|.|+|+|||||||+|+++|++++.|++ +.+|+++
T Consensus 155 ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lTVreTldFa~rck~~~~r~~---~~~R~e~ 231 (1391)
T KOG0065|consen 155 TTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELTVRETLDFAARCKGPGSRYD---EVSRREK 231 (1391)
T ss_pred HHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeEEeehhhHHHhccCCccccc---cccHHHH
Confidence 9999999999998777789999999999999999999999999999999999999999999999998876 5556655
Q ss_pred hcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCC
Q 045902 293 DAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEIS 372 (1472)
Q Consensus 293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEpt 372 (1472)
+. ..+|++++++||++|+||+|||+++||+||||||||+||++++++++++||||+|
T Consensus 232 ~~-----------------------~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~De~t 288 (1391)
T KOG0065|consen 232 LA-----------------------AMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWDEIT 288 (1391)
T ss_pred HH-----------------------HHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeeeccc
Confidence 32 1579999999999999999999999999999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChHH
Q 045902 373 TGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQGPREYVLDFFESVGFRCPERKGAAD 452 (1472)
Q Consensus 373 sgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~ad 452 (1472)
+|||++|+.+++++||+++|..+.|++++++||+++++++||+|++|++|+++|+||++++++||+++||.||+++++||
T Consensus 289 ~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~eG~~iy~Gp~d~~~~yFe~~Gf~cP~r~~~AD 368 (1391)
T KOG0065|consen 289 RGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSEGYQIYQGPRDEVLPYFEDMGFKCPPRKGTAD 368 (1391)
T ss_pred ccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeeccceEEeccHHHHHHHHHhcCccCCCccCHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhcCCCCCCCCCCCCCCcCcccccHHHHHHHHHHH
Q 045902 453 FLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELRVPYDKSKTHPAGLVKKRYGISNWELFKTCFAR 532 (1472)
Q Consensus 453 fl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R 532 (1472)
|++++++++++.++|..+..|+.+.+++||.+.|++++.++++..+++.++++++.++.++..++|.+++|+|+++|+.|
T Consensus 369 fLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~~~qvk~c~~R 448 (1391)
T KOG0065|consen 369 FLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPYWEQVKACTIR 448 (1391)
T ss_pred HHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhc
Q 045902 533 EWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYGALFFSLVNVMFNGMAELALTIVRLPAFYKQRD 612 (1472)
Q Consensus 533 ~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~ 612 (1472)
+|++++||.+++++++++.+++|+++|++|+++++ ++..++..+.|++||++++.+|++++|+.+++.++|||+|||+
T Consensus 449 ~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~~~~~~~pv~~Khr~ 526 (1391)
T KOG0065|consen 449 EFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIALTFQRLPVFYKHRD 526 (1391)
T ss_pred HHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHHHHHhhcchHHHhhc
Confidence 99999999999999999999999999999999985 5566788899999999999999999999999999999999999
Q ss_pred CCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHH
Q 045902 613 FLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQLLAFFSVHQMGLSLFRFIAAVSRTQVVANTLG 692 (1472)
Q Consensus 613 ~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~ 692 (1472)
..|||+||+++|.+++++|.+++++++|.+|+||++|+.+++++||++++++|+++++++++||+++++++++.+|+++|
T Consensus 527 ~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l~~t~~~An~~g 606 (1391)
T KOG0065|consen 527 LSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASLSRTLSIANLIG 606 (1391)
T ss_pred ccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchHHHHhhHh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCCCCCCCCCCCcc-----------cCCcchHHHH
Q 045902 693 TFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDERWSAPNPARFL-----------VDEPTVGKAL 761 (1472)
Q Consensus 693 ~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~~~~~~~~~~~~-----------~~~~~~G~~~ 761 (1472)
++.++++.+++||+||..+||+||+|++|+||++|+++++++|||++++|+|.+.++.. ....+.|..+
T Consensus 607 ~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c~~~~~~~G~~~ 686 (1391)
T KOG0065|consen 607 GILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVCAATGATLGNDY 686 (1391)
T ss_pred HHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccchhhccccCceE
Confidence 99999999999999999999999999999999999999999999999999997322110 1346789999
Q ss_pred HhhcCCc-----ccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCcccccChhhhhhhcccCCC
Q 045902 762 LKARGMY-----TEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSKKQSNSHAQQNMRAADMS 836 (1472)
Q Consensus 762 L~~~~~~-----~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 836 (1472)
++.+++. ...+|+|+++|+++||.++|++++++++.|+++..+.++.+..++.+.+...... +..
T Consensus 687 v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~~~~~~~l~~~~~~~~~~~~~~----------~~~ 756 (1391)
T KOG0065|consen 687 VSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPLKKSGAILVFKKGKEKKKVKSA----------GSS 756 (1391)
T ss_pred EecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCccccccceeeeccchhhhcchhc----------ccc
Confidence 9999887 7888999999999999999999999999999999988887766554433211100 000
Q ss_pred CCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCC
Q 045902 837 PPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPG 916 (1472)
Q Consensus 837 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~G 916 (1472)
.. .+.. . ...+...++++.|+++..++++|+.|.+++|.+++..| +++++|+|||+.++||
T Consensus 757 ~~--------~~~~------~--~s~~~~~~~~~~~~~~~~~~~~~V~~w~dl~~~~~~qG---~~~qLL~~V~G~~kPG 817 (1391)
T KOG0065|consen 757 SE--------IEKL------D--DSSHQEKNKMVLPFTPLSLTFKDVFYWVDLPYEMPIQG---GTRQLLNNVSGAFKPG 817 (1391)
T ss_pred cc--------cccc------c--cccccccccccCCCccccccccceEEEEeCCccccccc---cceEhhhcCceEecCC
Confidence 00 0000 0 01111355778899999999999999999998887776 6789999999999999
Q ss_pred eEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCch-
Q 045902 917 VLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKD- 995 (1472)
Q Consensus 917 e~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~- 995 (1472)
.+|||||+||||||||||+|+||++.|.++|+|.+||+|++++.++|++|||+|+|.|.+.+||+|.|.|+|+||+|++
T Consensus 818 ~LTALMG~SGAGKTTLLdvLA~R~t~G~I~Gdi~i~G~p~~q~tF~R~~GYvqQ~DiH~~~~TVrESL~fSA~LRlp~~v 897 (1391)
T KOG0065|consen 818 VLTALMGESGAGKTTLLDVLAGRKTGGYIEGDILISGFPKDQETFARVSGYVEQQDIHSPELTVRESLRFSAALRLPKEV 897 (1391)
T ss_pred ceeehhcCCCCchHHHHHHHhcCcccceEEeEEEECCeeCchhhhccccceeecccccCcccchHHHHHHHHHHcCCCcC
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999999998764
Q ss_pred ------HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCC-CCccccCCCCCCCHHHHHHHHHHHHHH
Q 045902 996 ------MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANP-SIIFMDEPTSGLDARAAAIVMRTVRNT 1068 (1472)
Q Consensus 996 ------~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p-~il~LDEPTsgLD~~~~~~i~~~l~~l 1068 (1472)
+++|+|++.|||.+++|.++|.|| +|||.+|||||+||+||++|| .||||||||||||++++..|++.+|++
T Consensus 898 ~~~ek~~yVe~Vi~lleL~~~~daiVG~~G-~GLs~eQRKrLTIgVELvA~P~~ilFLDEPTSGLDsqaA~~i~~~lrkl 976 (1391)
T KOG0065|consen 898 SDEEKYEYVEEVIELLELKEYADALVGLPG-SGLSTEQRKRLTIGVELVANPSSILFLDEPTSGLDSQAAAIVMRFLRKL 976 (1391)
T ss_pred CHHHHHHHHHHHHHHhCchhhhhhhccCCC-CCCCHHHhceeeEEEEEecCCceeEEecCCCCCccHHHHHHHHHHHHHH
Confidence 679999999999999999999999 999999999999999999999 889999999999999999999999999
Q ss_pred hhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCCCCCCCCCCCcceEEEecchhhhh
Q 045902 1069 VDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGRQSHKLVEYFEAVPGVPKIRDGYNPATWVLEVSSNAVET 1148 (1472)
Q Consensus 1069 ~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~ 1148 (1472)
+++|+|||||+||||.++++.||++++|++||+++|+||+|++++++++||++++|+++ ++..||||||||+++.+.+.
T Consensus 977 a~tGqtIlCTIHQPS~~ife~FD~LLLLkrGGqtVY~G~lG~~s~~li~YFes~~~~~~-~~~~NPA~~mLevi~~~~~~ 1055 (1391)
T KOG0065|consen 977 ADTGQTILCTIHQPSIDIFEAFDELLLLKRGGQTVYFGPLGENSSKLIEYFESIGGVKC-ISDENPAEWMLEVIGAGAEA 1055 (1391)
T ss_pred HhcCCeEEEEecCCcHHHHHHHhHHHHHhcCCeEEEecCcccccHHHHHHHHhcCCccC-CCCCChHHHHHhhccccccc
Confidence 99999999999999999999999999999999999999999999999999999988864 44459999999999998888
Q ss_pred hhchhHHHHHhhcHHHHHHHHHHHhhcCCCCC-CCCCcccccccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHH
Q 045902 1149 QLNVDFAAIYADSDLYRRNQQLIKELSSPAPG-SKDLYFTTKYSQDFITQCKTCFWKQHWSYWRNPKYNAIRFFLTTVIG 1227 (1472)
Q Consensus 1149 ~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~ 1227 (1472)
+.+.||+++|++|++++++++++++++.++++ ..+..++++|++|+|.|++.|+|||+++|||+|+|+.+|++++++.|
T Consensus 1056 ~~~~D~a~~w~~S~e~k~~~e~v~~l~~~~~~~~~~~~~~~~fa~s~~~Q~k~~l~Rq~~syWRsp~y~~ar~~~~i~~g 1135 (1391)
T KOG0065|consen 1056 SLSVDFAEIWKNSEEYKRNKELVKELSQPPPGFSTDLEFKTRFAQSLWYQFKLCLWRQFLSYWRSPDYLMARFALTIVAG 1135 (1391)
T ss_pred ccCccHHHHHhccHHHHHHHHHHHHHhcCCccCCcccccccccchhHHHHHHHHHHHHHHHHhCCcHHHHHHHHHHHHHH
Confidence 88999999999999999999999999999988 78888999999999999999999999999999999999999999999
Q ss_pred HHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhHhHhHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHH
Q 045902 1228 ALFGMIFWDKGEKTSKEQDLINLLGAMYSAVLFLGASNASSVTSVVAIERTVFYRERAAGMYSSLTYAFAQVSIEAIYVS 1307 (1472)
Q Consensus 1228 l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~l~e~P~~~ 1307 (1472)
|++|++||+.|+ ++||++|.+|++|+++++.+.+++..++|.+..||.++|||+++|||||.||++||+++|+||.+
T Consensus 1136 l~iGf~F~~~g~---~~q~lqn~m~a~yma~v~~~~~~~~~~~~~v~~e~~y~~RE~~s~mYs~~~~~~aq~~vEiP~~l 1212 (1391)
T KOG0065|consen 1136 LFIGFTFWKVGH---NVQGLQNAMGAAYMATVFSGPNNNQLQQPAVATERLYEYRERASNMYSWTPFALAQVLVEIPYNL 1212 (1391)
T ss_pred HhheeeeeecCC---cHHHHHHHHHHHHHHHHHhhhhhhhhhhhHHhhhhhheeeecccCcccHHHHHHHHHHHHHHHHH
Confidence 999999999995 78999999999999999999999888999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhhhhccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccc
Q 045902 1308 IQTIVYSLLLYSMIGFHWEVTKFLWFYFFMLMCFMYFTLYGMMLVALTPNQQIATILMSFFLSFWNLFSGFMVPRTQIPI 1387 (1472)
Q Consensus 1308 ~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~ 1387 (1472)
+++++|++|+|+|+||++++.+|+||+++++++.+|++++|||+++++||.++|+++++++++++++||||++|++.||.
T Consensus 1213 ~~stl~~~~~Y~~iGF~~~a~~~~~f~~~~~~f~lYf~~~Gmm~~s~tPn~~~Aav~~s~~~s~~~~F~G~l~p~~~iP~ 1292 (1391)
T KOG0065|consen 1213 LQSTLFFLITYYPIGFYWTASKFFWFLLFMFIFFLYFTTLGMMLVSLTPNLQTAAVIASLFFSFWNLFSGFLQPRSLIPK 1292 (1391)
T ss_pred HHHHHhheeeeeeccchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHHHHHHHHHHHHHhcccccccccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhhhhhCHHHHHHHHHHHHhhCCccceeeccC------CCcccHHHHHHhhcC----CccCchhHHHHHHHHHHHHHH
Q 045902 1388 WWRWYYWASPVAWTIYGLVTSQIGDKVSEVEVAG------ESGITVKEYLYKHYG----YDYDFLGAVAAAHIGFVVLFF 1457 (1472)
Q Consensus 1388 ~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~~~~------~~~~~~~~~l~~~~g----~~~~~~~~~~~il~~~~~~f~ 1457 (1472)
||+||||+||++|.++|++..++||.+..|...+ +.++||++|++++|| |.+|.......+..+|.+++.
T Consensus 1293 fW~wmy~lsP~ty~l~gli~~~~~d~~v~c~~~e~~~~~pp~g~tcge~m~~~~~~~~Gy~~n~~a~~~c~~c~y~v~~~ 1372 (1391)
T KOG0065|consen 1293 FWIWMYYLSPVTYTLEGLISSQLGDVEVTCEDSEMNYFDPPSGQTCGEFMEDFFGEGTGYLHNPLATTACVYCAYTVADA 1372 (1391)
T ss_pred eeeeeeecCcHHHHHHHHHHHHhCCCceeeecCCccccCCCCCcCHHHHHHHHhccCcceeccCcceeEEEEeeeehHHH
Confidence 9999999999999999999999999987763322 356899999999999 999999998889999999999
Q ss_pred HHHHHHHHhccccCC
Q 045902 1458 FVFVYGIKFLNFQRR 1472 (1472)
Q Consensus 1458 ~~~~~~~~~~~~~~r 1472 (1472)
+++.+++|+.|||||
T Consensus 1373 ~l~~f~~~y~~~wrn 1387 (1391)
T KOG0065|consen 1373 FLAAFNIKYLNFWRN 1387 (1391)
T ss_pred HHHHHHHHHHHHHHh
Confidence 999999999999987
No 2
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=3.1e-239 Score=2381.50 Aligned_cols=1412 Identities=62% Similarity=1.072 Sum_probs=1261.6
Q ss_pred ccchhhhhHHHHhhCCChhhhhhhhhcccc-ccCCcc---ccccccCCCCchhhHHHHHHHHhhhhhcHHHHHHHHHHHH
Q 045902 53 EEDEEELKWAAIERLPTYDRVRKTMLKHVL-ENGRIG---YEEVDVSELGMQDKKNLLESILKVVEEDNEKFLLRLRERT 128 (1472)
Q Consensus 53 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 128 (1472)
|||||+|+|||+||||||+|+|++++.+.. ++|... .+++|+.+|+.++++.++++++++.++|++++++++++|.
T Consensus 41 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~ 120 (1470)
T PLN03140 41 DEDEEALKWAAIEKLPTYSRLRTSIMKSFVENDVYGNQLLHKEVDVTKLDGNDRQKFIDMVFKVAEEDNEKFLKKFRNRI 120 (1470)
T ss_pred cCChHhhhhHHhhhCCchhhhhhhhhhcccccccccccccccccccccCChHHHHHHHHhhhcccchhHHHHHHHHHhhh
Confidence 789999999999999999999999996421 111111 1359999999999999999999999999999999999999
Q ss_pred hhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHhHHHHHHhhhhhcccccCCcccceeeeceeeEEeCCeEEEEEcCC
Q 045902 129 DRVGIEIPKIEVRFENLSIEGDAYVGTRALPTLLNTSLNAIEGVLGFLRLFPSKKRKLEILHDVSGIVKPSRMTLLLGPP 208 (1472)
Q Consensus 129 ~~~~~~~p~~~v~f~~L~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~ilGp~ 208 (1472)
|++|+++|++||+|+||+|++++.++++.+||++|.+.+.++.+.+.++...+++.+++||+|+||.++|||+++|+|||
T Consensus 121 ~~~~~~~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpn 200 (1470)
T PLN03140 121 DRVGIKLPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPP 200 (1470)
T ss_pred ccccCCCCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCC
Confidence 99999999999999999999999999999999999999998887655444334556788999999999999999999999
Q ss_pred CCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHHHHHHHhhhccCCCchhHHHHHhh
Q 045902 209 GSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRFELLAELS 288 (1472)
Q Consensus 209 GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~ 288 (1472)
|||||||||+|+|+++++.+++|+|+|||+++++..+++.++||+|+|.|++++||+|||.|+++|++.+.++++..+.+
T Consensus 201 GSGKSTLLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~ 280 (1470)
T PLN03140 201 SSGKTTLLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELA 280 (1470)
T ss_pred CCCHHHHHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcC
Confidence 99999999999999988777899999999999887777889999999999999999999999999988776666656667
Q ss_pred HHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEE
Q 045902 289 RREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFM 368 (1472)
Q Consensus 289 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illL 368 (1472)
+++++.++.|+++++.++++...+|.+.+..++++++.+||++|+||.||+++.++|||||||||+||++|+++|+++||
T Consensus 281 ~~ek~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlll 360 (1470)
T PLN03140 281 RREKDAGIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFM 360 (1470)
T ss_pred HHHHhccCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEE
Confidence 77887788888889999999988888888888999999999999999999999999999999999999999999999999
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCC
Q 045902 369 DEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQGPREYVLDFFESVGFRCPERK 448 (1472)
Q Consensus 369 DEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~ 448 (1472)
||||+|||+.++.++++.|+++++..++|+|+++|||+++++++||+|++|++|+++|+||++++.+||+++||+||+++
T Consensus 361 DEPTsGLDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~G~ivy~G~~~~~~~yF~~lGf~cP~~~ 440 (1470)
T PLN03140 361 DEISTGLDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSEGQIVYQGPRDHILEFFESCGFKCPERK 440 (1470)
T ss_pred eCCCcCccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeCceEEEeCCHHHHHHHHHHcCCCCCCCC
Confidence 99999999999999999999998877899999999999999999999999999999999999999999999999999999
Q ss_pred ChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhcCCCCCCCCCCCCCCcCcccccHHHHHHH
Q 045902 449 GAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELRVPYDKSKTHPAGLVKKRYGISNWELFKT 528 (1472)
Q Consensus 449 ~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~ 528 (1472)
|+|||+++++++++++++|.....|++++++++|+++|++++.++++.++++.|.++++.++.....++|..++|+|++.
T Consensus 441 n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~~ 520 (1470)
T PLN03140 441 GTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLKA 520 (1470)
T ss_pred ChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHHH
Confidence 99999999999988888887777788888999999999999999888888877766665566666667899999999999
Q ss_pred HHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhhHHHHHHHHHHHHHHHHHHHHhhhhHHHH
Q 045902 529 CFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYGALFFSLVNVMFNGMAELALTIVRLPAFY 608 (1472)
Q Consensus 529 ~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~ 608 (1472)
|++|++++++||+..+++|+++.+++|+++|++||+++++..+..+++.+.|++||++++.+++++++++.++.+||||+
T Consensus 521 ~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~l~~~~~~r~vf~ 600 (1470)
T PLN03140 521 CWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAELALMIQRLPVFY 600 (1470)
T ss_pred HHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhH
Confidence 99999999999999999999999999999999999998766555567788999999999999999999999999999999
Q ss_pred HhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHH
Q 045902 609 KQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQLLAFFSVHQMGLSLFRFIAAVSRTQVVA 688 (1472)
Q Consensus 609 kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~~~~~~~~sl~r~iaa~~~~~~~a 688 (1472)
|||+.+||++|+|++|++++++|+.++++++|++|+|||+|+.+++++||.|+++++++++++.++|++++++++++.+|
T Consensus 601 ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~~A 680 (1470)
T PLN03140 601 KQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMIIA 680 (1470)
T ss_pred HhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCCCCCCCCCCCcccCCcchHHHHHhhcCCc
Q 045902 689 NTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDERWSAPNPARFLVDEPTVGKALLKARGMY 768 (1472)
Q Consensus 689 ~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~ 768 (1472)
+++++++++++++|+||++++++||+||+|++|+||++|+++|+++|||.+.+|.+..+.+ ...+.|..+|+.+|+.
T Consensus 681 ~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~---~~~~~G~~~L~~~g~~ 757 (1470)
T PLN03140 681 NTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASD---NSTRLGTAVLNIFDVF 757 (1470)
T ss_pred HHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCC---CCcccHHHHHHhcCcC
Confidence 9999999999999999999999999999999999999999999999999998886432211 2457899999999999
Q ss_pred ccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCcccccCh----hhhhhhc--ccCCCCCCCCC
Q 045902 769 TEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSKKQSNS----HAQQNMR--AADMSPPSTAP 842 (1472)
Q Consensus 769 ~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~--~~~~~~~~~~~ 842 (1472)
..+.|+|+++++|++|+++|+++++++|+|+++.........++..+......... ...+... ......+..
T Consensus 758 ~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 835 (1470)
T PLN03140 758 TDKNWYWIGVGALLGFTILFNVLFTLALTYLNPLGKKQAIISEETAEEMEGEEDSIPRSLSSADGNNTREVAIQRMSN-- 835 (1470)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHhcCccCCCCccccccchhhhhcccccccccccccccccccccccccccc--
Confidence 99999999999999999999999999999999766655443211111000000000 0000000 000000000
Q ss_pred cccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEE
Q 045902 843 LFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALV 922 (1472)
Q Consensus 843 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~ 922 (1472)
......... ..... ........++.+|+++.+++|+|++|.++++.+.++.+...+++++|+|||++++||+++|||
T Consensus 836 -~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~y~v~~~~~~~~~~~~~~~~~iL~~vs~~i~~Gel~aL~ 912 (1470)
T PLN03140 836 -PEGLSKNRD-SSLEA-ANGVAPKRGMVLPFTPLAMSFDDVNYFVDMPAEMKEQGVTEDRLQLLREVTGAFRPGVLTALM 912 (1470)
T ss_pred -ccccccccc-ccccc-ccccccccccccCCCcceEEEEEEEEEEccCccccccccCcCCceEeeCcEEEEECCeEEEEE
Confidence 000000000 00000 001122345677899999999999999998877666665566678999999999999999999
Q ss_pred cCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCc----h---
Q 045902 923 GVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPK----D--- 995 (1472)
Q Consensus 923 G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~----~--- 995 (1472)
||||||||||||+|+|+.+++..+|+|.+||++..+..+++.+|||+|+|.+++.+||+|+|.|++.++.+. +
T Consensus 913 G~sGaGKTTLL~~LaG~~~~g~~~G~I~inG~~~~~~~~~~~igyv~Q~d~~~~~lTV~E~L~~~a~lr~~~~~~~~~~~ 992 (1470)
T PLN03140 913 GVSGAGKTTLMDVLAGRKTGGYIEGDIRISGFPKKQETFARISGYCEQNDIHSPQVTVRESLIYSAFLRLPKEVSKEEKM 992 (1470)
T ss_pred CCCCCCHHHHHHHHcCCCCCCcccceEEECCccCChHHhhhheEEEccccccCCCCcHHHHHHHHHHhCCCCCCCHHHHH
Confidence 999999999999999998777789999999998765566778999999999999999999999998877542 1
Q ss_pred HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEE
Q 045902 996 MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTV 1075 (1472)
Q Consensus 996 ~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tv 1075 (1472)
+.++++++.++|.+++|+.+|.+++++|||||||||+||++|+++|+||||||||||||+.++..+++.|++++++|+||
T Consensus 993 ~~v~~vl~~lgL~~~~~~~vg~~~~~~LSgGerkRvsIa~aL~~~P~lL~LDEPTsgLD~~~a~~v~~~L~~l~~~g~tV 1072 (1470)
T PLN03140 993 MFVDEVMELVELDNLKDAIVGLPGVTGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTV 1072 (1470)
T ss_pred HHHHHHHHHCCChhHhCCccCCCCCCCcCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEE
Confidence 35789999999999999999988888999999999999999999999999999999999999999999999999889999
Q ss_pred EEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCCCCCCCCCCCcceEEEecchhhhhhhchhHH
Q 045902 1076 VCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGRQSHKLVEYFEAVPGVPKIRDGYNPATWVLEVSSNAVETQLNVDFA 1155 (1472)
Q Consensus 1076 i~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~ 1155 (1472)
|||+|||+.++++.||++++|++||+++|+||.+++++++.+||++++|.++||+++|||||++|+++.+.+.+...||+
T Consensus 1073 I~t~Hq~~~~i~~~~D~vllL~~gG~~v~~G~~~~~~~~~~~yF~~~~g~~~~p~~~NPAd~~l~v~~~~~~~~~~~d~~ 1152 (1470)
T PLN03140 1073 VCTIHQPSIDIFEAFDELLLMKRGGQVIYSGPLGRNSHKIIEYFEAIPGVPKIKEKYNPATWMLEVSSLAAEVKLGIDFA 1152 (1470)
T ss_pred EEEeCCCCHHHHHhCCEEEEEcCCCEEEEECCcccccccHHHHHHhcCCCCCCCCCCCchhhhhhhhcccccccccchHH
Confidence 99999999888999999999998899999999998888999999999888889999999999999988765555667999
Q ss_pred HHHhhcHHHHHHHHHHHhhcCCCCCCCCCcccccccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhc
Q 045902 1156 AIYADSDLYRRNQQLIKELSSPAPGSKDLYFTTKYSQDFITQCKTCFWKQHWSYWRNPKYNAIRFFLTTVIGALFGMIFW 1235 (1472)
Q Consensus 1156 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~ 1235 (1472)
+.|++|++++++++.+++++.+.++.++..++++|++++|+|+++|+||+++++||||.|+.+|+++++++|+++|++||
T Consensus 1153 ~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~R~p~~~~~r~~~~i~~al~~G~~f~ 1232 (1470)
T PLN03140 1153 EHYKSSSLYQRNKALVKELSTPPPGASDLYFATQYSQSTWGQFKSCLWKQWWTYWRSPDYNLVRFFFTLAAALMVGTIFW 1232 (1470)
T ss_pred HHHhccHHHHHHHHHHHHhccCCCCccccccCccccCCHHHHHHHHHHHHHHHHHCCHhHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999988888887776666666667889999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhHhHhHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHh
Q 045902 1236 DKGEKTSKEQDLINLLGAMYSAVLFLGASNASSVTSVVAIERTVFYRERAAGMYSSLTYAFAQVSIEAIYVSIQTIVYSL 1315 (1472)
Q Consensus 1236 ~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~ 1315 (1472)
+++++..+++|+++++|++|++++|+++.++++++|.+..||+||+|||++|+|++.+|++|++++|+||.++++++|++
T Consensus 1233 ~~~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~~p~~~~eR~vf~REr~~~~Y~~~~y~la~~l~eiP~~~~~~~if~~ 1312 (1470)
T PLN03140 1233 KVGTKRSNANDLTMVIGAMYAAVLFVGINNCSTVQPMVAVERTVFYRERAAGMYSALPYAIAQVVCEIPYVLIQTTYYTL 1312 (1470)
T ss_pred CCCCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99988778899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hhhhccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhh
Q 045902 1316 LLYSMIGFHWEVTKFLWFYFFMLMCFMYFTLYGMMLVALTPNQQIATILMSFFLSFWNLFSGFMVPRTQIPIWWRWYYWA 1395 (1472)
Q Consensus 1316 i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~ 1395 (1472)
|+|||+||++++.+||||+++++++.++++++|+++++++||.++|+++++++++++++||||++|+++||+||+|+||+
T Consensus 1313 i~Y~m~Gl~~~~~~f~~~~~~~~l~~~~~~~~g~~~~a~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~iP~~~~W~~~i 1392 (1470)
T PLN03140 1313 IVYAMVAFEWTAAKFFWFYFISFFSFLYFTYYGMMTVSLTPNQQVAAIFAAAFYGLFNLFSGFFIPRPKIPKWWVWYYWI 1392 (1470)
T ss_pred HHHhhcCCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHHeeeccChHHCchHHHHHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHhhCCccceeeccCC-CcccHHHHHHhhcCCccCchhHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 045902 1396 SPVAWTIYGLVTSQIGDKVSEVEVAGE-SGITVKEYLYKHYGYDYDFLGAVAAAHIGFVVLFFFVFVYGIKFLNFQRR 1472 (1472)
Q Consensus 1396 sp~~y~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~~~r 1472 (1472)
||++|+++|+++|||+|.+.++.+|+. +..+|++|++++|||+++++|++++++++|+++|++++++++|++|||||
T Consensus 1393 sp~~y~~~~l~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~q~r 1470 (1470)
T PLN03140 1393 CPVAWTVYGLIVSQYGDVEDTIKVPGGAPDPTIKWYIQDHYGYDPDFMGPVAAVLVGFTVFFAFIFAFCIRTLNFQTR 1470 (1470)
T ss_pred CHHHHHHhhhHHHHhCCCCCcccCCCCCCCCcHHHHHHHhcCcCcccccchhhhHHHHHHHHHHHHHHHHHHhhcccC
Confidence 999999999999999999877777652 24689999999999999999999999999999999999999999999998
No 3
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=1.6e-187 Score=1890.31 Aligned_cols=1289 Identities=30% Similarity=0.518 Sum_probs=1057.0
Q ss_pred hcHHHHHHHHHHHHhhcCCCCC--cceEEEeeeEEEEEEecCCCcCCChhHhHHHHHHhhhhhcccccCCcccceeeece
Q 045902 115 EDNEKFLLRLRERTDRVGIEIP--KIEVRFENLSIEGDAYVGTRALPTLLNTSLNAIEGVLGFLRLFPSKKRKLEILHDV 192 (1472)
Q Consensus 115 ~~~~~~~~~~~~~~~~~~~~~p--~~~v~f~~L~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~v 192 (1472)
.|.+++++.++++.++.+...| +++|+|+||+|++. ..+...+||++|.+.+.+..+...+. .++++++++||+|+
T Consensus 3 f~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~l~v~~~-~~~~~~~~t~~~~~~~~~~~~~~~~~-~~~~~~~~~iL~~v 80 (1394)
T TIGR00956 3 FNAKAWVKNFRKLIDSDPIYYKPYKLGVAYKNLSAYGV-AADSDYQPTFPNALLKILTRGFRKLK-KFRDTKTFDILKPM 80 (1394)
T ss_pred CCHHHHHHHHHHHHhccccCCCCCeeeEEEECCEEEEE-eccccccCchHHHHHHHHHHHHHHhc-ccCCCCcceeeeCC
Confidence 4566676665555556555555 99999999999993 44667799999998887664433221 12344567899999
Q ss_pred eeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCCCHHHHHH
Q 045902 193 SGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSL-RVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEMTVRETLD 269 (1472)
Q Consensus 193 s~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV~E~l~ 269 (1472)
|+.++|||+++|+||||||||||||+|+|+.++.. ..+|+|.+||+++++.. .++.++||+|+|.|++++||+|||.
T Consensus 81 s~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~~lTV~E~l~ 160 (1394)
T TIGR00956 81 DGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFPHLTVGETLD 160 (1394)
T ss_pred EEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCCCCCHHHHHH
Confidence 99999999999999999999999999999974321 25899999999876432 2456999999999999999999999
Q ss_pred HhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHH
Q 045902 270 FSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQ 349 (1472)
Q Consensus 270 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGq 349 (1472)
|+++++.+..+.. ...+.++. +...+.+++.+||++|+||.||++++++|||||
T Consensus 161 f~~~~~~~~~~~~---~~~~~~~~-----------------------~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGe 214 (1394)
T TIGR00956 161 FAARCKTPQNRPD---GVSREEYA-----------------------KHIADVYMATYGLSHTRNTKVGNDFVRGVSGGE 214 (1394)
T ss_pred HHHHhCCCCCCCC---CCCHHHHH-----------------------HHHHHHHHHHcCcccccCceeCCCcCCCCCccc
Confidence 9987764321100 00111100 012356899999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEecC
Q 045902 350 KKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQGP 429 (1472)
Q Consensus 350 rkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G~ 429 (1472)
||||+||++|+.+|+++||||||+|||+.++.++++.|+++++..|+|+|+++|||+++++++||+|++|++|+++|+|+
T Consensus 215 rkRvsIA~aL~~~p~vlllDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~G~iv~~G~ 294 (1394)
T TIGR00956 215 RKRVSIAEASLGGAKIQCWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYEGYQIYFGP 294 (1394)
T ss_pred chHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeCCeEEEECC
Confidence 99999999999999999999999999999999999999999986789999999999999999999999999999999999
Q ss_pred hhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhcCCCCCC---
Q 045902 430 REYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELRVPYDKS--- 506 (1472)
Q Consensus 430 ~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~~~~~~~--- 506 (1472)
++++.+||+++||.||+++|+|||++++++++++ +++.. .+...+.++++++++|++++.++++.++++.+.++.
T Consensus 295 ~~~~~~yF~~lG~~~p~~~n~aDfl~~~~~~~~~-~~~~~-~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~ 372 (1394)
T TIGR00956 295 ADKAKQYFEKMGFKCPDRQTTADFLTSLTSPAER-QIKPG-YEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSES 372 (1394)
T ss_pred HHHHHHHHHHcCCCCCCCCChHHHHHhccChhhh-hcccc-ccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccch
Confidence 9999999999999999999999999999987643 22211 111124678999999999988777666554321110
Q ss_pred ------------CCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCcccccc
Q 045902 507 ------------KTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLID 574 (1472)
Q Consensus 507 ------------~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~ 574 (1472)
+..+.....++|..++|+|++.|++|+++.++||+..++.++++.+++|+++|++|++++.+.. +
T Consensus 373 ~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~~~~---~ 449 (1394)
T TIGR00956 373 DTKEAYRESHVAKQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPKNTS---D 449 (1394)
T ss_pred hhHHHHHHHHHhhhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCch---h
Confidence 0011122345688999999999999999999999999999999999999999999999886543 3
Q ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCH
Q 045902 575 GGKFYGALFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSA 654 (1472)
Q Consensus 575 ~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~ 654 (1472)
.+.+.|++||++++.++.++.++..++.+|++|+|||.+++|++++|++|++++++|+.++.+++|++|+|||+|+.+++
T Consensus 450 ~~~r~g~lf~~~~~~~~~~~~~i~~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~ 529 (1394)
T TIGR00956 450 FYSRGGALFFAILFNAFSSLLEIASMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTA 529 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccH
Confidence 45678999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHH
Q 045902 655 TRFFRQLLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVL 734 (1472)
Q Consensus 655 ~~ff~~~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~ 734 (1472)
++||.+++++++++.++.++++++++++++..+|+.+++++++++++++||+++.++||+||+|++|+||+.|+++++++
T Consensus 530 ~~Ff~f~l~~~l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~ 609 (1394)
T TIGR00956 530 GRFFFYLLILFICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMV 609 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HhhcCCCCCCCC--C-CC--------cccC---------CcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHH
Q 045902 735 NEFLDERWSAPN--P-AR--------FLVD---------EPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIA 794 (1472)
Q Consensus 735 nef~~~~~~~~~--~-~~--------~~~~---------~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~ 794 (1472)
|||.+..+.|.. | ++ ...| +.+.|.++|+. ++.....|+|++++++++|+++|.+++++
T Consensus 610 nef~~~~~~C~~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~-~~~~~~~~~w~n~gil~~~~v~f~~~~~l 688 (1394)
T TIGR00956 610 NEFHGRRFECSQYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKL-SFQYYNSHKWRNFGIIIGFTVFFFFVYIL 688 (1394)
T ss_pred hhhcCCcccccccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHh-cCCcccchhhHHHHHHHHHHHHHHHHHHH
Confidence 999999998841 1 00 0011 24578899985 33334567999999999999999999999
Q ss_pred HHHhcCCCcCcccccccccCCCCcccccChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCcccccc
Q 045902 795 ALTYLDPFKETKSVMMEHNDGGKSKKQSNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQ 874 (1472)
Q Consensus 795 aL~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 874 (1472)
+++|.++.......+..+................++...+..... +. .+.... ......... . ..+..
T Consensus 689 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~--~~---~~~~~~---~~~~~~~~~--~--~~~~~ 756 (1394)
T TIGR00956 689 LTEFNKGAKQKGEILVFRRGSLKRAKKAGETSASNKNDIEAGEVL--GS---TDLTDE---SDDVNDEKD--M--EKESG 756 (1394)
T ss_pred HHHhccccCCCCceEeeccccccchhhcccccccccccccccccC--CC---Cccccc---ccccccccc--c--cccCC
Confidence 999998665544333222211100000000000000000000000 00 000000 000000000 0 00011
Q ss_pred ceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC-eeEEEEEEcC
Q 045902 875 PLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-YIEGSISISG 953 (1472)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~G 953 (1472)
...+.|+|++|.++.. .+++.+|+|||++++|||++||||||||||||||++|+|+.+++ +.+|+|.+||
T Consensus 757 ~~~l~~~nl~~~~~~~---------~~~~~iL~~vs~~i~~Ge~~aI~G~sGaGKSTLL~~Lag~~~~g~~~~G~I~i~G 827 (1394)
T TIGR00956 757 EDIFHWRNLTYEVKIK---------KEKRVILNNVDGWVKPGTLTALMGASGAGKTTLLNVLAERVTTGVITGGDRLVNG 827 (1394)
T ss_pred CceEEEEeeEEEecCC---------CCCcEeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECC
Confidence 2357899999887421 13467999999999999999999999999999999999997644 4579999999
Q ss_pred ccCChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCc-------hHHHHHHHHHcccccccccccCCCCCCCCCHH
Q 045902 954 YPKKQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPK-------DMFVEEVMELVEMKALRNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 954 ~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~-------~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgG 1026 (1472)
++... .+++.+|||+|+|.+++.+||+|+|.|++.++.+. .+.++++++.+++.+++|+.+|.++. +||||
T Consensus 828 ~~~~~-~~~~~i~yv~Q~~~~~~~~Tv~E~L~~~a~l~~~~~~~~~~~~~~v~~~l~~l~L~~~~d~~v~~~~~-~LSgG 905 (1394)
T TIGR00956 828 RPLDS-SFQRSIGYVQQQDLHLPTSTVRESLRFSAYLRQPKSVSKSEKMEYVEEVIKLLEMESYADAVVGVPGE-GLNVE 905 (1394)
T ss_pred EECCh-hhhcceeeecccccCCCCCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhhCCCeeCCCCC-CCCHH
Confidence 98753 46778999999999999999999999998887532 13578999999999999999987653 89999
Q ss_pred HHHHHHHHHHHhhCCC-CccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1027 QRKRLTIAVELVANPS-IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~-il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
|||||+||+||+.+|+ ||||||||||||+.++..+++.|++++++|+|||+|+|||+..+++.||++++|++||+++|.
T Consensus 906 qrqRl~Ia~aL~~~P~~iLlLDEPTsgLD~~~~~~i~~~L~~la~~g~tvI~t~H~~~~~~~~~~D~vl~L~~GG~iv~~ 985 (1394)
T TIGR00956 906 QRKRLTIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKLMRKLADHGQAILCTIHQPSAILFEEFDRLLLLQKGGQTVYF 985 (1394)
T ss_pred HhhHHHHHHHHHcCCCeEEEEcCCCCCCCHHHHHHHHHHHHHHHHcCCEEEEEecCCCHHHHHhcCEEEEEcCCCEEEEE
Confidence 9999999999999997 999999999999999999999999998889999999999997778899999999988899999
Q ss_pred cCCCcchhHHHHHHHhCCCCCCCCCCCCCcceEEEecchhhhhhhchhHHHHHhhcHHHHHHHHHHHhhcCCCCCC---C
Q 045902 1106 GPLGRQSHKLVEYFEAVPGVPKIRDGYNPATWVLEVSSNAVETQLNVDFAAIYADSDLYRRNQQLIKELSSPAPGS---K 1182 (1472)
Q Consensus 1106 g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~---~ 1182 (1472)
|+.+++++++.+||++. |.++||+++|||||++|+++...+.....+|++.|++|+++++..+.++++..+.... .
T Consensus 986 G~~~~~~~~~~~yf~~~-G~~~~p~~~NpAd~~ldvi~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 1064 (1394)
T TIGR00956 986 GDLGENSHTIINYFEKH-GAPKCPEDANPAEWMLEVIGAAPGAHANQDYHEVWRNSSEYQAVKNELDRLEAELSKAEDDN 1064 (1394)
T ss_pred CCcccccchHHHHHHhc-CCCCCCCCCCHHHHHHHHhhcccccchhccHHHHHhcCHHHHHHHHHHHHhhcccccCcccc
Confidence 99988888999999986 6667999999999999998765444444689999999998887766665554332111 1
Q ss_pred CCcccccccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHH
Q 045902 1183 DLYFTTKYSQDFITQCKTCFWKQHWSYWRNPKYNAIRFFLTTVIGALFGMIFWDKGEKTSKEQDLINLLGAMYSAVLFLG 1262 (1472)
Q Consensus 1183 ~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~ 1262 (1472)
+.....+|++|+|+|+++|++|+++++||||.|+.+|+++++++|+++|++||++++ ++++++|++|++|+++++.+
T Consensus 1065 ~~~~~~~~~~s~~~q~~~l~~R~~~~~~R~~~~~~~r~~~~i~~~l~~G~~f~~~~~---~~~~i~~~~g~~f~~~~~~~ 1141 (1394)
T TIGR00956 1065 DPDALSKYAASLWYQFKLVLWRTFQQYWRTPDYLYSKFFLTIFAALFIGFTFFKVGT---SLQGLQNQMFAVFMATVLFN 1141 (1394)
T ss_pred ccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHHHhCCCC---CHHHHHHHHHHHHHHHHHHH
Confidence 111224789999999999999999999999999999999999999999999999986 57899999999999988887
Q ss_pred HHhhhhHhHhHHHhhhHH-HHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccHHH-------HHHHH
Q 045902 1263 ASNASSVTSVVAIERTVF-YRERAAGMYSSLTYAFAQVSIEAIYVSIQTIVYSLLLYSMIGFHWEVTK-------FLWFY 1334 (1472)
Q Consensus 1263 ~~~~~~v~~~~~~er~v~-~RE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~-------f~~~~ 1334 (1472)
+. +.+++|.+..||.+| +|||++|+|++.+|++|++++|+|+.++.+++|++|+|||+||++++.+ |++|+
T Consensus 1142 ~~-~~~~~~~f~~~r~~~~~RE~~s~~Y~~~~y~~a~~l~elP~~~~~~~if~~i~Y~~~Gl~~~~~~~~~~~~~f~~~~ 1220 (1394)
T TIGR00956 1142 PL-IQQYLPPFVAQRDLYEVRERPSRTFSWLAFIAAQITVEIPYNLVAGTIFFFIWYYPVGFYWNASKTGQVHERGVLFW 1220 (1394)
T ss_pred HH-HHHhhhhHHHHHHHHHHHHhhcCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeecccccCcccccccccchHHHHH
Confidence 76 456677788888886 8999999999999999999999999999999999999999999988866 99999
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCcc
Q 045902 1335 FFMLMCFMYFTLYGMMLVALTPNQQIATILMSFFLSFWNLFSGFMVPRTQIPIWWRWYYWASPVAWTIYGLVTSQIGDKV 1414 (1472)
Q Consensus 1335 ~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~ 1414 (1472)
++++++.++++++|+++++++|+.++|+.+++++++++++||||++|+++||+||+|+||+||++|+++|++.|||+|.+
T Consensus 1221 ~~~~~~~~~~~s~g~~~~~~~~~~~~a~~~~~~~~~~~~lf~G~~~~~~~ip~~~~w~~~~sp~~y~~~~l~~~~~~~~~ 1300 (1394)
T TIGR00956 1221 LLSTMFFLYFSTLGQMVISFNPNADNAAVLASLLFTMCLSFCGVLAPPSRMPGFWIFMYRCSPFTYLVQALLSTGLADVP 1300 (1394)
T ss_pred HHHHHHHHHHHHHHHHHHHHCCcHHHHHHHHHHHHHHHHHhccccCChhHCcHHHhHHHhcCHHHHHHHHHHHHHcCCCe
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999987
Q ss_pred ceeec------cCCCcccH--------------------------------HHHHHhhcCCccCchhHHHHHHHHHHHHH
Q 045902 1415 SEVEV------AGESGITV--------------------------------KEYLYKHYGYDYDFLGAVAAAHIGFVVLF 1456 (1472)
Q Consensus 1415 ~~~~~------~~~~~~~~--------------------------------~~~l~~~~g~~~~~~~~~~~il~~~~~~f 1456 (1472)
..|.. ..+.++|| .+|++ .+|+++++.|+|++++++|++++
T Consensus 1301 ~~C~~~e~~~f~pp~~~tC~~y~~~~~~~~~G~l~~~~a~~~C~yC~~~~~~~~l~-~~~~~~~~~w~~~~i~~~~~~~~ 1379 (1394)
T TIGR00956 1301 VTCKVKELLTFNPPSGQTCGEYMKPYLENAGGYLLNPNATDSCSFCQYSYTNDFLE-PISSKYSGRWRNFGIFIAFIFFN 1379 (1394)
T ss_pred eecCccccceecCCCCCCHHHHHHHHHhhCCcEeeCCCCCCCCCcCCCCCHHHHHH-HcCCcccccccchhhhhHHHHHH
Confidence 54311 01122334 44544 56899999999999999999988
Q ss_pred HHHHHHHHHhc
Q 045902 1457 FFVFVYGIKFL 1467 (1472)
Q Consensus 1457 ~~~~~~~~~~~ 1467 (1472)
+++++++.+.
T Consensus 1380 -~~~~~~l~~~ 1389 (1394)
T TIGR00956 1380 -IIATVFFYWL 1389 (1394)
T ss_pred -HHHHHhhheE
Confidence 7777777765
No 4
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=5.7e-91 Score=884.74 Aligned_cols=577 Identities=24% Similarity=0.412 Sum_probs=478.2
Q ss_pred cceEEEEeceeeEEeccc----------------hhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhc
Q 045902 874 QPLSLAFDHVNYFVDMPA----------------EMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLA 937 (1472)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~----------------~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~ 937 (1472)
.++.+.|.++.|+++... ..++....++++.+|+|||++++|||++||+|||||||||||++|+
T Consensus 36 ~~~~~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKSTLL~iLa 115 (659)
T PLN03211 36 YPITLKFMDVCYRVKFENMKNKGSNIKRILGHKPKISDETRQIQERTILNGVTGMASPGEILAVLGPSGSGKSTLLNALA 115 (659)
T ss_pred CceEEEEEeEEEEEccCCCcccccccccccccccccccccccCCCCeeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHh
Confidence 367899999999986442 0111122344678999999999999999999999999999999999
Q ss_pred CCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCc----h---HHHHHHHHHcccccc
Q 045902 938 GRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPK----D---MFVEEVMELVEMKAL 1010 (1472)
Q Consensus 938 g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~----~---~~~~~v~~~l~l~~~ 1010 (1472)
|+.+++..+|+|.+||++.... .++.+|||+|++.+++.+||+|++.|.+.++.+. + +.++++++.+||.++
T Consensus 116 G~~~~~~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~~~~~~~~~~v~~~l~~lgL~~~ 194 (659)
T PLN03211 116 GRIQGNNFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKSLTKQEKILVAESVISELGLTKC 194 (659)
T ss_pred CCCCCCceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHcCChhh
Confidence 9876544689999999986533 3456899999999999999999999988776432 1 346789999999999
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhh
Q 045902 1011 RNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1090 (1472)
Q Consensus 1011 ~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~ 1090 (1472)
+|+.+|+...++||||||||++||++|+++|+||+|||||+|||+.++..+++.|++++++|+|||+++|||+.++++.|
T Consensus 195 ~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPtsgLD~~~~~~l~~~L~~l~~~g~TvI~~sH~~~~~i~~~~ 274 (659)
T PLN03211 195 ENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTSGLDATAAYRLVLTLGSLAQKGKTIVTSMHQPSSRVYQMF 274 (659)
T ss_pred cCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCCCcCHHHHHHHHHHHHHHHhCCCEEEEEecCCCHHHHHhh
Confidence 99999887778999999999999999999999999999999999999999999999998889999999999997789999
Q ss_pred CeEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCCCCCCCCCCCcceEEEecchhhhh------h---hchhHHHHHhhc
Q 045902 1091 DELFLMKRGGHVIYAGPLGRQSHKLVEYFEAVPGVPKIRDGYNPATWVLEVSSNAVET------Q---LNVDFAAIYADS 1161 (1472)
Q Consensus 1091 D~v~~l~~gg~v~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~~~~------~---~~~~~~~~~~~s 1161 (1472)
|++++|++ |+++|.|+. +++.+||+++ |. +||+++|||||++|+++...+. . ......+.|++.
T Consensus 275 D~iilL~~-G~iv~~G~~----~~~~~~f~~~-G~-~~P~~~NpADf~ldv~~~~~~~~~~~~~~~~~~~~~l~~~~~~~ 347 (659)
T PLN03211 275 DSVLVLSE-GRCLFFGKG----SDAMAYFESV-GF-SPSFPMNPADFLLDLANGVCQTDGVSEREKPNVKQSLVASYNTL 347 (659)
T ss_pred ceEEEecC-CcEEEECCH----HHHHHHHHHC-CC-CCCCCCCHHHHHHHHcCccccCCCccccccchHHHHHHHHHHhh
Confidence 99999985 799999986 5789999998 54 5899999999999998643110 0 011223344321
Q ss_pred HHHHHHHHHHHhh--cC-CCC-----CCCCCc-ccccccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHH
Q 045902 1162 DLYRRNQQLIKEL--SS-PAP-----GSKDLY-FTTKYSQDFITQCKTCFWKQHWSYWRNPKYNAIRFFLTTVIGALFGM 1232 (1472)
Q Consensus 1162 ~~~~~~~~~~~~~--~~-~~~-----~~~~~~-~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~ 1232 (1472)
. .+......+.. .. ..+ ..+... ....+..+||+|+.+|++|++++ |||+.+..+|+++++++|+++|+
T Consensus 348 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~ 425 (659)
T PLN03211 348 L-APKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFNQFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGL 425 (659)
T ss_pred c-cHHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHHHHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHH
Confidence 1 11111111110 00 000 001000 11235678999999999999998 99999999999999999999999
Q ss_pred HhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhHhHhHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHH
Q 045902 1233 IFWDKGEKTSKEQDLINLLGAMYSAVLFLGASNASSVTSVVAIERTVFYRERAAGMYSSLTYAFAQVSIEAIYVSIQTIV 1312 (1472)
Q Consensus 1233 ~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~ 1312 (1472)
+||+++ ..+++++.|++|++++++++.+++.+++.|+.||+||+|||++|+|++++|++|++++|+|+.++.+++
T Consensus 426 lf~~~~-----~~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~i 500 (659)
T PLN03211 426 MWWHSD-----FRDVQDRLGLLFFISIFWGVFPSFNSVFVFPQERAIFVKERASGMYTLSSYFMARIVGDLPMELILPTI 500 (659)
T ss_pred HHhcCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 999875 467899999999999999988888889999999999999999999999999999999999999999999
Q ss_pred HHhhhhhccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhh
Q 045902 1313 YSLLLYSMIGFHWEVTKFLWFYFFMLMCFMYFTLYGMMLVALTPNQQIATILMSFFLSFWNLFSGFMVPRTQIPIWWRWY 1392 (1472)
Q Consensus 1313 ~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~ 1392 (1472)
|.+|+|||+|+++++.+||+|+++++++.++++++|+++++++|+.++|+.+++++++++++||||+++ +||+||+|+
T Consensus 501 f~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~ 578 (659)
T PLN03211 501 FLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIMDAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWI 578 (659)
T ss_pred HHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999999999999999997 799999999
Q ss_pred hhhCHHHHHHHHHHHHhhCCccce---eeccCC---CcccHHHHHHhhcCCccCchhHHHHHHHHHHHHHHHHHHHHHHh
Q 045902 1393 YWASPVAWTIYGLVTSQIGDKVSE---VEVAGE---SGITVKEYLYKHYGYDYDFLGAVAAAHIGFVVLFFFVFVYGIKF 1466 (1472)
Q Consensus 1393 ~~~sp~~y~~~~l~~~~~~~~~~~---~~~~~~---~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~ 1466 (1472)
+|+||++|+++|++.|||++.+.. ..|++. ....|. ++. ..+++....|.++++|++|+++|++++++++++
T Consensus 579 ~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~-~~~-~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~L~~ 656 (659)
T PLN03211 579 KYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCK-FVE-EDVAGQISPATSVSVLIFMFVGYRLLAYLALRR 656 (659)
T ss_pred HHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCc-cch-hhhhcccchHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999999999999876431 223321 111121 222 233445568999999999999999999999999
Q ss_pred ccc
Q 045902 1467 LNF 1469 (1472)
Q Consensus 1467 ~~~ 1469 (1472)
+||
T Consensus 657 ~~~ 659 (659)
T PLN03211 657 IKH 659 (659)
T ss_pred ccC
Confidence 886
No 5
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=9.3e-91 Score=884.75 Aligned_cols=560 Identities=29% Similarity=0.484 Sum_probs=489.6
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCH
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-YIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
++.+|+|||++++|||++||+|||||||||||++|+|+.+++ ..+|+|.+||.+.....+++.+|||+|+|.+++.+||
T Consensus 37 ~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~lTV 116 (617)
T TIGR00955 37 RKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPTLTV 116 (617)
T ss_pred ccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCccCcH
Confidence 467999999999999999999999999999999999987643 3589999999987766677889999999999999999
Q ss_pred HHHHHHHHHcCCCch-------HHHHHHHHHcccccccccccCCCC-CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 981 YESLLYSAWLRLPKD-------MFVEEVMELVEMKALRNSLVGLPG-VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 981 ~e~l~~~~~l~~~~~-------~~~~~v~~~l~l~~~~~~~~~~~~-~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
+|||.|++.++.+.+ ..++++++.+++.+++|+.+|.++ .++|||||||||+||+||+++|++|+|||||+|
T Consensus 117 ~e~l~f~~~~~~~~~~~~~~~~~~v~~~l~~lgL~~~~~t~vg~~~~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsg 196 (617)
T TIGR00955 117 REHLMFQAHLRMPRRVTKKEKRERVDEVLQALGLRKCANTRIGVPGRVKGLSGGERKRLAFASELLTDPPLLFCDEPTSG 196 (617)
T ss_pred HHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHcCchhcCcCccCCCCCCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcc
Confidence 999999998876531 357899999999999999999753 568999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCCCCCCCCC
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGRQSHKLVEYFEAVPGVPKIRDGY 1132 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~~~~~~~~~f~~~~~~~~~~~~~ 1132 (1472)
||+.++..+++.|++++++|+|||+++|||+.++++.||++++|+ +|+++|.||. +++.+||+++ |. +||++.
T Consensus 197 LD~~~~~~l~~~L~~l~~~g~tvi~~~hq~~~~i~~~~D~i~ll~-~G~~v~~G~~----~~~~~~f~~~-g~-~~p~~~ 269 (617)
T TIGR00955 197 LDSFMAYSVVQVLKGLAQKGKTIICTIHQPSSELFELFDKIILMA-EGRVAYLGSP----DQAVPFFSDL-GH-PCPENY 269 (617)
T ss_pred hhHHHHHHHHHHHHHHHhCCCEEEEEeCCCCHHHHHHhceEEEee-CCeEEEECCH----HHHHHHHHHc-CC-CCCCCC
Confidence 999999999999999998899999999999888999999999998 5799999997 5789999998 44 689999
Q ss_pred CCcceEEEecchhhhhh-----hchhHHHHHhhcHHHHHHHHHHHhhcCCCCC---CCCCcccccccchhHHHHHHHHHH
Q 045902 1133 NPATWVLEVSSNAVETQ-----LNVDFAAIYADSDLYRRNQQLIKELSSPAPG---SKDLYFTTKYSQDFITQCKTCFWK 1204 (1472)
Q Consensus 1133 npa~~~l~~~~~~~~~~-----~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~Q~~~l~~R 1204 (1472)
|||||++++++...+.+ ...++.+.|++|+.+++..+.......+.++ ..+....++|..+++.|+..|++|
T Consensus 270 n~ad~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R 349 (617)
T TIGR00955 270 NPADFYVQVLAVIPGSENESRERIEKICDSFAVSDIGRDMLVNTNLWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKR 349 (617)
T ss_pred ChHHHHHHHhhcCcccccchHHHHHHHHHHHhcchhhHHHHHHhhhhhccccccccccccccccccCCCHHHHHHHHHHH
Confidence 99999999876432211 1134566777777665544433322111111 111112346789999999999999
Q ss_pred HHHHHhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhHhHhHHHhhhHHHHHh
Q 045902 1205 QHWSYWRNPKYNAIRFFLTTVIGALFGMIFWDKGEKTSKEQDLINLLGAMYSAVLFLGASNASSVTSVVAIERTVFYRER 1284 (1472)
Q Consensus 1205 ~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v~~RE~ 1284 (1472)
+++++||||.+..+|+++++++|+++|++||++++ ++++++++.|++|++++++++.++..+.+.++.||.+|+||+
T Consensus 350 ~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~---~~~~~~~~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~ 426 (617)
T TIGR00955 350 SWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGL---TQKGVQNINGALFLFLTNMTFQNVFPVINVFTAELPVFLRET 426 (617)
T ss_pred HHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 99999999999999999999999999999999986 567899999999999999999888888899999999999999
Q ss_pred cCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHHHHHHH
Q 045902 1285 AAGMYSSLTYAFAQVSIEAIYVSIQTIVYSLLLYSMIGFHWEVTKFLWFYFFMLMCFMYFTLYGMMLVALTPNQQIATIL 1364 (1472)
Q Consensus 1285 ~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~~A~~~ 1364 (1472)
.+|+|++.+|++|++++|+|+.++.+++|.+|+|||+|+++++.+||+|+++++++.++++++|+++++++|+..+|+.+
T Consensus 427 ~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~ 506 (617)
T TIGR00955 427 RSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATHFLTFLFLVTLVANVATSFGYLISCAFSSTSMALTV 506 (617)
T ss_pred cCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCccc-eeeccCC---CcccHHHHHHhhcCCccC
Q 045902 1365 MSFFLSFWNLFSGFMVPRTQIPIWWRWYYWASPVAWTIYGLVTSQIGDKVS-EVEVAGE---SGITVKEYLYKHYGYDYD 1440 (1472)
Q Consensus 1365 ~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~-~~~~~~~---~~~~~~~~l~~~~g~~~~ 1440 (1472)
+++++.++++|+||+++.++||+||+|++|+||++|+++|++.|||++... +|...+. +..++ +++.+.||++.+
T Consensus 507 ~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~nef~~~~~~~c~~~~~~~~c~~~g-~~~l~~~g~~~~ 585 (617)
T TIGR00955 507 GPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQWSDVDNIECTSANTTGPCPSSG-EVILETLSFRNA 585 (617)
T ss_pred HHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHHhCCCccccccCcCcCCCCCcCh-HHHHHhcCCCcc
Confidence 999999999999999999999999999999999999999999999988764 3311111 11334 666668999999
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHhccccCC
Q 045902 1441 FLGAVAAAHIGFVVLFFFVFVYGIKFLNFQRR 1472 (1472)
Q Consensus 1441 ~~~~~~~il~~~~~~f~~~~~~~~~~~~~~~r 1472 (1472)
++|.+++++++|.++|++++++++|+-...+|
T Consensus 586 ~~~~~~~il~~~~~~~~~l~~~~L~~~~~~~~ 617 (617)
T TIGR00955 586 DLYLDLIGLVILIFFFRLLAYFALRIRIRRKR 617 (617)
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999999999999999999999998766665
No 6
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=2.5e-90 Score=869.72 Aligned_cols=572 Identities=32% Similarity=0.566 Sum_probs=495.4
Q ss_pred cceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC-eeEEEEEEc
Q 045902 874 QPLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-YIEGSISIS 952 (1472)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~ 952 (1472)
.+..+.|+|+++..+.+.. ..+++|+|||++++|||++||||||||||||||++|+|+..++ ..+|+|.+|
T Consensus 22 ~~~~~~~~~~~~~~~~~~~--------~~k~iL~~vsg~~~~Gel~AimG~SGsGKtTLL~~Lagr~~~~~~~~G~ilvN 93 (613)
T KOG0061|consen 22 EPVKLSFRNLTLSSKEKSK--------KTKTILKGVSGTAKPGELLAIMGPSGSGKTTLLNALAGRLNGGLKLSGEILLN 93 (613)
T ss_pred ccceeEEEEEEEEecCCCC--------ccceeeeCcEEEEecCeEEEEECCCCCCHHHHHHHHhccccCCCcceEEEEEC
Confidence 4567899999988754321 3478999999999999999999999999999999999998764 689999999
Q ss_pred CccCChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCch-------HHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 953 GYPKKQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKD-------MFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 953 G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~-------~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
|++.+.+.+++.+|||+|+|.++|++||+|+|.|+|.+|+|.+ .+++++++.|+|.+++|+++|.++.+|+||
T Consensus 94 G~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~~~~~~k~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSG 173 (613)
T KOG0061|consen 94 GRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSSLSKEEKRERVEEVISELGLEKCADTLIGNPGIRGLSG 173 (613)
T ss_pred CccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCCCCHHHHHHHHHHHHHHcCChhhccceecCCCCCcccc
Confidence 9988888899999999999999999999999999999998862 578999999999999999999998899999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
||||||+||.+|++||+||||||||||||+.++..++++|+++|++|+|||||+|||+.++++.||++++|.+ |+++|.
T Consensus 174 GErkRvsia~Ell~~P~iLflDEPTSGLDS~sA~~vv~~Lk~lA~~grtVi~tIHQPss~lf~lFD~l~lLs~-G~~vy~ 252 (613)
T KOG0061|consen 174 GERKRVSIALELLTDPSILFLDEPTSGLDSFSALQVVQLLKRLARSGRTVICTIHQPSSELFELFDKLLLLSE-GEVVYS 252 (613)
T ss_pred chhhHHHHHHHHHcCCCEEEecCCCCCcchhhHHHHHHHHHHHHhCCCEEEEEEeCCcHHHHHHHhHhhhhcC-CcEEEe
Confidence 9999999999999999999999999999999999999999999999999999999999999999999999996 699999
Q ss_pred cCCCcchhHHHHHHHhCCCCCCCCCCCCCcceEEEecchh-hhhhhchhHHHH------HhhcHHHHHHHH-HHHhhcCC
Q 045902 1106 GPLGRQSHKLVEYFEAVPGVPKIRDGYNPATWVLEVSSNA-VETQLNVDFAAI------YADSDLYRRNQQ-LIKELSSP 1177 (1472)
Q Consensus 1106 g~~~~~~~~~~~~f~~~~~~~~~~~~~npa~~~l~~~~~~-~~~~~~~~~~~~------~~~s~~~~~~~~-~~~~~~~~ 1177 (1472)
|+. +++.+||++. |.| ||+.+|||||++|+.+.. ..... .+..+. ++..+...+... ..+.+..
T Consensus 253 G~~----~~~~~ff~~~-G~~-~P~~~Npadf~l~l~s~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 324 (613)
T KOG0061|consen 253 GSP----RELLEFFSSL-GFP-CPELENPADFLLDLLSVDSGTREL-EEAVRIAKLINKFSQTDNLKKTLEALEKSLST- 324 (613)
T ss_pred cCH----HHHHHHHHhC-CCC-CCCcCChHHHHHHHHccCCCchhH-HhHHHHHHHhhhccccchhhhhHHHHhhhccc-
Confidence 997 5789999998 554 999999999999987742 11000 011111 110111111100 0111111
Q ss_pred CCCCCCCcccccccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHH
Q 045902 1178 APGSKDLYFTTKYSQDFITQCKTCFWKQHWSYWRNPKYNAIRFFLTTVIGALFGMIFWDKGEKTSKEQDLINLLGAMYSA 1257 (1472)
Q Consensus 1178 ~~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~ 1257 (1472)
... .+.....+||.|+..+++|.+++.+|||.+...|+++.+++|+++|++||++++ +..+++++.|++|+.
T Consensus 325 ---~~~--~~~~~~~s~~~q~~~L~~R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~---~~~~~~~~~g~~~~~ 396 (613)
T KOG0061|consen 325 ---SKK--VEIGTSPSWWTQFKILLKRSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGN---DAKGIQNRLGLFFFI 396 (613)
T ss_pred ---ccc--cccccCCcHHHHHHHHHHHHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCC---chHHHHHHHHHHHHH
Confidence 111 111127899999999999999999999999999999999999999999999976 456677999999999
Q ss_pred HHHHHHHhhhhHhHhHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccHHHHHHHHHHH
Q 045902 1258 VLFLGASNASSVTSVVAIERTVFYRERAAGMYSSLTYAFAQVSIEAIYVSIQTIVYSLLLYSMIGFHWEVTKFLWFYFFM 1337 (1472)
Q Consensus 1258 ~~~~~~~~~~~v~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~ 1337 (1472)
+.++.+..+...++.|+.||++|.||+.+|+|+.++|++|++++++|+.++.+++|.+|+|||+|++++...|++|++++
T Consensus 397 ~~~~~f~~~~~~i~~f~~e~~~f~rE~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~ 476 (613)
T KOG0061|consen 397 LSFMTFLSMFGAVPVFPQERPIFLRETSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLII 476 (613)
T ss_pred HHHHHHHHHHhHHHHhHHHHHHHHHHHhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHH
Confidence 99998888888889999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCcccee
Q 045902 1338 LMCFMYFTLYGMMLVALTPNQQIATILMSFFLSFWNLFSGFMVPRTQIPIWWRWYYWASPVAWTIYGLVTSQIGDKVSEV 1417 (1472)
Q Consensus 1338 ~~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~ 1417 (1472)
++..+.++++|++++++.||...|..+++++...+++|+||+++.++||+||+|++|+|+++|+++|++.|||++....+
T Consensus 477 ~~~~~~a~s~~~~i~~~~~~~~~a~~~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~ 556 (613)
T KOG0061|consen 477 LLSSLVAESLGLFISAIVPNLSLATSLGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRC 556 (613)
T ss_pred HHHHHHHHHHHHHHHHhccchhheeehHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhcccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999722222
Q ss_pred e--ccCCCcccHHHHHHhhcCCccCchhHHHHHHHHHHHHHHHHHHHHHHhccccC
Q 045902 1418 E--VAGESGITVKEYLYKHYGYDYDFLGAVAAAHIGFVVLFFFVFVYGIKFLNFQR 1471 (1472)
Q Consensus 1418 ~--~~~~~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~~~ 1471 (1472)
. ++.....+..++++ +.+++.+..|.++.+++++.++|++++++++++--..+
T Consensus 557 ~~~~~~~~~~~~~~~l~-~~~~~~~~~~~~l~~l~~~~~~~~il~y~~L~~~~~~~ 611 (613)
T KOG0061|consen 557 FLSGNLCCESTGEDVLK-QLGFEDSSFWLDLLVLLAFIVFFRVLGYLALRFRVKRK 611 (613)
T ss_pred ccCcCCcccccHHHHHH-hcCCcccccchhHHHHHHHHHHHHHHHHHHHHhhcccc
Confidence 1 11122345666665 58999999999999999999999999999999755443
No 7
>TIGR00956 3a01205 Pleiotropic Drug Resistance (PDR) Family protein.
Probab=100.00 E-value=7.5e-89 Score=925.65 Aligned_cols=558 Identities=24% Similarity=0.435 Sum_probs=489.5
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--CeeEEEEEEcCccCCh--hcccceeEEeccCCCCCC
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSP 976 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~ 976 (1472)
+++++|+|||+.++|||+++|+||||||||||||+|+|+..+ .+.+|+|.+||.+..+ ..+++.++|++|+|.+++
T Consensus 72 ~~~~iL~~vs~~i~~Ge~~aIlG~nGsGKSTLLk~LaG~~~~~~~~~~G~I~~~G~~~~~~~~~~r~~i~yv~Q~d~~~~ 151 (1394)
T TIGR00956 72 KTFDILKPMDGLIKPGELTVVLGRPGSGCSTLLKTIASNTDGFHIGVEGVITYDGITPEEIKKHYRGDVVYNAETDVHFP 151 (1394)
T ss_pred CcceeeeCCEEEEECCEEEEEECCCCCCHHHHHHHHhCCCCCCCCCceeEEEECCEehHHHHhhcCceeEEeccccccCC
Confidence 456799999999999999999999999999999999998632 2468999999987643 234567999999999999
Q ss_pred CCCHHHHHHHHHHcCCCc--------hH---H-HHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 045902 977 NVTIYESLLYSAWLRLPK--------DM---F-VEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSII 1044 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~~~--------~~---~-~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il 1044 (1472)
.+||+|+|.|++.++.+. ++ . ++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|+|+
T Consensus 152 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~t~vg~~~~~~LSGGerkRvsIA~aL~~~p~vl 231 (1394)
T TIGR00956 152 HLTVGETLDFAARCKTPQNRPDGVSREEYAKHIADVYMATYGLSHTRNTKVGNDFVRGVSGGERKRVSIAEASLGGAKIQ 231 (1394)
T ss_pred CCCHHHHHHHHHHhCCCCCCCCCCCHHHHHHHHHHHHHHHcCcccccCceeCCCcCCCCCcccchHHHHHHHHHhCCCEE
Confidence 999999999998776421 11 2 35689999999999999998888999999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHHHhCC
Q 045902 1045 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGRQSHKLVEYFEAVP 1123 (1472)
Q Consensus 1045 ~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~~~~~~~~~f~~~~ 1123 (1472)
+|||||+|||+.++..+++.|++++++ |+|||+++|||+.++++.||++++|++ |+++|+|+. +++.+||+++
T Consensus 232 llDEPTsgLD~~~~~~i~~~L~~la~~~g~tvii~~Hq~~~~i~~l~D~v~~L~~-G~iv~~G~~----~~~~~yF~~l- 305 (1394)
T TIGR00956 232 CWDNATRGLDSATALEFIRALKTSANILDTTPLVAIYQCSQDAYELFDKVIVLYE-GYQIYFGPA----DKAKQYFEKM- 305 (1394)
T ss_pred EEeCCCCCcCHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHhhceEEEEeC-CeEEEECCH----HHHHHHHHHc-
Confidence 999999999999999999999999875 999999999998889999999999985 799999986 5789999998
Q ss_pred CCCCCCCCCCCcceEEEecchhhhh----------hhchhHHHHHhhcHHHHHHHHHHHhhcCCC---------------
Q 045902 1124 GVPKIRDGYNPATWVLEVSSNAVET----------QLNVDFAAIYADSDLYRRNQQLIKELSSPA--------------- 1178 (1472)
Q Consensus 1124 ~~~~~~~~~npa~~~l~~~~~~~~~----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~--------------- 1178 (1472)
|. +||++.|||||+++++++..+. ....++++.|++|+.+++..+.+++.....
T Consensus 306 G~-~~p~~~n~aDfl~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 384 (1394)
T TIGR00956 306 GF-KCPDRQTTADFLTSLTSPAERQIKPGYEKKVPRTPQEFETYWRNSPEYAQLMKEIDEYLDRCSESDTKEAYRESHVA 384 (1394)
T ss_pred CC-CCCCCCChHHHHHhccChhhhhccccccccCCCCHHHHHHHHHcCHHHHHHHHHHHHHhhhccchhhHHHHHHHHHh
Confidence 55 6999999999999998754211 123578999999998877666554322110
Q ss_pred CCCCCCcccccccchhHHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHH
Q 045902 1179 PGSKDLYFTTKYSQDFITQCKTCFWKQHWSYWRNPKYNAIRFFLTTVIGALFGMIFWDKGEKTSKEQDLINLLGAMYSAV 1258 (1472)
Q Consensus 1179 ~~~~~~~~~~~~~~~~~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~ 1258 (1472)
..++.....+.|..|+|+|+++|++|+++++||||.++.+|+++++++|+++|++||++++ ++++++++.|++|+++
T Consensus 385 ~~~~~~~~~~~~~~s~~~Q~~~l~~R~~~~~~Rd~~~~~~r~~~~ii~~li~G~~F~~~~~---~~~~~~~r~g~lf~~~ 461 (1394)
T TIGR00956 385 KQSKRTRPSSPYTVSFSMQVKYCLARNFLRMKGNPSFTLFMVFGNIIMALILSSVFYNLPK---NTSDFYSRGGALFFAI 461 (1394)
T ss_pred hhcccccCCCCCcCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCC---CchhHHHHHHHHHHHH
Confidence 0011112234688999999999999999999999999999999999999999999999986 4578999999999999
Q ss_pred HHHHHHhhhhHhHhHHHhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccHHHHHHHHHHHH
Q 045902 1259 LFLGASNASSVTSVVAIERTVFYRERAAGMYSSLTYAFAQVSIEAIYVSIQTIVYSLLLYSMIGFHWEVTKFLWFYFFML 1338 (1472)
Q Consensus 1259 ~~~~~~~~~~v~~~~~~er~v~~RE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~ 1338 (1472)
++.++.++..+. .+..||+||+|||.+++|++++|++|++++|+|+.++.+++|++|+|||+||++++.+||+|+++++
T Consensus 462 ~~~~~~~~~~i~-~~~~eR~i~~re~~~~~Y~~~ay~la~~l~~iP~~~~~~~if~~i~Yfm~gl~~~~~~Ff~f~l~~~ 540 (1394)
T TIGR00956 462 LFNAFSSLLEIA-SMYEARPIVEKHRKYALYHPSADAIASIISEIPFKIIESVVFNIILYFMVNFRRTAGRFFFYLLILF 540 (1394)
T ss_pred HHHHHHHHHHHH-HHHhcCcceeeeccccccCHHHHHHHHHHHHHHHHHHHHHHHHhhhEEcCCCcccHHHHHHHHHHHH
Confidence 999998876654 4557999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCccceee
Q 045902 1339 MCFMYFTLYGMMLVALTPNQQIATILMSFFLSFWNLFSGFMVPRTQIPIWWRWYYWASPVAWTIYGLVTSQIGDKVSEVE 1418 (1472)
Q Consensus 1339 ~~~~~~~~~g~~~~~~~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~ 1418 (1472)
++.++++++++++++++|+..+|+.++++++.++++|+||++|+++||+||+|++|+||++|+++|++.|||++...+|.
T Consensus 541 l~~~~~~~~~~~i~a~~~~~~~A~~~~~~~~~~~~lf~Gf~i~~~~mp~~~~W~~yisp~~yafeal~~nef~~~~~~C~ 620 (1394)
T TIGR00956 541 ICTLAMSHLFRSIGAVTKTLSEAMTPAAILLLALSIYTGFAIPRPSMLGWSKWIYYVNPLAYAFESLMVNEFHGRRFECS 620 (1394)
T ss_pred HHHHHHHHHHHHHHHhcCCHHHHHHHHHHHHHHHHHHcccccChhhccHHHHHHHHcCHHHHHHHHHHHhhhcCCccccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999998765442
Q ss_pred --cc----------------------CCCcccHHHHHHhhcCCccCchhHHHHHHHHHHHHHHHHHHHHHHhccc
Q 045902 1419 --VA----------------------GESGITVKEYLYKHYGYDYDFLGAVAAAHIGFVVLFFFVFVYGIKFLNF 1469 (1472)
Q Consensus 1419 --~~----------------------~~~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~ 1469 (1472)
+| |...+++.+|++..||++++++|++++++++|+++|+++++++++++++
T Consensus 621 ~~~p~g~~y~~~~~~~~~C~~~g~~~g~~~~~G~~~L~~~~~~~~~~~w~n~gil~~~~v~f~~~~~l~l~~~~~ 695 (1394)
T TIGR00956 621 QYVPSGGGYDNLGVTNKVCTVVGAEPGQDYVDGDDYLKLSFQYYNSHKWRNFGIIIGFTVFFFFVYILLTEFNKG 695 (1394)
T ss_pred ccccCCCCCCCCCccCccccCCCCcCCcccccHHHHHHhcCCcccchhhHHHHHHHHHHHHHHHHHHHHHHhccc
Confidence 01 1112467899998899999999999999999999999999999999873
No 8
>PLN03140 ABC transporter G family member; Provisional
Probab=100.00 E-value=7.2e-88 Score=910.82 Aligned_cols=587 Identities=23% Similarity=0.392 Sum_probs=496.4
Q ss_pred ccceEEEEeceeeEEeccch-----------------hhc-cc---cccccceeeccceeEEeCCeEEEEEcCCCCChhH
Q 045902 873 FQPLSLAFDHVNYFVDMPAE-----------------MKS-QG---IEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTT 931 (1472)
Q Consensus 873 ~~~~~~~~~~~~~~~~~~~~-----------------~~~-~~---~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTT 931 (1472)
...+.+.|+|+++..+.... ... .+ .+..++.+|+|||+.++|||+++|+|||||||||
T Consensus 127 ~~~~~v~~~~l~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~k~~~~~IL~~vs~~i~~Ge~~~llGpnGSGKST 206 (1470)
T PLN03140 127 LPTVEVRFEHLTVEADCYIGSRALPTLPNAARNIAESALGMLGINLAKKTKLTILKDASGIIKPSRMTLLLGPPSSGKTT 206 (1470)
T ss_pred CCCCeeEEeCCEEEEEecCCcccCCcHHHHHHHHHHHHHHHhccccCCCccceeccCCeEEEeCCeEEEEEcCCCCCHHH
Confidence 34677899999887652110 000 01 1223577999999999999999999999999999
Q ss_pred HHhhhcCCCCCC-eeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCc-----------h----
Q 045902 932 LMDVLAGRKTGG-YIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPK-----------D---- 995 (1472)
Q Consensus 932 Ll~~L~g~~~~~-~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~-----------~---- 995 (1472)
||++|+|+.++. ..+|+|.+||++..+...++.++||+|+|.|++.+||+|+|.|++.++.+. +
T Consensus 207 LLk~LaG~l~~~~~~~G~I~~nG~~~~~~~~~~~i~yv~Q~d~~~~~lTV~EtL~f~a~~~~~~~~~~~~~~~~~~ek~~ 286 (1470)
T PLN03140 207 LLLALAGKLDPSLKVSGEITYNGYRLNEFVPRKTSAYISQNDVHVGVMTVKETLDFSARCQGVGTRYDLLSELARREKDA 286 (1470)
T ss_pred HHHHHhCCCCCCCcceeEEEECCEechhhcccceeEEecccccCCCcCcHHHHHHHHHHhcCCCCcccchhhcCHHHHhc
Confidence 999999987542 358999999998754444677999999999999999999999988765210 0
Q ss_pred -----------------------HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 996 -----------------------MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 996 -----------------------~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
..++++++.+||.+++|+.+|+..+++|||||||||+||++|+.+|++|||||||+|
T Consensus 287 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~L~~lGL~~~~~t~vg~~~~rglSGGerkRVsia~aL~~~p~vlllDEPTsG 366 (1470)
T PLN03140 287 GIFPEAEVDLFMKATAMEGVKSSLITDYTLKILGLDICKDTIVGDEMIRGISGGQKKRVTTGEMIVGPTKTLFMDEISTG 366 (1470)
T ss_pred cCCCchhhHHHHHHhhhhcchhhHHHHHHHHHcCCccccCceeCCccccCCCcccceeeeehhhhcCCCcEEEEeCCCcC
Confidence 024678999999999999999888899999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCCCCCCCC
Q 045902 1053 LDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGRQSHKLVEYFEAVPGVPKIRDG 1131 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~~~~~~~~~f~~~~~~~~~~~~ 1131 (1472)
||+.++..+++.|+++++ .|+|||+++|||+.++++.||++++|.+ |+++|+||. +++.+||+++ |. +||++
T Consensus 367 LDs~t~~~i~~~Lr~la~~~g~Tviis~Hqp~~~i~~lfD~vilL~~-G~ivy~G~~----~~~~~yF~~l-Gf-~cP~~ 439 (1470)
T PLN03140 367 LDSSTTYQIVKCLQQIVHLTEATVLMSLLQPAPETFDLFDDIILLSE-GQIVYQGPR----DHILEFFESC-GF-KCPER 439 (1470)
T ss_pred ccHHHHHHHHHHHHHHHHhcCCEEEEEecCCCHHHHHHhheEEEeeC-ceEEEeCCH----HHHHHHHHHc-CC-CCCCC
Confidence 999999999999999986 4899999999998889999999999985 799999996 5789999998 55 69999
Q ss_pred CCCcceEEEecchhhh-h-----------hhchhHHHHHhhcHHHHHHHHHHHhhcCCCCCCCCCcccccccchhHHHHH
Q 045902 1132 YNPATWVLEVSSNAVE-T-----------QLNVDFAAIYADSDLYRRNQQLIKELSSPAPGSKDLYFTTKYSQDFITQCK 1199 (1472)
Q Consensus 1132 ~npa~~~l~~~~~~~~-~-----------~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Q~~ 1199 (1472)
.|||||++|+++.... . ....++++.|++|+.+++..+.++.........+.....++|..+++.|++
T Consensus 440 ~n~ADFl~~v~s~~~~~~~~~~~~~p~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~s~~~q~~ 519 (1470)
T PLN03140 440 KGTADFLQEVTSKKDQEQYWADRNKPYRYISVSEFAERFKSFHVGMQLENELSVPFDKSQSHKAALVFSKYSVPKMELLK 519 (1470)
T ss_pred CChHHHHHHhcCchhhhhhhhccCCccccCCHHHHHHHHHhcHHHHHHHHHHhhhhhhhhcccccccCCCCcCCHHHHHH
Confidence 9999999999875322 1 112468899999988776554433211000111111123468999999999
Q ss_pred HHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhHhHhHHHhhhH
Q 045902 1200 TCFWKQHWSYWRNPKYNAIRFFLTTVIGALFGMIFWDKGEKTSKEQDLINLLGAMYSAVLFLGASNASSVTSVVAIERTV 1279 (1472)
Q Consensus 1200 ~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~~er~v 1279 (1472)
.|++|+++.+||||.++..|+++.+++|+++|++||+++.+..+..+.+..+|++|+++++..++++.. ++.+..||+|
T Consensus 520 ~~~~R~~~~~~Rd~~~~~~r~~~~ii~ali~GsvF~~~~~~~~~~~~~~~~~g~lff~~l~~~~~~~~~-l~~~~~~r~v 598 (1470)
T PLN03140 520 ACWDKEWLLMKRNAFVYVFKTVQIIIVAAIASTVFLRTEMHTRNEEDGALYIGALLFSMIINMFNGFAE-LALMIQRLPV 598 (1470)
T ss_pred HHHHHHHHHHhCCHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHHHHHHHHHHH-HHHHHhccch
Confidence 999999999999999999999999999999999999998655555566778899999998888776654 5777899999
Q ss_pred HHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCHH
Q 045902 1280 FYRERAAGMYSSLTYAFAQVSIEAIYVSIQTIVYSLLLYSMIGFHWEVTKFLWFYFFMLMCFMYFTLYGMMLVALTPNQQ 1359 (1472)
Q Consensus 1280 ~~RE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~~p~~~ 1359 (1472)
|+|||.+++|++++|++|++++|+|+.++.+++|.+|+|||+||++++++||.|+++++++.++++++++++++++|+..
T Consensus 599 f~ker~~~~Y~~~ay~la~~l~~iP~~~i~~~if~~I~Y~m~Gl~~~~~~Ff~f~l~~~l~~~~~~~l~~~i~a~~~~~~ 678 (1470)
T PLN03140 599 FYKQRDLLFHPPWTFTLPTFLLGIPISIIESVVWVVITYYSIGFAPEASRFFKQLLLVFLIQQMAAGIFRLIASVCRTMI 678 (1470)
T ss_pred hHHhhhccCcCHHHHHHHHHHHHHHHHHHHHHHHHhHHhhhcCCCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHcCcHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCccce-eeccCCCcccHHHHHHhhcCCc
Q 045902 1360 IATILMSFFLSFWNLFSGFMVPRTQIPIWWRWYYWASPVAWTIYGLVTSQIGDKVSE-VEVAGESGITVKEYLYKHYGYD 1438 (1472)
Q Consensus 1360 ~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~-~~~~~~~~~~~~~~l~~~~g~~ 1438 (1472)
+|+.++++++.++++|+||++|+++||+||+|+||+||++|+++|+++|||.+.... +.+.+....++.+|| +.||++
T Consensus 679 ~A~~~~~~~~l~~~lf~Gf~i~~~~ip~w~~W~~yisp~~Ya~eal~~NEf~~~~~~~~~~~~~~~~~G~~~L-~~~g~~ 757 (1470)
T PLN03140 679 IANTGGALVLLLVFLLGGFILPKGEIPNWWEWAYWVSPLSYGFNALAVNEMFAPRWMNKMASDNSTRLGTAVL-NIFDVF 757 (1470)
T ss_pred HHHHHHHHHHHHHHHHccceechHhCchHHHHHHHhCHHHHHHHHHHHHhccCccccCcccCCCCcccHHHHH-HhcCcC
Confidence 999999999999999999999999999999999999999999999999999765432 112222234455666 678997
Q ss_pred cC--chhHHHHHHHHHHHHHHHHHHHHHHhcc
Q 045902 1439 YD--FLGAVAAAHIGFVVLFFFVFVYGIKFLN 1468 (1472)
Q Consensus 1439 ~~--~~~~~~~il~~~~~~f~~~~~~~~~~~~ 1468 (1472)
.+ |+|+++++|+||+++|.+++++++++++
T Consensus 758 ~~~~~~w~~~~iL~~~~v~f~~l~~l~L~~~~ 789 (1470)
T PLN03140 758 TDKNWYWIGVGALLGFTILFNVLFTLALTYLN 789 (1470)
T ss_pred ccccchhhhHHHHHHHHHHHHHHHHHHHHhcC
Confidence 54 6799999999999999999999999987
No 9
>KOG0061 consensus Transporter, ABC superfamily (Breast cancer resistance protein) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=1.3e-82 Score=799.78 Aligned_cols=584 Identities=30% Similarity=0.503 Sum_probs=494.5
Q ss_pred CCcceEEEeeeEEEEEEecCCCcCCChhHhHHHHHHhhhhhcccccCCcccceeeeceeeEEeCCeEEEEEcCCCCcHHH
Q 045902 135 IPKIEVRFENLSIEGDAYVGTRALPTLLNTSLNAIEGVLGFLRLFPSKKRKLEILHDVSGIVKPSRMTLLLGPPGSGKTT 214 (1472)
Q Consensus 135 ~p~~~v~f~~L~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKST 214 (1472)
...++++|+|+++++... .+..+++|+||||.++|||++||+||+||||||
T Consensus 21 ~~~~~~~~~~~~~~~~~~-----------------------------~~~~k~iL~~vsg~~~~Gel~AimG~SGsGKtT 71 (613)
T KOG0061|consen 21 LEPVKLSFRNLTLSSKEK-----------------------------SKKTKTILKGVSGTAKPGELLAIMGPSGSGKTT 71 (613)
T ss_pred cccceeEEEEEEEEecCC-----------------------------CCccceeeeCcEEEEecCeEEEEECCCCCCHHH
Confidence 456789999999987532 114578999999999999999999999999999
Q ss_pred HHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhc
Q 045902 215 LLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDA 294 (1472)
Q Consensus 215 LL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~ 294 (1472)
||++|+|+..+...++|+|++||++.+....++.+|||.|+|.++|++||+|||.|+|+++.+.. +++.++
T Consensus 72 LL~~Lagr~~~~~~~~G~ilvNG~~~~~~~~~~~s~yV~QdD~l~~~LTV~EtL~f~A~lrlp~~-------~~~~~k-- 142 (613)
T KOG0061|consen 72 LLNALAGRLNGGLKLSGEILLNGRPRDSRSFRKISGYVQQDDVLLPTLTVRETLRFSALLRLPSS-------LSKEEK-- 142 (613)
T ss_pred HHHHHhccccCCCcceEEEEECCccCchhhhhheeEEEcccccccccccHHHHHHHHHHhcCCCC-------CCHHHH--
Confidence 99999999987677899999999887776677899999999999999999999999999876532 222222
Q ss_pred CCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCC
Q 045902 295 GIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTG 374 (1472)
Q Consensus 295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsg 374 (1472)
+..+|.+++.|||++|+||++|+...|||||||||||+||..|+.+|+|||+||||||
T Consensus 143 ----------------------~~~V~~vi~~LgL~~~~~t~ig~~~~rgiSGGErkRvsia~Ell~~P~iLflDEPTSG 200 (613)
T KOG0061|consen 143 ----------------------RERVEEVISELGLEKCADTLIGNPGIRGLSGGERKRVSIALELLTDPSILFLDEPTSG 200 (613)
T ss_pred ----------------------HHHHHHHHHHcCChhhccceecCCCCCccccchhhHHHHHHHHHcCCCEEEecCCCCC
Confidence 2247889999999999999999998999999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 045902 375 LDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQGPREYVLDFFESVGFRCPERKGAADFL 454 (1472)
Q Consensus 375 LDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl 454 (1472)
||+.++.++++.|+++|+. |+|||+++|||+.+++++||++++|++|+++|+|+++++.+||+++|++||++.||+||+
T Consensus 201 LDS~sA~~vv~~Lk~lA~~-grtVi~tIHQPss~lf~lFD~l~lLs~G~~vy~G~~~~~~~ff~~~G~~~P~~~Npadf~ 279 (613)
T KOG0061|consen 201 LDSFSALQVVQLLKRLARS-GRTVICTIHQPSSELFELFDKLLLLSEGEVVYSGSPRELLEFFSSLGFPCPELENPADFL 279 (613)
T ss_pred cchhhHHHHHHHHHHHHhC-CCEEEEEEeCCcHHHHHHHhHhhhhcCCcEEEecCHHHHHHHHHhCCCCCCCcCChHHHH
Confidence 9999999999999999997 999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHhhCcc--cchhhhcccCCCCcCCChhHHHHHHH-hchhhhhhhhhhcCCCCCCCCCCCCCCcCcccccHHHHHHHHHH
Q 045902 455 QEVTSRK--DQQQYWCKKNEPYRYVSVPEFVEHFK-TFHVGQKLTDELRVPYDKSKTHPAGLVKKRYGISNWELFKTCFA 531 (1472)
Q Consensus 455 ~ev~s~~--~~~~~~~~~~~~~~~~s~~e~~~~f~-~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~ 531 (1472)
.++.+.. .+..... ....+..+.++ .....+... ......... . ........++|.|+..+++
T Consensus 280 l~l~s~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~---~~~~~~~~s~~~q~~~L~~ 345 (613)
T KOG0061|consen 280 LDLLSVDSGTRELEEA--------VRIAKLINKFSQTDNLKKTLE-ALEKSLSTS--K---KVEIGTSPSWWTQFKILLK 345 (613)
T ss_pred HHHHccCCCchhHHhH--------HHHHHHhhhccccchhhhhHH-HHhhhcccc--c---ccccccCCcHHHHHHHHHH
Confidence 9988843 1110000 00001111111 000000000 000000000 0 0001116799999999999
Q ss_pred HHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhhHHHHHHHHHHHHHHH-HHHHHhhhhHHHHHh
Q 045902 532 REWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYGALFFSLVNVMFNGMA-ELALTIVRLPAFYKQ 610 (1472)
Q Consensus 532 R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g~lff~l~~~~~~~~~-~~~~~~~~~~vf~kq 610 (1472)
|.+..++|++.++..|.++.+++++++|.+|++.+.+.... ....|.+||.+.+..+..+. .++....++++|.||
T Consensus 346 R~~~~~~R~~~~~~~r~~~~~~~~~~lg~~~~~~~~~~~~~---~~~~g~~~~~~~~~~f~~~~~~i~~f~~e~~~f~rE 422 (613)
T KOG0061|consen 346 RSLKNIRRDPSLLLLRLIQSLVTGLLLGLLYLNLGNDAKGI---QNRLGLFFFILSFMTFLSMFGAVPVFPQERPIFLRE 422 (613)
T ss_pred HHhHHHhhcHHHHHHHHHHHHHHHHHHHHHhhCCCCchHHH---HHHHHHHHHHHHHHHHHHHHhHHHHhHHHHHHHHHH
Confidence 99999999999999999999999999999999986544333 25678888888888776666 577888999999999
Q ss_pred hcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHH
Q 045902 611 RDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQLLAFFSVHQMGLSLFRFIAAVSRTQVVANT 690 (1472)
Q Consensus 611 r~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~ 690 (1472)
+..+.|+.++|++|+.+.++|+.++.+++|.+++|||+|++++..+|+.+++..++...++.+++.+++++.++...|.+
T Consensus 423 ~~~~~Y~~s~y~la~~l~~lP~~~i~~~if~~i~Y~m~gl~~~~~~f~~~~l~~~~~~~~a~s~~~~i~~~~~~~~~a~~ 502 (613)
T KOG0061|consen 423 TSSGLYRLSSYYLAKTLAELPFLLVLSIIFSSIVYWMVGLNPGLSRFLYFLLIILLSSLVAESLGLFISAIVPNLSLATS 502 (613)
T ss_pred HhcCchhHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhccchhheee
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCCCCCCCCCCCcccCCcchHHHHHhhcCCccc
Q 045902 691 LGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDERWSAPNPARFLVDEPTVGKALLKARGMYTE 770 (1472)
Q Consensus 691 ~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~ 770 (1472)
+++++++.+++++||+++.+.+|.||.|+.|+|+..|++|+++.|||.+....|..... .++...|..+++..++...
T Consensus 503 ~~~~~~~~f~l~~G~fi~~~~ip~~~~w~~~~S~~ry~~e~l~~n~~~~~~~~~~~~~~--~~~~~~~~~~l~~~~~~~~ 580 (613)
T KOG0061|consen 503 LGPVLLLPFLLFGGFFINFDSIPKYFRWISYLSYFRYAFEALLINQFSGGSSRCFLSGN--LCCESTGEDVLKQLGFEDS 580 (613)
T ss_pred hHHHHHHHHHHHhhhhcCcccccHHHHHHHHHhHHHHHHHHHHHHHhhccccccccCcC--CcccccHHHHHHhcCCccc
Confidence 99999999999999999999999999999999999999999999999974344432211 2567889999999998765
Q ss_pred chhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 045902 771 DHMFWICIVALLGFSLFFNLCFIAALTYLD 800 (1472)
Q Consensus 771 ~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~ 800 (1472)
+ .|.++.+++++.++|.++++++|++..
T Consensus 581 ~--~~~~l~~l~~~~~~~~il~y~~L~~~~ 608 (613)
T KOG0061|consen 581 S--FWLDLLVLLAFIVFFRVLGYLALRFRV 608 (613)
T ss_pred c--cchhHHHHHHHHHHHHHHHHHHHHhhc
Confidence 5 689999999999999999999998754
No 10
>TIGR00955 3a01204 The Eye Pigment Precursor Transporter (EPP) Family protein.
Probab=100.00 E-value=7e-82 Score=803.33 Aligned_cols=573 Identities=26% Similarity=0.465 Sum_probs=486.0
Q ss_pred CcccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCC
Q 045902 182 KKRKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGE 261 (1472)
Q Consensus 182 ~~~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 261 (1472)
++.++++|+|+|+.++|||+++|+|||||||||||++|+|+.+++...+|+|.+||++++....++.++||+|+|.++++
T Consensus 34 ~~~~~~iL~~vs~~i~~Ge~~aI~G~sGsGKSTLL~~L~g~~~~~~~~~G~i~~~g~~~~~~~~~~~i~yv~Q~~~~~~~ 113 (617)
T TIGR00955 34 ERPRKHLLKNVSGVAKPGELLAVMGSSGAGKTTLMNALAFRSPKGVKGSGSVLLNGMPIDAKEMRAISAYVQQDDLFIPT 113 (617)
T ss_pred ccCccccccCCEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCcceeEEEECCEECCHHHHhhhceeeccccccCcc
Confidence 34467899999999999999999999999999999999999877555689999999988654446789999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+|||.|+++++.+.. ..+.++ ...++.+++.+||++++||.||++.
T Consensus 114 lTV~e~l~f~~~~~~~~~-------~~~~~~------------------------~~~v~~~l~~lgL~~~~~t~vg~~~ 162 (617)
T TIGR00955 114 LTVREHLMFQAHLRMPRR-------VTKKEK------------------------RERVDEVLQALGLRKCANTRIGVPG 162 (617)
T ss_pred CcHHHHHHHHHhcCCCCC-------CCHHHH------------------------HHHHHHHHHHcCchhcCcCccCCCC
Confidence 999999999987754321 011111 1135778999999999999999863
Q ss_pred -CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 342 -RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 342 -~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
.++|||||||||+||++|+.+|+++||||||+|||+.++.++++.|+++++ .|+|+|+++|||+.+++++||++++|+
T Consensus 163 ~~~~LSgGqrkRvsia~aL~~~p~vlllDEPtsgLD~~~~~~l~~~L~~l~~-~g~tvi~~~hq~~~~i~~~~D~i~ll~ 241 (617)
T TIGR00955 163 RVKGLSGGERKRLAFASELLTDPPLLFCDEPTSGLDSFMAYSVVQVLKGLAQ-KGKTIICTIHQPSSELFELFDKIILMA 241 (617)
T ss_pred CCCCcCcchhhHHHHHHHHHcCCCEEEeeCCCcchhHHHHHHHHHHHHHHHh-CCCEEEEEeCCCCHHHHHHhceEEEee
Confidence 789999999999999999999999999999999999999999999999986 589999999999999999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhc
Q 045902 421 EGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELR 500 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~ 500 (1472)
+|+++|+|+++++.+||+++|++||++.||+||+.++++....... . .....+++.+.|++++.+++..++..
T Consensus 242 ~G~~v~~G~~~~~~~~f~~~g~~~p~~~n~ad~~~~~~~~~~~~~~-----~--~~~~~~~~~~~~~~s~~~~~~~~~~~ 314 (617)
T TIGR00955 242 EGRVAYLGSPDQAVPFFSDLGHPCPENYNPADFYVQVLAVIPGSEN-----E--SRERIEKICDSFAVSDIGRDMLVNTN 314 (617)
T ss_pred CCeEEEECCHHHHHHHHHHcCCCCCCCCChHHHHHHHhhcCccccc-----c--hHHHHHHHHHHHhcchhhHHHHHHhh
Confidence 9999999999999999999999999999999999999875432110 0 11224566677777665554443332
Q ss_pred CCCCCCC---CCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccc
Q 045902 501 VPYDKSK---THPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGK 577 (1472)
Q Consensus 501 ~~~~~~~---~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~ 577 (1472)
....... .........++..+++.|+..+++|.++..+||+..+..++++.+++++++|++|++.+.+.. +.+.
T Consensus 315 ~~~~~~~~~~~~~~~~~~~~~~~~~~~q~~~l~~R~~~~~~R~~~~~~~~~~~~i~~~li~G~~f~~~~~~~~---~~~~ 391 (617)
T TIGR00955 315 LWSGKAGGLVKDSENMEGIGYNASWWTQFYALLKRSWLSVLRDPLLLKVRLIQTMMTAILIGLIYLGQGLTQK---GVQN 391 (617)
T ss_pred hhhccccccccccccccccccCCCHHHHHHHHHHHHHHHHhcCHHHHHHHHHHHHHHHHHHHHhhcCCCCCHH---HHHH
Confidence 1111100 000111234567889999999999999999999999999999999999999999999875443 3345
Q ss_pred hhhHHHHHHHHHHHHHHHH-HHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHH
Q 045902 578 FYGALFFSLVNVMFNGMAE-LALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATR 656 (1472)
Q Consensus 578 ~~g~lff~l~~~~~~~~~~-~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ 656 (1472)
..|++|+.++..+|.++.. +.....++++|+|||..++|++++|++++.+.++|+.++.+++|.+++|||+|+.+++.+
T Consensus 392 ~~g~lf~~~~~~~f~~~~~~~~~f~~er~v~~rE~~~~~Y~~~~y~la~~l~~lp~~~~~~~if~~i~Y~~~gl~~~~~~ 471 (617)
T TIGR00955 392 INGALFLFLTNMTFQNVFPVINVFTAELPVFLRETRSGLYRVSAYFLAKTIAELPLFIILPALFTSITYWMIGLRSGATH 471 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccCHHHHHHHHHHHHHHHHHHHHHHHHhhhheeccCCccHHH
Confidence 6789999998888876644 556668999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHh
Q 045902 657 FFRQLLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNE 736 (1472)
Q Consensus 657 ff~~~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~ne 736 (1472)
||.+++++++.+.++.++++++++++++..+|+.+++++++++++++||+++.++||+||+|++|+||++|+++++++||
T Consensus 472 f~~f~l~~~l~~~~~~s~~~~i~~~~~~~~~a~~~~~~~~~~~~lf~G~~i~~~~ip~~~~W~~~isp~~ya~~al~~ne 551 (617)
T TIGR00955 472 FLTFLFLVTLVANVATSFGYLISCAFSSTSMALTVGPPFVIPFLLFGGFFINSDSIPVYFKWLSYLSWFRYGNEGLLINQ 551 (617)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHhhcccChhhccHHHHHHHHcCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred hcCCCC-CCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhc
Q 045902 737 FLDERW-SAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYL 799 (1472)
Q Consensus 737 f~~~~~-~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~ 799 (1472)
|.+..+ .|...+.. ..|...|..+++.+|+...+ +|.++++++++.++|.++++++|++.
T Consensus 552 f~~~~~~~c~~~~~~-~~c~~~g~~~l~~~g~~~~~--~~~~~~il~~~~~~~~~l~~~~L~~~ 612 (617)
T TIGR00955 552 WSDVDNIECTSANTT-GPCPSSGEVILETLSFRNAD--LYLDLIGLVILIFFFRLLAYFALRIR 612 (617)
T ss_pred hCCCccccccCcCcC-CCCCcChHHHHHhcCCCccc--HHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 998776 44322111 12445689999999987654 58999999999999999999999874
No 11
>PLN03211 ABC transporter G-25; Provisional
Probab=100.00 E-value=8.4e-81 Score=791.72 Aligned_cols=609 Identities=22% Similarity=0.337 Sum_probs=473.1
Q ss_pred CCCcceEEEeeeEEEEEEecCCCcCCChhHhHHHHHHhhhhhcccccCCcccceeeeceeeEEeCCeEEEEEcCCCCcHH
Q 045902 134 EIPKIEVRFENLSIEGDAYVGTRALPTLLNTSLNAIEGVLGFLRLFPSKKRKLEILHDVSGIVKPSRMTLLLGPPGSGKT 213 (1472)
Q Consensus 134 ~~p~~~v~f~~L~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKS 213 (1472)
..++++++|+|+++++.......+... +...+......... ..+..++++|+|+|+.++|||+++|+||||||||
T Consensus 34 ~~~~~~~~~~~~~y~~~~~~~~~~~~~----~~~~~~~~~~~~~l-~~~~~~~~iL~~vs~~i~~Ge~~aI~GpnGaGKS 108 (659)
T PLN03211 34 SCYPITLKFMDVCYRVKFENMKNKGSN----IKRILGHKPKISDE-TRQIQERTILNGVTGMASPGEILAVLGPSGSGKS 108 (659)
T ss_pred CCCceEEEEEeEEEEEccCCCcccccc----cccccccccccccc-cccCCCCeeeeCCEEEEECCEEEEEECCCCCCHH
Confidence 346799999999999754310111110 11111000000000 0112346799999999999999999999999999
Q ss_pred HHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHh
Q 045902 214 TLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKD 293 (1472)
Q Consensus 214 TLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~ 293 (1472)
|||++|+|+.+++ ..+|+|.+||+++... .++.++||+|+|.+++.+||+||+.|++.++.+.. .++.++
T Consensus 109 TLL~iLaG~~~~~-~~sG~I~inG~~~~~~-~~~~i~yv~Q~~~l~~~lTV~E~l~~~a~~~~~~~-------~~~~~~- 178 (659)
T PLN03211 109 TLLNALAGRIQGN-NFTGTILANNRKPTKQ-ILKRTGFVTQDDILYPHLTVRETLVFCSLLRLPKS-------LTKQEK- 178 (659)
T ss_pred HHHHHHhCCCCCC-ceeEEEEECCEECchh-hccceEEECcccccCCcCCHHHHHHHHHHhCCCCC-------CCHHHH-
Confidence 9999999998764 2589999999987542 23569999999999999999999999875532210 001010
Q ss_pred cCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCC
Q 045902 294 AGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEIST 373 (1472)
Q Consensus 294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEpts 373 (1472)
...++.+++.+||++|+||.+|+...++|||||||||+||++|+.+|++|+|||||+
T Consensus 179 -----------------------~~~v~~~l~~lgL~~~~~t~vg~~~~~~LSgGerqRv~ia~aL~~~P~iLlLDEPts 235 (659)
T PLN03211 179 -----------------------ILVAESVISELGLTKCENTIIGNSFIRGISGGERKRVSIAHEMLINPSLLILDEPTS 235 (659)
T ss_pred -----------------------HHHHHHHHHHcCChhhcCceeCCCCCCCcChhhhhHHHHHHHHHhCCCEEEEeCCCC
Confidence 012467899999999999999999999999999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChHHH
Q 045902 374 GLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQGPREYVLDFFESVGFRCPERKGAADF 453 (1472)
Q Consensus 374 gLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adf 453 (1472)
|||+.++.++++.|+++++ .|+|+|+++|||+.+++++||+|++|++|+++|+|+.+++.+||+++||+||++.|||||
T Consensus 236 gLD~~~~~~l~~~L~~l~~-~g~TvI~~sH~~~~~i~~~~D~iilL~~G~iv~~G~~~~~~~~f~~~G~~~P~~~NpADf 314 (659)
T PLN03211 236 GLDATAAYRLVLTLGSLAQ-KGKTIVTSMHQPSSRVYQMFDSVLVLSEGRCLFFGKGSDAMAYFESVGFSPSFPMNPADF 314 (659)
T ss_pred CcCHHHHHHHHHHHHHHHh-CCCEEEEEecCCCHHHHHhhceEEEecCCcEEEECCHHHHHHHHHHCCCCCCCCCCHHHH
Confidence 9999999999999999987 589999999999988999999999999999999999999999999999999999999999
Q ss_pred HHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhcC---CCCCCC-----CCCC-CCCcCcccccHHH
Q 045902 454 LQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELRV---PYDKSK-----THPA-GLVKKRYGISNWE 524 (1472)
Q Consensus 454 l~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~~---~~~~~~-----~~~~-~~~~~~~~~s~~~ 524 (1472)
+.++++...+.+.......+ ...+++.+.|++... +...++... +....+ .... ......+..++|+
T Consensus 315 ~ldv~~~~~~~~~~~~~~~~---~~~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~ 390 (659)
T PLN03211 315 LLDLANGVCQTDGVSEREKP---NVKQSLVASYNTLLA-PKVKAAIEMSHFPQANARFVGSASTKEHRSSDRISISTWFN 390 (659)
T ss_pred HHHHcCccccCCCccccccc---hHHHHHHHHHHhhcc-HHHHHHHhhhhhhcchhhhhhcccccccccCCCccCCCHHH
Confidence 99998864321100000011 112334455543211 111111100 000000 0000 0011234568999
Q ss_pred HHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhhHHHHHHHHHHH-HHHHHHHHHhhh
Q 045902 525 LFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYGALFFSLVNVMF-NGMAELALTIVR 603 (1472)
Q Consensus 525 ~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g~lff~l~~~~~-~~~~~~~~~~~~ 603 (1472)
|+..+++|.++. +|+..+...|+++.+++|+++|++|++.+ . .+.+.+.|++||.+++.++ ..+..++.+..+
T Consensus 391 Q~~~L~~R~~~~-~r~~~~~~~r~~~~i~~~ll~G~lf~~~~--~---~~~~~r~g~lff~~~~~~~~~~~~~~~~f~~e 464 (659)
T PLN03211 391 QFSILLQRSLKE-RKHESFNTLRVFQVIAAALLAGLMWWHSD--F---RDVQDRLGLLFFISIFWGVFPSFNSVFVFPQE 464 (659)
T ss_pred HHHHHHHHHHHH-HhCcHHHHHHHHHHHHHHHHHHHHHhcCC--H---HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999888 78888888999999999999999999874 1 2345678999999887655 556777778889
Q ss_pred hHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcc
Q 045902 604 LPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQLLAFFSVHQMGLSLFRFIAAVSR 683 (1472)
Q Consensus 604 ~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~l~~~~~~~~~~sl~r~iaa~~~ 683 (1472)
|++|+|||..++|++++|++|+++.++|+.++.+++|.+|+|||+|+++++.+||.+++++++.+.++.+++++++++++
T Consensus 465 r~v~~rE~~~~~Y~~~~Y~la~~l~elP~~~~~~~if~~i~Y~m~Gl~~~~~~F~~f~li~~l~~~~~~s~g~~i~a~~~ 544 (659)
T PLN03211 465 RAIFVKERASGMYTLSSYFMARIVGDLPMELILPTIFLTVTYWMAGLKPELGAFLLTLLVLLGYVLVSQGLGLALGAAIM 544 (659)
T ss_pred hHHHHHhhhCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhheeEcCCCcCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred chHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCCC-----CCCCCCC-CcccCCcch
Q 045902 684 TQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDER-----WSAPNPA-RFLVDEPTV 757 (1472)
Q Consensus 684 ~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~~-----~~~~~~~-~~~~~~~~~ 757 (1472)
+..+|+++++++++++++|+||+++ +||+||+|++|+||++|+++++++|||.+.+ ..|..+. .....|...
T Consensus 545 ~~~~a~~~~~~~~~~~~lfsGf~i~--~ip~~~~W~~ylS~~~y~~eal~~nef~~~~~~~~~~~C~~~~~~~~~~c~~~ 622 (659)
T PLN03211 545 DAKKASTIVTVTMLAFVLTGGFYVH--KLPSCMAWIKYISTTFYSYRLLINVQYGEGKRISSLLGCSLPHGSDRASCKFV 622 (659)
T ss_pred CHHHHHHHHHHHHHHHHHHhhhhHh--hchHHHHHHHHhCHHHHHHHHHHHHhcCCccccccccCCCCcccCCCCCCccc
Confidence 9999999999999999999999996 7999999999999999999999999997653 2343211 000012222
Q ss_pred HHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcC
Q 045902 758 GKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLD 800 (1472)
Q Consensus 758 G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~ 800 (1472)
+...+. ....|.++++|+++.++|.++.+++|++.+
T Consensus 623 ~~~~~~-------~~~~~~~~~~l~~~~~~~~~l~~~~L~~~~ 658 (659)
T PLN03211 623 EEDVAG-------QISPATSVSVLIFMFVGYRLLAYLALRRIK 658 (659)
T ss_pred hhhhhc-------ccchHHHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 332322 234788999999999999999999998654
No 12
>KOG0065 consensus Pleiotropic drug resistance proteins (PDR1-15), ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=3.1e-81 Score=788.74 Aligned_cols=560 Identities=25% Similarity=0.477 Sum_probs=498.4
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCccCChhcccceeEEeccCCCCCCCCC
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-YIEGSISISGYPKKQETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
...++|+|+|+-++||+++.++||+||||||||++|+|..+.. ...|+|.+||++.++...++.++|+.|+|.|+|.+|
T Consensus 126 ~~~~il~~~sg~~~pg~m~lvLG~pgsG~ttllkal~g~~~~~~~~~~~isy~G~~~~e~~~~~~~aY~~e~DvH~p~lT 205 (1391)
T KOG0065|consen 126 KKIQILKDISGIIKPGEMTLVLGPPGSGKTTLLKALAGKLDNFLKSSGEITYNGHDLKEFVPKKTVAYNSEQDVHFPELT 205 (1391)
T ss_pred ccceeecCcceeEcCCceEEEecCCCCchHHHHHHHhCCCcccccCCCceeECCCcccccccCceEEeccccccccceeE
Confidence 3468999999999999999999999999999999999975432 236799999999766444788999999999999999
Q ss_pred HHHHHHHHHHcCCCch--------H----HHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 045902 980 IYESLLYSAWLRLPKD--------M----FVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMD 1047 (1472)
Q Consensus 980 v~e~l~~~~~l~~~~~--------~----~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LD 1047 (1472)
|+|+|.|+++++.+.. + ..+.+++.+||.+++|+++|+...+|+||||||||+||.+++.+|+++++|
T Consensus 206 VreTldFa~rck~~~~r~~~~~R~e~~~~~~d~~lkilGL~~~~dT~VGnd~~RGvSGGerKRvsi~E~~v~~~~~~~~D 285 (1391)
T KOG0065|consen 206 VRETLDFAARCKGPGSRYDEVSRREKLAAMTDYLLKILGLDHCADTLVGNDMVRGVSGGERKRVSIGEMLVGPASILFWD 285 (1391)
T ss_pred EeehhhHHHhccCCccccccccHHHHHHHHHHHHHHHhCchhhccceecccccccccCcccceeeeeeeeecCcceeeee
Confidence 9999999999986621 1 356899999999999999999999999999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHHHhCCCCC
Q 045902 1048 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGRQSHKLVEYFEAVPGVP 1126 (1472)
Q Consensus 1048 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~~~~~~~~~f~~~~~~~ 1126 (1472)
|+|+|||+.++.++.+.||++++. +.|+++++|||+.++++.||+|++|.+ |+++|+||. .++.+||+++ |.
T Consensus 286 e~t~GLDSsTal~iik~lr~~a~~~~~t~~vsi~Q~s~~~~~lFD~v~lL~e-G~~iy~Gp~----d~~~~yFe~~-Gf- 358 (1391)
T KOG0065|consen 286 EITRGLDSSTAFQIIKALRQLAHITGATALVSILQPSPEIYDLFDDVILLSE-GYQIYQGPR----DEVLPYFEDM-GF- 358 (1391)
T ss_pred cccccccHHHHHHHHHHHHHHHhhhcceEEEEeccCChHHHHhhhheeeeec-cceEEeccH----HHHHHHHHhc-Cc-
Confidence 999999999999999999999865 899999999999999999999999986 799999997 4789999998 55
Q ss_pred CCCCCCCCcceEEEecchhhhhh-----------h-chhHHHHHhhcHHHHHHHHHHHhhcCCCCCCCCCcccccccchh
Q 045902 1127 KIRDGYNPATWVLEVSSNAVETQ-----------L-NVDFAAIYADSDLYRRNQQLIKELSSPAPGSKDLYFTTKYSQDF 1194 (1472)
Q Consensus 1127 ~~~~~~npa~~~l~~~~~~~~~~-----------~-~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1194 (1472)
.||+..++|||+.++++...+.+ . ..++++.|.+|+.+++....++.........+.....++|..|+
T Consensus 359 ~cP~r~~~ADfLt~vts~k~~~~~~~~~~~~~~~~~~~ef~~~~~~s~~~~~l~~~l~~~~~~~k~~~~al~s~~y~v~~ 438 (1391)
T KOG0065|consen 359 KCPPRKGTADFLTEVTSKKDQEQYWNKRSKPYPYTSVSEFAEYFLNSEDYAKLKKELSKPYDKSKKHKAALVSSKYSVPY 438 (1391)
T ss_pred cCCCccCHHHHHHHhhcCccccccccccCCCcccCCHHHHHHHHhcchhhHHHHHHhcchhhhhhccchhhcCCceeccH
Confidence 68999999999999988322111 1 15789999999998876554433222222233344456899999
Q ss_pred HHHHHHHHHHHHHHHhcChhHHHHHHHHHHHHHHHHHHHhcCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhhhHhHhHH
Q 045902 1195 ITQCKTCFWKQHWSYWRNPKYNAIRFFLTTVIGALFGMIFWDKGEKTSKEQDLINLLGAMYSAVLFLGASNASSVTSVVA 1274 (1472)
Q Consensus 1195 ~~Q~~~l~~R~~~~~~R~~~~~~~r~~~~~~~~l~~G~~f~~~~~~~~~~~~~~~~~g~lf~~~~~~~~~~~~~v~~~~~ 1274 (1472)
|.|+++|+.|.++.+.||..|...++++.+++|+++|++|++... .+..+.+.+.|++|+++++..++.+.++. ...
T Consensus 439 ~~qvk~c~~R~f~l~k~n~~~~~~~~~~~~i~ali~gslF~~~~~--~t~~~~~~~~~~lffsll~~~f~~laEi~-~~~ 515 (1391)
T KOG0065|consen 439 WEQVKACTIREFLLMKRNYFYYVFKTVQLVIQALITGSLFYRTPM--STTSGGYSRGGALFFALLFNLFNGLAEIA-LTF 515 (1391)
T ss_pred HHHHHHHHHHHHHHHhCCceEEEhHHHHHHHHHHHHhhheeeccC--cccccchhhhhHHHHHHHHHHHHhHHHHH-HHH
Confidence 999999999999999999999999999999999999999999983 56778999999999999999998887764 455
Q ss_pred HhhhHHHHHhcCCCCChHHHHHHHHHHHHHHHHHHHHHHHhhhhhccCccccHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q 045902 1275 IERTVFYRERAAGMYSSLTYAFAQVSIEAIYVSIQTIVYSLLLYSMIGFHWEVTKFLWFYFFMLMCFMYFTLYGMMLVAL 1354 (1472)
Q Consensus 1275 ~er~v~~RE~~~~~Y~~~~y~~a~~l~e~P~~~~~~~~~~~i~Y~~~g~~~~~~~f~~~~~~~~~~~~~~~~~g~~~~~~ 1354 (1472)
..|+||+|||...+|++++|.++..+.++|..++.+++|.+|+||++||.+++++||.|+++++++..+++++.++++++
T Consensus 516 ~~~pv~~Khr~~~fY~p~A~al~s~l~~~P~~~i~~~vf~iI~Yfl~gl~~~A~rFF~~fL~lf~~~~~~s~lFr~ia~l 595 (1391)
T KOG0065|consen 516 QRLPVFYKHRDLSFYPPWAEALASTLLKIPSSFIESVVFVIITYFLIGLKRNAGRFFIQFLFLFLCQFCMSGLFRFIASL 595 (1391)
T ss_pred hhcchHHHhhcccccChHHHHHHHHHHhCcHHHHHHHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 78999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCCHHHHHHHHHHHHHHHHHhcccccCCCCccchhhhhhhhCHHHHHHHHHHHHhhCCccceee--ccC-----------
Q 045902 1355 TPNQQIATILMSFFLSFWNLFSGFMVPRTQIPIWWRWYYWASPVAWTIYGLVTSQIGDKVSEVE--VAG----------- 1421 (1472)
Q Consensus 1355 ~p~~~~A~~~~~~~~~~~~lf~Gf~i~~~~ip~~~~W~~~~sp~~y~~~~l~~~~~~~~~~~~~--~~~----------- 1421 (1472)
+++...|+.++++.+.+..+++||+||.++||+||+|++|+||+.|++++++.|||++.+.+|. .|+
T Consensus 596 ~~t~~~An~~g~~~~L~i~m~~Gf~Ip~~~m~~W~~Wi~yinPl~Y~fesl~~NEF~~~~~~c~p~gp~y~n~~~~~~~c 675 (1391)
T KOG0065|consen 596 SRTLSIANLIGGILLLVLFMYGGFVIPKKDMPPWFRWIAYINPLMYAFESLMSNEFHGRRWPCSPSGPAYDNISIENKVC 675 (1391)
T ss_pred cchHHHHhhHhHHHHHHHHHHcceeeeccccchHHHHHHHHCHHHHHHHHHHHhhhhcccCCCCCCCCcccccccccccc
Confidence 9999999999999999999999999999999999999999999999999999999999876653 111
Q ss_pred --------CCcccHHHHHHhhcCCccCchhHHHHHHHHHHHHHHHHHHHHHHhcccc
Q 045902 1422 --------ESGITVKEYLYKHYGYDYDFLGAVAAAHIGFVVLFFFVFVYGIKFLNFQ 1470 (1472)
Q Consensus 1422 --------~~~~~~~~~l~~~~g~~~~~~~~~~~il~~~~~~f~~~~~~~~~~~~~~ 1470 (1472)
...+.+.+|++..|+|++.|+|++++|++||.++|.+++.+++.|+|.-
T Consensus 676 ~~~~~~~G~~~v~g~~~l~~~~~y~~~~~Wr~~gillgf~v~f~~~~~ia~~yl~p~ 732 (1391)
T KOG0065|consen 676 AATGATLGNDYVSGRDYLKVQYQYEYKWYWRNFGILLGFTVFFNFVFLIALEYLKPL 732 (1391)
T ss_pred hhhccccCceEEecccccccccccccceeEeehhHHHHHHHHHHHHHHHHHHhcCcc
Confidence 1123467899999999999999999999999999999999999999853
No 13
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=4e-72 Score=709.25 Aligned_cols=776 Identities=22% Similarity=0.288 Sum_probs=422.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 261 (1472)
+..||+|+|+.|++|+.++|+|||||||||++++|.++++|+ +|+|.+||+++.++.. +..+|.|+|+|.+| .
T Consensus 365 dv~Il~g~sl~i~~G~~valVG~SGsGKST~i~LL~RfydP~---~G~V~idG~di~~~~~~~lr~~iglV~QePvlF-~ 440 (1228)
T KOG0055|consen 365 DVKILKGVSLKIPSGQTVALVGPSGSGKSTLIQLLARFYDPT---SGEVLIDGEDIRNLNLKWLRSQIGLVSQEPVLF-A 440 (1228)
T ss_pred cchhhCCeEEEeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CceEEEcCccchhcchHHHHhhcCeeeechhhh-c
Confidence 567999999999999999999999999999999999999998 9999999999988764 46899999999877 4
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
.||+||+.|+-.- .+ .+++.++.|++.++ +. +..|++..||.||+ .
T Consensus 441 ~tI~eNI~~G~~d------------at----------~~~i~~a~k~ana~--------~f---i~~lp~g~~T~vge-~ 486 (1228)
T KOG0055|consen 441 TTIRENIRYGKPD------------AT----------REEIEEAAKAANAH--------DF---ILKLPDGYDTLVGE-R 486 (1228)
T ss_pred ccHHHHHhcCCCc------------cc----------HHHHHHHHHHccHH--------HH---HHhhHHhhcccccC-C
Confidence 6999999886311 00 11222333332221 22 33467778999995 4
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
+-.|||||||||+|||||+.+|+|||||||||+||+.++..+.+.|++..+ |+|.|+..|.. .+.+.+|+|++|++
T Consensus 487 g~qLSGGQKQRIAIARalv~~P~ILLLDEaTSaLD~~se~~Vq~ALd~~~~--grTTivVaHRL--StIrnaD~I~v~~~ 562 (1228)
T KOG0055|consen 487 GVQLSGGQKQRIAIARALVRNPKILLLDEATSALDAESERVVQEALDKASK--GRTTIVVAHRL--STIRNADKIAVMEE 562 (1228)
T ss_pred CCCCChHHHHHHHHHHHHHhCCCEEEecCcccccCHHHHHHHHHHHHHhhc--CCeEEEEeeeh--hhhhccCEEEEEEC
Confidence 455999999999999999999999999999999999999999999998864 56777766654 45666999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHH--HHhhCcccchhhhcccCCCCcCCChhHHHHHHHhch----hhhhh
Q 045902 422 GEIVYQGPREYVLDFFESVGFRCPERKGAADFL--QEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFH----VGQKL 495 (1472)
Q Consensus 422 G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl--~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~----~~~~l 495 (1472)
|+||+.|+++|++.. .|. -++.. |+....++..+ .... ..++.....+.+. ..+..
T Consensus 563 G~IvE~G~h~ELi~~---~G~-------Y~~lv~~Q~~~~~~~~~~----~~~~----~~~~~~~s~~~s~~~~~~~~~~ 624 (1228)
T KOG0055|consen 563 GKIVEQGTHDELIAL---GGI-------YSSLVRLQELEKAAEDEE----EEES----LKEERSRSLKSSSSSPSLSRGS 624 (1228)
T ss_pred CEEEEecCHHHHHhc---cch-------HHHHHHHHhhhhhhhccc----cccc----hhhhhhhccccccccccccCCc
Confidence 999999999999862 010 11111 22222111000 0000 0000000000000 00000
Q ss_pred -hhhh--cCCCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccC-Cccc
Q 045902 496 -TDEL--RVPYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQM-TYGQ 571 (1472)
Q Consensus 496 -~~~~--~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~-~~~~ 571 (1472)
.... ..+.+.....+ ........++|+.++.+. .+|..+.-.....+.+.....+.+++++.++--... +.+.
T Consensus 625 ~~~~~~~~~~~~e~~~~~--~~~~~~~~s~~~i~k~~~-pe~~~l~lG~i~a~i~G~~~P~fa~~~s~~~~~f~~~~~~~ 701 (1228)
T KOG0055|consen 625 NRSNLLSVKPEGEDPEEP--VSEEDEKVSFWRIFKLNK-PEWPYLLLGSLGAAIRGATYPLFAYVFSQVLEAFYPPDDDE 701 (1228)
T ss_pred cccccccccccccccccc--cccccccccHHHHHHhcc-chhHHHHHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCChHH
Confidence 0000 00000000000 001112334554444332 233333322222333344445555555544321111 1111
Q ss_pred cccccchhhHHHHHHH----------HHHHHHHHHHHHHhhhhHHHHH--hhcCCCcchhhHHHHHHHHHhhHHHHHHHH
Q 045902 572 LIDGGKFYGALFFSLV----------NVMFNGMAELALTIVRLPAFYK--QRDFLFFPAWAFALPIWVLRIPLSLMESSI 639 (1472)
Q Consensus 572 ~~~~~~~~g~lff~l~----------~~~~~~~~~~~~~~~~~~vf~k--qr~~~~y~~~ay~la~~i~~iP~~~~~~~i 639 (1472)
.......+..+|..+. ..+|.-+.|....-.|...|.+ ..+..||.----. +....++---
T Consensus 702 ~~~~~~~~al~f~~l~~~~~i~~~~q~~~f~~~ge~Lt~R~R~~~F~~ll~qd~~wFD~~~ns-g~l~~RLa~D------ 774 (1228)
T KOG0055|consen 702 LKREVRAWALIFLGLGIVSGITNFLQHYFFGIAGEKLTKRLRSMMFRALLRQEVGWFDDPENS-GALSSRLATD------ 774 (1228)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCcccCCCccc-hHHHHHHhcc------
Confidence 1111112333333221 2233444454444455555554 2334444322111 1111111100
Q ss_pred HHhhhhhccCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHH
Q 045902 640 WILLTYYTIGFAPSATRFFRQLLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWG 719 (1472)
Q Consensus 640 ~~~i~Y~~~gl~~~~~~ff~~~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~ 719 (1472)
.++.....-..+..+..+.+.......+ ++.-...+| +..+++.+++.++++... .++
T Consensus 775 -----------a~~vr~~v~~rl~~vv~~~~~~~~~iii-af~~~W~la--lv~la~~Pll~~~~~~~~--------~~~ 832 (1228)
T KOG0055|consen 775 -----------ASNVRAAVGDRLSLVVQNIAAVIIGIII-AFIYGWRLA--LVVLATFPLLILSGYLQK--------KFL 832 (1228)
T ss_pred -----------hHHHHHHHHHHHHHHHHHHHHHHHHHHH-HHHHHHHHH--HHHHHHHHHHHHHHHHHH--------HHH
Confidence 0000000001111111111111000000 000011111 111122222222222110 011
Q ss_pred HhhcH---HHHHHHHHHHHhhcCCCCCCCCCCCcccCCcchHHHHHhhcC-----C--cccchhHHHHHHHHHHHHHHH-
Q 045902 720 YYVSP---MSYGQNAIVLNEFLDERWSAPNPARFLVDEPTVGKALLKARG-----M--YTEDHMFWICIVALLGFSLFF- 788 (1472)
Q Consensus 720 ~~isp---l~Y~~~al~~nef~~~~~~~~~~~~~~~~~~~~G~~~L~~~~-----~--~~~~~~~w~~i~~l~g~~v~f- 788 (1472)
.-.+. -.|.-.+.+.+|-...--.. ........+.+.+. . .......|.+++.-+...+.|
T Consensus 833 ~~~~~~~~~~~~ea~~iA~eai~NIrTV--------~al~~e~~~~~~y~~~l~~p~~~~~~~~~i~gl~f~~sqs~~~~ 904 (1228)
T KOG0055|consen 833 KGFSKDDKKAYEEASKIAIEAVSNIRTV--------AALCAEEKFMELYKEELEKPRKSSFKRGLISGLGFGFSQSLLFF 904 (1228)
T ss_pred hhhhHHHHHHHHHHHHHHHHHHHhHHHH--------HHHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 00000 01111122222211100000 00000000110000 0 000112344433333322222
Q ss_pred --HHHHHHHHHhcCCCcCcccccccccCCC------------Ccc--cccC---hhhhhhhcccCCCCCCCCCccccccc
Q 045902 789 --NLCFIAALTYLDPFKETKSVMMEHNDGG------------KSK--KQSN---SHAQQNMRAADMSPPSTAPLFEGIDM 849 (1472)
Q Consensus 789 --~i~~~~aL~~~~~~~~~~~~~~~~~~~~------------~~~--~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~ 849 (1472)
.+.++.+...+.. .....++.... ... .... ......+...-...|.
T Consensus 905 ~~A~~f~~G~~Li~~----g~~~~~~~~~vf~~l~~ta~~~~~~~s~~Pd~~ka~~Aa~~iF~i~dr~~~---------- 970 (1228)
T KOG0055|consen 905 VYALSFWYGARLISN----GEMTFEDVFRVFMALSFTAMALGQASSYAPDISKAKIAAGSIFEILDRKPT---------- 970 (1228)
T ss_pred HHHHHHHHhHHHHhc----CCcCHHHHHHHHHHHHHHHHHHHHHHhhCcHHHHHHHHHHHHHHHhcCCCC----------
Confidence 1222222222211 00000000000 000 0000 0000000000000000
Q ss_pred ccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCCh
Q 045902 850 AVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGK 929 (1472)
Q Consensus 850 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGK 929 (1472)
+.... ..+...+.....+.|+|+++.++.. ++.++|+|+|++|++|+.+||+|||||||
T Consensus 971 ----------i~~~~-~~~~~~~~~~G~I~~~~V~F~YPsR----------P~~~Il~~l~l~i~~GqTvALVG~SGsGK 1029 (1228)
T KOG0055|consen 971 ----------IDPDS-TSGGKLPNVKGDIEFRNVSFAYPTR----------PDVPVLNNLSLSIRAGQTVALVGPSGSGK 1029 (1228)
T ss_pred ----------CCCCC-CCCCccccceeEEEEeeeEeeCCCC----------CCchhhcCCcEEecCCCEEEEECCCCCCH
Confidence 00110 1222333344579999999998753 35689999999999999999999999999
Q ss_pred hHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcc
Q 045902 930 TTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVE 1006 (1472)
Q Consensus 930 TTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~ 1006 (1472)
||.+.+|-+.+. +..|.|.+||.+++. ...|+.+|.|.|+|.+|. -|++||+.|+ ..+ -. .+|+++.+.
T Consensus 1030 STvI~LLeRfYd--p~~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF~-~TIrENI~YG-~~~-vs---~~eIi~Aak 1101 (1228)
T KOG0055|consen 1030 STVISLLERFYD--PDAGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLFN-GTIRENIAYG-SEE-VS---EEEIIEAAK 1101 (1228)
T ss_pred HHHHHHHHHhcC--CCCCeEEECCcccccCCHHHHHHhcceeccCchhhc-ccHHHHHhcc-CCC-CC---HHHHHHHHH
Confidence 999999998776 569999999998754 567789999999999985 5999999998 222 22 344444444
Q ss_pred cccc----------cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEE
Q 045902 1007 MKAL----------RNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVV 1076 (1472)
Q Consensus 1007 l~~~----------~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi 1076 (1472)
+.+. .|+.+|..|. +||||||||++||||+++||+||+|||.||+||+++.+.|+++|.+.. .|||.|
T Consensus 1102 ~ANaH~FI~sLP~GyDT~vGerG~-QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~-~gRT~I 1179 (1228)
T KOG0055|consen 1102 LANAHNFISSLPQGYDTRVGERGV-QLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM-EGRTTI 1179 (1228)
T ss_pred HhhhHHHHhcCcCcccCccCcccC-cCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh-cCCcEE
Confidence 4333 4666776554 799999999999999999999999999999999999999999999874 589999
Q ss_pred EEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1077 CTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1077 ~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+++|+++ ..+.+|.|.|+++ |+|++.|+-
T Consensus 1180 vIAHRLS--TIqnaD~I~Vi~~-G~VvE~GtH 1208 (1228)
T KOG0055|consen 1180 VIAHRLS--TIQNADVIAVLKN-GKVVEQGTH 1208 (1228)
T ss_pred EEecchh--hhhcCCEEEEEEC-CEEEecccH
Confidence 9999976 6788999999985 899999974
No 14
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=2.2e-68 Score=719.49 Aligned_cols=212 Identities=26% Similarity=0.414 Sum_probs=181.7
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|++..+. .+++.+|+|||+.|++||++||+||||||||||+++|+|..++ .+|+|.++|+++
T Consensus 1937 ~L~v~nLsK~Y~-----------~~~~~aL~~ISf~I~~GEi~gLLG~NGAGKTTLlkmL~Gll~p--tsG~I~i~G~~i 2003 (2272)
T TIGR01257 1937 ILRLNELTKVYS-----------GTSSPAVDRLCVGVRPGECFGLLGVNGAGKTTTFKMLTGDTTV--TSGDATVAGKSI 2003 (2272)
T ss_pred eEEEEEEEEEEC-----------CCCceEEEeeEEEEcCCcEEEEECCCCCcHHHHHHHHhCCCCC--CccEEEECCEEC
Confidence 467788766542 1125799999999999999999999999999999999998774 589999999886
Q ss_pred Ch--hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHH
Q 045902 957 KQ--ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKR 1030 (1472)
Q Consensus 957 ~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqR 1030 (1472)
.. ...++.+|||+|++.+++.+||+|++.+.+.++. +.+ +.++++++.+++.+.+|+.++ .||||||||
T Consensus 2004 ~~~~~~~r~~IGy~pQ~~~L~~~LTv~E~L~l~a~l~g~~~~~~~~~v~~lLe~lgL~~~~dk~~~-----~LSGGqKqR 2078 (2272)
T TIGR01257 2004 LTNISDVHQNMGYCPQFDAIDDLLTGREHLYLYARLRGVPAEEIEKVANWSIQSLGLSLYADRLAG-----TYSGGNKRK 2078 (2272)
T ss_pred cchHHHHhhhEEEEeccccCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHhcCChh-----hCCHHHHHH
Confidence 42 2345679999999999999999999998776653 222 345678899999888777654 799999999
Q ss_pred HHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1031 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1031 l~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+||+||+.+|+||||||||+|||+.+++.+++.|++++++|+|||+|||+++ ++...|||+++|.+ |+++..|+.
T Consensus 2079 LslA~ALi~~P~VLLLDEPTsGLDp~sr~~l~~lL~~l~~~g~TIILtTH~me-e~e~lcDrV~IL~~-G~i~~~Gs~ 2154 (2272)
T TIGR01257 2079 LSTAIALIGCPPLVLLDEPTTGMDPQARRMLWNTIVSIIREGRAVVLTSHSME-ECEALCTRLAIMVK-GAFQCLGTI 2154 (2272)
T ss_pred HHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999999999999999999999999878999999999976 57778999999985 799999986
No 15
>KOG0054 consensus Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=8.6e-66 Score=667.84 Aligned_cols=761 Identities=22% Similarity=0.284 Sum_probs=409.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVR 265 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 265 (1472)
.+.|+|+|+.|++|+++||+||.|||||+||.+|.|.++.. +|+|.++|. ++||+|+++++. .|||
T Consensus 534 ~~tL~dIn~~i~~G~lvaVvG~vGsGKSSLL~AiLGEm~~~---sG~v~v~gs----------iaYv~Q~pWI~n-gTvr 599 (1381)
T KOG0054|consen 534 EPTLKDINFEIKKGQLVAVVGPVGSGKSSLLSAILGEMPKL---SGSVAVNGS----------VAYVPQQPWIQN-GTVR 599 (1381)
T ss_pred cccccceeEEecCCCEEEEECCCCCCHHHHHHHHhcCcccc---cceEEEcCe----------EEEeccccHhhC-CcHH
Confidence 34899999999999999999999999999999999999875 999999883 899999999995 6999
Q ss_pred HHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCC
Q 045902 266 ETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGI 345 (1472)
Q Consensus 266 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 345 (1472)
|||.|+.... ..||+...+.|..++|..+ |+.+-.|.|| |++.+|
T Consensus 600 eNILFG~~~d--~~rY~~Vi~aC~L~~Dle~--------------------------------Lp~GD~TeIG-ErGinL 644 (1381)
T KOG0054|consen 600 ENILFGSPYD--EERYDKVIKACALKKDLEI--------------------------------LPFGDLTEIG-ERGINL 644 (1381)
T ss_pred HhhhcCcccc--HHHHHHHHHHccCHhHHhh--------------------------------cCCCCcceec-CCccCC
Confidence 9999986542 3455555555555444333 3344578888 677889
Q ss_pred ChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEE
Q 045902 346 SGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIV 425 (1472)
Q Consensus 346 SGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv 425 (1472)
||||||||++|||++++++|++||+|.|++|+++..+|++..-. ....++|+|+++||- +....+|.|++|++|+|+
T Consensus 645 SGGQKqRIsLARAVY~~adIYLLDDplSAVDahvg~~if~~ci~-~~L~~KT~ILVTHql--~~L~~ad~Iivl~~G~I~ 721 (1381)
T KOG0054|consen 645 SGGQKQRISLARAVYQDADIYLLDDPLSAVDAHVGKHIFEECIR-GLLRGKTVILVTHQL--QFLPHADQIIVLKDGKIV 721 (1381)
T ss_pred cHhHHHHHHHHHHHhccCCEEEEcCcchhhhHhhhHHHHHHHHH-hhhcCCEEEEEeCch--hhhhhCCEEEEecCCeEe
Confidence 99999999999999999999999999999999999999864432 234679999998864 677899999999999999
Q ss_pred EecChhHHHH---HHHhcCCCCCCCCChHHHHHHhhCcccchhhh-cccCCCCcCCChhHHHHHHHhchhhhhhhhhhcC
Q 045902 426 YQGPREYVLD---FFESVGFRCPERKGAADFLQEVTSRKDQQQYW-CKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELRV 501 (1472)
Q Consensus 426 ~~G~~~~~~~---~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~-~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~~ 501 (1472)
..|+++|+.+ +|+.+ ....+.++.. ...+.+....+..+. +. +.........+. .
T Consensus 722 ~~Gty~el~~~~~~~~~l-----------------~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~~~--~ 780 (1381)
T KOG0054|consen 722 ESGTYEELLKSGGDFAEL-----------------AHEEESEQEEEASEKDLESGESSRES-ES-RSLESLSSEEEK--S 780 (1381)
T ss_pred cccCHHHHHhcchhHHHH-----------------hhccchhhccccccccccccccccch-hh-hhhhhhcccccc--c
Confidence 9999999973 23222 1100000000 000000000000000 00 000000000000 0
Q ss_pred CCCCCC-CCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHH--HHHHHHH-HHHHhhheeeeccCCccccccccc
Q 045902 502 PYDKSK-THPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVF--KTFQITI-MSIIAFTVYLRTQMTYGQLIDGGK 577 (1472)
Q Consensus 502 ~~~~~~-~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~--~~~~~~i-~ali~g~lf~~~~~~~~~~~~~~~ 577 (1472)
...+.+ .........+.+.-.|..++..++- . ..+.... -+.+... +..+.+..|+....+.+.......
T Consensus 781 ~~~~~~~~~~~~~ee~~~G~v~~~vY~~Y~~a-----~-~g~~~~~~~~~~~v~~~~~~~~~~~WLs~W~~~~~~~~~~~ 854 (1381)
T KOG0054|consen 781 KDEKEEEDKLVQEEERETGKVSWSVYKKYIKA-----A-GGFLLVLLILLLFVLTQVLQIASNYWLSYWTDDGEDNGTTT 854 (1381)
T ss_pred ccccchhhHHHHHHHHhcCEeeHHHHHHHHHh-----c-ccHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccC
Confidence 000000 0000000001222233333322221 0 1111111 1111111 112222233332222211000000
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHH
Q 045902 578 FYGALFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRF 657 (1472)
Q Consensus 578 ~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~f 657 (1472)
....++..++.++ ++........+ ++.+...-.+..-.+.... ..+.
T Consensus 855 -~~~~~~~~vY~~l-~~~~~~~~~~r----------------s~~~~~~~l~aS~~Lh~~m---------------l~~I 901 (1381)
T KOG0054|consen 855 -VSTSFYLGVYALL-GVASSLLTLLR----------------SFLFAKGGLKASRKLHDKL---------------LNSI 901 (1381)
T ss_pred -CCcchHHHHHHHH-HHHHHHHHHHH----------------HHHHHHHHHHHHHHHHHHH---------------HHHH
Confidence 0111111111111 00000000000 0000000011111111111 1233
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHH-------HHhhcHHHHHHH
Q 045902 658 FRQLLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIW-------GYYVSPMSYGQN 730 (1472)
Q Consensus 658 f~~~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W-------~~~ispl~Y~~~ 730 (1472)
++..+.+|.++..|..++||..++...+..-......++..++.+.|.++......||+.+ ++|.--..|--.
T Consensus 902 lrapm~FFdtTP~GRILNRFSkD~~~vD~~Lp~~~~~~~~~~~~~l~~~~vi~~~~P~fli~~~pl~v~~~~~~~~Y~~t 981 (1381)
T KOG0054|consen 902 LRAPMSFFDTTPTGRILNRFSKDIDTVDVLLPFTLEFFLQSLLNVLGILVVISYVTPWFLIAIIPLGVIYYFVQRYYLAT 981 (1381)
T ss_pred HhCcchhcCCCCccchhhhcccchHHHHHhhHHHHHHHHHHHHHHHHHHHHhhHHhHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4455567788888899999988887655433333333333333333333333333334322 222222222221
Q ss_pred HHHHHhhcCCCCCCCCCCCcccCCcchHHHHHhhcCC--------------cccch------hHHHHHHH-HHHHHHHHH
Q 045902 731 AIVLNEFLDERWSAPNPARFLVDEPTVGKALLKARGM--------------YTEDH------MFWICIVA-LLGFSLFFN 789 (1472)
Q Consensus 731 al~~nef~~~~~~~~~~~~~~~~~~~~G~~~L~~~~~--------------~~~~~------~~w~~i~~-l~g~~v~f~ 789 (1472)
+--+....+..-+ +.... ...+..|...+++++- +...+ ..|.++-. ++|-.+++.
T Consensus 982 sReLkRLesitRS-Pi~sh--~~Etl~GlsTIRAf~~~~rf~~~~~~~~D~~~~~~f~~~~a~RWla~Rle~ig~~~v~~ 1058 (1381)
T KOG0054|consen 982 SRELKRLESITRS-PIYSH--FSETLQGLSTIRAFGKEERFIQENDELIDENSRAFFLSISANRWLAVRLELLGNLVVLI 1058 (1381)
T ss_pred hHHHHHhhhcccc-hHHHh--HHHHhcCcceeeeccccHHHHHHHHHHhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111111111000 00000 0112223223322221 11111 12443311 122222222
Q ss_pred HHHHHHHHhcCCCcCccc--cccc-----cc-------CCCCccccc-ChhhhhhhcccCCCCCCCCCcccccccccccC
Q 045902 790 LCFIAALTYLDPFKETKS--VMME-----HN-------DGGKSKKQS-NSHAQQNMRAADMSPPSTAPLFEGIDMAVMNT 854 (1472)
Q Consensus 790 i~~~~aL~~~~~~~~~~~--~~~~-----~~-------~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 854 (1472)
.+....+..-........ .++. .. ..+.+.+.. -++..+-. ..++..|. . .+.
T Consensus 1059 ~al~~vl~~~~~~~~g~vGLslsyal~lt~~l~~~vR~~~elEn~m~SVERv~eY~-----~~~~E~p~-~-~~~----- 1126 (1381)
T KOG0054|consen 1059 AALFAVLLPSGLISPGLVGLSLSYALQLTGLLQWLVRQSSELENNMVSVERVLEYT-----DIPSEAPL-E-IEE----- 1126 (1381)
T ss_pred HHHHHHHccCCCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHHhcchhhhHHHHHh-----cCCCCCCC-C-CcC-----
Confidence 221111111110000000 0000 00 000000000 00000000 00000000 0 000
Q ss_pred CCCCccccccCCCCccccccceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHh
Q 045902 855 PDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMD 934 (1472)
Q Consensus 855 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~ 934 (1472)
.. .....+ ....+.|+|++..+. ++-..+|||||++|+|||++||+|++|||||||.+
T Consensus 1127 --~~-pp~~WP--------~~G~I~f~~~~~RYr-----------p~lp~VLk~is~~I~p~eKVGIVGRTGaGKSSL~~ 1184 (1381)
T KOG0054|consen 1127 --SR-PPPSWP--------SKGEIEFEDLSLRYR-----------PNLPLVLKGISFTIKPGEKVGIVGRTGAGKSSLIL 1184 (1381)
T ss_pred --CC-CCCCCC--------CCCeEEEEEeEEEeC-----------CCCcchhcCceEEEcCCceEEEeCCCCCCHHHHHH
Confidence 00 001111 223678898876653 23357999999999999999999999999999999
Q ss_pred hhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc
Q 045902 935 VLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR 1011 (1472)
Q Consensus 935 ~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~ 1011 (1472)
+|.+... +.+|+|.|||.++.+ ...|++++.+||||.+|.. |+|.||.-.. +-..+++.+.|+..+++
T Consensus 1185 aLFRl~e--~~~G~I~IDgvdI~~igL~dLRsrlsIIPQdPvLFsG-TvR~NLDPf~------e~sD~~IW~ALe~~~Lk 1255 (1381)
T KOG0054|consen 1185 ALFRLVE--PAEGEILIDGVDISKIGLHDLRSRLSIIPQDPVLFSG-TVRFNLDPFD------EYSDDEIWEALERCQLK 1255 (1381)
T ss_pred HHHHhcC--ccCCeEEEcCeecccccHHHHHhcCeeeCCCCceecC-ccccccCccc------ccCHHHHHHHHHHhChH
Confidence 9999876 458999999998754 5678899999999999865 9999985211 11123444444444444
Q ss_pred ccccCC---------CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCc
Q 045902 1012 NSLVGL---------PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQP 1082 (1472)
Q Consensus 1012 ~~~~~~---------~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~ 1082 (1472)
+..... +++.++|.||||.+|+||||+++++||+|||+|+++|+++...|+++||+-.+ ++|||++.|+.
T Consensus 1256 ~~v~~~p~~Ld~~v~egG~N~SvGQRQLlCLARALLr~skILvLDEATAsVD~~TD~lIQ~tIR~~F~-dcTVltIAHRl 1334 (1381)
T KOG0054|consen 1256 DVVSSLPGGLDSEVSEGGENFSVGQRQLLCLARALLRKSKILVLDEATASVDPETDALIQKTIREEFK-DCTVLTIAHRL 1334 (1381)
T ss_pred HHHhhCCcCCCceecCCCccCChHHHHHHHHHHHHhccCCEEEEecccccCChHHHHHHHHHHHHHhc-CCeEEEEeecc
Confidence 433222 24578999999999999999999999999999999999999999999999764 79999999997
Q ss_pred cHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1083 SIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1083 ~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+ ..-.+|||+||++ |+++++|.+
T Consensus 1335 ~--TVmd~DrVlVld~-G~v~EfdsP 1357 (1381)
T KOG0054|consen 1335 N--TVMDSDRVLVLDA-GRVVEFDSP 1357 (1381)
T ss_pred c--hhhhcCeEEEeeC-CeEeecCCh
Confidence 6 4556799999986 789888876
No 16
>COG1123 ATPase components of various ABC-type transport systems, contain duplicated ATPase [General function prediction only]
Probab=100.00 E-value=3.4e-64 Score=600.90 Aligned_cols=470 Identities=27% Similarity=0.329 Sum_probs=349.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-CCceeEEEEcCeeCCCCCC-------CceEEEEcCCC-
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS-LRVSGRVTYCGHELTEFVP-------QRTCAYISQHD- 256 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~-~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 256 (1472)
..+++||||.+.|||+++|+|.|||||||+.++|.|.+++. ...+|+|.++|.++..... .+.++||+|++
T Consensus 22 ~~~v~~vsf~v~~GE~lgIvGESGsGKSt~a~~i~gll~~~~~~~~G~I~~~g~dl~~l~~~~~r~~rg~~Ia~i~Q~p~ 101 (539)
T COG1123 22 VPAVRDVSFEVEPGEILGIVGESGSGKSTLALALMGLLPEGGRITSGEVILDGRDLLGLSEREMRKLRGKRIAMIFQDPM 101 (539)
T ss_pred eeeeecceEEecCCcEEEEEcCCCCCHHHHHHHHhccCCCCCcccceEEEECCcchhcCCHHHHHHhccccEEEEecCch
Confidence 57999999999999999999999999999999999999876 4568999999997765543 25799999996
Q ss_pred -CCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccc
Q 045902 257 -LHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADI 335 (1472)
Q Consensus 257 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 335 (1472)
.+.|-+||.+.+.-..+..+...+ .+. ...+.++|+..||++....
T Consensus 102 ~slnP~~tIg~Qi~E~~~~h~~~~~---------~ea------------------------~~~a~elL~~Vgl~~~~~~ 148 (539)
T COG1123 102 TSLNPVMTIGDQIREALRLHGKGSR---------AEA------------------------RKRAVELLEQVGLPDPERR 148 (539)
T ss_pred hhcCchhhHHHHHHHHHHHhccccH---------HHH------------------------HHHHHHHHHHcCCCChhhh
Confidence 556778999988765544332110 000 1123568899999987655
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
+.++..|||||||||.||+||+.+|++|++|||||+||..++.+|.+.|+++.++.|.+++++.|. ..-+.+++|+
T Consensus 149 ---~~yPheLSGG~rQRv~iAmALa~~P~LLIaDEPTTaLDvt~q~qIL~llk~l~~e~g~a~l~ITHD-l~Vva~~aDr 224 (539)
T COG1123 149 ---DRYPHQLSGGMRQRVMIAMALALKPKLLIADEPTTALDVTTQAQILDLLKDLQRELGMAVLFITHD-LGVVAELADR 224 (539)
T ss_pred ---ccCCcccCchHHHHHHHHHHHhCCCCEEEECCCccccCHHHHHHHHHHHHHHHHHcCcEEEEEcCC-HHHHHHhcCe
Confidence 568889999999999999999999999999999999999999999999999998889888887665 4577899999
Q ss_pred EEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhh
Q 045902 416 IILLSEGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKL 495 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l 495 (1472)
|+||++|++|+.|+.+++..- | ..||.. .+
T Consensus 225 v~Vm~~G~iVE~G~~~~i~~~--------p-------------------------~hpYT~-----------------~L 254 (539)
T COG1123 225 VVVMYKGEIVETGPTEEILSN--------P-------------------------QHPYTR-----------------GL 254 (539)
T ss_pred EEEEECCEEEEecCHHHHHhc--------c-------------------------CCcccH-----------------HH
Confidence 999999999999999988541 0 111100 00
Q ss_pred hhhhcCCCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccc
Q 045902 496 TDELRVPYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDG 575 (1472)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~ 575 (1472)
.+. .|... .
T Consensus 255 l~a--~p~~~-----------------------------------------------------------------~---- 263 (539)
T COG1123 255 LAA--VPRLG-----------------------------------------------------------------D---- 263 (539)
T ss_pred Hhh--CCCcc-----------------------------------------------------------------c----
Confidence 000 00000 0
Q ss_pred cchhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHH
Q 045902 576 GKFYGALFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSAT 655 (1472)
Q Consensus 576 ~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~ 655 (1472)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHH
Q 045902 656 RFFRQLLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLN 735 (1472)
Q Consensus 656 ~ff~~~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~n 735 (1472)
T Consensus 264 -------------------------------------------------------------------------------- 263 (539)
T COG1123 264 -------------------------------------------------------------------------------- 263 (539)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhcCCCCCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCC
Q 045902 736 EFLDERWSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDG 815 (1472)
Q Consensus 736 ef~~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~ 815 (1472)
..... .
T Consensus 264 ------~~~~~-~------------------------------------------------------------------- 269 (539)
T COG1123 264 ------EKIIR-L------------------------------------------------------------------- 269 (539)
T ss_pred ------ccccc-c-------------------------------------------------------------------
Confidence 00000 0
Q ss_pred CCcccccChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhc
Q 045902 816 GKSKKQSNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKS 895 (1472)
Q Consensus 816 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 895 (1472)
....+ .+ ....+.++|++-.+..+....
T Consensus 270 ------------------~~~~~--------------------------------~~-~~~ll~V~~l~k~y~~~~~~~- 297 (539)
T COG1123 270 ------------------PRRGP--------------------------------LR-AEPLLSVRNLSKRYGSRKGLF- 297 (539)
T ss_pred ------------------ccccc--------------------------------cc-cCceeEeeeeeeeeccccccc-
Confidence 00000 00 001123333332222111000
Q ss_pred cccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC--Ch---hcccceeEEecc
Q 045902 896 QGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK--KQ---ETFARISGYCEQ 970 (1472)
Q Consensus 896 ~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~--~~---~~~~~~~gyv~Q 970 (1472)
....+...+++||||++++||++||+|+||||||||.++|+|+.++ .+|.|.++|.+. .. ...++.+-+++|
T Consensus 298 -~~~~~~~~Av~~VSf~l~~GE~lglVGeSGsGKSTlar~i~gL~~P--~~G~i~~~g~~~~~~~~~~~~~r~~~QmvFQ 374 (539)
T COG1123 298 -VRERGEVKAVDDVSFDLREGETLGLVGESGSGKSTLARILAGLLPP--SSGSIIFDGQDLDLTGGELRRLRRRIQMVFQ 374 (539)
T ss_pred -cccccceeeeeeeeeEecCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCceEEEeCcccccccchhhhhhhheEEEEe
Confidence 0001235799999999999999999999999999999999999874 589999999762 11 234456677777
Q ss_pred CC--CCCCCCCHHHHHHHHHHcCCCc--h---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 045902 971 ND--IHSPNVTIYESLLYSAWLRLPK--D---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSI 1043 (1472)
Q Consensus 971 ~~--~~~~~lTv~e~l~~~~~l~~~~--~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~i 1043 (1472)
|+ .+.|.+||.+.+.-........ . +++.++++.++|.. +..... +..||||||||++|||||+.+|++
T Consensus 375 dp~~SLnPr~tV~~~i~epL~~~~~~~~~~~~~rv~~ll~~VgL~~--~~l~ry--P~elSGGQrQRvaIARALa~~P~l 450 (539)
T COG1123 375 DPYSSLNPRMTVGDILAEPLRIHGGGSGAERRARVAELLELVGLPP--EFLDRY--PHELSGGQRQRVAIARALALEPKL 450 (539)
T ss_pred CcccccCccccHHHHHHhHHhhhcccchHHHHHHHHHHHHHcCCCH--HHHhcC--chhcCcchhHHHHHHHHHhcCCCE
Confidence 76 5789999999997655433221 1 35677777777763 222223 358999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1044 IFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1044 l~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|++|||||.||+..+..|.++|+++.++ |.|.|++|||.+. +.+.|||+++|.+ |+++..||.
T Consensus 451 li~DEp~SaLDvsvqa~VlnLl~~lq~e~g~t~lfISHDl~v-V~~i~drv~vm~~-G~iVE~G~~ 514 (539)
T COG1123 451 LILDEPVSALDVSVQAQVLNLLKDLQEELGLTYLFISHDLAV-VRYIADRVAVMYD-GRIVEEGPT 514 (539)
T ss_pred EEecCCccccCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHHH-HHhhCceEEEEEC-CeEEEeCCH
Confidence 9999999999999999999999999866 9999999999763 6678999999985 899999975
No 17
>PLN03130 ABC transporter C family member; Provisional
Probab=100.00 E-value=3e-64 Score=691.37 Aligned_cols=212 Identities=22% Similarity=0.286 Sum_probs=176.0
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
..+.|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1236 g~I~f~nVsf~Y~~-----------~~~~VL~~is~~I~~GekVaIVGrSGSGKSTLl~lL~rl~~--p~~G~I~IDG~d 1302 (1622)
T PLN03130 1236 GSIKFEDVVLRYRP-----------ELPPVLHGLSFEISPSEKVGIVGRTGAGKSSMLNALFRIVE--LERGRILIDGCD 1302 (1622)
T ss_pred CcEEEEEEEEEeCC-----------CCCceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCcCC--CCCceEEECCEe
Confidence 35889999887731 12469999999999999999999999999999999999887 458999999998
Q ss_pred CCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc-------ccccCCCCCCCCCH
Q 045902 956 KKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR-------NSLVGLPGVDGLST 1025 (1472)
Q Consensus 956 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~-------~~~~~~~~~~~LSg 1025 (1472)
+.+ ..+|+.++||||++.++.. |++|||.+.. ...++.+.++++..++.+.. |+.++.. ..+|||
T Consensus 1303 I~~i~l~~LR~~IsiVpQdp~LF~G-TIreNLd~~~---~~tdeei~~Al~~a~l~~~I~~lp~GLdt~Vge~-G~nLSg 1377 (1622)
T PLN03130 1303 ISKFGLMDLRKVLGIIPQAPVLFSG-TVRFNLDPFN---EHNDADLWESLERAHLKDVIRRNSLGLDAEVSEA-GENFSV 1377 (1622)
T ss_pred cccCCHHHHHhccEEECCCCccccc-cHHHHhCcCC---CCCHHHHHHHHHHcCcHHHHHhCccccCccccCC-CCCCCH
Confidence 653 5678889999999999875 9999997642 22345566666666664332 3344432 357999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
|||||++|||||+++|+||+||||||+||+.+.+.|++.|++.. +++|||+++|+++ ....||+|++|++ |+++..
T Consensus 1378 GQrQrlaLARALLr~p~ILILDEATSaLD~~Te~~Iq~~I~~~~-~~~TvI~IAHRL~--tI~~~DrIlVLd~-G~IvE~ 1453 (1622)
T PLN03130 1378 GQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEF-KSCTMLIIAHRLN--TIIDCDRILVLDA-GRVVEF 1453 (1622)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHC-CCCEEEEEeCChH--HHHhCCEEEEEEC-CEEEEe
Confidence 99999999999999999999999999999999999999999985 4899999999965 5677999999985 799999
Q ss_pred cCCC
Q 045902 1106 GPLG 1109 (1472)
Q Consensus 1106 g~~~ 1109 (1472)
|+..
T Consensus 1454 Gt~~ 1457 (1622)
T PLN03130 1454 DTPE 1457 (1622)
T ss_pred CCHH
Confidence 9863
No 18
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=1.1e-63 Score=679.68 Aligned_cols=216 Identities=22% Similarity=0.328 Sum_probs=177.8
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC-------------
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------------- 943 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~------------- 943 (1472)
.+.|+||+|.++.. ++.++|+|+||+|+||+++||+||||||||||+++|.|..++.
T Consensus 1165 ~I~f~nVsF~Y~~~----------~~~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~ 1234 (1466)
T PTZ00265 1165 KIEIMDVNFRYISR----------PNVPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTN 1234 (1466)
T ss_pred eEEEEEEEEECCCC----------CCCccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccc
Confidence 58899999887421 1246999999999999999999999999999999999987641
Q ss_pred ---------------------------------------eeEEEEEEcCccCC---hhcccceeEEeccCCCCCCCCCHH
Q 045902 944 ---------------------------------------YIEGSISISGYPKK---QETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 944 ---------------------------------------~~~G~i~i~G~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
+.+|+|.+||.++. ...+++.+|||+|++.+| ..|++
T Consensus 1235 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIr 1313 (1466)
T PTZ00265 1235 DMTNEQDYQGDEEQNVGMKNVNEFSLTKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIY 1313 (1466)
T ss_pred ccccccccccccccccccccccccccccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHH
Confidence 14899999999864 356788999999999988 57999
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHcccccc-------cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 045902 982 ESLLYSAWLRLPKDMFVEEVMELVEMKAL-------RNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1054 (1472)
Q Consensus 982 e~l~~~~~l~~~~~~~~~~v~~~l~l~~~-------~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD 1054 (1472)
|||.|+.. ...++.++++++..++.++ .|+.+|..| ..||||||||++|||||+++|+||+||||||+||
T Consensus 1314 eNI~~g~~--~at~eeI~~A~k~A~l~~fI~~LP~GydT~VGe~G-~~LSGGQkQRIaIARALlr~p~ILLLDEaTSaLD 1390 (1466)
T PTZ00265 1314 ENIKFGKE--DATREDVKRACKFAAIDEFIESLPNKYDTNVGPYG-KSLSGGQKQRIAIARALLREPKILLLDEATSSLD 1390 (1466)
T ss_pred HHHhcCCC--CCCHHHHHHHHHHcCCHHHHHhCccccCCccCCCC-CcCCHHHHHHHHHHHHHhcCCCEEEEeCcccccC
Confidence 99998621 1234556666766665543 356666443 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHh-hCCCEEEEEecCccHHHHHhhCeEEEEecC---cE-EEEEcCC
Q 045902 1055 ARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG---GH-VIYAGPL 1108 (1472)
Q Consensus 1055 ~~~~~~i~~~l~~l~-~~g~tvi~t~H~~~~~~~~~~D~v~~l~~g---g~-v~~~g~~ 1108 (1472)
+.+++.|++.|+++. .+++|+|+++|+++ ..+.+|++++|++| |+ ++..|+.
T Consensus 1391 ~~sE~~I~~~L~~~~~~~~~TvIiIaHRls--ti~~aD~Ivvl~~~~~~G~iv~e~Gth 1447 (1466)
T PTZ00265 1391 SNSEKLIEKTIVDIKDKADKTIITIAHRIA--SIKRSDKIVVFNNPDRTGSFVQAHGTH 1447 (1466)
T ss_pred HHHHHHHHHHHHHHhccCCCEEEEEechHH--HHHhCCEEEEEeCCCCCCCEEEEecCH
Confidence 999999999999986 35899999999964 67889999999872 56 5578874
No 19
>PLN03232 ABC transporter C family member; Provisional
Probab=100.00 E-value=4.9e-64 Score=690.15 Aligned_cols=210 Identities=21% Similarity=0.289 Sum_probs=175.4
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.|+|+++.++. +...+|+|||++|+|||.+||+||||||||||+++|.|..+ +.+|+|.+||.++
T Consensus 1234 ~I~f~nVsf~Y~~-----------~~~~vL~~isl~I~~GekvaIVG~SGSGKSTL~~lL~rl~~--p~~G~I~IdG~di 1300 (1495)
T PLN03232 1234 SIKFEDVHLRYRP-----------GLPPVLHGLSFFVSPSEKVGVVGRTGAGKSSMLNALFRIVE--LEKGRIMIDDCDV 1300 (1495)
T ss_pred cEEEEEEEEEECC-----------CCCcccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCc--CCCceEEECCEEh
Confidence 5889999887731 22469999999999999999999999999999999999887 4589999999986
Q ss_pred Ch---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc-------ccccCCCCCCCCCHH
Q 045902 957 KQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR-------NSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 957 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~-------~~~~~~~~~~~LSgG 1026 (1472)
.+ ..+|+.++||||++.+++. |++|||.+.. ...++.+.++++..++.+.. |+.++.. ..+||||
T Consensus 1301 ~~i~~~~lR~~i~iVpQdp~LF~g-TIr~NL~~~~---~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~-G~~LSgG 1375 (1495)
T PLN03232 1301 AKFGLTDLRRVLSIIPQSPVLFSG-TVRFNIDPFS---EHNDADLWEALERAHIKDVIDRNPFGLDAEVSEG-GENFSVG 1375 (1495)
T ss_pred hhCCHHHHHhhcEEECCCCeeeCc-cHHHHcCCCC---CCCHHHHHHHHHHcCCHHHHHhCcCCCCceecCC-CCCCCHH
Confidence 43 5678889999999999875 9999997532 22345566667766665432 3344433 3579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....||+|++|++ |+++..|
T Consensus 1376 QrQrlaLARALLr~~~ILILDEATSaLD~~Te~~Iq~~L~~~~-~~~TvI~IAHRl~--ti~~~DrIlVL~~-G~ivE~G 1451 (1495)
T PLN03232 1376 QRQLLSLARALLRRSKILVLDEATASVDVRTDSLIQRTIREEF-KSCTMLVIAHRLN--TIIDCDKILVLSS-GQVLEYD 1451 (1495)
T ss_pred HHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEeCCHH--HHHhCCEEEEEEC-CEEEEEC
Confidence 9999999999999999999999999999999999999999875 4799999999964 5677999999985 7999999
Q ss_pred CC
Q 045902 1107 PL 1108 (1472)
Q Consensus 1107 ~~ 1108 (1472)
+.
T Consensus 1452 t~ 1453 (1495)
T PLN03232 1452 SP 1453 (1495)
T ss_pred CH
Confidence 75
No 20
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.3e-62 Score=615.90 Aligned_cols=451 Identities=23% Similarity=0.322 Sum_probs=340.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDK--SLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 259 (1472)
+.+|+|+|+.+++||+++|+||||||||||||+|+|.+++ + +|+|.++|+++..... ++.++||+|++.++
T Consensus 18 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (506)
T PRK13549 18 VKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTY---EGEIIFEGEELQASNIRDTERAGIAIIHQELALV 94 (506)
T ss_pred eEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCC---CeEEEECCEECCCCCHHHHHHCCeEEEEeccccC
Confidence 3699999999999999999999999999999999999885 4 8999999998865432 35699999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||+||+.+.......+. ....+ . ...++.+++.+||++..|+.+++
T Consensus 95 ~~~tv~e~l~~~~~~~~~~~-------~~~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~ 143 (506)
T PRK13549 95 KELSVLENIFLGNEITPGGI-------MDYDA----------M--------------YLRAQKLLAQLKLDINPATPVGN 143 (506)
T ss_pred CCCcHHHHhhhcccccccCC-------cCHHH----------H--------------HHHHHHHHHHcCCCCCcccchhh
Confidence 99999999988643211000 00000 0 01235678899998888877765
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
|||||||||+||+||+.+|++|||||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|
T Consensus 144 -----LSgGqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvi~~tH~~-~~~~~~~d~v~~l 216 (506)
T PRK13549 144 -----LGLGQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKA-HGIACIYISHKL-NEVKAISDTICVI 216 (506)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCcH-HHHHHhcCEEEEE
Confidence 999999999999999999999999999999999999999999999975 578888877654 4777899999999
Q ss_pred cCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhh
Q 045902 420 SEGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDEL 499 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~ 499 (1472)
++|++++.|+.+++.. .+. .+.+
T Consensus 217 ~~G~i~~~~~~~~~~~---------------~~~-----------------------------~~~~------------- 239 (506)
T PRK13549 217 RDGRHIGTRPAAGMTE---------------DDI-----------------------------ITMM------------- 239 (506)
T ss_pred ECCEEeeecccccCCH---------------HHH-----------------------------HHHh-------------
Confidence 9999998886432200 000 0000
Q ss_pred cCCCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchh
Q 045902 500 RVPYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFY 579 (1472)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~ 579 (1472)
. + . ..
T Consensus 240 ---------------------------------------------------------------~--~--~-~~------- 244 (506)
T PRK13549 240 ---------------------------------------------------------------V--G--R-EL------- 244 (506)
T ss_pred ---------------------------------------------------------------h--C--c-Cc-------
Confidence 0 0 0 00
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHH
Q 045902 580 GALFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFR 659 (1472)
Q Consensus 580 g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~ 659 (1472)
T Consensus 245 -------------------------------------------------------------------------------- 244 (506)
T PRK13549 245 -------------------------------------------------------------------------------- 244 (506)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcC
Q 045902 660 QLLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLD 739 (1472)
Q Consensus 660 ~~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~ 739 (1472)
+ ..
T Consensus 245 -----------------------------------------------------~----------------------~~-- 247 (506)
T PRK13549 245 -----------------------------------------------------T----------------------AL-- 247 (506)
T ss_pred -----------------------------------------------------c----------------------cc--
Confidence 0 00
Q ss_pred CCCCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCcc
Q 045902 740 ERWSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSK 819 (1472)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~ 819 (1472)
. +. .
T Consensus 248 --~----~~--------------------------------------------------------------------~-- 251 (506)
T PRK13549 248 --Y----PR--------------------------------------------------------------------E-- 251 (506)
T ss_pred --c----cc--------------------------------------------------------------------c--
Confidence 0 00 0
Q ss_pred cccChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhccccc
Q 045902 820 KQSNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIE 899 (1472)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (1472)
. . . . ....+.++|+++.++.
T Consensus 252 --------------~--~-~---------------------------~------~~~~l~~~~l~~~~~~---------- 271 (506)
T PRK13549 252 --------------P--H-T---------------------------I------GEVILEVRNLTAWDPV---------- 271 (506)
T ss_pred --------------c--c-C---------------------------C------CCceEEEecCcccccc----------
Confidence 0 0 0 0 0001344444432210
Q ss_pred cccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCC---
Q 045902 900 ENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQND--- 972 (1472)
Q Consensus 900 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~--- 972 (1472)
.+++.+|+||||+|++||++||+||||||||||+++|+|..++ +.+|+|.++|.++.. ...++.+||++|++
T Consensus 272 ~~~~~vl~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 350 (506)
T PRK13549 272 NPHIKRVDDVSFSLRRGEILGIAGLVGAGRTELVQCLFGAYPG-RWEGEIFIDGKPVKIRNPQQAIAQGIAMVPEDRKRD 350 (506)
T ss_pred ccccccccceeeEEcCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCcEEEECCEECCCCCHHHHHHCCCEEeCcchhhC
Confidence 0124589999999999999999999999999999999998652 148999999987532 12345689999985
Q ss_pred CCCCCCCHHHHHHHHHH--cCC----Cch---HHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 045902 973 IHSPNVTIYESLLYSAW--LRL----PKD---MFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPS 1042 (1472)
Q Consensus 973 ~~~~~lTv~e~l~~~~~--l~~----~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~ 1042 (1472)
.+++.+||.|++.+... ... +.. ..++++++.+++. +..++.+ ..|||||||||+||++|+.+|+
T Consensus 351 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrv~lA~al~~~p~ 425 (506)
T PRK13549 351 GIVPVMGVGKNITLAALDRFTGGSRIDDAAELKTILESIQRLKVKTASPELAI-----ARLSGGNQQKAVLAKCLLLNPK 425 (506)
T ss_pred CCcCCCCHHHHhhhhhhhhhccCcccChHHHHHHHHHHHHhcCccCCCccccc-----ccCCHHHHHHHHHHHHHhhCCC
Confidence 46788999999986531 111 111 3466788888875 4555543 4799999999999999999999
Q ss_pred CccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1043 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1043 il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
+|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|.+ |+++..|+.++
T Consensus 426 lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~~sHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 491 (506)
T PRK13549 426 ILILDEPTRGIDVGAKYEIYKLINQLVQQGVAIIVISSELP-EVLGLSDRVLVMHE-GKLKGDLINHN 491 (506)
T ss_pred EEEEcCCCCCcCHhHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEecccc
Confidence 99999999999999999999999999888999999999976 47788999999986 78888887654
No 21
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-63 Score=620.64 Aligned_cols=451 Identities=23% Similarity=0.314 Sum_probs=339.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+++.
T Consensus 18 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 94 (510)
T PRK09700 18 VHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHEPT---KGTITINNINYNKLDHKLAAQLGIGIIYQELSVIDE 94 (510)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcCCC---ccEEEECCEECCCCCHHHHHHCCeEEEeecccccCC
Confidence 36999999999999999999999999999999999999887 8999999998865432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.++...... .+.. ...... +. ...++.+++.+||++..|+.+++
T Consensus 95 ~tv~e~l~~~~~~~~~--~~~~-~~~~~~----------~~--------------~~~~~~~l~~~gl~~~~~~~~~~-- 145 (510)
T PRK09700 95 LTVLENLYIGRHLTKK--VCGV-NIIDWR----------EM--------------RVRAAMMLLRVGLKVDLDEKVAN-- 145 (510)
T ss_pred CcHHHHhhhccccccc--cccc-cccCHH----------HH--------------HHHHHHHHHHcCCCCCcccchhh--
Confidence 9999999875321000 0000 000000 00 01235678999999888877765
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..++.+++|++++|++
T Consensus 146 ---LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiivsHd-~~~~~~~~d~v~~l~~ 220 (510)
T PRK09700 146 ---LSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRK-EGTAIVYISHK-LAEIRRICDRYTVMKD 220 (510)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeCC-HHHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999976 47888887765 4577789999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhcC
Q 045902 422 GEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELRV 501 (1472)
Q Consensus 422 G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~~ 501 (1472)
|++++.|+++++.. .+. .+..
T Consensus 221 G~i~~~g~~~~~~~---------------~~~-----------------------------~~~~--------------- 241 (510)
T PRK09700 221 GSSVCSGMVSDVSN---------------DDI-----------------------------VRLM--------------- 241 (510)
T ss_pred CEEeeecchhhCCH---------------HHH-----------------------------HHHh---------------
Confidence 99999887654210 000 0000
Q ss_pred CCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhhH
Q 045902 502 PYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYGA 581 (1472)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g~ 581 (1472)
+ + . ..
T Consensus 242 ------------------------------------------------------------~---~--~-~~--------- 246 (510)
T PRK09700 242 ------------------------------------------------------------V---G--R-EL--------- 246 (510)
T ss_pred ------------------------------------------------------------c---C--C-Cc---------
Confidence 0 0 0 00
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHHH
Q 045902 582 LFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQL 661 (1472)
Q Consensus 582 lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 661 (1472)
T Consensus 247 -------------------------------------------------------------------------------- 246 (510)
T PRK09700 247 -------------------------------------------------------------------------------- 246 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCCC
Q 045902 662 LAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDER 741 (1472)
Q Consensus 662 l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~~ 741 (1472)
...+
T Consensus 247 ------------------------------------------------------------------------~~~~---- 250 (510)
T PRK09700 247 ------------------------------------------------------------------------QNRF---- 250 (510)
T ss_pred ------------------------------------------------------------------------cccc----
Confidence 0000
Q ss_pred CCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCcccc
Q 045902 742 WSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSKKQ 821 (1472)
Q Consensus 742 ~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1472)
+. . .
T Consensus 251 -----~~-----~--------------------------------------------------------------~---- 254 (510)
T PRK09700 251 -----NA-----M--------------------------------------------------------------K---- 254 (510)
T ss_pred -----cc-----c--------------------------------------------------------------c----
Confidence 00 0 0
Q ss_pred cChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhccccccc
Q 045902 822 SNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEEN 901 (1472)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1472)
. .... . ..+..+.++|++.. +
T Consensus 255 ------------~-~~~~---------------------~-----------~~~~~l~~~~l~~~-------------~- 275 (510)
T PRK09700 255 ------------E-NVSN---------------------L-----------AHETVFEVRNVTSR-------------D- 275 (510)
T ss_pred ------------c-cccc---------------------C-----------CCCcEEEEeCcccc-------------C-
Confidence 0 0000 0 00012455555431 1
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccC---CCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQN---DIH 974 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~---~~~ 974 (1472)
..+|+|+||+|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ...++.+||++|+ ..+
T Consensus 276 -~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLlk~i~Gl~~p--~~G~I~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 352 (510)
T PRK09700 276 -RKKVRDISFSVCRGEILGFAGLVGSGRTELMNCLFGVDKR--AGGEIRLNGKDISPRSPLDAVKKGMAYITESRRDNGF 352 (510)
T ss_pred -CCcccceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcC--CCCeEEECCEECCCCCHHHHHHCCcEEccCccccCCC
Confidence 1389999999999999999999999999999999998763 58999999987532 1234568999998 457
Q ss_pred CCCCCHHHHHHHHHHcC---------C-Cc-h--HHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhC
Q 045902 975 SPNVTIYESLLYSAWLR---------L-PK-D--MFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVAN 1040 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l~---------~-~~-~--~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~ 1040 (1472)
++.+||.|++.+....+ . .. + ..++++++.+++. +..++.+ ..|||||||||+||++|+.+
T Consensus 353 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrv~lAral~~~ 427 (510)
T PRK09700 353 FPNFSIAQNMAISRSLKDGGYKGAMGLFHEVDEQRTAENQRELLALKCHSVNQNI-----TELSGGNQQKVLISKWLCCC 427 (510)
T ss_pred cCCCcHHHHhccccccccccccccccccChHHHHHHHHHHHHhcCCCCCCccCcc-----ccCChHHHHHHHHHHHHhcC
Confidence 88899999998643210 0 11 1 2356778888885 5555543 47999999999999999999
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1041 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1041 p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+||+|||||+|||+.++..+++.|++++++|.|||++|||+. ++.+.||++++|++ |+++..++.
T Consensus 428 p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 493 (510)
T PRK09700 428 PEVIIFDEPTRGIDVGAKAEIYKVMRQLADDGKVILMVSSELP-EIITVCDRIAVFCE-GRLTQILTN 493 (510)
T ss_pred CCEEEECCCCCCcCHHHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecC
Confidence 9999999999999999999999999999878999999999976 57788999999986 688887764
No 22
>PRK10261 glutathione transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-62 Score=623.68 Aligned_cols=198 Identities=23% Similarity=0.273 Sum_probs=166.3
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCC--CC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQND--IH 974 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~--~~ 974 (1472)
..+|+||||+|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++ .+
T Consensus 337 ~~~l~~vs~~i~~Ge~~~lvG~nGsGKSTLlk~i~Gl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~i~~v~Q~~~~~l 414 (623)
T PRK10261 337 VHAVEKVSFDLWPGETLSLVGESGSGKSTTGRALLRLVE--SQGGEIIFNGQRIDTLSPGKLQALRRDIQFIFQDPYASL 414 (623)
T ss_pred eEEEeeeEeEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCcEEEECCEECCcCCHHHHHHhcCCeEEEecCchhhc
Confidence 469999999999999999999999999999999999876 358999999987532 12356799999997 57
Q ss_pred CCCCCHHHHHHHHHHcCC--Cch---HHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 045902 975 SPNVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE 1048 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDE 1048 (1472)
++.+||.|++.+....+. ... ..++++++.+++. ...++. +..|||||||||+|||||+.+|++|||||
T Consensus 415 ~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~-----~~~LSgGqrQRv~iAraL~~~p~llllDE 489 (623)
T PRK10261 415 DPRQTVGDSIMEPLRVHGLLPGKAAAARVAWLLERVGLLPEHAWRY-----PHEFSGGQRQRICIARALALNPKVIIADE 489 (623)
T ss_pred CCCCCHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 889999999987643321 111 3466778888874 344443 34799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1049 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1049 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
||+|||+.++..++++|++++++ |.|||++|||++ .+.+.||++++|.+ |++++.|+..
T Consensus 490 Pts~LD~~~~~~i~~ll~~l~~~~g~tvi~isHdl~-~v~~~~dri~vl~~-G~iv~~g~~~ 549 (623)
T PRK10261 490 AVSALDVSIRGQIINLLLDLQRDFGIAYLFISHDMA-VVERISHRVAVMYL-GQIVEIGPRR 549 (623)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 99999999999999999999765 899999999986 47788999999985 7899988753
No 23
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=2e-62 Score=613.57 Aligned_cols=443 Identities=21% Similarity=0.352 Sum_probs=338.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++.
T Consensus 17 ~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK10762 17 VKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRD---AGSILYLGKEVTFNGPKSSQEAGIGIIHQELNLIPQ 93 (501)
T ss_pred eEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHhCCEEEEEcchhccCC
Confidence 46999999999999999999999999999999999999887 8999999998754321 3469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.|+......... ....+ . ...++.+++.+||++..|..+++
T Consensus 94 ~tv~e~l~~~~~~~~~~~~------~~~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~-- 141 (501)
T PRK10762 94 LTIAENIFLGREFVNRFGR------IDWKK----------M--------------YAEADKLLARLNLRFSSDKLVGE-- 141 (501)
T ss_pred CcHHHHhhhccccccccCc------cCHHH----------H--------------HHHHHHHHHHcCCCCCccCchhh--
Confidence 9999999886432100000 00000 0 00135578999999888877765
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 142 ---LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~~~tvii~sHd~-~~~~~~~d~i~~l~~ 216 (501)
T PRK10762 142 ---LSIGEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKS-QGRGIVYISHRL-KEIFEICDDVTVFRD 216 (501)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEEeC
Confidence 999999999999999999999999999999999999999999999975 478888877654 577889999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhcC
Q 045902 422 GEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELRV 501 (1472)
Q Consensus 422 G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~~ 501 (1472)
|+++..|+.+++.. ++..+.+.
T Consensus 217 G~i~~~~~~~~~~~--------------------------------------------~~~~~~~~-------------- 238 (501)
T PRK10762 217 GQFIAEREVADLTE--------------------------------------------DSLIEMMV-------------- 238 (501)
T ss_pred CEEEEecCcCcCCH--------------------------------------------HHHHHHhc--------------
Confidence 99998776432100 00000000
Q ss_pred CCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhhH
Q 045902 502 PYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYGA 581 (1472)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g~ 581 (1472)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T PRK10762 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHHH
Q 045902 582 LFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQL 661 (1472)
Q Consensus 582 lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 661 (1472)
T Consensus 239 -------------------------------------------------------------------------------- 238 (501)
T PRK10762 239 -------------------------------------------------------------------------------- 238 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCCC
Q 045902 662 LAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDER 741 (1472)
Q Consensus 662 l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~~ 741 (1472)
+..
T Consensus 239 -----------------------------------------------------------------------------~~~ 241 (501)
T PRK10762 239 -----------------------------------------------------------------------------GRK 241 (501)
T ss_pred -----------------------------------------------------------------------------CCC
Confidence 000
Q ss_pred CCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCcccc
Q 045902 742 WSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSKKQ 821 (1472)
Q Consensus 742 ~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1472)
.....+.
T Consensus 242 ~~~~~~~------------------------------------------------------------------------- 248 (501)
T PRK10762 242 LEDQYPR------------------------------------------------------------------------- 248 (501)
T ss_pred ccccccc-------------------------------------------------------------------------
Confidence 0000000
Q ss_pred cChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhccccccc
Q 045902 822 SNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEEN 901 (1472)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1472)
...+ + .+..+.++|++
T Consensus 249 -------------~~~~---------------------------------~-~~~~l~~~~l~----------------- 264 (501)
T PRK10762 249 -------------LDKA---------------------------------P-GEVRLKVDNLS----------------- 264 (501)
T ss_pred -------------cccC---------------------------------C-CCcEEEEeCcc-----------------
Confidence 0000 0 00123445543
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCC---CC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQND---IH 974 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~---~~ 974 (1472)
..+|+|+||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.++.. ...++.+||++|++ .+
T Consensus 265 -~~~l~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~G~~~p--~~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 341 (501)
T PRK10762 265 -GPGVNDVSFTLRKGEILGVSGLMGAGRTELMKVLYGALPR--TSGYVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGL 341 (501)
T ss_pred -cCCcccceEEEcCCcEEEEecCCCCCHHHHHHHHhCCCCC--CceEEEECCEECCCCCHHHHHHCCCEEecCccccCCC
Confidence 1269999999999999999999999999999999998763 58999999987532 12345689999996 46
Q ss_pred CCCCCHHHHHHHHHH--c-C----CCc---hHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 045902 975 SPNVTIYESLLYSAW--L-R----LPK---DMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSI 1043 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~--l-~----~~~---~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~i 1043 (1472)
++.+||.|++.+... . . ... ...++++++.+++. +..++.+ ..|||||||||+||++|+.+|++
T Consensus 342 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGekqrv~lA~al~~~p~l 416 (501)
T PRK10762 342 VLGMSVKENMSLTALRYFSRAGGSLKHADEQQAVSDFIRLFNIKTPSMEQAI-----GLLSGGNQQKVAIARGLMTRPKV 416 (501)
T ss_pred cCCCcHHHHhhhhhhhhhcccccccCHHHHHHHHHHHHHhcCCCCCCccCch-----hhCCHHHHHHHHHHHHHhhCCCE
Confidence 788999999986431 1 1 111 13456778888874 4555543 47999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1044 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1044 l~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
|+|||||+|||+.++..+.+.|++++++|.|||++||+++ ++.+.||++++|++ |+++..|+..+
T Consensus 417 llLDEPt~~LD~~~~~~l~~~l~~~~~~g~tviivtHd~~-~~~~~~d~v~~l~~-G~i~~~~~~~~ 481 (501)
T PRK10762 417 LILDEPTRGVDVGAKKEIYQLINQFKAEGLSIILVSSEMP-EVLGMSDRILVMHE-GRISGEFTREQ 481 (501)
T ss_pred EEEcCCCCCCCHhHHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHhhCCEEEEEEC-CEEEEEecccc
Confidence 9999999999999999999999999878999999999986 57788999999985 78888887654
No 24
>PRK15134 microcin C ABC transporter ATP-binding protein YejF; Provisional
Probab=100.00 E-value=8.9e-62 Score=611.58 Aligned_cols=196 Identities=24% Similarity=0.340 Sum_probs=163.8
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---h---cccceeEEeccCC--CC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---E---TFARISGYCEQND--IH 974 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~---~~~~~~gyv~Q~~--~~ 974 (1472)
+.+|+||||+|++||++||+||||||||||+++|+|..+ .+|+|.++|.++.. . .+++.+||++|++ .+
T Consensus 299 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLlk~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~l 375 (529)
T PRK15134 299 NVVVKNISFTLRPGETLGLVGESGSGKSTTGLALLRLIN---SQGEIWFDGQPLHNLNRRQLLPVRHRIQVVFQDPNSSL 375 (529)
T ss_pred ceeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhCcCC---CCcEEEECCEEccccchhhHHHhhhceEEEEeCchhhc
Confidence 469999999999999999999999999999999999864 48999999987532 1 1345689999996 47
Q ss_pred CCCCCHHHHHHHHHHcC---CCc---hHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 045902 975 SPNVTIYESLLYSAWLR---LPK---DMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMD 1047 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l~---~~~---~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LD 1047 (1472)
++.+||.|++.+....+ .+. +..++++++.+++. ...+.. +..|||||||||+||++|+.+|++|+||
T Consensus 376 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~llllD 450 (529)
T PRK15134 376 NPRLNVLQIIEEGLRVHQPTLSAAQREQQVIAVMEEVGLDPETRHRY-----PAEFSGGQRQRIAIARALILKPSLIILD 450 (529)
T ss_pred CCcccHHHHHHHHHHhccccCChHHHHHHHHHHHHHcCCCHHHHhcC-----CccCCHHHHHHHHHHHHHhCCCCEEEee
Confidence 78899999998864322 121 13456778888875 344543 3479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1048 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1048 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|||+|||+.++..+++.|++++++ |+|||++||+++ .+.+.||++++|++ |+++..|+.
T Consensus 451 EPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 510 (529)
T PRK15134 451 EPTSSLDKTVQAQILALLKSLQQKHQLAYLFISHDLH-VVRALCHQVIVLRQ-GEVVEQGDC 510 (529)
T ss_pred CCccccCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEEEcCH
Confidence 999999999999999999999865 899999999976 46778999999986 788888874
No 25
>TIGR00957 MRP_assoc_pro multi drug resistance-associated protein (MRP). This model describes multi drug resistance-associated protein (MRP) in eukaryotes. The multidrug resistance-associated protein is an integral membrane protein that causes multidrug resistance when overexpressed in mammalian cells. It belongs to ABC transporter superfamily. The protein topology and function was experimentally demonstrated by epitope tagging and immunofluorescence. Insertion of tags in the critical regions associated with drug efflux, abrogated its function. The C-terminal domain seem to highly conserved.
Probab=100.00 E-value=2.4e-61 Score=664.42 Aligned_cols=211 Identities=20% Similarity=0.228 Sum_probs=175.8
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
..+.|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1283 g~I~f~nVsf~Y~~-----------~~~~vL~~is~~I~~GekiaIVGrTGsGKSTL~~lL~rl~~--~~~G~I~IdG~d 1349 (1522)
T TIGR00957 1283 GRVEFRNYCLRYRE-----------DLDLVLRHINVTIHGGEKVGIVGRTGAGKSSLTLGLFRINE--SAEGEIIIDGLN 1349 (1522)
T ss_pred CcEEEEEEEEEeCC-----------CCcccccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCcc--CCCCeEEECCEE
Confidence 35889999888742 12369999999999999999999999999999999999877 458999999998
Q ss_pred CCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc-------ccccCCCCCCCCCH
Q 045902 956 KKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR-------NSLVGLPGVDGLST 1025 (1472)
Q Consensus 956 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~-------~~~~~~~~~~~LSg 1025 (1472)
+.+ ..+|+.++||||++.+++. |++|||.... ...++.+.++++..++.+.- |+.++.. ..+|||
T Consensus 1350 I~~i~~~~LR~~i~iVpQdp~LF~g-TIr~NLdp~~---~~sdeei~~al~~a~l~~~I~~lp~GLdt~v~e~-G~~LSg 1424 (1522)
T TIGR00957 1350 IAKIGLHDLRFKITIIPQDPVLFSG-SLRMNLDPFS---QYSDEEVWWALELAHLKTFVSALPDKLDHECAEG-GENLSV 1424 (1522)
T ss_pred ccccCHHHHHhcCeEECCCCcccCc-cHHHHcCccc---CCCHHHHHHHHHHcCcHHHHhhCccCCCceecCC-CCcCCH
Confidence 753 5678889999999999976 9999996321 22345566677776665432 4444433 357999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
|||||++|||||+++|+||+||||||+||+++.+.|++.|++.. +++|||+++|+++ ....+|+|++|++ |+++..
T Consensus 1425 GQrQrl~LARALLr~~~ILiLDEaTSalD~~Te~~Iq~~l~~~~-~~~TvI~IAHRl~--ti~~~DrIlVld~-G~IvE~ 1500 (1522)
T TIGR00957 1425 GQRQLVCLARALLRKTKILVLDEATAAVDLETDNLIQSTIRTQF-EDCTVLTIAHRLN--TIMDYTRVIVLDK-GEVAEF 1500 (1522)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-CEEEEE
Confidence 99999999999999999999999999999999999999999875 4799999999964 6778999999985 799999
Q ss_pred cCC
Q 045902 1106 GPL 1108 (1472)
Q Consensus 1106 g~~ 1108 (1472)
|+.
T Consensus 1501 G~~ 1503 (1522)
T TIGR00957 1501 GAP 1503 (1522)
T ss_pred CCH
Confidence 986
No 26
>TIGR03269 met_CoM_red_A2 methyl coenzyme M reductase system, component A2. The enzyme that catalyzes the final step in methanogenesis, methyl coenzyme M reductase, contains alpha, beta, and gamma chains. In older literature, the complex of alpha, beta, and gamma chains was termed component C, while this single chain protein was termed methyl coenzyme M reductase system component A2.
Probab=100.00 E-value=1.2e-61 Score=609.52 Aligned_cols=197 Identities=25% Similarity=0.400 Sum_probs=162.2
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEc-Ccc---CCh------hcccceeEEeccCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISIS-GYP---KKQ------ETFARISGYCEQND 972 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~-G~~---~~~------~~~~~~~gyv~Q~~ 972 (1472)
+.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++ |.+ ... ...++.+||++|++
T Consensus 297 ~~il~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~~g~~~~~~~~~~~~~~~~~~~~i~~v~q~~ 374 (520)
T TIGR03269 297 VKAVDNVSLEVKEGEIFGIVGTSGAGKTTLSKIIAGVLE--PTSGEVNVRVGDEWVDMTKPGPDGRGRAKRYIGILHQEY 374 (520)
T ss_pred ceEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEEecCCccccccccchhhHHHHhhhEEEEccCc
Confidence 469999999999999999999999999999999999876 358999996 532 111 12345689999999
Q ss_pred CCCCCCCHHHHHHHHHHcCCCch---HHHHHHHHHccccc-----ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 045902 973 IHSPNVTIYESLLYSAWLRLPKD---MFVEEVMELVEMKA-----LRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSII 1044 (1472)
Q Consensus 973 ~~~~~lTv~e~l~~~~~l~~~~~---~~~~~v~~~l~l~~-----~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il 1044 (1472)
.+++.+||.|++.+...+..+.+ ..++++++.+++.+ ..++. +..|||||||||+||+||+.+|++|
T Consensus 375 ~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~-----~~~LSgGq~qrv~laral~~~p~lL 449 (520)
T TIGR03269 375 DLYPHRTVLDNLTEAIGLELPDELARMKAVITLKMVGFDEEKAEEILDKY-----PDELSEGERHRVALAQVLIKEPRIV 449 (520)
T ss_pred ccCCCCcHHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCCCccchhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 88899999999987543322222 34566778888754 23333 3579999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1045 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1045 ~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+|||||+|||+.++..+++.|++++++ |.|||++||+++ .+.+.||++++|++ |+++..|+.
T Consensus 450 llDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvi~vsHd~~-~~~~~~d~i~~l~~-G~i~~~g~~ 512 (520)
T TIGR03269 450 ILDEPTGTMDPITKVDVTHSILKAREEMEQTFIIVSHDMD-FVLDVCDRAALMRD-GKIVKIGDP 512 (520)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999999765 899999999986 47788999999985 788888864
No 27
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.3e-61 Score=606.46 Aligned_cols=447 Identities=20% Similarity=0.281 Sum_probs=337.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+++.
T Consensus 24 ~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 100 (510)
T PRK15439 24 VEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVPPD---SGTLEIGGNPCARLTPAKAHQLGIYLVPQEPLLFPN 100 (510)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEeccCccCCC
Confidence 35999999999999999999999999999999999999887 8999999998765432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.|.... .+ + . ...++.+++.+||++..|+.+++
T Consensus 101 ~tv~e~l~~~~~~------~~---~----~-------------------------~~~~~~~l~~~~l~~~~~~~~~~-- 140 (510)
T PRK15439 101 LSVKENILFGLPK------RQ---A----S-------------------------MQKMKQLLAALGCQLDLDSSAGS-- 140 (510)
T ss_pred CcHHHHhhccccc------ch---H----H-------------------------HHHHHHHHHHcCCCccccCChhh--
Confidence 9999999875310 00 0 0 00134578899998888877765
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 141 ---LSgG~~qrv~la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiiivtHd~-~~~~~~~d~i~~l~~ 215 (510)
T PRK15439 141 ---LEVADRQIVEILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLA-QGVGIVFISHKL-PEIRQLADRISVMRD 215 (510)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999976 478888877654 467789999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhcC
Q 045902 422 GEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELRV 501 (1472)
Q Consensus 422 G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~~ 501 (1472)
|++++.|+.+++... +.+ +.+...
T Consensus 216 G~i~~~g~~~~~~~~---------------~~~-----------------------------~~~~~~------------ 239 (510)
T PRK15439 216 GTIALSGKTADLSTD---------------DII-----------------------------QAITPA------------ 239 (510)
T ss_pred CEEEEecChHHcCHH---------------HHH-----------------------------HHHhCc------------
Confidence 999999987653210 000 000000
Q ss_pred CCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhhH
Q 045902 502 PYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYGA 581 (1472)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g~ 581 (1472)
. .. .....
T Consensus 240 ----~-~~------------------------------------------------------------~~~~~------- 247 (510)
T PRK15439 240 ----A-RE------------------------------------------------------------KSLSA------- 247 (510)
T ss_pred ----c-cc------------------------------------------------------------ccccc-------
Confidence 0 00 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHHH
Q 045902 582 LFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQL 661 (1472)
Q Consensus 582 lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 661 (1472)
T Consensus 248 -------------------------------------------------------------------------------- 247 (510)
T PRK15439 248 -------------------------------------------------------------------------------- 247 (510)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCCC
Q 045902 662 LAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDER 741 (1472)
Q Consensus 662 l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~~ 741 (1472)
.. .
T Consensus 248 --------------------------------------------------~~---------------------------~ 250 (510)
T PRK15439 248 --------------------------------------------------SQ---------------------------K 250 (510)
T ss_pred --------------------------------------------------cc---------------------------c
Confidence 00 0
Q ss_pred CCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCcccc
Q 045902 742 WSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSKKQ 821 (1472)
Q Consensus 742 ~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1472)
.. . .+ +
T Consensus 251 ~~----~-----------------~~---------------------------------~-------------------- 256 (510)
T PRK15439 251 LW----L-----------------EL---------------------------------P-------------------- 256 (510)
T ss_pred cc----c-----------------cc---------------------------------c--------------------
Confidence 00 0 00 0
Q ss_pred cChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhccccccc
Q 045902 822 SNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEEN 901 (1472)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1472)
....+. . ..+..+..+|++.
T Consensus 257 ------------~~~~~~---------------------~-----------~~~~~l~~~~l~~---------------- 276 (510)
T PRK15439 257 ------------GNRRQQ---------------------A-----------AGAPVLTVEDLTG---------------- 276 (510)
T ss_pred ------------cccccc---------------------C-----------CCCceEEEeCCCC----------------
Confidence 000000 0 0001244555431
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeEEeccCC---CC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE----TFARISGYCEQND---IH 974 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~----~~~~~~gyv~Q~~---~~ 974 (1472)
.+|+|||++|++||++||+||||||||||+++|+|..++ .+|+|.++|.++... ..++.++|++|++ .+
T Consensus 277 --~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~Gl~~p--~~G~i~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~l 352 (510)
T PRK15439 277 --EGFRNISLEVRAGEILGLAGVVGAGRTELAETLYGLRPA--RGGRIMLNGKEINALSTAQRLARGLVYLPEDRQSSGL 352 (510)
T ss_pred --CCccceeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCC--CCcEEEECCEECCCCCHHHHHhCCcEECCCChhhCCc
Confidence 158999999999999999999999999999999998763 489999999875321 1234689999984 47
Q ss_pred CCCCCHHHHHHHHHH----cCCCc---hHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 045902 975 SPNVTIYESLLYSAW----LRLPK---DMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFM 1046 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~----l~~~~---~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~L 1046 (1472)
++.+|+.|++..... ..... ...++++++.+++. +..++.+ ..|||||||||+||++|+.+|+||+|
T Consensus 353 ~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgG~kqrl~la~al~~~p~lLlL 427 (510)
T PRK15439 353 YLDAPLAWNVCALTHNRRGFWIKPARENAVLERYRRALNIKFNHAEQAA-----RTLSGGNQQKVLIAKCLEASPQLLIV 427 (510)
T ss_pred cCCCcHHHHHHhhhhhhhccccChHHHHHHHHHHHHHcCCCCCCccCcc-----ccCCcHHHHHHHHHHHHhhCCCEEEE
Confidence 788999999853211 11111 13456778888885 5555543 47999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1047 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1047 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
||||+|||+.++..+.+.|++++++|.|||++||+++ ++.+.||++++|++ |+++..|..+.
T Consensus 428 DEPt~gLD~~~~~~l~~~l~~l~~~g~tiIivsHd~~-~i~~~~d~i~~l~~-G~i~~~~~~~~ 489 (510)
T PRK15439 428 DEPTRGVDVSARNDIYQLIRSIAAQNVAVLFISSDLE-EIEQMADRVLVMHQ-GEISGALTGAA 489 (510)
T ss_pred CCCCcCcChhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcccc
Confidence 9999999999999999999999888999999999986 57788999999985 78888886643
No 28
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-61 Score=603.11 Aligned_cols=444 Identities=22% Similarity=0.308 Sum_probs=335.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.+++.
T Consensus 17 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 93 (501)
T PRK11288 17 VKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQPD---AGSILIDGQEMRFASTTAALAAGVAIIYQELHLVPE 93 (501)
T ss_pred EEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHhCCEEEEEechhccCC
Confidence 35999999999999999999999999999999999999887 8999999998754321 3579999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.++......+. .... +. ...++.+++.+||++..++.+++
T Consensus 94 ~tv~~~l~~~~~~~~~~~-------~~~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~~-- 140 (501)
T PRK11288 94 MTVAENLYLGQLPHKGGI-------VNRR----------LL--------------NYEAREQLEHLGVDIDPDTPLKY-- 140 (501)
T ss_pred CCHHHHHHhcccccccCC-------CCHH----------HH--------------HHHHHHHHHHcCCCCCcCCchhh--
Confidence 999999988532100000 0000 00 01235578899998777766654
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|++|++
T Consensus 141 ---LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiiiitHd~-~~~~~~~d~i~~l~~ 215 (501)
T PRK11288 141 ---LSIGQRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRA-EGRVILYVSHRM-EEIFALCDAITVFKD 215 (501)
T ss_pred ---CCHHHHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999875 578888887765 477789999999999
Q ss_pred CeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhcC
Q 045902 422 GEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELRV 501 (1472)
Q Consensus 422 G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~~ 501 (1472)
|+++..++..+. .+.++..+.+
T Consensus 216 G~i~~~~~~~~~-------------------------------------------~~~~~~~~~~--------------- 237 (501)
T PRK11288 216 GRYVATFDDMAQ-------------------------------------------VDRDQLVQAM--------------- 237 (501)
T ss_pred CEEEeecCcccc-------------------------------------------CCHHHHHHHh---------------
Confidence 999865431000 0000000000
Q ss_pred CCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhhH
Q 045902 502 PYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYGA 581 (1472)
Q Consensus 502 ~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g~ 581 (1472)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T PRK11288 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHHH
Q 045902 582 LFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQL 661 (1472)
Q Consensus 582 lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~~ 661 (1472)
T Consensus 238 -------------------------------------------------------------------------------- 237 (501)
T PRK11288 238 -------------------------------------------------------------------------------- 237 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCCC
Q 045902 662 LAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDER 741 (1472)
Q Consensus 662 l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~~ 741 (1472)
.+..
T Consensus 238 ----------------------------------------------------------------------------~~~~ 241 (501)
T PRK11288 238 ----------------------------------------------------------------------------VGRE 241 (501)
T ss_pred ----------------------------------------------------------------------------cCCC
Confidence 0000
Q ss_pred CCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCcccc
Q 045902 742 WSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSKKQ 821 (1472)
Q Consensus 742 ~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~~~ 821 (1472)
. .. .
T Consensus 242 ------~----~~--------------------------------------------------------------~---- 245 (501)
T PRK11288 242 ------I----GD--------------------------------------------------------------I---- 245 (501)
T ss_pred ------c----cc--------------------------------------------------------------c----
Confidence 0 00 0
Q ss_pred cChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhccccccc
Q 045902 822 SNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEEN 901 (1472)
Q Consensus 822 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 901 (1472)
. ... +. . ..+..+.++|+++
T Consensus 246 --~---------~~~-~~--------------------------~------~~~~~l~~~~~~~---------------- 265 (501)
T PRK11288 246 --Y---------GYR-PR--------------------------P------LGEVRLRLDGLKG---------------- 265 (501)
T ss_pred --c---------ccc-cc--------------------------C------CCCcEEEEecccc----------------
Confidence 0 000 00 0 0001244555431
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCC---CC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQND---IH 974 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~---~~ 974 (1472)
..+++|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|+++.. ...++.++|++|++ .+
T Consensus 266 -~~~l~~isl~i~~Ge~~~iiG~NGsGKSTLlk~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 342 (501)
T PRK11288 266 -PGLREPISFSVRAGEIVGLFGLVGAGRSELMKLLYGATR--RTAGQVYLDGKPIDIRSPRDAIRAGIMLCPEDRKAEGI 342 (501)
T ss_pred -CCcccceeEEEeCCcEEEEEcCCCCCHHHHHHHHcCCCc--CCCceEEECCEECCCCCHHHHHhCCCEEcCcCHhhCCC
Confidence 148999999999999999999999999999999999876 458999999987532 12345689999986 47
Q ss_pred CCCCCHHHHHHHHHHcC-------CCc---hHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 045902 975 SPNVTIYESLLYSAWLR-------LPK---DMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSI 1043 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l~-------~~~---~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~i 1043 (1472)
++.+|+.|++.+..... ... ...++++++.+++. +..++.+ ..|||||||||+||++|+.+|++
T Consensus 343 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGq~qrl~la~al~~~p~l 417 (501)
T PRK11288 343 IPVHSVADNINISARRHHLRAGCLINNRWEAENADRFIRSLNIKTPSREQLI-----MNLSGGNQQKAILGRWLSEDMKV 417 (501)
T ss_pred cCCCCHHHHhccccchhhcccccccChHHHHHHHHHHHHhcCcccCCccCcc-----ccCCHHHHHHHHHHHHHccCCCE
Confidence 88899999997643211 011 13456777888873 4555543 47999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1044 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1044 l~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
|||||||+|||+.++..+++.|+++++.|.|||++|||++ ++.+.+|++++|.+ |++++.|+.++
T Consensus 418 llLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~i~~l~~-g~i~~~~~~~~ 482 (501)
T PRK11288 418 ILLDEPTRGIDVGAKHEIYNVIYELAAQGVAVLFVSSDLP-EVLGVADRIVVMRE-GRIAGELAREQ 482 (501)
T ss_pred EEEcCCCCCCCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHhhCCEEEEEEC-CEEEEEEcccc
Confidence 9999999999999999999999999888999999999986 57789999999985 78889887754
No 29
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=7.4e-61 Score=600.04 Aligned_cols=452 Identities=20% Similarity=0.295 Sum_probs=334.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+++|+|+|+.+++||+++|+|||||||||||++|+|.+++. ..+|+|.++|+++..... ++.++||+|++.+++.
T Consensus 14 ~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 14 VKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHG-TWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred eEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC-CCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 46999999999999999999999999999999999998751 028999999998865432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccc-cccccCc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICA-DIMVGNE 340 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~-dt~vg~~ 340 (1472)
+||+||+.+.......+... ... +. ...++.+++.+||++.. ++.++
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~------~~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~~-- 140 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRM------AYN----------AM--------------YLRAKNLLRELQLDADNVTRPVG-- 140 (500)
T ss_pred CcHHHHHHhhcccccccccc------CHH----------HH--------------HHHHHHHHHHcCCCCCcccCchh--
Confidence 99999998864321000000 000 00 01235678899998654 44455
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|+ ..++.+++|+|++|+
T Consensus 141 ---~LSgG~~qrv~iA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tviiitHd-~~~~~~~~d~i~~l~ 215 (500)
T TIGR02633 141 ---DYGGGQQQLVEIAKALNKQARLLILDEPSSSLTEKETEILLDIIRDLKA-HGVACVYISHK-LNEVKAVCDTICVIR 215 (500)
T ss_pred ---hCCHHHHHHHHHHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeCc-HHHHHHhCCEEEEEe
Confidence 4999999999999999999999999999999999999999999999975 57888887765 457778999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhc
Q 045902 421 EGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELR 500 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~ 500 (1472)
+|++++.|+.++... ++..+.+
T Consensus 216 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~-------------- 237 (500)
T TIGR02633 216 DGQHVATKDMSTMSE--------------------------------------------DDIITMM-------------- 237 (500)
T ss_pred CCeEeeecCcccCCH--------------------------------------------HHHHHHH--------------
Confidence 999987664321100 0000000
Q ss_pred CCCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhh
Q 045902 501 VPYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYG 580 (1472)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g 580 (1472)
T Consensus 238 -------------------------------------------------------------------------------- 237 (500)
T TIGR02633 238 -------------------------------------------------------------------------------- 237 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHH
Q 045902 581 ALFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQ 660 (1472)
Q Consensus 581 ~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~ 660 (1472)
.+.
T Consensus 238 -------------------------------------------------------------------~~~---------- 240 (500)
T TIGR02633 238 -------------------------------------------------------------------VGR---------- 240 (500)
T ss_pred -------------------------------------------------------------------hCc----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCC
Q 045902 661 LLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDE 740 (1472)
Q Consensus 661 ~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~ 740 (1472)
+ .+. .+
T Consensus 241 -----------------------------------------------~---~~~---------------------~~--- 246 (500)
T TIGR02633 241 -----------------------------------------------E---ITS---------------------LY--- 246 (500)
T ss_pred -----------------------------------------------c---ccc---------------------cc---
Confidence 0 000 00
Q ss_pred CCCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCccc
Q 045902 741 RWSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSKK 820 (1472)
Q Consensus 741 ~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1472)
+.
T Consensus 247 ------~~------------------------------------------------------------------------ 248 (500)
T TIGR02633 247 ------PH------------------------------------------------------------------------ 248 (500)
T ss_pred ------cc------------------------------------------------------------------------
Confidence 00
Q ss_pred ccChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhcccccc
Q 045902 821 QSNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEE 900 (1472)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (1472)
...+. .+..+.++|+++.... .
T Consensus 249 --------------~~~~~----------------------------------~~~~l~~~~l~~~~~~----------~ 270 (500)
T TIGR02633 249 --------------EPHEI----------------------------------GDVILEARNLTCWDVI----------N 270 (500)
T ss_pred --------------cccCC----------------------------------CCceEEEeCCcccccc----------c
Confidence 00000 0002344554432100 0
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCC---C
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQND---I 973 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~---~ 973 (1472)
+++.+|+|+||+|++||++||+|||||||||||++|+|..++ +.+|+|.++|.+... ...++.+||++|+. .
T Consensus 271 ~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p-~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~ 349 (500)
T TIGR02633 271 PHRKRVDDVSFSLRRGEILGVAGLVGAGRTELVQALFGAYPG-KFEGNVFINGKPVDIRNPAQAIRAGIAMVPEDRKRHG 349 (500)
T ss_pred ccccccccceeEEeCCcEEEEeCCCCCCHHHHHHHHhCCCCC-CCCeEEEECCEECCCCCHHHHHhCCCEEcCcchhhCC
Confidence 124589999999999999999999999999999999998752 148999999987532 22345689999995 5
Q ss_pred CCCCCCHHHHHHHHHH--cC----CCch---HHHHHHHHHccccc-ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 045902 974 HSPNVTIYESLLYSAW--LR----LPKD---MFVEEVMELVEMKA-LRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSI 1043 (1472)
Q Consensus 974 ~~~~lTv~e~l~~~~~--l~----~~~~---~~~~~v~~~l~l~~-~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~i 1043 (1472)
+++.+||+|++.+... .. .+.. ..++++++.+++.+ ..++.+ ..|||||||||+||++|+.+|++
T Consensus 350 l~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-----~~LSgGqkqrv~la~al~~~p~l 424 (500)
T TIGR02633 350 IVPILGVGKNITLSVLKSFCFKMRIDAAAELQIIGSAIQRLKVKTASPFLPI-----GRLSGGNQQKAVLAKMLLTNPRV 424 (500)
T ss_pred cCCCCCHHHHhcchhhhhhccCCcCCHHHHHHHHHHHHHhcCccCCCccCcc-----ccCCHHHHHHHHHHHHHhhCCCE
Confidence 7889999999987531 11 1111 34567788888753 344443 47999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1044 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1044 l~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+|||||+|||+.++..+++.|++++++|.|||++|||++ ++.+.||++++|.+ |+++..++.
T Consensus 425 llLDEPt~~LD~~~~~~l~~~l~~l~~~g~tviivsHd~~-~~~~~~d~v~~l~~-G~i~~~~~~ 487 (500)
T TIGR02633 425 LILDEPTRGVDVGAKYEIYKLINQLAQEGVAIIVVSSELA-EVLGLSDRVLVIGE-GKLKGDFVN 487 (500)
T ss_pred EEEcCCCCCcCHhHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEEcc
Confidence 9999999999999999999999999888999999999986 57788999999985 678877754
No 30
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-60 Score=593.19 Aligned_cols=442 Identities=19% Similarity=0.265 Sum_probs=332.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+++.
T Consensus 11 ~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 11 VKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQKD---SGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred EEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---ceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 46999999999999999999999999999999999999887 8999999998764322 3569999999988999
Q ss_pred CCHHHHHHHhhh-ccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 262 MTVRETLDFSGR-CLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 262 lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
+||+||+.++.. ..+... ... +. ...++.+++.+||++..++.+++
T Consensus 88 ~tv~~~l~~~~~~~~~~~~--------~~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~~- 134 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFV--------DQD----------KM--------------YRDTKAIFDELDIDIDPRAKVAT- 134 (491)
T ss_pred CCHHHHhhccccccccccc--------CHH----------HH--------------HHHHHHHHHHcCCCCCccCchhh-
Confidence 999999987532 111000 000 00 00135578899998877776654
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|++ .++.+++|+|++|+
T Consensus 135 ----LSgGq~qrv~lA~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~-~g~tvii~tH~~-~~~~~~~d~i~~l~ 208 (491)
T PRK10982 135 ----LSVSQMQMIEIAKAFSYNAKIVIMDEPTSSLTEKEVNHLFTIIRKLKE-RGCGIVYISHKM-EEIFQLCDEITILR 208 (491)
T ss_pred ----CCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCH-HHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999875 578888877654 57778999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhc
Q 045902 421 EGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELR 500 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~ 500 (1472)
+|+++..|+.+++.. ++..+.+
T Consensus 209 ~G~i~~~~~~~~~~~--------------------------------------------~~~~~~~-------------- 230 (491)
T PRK10982 209 DGQWIATQPLAGLTM--------------------------------------------DKIIAMM-------------- 230 (491)
T ss_pred CCEEEeecChhhCCH--------------------------------------------HHHHHHH--------------
Confidence 999998876532100 0000000
Q ss_pred CCCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhh
Q 045902 501 VPYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYG 580 (1472)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g 580 (1472)
T Consensus 231 -------------------------------------------------------------------------------- 230 (491)
T PRK10982 231 -------------------------------------------------------------------------------- 230 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHH
Q 045902 581 ALFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQ 660 (1472)
Q Consensus 581 ~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~ 660 (1472)
T Consensus 231 -------------------------------------------------------------------------------- 230 (491)
T PRK10982 231 -------------------------------------------------------------------------------- 230 (491)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCC
Q 045902 661 LLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDE 740 (1472)
Q Consensus 661 ~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~ 740 (1472)
.+.
T Consensus 231 -----------------------------------------------------------------------------~~~ 233 (491)
T PRK10982 231 -----------------------------------------------------------------------------VGR 233 (491)
T ss_pred -----------------------------------------------------------------------------hCC
Confidence 000
Q ss_pred CCCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCccc
Q 045902 741 RWSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSKK 820 (1472)
Q Consensus 741 ~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1472)
... .. .
T Consensus 234 ~~~---~~-----------------------------------------------------~------------------ 239 (491)
T PRK10982 234 SLT---QR-----------------------------------------------------F------------------ 239 (491)
T ss_pred Ccc---cc-----------------------------------------------------c------------------
Confidence 000 00 0
Q ss_pred ccChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhcccccc
Q 045902 821 QSNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEE 900 (1472)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (1472)
.. ... . ..+..+.++|+++.
T Consensus 240 -------------~~-~~~---------------------~-----------~~~~~i~~~~l~~~-------------- 259 (491)
T PRK10982 240 -------------PD-KEN---------------------K-----------PGEVILEVRNLTSL-------------- 259 (491)
T ss_pred -------------cc-ccC---------------------C-----------CCCcEEEEeCcccc--------------
Confidence 00 000 0 00112455665442
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeEEeccCC---C
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE----TFARISGYCEQND---I 973 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~----~~~~~~gyv~Q~~---~ 973 (1472)
.+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|+. .
T Consensus 260 -~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~i~~~~q~~~~~~ 336 (491)
T PRK10982 260 -RQPSIRDVSFDLHKGEILGIAGLVGAKRTDIVETLFGIRE--KSAGTITLHGKKINNHNANEAINHGFALVTEERRSTG 336 (491)
T ss_pred -cCcccceeeEEEeCCcEEEEecCCCCCHHHHHHHHcCCCc--CCccEEEECCEECCCCCHHHHHHCCCEEcCCchhhCC
Confidence 1248999999999999999999999999999999999876 3589999999875421 2245589999985 3
Q ss_pred CCCCCCHHHHHHHH-----HHc-C-CCc---hHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 045902 974 HSPNVTIYESLLYS-----AWL-R-LPK---DMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPS 1042 (1472)
Q Consensus 974 ~~~~lTv~e~l~~~-----~~l-~-~~~---~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~ 1042 (1472)
+++.+|+.++..+. ... . .+. ...++++++.+++. +..++. +..|||||||||+||++|+.+|+
T Consensus 337 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~la~al~~~p~ 411 (491)
T PRK10982 337 IYAYLDIGFNSLISNIRNYKNKVGLLDNSRMKSDTQWVIDSMRVKTPGHRTQ-----IGSLSGGNQQKVIIGRWLLTQPE 411 (491)
T ss_pred cccCCcHHHheehhhhhhhcccccccCcHHHHHHHHHHHHhcCccCCCcccc-----cccCCcHHHHHHHHHHHHhcCCC
Confidence 57888887763221 111 1 111 13355677777764 333443 34799999999999999999999
Q ss_pred CccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1043 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1043 il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.||++++|.+ |+++..++.
T Consensus 412 illLDEPt~gLD~~~~~~~~~~l~~l~~~~~tvi~vsHd~~-~~~~~~d~v~~l~~-g~i~~~~~~ 475 (491)
T PRK10982 412 ILMLDEPTRGIDVGAKFEIYQLIAELAKKDKGIIIISSEMP-ELLGITDRILVMSN-GLVAGIVDT 475 (491)
T ss_pred EEEEcCCCcccChhHHHHHHHHHHHHHHCCCEEEEECCChH-HHHhhCCEEEEEEC-CEEEEEEcc
Confidence 99999999999999999999999999888999999999986 47789999999986 688876654
No 31
>PTZ00243 ABC transporter; Provisional
Probab=100.00 E-value=2.7e-59 Score=641.96 Aligned_cols=211 Identities=23% Similarity=0.250 Sum_probs=176.2
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
..+.|+|+++.++. +...+|+||||+|+|||++||+|+||||||||+++|.|..+ +.+|+|.+||.+
T Consensus 1307 G~I~f~nVsf~Y~~-----------~~~~vL~~vsf~I~~GekVaIVGrTGSGKSTLl~lLlrl~~--p~~G~I~IDG~d 1373 (1560)
T PTZ00243 1307 GSLVFEGVQMRYRE-----------GLPLVLRGVSFRIAPREKVGIVGRTGSGKSTLLLTFMRMVE--VCGGEIRVNGRE 1373 (1560)
T ss_pred CeEEEEEEEEEeCC-----------CCCceeecceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEE
Confidence 46889999887731 22459999999999999999999999999999999999887 458999999998
Q ss_pred CCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc-------ccccCCCCCCCCCH
Q 045902 956 KKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR-------NSLVGLPGVDGLST 1025 (1472)
Q Consensus 956 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~-------~~~~~~~~~~~LSg 1025 (1472)
+.. ..+++.+|||||++.++.. |++|||... ....++.+.++++..++.+.. |+.+|.. ..+|||
T Consensus 1374 i~~i~l~~LR~~I~iVpQdp~LF~g-TIreNIdp~---~~~sdeeI~~Al~~a~l~~~I~~lp~Gldt~vge~-G~nLSg 1448 (1560)
T PTZ00243 1374 IGAYGLRELRRQFSMIPQDPVLFDG-TVRQNVDPF---LEASSAEVWAALELVGLRERVASESEGIDSRVLEG-GSNYSV 1448 (1560)
T ss_pred cccCCHHHHHhcceEECCCCccccc-cHHHHhCcc---cCCCHHHHHHHHHHCCChHHHhhCcccccccccCC-cCcCCH
Confidence 643 5678899999999999875 999999642 122345667777777765542 4445443 357999
Q ss_pred HHHHHHHHHHHHhhC-CCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1026 EQRKRLTIAVELVAN-PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~-p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
|||||++|||||+++ |+||+||||||+||+.+.+.|++.|++.. +++|||+++|++ +....||+|++|++ |+++.
T Consensus 1449 GQrQrLaLARALL~~~~~ILlLDEATSaLD~~te~~Iq~~L~~~~-~~~TvI~IAHRl--~ti~~~DrIlVLd~-G~VvE 1524 (1560)
T PTZ00243 1449 GQRQLMCMARALLKKGSGFILMDEATANIDPALDRQIQATVMSAF-SAYTVITIAHRL--HTVAQYDKIIVMDH-GAVAE 1524 (1560)
T ss_pred HHHHHHHHHHHHhcCCCCEEEEeCCCccCCHHHHHHHHHHHHHHC-CCCEEEEEeccH--HHHHhCCEEEEEEC-CEEEE
Confidence 999999999999996 89999999999999999999999999874 479999999996 46788999999985 79999
Q ss_pred EcCC
Q 045902 1105 AGPL 1108 (1472)
Q Consensus 1105 ~g~~ 1108 (1472)
.|+.
T Consensus 1525 ~Gt~ 1528 (1560)
T PTZ00243 1525 MGSP 1528 (1560)
T ss_pred ECCH
Confidence 9975
No 32
>TIGR01271 CFTR_protein cystic fibrosis transmembrane conductor regulator (CFTR). The model describes the cystis fibrosis transmembrane conductor regulator (CFTR) in eukaryotes. The principal role of this protein is chloride ion conductance. The protein is predicted to consist of 12 transmembrane domains. Mutations or lesions in the genetic loci have been linked to the aetiology of asthma, bronchiectasis, chronic obstructive pulmonary disease etc. Disease-causing mutations have been studied by 36Cl efflux assays in vitro cell cultures and electrophysiology, all of which point to the impairment of chloride channel stability and not the biosynthetic processing per se.
Probab=100.00 E-value=1.6e-58 Score=634.46 Aligned_cols=210 Identities=21% Similarity=0.263 Sum_probs=175.4
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
..+.|+|+++.++. +...+|+|||++|+|||++||+|+||||||||+++|+|..+ .+|+|.+||.+
T Consensus 1216 g~I~f~nVs~~Y~~-----------~~~~vL~~is~~I~~GekvaIvGrSGsGKSTLl~lL~rl~~---~~G~I~IdG~d 1281 (1490)
T TIGR01271 1216 GQMDVQGLTAKYTE-----------AGRAVLQDLSFSVEGGQRVGLLGRTGSGKSTLLSALLRLLS---TEGEIQIDGVS 1281 (1490)
T ss_pred CeEEEEEEEEEeCC-----------CCcceeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEE
Confidence 36889999988742 23579999999999999999999999999999999999875 47999999998
Q ss_pred CCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccc-------cccccCCCCCCCCCH
Q 045902 956 KKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKAL-------RNSLVGLPGVDGLST 1025 (1472)
Q Consensus 956 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~-------~~~~~~~~~~~~LSg 1025 (1472)
+.. ..+++.++|+||++.+++. |++|||.... .-.++.+.++++.+++.+. .|+.++. +..+|||
T Consensus 1282 i~~i~~~~lR~~is~IpQdp~LF~G-TIR~NLdp~~---~~tdeei~~aL~~~~L~~~i~~lp~GLdt~v~e-~G~nLSg 1356 (1490)
T TIGR01271 1282 WNSVTLQTWRKAFGVIPQKVFIFSG-TFRKNLDPYE---QWSDEEIWKVAEEVGLKSVIEQFPDKLDFVLVD-GGYVLSN 1356 (1490)
T ss_pred cccCCHHHHHhceEEEeCCCccCcc-CHHHHhCccc---CCCHHHHHHHHHHCCCHHHHHhCcccccccccc-CCCcCCH
Confidence 753 5677889999999999975 9999996422 1234566777777776543 2444443 2357999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
|||||++|||||+++|+||+||||||+||+.+...|++.|++.. +++|||+++|+++ ....||+|++|++ |+++..
T Consensus 1357 GQrQrL~LARALLr~~~ILlLDEaTS~lD~~Te~~I~~~L~~~~-~~~TvI~IaHRl~--ti~~~DrIlvL~~-G~ivE~ 1432 (1490)
T TIGR01271 1357 GHKQLMCLARSILSKAKILLLDEPSAHLDPVTLQIIRKTLKQSF-SNCTVILSEHRVE--ALLECQQFLVIEG-SSVKQY 1432 (1490)
T ss_pred HHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecCHH--HHHhCCEEEEEEC-CEEEEe
Confidence 99999999999999999999999999999999999999999875 4799999999964 5677999999985 789988
Q ss_pred cCC
Q 045902 1106 GPL 1108 (1472)
Q Consensus 1106 g~~ 1108 (1472)
|++
T Consensus 1433 g~p 1435 (1490)
T TIGR01271 1433 DSI 1435 (1490)
T ss_pred CCH
Confidence 875
No 33
>PRK10938 putative molybdenum transport ATP-binding protein ModF; Provisional
Probab=100.00 E-value=4.2e-59 Score=582.80 Aligned_cols=195 Identities=19% Similarity=0.225 Sum_probs=160.9
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCC--C--
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLH--H-- 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~--~-- 259 (1472)
++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.. +
T Consensus 17 ~il~~vsl~i~~Ge~~~liG~nGsGKSTLl~~l~G~~~p~---~G~i~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 93 (490)
T PRK10938 17 KTLQLPSLTLNAGDSWAFVGANGSGKSALARALAGELPLL---SGERQSQFSHITRLSFEQLQKLVSDEWQRNNTDMLSP 93 (490)
T ss_pred eecccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CceEEECCcccccCCHHHHHHHhceeccCcchhhccc
Confidence 5999999999999999999999999999999999999887 8999999977643321 2458999998542 1
Q ss_pred ----CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccc
Q 045902 260 ----GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADI 335 (1472)
Q Consensus 260 ----~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 335 (1472)
..+||+|++.+.. + . ...++.+++.+||++..|.
T Consensus 94 ~~~~~~~~~~~~~~~~~-------------~----~-------------------------~~~~~~~l~~~~l~~~~~~ 131 (490)
T PRK10938 94 GEDDTGRTTAEIIQDEV-------------K----D-------------------------PARCEQLAQQFGITALLDR 131 (490)
T ss_pred chhhccccHHHhcccch-------------h----H-------------------------HHHHHHHHHHcCCHhhhhC
Confidence 1467777764310 0 0 0013457889999888887
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
.+++ |||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|++ .++.+++|+
T Consensus 132 ~~~~-----LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tvii~tH~~-~~~~~~~d~ 204 (490)
T PRK10938 132 RFKY-----LSTGETRKTLLCQALMSEPDLLILDEPFDGLDVASRQQLAELLASLHQ-SGITLVLVLNRF-DEIPDFVQF 204 (490)
T ss_pred Cccc-----CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCCeEEEEeCCH-HHHHhhCCE
Confidence 7765 999999999999999999999999999999999999999999999976 478888887764 577789999
Q ss_pred EEEecCCeEEEecChhHH
Q 045902 416 IILLSEGEIVYQGPREYV 433 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~ 433 (1472)
|++|++|+++.+|+.+++
T Consensus 205 v~~l~~G~i~~~~~~~~~ 222 (490)
T PRK10938 205 AGVLADCTLAETGEREEI 222 (490)
T ss_pred EEEEECCEEEEeCCHHHH
Confidence 999999999999886554
No 34
>PRK11819 putative ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=2.1e-56 Score=564.76 Aligned_cols=199 Identities=21% Similarity=0.318 Sum_probs=161.2
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.+++ +
T Consensus 324 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~-~- 386 (556)
T PRK11819 324 VIEAENLSKSF-------------GDRLLIDDLSFSLPPGGIVGIIGPNGAGKSTLFKMITGQEQ--PDSGTIKIGE-T- 386 (556)
T ss_pred EEEEEeEEEEE-------------CCeeeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECC-c-
Confidence 47778877654 23469999999999999999999999999999999999876 3589999954 2
Q ss_pred ChhcccceeEEeccCC-CCCCCCCHHHHHHHHHHcCC-C-chHHHHHHHHHccccc-ccccccCCCCCCCCCHHHHHHHH
Q 045902 957 KQETFARISGYCEQND-IHSPNVTIYESLLYSAWLRL-P-KDMFVEEVMELVEMKA-LRNSLVGLPGVDGLSTEQRKRLT 1032 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~~~~~l~~-~-~~~~~~~v~~~l~l~~-~~~~~~~~~~~~~LSgGqrqRl~ 1032 (1472)
..+||++|+. .+++.+||.|++.+...... . .+...+++++.+++.+ ..+.. +..|||||||||+
T Consensus 387 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~ 455 (556)
T PRK11819 387 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIKVGNREIPSRAYVGRFNFKGGDQQKK-----VGVLSGGERNRLH 455 (556)
T ss_pred ------eEEEEEeCchhhcCCCCCHHHHHHhhcccccccccHHHHHHHHHhCCCChhHhcCc-----hhhCCHHHHHHHH
Confidence 1489999996 67788999999987643221 1 1233456778887753 33443 3479999999999
Q ss_pred HHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE-EEcC
Q 045902 1033 IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI-YAGP 1107 (1472)
Q Consensus 1033 iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~-~~g~ 1107 (1472)
||++|+.+|++|+|||||+|||+.++..+++.|+++. | |||++||+++ .+.+.||++++|++||++. +.|+
T Consensus 456 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~--~-tvi~vtHd~~-~~~~~~d~i~~l~~~g~~~~~~g~ 527 (556)
T PRK11819 456 LAKTLKQGGNVLLLDEPTNDLDVETLRALEEALLEFP--G-CAVVISHDRW-FLDRIATHILAFEGDSQVEWFEGN 527 (556)
T ss_pred HHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhCC--C-eEEEEECCHH-HHHHhCCEEEEEECCCeEEEecCC
Confidence 9999999999999999999999999999999999873 4 8999999976 4777899999998766765 5554
No 35
>COG4172 ABC-type uncharacterized transport system, duplicated ATPase component [General function prediction only]
Probab=100.00 E-value=1.1e-56 Score=502.19 Aligned_cols=465 Identities=23% Similarity=0.333 Sum_probs=349.5
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCeeCCCCCCC-------ceEEEEcC
Q 045902 184 RKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDK--SLRVSGRVTYCGHELTEFVPQ-------RTCAYISQ 254 (1472)
Q Consensus 184 ~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~~G~~~~~~~~~-------~~~~yv~Q 254 (1472)
....++++|||.+++||.++|+|.||||||-..+.+.|+++. ....+|+|.|+|+++-....+ ..|++|+|
T Consensus 21 ~~~~aVk~isf~i~~GEtlAlVGESGSGKSvTa~sim~LLp~~~~~~~sg~i~f~G~dll~~se~~lr~iRG~~I~MIFQ 100 (534)
T COG4172 21 GTVEAVKGISFDIEAGETLALVGESGSGKSVTALSILGLLPSPAAAHPSGSILFDGEDLLAASERQLRGVRGNKIGMIFQ 100 (534)
T ss_pred cceEeeccceeeecCCCEEEEEecCCCCccHHHHHHHHhcCCCcccCccceeEEcChhhhcCCHHHHhhhcccceEEEec
Confidence 456799999999999999999999999999999999999876 345689999999998655432 36999999
Q ss_pred CC--CCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccc
Q 045902 255 HD--LHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDIC 332 (1472)
Q Consensus 255 ~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 332 (1472)
++ .+.|-.|+...+.-..++... +++++. +..+-++|+..|+.+-
T Consensus 101 EPMtSLNPl~tIg~Qi~E~l~~Hrg---------~~~~~A------------------------r~r~lelL~~VgI~~p 147 (534)
T COG4172 101 EPMTSLNPLHTIGKQLAEVLRLHRG---------LSRAAA------------------------RARALELLELVGIPEP 147 (534)
T ss_pred ccccccCcHhHHHHHHHHHHHHHhc---------ccHHHH------------------------HHHHHHHHHHcCCCch
Confidence 97 566777888777655544211 111111 1123446777888765
Q ss_pred ccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhc
Q 045902 333 ADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDL 412 (1472)
Q Consensus 333 ~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~ 412 (1472)
...+ +.++..|||||||||.||.||+.+|++|+-||||++||.....+|.++|+++.+..|..+++..| ...-+-++
T Consensus 148 ~~rl--~~yPHeLSGGqRQRVMIAMALan~P~lLIADEPTTALDVtvQaQIL~Ll~~Lq~~~gMa~lfITH-DL~iVr~~ 224 (534)
T COG4172 148 EKRL--DAYPHELSGGQRQRVMIAMALANEPDLLIADEPTTALDVTVQAQILDLLKELQAELGMAILFITH-DLGIVRKF 224 (534)
T ss_pred hhhh--hhCCcccCcchhhHHHHHHHHcCCCCeEeecCCcchhhhhhHHHHHHHHHHHHHHhCcEEEEEec-cHHHHHHh
Confidence 4433 46778899999999999999999999999999999999999999999999999988888887654 56677889
Q ss_pred cCeEEEecCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhh
Q 045902 413 FDDIILLSEGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVG 492 (1472)
Q Consensus 413 fD~iilL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~ 492 (1472)
+|+|+||.+|+++++|+.+.+.. .|.+ ||.
T Consensus 225 ADrV~VM~~G~ivE~~~t~~lF~--------~PqH-------------------------pYT----------------- 254 (534)
T COG4172 225 ADRVYVMQHGEIVETGTTETLFA--------APQH-------------------------PYT----------------- 254 (534)
T ss_pred hhhEEEEeccEEeecCcHHHHhh--------CCCC-------------------------hHH-----------------
Confidence 99999999999999999876531 1110 000
Q ss_pred hhhhhhhcCCCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCcccc
Q 045902 493 QKLTDELRVPYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQL 572 (1472)
Q Consensus 493 ~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~ 572 (1472)
|.++.
T Consensus 255 ---------------------------------------r~Ll~------------------------------------ 259 (534)
T COG4172 255 ---------------------------------------RKLLA------------------------------------ 259 (534)
T ss_pred ---------------------------------------HHHHh------------------------------------
Confidence 00000
Q ss_pred ccccchhhHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCC
Q 045902 573 IDGGKFYGALFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAP 652 (1472)
Q Consensus 573 ~~~~~~~g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~ 652 (1472)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHH
Q 045902 653 SATRFFRQLLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAI 732 (1472)
Q Consensus 653 ~~~~ff~~~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al 732 (1472)
T Consensus 260 -------------------------------------------------------------------------------- 259 (534)
T COG4172 260 -------------------------------------------------------------------------------- 259 (534)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHhhcCCCCCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccc
Q 045902 733 VLNEFLDERWSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEH 812 (1472)
Q Consensus 733 ~~nef~~~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~ 812 (1472)
..|.
T Consensus 260 ------------aeP~---------------------------------------------------------------- 263 (534)
T COG4172 260 ------------AEPS---------------------------------------------------------------- 263 (534)
T ss_pred ------------cCCC----------------------------------------------------------------
Confidence 0000
Q ss_pred cCCCCcccccChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccch
Q 045902 813 NDGGKSKKQSNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAE 892 (1472)
Q Consensus 813 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 892 (1472)
....+. .+..++.+..+++...++.+..
T Consensus 264 ---------------------g~~~p~-------------------------------~~~~~~ll~~~~v~v~f~i~~g 291 (534)
T COG4172 264 ---------------------GDPPPL-------------------------------PEDAPVLLEVEDLRVWFPIKGG 291 (534)
T ss_pred ---------------------CCCCCC-------------------------------CCCCCceEEecceEEEEecCCc
Confidence 000000 0001123334444444333221
Q ss_pred hhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeE
Q 045902 893 MKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISG 966 (1472)
Q Consensus 893 ~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~g 966 (1472)
.-.. ..+...++++||++.++||.+||+|.||||||||=.+|.++.++ +|+|.++|.++.. ...++.+-
T Consensus 292 ~~~r--~~~~~~AVd~isl~L~~gqTlGlVGESGSGKsTlG~allrL~~s---~G~I~F~G~~i~~~~~~~mrplR~~mQ 366 (534)
T COG4172 292 FLRR--TVDHLRAVDGISLTLRRGQTLGLVGESGSGKSTLGLALLRLIPS---QGEIRFDGQDIDGLSRKEMRPLRRRMQ 366 (534)
T ss_pred cccc--cchheEEeccceeEecCCCeEEEEecCCCCcchHHHHHHhhcCc---CceEEECCccccccChhhhhhhhhhce
Confidence 1111 12346799999999999999999999999999999999998763 5999999998753 23567789
Q ss_pred EeccCC--CCCCCCCHHHHHHHHHHcCCC---c---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHh
Q 045902 967 YCEQND--IHSPNVTIYESLLYSAWLRLP---K---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELV 1038 (1472)
Q Consensus 967 yv~Q~~--~~~~~lTv~e~l~~~~~l~~~---~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~ 1038 (1472)
.|+||+ .+.|.+||.|-+.-+.....+ . ++++.++++.+||.. ++....| ..+|||||||++|||||+
T Consensus 367 vVFQDPygSLsPRmtV~qII~EGL~vh~~~ls~~eR~~rv~~aL~EVGLDp--~~r~RYP--hEFSGGQRQRIAIARAli 442 (534)
T COG4172 367 VVFQDPYGSLSPRMTVGQIIEEGLRVHEPKLSAAERDQRVIEALEEVGLDP--ATRNRYP--HEFSGGQRQRIAIARALI 442 (534)
T ss_pred EEEeCCCCCCCcccCHHHHhhhhhhhcCCCCCHHHHHHHHHHHHHHcCCCh--hHhhcCC--cccCcchhhHHHHHHHHh
Confidence 999998 477999999998776655432 2 245667777777764 3333344 579999999999999999
Q ss_pred hCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1039 ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1039 ~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
-+|++++||||||.||-.-+.+|+++|+++.++ |.+-++++||.. -+-.+||+++||++ |+|+..||.
T Consensus 443 LkP~~i~LDEPTSALD~SVQaQvv~LLr~LQ~k~~LsYLFISHDL~-VvrAl~~~viVm~~-GkiVE~G~~ 511 (534)
T COG4172 443 LKPELILLDEPTSALDRSVQAQVLDLLRDLQQKHGLSYLFISHDLA-VVRALCHRVIVMRD-GKIVEQGPT 511 (534)
T ss_pred cCCcEEEecCCchHhhHHHHHHHHHHHHHHHHHhCCeEEEEeccHH-HHHHhhceEEEEeC-CEEeeeCCH
Confidence 999999999999999999999999999999754 899999999975 35568999999985 899999985
No 36
>PRK15064 ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-56 Score=565.26 Aligned_cols=198 Identities=18% Similarity=0.266 Sum_probs=161.2
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 319 ~l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~i~G~~~--p~~G~i~~~~~-- 381 (530)
T PRK15064 319 ALEVENLTKGF-------------DNGPLFKNLNLLLEAGERLAIIGENGVGKTTLLRTLVGELE--PDSGTVKWSEN-- 381 (530)
T ss_pred eEEEEeeEEee-------------CCceeecCcEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCc--
Confidence 46778877654 23469999999999999999999999999999999999876 35899999873
Q ss_pred ChhcccceeEEeccCCC--CCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHH
Q 045902 957 KQETFARISGYCEQNDI--HSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTI 1033 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~i 1033 (1472)
+.+||++|+.. +.+.+|+.|++.+... ....+..++++++.+++. +..+.. +..||||||||++|
T Consensus 382 ------~~i~~~~q~~~~~~~~~~t~~~~~~~~~~-~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGq~qrv~l 449 (530)
T PRK15064 382 ------ANIGYYAQDHAYDFENDLTLFDWMSQWRQ-EGDDEQAVRGTLGRLLFSQDDIKKS-----VKVLSGGEKGRMLF 449 (530)
T ss_pred ------eEEEEEcccccccCCCCCcHHHHHHHhcc-CCccHHHHHHHHHHcCCChhHhcCc-----ccccCHHHHHHHHH
Confidence 45899999864 4567999999864211 111234567788888873 444544 34799999999999
Q ss_pred HHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE-EEcCC
Q 045902 1034 AVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI-YAGPL 1108 (1472)
Q Consensus 1034 A~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~-~~g~~ 1108 (1472)
|++|+.+|++|+|||||+|||+.++..+++.|+++ +.|||++||+++ .+.+.||++++|++ |+++ +.|+.
T Consensus 450 a~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vsHd~~-~~~~~~d~i~~l~~-g~i~~~~g~~ 520 (530)
T PRK15064 450 GKLMMQKPNVLVMDEPTNHMDMESIESLNMALEKY---EGTLIFVSHDRE-FVSSLATRIIEITP-DGVVDFSGTY 520 (530)
T ss_pred HHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHC---CCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEcCCCH
Confidence 99999999999999999999999999999999987 459999999976 46778999999986 5665 77764
No 37
>TIGR03719 ABC_ABC_ChvD ATP-binding cassette protein, ChvD family. Members of this protein family have two copies of the ABC transporter ATP-binding cassette, but are found outside the common ABC transporter operon structure that features integral membrane permease proteins and substrate-binding proteins encoded next to the ATP-binding cassette (ABC domain) protein. The member protein ChvD from Agrobacterium tumefaciens was identified as both a candidate to interact with VirB8, based on yeast two-hybrid analysis, and as an apparent regulator of VirG. The general function of this protein family is unknown.
Probab=100.00 E-value=1.3e-56 Score=566.79 Aligned_cols=199 Identities=21% Similarity=0.315 Sum_probs=160.3
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+|||++|++|+++||+||||||||||+++|+|..+ +.+|+|.+++.
T Consensus 322 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~--p~~G~i~~~~~-- 384 (552)
T TIGR03719 322 VIEAENLSKGF-------------GDKLLIDDLSFKLPPGGIVGVIGPNGAGKSTLFRMITGQEQ--PDSGTIKIGET-- 384 (552)
T ss_pred EEEEeeEEEEE-------------CCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCeEEEECCc--
Confidence 36677776654 23469999999999999999999999999999999999876 35899999542
Q ss_pred ChhcccceeEEeccCC-CCCCCCCHHHHHHHHHHcC-CC-chHHHHHHHHHccccc-ccccccCCCCCCCCCHHHHHHHH
Q 045902 957 KQETFARISGYCEQND-IHSPNVTIYESLLYSAWLR-LP-KDMFVEEVMELVEMKA-LRNSLVGLPGVDGLSTEQRKRLT 1032 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~~~~~l~-~~-~~~~~~~v~~~l~l~~-~~~~~~~~~~~~~LSgGqrqRl~ 1032 (1472)
..+||++|+. .+++.+||.|++.+..... .. .+...+++++.+++.+ ..+.. +..|||||||||+
T Consensus 385 ------~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGe~qrv~ 453 (552)
T TIGR03719 385 ------VKLAYVDQSRDALDPNKTVWEEISGGLDIIQLGKREVPSRAYVGRFNFKGSDQQKK-----VGQLSGGERNRVH 453 (552)
T ss_pred ------eEEEEEeCCccccCCCCcHHHHHHhhccccccCcchHHHHHHHHhCCCChhHhcCc-----hhhCCHHHHHHHH
Confidence 1489999986 4778899999998764322 11 1233456788888753 33443 3479999999999
Q ss_pred HHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE-EEcC
Q 045902 1033 IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI-YAGP 1107 (1472)
Q Consensus 1033 iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~-~~g~ 1107 (1472)
||++|+.+|++|+|||||+|||+.++..+++.|+++. .|||++||+++ .+.+.||++++|++||++. +.|+
T Consensus 454 la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~---~~viivsHd~~-~~~~~~d~i~~l~~~~~~~~~~g~ 525 (552)
T TIGR03719 454 LAKTLKSGGNVLLLDEPTNDLDVETLRALEEALLEFA---GCAVVISHDRW-FLDRIATHILAFEGDSHVEWFEGN 525 (552)
T ss_pred HHHHHhhCCCEEEEeCCCCCCCHHHHHHHHHHHHHCC---CeEEEEeCCHH-HHHHhCCEEEEEECCCeEEEeCCC
Confidence 9999999999999999999999999999999999883 48999999976 4677899999998766765 5554
No 38
>PRK13409 putative ATPase RIL; Provisional
Probab=100.00 E-value=7.1e-55 Score=548.11 Aligned_cols=197 Identities=22% Similarity=0.266 Sum_probs=162.6
Q ss_pred eeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHHHH
Q 045902 905 LLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYESL 984 (1472)
Q Consensus 905 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l 984 (1472)
.|+++|++|++||++||+||||||||||+++|+|..+ +.+|+|.++ ..++|++|+..+.+.+||+|++
T Consensus 354 ~l~~~s~~i~~Geiv~l~G~NGsGKSTLlk~L~Gl~~--p~~G~I~~~----------~~i~y~~Q~~~~~~~~tv~e~l 421 (590)
T PRK13409 354 SLEVEGGEIYEGEVIGIVGPNGIGKTTFAKLLAGVLK--PDEGEVDPE----------LKISYKPQYIKPDYDGTVEDLL 421 (590)
T ss_pred EEEecceEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEEe----------eeEEEecccccCCCCCcHHHHH
Confidence 4899999999999999999999999999999999876 358999885 1479999998888899999999
Q ss_pred HHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHH
Q 045902 985 LYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRT 1064 (1472)
Q Consensus 985 ~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~ 1064 (1472)
.+.... .......+++++.+++.+..++.+ ..|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.
T Consensus 422 ~~~~~~-~~~~~~~~~~L~~l~l~~~~~~~~-----~~LSGGe~QRvaiAraL~~~p~llLLDEPt~~LD~~~~~~l~~~ 495 (590)
T PRK13409 422 RSITDD-LGSSYYKSEIIKPLQLERLLDKNV-----KDLSGGELQRVAIAACLSRDADLYLLDEPSAHLDVEQRLAVAKA 495 (590)
T ss_pred HHHhhh-cChHHHHHHHHHHCCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHH
Confidence 875321 122345678899999887766654 47999999999999999999999999999999999999999999
Q ss_pred HHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCcc---hhHHHHHHHhC
Q 045902 1065 VRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGRQ---SHKLVEYFEAV 1122 (1472)
Q Consensus 1065 l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~~---~~~~~~~f~~~ 1122 (1472)
|++++++ |+|||+++||+. .+...+|++++|+ | ++...|..... ...+..++..+
T Consensus 496 l~~l~~~~g~tviivsHD~~-~~~~~aDrvivl~-~-~~~~~g~~~~~~~~~~~~~~~l~~~ 554 (590)
T PRK13409 496 IRRIAEEREATALVVDHDIY-MIDYISDRLMVFE-G-EPGKHGHASGPMDMREGMNRFLKEL 554 (590)
T ss_pred HHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEc-C-cceeeeecCCchhHHHHHHHHHHHc
Confidence 9999764 899999999976 4677899999996 3 66666654321 12344556665
No 39
>PRK11147 ABC transporter ATPase component; Reviewed
Probab=100.00 E-value=7.2e-53 Score=539.46 Aligned_cols=200 Identities=24% Similarity=0.338 Sum_probs=158.3
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+|+|++|++|+++||+|||||||||||++|+|..+ +.+|+|.+ |.+.
T Consensus 319 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~-~~~~ 382 (635)
T PRK11147 319 VFEMENVNYQI-------------DGKQLVKDFSAQVQRGDKIALIGPNGCGKTTLLKLMLGQLQ--ADSGRIHC-GTKL 382 (635)
T ss_pred eEEEeeeEEEE-------------CCeEEEcCcEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEE-CCCc
Confidence 46677776654 23569999999999999999999999999999999999876 35899998 4321
Q ss_pred ChhcccceeEEeccCC-CCCCCCCHHHHHHHHHHcCC-C-chHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHH
Q 045902 957 KQETFARISGYCEQND-IHSPNVTIYESLLYSAWLRL-P-KDMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLT 1032 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~~~~~l~~-~-~~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~ 1032 (1472)
.+||++|+. .+++.+||.|++.+...... . ....+.++++.+++. +..++. +..|||||||||+
T Consensus 383 -------~i~y~~q~~~~l~~~~tv~e~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgGekqRl~ 450 (635)
T PRK11147 383 -------EVAYFDQHRAELDPEKTVMDNLAEGKQEVMVNGRPRHVLGYLQDFLFHPKRAMTP-----VKALSGGERNRLL 450 (635)
T ss_pred -------EEEEEeCcccccCCCCCHHHHHHhhcccccccchHHHHHHHHHhcCCCHHHHhCh-----hhhCCHHHHHHHH
Confidence 489999975 57889999999987532111 1 123345566666664 233443 3479999999999
Q ss_pred HHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEe-cCcEEEEEcCC
Q 045902 1033 IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-RGGHVIYAGPL 1108 (1472)
Q Consensus 1033 iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~-~gg~v~~~g~~ 1108 (1472)
||++|+.+|++|||||||+|||+.+...+.+.|+++ +.|||++|||.. .+...||+++++. +|..+.|.|+.
T Consensus 451 la~al~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~---~~tvi~vSHd~~-~~~~~~d~i~~l~~~g~i~~~~g~y 523 (635)
T PRK11147 451 LARLFLKPSNLLILDEPTNDLDVETLELLEELLDSY---QGTVLLVSHDRQ-FVDNTVTECWIFEGNGKIGRYVGGY 523 (635)
T ss_pred HHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHhC---CCeEEEEECCHH-HHHHhcCEEEEEeCCCeEEEccCCH
Confidence 999999999999999999999999999999999886 459999999975 4667899999997 55555666654
No 40
>PRK10636 putative ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.7e-53 Score=541.80 Aligned_cols=197 Identities=21% Similarity=0.323 Sum_probs=156.7
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+|+|++|++|+++||+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 312 ~l~~~~l~~~y-------------~~~~il~~isl~i~~Ge~~~l~G~NGsGKSTLlk~l~G~~~--p~~G~i~~~~~-- 374 (638)
T PRK10636 312 LLKMEKVSAGY-------------GDRIILDSIKLNLVPGSRIGLLGRNGAGKSTLIKLLAGELA--PVSGEIGLAKG-- 374 (638)
T ss_pred eEEEEeeEEEe-------------CCeeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCC--
Confidence 46777877654 23569999999999999999999999999999999999876 45899999741
Q ss_pred ChhcccceeEEeccCC--CCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccc-ccccccCCCCCCCCCHHHHHHHHH
Q 045902 957 KQETFARISGYCEQND--IHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKA-LRNSLVGLPGVDGLSTEQRKRLTI 1033 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~-~~~~~~~~~~~~~LSgGqrqRl~i 1033 (1472)
..+||++|+. .+.+..|+.+++... ........+.++++.+++.. ..+..+ ..|||||||||+|
T Consensus 375 ------~~igy~~Q~~~~~l~~~~~~~~~~~~~--~~~~~~~~~~~~L~~~~l~~~~~~~~~-----~~LSgGekqRl~L 441 (638)
T PRK10636 375 ------IKLGYFAQHQLEFLRADESPLQHLARL--APQELEQKLRDYLGGFGFQGDKVTEET-----RRFSGGEKARLVL 441 (638)
T ss_pred ------EEEEEecCcchhhCCccchHHHHHHHh--CchhhHHHHHHHHHHcCCChhHhcCch-----hhCCHHHHHHHHH
Confidence 2589999974 345667888776321 01111245667777777742 344443 4799999999999
Q ss_pred HHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE-EEcCC
Q 045902 1034 AVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI-YAGPL 1108 (1472)
Q Consensus 1034 A~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~-~~g~~ 1108 (1472)
|++|+.+|++|+|||||+|||+.+...+.+.|+++ . .|||++|||+. .+...||++++|.+ |+++ +.|+.
T Consensus 442 a~~l~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~--~-gtvi~vSHd~~-~~~~~~d~i~~l~~-G~i~~~~g~~ 512 (638)
T PRK10636 442 ALIVWQRPNLLLLDEPTNHLDLDMRQALTEALIDF--E-GALVVVSHDRH-LLRSTTDDLYLVHD-GKVEPFDGDL 512 (638)
T ss_pred HHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CeEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEcCCCH
Confidence 99999999999999999999999999999999987 3 49999999976 47778999999986 6665 78875
No 41
>COG1129 MglA ABC-type sugar transport system, ATPase component [Carbohydrate transport and metabolism]
Probab=100.00 E-value=8e-52 Score=492.03 Aligned_cols=444 Identities=24% Similarity=0.362 Sum_probs=336.6
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCC----ceEEEEcCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQ----RTCAYISQHDLHHG 260 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 260 (1472)
..++|+|||+.++|||+++|+|.||||||||+|+|+|.++|+ +|+|.+||++..-..|+ ..|+.|.|+..+.|
T Consensus 20 gV~AL~~v~l~v~~GEV~aL~GeNGAGKSTLmKiLsGv~~p~---~G~I~~~G~~~~~~sp~~A~~~GI~~V~QEl~L~p 96 (500)
T COG1129 20 GVKALDGVSLTVRPGEVHALLGENGAGKSTLMKILSGVYPPD---SGEILIDGKPVAFSSPRDALAAGIATVHQELSLVP 96 (500)
T ss_pred CceeeccceeEEeCceEEEEecCCCCCHHHHHHHHhCcccCC---CceEEECCEEccCCCHHHHHhCCcEEEeechhccC
Confidence 457999999999999999999999999999999999999998 99999999998765553 46899999999999
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
+|||.|||-++....... .. +.++. | ......+|+.+|++...|+.|++
T Consensus 97 ~LsVaeNifLgre~~~~~---g~---id~~~--------------m----------~~~A~~~l~~lg~~~~~~~~v~~- 145 (500)
T COG1129 97 NLSVAENIFLGREPTRRF---GL---IDRKA--------------M----------RRRARELLARLGLDIDPDTLVGD- 145 (500)
T ss_pred CccHHHHhhcccccccCC---Cc---cCHHH--------------H----------HHHHHHHHHHcCCCCChhhhhhh-
Confidence 999999997654322100 00 00000 0 11235678999997668888887
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
||+||||-|.||||+..++++++|||||+.|+...+..+++.++++.. .|.++|... |..+|+++++|+|.||.
T Consensus 146 ----LsiaqrQ~VeIArAl~~~arllIlDEPTaaLt~~E~~~Lf~~ir~Lk~-~Gv~ii~IS-Hrl~Ei~~i~DritVlR 219 (500)
T COG1129 146 ----LSIAQRQMVEIARALSFDARVLILDEPTAALTVKETERLFDLIRRLKA-QGVAIIYIS-HRLDEVFEIADRITVLR 219 (500)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEc-CcHHHHHHhcCEEEEEe
Confidence 999999999999999999999999999999999999999999999975 678877755 57889999999999999
Q ss_pred CCeEEEecCh-hHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhh
Q 045902 421 EGEIVYQGPR-EYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDEL 499 (1472)
Q Consensus 421 ~G~iv~~G~~-~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~ 499 (1472)
+|+.+..++. .+.- .+++.+
T Consensus 220 DG~~v~~~~~~~~~~--------------------------------------------~~~lv~--------------- 240 (500)
T COG1129 220 DGRVVGTRPTAAETS--------------------------------------------EDELVR--------------- 240 (500)
T ss_pred CCEEeeecccccCCC--------------------------------------------HHHHHH---------------
Confidence 9999876652 2110 000000
Q ss_pred cCCCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchh
Q 045902 500 RVPYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFY 579 (1472)
Q Consensus 500 ~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~ 579 (1472)
T Consensus 241 -------------------------------------------------------------------------------- 240 (500)
T COG1129 241 -------------------------------------------------------------------------------- 240 (500)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHH
Q 045902 580 GALFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFR 659 (1472)
Q Consensus 580 g~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~ 659 (1472)
.|+|=
T Consensus 241 ------------------------------------------------------------------~MvGr--------- 245 (500)
T COG1129 241 ------------------------------------------------------------------LMVGR--------- 245 (500)
T ss_pred ------------------------------------------------------------------HhhCc---------
Confidence 00000
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcC
Q 045902 660 QLLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLD 739 (1472)
Q Consensus 660 ~~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~ 739 (1472)
++.
T Consensus 246 ----------------------------------------------------------------------------~~~- 248 (500)
T COG1129 246 ----------------------------------------------------------------------------ELE- 248 (500)
T ss_pred ----------------------------------------------------------------------------chh-
Confidence 000
Q ss_pred CCCCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCcc
Q 045902 740 ERWSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSK 819 (1472)
Q Consensus 740 ~~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~ 819 (1472)
..|.
T Consensus 249 ~~~~---------------------------------------------------------------------------- 252 (500)
T COG1129 249 DLFP---------------------------------------------------------------------------- 252 (500)
T ss_pred hhcc----------------------------------------------------------------------------
Confidence 0000
Q ss_pred cccChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhccccc
Q 045902 820 KQSNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIE 899 (1472)
Q Consensus 820 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 899 (1472)
. .+. . ...+..+++++++.
T Consensus 253 ---------------~-~~~---------------------~----------~~~~~~l~v~~l~~-------------- 271 (500)
T COG1129 253 ---------------E-PPE---------------------E----------GIGEPVLEVRNLSG-------------- 271 (500)
T ss_pred ---------------c-ccc---------------------c----------CCCCcEEEEecCCC--------------
Confidence 0 000 0 00011233444321
Q ss_pred cccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCC---
Q 045902 900 ENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQND--- 972 (1472)
Q Consensus 900 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~--- 972 (1472)
...++||||++++||++||-|-=|||+|-|+++|.|..+ ..+|+|.+||++... ...+.-++|||.|.
T Consensus 272 ---~~~~~dvSf~vr~GEIlGiaGLvGaGRTEl~~~lfG~~~--~~~G~i~l~G~~v~~~sp~~Ai~~Gi~~v~EDRk~~ 346 (500)
T COG1129 272 ---GGKVRDVSFTVRAGEILGIAGLVGAGRTELARALFGARP--ASSGEILLDGKPVRIRSPRDAIKAGIAYVPEDRKSE 346 (500)
T ss_pred ---CCceeCceeEEeCCcEEEEeccccCCHHHHHHHHhCCCc--CCCceEEECCEEccCCCHHHHHHcCCEeCCcccccC
Confidence 125789999999999999999999999999999999655 348999999998643 23445689999874
Q ss_pred CCCCCCCHHHHHHHHHHcCC------Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 045902 973 IHSPNVTIYESLLYSAWLRL------PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSI 1043 (1472)
Q Consensus 973 ~~~~~lTv~e~l~~~~~l~~------~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~i 1043 (1472)
.++..++|.||+.++...+. +.. ..+++..+.|++..-.- . ..+..||||.+|||.|||.|..+|+|
T Consensus 347 Gl~l~~sI~~Ni~l~~l~~~~~~~~i~~~~e~~~~~~~~~~l~Ik~~s~---~-~~v~~LSGGNQQKVvlarwL~~~p~v 422 (500)
T COG1129 347 GLVLDMSIAENITLASLRRFSRRGLIDRRKERALAERYIRRLRIKTPSP---E-QPIGTLSGGNQQKVVLARWLATDPKV 422 (500)
T ss_pred cCcCCCcHHHheehHhhhhhccccccChHHHHHHHHHHHHhcCcccCCc---c-chhhcCCchhhhhHHHHHHHhcCCCE
Confidence 57889999999987632221 111 34556666666542211 1 12458999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcC
Q 045902 1044 IFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGP 1107 (1472)
Q Consensus 1044 l~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~ 1107 (1472)
|+|||||.|+|.-+..+|.++|++++++|++||++|.+.. |+...||||++|.+ |+++..=+
T Consensus 423 LilDEPTRGIDVGAK~eIy~li~~lA~~G~ail~iSSElp-Ell~~~DRIlVm~~-Gri~~e~~ 484 (500)
T COG1129 423 LILDEPTRGIDVGAKAEIYRLIRELAAEGKAILMISSELP-ELLGLSDRILVMRE-GRIVGELD 484 (500)
T ss_pred EEECCCCcCcccchHHHHHHHHHHHHHCCCEEEEEeCChH-HHHhhCCEEEEEEC-CEEEEEec
Confidence 9999999999999999999999999999999999999975 78999999999985 67765333
No 42
>PLN03073 ABC transporter F family; Provisional
Probab=100.00 E-value=1.1e-50 Score=518.20 Aligned_cols=198 Identities=19% Similarity=0.268 Sum_probs=154.3
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.++ +++.+|+|+||+|++|++++|+|||||||||||++|+|..+ +.+|+|.+++.
T Consensus 508 ~L~~~~ls~~y~------------~~~~il~~vsl~i~~Ge~i~LvG~NGsGKSTLLk~L~Gll~--p~~G~I~~~~~-- 571 (718)
T PLN03073 508 IISFSDASFGYP------------GGPLLFKNLNFGIDLDSRIAMVGPNGIGKSTILKLISGELQ--PSSGTVFRSAK-- 571 (718)
T ss_pred eEEEEeeEEEeC------------CCCeeEeccEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCceEEECCc--
Confidence 467788876542 12469999999999999999999999999999999999876 35899998752
Q ss_pred ChhcccceeEEeccCCCCCCCCCHHHHHHHH--HHcCCCchHHHHHHHHHccccc-ccccccCCCCCCCCCHHHHHHHHH
Q 045902 957 KQETFARISGYCEQNDIHSPNVTIYESLLYS--AWLRLPKDMFVEEVMELVEMKA-LRNSLVGLPGVDGLSTEQRKRLTI 1033 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~--~~l~~~~~~~~~~v~~~l~l~~-~~~~~~~~~~~~~LSgGqrqRl~i 1033 (1472)
..+||++|+.. +.+++.++.... .......+..++++++.+++.+ ..+.. +..|||||||||+|
T Consensus 572 ------~~igyv~Q~~~--~~l~~~~~~~~~~~~~~~~~~~~~i~~~L~~~gl~~~~~~~~-----~~~LSgGqkqRvaL 638 (718)
T PLN03073 572 ------VRMAVFSQHHV--DGLDLSSNPLLYMMRCFPGVPEQKLRAHLGSFGVTGNLALQP-----MYTLSGGQKSRVAF 638 (718)
T ss_pred ------eeEEEEecccc--ccCCcchhHHHHHHHhcCCCCHHHHHHHHHHCCCChHHhcCC-----ccccCHHHHHHHHH
Confidence 35899999752 445565654321 1111222455677888888753 33433 35799999999999
Q ss_pred HHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE-EEcCC
Q 045902 1034 AVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI-YAGPL 1108 (1472)
Q Consensus 1034 A~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~-~~g~~ 1108 (1472)
|++|+.+|++|+|||||+|||+.+...+++.|++. . .|||++||++. .+...||++++|.+ |+++ +.|+.
T Consensus 639 AraL~~~p~lLLLDEPT~~LD~~s~~~l~~~L~~~--~-gtvIivSHd~~-~i~~~~drv~~l~~-G~i~~~~g~~ 709 (718)
T PLN03073 639 AKITFKKPHILLLDEPSNHLDLDAVEALIQGLVLF--Q-GGVLMVSHDEH-LISGSVDELWVVSE-GKVTPFHGTF 709 (718)
T ss_pred HHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHc--C-CEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCCH
Confidence 99999999999999999999999999998888765 3 49999999976 46778999999986 6776 77754
No 43
>COG0488 Uup ATPase components of ABC transporters with duplicated ATPase domains [General function prediction only]
Probab=100.00 E-value=4.5e-50 Score=490.96 Aligned_cols=223 Identities=25% Similarity=0.284 Sum_probs=173.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCH
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV 264 (1472)
.+++|+|+|+.+.+|+.++|+|+||||||||||+|+|...++ +|+|...+ .-.++|++|++...+..||
T Consensus 15 ~~~l~~~~~l~~~~G~riGLvG~NGaGKSTLLkilaG~~~~~---~G~i~~~~--------~~~v~~l~Q~~~~~~~~tv 83 (530)
T COG0488 15 DRPLLENVSLTLNPGERIGLVGRNGAGKSTLLKILAGELEPD---SGEVTRPK--------GLRVGYLSQEPPLDPEKTV 83 (530)
T ss_pred CceeecCCcceeCCCCEEEEECCCCCCHHHHHHHHcCCCcCC---CCeEeecC--------CceEEEeCCCCCcCCCccH
Confidence 457999999999999999999999999999999999999988 89998853 2369999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHH-HHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAF-MKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
.+.+.-+.. ...+...++........-......+.+ .....++++..+..++.++..||++.. ++.+++
T Consensus 84 ~~~v~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~e~~~~~~L~gLg~~~~-~~~~~~---- 153 (530)
T COG0488 84 LDYVIEGFG-----ELRELLAELEEAYALLADPDDELLAELEALLEELDGWTLEARAEEALLGLGFPDE-DRPVSS---- 153 (530)
T ss_pred HHHHHhhhH-----HHHHHHHHHHHHHHhcccchhHHHHHHHHHHHhhcccchHHHHHHHHhcCCCCcc-cCchhh----
Confidence 999976532 122222222222111100011122222 123345677777888999999999987 877776
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
||||||.||++|++|+.+|++|+|||||++||..+..++.+.|++. .| |+|++. |...-+-+.+++|+-++.|+
T Consensus 154 -LSGG~r~Rv~LA~aL~~~pDlLLLDEPTNHLD~~~i~WLe~~L~~~---~g-tviiVS-HDR~FLd~V~t~I~~ld~g~ 227 (530)
T COG0488 154 -LSGGWRRRVALARALLEEPDLLLLDEPTNHLDLESIEWLEDYLKRY---PG-TVIVVS-HDRYFLDNVATHILELDRGK 227 (530)
T ss_pred -cCHHHHHHHHHHHHHhcCCCEEEEcCCCcccCHHHHHHHHHHHHhC---CC-cEEEEe-CCHHHHHHHhhheEEecCCc
Confidence 9999999999999999999999999999999999999999999864 45 666654 56667778999999999998
Q ss_pred E-EEecChhHHH
Q 045902 424 I-VYQGPREYVL 434 (1472)
Q Consensus 424 i-v~~G~~~~~~ 434 (1472)
+ .|.|.++...
T Consensus 228 l~~y~Gny~~~~ 239 (530)
T COG0488 228 LTPYKGNYSSYL 239 (530)
T ss_pred eeEecCCHHHHH
Confidence 7 4778776544
No 44
>COG3845 ABC-type uncharacterized transport systems, ATPase components [General function prediction only]
Probab=100.00 E-value=1.5e-48 Score=452.78 Aligned_cols=451 Identities=22% Similarity=0.314 Sum_probs=344.8
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCC----ceEEEEcCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQ----RTCAYISQHDLHHG 260 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~ 260 (1472)
...+++|||+.+++||+.+|+|.||||||||+++|.|.+.|+ +|+|.++|+++.-..|+ ..||+|.||..+++
T Consensus 16 ~~~And~V~l~v~~GeIHaLLGENGAGKSTLm~iL~G~~~P~---~GeI~v~G~~v~~~sP~dA~~~GIGMVhQHF~Lv~ 92 (501)
T COG3845 16 GVVANDDVSLSVKKGEIHALLGENGAGKSTLMKILFGLYQPD---SGEIRVDGKEVRIKSPRDAIRLGIGMVHQHFMLVP 92 (501)
T ss_pred CEEecCceeeeecCCcEEEEeccCCCCHHHHHHHHhCcccCC---cceEEECCEEeccCCHHHHHHcCCcEEeecccccc
Confidence 467999999999999999999999999999999999999998 99999999998766654 46999999999999
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
++||.||+..+..-... .+ +..+. ....++.+.+.+||+--.|.+|++
T Consensus 93 ~lTV~ENiiLg~e~~~~-~~------~~~~~------------------------~~~~i~~l~~~yGl~vdp~~~V~d- 140 (501)
T COG3845 93 TLTVAENIILGLEPSKG-GL------IDRRQ------------------------ARARIKELSERYGLPVDPDAKVAD- 140 (501)
T ss_pred ccchhhhhhhcCccccc-cc------cCHHH------------------------HHHHHHHHHHHhCCCCCccceeec-
Confidence 99999999887542100 00 00000 011246688999999999999987
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
||=||||||.|-++|+.+|++|+|||||+-|-+....++++.|+++++ .|+|||+.. |-..|+.+++|++.||.
T Consensus 141 ----LsVG~qQRVEIlKaLyr~a~iLILDEPTaVLTP~E~~~lf~~l~~l~~-~G~tIi~IT-HKL~Ev~~iaDrvTVLR 214 (501)
T COG3845 141 ----LSVGEQQRVEILKALYRGARLLILDEPTAVLTPQEADELFEILRRLAA-EGKTIIFIT-HKLKEVMAIADRVTVLR 214 (501)
T ss_pred ----CCcchhHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEe-ccHHHHHHhhCeeEEEe
Confidence 999999999999999999999999999999999999999999999987 688888765 56789999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhCcccchhhhcccCCCCcCCChhHHHHHHHhchhhhhhhhhhc
Q 045902 421 EGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTSRKDQQQYWCKKNEPYRYVSVPEFVEHFKTFHVGQKLTDELR 500 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s~~~~~~~~~~~~~~~~~~s~~e~~~~f~~s~~~~~l~~~~~ 500 (1472)
.|+++-.-++ . + ..+.+++++.
T Consensus 215 ~Gkvvgt~~~--~--------------~---------------------------~~t~~ela~l--------------- 236 (501)
T COG3845 215 RGKVVGTVDP--V--------------A---------------------------ETTEEELAEL--------------- 236 (501)
T ss_pred CCeEEeeecC--C--------------C---------------------------CCCHHHHHHH---------------
Confidence 9998643220 0 0 0000000000
Q ss_pred CCCCCCCCCCCCCCcCcccccHHHHHHHHHHHHHHHHhhChHHHHHHHHHHHHHHHHhhheeeeccCCccccccccchhh
Q 045902 501 VPYDKSKTHPAGLVKKRYGISNWELFKTCFAREWLLMKRNSFVYVFKTFQITIMSIIAFTVYLRTQMTYGQLIDGGKFYG 580 (1472)
Q Consensus 501 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~R~~~~~~R~~~~~~~~~~~~~i~ali~g~lf~~~~~~~~~~~~~~~~~g 580 (1472)
T Consensus 237 -------------------------------------------------------------------------------- 236 (501)
T COG3845 237 -------------------------------------------------------------------------------- 236 (501)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhHHHHHhhcCCCcchhhHHHHHHHHHhhHHHHHHHHHHhhhhhccCCCCCHHHHHHH
Q 045902 581 ALFFSLVNVMFNGMAELALTIVRLPAFYKQRDFLFFPAWAFALPIWVLRIPLSLMESSIWILLTYYTIGFAPSATRFFRQ 660 (1472)
Q Consensus 581 ~lff~l~~~~~~~~~~~~~~~~~~~vf~kqr~~~~y~~~ay~la~~i~~iP~~~~~~~i~~~i~Y~~~gl~~~~~~ff~~ 660 (1472)
|+|
T Consensus 237 ------------------------------------------------------------------MvG----------- 239 (501)
T COG3845 237 ------------------------------------------------------------------MVG----------- 239 (501)
T ss_pred ------------------------------------------------------------------hcC-----------
Confidence 000
Q ss_pred HHHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHhheeeeccCCCchhhHHHHhhcHHHHHHHHHHHHhhcCC
Q 045902 661 LLAFFSVHQMGLSLFRFIAAVSRTQVVANTLGTFTLLLVFVLGGFIVAKDDIKPWMIWGYYVSPMSYGQNAIVLNEFLDE 740 (1472)
Q Consensus 661 ~l~~~~~~~~~~sl~r~iaa~~~~~~~a~~~~~~~~l~~~l~~Gfii~~~~ip~w~~W~~~ispl~Y~~~al~~nef~~~ 740 (1472)
.
T Consensus 240 -------------------------------------------------------------------------------~ 240 (501)
T COG3845 240 -------------------------------------------------------------------------------R 240 (501)
T ss_pred -------------------------------------------------------------------------------C
Confidence 0
Q ss_pred CCCCCCCCCcccCCcchHHHHHhhcCCcccchhHHHHHHHHHHHHHHHHHHHHHHHHhcCCCcCcccccccccCCCCccc
Q 045902 741 RWSAPNPARFLVDEPTVGKALLKARGMYTEDHMFWICIVALLGFSLFFNLCFIAALTYLDPFKETKSVMMEHNDGGKSKK 820 (1472)
Q Consensus 741 ~~~~~~~~~~~~~~~~~G~~~L~~~~~~~~~~~~w~~i~~l~g~~v~f~i~~~~aL~~~~~~~~~~~~~~~~~~~~~~~~ 820 (1472)
. ....
T Consensus 241 ~---v~~~------------------------------------------------------------------------ 245 (501)
T COG3845 241 E---VVLR------------------------------------------------------------------------ 245 (501)
T ss_pred c---cccc------------------------------------------------------------------------
Confidence 0 0000
Q ss_pred ccChhhhhhhcccCCCCCCCCCcccccccccccCCCCCccccccCCCCccccccceEEEEeceeeEEeccchhhcccccc
Q 045902 821 QSNSHAQQNMRAADMSPPSTAPLFEGIDMAVMNTPDNSIIGATSTRKGMVLPFQPLSLAFDHVNYFVDMPAEMKSQGIEE 900 (1472)
Q Consensus 821 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 900 (1472)
. . ..+. .. .+..+.++|++..-+
T Consensus 246 ---~---------~-~~~~--------------------------~p------g~~vL~V~~L~v~~~------------ 268 (501)
T COG3845 246 ---V---------V-KPPS--------------------------TP------GEVVLEVEDLSVKDR------------ 268 (501)
T ss_pred ---c---------c-cCCC--------------------------CC------CCeEEEEeeeEeecC------------
Confidence 0 0 0000 00 023456666654321
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC----Ch-hcccceeEEeccCCC--
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK----KQ-ETFARISGYCEQNDI-- 973 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~----~~-~~~~~~~gyv~Q~~~-- 973 (1472)
.....+++|||+|++||++||.|..|-|.+.|+.+|+|..++ .+|+|.++|++. +. +..+.-++|||+|..
T Consensus 269 ~~~~~v~~vs~~Vr~GEIvGIAGV~GNGQ~eL~eaisGlr~~--~~G~I~l~G~~v~~~~~~~~~r~~G~~~VPedR~~~ 346 (501)
T COG3845 269 RGVTAVKDVSFEVRAGEIVGIAGVAGNGQSELVEAISGLRKP--ASGRILLNGKDVLGRLSPRERRRLGLAYVPEDRHGH 346 (501)
T ss_pred CCCceeeeeeeEEecCcEEEEEecCCCCHHHHHHHHhCCCcc--CCceEEECCEeccccCCHHHHHhcCCccCChhhccC
Confidence 124689999999999999999999999999999999998753 359999999985 22 223346899999873
Q ss_pred -CCCCCCHHHHHHHHHHcC--------CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCC
Q 045902 974 -HSPNVTIYESLLYSAWLR--------LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANP 1041 (1472)
Q Consensus 974 -~~~~lTv~e~l~~~~~l~--------~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p 1041 (1472)
+.+.+|+.||+.+...-+ ...+ ...+++++.++...... ....+.||||++||+-+||+|..+|
T Consensus 347 Glv~~~sl~eN~vL~~~~~~~~~~~g~l~~~~i~~~a~~li~~fdVr~~~~----~~~a~~LSGGNqQK~IlaREl~~~p 422 (501)
T COG3845 347 GLVLDLSLAENLVLGRHDKKPFSRGGFLDRRAIRKFARELIEEFDVRAPSP----DAPARSLSGGNQQKLILARELARRP 422 (501)
T ss_pred ccccCccHHHHhhhhhccccccccccccCHHHHHHHHHHHHHHcCccCCCC----CcchhhcCCcceehhhhhhhhccCC
Confidence 468999999997654321 1111 34556666665542111 1124689999999999999999999
Q ss_pred CCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1042 SIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1042 ~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
++|+..+||.|||..+.+.|.+.|.+.++.|++|++++-+.+ ++++.+||+.+|.+ |+++...+..+
T Consensus 423 ~lLI~~qPTrGLDvgA~~~I~~~l~e~r~~G~AVLLiS~dLD-Eil~lsDrIaVi~~-Gri~~~~~~~~ 489 (501)
T COG3845 423 DLLIAAQPTRGLDVGAIEFIHERLLELRDAGKAVLLISEDLD-EILELSDRIAVIYE-GRIVGIVPPEE 489 (501)
T ss_pred CEEEEcCCCccccHHHHHHHHHHHHHHHhcCCEEEEEehhHH-HHHHhhheeeeeeC-Cceeccccccc
Confidence 999999999999999999999999999999999999999987 79999999999985 78887776643
No 45
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-43 Score=370.84 Aligned_cols=203 Identities=28% Similarity=0.417 Sum_probs=173.9
Q ss_pred cccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC----hhcccceeEEeccCCCCC
Q 045902 900 ENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK----QETFARISGYCEQNDIHS 975 (1472)
Q Consensus 900 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~----~~~~~~~~gyv~Q~~~~~ 975 (1472)
++...+|+|||++|++||+++|+|||||||||||+||.++.+ +.+|+|.++|.+.. -...|+.+|+|+|+..+|
T Consensus 12 fg~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~--~~~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLF 89 (240)
T COG1126 12 FGDKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEE--PDSGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLF 89 (240)
T ss_pred eCCeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcC--CCCceEEECCEeccchhhHHHHHHhcCeeccccccc
Confidence 456789999999999999999999999999999999999877 45899999997542 235678899999999999
Q ss_pred CCCCHHHHHHHHHH--cCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 976 PNVTIYESLLYSAW--LRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 976 ~~lTv~e~l~~~~~--l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
|++||.||+..+-. .+.++++..+.++++|+..++.|+....| ..|||||||||+|||||+.+|+++++|||||+|
T Consensus 90 PHlTvleNv~lap~~v~~~~k~eA~~~A~~lL~~VGL~~ka~~yP--~qLSGGQqQRVAIARALaM~P~vmLFDEPTSAL 167 (240)
T COG1126 90 PHLTVLENVTLAPVKVKKLSKAEAREKALELLEKVGLADKADAYP--AQLSGGQQQRVAIARALAMDPKVMLFDEPTSAL 167 (240)
T ss_pred ccchHHHHHHhhhHHHcCCCHHHHHHHHHHHHHHcCchhhhhhCc--cccCcHHHHHHHHHHHHcCCCCEEeecCCcccC
Confidence 99999999988643 23455555555666665555555544444 489999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1054 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+...++.+.+++++++|.|.||+||+... .-+.+||++.|++ |+++..|++
T Consensus 168 DPElv~EVL~vm~~LA~eGmTMivVTHEM~F-Ar~VadrviFmd~-G~iie~g~p 220 (240)
T COG1126 168 DPELVGEVLDVMKDLAEEGMTMIIVTHEMGF-AREVADRVIFMDQ-GKIIEEGPP 220 (240)
T ss_pred CHHHHHHHHHHHHHHHHcCCeEEEEechhHH-HHHhhheEEEeeC-CEEEEecCH
Confidence 9999999999999999999999999999874 6678999999985 788888875
No 46
>COG1126 GlnQ ABC-type polar amino acid transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.2e-41 Score=357.52 Aligned_cols=221 Identities=27% Similarity=0.421 Sum_probs=183.9
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCC----CCCceEEEEcCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEF----VPQRTCAYISQHDLHHG 260 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~----~~~~~~~yv~Q~d~~~~ 260 (1472)
..++|+|||+.|++||+++|+|||||||||||++|.|+-.++ +|+|.++|+++... ..++.+|+|+|+..+||
T Consensus 14 ~~~VLkgi~l~v~~Gevv~iiGpSGSGKSTlLRclN~LE~~~---~G~I~i~g~~~~~~~~~~~~R~~vGmVFQ~fnLFP 90 (240)
T COG1126 14 DKEVLKGISLSVEKGEVVVIIGPSGSGKSTLLRCLNGLEEPD---SGSITVDGEDVGDKKDILKLRRKVGMVFQQFNLFP 90 (240)
T ss_pred CeEEecCcceeEcCCCEEEEECCCCCCHHHHHHHHHCCcCCC---CceEEECCEeccchhhHHHHHHhcCeecccccccc
Confidence 467999999999999999999999999999999999999988 99999999876432 23578999999999999
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
++||.||+..+...- ...++.+. +.....+|+.+||.+.+|.+.
T Consensus 91 HlTvleNv~lap~~v---------~~~~k~eA------------------------~~~A~~lL~~VGL~~ka~~yP--- 134 (240)
T COG1126 91 HLTVLENVTLAPVKV---------KKLSKAEA------------------------REKALELLEKVGLADKADAYP--- 134 (240)
T ss_pred cchHHHHHHhhhHHH---------cCCCHHHH------------------------HHHHHHHHHHcCchhhhhhCc---
Confidence 999999998864311 01111111 011345789999999998655
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
..|||||||||+|||||+-+|+++++|||||+|||....++.+.++++++ .|.|+++.+|. ..-..+.+|||+.|+
T Consensus 135 --~qLSGGQqQRVAIARALaM~P~vmLFDEPTSALDPElv~EVL~vm~~LA~-eGmTMivVTHE-M~FAr~VadrviFmd 210 (240)
T COG1126 135 --AQLSGGQQQRVAIARALAMDPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EGMTMIIVTHE-MGFAREVADRVIFMD 210 (240)
T ss_pred --cccCcHHHHHHHHHHHHcCCCCEEeecCCcccCCHHHHHHHHHHHHHHHH-cCCeEEEEech-hHHHHHhhheEEEee
Confidence 45999999999999999999999999999999999999999999999998 58999998765 457778999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHH
Q 045902 421 EGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQE 456 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~e 456 (1472)
+|+++.+|+++++ |..|.+.-..+|+..
T Consensus 211 ~G~iie~g~p~~~--------f~~p~~~R~~~FL~~ 238 (240)
T COG1126 211 QGKIIEEGPPEEF--------FDNPKSERTRQFLSK 238 (240)
T ss_pred CCEEEEecCHHHH--------hcCCCCHHHHHHHHh
Confidence 9999999998876 345655556666654
No 47
>KOG0927 consensus Predicted transporter (ABC superfamily) [General function prediction only]
Probab=100.00 E-value=2.7e-40 Score=384.14 Aligned_cols=201 Identities=18% Similarity=0.234 Sum_probs=151.0
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+.+.++ ++..++++++|-|.+++.+|+|||||+|||||||++.|... +..|.|.-.-+.
T Consensus 389 vi~~~nv~F~y~------------~~~~iy~~l~fgid~~srvAlVGPNG~GKsTLlKl~~gdl~--p~~G~vs~~~H~- 453 (614)
T KOG0927|consen 389 VIMVQNVSFGYS------------DNPMIYKKLNFGIDLDSRVALVGPNGAGKSTLLKLITGDLQ--PTIGMVSRHSHN- 453 (614)
T ss_pred eEEEeccccCCC------------CcchhhhhhhcccCcccceeEecCCCCchhhhHHHHhhccc--cccccccccccc-
Confidence 466777766543 22368999999999999999999999999999999999877 357877654332
Q ss_pred ChhcccceeEEeccCC--CCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHH
Q 045902 957 KQETFARISGYCEQND--IHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIA 1034 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA 1034 (1472)
.+++..|.. .+.-+.++.|++.-.. -+....+.+..++..+||.+-.+.. ..+.||+|||+||..|
T Consensus 454 -------~~~~y~Qh~~e~ldl~~s~le~~~~~~-~~~~~~e~~r~ilgrfgLtgd~q~~----p~~~LS~Gqr~rVlFa 521 (614)
T KOG0927|consen 454 -------KLPRYNQHLAEQLDLDKSSLEFMMPKF-PDEKELEEMRSILGRFGLTGDAQVV----PMSQLSDGQRRRVLFA 521 (614)
T ss_pred -------cchhhhhhhHhhcCcchhHHHHHHHhc-cccchHHHHHHHHHHhCCCcccccc----chhhcccccchhHHHH
Confidence 223334432 2233556667664221 1112234555667777776433322 2468999999999999
Q ss_pred HHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1035 VELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1035 ~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+.++..|.+|+|||||+|||..+...+.+.|.+. ..+||+++||... +-+.++++.+..+++...+.|..
T Consensus 522 ~l~~kqP~lLlLDEPtnhLDi~tid~laeaiNe~---~Ggvv~vSHDfrl-I~qVaeEi~~c~~~~~~~~~G~i 591 (614)
T KOG0927|consen 522 RLAVKQPHLLLLDEPTNHLDIETIDALAEAINEF---PGGVVLVSHDFRL-ISQVAEEIWVCENGTVTKWDGDI 591 (614)
T ss_pred HHHhcCCcEEEecCCCcCCCchhHHHHHHHHhcc---CCceeeeechhhH-HHHHHHHhHhhccCceeecCccH
Confidence 9999999999999999999999999999998876 4689999999764 77789999999998889999975
No 48
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=3.5e-41 Score=390.48 Aligned_cols=198 Identities=31% Similarity=0.471 Sum_probs=179.1
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
++.+|+||||+|++||++||+||||||||||||+|+|...+ .+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p--~~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~lT 94 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKP--TSGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPELT 94 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCC--CceEEEEcCEeCccCHHHHHhheEEEccCCCCCcccc
Confidence 47899999999999999999999999999999999999874 58999999988654 456788999999999999999
Q ss_pred HHHHHHHHHHcCCCc----hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 045902 980 IYESLLYSAWLRLPK----DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1055 (1472)
Q Consensus 980 v~e~l~~~~~l~~~~----~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~ 1055 (1472)
|+|+|.|.+.++... .+.++++++.++|.+.+++. +++||+||||||+||+||+++|++|||||||+||||
T Consensus 95 ~~e~l~~~~~l~~~~~~~~~~~~~~~l~~~~L~~~~~~~-----~~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp 169 (293)
T COG1131 95 VRENLEFFARLYGLSKEEAEERIEELLELFGLEDKANKK-----VRTLSGGMKQRLSIALALLHDPELLILDEPTSGLDP 169 (293)
T ss_pred HHHHHHHHHHHhCCChhHHHHHHHHHHHHcCCchhhCcc-----hhhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCH
Confidence 999999999998754 35788999999998855444 357999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCC-CEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1056 RAAAIVMRTVRNTVDTG-RTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1056 ~~~~~i~~~l~~l~~~g-~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
.++..+++.|++++++| +||++|||+++ ++...||++++|++ |++++.|+.
T Consensus 170 ~~~~~~~~~l~~l~~~g~~tvlissH~l~-e~~~~~d~v~il~~-G~~~~~g~~ 221 (293)
T COG1131 170 ESRREIWELLRELAKEGGVTILLSTHILE-EAEELCDRVIILND-GKIIAEGTP 221 (293)
T ss_pred HHHHHHHHHHHHHHhCCCcEEEEeCCcHH-HHHHhCCEEEEEeC-CEEEEeCCH
Confidence 99999999999999887 89999999987 67788999999985 799999975
No 49
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.7e-40 Score=365.57 Aligned_cols=225 Identities=27% Similarity=0.357 Sum_probs=194.3
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCC
Q 045902 184 RKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDL 257 (1472)
Q Consensus 184 ~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~ 257 (1472)
...++|+|||+.|++||+.+|+|+||||||||++++.++-.|+ +|+|.++|+++..... ++.+|+|+||..
T Consensus 17 ~~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~Pt---sG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFn 93 (339)
T COG1135 17 GTVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLERPT---SGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFN 93 (339)
T ss_pred CceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCCCC---CceEEEcCEecccCChHHHHHHHhhccEEecccc
Confidence 4567999999999999999999999999999999999999998 9999999998877643 478999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMV 337 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 337 (1472)
++...||.||+.|..+..+.. +.+. +..+.++++..||++.+|.+.
T Consensus 94 LLssrTV~~NvA~PLeiag~~----------k~ei------------------------~~RV~elLelVgL~dk~~~yP 139 (339)
T COG1135 94 LLSSRTVFENVAFPLELAGVP----------KAEI------------------------KQRVAELLELVGLSDKADRYP 139 (339)
T ss_pred ccccchHHhhhhhhHhhcCCC----------HHHH------------------------HHHHHHHHHHcCChhhhccCc
Confidence 999999999999988766531 1111 113567899999999988665
Q ss_pred cCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEE
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDII 417 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ii 417 (1472)
. .|||||||||+|||||+.+|+||++|||||+|||.|+..|.+.|+++.+..|.|+++..|+. +-+-+.||||.
T Consensus 140 ~-----qLSGGQKQRVaIARALa~~P~iLL~DEaTSALDP~TT~sIL~LL~~In~~lglTIvlITHEm-~Vvk~ic~rVa 213 (339)
T COG1135 140 A-----QLSGGQKQRVAIARALANNPKILLCDEATSALDPETTQSILELLKDINRELGLTIVLITHEM-EVVKRICDRVA 213 (339)
T ss_pred h-----hcCcchhhHHHHHHHHhcCCCEEEecCccccCChHHHHHHHHHHHHHHHHcCCEEEEEechH-HHHHHHhhhhe
Confidence 5 59999999999999999999999999999999999999999999999999999999988774 47778999999
Q ss_pred EecCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHhhC
Q 045902 418 LLSEGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEVTS 459 (1472)
Q Consensus 418 lL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev~s 459 (1472)
+|++|+++++|+..++ |..|.+.-+-.|+.+...
T Consensus 214 vm~~G~lvE~G~v~~v--------F~~Pk~~~t~~fi~~~~~ 247 (339)
T COG1135 214 VLDQGRLVEEGTVSEV--------FANPKHAITQEFIGETLE 247 (339)
T ss_pred EeeCCEEEEeccHHHh--------hcCcchHHHHHHHHhhcc
Confidence 9999999999999887 345666656666665543
No 50
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=1.5e-40 Score=368.63 Aligned_cols=210 Identities=29% Similarity=0.446 Sum_probs=182.8
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+..+|+++.+ +++.+|+|+||++++||+++|+||||||||||||+|+|..+ +.+|+|.++|+++.
T Consensus 3 L~~~~ls~~y-------------~~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~--p~~G~V~l~g~~i~ 67 (258)
T COG1120 3 LEVENLSFGY-------------GGKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLK--PKSGEVLLDGKDIA 67 (258)
T ss_pred eEEEEEEEEE-------------CCeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCC--CCCCEEEECCCchh
Confidence 4566666654 46789999999999999999999999999999999999877 45899999999864
Q ss_pred ---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcC-----CCch---HHHHHHHHHcccccccccccCCCCCCCCCHH
Q 045902 958 ---QETFARISGYCEQNDIHSPNVTIYESLLYSAWLR-----LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 958 ---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-----~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgG 1026 (1472)
.+.+++.++|+||.....+.+||+|.+.++..-. ...+ +.++++++.+++.+++++.+ ..||||
T Consensus 68 ~~~~kelAk~ia~vpQ~~~~~~~~tV~d~V~~GR~p~~~~~~~~~~~D~~~v~~aL~~~~~~~la~r~~-----~~LSGG 142 (258)
T COG1120 68 SLSPKELAKKLAYVPQSPSAPFGLTVYELVLLGRYPHLGLFGRPSKEDEEIVEEALELLGLEHLADRPV-----DELSGG 142 (258)
T ss_pred hcCHHHHhhhEEEeccCCCCCCCcEEeehHhhcCCcccccccCCCHhHHHHHHHHHHHhCcHHHhcCcc-----cccChh
Confidence 3567889999999998889999999998764321 1111 35788899999999999875 479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
||||+.|||||+++|+||+||||||.||...+.+++++++++++ +|+|||+++||++. ...+||++++|++ |+++..
T Consensus 143 erQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDlN~-A~ryad~~i~lk~-G~i~a~ 220 (258)
T COG1120 143 ERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDLNL-AARYADHLILLKD-GKIVAQ 220 (258)
T ss_pred HHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-HHHhCCEEEEEEC-CeEEee
Confidence 99999999999999999999999999999999999999999984 59999999999985 7789999999985 789999
Q ss_pred cCCC
Q 045902 1106 GPLG 1109 (1472)
Q Consensus 1106 g~~~ 1109 (1472)
|++.
T Consensus 221 G~p~ 224 (258)
T COG1120 221 GTPE 224 (258)
T ss_pred cCcc
Confidence 9864
No 51
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-40 Score=363.71 Aligned_cols=211 Identities=27% Similarity=0.439 Sum_probs=181.1
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.++++|+++.++ +.++|+|||++|++|++++|+||||||||||+|+|+|..+ +.+|+|.++|.+.
T Consensus 4 ~i~v~nl~v~y~-------------~~~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~--p~~G~i~~~g~~~ 68 (254)
T COG1121 4 MIEVENLTVSYG-------------NRPVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLK--PSSGEIKIFGKPV 68 (254)
T ss_pred EEEEeeeEEEEC-------------CEeeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCc--CCcceEEEccccc
Confidence 467888877652 2269999999999999999999999999999999999877 4589999999986
Q ss_pred ChhcccceeEEeccCCCC--CCCCCHHHHHHHHHHcC-----CC---chHHHHHHHHHcccccccccccCCCCCCCCCHH
Q 045902 957 KQETFARISGYCEQNDIH--SPNVTIYESLLYSAWLR-----LP---KDMFVEEVMELVEMKALRNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~~~--~~~lTv~e~l~~~~~l~-----~~---~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgG 1026 (1472)
....-+..+|||||...+ ...+||+|.+..+...+ .+ ..+.++++++.+|+.+++|+.+| .||||
T Consensus 69 ~~~~~~~~IgYVPQ~~~~d~~fP~tV~d~V~~g~~~~~g~~~~~~~~d~~~v~~aL~~Vgm~~~~~r~i~-----~LSGG 143 (254)
T COG1121 69 RKRRKRLRIGYVPQKSSVDRSFPITVKDVVLLGRYGKKGWFRRLNKKDKEKVDEALERVGMEDLRDRQIG-----ELSGG 143 (254)
T ss_pred cccccCCeEEEcCcccccCCCCCcCHHHHHHccCcccccccccccHHHHHHHHHHHHHcCchhhhCCccc-----ccCcH
Confidence 554445689999996532 24589999998763322 11 12678999999999999999876 69999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
|+|||.|||||+.+|++|+|||||+|+|+.++..+.++|++++++|+||++++||++ .+.+.||+++.|. +++++.|
T Consensus 144 Q~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~eg~tIl~vtHDL~-~v~~~~D~vi~Ln--~~~~~~G 220 (254)
T COG1121 144 QKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQEGKTVLMVTHDLG-LVMAYFDRVICLN--RHLIASG 220 (254)
T ss_pred HHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEeCCcH-HhHhhCCEEEEEc--CeeEecc
Confidence 999999999999999999999999999999999999999999988999999999998 4889999999996 4788999
Q ss_pred CCCc
Q 045902 1107 PLGR 1110 (1472)
Q Consensus 1107 ~~~~ 1110 (1472)
+..+
T Consensus 221 ~~~~ 224 (254)
T COG1121 221 PPEE 224 (254)
T ss_pred Chhh
Confidence 8754
No 52
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.4e-40 Score=354.68 Aligned_cols=230 Identities=25% Similarity=0.372 Sum_probs=188.0
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.+++++.. ++++.+++|||++|++||+++||||||+||||||++|.|+.++ .+|+|.++|.++
T Consensus 8 ~I~vr~v~~~-------------fG~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P--~~GeI~i~G~~i 72 (263)
T COG1127 8 LIEVRGVTKS-------------FGDRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRP--DKGEILIDGEDI 72 (263)
T ss_pred eEEEeeeeee-------------cCCEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCC--CCCeEEEcCcch
Confidence 4666666543 3568899999999999999999999999999999999999884 599999999986
Q ss_pred Ch------hcccceeEEeccCCCCCCCCCHHHHHHHHHHc--CCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHH
Q 045902 957 KQ------ETFARISGYCEQNDIHSPNVTIYESLLYSAWL--RLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQR 1028 (1472)
Q Consensus 957 ~~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l--~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqr 1028 (1472)
.+ ...++++|+++|...+|..+||+||+.|..+- ++|++...+-++..|++.++.... ....+..|||||+
T Consensus 73 ~~ls~~~~~~ir~r~GvlFQ~gALFssltV~eNVafplre~~~lp~~~i~~lv~~KL~~VGL~~~~-~~~~PsELSGGM~ 151 (263)
T COG1127 73 PQLSEEELYEIRKRMGVLFQQGALFSSLTVFENVAFPLREHTKLPESLIRELVLMKLELVGLRGAA-ADLYPSELSGGMR 151 (263)
T ss_pred hccCHHHHHHHHhheeEEeeccccccccchhHhhheehHhhccCCHHHHHHHHHHHHHhcCCChhh-hhhCchhhcchHH
Confidence 43 23567899999999999999999999986442 355544444455555555444331 1112468999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcC
Q 045902 1029 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGP 1107 (1472)
Q Consensus 1029 qRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~ 1107 (1472)
||++||||++.+|+|||+||||+||||.++..+-++|+++.++ |.|++++|||.+ +++..+|++++|.+ |+|+..|+
T Consensus 152 KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHDl~-s~~~i~Drv~~L~~-gkv~~~Gt 229 (263)
T COG1127 152 KRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHDLD-SLLTIADRVAVLAD-GKVIAEGT 229 (263)
T ss_pred HHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECChH-HHHhhhceEEEEeC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999877 999999999987 58999999999986 79999999
Q ss_pred CCc----chhHHHHHHHhCCC
Q 045902 1108 LGR----QSHKLVEYFEAVPG 1124 (1472)
Q Consensus 1108 ~~~----~~~~~~~~f~~~~~ 1124 (1472)
.++ +...+.+||....+
T Consensus 230 ~~el~~sd~P~v~qf~~G~~~ 250 (263)
T COG1127 230 PEELLASDDPWVRQFFNGIRD 250 (263)
T ss_pred HHHHHhCCCHHHHHHhcCCCC
Confidence 753 23457788876543
No 53
>TIGR01257 rim_protein retinal-specific rim ABC transporter. This model describes the photoreceptor protein (rim protein) in eukaryotes. It is the member of ABC transporter superfamily. Rim protein is a membrane glycoprotein which is localized in the photoreceptor outer segment discs. Mutation/s in its genetic loci is implicated in the recessive Stargardt's disease.
Probab=100.00 E-value=1.4e-35 Score=402.35 Aligned_cols=212 Identities=22% Similarity=0.378 Sum_probs=180.8
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
..+.++|++..++ .+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|++
T Consensus 927 ~~L~I~nLsK~y~-----------~~~k~aL~~lsl~I~~Gei~aLLG~NGAGKSTLLkiLaGLl~--PtsG~I~i~G~d 993 (2272)
T TIGR01257 927 PGVCVKNLVKIFE-----------PSGRPAVDRLNITFYENQITAFLGHNGAGKTTTLSILTGLLP--PTSGTVLVGGKD 993 (2272)
T ss_pred ceEEEEeEEEEec-----------CCCceEEEeeEEEEcCCcEEEEECCCCChHHHHHHHHhcCCC--CCceEEEECCEE
Confidence 4677888876542 123579999999999999999999999999999999999877 458999999988
Q ss_pred CCh--hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCc-h---HHHHHHHHHcccccccccccCCCCCCCCCHHHHH
Q 045902 956 KKQ--ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPK-D---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRK 1029 (1472)
Q Consensus 956 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~-~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrq 1029 (1472)
+.. ...++.+|||+|++.+++.+||+|++.|.+.++... + +.++++++.++|.+..++.+ +.|||||||
T Consensus 994 I~~~~~~~r~~IG~~pQ~~~L~~~LTV~E~L~f~~~lkg~~~~~~~~~v~~lL~~vgL~~~~~~~~-----~~LSGGqKQ 1068 (2272)
T TIGR01257 994 IETNLDAVRQSLGMCPQHNILFHHLTVAEHILFYAQLKGRSWEEAQLEMEAMLEDTGLHHKRNEEA-----QDLSGGMQR 1068 (2272)
T ss_pred CcchHHHHhhcEEEEecCCcCCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHH
Confidence 643 234567999999999999999999999987765322 1 34677888888887777654 479999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1030 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1030 Rl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+||+||+.+|+||+|||||+|||+.+++.+++.|++++ +|+|||++||+++ ++...+||+++|++ |+++..|+.
T Consensus 1069 RLsLArALi~~PkVLLLDEPTSGLDp~sr~~l~~lL~~l~-~g~TIIltTHdmd-ea~~laDrI~iL~~-GkL~~~Gs~ 1144 (2272)
T TIGR01257 1069 KLSVAIAFVGDAKVVVLDEPTSGVDPYSRRSIWDLLLKYR-SGRTIIMSTHHMD-EADLLGDRIAIISQ-GRLYCSGTP 1144 (2272)
T ss_pred HHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHh-CCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 9999999999999999999999999999999999999995 5999999999976 46678999999986 788888875
No 54
>COG1135 AbcC ABC-type metal ion transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.7e-40 Score=362.88 Aligned_cols=199 Identities=26% Similarity=0.397 Sum_probs=170.4
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQNDIHS 975 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~~~~ 975 (1472)
...+|+|||++|++||++||+|+||||||||++++.++.. +.+|+|.++|.++.. ...|+.+|+++|+..++
T Consensus 18 ~~~al~~vsL~I~~GeI~GIIG~SGAGKSTLiR~iN~Le~--PtsG~v~v~G~di~~l~~~~Lr~~R~~IGMIFQhFnLL 95 (339)
T COG1135 18 TVTALDDVSLEIPKGEIFGIIGYSGAGKSTLLRLINLLER--PTSGSVFVDGQDLTALSEAELRQLRQKIGMIFQHFNLL 95 (339)
T ss_pred ceeeeccceEEEcCCcEEEEEcCCCCcHHHHHHHHhccCC--CCCceEEEcCEecccCChHHHHHHHhhccEEecccccc
Confidence 3579999999999999999999999999999999999877 459999999976532 34678899999999999
Q ss_pred CCCCHHHHHHHHHHcCC-CchH---HHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 045902 976 PNVTIYESLLYSAWLRL-PKDM---FVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1051 (1472)
Q Consensus 976 ~~lTv~e~l~~~~~l~~-~~~~---~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTs 1051 (1472)
...||.||+.|...+.. ++++ ++.++++.+||.+.++. .| .+|||||||||+|||||+.+|+||++|||||
T Consensus 96 ssrTV~~NvA~PLeiag~~k~ei~~RV~elLelVgL~dk~~~---yP--~qLSGGQKQRVaIARALa~~P~iLL~DEaTS 170 (339)
T COG1135 96 SSRTVFENVAFPLELAGVPKAEIKQRVAELLELVGLSDKADR---YP--AQLSGGQKQRVAIARALANNPKILLCDEATS 170 (339)
T ss_pred ccchHHhhhhhhHhhcCCCHHHHHHHHHHHHHHcCChhhhcc---Cc--hhcCcchhhHHHHHHHHhcCCCEEEecCccc
Confidence 99999999999887754 3333 44555555555544443 33 5899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1052 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+|||.+.+.|+++|+++.++ |.||+++||+++. +-+.|||+.+|++ |+++..|+..
T Consensus 171 ALDP~TT~sIL~LL~~In~~lglTIvlITHEm~V-vk~ic~rVavm~~-G~lvE~G~v~ 227 (339)
T COG1135 171 ALDPETTQSILELLKDINRELGLTIVLITHEMEV-VKRICDRVAVLDQ-GRLVEEGTVS 227 (339)
T ss_pred cCChHHHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHhhhheEeeC-CEEEEeccHH
Confidence 99999999999999999765 9999999999763 6678999999985 8999999864
No 55
>COG1131 CcmA ABC-type multidrug transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.5e-39 Score=376.90 Aligned_cols=212 Identities=31% Similarity=0.467 Sum_probs=184.5
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCC--CCCceEEEEcCCCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEF--VPQRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~--~~~~~~~yv~Q~d~~~~~l 262 (1472)
.+.+|+|||+.+++|++++++||||||||||||+|+|++.|+ +|+|.++|++.... ..++.+||++|++.+++.+
T Consensus 17 ~~~~l~~vs~~i~~Gei~gllG~NGAGKTTllk~l~gl~~p~---~G~i~i~G~~~~~~~~~~~~~igy~~~~~~~~~~l 93 (293)
T COG1131 17 DKTALDGVSFEVEPGEIFGLLGPNGAGKTTLLKILAGLLKPT---SGEILVLGYDVVKEPAKVRRRIGYVPQEPSLYPEL 93 (293)
T ss_pred CCEEEeceeEEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEEcCEeCccCHHHHHhheEEEccCCCCCccc
Confidence 468999999999999999999999999999999999999997 99999999988653 2356899999999999999
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||+|||.|.+++.+..... ....++.+++.+||++.+++.+
T Consensus 94 T~~e~l~~~~~l~~~~~~~----------------------------------~~~~~~~~l~~~~L~~~~~~~~----- 134 (293)
T COG1131 94 TVRENLEFFARLYGLSKEE----------------------------------AEERIEELLELFGLEDKANKKV----- 134 (293)
T ss_pred cHHHHHHHHHHHhCCChhH----------------------------------HHHHHHHHHHHcCCchhhCcch-----
Confidence 9999999998887643100 0012567899999998555555
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
++||+||||||+||.||+++|+++||||||+|||+.++.++.+.|+++++..++||+++.|++ .++.++||+|++|++|
T Consensus 135 ~~lS~G~kqrl~ia~aL~~~P~lliLDEPt~GLDp~~~~~~~~~l~~l~~~g~~tvlissH~l-~e~~~~~d~v~il~~G 213 (293)
T COG1131 135 RTLSGGMKQRLSIALALLHDPELLILDEPTSGLDPESRREIWELLRELAKEGGVTILLSTHIL-EEAEELCDRVIILNDG 213 (293)
T ss_pred hhcCHHHHHHHHHHHHHhcCCCEEEECCCCcCCCHHHHHHHHHHHHHHHhCCCcEEEEeCCcH-HHHHHhCCEEEEEeCC
Confidence 459999999999999999999999999999999999999999999999986668999988765 5888889999999999
Q ss_pred eEEEecChhHHHHHHHh
Q 045902 423 EIVYQGPREYVLDFFES 439 (1472)
Q Consensus 423 ~iv~~G~~~~~~~~F~~ 439 (1472)
++++.|+.+++...+..
T Consensus 214 ~~~~~g~~~~l~~~~~~ 230 (293)
T COG1131 214 KIIAEGTPEELKEKFGG 230 (293)
T ss_pred EEEEeCCHHHHHHhhcc
Confidence 99999999988766543
No 56
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.9e-40 Score=341.28 Aligned_cols=198 Identities=28% Similarity=0.393 Sum_probs=179.7
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC--hhcccceeEEeccCCCCCCCCCH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK--QETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~--~~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
.++++||||+++.||++||+|||||||||+|++|++.+.| .+|.|.+||.+.. +...++.+|.++.+..++..+|+
T Consensus 15 v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P--~~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~RlT~ 92 (245)
T COG4555 15 VQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIP--DSGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARLTA 92 (245)
T ss_pred HhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccC--CCceEEEeecccccChHHHhhhcceecCCcChhhhhhH
Confidence 4599999999999999999999999999999999999874 5999999999853 35678899999988899999999
Q ss_pred HHHHHHHHHcCCC----chHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHH
Q 045902 981 YESLLYSAWLRLP----KDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1056 (1472)
Q Consensus 981 ~e~l~~~~~l~~~----~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~ 1056 (1472)
+|||.|.+.+..- .+.+.+++.+.|+|..+.|+.++ ++|.||||||+|||||+++|++++|||||||||..
T Consensus 93 rEnl~~Fa~L~~l~~~~~kari~~l~k~l~l~~~~~rRv~-----~~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~ 167 (245)
T COG4555 93 RENLKYFARLNGLSRKEIKARIAELSKRLQLLEYLDRRVG-----EFSTGMKQKVAIARALVHDPSILVLDEPTSGLDIR 167 (245)
T ss_pred HHHHHHHHHHhhhhhhHHHHHHHHHHHHhChHHHHHHHHh-----hhchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHH
Confidence 9999998887532 23678899999999999999876 69999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1057 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1057 ~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+.+.+.+.++++.++|++||++||.++ ++...||++++|++ |++++.|...
T Consensus 168 ~~r~~~dfi~q~k~egr~viFSSH~m~-EvealCDrvivlh~-Gevv~~gs~~ 218 (245)
T COG4555 168 TRRKFHDFIKQLKNEGRAVIFSSHIMQ-EVEALCDRVIVLHK-GEVVLEGSIE 218 (245)
T ss_pred HHHHHHHHHHHhhcCCcEEEEecccHH-HHHHhhheEEEEec-CcEEEcCCHH
Confidence 999999999999999999999999975 67779999999986 7899999864
No 57
>COG1120 FepC ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components [Inorganic ion transport and metabolism / Coenzyme metabolism]
Probab=100.00 E-value=6.3e-40 Score=363.58 Aligned_cols=210 Identities=30% Similarity=0.435 Sum_probs=181.6
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCC---ceEEEEcCCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQ---RTCAYISQHDLHHGE 261 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~ 261 (1472)
++.||+|+|+.+++|++++|+||||||||||||+|+|.++|. +|+|.++|+++.++..+ +.++||||.....+.
T Consensus 14 ~~~il~~ls~~i~~G~i~~iiGpNG~GKSTLLk~l~g~l~p~---~G~V~l~g~~i~~~~~kelAk~ia~vpQ~~~~~~~ 90 (258)
T COG1120 14 GKPILDDLSFSIPKGEITGILGPNGSGKSTLLKCLAGLLKPK---SGEVLLDGKDIASLSPKELAKKLAYVPQSPSAPFG 90 (258)
T ss_pred CeeEEecceEEecCCcEEEEECCCCCCHHHHHHHHhccCCCC---CCEEEECCCchhhcCHHHHhhhEEEeccCCCCCCC
Confidence 357999999999999999999999999999999999999997 89999999999887653 789999999988889
Q ss_pred CCHHHHHHHhhhc-cCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 262 MTVRETLDFSGRC-LGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 262 lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
+||+|-+.++..- ++.. ...+++ |. ..++..|+.+|+.+.++..+..
T Consensus 91 ~tV~d~V~~GR~p~~~~~------~~~~~~----------D~---------------~~v~~aL~~~~~~~la~r~~~~- 138 (258)
T COG1120 91 LTVYELVLLGRYPHLGLF------GRPSKE----------DE---------------EIVEEALELLGLEHLADRPVDE- 138 (258)
T ss_pred cEEeehHhhcCCcccccc------cCCCHh----------HH---------------HHHHHHHHHhCcHHHhcCcccc-
Confidence 9999999886431 1100 000111 11 1246679999999999988865
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
|||||||||.|||||+.+|++|+||||||+||...+.++++.++++++..|.|+|+++|++ ....+++|++++|+
T Consensus 139 ----LSGGerQrv~iArALaQ~~~iLLLDEPTs~LDi~~Q~evl~ll~~l~~~~~~tvv~vlHDl-N~A~ryad~~i~lk 213 (258)
T COG1120 139 ----LSGGERQRVLIARALAQETPILLLDEPTSHLDIAHQIEVLELLRDLNREKGLTVVMVLHDL-NLAARYADHLILLK 213 (258)
T ss_pred ----cChhHHHHHHHHHHHhcCCCEEEeCCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEE
Confidence 9999999999999999999999999999999999999999999999988899999988765 47789999999999
Q ss_pred CCeEEEecChhHHH
Q 045902 421 EGEIVYQGPREYVL 434 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~ 434 (1472)
+|+++.+|++++++
T Consensus 214 ~G~i~a~G~p~evl 227 (258)
T COG1120 214 DGKIVAQGTPEEVL 227 (258)
T ss_pred CCeEEeecCcchhc
Confidence 99999999998775
No 58
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2e-39 Score=346.26 Aligned_cols=208 Identities=27% Similarity=0.398 Sum_probs=184.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 261 (1472)
.+.+++|+|++|++||+++++|||||||||+||+|.++++|+ +|+|.+||+++.+..+ ++.+|||-|+--+||+
T Consensus 13 ~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLiept---~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 13 NKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIEPT---SGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccCCC---CceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 467999999999999999999999999999999999999998 9999999999988654 6899999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc--cccccccC
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI--CADIMVGN 339 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~--~~dt~vg~ 339 (1472)
+||.||+.+--.+.+... .+ .+..++++|+.+||+. .+|
T Consensus 90 ~Tv~eNIa~VP~L~~w~k----------~~------------------------i~~r~~ELl~lvgL~p~~~~~----- 130 (309)
T COG1125 90 LTVAENIATVPKLLGWDK----------ER------------------------IKKRADELLDLVGLDPSEYAD----- 130 (309)
T ss_pred ccHHHHHHhhhhhcCCCH----------HH------------------------HHHHHHHHHHHhCCCHHHHhh-----
Confidence 999999988766554321 10 1123577899999974 455
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.++..|||||+|||.+||||+.+|++++||||+++||+.++.++.+.++++.+..++|+|+..| ...|.+.++|||++|
T Consensus 131 RyP~eLSGGQQQRVGv~RALAadP~ilLMDEPFgALDpI~R~~lQ~e~~~lq~~l~kTivfVTH-DidEA~kLadri~vm 209 (309)
T COG1125 131 RYPHELSGGQQQRVGVARALAADPPILLMDEPFGALDPITRKQLQEEIKELQKELGKTIVFVTH-DIDEALKLADRIAVM 209 (309)
T ss_pred cCchhcCcchhhHHHHHHHHhcCCCeEeecCCccccChhhHHHHHHHHHHHHHHhCCEEEEEec-CHHHHHhhhceEEEe
Confidence 4556799999999999999999999999999999999999999999999999999999998765 577999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 045902 420 SEGEIVYQGPREYVLD 435 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~~ 435 (1472)
++|+++..+++++++.
T Consensus 210 ~~G~i~Q~~~P~~il~ 225 (309)
T COG1125 210 DAGEIVQYDTPDEILA 225 (309)
T ss_pred cCCeEEEeCCHHHHHh
Confidence 9999999999999864
No 59
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=1.5e-39 Score=373.82 Aligned_cols=216 Identities=29% Similarity=0.418 Sum_probs=191.5
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCC-ceEEEEcCCCCCCCCCCHHH
Q 045902 188 ILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQ-RTCAYISQHDLHHGEMTVRE 266 (1472)
Q Consensus 188 iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lTV~E 266 (1472)
+|+|+|+.|++||+++|+|||||||||||++|||+.+++ +|+|.++|.++++..|+ |.+|+|+|+..++|+|||+|
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~~~---~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~ 94 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEEPT---SGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYE 94 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHH
Confidence 899999999999999999999999999999999999998 99999999999998875 88999999999999999999
Q ss_pred HHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCC
Q 045902 267 TLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGIS 346 (1472)
Q Consensus 267 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLS 346 (1472)
|+.|+.+.++... .+++ ..++.+.+.|+|++..|.+.. +||
T Consensus 95 Niaf~Lk~~~~~k--------------------~ei~--------------~rV~eva~~L~l~~lL~r~P~-----~LS 135 (338)
T COG3839 95 NIAFGLKLRGVPK--------------------AEID--------------KRVKEVAKLLGLEHLLNRKPL-----QLS 135 (338)
T ss_pred HhhhhhhhCCCch--------------------HHHH--------------HHHHHHHHHcCChhHHhcCcc-----cCC
Confidence 9999988765321 1111 135678899999999987654 599
Q ss_pred hHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEE
Q 045902 347 GGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVY 426 (1472)
Q Consensus 347 GGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~ 426 (1472)
|||||||++||||+.+|++++||||+|.||...+.++...|+++.+..+.|+|..+|+ ..|...++|||.+|++|++..
T Consensus 136 GGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~~mr~ei~~lh~~l~~T~IYVTHD-q~EAmtladri~Vm~~G~i~Q 214 (338)
T COG3839 136 GGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRVLMRSEIKKLHERLGTTTIYVTHD-QVEAMTLADRIVVMNDGRIQQ 214 (338)
T ss_pred hhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHHHHHHHHHHHHHhcCCcEEEEcCC-HHHHHhhCCEEEEEeCCeeee
Confidence 9999999999999999999999999999999999999999999988888888887655 568899999999999999999
Q ss_pred ecChhHHHHHHHhcCCCCCCCCChHHHH
Q 045902 427 QGPREYVLDFFESVGFRCPERKGAADFL 454 (1472)
Q Consensus 427 ~G~~~~~~~~F~~~G~~cp~~~~~adfl 454 (1472)
.|++.++ |..|...-+|.|+
T Consensus 215 ~g~p~el--------y~~P~n~fVA~Fi 234 (338)
T COG3839 215 VGTPLEL--------YERPANLFVAGFI 234 (338)
T ss_pred cCChHHH--------hhCccchhhhhhc
Confidence 9999998 4456666667765
No 60
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-39 Score=351.93 Aligned_cols=188 Identities=26% Similarity=0.394 Sum_probs=165.8
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHH
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
...+|+|||++|.+||+++|+||||||||||||+|+|..+ +.+|+|.++|.+.. .....+|||+|++.++|-+||+
T Consensus 15 ~~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~--p~~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 15 GVEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEK--PTSGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred ceEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 3679999999999999999999999999999999999987 45899999999873 2345689999999999999999
Q ss_pred HHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHH
Q 045902 982 ESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1057 (1472)
Q Consensus 982 e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~ 1057 (1472)
||+.++...+. +.+ +.+++.++.+||.++.|.. +..|||||||||+|||||+.+|+||+||||+++||+.+
T Consensus 91 ~NV~l~l~~~~~~~~e~~~~a~~~L~~VgL~~~~~~~-----P~qLSGGMrQRVaiARAL~~~P~lLLlDEPFgALDalT 165 (248)
T COG1116 91 DNVALGLELRGKSKAEARERAKELLELVGLAGFEDKY-----PHQLSGGMRQRVAIARALATRPKLLLLDEPFGALDALT 165 (248)
T ss_pred hhheehhhccccchHhHHHHHHHHHHHcCCcchhhcC-----ccccChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHH
Confidence 99999887753 222 4567788888888887765 35899999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1058 AAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1058 ~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
+..+++.|.++.+ .++|||++|||.+ |...+.|||++|.++
T Consensus 166 R~~lq~~l~~lw~~~~~TvllVTHdi~-EAv~LsdRivvl~~~ 207 (248)
T COG1116 166 REELQDELLRLWEETRKTVLLVTHDVD-EAVYLADRVVVLSNR 207 (248)
T ss_pred HHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHhhhCEEEEecCC
Confidence 9999999999864 4899999999987 677789999999864
No 61
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.3e-39 Score=344.56 Aligned_cols=201 Identities=28% Similarity=0.391 Sum_probs=170.3
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCCCC
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQNDIH 974 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~~~ 974 (1472)
+++++|+|||+.|++||++||+|||||||||||++|.|... +.+|+|.++|.++.. ..+++.+||++|++.+
T Consensus 15 ~~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d--~t~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 15 GGHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVD--PTSGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CCceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccC--CCcceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 46789999999999999999999999999999999999766 458999999976421 3467889999999999
Q ss_pred CCCCCHHHHHHHHHHc---------CCCchHH---HHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCC
Q 045902 975 SPNVTIYESLLYSAWL---------RLPKDMF---VEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPS 1042 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l---------~~~~~~~---~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~ 1042 (1472)
.+.++|.+|++.+..- .....+. .-++++.+|+.+.+-+.. +.|||||+|||+|||||+.+|+
T Consensus 93 v~r~sv~~NVl~grl~~~s~~~slfglfsk~dk~~Al~aLervgi~~~A~qra-----~~LSGGQQQRVaIARaL~Q~pk 167 (258)
T COG3638 93 VPRLSVLENVLLGRLGYTSTWRSLFGLFSKEDKAQALDALERVGILDKAYQRA-----STLSGGQQQRVAIARALVQQPK 167 (258)
T ss_pred ccccHHHHHHHhhhcccchHHHHHhCCCCHHHHHHHHHHHHHcCcHHHHHHHh-----ccCCcchhHHHHHHHHHhcCCC
Confidence 9999999999865322 2222222 335566666666655554 4799999999999999999999
Q ss_pred CccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1043 IIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1043 il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
|++.|||+++|||.+++.||+.|++++++ |.|||++.||.+. ..++|||++-|++ |+++|+||..+
T Consensus 168 iILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~vdl-A~~Y~~Riigl~~-G~ivfDg~~~e 234 (258)
T COG3638 168 IILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQVDL-AKKYADRIIGLKA-GRIVFDGPASE 234 (258)
T ss_pred EEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechHHH-HHHHHhhheEecC-CcEEEeCChhh
Confidence 99999999999999999999999999754 9999999999875 6789999999985 89999999864
No 62
>COG3638 ABC-type phosphate/phosphonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4e-39 Score=342.66 Aligned_cols=216 Identities=25% Similarity=0.362 Sum_probs=182.6
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLH 258 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~ 258 (1472)
++++|+|||+.|++|||++|+|||||||||||++|+|..+++ +|+|.+||.++..... ++.+||++|+..+
T Consensus 16 ~~~aL~~Vnl~I~~GE~VaiIG~SGaGKSTLLR~lngl~d~t---~G~i~~~g~~i~~~~~k~lr~~r~~iGmIfQ~~nL 92 (258)
T COG3638 16 GHQALKDVNLEINQGEMVAIIGPSGAGKSTLLRSLNGLVDPT---SGEILFNGVQITKLKGKELRKLRRDIGMIFQQFNL 92 (258)
T ss_pred CceeeeeEeEEeCCCcEEEEECCCCCcHHHHHHHHhcccCCC---cceEEecccchhccchHHHHHHHHhceeEeccCCc
Confidence 457999999999999999999999999999999999999988 9999999998876542 3689999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
.+.+||.||+..+..-+. +..+ .-.+..+.++.... -..|+.+|+.+.+-+..+
T Consensus 93 v~r~sv~~NVl~grl~~~--s~~~---------slfglfsk~dk~~A---------------l~aLervgi~~~A~qra~ 146 (258)
T COG3638 93 VPRLSVLENVLLGRLGYT--STWR---------SLFGLFSKEDKAQA---------------LDALERVGILDKAYQRAS 146 (258)
T ss_pred ccccHHHHHHHhhhcccc--hHHH---------HHhCCCCHHHHHHH---------------HHHHHHcCcHHHHHHHhc
Confidence 999999999987643221 1111 11222222222221 235889999998888877
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
+ |||||+|||+|||||+.+|++++-|||+++||+.++.++++.|+++.+..|.|+|+.+||- .-..++||||+-
T Consensus 147 ~-----LSGGQQQRVaIARaL~Q~pkiILADEPvasLDp~~a~~Vm~~l~~in~~~g~Tvi~nLH~v-dlA~~Y~~Riig 220 (258)
T COG3638 147 T-----LSGGQQQRVAIARALVQQPKIILADEPVASLDPESAKKVMDILKDINQEDGITVIVNLHQV-DLAKKYADRIIG 220 (258)
T ss_pred c-----CCcchhHHHHHHHHHhcCCCEEecCCcccccChhhHHHHHHHHHHHHHHcCCEEEEEechH-HHHHHHHhhheE
Confidence 6 9999999999999999999999999999999999999999999999999999999999875 466789999999
Q ss_pred ecCCeEEEecChhHHHH
Q 045902 419 LSEGEIVYQGPREYVLD 435 (1472)
Q Consensus 419 L~~G~iv~~G~~~~~~~ 435 (1472)
|++|+|+|.||++++.+
T Consensus 221 l~~G~ivfDg~~~el~~ 237 (258)
T COG3638 221 LKAGRIVFDGPASELTD 237 (258)
T ss_pred ecCCcEEEeCChhhhhH
Confidence 99999999999988754
No 63
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=7e-39 Score=348.64 Aligned_cols=189 Identities=29% Similarity=0.444 Sum_probs=162.9
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hc-ccceeEEeccCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ET-FARISGYCEQNDIHS 975 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~-~~~~~gyv~Q~~~~~ 975 (1472)
..+|++||++|++||++||||||||||||||++|.|...+ .+|.|.++|.+... .. +++.+|||+|+..+.
T Consensus 18 ~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~p--t~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~nLl 95 (226)
T COG1136 18 VEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKP--TSGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFNLL 95 (226)
T ss_pred eEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEcCcCCHHHHHHHHHHhEEEECccCCCC
Confidence 5799999999999999999999999999999999998774 58999999976532 22 345799999999999
Q ss_pred CCCCHHHHHHHHHHcCCCc----hHHHHHHHHHcccccccc-cccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 045902 976 PNVTIYESLLYSAWLRLPK----DMFVEEVMELVEMKALRN-SLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1050 (1472)
Q Consensus 976 ~~lTv~e~l~~~~~l~~~~----~~~~~~v~~~l~l~~~~~-~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPT 1050 (1472)
|++||.||+.....+.... ....+++++.+|+.+..+ .. +..|||||||||+|||||+.+|+||+.||||
T Consensus 96 ~~ltv~ENv~lpl~~~~~~~~~~~~~~~~l~~~lgl~~~~~~~~-----p~eLSGGqqQRVAIARAL~~~P~iilADEPT 170 (226)
T COG1136 96 PDLTVLENVELPLLIAGKSAGRRKRAAEELLEVLGLEDRLLKKK-----PSELSGGQQQRVAIARALINNPKIILADEPT 170 (226)
T ss_pred CCCCHHHHHHhHHHHcCCChhHHHHHHHHHHHhcCChhhhccCC-----chhcCHHHHHHHHHHHHHhcCCCeEEeeCcc
Confidence 9999999999766554322 245677788888875544 32 3579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCc
Q 045902 1051 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1100 (1472)
Q Consensus 1051 sgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg 1100 (1472)
.+||+.++..|++++++++++ |+|||++|||| ++...|||++.|.+|+
T Consensus 171 gnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~i~l~dG~ 219 (226)
T COG1136 171 GNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRVIELKDGK 219 (226)
T ss_pred ccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEEEEEeCCe
Confidence 999999999999999999866 99999999996 4788999999999753
No 64
>COG1136 SalX ABC-type antimicrobial peptide transport system, ATPase component [Defense mechanisms]
Probab=100.00 E-value=1.7e-38 Score=345.66 Aligned_cols=196 Identities=29% Similarity=0.446 Sum_probs=170.2
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEcCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYISQHDL 257 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 257 (1472)
..++|+|+|+.|++||+++|+|||||||||||++|.|...|+ +|.|.++|.++..... ++.+|||+|+..
T Consensus 17 ~~~~L~~v~l~i~~Ge~vaI~GpSGSGKSTLLniig~ld~pt---~G~v~i~g~d~~~l~~~~~~~~R~~~iGfvFQ~~n 93 (226)
T COG1136 17 KVEALKDVNLEIEAGEFVAIVGPSGSGKSTLLNLLGGLDKPT---SGEVLINGKDLTKLSEKELAKLRRKKIGFVFQNFN 93 (226)
T ss_pred ceEecccceEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEcCcCCHHHHHHHHHHhEEEECccCC
Confidence 368999999999999999999999999999999999999997 9999999999887643 357999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccc-cc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICAD-IM 336 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d-t~ 336 (1472)
++|++||+||+.......+.... .. ....+.+++.+||++..+ ..
T Consensus 94 Ll~~ltv~ENv~lpl~~~~~~~~--------~~--------------------------~~~~~~l~~~lgl~~~~~~~~ 139 (226)
T COG1136 94 LLPDLTVLENVELPLLIAGKSAG--------RR--------------------------KRAAEELLEVLGLEDRLLKKK 139 (226)
T ss_pred CCCCCCHHHHHHhHHHHcCCChh--------HH--------------------------HHHHHHHHHhcCChhhhccCC
Confidence 99999999999987655443210 00 012356788999997665 55
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 337 VGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 337 vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
+. .|||||||||+|||||+.+|++++.||||.+||+.++..|++.|+++++..|+|+|+++|.| ++...+||+
T Consensus 140 p~-----eLSGGqqQRVAIARAL~~~P~iilADEPTgnLD~~t~~~V~~ll~~~~~~~g~tii~VTHd~--~lA~~~dr~ 212 (226)
T COG1136 140 PS-----ELSGGQQQRVAIARALINNPKIILADEPTGNLDSKTAKEVLELLRELNKERGKTIIMVTHDP--ELAKYADRV 212 (226)
T ss_pred ch-----hcCHHHHHHHHHHHHHhcCCCeEEeeCccccCChHHHHHHHHHHHHHHHhcCCEEEEEcCCH--HHHHhCCEE
Confidence 54 49999999999999999999999999999999999999999999999988899999998865 688899999
Q ss_pred EEecCCeE
Q 045902 417 ILLSEGEI 424 (1472)
Q Consensus 417 ilL~~G~i 424 (1472)
+.|.+|++
T Consensus 213 i~l~dG~~ 220 (226)
T COG1136 213 IELKDGKI 220 (226)
T ss_pred EEEeCCee
Confidence 99999994
No 65
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-39 Score=370.02 Aligned_cols=223 Identities=28% Similarity=0.417 Sum_probs=195.8
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCC-ceEEEEcCCCCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQ-RTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~-~~~~yv~Q~d~~~~~lT 263 (1472)
...+|+|+|+.|++||+++|+|||||||||||++|||+..|+ +|+|.++|++++...+. |.+++|+|+-.+||+||
T Consensus 17 ~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~p~---~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHlt 93 (352)
T COG3842 17 DFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQPS---SGEILLDGEDITDVPPEKRPIGMVFQSYALFPHMT 93 (352)
T ss_pred CeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCChhhcccceeecCcccCCCCc
Confidence 457999999999999999999999999999999999999998 99999999999998774 78999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.|+.+.+.... ++++ +..+++.++.++|++.++.++.
T Consensus 94 V~~NVafGLk~~~~~~-------------------~~~i--------------~~rv~e~L~lV~L~~~~~R~p~----- 135 (352)
T COG3842 94 VEENVAFGLKVRKKLK-------------------KAEI--------------KARVEEALELVGLEGFADRKPH----- 135 (352)
T ss_pred HHHHhhhhhhhcCCCC-------------------HHHH--------------HHHHHHHHHHcCchhhhhhChh-----
Confidence 9999999977332111 0111 1135678899999998876654
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
.|||||||||++||||+.+|++|+||||.|+||..-+.++...|+++.+..|.|.|..+|+ ..|...++|||.+|++|+
T Consensus 136 qLSGGQqQRVALARAL~~~P~vLLLDEPlSaLD~kLR~~mr~Elk~lq~~~giT~i~VTHD-qeEAl~msDrI~Vm~~G~ 214 (352)
T COG3842 136 QLSGGQQQRVALARALVPEPKVLLLDEPLSALDAKLREQMRKELKELQRELGITFVYVTHD-QEEALAMSDRIAVMNDGR 214 (352)
T ss_pred hhChHHHHHHHHHHHhhcCcchhhhcCcccchhHHHHHHHHHHHHHHHHhcCCeEEEEECC-HHHHhhhccceEEccCCc
Confidence 5999999999999999999999999999999999999999999999999899998887755 568899999999999999
Q ss_pred EEEecChhHHHHHHHhcCCCCCCCCChHHHHHHh
Q 045902 424 IVYQGPREYVLDFFESVGFRCPERKGAADFLQEV 457 (1472)
Q Consensus 424 iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev 457 (1472)
|...|+++++ |..|...-+|||+-+.
T Consensus 215 I~Q~gtP~ei--------Y~~P~~~fVA~FiG~~ 240 (352)
T COG3842 215 IEQVGTPEEI--------YERPATRFVADFIGES 240 (352)
T ss_pred eeecCCHHHH--------hhCcchHHHHHHhCcc
Confidence 9999999998 5678888888888654
No 66
>COG1125 OpuBA ABC-type proline/glycine betaine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=3.7e-39 Score=344.15 Aligned_cols=200 Identities=25% Similarity=0.356 Sum_probs=174.7
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCC
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPN 977 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~ 977 (1472)
.++.+++|+|++|++||+++++|||||||||+|++|.++.+ +.+|+|.+||.++.. ...||.+|||-|.-.+||+
T Consensus 12 ~~~~av~~v~l~I~~gef~vliGpSGsGKTTtLkMINrLie--pt~G~I~i~g~~i~~~d~~~LRr~IGYviQqigLFPh 89 (309)
T COG1125 12 GNKKAVDDVNLTIEEGEFLVLIGPSGSGKTTTLKMINRLIE--PTSGEILIDGEDISDLDPVELRRKIGYVIQQIGLFPH 89 (309)
T ss_pred CCceeeeeeeEEecCCeEEEEECCCCCcHHHHHHHHhcccC--CCCceEEECCeecccCCHHHHHHhhhhhhhhcccCCC
Confidence 46789999999999999999999999999999999999987 459999999998754 4678899999999999999
Q ss_pred CCHHHHHHHHHHcCC-Cc---hHHHHHHHHHccccc--ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 045902 978 VTIYESLLYSAWLRL-PK---DMFVEEVMELVEMKA--LRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1051 (1472)
Q Consensus 978 lTv~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~--~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTs 1051 (1472)
+||.||+.+--.+.. ++ +++++|++++++|.. +.++. ++.|||||+|||.+||||+++|+||+||||++
T Consensus 90 ~Tv~eNIa~VP~L~~w~k~~i~~r~~ELl~lvgL~p~~~~~Ry-----P~eLSGGQQQRVGv~RALAadP~ilLMDEPFg 164 (309)
T COG1125 90 LTVAENIATVPKLLGWDKERIKKRADELLDLVGLDPSEYADRY-----PHELSGGQQQRVGVARALAADPPILLMDEPFG 164 (309)
T ss_pred ccHHHHHHhhhhhcCCCHHHHHHHHHHHHHHhCCCHHHHhhcC-----chhcCcchhhHHHHHHHHhcCCCeEeecCCcc
Confidence 999999987655542 22 256778888888864 45543 45899999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1052 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+|||-++..+++.++++.++ |+|||++|||.+ +.+.+.||+.+|++ |+++..+++.
T Consensus 165 ALDpI~R~~lQ~e~~~lq~~l~kTivfVTHDid-EA~kLadri~vm~~-G~i~Q~~~P~ 221 (309)
T COG1125 165 ALDPITRKQLQEEIKELQKELGKTIVFVTHDID-EALKLADRIAVMDA-GEIVQYDTPD 221 (309)
T ss_pred ccChhhHHHHHHHHHHHHHHhCCEEEEEecCHH-HHHhhhceEEEecC-CeEEEeCCHH
Confidence 99999999999999999765 999999999987 78899999999985 7888777653
No 67
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5e-39 Score=352.78 Aligned_cols=200 Identities=30% Similarity=0.483 Sum_probs=178.3
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCc---cCCh-hcccceeEEeccCCCCCC
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGY---PKKQ-ETFARISGYCEQNDIHSP 976 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~---~~~~-~~~~~~~gyv~Q~~~~~~ 976 (1472)
+...+++|||++|+.||++||+|||||||||||++|+|+.+ +..|.|.+||. +..+ ....|.+|||+|+..+|+
T Consensus 13 ~~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~--p~~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 13 GAFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLET--PDAGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred ccccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCC--CCCceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 45679999999999999999999999999999999999987 45899999999 5443 344678999999999999
Q ss_pred CCCHHHHHHHHHHcCC--C-c---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 045902 977 NVTIYESLLYSAWLRL--P-K---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1050 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~--~-~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPT 1050 (1472)
+|||.||+.|+...+. + + +.+++++++++.|.++.+.. +..|||||||||++||||+..|++|+||||.
T Consensus 91 HmtVa~NIAFGl~~~~~~p~~~~~r~rv~elL~lvqL~~la~ry-----P~QLSGGQrQRVALARALA~eP~vLLLDEPf 165 (345)
T COG1118 91 HMTVADNIAFGLKVRKERPSEAEIRARVEELLRLVQLEGLADRY-----PAQLSGGQRQRVALARALAVEPKVLLLDEPF 165 (345)
T ss_pred cchHHhhhhhcccccccCCChhhHHHHHHHHHHHhcccchhhcC-----chhcChHHHHHHHHHHHhhcCCCeEeecCCc
Confidence 9999999999987651 1 1 25688899999999988875 3589999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1051 SGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1051 sgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
++||+.-++.+.+.|+++.+. |.|+|++|||+. +.++.+|||++|++ |++...||..
T Consensus 166 ~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTHD~e-ea~~ladrvvvl~~-G~Ieqvg~p~ 223 (345)
T COG1118 166 GALDAKVRKELRRWLRKLHDRLGVTTVFVTHDQE-EALELADRVVVLNQ-GRIEQVGPPD 223 (345)
T ss_pred hhhhHHHHHHHHHHHHHHHHhhCceEEEEeCCHH-HHHhhcceEEEecC-CeeeeeCCHH
Confidence 999999999999999999866 999999999986 79999999999986 7899889864
No 68
>COG1118 CysA ABC-type sulfate/molybdate transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.1e-38 Score=350.18 Aligned_cols=223 Identities=28% Similarity=0.447 Sum_probs=187.1
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCe---eCCCCCC-CceEEEEcCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGH---ELTEFVP-QRTCAYISQHDLHHG 260 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~---~~~~~~~-~~~~~yv~Q~d~~~~ 260 (1472)
...+++|||+.|+.||+++++|||||||||||++|+|+..|+ +|+|.+||. +.+.... .|.||||+|+-.+|+
T Consensus 14 ~~~a~~di~l~i~~Ge~vaLlGpSGaGKsTlLRiIAGLe~p~---~G~I~~~~~~l~D~~~~~~~~R~VGfvFQ~YALF~ 90 (345)
T COG1118 14 AFGALDDISLDIKSGELVALLGPSGAGKSTLLRIIAGLETPD---AGRIRLNGRVLFDVSNLAVRDRKVGFVFQHYALFP 90 (345)
T ss_pred cccccccceeeecCCcEEEEECCCCCcHHHHHHHHhCcCCCC---CceEEECCEeccchhccchhhcceeEEEechhhcc
Confidence 356899999999999999999999999999999999999998 999999999 6555333 378999999999999
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
.|||.||+.|+.+++... + +..++ +..++++|+.+.|++.+|.+
T Consensus 91 HmtVa~NIAFGl~~~~~~-----p-------------~~~~~--------------r~rv~elL~lvqL~~la~ry---- 134 (345)
T COG1118 91 HMTVADNIAFGLKVRKER-----P-------------SEAEI--------------RARVEELLRLVQLEGLADRY---- 134 (345)
T ss_pred cchHHhhhhhcccccccC-----C-------------ChhhH--------------HHHHHHHHHHhcccchhhcC----
Confidence 999999999998765210 0 00011 11356678899999888755
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
+..|||||||||++||||+..|++|+||||+++||..-+.++-+.|+++.+..+.|++++.| ...|+++++|+|++|+
T Consensus 135 -P~QLSGGQrQRVALARALA~eP~vLLLDEPf~ALDa~vr~~lr~wLr~~~~~~~~ttvfVTH-D~eea~~ladrvvvl~ 212 (345)
T COG1118 135 -PAQLSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRKLHDRLGVTTVFVTH-DQEEALELADRVVVLN 212 (345)
T ss_pred -chhcChHHHHHHHHHHHhhcCCCeEeecCCchhhhHHHHHHHHHHHHHHHHhhCceEEEEeC-CHHHHHhhcceEEEec
Confidence 45699999999999999999999999999999999999999999999998877888888765 4569999999999999
Q ss_pred CCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHH
Q 045902 421 EGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQE 456 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~e 456 (1472)
+|+|...||++++- ..|...-.+.|+-+
T Consensus 213 ~G~Ieqvg~p~ev~--------~~P~s~fV~~f~G~ 240 (345)
T COG1118 213 QGRIEQVGPPDEVY--------DHPASRFVARFLGE 240 (345)
T ss_pred CCeeeeeCCHHHHh--------cCCCccceeccccc
Confidence 99999999999983 34555555555543
No 69
>COG1121 ZnuC ABC-type Mn/Zn transport systems, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.2e-38 Score=347.04 Aligned_cols=206 Identities=27% Similarity=0.421 Sum_probs=173.9
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCC---CCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHD---LHHGEMT 263 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d---~~~~~lT 263 (1472)
++|+|||+.+++|++++|+||||||||||+|+|.|++.|. +|+|.++|.+.....++..+|||||.. +-| .+|
T Consensus 18 ~vl~~i~l~v~~G~~~~iiGPNGaGKSTLlK~iLGll~p~---~G~i~~~g~~~~~~~~~~~IgYVPQ~~~~d~~f-P~t 93 (254)
T COG1121 18 PVLEDISLSVEKGEITALIGPNGAGKSTLLKAILGLLKPS---SGEIKIFGKPVRKRRKRLRIGYVPQKSSVDRSF-PIT 93 (254)
T ss_pred eeeeccEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCcCC---cceEEEccccccccccCCeEEEcCcccccCCCC-CcC
Confidence 4999999999999999999999999999999999999998 999999999888776677899999964 334 479
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+|.+..+..-+. ......++.++ ..++..|+.+|+.+.+|..+|.
T Consensus 94 V~d~V~~g~~~~~-----g~~~~~~~~d~-------------------------~~v~~aL~~Vgm~~~~~r~i~~---- 139 (254)
T COG1121 94 VKDVVLLGRYGKK-----GWFRRLNKKDK-------------------------EKVDEALERVGMEDLRDRQIGE---- 139 (254)
T ss_pred HHHHHHccCcccc-----cccccccHHHH-------------------------HHHHHHHHHcCchhhhCCcccc----
Confidence 9999987632111 01111111111 1357789999999999999987
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||+|||-|||||+++|++|+|||||+|+|+.++..|++.|+++.+. |+||+++.| ....+.++||+|+.|+ ++
T Consensus 140 -LSGGQ~QRV~lARAL~~~p~lllLDEP~~gvD~~~~~~i~~lL~~l~~e-g~tIl~vtH-DL~~v~~~~D~vi~Ln-~~ 215 (254)
T COG1121 140 -LSGGQKQRVLLARALAQNPDLLLLDEPFTGVDVAGQKEIYDLLKELRQE-GKTVLMVTH-DLGLVMAYFDRVICLN-RH 215 (254)
T ss_pred -cCcHHHHHHHHHHHhccCCCEEEecCCcccCCHHHHHHHHHHHHHHHHC-CCEEEEEeC-CcHHhHhhCCEEEEEc-Ce
Confidence 9999999999999999999999999999999999999999999999986 999988765 4568889999999995 57
Q ss_pred EEEecChhHHH
Q 045902 424 IVYQGPREYVL 434 (1472)
Q Consensus 424 iv~~G~~~~~~ 434 (1472)
+++.|+++++.
T Consensus 216 ~~~~G~~~~~~ 226 (254)
T COG1121 216 LIASGPPEEVL 226 (254)
T ss_pred eEeccChhhcc
Confidence 88999998874
No 70
>COG1127 Ttg2A ABC-type transport system involved in resistance to organic solvents, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.9e-38 Score=336.01 Aligned_cols=209 Identities=25% Similarity=0.366 Sum_probs=178.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLH 258 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~ 258 (1472)
.+.||+|||+.|++||+++|+|||||||||||++|.|++.|+ +|+|.++|+++..... ++++|+++|+-.+
T Consensus 20 ~~~Ild~v~l~V~~Gei~~iiGgSGsGKStlLr~I~Gll~P~---~GeI~i~G~~i~~ls~~~~~~ir~r~GvlFQ~gAL 96 (263)
T COG1127 20 DRVILDGVDLDVPRGEILAILGGSGSGKSTLLRLILGLLRPD---KGEILIDGEDIPQLSEEELYEIRKRMGVLFQQGAL 96 (263)
T ss_pred CEEEecCceeeecCCcEEEEECCCCcCHHHHHHHHhccCCCC---CCeEEEcCcchhccCHHHHHHHHhheeEEeecccc
Confidence 457999999999999999999999999999999999999998 9999999999876643 3679999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccc-ccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDIC-ADIMV 337 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~-~dt~v 337 (1472)
|..|||+||+.|..+-... .|++.+++. +..-|+..||... +|
T Consensus 97 FssltV~eNVafplre~~~-------------------lp~~~i~~l--------------v~~KL~~VGL~~~~~~--- 140 (263)
T COG1127 97 FSSLTVFENVAFPLREHTK-------------------LPESLIREL--------------VLMKLELVGLRGAAAD--- 140 (263)
T ss_pred ccccchhHhhheehHhhcc-------------------CCHHHHHHH--------------HHHHHHhcCCChhhhh---
Confidence 9999999999996542211 122222211 1223567788754 44
Q ss_pred cCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEE
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDII 417 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ii 417 (1472)
.++..||||+|||+++|||++.+|+++|+||||+||||.++..+.++++++.+..+.|+++..|+ .++++..+|+++
T Consensus 141 --~~PsELSGGM~KRvaLARAialdPell~~DEPtsGLDPI~a~~~~~LI~~L~~~lg~T~i~VTHD-l~s~~~i~Drv~ 217 (263)
T COG1127 141 --LYPSELSGGMRKRVALARAIALDPELLFLDEPTSGLDPISAGVIDELIRELNDALGLTVIMVTHD-LDSLLTIADRVA 217 (263)
T ss_pred --hCchhhcchHHHHHHHHHHHhcCCCEEEecCCCCCCCcchHHHHHHHHHHHHHhhCCEEEEEECC-hHHHHhhhceEE
Confidence 56677999999999999999999999999999999999999999999999999999999987765 568999999999
Q ss_pred EecCCeEEEecChhHHHH
Q 045902 418 LLSEGEIVYQGPREYVLD 435 (1472)
Q Consensus 418 lL~~G~iv~~G~~~~~~~ 435 (1472)
+|.+|+|+.+|+++++.+
T Consensus 218 ~L~~gkv~~~Gt~~el~~ 235 (263)
T COG1127 218 VLADGKVIAEGTPEELLA 235 (263)
T ss_pred EEeCCEEEEeCCHHHHHh
Confidence 999999999999998854
No 71
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=6.6e-38 Score=366.65 Aligned_cols=210 Identities=28% Similarity=0.395 Sum_probs=180.9
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|++..+ +++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~i~~l~k~~-------------~~~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~--p~~G~v~i~G~~~ 71 (306)
T PRK13537 7 PIDFRNVEKRY-------------GDKLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTH--PDAGSISLCGEPV 71 (306)
T ss_pred eEEEEeEEEEE-------------CCeEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEec
Confidence 46777776554 23579999999999999999999999999999999999877 4589999999986
Q ss_pred Ch--hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHH
Q 045902 957 KQ--ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKR 1030 (1472)
Q Consensus 957 ~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqR 1030 (1472)
.. ...++.+||++|++.+++.+||+||+.|.+.++. +.. ..++++++.+++.+..++.+ ++||||||||
T Consensus 72 ~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr 146 (306)
T PRK13537 72 PSRARHARQRVGVVPQFDNLDPDFTVRENLLVFGRYFGLSAAAARALVPPLLEFAKLENKADAKV-----GELSGGMKRR 146 (306)
T ss_pred ccchHHHHhcEEEEeccCcCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchHhcCch-----hhCCHHHHHH
Confidence 43 2356789999999999999999999998666542 222 34667888888887777665 4799999999
Q ss_pred HHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1031 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1031 l~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
++||+||+++|++|||||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 147 l~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~~g~till~sH~l~-e~~~~~d~i~il~~-G~i~~~g~~ 222 (306)
T PRK13537 147 LTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLARGKTILLTTHFME-EAERLCDRLCVIEE-GRKIAEGAP 222 (306)
T ss_pred HHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 99999999999999999999999999999999999999877999999999986 57788999999985 799999985
No 72
>COG1116 TauB ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.3e-38 Score=342.62 Aligned_cols=194 Identities=27% Similarity=0.382 Sum_probs=169.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVR 265 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 265 (1472)
..+|+|+|+.|.+||+++|+||||||||||||+|+|+..|+ +|+|.++|.++. .|...++||+|++.++|.+||+
T Consensus 16 ~~vl~~i~L~v~~GEfvsilGpSGcGKSTLLriiAGL~~p~---~G~V~~~g~~v~--~p~~~~~~vFQ~~~LlPW~Tv~ 90 (248)
T COG1116 16 VEVLEDINLSVEKGEFVAILGPSGCGKSTLLRLIAGLEKPT---SGEVLLDGRPVT--GPGPDIGYVFQEDALLPWLTVL 90 (248)
T ss_pred eEEeccceeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCcccC--CCCCCEEEEeccCcccchhhHH
Confidence 57999999999999999999999999999999999999998 999999999883 3567799999999999999999
Q ss_pred HHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCC
Q 045902 266 ETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGI 345 (1472)
Q Consensus 266 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 345 (1472)
||+.|+....+... .+. ...++..|+..||....|.. +..|
T Consensus 91 ~NV~l~l~~~~~~~----------~e~------------------------~~~a~~~L~~VgL~~~~~~~-----P~qL 131 (248)
T COG1116 91 DNVALGLELRGKSK----------AEA------------------------RERAKELLELVGLAGFEDKY-----PHQL 131 (248)
T ss_pred hhheehhhccccch----------HhH------------------------HHHHHHHHHHcCCcchhhcC-----cccc
Confidence 99999877654211 111 01245688999999988855 4569
Q ss_pred ChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC--Ce
Q 045902 346 SGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE--GE 423 (1472)
Q Consensus 346 SGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~--G~ 423 (1472)
||||||||+|||||+.+|++|+||||+++||+.|+.++.+.|.++.+..+.|+++++|. -+|...++|||++|++ |+
T Consensus 132 SGGMrQRVaiARAL~~~P~lLLlDEPFgALDalTR~~lq~~l~~lw~~~~~TvllVTHd-i~EAv~LsdRivvl~~~P~~ 210 (248)
T COG1116 132 SGGMRQRVAIARALATRPKLLLLDEPFGALDALTREELQDELLRLWEETRKTVLLVTHD-VDEAVYLADRVVVLSNRPGR 210 (248)
T ss_pred ChHHHHHHHHHHHHhcCCCEEEEcCCcchhhHHHHHHHHHHHHHHHHhhCCEEEEEeCC-HHHHHhhhCEEEEecCCCcc
Confidence 99999999999999999999999999999999999999999999998888999987765 5688889999999998 44
Q ss_pred E
Q 045902 424 I 424 (1472)
Q Consensus 424 i 424 (1472)
|
T Consensus 211 i 211 (248)
T COG1116 211 I 211 (248)
T ss_pred e
Confidence 5
No 73
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.4e-38 Score=328.50 Aligned_cols=214 Identities=26% Similarity=0.373 Sum_probs=178.1
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCC---CCCeeEEEEEEc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGYIEGSISIS 952 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~---~~~~~~G~i~i~ 952 (1472)
..+..+|++.++ +.+++|+|||+.|+++++|||||||||||||||++|.... ++-.++|+|.++
T Consensus 6 ~~~~~~~l~~yY-------------g~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~ 72 (253)
T COG1117 6 PAIEVRDLNLYY-------------GDKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLD 72 (253)
T ss_pred ceeEecceeEEE-------------CchhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEEC
Confidence 346677777665 4578999999999999999999999999999999999853 334678999999
Q ss_pred CccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCch----HHHHHHHHHccccc-ccccccCCCCCCC
Q 045902 953 GYPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKD----MFVEEVMELVEMKA-LRNSLVGLPGVDG 1022 (1472)
Q Consensus 953 G~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~----~~~~~v~~~l~l~~-~~~~~~~~~~~~~ 1022 (1472)
|+++.. ...|+.+|+|+|.+.-|| +|++||+.|+.++....+ +.+|+.++...|.+ .+|++... ..+
T Consensus 73 g~ni~~~~~d~~~lRr~vGMVFQkPnPFp-~SIydNVayG~r~~g~~~~~ldeiVe~sLk~AaLWdEVKDrL~~s--a~~ 149 (253)
T COG1117 73 GKNIYDPKVDVVELRRRVGMVFQKPNPFP-MSIYDNVAYGLRLHGIKDKELDEIVESSLKKAALWDEVKDRLHKS--ALG 149 (253)
T ss_pred CeeccCCCCCHHHHHHHheeeccCCCCCC-chHHHHHHHhHHhhccchHHHHHHHHHHHHHhHhHHHhHHHhhCC--ccC
Confidence 987633 357889999999999999 999999999988765433 44566666655543 34444333 247
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
|||||+|||||||||+.+|+||+||||||+|||.+...|-++|.+|+ +.-|||++||.+. ......|+...+.. |++
T Consensus 150 LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk-~~yTIviVTHnmq-QAaRvSD~taFf~~-G~L 226 (253)
T COG1117 150 LSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELK-KKYTIVIVTHNMQ-QAARVSDYTAFFYL-GEL 226 (253)
T ss_pred CChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHH-hccEEEEEeCCHH-HHHHHhHhhhhhcc-cEE
Confidence 99999999999999999999999999999999999999999999997 4689999999976 46778899999985 799
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
+.+|+.
T Consensus 227 vE~g~T 232 (253)
T COG1117 227 VEFGPT 232 (253)
T ss_pred EEEcCH
Confidence 999985
No 74
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.5e-38 Score=380.54 Aligned_cols=210 Identities=24% Similarity=0.436 Sum_probs=180.4
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCC
Q 045902 184 RKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHG 260 (1472)
Q Consensus 184 ~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~ 260 (1472)
.+.+||+|+|++|+|||.+||+|||||||||+.++|-.+++|+ +|+|++||+|+.++++ ++.+|+|.|+|.+|.
T Consensus 479 p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~Pt---sG~IllDG~~i~~~~~~~lr~~Ig~V~QEPvLFs 555 (716)
T KOG0058|consen 479 PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYDPT---SGRILLDGVPISDINHKYLRRKIGLVGQEPVLFS 555 (716)
T ss_pred CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCeehhhcCHHHHHHHeeeeeccceeec
Confidence 3567999999999999999999999999999999999999998 9999999999999876 488999999999996
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
-||+|||.|+.. .. .++++..+.|.+.++ |. +.++++..||.|| |
T Consensus 556 -~sI~eNI~YG~~--~~--------------------t~e~i~~AAk~ANah--------~F---I~~~p~gY~T~VG-E 600 (716)
T KOG0058|consen 556 -GSIRENIAYGLD--NA--------------------TDEEIEAAAKMANAH--------EF---ITNFPDGYNTVVG-E 600 (716)
T ss_pred -ccHHHHHhcCCC--CC--------------------CHHHHHHHHHHhChH--------HH---HHhCccccccccC-C
Confidence 499999999743 10 123344444444333 22 2468889999999 6
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
++..||||||||++|||||+.+|+||||||.||+||+.+...+.+.|.+..+ ++||++.-|. -.+.+.+|+|++++
T Consensus 601 kG~qLSGGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~--~rTVlvIAHR--LSTV~~Ad~Ivvi~ 676 (716)
T KOG0058|consen 601 KGSQLSGGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ--GRTVLVIAHR--LSTVRHADQIVVID 676 (716)
T ss_pred ccccccchHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc--CCeEEEEehh--hhHhhhccEEEEEc
Confidence 7778999999999999999999999999999999999999999999998875 4788876654 46889999999999
Q ss_pred CCeEEEecChhHHHH
Q 045902 421 EGEIVYQGPREYVLD 435 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~~ 435 (1472)
+|++++.|+++|+++
T Consensus 677 ~G~V~E~G~h~eLl~ 691 (716)
T KOG0058|consen 677 KGRVVEMGTHDELLS 691 (716)
T ss_pred CCeEEecccHHHHhh
Confidence 999999999999875
No 75
>COG3839 MalK ABC-type sugar transport systems, ATPase components [Carbohydrate transport and metabolism]
Probab=100.00 E-value=3.3e-38 Score=362.68 Aligned_cols=196 Identities=30% Similarity=0.427 Sum_probs=177.7
Q ss_pred eeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHHHH
Q 045902 905 LLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIYES 983 (1472)
Q Consensus 905 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~ 983 (1472)
+|+|||++|+.||+++|+|||||||||||++|||+.. +.+|+|.|+|.+.+. ...+|.+++|+|+..+||+|||+||
T Consensus 18 ~l~~i~l~i~~Gef~vllGPSGcGKSTlLr~IAGLe~--~~~G~I~i~g~~vt~l~P~~R~iamVFQ~yALyPhmtV~~N 95 (338)
T COG3839 18 VLKDVNLDIEDGEFVVLLGPSGCGKSTLLRMIAGLEE--PTSGEILIDGRDVTDLPPEKRGIAMVFQNYALYPHMTVYEN 95 (338)
T ss_pred eeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhHCCEEEEeCCccccCCCcHHHH
Confidence 9999999999999999999999999999999999977 459999999998765 4456889999999999999999999
Q ss_pred HHHHHHcCCC-c---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 045902 984 LLYSAWLRLP-K---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1059 (1472)
Q Consensus 984 l~~~~~l~~~-~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~ 1059 (1472)
+.|+.+.+.. . +.+++++.+.|++.++.|+.. .+|||||||||+|||||+++|++++||||.|+||+..+.
T Consensus 96 iaf~Lk~~~~~k~ei~~rV~eva~~L~l~~lL~r~P-----~~LSGGQrQRVAlaRAlVr~P~v~L~DEPlSnLDa~lR~ 170 (338)
T COG3839 96 IAFGLKLRGVPKAEIDKRVKEVAKLLGLEHLLNRKP-----LQLSGGQRQRVALARALVRKPKVFLLDEPLSNLDAKLRV 170 (338)
T ss_pred hhhhhhhCCCchHHHHHHHHHHHHHcCChhHHhcCc-----ccCChhhHHHHHHHHHHhcCCCEEEecCchhHhhHHHHH
Confidence 9999888642 2 267889999999999988763 579999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1060 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1060 ~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
.+...|+++.++ |.|+|.+|||.. |...++||+++|. +|++...|++.
T Consensus 171 ~mr~ei~~lh~~l~~T~IYVTHDq~-EAmtladri~Vm~-~G~i~Q~g~p~ 219 (338)
T COG3839 171 LMRSEIKKLHERLGTTTIYVTHDQV-EAMTLADRIVVMN-DGRIQQVGTPL 219 (338)
T ss_pred HHHHHHHHHHHhcCCcEEEEcCCHH-HHHhhCCEEEEEe-CCeeeecCChH
Confidence 999999998765 899999999964 7888999999998 58999988764
No 76
>COG3842 PotA ABC-type spermidine/putrescine transport systems, ATPase components [Amino acid transport and metabolism]
Probab=100.00 E-value=2.6e-38 Score=365.44 Aligned_cols=201 Identities=27% Similarity=0.392 Sum_probs=178.9
Q ss_pred cccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCC
Q 045902 900 ENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 900 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~l 978 (1472)
+++..+|+|||++|++||+++|+|||||||||||++|||..+ +.+|+|.++|.++.. ...+|.+|+|+|+..+||+|
T Consensus 15 yg~~~av~~isl~i~~Gef~~lLGPSGcGKTTlLR~IAGfe~--p~~G~I~l~G~~i~~lpp~kR~ig~VFQ~YALFPHl 92 (352)
T COG3842 15 FGDFTAVDDISLDIKKGEFVTLLGPSGCGKTTLLRMIAGFEQ--PSSGEILLDGEDITDVPPEKRPIGMVFQSYALFPHM 92 (352)
T ss_pred cCCeeEEecceeeecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCChhhcccceeecCcccCCCC
Confidence 346789999999999999999999999999999999999987 458999999999765 34578899999999999999
Q ss_pred CHHHHHHHHHHcCC-Cc-h---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 979 TIYESLLYSAWLRL-PK-D---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~-~~-~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
||+||+.|+.+++. .. + ++++++++.++|.++.++. +..|||||||||+|||||+.+|++|+||||.|+|
T Consensus 93 tV~~NVafGLk~~~~~~~~~i~~rv~e~L~lV~L~~~~~R~-----p~qLSGGQqQRVALARAL~~~P~vLLLDEPlSaL 167 (352)
T COG3842 93 TVEENVAFGLKVRKKLKKAEIKARVEEALELVGLEGFADRK-----PHQLSGGQQQRVALARALVPEPKVLLLDEPLSAL 167 (352)
T ss_pred cHHHHhhhhhhhcCCCCHHHHHHHHHHHHHHcCchhhhhhC-----hhhhChHHHHHHHHHHHhhcCcchhhhcCcccch
Confidence 99999999988543 22 2 4678888888888887765 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1054 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
|..-+..+...|+++.++ |.|.|++|||.. +.+.+.||+++|++ |++...|++.
T Consensus 168 D~kLR~~mr~Elk~lq~~~giT~i~VTHDqe-EAl~msDrI~Vm~~-G~I~Q~gtP~ 222 (352)
T COG3842 168 DAKLREQMRKELKELQRELGITFVYVTHDQE-EALAMSDRIAVMND-GRIEQVGTPE 222 (352)
T ss_pred hHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HHhhhccceEEccC-CceeecCCHH
Confidence 999999999999999755 999999999976 78889999999985 7999989864
No 77
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=7.6e-38 Score=321.17 Aligned_cols=194 Identities=27% Similarity=0.405 Sum_probs=163.0
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQNDIHSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~~~~~ 976 (1472)
+.+|+||||.|++||++-|+||||||||||||+|.+... +..|+|.++|+++.. .-.+|.+|+|+||..+.+
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~--pt~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL~ 92 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEER--PTRGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLLP 92 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhc--CCCceEEECCeecccccccccchhhheeeeEeeeccccc
Confidence 569999999999999999999999999999999999766 458999999998642 235789999999999999
Q ss_pred CCCHHHHHHHHHHcCCC-chH---HHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 977 NVTIYESLLYSAWLRLP-KDM---FVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~~-~~~---~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
+.||+||+.|....... +++ ++.++++.+||.+-.+. .| ..|||||||||+||||++.+|++|+.||||-+
T Consensus 93 ~~tvyeNVA~pL~v~G~~~~~i~~rV~~~L~~VgL~~k~~~---lP--~~LSGGEQQRvaIARAiV~~P~vLlADEPTGN 167 (223)
T COG2884 93 DRTVYENVALPLRVIGKPPREIRRRVSEVLDLVGLKHKARA---LP--SQLSGGEQQRVAIARAIVNQPAVLLADEPTGN 167 (223)
T ss_pred cchHhhhhhhhhhccCCCHHHHHHHHHHHHHHhccchhhhc---Cc--cccCchHHHHHHHHHHHccCCCeEeecCCCCC
Confidence 99999999998776543 333 44555555555554443 33 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhh-CeEEEEecCcEEEEEc
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF-DELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~-D~v~~l~~gg~v~~~g 1106 (1472)
|||..+..|++++.++.+.|.|||+.||+. ++.+.+ -+++.|.+ |+++.+.
T Consensus 168 LDp~~s~~im~lfeeinr~GtTVl~ATHd~--~lv~~~~~rvl~l~~-Grl~~d~ 219 (223)
T COG2884 168 LDPDLSWEIMRLFEEINRLGTTVLMATHDL--ELVNRMRHRVLALED-GRLVRDE 219 (223)
T ss_pred CChHHHHHHHHHHHHHhhcCcEEEEEeccH--HHHHhccCcEEEEeC-CEEEecc
Confidence 999999999999999999999999999984 466655 56777765 7877654
No 78
>COG4555 NatA ABC-type Na+ transport system, ATPase component [Energy production and conversion / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.9e-38 Score=325.63 Aligned_cols=207 Identities=30% Similarity=0.354 Sum_probs=182.7
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~l 262 (1472)
..++++||||.++.||+++|+|||||||||+|++|++++.|+ +|+|++||.+....+ .++.+|.++.+.-++..|
T Consensus 14 ~v~AvrdVSF~ae~Gei~GlLG~NGAGKTT~LRmiatlL~P~---~G~v~idg~d~~~~p~~vrr~IGVl~~e~glY~Rl 90 (245)
T COG4555 14 KVQAVRDVSFEAEEGEITGLLGENGAGKTTLLRMIATLLIPD---SGKVTIDGVDTVRDPSFVRRKIGVLFGERGLYARL 90 (245)
T ss_pred HHhhhhheeEEeccceEEEEEcCCCCCchhHHHHHHHhccCC---CceEEEeecccccChHHHhhhcceecCCcChhhhh
Confidence 345899999999999999999999999999999999999998 999999999876543 357899999888999999
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++|||.|.+++.+. ++.+. +..++.+.+.|+|..|.|+.+|+
T Consensus 91 T~rEnl~~Fa~L~~l----------~~~~~------------------------kari~~l~k~l~l~~~~~rRv~~--- 133 (245)
T COG4555 91 TARENLKYFARLNGL----------SRKEI------------------------KARIAELSKRLQLLEYLDRRVGE--- 133 (245)
T ss_pred hHHHHHHHHHHHhhh----------hhhHH------------------------HHHHHHHHHHhChHHHHHHHHhh---
Confidence 999999998876543 22211 11356788999999999999986
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
+|-|+||||+|||||+.+|+++++||||||||..+...+.+.++++.. .|+++|.+.| ..+|+..+||+|++|++|
T Consensus 134 --~S~G~kqkV~iARAlvh~P~i~vlDEP~sGLDi~~~r~~~dfi~q~k~-egr~viFSSH-~m~EvealCDrvivlh~G 209 (245)
T COG4555 134 --FSTGMKQKVAIARALVHDPSILVLDEPTSGLDIRTRRKFHDFIKQLKN-EGRAVIFSSH-IMQEVEALCDRVIVLHKG 209 (245)
T ss_pred --hchhhHHHHHHHHHHhcCCCeEEEcCCCCCccHHHHHHHHHHHHHhhc-CCcEEEEecc-cHHHHHHhhheEEEEecC
Confidence 999999999999999999999999999999999999999999999865 6889998875 577999999999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
++|+.|+.+++..
T Consensus 210 evv~~gs~~~l~~ 222 (245)
T COG4555 210 EVVLEGSIEALDA 222 (245)
T ss_pred cEEEcCCHHHHHH
Confidence 9999999987754
No 79
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=5e-37 Score=361.91 Aligned_cols=206 Identities=25% Similarity=0.347 Sum_probs=177.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+++|+|+|+++++||+++|+||||||||||+++|+|..+|+ +|+|.++|+++....+ ++.++|++|+..++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~p~---~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~ 94 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLERPT---SGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEECCcccc
Confidence 46999999999999999999999999999999999999997 8999999999876532 45799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||+||+.|.....+.. +.+ . ...+..+++.+||++..|..++
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~~~----------~--------------~~~v~e~l~~vgL~~~~~~~~~- 139 (343)
T TIGR02314 95 SSRTVFGNVALPLELDNTP----------KDE----------I--------------KRKVTELLALVGLGDKHDSYPS- 139 (343)
T ss_pred ccCcHHHHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHHcCCchhhhCChh-
Confidence 9999999998865432210 000 0 0123567889999988886665
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|+. +.+.++||+|++|
T Consensus 140 ----~LSgGqkQRV~IARAL~~~P~iLLlDEPts~LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~-~~v~~~~d~v~vl 214 (343)
T TIGR02314 140 ----NLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTQSILELLKEINRRLGLTILLITHEM-DVVKRICDCVAVI 214 (343)
T ss_pred ----hCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 49999999999999999999999999999999999999999999999876688999887764 5778899999999
Q ss_pred cCCeEEEecChhHHH
Q 045902 420 SEGEIVYQGPREYVL 434 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~ 434 (1472)
++|++++.|+.+++.
T Consensus 215 ~~G~iv~~g~~~~v~ 229 (343)
T TIGR02314 215 SNGELIEQGTVSEIF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999998873
No 80
>COG1117 PstB ABC-type phosphate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.6e-37 Score=324.27 Aligned_cols=223 Identities=26% Similarity=0.413 Sum_probs=178.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCeeCCCCC-----CCceEEEEcCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD--KSLRVSGRVTYCGHELTEFV-----PQRTCAYISQHDL 257 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~ 257 (1472)
.+++|+|||+.|+++++||++|||||||||||++|....+ +..+++|+|.++|+++.+.. .++.+|+|+|.+.
T Consensus 19 ~~~aL~~i~l~i~~~~VTAlIGPSGcGKST~LR~lNRmndl~~~~r~~G~v~~~g~ni~~~~~d~~~lRr~vGMVFQkPn 98 (253)
T COG1117 19 DKHALKDINLDIPKNKVTALIGPSGCGKSTLLRCLNRMNDLIPGARVEGEVLLDGKNIYDPKVDVVELRRRVGMVFQKPN 98 (253)
T ss_pred chhhhccCceeccCCceEEEECCCCcCHHHHHHHHHhhcccCcCceEEEEEEECCeeccCCCCCHHHHHHHheeeccCCC
Confidence 3569999999999999999999999999999999998644 45688999999999986542 3588999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMV 337 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 337 (1472)
-|| +|++||+.|+.+..|... +.+. +.++...+.+++. |++-+.|
T Consensus 99 PFp-~SIydNVayG~r~~g~~~--~~ld--------------eiVe~sLk~AaLW--------dEVKDrL---------- 143 (253)
T COG1117 99 PFP-MSIYDNVAYGLRLHGIKD--KELD--------------EIVESSLKKAALW--------DEVKDRL---------- 143 (253)
T ss_pred CCC-chHHHHHHHhHHhhccch--HHHH--------------HHHHHHHHHhHhH--------HHhHHHh----------
Confidence 999 999999999998877543 1111 1122222333322 1121111
Q ss_pred cCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEE
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDII 417 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ii 417 (1472)
++...+|||||+||++|||||+-+|+||+||||||+|||.++..|-+++.++.+ +-|||+..|. .....+..|+..
T Consensus 144 -~~sa~~LSGGQQQRLcIARalAv~PeVlLmDEPtSALDPIsT~kIEeLi~eLk~--~yTIviVTHn-mqQAaRvSD~ta 219 (253)
T COG1117 144 -HKSALGLSGGQQQRLCIARALAVKPEVLLMDEPTSALDPISTLKIEELITELKK--KYTIVIVTHN-MQQAARVSDYTA 219 (253)
T ss_pred -hCCccCCChhHHHHHHHHHHHhcCCcEEEecCcccccCchhHHHHHHHHHHHHh--ccEEEEEeCC-HHHHHHHhHhhh
Confidence 133456999999999999999999999999999999999999999999999974 5788877654 567889999999
Q ss_pred EecCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 045902 418 LLSEGEIVYQGPREYVLDFFESVGFRCPERKGAADFL 454 (1472)
Q Consensus 418 lL~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl 454 (1472)
.+..|++|++|+.+++ |..|.++.+.||+
T Consensus 220 Ff~~G~LvE~g~T~~i--------F~~P~~~~TedYi 248 (253)
T COG1117 220 FFYLGELVEFGPTDKI--------FTNPKHKRTEDYI 248 (253)
T ss_pred hhcccEEEEEcCHHhh--------hcCccHHHHHHHh
Confidence 9999999999999887 4557777666665
No 81
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=1.6e-37 Score=315.77 Aligned_cols=201 Identities=24% Similarity=0.411 Sum_probs=177.2
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCHHHHHH
Q 045902 191 DVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTVRETLD 269 (1472)
Q Consensus 191 ~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 269 (1472)
.+++.|.+||+++|+||||||||||||+|+|+..|. +|+|.+||++.+...| +|-++.++|+.++|..+||.+|+.
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P~---~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNig 93 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETPA---SGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIG 93 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCCC---CceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhc
Confidence 478899999999999999999999999999999997 9999999999987766 478999999999999999999998
Q ss_pred HhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHH
Q 045902 270 FSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQ 349 (1472)
Q Consensus 270 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGq 349 (1472)
++.. ++-+ +...++ ..++.++...||..+.+.+.+. |||||
T Consensus 94 LGl~---P~Lk------L~a~~r-------------------------~~v~~aa~~vGl~~~~~RLP~~-----LSGGq 134 (231)
T COG3840 94 LGLS---PGLK------LNAEQR-------------------------EKVEAAAAQVGLAGFLKRLPGE-----LSGGQ 134 (231)
T ss_pred ccCC---cccc------cCHHHH-------------------------HHHHHHHHHhChhhHhhhCccc-----cCchH
Confidence 7642 1111 111111 1246678899999999887765 99999
Q ss_pred HHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEecC
Q 045902 350 KKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQGP 429 (1472)
Q Consensus 350 rkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G~ 429 (1472)
||||++||+|+.+-+||+||||+|+||+.-+.++...+.+++.+++.|+++..|||. +...++|+++++++|+|.++|+
T Consensus 135 RQRvALARclvR~~PilLLDEPFsALdP~LR~eMl~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~Gri~~~g~ 213 (231)
T COG3840 135 RQRVALARCLVREQPILLLDEPFSALDPALRAEMLALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDNGRIAAQGS 213 (231)
T ss_pred HHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHHHHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeCCEEEeecc
Confidence 999999999999999999999999999999999999999999999999999999986 7889999999999999999999
Q ss_pred hhHHH
Q 045902 430 REYVL 434 (1472)
Q Consensus 430 ~~~~~ 434 (1472)
.++..
T Consensus 214 ~~~~~ 218 (231)
T COG3840 214 TQELL 218 (231)
T ss_pred HHHHh
Confidence 88764
No 82
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=3.3e-37 Score=389.31 Aligned_cols=207 Identities=29% Similarity=0.461 Sum_probs=178.2
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 263 (1472)
.+|+|+|++|+|||.++|+|+||||||||+|+|+|++.|. +|+|.+||+++++..+ ++.++||+|++.+|. -|
T Consensus 487 ~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~p~---~G~I~~dg~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gS 562 (709)
T COG2274 487 PVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYKPQ---QGRILLDGVDLNDIDLASLRRQVGYVLQDPFLFS-GS 562 (709)
T ss_pred chhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEeHHhcCHHHHHhheeEEcccchhhc-Cc
Confidence 6899999999999999999999999999999999999998 9999999999988765 588999999988885 69
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.++.. +...++.++|+.+.|. .+. +..++...||.|| |++.
T Consensus 563 I~eNi~l~~p-------------------------~~~~e~i~~A~~~ag~-----~~f---I~~lP~gy~t~v~-E~G~ 608 (709)
T COG2274 563 IRENIALGNP-------------------------EATDEEIIEAAQLAGA-----HEF---IENLPMGYDTPVG-EGGA 608 (709)
T ss_pred HHHHHhcCCC-------------------------CCCHHHHHHHHHHhCc-----HHH---HHhcccccccccc-cCCC
Confidence 9999987532 1122233333333332 122 3457888899999 7889
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
+||||||||++|||||+++|+||+||||||+||+.++..|.+.|+++. .++|+|+..|.+ .+.+.+|+|++|++|+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~--~~~T~I~IaHRl--~ti~~adrIiVl~~Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL--QGRTVIIIAHRL--STIRSADRIIVLDQGK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh--cCCeEEEEEccc--hHhhhccEEEEccCCc
Confidence 999999999999999999999999999999999999999999999986 468998888866 5889999999999999
Q ss_pred EEEecChhHHHH
Q 045902 424 IVYQGPREYVLD 435 (1472)
Q Consensus 424 iv~~G~~~~~~~ 435 (1472)
++.+|+++++++
T Consensus 685 iv~~gs~~ell~ 696 (709)
T COG2274 685 IVEQGSHEELLA 696 (709)
T ss_pred eeccCCHHHHHH
Confidence 999999999976
No 83
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=9.2e-37 Score=360.50 Aligned_cols=211 Identities=24% Similarity=0.362 Sum_probs=180.7
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
..+.++|++..+ +++.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+
T Consensus 40 ~~i~i~nl~k~y-------------~~~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p--~~G~i~i~G~~ 104 (340)
T PRK13536 40 VAIDLAGVSKSY-------------GDKAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSP--DAGKITVLGVP 104 (340)
T ss_pred eeEEEEEEEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCC--CceEEEECCEE
Confidence 357788887654 235799999999999999999999999999999999998774 58999999998
Q ss_pred CCh--hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHH
Q 045902 956 KKQ--ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRK 1029 (1472)
Q Consensus 956 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrq 1029 (1472)
... ...++.+||++|+..+++.+||.|++.+.+..+. +.. ...+++++.+++.+..++.+ ..|||||||
T Consensus 105 ~~~~~~~~~~~ig~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~LS~G~kq 179 (340)
T PRK13536 105 VPARARLARARIGVVPQFDNLDLEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADARV-----SDLSGGMKR 179 (340)
T ss_pred CCcchHHHhccEEEEeCCccCCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhCCCh-----hhCCHHHHH
Confidence 643 2346779999999999999999999987655432 211 34567788888887777664 479999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1030 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1030 Rl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|++||+||+++|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 180 rv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~~g~tilisSH~l~-e~~~~~d~i~il~~-G~i~~~g~~ 256 (340)
T PRK13536 180 RLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLEA-GRKIAEGRP 256 (340)
T ss_pred HHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 999999999999999999999999999999999999999878999999999986 57789999999985 799999986
No 84
>TIGR02314 ABC_MetN D-methionine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of the D-methionine ABC transporter complex. Known members belong to the Proteobacteria.
Probab=100.00 E-value=8.4e-37 Score=360.00 Aligned_cols=197 Identities=26% Similarity=0.358 Sum_probs=170.4
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---h---cccceeEEeccCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---E---TFARISGYCEQNDIHSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~---~~~~~~gyv~Q~~~~~~ 976 (1472)
..+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. . ..++.+||++|+..+++
T Consensus 18 ~~~L~~vsl~i~~Gei~gIiG~sGaGKSTLlr~I~gl~~--p~~G~I~i~G~~i~~~~~~~l~~~r~~Ig~v~Q~~~l~~ 95 (343)
T TIGR02314 18 IQALNNVSLHVPAGQIYGVIGASGAGKSTLIRCVNLLER--PTSGSVIVDGQDLTTLSNSELTKARRQIGMIFQHFNLLS 95 (343)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECCcCCHHHHHHHhcCEEEEECCccccc
Confidence 469999999999999999999999999999999999877 458999999987643 1 23567999999999999
Q ss_pred CCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 977 NVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
..||+||+.+..... .+.. +.+.++++.+++.+..|... ..|||||||||+|||||+.+|++|+|||||||
T Consensus 96 ~~tv~eni~~~~~~~~~~~~~~~~~v~e~l~~vgL~~~~~~~~-----~~LSgGqkQRV~IARAL~~~P~iLLlDEPts~ 170 (343)
T TIGR02314 96 SRTVFGNVALPLELDNTPKDEIKRKVTELLALVGLGDKHDSYP-----SNLSGGQKQRVAIARALASNPKVLLCDEATSA 170 (343)
T ss_pred cCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCccc
Confidence 999999999876543 2222 34667788888877766543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1053 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+.++..+++.|+++.++ |.|||++||+++ .+.+.||++++|++ |+++..|+.
T Consensus 171 LD~~t~~~i~~lL~~l~~~~g~tiiliTH~~~-~v~~~~d~v~vl~~-G~iv~~g~~ 225 (343)
T TIGR02314 171 LDPATTQSILELLKEINRRLGLTILLITHEMD-VVKRICDCVAVISN-GELIEQGTV 225 (343)
T ss_pred CCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 9999999999999999865 999999999976 46788999999985 799999985
No 85
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7e-37 Score=363.71 Aligned_cols=206 Identities=24% Similarity=0.341 Sum_probs=178.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|..+++ +|+|.++|.++....+ ++.++||+|++.++|++||
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLERIT---SGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSV 93 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCH
Confidence 46999999999999999999999999999999999999987 9999999999876544 3689999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.|+.+..+.. +.+. ...++.+++.+||++..|..+. .
T Consensus 94 ~eNi~~~~~~~~~~----------~~~~------------------------~~~~~~~l~~~gL~~~~~~~~~-----~ 134 (356)
T PRK11650 94 RENMAYGLKIRGMP----------KAEI------------------------EERVAEAARILELEPLLDRKPR-----E 134 (356)
T ss_pred HHHHHhHHhhcCCC----------HHHH------------------------HHHHHHHHHHcCChhHhhCChh-----h
Confidence 99999976532210 0000 0124568899999988887665 4
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+|||||+.+|++|+|||||++||+.++.++.+.|+++.+..+.|+|++.|++ .++.+++|+|++|++|++
T Consensus 135 LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~-~ea~~l~D~i~vl~~G~i 213 (356)
T PRK11650 135 LSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKLRVQMRLEIQRLHRRLKTTSLYVTHDQ-VEAMTLADRVVVMNGGVA 213 (356)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEeCCEE
Confidence 9999999999999999999999999999999999999999999999876688998888765 578999999999999999
Q ss_pred EEecChhHHH
Q 045902 425 VYQGPREYVL 434 (1472)
Q Consensus 425 v~~G~~~~~~ 434 (1472)
+..|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (356)
T PRK11650 214 EQIGTPVEVY 223 (356)
T ss_pred EEECCHHHHH
Confidence 9999998874
No 86
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-37 Score=345.78 Aligned_cols=197 Identities=25% Similarity=0.394 Sum_probs=168.0
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQNDIHSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~~~~~ 976 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRP--DSGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALFD 90 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEccccChhhHHHHhcceEEEccCcccCC
Confidence 4699999999999999999999999999999999998763 58999999987532 234567999999999999
Q ss_pred CCCHHHHHHHHHHcC--CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 045902 977 NVTIYESLLYSAWLR--LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1051 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~--~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTs 1051 (1472)
.+||.||+.+..... .+.+ ..++++++.+++.+..++.+ ..|||||||||+||+||+.+|++|+|||||+
T Consensus 91 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ia~al~~~p~llllDEPt~ 165 (235)
T cd03261 91 SLTVFENVAFPLREHTRLSEEEIREIVLEKLEAVGLRGAEDLYP-----AELSGGMKKRVALARALALDPELLLYDEPTA 165 (235)
T ss_pred CCcHHHHHHHHHhhccCCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCcc
Confidence 999999998864422 1221 34567788888876655543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1052 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |++++.|+.
T Consensus 166 ~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 221 (235)
T cd03261 166 GLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVLYD-GKIVAEGTP 221 (235)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEEEC-CeEEEecCH
Confidence 99999999999999999874 899999999976 46778999999985 788888875
No 87
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=6.7e-37 Score=358.48 Aligned_cols=198 Identities=28% Similarity=0.411 Sum_probs=172.7
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 5 ~~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 5 DFKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLR--PTSGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred CeeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 4579999999999999999999999999999999999877 458999999987643 234567999999999999999
Q ss_pred HHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 045902 980 IYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1055 (1472)
Q Consensus 980 v~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~ 1055 (1472)
|+|++.+.+.++. +. ...++++++.+++.+..++.+ ..|||||||||+||+||+++|++|+|||||+|||+
T Consensus 83 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~ 157 (302)
T TIGR01188 83 GRENLEMMGRLYGLPKDEAEERAEELLELFELGEAADRPV-----GTYSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDP 157 (302)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhCCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCH
Confidence 9999998766542 21 235678889999887776654 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1056 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1056 ~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 158 ~~~~~l~~~l~~~~~~g~tvi~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 208 (302)
T TIGR01188 158 RTRRAIWDYIRALKEEGVTILLTTHYME-EADKLCDRIAIIDH-GRIIAEGTP 208 (302)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 9999999999999877999999999976 57788999999985 789998875
No 88
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.2e-36 Score=361.15 Aligned_cols=206 Identities=27% Similarity=0.418 Sum_probs=179.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+.+|+|+|+++++||+++|+|||||||||||++|+|+.+|+ +|+|.++|+++....+ +|.++||+|+..+||.+||
T Consensus 17 ~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~p~---~G~I~i~g~~~~~~~~~~r~ig~v~Q~~~lfp~~tv 93 (353)
T TIGR03265 17 FTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLERQT---AGTIYQGGRDITRLPPQKRDYGIVFQSYALFPNLTV 93 (353)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCcH
Confidence 45899999999999999999999999999999999999987 9999999999876544 4679999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.|+.+.++.. +.+. ...++.+++.+||++..|..+. .
T Consensus 94 ~eNi~~~~~~~~~~----------~~~~------------------------~~~~~~~l~~l~L~~~~~~~~~-----~ 134 (353)
T TIGR03265 94 ADNIAYGLKNRGMG----------RAEV------------------------AERVAELLDLVGLPGSERKYPG-----Q 134 (353)
T ss_pred HHHHHHHHHhcCCC----------HHHH------------------------HHHHHHHHHHcCCCchhhCChh-----h
Confidence 99999975432210 0000 0124668999999998887665 4
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+|||||+.+|++++||||+++||..++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 135 LSgGq~QRvaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~-~ea~~l~d~i~vl~~G~i 213 (353)
T TIGR03265 135 LSGGQQQRVALARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQ-EEALSMADRIVVMNHGVI 213 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999877788998888765 488999999999999999
Q ss_pred EEecChhHHH
Q 045902 425 VYQGPREYVL 434 (1472)
Q Consensus 425 v~~G~~~~~~ 434 (1472)
++.|+++++.
T Consensus 214 ~~~g~~~~~~ 223 (353)
T TIGR03265 214 EQVGTPQEIY 223 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 89
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-36 Score=359.73 Aligned_cols=206 Identities=25% Similarity=0.383 Sum_probs=178.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|+.+++ +|+|.++|.++....+ ++.++||+|+..++|++||
T Consensus 19 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~~tv 95 (351)
T PRK11432 19 NTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEKPT---EGQIFIDGEDVTHRSIQQRDICMVFQSYALFPHMSL 95 (351)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCcccCCCCCH
Confidence 45899999999999999999999999999999999999998 9999999999876555 3789999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.|+.+.++... .+ . ...++++++.+||.+..|..+. .
T Consensus 96 ~eNi~~~l~~~~~~~----------~~----------~--------------~~~v~~~l~~~gl~~~~~r~~~-----~ 136 (351)
T PRK11432 96 GENVGYGLKMLGVPK----------EE----------R--------------KQRVKEALELVDLAGFEDRYVD-----Q 136 (351)
T ss_pred HHHHHHHHhHcCCCH----------HH----------H--------------HHHHHHHHHHcCCchhhcCChh-----h
Confidence 999999765332110 00 0 0124568889999888776654 5
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+.|+|++.|++ .++.+++|+|++|++|++
T Consensus 137 LSgGq~QRVaLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~-~e~~~laD~i~vm~~G~i 215 (351)
T PRK11432 137 ISGGQQQRVALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQ-SEAFAVSDTVIVMNKGKI 215 (351)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876688988887665 578899999999999999
Q ss_pred EEecChhHHH
Q 045902 425 VYQGPREYVL 434 (1472)
Q Consensus 425 v~~G~~~~~~ 434 (1472)
+..|+++++.
T Consensus 216 ~~~g~~~~~~ 225 (351)
T PRK11432 216 MQIGSPQELY 225 (351)
T ss_pred EEEcCHHHHH
Confidence 9999998873
No 90
>TIGR03265 PhnT2 putative 2-aminoethylphosphonate ABC transporter, ATP-binding protein. This ABC transporter ATP-binding protein is found in a number of genomes in operon-like contexts strongly suggesting a substrate specificity for 2-aminoethylphosphonate (2-AEP). The characterized PhnSTUV system is absent in the genomes in which this system is found. These genomes encode systems for the catabolism of 2-AEP, making the need for a 2-AEP-specific transporter likely.
Probab=100.00 E-value=1.6e-36 Score=360.27 Aligned_cols=210 Identities=26% Similarity=0.393 Sum_probs=181.1
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|++..+ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~l~GpsGsGKSTLLr~iaGl~~--p~~G~I~i~g~~~~ 69 (353)
T TIGR03265 5 LSIDNIRKRF-------------GAFTALKDISLSVKKGEFVCLLGPSGCGKTTLLRIIAGLER--QTAGTIYQGGRDIT 69 (353)
T ss_pred EEEEEEEEEe-------------CCeEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCC--CCceEEEECCEECC
Confidence 6677776554 23569999999999999999999999999999999999877 45899999998764
Q ss_pred h-hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHH
Q 045902 958 Q-ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLT 1032 (1472)
Q Consensus 958 ~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~ 1032 (1472)
. ...+|.+|||+|+..++|++||+||+.|....+. +. ...++++++.+++.++.++.. ..|||||||||+
T Consensus 70 ~~~~~~r~ig~v~Q~~~lfp~~tv~eNi~~~~~~~~~~~~~~~~~~~~~l~~l~L~~~~~~~~-----~~LSgGq~QRva 144 (353)
T TIGR03265 70 RLPPQKRDYGIVFQSYALFPNLTVADNIAYGLKNRGMGRAEVAERVAELLDLVGLPGSERKYP-----GQLSGGQQQRVA 144 (353)
T ss_pred CCCHHHCCEEEEeCCcccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCchhhCCh-----hhCCHHHHHHHH
Confidence 3 2345779999999999999999999999865432 22 246788899999988877653 479999999999
Q ss_pred HHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1033 IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1033 iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
|||||+.+|++|+||||||+||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++..|+..
T Consensus 145 LARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~~~tvi~vTHd~~-ea~~l~d~i~vl~~-G~i~~~g~~~ 220 (353)
T TIGR03265 145 LARALATSPGLLLLDEPLSALDARVREHLRTEIRQLQRRLGVTTIMVTHDQE-EALSMADRIVVMNH-GVIEQVGTPQ 220 (353)
T ss_pred HHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 999999999999999999999999999999999999765 899999999986 67889999999985 7899999863
No 91
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=1.8e-36 Score=336.47 Aligned_cols=195 Identities=29% Similarity=0.411 Sum_probs=168.0
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
+.+|+|+||++++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIK--PDSGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTAR 90 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCCcccchHHHHhhEEEecCCCccCccCcHH
Confidence 569999999999999999999999999999999999876 458999999987543 23456789999999889999999
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHH
Q 045902 982 ESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1061 (1472)
Q Consensus 982 e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i 1061 (1472)
||+.+....+...+..++++++.+++.+..++.. ..|||||||||+||++|+.+|++|+|||||+|||+.++..+
T Consensus 91 e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l 165 (208)
T cd03268 91 ENLRLLARLLGIRKKRIDEVLDVVGLKDSAKKKV-----KGFSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKEL 165 (208)
T ss_pred HHHHHHHHhcCCcHHHHHHHHHHcCCHHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHH
Confidence 9998765433223456778889998887766553 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1062 MRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1062 ~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|
T Consensus 166 ~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-g~i~~~g 208 (208)
T cd03268 166 RELILSLRDQGITVLISSHLLS-EIQKVADRIGIINK-GKLIEEG 208 (208)
T ss_pred HHHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 9999999877899999999976 46678999999985 6887654
No 92
>PRK11432 fbpC ferric transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-36 Score=358.54 Aligned_cols=211 Identities=25% Similarity=0.398 Sum_probs=180.8
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|++..+ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 6 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 70 (351)
T PRK11432 6 FVVLKNITKRF-------------GSNTVIDNLNLTIKQGTMVTLLGPSGCGKTTVLRLVAGLEK--PTEGQIFIDGEDV 70 (351)
T ss_pred EEEEEeEEEEE-------------CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEEC
Confidence 46677776554 23569999999999999999999999999999999999987 4589999999886
Q ss_pred Chh-cccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHH
Q 045902 957 KQE-TFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRL 1031 (1472)
Q Consensus 957 ~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl 1031 (1472)
... ..+|.+|||+|+..++|++||+||+.|....+. +.. +.++++++.+++.++.++.. ..|||||||||
T Consensus 71 ~~~~~~~r~ig~vfQ~~~lfp~~tv~eNi~~~l~~~~~~~~~~~~~v~~~l~~~gl~~~~~r~~-----~~LSgGq~QRV 145 (351)
T PRK11432 71 THRSIQQRDICMVFQSYALFPHMSLGENVGYGLKMLGVPKEERKQRVKEALELVDLAGFEDRYV-----DQISGGQQQRV 145 (351)
T ss_pred CCCCHHHCCEEEEeCCcccCCCCCHHHHHHHHHhHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHH
Confidence 432 235789999999999999999999999876542 222 45678888888887776553 47999999999
Q ss_pred HHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1032 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1032 ~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 146 aLARaL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-e~~~laD~i~vm~~-G~i~~~g~~~ 222 (351)
T PRK11432 146 ALARALILKPKVLLFDEPLSNLDANLRRSMREKIRELQQQFNITSLYVTHDQS-EAFAVSDTVIVMNK-GKIMQIGSPQ 222 (351)
T ss_pred HHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999999999999999999999999999765 899999999986 67889999999985 7899999863
No 93
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=2.6e-36 Score=357.63 Aligned_cols=208 Identities=21% Similarity=0.308 Sum_probs=179.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEcCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYISQHDL 257 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 257 (1472)
.+.+|+|+|+.|++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++....+ ++.++||+|++.
T Consensus 5 ~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~p~---~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 5 GKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIEPT---AGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 356899999999999999999999999999999999999997 9999999999876544 467999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMV 337 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 337 (1472)
++|++||+||+.|..+..+... .+. ...+..+++.+||++..++.+
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~----------~~~------------------------~~~~~~~l~~vgL~~~~~~~p 127 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPE----------QER------------------------KEKALELLKLVGLEEYEHRYP 127 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCH----------HHH------------------------HHHHHHHHHhcCCchhhhCCh
Confidence 9999999999998755432110 000 012356788999988877766
Q ss_pred cCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEE
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDII 417 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ii 417 (1472)
++ |||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++|+|++.|+. .++..++|+|+
T Consensus 128 ~~-----LSGGq~QRV~lARAL~~~p~iLLlDEP~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~-~ea~~~~drI~ 201 (363)
T TIGR01186 128 DE-----LSGGMQQRVGLARALAAEPDILLMDEAFSALDPLIRDSMQDELKKLQATLQKTIVFITHDL-DEAIRIGDRIV 201 (363)
T ss_pred hh-----CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEE
Confidence 54 9999999999999999999999999999999999999999999999776688988887664 57889999999
Q ss_pred EecCCeEEEecChhHHHH
Q 045902 418 LLSEGEIVYQGPREYVLD 435 (1472)
Q Consensus 418 lL~~G~iv~~G~~~~~~~ 435 (1472)
+|++|+++..|+++++..
T Consensus 202 vl~~G~iv~~g~~~ei~~ 219 (363)
T TIGR01186 202 IMKAGEIVQVGTPDEILR 219 (363)
T ss_pred EEeCCEEEeeCCHHHHHh
Confidence 999999999999988753
No 94
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=1e-36 Score=337.71 Aligned_cols=192 Identities=30% Similarity=0.404 Sum_probs=163.3
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCC-CCCCCCHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDI-HSPNVTIY 981 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~-~~~~lTv~ 981 (1472)
+.+|+|+||++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+......++.+||++|++. .+...|+.
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv~ 90 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIK--ESSGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSVR 90 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEhhhHHhhcceEEEecChhhhhhhccHH
Confidence 469999999999999999999999999999999999876 458999999987654445567999999974 34467999
Q ss_pred HHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHH
Q 045902 982 ESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIV 1061 (1472)
Q Consensus 982 e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i 1061 (1472)
||+.+...........++++++.+++.+..++.. ..||||||||++|||+|+.+|++|+|||||+|||+.++..+
T Consensus 91 e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l 165 (205)
T cd03226 91 EELLLGLKELDAGNEQAETVLKDLDLYALKERHP-----LSLSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERV 165 (205)
T ss_pred HHHhhhhhhcCccHHHHHHHHHHcCCchhcCCCc-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHH
Confidence 9998765433222346778889999887666543 47999999999999999999999999999999999999999
Q ss_pred HHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1062 MRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1062 ~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
.+.|++++++|+|||++||+++ ++.+.+|++++|++ |+++
T Consensus 166 ~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~iv 205 (205)
T cd03226 166 GELIRELAAQGKAVIVITHDYE-FLAKVCDRVLLLAN-GAIV 205 (205)
T ss_pred HHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEC
Confidence 9999999877999999999976 46678999999986 5653
No 95
>PRK11650 ugpC glycerol-3-phosphate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-36 Score=361.95 Aligned_cols=198 Identities=26% Similarity=0.362 Sum_probs=173.2
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+|||+|++.++|++||+
T Consensus 17 ~~~l~~vsl~i~~Ge~~~llG~sGsGKSTLLr~iaGl~~--p~~G~I~~~g~~i~~~~~~~r~ig~v~Q~~~lfp~~tv~ 94 (356)
T PRK11650 17 TQVIKGIDLDVADGEFIVLVGPSGCGKSTLLRMVAGLER--ITSGEIWIGGRVVNELEPADRDIAMVFQNYALYPHMSVR 94 (356)
T ss_pred CEEEeeeeEEEcCCCEEEEECCCCCcHHHHHHHHHCCCC--CCceEEEECCEECCCCCHHHCCEEEEeCCccccCCCCHH
Confidence 569999999999999999999999999999999999877 458999999987643 22347899999999999999999
Q ss_pred HHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHH
Q 045902 982 ESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1057 (1472)
Q Consensus 982 e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~ 1057 (1472)
||+.|....+. +.. ..++++++.+++.++.++.. ..|||||||||+|||||+.+|++|+||||||+||+.+
T Consensus 95 eNi~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~QRvalARAL~~~P~llLLDEP~s~LD~~~ 169 (356)
T PRK11650 95 ENMAYGLKIRGMPKAEIEERVAEAARILELEPLLDRKP-----RELSGGQRQRVAMGRAIVREPAVFLFDEPLSNLDAKL 169 (356)
T ss_pred HHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHH
Confidence 99999865432 222 45678888888888777654 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1058 AAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1058 ~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+..+.+.|+++.++ |.|+|++|||+. ++.+.+|++++|++ |+++..|+..
T Consensus 170 r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~l~D~i~vl~~-G~i~~~g~~~ 220 (356)
T PRK11650 170 RVQMRLEIQRLHRRLKTTSLYVTHDQV-EAMTLADRVVVMNG-GVAEQIGTPV 220 (356)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEECCHH
Confidence 99999999999765 999999999976 68889999999985 7999999864
No 96
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-36 Score=337.20 Aligned_cols=195 Identities=31% Similarity=0.468 Sum_probs=164.8
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|++
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 90 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLER--PDSGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTVA 90 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcCcCchhhccEEEEcCchhhccCCcHH
Confidence 569999999999999999999999999999999999876 458999999987643 22345789999999888999999
Q ss_pred HHHHHHHHcC-CCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHH
Q 045902 982 ESLLYSAWLR-LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1057 (1472)
Q Consensus 982 e~l~~~~~l~-~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~ 1057 (1472)
|++.+..... ... ...++++++.+++.+..++.. ..||||||||++||++|+.+|++|+|||||+|||+.+
T Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~ 165 (213)
T cd03259 91 ENIAFGLKLRGVPKAEIRARVRELLELVGLEGLLNRYP-----HELSGGQQQRVALARALAREPSLLLLDEPLSALDAKL 165 (213)
T ss_pred HHHHhHHHHcCCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHH
Confidence 9998765432 111 134567788888876666543 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1058 AAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1058 ~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
+..+++.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|
T Consensus 166 ~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~g 213 (213)
T cd03259 166 REELREELKELQRELGITTIYVTHDQE-EALALADRIAVMNE-GRIVQVG 213 (213)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999764 899999999976 46788999999986 6777654
No 97
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=2.4e-36 Score=359.09 Aligned_cols=210 Identities=26% Similarity=0.371 Sum_probs=180.1
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeE--EEEEEcCcc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIE--GSISISGYP 955 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~--G~i~i~G~~ 955 (1472)
+.++|+++.+ +++.+|+|+|++|++||+++|+|||||||||||++|+|..++ .+ |+|.++|.+
T Consensus 6 l~~~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p--~~~~G~i~~~g~~ 70 (362)
T TIGR03258 6 IRIDHLRVAY-------------GANTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKA--AGLTGRIAIADRD 70 (362)
T ss_pred EEEEEEEEEE-------------CCeEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCCCEEEEECCEE
Confidence 5667776554 234699999999999999999999999999999999998774 47 999999987
Q ss_pred CCh-hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHH
Q 045902 956 KKQ-ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKR 1030 (1472)
Q Consensus 956 ~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqR 1030 (1472)
... ...+|.+|||+|+..++|.+||+||+.|....+. +.. ..++++++.++|.++.++.. ..||||||||
T Consensus 71 ~~~~~~~~r~ig~vfQ~~~l~p~~tv~enl~~~l~~~~~~~~~~~~~v~~~l~~~gL~~~~~~~~-----~~LSgGq~QR 145 (362)
T TIGR03258 71 LTHAPPHKRGLALLFQNYALFPHLKVEDNVAFGLRAQKMPKADIAERVADALKLVGLGDAAAHLP-----AQLSGGMQQR 145 (362)
T ss_pred CCCCCHHHCCEEEEECCcccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCCchhhCCh-----hhCCHHHHHH
Confidence 643 2235679999999999999999999999865432 222 45778889999988877654 4799999999
Q ss_pred HHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC--CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1031 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT--GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1031 l~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~--g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||+++ ++...+|++++|++ |+++..|+.
T Consensus 146 vaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~~-ea~~l~dri~vl~~-G~i~~~g~~ 223 (362)
T TIGR03258 146 IAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQD-DALTLADKAGIMKD-GRLAAHGEP 223 (362)
T ss_pred HHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 99999999999999999999999999999999999999876 799999999976 57889999999985 799999986
Q ss_pred C
Q 045902 1109 G 1109 (1472)
Q Consensus 1109 ~ 1109 (1472)
.
T Consensus 224 ~ 224 (362)
T TIGR03258 224 Q 224 (362)
T ss_pred H
Confidence 3
No 98
>PRK13537 nodulation ABC transporter NodI; Provisional
Probab=100.00 E-value=4.3e-36 Score=351.34 Aligned_cols=206 Identities=27% Similarity=0.413 Sum_probs=177.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 263 (1472)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.+||++|++.+++.+|
T Consensus 20 ~~~l~~vsl~i~~Gei~gllGpNGaGKSTLl~~l~Gl~~p~---~G~v~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 96 (306)
T PRK13537 20 KLVVDGLSFHVQRGECFGLLGPNGAGKTTTLRMLLGLTHPD---AGSISLCGEPVPSRARHARQRVGVVPQFDNLDPDFT 96 (306)
T ss_pred eEEEecceEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEecccchHHHHhcEEEEeccCcCCCCCc
Confidence 46999999999999999999999999999999999999998 899999999886532 2467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.|.++..+... .+ . ...++.+++.+||.+.+++.+++
T Consensus 97 v~e~l~~~~~~~~~~~----------~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~---- 138 (306)
T PRK13537 97 VRENLLVFGRYFGLSA----------AA----------A--------------RALVPPLLEFAKLENKADAKVGE---- 138 (306)
T ss_pred HHHHHHHHHHHcCCCH----------HH----------H--------------HHHHHHHHHHcCCchHhcCchhh----
Confidence 9999998655432110 00 0 00135678899999888888765
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|++++.|+. .++.++||+|++|++|+
T Consensus 139 -LS~G~~qrl~la~aL~~~P~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~till~sH~l-~e~~~~~d~i~il~~G~ 215 (306)
T PRK13537 139 -LSGGMKRRLTLARALVNDPDVLVLDEPTTGLDPQARHLMWERLRSLLA-RGKTILLTTHFM-EEAERLCDRLCVIEEGR 215 (306)
T ss_pred -CCHHHHHHHHHHHHHhCCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEECCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999965 588999887765 47889999999999999
Q ss_pred EEEecChhHHHH
Q 045902 424 IVYQGPREYVLD 435 (1472)
Q Consensus 424 iv~~G~~~~~~~ 435 (1472)
+++.|+++++..
T Consensus 216 i~~~g~~~~l~~ 227 (306)
T PRK13537 216 KIAEGAPHALIE 227 (306)
T ss_pred EEEECCHHHHHh
Confidence 999999988754
No 99
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=1.8e-37 Score=320.32 Aligned_cols=203 Identities=25% Similarity=0.354 Sum_probs=178.3
Q ss_pred cccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeEEeccCCC
Q 045902 898 IEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE----TFARISGYCEQNDI 973 (1472)
Q Consensus 898 ~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~----~~~~~~gyv~Q~~~ 973 (1472)
.++++++++++||+.|++||++||+|||||||||.+.++.|...+ .+|.|.+||.++... ..+.-+||+||++.
T Consensus 12 K~y~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~--d~G~i~ld~~diT~lPm~~RArlGigYLpQE~S 89 (243)
T COG1137 12 KSYKKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRP--DSGKILLDDEDITKLPMHKRARLGIGYLPQEAS 89 (243)
T ss_pred HhhCCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEec--CCceEEECCcccccCChHHHhhcCcccccccch
Confidence 345678999999999999999999999999999999999998874 589999999987542 22335899999999
Q ss_pred CCCCCCHHHHHHHHHHcCCCc-h-----HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 045902 974 HSPNVTIYESLLYSAWLRLPK-D-----MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMD 1047 (1472)
Q Consensus 974 ~~~~lTv~e~l~~~~~l~~~~-~-----~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LD 1047 (1472)
.|..+||+||+......+... + ...+++++.+.+.++++... ..||||||+|+.|||||+.+|+.++||
T Consensus 90 IFr~LtV~dNi~~vlE~~~~d~~~~~~~~~l~~LL~ef~i~hlr~~~a-----~sLSGGERRR~EIARaLa~~P~fiLLD 164 (243)
T COG1137 90 IFRKLTVEDNIMAVLEIREKDLKKAERKEELDALLEEFHITHLRDSKA-----YSLSGGERRRVEIARALAANPKFILLD 164 (243)
T ss_pred HhhcCcHHHHHHHHHhhhhcchhHHHHHHHHHHHHHHhchHHHhcCcc-----cccccchHHHHHHHHHHhcCCCEEEec
Confidence 999999999998765554311 1 23568899999999998764 369999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1048 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1048 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
||++|+||-+...|.++++.|.+.|..|++|-|... +....|||..++.+ |++...|.++
T Consensus 165 EPFAGVDPiaV~dIq~iI~~L~~rgiGvLITDHNVR-EtL~i~dRaYIi~~-G~vla~G~p~ 224 (243)
T COG1137 165 EPFAGVDPIAVIDIQRIIKHLKDRGIGVLITDHNVR-ETLDICDRAYIISD-GKVLAEGSPE 224 (243)
T ss_pred CCccCCCchhHHHHHHHHHHHHhCCceEEEccccHH-HHHhhhheEEEEec-CeEEecCCHH
Confidence 999999999999999999999999999999999976 78999999999986 7999999864
No 100
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=3.2e-36 Score=359.16 Aligned_cols=218 Identities=25% Similarity=0.359 Sum_probs=184.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+++|+|+|+.+++||+++|+|||||||||||++|+|..+++ +|+|.++|+++....+ ++.++||+|++.++|.+||
T Consensus 27 ~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~p~---~G~I~~~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 103 (375)
T PRK09452 27 KEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFETPD---SGRIMLDGQDITHVPAENRHVNTVFQSYALFPHMTV 103 (375)
T ss_pred eEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEecCcccCCCCCH
Confidence 35899999999999999999999999999999999999987 8999999999876544 4679999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.|+.+..+.. +.+ . ...++.+++.+||++..|..+. .
T Consensus 104 ~eNi~~~l~~~~~~----------~~~----------~--------------~~~~~~~l~~~~l~~~~~~~p~-----~ 144 (375)
T PRK09452 104 FENVAFGLRMQKTP----------AAE----------I--------------TPRVMEALRMVQLEEFAQRKPH-----Q 144 (375)
T ss_pred HHHHHHHHhhcCCC----------HHH----------H--------------HHHHHHHHHHcCCchhhhCChh-----h
Confidence 99999975432211 000 0 0124567899999988887665 5
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+|||||+.+|++|+||||++|||..++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 145 LSgGq~QRVaLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~-~ea~~laDri~vl~~G~i 223 (375)
T PRK09452 145 LSGGQQQRVAIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQ-EEALTMSDRIVVMRDGRI 223 (375)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999887788888877654 588899999999999999
Q ss_pred EEecChhHHHHHHHhcCCCCCCCCChHHHH
Q 045902 425 VYQGPREYVLDFFESVGFRCPERKGAADFL 454 (1472)
Q Consensus 425 v~~G~~~~~~~~F~~~G~~cp~~~~~adfl 454 (1472)
+..|+++++. ..|...-.|+|+
T Consensus 224 ~~~g~~~~i~--------~~p~~~~~a~~~ 245 (375)
T PRK09452 224 EQDGTPREIY--------EEPKNLFVARFI 245 (375)
T ss_pred EEEcCHHHHH--------hCcccHHHHHhc
Confidence 9999998873 245544455554
No 101
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4e-36 Score=336.64 Aligned_cols=196 Identities=28% Similarity=0.427 Sum_probs=167.6
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYE 982 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 982 (1472)
+.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... .++.++|++|++.+++.+|++|
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~e 92 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLER--PTSGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVLD 92 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECcc--ccCcEEEEecccccccCCCHHH
Confidence 469999999999999999999999999999999999876 358999999987642 3567899999998888899999
Q ss_pred HHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHH
Q 045902 983 SLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1058 (1472)
Q Consensus 983 ~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~ 1058 (1472)
++.+....+. +. ...++++++.+++.+..++.. ..||||||||++||+||+.+|++|+|||||+|||+.++
T Consensus 93 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~ 167 (220)
T cd03293 93 NVALGLELQGVPKAEARERAEELLELVGLSGFENAYP-----HQLSGGMRQRVALARALAVDPDVLLLDEPFSALDALTR 167 (220)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHH
Confidence 9987654332 11 234667888888876655543 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEec-CcEEEEEcCC
Q 045902 1059 AIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGHVIYAGPL 1108 (1472)
Q Consensus 1059 ~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~-gg~v~~~g~~ 1108 (1472)
..+++.|+++.+ .|+|||+++|+++ ++.+.+|++++|++ +|+++..+++
T Consensus 168 ~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 218 (220)
T cd03293 168 EQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGRIVAEVEV 218 (220)
T ss_pred HHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCEEEEEEEe
Confidence 999999999865 4899999999976 46788999999985 4889888765
No 102
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=3.8e-36 Score=352.27 Aligned_cols=210 Identities=25% Similarity=0.375 Sum_probs=176.7
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+||||+|++||++||+||||||||||+++|+|..++ .+|+|.++|.+.
T Consensus 4 ~i~~~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p--~~G~i~~~g~~~ 68 (303)
T TIGR01288 4 AIDLVGVSKSY-------------GDKVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISP--DRGKITVLGEPV 68 (303)
T ss_pred EEEEEeEEEEe-------------CCeEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCC--CceEEEECCEEC
Confidence 46677776554 235699999999999999999999999999999999998763 589999999875
Q ss_pred Ch--hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHH
Q 045902 957 KQ--ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKR 1030 (1472)
Q Consensus 957 ~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqR 1030 (1472)
.. ...++.+||++|++.+++.+||.|++.+.+... .+.. ..++++++.+++.+..++.+ ..||||||||
T Consensus 69 ~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~-----~~LSgG~~qr 143 (303)
T TIGR01288 69 PSRARLARVAIGVVPQFDNLDPEFTVRENLLVFGRYFGMSTREIEAVIPSLLEFARLESKADVRV-----ALLSGGMKRR 143 (303)
T ss_pred cccHHHHhhcEEEEeccccCCcCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCch-----hhCCHHHHHH
Confidence 32 234567999999999999999999998655432 2222 34567788888877666654 4799999999
Q ss_pred HHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1031 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1031 l~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 144 v~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~g~til~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 219 (303)
T TIGR01288 144 LTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLARGKTILLTTHFME-EAERLCDRLCVLES-GRKIAEGRP 219 (303)
T ss_pred HHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEECCCHH-HHHHhCCEEEEEEC-CEEEEEcCH
Confidence 99999999999999999999999999999999999999878999999999986 57788999999985 789998875
No 103
>TIGR03258 PhnT 2-aminoethylphosphonate ABC transport system, ATP-binding component PhnT. This ATP-binding component of an ABC transport system is found in Salmonella and Burkholderia lineages in the vicinity of enzymes for the breakdown of 2-aminoethylphosphonate.
Probab=100.00 E-value=3.7e-36 Score=357.50 Aligned_cols=206 Identities=22% Similarity=0.355 Sum_probs=178.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCce--eEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVS--GRVTYCGHELTEFVP-QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~--G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~l 262 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|+.+++ + |+|.++|+++....+ ++.++||+|+..++|.+
T Consensus 18 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~iaGl~~p~---~~~G~i~~~g~~~~~~~~~~r~ig~vfQ~~~l~p~~ 94 (362)
T TIGR03258 18 NTVLDDLSLEIEAGELLALIGKSGCGKTTLLRAIAGFVKAA---GLTGRIAIADRDLTHAPPHKRGLALLFQNYALFPHL 94 (362)
T ss_pred eEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCCEEEEECCEECCCCCHHHCCEEEEECCcccCCCC
Confidence 35899999999999999999999999999999999999987 7 999999999876544 36799999999999999
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||+||+.|+.+..+.. +.+ . ...++.+++.+||++..|+.+.
T Consensus 95 tv~enl~~~l~~~~~~----------~~~----------~--------------~~~v~~~l~~~gL~~~~~~~~~---- 136 (362)
T TIGR03258 95 KVEDNVAFGLRAQKMP----------KAD----------I--------------AERVADALKLVGLGDAAAHLPA---- 136 (362)
T ss_pred cHHHHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHhcCCCchhhCChh----
Confidence 9999999976533211 000 0 0124668899999988887765
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhC-CcEEEEEEecCcchHHhccCeEEEecC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHIT-DVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~-~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
.|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+.. +.|+|++.|++ .++..++|+|++|++
T Consensus 137 -~LSgGq~QRvaLARAL~~~P~llLLDEP~s~LD~~~r~~l~~~l~~l~~~~~g~til~vTHd~-~ea~~l~dri~vl~~ 214 (362)
T TIGR03258 137 -QLSGGMQQRIAIARAIAIEPDVLLLDEPLSALDANIRANMREEIAALHEELPELTILCVTHDQ-DDALTLADKAGIMKD 214 (362)
T ss_pred -hCCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhCCCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 499999999999999999999999999999999999999999999998765 78888877664 578899999999999
Q ss_pred CeEEEecChhHHH
Q 045902 422 GEIVYQGPREYVL 434 (1472)
Q Consensus 422 G~iv~~G~~~~~~ 434 (1472)
|+++..|+++++.
T Consensus 215 G~i~~~g~~~~~~ 227 (362)
T TIGR03258 215 GRLAAHGEPQALY 227 (362)
T ss_pred CEEEEEcCHHHHH
Confidence 9999999998874
No 104
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.9e-36 Score=320.90 Aligned_cols=206 Identities=26% Similarity=0.387 Sum_probs=173.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCC----ceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQ----RTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~~~ 261 (1472)
.++|+|||+.+++||+++|+||||+|||||||+|+|..++. +|+|.++|++++...+. +.++||||....||+
T Consensus 16 ~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~~---~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF~~ 92 (237)
T COG0410 16 IQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRPR---SGRIIFDGEDITGLPPHERARLGIAYVPEGRRIFPR 92 (237)
T ss_pred eeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeeEEECCeecCCCCHHHHHhCCeEeCcccccchhh
Confidence 57999999999999999999999999999999999999887 89999999999988764 569999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHh-CCcccccccccCc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKIL-GLDICADIMVGNE 340 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~vg~~ 340 (1472)
|||+|||..++...... +.. .. ..|.+.+.| .|....++.-|+
T Consensus 93 LTVeENL~~g~~~~~~~------------~~~-----~~------------------~~e~v~~lFP~Lker~~~~aG~- 136 (237)
T COG0410 93 LTVEENLLLGAYARRDK------------EAQ-----ER------------------DLEEVYELFPRLKERRNQRAGT- 136 (237)
T ss_pred CcHHHHHhhhhhccccc------------ccc-----cc------------------cHHHHHHHChhHHHHhcCcccC-
Confidence 99999998875432110 000 00 022233333 244445666665
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
|||||||.++|||||+++|++|+|||||.||-|.-..+|.+.++++.+..+.||++ ..|......+++||.++|.
T Consensus 137 ----LSGGEQQMLAiaRALm~~PklLLLDEPs~GLaP~iv~~I~~~i~~l~~~~g~tIlL-VEQn~~~Al~iaDr~yvle 211 (237)
T COG0410 137 ----LSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIKELRKEGGMTILL-VEQNARFALEIADRGYVLE 211 (237)
T ss_pred ----CChHHHHHHHHHHHHhcCCCEEEecCCccCcCHHHHHHHHHHHHHHHHcCCcEEEE-EeccHHHHHHhhCEEEEEe
Confidence 99999999999999999999999999999999999999999999998766766665 5799999999999999999
Q ss_pred CCeEEEecChhHHHH
Q 045902 421 EGEIVYQGPREYVLD 435 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~~ 435 (1472)
+|+|++.|+.+++..
T Consensus 212 ~Griv~~G~~~eL~~ 226 (237)
T COG0410 212 NGRIVLSGTAAELLA 226 (237)
T ss_pred CCEEEEecCHHHHhc
Confidence 999999999988753
No 105
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=7.3e-36 Score=337.98 Aligned_cols=206 Identities=28% Similarity=0.352 Sum_probs=172.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++|++|++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (235)
T cd03261 13 RTVLKGVDLDVRRGEILAIIGPSGSGKSTLLRLIVGLLRPD---SGEVLIDGEDISGLSEAELYRLRRRMGMLFQSGALF 89 (235)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccChhhHHHHhcceEEEccCcccC
Confidence 36999999999999999999999999999999999999887 8999999998765432 35699999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||+||+.+..+..... ...+ . ...++.+++.+||++..++.+++
T Consensus 90 ~~~tv~~~l~~~~~~~~~~---------~~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~ 136 (235)
T cd03261 90 DSLTVFENVAFPLREHTRL---------SEEE----------I--------------REIVLEKLEAVGLRGAEDLYPAE 136 (235)
T ss_pred CCCcHHHHHHHHHhhccCC---------CHHH----------H--------------HHHHHHHHHHcCCchhhcCChhh
Confidence 9999999998864321000 0000 0 00134578889998777776654
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..++|+|++.|++. ++.+++|+|++|
T Consensus 137 -----LSgG~~qrv~ia~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~vsH~~~-~~~~~~d~v~~l 210 (235)
T cd03261 137 -----LSGGMKKRVALARALALDPELLLYDEPTAGLDPIASGVIDDLIRSLKKELGLTSIMVTHDLD-TAFAIADRIAVL 210 (235)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhcCEEEEE
Confidence 99999999999999999999999999999999999999999999987655788888877654 677899999999
Q ss_pred cCCeEEEecChhHH
Q 045902 420 SEGEIVYQGPREYV 433 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~ 433 (1472)
++|++++.|+.+++
T Consensus 211 ~~G~i~~~g~~~~~ 224 (235)
T cd03261 211 YDGKIVAEGTPEEL 224 (235)
T ss_pred ECCeEEEecCHHHH
Confidence 99999999998765
No 106
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=3.8e-36 Score=335.93 Aligned_cols=190 Identities=24% Similarity=0.355 Sum_probs=162.1
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQNDIHSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~~~~~ 976 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 93 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEK--PTRGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLLS 93 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEehhhcChhHHHHHHHhceEEecCccccc
Confidence 369999999999999999999999999999999999876 358999999987532 124567999999999999
Q ss_pred CCCHHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 977 NVTIYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
.+||.||+.+....+. .. ...++++++.+++.+..++.. ..||||||||++||+||+.+|++|+|||||+|
T Consensus 94 ~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~~ 168 (216)
T TIGR00960 94 DRTVYDNVAFPLRIIGVPPRDANERVSAALEKVGLEGKAHALP-----MQLSGGEQQRVAIARAIVHKPPLLLADEPTGN 168 (216)
T ss_pred cccHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCc
Confidence 9999999988654332 11 235677888888877666543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGH 1101 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~ 1101 (1472)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|.+ |+
T Consensus 169 LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~ 215 (216)
T TIGR00960 169 LDPELSRDIMRLFEEFNRRGTTVLVATHDIN-LVETYRHRTLTLSR-GR 215 (216)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999877999999999976 46678999999986 44
No 107
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.8e-36 Score=333.60 Aligned_cols=194 Identities=26% Similarity=0.436 Sum_probs=165.4
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYE 982 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 982 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..++.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~e 89 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIIL--PDSGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVID 89 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHHH
Confidence 469999999999999999999999999999999999876 458999999987643 34567899999999999999999
Q ss_pred HHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHH
Q 045902 983 SLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1058 (1472)
Q Consensus 983 ~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~ 1058 (1472)
|+.+....+. +. ...++++++.+++.+..++.. ..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 90 ~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~ 164 (210)
T cd03269 90 QLVYLAQLKGLKKEEARRRIDEWLERLELSEYANKRV-----EELSKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNV 164 (210)
T ss_pred HHHHHHHHcCCChHHHHHHHHHHHHHcCChHHHhCcH-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHH
Confidence 9987654432 11 134567788888876655543 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1059 AIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1059 ~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 165 ~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~ 210 (210)
T cd03269 165 ELLKDVIRELARAGKTVILSTHQME-LVEELCDRVLLLNK-GRAVLYG 210 (210)
T ss_pred HHHHHHHHHHHHCCCEEEEECCCHH-HHHHhhhEEEEEeC-CEEEecC
Confidence 9999999999877899999999976 46678999999985 6777653
No 108
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-36 Score=335.60 Aligned_cols=198 Identities=28% Similarity=0.391 Sum_probs=168.4
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
++.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 12 ~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 12 DFEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLK--PTSGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred CEEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 3569999999999999999999999999999999999876 358999999987532 234567899999999999999
Q ss_pred HHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 045902 980 IYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1055 (1472)
Q Consensus 980 v~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~ 1055 (1472)
|+|++.+....+. +. ...++++++.+++.+..++.. ..||||||||++||+||+.+|++|+|||||+|||+
T Consensus 90 v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~la~al~~~p~llllDEPt~~LD~ 164 (220)
T cd03265 90 GWENLYIHARLYGVPGAERRERIDELLDFVGLLEAADRLV-----KTYSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDP 164 (220)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCH
Confidence 9999988654432 21 234677888888876666543 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1056 RAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1056 ~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 165 ~~~~~l~~~l~~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (220)
T cd03265 165 QTRAHVWEYIEKLKEEFGMTILLTTHYME-EAEQLCDRVAIIDH-GRIIAEGTP 216 (220)
T ss_pred HHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEeCCh
Confidence 9999999999999876 899999999976 47778999999985 788887764
No 109
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=6.2e-36 Score=338.88 Aligned_cols=197 Identities=29% Similarity=0.401 Sum_probs=167.1
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh---c-ccceeEEeccCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE---T-FARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~---~-~~~~~gyv~Q~~~~~~~l 978 (1472)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~~ 90 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLR--PTSGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPEL 90 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEECCCCCHHHHHhcCEEEEecccccccCC
Confidence 469999999999999999999999999999999999876 3589999999876431 1 234689999999999999
Q ss_pred CHHHHHHHHHHcCCC-----------c---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 045902 979 TIYESLLYSAWLRLP-----------K---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSII 1044 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~~-----------~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il 1044 (1472)
||+|++.+....... . ...++++++.+++.+..++. +..||||||||++||++|+.+|++|
T Consensus 91 tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 165 (236)
T cd03219 91 TVLENVMVAAQARTGSGLLLARARREEREARERAEELLERVGLADLADRP-----AGELSYGQQRRLEIARALATDPKLL 165 (236)
T ss_pred CHHHHHHHHHhhccccccccccccccHHHHHHHHHHHHHHcCccchhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999876543211 1 13456778888887665554 3479999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1045 FMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1045 ~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+|||||+|||+.++..+++.|++++++|+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 166 llDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (236)
T cd03219 166 LLDEPAAGLNPEETEELAELIRELRERGITVLLVEHDMD-VVMSLADRVTVLDQ-GRVIAEGTP 227 (236)
T ss_pred EEcCCcccCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEeecCH
Confidence 999999999999999999999999877999999999986 46778999999985 788888864
No 110
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=352.67 Aligned_cols=206 Identities=26% Similarity=0.372 Sum_probs=176.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++..... ++.++|++|++.++
T Consensus 18 ~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~ig~v~q~~~l~ 94 (343)
T PRK11153 18 IHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLERPT---SGRVLVDGQDLTALSEKELRKARRQIGMIFQHFNLL 94 (343)
T ss_pred eEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCcCCHHHHHHHhcCEEEEeCCCccC
Confidence 56999999999999999999999999999999999999987 8999999999875432 35799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||+||+.+.....+.. ..+ . ...++.+++.+||++..++.+.
T Consensus 95 ~~~tv~eni~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~gL~~~~~~~~~- 139 (343)
T PRK11153 95 SSRTVFDNVALPLELAGTP----------KAE----------I--------------KARVTELLELVGLSDKADRYPA- 139 (343)
T ss_pred CCCcHHHHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHHcCCchhhhCChh-
Confidence 9999999998865432210 000 0 0013567889999887777665
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..++|+|++.|++ .++.+++|++++|
T Consensus 140 ----~LSgGq~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~-~~i~~~~d~v~~l 214 (343)
T PRK11153 140 ----QLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEM-DVVKRICDRVAVI 214 (343)
T ss_pred ----hCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 49999999999999999999999999999999999999999999999876688998888765 4777899999999
Q ss_pred cCCeEEEecChhHHH
Q 045902 420 SEGEIVYQGPREYVL 434 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~ 434 (1472)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~g~~~~~~ 229 (343)
T PRK11153 215 DAGRLVEQGTVSEVF 229 (343)
T ss_pred ECCEEEEEcCHHHHH
Confidence 999999999988774
No 111
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=7e-36 Score=349.54 Aligned_cols=197 Identities=24% Similarity=0.401 Sum_probs=172.3
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
++.+|+|+||++++||++||+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+||++|++.+++.+|
T Consensus 14 ~~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~--~~~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 14 TQNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLP--PDSGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred CEEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 3569999999999999999999999999999999999876 458999999987643 234567999999999999999
Q ss_pred HHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 045902 980 IYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1055 (1472)
Q Consensus 980 v~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~ 1055 (1472)
+.|++.+.+.++. +. ...++++++.+++.+..++.+ +.||||||||++||+||+++|++|+|||||+|||+
T Consensus 92 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~ 166 (301)
T TIGR03522 92 VREYLQFIAGIYGMKGQLLKQRVEEMIELVGLRPEQHKKI-----GQLSKGYRQRVGLAQALIHDPKVLILDEPTTGLDP 166 (301)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchHhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCH
Confidence 9999998776543 22 245678888999888777664 47999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1056 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1056 ~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
.++..+++.|+++++ ++|||++||+++ ++.+.||++++|++ |++++.|+.
T Consensus 167 ~~~~~l~~~l~~~~~-~~tiii~sH~l~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (301)
T TIGR03522 167 NQLVEIRNVIKNIGK-DKTIILSTHIMQ-EVEAICDRVIIINK-GKIVADKKL 216 (301)
T ss_pred HHHHHHHHHHHHhcC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999999999965 799999999986 57888999999985 799999986
No 112
>PRK09452 potA putrescine/spermidine ABC transporter ATPase protein; Reviewed
Probab=100.00 E-value=7e-36 Score=356.31 Aligned_cols=211 Identities=21% Similarity=0.342 Sum_probs=180.7
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 14 ~L~l~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~LlGpsGsGKSTLLr~IaGl~~--p~~G~I~~~g~~i 78 (375)
T PRK09452 14 LVELRGISKSF-------------DGKEVISNLDLTINNGEFLTLLGPSGCGKTTVLRLIAGFET--PDSGRIMLDGQDI 78 (375)
T ss_pred eEEEEEEEEEE-------------CCeEEEeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 46778877654 23469999999999999999999999999999999999887 4589999999876
Q ss_pred Ch-hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHH
Q 045902 957 KQ-ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRL 1031 (1472)
Q Consensus 957 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl 1031 (1472)
.. ...+|.+||++|+..++|++||.||+.|....+. +.. ..++++++.+++.++.++.. ..|||||||||
T Consensus 79 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~p-----~~LSgGq~QRV 153 (375)
T PRK09452 79 THVPAENRHVNTVFQSYALFPHMTVFENVAFGLRMQKTPAAEITPRVMEALRMVQLEEFAQRKP-----HQLSGGQQQRV 153 (375)
T ss_pred CCCCHHHCCEEEEecCcccCCCCCHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHH
Confidence 43 2235779999999999999999999999765432 222 35677888888887777653 47999999999
Q ss_pred HHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1032 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1032 ~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++||++. ++...+|++++|++ |+++..|+..
T Consensus 154 aLARaL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tiI~vTHd~~-ea~~laDri~vl~~-G~i~~~g~~~ 230 (375)
T PRK09452 154 AIARAVVNKPKVLLLDESLSALDYKLRKQMQNELKALQRKLGITFVFVTHDQE-EALTMSDRIVVMRD-GRIEQDGTPR 230 (375)
T ss_pred HHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 9999999999999999999999999999999999999865 999999999986 67889999999985 7999998753
No 113
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-36 Score=313.51 Aligned_cols=210 Identities=26% Similarity=0.411 Sum_probs=180.1
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
++.+|++|.+ .++++|++||++++|||++||+||||||||||||+|+|...+ .+|++.++|.+.+
T Consensus 2 i~a~nls~~~-------------~Gr~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p--~~G~v~~~g~~l~ 66 (259)
T COG4559 2 IRAENLSYSL-------------AGRRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSP--DSGEVTLNGVPLN 66 (259)
T ss_pred eeeeeeEEEe-------------ecceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCC--CCCeEeeCCcChh
Confidence 4567888776 357899999999999999999999999999999999998774 4899999999875
Q ss_pred h---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC----CCch--HHHHHHHHHcccccccccccCCCCCCCCCHHHH
Q 045902 958 Q---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR----LPKD--MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQR 1028 (1472)
Q Consensus 958 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~----~~~~--~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqr 1028 (1472)
. ....+..+.+||+..+....||+|-+.++..-. .+.+ ...+++++..++.+++.+.. ..||||||
T Consensus 67 ~~~~~~lA~~raVlpQ~s~laFpFtv~eVV~mGr~p~~~g~~~~e~~~i~~~ala~~d~~~la~R~y-----~~LSGGEq 141 (259)
T COG4559 67 SWPPEELARHRAVLPQNSSLAFPFTVQEVVQMGRIPHRSGREPEEDERIAAQALAATDLSGLAGRDY-----RTLSGGEQ 141 (259)
T ss_pred hCCHHHHHHHhhhcccCcccccceEHHHHHHhcccccccCCCchhhHHHHHHHHHHcChhhhhccch-----hhcCchHH
Confidence 4 345667799999999888899999999875432 1112 33678899999999887654 47999999
Q ss_pred HHHHHHHHHhh------CCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1029 KRLTIAVELVA------NPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1029 qRl~iA~aL~~------~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
|||.+||.|+. ++++||||||||.||...+..++++.|+++++|..|+++.||.+. ...++|++++|++ |++
T Consensus 142 QRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~g~~V~~VLHDLNL-AA~YaDrivll~~-Grv 219 (259)
T COG4559 142 QRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLAREGGAVLAVLHDLNL-AAQYADRIVLLHQ-GRV 219 (259)
T ss_pred HHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhcCCcEEEEEccchH-HHHhhheeeeeeC-CeE
Confidence 99999999975 346899999999999999999999999999999999999999986 6778999999985 799
Q ss_pred EEEcCCC
Q 045902 1103 IYAGPLG 1109 (1472)
Q Consensus 1103 ~~~g~~~ 1109 (1472)
+..|++.
T Consensus 220 ~a~g~p~ 226 (259)
T COG4559 220 IASGSPQ 226 (259)
T ss_pred eecCCHH
Confidence 9999874
No 114
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=6.4e-36 Score=355.10 Aligned_cols=198 Identities=27% Similarity=0.416 Sum_probs=171.7
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
+.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ...++.+||++|++.++|.+||.
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv~ 92 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEH--QTSGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTVF 92 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcHH
Confidence 569999999999999999999999999999999999877 458999999988643 22346799999999999999999
Q ss_pred HHHHHHHHcC-----CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 982 ESLLYSAWLR-----LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 982 e~l~~~~~l~-----~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
||+.|....+ .+.. ..++++++.+++.++.++.. ..|||||||||+|||||+.+|++|+|||||+||
T Consensus 93 eni~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgGq~QRvalArAL~~~P~llLLDEP~s~L 167 (353)
T PRK10851 93 DNIAFGLTVLPRRERPNAAAIKAKVTQLLEMVQLAHLADRYP-----AQLSGGQKQRVALARALAVEPQILLLDEPFGAL 167 (353)
T ss_pred HHHHhhhhhcccccCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccC
Confidence 9999876531 1211 35677888888877766653 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1054 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
|+.++..+.+.|+++.++ |.|+|++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 168 D~~~r~~l~~~L~~l~~~~g~tii~vTHd~~-ea~~~~Dri~vl~~-G~i~~~g~~~ 222 (353)
T PRK10851 168 DAQVRKELRRWLRQLHEELKFTSVFVTHDQE-EAMEVADRVVVMSQ-GNIEQAGTPD 222 (353)
T ss_pred CHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 999999999999999866 899999999986 57889999999985 7999998753
No 115
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.3e-36 Score=338.31 Aligned_cols=209 Identities=27% Similarity=0.414 Sum_probs=173.7
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+ +++.+|+|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~ 67 (239)
T cd03296 3 IEVRNVSKRF-------------GDFVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLER--PDSGTILFGGEDAT 67 (239)
T ss_pred EEEEeEEEEE-------------CCEEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5567766554 23569999999999999999999999999999999999876 35899999998754
Q ss_pred hh-cccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-----Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHH
Q 045902 958 QE-TFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-----PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQR 1028 (1472)
Q Consensus 958 ~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-----~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqr 1028 (1472)
.. ..++.++|++|++.+++.+||.||+.+....+. ... +.++++++.+++.+..+... ..||||||
T Consensus 68 ~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 142 (239)
T cd03296 68 DVPVQERNVGFVFQHYALFRHMTVFDNVAFGLRVKPRSERPPEAEIRAKVHELLKLVQLDWLADRYP-----AQLSGGQR 142 (239)
T ss_pred cCCccccceEEEecCCcccCCCCHHHHHhhhhhhccccccCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHH
Confidence 31 224568999999998889999999987654321 111 34567788888876665543 47999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcC
Q 045902 1029 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGP 1107 (1472)
Q Consensus 1029 qRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~ 1107 (1472)
||++||+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |++++.|+
T Consensus 143 qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~ 220 (239)
T cd03296 143 QRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQE-EALEVADRVVVMNK-GRIEQVGT 220 (239)
T ss_pred HHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEecC
Confidence 9999999999999999999999999999999999999999875 899999999976 46788999999985 78888887
Q ss_pred C
Q 045902 1108 L 1108 (1472)
Q Consensus 1108 ~ 1108 (1472)
.
T Consensus 221 ~ 221 (239)
T cd03296 221 P 221 (239)
T ss_pred H
Confidence 5
No 116
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=7.4e-36 Score=332.85 Aligned_cols=195 Identities=29% Similarity=0.436 Sum_probs=164.7
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++..|++
T Consensus 13 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 13 VTALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEE--PTSGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 469999999999999999999999999999999999876 358999999987643 12245799999999888899999
Q ss_pred HHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHH
Q 045902 982 ESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1057 (1472)
Q Consensus 982 e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~ 1057 (1472)
||+.+....+. ..+ ..++++++.+++.+..+..+ ..||||||||++||++|+.+|++|+|||||+|||+.+
T Consensus 91 ~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qr~~laral~~~p~llllDEPt~~LD~~~ 165 (213)
T cd03301 91 DNIAFGLKLRKVPKDEIDERVREVAELLQIEHLLDRKP-----KQLSGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKL 165 (213)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHHHHhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHH
Confidence 99987644322 112 34567778888876666543 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1058 AAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1058 ~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
+..+++.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|
T Consensus 166 ~~~l~~~l~~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-g~~~~~g 213 (213)
T cd03301 166 RVQMRAELKRLQQRLGTTTIYVTHDQV-EAMTMADRIAVMND-GQIQQIG 213 (213)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecC
Confidence 99999999999864 899999999976 46778999999985 6887765
No 117
>COG2884 FtsE Predicted ATPase involved in cell division [Cell division and chromosome partitioning]
Probab=100.00 E-value=6.6e-36 Score=306.94 Aligned_cols=200 Identities=25% Similarity=0.411 Sum_probs=172.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
..+|+|||+.|++||++.|+||||||||||||+|.+...|+ +|+|.+||+++..... +|.+|+|+|+..++
T Consensus 15 ~~aL~~vs~~i~~Gef~fl~GpSGAGKSTllkLi~~~e~pt---~G~i~~~~~dl~~l~~~~iP~LRR~IGvVFQD~rLL 91 (223)
T COG2884 15 REALRDVSFHIPKGEFVFLTGPSGAGKSTLLKLIYGEERPT---RGKILVNGHDLSRLKGREIPFLRRQIGVVFQDFRLL 91 (223)
T ss_pred chhhhCceEeecCceEEEEECCCCCCHHHHHHHHHhhhcCC---CceEEECCeecccccccccchhhheeeeEeeecccc
Confidence 56999999999999999999999999999999999999998 9999999999976542 57899999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+..||.||+.|+.+..|...+ ++ +..+..+|+..||.+.++..
T Consensus 92 ~~~tvyeNVA~pL~v~G~~~~-----~i-----------------------------~~rV~~~L~~VgL~~k~~~l--- 134 (223)
T COG2884 92 PDRTVYENVALPLRVIGKPPR-----EI-----------------------------RRRVSEVLDLVGLKHKARAL--- 134 (223)
T ss_pred ccchHhhhhhhhhhccCCCHH-----HH-----------------------------HHHHHHHHHHhccchhhhcC---
Confidence 999999999999887664321 11 11245678999999888754
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
+..|||||||||+||||++.+|++|+.||||-.||+.++.+|++.+.++.+ .|+||+++.|. ..-+-.+-.+++.|
T Consensus 135 --P~~LSGGEQQRvaIARAiV~~P~vLlADEPTGNLDp~~s~~im~lfeeinr-~GtTVl~ATHd-~~lv~~~~~rvl~l 210 (223)
T COG2884 135 --PSQLSGGEQQRVAIARAIVNQPAVLLADEPTGNLDPDLSWEIMRLFEEINR-LGTTVLMATHD-LELVNRMRHRVLAL 210 (223)
T ss_pred --ccccCchHHHHHHHHHHHccCCCeEeecCCCCCCChHHHHHHHHHHHHHhh-cCcEEEEEecc-HHHHHhccCcEEEE
Confidence 456999999999999999999999999999999999999999999999865 78999998764 33445566789999
Q ss_pred cCCeEEEecC
Q 045902 420 SEGEIVYQGP 429 (1472)
Q Consensus 420 ~~G~iv~~G~ 429 (1472)
++|+++....
T Consensus 211 ~~Grl~~d~~ 220 (223)
T COG2884 211 EDGRLVRDES 220 (223)
T ss_pred eCCEEEeccc
Confidence 9999987643
No 118
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=6.9e-36 Score=320.97 Aligned_cols=205 Identities=26% Similarity=0.341 Sum_probs=174.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC----CCceEEEEcCCC--CCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV----PQRTCAYISQHD--LHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d--~~~ 259 (1472)
.++|+|||+++.+||.++|+|+||||||||.++|+|..+|+ +|+|+++|.+..... ..+.+-+|+||+ .+.
T Consensus 20 ~~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p~---~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLn 96 (252)
T COG1124 20 FHALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKPS---SGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLN 96 (252)
T ss_pred hhhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCCC---CceEEECCcccCccccchhhccceeEEecCCccccC
Confidence 37999999999999999999999999999999999999998 999999998776543 346799999997 678
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccc-cccccc
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDIC-ADIMVG 338 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~-~dt~vg 338 (1472)
|..||++.|.-+.+..+.. +.++ .+.++++.+||+.. ++
T Consensus 97 P~~tv~~~l~Epl~~~~~~----------~~~~--------------------------~i~~~L~~VgL~~~~l~---- 136 (252)
T COG1124 97 PRRTVGRILSEPLRPHGLS----------KSQQ--------------------------RIAELLDQVGLPPSFLD---- 136 (252)
T ss_pred cchhHHHHHhhhhccCCcc----------HHHH--------------------------HHHHHHHHcCCCHHHHh----
Confidence 9999999997655432211 1111 13457888999863 34
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
.++..|||||||||+|||||+.+|++|++|||||+||++...+|++.|.++.+..+.|.++..| ...-+..+||||++
T Consensus 137 -R~P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~siQa~IlnlL~~l~~~~~lt~l~IsH-dl~~v~~~cdRi~V 214 (252)
T COG1124 137 -RRPHELSGGQRQRIAIARALIPEPKLLILDEPTSALDVSVQAQILNLLLELKKERGLTYLFISH-DLALVEHMCDRIAV 214 (252)
T ss_pred -cCchhcChhHHHHHHHHHHhccCCCEEEecCchhhhcHHHHHHHHHHHHHHHHhcCceEEEEeC-cHHHHHHHhhheee
Confidence 3455699999999999999999999999999999999999999999999999988888888665 56688899999999
Q ss_pred ecCCeEEEecChhHHHH
Q 045902 419 LSEGEIVYQGPREYVLD 435 (1472)
Q Consensus 419 L~~G~iv~~G~~~~~~~ 435 (1472)
|++|++++.++.+++..
T Consensus 215 m~~G~ivE~~~~~~l~~ 231 (252)
T COG1124 215 MDNGQIVEIGPTEELLS 231 (252)
T ss_pred eeCCeEEEeechhhhhc
Confidence 99999999999998864
No 119
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.6e-36 Score=334.35 Aligned_cols=210 Identities=25% Similarity=0.392 Sum_probs=180.3
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.+++++|.++ ++..+|+|+|++|++||.++|+|+||||||||+++|+|...+ .+|.|.++|.+..
T Consensus 4 i~~~~l~~~y~------------~~~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p--~~G~v~~~g~~~~ 69 (235)
T COG1122 4 IEAENLSFRYP------------GRKAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKP--TSGEVLVDGLDTS 69 (235)
T ss_pred EEEEEEEEEcC------------CCceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcC--CCCEEEECCeecc
Confidence 45777777653 125799999999999999999999999999999999999874 5899999999854
Q ss_pred ----hhcccceeEEeccCCCC-CCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHH
Q 045902 958 ----QETFARISGYCEQNDIH-SPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQR 1028 (1472)
Q Consensus 958 ----~~~~~~~~gyv~Q~~~~-~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqr 1028 (1472)
....++.+|||+|++.. +..-||.|.+.|+.... .+.+ .+++++++.+++.+++++. +..||||||
T Consensus 70 ~~~~~~~~~~~vG~VfQnpd~q~~~~tV~~evafg~~n~g~~~~e~~~rv~~~l~~vgl~~~~~r~-----p~~LSGGqk 144 (235)
T COG1122 70 SEKSLLELRQKVGLVFQNPDDQLFGPTVEDEVAFGLENLGLPREEIEERVAEALELVGLEELLDRP-----PFNLSGGQK 144 (235)
T ss_pred chhhHHHhhcceEEEEECcccccccCcHHHHHhhchhhcCCCHHHHHHHHHHHHHHcCchhhccCC-----ccccCCcce
Confidence 35678889999999854 45779999999986543 3332 4678889999998887765 347999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcC
Q 045902 1029 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGP 1107 (1472)
Q Consensus 1029 qRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~ 1107 (1472)
|||+||.+|+.+|++|+|||||||||+.++..+++.++++..+ |.|||++|||.+ .+.+.+|++++|++ |++++.|+
T Consensus 145 qRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd~~-~~~~~ad~v~vl~~-G~i~~~g~ 222 (235)
T COG1122 145 QRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHDLE-LVLEYADRVVVLDD-GKILADGD 222 (235)
T ss_pred eeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCcHH-HHHhhCCEEEEEEC-CEEeecCC
Confidence 9999999999999999999999999999999999999999877 689999999976 47788999999986 78999997
Q ss_pred C
Q 045902 1108 L 1108 (1472)
Q Consensus 1108 ~ 1108 (1472)
+
T Consensus 223 p 223 (235)
T COG1122 223 P 223 (235)
T ss_pred H
Confidence 5
No 120
>COG1124 DppF ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=2.1e-36 Score=324.90 Aligned_cols=198 Identities=27% Similarity=0.372 Sum_probs=164.9
Q ss_pred eeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeEEeccCCC--CCCC
Q 045902 904 QLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE----TFARISGYCEQNDI--HSPN 977 (1472)
Q Consensus 904 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~----~~~~~~gyv~Q~~~--~~~~ 977 (1472)
.+|+||||+|.+||++||+|+||||||||.++|+|...+ .+|+|.++|.+.... .+.+.+.+|+||+. +.|.
T Consensus 21 ~~l~~VS~~i~~Ge~lgivGeSGsGKSTL~r~l~Gl~~p--~~G~I~~~G~~~~~~~~~~~~~~~VQmVFQDp~~SLnP~ 98 (252)
T COG1124 21 HALNNVSLEIERGETLGIVGESGSGKSTLARLLAGLEKP--SSGSILLDGKPLAPKKRAKAFYRPVQMVFQDPYSSLNPR 98 (252)
T ss_pred hhhcceeEEecCCCEEEEEcCCCCCHHHHHHHHhcccCC--CCceEEECCcccCccccchhhccceeEEecCCccccCcc
Confidence 599999999999999999999999999999999998774 589999999875432 46778999999984 6689
Q ss_pred CCHHHHHHHHHHcCC-C-chHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 045902 978 VTIYESLLYSAWLRL-P-KDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1055 (1472)
Q Consensus 978 lTv~e~l~~~~~l~~-~-~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~ 1055 (1472)
.||.+.|.-...... + ....+.++++.+||..-. +... +..||||||||++|||||+.+|++|+||||||+||+
T Consensus 99 ~tv~~~l~Epl~~~~~~~~~~~i~~~L~~VgL~~~~--l~R~--P~eLSGGQ~QRiaIARAL~~~PklLIlDEptSaLD~ 174 (252)
T COG1124 99 RTVGRILSEPLRPHGLSKSQQRIAELLDQVGLPPSF--LDRR--PHELSGGQRQRIAIARALIPEPKLLILDEPTSALDV 174 (252)
T ss_pred hhHHHHHhhhhccCCccHHHHHHHHHHHHcCCCHHH--HhcC--chhcChhHHHHHHHHHHhccCCCEEEecCchhhhcH
Confidence 999999875544321 1 123466677777765321 1122 347999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1056 RAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1056 ~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
..+.+|+++|.++.++ |.|.|+++||.+. +...|||+++|++ |+++..+|.+
T Consensus 175 siQa~IlnlL~~l~~~~~lt~l~IsHdl~~-v~~~cdRi~Vm~~-G~ivE~~~~~ 227 (252)
T COG1124 175 SVQAQILNLLLELKKERGLTYLFISHDLAL-VEHMCDRIAVMDN-GQIVEIGPTE 227 (252)
T ss_pred HHHHHHHHHHHHHHHhcCceEEEEeCcHHH-HHHHhhheeeeeC-CeEEEeechh
Confidence 9999999999999865 7899999999764 7778999999986 7999999864
No 121
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=9.2e-36 Score=336.58 Aligned_cols=198 Identities=26% Similarity=0.374 Sum_probs=168.0
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hc-ccceeEEeccCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ET-FARISGYCEQNDIHSPN 977 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~-~~~~~gyv~Q~~~~~~~ 977 (1472)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... .. .++.++|++|++.+++.
T Consensus 12 ~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 12 KRKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVK--PDSGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred CEEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 3569999999999999999999999999999999999876 358999999987532 12 23468999999999999
Q ss_pred CCHHHHHHHHHHcCCCc----hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 978 VTIYESLLYSAWLRLPK----DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 978 lTv~e~l~~~~~l~~~~----~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
+|++|++.+....+... ...++++++.+++.+..++.. ..||||||||++||++|+.+|++|+|||||+||
T Consensus 90 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 164 (232)
T cd03218 90 LTVEENILAVLEIRGLSKKEREEKLEELLEEFHITHLRKSKA-----SSLSGGERRRVEIARALATNPKFLLLDEPFAGV 164 (232)
T ss_pred CcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccC
Confidence 99999998764433221 134567788888876655543 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1054 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 165 D~~~~~~~~~~l~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 217 (232)
T cd03218 165 DPIAVQDIQKIIKILKDRGIGVLITDHNVR-ETLSITDRAYIIYE-GKVLAEGTP 217 (232)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEEEeCH
Confidence 999999999999999877999999999986 57888999999985 788888875
No 122
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.3e-36 Score=325.08 Aligned_cols=221 Identities=28% Similarity=0.369 Sum_probs=184.9
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCC----ceEEEEcCCCCCC
Q 045902 184 RKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQ----RTCAYISQHDLHH 259 (1472)
Q Consensus 184 ~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 259 (1472)
...++++|||+++++||+++|+||||||||||+|+|+|.++|+ +|+|.++|++++...++ ..++.-+|...+|
T Consensus 15 GGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P~---~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rlF 91 (250)
T COG0411 15 GGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKPS---SGTVIFRGRDITGLPPHRIARLGIARTFQITRLF 91 (250)
T ss_pred CCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccCC---CceEEECCcccCCCCHHHHHhccceeeccccccc
Confidence 3467999999999999999999999999999999999999998 99999999999988764 4578899999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
++|||.||+..++..+.. +...-...+.. .+.++. ......+|+.+||.+++|+..|+
T Consensus 92 ~~lTVlENv~va~~~~~~---~~~~l~~~~~~--------~~e~~~-----------~e~A~~~Le~vgL~~~a~~~A~~ 149 (250)
T COG0411 92 PGLTVLENVAVGAHARLG---LSGLLGRPRAR--------KEEREA-----------RERARELLEFVGLGELADRPAGN 149 (250)
T ss_pred CCCcHHHHHHHHhhhhhh---hhhhhccccch--------hhHHHH-----------HHHHHHHHHHcCCchhhcchhhc
Confidence 999999999988654421 00000000000 000111 11245689999999999999987
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
||+|||||+.|||||+.+|++|+||||.+||.+..+.++.+.++++.+..+.|++++- |...-+.+++|||+||
T Consensus 150 -----LsyG~qR~LEIArALa~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIE-HdM~~Vm~l~dri~Vl 223 (250)
T COG0411 150 -----LSYGQQRRLEIARALATQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIE-HDMKLVMGLADRIVVL 223 (250)
T ss_pred -----CChhHhHHHHHHHHHhcCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEE-eccHHHhhhccEEEec
Confidence 9999999999999999999999999999999999999999999999886678877755 5677899999999999
Q ss_pred cCCeEEEecChhHHHH
Q 045902 420 SEGEIVYQGPREYVLD 435 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~~ 435 (1472)
+.|+++.+|+++++.+
T Consensus 224 ~~G~~IAeG~P~eV~~ 239 (250)
T COG0411 224 NYGEVIAEGTPEEVRN 239 (250)
T ss_pred cCCcCcccCCHHHHhc
Confidence 9999999999999853
No 123
>PRK11153 metN DL-methionine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.7e-36 Score=353.56 Aligned_cols=214 Identities=22% Similarity=0.335 Sum_probs=177.0
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+.. ...++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~i~~l~~~y~~---------~~~~~~il~~vsl~i~~Gei~~iiG~nGsGKSTLlk~L~Gl~~--p~~G~I~~~g~~i~ 70 (343)
T PRK11153 2 IELKNISKVFPQ---------GGRTIHALNNVSLHIPAGEIFGVIGASGAGKSTLIRCINLLER--PTSGRVLVDGQDLT 70 (343)
T ss_pred EEEEeEEEEeCC---------CCCceEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 456777665421 0113579999999999999999999999999999999999877 35899999998764
Q ss_pred h---h---cccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHH
Q 045902 958 Q---E---TFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQ 1027 (1472)
Q Consensus 958 ~---~---~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGq 1027 (1472)
. . ..++.+||++|++.+++.+||+||+.+....+. +.. ..++++++.+++.+..++.. ..|||||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq 145 (343)
T PRK11153 71 ALSEKELRKARRQIGMIFQHFNLLSSRTVFDNVALPLELAGTPKAEIKARVTELLELVGLSDKADRYP-----AQLSGGQ 145 (343)
T ss_pred cCCHHHHHHHhcCEEEEeCCCccCCCCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCHHH
Confidence 2 1 235679999999999999999999988754432 221 34667888888877666543 4799999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1028 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1028 rqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
|||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |++++.|
T Consensus 146 ~qRv~lAraL~~~p~iLlLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiilvtH~~~-~i~~~~d~v~~l~~-G~i~~~g 223 (343)
T PRK11153 146 KQRVAIARALASNPKVLLCDEATSALDPATTRSILELLKDINRELGLTIVLITHEMD-VVKRICDRVAVIDA-GRLVEQG 223 (343)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEc
Confidence 99999999999999999999999999999999999999999765 899999999976 46778999999985 7899988
Q ss_pred CCC
Q 045902 1107 PLG 1109 (1472)
Q Consensus 1107 ~~~ 1109 (1472)
+..
T Consensus 224 ~~~ 226 (343)
T PRK11153 224 TVS 226 (343)
T ss_pred CHH
Confidence 753
No 124
>PRK10851 sulfate/thiosulfate transporter subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=352.67 Aligned_cols=210 Identities=28% Similarity=0.433 Sum_probs=177.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|+++....+ ++.++||+|++.++|.+||
T Consensus 15 ~~~l~~isl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~i~~v~Q~~~l~p~~tv 91 (353)
T PRK10851 15 TQVLNDISLDIPSGQMVALLGPSGSGKTTLLRIIAGLEHQT---SGHIRFHGTDVSRLHARDRKVGFVFQHYALFRHMTV 91 (353)
T ss_pred eEEEEEeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHCCEEEEecCcccCCCCcH
Confidence 35999999999999999999999999999999999999987 8999999999876544 3679999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.|+.+....... .++.+ . ...++.+++.+||++..|..+. .
T Consensus 92 ~eni~~~~~~~~~~~~------~~~~~----------~--------------~~~~~~~l~~~~L~~~~~~~~~-----~ 136 (353)
T PRK10851 92 FDNIAFGLTVLPRRER------PNAAA----------I--------------KAKVTQLLEMVQLAHLADRYPA-----Q 136 (353)
T ss_pred HHHHHhhhhhcccccC------CCHHH----------H--------------HHHHHHHHHHcCCchhhhCChh-----h
Confidence 9999987543110000 00000 0 0124568899999888876665 5
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 137 LSgGq~QRvalArAL~~~P~llLLDEP~s~LD~~~r~~l~~~L~~l~~~~g~tii~vTHd~-~ea~~~~Dri~vl~~G~i 215 (353)
T PRK10851 137 LSGGQKQRVALARALAVEPQILLLDEPFGALDAQVRKELRRWLRQLHEELKFTSVFVTHDQ-EEAMEVADRVVVMSQGNI 215 (353)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876688888877654 588899999999999999
Q ss_pred EEecChhHHH
Q 045902 425 VYQGPREYVL 434 (1472)
Q Consensus 425 v~~G~~~~~~ 434 (1472)
++.|+++++.
T Consensus 216 ~~~g~~~~i~ 225 (353)
T PRK10851 216 EQAGTPDQVW 225 (353)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 125
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=9.2e-36 Score=333.34 Aligned_cols=194 Identities=30% Similarity=0.452 Sum_probs=166.0
Q ss_pred eeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCCHH
Q 045902 904 QLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 904 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+||.
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 96 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLE--PDAGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTAR 96 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCHH
Confidence 69999999999999999999999999999999999876 358999999987643 23456799999999989999999
Q ss_pred HHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHH
Q 045902 982 ESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1057 (1472)
Q Consensus 982 e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~ 1057 (1472)
||+.+....+. +. ...++++++.+++.+..+..+ ..||||||||++||+||+.+|++|+|||||+|||+.+
T Consensus 97 e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~ 171 (218)
T cd03266 97 ENLEYFAGLYGLKGDELTARLEELADRLGMEELLDRRV-----GGFSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMA 171 (218)
T ss_pred HHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhhhh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHH
Confidence 99987654332 21 134677888888877666543 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1058 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1058 ~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
+..+.+.|+++.++|+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 172 ~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~-G~i~~~~ 218 (218)
T cd03266 172 TRALREFIRQLRALGKCILFSTHIMQ-EVERLCDRVVVLHR-GRVVYEG 218 (218)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEeecC
Confidence 99999999999877999999999976 56778999999986 6776543
No 126
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=5.7e-36 Score=358.76 Aligned_cols=210 Identities=27% Similarity=0.364 Sum_probs=178.8
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+ +++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 4 L~~~nls~~y-------------~~~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~--p~sG~I~l~G~~i~ 68 (402)
T PRK09536 4 IDVSDLSVEF-------------GDTTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLT--PTAGTVLVAGDDVE 68 (402)
T ss_pred EEEeeEEEEE-------------CCEEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCC--CCCcEEEECCEEcC
Confidence 5566766543 34679999999999999999999999999999999999877 45899999998764
Q ss_pred h---hcccceeEEeccCCCCCCCCCHHHHHHHHHHc-----CC-Cc--hHHHHHHHHHcccccccccccCCCCCCCCCHH
Q 045902 958 Q---ETFARISGYCEQNDIHSPNVTIYESLLYSAWL-----RL-PK--DMFVEEVMELVEMKALRNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 958 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l-----~~-~~--~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgG 1026 (1472)
. ...++.+||++|+..+++.+||+|++.+.... .. .. ...++++++.+++.++.++.+ +.||||
T Consensus 69 ~~~~~~~~~~ig~v~q~~~l~~~~tv~e~v~~~~~~~~~~~~~~~~~~~~~v~~~le~vgl~~~~~~~~-----~~LSgG 143 (402)
T PRK09536 69 ALSARAASRRVASVPQDTSLSFEFDVRQVVEMGRTPHRSRFDTWTETDRAAVERAMERTGVAQFADRPV-----TSLSGG 143 (402)
T ss_pred cCCHHHHhcceEEEccCCCCCCCCCHHHHHHhccchhcccccCCCHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHH
Confidence 3 34567899999999998999999999875321 11 11 245778889999888777654 479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||+.|||||+++|++|+|||||+|||+.++..+++.|++++++|+|||+++|+++ ++.+.||++++|++ |++++.|
T Consensus 144 erQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~~g~TIIivsHdl~-~~~~~adrii~l~~-G~iv~~G 221 (402)
T PRK09536 144 ERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVDDGKTAVAAIHDLD-LAARYCDELVLLAD-GRVRAAG 221 (402)
T ss_pred HHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEec
Confidence 999999999999999999999999999999999999999999877999999999986 47789999999985 7889999
Q ss_pred CCC
Q 045902 1107 PLG 1109 (1472)
Q Consensus 1107 ~~~ 1109 (1472)
+..
T Consensus 222 ~~~ 224 (402)
T PRK09536 222 PPA 224 (402)
T ss_pred CHH
Confidence 864
No 127
>TIGR01186 proV glycine betaine/L-proline transport ATP binding subunit. This model describes the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. Functionally, this transport system is involved in osmoregulation. Under conditions of stress, the organism recruits these transport system to accumulate glycine betaine and other solutes which offer osmo-protection. It has been demonstrated that glycine betaine uptake is accompanied by symport with sodium ions. The locus has been named variously as proU or opuA. A gene library from L.lact
Probab=100.00 E-value=7.3e-36 Score=353.76 Aligned_cols=200 Identities=24% Similarity=0.312 Sum_probs=171.7
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcc----cceeEEeccCCC
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETF----ARISGYCEQNDI 973 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~----~~~~gyv~Q~~~ 973 (1472)
+++.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ... ++.+|||+|+..
T Consensus 4 ~~~~~l~~vs~~i~~Gei~~l~G~sGsGKSTLLr~L~Gl~~--p~~G~I~i~G~~i~~~~~~~~~~~rr~~i~~v~Q~~~ 81 (363)
T TIGR01186 4 GGKKGVNDADLAIAKGEIFVIMGLSGSGKSTTVRMLNRLIE--PTAGQIFIDGENIMKQSPVELREVRRKKIGMVFQQFA 81 (363)
T ss_pred CCceeEEeeEEEEcCCCEEEEECCCCChHHHHHHHHhCCCC--CCceEEEECCEECCcCCHHHHHHHHhCcEEEEECCCc
Confidence 34679999999999999999999999999999999999987 458999999988643 222 568999999999
Q ss_pred CCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 045902 974 HSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEP 1049 (1472)
Q Consensus 974 ~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEP 1049 (1472)
++|.+||+||+.|...... +.. +.+.++++.++|.+..++.. ..|||||||||+|||||+.+|+||+||||
T Consensus 82 l~~~~TV~eNi~~~~~~~~~~~~~~~~~~~~~l~~vgL~~~~~~~p-----~~LSGGq~QRV~lARAL~~~p~iLLlDEP 156 (363)
T TIGR01186 82 LFPHMTILQNTSLGPELLGWPEQERKEKALELLKLVGLEEYEHRYP-----DELSGGMQQRVGLARALAAEPDILLMDEA 156 (363)
T ss_pred CCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHhcCCchhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 9999999999998765432 222 44667788888876666543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1050 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1050 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
|+|||+.++..+.+.++++.++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+..
T Consensus 157 ~saLD~~~r~~l~~~l~~l~~~~~~Tii~vTHd~~-ea~~~~drI~vl~~-G~iv~~g~~~ 215 (363)
T TIGR01186 157 FSALDPLIRDSMQDELKKLQATLQKTIVFITHDLD-EAIRIGDRIVIMKA-GEIVQVGTPD 215 (363)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEeeCCHH
Confidence 9999999999999999999754 899999999976 47788999999985 7899998753
No 128
>COG1122 CbiO ABC-type cobalt transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.2e-35 Score=330.17 Aligned_cols=207 Identities=27% Similarity=0.379 Sum_probs=178.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCC----CCCCceEEEEcCCC-CCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTE----FVPQRTCAYISQHD-LHHG 260 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~----~~~~~~~~yv~Q~d-~~~~ 260 (1472)
..+|+|+|+.+++|+.++|+||||||||||+++|+|.+.|. +|+|.++|.+... ...++.+|||+|++ ..+.
T Consensus 17 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTL~~~l~GLl~p~---~G~v~~~g~~~~~~~~~~~~~~~vG~VfQnpd~q~~ 93 (235)
T COG1122 17 KAALKDVSLEIEKGERVLLIGPNGSGKSTLLKLLNGLLKPT---SGEVLVDGLDTSSEKSLLELRQKVGLVFQNPDDQLF 93 (235)
T ss_pred ceeeeeeEEEECCCCEEEEECCCCCCHHHHHHHHcCcCcCC---CCEEEECCeeccchhhHHHhhcceEEEEECcccccc
Confidence 57999999999999999999999999999999999999998 8999999998762 23367899999996 4456
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
.-||.|.++|+.+..+.... ++ ...++.+++.+||.+.+|..+-
T Consensus 94 ~~tV~~evafg~~n~g~~~~--------------------e~--------------~~rv~~~l~~vgl~~~~~r~p~-- 137 (235)
T COG1122 94 GPTVEDEVAFGLENLGLPRE--------------------EI--------------EERVAEALELVGLEELLDRPPF-- 137 (235)
T ss_pred cCcHHHHHhhchhhcCCCHH--------------------HH--------------HHHHHHHHHHcCchhhccCCcc--
Confidence 67999999999776554210 01 1135678999999999887665
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
.|||||||||+||.+|+.+|++|+|||||+|||+..+.++++.++++.+..+.|+|++.|+ ...+.+++|++++|+
T Consensus 138 ---~LSGGqkqRvaIA~vLa~~P~iliLDEPta~LD~~~~~~l~~~l~~L~~~~~~tii~~tHd-~~~~~~~ad~v~vl~ 213 (235)
T COG1122 138 ---NLSGGQKQRVAIAGVLAMGPEILLLDEPTAGLDPKGRRELLELLKKLKEEGGKTIIIVTHD-LELVLEYADRVVVLD 213 (235)
T ss_pred ---ccCCcceeeHHhhHHHHcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCeEEEEeCc-HHHHHhhCCEEEEEE
Confidence 4999999999999999999999999999999999999999999999998777888887654 668889999999999
Q ss_pred CCeEEEecChhHHHH
Q 045902 421 EGEIVYQGPREYVLD 435 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~~ 435 (1472)
+|+++++|+++++.+
T Consensus 214 ~G~i~~~g~p~~i~~ 228 (235)
T COG1122 214 DGKILADGDPAEIFN 228 (235)
T ss_pred CCEEeecCCHHHHhh
Confidence 999999999877653
No 129
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=7.7e-36 Score=336.06 Aligned_cols=197 Identities=27% Similarity=0.344 Sum_probs=165.9
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCC-----CCCeeEEEEEEcCccCCh-----hcccceeEEeccCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRK-----TGGYIEGSISISGYPKKQ-----ETFARISGYCEQND 972 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~-----~~~~~~G~i~i~G~~~~~-----~~~~~~~gyv~Q~~ 972 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|.. + +.+|+|.++|.+... ..+++.++|++|++
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~ 90 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGA--PDEGEVLLDGKDIYDLDVDVLELRRRVGMVFQKP 90 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCC--CCCeEEEECCEEhhhcchHHHHHHhhEEEEecCc
Confidence 46999999999999999999999999999999999987 4 458999999987532 23456789999998
Q ss_pred CCCCCCCHHHHHHHHHHcCC-Cc----hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 045902 973 IHSPNVTIYESLLYSAWLRL-PK----DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMD 1047 (1472)
Q Consensus 973 ~~~~~lTv~e~l~~~~~l~~-~~----~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LD 1047 (1472)
.++ .+||+||+.+....+. .. +..++++++.+++.+..+.... +..||||||||++||++|+.+|++|+||
T Consensus 91 ~~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~---~~~LSgG~~qrv~la~al~~~p~llllD 166 (227)
T cd03260 91 NPF-PGSIYDNVAYGLRLHGIKLKEELDERVEEALRKAALWDEVKDRLH---ALGLSGGQQQRLCLARALANEPEVLLLD 166 (227)
T ss_pred hhc-cccHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCChHHhccCC---cccCCHHHHHHHHHHHHHhcCCCEEEEe
Confidence 887 7999999988654332 11 2345677888888765554320 2479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1048 EPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1048 EPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|||+|||+.++..+++.|++++++ +|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 167 EPt~~LD~~~~~~l~~~l~~~~~~-~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 224 (227)
T cd03260 167 EPTSALDPISTAKIEELIAELKKE-YTIVIVTHNMQ-QAARVADRTAFLLN-GRLVEFGPT 224 (227)
T ss_pred CCCccCCHHHHHHHHHHHHHHhhC-cEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEecCc
Confidence 999999999999999999999877 99999999976 46778999999985 788888875
No 130
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-35 Score=355.65 Aligned_cols=210 Identities=25% Similarity=0.365 Sum_probs=177.7
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+ +++.+|+|+|++|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~i~~l~~~~-------------~~~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~--p~~G~I~~~g~~i~ 68 (369)
T PRK11000 4 VTLRNVTKAY-------------GDVVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLED--ITSGDLFIGEKRMN 68 (369)
T ss_pred EEEEEEEEEe-------------CCeEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEECC
Confidence 5667776554 23569999999999999999999999999999999999876 35899999998764
Q ss_pred h-hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHH
Q 045902 958 Q-ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLT 1032 (1472)
Q Consensus 958 ~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~ 1032 (1472)
. ...++.+||++|+..+++.+||+||+.|....+. +.. ..++++++.+++.+..++.. ..|||||||||+
T Consensus 69 ~~~~~~~~i~~v~Q~~~l~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~lgL~~~~~~~~-----~~LSgGq~QRva 143 (369)
T PRK11000 69 DVPPAERGVGMVFQSYALYPHLSVAENMSFGLKLAGAKKEEINQRVNQVAEVLQLAHLLDRKP-----KALSGGQRQRVA 143 (369)
T ss_pred CCCHhHCCEEEEeCCcccCCCCCHHHHHHhHHhhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHH
Confidence 3 2234679999999999999999999998765432 222 35677888888877666553 479999999999
Q ss_pred HHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1033 IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1033 iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 144 LAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~~-~~~~~~d~i~vl~~-G~i~~~g~~~ 219 (369)
T PRK11000 144 IGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQV-EAMTLADKIVVLDA-GRVAQVGKPL 219 (369)
T ss_pred HHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEEcCHH
Confidence 999999999999999999999999999999999999765 899999999976 57788999999985 7899988753
No 131
>TIGR01188 drrA daunorubicin resistance ABC transporter ATP-binding subunit. This model describes daunorubicin resistance ABC transporter, ATP binding subunit in bacteria and archaea. This model is restricted in its scope to preferentially recognize the ATP binding subunit associated with effux of the drug, daunorubicin. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporter is the obligatory coupling of ATP hydrolysis to substrate translocation. The minimal configuration of bacterial ABC transport system: an ATPase or ATP binding subunit; An integral membrane protein; a hydrophilic polypetpide, which likely functions as substrate binding protein. In eukaryotes proteins of similar function include p-gyco proteins, multidrug resistance protein etc.
Probab=100.00 E-value=9.6e-36 Score=348.74 Aligned_cols=206 Identities=27% Similarity=0.414 Sum_probs=176.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 263 (1472)
+.+|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 6 ~~~l~~vs~~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 82 (302)
T TIGR01188 6 FKAVDGVNFKVREGEVFGFLGPNGAGKTTTIRMLTTLLRPT---SGTARVAGYDVVREPRKVRRSIGIVPQYASVDEDLT 82 (302)
T ss_pred eeEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCHHHHHhhcEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999987 899999999875421 1356999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.+.++..+... .+ . ...++.+++.+||++..|+.+++
T Consensus 83 v~e~l~~~~~~~~~~~----------~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~---- 124 (302)
T TIGR01188 83 GRENLEMMGRLYGLPK----------DE----------A--------------EERAEELLELFELGEAADRPVGT---- 124 (302)
T ss_pred HHHHHHHHHHHcCCCH----------HH----------H--------------HHHHHHHHHHcCChhHhCCchhh----
Confidence 9999998655432110 00 0 00235688999999888887765
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .|.|+|++.|++ .++.+++|+|++|++|+
T Consensus 125 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~tvi~~sH~~-~~~~~~~d~v~~l~~G~ 201 (302)
T TIGR01188 125 -YSGGMRRRLDIAASLIHQPDVLFLDEPTTGLDPRTRRAIWDYIRALKE-EGVTILLTTHYM-EEADKLCDRIAIIDHGR 201 (302)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEECCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999976 478988887765 47888999999999999
Q ss_pred EEEecChhHHHH
Q 045902 424 IVYQGPREYVLD 435 (1472)
Q Consensus 424 iv~~G~~~~~~~ 435 (1472)
+++.|+.+++..
T Consensus 202 i~~~g~~~~l~~ 213 (302)
T TIGR01188 202 IIAEGTPEELKR 213 (302)
T ss_pred EEEECCHHHHHH
Confidence 999999988754
No 132
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=1.7e-35 Score=332.22 Aligned_cols=197 Identities=24% Similarity=0.360 Sum_probs=170.9
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYE 982 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 982 (1472)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... .+.++|++|++.+++.+|++|
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~~ 89 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILR--PTSGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTARE 89 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEeccccc-cccEEEEcCCCCccccCCHHH
Confidence 569999999999999999999999999999999999876 45899999998764322 256899999998888999999
Q ss_pred HHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHH
Q 045902 983 SLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1062 (1472)
Q Consensus 983 ~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~ 1062 (1472)
|+.+....+...+..+.++++.+++.+..+... ..||||||||++||++|+.+|++|+|||||+|||+.++..++
T Consensus 90 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~ 164 (223)
T TIGR03740 90 NLKVHTTLLGLPDSRIDEVLNIVDLTNTGKKKA-----KQFSLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELR 164 (223)
T ss_pred HHHHHHHHcCCCHHHHHHHHHHcCCcHHHhhhH-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHH
Confidence 998765443333456778889999887666543 479999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1063 RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1063 ~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+.|++++++|+|||++||+++ ++.+.+|++++|.+ |++++.|++.
T Consensus 165 ~~L~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~~ 209 (223)
T TIGR03740 165 ELIRSFPEQGITVILSSHILS-EVQQLADHIGIISE-GVLGYQGKIN 209 (223)
T ss_pred HHHHHHHHCCCEEEEEcCCHH-HHHHhcCEEEEEeC-CEEEEecChh
Confidence 999999877999999999986 46788999999985 7899988864
No 133
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-35 Score=354.99 Aligned_cols=206 Identities=24% Similarity=0.330 Sum_probs=177.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|+.+++ +|+|.++|+++....+ ++.++||+|++.+||.+||
T Consensus 32 ~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~p~---~G~I~i~g~~i~~~~~~~r~ig~vfQ~~~lfp~ltv 108 (377)
T PRK11607 32 QHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQPT---AGQIMLDGVDLSHVPPYQRPINMMFQSYALFPHMTV 108 (377)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHHHCCEEEEeCCCccCCCCCH
Confidence 35899999999999999999999999999999999999988 8999999999876544 4689999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
.||+.|+.+..+.. +.+ . ...++.+++.+||.+..|..+. .
T Consensus 109 ~eNi~~~l~~~~~~----------~~~----------~--------------~~~v~~~l~~l~L~~~~~~~~~-----~ 149 (377)
T PRK11607 109 EQNIAFGLKQDKLP----------KAE----------I--------------ASRVNEMLGLVHMQEFAKRKPH-----Q 149 (377)
T ss_pred HHHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHHcCCchhhcCChh-----h
Confidence 99999975432210 000 0 0124568899999988776665 5
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+|||||+.+|++|+|||||++||..++.++.+.|+++.+..+.|+|++.|++ .++..++|+|++|++|++
T Consensus 150 LSgGq~QRVaLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~-~ea~~laDri~vl~~G~i 228 (377)
T PRK11607 150 LSGGQRQRVALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQ-EEAMTMAGRIAIMNRGKF 228 (377)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCH-HHHHHhCCEEEEEeCCEE
Confidence 9999999999999999999999999999999999999999999998776788988887664 588899999999999999
Q ss_pred EEecChhHHH
Q 045902 425 VYQGPREYVL 434 (1472)
Q Consensus 425 v~~G~~~~~~ 434 (1472)
+..|+++++.
T Consensus 229 ~~~g~~~~~~ 238 (377)
T PRK11607 229 VQIGEPEEIY 238 (377)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 134
>PRK11607 potG putrescine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.9e-35 Score=353.16 Aligned_cols=211 Identities=25% Similarity=0.376 Sum_probs=179.7
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|++..+ ++..+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+.
T Consensus 19 ~l~l~~v~~~~-------------~~~~~l~~vsl~i~~Ge~~~llGpsGsGKSTLLr~IaGl~~--p~~G~I~i~g~~i 83 (377)
T PRK11607 19 LLEIRNLTKSF-------------DGQHAVDDVSLTIYKGEIFALLGASGCGKSTLLRMLAGFEQ--PTAGQIMLDGVDL 83 (377)
T ss_pred eEEEEeEEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 47778876654 23469999999999999999999999999999999999977 4589999999876
Q ss_pred Ch-hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHH
Q 045902 957 KQ-ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRL 1031 (1472)
Q Consensus 957 ~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl 1031 (1472)
.. ...+|.+||++|+..++|++||.||+.|....+. +.. ..++++++.+++.++.++.. ..|||||||||
T Consensus 84 ~~~~~~~r~ig~vfQ~~~lfp~ltv~eNi~~~l~~~~~~~~~~~~~v~~~l~~l~L~~~~~~~~-----~~LSgGq~QRV 158 (377)
T PRK11607 84 SHVPPYQRPINMMFQSYALFPHMTVEQNIAFGLKQDKLPKAEIASRVNEMLGLVHMQEFAKRKP-----HQLSGGQRQRV 158 (377)
T ss_pred CCCCHHHCCEEEEeCCCccCCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHH
Confidence 43 2346789999999999999999999998765432 222 35677888888877766553 47999999999
Q ss_pred HHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1032 TIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1032 ~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|+|++|||++ ++...+|++++|++ |+++..|+..
T Consensus 159 aLARAL~~~P~lLLLDEP~s~LD~~~r~~l~~~l~~l~~~~g~tii~vTHd~~-ea~~laDri~vl~~-G~i~~~g~~~ 235 (377)
T PRK11607 159 ALARSLAKRPKLLLLDEPMGALDKKLRDRMQLEVVDILERVGVTCVMVTHDQE-EAMTMAGRIAIMNR-GKFVQIGEPE 235 (377)
T ss_pred HHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEcCCHH-HHHHhCCEEEEEeC-CEEEEEcCHH
Confidence 9999999999999999999999999999999999998654 899999999976 67889999999985 7999999863
No 135
>COG4152 ABC-type uncharacterized transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=3.1e-36 Score=319.80 Aligned_cols=201 Identities=24% Similarity=0.397 Sum_probs=179.2
Q ss_pred ccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCC
Q 045902 899 EENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 899 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~l 978 (1472)
+++++.+++|+||.++||+++|++|||||||||++++|+|... +.+|+|.++|.+..+.. +.+|||.|.+..+++.+
T Consensus 11 ~Fg~k~av~~isf~v~~G~i~GllG~NGAGKTTtfRmILglle--~~~G~I~~~g~~~~~~~-~~rIGyLPEERGLy~k~ 87 (300)
T COG4152 11 SFGDKKAVDNISFEVPPGEIFGLLGPNGAGKTTTFRMILGLLE--PTEGEITWNGGPLSQEI-KNRIGYLPEERGLYPKM 87 (300)
T ss_pred ccCceeeecceeeeecCCeEEEeecCCCCCccchHHHHhccCC--ccCceEEEcCcchhhhh-hhhcccChhhhccCccC
Confidence 4567889999999999999999999999999999999999987 45999999999987543 45689999999999999
Q ss_pred CHHHHHHHHHHcCCCch----HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 045902 979 TIYESLLYSAWLRLPKD----MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1054 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~~~~----~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD 1054 (1472)
||.|.|.|.|.++.-+. ...+..++.+++.+.....+ ..||.|++|++.+-.+++++|++++||||+||||
T Consensus 88 tv~dql~yla~LkGm~~~e~~~~~~~wLer~~i~~~~~~kI-----k~LSKGnqQKIQfisaviHePeLlILDEPFSGLD 162 (300)
T COG4152 88 TVEDQLKYLAELKGMPKAEIQKKLQAWLERLEIVGKKTKKI-----KELSKGNQQKIQFISAVIHEPELLILDEPFSGLD 162 (300)
T ss_pred cHHHHHHHHHHhcCCcHHHHHHHHHHHHHhccccccccchH-----HHhhhhhhHHHHHHHHHhcCCCEEEecCCccCCC
Confidence 99999999999975433 34566788888887776654 5799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1055 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1055 ~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
|.+.+.+.+.+.++++.|.|||+++|+++ .+-++||++++|++ |+.|..|++.
T Consensus 163 PVN~elLk~~I~~lk~~GatIifSsH~Me-~vEeLCD~llmL~k-G~~V~~G~v~ 215 (300)
T COG4152 163 PVNVELLKDAIFELKEEGATIIFSSHRME-HVEELCDRLLMLKK-GQTVLYGTVE 215 (300)
T ss_pred hhhHHHHHHHHHHHHhcCCEEEEecchHH-HHHHHhhhhheecC-CceEEeccHH
Confidence 99999999999999999999999999986 68889999999986 7888889863
No 136
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=9.8e-36 Score=338.35 Aligned_cols=197 Identities=29% Similarity=0.388 Sum_probs=165.8
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQNDIHSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~~~~~ 976 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 91 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVE--PTSGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLIE 91 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCCceEEECCEeccccCHhHHHHHHhccEEEcccCcccc
Confidence 569999999999999999999999999999999999876 358999999987542 234567899999999999
Q ss_pred CCCHHHHHHHHHHc---------CCCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 045902 977 NVTIYESLLYSAWL---------RLPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSII 1044 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l---------~~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il 1044 (1472)
.+||+||+.+.... .... .+.++++++.+++.+..+.. +..||||||||++||++|+.+|++|
T Consensus 92 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~ll 166 (241)
T cd03256 92 RLSVLENVLSGRLGRRSTWRSLFGLFPKEEKQRALAALERVGLLDKAYQR-----ADQLSGGQQQRVAIARALMQQPKLI 166 (241)
T ss_pred cCcHHHHHHhhhcccchhhhhhcccCcHHHHHHHHHHHHHcCChhhhCCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999764321 1111 13456677888876655543 3479999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1045 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1045 ~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 167 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 229 (241)
T cd03256 167 LADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGLKD-GRIVFDGPP 229 (241)
T ss_pred EEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeecCH
Confidence 999999999999999999999999764 899999999986 46678999999985 788888875
No 137
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.5e-35 Score=334.98 Aligned_cols=196 Identities=28% Similarity=0.378 Sum_probs=167.3
Q ss_pred eeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh------cccceeEEeccCCCCCCC
Q 045902 904 QLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE------TFARISGYCEQNDIHSPN 977 (1472)
Q Consensus 904 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~------~~~~~~gyv~Q~~~~~~~ 977 (1472)
.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLER--PTSGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLSS 96 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEccCcccCCC
Confidence 69999999999999999999999999999999999877 3589999999876421 235678999999999999
Q ss_pred CCHHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 978 VTIYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 978 lTv~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
+|+.||+.+....+. .. ...++++++.+++.+..+... ..||||||||++||++|+.+|++|+|||||+||
T Consensus 97 ~t~~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDEP~~~L 171 (233)
T cd03258 97 RTVFENVALPLEIAGVPKAEIEERVLELLELVGLEDKADAYP-----AQLSGGQKQRVGIARALANNPKVLLCDEATSAL 171 (233)
T ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEecCCCCcC
Confidence 999999987654332 11 134567788888876665543 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1054 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 172 D~~~~~~l~~~l~~~~~~~~~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 225 (233)
T cd03258 172 DPETTQSILALLRDINRELGLTIVLITHEME-VVKRICDRVAVMEK-GEVVEEGTV 225 (233)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999765 899999999976 46778999999985 788888864
No 138
>COG0411 LivG ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=2.8e-36 Score=324.42 Aligned_cols=202 Identities=27% Similarity=0.406 Sum_probs=175.6
Q ss_pred ccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCCCC
Q 045902 899 EENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQNDIH 974 (1472)
Q Consensus 899 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~~~ 974 (1472)
.++...+++|||+++++||++||+||||||||||+|+|+|..++ .+|+|.++|.++.. ...+.-++.-+|...+
T Consensus 13 ~FGGl~Al~~Vsl~v~~Gei~~LIGPNGAGKTTlfNlitG~~~P--~~G~v~~~G~~it~l~p~~iar~Gi~RTFQ~~rl 90 (250)
T COG0411 13 RFGGLTAVNDVSLEVRPGEIVGLIGPNGAGKTTLFNLITGFYKP--SSGTVIFRGRDITGLPPHRIARLGIARTFQITRL 90 (250)
T ss_pred ecCCEEEEeceeEEEcCCeEEEEECCCCCCceeeeeeecccccC--CCceEEECCcccCCCCHHHHHhccceeecccccc
Confidence 34678899999999999999999999999999999999999874 58999999998643 2234457888999999
Q ss_pred CCCCCHHHHHHHHHHcC--------CC-----ch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHh
Q 045902 975 SPNVTIYESLLYSAWLR--------LP-----KD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELV 1038 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l~--------~~-----~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~ 1038 (1472)
|+++||.||+..++..+ .+ .+ +...++++.+||.+.+|...+ +||+||||||.|||||+
T Consensus 91 F~~lTVlENv~va~~~~~~~~~~l~~~~~~~~e~~~~e~A~~~Le~vgL~~~a~~~A~-----~LsyG~qR~LEIArALa 165 (250)
T COG0411 91 FPGLTVLENVAVGAHARLGLSGLLGRPRARKEEREARERARELLEFVGLGELADRPAG-----NLSYGQQRRLEIARALA 165 (250)
T ss_pred cCCCcHHHHHHHHhhhhhhhhhhhccccchhhHHHHHHHHHHHHHHcCCchhhcchhh-----cCChhHhHHHHHHHHHh
Confidence 99999999998764422 11 11 345678888899998888765 69999999999999999
Q ss_pred hCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1039 ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1039 ~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
.+|++|+||||.+||.+.....+.+.|+++.++ |.||+++-|+++. ++.+|||+++|+. |+++..|++.
T Consensus 166 ~~P~lLLLDEPaAGln~~e~~~l~~~i~~i~~~~g~tillIEHdM~~-Vm~l~dri~Vl~~-G~~IAeG~P~ 235 (250)
T COG0411 166 TQPKLLLLDEPAAGLNPEETEELAELIRELRDRGGVTILLIEHDMKL-VMGLADRIVVLNY-GEVIAEGTPE 235 (250)
T ss_pred cCCCEEEecCccCCCCHHHHHHHHHHHHHHHhcCCcEEEEEEeccHH-HhhhccEEEeccC-CcCcccCCHH
Confidence 999999999999999999999999999999874 7999999999985 8999999999985 7999999874
No 139
>PRK13536 nodulation factor exporter subunit NodI; Provisional
Probab=100.00 E-value=1.6e-35 Score=349.86 Aligned_cols=206 Identities=28% Similarity=0.409 Sum_probs=176.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 263 (1472)
+.+|+|+|++|++|++++|+||||||||||+++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 54 ~~~l~~is~~i~~Gei~gLlGpNGaGKSTLl~~L~Gl~~p~---~G~i~i~G~~~~~~~~~~~~~ig~v~q~~~~~~~~t 130 (340)
T PRK13536 54 KAVVNGLSFTVASGECFGLLGPNGAGKSTIARMILGMTSPD---AGKITVLGVPVPARARLARARIGVVPQFDNLDLEFT 130 (340)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---ceEEEECCEECCcchHHHhccEEEEeCCccCCCCCc
Confidence 46999999999999999999999999999999999999998 899999999876432 2467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.|.+...+... .+ . ....+.+++.+||++..++.+++
T Consensus 131 v~e~l~~~~~~~~~~~----------~~----------~--------------~~~~~~ll~~~~L~~~~~~~~~~---- 172 (340)
T PRK13536 131 VRENLLVFGRYFGMST----------RE----------I--------------EAVIPSLLEFARLESKADARVSD---- 172 (340)
T ss_pred HHHHHHHHHHHcCCCH----------HH----------H--------------HHHHHHHHHHcCCchhhCCChhh----
Confidence 9999987554332100 00 0 00134578889999888888765
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ .|.|++++.|+. .++.++||+|++|++|+
T Consensus 173 -LS~G~kqrv~lA~aL~~~P~lLiLDEPt~gLD~~~r~~l~~~l~~l~~-~g~tilisSH~l-~e~~~~~d~i~il~~G~ 249 (340)
T PRK13536 173 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTTHFM-EEAERLCDRLCVLEAGR 249 (340)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEECCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999976 588988887664 58889999999999999
Q ss_pred EEEecChhHHHH
Q 045902 424 IVYQGPREYVLD 435 (1472)
Q Consensus 424 iv~~G~~~~~~~ 435 (1472)
++++|+.+++..
T Consensus 250 i~~~g~~~~l~~ 261 (340)
T PRK13536 250 KIAEGRPHALID 261 (340)
T ss_pred EEEEcCHHHHHh
Confidence 999999998864
No 140
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=1.2e-35 Score=332.49 Aligned_cols=188 Identities=31% Similarity=0.430 Sum_probs=160.3
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh------c-ccceeEEeccCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE------T-FARISGYCEQNDIHS 975 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~------~-~~~~~gyv~Q~~~~~ 975 (1472)
+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.... . .++.++|++|++.++
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDR--PTSGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNLL 94 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcC--CCceeEEECCEehhhcchhHHHHHHhhcEEEEeeccccC
Confidence 569999999999999999999999999999999999876 4589999999875421 1 245789999999999
Q ss_pred CCCCHHHHHHHHHHcCCC-c---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 045902 976 PNVTIYESLLYSAWLRLP-K---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1051 (1472)
Q Consensus 976 ~~lTv~e~l~~~~~l~~~-~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTs 1051 (1472)
+.+||+|++.+....+.. . ...++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+
T Consensus 95 ~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~lllLDEP~~ 169 (218)
T cd03255 95 PDLTALENVELPLLLAGVPKKERRERAEELLERVGLGDRLNHYP-----SELSGGQQQRVAIARALANDPKIILADEPTG 169 (218)
T ss_pred CCCcHHHHHHHHHhhcCCCHHHHHHHHHHHHHHcCCchhhhcCh-----hhcCHHHHHHHHHHHHHccCCCEEEEcCCcc
Confidence 999999999987654321 1 235677888888876665543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1052 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
|||+.++..+.+.|+++++ .|+|||++||+++. + +.+|++++|++|
T Consensus 170 ~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~~-~-~~~d~v~~l~~G 216 (218)
T cd03255 170 NLDSETGKEVMELLRELNKEAGTTIVVVTHDPEL-A-EYADRIIELRDG 216 (218)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHHH-H-hhhcEEEEeeCC
Confidence 9999999999999999987 58999999999763 4 489999999863
No 141
>PRK11000 maltose/maltodextrin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-35 Score=353.57 Aligned_cols=206 Identities=25% Similarity=0.372 Sum_probs=176.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++....+ ++.++||+|+..+++.+||
T Consensus 16 ~~vl~~vsl~i~~Ge~~~l~G~nGsGKSTLL~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~i~~v~Q~~~l~~~~tv 92 (369)
T PRK11000 16 VVISKDINLDIHEGEFVVFVGPSGCGKSTLLRMIAGLEDIT---SGDLFIGEKRMNDVPPAERGVGMVFQSYALYPHLSV 92 (369)
T ss_pred eEEEeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---ceEEEECCEECCCCCHhHCCEEEEeCCcccCCCCCH
Confidence 35899999999999999999999999999999999999987 8999999999875443 3679999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.|..+..+.. +.+ . ...++.+++.+||++..|+.+++
T Consensus 93 ~eni~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~lgL~~~~~~~~~~----- 133 (369)
T PRK11000 93 AENMSFGLKLAGAK----------KEE----------I--------------NQRVNQVAEVLQLAHLLDRKPKA----- 133 (369)
T ss_pred HHHHHhHHhhcCCC----------HHH----------H--------------HHHHHHHHHHcCChhhhcCChhh-----
Confidence 99999875432210 000 0 01235678999998888876654
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++.+..+.|+|++.|++ .++.+++|+|++|++|++
T Consensus 134 LSgGq~QRvaLAraL~~~P~lLLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tvI~vTHd~-~~~~~~~d~i~vl~~G~i 212 (369)
T PRK11000 134 LSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMRIEISRLHKRLGRTMIYVTHDQ-VEAMTLADKIVVLDAGRV 212 (369)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHhCCEEEEEeCCH-HHHHHhCCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999999876688988887765 478899999999999999
Q ss_pred EEecChhHHH
Q 045902 425 VYQGPREYVL 434 (1472)
Q Consensus 425 v~~G~~~~~~ 434 (1472)
+..|+++++.
T Consensus 213 ~~~g~~~~i~ 222 (369)
T PRK11000 213 AQVGKPLELY 222 (369)
T ss_pred EEEcCHHHHH
Confidence 9999998874
No 142
>COG0410 LivF ABC-type branched-chain amino acid transport systems, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.7e-36 Score=318.64 Aligned_cols=201 Identities=28% Similarity=0.422 Sum_probs=169.0
Q ss_pred cccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCCCCC
Q 045902 900 ENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQNDIHS 975 (1472)
Q Consensus 900 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~~~~ 975 (1472)
+++.++|+|||+++++||+++|+|||||||||||++|+|..++ .+|+|.++|.++.. +..++-++||||....|
T Consensus 13 YG~~~~L~gvsl~v~~Geiv~llG~NGaGKTTlLkti~Gl~~~--~~G~I~~~G~dit~~p~~~r~r~Gi~~VPegR~iF 90 (237)
T COG0410 13 YGKIQALRGVSLEVERGEIVALLGRNGAGKTTLLKTIMGLVRP--RSGRIIFDGEDITGLPPHERARLGIAYVPEGRRIF 90 (237)
T ss_pred ccceeEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCeeEEECCeecCCCCHHHHHhCCeEeCcccccch
Confidence 4567899999999999999999999999999999999998773 48999999998753 33456789999999999
Q ss_pred CCCCHHHHHHHHHHcCCCch--H-HHHHHHHHcc-cccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 045902 976 PNVTIYESLLYSAWLRLPKD--M-FVEEVMELVE-MKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1051 (1472)
Q Consensus 976 ~~lTv~e~l~~~~~l~~~~~--~-~~~~v~~~l~-l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTs 1051 (1472)
|.+||+|||..++..+.... . ..+++.+++= |...+++..| .|||||||-++|||||+++|++|+|||||.
T Consensus 91 ~~LTVeENL~~g~~~~~~~~~~~~~~e~v~~lFP~Lker~~~~aG-----~LSGGEQQMLAiaRALm~~PklLLLDEPs~ 165 (237)
T COG0410 91 PRLTVEENLLLGAYARRDKEAQERDLEEVYELFPRLKERRNQRAG-----TLSGGEQQMLAIARALMSRPKLLLLDEPSE 165 (237)
T ss_pred hhCcHHHHHhhhhhcccccccccccHHHHHHHChhHHHHhcCccc-----CCChHHHHHHHHHHHHhcCCCEEEecCCcc
Confidence 99999999998766543211 1 2556666553 3333444433 699999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1052 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
||-|.-.+.|.+.|+++.++ |.||+++-+... ...+.+||.++|.+ |++++.|+..
T Consensus 166 GLaP~iv~~I~~~i~~l~~~~g~tIlLVEQn~~-~Al~iaDr~yvle~-Griv~~G~~~ 222 (237)
T COG0410 166 GLAPKIVEEIFEAIKELRKEGGMTILLVEQNAR-FALEIADRGYVLEN-GRIVLSGTAA 222 (237)
T ss_pred CcCHHHHHHHHHHHHHHHHcCCcEEEEEeccHH-HHHHhhCEEEEEeC-CEEEEecCHH
Confidence 99999999999999999866 779999988765 47789999999985 8999999864
No 143
>cd03258 ABC_MetN_methionine_transporter MetN (also known as YusC) is an ABC-type transporter encoded by metN of the metNPQ operon in Bacillus subtilis that is involved in methionine transport. Other members of this system include the MetP permease and the MetQ substrate binding protein. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.9e-35 Score=331.61 Aligned_cols=205 Identities=29% Similarity=0.386 Sum_probs=173.0
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHHG 260 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~~ 260 (1472)
++|+|+|+++++||+++|+||||||||||+++|+|.++++ +|+|.++|+++....+ ++.++|++|++.+++
T Consensus 19 ~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (233)
T cd03258 19 TALKDVSLSVPKGEIFGIIGRSGAGKSTLIRCINGLERPT---SGSVLVDGTDLTLLSGKELRKARRRIGMIFQHFNLLS 95 (233)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEccCcccCC
Confidence 6999999999999999999999999999999999999987 8999999998765421 356999999999999
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
.+||+||+.+.....+.. ..+ . ...++.+++.+||++..++.+.
T Consensus 96 ~~t~~e~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~-- 139 (233)
T cd03258 96 SRTVFENVALPLEIAGVP----------KAE----------I--------------EERVLELLELVGLEDKADAYPA-- 139 (233)
T ss_pred CCcHHHHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHHCCChhhhhcChh--
Confidence 999999998754322110 000 0 0013457888999887776664
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
.|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++..++|+|++.|++ .++.+++|++++|+
T Consensus 140 ---~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~-~~~~~~~d~i~~l~ 215 (233)
T cd03258 140 ---QLSGGQKQRVGIARALANNPKVLLCDEATSALDPETTQSILALLRDINRELGLTIVLITHEM-EVVKRICDRVAVME 215 (233)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEecCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhCCEEEEEE
Confidence 49999999999999999999999999999999999999999999998775578998888775 46778999999999
Q ss_pred CCeEEEecChhHHH
Q 045902 421 EGEIVYQGPREYVL 434 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~ 434 (1472)
+|++++.|+.+++.
T Consensus 216 ~G~i~~~~~~~~~~ 229 (233)
T cd03258 216 KGEVVEEGTVEEVF 229 (233)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999987653
No 144
>COG3840 ThiQ ABC-type thiamine transport system, ATPase component [Coenzyme metabolism]
Probab=100.00 E-value=4.6e-36 Score=305.13 Aligned_cols=192 Identities=27% Similarity=0.357 Sum_probs=169.1
Q ss_pred cceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHHHHHHH
Q 045902 908 DVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIYESLLY 986 (1472)
Q Consensus 908 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~ 986 (1472)
..+++|.+||++||+||||||||||||+|+|...+ .+|+|.|||.+... ....|-+++++|+..+|.++||.+|+-+
T Consensus 17 ~fdl~v~~ge~vAi~GpSGaGKSTLLnLIAGF~~P--~~G~i~i~g~d~t~~~P~~RPVSmlFQEnNLFaHLtV~qNigL 94 (231)
T COG3840 17 RFDLTVPAGEIVAILGPSGAGKSTLLNLIAGFETP--ASGEILINGVDHTASPPAERPVSMLFQENNLFAHLTVAQNIGL 94 (231)
T ss_pred EEEEeecCCcEEEEECCCCccHHHHHHHHHhccCC--CCceEEEcCeecCcCCcccCChhhhhhccccchhhhhhhhhcc
Confidence 35678999999999999999999999999998874 58999999998654 3445678999999999999999999987
Q ss_pred HHH--cCCCc--hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHH
Q 045902 987 SAW--LRLPK--DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1062 (1472)
Q Consensus 987 ~~~--l~~~~--~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~ 1062 (1472)
+.. ++++. .+.++.+...+|+.++.+++. ..|||||||||++||+|+++-+||+||||+|.|||.-+.++.
T Consensus 95 Gl~P~LkL~a~~r~~v~~aa~~vGl~~~~~RLP-----~~LSGGqRQRvALARclvR~~PilLLDEPFsALdP~LR~eMl 169 (231)
T COG3840 95 GLSPGLKLNAEQREKVEAAAAQVGLAGFLKRLP-----GELSGGQRQRVALARCLVREQPILLLDEPFSALDPALRAEML 169 (231)
T ss_pred cCCcccccCHHHHHHHHHHHHHhChhhHhhhCc-----cccCchHHHHHHHHHHHhccCCeEEecCchhhcCHHHHHHHH
Confidence 643 33333 256888999999999888764 379999999999999999999999999999999999999999
Q ss_pred HHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1063 RTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1063 ~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
.++.+++++ +.|++++||+|+ +.....|+++++++ |+|.+.|+.
T Consensus 170 ~Lv~~l~~E~~~TllmVTH~~~-Da~~ia~~~~fl~~-Gri~~~g~~ 214 (231)
T COG3840 170 ALVSQLCDERKMTLLMVTHHPE-DAARIADRVVFLDN-GRIAAQGST 214 (231)
T ss_pred HHHHHHHHhhCCEEEEEeCCHH-HHHHhhhceEEEeC-CEEEeeccH
Confidence 999999754 899999999997 78899999999986 899999985
No 145
>cd03293 ABC_NrtD_SsuB_transporters NrtD and SsuB are the ATP-binding subunits of the bacterial ABC-type nitrate and sulfonate transport systems, respectively. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.4e-35 Score=328.22 Aligned_cols=200 Identities=27% Similarity=0.354 Sum_probs=169.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVR 265 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 265 (1472)
+.+|+|+|+.+++|++++|+||||||||||+++|+|.++++ +|+|.++|+++.. .++.++|++|++.+++.+||+
T Consensus 17 ~~il~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~tv~ 91 (220)
T cd03293 17 VTALEDISLSVEEGEFVALVGPSGCGKSTLLRIIAGLERPT---SGEVLVDGEPVTG--PGPDRGYVFQQDALLPWLTVL 91 (220)
T ss_pred eEEEeceeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcc--ccCcEEEEecccccccCCCHH
Confidence 46999999999999999999999999999999999999887 8999999998764 246799999999999999999
Q ss_pred HHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCC
Q 045902 266 ETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGI 345 (1472)
Q Consensus 266 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 345 (1472)
||+.+.....+.. ..+ . ...++.+++.+||++..++.++ .|
T Consensus 92 e~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~-----~L 132 (220)
T cd03293 92 DNVALGLELQGVP----------KAE----------A--------------RERAEELLELVGLSGFENAYPH-----QL 132 (220)
T ss_pred HHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHHcCChhhhhCCcc-----cC
Confidence 9998764322110 000 0 0013557888999877776665 49
Q ss_pred ChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec--CCe
Q 045902 346 SGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS--EGE 423 (1472)
Q Consensus 346 SGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~--~G~ 423 (1472)
|||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++.+..++|+|++.|++. ++.+++|++++|+ +|+
T Consensus 133 SgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~~~G~ 211 (220)
T cd03293 133 SGGMRQRVALARALAVDPDVLLLDEPFSALDALTREQLQEELLDIWRETGKTVLLVTHDID-EAVFLADRVVVLSARPGR 211 (220)
T ss_pred CHHHHHHHHHHHHHHcCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEECCCCE
Confidence 9999999999999999999999999999999999999999999987656789888887764 6778999999999 799
Q ss_pred EEEecCh
Q 045902 424 IVYQGPR 430 (1472)
Q Consensus 424 iv~~G~~ 430 (1472)
++..++.
T Consensus 212 i~~~~~~ 218 (220)
T cd03293 212 IVAEVEV 218 (220)
T ss_pred EEEEEEe
Confidence 9998875
No 146
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=2.4e-35 Score=330.42 Aligned_cols=196 Identities=28% Similarity=0.450 Sum_probs=167.0
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCCH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~tv 92 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELR--PTSGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELTV 92 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEecccchHHHhhhEEEecCcCCccccCCH
Confidence 569999999999999999999999999999999999876 458999999987642 2345679999999998889999
Q ss_pred HHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHH
Q 045902 981 YESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1056 (1472)
Q Consensus 981 ~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~ 1056 (1472)
+||+.+....+. +.. ..++++++.+++.+..++.. ..||+|||||++||++|+.+|++|+|||||+|||+.
T Consensus 93 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~ 167 (220)
T cd03263 93 REHLRFYARLKGLPKSEIKEEVELLLRVLGLTDKANKRA-----RTLSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPA 167 (220)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHHhChh-----hhCCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHH
Confidence 999987654332 221 34567788888876655543 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1057 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1057 ~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |+++..|+.
T Consensus 168 ~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 216 (220)
T cd03263 168 SRRAIWDLILEVRK-GRSIILTTHSMD-EAEALCDRIAIMSD-GKLRCIGSP 216 (220)
T ss_pred HHHHHHHHHHHHhc-CCEEEEEcCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999976 599999999986 46678999999985 788888864
No 147
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.9e-35 Score=331.70 Aligned_cols=197 Identities=29% Similarity=0.441 Sum_probs=164.6
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hc-ccceeEEeccCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ET-FARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~-~~~~~gyv~Q~~~~~~~l 978 (1472)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... .. .++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLP--PRSGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPEL 90 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCCCCHHHHHhcCeEEeccccccCCCC
Confidence 469999999999999999999999999999999999876 458999999987532 11 245689999999999999
Q ss_pred CHHHHHHHHHHcCCCc--hHHHHHHHHHc-ccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCH
Q 045902 979 TIYESLLYSAWLRLPK--DMFVEEVMELV-EMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDA 1055 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~~~--~~~~~~v~~~l-~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~ 1055 (1472)
|++||+.+........ ...++++++.+ ++.+..++. +..||||||||++|||+|+.+|++|+|||||+|||+
T Consensus 91 t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~ 165 (222)
T cd03224 91 TVEENLLLGAYARRRAKRKARLERVYELFPRLKERRKQL-----AGTLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAP 165 (222)
T ss_pred cHHHHHHHHhhhcCchhHHHHHHHHHHHHHhhhhhhhCc-----hhhCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCH
Confidence 9999998865433211 12345666666 354444443 347999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1056 RAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1056 ~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
.++..+++.|++++++|+|||+++|+++ ++.+.+|++++|++ |+++..|+.
T Consensus 166 ~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (222)
T cd03224 166 KIVEEIFEAIRELRDEGVTILLVEQNAR-FALEIADRAYVLER-GRVVLEGTA 216 (222)
T ss_pred HHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhccEEEEeeC-CeEEEeCCH
Confidence 9999999999999877899999999976 46788999999985 788888864
No 148
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=3e-35 Score=333.99 Aligned_cols=197 Identities=22% Similarity=0.382 Sum_probs=167.5
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeEEeccCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-----ETFARISGYCEQNDIHSPN 977 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-----~~~~~~~gyv~Q~~~~~~~ 977 (1472)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEE--ITSGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFPH 91 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECCcCChhHHHHhhceEEEecccccCCC
Confidence 569999999999999999999999999999999999876 458999999987642 2345678999999988899
Q ss_pred CCHHHHHHHHHH-cC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 978 VTIYESLLYSAW-LR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 978 lTv~e~l~~~~~-l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
+||.|++.+... .+ ...+ ..++++++.+++.+..+... ..||||||||++||++|+.+|++|+|||||+|
T Consensus 92 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~ 166 (240)
T PRK09493 92 LTALENVMFGPLRVRGASKEEAEKQARELLAKVGLAERAHHYP-----SELSGGQQQRVAIARALAVKPKLMLFDEPTSA 166 (240)
T ss_pred CcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCChHHHhcCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 999999987542 11 1111 34567888888876655543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 167 LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (240)
T PRK09493 167 LDPELRHEVLKVMQDLAEEGMTMVIVTHEIG-FAEKVASRLIFIDK-GRIAEDGDP 220 (240)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeCCH
Confidence 9999999999999999877999999999976 46678999999985 789988875
No 149
>KOG0058 consensus Peptide exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=3.7e-36 Score=363.94 Aligned_cols=214 Identities=28% Similarity=0.430 Sum_probs=179.9
Q ss_pred ceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCc
Q 045902 875 PLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGY 954 (1472)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~ 954 (1472)
...+.|+||++.++.. ++.++|+|+||+|+|||.+||+||||+||||+.++|...++ |.+|+|.+||+
T Consensus 463 ~G~IeF~~VsFaYP~R----------p~~~Vlk~lsfti~pGe~vALVGPSGsGKSTiasLL~rfY~--PtsG~IllDG~ 530 (716)
T KOG0058|consen 463 QGVIEFEDVSFAYPTR----------PDVPVLKNLSFTIRPGEVVALVGPSGSGKSTIASLLLRFYD--PTSGRILLDGV 530 (716)
T ss_pred cceEEEEEeeeecCCC----------CCchhhcCceeeeCCCCEEEEECCCCCCHHHHHHHHHHhcC--CCCCeEEECCe
Confidence 3478999999998753 34679999999999999999999999999999999999887 45999999999
Q ss_pred cCCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcc-------cccccccccCCCCCCCCC
Q 045902 955 PKKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVE-------MKALRNSLVGLPGVDGLS 1024 (1472)
Q Consensus 955 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~-------l~~~~~~~~~~~~~~~LS 1024 (1472)
|+.+ ..+++.+|+|.|+|.+|. -||+||+.|+.. ...++.++.+.+..+ +.+-.|+.+|..| ..||
T Consensus 531 ~i~~~~~~~lr~~Ig~V~QEPvLFs-~sI~eNI~YG~~--~~t~e~i~~AAk~ANah~FI~~~p~gY~T~VGEkG-~qLS 606 (716)
T KOG0058|consen 531 PISDINHKYLRRKIGLVGQEPVLFS-GSIRENIAYGLD--NATDEEIEAAAKMANAHEFITNFPDGYNTVVGEKG-SQLS 606 (716)
T ss_pred ehhhcCHHHHHHHeeeeeccceeec-ccHHHHHhcCCC--CCCHHHHHHHHHHhChHHHHHhCccccccccCCcc-cccc
Confidence 9754 557789999999999986 599999999764 223333433333322 2333577777665 4799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1025 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1025 gGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
||||||++|||||++||.||||||.||+||+++...|.+.|.++.+ ++|||++.|+.+ ..+.+|+|+++++ |+++.
T Consensus 607 GGQKQRIAIARALlr~P~VLILDEATSALDaeSE~lVq~aL~~~~~-~rTVlvIAHRLS--TV~~Ad~Ivvi~~-G~V~E 682 (716)
T KOG0058|consen 607 GGQKQRIAIARALLRNPRVLILDEATSALDAESEYLVQEALDRLMQ-GRTVLVIAHRLS--TVRHADQIVVIDK-GRVVE 682 (716)
T ss_pred chHHHHHHHHHHHhcCCCEEEEechhhhcchhhHHHHHHHHHHhhc-CCeEEEEehhhh--HhhhccEEEEEcC-CeEEe
Confidence 9999999999999999999999999999999999999999998865 599999999865 7889999999985 79999
Q ss_pred EcCC
Q 045902 1105 AGPL 1108 (1472)
Q Consensus 1105 ~g~~ 1108 (1472)
.|.-
T Consensus 683 ~G~h 686 (716)
T KOG0058|consen 683 MGTH 686 (716)
T ss_pred cccH
Confidence 9964
No 150
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.1e-35 Score=340.33 Aligned_cols=201 Identities=23% Similarity=0.317 Sum_probs=169.6
Q ss_pred ccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hc----ccceeEEeccC
Q 045902 899 EENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ET----FARISGYCEQN 971 (1472)
Q Consensus 899 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~----~~~~~gyv~Q~ 971 (1472)
.++++.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.+... .. .++.++|++|+
T Consensus 33 ~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p--~~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~ 110 (269)
T cd03294 33 KTGQTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEP--TSGKVLIDGQDIAAMSRKELRELRRKKISMVFQS 110 (269)
T ss_pred hcCCceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCeEEEECCEEccccChhhhhhhhcCcEEEEecC
Confidence 34567899999999999999999999999999999999998763 58999999987532 11 13568999999
Q ss_pred CCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCcccc
Q 045902 972 DIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMD 1047 (1472)
Q Consensus 972 ~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LD 1047 (1472)
+.+++.+||.||+.+...... ... ..++++++.+++.+..++.+ ..||||||||++||+||+.+|++|+||
T Consensus 111 ~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~qrv~lAral~~~p~illLD 185 (269)
T cd03294 111 FALLPHRTVLENVAFGLEVQGVPRAEREERAAEALELVGLEGWEHKYP-----DELSGGMQQRVGLARALAVDPDILLMD 185 (269)
T ss_pred cccCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEc
Confidence 999999999999988654321 111 34567788888876666554 479999999999999999999999999
Q ss_pred CCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1048 EPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1048 EPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 186 EPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 245 (269)
T cd03294 186 EAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIAIMKD-GRLVQVGTP 245 (269)
T ss_pred CCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999754 899999999976 46788999999985 788888875
No 151
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=2.5e-35 Score=328.84 Aligned_cols=189 Identities=27% Similarity=0.385 Sum_probs=160.4
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQNDIHSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~~~~~ 976 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALT--PSRGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLLP 92 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcccCCHHHHHHHHhheEEEecChhhcc
Confidence 469999999999999999999999999999999999876 358999999987642 124567899999999889
Q ss_pred CCCHHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 977 NVTIYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
.+|+.|++.+....+. .. +..++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~lllLDEPt~~ 167 (214)
T TIGR02673 93 DRTVYENVALPLEVRGKKEREIQRRVGAALRQVGLEHKADAFP-----EQLSGGEQQRVAIARAIVNSPPLLLADEPTGN 167 (214)
T ss_pred CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCccc
Confidence 9999999988654321 11 134567777777766555443 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
||+.++..+.+.|+++.++|+|||++||+++ ++.+.||++++|++|
T Consensus 168 LD~~~~~~l~~~l~~~~~~~~tii~~tH~~~-~~~~~~d~i~~l~~G 213 (214)
T TIGR02673 168 LDPDLSERILDLLKRLNKRGTTVIVATHDLS-LVDRVAHRVIILDDG 213 (214)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEecCC
Confidence 9999999999999999877999999999976 567789999999863
No 152
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.4e-35 Score=350.07 Aligned_cols=206 Identities=28% Similarity=0.434 Sum_probs=172.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 263 (1472)
++++|+|++++||+.++|+|+||||||||+++|+|+++++ +|+|++||++..+..+ +++++||+|++.+++ -|
T Consensus 335 ~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~~---~G~I~vng~~l~~l~~~~~~k~i~~v~Q~p~lf~-gT 410 (559)
T COG4988 335 PALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAPT---QGEIRVNGIDLRDLSPEAWRKQISWVSQNPYLFA-GT 410 (559)
T ss_pred cccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCCC---CceEEECCccccccCHHHHHhHeeeeCCCCcccc-cc
Confidence 6899999999999999999999999999999999999987 9999999999988764 588999999998886 49
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
+|||+.++.... .++++.+..+.+. +.+.+.-+...||.+| +.++
T Consensus 411 ireNi~l~~~~~----------------------s~e~i~~al~~a~------------l~~~v~~p~GLdt~ig-e~G~ 455 (559)
T COG4988 411 IRENILLARPDA----------------------SDEEIIAALDQAG------------LLEFVPKPDGLDTVIG-EGGA 455 (559)
T ss_pred HHHHhhccCCcC----------------------CHHHHHHHHHHhc------------HHHhhcCCCcccchhc-cCCC
Confidence 999998863210 0112222222111 1222222456799998 6889
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
+|||||+|||++|||++.+++++++||||++||.+|+..|.+.|.++++ ++|+++..|++ +...-+|+|++|++|+
T Consensus 456 ~LSgGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~--~ktvl~itHrl--~~~~~~D~I~vld~G~ 531 (559)
T COG4988 456 GLSGGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK--QKTVLVITHRL--EDAADADRIVVLDNGR 531 (559)
T ss_pred CCCHHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh--CCeEEEEEcCh--HHHhcCCEEEEecCCc
Confidence 9999999999999999999999999999999999999999999999986 48888888865 4567899999999999
Q ss_pred EEEecChhHHHH
Q 045902 424 IVYQGPREYVLD 435 (1472)
Q Consensus 424 iv~~G~~~~~~~ 435 (1472)
++++|.++++.+
T Consensus 532 l~~~g~~~~L~~ 543 (559)
T COG4988 532 LVEQGTHEELSE 543 (559)
T ss_pred eeccCCHHHHhh
Confidence 999999998853
No 153
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=4.1e-35 Score=342.95 Aligned_cols=229 Identities=25% Similarity=0.378 Sum_probs=188.2
Q ss_pred cCCCCCcceEEEeeeEEEEEEecCCCcCCChhHhHHHHHHhhhhhcccccCCcccceeeeceeeEEeCCeEEEEEcCCCC
Q 045902 131 VGIEIPKIEVRFENLSIEGDAYVGTRALPTLLNTSLNAIEGVLGFLRLFPSKKRKLEILHDVSGIVKPSRMTLLLGPPGS 210 (1472)
Q Consensus 131 ~~~~~p~~~v~f~~L~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~ilGp~Gs 210 (1472)
..+..|.-.++|+|++.+-. .+++||+++||+|++||.+||+|+|||
T Consensus 343 ~~i~~~~~~I~F~dV~f~y~---------------------------------~k~~iL~gvsf~I~kGekVaIvG~nGs 389 (591)
T KOG0057|consen 343 LPIELFGGSIEFDDVHFSYG---------------------------------PKRKVLKGVSFTIPKGEKVAIVGSNGS 389 (591)
T ss_pred CCcccCCCcEEEEeeEEEeC---------------------------------CCCceecceeEEecCCCEEEEECCCCC
Confidence 46677778899999986631 234599999999999999999999999
Q ss_pred cHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCCCHHHHHHHhhhccCCCchhHHHHHh
Q 045902 211 GKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRFELLAEL 287 (1472)
Q Consensus 211 GKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~ 287 (1472)
||||+|++|.++.+ + +|+|.+||+++++..+ ++.+|||||+..+|.+ ||.+||.|+..-. ..+...+.
T Consensus 390 GKSTilr~LlrF~d-~---sG~I~IdG~dik~~~~~SlR~~Ig~VPQd~~LFnd-TIl~NI~YGn~sa----s~eeV~e~ 460 (591)
T KOG0057|consen 390 GKSTILRLLLRFFD-Y---SGSILIDGQDIKEVSLESLRQSIGVVPQDSVLFND-TILYNIKYGNPSA----SDEEVVEA 460 (591)
T ss_pred CHHHHHHHHHHHhc-c---CCcEEECCeeHhhhChHHhhhheeEeCCcccccch-hHHHHhhcCCCCc----CHHHHHHH
Confidence 99999999999998 5 8999999999988765 5789999998888855 9999999873211 11111122
Q ss_pred hHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHHHHHHHHHHHHhCCCcEeE
Q 045902 288 SRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALF 367 (1472)
Q Consensus 288 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~ill 367 (1472)
|++ ++ + .|. ...|++..+|.|| +.+.-|||||||||++|||++.+|+|++
T Consensus 461 ~k~---a~---------------~--------hd~---i~~l~~GY~T~VG-erG~~LSGGekQrvslaRa~lKda~Il~ 510 (591)
T KOG0057|consen 461 CKR---AG---------------L--------HDV---ISRLPDGYQTLVG-ERGLMLSGGEKQRVSLARAFLKDAPILL 510 (591)
T ss_pred HHH---cC---------------c--------HHH---HHhccccchhhHh-hcccccccchHHHHHHHHHHhcCCCeEE
Confidence 211 11 1 122 3457788999999 5666799999999999999999999999
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEecChhHHHH
Q 045902 368 MDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQGPREYVLD 435 (1472)
Q Consensus 368 LDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G~~~~~~~ 435 (1472)
+|||||.||+.|..++++.+... ..++|+|+..|.. .+..-||+|++|++|++...|++++++.
T Consensus 511 ~DEaTS~LD~~TE~~i~~~i~~~--~~~rTvI~IvH~l--~ll~~~DkI~~l~nG~v~e~gth~ell~ 574 (591)
T KOG0057|consen 511 LDEATSALDSETEREILDMIMDV--MSGRTVIMIVHRL--DLLKDFDKIIVLDNGTVKEYGTHSELLA 574 (591)
T ss_pred ecCcccccchhhHHHHHHHHHHh--cCCCeEEEEEecc--hhHhcCCEEEEEECCeeEEeccHHHHhh
Confidence 99999999999999999999984 3689999988754 5778999999999999999999999875
No 154
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.8e-35 Score=337.98 Aligned_cols=218 Identities=27% Similarity=0.395 Sum_probs=176.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-----CCceEEEEcCCCC-CC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-----PQRTCAYISQHDL-HH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 259 (1472)
+.+|+|||++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++||+|++. .+
T Consensus 20 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 96 (287)
T PRK13637 20 KKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLKPT---SGKIIIDGVDITDKKVKLSDIRKKVGLVFQYPEYQL 96 (287)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ccEEEECCEECCCcCccHHHHhhceEEEecCchhcc
Confidence 46999999999999999999999999999999999999987 999999999986532 1357999999863 34
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc--ccccccc
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD--ICADIMV 337 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~--~~~dt~v 337 (1472)
..+||+||+.|.....+.. +.+ . ...++++++.+||+ +..|+.+
T Consensus 97 ~~~tv~e~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~gL~~~~~~~~~~ 142 (287)
T PRK13637 97 FEETIEKDIAFGPINLGLS----------EEE----------I--------------ENRVKRAMNIVGLDYEDYKDKSP 142 (287)
T ss_pred ccccHHHHHHhHHHHCCCC----------HHH----------H--------------HHHHHHHHHHcCCCchhhccCCc
Confidence 4689999998864322110 000 0 01235678899997 5566555
Q ss_pred cCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEE
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDII 417 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ii 417 (1472)
+.|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++.|+. .++.+++|+|+
T Consensus 143 -----~~LSgGq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~-~~~~~~~drv~ 216 (287)
T PRK13637 143 -----FELSGGQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSM-EDVAKLADRII 216 (287)
T ss_pred -----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEE
Confidence 459999999999999999999999999999999999999999999999875688988888764 47778999999
Q ss_pred EecCCeEEEecChhHHHH---HHHhcCCCCCC
Q 045902 418 LLSEGEIVYQGPREYVLD---FFESVGFRCPE 446 (1472)
Q Consensus 418 lL~~G~iv~~G~~~~~~~---~F~~~G~~cp~ 446 (1472)
+|++|+++++|+.+++.+ .+...|+.+|.
T Consensus 217 ~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 248 (287)
T PRK13637 217 VMNKGKCELQGTPREVFKEVETLESIGLAVPQ 248 (287)
T ss_pred EEECCEEEEECCHHHHHhCHHHHHHcCCCCCh
Confidence 999999999999988743 23345655544
No 155
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=3.5e-35 Score=335.59 Aligned_cols=209 Identities=26% Similarity=0.389 Sum_probs=173.1
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+ +++.+|+|+||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (250)
T PRK11264 4 IEVKNLVKKF-------------HGQTVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQ--PEAGTIRVGDITID 68 (250)
T ss_pred EEEeceEEEE-------------CCeeeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEcc
Confidence 5567776554 23469999999999999999999999999999999999876 35899999998753
Q ss_pred h-----------hcccceeEEeccCCCCCCCCCHHHHHHHHHH-cCC-Cch---HHHHHHHHHcccccccccccCCCCCC
Q 045902 958 Q-----------ETFARISGYCEQNDIHSPNVTIYESLLYSAW-LRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVD 1021 (1472)
Q Consensus 958 ~-----------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~-l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~ 1021 (1472)
. ...++.++|++|++.+++..|+.||+.+... .+. ..+ ..++++++.+++.+..+.. +.
T Consensus 69 ~~~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~ 143 (250)
T PRK11264 69 TARSLSQQKGLIRQLRQHVGFVFQNFNLFPHRTVLENIIEGPVIVKGEPKEEATARARELLAKVGLAGKETSY-----PR 143 (250)
T ss_pred ccccccchhhHHHHhhhhEEEEecCcccCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhCC-----hh
Confidence 2 1235678999999998999999999987533 121 111 3456778888887655543 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 045902 1022 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGH 1101 (1472)
Q Consensus 1022 ~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~ 1101 (1472)
.||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 144 ~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~~tH~~~-~~~~~~d~i~~l~~-G~ 221 (250)
T PRK11264 144 RLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQEKRTMVIVTHEMS-FARDVADRAIFMDQ-GR 221 (250)
T ss_pred hCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999877999999999976 46678999999985 78
Q ss_pred EEEEcCC
Q 045902 1102 VIYAGPL 1108 (1472)
Q Consensus 1102 v~~~g~~ 1108 (1472)
+++.|+.
T Consensus 222 i~~~~~~ 228 (250)
T PRK11264 222 IVEQGPA 228 (250)
T ss_pred EEEeCCH
Confidence 8888874
No 156
>cd03259 ABC_Carb_Solutes_like ABC Carbohydrate and Solute Transporters-like subgroup. This family is comprised of proteins involved in the transport of apparently unrelated solutes and proteins specific for di- and oligosaccharides and polyols. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.3e-35 Score=327.62 Aligned_cols=200 Identities=29% Similarity=0.428 Sum_probs=167.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 89 (213)
T cd03259 13 VRALDDLSLTVEPGEFLALLGPSGCGKTTLLRLIAGLERPD---SGEILIDGRDVTGVPPERRNIGMVFQDYALFPHLTV 89 (213)
T ss_pred eeeecceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcCcCchhhccEEEEcCchhhccCCcH
Confidence 46999999999999999999999999999999999999887 8999999998765332 3579999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.+.....+.. ..+ . ...++.+++.+||++..++.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~----- 130 (213)
T cd03259 90 AENIAFGLKLRGVP----------KAE----------I--------------RARVRELLELVGLEGLLNRYPHE----- 130 (213)
T ss_pred HHHHHhHHHHcCCC----------HHH----------H--------------HHHHHHHHHHcCChhhhhcChhh-----
Confidence 99998754321100 000 0 00134578889998877776654
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|++
T Consensus 131 LSgG~~qrl~la~al~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~~G~i 209 (213)
T cd03259 131 LSGGQQQRVALARALAREPSLLLLDEPLSALDAKLREELREELKELQRELGITTIYVTHDQ-EEALALADRIAVMNEGRI 209 (213)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCH-HHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998765578888887765 467789999999999999
Q ss_pred EEec
Q 045902 425 VYQG 428 (1472)
Q Consensus 425 v~~G 428 (1472)
++.|
T Consensus 210 ~~~g 213 (213)
T cd03259 210 VQVG 213 (213)
T ss_pred EecC
Confidence 8765
No 157
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.5e-35 Score=337.13 Aligned_cols=198 Identities=26% Similarity=0.338 Sum_probs=165.6
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQNDIHSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~~~~~ 976 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 92 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVE--PSSGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLIE 92 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCcccc
Confidence 469999999999999999999999999999999999876 358999999987532 124567999999999999
Q ss_pred CCCHHHHHHHHHHc---------CCC-c--hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 045902 977 NVTIYESLLYSAWL---------RLP-K--DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSII 1044 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l---------~~~-~--~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il 1044 (1472)
.+||+||+.+.... ... . ...++++++.+++.+..+.. +..||||||||++||++|+.+|++|
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~ll 167 (243)
T TIGR02315 93 RLTVLENVLHGRLGYKPTWRSLLGRFSEEDKERALSALERVGLADKAYQR-----ADQLSGGQQQRVAIARALAQQPDLI 167 (243)
T ss_pred cccHHHHHhhcccccccchhhhhccccHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcCCCEE
Confidence 99999999764210 011 1 23456778888887665554 3479999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1045 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1045 ~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||++++|.+ |+++..|+..
T Consensus 168 llDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l~~-G~i~~~~~~~ 231 (243)
T TIGR02315 168 LADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGLKA-GEIVFDGAPS 231 (243)
T ss_pred EEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEEC-CEEEecCCHH
Confidence 999999999999999999999999764 899999999976 46678999999985 7888888753
No 158
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-35 Score=329.90 Aligned_cols=213 Identities=25% Similarity=0.344 Sum_probs=172.9
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+... ...+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~~~---------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 73 (233)
T PRK11629 5 LLQCDNLCKRYQEG---------SVQTDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDT--PTSGDVIFNGQPM 73 (233)
T ss_pred eEEEEeEEEEcCCC---------CcceeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEc
Confidence 36777877665210 011469999999999999999999999999999999999876 4589999999876
Q ss_pred Chh------cc-cceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 957 KQE------TF-ARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 957 ~~~------~~-~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
... .. ++.++|++|++.+++.+|++||+.+....+. ..+ ..++++++.+++.+..++.. ..|||
T Consensus 74 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSg 148 (233)
T PRK11629 74 SKLSSAAKAELRNQKLGFIYQFHHLLPDFTALENVAMPLLIGKKKPAEINSRALEMLAAVGLEHRANHRP-----SELSG 148 (233)
T ss_pred CcCCHHHHHHHHhccEEEEecCcccCCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhhCCh-----hhCCH
Confidence 421 12 2568999999988999999999988654321 211 34667888888876655543 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ +|+|||++||+++ ..+.+|++++|.+ |+++.
T Consensus 149 G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~--~~~~~~~~~~l~~-G~i~~ 225 (233)
T PRK11629 149 GERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ--LAKRMSRQLEMRD-GRLTA 225 (233)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhhCEEEEEEC-CEEEE
Confidence 999999999999999999999999999999999999999999975 5899999999975 3455689999975 78988
Q ss_pred EcCC
Q 045902 1105 AGPL 1108 (1472)
Q Consensus 1105 ~g~~ 1108 (1472)
.+++
T Consensus 226 ~~~~ 229 (233)
T PRK11629 226 ELSL 229 (233)
T ss_pred Eecc
Confidence 8875
No 159
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=5e-35 Score=329.11 Aligned_cols=198 Identities=39% Similarity=0.706 Sum_probs=167.1
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC-CeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-GYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.+......++.++|++|++.+++.+||+
T Consensus 20 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 99 (226)
T cd03234 20 ARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTTSGQILFNGQPRKPDQFQKCVAYVRQDDILLPGLTVR 99 (226)
T ss_pred cccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCCceEEEECCEECChHHhcccEEEeCCCCccCcCCcHH
Confidence 5799999999999999999999999999999999998651 135899999998875545667899999999999999999
Q ss_pred HHHHHHHHcCCC----ch---HHHHH-HHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 982 ESLLYSAWLRLP----KD---MFVEE-VMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 982 e~l~~~~~l~~~----~~---~~~~~-v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
||+.+......+ .. ...++ .++.+++.++.++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 100 enl~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrl~laral~~~p~illlDEP~~gL 174 (226)
T cd03234 100 ETLTYTAILRLPRKSSDAIRKKRVEDVLLRDLALTRIGGNL-----VKGISGGERRRVSIAVQLLWDPKVLILDEPTSGL 174 (226)
T ss_pred HHHHHHHHhhcccccchHHHHHHHHHHHHHhhcchhhhccc-----ccCcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCC
Confidence 999986543321 11 12334 67777776665544 3479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1054 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
|+.++..+.+.|+++.++|.|||+++|++..++.+.+|++++|++ |++++.|
T Consensus 175 D~~~~~~~~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~i~~l~~-G~i~~~g 226 (226)
T cd03234 175 DSFTALNLVSTLSQLARRNRIVILTIHQPRSDLFRLFDRILLLSS-GEIVYSG 226 (226)
T ss_pred CHHHHHHHHHHHHHHHHCCCEEEEEecCCCHHHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999877899999999985468899999999985 7887754
No 160
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=3.5e-35 Score=335.27 Aligned_cols=206 Identities=21% Similarity=0.259 Sum_probs=173.4
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 12 ~l~i~~l~~~~~-------------~~~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~--p~~G~i~~~g~~~ 76 (257)
T PRK11247 12 PLLLNAVSKRYG-------------ERTVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLET--PSAGELLAGTAPL 76 (257)
T ss_pred cEEEEEEEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEH
Confidence 477888876652 3469999999999999999999999999999999999876 3589999999764
Q ss_pred ChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHH
Q 045902 957 KQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVE 1036 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~a 1036 (1472)
. ..++.++|++|++.+++.+||+||+.+... ...+..++++++.+++.+..+.. +..||||||||++||++
T Consensus 77 ~--~~~~~i~~v~q~~~l~~~~tv~enl~~~~~--~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGqkqrl~lara 147 (257)
T PRK11247 77 A--EAREDTRLMFQDARLLPWKKVIDNVGLGLK--GQWRDAALQALAAVGLADRANEW-----PAALSGGQKQRVALARA 147 (257)
T ss_pred H--HhhCceEEEecCccCCCCCcHHHHHHhccc--chHHHHHHHHHHHcCChhHhcCC-----hhhCCHHHHHHHHHHHH
Confidence 3 345678999999998888999999987421 11234567788888887665554 34799999999999999
Q ss_pred HhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1037 LVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1037 L~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 148 L~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~-G~i~~~~~~ 218 (257)
T PRK11247 148 LIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEE-GKIGLDLTV 218 (257)
T ss_pred HhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeeccc
Confidence 9999999999999999999999999999999865 4899999999976 46778999999985 788887764
No 161
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=3.4e-35 Score=333.96 Aligned_cols=197 Identities=26% Similarity=0.401 Sum_probs=167.1
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIE--PTSGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHMT 91 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCeEcCcCChHHhhcceEEEccCccccCCCc
Confidence 469999999999999999999999999999999999876 358999999987532 234567899999999999999
Q ss_pred HHHHHHHHHHcCC-Cch---HHHHHHHHHccccc--ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 980 IYESLLYSAWLRL-PKD---MFVEEVMELVEMKA--LRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 980 v~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~--~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
++||+.+....+. +.. ..++++++.+++.+ ..++. +..||||||||++||++|+.+|++|+|||||+||
T Consensus 92 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~L 166 (242)
T cd03295 92 VEENIALVPKLLKWPKEKIRERADELLALVGLDPAEFADRY-----PHELSGGQQQRVGVARALAADPPLLLMDEPFGAL 166 (242)
T ss_pred HHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcHHHHhcC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccC
Confidence 9999987654432 211 34567788888864 44443 3579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1054 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 167 D~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 220 (242)
T cd03295 167 DPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMKN-GEIVQVGTP 220 (242)
T ss_pred CHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999999999999765 899999999976 46788999999985 788888875
No 162
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=3.2e-35 Score=328.02 Aligned_cols=190 Identities=26% Similarity=0.382 Sum_probs=161.5
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQNDIHSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~~~~~ 976 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 91 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEEL--PTSGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLLP 91 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcccCCHHHHHHHHHheEEEecCchhcc
Confidence 469999999999999999999999999999999999876 458999999987532 124567999999999999
Q ss_pred CCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 977 NVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
.+|+.||+.+....+. ..+ ..++++++.+++.+..++.. ..||||||||++||++|+.+|++++|||||+|
T Consensus 92 ~~t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~ 166 (214)
T cd03292 92 DRNVYENVAFALEVTGVPPREIRKRVPAALELVGLSHKHRALP-----AELSGGEQQRVAIARAIVNSPTILIADEPTGN 166 (214)
T ss_pred CCcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCCCc
Confidence 9999999988654332 111 34567788888876655543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGH 1101 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~ 1101 (1472)
||+.++..+.+.|++++++|+|||++||+++ .+.+.+|++++|++ |+
T Consensus 167 LD~~~~~~~~~~l~~~~~~~~tiiivtH~~~-~~~~~~d~i~~l~~-G~ 213 (214)
T cd03292 167 LDPDTTWEIMNLLKKINKAGTTVVVATHAKE-LVDTTRHRVIALER-GK 213 (214)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999777999999999975 46668999999985 44
No 163
>PRK13637 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.1e-35 Score=340.74 Aligned_cols=214 Identities=21% Similarity=0.333 Sum_probs=172.2
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.++.. ....+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~y~~~--------~~~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 72 (287)
T PRK13637 3 IKIENLTHIYMEG--------TPFEKKALDNVNIEIEDGEFVGLIGHTGSGKSTLIQHLNGLLK--PTSGKIIIDGVDIT 72 (287)
T ss_pred EEEEEEEEECCCC--------CccccceeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCccEEEECCEECC
Confidence 5677776654210 0012469999999999999999999999999999999999877 45899999998864
Q ss_pred h-----hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccc--cccccccCCCCCCCCCH
Q 045902 958 Q-----ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMK--ALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 958 ~-----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~--~~~~~~~~~~~~~~LSg 1025 (1472)
. ...++.+||++|++. .+...||+|++.|..... .+.. ..++++++.+++. +..++. +..|||
T Consensus 73 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~~LSg 147 (287)
T PRK13637 73 DKKVKLSDIRKKVGLVFQYPEYQLFEETIEKDIAFGPINLGLSEEEIENRVKRAMNIVGLDYEDYKDKS-----PFELSG 147 (287)
T ss_pred CcCccHHHHhhceEEEecCchhccccccHHHHHHhHHHHCCCCHHHHHHHHHHHHHHcCCCchhhccCC-----cccCCH
Confidence 3 234578999999863 334579999998865432 2222 3456778887775 444443 357999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
|||||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.||++++|++ |++++
T Consensus 148 Gq~qrv~iAraL~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvi~vtHd~~-~~~~~~drv~~l~~-G~i~~ 225 (287)
T PRK13637 148 GQKRRVAIAGVVAMEPKILILDEPTAGLDPKGRDEILNKIKELHKEYNMTIILVSHSME-DVAKLADRIIVMNK-GKCEL 225 (287)
T ss_pred HHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 899999999975 46678999999986 78998
Q ss_pred EcCC
Q 045902 1105 AGPL 1108 (1472)
Q Consensus 1105 ~g~~ 1108 (1472)
.|+.
T Consensus 226 ~g~~ 229 (287)
T PRK13637 226 QGTP 229 (287)
T ss_pred ECCH
Confidence 8875
No 164
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-35 Score=333.66 Aligned_cols=196 Identities=28% Similarity=0.397 Sum_probs=166.3
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYE 982 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 982 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+.+||++|++.+++.+||.|
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~--~~~~~~~v~q~~~~~~~~tv~e 89 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVP--YQHGSITLDGKPVEG--PGAERGVVFQNEGLLPWRNVQD 89 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCC--CCCcEEEEeCCCccCCCCcHHH
Confidence 469999999999999999999999999999999999876 358999999987643 2345799999998889999999
Q ss_pred HHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHH
Q 045902 983 SLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1058 (1472)
Q Consensus 983 ~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~ 1058 (1472)
|+.+....+ .+.. ..++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|||+.++
T Consensus 90 ~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~ 164 (255)
T PRK11248 90 NVAFGLQLAGVEKMQRLEIAHQMLKKVGLEGAEKRY-----IWQLSGGQRQRVGIARALAANPQLLLLDEPFGALDAFTR 164 (255)
T ss_pred HHHhHHHHcCCCHHHHHHHHHHHHHHcCChhHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHH
Confidence 998764432 2221 3467788888887665543 347999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEec-CcEEEEEcCC
Q 045902 1059 AIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKR-GGHVIYAGPL 1108 (1472)
Q Consensus 1059 ~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~-gg~v~~~g~~ 1108 (1472)
..+.+.|+++++ .|+|||++||+++ ++.+.||++++|++ +|+++..++.
T Consensus 165 ~~l~~~L~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~~~G~i~~~~~~ 215 (255)
T PRK11248 165 EQMQTLLLKLWQETGKQVLLITHDIE-EAVFMATELVLLSPGPGRVVERLPL 215 (255)
T ss_pred HHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeCCCcEEEEEecC
Confidence 999999999854 5899999999986 57788999999985 5889887764
No 165
>COG1137 YhbG ABC-type (unclassified) transport system, ATPase component [General function prediction only]
Probab=100.00 E-value=5.8e-36 Score=309.23 Aligned_cols=210 Identities=23% Similarity=0.363 Sum_probs=180.6
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCC----ceEEEEcCCCCCC
Q 045902 184 RKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQ----RTCAYISQHDLHH 259 (1472)
Q Consensus 184 ~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~----~~~~yv~Q~d~~~ 259 (1472)
+++++++|||+.+++||+++++|||||||||.+.++.|+..++ +|+|.+||.+++.++.. ..+||+||++..|
T Consensus 15 ~kr~Vv~~Vsl~v~~GEiVGLLGPNGAGKTT~Fymi~Glv~~d---~G~i~ld~~diT~lPm~~RArlGigYLpQE~SIF 91 (243)
T COG1137 15 KKRKVVNDVSLEVNSGEIVGLLGPNGAGKTTTFYMIVGLVRPD---SGKILLDDEDITKLPMHKRARLGIGYLPQEASIF 91 (243)
T ss_pred CCeeeeeeeeEEEcCCcEEEEECCCCCCceeEEEEEEEEEecC---CceEEECCcccccCChHHHhhcCcccccccchHh
Confidence 3467999999999999999999999999999999999999998 99999999999987643 3689999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
..|||+|||.-..+.+.... .+++ .+...+.+|+.|.|.|++|..-.
T Consensus 92 r~LtV~dNi~~vlE~~~~d~--------~~~~------------------------~~~~l~~LL~ef~i~hlr~~~a~- 138 (243)
T COG1137 92 RKLTVEDNIMAVLEIREKDL--------KKAE------------------------RKEELDALLEEFHITHLRDSKAY- 138 (243)
T ss_pred hcCcHHHHHHHHHhhhhcch--------hHHH------------------------HHHHHHHHHHHhchHHHhcCccc-
Confidence 99999999976654322100 0000 11234678999999999997655
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.||||||||+-|||||+.+|+.++||||++|.||.+..+|.+.++.+++ .|.-|+++-| .-.|+.+.+||.+++
T Consensus 139 ----sLSGGERRR~EIARaLa~~P~fiLLDEPFAGVDPiaV~dIq~iI~~L~~-rgiGvLITDH-NVREtL~i~dRaYIi 212 (243)
T COG1137 139 ----SLSGGERRRVEIARALAANPKFILLDEPFAGVDPIAVIDIQRIIKHLKD-RGIGVLITDH-NVRETLDICDRAYII 212 (243)
T ss_pred ----ccccchHHHHHHHHHHhcCCCEEEecCCccCCCchhHHHHHHHHHHHHh-CCceEEEccc-cHHHHHhhhheEEEE
Confidence 4999999999999999999999999999999999999999999999976 6888888765 456999999999999
Q ss_pred cCCeEEEecChhHHHH
Q 045902 420 SEGEIVYQGPREYVLD 435 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~~ 435 (1472)
++|++..+|+++++.+
T Consensus 213 ~~G~vla~G~p~ei~~ 228 (243)
T COG1137 213 SDGKVLAEGSPEEIVN 228 (243)
T ss_pred ecCeEEecCCHHHHhc
Confidence 9999999999998753
No 166
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=1.5e-35 Score=330.47 Aligned_cols=192 Identities=28% Similarity=0.463 Sum_probs=159.7
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCC--CCCCH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHS--PNVTI 980 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~--~~lTv 980 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. ..++.++|++|++.+. ..+||
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~--~~~~~i~~v~q~~~~~~~~~~tv 87 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLK--PTSGSIRVFGKPLE--KERKRIGYVPQRRSIDRDFPISV 87 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCccHH--HHHhheEEeccccccccCCCCcH
Confidence 469999999999999999999999999999999999876 35899999998653 3456789999998763 34899
Q ss_pred HHHHHHHHHcC-----CCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 981 YESLLYSAWLR-----LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 981 ~e~l~~~~~l~-----~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
+||+.+..... ... ...++++++.+++.+..++.+ ..||||||||++||+||+.+|++|+|||||+|
T Consensus 88 ~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~llllDEPt~~ 162 (213)
T cd03235 88 RDVVLMGLYGHKGLFRRLSKADKAKVDEALERVGLSELADRQI-----GELSGGQQQRVLLARALVQDPDLLLLDEPFAG 162 (213)
T ss_pred HHHHHhccccccccccCCCHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 99998754321 111 234667788888876555543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ | +++.|
T Consensus 163 LD~~~~~~l~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-~-~~~~g 213 (213)
T cd03235 163 VDPKTQEDIYELLRELRREGMTILVVTHDLG-LVLEYFDRVLLLNR-T-VVASG 213 (213)
T ss_pred CCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEcC-c-EeecC
Confidence 9999999999999999877999999999976 46678999999974 5 55543
No 167
>cd03296 ABC_CysA_sulfate_importer Part of the ABC transporter complex cysAWTP involved in sulfate import. Responsible for energy coupling to the transport system. The complex is composed of two ATP-binding proteins (cysA), two transmembrane proteins (cysT and cysW), and a solute-binding protein (cysP). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.9e-35 Score=329.91 Aligned_cols=209 Identities=29% Similarity=0.430 Sum_probs=172.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++++ +|+|.++|.++..... ++.++|++|++.+++.+||
T Consensus 15 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~tv 91 (239)
T cd03296 15 FVALDDVSLDIPSGELVALLGPSGSGKTTLLRLIAGLERPD---SGTILFGGEDATDVPVQERNVGFVFQHYALFRHMTV 91 (239)
T ss_pred EEeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCccccceEEEecCCcccCCCCH
Confidence 35999999999999999999999999999999999999887 8999999998765432 3579999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.+.....+...+. .. .+. ....+.+++.+||++..++.+++
T Consensus 92 ~e~l~~~~~~~~~~~~~------~~----------~~~--------------~~~~~~~l~~~~l~~~~~~~~~~----- 136 (239)
T cd03296 92 FDNVAFGLRVKPRSERP------PE----------AEI--------------RAKVHELLKLVQLDWLADRYPAQ----- 136 (239)
T ss_pred HHHHhhhhhhccccccC------CH----------HHH--------------HHHHHHHHHHcCChhhhhcChhh-----
Confidence 99998864322110000 00 000 00134578889998777766654
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..++|+|++.|++ .++.+++|++++|++|++
T Consensus 137 LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tvii~sH~~-~~~~~~~d~i~~l~~G~i 215 (239)
T cd03296 137 LSGGQRQRVALARALAVEPKVLLLDEPFGALDAKVRKELRRWLRRLHDELHVTTVFVTHDQ-EEALEVADRVVVMNKGRI 215 (239)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhCCEEEEEECCeE
Confidence 9999999999999999999999999999999999999999999999875578999888776 467789999999999999
Q ss_pred EEecChhHH
Q 045902 425 VYQGPREYV 433 (1472)
Q Consensus 425 v~~G~~~~~ 433 (1472)
++.|+.+++
T Consensus 216 ~~~~~~~~~ 224 (239)
T cd03296 216 EQVGTPDEV 224 (239)
T ss_pred EEecCHHHH
Confidence 999998765
No 168
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.8e-35 Score=338.10 Aligned_cols=218 Identities=24% Similarity=0.339 Sum_probs=175.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCC-------CCCceEEEEcCCCC-
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEF-------VPQRTCAYISQHDL- 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------~~~~~~~yv~Q~d~- 257 (1472)
+++|+|||++|++||+++|+||||||||||+++|+|.++++ +|+|.++|+++... ..++.++||+|++.
T Consensus 20 ~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (290)
T PRK13634 20 RRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQPT---SGTVTIGERVITAGKKNKKLKPLRKKVGIVFQFPEH 96 (290)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhhEEEEeeCchh
Confidence 45999999999999999999999999999999999999987 89999999987532 11357999999862
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-cccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADIM 336 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 336 (1472)
.+...||+||+.|+.+..+.. ..+ . ...++.+++.+||. +..++.
T Consensus 97 ~l~~~tv~eni~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~gL~~~~~~~~ 142 (290)
T PRK13634 97 QLFEETVEKDICFGPMNFGVS----------EED----------A--------------KQKAREMIELVGLPEELLARS 142 (290)
T ss_pred hhhhhhHHHHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHHCCCChhhhhCC
Confidence 344579999998864322110 000 0 00235678899997 556765
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 337 VGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 337 vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
+. .|||||||||+||++|+.+|++|+|||||+|||+.++.++.+.|+++++..+.|+|++.|++ .++.+++|+|
T Consensus 143 ~~-----~LSgGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~-~~~~~~~drv 216 (290)
T PRK13634 143 PF-----ELSGGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSM-EDAARYADQI 216 (290)
T ss_pred cc-----cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEE
Confidence 54 49999999999999999999999999999999999999999999999776688998888765 4788899999
Q ss_pred EEecCCeEEEecChhHHH---HHHHhcCCCCCC
Q 045902 417 ILLSEGEIVYQGPREYVL---DFFESVGFRCPE 446 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~~---~~F~~~G~~cp~ 446 (1472)
++|++|++++.|+++++. ..+...|..+|.
T Consensus 217 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~ 249 (290)
T PRK13634 217 VVMHKGTVFLQGTPREIFADPDELEAIGLDLPE 249 (290)
T ss_pred EEEECCEEEEECCHHHHhcCHHHHHHCCCCCCH
Confidence 999999999999988764 233344555443
No 169
>cd03219 ABC_Mj1267_LivG_branched The Mj1267/LivG ABC transporter subfamily is involved in the transport of the hydrophobic amino acids leucine, isoleucine and valine. MJ1267 is a branched-chain amino acid transporter with 29% similarity to both the LivF and LivG components of the E. coli branched-chain amino acid transporter. MJ1267 contains an insertion from residues 114 to 123 characteristic of LivG (Leucine-Isoleucine-Valine) homologs. The branched-chain amino acid transporter from E. coli comprises a heterodimer of ABCs (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ).
Probab=100.00 E-value=8.2e-35 Score=329.71 Aligned_cols=214 Identities=27% Similarity=0.373 Sum_probs=173.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++++ +|+|.++|.++....+ ++.++|++|++.+++.
T Consensus 13 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~l~~~ 89 (236)
T cd03219 13 LVALDDVSFSVRPGEIHGLIGPNGAGKTTLFNLISGFLRPT---SGSVLFDGEDITGLPPHEIARLGIGRTFQIPRLFPE 89 (236)
T ss_pred EEEecCceEEecCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEECCCCCHHHHHhcCEEEEecccccccC
Confidence 35999999999999999999999999999999999999887 8999999998865432 2459999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.+......... ..+. .......+. ...++.+++.+||++..++.++
T Consensus 90 ~tv~~~l~~~~~~~~~~~-------~~~~---~~~~~~~~~--------------~~~~~~~l~~~~l~~~~~~~~~--- 142 (236)
T cd03219 90 LTVLENVMVAAQARTGSG-------LLLA---RARREEREA--------------RERAEELLERVGLADLADRPAG--- 142 (236)
T ss_pred CCHHHHHHHHHhhccccc-------cccc---cccccHHHH--------------HHHHHHHHHHcCccchhhCChh---
Confidence 999999988643221000 0000 000000000 0123567889999877776665
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++ .++|+|++.|++. ++.+++|++++|++
T Consensus 143 --~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH~~~-~~~~~~d~i~~l~~ 218 (236)
T cd03219 143 --ELSYGQQRRLEIARALATDPKLLLLDEPAAGLNPEETEELAELIRELRE-RGITVLLVEHDMD-VVMSLADRVTVLDQ 218 (236)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEecCHH-HHHHhCCEEEEEeC
Confidence 4999999999999999999999999999999999999999999999876 5788888877654 77789999999999
Q ss_pred CeEEEecChhHH
Q 045902 422 GEIVYQGPREYV 433 (1472)
Q Consensus 422 G~iv~~G~~~~~ 433 (1472)
|++++.|+++++
T Consensus 219 G~i~~~~~~~~~ 230 (236)
T cd03219 219 GRVIAEGTPDEV 230 (236)
T ss_pred CEEEeecCHHHh
Confidence 999999998776
No 170
>cd03265 ABC_DrrA DrrA is the ATP-binding protein component of a bacterial exporter complex that confers resistance to the antibiotics daunorubicin and doxorubicin. In addition to DrrA, the complex includes an integral membrane protein called DrrB. DrrA belongs to the ABC family of transporters and shares sequence and functional similarities with a protein found in cancer cells called P-glycoprotein. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.4e-35 Score=326.94 Aligned_cols=205 Identities=29% Similarity=0.402 Sum_probs=171.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 263 (1472)
+++|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 13 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (220)
T cd03265 13 FEAVRGVSFRVRRGEIFGLLGPNGAGKTTTIKMLTTLLKPT---SGRATVAGHDVVREPREVRRRIGIVFQDLSVDDELT 89 (220)
T ss_pred EEeeeceeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecCcChHHHhhcEEEecCCccccccCc
Confidence 46999999999999999999999999999999999999887 899999998875321 1357999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.+..+..+.. ..+ . ...++.+++.+||++..|+.+++
T Consensus 90 v~~~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~---- 131 (220)
T cd03265 90 GWENLYIHARLYGVP----------GAE----------R--------------RERIDELLDFVGLLEAADRLVKT---- 131 (220)
T ss_pred HHHHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHHcCCHHHhhCChhh----
Confidence 999998864322110 000 0 00135678899998877777654
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|+
T Consensus 132 -LS~G~~qr~~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~tH~~-~~~~~~~d~i~~l~~G~ 209 (220)
T cd03265 132 -YSGGMRRRLEIARSLVHRPEVLFLDEPTIGLDPQTRAHVWEYIEKLKEEFGMTILLTTHYM-EEAEQLCDRVAIIDHGR 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999999775578888877665 47788999999999999
Q ss_pred EEEecChhHH
Q 045902 424 IVYQGPREYV 433 (1472)
Q Consensus 424 iv~~G~~~~~ 433 (1472)
++..|+++++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03265 210 IIAEGTPEEL 219 (220)
T ss_pred EEEeCChHHc
Confidence 9999987653
No 171
>PRK11629 lolD lipoprotein transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=326.71 Aligned_cols=201 Identities=21% Similarity=0.317 Sum_probs=167.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 258 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|.++++ +|+|+++|+++..... ++.++|++|++.+
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~~ 98 (233)
T PRK11629 22 TDVLHNVSFSIGEGEMMAIVGSSGSGKSTLLHLLGGLDTPT---SGDVIFNGQPMSKLSSAAKAELRNQKLGFIYQFHHL 98 (233)
T ss_pred eeeEEeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCCHHHHHHHHhccEEEEecCccc
Confidence 46999999999999999999999999999999999999887 8999999998876432 2469999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
++.+||+||+.+.....+.. ..+ . ...++.+++.+||++..++.++
T Consensus 99 ~~~~tv~e~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~gl~~~~~~~~~ 144 (233)
T PRK11629 99 LPDFTALENVAMPLLIGKKK----------PAE----------I--------------NSRALEMLAAVGLEHRANHRPS 144 (233)
T ss_pred CCCCCHHHHHHHHHHhcCCC----------HHH----------H--------------HHHHHHHHHHcCCchhhhCChh
Confidence 99999999998864321110 000 0 0013457888999877776654
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
.|||||||||+||++++.+|++++|||||+|||+.++.++.+.|+++++..+.|+|++.|++. ++. .+|++++
T Consensus 145 -----~LSgG~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~sH~~~-~~~-~~~~~~~ 217 (233)
T PRK11629 145 -----ELSGGERQRVAIARALVNNPRLVLADEPTGNLDARNADSIFQLLGELNRLQGTAFLVVTHDLQ-LAK-RMSRQLE 217 (233)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHH-hhCEEEE
Confidence 499999999999999999999999999999999999999999999987656789999888764 444 4689999
Q ss_pred ecCCeEEEecCh
Q 045902 419 LSEGEIVYQGPR 430 (1472)
Q Consensus 419 L~~G~iv~~G~~ 430 (1472)
|++|++++.|+.
T Consensus 218 l~~G~i~~~~~~ 229 (233)
T PRK11629 218 MRDGRLTAELSL 229 (233)
T ss_pred EECCEEEEEecc
Confidence 999999998874
No 172
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=6.2e-35 Score=373.58 Aligned_cols=207 Identities=23% Similarity=0.344 Sum_probs=172.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|++++||+.++|+||||||||||+++|+|.+ |+ +|+|.+||+++++..+ ++.++||+|++.+|+ .
T Consensus 363 ~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p~---~G~I~i~g~~i~~~~~~~lr~~i~~v~Q~~~LF~-~ 437 (588)
T PRK11174 363 KTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-PY---QGSLKINGIELRELDPESWRKHLSWVGQNPQLPH-G 437 (588)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-CC---CcEEEECCEecccCCHHHHHhheEEecCCCcCCC-c
Confidence 36899999999999999999999999999999999999 76 8999999999988764 468999999998886 5
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++|||.++..- ..++++.+..+.+.+ +..++ .|++..||.||+ .+
T Consensus 438 TI~eNI~~g~~~----------------------~~~eei~~al~~a~l---------~~~i~--~lp~G~dT~vge-~G 483 (588)
T PRK11174 438 TLRDNVLLGNPD----------------------ASDEQLQQALENAWV---------SEFLP--LLPQGLDTPIGD-QA 483 (588)
T ss_pred CHHHHhhcCCCC----------------------CCHHHHHHHHHHhCH---------HHHHH--hccccccccccc-CC
Confidence 999999885210 011223333332222 12222 356677999995 57
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
..||||||||++||||++++|+||+||||||+||+.++..|.+.|+++. .++|+|+..|++ ++.+.+|+|++|++|
T Consensus 484 ~~LSGGQrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~--~~~TvIiItHrl--~~i~~aD~Iivl~~G 559 (588)
T PRK11174 484 AGLSVGQAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS--RRQTTLMVTHQL--EDLAQWDQIWVMQDG 559 (588)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--CCCEEEEEecCh--HHHHhCCEEEEEeCC
Confidence 7899999999999999999999999999999999999999999999875 468999988887 567789999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
+++++|+++++.+
T Consensus 560 ~i~e~G~~~eL~~ 572 (588)
T PRK11174 560 QIVQQGDYAELSQ 572 (588)
T ss_pred eEeecCCHHHHHh
Confidence 9999999998864
No 173
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.8e-35 Score=331.04 Aligned_cols=211 Identities=22% Similarity=0.355 Sum_probs=173.0
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~ 69 (237)
T PRK11614 5 MLSFDKVSAHY-------------GKIQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPR--ATSGRIVFDGKDI 69 (237)
T ss_pred EEEEEeEEEee-------------CCceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCceEEECCEec
Confidence 36677777654 23569999999999999999999999999999999999876 3589999999875
Q ss_pred Chh----cccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCc--hHHHHHHHHHc-ccccccccccCCCCCCCCCHHHHH
Q 045902 957 KQE----TFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPK--DMFVEEVMELV-EMKALRNSLVGLPGVDGLSTEQRK 1029 (1472)
Q Consensus 957 ~~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~--~~~~~~v~~~l-~l~~~~~~~~~~~~~~~LSgGqrq 1029 (1472)
... ..++.++|++|+..+++.+||.||+.+........ ...++++++.+ ++.+..+.. ...|||||||
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~q 144 (237)
T PRK11614 70 TDWQTAKIMREAVAIVPEGRRVFSRMTVEENLAMGGFFAERDQFQERIKWVYELFPRLHERRIQR-----AGTMSGGEQQ 144 (237)
T ss_pred CCCCHHHHHHhCEEEeccCcccCCCCcHHHHHHHhhhccChhHHHHHHHHHHHHHHHHHHHHhCc-----hhhCCHHHHH
Confidence 431 23567999999999999999999998754322111 12345566666 354444432 3479999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1030 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1030 Rl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
|++||++|+.+|+||+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |++++.|+..
T Consensus 145 rl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 222 (237)
T PRK11614 145 MLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLREQGMTIFLVEQNAN-QALKLADRGYVLEN-GHVVLEDTGD 222 (237)
T ss_pred HHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHhhCCEEEEEeC-CEEEeeCCHH
Confidence 999999999999999999999999999999999999999877999999999976 57889999999985 7899998763
No 174
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-35 Score=337.35 Aligned_cols=210 Identities=26% Similarity=0.360 Sum_probs=173.3
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.++ ++..+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 5 l~~~~l~~~~~------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 70 (274)
T PRK13647 5 IEVEDLHFRYK------------DGTKALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYL--PQRGRVKVMGREVN 70 (274)
T ss_pred EEEEEEEEEeC------------CCCeeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 56777776542 12469999999999999999999999999999999999876 35899999998764
Q ss_pred h---hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcC-CCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHH
Q 045902 958 Q---ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLR-LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRK 1029 (1472)
Q Consensus 958 ~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~-~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrq 1029 (1472)
. ...++.+||++|++. .++..||.||+.|..... .+. ...++++++.+++.+..++.. ..|||||||
T Consensus 71 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LSgG~~q 145 (274)
T PRK13647 71 AENEKWVRSKVGLVFQDPDDQVFSSTVWDDVAFGPVNMGLDKDEVERRVEEALKAVRMWDFRDKPP-----YHLSYGQKK 145 (274)
T ss_pred CCCHHHHHhhEEEEecChhhhhccCcHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCh-----hhCCHHHHH
Confidence 3 234567999999963 445689999998764322 121 134567788888876666543 479999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1030 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1030 Rl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|++||+||+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ .+.+.+|++++|++ |++++.|+.
T Consensus 146 rv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 222 (274)
T PRK13647 146 RVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHNQGKTVIVATHDVD-LAAEWADQVIVLKE-GRVLAEGDK 222 (274)
T ss_pred HHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999999999999999999999877999999999976 46688999999985 788888875
No 175
>cd03294 ABC_Pro_Gly_Bertaine This family comprises the glycine betaine/L-proline ATP binding subunit in bacteria and its equivalents in archaea. This transport system belong to the larger ATP-Binding Cassette (ABC) transporter superfamily. The characteristic feature of these transporters is the obligatory coupling of ATP hydrolysis to substrate translocation. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.7e-35 Score=335.23 Aligned_cols=207 Identities=24% Similarity=0.302 Sum_probs=174.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEcCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYISQHDL 257 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 257 (1472)
.+.+|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|++.
T Consensus 36 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~~~i~~v~q~~~ 112 (269)
T cd03294 36 QTVGVNDVSLDVREGEIFVIMGLSGSGKSTLLRCINRLIEPT---SGKVLIDGQDIAAMSRKELRELRRKKISMVFQSFA 112 (269)
T ss_pred CceEeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccChhhhhhhhcCcEEEEecCcc
Confidence 457999999999999999999999999999999999999887 8999999998765322 246999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMV 337 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 337 (1472)
+++.+||+||+.+.....+... .+ . ...++.+++.+||++..++.+
T Consensus 113 ~~~~~tv~e~l~~~~~~~~~~~----------~~----------~--------------~~~~~~~l~~~~l~~~~~~~~ 158 (269)
T cd03294 113 LLPHRTVLENVAFGLEVQGVPR----------AE----------R--------------EERAAEALELVGLEGWEHKYP 158 (269)
T ss_pred cCCCCcHHHHHHHHHHhcCCCH----------HH----------H--------------HHHHHHHHHHcCCHhHhhCCc
Confidence 9999999999988643221100 00 0 001345788999988788777
Q ss_pred cCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEE
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDII 417 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ii 417 (1472)
++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++.+++|+++
T Consensus 159 ~~-----LS~Gq~qrv~lAral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiii~tH~~~-~~~~~~d~v~ 232 (269)
T cd03294 159 DE-----LSGGMQQRVGLARALAVDPDILLMDEAFSALDPLIRREMQDELLRLQAELQKTIVFITHDLD-EALRLGDRIA 232 (269)
T ss_pred cc-----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEE
Confidence 54 99999999999999999999999999999999999999999999997655789888887654 6788999999
Q ss_pred EecCCeEEEecChhHHH
Q 045902 418 LLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 418 lL~~G~iv~~G~~~~~~ 434 (1472)
+|++|++++.|+.+++.
T Consensus 233 ~l~~G~i~~~g~~~~~~ 249 (269)
T cd03294 233 IMKDGRLVQVGTPEEIL 249 (269)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999987764
No 176
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.4e-35 Score=325.44 Aligned_cols=193 Identities=34% Similarity=0.512 Sum_probs=163.4
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCCH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
+.+|+|+||++++| ++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 13 ~~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 13 KRALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTP--PSSGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 46999999999999 999999999999999999999876 458999999987542 2345678999999999999999
Q ss_pred HHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHH
Q 045902 981 YESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1056 (1472)
Q Consensus 981 ~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~ 1056 (1472)
.|++.+....+. +. ...++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.
T Consensus 90 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~ 164 (211)
T cd03264 90 REFLDYIAWLKGIPSKEVKARVDEVLELVNLGDRAKKKI-----GSLSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPE 164 (211)
T ss_pred HHHHHHHHHHhCCCHHHHHHHHHHHHHHCCCHHHHhCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHH
Confidence 999987654432 11 234667888888876665543 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1057 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1057 ~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
++..+.+.|+++++ +.|||+++|+++ .+.+.+|++++|++ |+++..|
T Consensus 165 ~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-g~i~~~g 211 (211)
T cd03264 165 ERIRFRNLLSELGE-DRIVILSTHIVE-DVESLCNQVAVLNK-GKLVFEG 211 (211)
T ss_pred HHHHHHHHHHHHhC-CCEEEEEcCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999976 599999999976 36678999999986 6777654
No 177
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=7.2e-35 Score=336.10 Aligned_cols=210 Identities=20% Similarity=0.328 Sum_probs=174.3
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+||||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (269)
T PRK11831 7 LVDMRGVSFTR-------------GNRCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIA--PDHGEILFDGENI 71 (269)
T ss_pred eEEEeCeEEEE-------------CCEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEc
Confidence 36777877654 23569999999999999999999999999999999999876 3589999999875
Q ss_pred Ch------hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC--CCch---HHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 957 KQ------ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR--LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 957 ~~------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~--~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
.. ...++.++|++|+..+++.+|+.||+.+..... .+.. ..++++++.+++.+..+..+ ..|||
T Consensus 72 ~~~~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSg 146 (269)
T PRK11831 72 PAMSRSRLYTVRKRMSMLFQSGALFTDMNVFDNVAYPLREHTQLPAPLLHSTVMMKLEAVGLRGAAKLMP-----SELSG 146 (269)
T ss_pred cccChhhHHHHhhcEEEEecccccCCCCCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCH
Confidence 32 123456899999998899999999998754321 1221 24566788888877666543 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||++. ++.+.+|++++|++ |++++
T Consensus 147 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~v~~l~~-G~i~~ 224 (269)
T PRK11831 147 GMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDVP-EVLSIADHAYIVAD-KKIVA 224 (269)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhhCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999765 899999999975 47788999999985 78998
Q ss_pred EcCC
Q 045902 1105 AGPL 1108 (1472)
Q Consensus 1105 ~g~~ 1108 (1472)
.|+.
T Consensus 225 ~g~~ 228 (269)
T PRK11831 225 HGSA 228 (269)
T ss_pred eCCH
Confidence 8875
No 178
>cd03255 ABC_MJ0796_Lo1CDE_FtsE This family is comprised of MJ0796 ATP-binding cassette, macrolide-specific ABC-type efflux carrier (MacAB), and proteins involved in cell division (FtsE), and release of liporoteins from the cytoplasmic membrane (LolCDE). They are clustered together phylogenetically. MacAB is an exporter that confers resistance to macrolides, while the LolCDE system is not a transporter at all. An FtsE null mutants showed filamentous growth and appeared viable on high salt medium only, indicating a role for FtsE in cell division and/or salt transport. The LolCDE complex catalyses the release of lipoproteins from the cytoplasmic membrane prior to their targeting to the outer membrane.
Probab=100.00 E-value=6.2e-35 Score=326.64 Aligned_cols=195 Identities=26% Similarity=0.405 Sum_probs=163.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 258 (1472)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|+++....+ ++.++|++|++.+
T Consensus 17 ~~il~~~s~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 93 (218)
T cd03255 17 VQALKGVSLSIEKGEFVAIVGPSGSGKSTLLNILGGLDRPT---SGEVRVDGTDISKLSEKELAAFRRRHIGFVFQSFNL 93 (218)
T ss_pred eeEEeeeEEEEcCCCEEEEEcCCCCCHHHHHHHHhCCcCCC---ceeEEECCEehhhcchhHHHHHHhhcEEEEeecccc
Confidence 46999999999999999999999999999999999999887 8999999998765431 3569999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
++.+||+||+.+.....+... .+ . ...++.+++.+||++..++.++
T Consensus 94 ~~~~tv~e~l~~~~~~~~~~~----------~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~ 139 (218)
T cd03255 94 LPDLTALENVELPLLLAGVPK----------KE----------R--------------RERAEELLERVGLGDRLNHYPS 139 (218)
T ss_pred CCCCcHHHHHHHHHhhcCCCH----------HH----------H--------------HHHHHHHHHHcCCchhhhcChh
Confidence 999999999988654321100 00 0 0013557889999887776665
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..++|+|++.|++. ++ +.+|++++
T Consensus 140 -----~LS~G~~qrv~la~al~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~v~~ 212 (218)
T cd03255 140 -----ELSGGQQQRVAIARALANDPKIILADEPTGNLDSETGKEVMELLRELNKEAGTTIVVVTHDPE-LA-EYADRIIE 212 (218)
T ss_pred -----hcCHHHHHHHHHHHHHccCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEECCHH-HH-hhhcEEEE
Confidence 499999999999999999999999999999999999999999999997645789999888765 44 48999999
Q ss_pred ecCCeE
Q 045902 419 LSEGEI 424 (1472)
Q Consensus 419 L~~G~i 424 (1472)
|++|++
T Consensus 213 l~~G~i 218 (218)
T cd03255 213 LRDGKI 218 (218)
T ss_pred eeCCcC
Confidence 999974
No 179
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=6.7e-35 Score=328.66 Aligned_cols=194 Identities=27% Similarity=0.324 Sum_probs=159.9
Q ss_pred eeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCC--CCC
Q 045902 904 QLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQND--IHS 975 (1472)
Q Consensus 904 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~--~~~ 975 (1472)
.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++ .++
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 96 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLK--PTSGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSLN 96 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEccccchhhHHHhhccEEEEecCchhhcC
Confidence 69999999999999999999999999999999999876 458999999987642 23456799999998 466
Q ss_pred CCCCHHHHHHHHHHcCCC-c-hH---H-HHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 045902 976 PNVTIYESLLYSAWLRLP-K-DM---F-VEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE 1048 (1472)
Q Consensus 976 ~~lTv~e~l~~~~~l~~~-~-~~---~-~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDE 1048 (1472)
+.+||+||+.+....... . +. . .+++++.+++. ...+.. +..||||||||++|||+|+.+|++|+|||
T Consensus 97 ~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~lllLDE 171 (228)
T cd03257 97 PRMTIGEQIAEPLRIHGKLSKKEARKEAVLLLLVGVGLPEEVLNRY-----PHELSGGQRQRVAIARALALNPKLLIADE 171 (228)
T ss_pred CcCCHHHHHHHHHHhccCCcHHHHHHHHHHHHHHHCCCChhHhhCC-----chhcCHHHHHHHHHHHHHhcCCCEEEecC
Confidence 789999999876543321 1 11 1 13567777774 344443 34799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1049 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1049 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 172 Pt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 228 (228)
T cd03257 172 PTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVAVMYA-GKIVEEG 228 (228)
T ss_pred CCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEEeC-CEEEecC
Confidence 99999999999999999999866 899999999976 46668999999985 6777544
No 180
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=336.36 Aligned_cols=225 Identities=25% Similarity=0.352 Sum_probs=179.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-------CCceEEEEcCCC-C
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-------PQRTCAYISQHD-L 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-~ 257 (1472)
+.+|+|||+.|++||+++|+||||||||||+++|+|.++++ +|+|+++|.++.... .++.++||+|++ .
T Consensus 19 ~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 95 (288)
T PRK13643 19 SRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQPT---EGKVTVGDIVVSSTSKQKEIKPVRKKVGVVFQFPES 95 (288)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCCCC---CcEEEECCEECccccccccHHHHHhhEEEEecCcch
Confidence 35999999999999999999999999999999999999987 899999999875321 135799999986 2
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-cccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADIM 336 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 336 (1472)
.+...||.||+.|+....+.. +.+ .+ ..++.+++.+||. ...++.
T Consensus 96 ~l~~~tv~~~l~~~~~~~~~~----------~~~----------~~--------------~~~~~~l~~~~L~~~~~~~~ 141 (288)
T PRK13643 96 QLFEETVLKDVAFGPQNFGIP----------KEK----------AE--------------KIAAEKLEMVGLADEFWEKS 141 (288)
T ss_pred hcccchHHHHHHhHHHHcCCC----------HHH----------HH--------------HHHHHHHHHcCCChhhccCC
Confidence 344579999999875432210 000 00 0134578888986 355655
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 337 VGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 337 vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
+ +.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|+|
T Consensus 142 ~-----~~LSgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~vtHd~-~~~~~~~dri 214 (288)
T PRK13643 142 P-----FELSGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQ-SGQTVVLVTHLM-DDVADYADYV 214 (288)
T ss_pred c-----ccCCHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCH-HHHHHhCCEE
Confidence 4 45999999999999999999999999999999999999999999999875 488998888765 5777899999
Q ss_pred EEecCCeEEEecChhHHH---HHHHhcCCCCCCCCChHHHH
Q 045902 417 ILLSEGEIVYQGPREYVL---DFFESVGFRCPERKGAADFL 454 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~~---~~F~~~G~~cp~~~~~adfl 454 (1472)
++|++|+++++|+++++. ++++..|+.+|.....++.+
T Consensus 215 ~~l~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 255 (288)
T PRK13643 215 YLLEKGHIISCGTPSDVFQEVDFLKAHELGVPKATHFADQL 255 (288)
T ss_pred EEEECCEEEEECCHHHHHcCHHHHHHcCCCCChHHHHHHHH
Confidence 999999999999998874 34556777777655444433
No 181
>cd03234 ABCG_White The White subfamily represents ABC transporters homologous to the Drosophila white gene, which acts as a dimeric importer for eye pigment precursors. The eye pigmentation of Drosophila is developed from the synthesis and deposition in the cells of red pigments, which are synthesized from guanine, and brown pigments, which are synthesized from tryptophan. The pigment precursors are encoded by the white, brown, and scarlet genes, respectively. Evidence from genetic and biochemical studies suggest that the White and Brown proteins function as heterodimers to import guanine, while the White and Scarlet proteins function to import tryptophan. However, a recent study also suggests that White may be involved in the transport of a metabolite, such as 3-hydroxykynurenine, across intracellular membranes. Mammalian ABC transporters belonging to the White subfamily (ABCG1, ABCG5, and ABCG8) have been shown to be involved in the regulation of lipid-trafficking mechanisms in
Probab=100.00 E-value=1.2e-34 Score=325.92 Aligned_cols=204 Identities=36% Similarity=0.538 Sum_probs=169.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD---KSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGE 261 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~---~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~ 261 (1472)
.+++|+|+|+++++||+++|+||||||||||+++|+|.++ ++ +|+|.++|+++.....++.++|++|++.+++.
T Consensus 19 ~~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLlk~l~G~~~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~ 95 (226)
T cd03234 19 YARILNDVSLHVESGQVMAILGSSGSGKTTLLDAISGRVEGGGTT---SGQILFNGQPRKPDQFQKCVAYVRQDDILLPG 95 (226)
T ss_pred ccccccCceEEEcCCeEEEEECCCCCCHHHHHHHHhCccCCCCCC---ceEEEECCEECChHHhcccEEEeCCCCccCcC
Confidence 3579999999999999999999999999999999999988 65 89999999987643345679999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHH-HHHHhCCcccccccccCc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDY-VLKILGLDICADIMVGNE 340 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-il~~lgL~~~~dt~vg~~ 340 (1472)
+||+||+.|........... + +.. ....+. .++.+++++..++.++
T Consensus 96 ~tv~enl~~~~~~~~~~~~~-------~-----------~~~-------------~~~~~~~~l~~~~l~~~~~~~~~-- 142 (226)
T cd03234 96 LTVRETLTYTAILRLPRKSS-------D-----------AIR-------------KKRVEDVLLRDLALTRIGGNLVK-- 142 (226)
T ss_pred CcHHHHHHHHHHhhcccccc-------h-----------HHH-------------HHHHHHHHHHhhcchhhhccccc--
Confidence 99999999865432110000 0 000 001122 6788888777666554
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|++..++.+++|++++|+
T Consensus 143 ---~LS~G~~qrl~laral~~~p~illlDEP~~gLD~~~~~~~~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~i~~l~ 218 (226)
T cd03234 143 ---GISGGERRRVSIAVQLLWDPKVLILDEPTSGLDSFTALNLVSTLSQLAR-RNRIVILTIHQPRSDLFRLFDRILLLS 218 (226)
T ss_pred ---CcCHHHHHHHHHHHHHHhCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCCCHHHHHhCCEEEEEe
Confidence 4999999999999999999999999999999999999999999999875 478999999887668999999999999
Q ss_pred CCeEEEec
Q 045902 421 EGEIVYQG 428 (1472)
Q Consensus 421 ~G~iv~~G 428 (1472)
+|+++++|
T Consensus 219 ~G~i~~~g 226 (226)
T cd03234 219 SGEIVYSG 226 (226)
T ss_pred CCEEEecC
Confidence 99999876
No 182
>PRK13634 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-35 Score=339.75 Aligned_cols=214 Identities=24% Similarity=0.313 Sum_probs=173.3
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+.... .....+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|+++.
T Consensus 3 l~~~~l~~~y~~~~--------~~~~~~L~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 72 (290)
T PRK13634 3 ITFQKVEHRYQYKT--------PFERRALYDVNVSIPSGSYVAIIGHTGSGKSTLLQHLNGLLQ--PTSGTVTIGERVIT 72 (290)
T ss_pred EEEEEEEEEECCCC--------cccccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 56777777653110 012469999999999999999999999999999999999877 45899999998763
Q ss_pred h-------hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccc-cccccccCCCCCCCCC
Q 045902 958 Q-------ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMK-ALRNSLVGLPGVDGLS 1024 (1472)
Q Consensus 958 ~-------~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~~LS 1024 (1472)
. ..+++.+|||+|++. .+...||.||+.|...... +.. ..++++++.++|. ++.++. +..||
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~LS 147 (290)
T PRK13634 73 AGKKNKKLKPLRKKVGIVFQFPEHQLFEETVEKDICFGPMNFGVSEEDAKQKAREMIELVGLPEELLARS-----PFELS 147 (290)
T ss_pred cccccchHHHHHhhEEEEeeCchhhhhhhhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCChhhhhCC-----cccCC
Confidence 1 234567999999862 2335799999988754322 222 3567788888885 455543 35799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1025 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1025 gGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
|||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++ |.|||++||+++ ++.+.+|++++|.+ |+++
T Consensus 148 gGq~qrv~lAraL~~~P~llllDEPt~~LD~~~~~~l~~~L~~l~~~~g~tviiitHd~~-~~~~~~drv~~l~~-G~i~ 225 (290)
T PRK13634 148 GGQMRRVAIAGVLAMEPEVLVLDEPTAGLDPKGRKEMMEMFYKLHKEKGLTTVLVTHSME-DAARYADQIVVMHK-GTVF 225 (290)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999765 899999999976 57788999999985 7899
Q ss_pred EEcCC
Q 045902 1104 YAGPL 1108 (1472)
Q Consensus 1104 ~~g~~ 1108 (1472)
+.|+.
T Consensus 226 ~~g~~ 230 (290)
T PRK13634 226 LQGTP 230 (290)
T ss_pred EECCH
Confidence 99875
No 183
>cd03301 ABC_MalK_N The N-terminal ATPase domain of the maltose transporter, MalK. ATP binding cassette (ABC) proteins function from bacteria to human, mediating the translocation of substances into and out of cells or organelles. ABC transporters contain two transmembrane-spanning domains (TMDs) or subunits and two nucleotide binding domains (NBDs) or subunits that couple transport to the hydrolysis of ATP. In the maltose transport system, the periplasmic maltose binding protein (MBP) stimulates the ATPase activity of the membrane-associated transporter, which consists of two transmembrane subunits, MalF and MalG, and two copies of the ATP binding subunit, MalK, and becomes tightly bound to the transporter in the catalytic transition state, ensuring that maltose is passed to the transporter as ATP is hydrolyzed.
Probab=100.00 E-value=8.8e-35 Score=324.20 Aligned_cols=199 Identities=28% Similarity=0.410 Sum_probs=168.5
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCHH
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTVR 265 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~ 265 (1472)
++|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|++.+++.+||+
T Consensus 14 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~v~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~ 90 (213)
T cd03301 14 TALDDLNLDIADGEFVVLLGPSGCGKTTTLRMIAGLEEPT---SGRIYIGGRDVTDLPPKDRDIAMVFQNYALYPHMTVY 90 (213)
T ss_pred eeeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCCcccceEEEEecChhhccCCCHH
Confidence 5899999999999999999999999999999999999887 8999999998765432 35799999999999999999
Q ss_pred HHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCC
Q 045902 266 ETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGI 345 (1472)
Q Consensus 266 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 345 (1472)
||+.+..+..+.. ..+ . ...++.+++.+||++..++.+++ |
T Consensus 91 ~~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~-----L 131 (213)
T cd03301 91 DNIAFGLKLRKVP----------KDE----------I--------------DERVREVAELLQIEHLLDRKPKQ-----L 131 (213)
T ss_pred HHHHHHHHhcCCC----------HHH----------H--------------HHHHHHHHHHcCCHHHHhCChhh-----C
Confidence 9998764322110 000 0 00135578889998877777654 9
Q ss_pred ChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEE
Q 045902 346 SGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIV 425 (1472)
Q Consensus 346 SGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv 425 (1472)
|||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|+++
T Consensus 132 S~G~~qr~~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvi~~sH~~-~~~~~~~d~i~~l~~g~~~ 210 (213)
T cd03301 132 SGGQRQRVALGRAIVREPKVFLMDEPLSNLDAKLRVQMRAELKRLQQRLGTTTIYVTHDQ-VEAMTMADRIAVMNDGQIQ 210 (213)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCeEEEEECCEEE
Confidence 999999999999999999999999999999999999999999999875678999888775 4777899999999999999
Q ss_pred Eec
Q 045902 426 YQG 428 (1472)
Q Consensus 426 ~~G 428 (1472)
+.|
T Consensus 211 ~~g 213 (213)
T cd03301 211 QIG 213 (213)
T ss_pred ecC
Confidence 876
No 184
>TIGR00960 3a0501s02 Type II (General) Secretory Pathway (IISP) Family protein.
Probab=100.00 E-value=8.4e-35 Score=325.06 Aligned_cols=195 Identities=23% Similarity=0.361 Sum_probs=163.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|++.++
T Consensus 16 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 92 (216)
T TIGR00960 16 QPALDNLNFHITKGEMVFLVGHSGAGKSTFLKLILGIEKPT---RGKIRFNGQDLTRLRGREIPFLRRHIGMVFQDHRLL 92 (216)
T ss_pred eeEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEehhhcChhHHHHHHHhceEEecCcccc
Confidence 35999999999999999999999999999999999999887 8999999998764321 35799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||+||+.+..+..+.. ..+ . ...++.+++.+||++..++.++
T Consensus 93 ~~~tv~e~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~- 137 (216)
T TIGR00960 93 SDRTVYDNVAFPLRIIGVP----------PRD----------A--------------NERVSAALEKVGLEGKAHALPM- 137 (216)
T ss_pred ccccHHHHHHHHHHhcCCC----------HHH----------H--------------HHHHHHHHHHcCChhhhhCChh-
Confidence 9999999998864422110 000 0 0013457888999887776665
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ +++.+++|++++|
T Consensus 138 ----~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~vsH~~-~~~~~~~d~i~~l 211 (216)
T TIGR00960 138 ----QLSGGEQQRVAIARAIVHKPPLLLADEPTGNLDPELSRDIMRLFEEFNR-RGTTVLVATHDI-NLVETYRHRTLTL 211 (216)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 4999999999999999999999999999999999999999999999865 478888887765 4677899999999
Q ss_pred cCCeE
Q 045902 420 SEGEI 424 (1472)
Q Consensus 420 ~~G~i 424 (1472)
++|++
T Consensus 212 ~~G~i 216 (216)
T TIGR00960 212 SRGRL 216 (216)
T ss_pred eCCcC
Confidence 99974
No 185
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=3.8e-35 Score=326.64 Aligned_cols=189 Identities=28% Similarity=0.412 Sum_probs=158.7
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCC-CCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDI-HSPNV 978 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~-~~~~l 978 (1472)
+.+|+|+||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. .++.+
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~~ 91 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLG--PTSGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFGP 91 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEcccCCHHHHHhhceEEecChhhhcCCC
Confidence 569999999999999999999999999999999999876 458999999987532 234567899999974 36678
Q ss_pred CHHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 045902 979 TIYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1054 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD 1054 (1472)
|+.||+.+...... .. ...++++++.+++.+..++.. ..||||||||++|||||+.+|++|+|||||+|||
T Consensus 92 t~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~~LD 166 (211)
T cd03225 92 TVEEEVAFGLENLGLPEEEIEERVEEALELVGLEGLRDRSP-----FTLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLD 166 (211)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCC
Confidence 99999987654321 11 134567788888876555443 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1055 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1055 ~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|.+|
T Consensus 167 ~~~~~~~~~~l~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~G 210 (211)
T cd03225 167 PAGRRELLELLKKLKAEGKTIIIVTHDLD-LLLELADRVIVLEDG 210 (211)
T ss_pred HHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 99999999999999877999999999976 466779999999863
No 186
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=1.3e-34 Score=328.05 Aligned_cols=196 Identities=30% Similarity=0.433 Sum_probs=164.3
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCCH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ....+.++|++|++.+++.+|+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t~ 91 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYV--AQEGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLSV 91 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCcH
Confidence 569999999999999999999999999999999999876 358999999987532 1223568999999988889999
Q ss_pred HHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHH
Q 045902 981 YESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1056 (1472)
Q Consensus 981 ~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~ 1056 (1472)
+|++.+....+. +. ...++++++.+++.+..++.. ..||||||||++||++|+.+|++|+|||||+|||+.
T Consensus 92 ~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEP~~~LD~~ 166 (236)
T TIGR03864 92 RQNLRYHAALHGLSRAEARERIAALLARLGLAERADDKV-----RELNGGHRRRVEIARALLHRPALLLLDEPTVGLDPA 166 (236)
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHH
Confidence 999987654432 21 134567778888776555443 479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1057 AAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1057 ~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
++..+.+.|+++++ +|+|||+++|+++. + +.+|++++|++ |+++..|+.
T Consensus 167 ~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~i~~l~~-G~i~~~~~~ 216 (236)
T TIGR03864 167 SRAAIVAHVRALCRDQGLSVLWATHLVDE-I-EADDRLVVLHR-GRVLADGAA 216 (236)
T ss_pred HHHHHHHHHHHHHHhCCCEEEEEecChhh-H-hhCCEEEEEeC-CeEEEeCCH
Confidence 99999999999975 58999999999863 4 45999999985 788888864
No 187
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-34 Score=320.17 Aligned_cols=196 Identities=31% Similarity=0.589 Sum_probs=163.3
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCcc
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-YIEGSISISGYP 955 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~G~~ 955 (1472)
.++|+|++|.++.+ .+++.+|+|+|++|++||++||+||||||||||+++|+|..++. +.+|+|.++|.+
T Consensus 3 ~~~~~~~~~~~~~~---------~~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~G~i~i~g~~ 73 (202)
T cd03233 3 TLSWRNISFTTGKG---------RSKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSVEGDIHYNGIP 73 (202)
T ss_pred eEEEEccEEEeccC---------CCCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCcceEEEECCEE
Confidence 57899999988542 13457999999999999999999999999999999999987632 468999999987
Q ss_pred CCh--hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHH
Q 045902 956 KKQ--ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTI 1033 (1472)
Q Consensus 956 ~~~--~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~i 1033 (1472)
... ...++.++|++|++.+++.+||+|++.+..... .+.. +..||+|||||++|
T Consensus 74 ~~~~~~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~-------------------~~~~-----~~~LS~Ge~qrl~l 129 (202)
T cd03233 74 YKEFAEKYPGEIIYVSEEDVHFPTLTVRETLDFALRCK-------------------GNEF-----VRGISGGERKRVSI 129 (202)
T ss_pred CccchhhhcceEEEEecccccCCCCcHHHHHhhhhhhc-------------------cccc-----hhhCCHHHHHHHHH
Confidence 643 234567999999999999999999998754221 1222 34799999999999
Q ss_pred HHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1034 AVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1034 A~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
|+||+.+|++|+|||||+|||+.++..+++.|++++++ +.|+|+++|+...++.+.+|++++|++ |++++.|
T Consensus 130 aral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~l~~-G~i~~~g 202 (202)
T cd03233 130 AEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLVLYE-GRQIYYG 202 (202)
T ss_pred HHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEEEEC-CEEEecC
Confidence 99999999999999999999999999999999999765 678777776654467889999999986 7887654
No 188
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-35 Score=331.31 Aligned_cols=197 Identities=28% Similarity=0.416 Sum_probs=167.1
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~~~~~~l 978 (1472)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVP--RDAGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRRL 93 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEECCCCCHHHHHHhCeEEeccCCcccccC
Confidence 569999999999999999999999999999999999876 458999999987532 12346789999999999999
Q ss_pred CHHHHHHHHHHcCC--Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 979 TIYESLLYSAWLRL--PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~--~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
|+.||+.+....+. .. ...++++++.+++.+..+.. ...||||||||++||++|+.+|++|+|||||+||
T Consensus 94 tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~L 168 (241)
T PRK10895 94 SVYDNLMAVLQIRDDLSAEQREDRANELMEEFHIEHLRDSM-----GQSLSGGERRRVEIARALAANPKFILLDEPFAGV 168 (241)
T ss_pred cHHHHHhhhhhcccccCHHHHHHHHHHHHHHcCCHHHhhcc-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccC
Confidence 99999987643321 11 13466778888876655543 3479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1054 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+.++..+.+.+++++++|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 169 D~~~~~~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 221 (241)
T PRK10895 169 DPISVIDIKRIIEHLRDSGLGVLITDHNVR-ETLAVCERAYIVSQ-GHLIAHGTP 221 (241)
T ss_pred CHHHHHHHHHHHHHHHhcCCEEEEEEcCHH-HHHHhcCEEEEEeC-CeEEeeCCH
Confidence 999999999999999877999999999975 57788999999985 788888875
No 189
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9.2e-35 Score=327.95 Aligned_cols=198 Identities=27% Similarity=0.357 Sum_probs=166.0
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---h-cccceeEEeccCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---E-TFARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~-~~~~~~gyv~Q~~~~~~~l 978 (1472)
+.+|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... . ..++.++|++|++.+++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLP--VKSGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPRL 90 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCCC
Confidence 569999999999999999999999999999999999876 458999999987532 1 1245689999999999999
Q ss_pred CHHHHHHHHHHcCCCc-hHHHHHHHHHcc-cccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHH
Q 045902 979 TIYESLLYSAWLRLPK-DMFVEEVMELVE-MKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1056 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~~~-~~~~~~v~~~l~-l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~ 1056 (1472)
|+.|++.+....+... ....+++++.++ +.+..++. +..||||||||++||++|+.+|++|+|||||+|||+.
T Consensus 91 tv~~~l~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~ 165 (230)
T TIGR03410 91 TVEENLLTGLAALPRRSRKIPDEIYELFPVLKEMLGRR-----GGDLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPS 165 (230)
T ss_pred cHHHHHHHHHHhcCcchHHHHHHHHHHHHhHHHHhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHH
Confidence 9999998765433222 234567777776 44444443 3479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1057 AAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1057 ~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++..|+.+
T Consensus 166 ~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-g~i~~~~~~~ 217 (230)
T TIGR03410 166 IIKDIGRVIRRLRAEGGMAILLVEQYLD-FARELADRYYVMER-GRVVASGAGD 217 (230)
T ss_pred HHHHHHHHHHHHHHcCCcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 999999999999864 899999999976 46668999999985 7899988864
No 190
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=333.89 Aligned_cols=216 Identities=22% Similarity=0.310 Sum_probs=176.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCC-CCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHD-LHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 261 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (279)
T PRK13650 20 KYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLEAE---SGQIIIDGDLLTEENVWDIRHKIGMVFQNPDNQFVG 96 (279)
T ss_pred CeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHHhhceEEEcChHHhccc
Confidence 35899999999999999999999999999999999999987 9999999999865332 35799999997 46778
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.|+.+..+.. ..+ . ...++.+++.+||++..|..++
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~gL~~~~~~~~~--- 139 (279)
T PRK13650 97 ATVEDDVAFGLENKGIP----------HEE----------M--------------KERVNEALELVGMQDFKEREPA--- 139 (279)
T ss_pred ccHHHHHHhhHHhCCCC----------HHH----------H--------------HHHHHHHHHHCCCHhHhhCCcc---
Confidence 89999998864322110 000 0 0013567889999887776665
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..|.|+|++.|++. ++ ..+|+|++|++
T Consensus 140 --~LSgGq~qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~-~~-~~~dri~~l~~ 215 (279)
T PRK13650 140 --RLSGGQKQRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLD-EV-ALSDRVLVMKN 215 (279)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC
Confidence 499999999999999999999999999999999999999999999998756889999988865 45 57999999999
Q ss_pred CeEEEecChhHHHH---HHHhcCCCCC
Q 045902 422 GEIVYQGPREYVLD---FFESVGFRCP 445 (1472)
Q Consensus 422 G~iv~~G~~~~~~~---~F~~~G~~cp 445 (1472)
|+++..|+++++.. .++..|+.+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13650 216 GQVESTSTPRELFSRGNDLLQLGLDIP 242 (279)
T ss_pred CEEEEECCHHHHHcChHHHHHcCCCCc
Confidence 99999999887642 2334454433
No 191
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=1e-34 Score=325.66 Aligned_cols=192 Identities=26% Similarity=0.339 Sum_probs=161.9
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---h---cccceeEEeccCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---E---TFARISGYCEQNDIHSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~---~~~~~~gyv~Q~~~~~~ 976 (1472)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. . .+++.++|++|++.+++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~~ 92 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIER--PSAGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLLM 92 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEcccCChhHHHHHHhheEEEecCccccc
Confidence 469999999999999999999999999999999999876 458999999987532 1 24567899999998888
Q ss_pred CCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 977 NVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
.+|+.||+.+....+. ..+ ..++++++.+++.+..++. +..||||||||++||+||+.+|++|+|||||+|
T Consensus 93 ~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~laral~~~p~llllDEPt~~ 167 (222)
T PRK10908 93 DRTVYDNVAIPLIIAGASGDDIRRRVSAALDKVGLLDKAKNF-----PIQLSGGEQQRVGIARAVVNKPAVLLADEPTGN 167 (222)
T ss_pred cccHHHHHHhHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCC-----chhCCHHHHHHHHHHHHHHcCCCEEEEeCCCCc
Confidence 9999999988654432 222 2355677888877655544 347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
||+.++..+.+.|+++.++|.|||++||+++ ++.+.+|++++|++ |+++
T Consensus 168 LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~ 216 (222)
T PRK10908 168 LDDALSEGILRLFEEFNRVGVTVLMATHDIG-LISRRSYRMLTLSD-GHLH 216 (222)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEc
Confidence 9999999999999999877899999999976 46678999999986 5653
No 192
>TIGR01288 nodI ATP-binding ABC transporter family nodulation protein NodI. This model does not recognize the highly divergent NodI from Azorhizobium caulinodans.
Probab=100.00 E-value=1e-34 Score=340.26 Aligned_cols=206 Identities=28% Similarity=0.412 Sum_probs=173.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 263 (1472)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 17 ~~~l~~vsl~i~~Ge~~~l~G~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 93 (303)
T TIGR01288 17 KVVVNDLSFTIARGECFGLLGPNGAGKSTIARMLLGMISPD---RGKITVLGEPVPSRARLARVAIGVVPQFDNLDPEFT 93 (303)
T ss_pred eEEEcceeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECcccHHHHhhcEEEEeccccCCcCCc
Confidence 35999999999999999999999999999999999999887 899999999875422 2457999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.+.++..+.. .. +.. ...+.+++.+||++..++.+++
T Consensus 94 v~e~l~~~~~~~~~~----------~~----------~~~--------------~~~~~ll~~~~l~~~~~~~~~~---- 135 (303)
T TIGR01288 94 VRENLLVFGRYFGMS----------TR----------EIE--------------AVIPSLLEFARLESKADVRVAL---- 135 (303)
T ss_pred HHHHHHHHHHHcCCC----------HH----------HHH--------------HHHHHHHHHCCChhHhcCchhh----
Confidence 999998654322110 00 000 0134578889999888877764
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++. ++.+++|++++|++|+
T Consensus 136 -LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~g~til~~sH~~~-~~~~~~d~i~~l~~G~ 212 (303)
T TIGR01288 136 -LSGGMKRRLTLARALINDPQLLILDEPTTGLDPHARHLIWERLRSLLA-RGKTILLTTHFME-EAERLCDRLCVLESGR 212 (303)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEECCCHH-HHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999976 5789888877654 7788999999999999
Q ss_pred EEEecChhHHHH
Q 045902 424 IVYQGPREYVLD 435 (1472)
Q Consensus 424 iv~~G~~~~~~~ 435 (1472)
+++.|+.+++..
T Consensus 213 i~~~g~~~~~~~ 224 (303)
T TIGR01288 213 KIAEGRPHALID 224 (303)
T ss_pred EEEEcCHHHHHh
Confidence 999999988753
No 193
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.8e-35 Score=325.15 Aligned_cols=190 Identities=25% Similarity=0.386 Sum_probs=161.4
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeEEeccCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-----ETFARISGYCEQNDIHSPN 977 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-----~~~~~~~gyv~Q~~~~~~~ 977 (1472)
+.+|+|+||++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEE--PDSGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFPH 90 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccchhHHHHHhcceEEecccccCCC
Confidence 469999999999999999999999999999999999876 358999999987631 2345679999999999999
Q ss_pred CCHHHHHHHHHH-cC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 978 VTIYESLLYSAW-LR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 978 lTv~e~l~~~~~-l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
+|+.||+.+... .+ ...+ ..++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|
T Consensus 91 ~t~~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEP~~~ 165 (213)
T cd03262 91 LTVLENITLAPIKVKGMSKAEAEERALELLEKVGLADKADAYP-----AQLSGGQQQRVAIARALAMNPKVMLFDEPTSA 165 (213)
T ss_pred CcHHHHHHhHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhhCc-----cccCHHHHHHHHHHHHHhcCCCEEEEeCCccC
Confidence 999999987542 22 1211 34567788888876655543 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGH 1101 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~ 1101 (1472)
||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|++ |+
T Consensus 166 LD~~~~~~l~~~l~~~~~~~~tvi~~sh~~~-~~~~~~d~i~~l~~-g~ 212 (213)
T cd03262 166 LDPELVGEVLDVMKDLAEEGMTMVVVTHEMG-FAREVADRVIFMDD-GR 212 (213)
T ss_pred CCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEeC-Cc
Confidence 9999999999999999877899999999976 46678999999986 44
No 194
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-35 Score=333.05 Aligned_cols=211 Identities=22% Similarity=0.260 Sum_probs=173.1
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.. +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 69 (255)
T PRK11300 5 LLSVSGLMMRF-------------GGLLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYK--PTGGTILLRGQHI 69 (255)
T ss_pred eEEEeeEEEEE-------------CCEEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcC--CCcceEEECCEEC
Confidence 36677776654 23579999999999999999999999999999999999876 4589999999875
Q ss_pred Ch---hc-ccceeEEeccCCCCCCCCCHHHHHHHHHHcCC---------------Cc----hHHHHHHHHHccccccccc
Q 045902 957 KQ---ET-FARISGYCEQNDIHSPNVTIYESLLYSAWLRL---------------PK----DMFVEEVMELVEMKALRNS 1013 (1472)
Q Consensus 957 ~~---~~-~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~---------------~~----~~~~~~v~~~l~l~~~~~~ 1013 (1472)
.. .. .+..++|++|++.+++.+||.||+.+...... .. ...++++++.+++.+..+.
T Consensus 70 ~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~ 149 (255)
T PRK11300 70 EGLPGHQIARMGVVRTFQHVRLFREMTVIENLLVAQHQQLKTGLFSGLLKTPAFRRAESEALDRAATWLERVGLLEHANR 149 (255)
T ss_pred CCCCHHHHHhcCeEEeccCcccCCCCcHHHHHHHhhhccccchhhhhhccccccccchhHHHHHHHHHHHhCChhhhhhC
Confidence 42 11 23358999999999999999999987532110 00 1245666777877665555
Q ss_pred ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCe
Q 045902 1014 LVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDE 1092 (1472)
Q Consensus 1014 ~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~ 1092 (1472)
.. ..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.||+
T Consensus 150 ~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~~-~~~~~~d~ 223 (255)
T PRK11300 150 QA-----GNLAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDMK-LVMGISDR 223 (255)
T ss_pred Ch-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCHH-HHHHhCCE
Confidence 43 479999999999999999999999999999999999999999999999875 899999999976 56788999
Q ss_pred EEEEecCcEEEEEcCCC
Q 045902 1093 LFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1093 v~~l~~gg~v~~~g~~~ 1109 (1472)
+++|++ |++++.|+.+
T Consensus 224 i~~l~~-g~i~~~~~~~ 239 (255)
T PRK11300 224 IYVVNQ-GTPLANGTPE 239 (255)
T ss_pred EEEEEC-CeEEecCCHH
Confidence 999985 7898888753
No 195
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-34 Score=339.09 Aligned_cols=215 Identities=22% Similarity=0.315 Sum_probs=173.2
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.++.. ......+|+|||++|++||++||+||||||||||+++|+|..++ .+|+|.++|.+..
T Consensus 3 i~~~~l~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p--~~G~i~~~g~~~~ 72 (305)
T PRK13651 3 IKVKNIVKIFNKK--------LPTELKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLP--DTGTIEWIFKDEK 72 (305)
T ss_pred EEEEEEEEEECCC--------CCccccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCC--CCcEEEEeceecc
Confidence 5677877765310 00113599999999999999999999999999999999998774 4799999986531
Q ss_pred ---------------------------hhcccceeEEeccCC-CCCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHc
Q 045902 958 ---------------------------QETFARISGYCEQND-IHSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELV 1005 (1472)
Q Consensus 958 ---------------------------~~~~~~~~gyv~Q~~-~~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l 1005 (1472)
....++.+||++|++ ..+...||+|++.|..... .+.+ ..++++++.+
T Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~ 152 (305)
T PRK13651 73 NKKKTKEKEKVLEKLVIQKTRFKKIKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVSKEEAKKRAAKYIELV 152 (305)
T ss_pred cccccccccccccccccccccccccchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCCHHHHHHHHHHHHHHc
Confidence 123456799999985 3344579999998865432 2222 3467778888
Q ss_pred ccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccH
Q 045902 1006 EMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSI 1084 (1472)
Q Consensus 1006 ~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~ 1084 (1472)
++. ++.++. +..||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++
T Consensus 153 gL~~~~~~~~-----~~~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivtHd~~- 226 (305)
T PRK13651 153 GLDESYLQRS-----PFELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNKQGKTIILVTHDLD- 226 (305)
T ss_pred CCChhhhhCC-----hhhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeeCHH-
Confidence 885 455544 3479999999999999999999999999999999999999999999999877999999999976
Q ss_pred HHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1085 DIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1085 ~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
++.+.+|++++|++ |++++.|+..
T Consensus 227 ~~~~~adrv~vl~~-G~i~~~g~~~ 250 (305)
T PRK13651 227 NVLEWTKRTIFFKD-GKIIKDGDTY 250 (305)
T ss_pred HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 47788999999985 7899998853
No 196
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=8.9e-35 Score=333.44 Aligned_cols=209 Identities=22% Similarity=0.281 Sum_probs=172.6
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 6 l~~~~l~~~~~-------------~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~ 70 (257)
T PRK10619 6 LNVIDLHKRYG-------------EHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSEGSIVVNGQTIN 70 (257)
T ss_pred EEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcc
Confidence 56777766542 3569999999999999999999999999999999999876 35899999998653
Q ss_pred h----------------hcccceeEEeccCCCCCCCCCHHHHHHHHHH-cC-CCc---hHHHHHHHHHccccccc-cccc
Q 045902 958 Q----------------ETFARISGYCEQNDIHSPNVTIYESLLYSAW-LR-LPK---DMFVEEVMELVEMKALR-NSLV 1015 (1472)
Q Consensus 958 ~----------------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~-l~-~~~---~~~~~~v~~~l~l~~~~-~~~~ 1015 (1472)
. ..+++.++|++|++.+++.+|++||+.+... .. ... ...++++++.+++.+.. +..
T Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~sv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~- 149 (257)
T PRK10619 71 LVRDKDGQLKVADKNQLRLLRTRLTMVFQHFNLWSHMTVLENVMEAPIQVLGLSKQEARERAVKYLAKVGIDERAQGKY- 149 (257)
T ss_pred cccccccccccccchHHHHHhhceEEEecCcccCCCCcHHHHHHHHHHHhCCCCHHHHHHHHHHHHHHcCCChhhhhCC-
Confidence 1 2345678999999999999999999987432 21 121 13456777888776542 332
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEE
Q 045902 1016 GLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL 1095 (1472)
Q Consensus 1016 ~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~ 1095 (1472)
+..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++
T Consensus 150 ----~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsH~~~-~~~~~~d~i~~ 224 (257)
T PRK10619 150 ----PVHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMG-FARHVSSHVIF 224 (257)
T ss_pred ----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEE
Confidence 3579999999999999999999999999999999999999999999999877999999999976 46668999999
Q ss_pred EecCcEEEEEcCC
Q 045902 1096 MKRGGHVIYAGPL 1108 (1472)
Q Consensus 1096 l~~gg~v~~~g~~ 1108 (1472)
|++ |++++.|+.
T Consensus 225 l~~-G~i~~~~~~ 236 (257)
T PRK10619 225 LHQ-GKIEEEGAP 236 (257)
T ss_pred EEC-CEEEEeCCH
Confidence 986 788888874
No 197
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=336.46 Aligned_cols=212 Identities=27% Similarity=0.412 Sum_probs=175.8
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+. +++.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 5 ~l~~~~l~~~~~------------~~~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~--p~~G~i~i~g~~~ 70 (283)
T PRK13636 5 ILKVEELNYNYS------------DGTHALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILK--PSSGRILFDGKPI 70 (283)
T ss_pred eEEEEeEEEEeC------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCccEEEECCEEC
Confidence 467888877652 12469999999999999999999999999999999999876 4589999999876
Q ss_pred C-----hhcccceeEEeccCCC-CCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHH
Q 045902 957 K-----QETFARISGYCEQNDI-HSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 957 ~-----~~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgG 1026 (1472)
. ...+++.+||++|++. .+...|++|++.+..... .+.. ..++++++.+++.+..++.. ..||||
T Consensus 71 ~~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G 145 (283)
T PRK13636 71 DYSRKGLMKLRESVGMVFQDPDNQLFSASVYQDVSFGAVNLKLPEDEVRKRVDNALKRTGIEHLKDKPT-----HCLSFG 145 (283)
T ss_pred CCCcchHHHHHhhEEEEecCcchhhccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhhhhCCc-----ccCCHH
Confidence 3 1235567999999974 334679999998764432 2222 34677888888887766553 479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
||||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++ ++.+.||++++|++ |++++.
T Consensus 146 ~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~~-~~~~~~dri~~l~~-G~i~~~ 223 (283)
T PRK13636 146 QKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDID-IVPLYCDNVFVMKE-GRVILQ 223 (283)
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999875 899999999976 36678999999986 789999
Q ss_pred cCCC
Q 045902 1106 GPLG 1109 (1472)
Q Consensus 1106 g~~~ 1109 (1472)
|+..
T Consensus 224 g~~~ 227 (283)
T PRK13636 224 GNPK 227 (283)
T ss_pred CCHH
Confidence 9863
No 198
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=2.6e-34 Score=338.74 Aligned_cols=209 Identities=22% Similarity=0.278 Sum_probs=172.3
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCC--
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHD-- 256 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d-- 256 (1472)
...+|+|||+.|++||+++|+|+||||||||+++|+|.++++ +|+|.++|+++.+... ++.++||+|++
T Consensus 33 ~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p~---~G~I~~~G~~i~~~~~~~~~~~r~~i~~v~Q~~~~ 109 (331)
T PRK15079 33 TLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKAT---DGEVAWLGKDLLGMKDDEWRAVRSDIQMIFQDPLA 109 (331)
T ss_pred ceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCCC---CcEEEECCEECCcCCHHHHHHHhCceEEEecCchh
Confidence 357999999999999999999999999999999999999887 8999999999876532 35799999997
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-ccccc
Q 045902 257 LHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADI 335 (1472)
Q Consensus 257 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 335 (1472)
.++|.+||.||+.+..+....+ ..+.+ . ...++.+++.+||. ...++
T Consensus 110 ~l~p~~tv~~~i~~~l~~~~~~--------~~~~~----------~--------------~~~~~~~l~~vgl~~~~~~~ 157 (331)
T PRK15079 110 SLNPRMTIGEIIAEPLRTYHPK--------LSRQE----------V--------------KDRVKAMMLKVGLLPNLINR 157 (331)
T ss_pred hcCCCCCHHHHHHHHHHHhccC--------CCHHH----------H--------------HHHHHHHHHHcCCChHHhcC
Confidence 5888999999998764321100 00000 0 01134578889994 34555
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
.+ ..|||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+..+.|+|++.|+ ...+.+++|+
T Consensus 158 ~p-----~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHd-l~~~~~~~dr 231 (331)
T PRK15079 158 YP-----HEFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHD-LAVVKHISDR 231 (331)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhCCE
Confidence 44 45999999999999999999999999999999999999999999999987668888887765 4577789999
Q ss_pred EEEecCCeEEEecChhHHH
Q 045902 416 IILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~ 434 (1472)
|++|++|++++.|+.+++.
T Consensus 232 i~vl~~G~ive~g~~~~i~ 250 (331)
T PRK15079 232 VLVMYLGHAVELGTYDEVY 250 (331)
T ss_pred EEEEECCEEEEEcCHHHHH
Confidence 9999999999999988774
No 199
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=1.1e-34 Score=330.88 Aligned_cols=197 Identities=27% Similarity=0.357 Sum_probs=164.1
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCccCCh-----hcccceeEEeccCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISGYPKKQ-----ETFARISGYCEQNDIH 974 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G~~~~~-----~~~~~~~gyv~Q~~~~ 974 (1472)
..+|+|+|++|++||+++|+|+||||||||+++|+|..++. ..+|+|.++|.+... ...++.++|++|++.+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 93 (247)
T TIGR00972 14 KEALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNP 93 (247)
T ss_pred eeeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCccc
Confidence 46999999999999999999999999999999999987632 128999999987642 2345679999999988
Q ss_pred CCCCCHHHHHHHHHHcCC--Cch---HHHHHHHHHcccc----cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCcc
Q 045902 975 SPNVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMK----ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIF 1045 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~----~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~ 1045 (1472)
++ .|+.||+.+....+. +.+ ..++++++.+++. +..+.. +..||||||||++||++|+.+|++|+
T Consensus 94 ~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~-----~~~LSgG~~qrv~laral~~~p~lll 167 (247)
T TIGR00972 94 FP-MSIYDNIAYGPRLHGIKDKKELDEIVEESLKKAALWDEVKDRLHDS-----ALGLSGGQQQRLCIARALAVEPEVLL 167 (247)
T ss_pred CC-CCHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCcchhhHhhCC-----cccCCHHHHHHHHHHHHHhcCCCEEE
Confidence 88 999999988654432 111 3456677777776 333332 35799999999999999999999999
Q ss_pred ccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1046 MDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1046 LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|||||+|||+.++..+++.|+++++ ++|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 168 lDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 227 (247)
T TIGR00972 168 LDEPTSALDPIATGKIEELIQELKK-KYTIVIVTHNMQ-QAARISDRTAFFYD-GELVEYGPT 227 (247)
T ss_pred EeCCcccCCHHHHHHHHHHHHHHHh-cCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999999976 489999999976 46788999999986 788888875
No 200
>PRK13643 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-34 Score=336.57 Aligned_cols=214 Identities=27% Similarity=0.403 Sum_probs=172.8
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 2 i~~~~v~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~v~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 71 (288)
T PRK13643 2 IKFEKVNYTYQPN--------SPFASRALFDIDLEVKKGSYTALIGHTGSGKSTLLQHLNGLLQ--PTEGKVTVGDIVVS 71 (288)
T ss_pred EEEEEEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCChHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 4577777765310 0011359999999999999999999999999999999999876 45899999998863
Q ss_pred h-------hcccceeEEeccCC--CCCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccc-cccccccCCCCCCCC
Q 045902 958 Q-------ETFARISGYCEQND--IHSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMK-ALRNSLVGLPGVDGL 1023 (1472)
Q Consensus 958 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~~L 1023 (1472)
. ..+++.+||++|++ .++ ..||.|++.|..... .+.. ..++++++.+++. ++.++. +..|
T Consensus 72 ~~~~~~~~~~~~~~ig~v~q~~~~~l~-~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~~L 145 (288)
T PRK13643 72 STSKQKEIKPVRKKVGVVFQFPESQLF-EETVLKDVAFGPQNFGIPKEKAEKIAAEKLEMVGLADEFWEKS-----PFEL 145 (288)
T ss_pred cccccccHHHHHhhEEEEecCcchhcc-cchHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCChhhccCC-----cccC
Confidence 1 23466799999986 344 469999999875432 2222 3466778888874 344433 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |+++
T Consensus 146 SgGqkqrvaiA~aL~~~p~illLDEPt~gLD~~~~~~l~~~l~~l~~~g~til~vtHd~~-~~~~~~dri~~l~~-G~i~ 223 (288)
T PRK13643 146 SGGQMRRVAIAGILAMEPEVLVLDEPTAGLDPKARIEMMQLFESIHQSGQTVVLVTHLMD-DVADYADYVYLLEK-GHII 223 (288)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEE
Confidence 999999999999999999999999999999999999999999999877999999999976 46688999999985 7999
Q ss_pred EEcCCC
Q 045902 1104 YAGPLG 1109 (1472)
Q Consensus 1104 ~~g~~~ 1109 (1472)
+.|+..
T Consensus 224 ~~g~~~ 229 (288)
T PRK13643 224 SCGTPS 229 (288)
T ss_pred EECCHH
Confidence 999863
No 201
>cd03218 ABC_YhbG The ABC transporters belonging to the YhbG family are similar to members of the Mj1267_LivG family, which is involved in the transport of branched-chain amino acids. The genes yhbG and yhbN are located in a single operon and may function together in cell envelope during biogenesis. YhbG is the putative ATP-binding cassette component and YhbN is the putative periplasmic-binding protein. Depletion of each gene product leads to growth arrest, irreversible cell damage and loss of viability in E. coli. The YhbG homolog (NtrA) is essential in Rhizobium meliloti, a symbiotic nitrogen-fixing bacterium.
Probab=100.00 E-value=1.6e-34 Score=326.52 Aligned_cols=204 Identities=23% Similarity=0.356 Sum_probs=171.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (232)
T cd03218 13 RKVVNGVSLSVKQGEIVGLLGPNGAGKTTTFYMIVGLVKPD---SGKILLDGQDITKLPMHKRARLGIGYLPQEASIFRK 89 (232)
T ss_pred EEeeccceeEecCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccCCHhHHHhccEEEecCCcccccc
Confidence 46999999999999999999999999999999999999887 8999999998765432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.+.....+.. .. +. ...++.+++.+||++..++.+.
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~--- 132 (232)
T cd03218 90 LTVEENILAVLEIRGLS----------KK----------ER--------------EEKLEELLEEFHITHLRKSKAS--- 132 (232)
T ss_pred CcHHHHHHHHHHhcCCC----------HH----------HH--------------HHHHHHHHHHcCChhhhhCChh---
Confidence 99999998753221110 00 00 0123567888999887776665
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++. ++.+++|++++|++
T Consensus 133 --~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tii~~sH~~~-~~~~~~d~i~~l~~ 208 (232)
T cd03218 133 --SLSGGERRRVEIARALATNPKFLLLDEPFAGVDPIAVQDIQKIIKILKD-RGIGVLITDHNVR-ETLSITDRAYIIYE 208 (232)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCHH-HHHHhCCEEEEEEC
Confidence 4999999999999999999999999999999999999999999999876 5788888877654 78899999999999
Q ss_pred CeEEEecChhHH
Q 045902 422 GEIVYQGPREYV 433 (1472)
Q Consensus 422 G~iv~~G~~~~~ 433 (1472)
|++++.|+.+++
T Consensus 209 G~i~~~~~~~~~ 220 (232)
T cd03218 209 GKVLAEGTPEEI 220 (232)
T ss_pred CeEEEEeCHHHh
Confidence 999999998765
No 202
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-34 Score=340.28 Aligned_cols=214 Identities=23% Similarity=0.342 Sum_probs=173.4
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.++.. ......+|+|||++|++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 21 ~l~~~nl~~~y~~~--------~~~~~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~--p~~G~I~i~g~~~ 90 (320)
T PRK13631 21 ILRVKNLYCVFDEK--------QENELVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIK--SKYGTIQVGDIYI 90 (320)
T ss_pred eEEEEeEEEEeCCC--------CcccccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCEEc
Confidence 57888888776311 0012469999999999999999999999999999999999877 4589999999775
Q ss_pred Ch-------------------hcccceeEEeccCC--CCCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccc-cc
Q 045902 957 KQ-------------------ETFARISGYCEQND--IHSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMK-AL 1010 (1472)
Q Consensus 957 ~~-------------------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~-~~ 1010 (1472)
.. ...++.+|||+|++ .+++ .||+||+.|..... .+.+ ..++++++.+++. ++
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~ 169 (320)
T PRK13631 91 GDKKNNHELITNPYSKKIKNFKELRRRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVKKSEAKKLAKFYLNKMGLDDSY 169 (320)
T ss_pred ccccccccccccccccccchHHHHHhcEEEEEECchhcccc-chHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCChhH
Confidence 32 23467799999986 3454 59999998865322 2222 3456777888775 44
Q ss_pred cccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhh
Q 045902 1011 RNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAF 1090 (1472)
Q Consensus 1011 ~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~ 1090 (1472)
.++. +..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|+++.++|+|||++||+++ ++.+.+
T Consensus 170 ~~~~-----~~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~~g~TiiivtHd~~-~~~~~a 243 (320)
T PRK13631 170 LERS-----PFGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKANNKTVFVITHTME-HVLEVA 243 (320)
T ss_pred hcCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhC
Confidence 4433 3579999999999999999999999999999999999999999999999877999999999976 466889
Q ss_pred CeEEEEecCcEEEEEcCC
Q 045902 1091 DELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1091 D~v~~l~~gg~v~~~g~~ 1108 (1472)
|++++|++ |+++..|+.
T Consensus 244 dri~vl~~-G~i~~~g~~ 260 (320)
T PRK13631 244 DEVIVMDK-GKILKTGTP 260 (320)
T ss_pred CEEEEEEC-CEEEEeCCH
Confidence 99999985 789999975
No 203
>cd03233 ABC_PDR_domain1 The pleiotropic drug resistance (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide-binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.4e-34 Score=317.60 Aligned_cols=180 Identities=45% Similarity=0.763 Sum_probs=156.7
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC---CCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCC
Q 045902 184 RKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD---KSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLH 258 (1472)
Q Consensus 184 ~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~---~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~ 258 (1472)
.++.+|+|+|+.+++||+++|+||||||||||+++|+|.++ ++ +|+|.++|+++.... .++.++|++|++.+
T Consensus 18 ~~~~il~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~---~G~i~i~g~~~~~~~~~~~~~i~~~~q~~~~ 94 (202)
T cd03233 18 SKIPILKDFSGVVKPGEMVLVLGRPGSGCSTLLKALANRTEGNVSV---EGDIHYNGIPYKEFAEKYPGEIIYVSEEDVH 94 (202)
T ss_pred CCceeeeeEEEEECCCcEEEEECCCCCCHHHHHHHhcccCCCCCCc---ceEEEECCEECccchhhhcceEEEEeccccc
Confidence 34579999999999999999999999999999999999988 55 899999999876542 24579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
++.+||+||+.++.+.. .+
T Consensus 95 ~~~~tv~~~l~~~~~~~---------------------------------------------------------~~---- 113 (202)
T cd03233 95 FPTLTVRETLDFALRCK---------------------------------------------------------GN---- 113 (202)
T ss_pred CCCCcHHHHHhhhhhhc---------------------------------------------------------cc----
Confidence 99999999997743210 11
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
.....||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.||+.+++.+++|++++
T Consensus 114 -~~~~~LS~Ge~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~t~ii~~~h~~~~~~~~~d~i~~ 192 (202)
T cd03233 114 -EFVRGISGGERKRVSIAEALVSRASVLCWDNSTRGLDSSTALEILKCIRTMADVLKTTTFVSLYQASDEIYDLFDKVLV 192 (202)
T ss_pred -cchhhCCHHHHHHHHHHHHHhhCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEEcCCHHHHHHhCCeEEE
Confidence 2234599999999999999999999999999999999999999999999997655678888888887889999999999
Q ss_pred ecCCeEEEec
Q 045902 419 LSEGEIVYQG 428 (1472)
Q Consensus 419 L~~G~iv~~G 428 (1472)
|++|++++.|
T Consensus 193 l~~G~i~~~g 202 (202)
T cd03233 193 LYEGRQIYYG 202 (202)
T ss_pred EECCEEEecC
Confidence 9999998765
No 204
>COG2274 SunT ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain [Defense mechanisms]
Probab=100.00 E-value=2.4e-35 Score=372.53 Aligned_cols=212 Identities=28% Similarity=0.465 Sum_probs=178.3
Q ss_pred cceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcC
Q 045902 874 QPLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISG 953 (1472)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G 953 (1472)
-+..+.++|++|.+.. +...+|+|+|++|+|||.+||+|+||||||||+|+|+|+.+ +.+|+|.+||
T Consensus 468 ~~g~I~~~nvsf~y~~-----------~~~~vL~~isL~I~~Ge~vaIvG~SGsGKSTL~KLL~gly~--p~~G~I~~dg 534 (709)
T COG2274 468 LQGEIEFENVSFRYGP-----------DDPPVLEDLSLEIPPGEKVAIVGRSGSGKSTLLKLLLGLYK--PQQGRILLDG 534 (709)
T ss_pred cCceEEEEEEEEEeCC-----------CCcchhhceeEEeCCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECC
Confidence 3457899999998742 23469999999999999999999999999999999999988 4599999999
Q ss_pred ccCC---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCC---------CCC
Q 045902 954 YPKK---QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLP---------GVD 1021 (1472)
Q Consensus 954 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~---------~~~ 1021 (1472)
+++. ...+|+.+|||+|++.++. -|++||+.++. ++...|++++.+.+.++.+.+...| +..
T Consensus 535 ~dl~~i~~~~lR~~ig~V~Q~~~Lf~-gSI~eNi~l~~-----p~~~~e~i~~A~~~ag~~~fI~~lP~gy~t~v~E~G~ 608 (709)
T COG2274 535 VDLNDIDLASLRRQVGYVLQDPFLFS-GSIRENIALGN-----PEATDEEIIEAAQLAGAHEFIENLPMGYDTPVGEGGA 608 (709)
T ss_pred EeHHhcCHHHHHhheeEEcccchhhc-CcHHHHHhcCC-----CCCCHHHHHHHHHHhCcHHHHHhcccccccccccCCC
Confidence 9864 4678899999999998875 59999998643 2223456666666665554443222 345
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 045902 1022 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGH 1101 (1472)
Q Consensus 1022 ~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~ 1101 (1472)
+||||||||++|||||+++|+||+||||||+||+.+.+.|++.|.++. +|+|+|+++|+++ ..+.+|++++|++ |+
T Consensus 609 ~LSGGQrQrlalARaLl~~P~ILlLDEaTSaLD~~sE~~I~~~L~~~~-~~~T~I~IaHRl~--ti~~adrIiVl~~-Gk 684 (709)
T COG2274 609 NLSGGQRQRLALARALLSKPKILLLDEATSALDPETEAIILQNLLQIL-QGRTVIIIAHRLS--TIRSADRIIVLDQ-GK 684 (709)
T ss_pred CCCHHHHHHHHHHHHhccCCCEEEEeCcccccCHhHHHHHHHHHHHHh-cCCeEEEEEccch--HhhhccEEEEccC-Cc
Confidence 899999999999999999999999999999999999999999999985 4799999999975 7889999999985 89
Q ss_pred EEEEcCC
Q 045902 1102 VIYAGPL 1108 (1472)
Q Consensus 1102 v~~~g~~ 1108 (1472)
++..|+.
T Consensus 685 iv~~gs~ 691 (709)
T COG2274 685 IVEQGSH 691 (709)
T ss_pred eeccCCH
Confidence 9999985
No 205
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=331.34 Aligned_cols=198 Identities=28% Similarity=0.412 Sum_probs=166.9
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
+.+|+|+||+|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 92 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELS--PDSGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPFT 92 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCCC
Confidence 569999999999999999999999999999999999876 458999999987532 234467899999988888899
Q ss_pred HHHHHHHHHHcC-CCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHh------hCCCCccccCC
Q 045902 980 IYESLLYSAWLR-LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELV------ANPSIIFMDEP 1049 (1472)
Q Consensus 980 v~e~l~~~~~l~-~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~------~~p~il~LDEP 1049 (1472)
|+|++.+..... ... +..++++++.+++.+..++.+ ..||||||||++||++|+ .+|++|+||||
T Consensus 93 v~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGe~qrv~la~al~~~~~~~~~p~lllLDEP 167 (258)
T PRK13548 93 VEEVVAMGRAPHGLSRAEDDALVAAALAQVDLAHLAGRDY-----PQLSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEP 167 (258)
T ss_pred HHHHHHhhhcccCCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhcccccCCCCCEEEEeCC
Confidence 999998754322 111 234677888888876666553 479999999999999999 59999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHh-hCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1050 TSGLDARAAAIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1050 TsgLD~~~~~~i~~~l~~l~-~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
|+|||+.++..+.+.|++++ ++|+|||++||+++ ++.+.+|++++|.+ |+++..|+..
T Consensus 168 t~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 226 (258)
T PRK13548 168 TSALDLAHQHHVLRLARQLAHERGLAVIVVLHDLN-LAARYADRIVLLHQ-GRLVADGTPA 226 (258)
T ss_pred cccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhcCEEEEEEC-CEEEeeCCHH
Confidence 99999999999999999997 66899999999976 46678999999985 7888888753
No 206
>TIGR03522 GldA_ABC_ATP gliding motility-associated ABC transporter ATP-binding subunit GldA. Members of this protein family are exclusive to the Bacteroidetes phylum (previously Cytophaga-Flavobacteria-Bacteroides). GldA is an ABC transporter ATP-binding protein (pfam00005) linked to a type of rapid surface gliding motility found in certain Bacteroidetes, such as Flavobacterium johnsoniae and Cytophaga hutchinsonii. Knockouts of GldA abolish the gliding phenotype. Gliding motility appears closely linked to chitin utilization in the model species Flavobacterium johnsoniae. Bacteroidetes with members of this protein family appear to have all of the genes associated with gliding motility.
Probab=100.00 E-value=1.2e-34 Score=339.17 Aligned_cols=205 Identities=27% Similarity=0.430 Sum_probs=175.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 263 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~~~l~~is~~i~~Gei~~l~G~NGaGKTTLl~~l~Gl~~~~---~G~i~i~g~~~~~~~~~~~~~ig~~~q~~~l~~~~t 91 (301)
T TIGR03522 15 QNALDEVSFEAQKGRIVGFLGPNGAGKSTTMKIITGYLPPD---SGSVQVCGEDVLQNPKEVQRNIGYLPEHNPLYLDMY 91 (301)
T ss_pred EEEEEEeEEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccChHHHHhceEEecCCCCCCCCCc
Confidence 46999999999999999999999999999999999999987 999999999876532 1357999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|.||+.|.++..+... .+ . ....+.+++.+||++..|+.+++
T Consensus 92 v~e~l~~~~~~~~~~~----------~~----------~--------------~~~~~~~l~~~gl~~~~~~~~~~---- 133 (301)
T TIGR03522 92 VREYLQFIAGIYGMKG----------QL----------L--------------KQRVEEMIELVGLRPEQHKKIGQ---- 133 (301)
T ss_pred HHHHHHHHHHHcCCCH----------HH----------H--------------HHHHHHHHHHCCCchHhcCchhh----
Confidence 9999988655432110 00 0 00135678999999988877765
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||||||+||+||+++|++|+|||||+|||+.++.++.+.|+++++ +.|++++.|++ .++.+++|+|++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~lliLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiii~sH~l-~~~~~~~d~i~~l~~G~ 209 (301)
T TIGR03522 134 -LSKGYRQRVGLAQALIHDPKVLILDEPTTGLDPNQLVEIRNVIKNIGK--DKTIILSTHIM-QEVEAICDRVIIINKGK 209 (301)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHhcC--CCEEEEEcCCH-HHHHHhCCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999853 58888887665 47889999999999999
Q ss_pred EEEecChhHHHH
Q 045902 424 IVYQGPREYVLD 435 (1472)
Q Consensus 424 iv~~G~~~~~~~ 435 (1472)
+++.|+.+++..
T Consensus 210 i~~~g~~~~~~~ 221 (301)
T TIGR03522 210 IVADKKLDELSA 221 (301)
T ss_pred EEEeCCHHHHHH
Confidence 999999998754
No 207
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.4e-34 Score=316.83 Aligned_cols=189 Identities=58% Similarity=0.951 Sum_probs=159.5
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.++.. ..++.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~~~~---------~~~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~G~i~~~g~~~~ 74 (192)
T cd03232 4 LTWKNLNYTVPVK---------GGKRQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVITGEILINGRPLD 74 (192)
T ss_pred EEEeeeEEEecCC---------CCceEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCcceEEEECCEehH
Confidence 5677776665210 0124699999999999999999999999999999999997532246899999998765
Q ss_pred hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHH
Q 045902 958 QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVEL 1037 (1472)
Q Consensus 958 ~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL 1037 (1472)
..+++.++|++|++.+++.+|++||+.+...++ .||||||||++||+||
T Consensus 75 -~~~~~~i~~~~q~~~~~~~~tv~~~l~~~~~~~------------------------------~LSgGe~qrv~la~al 123 (192)
T cd03232 75 -KNFQRSTGYVEQQDVHSPNLTVREALRFSALLR------------------------------GLSVEQRKRLTIGVEL 123 (192)
T ss_pred -HHhhhceEEecccCccccCCcHHHHHHHHHHHh------------------------------cCCHHHhHHHHHHHHH
Confidence 344567899999998999999999998743210 4999999999999999
Q ss_pred hhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1038 VANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1038 ~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
+.+|++|+|||||+|||+.++..+++.|+++++.|+|||++||+++.++.+.+|++++|+++|++++.|
T Consensus 124 ~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~tiiivtH~~~~~~~~~~d~i~~l~~~g~i~~~g 192 (192)
T cd03232 124 AAKPSILFLDEPTSGLDSQAAYNIVRFLKKLADSGQAILCTIHQPSASIFEKFDRLLLLKRGGKTVYFG 192 (192)
T ss_pred hcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHHcCCEEEEEEcCChHHHHhhCCEEEEEcCCCeEEeCC
Confidence 999999999999999999999999999999987799999999998644678899999998647888765
No 208
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-34 Score=327.97 Aligned_cols=213 Identities=28% Similarity=0.389 Sum_probs=172.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+++|+|+|+++++|++++|+||||||||||+++|+|.++++ +|+|.++|+++....+ ++.++|++|++.++
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 90 (241)
T cd03256 14 KKALKDVSLSINPGEFVALIGPSGAGKSTLLRCLNGLVEPT---SGSVLIDGTDINKLKGKALRQLRRQIGMIFQQFNLI 90 (241)
T ss_pred cEEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEeccccCHhHHHHHHhccEEEcccCccc
Confidence 46999999999999999999999999999999999999887 8999999998765431 35799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||+||+.+....... ... .. .+..++.. ...++.+++.+||++..++.++
T Consensus 91 ~~~tv~~~l~~~~~~~~~--~~~---~~------~~~~~~~~---------------~~~~~~~l~~~~l~~~~~~~~~- 143 (241)
T cd03256 91 ERLSVLENVLSGRLGRRS--TWR---SL------FGLFPKEE---------------KQRALAALERVGLLDKAYQRAD- 143 (241)
T ss_pred ccCcHHHHHHhhhcccch--hhh---hh------cccCcHHH---------------HHHHHHHHHHcCChhhhCCCcc-
Confidence 999999999875321100 000 00 00000000 0113457888999877776554
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..++|+|++.|++. ++.+++|++++|
T Consensus 144 ----~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~~~~~d~v~~l 218 (241)
T cd03256 144 ----QLSGGQQQRVAIARALMQQPKLILADEPVASLDPASSRQVMDLLKRINREEGITVIVSLHQVD-LAREYADRIVGL 218 (241)
T ss_pred ----cCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 599999999999999999999999999999999999999999999997656788888887654 677899999999
Q ss_pred cCCeEEEecChhHH
Q 045902 420 SEGEIVYQGPREYV 433 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~ 433 (1472)
++|++++.|+.+++
T Consensus 219 ~~G~i~~~~~~~~~ 232 (241)
T cd03256 219 KDGRIVFDGPPAEL 232 (241)
T ss_pred ECCEEEeecCHHHh
Confidence 99999999998775
No 209
>cd03266 ABC_NatA_sodium_exporter NatA is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilus, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of a single ATP-binding protein and a single intergral membrane protein.
Probab=100.00 E-value=2e-34 Score=322.53 Aligned_cols=198 Identities=30% Similarity=0.447 Sum_probs=166.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCCCH
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 264 (1472)
++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 19 ~il~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 95 (218)
T cd03266 19 QAVDGVSFTVKPGEVTGLLGPNGAGKTTTLRMLAGLLEPD---AGFATVDGFDVVKEPAEARRRLGFVSDSTGLYDRLTA 95 (218)
T ss_pred eeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CceEEECCEEcccCHHHHHhhEEEecCCcccCcCCCH
Confidence 6999999999999999999999999999999999999887 899999999876421 13579999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.+.....+.. ..+ . ...++.+++.+||++..++.+++
T Consensus 96 ~e~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~----- 136 (218)
T cd03266 96 RENLEYFAGLYGLK----------GDE----------L--------------TARLEELADRLGMEELLDRRVGG----- 136 (218)
T ss_pred HHHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHHcCCHHHHhhhhhh-----
Confidence 99998754322110 000 0 01235578889998877776654
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++.+ .+.|+|++.|++ .++.+++|++++|++|++
T Consensus 137 LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~-~~~~~~~d~i~~l~~G~i 214 (218)
T cd03266 137 FSTGMRQKVAIARALVHDPPVLLLDEPTTGLDVMATRALREFIRQLRA-LGKCILFSTHIM-QEVERLCDRVVVLHRGRV 214 (218)
T ss_pred cCHHHHHHHHHHHHHhcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999865 478988888765 477889999999999999
Q ss_pred EEec
Q 045902 425 VYQG 428 (1472)
Q Consensus 425 v~~G 428 (1472)
++.|
T Consensus 215 ~~~~ 218 (218)
T cd03266 215 VYEG 218 (218)
T ss_pred eecC
Confidence 8764
No 210
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=1.5e-34 Score=324.18 Aligned_cols=191 Identities=26% Similarity=0.385 Sum_probs=159.7
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hc---cc-ceeEEeccCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ET---FA-RISGYCEQNDIHS 975 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~---~~-~~~gyv~Q~~~~~ 975 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... .. ++ +.++|++|++.++
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 95 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDN--PTSGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHLL 95 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhhhcCHhHHHHHHHhcEEEEecccccC
Confidence 469999999999999999999999999999999999876 458999999987532 11 22 5689999999888
Q ss_pred CCCCHHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 045902 976 PNVTIYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1051 (1472)
Q Consensus 976 ~~lTv~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTs 1051 (1472)
+.+|++|++.+....+. +. ...+.++++.+++.+..++.. ..||||||||++||++|+.+|++|+|||||+
T Consensus 96 ~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~illlDEPt~ 170 (221)
T TIGR02211 96 PDFTALENVAMPLLIGKKSVKEAKERAYEMLEKVGLEHRINHRP-----SELSGGERQRVAIARALVNQPSLVLADEPTG 170 (221)
T ss_pred CCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhCCCCEEEEeCCCC
Confidence 89999999988654332 21 134567788888876655543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1052 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
|||+.++..+.+.|++++++ |+|||++||+++ ..+.+|++++|++ |+++
T Consensus 171 ~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~--~~~~~d~v~~l~~-G~i~ 220 (221)
T TIGR02211 171 NLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE--LAKKLDRVLEMKD-GQLF 220 (221)
T ss_pred cCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEEEeC-CEec
Confidence 99999999999999999764 899999999976 3356899999986 5654
No 211
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-34 Score=336.16 Aligned_cols=197 Identities=24% Similarity=0.318 Sum_probs=165.1
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeEEeccCCC-C
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-------ETFARISGYCEQNDI-H 974 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-------~~~~~~~gyv~Q~~~-~ 974 (1472)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++. .
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~~ 97 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLK--PSSGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEAQ 97 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECccccccchHHHHHhceEEEEeChhhh
Confidence 469999999999999999999999999999999999877 458999999987532 234567899999963 3
Q ss_pred CCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 045902 975 SPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEP 1049 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEP 1049 (1472)
+..+||.|++.+...... ..+ ..++++++.+++. ...++.. ..||||||||++||++|+.+|++|+||||
T Consensus 98 ~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~~-----~~LSgGq~qrl~laral~~~p~lLlLDEP 172 (287)
T PRK13641 98 LFENTVLKDVEFGPKNFGFSEDEAKEKALKWLKKVGLSEDLISKSP-----FELSGGQMRRVAIAGVMAYEPEILCLDEP 172 (287)
T ss_pred hccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECC
Confidence 335899999987654321 111 3467788888885 4555543 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1050 TSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1050 TsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+|||+.++..+.+.|++++++|.|||++||+++ ++.+.||++++|++ |+++..|+.
T Consensus 173 t~gLD~~~~~~l~~~l~~l~~~g~tvlivsH~~~-~~~~~~d~v~~l~~-G~i~~~g~~ 229 (287)
T PRK13641 173 AAGLDPEGRKEMMQLFKDYQKAGHTVILVTHNMD-DVAEYADDVLVLEH-GKLIKHASP 229 (287)
T ss_pred CCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999999877999999999976 47788999999985 789888875
No 212
>cd03224 ABC_TM1139_LivF_branched LivF (TM1139) is part of the LIV-I bacterial ABC-type two-component transport system that imports neutral, branched-chain amino acids. The E. coli branched-chain amino acid transporter comprises a heterodimer of ABC transporters (LivF and LivG), a heterodimer of six-helix TM domains (LivM and LivH), and one of two alternative soluble periplasmic substrate binding proteins (LivK or LivJ). ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules.
Probab=100.00 E-value=1.7e-34 Score=324.03 Aligned_cols=203 Identities=26% Similarity=0.398 Sum_probs=167.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|+++....+ ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (222)
T cd03224 13 SQILFGVSLTVPEGEIVALLGRNGAGKTTLLKTIMGLLPPR---SGSIRFDGRDITGLPPHERARAGIGYVPEGRRIFPE 89 (222)
T ss_pred eeEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCCCCHHHHHhcCeEEeccccccCCC
Confidence 36999999999999999999999999999999999999987 8999999998765432 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHh-CCcccccccccCc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKIL-GLDICADIMVGNE 340 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~vg~~ 340 (1472)
+||+||+.+....... . + .. ...+.+++.+ ++++..|+.+.
T Consensus 90 ~t~~~~l~~~~~~~~~---~----~--~~---------------------------~~~~~~l~~~~~l~~~~~~~~~-- 131 (222)
T cd03224 90 LTVEENLLLGAYARRR---A----K--RK---------------------------ARLERVYELFPRLKERRKQLAG-- 131 (222)
T ss_pred CcHHHHHHHHhhhcCc---h----h--HH---------------------------HHHHHHHHHHHhhhhhhhCchh--
Confidence 9999999886432110 0 0 00 0123345556 46655665554
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|+
T Consensus 132 ---~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l~ 206 (222)
T cd03224 132 ---TLSGGEQQMLAIARALMSRPKLLLLDEPSEGLAPKIVEEIFEAIRELRD-EGVTILLVEQNA-RFALEIADRAYVLE 206 (222)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhccEEEEee
Confidence 4999999999999999999999999999999999999999999999876 578888887765 46778999999999
Q ss_pred CCeEEEecChhHHH
Q 045902 421 EGEIVYQGPREYVL 434 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~ 434 (1472)
+|++++.|+.+++.
T Consensus 207 ~G~i~~~~~~~~~~ 220 (222)
T cd03224 207 RGRVVLEGTAAELL 220 (222)
T ss_pred CCeEEEeCCHHHHh
Confidence 99999999987653
No 213
>KOG0055 consensus Multidrug/pheromone exporter, ABC superfamily [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.1e-35 Score=372.40 Aligned_cols=211 Identities=26% Similarity=0.389 Sum_probs=182.5
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCC
Q 045902 183 KRKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHH 259 (1472)
Q Consensus 183 ~~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 259 (1472)
+...+||+|+|+.+++|+.+||+|||||||||.+.+|-..++|. +|.|.+||+++++++. |+++|.|+|+|.+|
T Consensus 1000 RP~~~Il~~l~l~i~~GqTvALVG~SGsGKSTvI~LLeRfYdp~---~G~V~IDg~dik~lnl~~LR~~i~lVsQEP~LF 1076 (1228)
T KOG0055|consen 1000 RPDVPVLNNLSLSIRAGQTVALVGPSGSGKSTVISLLERFYDPD---AGKVKIDGVDIKDLNLKWLRKQIGLVSQEPVLF 1076 (1228)
T ss_pred CCCchhhcCCcEEecCCCEEEEECCCCCCHHHHHHHHHHhcCCC---CCeEEECCcccccCCHHHHHHhcceeccCchhh
Confidence 34568999999999999999999999999999999999999998 9999999999998875 47899999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
. .|+||||.|+... . +..++.++.|++.++++ +.+|++..||.||
T Consensus 1077 ~-~TIrENI~YG~~~--v--------------------s~~eIi~Aak~ANaH~F-----------I~sLP~GyDT~vG- 1121 (1228)
T KOG0055|consen 1077 N-GTIRENIAYGSEE--V--------------------SEEEIIEAAKLANAHNF-----------ISSLPQGYDTRVG- 1121 (1228)
T ss_pred c-ccHHHHHhccCCC--C--------------------CHHHHHHHHHHhhhHHH-----------HhcCcCcccCccC-
Confidence 6 5999999997210 0 12344455555554433 3578999999999
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
+++..||||||||++||||+++||+||||||.||+||+.+.+.+.++|.+.. .|+|.|+.-|.. .+.+.+|.|+|+
T Consensus 1122 erG~QLSGGQKQRIAIARAilRnPkILLLDEATSALDseSErvVQeALd~a~--~gRT~IvIAHRL--STIqnaD~I~Vi 1197 (1228)
T KOG0055|consen 1122 ERGVQLSGGQKQRIAIARAILRNPKILLLDEATSALDSESERVVQEALDRAM--EGRTTIVIAHRL--STIQNADVIAVL 1197 (1228)
T ss_pred cccCcCCchHHHHHHHHHHHHcCCCeeeeeccchhhhhhhHHHHHHHHHHhh--cCCcEEEEecch--hhhhcCCEEEEE
Confidence 5777899999999999999999999999999999999999999999999976 467777777765 588999999999
Q ss_pred cCCeEEEecChhHHHH
Q 045902 420 SEGEIVYQGPREYVLD 435 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~~ 435 (1472)
++|+|+++|++++++.
T Consensus 1198 ~~G~VvE~GtH~~L~~ 1213 (1228)
T KOG0055|consen 1198 KNGKVVEQGTHDELLA 1213 (1228)
T ss_pred ECCEEEecccHHHHHh
Confidence 9999999999999975
No 214
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=345.36 Aligned_cols=206 Identities=22% Similarity=0.292 Sum_probs=175.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 258 (1472)
..+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++.+
T Consensus 41 ~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~p~---sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 41 SLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIEPT---RGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred eEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCC---CCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 45899999999999999999999999999999999999987 8999999999875432 2479999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
++.+||+||+.|..+..+... .+. ...++.+++.+||++..++.+.
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~----------~~~------------------------~~~~~e~L~~~gL~~~~~~~~~ 163 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINA----------EER------------------------REKALDALRQVGLENYAHSYPD 163 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCH----------HHH------------------------HHHHHHHHHHcCCChhhhcCcc
Confidence 999999999998754332110 000 0013557889999887776665
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
.|||||||||+|||||+.+|++|||||||+|||+.++.++.+.|+++.+..++|+|++.|++ .++.+++|+|++
T Consensus 164 -----~LSgGq~QRv~LArAL~~~P~iLLLDEPts~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~-~~~~~~~Dri~v 237 (400)
T PRK10070 164 -----ELSGGMRQRVGLARALAINPDILLMDEAFSALDPLIRTEMQDELVKLQAKHQRTIVFISHDL-DEAMRIGDRIAI 237 (400)
T ss_pred -----cCCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCH-HHHHHhCCEEEE
Confidence 49999999999999999999999999999999999999999999998765688988887765 477889999999
Q ss_pred ecCCeEEEecChhHHH
Q 045902 419 LSEGEIVYQGPREYVL 434 (1472)
Q Consensus 419 L~~G~iv~~G~~~~~~ 434 (1472)
|++|++++.|+++++.
T Consensus 238 L~~G~i~~~g~~~~l~ 253 (400)
T PRK10070 238 MQNGEVVQVGTPDEIL 253 (400)
T ss_pred EECCEEEecCCHHHHH
Confidence 9999999999988764
No 215
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2e-34 Score=327.67 Aligned_cols=209 Identities=26% Similarity=0.378 Sum_probs=172.2
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 3 l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 67 (242)
T PRK11124 3 IQLNGINCFY-------------GAHQALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEM--PRSGTLNIAGNHFD 67 (242)
T ss_pred EEEEeeEEEE-------------CCeeeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEecc
Confidence 5566766544 23469999999999999999999999999999999999876 45899999998642
Q ss_pred ---------hhcccceeEEeccCCCCCCCCCHHHHHHHH-HHcC-CCc---hHHHHHHHHHcccccccccccCCCCCCCC
Q 045902 958 ---------QETFARISGYCEQNDIHSPNVTIYESLLYS-AWLR-LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGL 1023 (1472)
Q Consensus 958 ---------~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~-~~l~-~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~L 1023 (1472)
....++.++|++|++.+++.+|+.||+.+. .... ... ...++++++.+++.+..+... ..|
T Consensus 68 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~i~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~L 142 (242)
T PRK11124 68 FSKTPSDKAIRELRRNVGMVFQQYNLWPHLTVQQNLIEAPCRVLGLSKDQALARAEKLLERLRLKPYADRFP-----LHL 142 (242)
T ss_pred cccccchhhHHHHHhheEEEecCccccCCCcHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhC
Confidence 122356789999999999999999999642 2222 121 134567778888876666543 479
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|.+ |+++
T Consensus 143 S~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~-~~~~~~d~i~~l~~-g~i~ 220 (242)
T PRK11124 143 SGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAETGITQVIVTHEVE-VARKTASRVVYMEN-GHIV 220 (242)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEE
Confidence 999999999999999999999999999999999999999999999877999999999976 46678999999985 7888
Q ss_pred EEcCC
Q 045902 1104 YAGPL 1108 (1472)
Q Consensus 1104 ~~g~~ 1108 (1472)
+.|+.
T Consensus 221 ~~~~~ 225 (242)
T PRK11124 221 EQGDA 225 (242)
T ss_pred EeCCH
Confidence 88875
No 216
>cd03257 ABC_NikE_OppD_transporters The ABC transporter subfamily specific for the transport of dipeptides, oligopeptides (OppD), and nickel (NikDE). The NikABCDE system of E. coli belongs to this family and is composed of the periplasmic binding protein NikA, two integral membrane components (NikB and NikC), and two ATPase (NikD and NikE). The NikABCDE transporter is synthesized under anaerobic conditions to meet the increased demand for nickel resulting from hydrogenase synthesis. The molecular mechanism of nickel uptake in many bacteria and most archaea is not known. Many other members of this ABC family are also involved in the uptake of dipeptides and oligopeptides. The oligopeptide transport system (Opp) is a five-component ABC transport composed of a membrane-anchored substrate binding proteins (SRP), OppA, two transmembrane proteins, OppB and OppC, and two ATP-binding domains, OppD and OppF.
Probab=100.00 E-value=4.1e-34 Score=322.27 Aligned_cols=201 Identities=25% Similarity=0.333 Sum_probs=163.5
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC------CCceEEEEcCCC--CC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV------PQRTCAYISQHD--LH 258 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~------~~~~~~yv~Q~d--~~ 258 (1472)
++|+|+|+++++||+++|+|||||||||||++|+|.++++ +|+|.++|+++.... .++.++|++|++ .+
T Consensus 19 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (228)
T cd03257 19 KALDDVSFSIKKGETLGLVGESGSGKSTLARAILGLLKPT---SGSIIFDGKDLLKLSRRLRKIRRKEIQMVFQDPMSSL 95 (228)
T ss_pred eeecCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccchhhHHHhhccEEEEecCchhhc
Confidence 6999999999999999999999999999999999999887 899999999886543 135799999998 46
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-ccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADIMV 337 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~v 337 (1472)
++.+||+||+.+.....+.... .+ ..+ ...+.+++.+||. ...+..+
T Consensus 96 ~~~~tv~~nl~~~~~~~~~~~~---------~~---------~~~--------------~~~~~~l~~~~l~~~~~~~~~ 143 (228)
T cd03257 96 NPRMTIGEQIAEPLRIHGKLSK---------KE---------ARK--------------EAVLLLLVGVGLPEEVLNRYP 143 (228)
T ss_pred CCcCCHHHHHHHHHHhccCCcH---------HH---------HHH--------------HHHHHHHHHCCCChhHhhCCc
Confidence 6789999999875432211000 00 000 0013467788885 4556555
Q ss_pred cCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEE
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDII 417 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ii 417 (1472)
+ .|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++.+++|+++
T Consensus 144 ~-----~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~ 217 (228)
T cd03257 144 H-----ELSGGQRQRVAIARALALNPKLLIADEPTSALDVSVQAQILDLLKKLQEELGLTLLFITHDLG-VVAKIADRVA 217 (228)
T ss_pred h-----hcCHHHHHHHHHHHHHhcCCCEEEecCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEE
Confidence 4 499999999999999999999999999999999999999999999998755789998887764 6677999999
Q ss_pred EecCCeEEEec
Q 045902 418 LLSEGEIVYQG 428 (1472)
Q Consensus 418 lL~~G~iv~~G 428 (1472)
+|++|+++..|
T Consensus 218 ~l~~G~i~~~g 228 (228)
T cd03257 218 VMYAGKIVEEG 228 (228)
T ss_pred EEeCCEEEecC
Confidence 99999998765
No 217
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.3e-34 Score=322.46 Aligned_cols=190 Identities=25% Similarity=0.345 Sum_probs=160.4
Q ss_pred cceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHHHHHHH
Q 045902 908 DVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIYESLLY 986 (1472)
Q Consensus 908 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~l~~ 986 (1472)
|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|++||+.+
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~ 93 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFET--PQSGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVGL 93 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHhc
Confidence 9999999999999999999999999999999876 458999999987643 1234678999999999999999999987
Q ss_pred HHHcCCC----chHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHH
Q 045902 987 SAWLRLP----KDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1062 (1472)
Q Consensus 987 ~~~l~~~----~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~ 1062 (1472)
....+.. .+..++++++.+++.+..++.. ..||||||||++||++|+.+|++|+|||||+|||+.++..++
T Consensus 94 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~ 168 (211)
T cd03298 94 GLSPGLKLTAEDRQAIEVALARVGLAGLEKRLP-----GELSGGERQRVALARVLVRDKPVLLLDEPFAALDPALRAEML 168 (211)
T ss_pred ccccccCccHHHHHHHHHHHHHcCCHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHH
Confidence 5432211 1235677888888877666543 479999999999999999999999999999999999999999
Q ss_pred HHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1063 RTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1063 ~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 169 ~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~ 211 (211)
T cd03298 169 DLVLDLHAETKMTVLMVTHQPE-DAKRLAQRVVFLDN-GRIAAQG 211 (211)
T ss_pred HHHHHHHHhcCCEEEEEecCHH-HHHhhhCEEEEEEC-CEEeecC
Confidence 999999754 899999999976 46678999999985 6776543
No 218
>TIGR02315 ABC_phnC phosphonate ABC transporter, ATP-binding protein. Phosphonates are a class of phosphorus-containing organic compound with a stable direct C-P bond rather than a C-O-P linkage. A number of bacterial species have operons, typically about 14 genes in size, with genes for ATP-dependent transport of phosphonates, degradation, and regulation of the expression of the system. Members of this protein family are the ATP-binding cassette component of tripartite ABC transporters of phosphonates.
Probab=100.00 E-value=1.5e-34 Score=328.97 Aligned_cols=213 Identities=25% Similarity=0.360 Sum_probs=171.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+++|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|++.++
T Consensus 15 ~~il~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 91 (243)
T TIGR02315 15 KQALKNINLNINPGEFVAIIGPSGAGKSTLLRCINRLVEPS---SGSILLEGTDITKLRGKKLRKLRRRIGMIFQHYNLI 91 (243)
T ss_pred cceeecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ccEEEECCEEhhhCCHHHHHHHHhheEEEcCCCccc
Confidence 45999999999999999999999999999999999999887 8999999998765321 35699999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||+||+.++...... ... .. .+..+..+ ...++.+++.+||++..|..+.
T Consensus 92 ~~~tv~~~l~~~~~~~~~--~~~---~~------~~~~~~~~---------------~~~~~~~l~~~~l~~~~~~~~~- 144 (243)
T TIGR02315 92 ERLTVLENVLHGRLGYKP--TWR---SL------LGRFSEED---------------KERALSALERVGLADKAYQRAD- 144 (243)
T ss_pred ccccHHHHHhhccccccc--chh---hh------hccccHHH---------------HHHHHHHHHHcCcHhhhcCCcc-
Confidence 999999999875321100 000 00 00000000 0113457888999877776554
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++.+++|++++|
T Consensus 145 ----~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~tH~~~-~~~~~~d~v~~l 219 (243)
T TIGR02315 145 ----QLSGGQQQRVAIARALAQQPDLILADEPIASLDPKTSKQVMDYLKRINKEDGITVIINLHQVD-LAKKYADRIVGL 219 (243)
T ss_pred ----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCeEEEE
Confidence 599999999999999999999999999999999999999999999987655788888877654 677899999999
Q ss_pred cCCeEEEecChhHH
Q 045902 420 SEGEIVYQGPREYV 433 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~ 433 (1472)
++|++++.|+++++
T Consensus 220 ~~G~i~~~~~~~~~ 233 (243)
T TIGR02315 220 KAGEIVFDGAPSEL 233 (243)
T ss_pred ECCEEEecCCHHHh
Confidence 99999999998764
No 219
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=1.9e-34 Score=327.92 Aligned_cols=196 Identities=26% Similarity=0.369 Sum_probs=165.5
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---h-cccceeEEeccCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---E-TFARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~-~~~~~~gyv~Q~~~~~~~l 978 (1472)
+.+|+|+||+|++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... . ..++.++|++|++.+++.+
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 92 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTR--PDEGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFENL 92 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCeEEECCeecCCCCHHHHHhcCeeEeccccccCCCC
Confidence 469999999999999999999999999999999999876 358999999987532 1 1234699999999999999
Q ss_pred CHHHHHHHHHHcC---------CC---chHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 045902 979 TIYESLLYSAWLR---------LP---KDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFM 1046 (1472)
Q Consensus 979 Tv~e~l~~~~~l~---------~~---~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~L 1046 (1472)
||+||+.+..... .. ....++++++.+++.+..+..+ ..||||||||++||+||+.+|++|+|
T Consensus 93 tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Ge~qrv~laral~~~p~~lll 167 (242)
T TIGR03411 93 TVFENLELALPRDKSVFASLFFRLSAEEKDRIEEVLETIGLADEADRLA-----GLLSHGQKQWLEIGMLLMQDPKLLLL 167 (242)
T ss_pred CHHHHHHHhhhcccccccccccccHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEe
Confidence 9999998754311 01 1235677888888876655543 47999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1047 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1047 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||||+|||+.++..+++.|+++.+ ++|||++||+++ ++.+.||++++|++ |+++..|+.
T Consensus 168 DEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-g~~~~~~~~ 226 (242)
T TIGR03411 168 DEPVAGMTDEETEKTAELLKSLAG-KHSVVVVEHDME-FVRSIADKVTVLHQ-GSVLAEGSL 226 (242)
T ss_pred cCCccCCCHHHHHHHHHHHHHHhc-CCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEeeCCH
Confidence 999999999999999999999976 799999999976 46678999999985 788888875
No 220
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=335.64 Aligned_cols=213 Identities=22% Similarity=0.345 Sum_probs=171.7
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.++.. ....+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 3 l~~~~l~~~y~~~--------~~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~--p~~G~i~~~g~~i~ 72 (286)
T PRK13646 3 IRFDNVSYTYQKG--------TPYEHQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLK--PTTGTVTVDDITIT 72 (286)
T ss_pred EEEEEEEEEECCC--------CccccCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEECc
Confidence 5677777665310 0012469999999999999999999999999999999999877 45899999998763
Q ss_pred h-------hcccceeEEeccCC--CCCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccc-cccccccCCCCCCCC
Q 045902 958 Q-------ETFARISGYCEQND--IHSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMK-ALRNSLVGLPGVDGL 1023 (1472)
Q Consensus 958 ~-------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~~L 1023 (1472)
. ..+++.+|||+|++ .+++ .||.||+.|..... .+.+ ..++++++.+|+. +..++. +..|
T Consensus 73 ~~~~~~~~~~~~~~ig~v~q~~~~~l~~-~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~~L 146 (286)
T PRK13646 73 HKTKDKYIRPVRKRIGMVFQFPESQLFE-DTVEREIIFGPKNFKMNLDEVKNYAHRLLMDLGFSRDVMSQS-----PFQM 146 (286)
T ss_pred cccccchHHHHHhheEEEecChHhccch-hhHHHHHHhhHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccC
Confidence 2 23566799999986 3444 59999998865432 2222 3456777888875 454543 3579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .|+|||++||+++ ++.+.+|++++|.+ |++
T Consensus 147 SgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dri~~l~~-G~i 224 (286)
T PRK13646 147 SGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADEVIVMKE-GSI 224 (286)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEE
Confidence 99999999999999999999999999999999999999999999976 4899999999976 46788999999985 789
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
++.|+.
T Consensus 225 ~~~g~~ 230 (286)
T PRK13646 225 VSQTSP 230 (286)
T ss_pred EEECCH
Confidence 988875
No 221
>PRK13650 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.7e-34 Score=334.34 Aligned_cols=212 Identities=24% Similarity=0.327 Sum_probs=175.2
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.++. ...+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (279)
T PRK13650 4 IIEVKNLTFKYKE----------DQEKYTLNDVSFHVKQGEWLSIIGHNGSGKSTTVRLIDGLLE--AESGQIIIDGDLL 71 (279)
T ss_pred eEEEEeEEEEcCC----------CCcCeeeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEC
Confidence 3667787776521 012359999999999999999999999999999999999876 4589999999886
Q ss_pred Ch---hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcC-CCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHH
Q 045902 957 KQ---ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLR-LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQR 1028 (1472)
Q Consensus 957 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~-~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqr 1028 (1472)
.. ...++.+||++|++. .++..||+||+.|..... .+. ...++++++.+++.+..+... ..||||||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGq~ 146 (279)
T PRK13650 72 TEENVWDIRHKIGMVFQNPDNQFVGATVEDDVAFGLENKGIPHEEMKERVNEALELVGMQDFKEREP-----ARLSGGQK 146 (279)
T ss_pred CcCcHHHHHhhceEEEcChHHhcccccHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHHH
Confidence 42 234567999999973 667889999998865432 222 135678888888887666553 47999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcC
Q 045902 1029 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGP 1107 (1472)
Q Consensus 1029 qRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~ 1107 (1472)
||++||++|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++. + ..+|++++|.+ |+++..|+
T Consensus 147 qrv~lAral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~l~~~~g~tilivtH~~~~-~-~~~dri~~l~~-G~i~~~g~ 223 (279)
T PRK13650 147 QRVAIAGAVAMRPKIIILDEATSMLDPEGRLELIKTIKGIRDDYQMTVISITHDLDE-V-ALSDRVLVMKN-GQVESTST 223 (279)
T ss_pred HHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEEEECC
Confidence 9999999999999999999999999999999999999999875 9999999999763 4 67999999985 78998887
Q ss_pred C
Q 045902 1108 L 1108 (1472)
Q Consensus 1108 ~ 1108 (1472)
.
T Consensus 224 ~ 224 (279)
T PRK13650 224 P 224 (279)
T ss_pred H
Confidence 5
No 222
>cd03263 ABC_subfamily_A The ABCA subfamily mediates the transport of a variety of lipid compounds. Mutations of members of ABCA subfamily are associated with human genetic diseases, such as, familial high-density lipoprotein (HDL) deficiency, neonatal surfactant deficiency, degenerative retinopathies, and congenital keratinization disorders. The ABCA1 protein is involved in disorders of cholesterol transport and high-density lipoprotein (HDL) biosynthesis. The ABCA4 (ABCR) protein transports vitamin A derivatives in the outer segments of photoreceptor cells, and therefore, performs a crucial step in the visual cycle. The ABCA genes are not present in yeast. However, evolutionary studies of ABCA genes indicate that they arose as transporters that subsequently duplicated and that certain sets of ABCA genes were lost in different eukaryotic lineages.
Probab=100.00 E-value=1.5e-34 Score=323.96 Aligned_cols=203 Identities=28% Similarity=0.408 Sum_probs=170.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lT 263 (1472)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++.+++.+|
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~v~q~~~~~~~~t 91 (220)
T cd03263 15 KPAVDDLSLNVYKGEIFGLLGHNGAGKTTTLKMLTGELRPT---SGTAYINGYSIRTDRKAARQSLGYCPQFDALFDELT 91 (220)
T ss_pred ceeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEecccchHHHhhhEEEecCcCCccccCC
Confidence 46999999999999999999999999999999999999887 899999999875421 2356999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.+..+..+... .+ . ....+.+++.+||++..++.+++
T Consensus 92 v~~~l~~~~~~~~~~~----------~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~---- 133 (220)
T cd03263 92 VREHLRFYARLKGLPK----------SE----------I--------------KEEVELLLRVLGLTDKANKRART---- 133 (220)
T ss_pred HHHHHHHHHHHcCCCH----------HH----------H--------------HHHHHHHHHHcCCHHHHhChhhh----
Confidence 9999987644322100 00 0 00134578889998877776654
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++. ++.+++|++++|++|+
T Consensus 134 -LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~~~-~~~~~~d~i~~l~~g~ 209 (220)
T cd03263 134 -LSGGMKRKLSLAIALIGGPSVLLLDEPTSGLDPASRRAIWDLILEVRK--GRSIILTTHSMD-EAEALCDRIAIMSDGK 209 (220)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEECCCCCCCCHHHHHHHHHHHHHHhc--CCEEEEEcCCHH-HHHHhcCEEEEEECCE
Confidence 999999999999999999999999999999999999999999999865 478888877654 6778999999999999
Q ss_pred EEEecChhHH
Q 045902 424 IVYQGPREYV 433 (1472)
Q Consensus 424 iv~~G~~~~~ 433 (1472)
+++.|+.+++
T Consensus 210 i~~~~~~~~~ 219 (220)
T cd03263 210 LRCIGSPQEL 219 (220)
T ss_pred EEecCCHHHc
Confidence 9999988764
No 223
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-34 Score=327.63 Aligned_cols=208 Identities=27% Similarity=0.365 Sum_probs=171.3
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~ 68 (241)
T PRK14250 4 IEFKEVSYSS-------------FGKEILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLID--PTEGSILIDGVDIK 68 (241)
T ss_pred EEEEeEEEEe-------------CCeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEhh
Confidence 5677776654 23469999999999999999999999999999999999876 45899999998753
Q ss_pred h---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHH
Q 045902 958 Q---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTI 1033 (1472)
Q Consensus 958 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~i 1033 (1472)
. ...++.++|++|++.+++ .|++||+.+....+......++++++.+++. ++.++. +..||||||||++|
T Consensus 69 ~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qrl~l 142 (241)
T PRK14250 69 TIDVIDLRRKIGMVFQQPHLFE-GTVKDNIEYGPMLKGEKNVDVEYYLSIVGLNKEYATRD-----VKNLSGGEAQRVSI 142 (241)
T ss_pred hcChHHhhhcEEEEecCchhch-hhHHHHHhcchhhcCcHHHHHHHHHHHcCCCHHHhhCC-----cccCCHHHHHHHHH
Confidence 2 234567899999988776 6999999875433222234567788888885 444443 34799999999999
Q ss_pred HHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1034 AVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1034 A~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 143 a~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 216 (241)
T PRK14250 143 ARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNK-GILVEYAKT 216 (241)
T ss_pred HHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeC-CEEEEeCCH
Confidence 99999999999999999999999999999999999764 899999999976 46778999999985 788888875
No 224
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=6.9e-34 Score=335.39 Aligned_cols=213 Identities=20% Similarity=0.233 Sum_probs=172.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEcCCC--
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYISQHD-- 256 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d-- 256 (1472)
..+|+|||++|++||+++|+|+||||||||+++|+|.++++...+|+|.++|.++..... ++.++||+|++
T Consensus 29 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~~ 108 (330)
T PRK09473 29 VTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGREILNLPEKELNKLRAEQISMIFQDPMT 108 (330)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEECCcCCHHHHHHHhcCCEEEEEcCchh
Confidence 569999999999999999999999999999999999998742238999999999876532 14799999997
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccc
Q 045902 257 LHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIM 336 (1472)
Q Consensus 257 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 336 (1472)
.+.|.+||.+++.+....... ....+ . ...+..+++.+||++..++
T Consensus 109 ~l~p~~~v~~~i~~~~~~~~~---------~~~~~----------~--------------~~~~~~~L~~vgL~~~~~~- 154 (330)
T PRK09473 109 SLNPYMRVGEQLMEVLMLHKG---------MSKAE----------A--------------FEESVRMLDAVKMPEARKR- 154 (330)
T ss_pred hcCCCCCHHHHHHHHHHHhcC---------CCHHH----------H--------------HHHHHHHHHHcCCCChHHH-
Confidence 688999999999765332110 00000 0 0013456788888753322
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 337 VGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 337 vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
. +.++..|||||||||+||+||+.+|++|++||||+|||..++.++.+.|+++.+..+.|+|++.|+. ..+.+++|+|
T Consensus 155 ~-~~~p~~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl-~~~~~~~Dri 232 (330)
T PRK09473 155 M-KMYPHEFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDL-GVVAGICDKV 232 (330)
T ss_pred h-cCCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCH-HHHHHhCCEE
Confidence 2 3566779999999999999999999999999999999999999999999999876688888877665 4777899999
Q ss_pred EEecCCeEEEecChhHHH
Q 045902 417 ILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~~ 434 (1472)
++|++|++++.|+.+++.
T Consensus 233 ~vm~~G~ive~g~~~~i~ 250 (330)
T PRK09473 233 LVMYAGRTMEYGNARDVF 250 (330)
T ss_pred EEEECCEEEEECCHHHHH
Confidence 999999999999998875
No 225
>cd03295 ABC_OpuCA_Osmoprotection OpuCA is a the ATP binding component of a bacterial solute transporter that serves a protective role to cells growing in a hyperosmolar environment. ABC (ATP-binding cassette) transporter nucleotide-binding domain; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition, to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.7e-34 Score=326.61 Aligned_cols=206 Identities=27% Similarity=0.394 Sum_probs=171.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (242)
T cd03295 14 KKAVNNLNLEIAKGEFLVLIGPSGSGKTTTMKMINRLIEPT---SGEIFIDGEDIREQDPVELRRKIGYVIQQIGLFPHM 90 (242)
T ss_pred ceEeeeeEEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCeEcCcCChHHhhcceEEEccCccccCCC
Confidence 46999999999999999999999999999999999999887 8999999998765432 35799999999999999
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc--cccccccCc
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI--CADIMVGNE 340 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~--~~dt~vg~~ 340 (1472)
||+||+.+..+..+.. .. +. ...++.+++.+||++ ..++.+
T Consensus 91 tv~e~l~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~l~l~~~~~~~~~~--- 133 (242)
T cd03295 91 TVEENIALVPKLLKWP----------KE----------KI--------------RERADELLALVGLDPAEFADRYP--- 133 (242)
T ss_pred cHHHHHHHHHHHcCCC----------HH----------HH--------------HHHHHHHHHHcCCCcHHHHhcCh---
Confidence 9999998754322110 00 00 001345788889985 555554
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
+.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++..++|+|++.|++. ++.+++|+|++|+
T Consensus 134 --~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~g~tvii~sH~~~-~~~~~~d~i~~l~ 210 (242)
T cd03295 134 --HELSGGQQQRVGVARALAADPPLLLMDEPFGALDPITRDQLQEEFKRLQQELGKTIVFVTHDID-EAFRLADRIAIMK 210 (242)
T ss_pred --hhCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEecCHH-HHHHhCCEEEEEE
Confidence 4599999999999999999999999999999999999999999999997755788888887764 6778999999999
Q ss_pred CCeEEEecChhHHH
Q 045902 421 EGEIVYQGPREYVL 434 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~ 434 (1472)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (242)
T cd03295 211 NGEIVQVGTPDEIL 224 (242)
T ss_pred CCEEEEecCHHHHH
Confidence 99999999987663
No 226
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=2.5e-34 Score=327.30 Aligned_cols=200 Identities=23% Similarity=0.278 Sum_probs=162.2
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcc-cceeEEeccCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETF-ARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~-~~~~gyv~Q~~~~~~~l 978 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|.....+.+|+|.++|.+... ... +..++|++|++.+++.+
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVTSGTILFKGQDLLELEPDERARAGLFLAFQYPEEIPGV 92 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCcceEEECCEecCCCCHHHhhccceEeeeccccccCCc
Confidence 56999999999999999999999999999999999984211458999999987542 122 23489999999999999
Q ss_pred CHHHHHHHHHHcCC--------Cc---hHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 045902 979 TIYESLLYSAWLRL--------PK---DMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFM 1046 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~--------~~---~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~L 1046 (1472)
|++|++.+...... .. .+.++++++.+++. .+.+.... ..||||||||++||++|+.+|++|+|
T Consensus 93 t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~----~~LS~G~~qrl~la~al~~~p~llll 168 (243)
T TIGR01978 93 SNLEFLRSALNARRSARGEEPLDLLDFLKLLKAKLALLGMDEEFLNRSVN----EGFSGGEKKRNEILQMALLEPKLAIL 168 (243)
T ss_pred CHHHHHHHHHHHhhcccccccccHHHHHHHHHHHHHHcCCchhhcccccc----cCcCHHHHHHHHHHHHHhcCCCEEEe
Confidence 99999987543211 11 13456677777775 34443321 24999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHh-hCeEEEEecCcEEEEEcCC
Q 045902 1047 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1047 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~-~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||||+|||+.++..+.+.|++++++|+|||++||+++ .+... +|++++|++ |++++.|+.
T Consensus 169 DEPt~~LD~~~~~~l~~~l~~~~~~~~tvi~vsH~~~-~~~~~~~d~i~~l~~-G~i~~~g~~ 229 (243)
T TIGR01978 169 DEIDSGLDIDALKIVAEGINRLREPDRSFLIITHYQR-LLNYIKPDYVHVLLD-GRIVKSGDV 229 (243)
T ss_pred cCCcccCCHHHHHHHHHHHHHHHHCCcEEEEEEecHH-HHHhhcCCeEEEEeC-CEEEEecCH
Confidence 9999999999999999999999877899999999976 35555 799999985 788888875
No 227
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=1.6e-34 Score=330.49 Aligned_cols=197 Identities=23% Similarity=0.332 Sum_probs=166.4
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----------------hcccceeE
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----------------ETFARISG 966 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----------------~~~~~~~g 966 (1472)
+.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i~ 90 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEP--IDEGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKIG 90 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccccccchhHHHHHhhCeE
Confidence 469999999999999999999999999999999999876 358999999987531 13456799
Q ss_pred EeccCCCCCCCCCHHHHHHHHHHc-C-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCC
Q 045902 967 YCEQNDIHSPNVTIYESLLYSAWL-R-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANP 1041 (1472)
Q Consensus 967 yv~Q~~~~~~~lTv~e~l~~~~~l-~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p 1041 (1472)
|++|++.+++..|+.||+.+.... + .... ..++++++.+++.+..+.. +..||||||||++||++|+.+|
T Consensus 91 ~v~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~-----~~~LS~G~~qrv~laral~~~p 165 (252)
T TIGR03005 91 MVFQSFNLFPHKTVLDNVTEAPVLVLGMARAEAEKRAMELLDMVGLADKADHM-----PAQLSGGQQQRVAIARALAMRP 165 (252)
T ss_pred EEecCcccCCCCcHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCChhHhhcC-----hhhcCHHHHHHHHHHHHHHcCC
Confidence 999999999999999999875321 1 1111 3456778888887665544 3479999999999999999999
Q ss_pred CCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1042 SIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1042 ~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 166 ~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 231 (252)
T TIGR03005 166 KVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-FAREFADRVCFFDK-GRIVEQGKP 231 (252)
T ss_pred CEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999999999999765 899999999976 46678999999985 789888875
No 228
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=328.93 Aligned_cols=214 Identities=27% Similarity=0.327 Sum_probs=170.7
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G 953 (1472)
.+.++|+++.+ +++.+|+|+|++|++||++||+|+||||||||+++|+|..++. +.+|+|.++|
T Consensus 12 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 78 (258)
T PRK14268 12 QIKVENLNLWY-------------GEKQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEG 78 (258)
T ss_pred eEEEeeeEEEe-------------CCeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECC
Confidence 57778877654 2346999999999999999999999999999999999986531 3589999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLS 1024 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LS 1024 (1472)
.++.. ..+++.++|++|++.+++ +|++||+.+....+ .+.+ ..++++++.+++.+....... ..+..||
T Consensus 79 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS 156 (258)
T PRK14268 79 EDIYEPDVDVVELRKNVGMVFQKPNPFP-MSIYDNVAYGPRIHGANKKDLDGVVENALRSAALWDETSDRLK-SPALSLS 156 (258)
T ss_pred EEcccccchHHHHhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCCcchhhhhc-CChhhCC
Confidence 87532 234567999999988887 89999998865432 2221 235667777776421111111 1235799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1025 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1025 gGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
|||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||+++|+++ ++.+.+|++++|.+ |++++
T Consensus 157 gG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~ 233 (258)
T PRK14268 157 GGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK-DYTIVIVTHNMQ-QAARISDYTGFFLM-GELIE 233 (258)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999964 799999999976 46678999999985 78998
Q ss_pred EcCC
Q 045902 1105 AGPL 1108 (1472)
Q Consensus 1105 ~g~~ 1108 (1472)
.|+.
T Consensus 234 ~~~~ 237 (258)
T PRK14268 234 FGQT 237 (258)
T ss_pred eCCH
Confidence 8875
No 229
>PRK11831 putative ABC transporter ATP-binding protein YrbF; Provisional
Probab=100.00 E-value=3.7e-34 Score=330.15 Aligned_cols=207 Identities=21% Similarity=0.339 Sum_probs=172.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.++
T Consensus 20 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 96 (269)
T PRK11831 20 RCIFDNISLTVPRGKITAIMGPSGIGKTTLLRLIGGQIAPD---HGEILFDGENIPAMSRSRLYTVRKRMSMLFQSGALF 96 (269)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEccccChhhHHHHhhcEEEEecccccC
Confidence 35899999999999999999999999999999999999887 8999999998764321 35699999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||.||+.+....... ....+ . ...++.+++.+||++..++.+++
T Consensus 97 ~~~tv~enl~~~~~~~~~---------~~~~~----------~--------------~~~~~~~l~~~gl~~~~~~~~~~ 143 (269)
T PRK11831 97 TDMNVFDNVAYPLREHTQ---------LPAPL----------L--------------HSTVMMKLEAVGLRGAAKLMPSE 143 (269)
T ss_pred CCCCHHHHHHHHHHHccC---------CCHHH----------H--------------HHHHHHHHHHcCChhhhhCChhh
Confidence 999999999875321100 00000 0 00134578899999888877654
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|
T Consensus 144 -----LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~-~~~~~~~d~v~~l 217 (269)
T PRK11831 144 -----LSGGMARRAALARAIALEPDLIMFDEPFVGQDPITMGVLVKLISELNSALGVTCVVVSHDV-PEVLSIADHAYIV 217 (269)
T ss_pred -----CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCcEEEEEecCH-HHHHHhhCEEEEE
Confidence 9999999999999999999999999999999999999999999998765578888887764 4778899999999
Q ss_pred cCCeEEEecChhHHH
Q 045902 420 SEGEIVYQGPREYVL 434 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~ 434 (1472)
++|++++.|+.+++.
T Consensus 218 ~~G~i~~~g~~~~~~ 232 (269)
T PRK11831 218 ADKKIVAHGSAQALQ 232 (269)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999988763
No 230
>COG4559 ABC-type hemin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=1.5e-34 Score=301.40 Aligned_cols=207 Identities=29% Similarity=0.408 Sum_probs=168.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCC---ceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQ---RTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~l 262 (1472)
+.+|++||+.++||||++|+||||||||||||+|+|.+.|+ +|++++||++++.+.+. +.-+..+|+..+-+..
T Consensus 14 r~ll~~vsl~~~pGev~ailGPNGAGKSTlLk~LsGel~p~---~G~v~~~g~~l~~~~~~~lA~~raVlpQ~s~laFpF 90 (259)
T COG4559 14 RRLLDGVSLDLRPGEVLAILGPNGAGKSTLLKALSGELSPD---SGEVTLNGVPLNSWPPEELARHRAVLPQNSSLAFPF 90 (259)
T ss_pred ceeccCcceeccCCcEEEEECCCCccHHHHHHHhhCccCCC---CCeEeeCCcChhhCCHHHHHHHhhhcccCcccccce
Confidence 46899999999999999999999999999999999999998 89999999999988663 5678999998887788
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||+|-+.++..-.+.+.. |.++. ...+..|..-++.+.+..- .
T Consensus 91 tv~eVV~mGr~p~~~g~~-----------------~~e~~---------------~i~~~ala~~d~~~la~R~-----y 133 (259)
T COG4559 91 TVQEVVQMGRIPHRSGRE-----------------PEEDE---------------RIAAQALAATDLSGLAGRD-----Y 133 (259)
T ss_pred EHHHHHHhcccccccCCC-----------------chhhH---------------HHHHHHHHHcChhhhhccc-----h
Confidence 999999998654322211 00000 0123345555555555433 2
Q ss_pred CCCChHHHHHHHHHHHHhC------CCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 343 RGISGGQKKRVTTGEMLVG------PAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~------~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
+.|||||||||.+||.|+. ++++||||||||.||......++++.|++++. |..|++. +|+..-...++|+|
T Consensus 134 ~~LSGGEqQRVqlARvLaQl~~~v~~~r~L~LDEPtsaLDi~HQ~~tl~laR~la~~-g~~V~~V-LHDLNLAA~YaDri 211 (259)
T COG4559 134 RTLSGGEQQRVQLARVLAQLWPPVPSGRWLFLDEPTSALDIAHQHHTLRLARQLARE-GGAVLAV-LHDLNLAAQYADRI 211 (259)
T ss_pred hhcCchHHHHHHHHHHHHHccCCCCCCceEEecCCccccchHHHHHHHHHHHHHHhc-CCcEEEE-EccchHHHHhhhee
Confidence 4599999999999999974 45699999999999999999999999999985 5556655 45667888999999
Q ss_pred EEecCCeEEEecChhHHH
Q 045902 417 ILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~~ 434 (1472)
++|.+||++..|++++++
T Consensus 212 vll~~Grv~a~g~p~~vl 229 (259)
T COG4559 212 VLLHQGRVIASGSPQDVL 229 (259)
T ss_pred eeeeCCeEeecCCHHHhc
Confidence 999999999999998875
No 231
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=2.3e-34 Score=330.93 Aligned_cols=213 Identities=28% Similarity=0.395 Sum_probs=174.6
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCcc
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-YIEGSISISGYP 955 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~G~~ 955 (1472)
.+.++|+++.+ +++.+|+|+|+++++||+++|+||||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 4 ~l~~~nl~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~ 70 (262)
T PRK09984 4 IIRVEKLAKTF-------------NQHQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRT 70 (262)
T ss_pred EEEEeeEEEEe-------------CCeEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEe
Confidence 35677776554 2356999999999999999999999999999999999987643 236999999987
Q ss_pred CCh--------hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC----------CCc--hHHHHHHHHHccccccccccc
Q 045902 956 KKQ--------ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR----------LPK--DMFVEEVMELVEMKALRNSLV 1015 (1472)
Q Consensus 956 ~~~--------~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~----------~~~--~~~~~~v~~~l~l~~~~~~~~ 1015 (1472)
... ...++.++|++|++.+++.+|+.||+.+..... .+. ...++++++.+++.+..++..
T Consensus 71 ~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 71 VQREGRLARDIRKSRANTGYIFQQFNLVNRLSVLENVLIGALGSTPFWRTCFSWFTREQKQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccccccchhHHHHHhheEEEccccccccCCcHHHHHHhhhcccccchhhhcccccHHHHHHHHHHHHHcCCHHHHhCCc
Confidence 532 223456899999999999999999998753210 011 235677888888876666543
Q ss_pred CCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEE
Q 045902 1016 GLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELF 1094 (1472)
Q Consensus 1016 ~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~ 1094 (1472)
..||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||++||+++ .+.+.+|+++
T Consensus 151 -----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 -----STLSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred -----cccCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 479999999999999999999999999999999999999999999999764 899999999976 4678899999
Q ss_pred EEecCcEEEEEcCCC
Q 045902 1095 LMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1095 ~l~~gg~v~~~g~~~ 1109 (1472)
+|.+ |++++.|+..
T Consensus 225 ~l~~-g~i~~~g~~~ 238 (262)
T PRK09984 225 ALRQ-GHVFYDGSSQ 238 (262)
T ss_pred EEEC-CEEEEeCCHH
Confidence 9985 7888888864
No 232
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-34 Score=328.35 Aligned_cols=210 Identities=24% Similarity=0.304 Sum_probs=169.8
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G 953 (1472)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 73 (254)
T PRK14273 7 IIETENLNLFYT-------------DFKALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEG 73 (254)
T ss_pred eEEEeeeEEEeC-------------CceeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECC
Confidence 467888876542 246999999999999999999999999999999999987642 2489999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cc---hHHHHHHHHHcccc----cccccccCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PK---DMFVEEVMELVEMK----ALRNSLVGLPG 1019 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~---~~~~~~v~~~l~l~----~~~~~~~~~~~ 1019 (1472)
.++.. ...++.++|++|++..++ +||+||+.+...... .. +..++++++.+++. +..++ .
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~~-----~ 147 (254)
T PRK14273 74 KNIYSNNFDILELRRKIGMVFQTPNPFL-MSIYDNISYGPKIHGTKDKKKLDEIVEQSLKKSALWNEVKDKLNT-----N 147 (254)
T ss_pred EecccccccHHHHhhceEEEeecccccc-CcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHhCCchhhHHHHhC-----C
Confidence 87531 234567999999988774 899999988654321 11 13456667777663 22232 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1020 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1020 ~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++ +++|||+++|+++ ++.+.+|++++|++
T Consensus 148 ~~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tvii~sH~~~-~~~~~~d~i~~l~~- 224 (254)
T PRK14273 148 ALSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLK-ESYTIIIVTHNMQ-QAGRISDRTAFFLN- 224 (254)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 45799999999999999999999999999999999999999999999996 4799999999986 46788999999985
Q ss_pred cEEEEEcCC
Q 045902 1100 GHVIYAGPL 1108 (1472)
Q Consensus 1100 g~v~~~g~~ 1108 (1472)
|+++..|+.
T Consensus 225 G~i~~~g~~ 233 (254)
T PRK14273 225 GCIEEESST 233 (254)
T ss_pred CEEEEeCCH
Confidence 789888875
No 233
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=2.2e-34 Score=374.21 Aligned_cols=205 Identities=26% Similarity=0.360 Sum_probs=170.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|++++|||.++|+||||||||||+|+|+|.++|+ +|+|.+||+++++..+ ++.++||+|++.+|+ .
T Consensus 466 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 541 (686)
T TIGR03797 466 PLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFETPE---SGSVFYDGQDLAGLDVQAVRRQLGVVLQNGRLMS-G 541 (686)
T ss_pred ccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcCcCCHHHHHhccEEEccCCccCc-c
Confidence 46899999999999999999999999999999999999998 9999999999988764 468999999998885 5
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++|||.++.. . +++++.++.+.+.+ +..++ .+++..||.+| +.+
T Consensus 542 TI~eNi~~~~~-~----------------------~~e~i~~al~~a~l---------~~~i~--~lp~G~dt~ig-e~G 586 (686)
T TIGR03797 542 SIFENIAGGAP-L----------------------TLDEAWEAARMAGL---------AEDIR--AMPMGMHTVIS-EGG 586 (686)
T ss_pred cHHHHHhcCCC-C----------------------CHHHHHHHHHHcCc---------HHHHH--hcccccccccc-CCC
Confidence 99999987532 0 01122222222111 11222 35667799998 457
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
.+||||||||++||||++.+|++|+||||||+||+.++.++.+.|+++ ++|+|++.|++ ++.+.+|+|++|++|
T Consensus 587 ~~LSGGQrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~----~~T~IiItHr~--~~i~~~D~Iivl~~G 660 (686)
T TIGR03797 587 GTLSGGQRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL----KVTRIVIAHRL--STIRNADRIYVLDAG 660 (686)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh----CCeEEEEecCh--HHHHcCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999875 46888888876 567889999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
+++++|+++++++
T Consensus 661 ~iv~~G~~~~Ll~ 673 (686)
T TIGR03797 661 RVVQQGTYDELMA 673 (686)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998864
No 234
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.3e-34 Score=327.54 Aligned_cols=214 Identities=23% Similarity=0.282 Sum_probs=171.0
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISGY 954 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G~ 954 (1472)
+.++|+++.. +++.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14247 4 IEIRDLKVSF-------------GQVEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQ 70 (250)
T ss_pred EEEEeeEEEE-------------CCeeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCE
Confidence 5566766543 2346999999999999999999999999999999999986531 35899999998
Q ss_pred cCCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC---Cch---HHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 955 PKKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL---PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 955 ~~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~---~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
++.. ..+++.+||++|++.+++.+||.||+.+....+. +.. +.++++++.+++.+..+... ...+..|||
T Consensus 71 ~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~LSg 149 (250)
T PRK14247 71 DIFKMDVIELRRRVQMVFQIPNPIPNLSIFENVALGLKLNRLVKSKKELQERVRWALEKAQLWDEVKDRL-DAPAGKLSG 149 (250)
T ss_pred ECCcCCHHHHhccEEEEeccCccCCCCcHHHHHHHHHHhccccCCHHHHHHHHHHHHHHcCCCcchhhhh-cCCcccCCH
Confidence 7632 3445679999999988899999999987643321 112 34566777777643211111 112357999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|++ |+++..
T Consensus 150 G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~ 226 (250)
T PRK14247 150 GQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK-DMTIVLVTHFPQ-QAARISDYVAFLYK-GQIVEW 226 (250)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEEC-CeEEEE
Confidence 999999999999999999999999999999999999999999864 899999999976 46788999999985 788888
Q ss_pred cCC
Q 045902 1106 GPL 1108 (1472)
Q Consensus 1106 g~~ 1108 (1472)
|+.
T Consensus 227 g~~ 229 (250)
T PRK14247 227 GPT 229 (250)
T ss_pred CCH
Confidence 875
No 235
>TIGR02211 LolD_lipo_ex lipoprotein releasing system, ATP-binding protein. This model represents LolD, a member of the ABC transporter family (pfam00005). LolD is involved in localization of lipoproteins in some bacteria. It works with a transmembrane protein LolC, which in some species is a paralogous pair LolC and LolE. Depending on whether the residue immediately following the new, modified N-terminal Cys residue, the nascent lipoprotein may be carried further by LolA and LolB to the outer membrane, or remain at the inner membrane. The top scoring proteins excluded by this model include homologs from the archaeal genus Methanosarcina.
Probab=100.00 E-value=4.5e-34 Score=320.37 Aligned_cols=196 Identities=21% Similarity=0.332 Sum_probs=163.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 258 (1472)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|++.+
T Consensus 18 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~~ 94 (221)
T TIGR02211 18 TRVLKGVSLSIGKGEIVAIVGSSGSGKSTLLHLLGGLDNPT---SGEVLFNGQSLSKLSSNERAKLRNKKLGFIYQFHHL 94 (221)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcCHhHHHHHHHhcEEEEeccccc
Confidence 46999999999999999999999999999999999999887 8999999998765432 1469999999989
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
++.+||+||+.+........ ..+ . ...++.+++.+||++..++.++
T Consensus 95 ~~~~tv~~~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~ 140 (221)
T TIGR02211 95 LPDFTALENVAMPLLIGKKS----------VKE----------A--------------KERAYEMLEKVGLEHRINHRPS 140 (221)
T ss_pred CCCCcHHHHHHHHHHhcCCC----------HHH----------H--------------HHHHHHHHHHcCChhhhhCChh
Confidence 98999999998754321100 000 0 0013457888999877776665
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++++..+.|+|++.|++. ++ +.+|++++
T Consensus 141 -----~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~tH~~~-~~-~~~d~v~~ 213 (221)
T TIGR02211 141 -----ELSGGERQRVAIARALVNQPSLVLADEPTGNLDNNNAKIIFDLMLELNRELNTSFLVVTHDLE-LA-KKLDRVLE 213 (221)
T ss_pred -----hCCHHHHHHHHHHHHHhCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HH-hhcCEEEE
Confidence 499999999999999999999999999999999999999999999997655789999888765 44 45799999
Q ss_pred ecCCeEE
Q 045902 419 LSEGEIV 425 (1472)
Q Consensus 419 L~~G~iv 425 (1472)
|++|+++
T Consensus 214 l~~G~i~ 220 (221)
T TIGR02211 214 MKDGQLF 220 (221)
T ss_pred EeCCEec
Confidence 9999985
No 236
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-34 Score=328.92 Aligned_cols=213 Identities=24% Similarity=0.297 Sum_probs=171.9
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISGY 954 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G~ 954 (1472)
+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 5 l~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~ 71 (253)
T PRK14267 5 IETVNLRVYY-------------GSNHVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGR 71 (253)
T ss_pred EEEEeEEEEe-------------CCeeeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCE
Confidence 5677777654 2246999999999999999999999999999999999987642 35899999998
Q ss_pred cCC-----hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC---Cch---HHHHHHHHHcccccc-cccccCCCCCCC
Q 045902 955 PKK-----QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL---PKD---MFVEEVMELVEMKAL-RNSLVGLPGVDG 1022 (1472)
Q Consensus 955 ~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~---~~~---~~~~~v~~~l~l~~~-~~~~~~~~~~~~ 1022 (1472)
++. ...+++.++|++|++.+++.+|+.||+.+....+. +.+ ..++++++.+++... .+... ..+..
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--~~~~~ 149 (253)
T PRK14267 72 NIYSPDVDPIEVRREVGMVFQYPNPFPHLTIYDNVAIGVKLNGLVKSKKELDERVEWALKKAALWDEVKDRLN--DYPSN 149 (253)
T ss_pred EccccccChHHHhhceeEEecCCccCCCCcHHHHHHHHHHhcCccCCHHHHHHHHHHHHHHcCCccchhhhhc--cChhh
Confidence 763 12345679999999999999999999987654321 111 245667777776421 11111 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|++ |++
T Consensus 150 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 226 (253)
T PRK14267 150 LSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK-EYTIVLVTHSPA-QAARVSDYVAFLYL-GKL 226 (253)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh-CCEEEEEECCHH-HHHhhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999965 699999999976 46778999999985 789
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
+..|+.
T Consensus 227 ~~~~~~ 232 (253)
T PRK14267 227 IEVGPT 232 (253)
T ss_pred EEeCCH
Confidence 988875
No 237
>PRK13646 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.4e-34 Score=332.16 Aligned_cols=205 Identities=22% Similarity=0.309 Sum_probs=169.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-------CCceEEEEcCCC--
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-------PQRTCAYISQHD-- 256 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d-- 256 (1472)
+++|+|||++|++||+++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (286)
T PRK13646 20 HQAIHDVNTEFEQGKYYAIVGQTGSGKSTLIQNINALLKPT---TGTVTVDDITITHKTKDKYIRPVRKRIGMVFQFPES 96 (286)
T ss_pred cCceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhheEEEecChHh
Confidence 45999999999999999999999999999999999999987 899999999885421 235799999985
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-ccccc
Q 045902 257 LHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADI 335 (1472)
Q Consensus 257 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 335 (1472)
.+++ .||.||+.|+....+.. .. +.+ ..++.+++.+||+ +..++
T Consensus 97 ~l~~-~tv~e~i~~~~~~~~~~----------~~----------~~~--------------~~~~~~l~~~gL~~~~~~~ 141 (286)
T PRK13646 97 QLFE-DTVEREIIFGPKNFKMN----------LD----------EVK--------------NYAHRLLMDLGFSRDVMSQ 141 (286)
T ss_pred ccch-hhHHHHHHhhHHHcCCC----------HH----------HHH--------------HHHHHHHHHcCCChhhhhC
Confidence 3444 59999998864321110 00 000 0135578889996 56666
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
.+. .|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++.+..+.|+|++.|++. ++.+++|+
T Consensus 142 ~~~-----~LSgGq~qrv~laraL~~~p~illlDEPt~~LD~~~~~~l~~~l~~l~~~~g~tvl~vtH~~~-~~~~~~dr 215 (286)
T PRK13646 142 SPF-----QMSGGQMRKIAIVSILAMNPDIIVLDEPTAGLDPQSKRQVMRLLKSLQTDENKTIILVSHDMN-EVARYADE 215 (286)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHHhCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCE
Confidence 554 599999999999999999999999999999999999999999999997666889998887654 67789999
Q ss_pred EEEecCCeEEEecChhHHH
Q 045902 416 IILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~ 434 (1472)
|++|++|++++.|+++++.
T Consensus 216 i~~l~~G~i~~~g~~~~~~ 234 (286)
T PRK13646 216 VIVMKEGSIVSQTSPKELF 234 (286)
T ss_pred EEEEECCEEEEECCHHHHH
Confidence 9999999999999988764
No 238
>cd03269 ABC_putative_ATPase This subfamily is involved in drug resistance, nodulation, lipid transport, and bacteriocin and lantibiotic immunity. In eubacteria and archaea, the typical organization consists of one ABC and one or two IMs. Eukaryote systems of the ABCA subfamily display ABC domains strongly similar to this family. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region in addition to the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.7e-34 Score=321.09 Aligned_cols=198 Identities=26% Similarity=0.343 Sum_probs=165.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVR 265 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 265 (1472)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|+++.. ..++.++|++|++.+++.+||+
T Consensus 13 ~~~l~~v~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~-~~~~~i~~~~q~~~~~~~~tv~ 88 (210)
T cd03269 13 VTALDDISFSVEKGEIFGLLGPNGAGKTTTIRMILGIILPD---SGEVLFDGKPLDI-AARNRIGYLPEERGLYPKMKVI 88 (210)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCCchhH-HHHccEEEeccCCcCCcCCcHH
Confidence 35999999999999999999999999999999999999887 8999999988754 2346799999999999999999
Q ss_pred HHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCC
Q 045902 266 ETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGI 345 (1472)
Q Consensus 266 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 345 (1472)
||+.+.....+... . +. ...++.+++.+||++..++.+. .|
T Consensus 89 e~l~~~~~~~~~~~----------~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~-----~L 129 (210)
T cd03269 89 DQLVYLAQLKGLKK----------E----------EA--------------RRRIDEWLERLELSEYANKRVE-----EL 129 (210)
T ss_pred HHHHHHHHHcCCCh----------H----------HH--------------HHHHHHHHHHcCChHHHhCcHh-----hC
Confidence 99987543221100 0 00 0013557888999887776665 49
Q ss_pred ChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEE
Q 045902 346 SGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIV 425 (1472)
Q Consensus 346 SGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv 425 (1472)
||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++ .+.|++++.|++. ++.+++|++++|++|+++
T Consensus 130 S~G~~qrl~la~al~~~p~~lllDEP~~~LD~~~~~~~~~~l~~~~~-~~~tii~~sH~~~-~~~~~~d~i~~l~~g~i~ 207 (210)
T cd03269 130 SKGNQQKVQFIAAVIHDPELLILDEPFSGLDPVNVELLKDVIRELAR-AGKTVILSTHQME-LVEELCDRVLLLNKGRAV 207 (210)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEECCCHH-HHHHhhhEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999876 4788888877654 677889999999999998
Q ss_pred Eec
Q 045902 426 YQG 428 (1472)
Q Consensus 426 ~~G 428 (1472)
+.|
T Consensus 208 ~~~ 210 (210)
T cd03269 208 LYG 210 (210)
T ss_pred ecC
Confidence 764
No 239
>cd03260 ABC_PstB_phosphate_transporter Phosphate uptake is of fundamental importance in the cell physiology of bacteria because phosphate is required as a nutrient. The Pst system of E. coli comprises four distinct subunits encoded by the pstS, pstA, pstB, and pstC genes. The PstS protein is a phosphate-binding protein located in the periplasmic space. P stA and PstC are hydrophobic and they form the transmembrane portion of the Pst system. PstB is the catalytic subunit, which couples the energy of ATP hydrolysis to the import of phosphate across cellular membranes through the Pst system, often referred as ABC-protein. PstB belongs to one of the largest superfamilies of proteins characterized by a highly conserved adenosine triphosphate (ATP) binding cassette (ABC), which is also a nucleotide binding domain (NBD).
Probab=100.00 E-value=2.2e-34 Score=324.15 Aligned_cols=204 Identities=23% Similarity=0.336 Sum_probs=166.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCC-----CCCCCceeEEEEcCeeCCCCC-----CCceEEEEcCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKS-----DKSLRVSGRVTYCGHELTEFV-----PQRTCAYISQH 255 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~-----~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~ 255 (1472)
+++|+|+|+++++||+++|+||||||||||+++|+|.+ ++. +|+|.++|+++.... .++.++|++|+
T Consensus 13 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~ 89 (227)
T cd03260 13 KHALKDISLDIPKGEITALIGPSGCGKSTLLRLLNRLNDLIPGAPD---EGEVLLDGKDIYDLDVDVLELRRRVGMVFQK 89 (227)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCC---CeEEEECCEEhhhcchHHHHHHhhEEEEecC
Confidence 36999999999999999999999999999999999998 776 899999999876432 13579999999
Q ss_pred CCCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccc
Q 045902 256 DLHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADI 335 (1472)
Q Consensus 256 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 335 (1472)
+.++ .+||+||+.++.+..+... .. +. ...++.+++.+||++..+.
T Consensus 90 ~~~~-~~tv~e~l~~~~~~~~~~~---------~~----------~~--------------~~~~~~~l~~~~l~~~~~~ 135 (227)
T cd03260 90 PNPF-PGSIYDNVAYGLRLHGIKL---------KE----------EL--------------DERVEEALRKAALWDEVKD 135 (227)
T ss_pred chhc-cccHHHHHHhHHHhcCCCc---------HH----------HH--------------HHHHHHHHHHcCCChHHhc
Confidence 8888 7999999988643221100 00 00 0113457888899876665
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
.+. +..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++. .|+|++.|++ .++.+++|+
T Consensus 136 ~~~---~~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~--~tii~~sH~~-~~~~~~~d~ 209 (227)
T cd03260 136 RLH---ALGLSGGQQQRLCLARALANEPEVLLLDEPTSALDPISTAKIEELIAELKKE--YTIVIVTHNM-QQAARVADR 209 (227)
T ss_pred cCC---cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhhC--cEEEEEeccH-HHHHHhCCE
Confidence 430 3469999999999999999999999999999999999999999999998763 7888877765 477789999
Q ss_pred EEEecCCeEEEecChhH
Q 045902 416 IILLSEGEIVYQGPREY 432 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~ 432 (1472)
+++|++|++++.|+.++
T Consensus 210 i~~l~~G~i~~~g~~~~ 226 (227)
T cd03260 210 TAFLLNGRLVEFGPTEQ 226 (227)
T ss_pred EEEEeCCEEEEecCccc
Confidence 99999999999998764
No 240
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3e-34 Score=341.26 Aligned_cols=208 Identities=24% Similarity=0.296 Sum_probs=175.6
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCe----eCCCCCC-------CceEEEE
Q 045902 184 RKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGH----ELTEFVP-------QRTCAYI 252 (1472)
Q Consensus 184 ~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~----~~~~~~~-------~~~~~yv 252 (1472)
....+|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|+ ++..... ++.++||
T Consensus 35 g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~p~---~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 35 GLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNPVS---RGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred CCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 3567899999999999999999999999999999999999987 899999996 3333221 2469999
Q ss_pred cCCCCCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccc
Q 045902 253 SQHDLHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDIC 332 (1472)
Q Consensus 253 ~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~ 332 (1472)
+|++.++|.+||+||+.|+....+... .+. ...++.+++.+||++.
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~----------~~~------------------------~~~a~e~le~vgL~~~ 157 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPE----------AER------------------------RKRVDEQLELVGLAQW 157 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCH----------HHH------------------------HHHHHHHHHHcCCchh
Confidence 999999999999999998754332110 000 0123567899999888
Q ss_pred ccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhc
Q 045902 333 ADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDL 412 (1472)
Q Consensus 333 ~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~ 412 (1472)
.|..+++ |||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+..++|+|++.|+. .++.++
T Consensus 158 ~~~~~~~-----LSgGq~QRV~LARALa~~P~ILLlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl-~e~~~l 231 (382)
T TIGR03415 158 ADKKPGE-----LSGGMQQRVGLARAFAMDADILLMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDL-DEALKI 231 (382)
T ss_pred hcCChhh-----CCHHHHHHHHHHHHHhcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHh
Confidence 8877654 9999999999999999999999999999999999999999999999876688998887765 478899
Q ss_pred cCeEEEecCCeEEEecChhHHH
Q 045902 413 FDDIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 413 fD~iilL~~G~iv~~G~~~~~~ 434 (1472)
+|+|++|++|+++..|+++++.
T Consensus 232 ~DrI~vl~~G~iv~~g~~~ei~ 253 (382)
T TIGR03415 232 GNRIAIMEGGRIIQHGTPEEIV 253 (382)
T ss_pred CCEEEEEECCEEEEecCHHHHh
Confidence 9999999999999999998874
No 241
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-34 Score=331.94 Aligned_cols=196 Identities=23% Similarity=0.356 Sum_probs=165.9
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCCC-CCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQNDI-HSPN 977 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~~-~~~~ 977 (1472)
+.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.+||++|++. .+..
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 15 TPALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLR--PQKGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred CceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 459999999999999999999999999999999999876 458999999987642 234567999999975 3667
Q ss_pred CCHHHHHHHHHHcC-CCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 978 VTIYESLLYSAWLR-LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 978 lTv~e~l~~~~~l~-~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
.|+.||+.+..... .+. ...++++++.+++.+..+... ..||||||||++||+||+.+|+||+|||||+||
T Consensus 93 ~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEPt~gL 167 (274)
T PRK13644 93 RTVEEDLAFGPENLCLPPIEIRKRVDRALAEIGLEKYRHRSP-----KTLSGGQGQCVALAGILTMEPECLIFDEVTSML 167 (274)
T ss_pred chHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHHHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCcccC
Confidence 89999998765432 221 234667788888877666543 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1054 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+.++..+++.|++++++|+|||++||+++ ++ +.+|++++|++ |++++.|+.
T Consensus 168 D~~~~~~l~~~l~~l~~~g~til~~tH~~~-~~-~~~d~v~~l~~-G~i~~~g~~ 219 (274)
T PRK13644 168 DPDSGIAVLERIKKLHEKGKTIVYITHNLE-EL-HDADRIIVMDR-GKIVLEGEP 219 (274)
T ss_pred CHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HH-hhCCEEEEEEC-CEEEEECCH
Confidence 999999999999999877999999999976 34 67999999985 789998875
No 242
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-34 Score=329.92 Aligned_cols=199 Identities=27% Similarity=0.406 Sum_probs=167.7
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~l 978 (1472)
++.+|+|+|+++++||+++|+|+||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+..+++.+
T Consensus 14 ~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 14 TKRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLT--PQSGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred CEEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCCcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 3579999999999999999999999999999999999876 458999999987532 23455689999999888889
Q ss_pred CHHHHHHHHHH-----cCC-Cc--hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 045902 979 TIYESLLYSAW-----LRL-PK--DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1050 (1472)
Q Consensus 979 Tv~e~l~~~~~-----l~~-~~--~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPT 1050 (1472)
|+.|++.+... ... +. ...++++++.+++.+..++.. ..||||||||++||+||+.+|++|+|||||
T Consensus 92 tv~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~ 166 (255)
T PRK11231 92 TVRELVAYGRSPWLSLWGRLSAEDNARVNQAMEQTRINHLADRRL-----TDLSGGQRQRAFLAMVLAQDTPVVLLDEPT 166 (255)
T ss_pred cHHHHHHhccchhhhhccCCCHHHHHHHHHHHHHcCCHHHHcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCc
Confidence 99999987521 111 11 234567788888876666543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1051 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1051 sgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |+++..|+.+
T Consensus 167 ~~LD~~~~~~l~~~l~~l~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~ 223 (255)
T PRK11231 167 TYLDINHQVELMRLMRELNTQGKTVVTVLHDLN-QASRYCDHLVVLAN-GHVMAQGTPE 223 (255)
T ss_pred ccCCHHHHHHHHHHHHHHHHCCCEEEEEECCHH-HHHHhcCEEEEEEC-CeEEEEcCHH
Confidence 999999999999999999877999999999986 57789999999985 7888888764
No 243
>KOG0062 consensus ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b [Amino acid transport and metabolism; Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=3.5e-34 Score=331.82 Aligned_cols=204 Identities=21% Similarity=0.240 Sum_probs=148.6
Q ss_pred ceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCc
Q 045902 875 PLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGY 954 (1472)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~ 954 (1472)
+..+.+.++.+..+. +.-+++.+++..++.-+..+++|+||+||||+++++.|..+ +..|.+.+.+
T Consensus 360 ~p~l~i~~V~f~y~p-----------~~y~~~~~~~~d~e~~sRi~~vg~ng~gkst~lKi~~~~l~--~~rgi~~~~~- 425 (582)
T KOG0062|consen 360 PPNLRISYVAFEYTP-----------SEYQWRKQLGLDRESDSRISRVGENGDGKSTLLKILKGDLT--PTRGIVGRHP- 425 (582)
T ss_pred CCeeEEEeeeccCCC-----------cchhhhhccCCccchhhhhheeccCchhHHHHHHHHhccCC--cccceeeecc-
Confidence 445667776654321 22268999999999999999999999999999999999765 3467776654
Q ss_pred cCChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHH
Q 045902 955 PKKQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIA 1034 (1472)
Q Consensus 955 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA 1034 (1472)
+++++|-.|...-+.++.|.+--.. ..++.. ...+++.+.++..++...+.-.+ +.+||||||-||++|
T Consensus 426 -------r~ri~~f~Qhhvd~l~~~v~~vd~~-~~~~pG--~~~ee~r~hl~~~Gl~g~la~~s-i~~LSGGQKsrvafA 494 (582)
T KOG0062|consen 426 -------RLRIKYFAQHHVDFLDKNVNAVDFM-EKSFPG--KTEEEIRRHLGSFGLSGELALQS-IASLSGGQKSRVAFA 494 (582)
T ss_pred -------cceecchhHhhhhHHHHHhHHHHHH-HHhCCC--CCHHHHHHHHHhcCCCchhhhcc-ccccCCcchhHHHHH
Confidence 4568999987655445555443322 222211 12344444444444444443333 568999999999999
Q ss_pred HHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcC
Q 045902 1035 VELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGP 1107 (1472)
Q Consensus 1035 ~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~ 1107 (1472)
.....+|.+|+|||||+.||..+-..+-+.|+.. +..||++||+.+. +-..|+++.+.++|...-..|.
T Consensus 495 ~~~~~~PhlLVLDEPTNhLD~dsl~AL~~Al~~F---~GGVv~VSHd~~f-i~~~c~E~Wvve~g~vt~ieg~ 563 (582)
T KOG0062|consen 495 ACTWNNPHLLVLDEPTNHLDRDSLGALAKALKNF---NGGVVLVSHDEEF-ISSLCKELWVVEDGKVTPIEGG 563 (582)
T ss_pred HHhcCCCcEEEecCCCccccHHHHHHHHHHHHhc---CCcEEEEECcHHH-HhhcCceeEEEcCCcEEeeecc
Confidence 9999999999999999999999999999999877 4679999999653 6668999999987554445554
No 244
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.6e-34 Score=326.93 Aligned_cols=215 Identities=26% Similarity=0.357 Sum_probs=170.3
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC---CCeeEEEEEEc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT---GGYIEGSISIS 952 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~---~~~~~G~i~i~ 952 (1472)
..+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... +.+.+|+|.++
T Consensus 5 ~~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~ 71 (253)
T PRK14242 5 PKMEARGLSFFYG-------------DFQALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLD 71 (253)
T ss_pred cEEEEeeeEEEEC-------------CeeeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEEC
Confidence 3577888876652 2469999999999999999999999999999999999742 11358999999
Q ss_pred CccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cc---hHHHHHHHHHcccccccccccCCCCCCC
Q 045902 953 GYPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PK---DMFVEEVMELVEMKALRNSLVGLPGVDG 1022 (1472)
Q Consensus 953 G~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~ 1022 (1472)
|.++.. ...++.++|++|++.+++ .||.||+.+....+. +. ...++++++.+++.+....... ..+..
T Consensus 72 g~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 149 (253)
T PRK14242 72 GENIYDPHVDVVELRRRVGMVFQKPNPFP-KSIFENVAYGLRVNGVKDKAYLAERVERSLRHAALWDEVKDRLH-ESALG 149 (253)
T ss_pred CEEccccccCHHHHhhcEEEEecCCCCCc-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCchhhhHHhh-CCccc
Confidence 987632 234567999999988887 599999988654331 11 1345566777776432111111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ |+|||+++|+++ ++.+.+|++++|.+ |++
T Consensus 150 LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tvii~tH~~~-~~~~~~d~v~~l~~-G~i 226 (253)
T PRK14242 150 LSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA-RYTIIIVTHNMQ-QAARVSDVTAFFYM-GKL 226 (253)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCeEEEEEecHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999954 799999999976 46688999999986 788
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
+..|+.
T Consensus 227 ~~~g~~ 232 (253)
T PRK14242 227 IEVGPT 232 (253)
T ss_pred EEeCCH
Confidence 888864
No 245
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-34 Score=331.52 Aligned_cols=211 Identities=29% Similarity=0.406 Sum_probs=174.2
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|++..+ +++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~i~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~ 75 (265)
T PRK10575 11 TFALRNVSFRV-------------PGRTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQP--PSEGEILLDAQPL 75 (265)
T ss_pred eEEEeeEEEEE-------------CCEEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEeh
Confidence 46777776554 23469999999999999999999999999999999999876 4589999999875
Q ss_pred C---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHc-C----CCc---hHHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 957 K---QETFARISGYCEQNDIHSPNVTIYESLLYSAWL-R----LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 957 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l-~----~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
. ...+++.++|++|+..+++.+|+.||+.+.... + ... +..++++++.+++.+..++.. ..|||
T Consensus 76 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 150 (265)
T PRK10575 76 ESWSSKAFARKVAYLPQQLPAAEGMTVRELVAIGRYPWHGALGRFGAADREKVEEAISLVGLKPLAHRLV-----DSLSG 150 (265)
T ss_pred hhCCHHHHhhheEEeccCCCCCCCccHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCCc-----ccCCH
Confidence 3 233456789999998888899999999875321 1 111 234667788888876555543 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
|||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |+++.
T Consensus 151 G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~~-~i~~~~d~i~~l~~-G~i~~ 228 (265)
T PRK10575 151 GERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDIN-MAARYCDYLVALRG-GEMIA 228 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999765 899999999976 46788999999985 78888
Q ss_pred EcCCC
Q 045902 1105 AGPLG 1109 (1472)
Q Consensus 1105 ~g~~~ 1109 (1472)
.|+..
T Consensus 229 ~~~~~ 233 (265)
T PRK10575 229 QGTPA 233 (265)
T ss_pred ecCHH
Confidence 88753
No 246
>PRK09536 btuD corrinoid ABC transporter ATPase; Reviewed
Probab=100.00 E-value=3.6e-34 Score=343.24 Aligned_cols=209 Identities=25% Similarity=0.418 Sum_probs=174.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|+.+++||+++|+||||||||||||+|+|.++|. +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 16 ~~vL~~vs~~i~~Geiv~liGpNGaGKSTLLk~LaGll~p~---sG~I~l~G~~i~~~~~~~~~~~ig~v~q~~~l~~~~ 92 (402)
T PRK09536 16 TTVLDGVDLSVREGSLVGLVGPNGAGKTTLLRAINGTLTPT---AGTVLVAGDDVEALSARAASRRVASVPQDTSLSFEF 92 (402)
T ss_pred EEEEEeeEEEECCCCEEEEECCCCchHHHHHHHHhcCCCCC---CcEEEECCEEcCcCCHHHHhcceEEEccCCCCCCCC
Confidence 46999999999999999999999999999999999999987 8999999998876432 36799999999998999
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||+||+.++..-... +.. ..... + ...++.+++.+||.+..|+.+.
T Consensus 93 tv~e~v~~~~~~~~~--~~~---~~~~~----------~---------------~~~v~~~le~vgl~~~~~~~~~---- 138 (402)
T PRK09536 93 DVRQVVEMGRTPHRS--RFD---TWTET----------D---------------RAAVERAMERTGVAQFADRPVT---- 138 (402)
T ss_pred CHHHHHHhccchhcc--ccc---CCCHH----------H---------------HHHHHHHHHHcCCchhhcCChh----
Confidence 999999885321100 000 00000 0 0124668899999888887665
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
.|||||||||.|||||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|+|++.|+ .+++.+++|++++|++|
T Consensus 139 -~LSgGerQRv~IArAL~~~P~iLLLDEPtsgLD~~~~~~l~~lL~~l~~-~g~TIIivsHd-l~~~~~~adrii~l~~G 215 (402)
T PRK09536 139 -SLSGGERQRVLLARALAQATPVLLLDEPTASLDINHQVRTLELVRRLVD-DGKTAVAAIHD-LDLAARYCDELVLLADG 215 (402)
T ss_pred -hCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEECC-HHHHHHhCCEEEEEECC
Confidence 4999999999999999999999999999999999999999999999986 57888888765 45788999999999999
Q ss_pred eEEEecChhHHH
Q 045902 423 EIVYQGPREYVL 434 (1472)
Q Consensus 423 ~iv~~G~~~~~~ 434 (1472)
++++.|+++++.
T Consensus 216 ~iv~~G~~~ev~ 227 (402)
T PRK09536 216 RVRAAGPPADVL 227 (402)
T ss_pred EEEEecCHHHHh
Confidence 999999998764
No 247
>PRK15079 oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Probab=100.00 E-value=4e-34 Score=337.19 Aligned_cols=224 Identities=22% Similarity=0.257 Sum_probs=175.4
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|++..++................+|+|||++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 8 ~l~v~~l~~~~~~~~~~~~~~~~~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTLlk~i~Gl~~p--~~G~I~~~G~~i 85 (331)
T PRK15079 8 LLEVADLKVHFDIKDGKQWFWQPPKTLKAVDGVTLRLYEGETLGVVGESGCGKSTFARAIIGLVKA--TDGEVAWLGKDL 85 (331)
T ss_pred eEEEeCeEEEECCCCccccccccCCceEEEeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHCCCCC--CCcEEEECCEEC
Confidence 467778776653211000000001235799999999999999999999999999999999998774 589999999876
Q ss_pred Ch---h---cccceeEEeccCC--CCCCCCCHHHHHHHHHHcC---CCch---HHHHHHHHHcccc-cccccccCCCCCC
Q 045902 957 KQ---E---TFARISGYCEQND--IHSPNVTIYESLLYSAWLR---LPKD---MFVEEVMELVEMK-ALRNSLVGLPGVD 1021 (1472)
Q Consensus 957 ~~---~---~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~---~~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~ 1021 (1472)
.. . .+++.++||+|++ .++|.+||.|++.+..... .+.+ ..++++++.+++. ...++. +.
T Consensus 86 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~tv~~~i~~~l~~~~~~~~~~~~~~~~~~~l~~vgl~~~~~~~~-----p~ 160 (331)
T PRK15079 86 LGMKDDEWRAVRSDIQMIFQDPLASLNPRMTIGEIIAEPLRTYHPKLSRQEVKDRVKAMMLKVGLLPNLINRY-----PH 160 (331)
T ss_pred CcCCHHHHHHHhCceEEEecCchhhcCCCCCHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHhcCC-----cc
Confidence 42 1 2456799999997 5788999999998764432 2222 3456777777773 233332 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCc
Q 045902 1022 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1100 (1472)
Q Consensus 1022 ~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg 1100 (1472)
.|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++|.+ |
T Consensus 161 ~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~~~til~iTHdl~-~~~~~~dri~vl~~-G 238 (331)
T PRK15079 161 EFSGGQCQRIGIARALILEPKLIICDEPVSALDVSIQAQVVNLLQQLQREMGLSLIFIAHDLA-VVKHISDRVLVMYL-G 238 (331)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 79999999999999999999999999999999999999999999999765 899999999976 46678999999985 7
Q ss_pred EEEEEcCCC
Q 045902 1101 HVIYAGPLG 1109 (1472)
Q Consensus 1101 ~v~~~g~~~ 1109 (1472)
+++..|+..
T Consensus 239 ~ive~g~~~ 247 (331)
T PRK15079 239 HAVELGTYD 247 (331)
T ss_pred EEEEEcCHH
Confidence 999999853
No 248
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.8e-34 Score=329.20 Aligned_cols=216 Identities=26% Similarity=0.368 Sum_probs=176.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCC-CCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHD-LHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d-~~~~~ 261 (1472)
+++|+|+|++|++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++..... ++.++|++|++ ..++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~~~ 96 (279)
T PRK13635 20 TYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLPE---AGTITVGGMVLSEETVWDVRRQVGMVFQNPDNQFVG 96 (279)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CcEEEECCEECCcCcHHHHhhheEEEEeCHHHhccc
Confidence 35899999999999999999999999999999999999987 9999999999865432 35799999997 36777
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.+..+..+.. .. +. ...++.+++.+||++..++.++.
T Consensus 97 ~tv~enl~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~gL~~~~~~~~~~-- 140 (279)
T PRK13635 97 ATVQDDVAFGLENIGVP----------RE----------EM--------------VERVDQALRQVGMEDFLNREPHR-- 140 (279)
T ss_pred ccHHHHHhhhHhhCCCC----------HH----------HH--------------HHHHHHHHHHcCChhhhhCCccc--
Confidence 89999998764322110 00 00 01245678889998887777654
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++. .+|++++|++
T Consensus 141 ---LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~-~~~-~~d~i~~l~~ 215 (279)
T PRK13635 141 ---LSGGQKQRVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLD-EAA-QADRVIVMNK 215 (279)
T ss_pred ---CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHH-HHH-cCCEEEEEEC
Confidence 99999999999999999999999999999999999999999999998755889999888765 444 5999999999
Q ss_pred CeEEEecChhHHHH---HHHhcCCCCC
Q 045902 422 GEIVYQGPREYVLD---FFESVGFRCP 445 (1472)
Q Consensus 422 G~iv~~G~~~~~~~---~F~~~G~~cp 445 (1472)
|++++.|+.+++.. .+...|..+|
T Consensus 216 G~i~~~g~~~~~~~~~~~~~~~~~~~~ 242 (279)
T PRK13635 216 GEILEEGTPEEIFKSGHMLQEIGLDVP 242 (279)
T ss_pred CEEEEECCHHHHhcCHHHHHHcCCCCC
Confidence 99999999887653 3444455544
No 249
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2e-34 Score=331.87 Aligned_cols=211 Identities=23% Similarity=0.331 Sum_probs=175.6
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.++ ++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 7 ~l~i~~l~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~ 71 (265)
T PRK10253 7 RLRGEQLTLGYG-------------KYTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMT--PAHGHVWLDGEHI 71 (265)
T ss_pred EEEEEEEEEEEC-------------CEEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCC--CCCcEEEECCEEh
Confidence 567788776652 3469999999999999999999999999999999999876 3589999999875
Q ss_pred Ch---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC------CCc--hHHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 957 KQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR------LPK--DMFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 957 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~------~~~--~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
.. ...++.++|++|++.+++..|++|++.+..... ... +..++++++.+++.+..++. +..|||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~ 146 (265)
T PRK10253 72 QHYASKEVARRIGLLAQNATTPGDITVQELVARGRYPHQPLFTRWRKEDEEAVTKAMQATGITHLADQS-----VDTLSG 146 (265)
T ss_pred hhCCHHHHhhheEEeeccCcCCCCCcHHHHHHhCcccccccccCCCHHHHHHHHHHHHHcCCHHHhcCC-----cccCCh
Confidence 32 234457899999999888999999997642111 111 13467788888887665554 347999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ ++.+.+|++++|.+ |++++
T Consensus 147 Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~ 224 (265)
T PRK10253 147 GQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALRE-GKIVA 224 (265)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999864 899999999976 57889999999985 78888
Q ss_pred EcCCC
Q 045902 1105 AGPLG 1109 (1472)
Q Consensus 1105 ~g~~~ 1109 (1472)
.|+..
T Consensus 225 ~g~~~ 229 (265)
T PRK10253 225 QGAPK 229 (265)
T ss_pred eCCHH
Confidence 88864
No 250
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-34 Score=331.44 Aligned_cols=197 Identities=26% Similarity=0.388 Sum_probs=164.5
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeEEeccCCCC-CC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-----ETFARISGYCEQNDIH-SP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-----~~~~~~~gyv~Q~~~~-~~ 976 (1472)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.. +.
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~~ 91 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLR--PQKGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQIF 91 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC--CCccEEEECCEEcccccCCHHHHHhheEEEeeChhhccc
Confidence 469999999999999999999999999999999999876 458999999987531 2345678999999753 34
Q ss_pred CCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 977 NVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
..|+.||+.+...... ... ..++++++.+++.+..++. +..||||||||++||++|+.+|++|+|||||+|
T Consensus 92 ~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrl~laraL~~~p~lllLDEPt~~ 166 (271)
T PRK13638 92 YTDIDSDIAFSLRNLGVPEAEITRRVDEALTLVDAQHFRHQP-----IQCLSHGQKKRVAIAGALVLQARYLLLDEPTAG 166 (271)
T ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCHhHhcCC-----chhCCHHHHHHHHHHHHHHcCCCEEEEeCCccc
Confidence 5689999987543321 211 3356778888887766654 347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+.++..+.+.|++++++|.|||+++|+++ ++.+.+|++++|.+ |+++..|+.
T Consensus 167 LD~~~~~~l~~~l~~~~~~g~tii~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 220 (271)
T PRK13638 167 LDPAGRTQMIAIIRRIVAQGNHVIISSHDID-LIYEISDAVYVLRQ-GQILTHGAP 220 (271)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999877999999999976 46678999999985 788888875
No 251
>cd03268 ABC_BcrA_bacitracin_resist The BcrA subfamily represents ABC transporters involved in peptide antibiotic resistance. Bacitracin is a dodecapeptide antibiotic produced by B. licheniformis and B. subtilis. The synthesis of bacitracin is non-ribosomally catalyzed by a multienzyme complex BcrABC. Bacitracin has potent antibiotic activity against gram-positive bacteria. The inhibition of peptidoglycan biosynthesis is the best characterized bacterial effect of bacitracin. The bacitracin resistance of B. licheniformis is mediated by the ABC transporter Bcr which is composed of two identical BcrA ATP-binding subunits and one each of the integral membrane proteins, BcrB and BcrC. B. subtilis cells carrying bcr genes on high-copy number plasmids develop collateral detergent sensitivity, a similar phenomenon in human cells with overexpressed multi-drug resistance P-glycoprotein.
Probab=100.00 E-value=2.6e-34 Score=319.26 Aligned_cols=195 Identities=27% Similarity=0.398 Sum_probs=165.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-CCceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-PQRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV 264 (1472)
+++|+|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|+++.... .++.++|++|++.+++.+||
T Consensus 13 ~~~l~~~~~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (208)
T cd03268 13 KRVLDDISLHVKKGEIYGFLGPNGAGKTTTMKIILGLIKPD---SGEITFDGKSYQKNIEALRRIGALIEAPGFYPNLTA 89 (208)
T ss_pred eEeEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCCcccchHHHHhhEEEecCCCccCccCcH
Confidence 46999999999999999999999999999999999999887 999999998775421 13579999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.+.....+. . ...++.+++.+||++..++.++.
T Consensus 90 ~e~l~~~~~~~~~----------~----------------------------~~~~~~~l~~~~l~~~~~~~~~~----- 126 (208)
T cd03268 90 RENLRLLARLLGI----------R----------------------------KKRIDEVLDVVGLKDSAKKKVKG----- 126 (208)
T ss_pred HHHHHHHHHhcCC----------c----------------------------HHHHHHHHHHcCCHHHHhhhHhh-----
Confidence 9999875432110 0 00134567888998777766654
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++. ++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~~-~~~~~~d~v~~l~~g~i 204 (208)
T cd03268 127 FSLGMKQRLGIALALLGNPDLLILDEPTNGLDPDGIKELRELILSLRD-QGITVLISSHLLS-EIQKVADRIGIINKGKL 204 (208)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEcCCHH-HHHHhcCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999876 5788888877654 67789999999999999
Q ss_pred EEec
Q 045902 425 VYQG 428 (1472)
Q Consensus 425 v~~G 428 (1472)
++.|
T Consensus 205 ~~~g 208 (208)
T cd03268 205 IEEG 208 (208)
T ss_pred EecC
Confidence 8765
No 252
>PRK00349 uvrA excinuclease ABC subunit A; Reviewed
Probab=100.00 E-value=7.6e-33 Score=358.35 Aligned_cols=123 Identities=22% Similarity=0.309 Sum_probs=101.1
Q ss_pred CCCHHHHHHHHHHcCCCchHHHHHHHHHcccccc-cccccCCCCCCCCCHHHHHHHHHHHHHhhCC---CCccccCCCCC
Q 045902 977 NVTIYESLLYSAWLRLPKDMFVEEVMELVEMKAL-RNSLVGLPGVDGLSTEQRKRLTIAVELVANP---SIIFMDEPTSG 1052 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~-~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p---~il~LDEPTsg 1052 (1472)
.+|+.|++.|...+.. -....+.++.++|..+ .+.. ...||||||||+.||++|+.+| ++++|||||+|
T Consensus 791 ~ltv~E~l~~f~~~~~--i~~~l~~L~~vgL~~l~l~~~-----~~tLSgGEkQRl~LAraL~~~p~~~~llILDEPtsG 863 (943)
T PRK00349 791 DMTVEEALEFFEAIPK--IARKLQTLVDVGLGYIKLGQP-----ATTLSGGEAQRVKLAKELSKRSTGKTLYILDEPTTG 863 (943)
T ss_pred cCcHHHHHHHHHhchh--hhHHHHHHHHCCCCcccccCC-----cccCCHHHHHHHHHHHHHhcCCCCCeEEEEECCCCC
Confidence 3789999888654421 2234567777787653 3333 3479999999999999999999 99999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEe-----cCcEEEEEcCC
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGHVIYAGPL 1108 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~-----~gg~v~~~g~~ 1108 (1472)
||+.+...+++.|+++.++|.|||+++|+++ ..+.+|+++.|. +||++++.|+.
T Consensus 864 LD~~~~~~L~~~L~~l~~~G~TVIiitH~~~--~i~~aD~ii~Lgp~~G~~~G~Iv~~Gt~ 922 (943)
T PRK00349 864 LHFEDIRKLLEVLHRLVDKGNTVVVIEHNLD--VIKTADWIIDLGPEGGDGGGEIVATGTP 922 (943)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEecCHH--HHHhCCEEEEecCCcCCCCCEEEEeCCH
Confidence 9999999999999999888999999999975 456899999994 57899999975
No 253
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-34 Score=331.40 Aligned_cols=210 Identities=23% Similarity=0.375 Sum_probs=172.7
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.++ ++..+|+||||++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.+..
T Consensus 4 l~~~~l~~~~~------------~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 69 (277)
T PRK13652 4 IETRDLCYSYS------------GSKEALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILK--PTSGSVLIRGEPIT 69 (277)
T ss_pred EEEEEEEEEeC------------CCCceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEECC
Confidence 55677766542 12359999999999999999999999999999999999876 45899999998754
Q ss_pred h---hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHH
Q 045902 958 Q---ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRK 1029 (1472)
Q Consensus 958 ~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrq 1029 (1472)
. ...++.+||++|++. .+...||.||+.+..... ...+ ..++++++.+++.+..++.. ..|||||||
T Consensus 70 ~~~~~~~~~~i~~v~q~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~Gq~q 144 (277)
T PRK13652 70 KENIREVRKFVGLVFQNPDDQIFSPTVEQDIAFGPINLGLDEETVAHRVSSALHMLGLEELRDRVP-----HHLSGGEKK 144 (277)
T ss_pred cCCHHHHHhheEEEecCcccccccccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHHHH
Confidence 2 234567899999973 344689999998765432 2221 34677888888876666553 479999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1030 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1030 Rl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|++||+||+.+|++|+|||||+|||+.++..+.+.|+++.++ |+|||++||+++ ++.+.+|++++|++ |++++.|+.
T Consensus 145 rl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~-G~i~~~g~~ 222 (277)
T PRK13652 145 RVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDK-GRIVAYGTV 222 (277)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CeEEEECCH
Confidence 999999999999999999999999999999999999999875 899999999976 46789999999986 789998875
No 254
>TIGR03864 PQQ_ABC_ATP ABC transporter, ATP-binding subunit, PQQ-dependent alcohol dehydrogenase system. Members of this protein family are the ATP-binding subunit of an ABC transporter system that is associated with PQQ biosynthesis and PQQ-dependent alcohol dehydrogenases. While this family shows homology to several efflux ABC transporter subunits, the presence of a periplasmic substrate-binding protein and association with systems for catabolism of alcohols suggests a role in import rather than detoxification.
Probab=100.00 E-value=6.5e-34 Score=322.20 Aligned_cols=206 Identities=26% Similarity=0.383 Sum_probs=171.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC--CceEEEEcCCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP--QRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~--~~~~~yv~Q~d~~~~~lT 263 (1472)
+.+|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... .+.++|++|++.+++.+|
T Consensus 14 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~i~~~~~~~~~~i~~~~q~~~~~~~~t 90 (236)
T TIGR03864 14 RRALDDVSFTVRPGEFVALLGPNGAGKSTLFSLLTRLYVAQ---EGQISVAGHDLRRAPRAALARLGVVFQQPTLDLDLS 90 (236)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcccCChhhhhhEEEeCCCCCCcccCc
Confidence 46999999999999999999999999999999999999887 8999999998764322 247999999998889999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.+.....+.. ..+ . ...++.+++.+||++..++.+++
T Consensus 91 ~~~~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~gl~~~~~~~~~~---- 132 (236)
T TIGR03864 91 VRQNLRYHAALHGLS----------RAE----------A--------------RERIAALLARLGLAERADDKVRE---- 132 (236)
T ss_pred HHHHHHHHHHhcCCC----------HHH----------H--------------HHHHHHHHHHcCChhhhcCChhh----
Confidence 999998754322100 000 0 00134578889998877776654
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++. .+|++++|++|+
T Consensus 133 -LS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~-~~d~i~~l~~G~ 209 (236)
T TIGR03864 133 -LNGGHRRRVEIARALLHRPALLLLDEPTVGLDPASRAAIVAHVRALCRDQGLSVLWATHLVD-EIE-ADDRLVVLHRGR 209 (236)
T ss_pred -CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecChh-hHh-hCCEEEEEeCCe
Confidence 99999999999999999999999999999999999999999999997655789988888765 444 599999999999
Q ss_pred EEEecChhHHHH
Q 045902 424 IVYQGPREYVLD 435 (1472)
Q Consensus 424 iv~~G~~~~~~~ 435 (1472)
+++.|+.+++..
T Consensus 210 i~~~~~~~~~~~ 221 (236)
T TIGR03864 210 VLADGAAAELRG 221 (236)
T ss_pred EEEeCCHHHHHH
Confidence 999999877643
No 255
>PRK13647 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.4e-34 Score=329.35 Aligned_cols=203 Identities=24% Similarity=0.308 Sum_probs=169.1
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCC-CCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDL-HHGEM 262 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 262 (1472)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .++.+
T Consensus 19 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 95 (274)
T PRK13647 19 KALKGLSLSIPEGSKTALLGPNGAGKSTLLLHLNGIYLPQ---RGRVKVMGREVNAENEKWVRSKVGLVFQDPDDQVFSS 95 (274)
T ss_pred eeeeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---ceEEEECCEECCCCCHHHHHhhEEEEecChhhhhccC
Confidence 5899999999999999999999999999999999999887 8999999998865432 356999999863 45678
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||+||+.|.....+.. +. +. ...++.+++.+||.+..++.+.+
T Consensus 96 tv~e~l~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~~L~~~~~~~~~~--- 138 (274)
T PRK13647 96 TVWDDVAFGPVNMGLD----------KD----------EV--------------ERRVEEALKAVRMWDFRDKPPYH--- 138 (274)
T ss_pred cHHHHHHhhHHHcCCC----------HH----------HH--------------HHHHHHHHHHCCCHHHhcCChhh---
Confidence 9999998754321110 00 00 00135678899998877777654
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
|||||||||+||+||+.+|++|+|||||+|||+.++.++.+.|+++++ .+.|++++.|++ .++.+++|+|++|++|
T Consensus 139 --LSgG~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~tili~tH~~-~~~~~~~d~i~~l~~G 214 (274)
T PRK13647 139 --LSYGQKKRVAIAGVLAMDPDVIVLDEPMAYLDPRGQETLMEILDRLHN-QGKTVIVATHDV-DLAAEWADQVIVLKEG 214 (274)
T ss_pred --CCHHHHHHHHHHHHHHcCCCEEEEECCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEEECC
Confidence 999999999999999999999999999999999999999999999976 488988887764 4677899999999999
Q ss_pred eEEEecChhHH
Q 045902 423 EIVYQGPREYV 433 (1472)
Q Consensus 423 ~iv~~G~~~~~ 433 (1472)
++++.|+++++
T Consensus 215 ~i~~~g~~~~~ 225 (274)
T PRK13647 215 RVLAEGDKSLL 225 (274)
T ss_pred EEEEECCHHHh
Confidence 99999998654
No 256
>PRK13631 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=332.56 Aligned_cols=216 Identities=22% Similarity=0.368 Sum_probs=172.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCC-------------------CCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEF-------------------VPQ 246 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~-------------------~~~ 246 (1472)
+++|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|.++|.++.+. ..+
T Consensus 39 ~~~L~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~L~Gl~~p~---~G~I~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (320)
T PRK13631 39 LVALNNISYTFEKNKIYFIIGNSGSGKSTLVTHFNGLIKSK---YGTIQVGDIYIGDKKNNHELITNPYSKKIKNFKELR 115 (320)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCEEcccccccccccccccccccchHHHHH
Confidence 45999999999999999999999999999999999999987 89999999887542 113
Q ss_pred ceEEEEcCCC--CCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHH
Q 045902 247 RTCAYISQHD--LHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVL 324 (1472)
Q Consensus 247 ~~~~yv~Q~d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il 324 (1472)
+.++||+|++ .+++ .||+||+.|+....+.. .. +. ...++.++
T Consensus 116 ~~ig~v~Q~~~~~l~~-~tv~eni~~~~~~~~~~----------~~----------~~--------------~~~~~~~l 160 (320)
T PRK13631 116 RRVSMVFQFPEYQLFK-DTIEKDIMFGPVALGVK----------KS----------EA--------------KKLAKFYL 160 (320)
T ss_pred hcEEEEEECchhcccc-chHHHHHHhhHHhcCCC----------HH----------HH--------------HHHHHHHH
Confidence 5799999986 4554 59999998864321110 00 00 00134578
Q ss_pred HHhCCc-ccccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEe
Q 045902 325 KILGLD-ICADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLL 403 (1472)
Q Consensus 325 ~~lgL~-~~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~ 403 (1472)
+.+||+ ...++.+ ..|||||||||+|||||+.+|++|+|||||+|||+.++.++.+.|+++.+ .+.|+|++.|
T Consensus 161 ~~~gL~~~~~~~~~-----~~LSgGqkqRvaiAraL~~~p~iLLLDEPtsgLD~~~~~~l~~~L~~l~~-~g~TiiivtH 234 (320)
T PRK13631 161 NKMGLDDSYLERSP-----FGLSGGQKRRVAIAGILAIQPEILIFDEPTAGLDPKGEHEMMQLILDAKA-NNKTVFVITH 234 (320)
T ss_pred HHcCCChhHhcCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEec
Confidence 889996 4555444 45999999999999999999999999999999999999999999999875 5889888877
Q ss_pred cCcchHHhccCeEEEecCCeEEEecChhHHH---HHHHhcCCCCCC
Q 045902 404 QPAPETYDLFDDIILLSEGEIVYQGPREYVL---DFFESVGFRCPE 446 (1472)
Q Consensus 404 q~~~~~~~~fD~iilL~~G~iv~~G~~~~~~---~~F~~~G~~cp~ 446 (1472)
++ .++.+++|+|++|++|++++.|+++++. +.++..|..+|.
T Consensus 235 d~-~~~~~~adri~vl~~G~i~~~g~~~~~~~~~~~~~~~~~~~p~ 279 (320)
T PRK13631 235 TM-EHVLEVADEVIVMDKGKILKTGTPYEIFTDQHIINSTSIQVPR 279 (320)
T ss_pred CH-HHHHHhCCEEEEEECCEEEEeCCHHHHhcCHHHHHHcCCCCCh
Confidence 65 3677899999999999999999998764 234445555544
No 257
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.3e-34 Score=327.26 Aligned_cols=214 Identities=22% Similarity=0.322 Sum_probs=171.4
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISGY 954 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G~ 954 (1472)
+.++|+++.+ +++.+|+|+|++|++||++||+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 5 l~i~~v~~~~-------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~ 71 (258)
T PRK14241 5 IDVKDLNIYY-------------GSFHAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGE 71 (258)
T ss_pred EEEeeEEEEE-------------CCEeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCE
Confidence 5667776654 2246999999999999999999999999999999999986532 25899999998
Q ss_pred cCC-----hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cch---HHHHHHHHHccccc-ccccccCCCCCCCC
Q 045902 955 PKK-----QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMKA-LRNSLVGLPGVDGL 1023 (1472)
Q Consensus 955 ~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~~-~~~~~~~~~~~~~L 1023 (1472)
++. ....++.++|++|+..+++.+||+||+.+....+. +.. +.++++++.+++.. +.+... ..+..|
T Consensus 72 ~~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~--~~~~~L 149 (258)
T PRK14241 72 DLYGPGVDPVAVRRTIGMVFQRPNPFPTMSIRDNVVAGLKLNGVRNKKDLDELVEKSLRGANLWNEVKDRLD--KPGGGL 149 (258)
T ss_pred eccccccChHHHhcceEEEccccccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhHhh--CCcccC
Confidence 753 12345679999999999999999999987654322 111 34566777777632 111111 123579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEe-----c
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----R 1098 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~-----~ 1098 (1472)
||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|. +
T Consensus 150 S~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tviivsH~~~-~~~~~~d~i~~l~~~~~~~ 227 (258)
T PRK14241 150 SGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ-DYTIVIVTHNMQ-QAARVSDQTAFFNLEATGK 227 (258)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccCCC
Confidence 99999999999999999999999999999999999999999999964 689999999976 4678899999997 2
Q ss_pred CcEEEEEcCC
Q 045902 1099 GGHVIYAGPL 1108 (1472)
Q Consensus 1099 gg~v~~~g~~ 1108 (1472)
.|++++.|+.
T Consensus 228 ~g~i~~~~~~ 237 (258)
T PRK14241 228 PGRLVEIDDT 237 (258)
T ss_pred CceEEecCCH
Confidence 5899998875
No 258
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-34 Score=325.47 Aligned_cols=214 Identities=22% Similarity=0.308 Sum_probs=169.5
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCC---CCCeeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRK---TGGYIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~---~~~~~~G~i~i~G 953 (1472)
.+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|.. ++.+.+|+|.++|
T Consensus 3 ~l~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 69 (250)
T PRK14245 3 KIDARDVNFWY-------------GDFHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPATRLEGEIRIDG 69 (250)
T ss_pred EEEEEEEEEEE-------------CCEeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCCCCceEEEECC
Confidence 45677776554 2346999999999999999999999999999999999962 2212489999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cc----hHHHHHHHHHcccccccccccCCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PK----DMFVEEVMELVEMKALRNSLVGLPGVDGL 1023 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~----~~~~~~v~~~l~l~~~~~~~~~~~~~~~L 1023 (1472)
.++.. ...++.++|++|++.+++ .|+.||+.+....+. .. +..++++++.+++.+..+..... .+..|
T Consensus 70 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~L 147 (250)
T PRK14245 70 RNIYDKGVQVDELRKNVGMVFQRPNPFP-KSIFENVAYGLRVNGVKDNAFIRQRVEETLKGAALWDEVKDKLKE-SAFAL 147 (250)
T ss_pred EecccccccHHHHhhheEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCcchhhhhhC-CcccC
Confidence 87642 234567999999988876 599999987654332 11 13456777777775321111111 24579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |+++
T Consensus 148 S~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiiivtH~~~-~~~~~~d~v~~l~~-G~~~ 224 (250)
T PRK14245 148 SGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELK-KDYTIVIVTHNMQ-QAARVSDKTAFFYM-GEMV 224 (250)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhCCEEEEEEC-CEEE
Confidence 9999999999999999999999999999999999999999999995 4799999999986 46788999999985 7899
Q ss_pred EEcCC
Q 045902 1104 YAGPL 1108 (1472)
Q Consensus 1104 ~~g~~ 1108 (1472)
+.|+.
T Consensus 225 ~~~~~ 229 (250)
T PRK14245 225 EYDDT 229 (250)
T ss_pred EECCH
Confidence 99875
No 259
>PRK13635 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.9e-34 Score=331.26 Aligned_cols=210 Identities=28% Similarity=0.370 Sum_probs=173.5
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+.. ..+.+|+|+|++|++||++||+||||||||||+++|+|..++ .+|+|.++|.++.
T Consensus 6 l~~~~l~~~~~~-----------~~~~~l~~vsl~i~~Ge~~~i~G~nGaGKSTLl~~i~G~~~p--~~G~i~~~g~~i~ 72 (279)
T PRK13635 6 IRVEHISFRYPD-----------AATYALKDVSFSVYEGEWVAIVGHNGSGKSTLAKLLNGLLLP--EAGTITVGGMVLS 72 (279)
T ss_pred EEEEEEEEEeCC-----------CCccceeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCC--CCcEEEECCEECC
Confidence 667777765421 124599999999999999999999999999999999998774 5899999998764
Q ss_pred h---hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHH
Q 045902 958 Q---ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRK 1029 (1472)
Q Consensus 958 ~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrq 1029 (1472)
. ...++.+||++|++. .++..||.||+.+..... .+.. ..++++++.+++.+..++.. ..|||||||
T Consensus 73 ~~~~~~~~~~i~~~~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~~q 147 (279)
T PRK13635 73 EETVWDVRRQVGMVFQNPDNQFVGATVQDDVAFGLENIGVPREEMVERVDQALRQVGMEDFLNREP-----HRLSGGQKQ 147 (279)
T ss_pred cCcHHHHhhheEEEEeCHHHhcccccHHHHHhhhHhhCCCCHHHHHHHHHHHHHHcCChhhhhCCc-----ccCCHHHHH
Confidence 3 234567999999973 667789999998765432 1222 34677788888877666553 479999999
Q ss_pred HHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1030 RLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1030 Rl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|++||++|+.+|+||+|||||+|||+.++..+++.|++++++ |+|||++||+++. + ..+|++++|.+ |++++.|+.
T Consensus 148 rv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~~~~~tilivsH~~~~-~-~~~d~i~~l~~-G~i~~~g~~ 224 (279)
T PRK13635 148 RVAIAGVLALQPDIIILDEATSMLDPRGRREVLETVRQLKEQKGITVLSITHDLDE-A-AQADRVIVMNK-GEILEEGTP 224 (279)
T ss_pred HHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHcCCCEEEEEecCHHH-H-HcCCEEEEEEC-CEEEEECCH
Confidence 999999999999999999999999999999999999999876 8999999999763 4 46999999985 789999875
No 260
>PRK10070 glycine betaine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.6e-34 Score=344.30 Aligned_cols=199 Identities=23% Similarity=0.285 Sum_probs=169.2
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hc----ccceeEEeccCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ET----FARISGYCEQNDIH 974 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~----~~~~~gyv~Q~~~~ 974 (1472)
...+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. .. .++.+||++|+..+
T Consensus 40 ~~~~L~~isl~i~~Gei~~LvG~NGsGKSTLLr~I~Gl~~--p~sG~I~i~G~~i~~~~~~~l~~~~~~~igyv~Q~~~l 117 (400)
T PRK10070 40 LSLGVKDASLAIEEGEIFVIMGLSGSGKSTMVRLLNRLIE--PTRGQVLIDGVDIAKISDAELREVRRKKIAMVFQSFAL 117 (400)
T ss_pred CeEEEEeEEEEEcCCCEEEEECCCCchHHHHHHHHHcCCC--CCCCEEEECCEECCcCCHHHHHHHHhCCEEEEECCCcC
Confidence 3468999999999999999999999999999999999877 458999999987642 11 23568999999999
Q ss_pred CCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 045902 975 SPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1050 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPT 1050 (1472)
++.+||+||+.+....+. +.. +.++++++.+++.+..++.. ..|||||||||+|||||+.+|++|+|||||
T Consensus 118 ~~~~Tv~enl~~~~~~~~~~~~~~~~~~~e~L~~~gL~~~~~~~~-----~~LSgGq~QRv~LArAL~~~P~iLLLDEPt 192 (400)
T PRK10070 118 MPHMTVLDNTAFGMELAGINAEERREKALDALRQVGLENYAHSYP-----DELSGGMRQRVGLARALAINPDILLMDEAF 192 (400)
T ss_pred CCCCCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhcCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEECCC
Confidence 999999999998765432 222 34567788888877666543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1051 SGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1051 sgLD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+|||+.++..+++.|+++.+ .|+|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 193 s~LD~~~r~~l~~~L~~l~~~~g~TIIivTHd~~-~~~~~~Dri~vL~~-G~i~~~g~~~ 250 (400)
T PRK10070 193 SALDPLIRTEMQDELVKLQAKHQRTIVFISHDLD-EAMRIGDRIAIMQN-GEVVQVGTPD 250 (400)
T ss_pred ccCCHHHHHHHHHHHHHHHHHCCCeEEEEECCHH-HHHHhCCEEEEEEC-CEEEecCCHH
Confidence 99999999999999999975 4899999999976 57788999999985 7898888753
No 261
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=5.2e-34 Score=312.82 Aligned_cols=190 Identities=49% Similarity=0.853 Sum_probs=160.5
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCC--CCCeeEEEEEEcCc
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRK--TGGYIEGSISISGY 954 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~--~~~~~~G~i~i~G~ 954 (1472)
.+.++|+++.++... ....+.+|+|+|+++++||+++|+||||||||||+++|+|.. + +.+|+|.++|.
T Consensus 3 ~l~~~~ls~~~~~~~-------~~~~~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~--~~~G~i~~~g~ 73 (194)
T cd03213 3 TLSFRNLTVTVKSSP-------SKSGKQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGL--GVSGEVLINGR 73 (194)
T ss_pred EEEEEeeEEEEecCC-------CcccccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC--CCceEEEECCE
Confidence 366777776653100 001246999999999999999999999999999999999987 5 45899999999
Q ss_pred cCChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHH
Q 045902 955 PKKQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIA 1034 (1472)
Q Consensus 955 ~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA 1034 (1472)
+......++.++|++|++.+++.+|+.||+.+..... .||||||||++||
T Consensus 74 ~~~~~~~~~~i~~~~q~~~~~~~~t~~~~i~~~~~~~------------------------------~LS~G~~qrv~la 123 (194)
T cd03213 74 PLDKRSFRKIIGYVPQDDILHPTLTVRETLMFAAKLR------------------------------GLSGGERKRVSIA 123 (194)
T ss_pred eCchHhhhheEEEccCcccCCCCCcHHHHHHHHHHhc------------------------------cCCHHHHHHHHHH
Confidence 8754445677999999998889999999997643110 4999999999999
Q ss_pred HHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1035 VELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1035 ~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
|+|+.+|++++|||||+|||+.++..+.+.|+++.++|+|||+++|+++.++.+.+|++++|++ |++++.|
T Consensus 124 ral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~tiii~sh~~~~~~~~~~d~v~~l~~-G~i~~~~ 194 (194)
T cd03213 124 LELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLADTGRTIICSIHQPSSEIFELFDKLLLLSQ-GRVIYFG 194 (194)
T ss_pred HHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHhCCCEEEEEecCchHHHHHhcCEEEEEeC-CEEEecC
Confidence 9999999999999999999999999999999999877999999999986567788999999986 6777653
No 262
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=333.39 Aligned_cols=213 Identities=19% Similarity=0.220 Sum_probs=170.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEEcCeeCCCCCC-------CceEEEEcCCC-
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSL-RVSGRVTYCGHELTEFVP-------QRTCAYISQHD- 256 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d- 256 (1472)
..+|+|||++|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++
T Consensus 20 ~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~i~~~~~~~~~~~r~~~i~~v~Q~~~ 99 (326)
T PRK11022 20 FRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISEKERRNLVGAEVAMIFQDPM 99 (326)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCch
Confidence 569999999999999999999999999999999999987422 138999999999866532 13699999997
Q ss_pred -CCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccc
Q 045902 257 -LHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADI 335 (1472)
Q Consensus 257 -~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt 335 (1472)
.+.|.+||.+++....+.... ..+.+. ...++.+++.+||++..+.
T Consensus 100 ~~l~p~~~v~~~i~~~l~~~~~---------~~~~~~------------------------~~~~~~~L~~~gL~~~~~~ 146 (326)
T PRK11022 100 TSLNPCYTVGFQIMEAIKVHQG---------GNKKTR------------------------RQRAIDLLNQVGIPDPASR 146 (326)
T ss_pred hhcCCcCCHHHHHHHHHHHhcC---------CCHHHH------------------------HHHHHHHHHHCCCCChHHH
Confidence 478999999998664332100 000000 0123557888999742111
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
-+.....|||||||||+||+||+.+|++|++||||+|||..++.++++.|+++.+..+.|+|++.|+. ..+.+++|+
T Consensus 147 --l~~~p~~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl-~~~~~~adr 223 (326)
T PRK11022 147 --LDVYPHQLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDL-ALVAEAAHK 223 (326)
T ss_pred --HhCCchhCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCE
Confidence 12345569999999999999999999999999999999999999999999999876788888887665 467789999
Q ss_pred EEEecCCeEEEecChhHHH
Q 045902 416 IILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~ 434 (1472)
|++|++|++++.|+.+++.
T Consensus 224 i~vm~~G~ive~g~~~~~~ 242 (326)
T PRK11022 224 IIVMYAGQVVETGKAHDIF 242 (326)
T ss_pred EEEEECCEEEEECCHHHHh
Confidence 9999999999999998875
No 263
>cd03226 ABC_cobalt_CbiO_domain2 Domain II of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. The CbiMNQO family ABC transport system is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.5e-34 Score=318.59 Aligned_cols=192 Identities=27% Similarity=0.331 Sum_probs=160.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCC-CCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDL-HHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~-~~~~lTV 264 (1472)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.....++.++|++|++. .+..+||
T Consensus 13 ~~~l~~v~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~~tv 89 (205)
T cd03226 13 TEILDDLSLDLYAGEIIALTGKNGAGKTTLAKILAGLIKES---SGSILLNGKPIKAKERRKSIGYVMQDVDYQLFTDSV 89 (205)
T ss_pred CceeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEhhhHHhhcceEEEecChhhhhhhccH
Confidence 46999999999999999999999999999999999999887 8999999998754323457999999974 3457899
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.+.....+ .. ...++.+++.+||++..++.++ .
T Consensus 90 ~e~l~~~~~~~~----------------------~~----------------~~~~~~~l~~~~l~~~~~~~~~-----~ 126 (205)
T cd03226 90 REELLLGLKELD----------------------AG----------------NEQAETVLKDLDLYALKERHPL-----S 126 (205)
T ss_pred HHHHhhhhhhcC----------------------cc----------------HHHHHHHHHHcCCchhcCCCch-----h
Confidence 999987532110 00 0013457889999887777665 4
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++. ++.+++|++++|++|++
T Consensus 127 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sH~~~-~~~~~~d~i~~l~~G~i 204 (205)
T cd03226 127 LSGGQKQRLAIAAALLSGKDLLIFDEPTSGLDYKNMERVGELIRELAA-QGKAVIVITHDYE-FLAKVCDRVLLLANGAI 204 (205)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCCccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCHH-HHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999875 4788888887654 67789999999999997
Q ss_pred E
Q 045902 425 V 425 (1472)
Q Consensus 425 v 425 (1472)
+
T Consensus 205 v 205 (205)
T cd03226 205 V 205 (205)
T ss_pred C
Confidence 5
No 264
>COG1245 Predicted ATPase, RNase L inhibitor (RLI) homolog [General function prediction only]
Probab=100.00 E-value=3.8e-33 Score=317.62 Aligned_cols=170 Identities=25% Similarity=0.326 Sum_probs=139.7
Q ss_pred ceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHHHHHHHH
Q 045902 909 VSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYESLLYSA 988 (1472)
Q Consensus 909 vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~ 988 (1472)
=.++|..||+++++||||-||||+.++|+|..++ .+|. .. .-.++|-||--.--...||++.|.-..
T Consensus 360 ~~G~i~~gEvigilGpNgiGKTTFvk~LAG~ikP--deg~----~~-------~~~vSyKPQyI~~~~~gtV~~~l~~~~ 426 (591)
T COG1245 360 EEGEIYDGEVIGILGPNGIGKTTFVKLLAGVIKP--DEGS----EE-------DLKVSYKPQYISPDYDGTVEDLLRSAI 426 (591)
T ss_pred cCCeeecceEEEEECCCCcchHHHHHHHhccccC--CCCC----Cc-------cceEeecceeecCCCCCcHHHHHHHhh
Confidence 3478889999999999999999999999998774 3665 11 124688899766667889999886544
Q ss_pred HcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHH
Q 045902 989 WLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNT 1068 (1472)
Q Consensus 989 ~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l 1068 (1472)
.-+........|+.+-|.|..+.++.+ .+|||||.|||+||.+|..++++.+||||++.||++.+..+-+.||+.
T Consensus 427 ~~~~~~s~~~~ei~~pl~l~~i~e~~v-----~~LSGGELQRvaIaa~L~reADlYllDEPSA~LDvEqR~~vakvIRR~ 501 (591)
T COG1245 427 RSAFGSSYFKTEIVKPLNLEDLLERPV-----DELSGGELQRVAIAAALSREADLYLLDEPSAYLDVEQRIIVAKVIRRF 501 (591)
T ss_pred hhhcccchhHHhhcCccchHHHHhccc-----ccCCchhHHHHHHHHHhccccCEEEecCchhhccHHHHHHHHHHHHHH
Confidence 333344467789999999999888775 479999999999999999999999999999999999999999999999
Q ss_pred hhC-CCEEEEEecCccHHHHHhhCeEEEEe
Q 045902 1069 VDT-GRTVVCTIHQPSIDIFEAFDELFLMK 1097 (1472)
Q Consensus 1069 ~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~ 1097 (1472)
... ++|.+++-||..+ +--..||+++..
T Consensus 502 ~e~~~kta~vVdHDi~~-~dyvsDr~ivF~ 530 (591)
T COG1245 502 IENNEKTALVVDHDIYM-IDYVSDRLIVFE 530 (591)
T ss_pred HhhcCceEEEEecceeh-hhhhhceEEEEe
Confidence 854 7899999999653 334568888775
No 265
>PRK13651 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.9e-34 Score=332.65 Aligned_cols=205 Identities=22% Similarity=0.328 Sum_probs=167.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCC----------------------
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEF---------------------- 243 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~---------------------- 243 (1472)
..+|+|+|+.|++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+....
T Consensus 20 ~~~l~~vsl~i~~Ge~v~iiG~nGsGKSTLl~~L~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 96 (305)
T PRK13651 20 LKALDNVSVEINQGEFIAIIGQTGSGKTTFIEHLNALLLPD---TGTIEWIFKDEKNKKKTKEKEKVLEKLVIQKTRFKK 96 (305)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCcHHHHHHHHhCCCCCC---CcEEEEeceecccccccccccccccccccccccccc
Confidence 35899999999999999999999999999999999999987 89999998765210
Q ss_pred -----CCCceEEEEcCCC-CCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhcccccc
Q 045902 244 -----VPQRTCAYISQHD-LHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTS 317 (1472)
Q Consensus 244 -----~~~~~~~yv~Q~d-~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (1472)
..++.++||+|++ ..+...||+||+.|+....+.. + .+.+
T Consensus 97 ~~~~~~~~~~ig~v~Q~~~~~l~~~tv~e~i~~~~~~~~~~----------~----------~~~~-------------- 142 (305)
T PRK13651 97 IKKIKEIRRRVGVVFQFAEYQLFEQTIEKDIIFGPVSMGVS----------K----------EEAK-------------- 142 (305)
T ss_pred cchHHHHHhceEEEeeCcccccccccHHHHHHhhHHHcCCC----------H----------HHHH--------------
Confidence 1135799999985 3455679999998864432210 0 0000
Q ss_pred ccHHHHHHHhCCc-ccccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCc
Q 045902 318 LGTDYVLKILGLD-ICADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDV 396 (1472)
Q Consensus 318 ~~~~~il~~lgL~-~~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~ 396 (1472)
..++.+++.+||+ +..|+.+. .|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ .+.
T Consensus 143 ~~~~~~l~~~gL~~~~~~~~~~-----~LSgGqkqrvalA~aL~~~P~lLlLDEPt~~LD~~~~~~l~~~l~~l~~-~g~ 216 (305)
T PRK13651 143 KRAAKYIELVGLDESYLQRSPF-----ELSGGQKRRVALAGILAMEPDFLVFDEPTAGLDPQGVKEILEIFDNLNK-QGK 216 (305)
T ss_pred HHHHHHHHHcCCChhhhhCChh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHH-CCC
Confidence 0135578899996 56676554 4999999999999999999999999999999999999999999999975 588
Q ss_pred EEEEEEecCcchHHhccCeEEEecCCeEEEecChhHHH
Q 045902 397 TMIISLLQPAPETYDLFDDIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 397 tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G~~~~~~ 434 (1472)
|+|++.|+. .++.+++|+|++|++|++++.|+++++.
T Consensus 217 tiiivtHd~-~~~~~~adrv~vl~~G~i~~~g~~~~~~ 253 (305)
T PRK13651 217 TIILVTHDL-DNVLEWTKRTIFFKDGKIIKDGDTYDIL 253 (305)
T ss_pred EEEEEeeCH-HHHHHhCCEEEEEECCEEEEECCHHHHh
Confidence 888877664 4678899999999999999999998864
No 266
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=4.8e-34 Score=318.19 Aligned_cols=194 Identities=23% Similarity=0.307 Sum_probs=163.9
Q ss_pred eeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHHHH
Q 045902 905 LLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIYES 983 (1472)
Q Consensus 905 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~ 983 (1472)
+++|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.+|+.||
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~en 90 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIE--PASGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQN 90 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCcEEEECCEEcccCChhccceEEEeccCccCCCCcHHHH
Confidence 4679999999999999999999999999999999877 358999999987642 2345679999999999999999999
Q ss_pred HHHHHHcCC--C--chHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 045902 984 LLYSAWLRL--P--KDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1059 (1472)
Q Consensus 984 l~~~~~l~~--~--~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~ 1059 (1472)
+.+...... + .+..++++++.+++.+..++.. ..||||||||++||++|+.+|++++|||||+|||+.++.
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~ 165 (213)
T TIGR01277 91 IGLGLHPGLKLNAEQQEKVVDAAQQVGIADYLDRLP-----EQLSGGQRQRVALARCLVRPNPILLLDEPFSALDPLLRE 165 (213)
T ss_pred HHhHhhccCCccHHHHHHHHHHHHHcCcHHHhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHH
Confidence 986533211 1 1235677888888876666543 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcC
Q 045902 1060 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGP 1107 (1472)
Q Consensus 1060 ~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~ 1107 (1472)
.+.+.|+++.++ |+|||+++|+++ ++.+.+|++++|.+ |+++..|+
T Consensus 166 ~~~~~l~~~~~~~~~tii~vsh~~~-~~~~~~d~v~~l~~-g~i~~~~~ 212 (213)
T TIGR01277 166 EMLALVKQLCSERQRTLLMVTHHLS-DARAIASQIAVVSQ-GKIKVVSD 212 (213)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCeEEEEEC-CeEEEecC
Confidence 999999999764 899999999976 46678999999985 78887764
No 267
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=4e-34 Score=364.15 Aligned_cols=209 Identities=28% Similarity=0.425 Sum_probs=174.0
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~ 261 (1472)
++++|+|+|+.++|||.++|+||||||||||+++|.|.++++ +|+|.+||+++++... ++.++||+|++.+|.
T Consensus 341 ~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~~---~G~I~idg~dI~~i~~~~lr~~I~~V~Qd~~LF~- 416 (567)
T COG1132 341 KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDPT---SGEILIDGIDIRDISLDSLRKRIGIVSQDPLLFS- 416 (567)
T ss_pred CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCC---CCeEEECCEehhhcCHHHHHHhccEEcccceeec-
Confidence 346999999999999999999999999999999999999997 8999999999988764 478999999998887
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
.||+|||.++..- ..++++.+..+.+.++ | .+. .|++..||.|| +.
T Consensus 417 ~TI~~NI~~g~~~----------------------at~eei~~a~k~a~~~--------d-~I~--~lp~g~dt~vg-e~ 462 (567)
T COG1132 417 GTIRENIALGRPD----------------------ATDEEIEEALKLANAH--------E-FIA--NLPDGYDTIVG-ER 462 (567)
T ss_pred ccHHHHHhcCCCC----------------------CCHHHHHHHHHHhChH--------H-HHH--hCcccccceec-CC
Confidence 7999999986321 0112333333332211 2 222 34667899999 67
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
+..||||||||++||||++.+|+||+||||||+||+.+...|.+.++++.+ ++|+++..|.+ .+...+|+|++|++
T Consensus 463 G~~LSgGQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~~--~rT~iiIaHRl--sti~~aD~IiVl~~ 538 (567)
T COG1132 463 GVNLSGGQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLLK--GRTTLIIAHRL--STIKNADRIIVLDN 538 (567)
T ss_pred CccCCHHHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHhc--CCEEEEEeccH--hHHHhCCEEEEEEC
Confidence 788999999999999999999999999999999999999999999997763 56888877766 34555999999999
Q ss_pred CeEEEecChhHHHH
Q 045902 422 GEIVYQGPREYVLD 435 (1472)
Q Consensus 422 G~iv~~G~~~~~~~ 435 (1472)
|++++.|+++++..
T Consensus 539 G~i~e~G~h~eLl~ 552 (567)
T COG1132 539 GRIVERGTHEELLA 552 (567)
T ss_pred CEEEEecCHHHHHH
Confidence 99999999999875
No 268
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=332.40 Aligned_cols=207 Identities=20% Similarity=0.273 Sum_probs=172.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCC--C
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHD--L 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d--~ 257 (1472)
..+|+|||+.|++||+++|+|+||||||||+++|+|.++++ +|+|.++|+++..... ++.++||+|++ .
T Consensus 28 ~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p~---~G~i~~~g~~l~~~~~~~~~~~r~~i~~v~Q~~~~~ 104 (327)
T PRK11308 28 VKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETPT---GGELYYQGQDLLKADPEAQKLLRQKIQIVFQNPYGS 104 (327)
T ss_pred eeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCCC---CcEEEECCEEcCcCCHHHHHHHhCCEEEEEcCchhh
Confidence 57999999999999999999999999999999999999886 8999999999865432 35799999997 5
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc-ccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI-CADIM 336 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt~ 336 (1472)
+.|.+||.+++.+..+.... ..+.+. ...+..+++.+||+. ..|+.
T Consensus 105 l~p~~~v~~~l~~~~~~~~~---------~~~~~~------------------------~~~~~~~l~~~gL~~~~~~~~ 151 (327)
T PRK11308 105 LNPRKKVGQILEEPLLINTS---------LSAAER------------------------REKALAMMAKVGLRPEHYDRY 151 (327)
T ss_pred cCCccCHHHHHHHHHHHccC---------CCHHHH------------------------HHHHHHHHHHCCCChHHhcCC
Confidence 88999999999765432110 000000 012356788999963 55655
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 337 VGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 337 vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
+ ..|||||||||+||+||+.+|++|++||||+|||..++.+|++.|+++.+..+.|+|++.|+ ...+.+++|+|
T Consensus 152 p-----~~LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHd-l~~~~~~adrv 225 (327)
T PRK11308 152 P-----HMFSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHD-LSVVEHIADEV 225 (327)
T ss_pred C-----ccCCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCC-HHHHHHhCCEE
Confidence 4 45999999999999999999999999999999999999999999999987668888887765 45777899999
Q ss_pred EEecCCeEEEecChhHHH
Q 045902 417 ILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~~ 434 (1472)
++|++|++++.|+.+++.
T Consensus 226 ~vm~~G~ive~g~~~~~~ 243 (327)
T PRK11308 226 MVMYLGRCVEKGTKEQIF 243 (327)
T ss_pred EEEECCEEEEECCHHHHh
Confidence 999999999999998875
No 269
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=6.9e-34 Score=321.70 Aligned_cols=202 Identities=23% Similarity=0.324 Sum_probs=167.4
Q ss_pred ccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEc-CCCCCCC
Q 045902 184 RKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYIS-QHDLHHG 260 (1472)
Q Consensus 184 ~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~-Q~d~~~~ 260 (1472)
..+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|++..... .++.++|++ |++.+++
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~ 108 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQPT---SGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWW 108 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEccccchhhcccEEEEcCCccccCC
Confidence 4467999999999999999999999999999999999999887 899999998754321 235799997 5567778
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
.+||+|++.+.....+... .+ . ....+.+++.+||++..|+.+++
T Consensus 109 ~~tv~e~l~~~~~~~~~~~----------~~----------~--------------~~~~~~~l~~~gl~~~~~~~~~~- 153 (236)
T cd03267 109 DLPVIDSFYLLAAIYDLPP----------AR----------F--------------KKRLDELSELLDLEELLDTPVRQ- 153 (236)
T ss_pred CCcHHHHHHHHHHHcCCCH----------HH----------H--------------HHHHHHHHHHcCChhHhcCChhh-
Confidence 9999999987543221100 00 0 00134578889999888887765
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++.+++|++++|+
T Consensus 154 ----LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~ 228 (236)
T cd03267 154 ----LSLGQRMRAEIAAALLHEPEILFLDEPTIGLDVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVID 228 (236)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEe
Confidence 99999999999999999999999999999999999999999999998766789888887764 7778999999999
Q ss_pred CCeEEEec
Q 045902 421 EGEIVYQG 428 (1472)
Q Consensus 421 ~G~iv~~G 428 (1472)
+|++++.|
T Consensus 229 ~G~i~~~g 236 (236)
T cd03267 229 KGRLLYDG 236 (236)
T ss_pred CCEEEecC
Confidence 99998765
No 270
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=6.3e-34 Score=321.37 Aligned_cols=197 Identities=27% Similarity=0.401 Sum_probs=168.1
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
+.+|+|+|++++|||+++|+||||||||||+++|+|..++ ..|+|.++|.+... ...++.++|++|++..++.+|+.
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~--~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETP--TSGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTVF 90 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CceEEEECCEEcCcCChhhcceEEEecccccCCCCcHH
Confidence 4699999999999999999999999999999999998773 58999999987643 12346789999999998899999
Q ss_pred HHHHHHHHcCCCc----hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHH
Q 045902 982 ESLLYSAWLRLPK----DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1057 (1472)
Q Consensus 982 e~l~~~~~l~~~~----~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~ 1057 (1472)
||+.+....+... ...++++++.+++.+..++.. ..||+|||||++||++|+.+|++++|||||+|||+.+
T Consensus 91 ~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~ 165 (232)
T cd03300 91 ENIAFGLRLKKLPKAEIKERVAEALDLVQLEGYANRKP-----SQLSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKL 165 (232)
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHH
Confidence 9998765433211 234667888888877666543 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1058 AAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1058 ~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+..+.+.|++++++ |+|||+++|++. ++.+.+|++++|++ |++++.|+.
T Consensus 166 ~~~l~~~l~~~~~~~~~tiii~sh~~~-~~~~~~d~i~~l~~-G~~~~~~~~ 215 (232)
T cd03300 166 RKDMQLELKRLQKELGITFVFVTHDQE-EALTMSDRIAVMNK-GKIQQIGTP 215 (232)
T ss_pred HHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEecCCH
Confidence 99999999999865 899999999975 46788999999985 788888764
No 271
>PRK09493 glnQ glutamine ABC transporter ATP-binding protein; Reviewed
Probab=100.00 E-value=8.8e-34 Score=322.04 Aligned_cols=205 Identities=22% Similarity=0.363 Sum_probs=170.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-----CCceEEEEcCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-----PQRTCAYISQHDLHHG 260 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~~~ 260 (1472)
+.+|+|+|++++|||+++|+||||||||||+++|+|.++++ +|+|.++|.++.... .++.++|++|++..++
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 90 (240)
T PRK09493 14 TQVLHNIDLNIDQGEVVVIIGPSGSGKSTLLRCINKLEEIT---SGDLIVDGLKVNDPKVDERLIRQEAGMVFQQFYLFP 90 (240)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECCcCChhHHHHhhceEEEecccccCC
Confidence 46999999999999999999999999999999999999887 899999999876421 1357999999999999
Q ss_pred CCCHHHHHHHhhhc-cCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 261 EMTVRETLDFSGRC-LGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
.+||+||+.+.... .+. ...+ . ...++.+++.+||++..|..+.
T Consensus 91 ~~tv~~~l~~~~~~~~~~----------~~~~----------~--------------~~~~~~~l~~~gl~~~~~~~~~- 135 (240)
T PRK09493 91 HLTALENVMFGPLRVRGA----------SKEE----------A--------------EKQARELLAKVGLAERAHHYPS- 135 (240)
T ss_pred CCcHHHHHHhHHHHhcCC----------CHHH----------H--------------HHHHHHHHHHcCChHHHhcChh-
Confidence 99999999875321 110 0000 0 0013557888999877776654
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++++ .++|+|++.|++. ++.+++|++++|
T Consensus 136 ----~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l 209 (240)
T PRK09493 136 ----ELSGGQQQRVAIARALAVKPKLMLFDEPTSALDPELRHEVLKVMQDLAE-EGMTMVIVTHEIG-FAEKVASRLIFI 209 (240)
T ss_pred ----hcCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCHH-HHHHhCCEEEEE
Confidence 4999999999999999999999999999999999999999999999875 4788888887654 677899999999
Q ss_pred cCCeEEEecChhHHH
Q 045902 420 SEGEIVYQGPREYVL 434 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~ 434 (1472)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (240)
T PRK09493 210 DKGRIAEDGDPQVLI 224 (240)
T ss_pred ECCEEEeeCCHHHHh
Confidence 999999999987764
No 272
>COG4988 CydD ABC-type transport system involved in cytochrome bd biosynthesis, ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.5e-34 Score=342.69 Aligned_cols=214 Identities=26% Similarity=0.430 Sum_probs=180.3
Q ss_pred cceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcC
Q 045902 874 QPLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISG 953 (1472)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G 953 (1472)
.++.+..+|+++.++ +++++++|+|++++||+.+||+|+||||||||+++|+|..++ .+|+|.+||
T Consensus 317 ~~~ei~~~~l~~~y~------------~g~~~l~~l~~t~~~g~~talvG~SGaGKSTLl~lL~G~~~~--~~G~I~vng 382 (559)
T COG4988 317 PPIEISLENLSFRYP------------DGKPALSDLNLTIKAGQLTALVGASGAGKSTLLNLLLGFLAP--TQGEIRVNG 382 (559)
T ss_pred CCceeeecceEEecC------------CCCcccCCceeEecCCcEEEEECCCCCCHHHHHHHHhCcCCC--CCceEEECC
Confidence 456667778887753 234899999999999999999999999999999999999874 589999999
Q ss_pred ccC---ChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccccc------ccCCCCCCCCC
Q 045902 954 YPK---KQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNS------LVGLPGVDGLS 1024 (1472)
Q Consensus 954 ~~~---~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~------~~~~~~~~~LS 1024 (1472)
.+. +...+++.++||+|++.+++. |++||+.+... ...++.+.++++..++.++.+. .+|. +.++||
T Consensus 383 ~~l~~l~~~~~~k~i~~v~Q~p~lf~g-TireNi~l~~~--~~s~e~i~~al~~a~l~~~v~~p~GLdt~ige-~G~~LS 458 (559)
T COG4988 383 IDLRDLSPEAWRKQISWVSQNPYLFAG-TIRENILLARP--DASDEEIIAALDQAGLLEFVPKPDGLDTVIGE-GGAGLS 458 (559)
T ss_pred ccccccCHHHHHhHeeeeCCCCccccc-cHHHHhhccCC--cCCHHHHHHHHHHhcHHHhhcCCCcccchhcc-CCCCCC
Confidence 875 456788999999999998865 99999987532 1234667788888888776554 3333 346899
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1025 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1025 gGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
|||+|||++||||+++++++++||||++||.++++.|++.|.++++ ++|||++||++. ....+|+|++|++ |+++.
T Consensus 459 gGQ~QRlaLARAll~~~~l~llDEpTA~LD~etE~~i~~~l~~l~~-~ktvl~itHrl~--~~~~~D~I~vld~-G~l~~ 534 (559)
T COG4988 459 GGQAQRLALARALLSPASLLLLDEPTAHLDAETEQIILQALQELAK-QKTVLVITHRLE--DAADADRIVVLDN-GRLVE 534 (559)
T ss_pred HHHHHHHHHHHHhcCCCCEEEecCCccCCCHhHHHHHHHHHHHHHh-CCeEEEEEcChH--HHhcCCEEEEecC-Cceec
Confidence 9999999999999999999999999999999999999999999986 599999999964 5678899999985 78999
Q ss_pred EcCCC
Q 045902 1105 AGPLG 1109 (1472)
Q Consensus 1105 ~g~~~ 1109 (1472)
.|...
T Consensus 535 ~g~~~ 539 (559)
T COG4988 535 QGTHE 539 (559)
T ss_pred cCCHH
Confidence 88753
No 273
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=8.7e-34 Score=319.57 Aligned_cols=209 Identities=24% Similarity=0.350 Sum_probs=168.2
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+... .....+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~~~---------~~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~ 74 (228)
T PRK10584 6 IVEVHHLKKSVGQG---------EHELSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDD--GSSGEVSLVGQPL 74 (228)
T ss_pred eEEEeeeEEEccCC---------CcceEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCC--CCCeeEEECCEEc
Confidence 46778877654210 001359999999999999999999999999999999999876 4589999999875
Q ss_pred Chh---c---c-cceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 957 KQE---T---F-ARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 957 ~~~---~---~-~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
... . . ++.++|++|++.+++.+|+.||+.+....+. +. ...++++++.+++.+..+..+ ..|||
T Consensus 75 ~~~~~~~~~~~~~~~i~~~~q~~~l~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~ 149 (228)
T PRK10584 75 HQMDEEARAKLRAKHVGFVFQSFMLIPTLNALENVELPALLRGESSRQSRNGAKALLEQLGLGKRLDHLP-----AQLSG 149 (228)
T ss_pred ccCCHHHHHHHHhheEEEEEcccccCCCcCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCH
Confidence 321 1 1 2468999999988899999999987654321 11 134567788888776555543 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
|||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |.|||+++|+++ .+ +.+|++++|++ |+++.
T Consensus 150 Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~l~~-g~i~~ 226 (228)
T PRK10584 150 GEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLRLVN-GQLQE 226 (228)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC-CEEEe
Confidence 9999999999999999999999999999999999999999999764 899999999976 34 66999999985 67653
No 274
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=3.9e-34 Score=327.93 Aligned_cols=199 Identities=27% Similarity=0.394 Sum_probs=167.1
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~l 978 (1472)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+
T Consensus 13 ~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 13 GRLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALR--PDAGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCCCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 3569999999999999999999999999999999999876 358999999987532 23345689999998778889
Q ss_pred CHHHHHHHHHH-c----CCCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 045902 979 TIYESLLYSAW-L----RLPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1050 (1472)
Q Consensus 979 Tv~e~l~~~~~-l----~~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPT 1050 (1472)
||.||+.+... . ..+. ...++++++.+++.+..++.+ ..||||||||++||++|+.+|++++|||||
T Consensus 91 tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt 165 (256)
T TIGR03873 91 TVRDVVALGRIPHRSLWAGDSPHDAAVVDRALARTELSHLADRDM-----STLSGGERQRVHVARALAQEPKLLLLDEPT 165 (256)
T ss_pred CHHHHHHhcchhhhhhccCCCHHHHHHHHHHHHHcCcHhhhcCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCcc
Confidence 99999987421 1 1111 134567788888876655543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1051 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1051 sgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+|||+.++..+.+.|+++.++|.|||+++|+++ ++.+.+|++++|++ |+++..|+.+
T Consensus 166 ~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 222 (256)
T TIGR03873 166 NHLDVRAQLETLALVRELAATGVTVVAALHDLN-LAASYCDHVVVLDG-GRVVAAGPPR 222 (256)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEeC-CCEEEecCHH
Confidence 999999999999999999877899999999986 47788999999985 7888888754
No 275
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.1e-34 Score=327.68 Aligned_cols=215 Identities=23% Similarity=0.298 Sum_probs=171.2
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---CeeEEEEEEc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GYIEGSISIS 952 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 952 (1472)
..+.++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++
T Consensus 12 ~~l~i~nl~~~~~-------------~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~ 78 (269)
T PRK14259 12 IIISLQNVTISYG-------------TFEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFD 78 (269)
T ss_pred ceEEEEeEEEEEC-------------CEEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEEC
Confidence 4577888876652 24699999999999999999999999999999999998642 1358999999
Q ss_pred CccCC-----hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cc--hHHHHHHHHHccccc-ccccccCCCCCCCC
Q 045902 953 GYPKK-----QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PK--DMFVEEVMELVEMKA-LRNSLVGLPGVDGL 1023 (1472)
Q Consensus 953 G~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~--~~~~~~v~~~l~l~~-~~~~~~~~~~~~~L 1023 (1472)
|.++. ....++.++|++|++.+++ .||+||+.+.+..+. .. ++.++++++.+++.. +.+.. . ..+..|
T Consensus 79 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~-~~~~~L 155 (269)
T PRK14259 79 GTDLYDPRVDPVEVRRRIGMVFQQPNPFP-KSIYENIAFGARINGYTGDMDELVERSLRKAAVWDECKDKL-N-ESGYSL 155 (269)
T ss_pred CEEcccccCCHHHHhhceEEEccCCccch-hhHHHHHhhhhhhcCCcHHHHHHHHHHHHHhCCcchhhhhh-C-CCcccC
Confidence 98753 1234567899999998887 499999988654332 11 234456677776632 11111 1 123579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEec-----
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR----- 1098 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~----- 1098 (1472)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.||++++|++
T Consensus 156 S~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~~~~~~ 233 (269)
T PRK14259 156 SGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK-NFTIVIVTHNMQ-QAVRVSDMTAFFNAEEVEG 233 (269)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCEEEEEecccccc
Confidence 99999999999999999999999999999999999999999999964 799999999986 57789999999985
Q ss_pred -----CcEEEEEcCC
Q 045902 1099 -----GGHVIYAGPL 1108 (1472)
Q Consensus 1099 -----gg~v~~~g~~ 1108 (1472)
.|++++.|+.
T Consensus 234 ~~~g~~g~~~~~~~~ 248 (269)
T PRK14259 234 GSGGKVGYLVEFNET 248 (269)
T ss_pred ccccccceEEEeCCH
Confidence 2678888875
No 276
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.2e-34 Score=330.52 Aligned_cols=196 Identities=24% Similarity=0.368 Sum_probs=162.2
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeEEeccCC--C
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-------ETFARISGYCEQND--I 973 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-------~~~~~~~gyv~Q~~--~ 973 (1472)
+++|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++ .
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHV--PTQGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPESQ 97 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccCHHHHHhheEEEeeChhhh
Confidence 359999999999999999999999999999999999876 358999999987532 23456789999996 3
Q ss_pred CCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 045902 974 HSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE 1048 (1472)
Q Consensus 974 ~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDE 1048 (1472)
++ ..|++||+.+..... ...+ ..++++++.+++. ...+.. +..||||||||++||+||+.+|++|+|||
T Consensus 98 ~~-~~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~la~al~~~p~lllLDE 171 (280)
T PRK13649 98 LF-EETVLKDVAFGPQNFGVSQEEAEALAREKLALVGISESLFEKN-----PFELSGGQMRRVAIAGILAMEPKILVLDE 171 (280)
T ss_pred hc-cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhhhhCC-----cccCCHHHHHHHHHHHHHHcCCCEEEEeC
Confidence 44 469999998764332 1221 2356677788775 333433 34799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1049 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1049 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 172 Pt~~LD~~~~~~l~~~l~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 229 (280)
T PRK13649 172 PTAGLDPKGRKELMTLFKKLHQSGMTIVLVTHLMD-DVANYADFVYVLEK-GKLVLSGKP 229 (280)
T ss_pred CcccCCHHHHHHHHHHHHHHHHCCCEEEEEeccHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 99999999999999999999877899999999976 46678999999985 788888875
No 277
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1e-33 Score=323.76 Aligned_cols=213 Identities=22% Similarity=0.330 Sum_probs=170.9
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--CC-eeEEEEEEcCc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--GG-YIEGSISISGY 954 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~~-~~~G~i~i~G~ 954 (1472)
+.++|+++.+. ++.+|+|+|++|++||++||+||||||||||+++|+|..+ +. +.+|+|.++|.
T Consensus 5 l~~~nl~~~~~-------------~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 71 (252)
T PRK14256 5 VKLEQLNVHFG-------------KNHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDT 71 (252)
T ss_pred EEEEEEEEEeC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCE
Confidence 56777766542 3469999999999999999999999999999999999864 21 24899999998
Q ss_pred cCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cch---HHHHHHHHHccccc-ccccccCCCCCCCC
Q 045902 955 PKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMKA-LRNSLVGLPGVDGL 1023 (1472)
Q Consensus 955 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~~-~~~~~~~~~~~~~L 1023 (1472)
++.. ..+++.++|++|+..+++.+|+.||+.+...... ... ..++++++.+++.. +.+.... .+..|
T Consensus 72 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~--~~~~L 149 (252)
T PRK14256 72 DIYDRGVDPVSIRRRVGMVFQKPNPFPAMSIYDNVIAGYKLNGRVNRSEADEIVESSLKRVALWDEVKDRLKS--NAMEL 149 (252)
T ss_pred EcccccCChHHhhccEEEEecCCCCCCcCcHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhHHhhC--CcCcC
Confidence 7532 2346679999999999999999999987543321 111 34566777777643 1121111 24579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.||++++|.+ |+++
T Consensus 150 S~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~ 226 (252)
T PRK14256 150 SGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE-KYTIIIVTHNMQ-QAARVSDYTAFFYM-GDLV 226 (252)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-CCcEEEEECCHH-HHHhhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999975 689999999976 46788999999975 7899
Q ss_pred EEcCC
Q 045902 1104 YAGPL 1108 (1472)
Q Consensus 1104 ~~g~~ 1108 (1472)
..|+.
T Consensus 227 ~~~~~ 231 (252)
T PRK14256 227 ECGET 231 (252)
T ss_pred EeCCH
Confidence 88875
No 278
>TIGR03415 ABC_choXWV_ATP choline ABC transporter, ATP-binding protein. Members of this protein family are the ATP-binding subunit of a three-protein transporter. This family belongs, more broadly, to the family of proline and glycine-betaine transporters, but members have been identified by direct characterization and by bioinformatic means as choline transporters. Many species have several closely-related members of this family, probably with variable abilities to act additionally on related quaternary amines.
Probab=100.00 E-value=3.9e-34 Score=340.29 Aligned_cols=201 Identities=20% Similarity=0.297 Sum_probs=170.2
Q ss_pred cccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc----CC---hhc---c-cceeEEe
Q 045902 900 ENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP----KK---QET---F-ARISGYC 968 (1472)
Q Consensus 900 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~----~~---~~~---~-~~~~gyv 968 (1472)
++...+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+ +. ... . ++.++|+
T Consensus 34 ~g~~~~l~~vsf~i~~Gei~~I~G~nGsGKSTLlr~L~Gl~~--p~~G~I~idG~~~~~~i~~~~~~~l~~~r~~~i~~v 111 (382)
T TIGR03415 34 TGLVVGVANASLDIEEGEICVLMGLSGSGKSSLLRAVNGLNP--VSRGSVLVKDGDGSIDVANCDAATLRRLRTHRVSMV 111 (382)
T ss_pred hCCEEEEEeeEEEEcCCCEEEEECCCCCcHHHHHHHHhCCCC--CCCcEEEECCEecccccccCCHHHHHHHhcCCEEEE
Confidence 345679999999999999999999999999999999999877 458999999962 21 111 1 2579999
Q ss_pred ccCCCCCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCc
Q 045902 969 EQNDIHSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSII 1044 (1472)
Q Consensus 969 ~Q~~~~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il 1044 (1472)
+|+..+++.+||+||+.|....+. +.. ..++++++.++|.+..+... ..||||||||++|||||+.+|+||
T Consensus 112 fQ~~~l~p~~Tv~eNi~~~~~~~g~~~~~~~~~a~e~le~vgL~~~~~~~~-----~~LSgGq~QRV~LARALa~~P~IL 186 (382)
T TIGR03415 112 FQKFALMPWLTVEENVAFGLEMQGMPEAERRKRVDEQLELVGLAQWADKKP-----GELSGGMQQRVGLARAFAMDADIL 186 (382)
T ss_pred ECCCcCCCCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEE
Confidence 999999999999999998765432 222 34567888888877666553 479999999999999999999999
Q ss_pred cccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1045 FMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1045 ~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 187 LlDEPts~LD~~~r~~l~~~L~~l~~~~~~TII~iTHdl~-e~~~l~DrI~vl~~-G~iv~~g~~~ 250 (382)
T TIGR03415 187 LMDEPFSALDPLIRTQLQDELLELQAKLNKTIIFVSHDLD-EALKIGNRIAIMEG-GRIIQHGTPE 250 (382)
T ss_pred EEECCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecCHH
Confidence 999999999999999999999999765 899999999976 57789999999985 7899999864
No 279
>PRK11264 putative amino-acid ABC transporter ATP-binding protein YecC; Provisional
Probab=100.00 E-value=9.8e-34 Score=323.71 Aligned_cols=204 Identities=25% Similarity=0.337 Sum_probs=169.4
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-----------CCceEEEEcCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-----------PQRTCAYISQH 255 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----------~~~~~~yv~Q~ 255 (1472)
.+|+|+|+.+++|++++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|+
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~i~~v~q~ 93 (250)
T PRK11264 17 TVLHGIDLEVKPGEVVAIIGPSGSGKTTLLRCINLLEQPE---AGTIRVGDITIDTARSLSQQKGLIRQLRQHVGFVFQN 93 (250)
T ss_pred eeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEccccccccchhhHHHHhhhhEEEEecC
Confidence 5899999999999999999999999999999999999887 899999999875321 13579999999
Q ss_pred CCCCCCCCHHHHHHHhhhc-cCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccc
Q 045902 256 DLHHGEMTVRETLDFSGRC-LGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICAD 334 (1472)
Q Consensus 256 d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 334 (1472)
+.+++.+||+||+.++... .+.. .. +. ...++.+++.+||++..|
T Consensus 94 ~~~~~~~tv~e~l~~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~gl~~~~~ 139 (250)
T PRK11264 94 FNLFPHRTVLENIIEGPVIVKGEP----------KE----------EA--------------TARARELLAKVGLAGKET 139 (250)
T ss_pred cccCCCCCHHHHHHHHHHHhcCCC----------HH----------HH--------------HHHHHHHHHHcCCcchhh
Confidence 9999999999999875321 1100 00 00 001345788899987777
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccC
Q 045902 335 IMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFD 414 (1472)
Q Consensus 335 t~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD 414 (1472)
+.++ .|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|
T Consensus 140 ~~~~-----~LS~Gq~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~tH~~-~~~~~~~d 212 (250)
T PRK11264 140 SYPR-----RLSGGQQQRVAIARALAMRPEVILFDEPTSALDPELVGEVLNTIRQLAQ-EKRTMVIVTHEM-SFARDVAD 212 (250)
T ss_pred CChh-----hCChHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCH-HHHHHhcC
Confidence 6554 4999999999999999999999999999999999999999999999875 478888877665 46778999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 045902 415 DIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 415 ~iilL~~G~iv~~G~~~~~~ 434 (1472)
++++|++|++++.|+.+++.
T Consensus 213 ~i~~l~~G~i~~~~~~~~~~ 232 (250)
T PRK11264 213 RAIFMDQGRIVEQGPAKALF 232 (250)
T ss_pred EEEEEECCEEEEeCCHHHHh
Confidence 99999999999999987763
No 280
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.5e-34 Score=329.07 Aligned_cols=197 Identities=29% Similarity=0.385 Sum_probs=165.3
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeEEeccCCC-CCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-----ETFARISGYCEQNDI-HSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-----~~~~~~~gyv~Q~~~-~~~ 976 (1472)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++. .+.
T Consensus 15 ~~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 15 TEALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILK--PTSGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 469999999999999999999999999999999999876 358999999987631 124567999999963 334
Q ss_pred CCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 977 NVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
..||.|++.+..... .... ..+.++++.+++.++.++.. ..||||||||++||++|+.+|++|+|||||+|
T Consensus 93 ~~tv~e~i~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~Gq~qrv~laral~~~p~llllDEPt~g 167 (275)
T PRK13639 93 APTVEEDVAFGPLNLGLSKEEVEKRVKEALKAVGMEGFENKPP-----HHLSGGQKKRVAIAGILAMKPEIIVLDEPTSG 167 (275)
T ss_pred cccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCCCchhhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCcC
Confidence 579999998754321 1111 34667888888877766653 47999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+.++..+++.|++++++|.|||+++|+++ ++.+.||++++|++ |+++..|+.
T Consensus 168 LD~~~~~~l~~~l~~l~~~~~til~vtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 221 (275)
T PRK13639 168 LDPMGASQIMKLLYDLNKEGITIIISTHDVD-LVPVYADKVYVMSD-GKIIKEGTP 221 (275)
T ss_pred CCHHHHHHHHHHHHHHHHCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999877999999999976 46678999999986 788888875
No 281
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=3.6e-34 Score=322.77 Aligned_cols=192 Identities=24% Similarity=0.342 Sum_probs=161.2
Q ss_pred eccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHHHHH
Q 045902 906 LQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYESLL 985 (1472)
Q Consensus 906 L~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~ 985 (1472)
|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+..... ...+|++|++.+++.+||.||+.
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~--~~~~~v~q~~~l~~~~tv~e~l~ 76 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQ--PTSGGVILEGKQITEPG--PDRMVVFQNYSLLPWLTVRENIA 76 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCCCC--hhheEEecCcccCCCCCHHHHHH
Confidence 579999999999999999999999999999999876 45899999998764321 12489999999999999999998
Q ss_pred HHHH--cC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 045902 986 YSAW--LR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1059 (1472)
Q Consensus 986 ~~~~--l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~ 1059 (1472)
+... .. .... ..++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~ 151 (230)
T TIGR01184 77 LAVDRVLPDLSKSERRAIVEEHIALVGLTEAADKRP-----GQLSGGMKQRVAIARALSIRPKVLLLDEPFGALDALTRG 151 (230)
T ss_pred HHHHhcccCCCHHHHHHHHHHHHHHcCCHHHHcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHH
Confidence 7532 11 1111 23567788888876655543 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1060 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1060 ~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
.+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 152 ~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~-G~i~~~~~~ 199 (230)
T TIGR01184 152 NLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTN-GPAANIGQI 199 (230)
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeC-CcEecccCc
Confidence 999999999765 899999999976 47788999999985 788877754
No 282
>cd03267 ABC_NatA_like Similar in sequence to NatA, this is the ATPase component of a bacterial ABC-type Na+ transport system called NatAB, which catalyzes ATP-dependent electrogenic Na+ extrusion without mechanically coupled to proton or K+ uptake. NatB possess six putative membrane spanning regions at its C-terminus. In B. subtilis, NatAB is inducible by agents such as ethanol and protonophores, which lower the protonmotive force across the membrane. The closest sequence similarity to NatA is exhibited by DrrA of the two-component daunomycin- and doxorubicin-efflux system. Hence, the functional NatAB is presumably assembled with two copies of the single ATP-binding protein and the single intergral membrane protein.
Probab=100.00 E-value=5.5e-34 Score=322.49 Aligned_cols=197 Identities=28% Similarity=0.427 Sum_probs=164.2
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEec-cCCCCCCC
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCE-QNDIHSPN 977 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~-Q~~~~~~~ 977 (1472)
+.+++|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++ |++.+++.
T Consensus 32 ~~~~il~~vs~~i~~Ge~~~i~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~i~~~~~~~~~~~~~ 109 (236)
T cd03267 32 REVEALKGISFTIEKGEIVGFIGPNGAGKTTTLKILSGLLQ--PTSGEVRVAGLVPWKRRKKFLRRIGVVFGQKTQLWWD 109 (236)
T ss_pred CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEccccchhhcccEEEEcCCccccCCC
Confidence 34679999999999999999999999999999999999876 458999999986432 23456789997 55677788
Q ss_pred CCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 978 VTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 978 lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
+|++|++.+....+. ... ..++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+||
T Consensus 110 ~tv~e~l~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~L 184 (236)
T cd03267 110 LPVIDSFYLLAAIYDLPPARFKKRLDELSELLDLEELLDTPV-----RQLSLGQRMRAEIAAALLHEPEILFLDEPTIGL 184 (236)
T ss_pred CcHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCCCCC
Confidence 999999987654432 221 24567788888877666553 479999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1054 DARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
|+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |++++.|
T Consensus 185 D~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g 236 (236)
T cd03267 185 DVVAQENIRNFLKEYNRERGTTVLLTSHYMK-DIEALARRVLVIDK-GRLLYDG 236 (236)
T ss_pred CHHHHHHHHHHHHHHHhcCCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEecC
Confidence 999999999999999764 899999999976 46788999999985 6777654
No 283
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.4e-34 Score=326.84 Aligned_cols=216 Identities=22% Similarity=0.322 Sum_probs=171.9
Q ss_pred cceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-CeeEEEEE
Q 045902 874 QPLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GYIEGSIS 950 (1472)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~ 950 (1472)
....+.++|+++.+. +..+|+|+|++|++||+++|+||||||||||+++|+|..+ + .+.+|+|.
T Consensus 10 ~~~~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~ 76 (260)
T PRK10744 10 APSKIQVRNLNFYYG-------------KFHALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEIL 76 (260)
T ss_pred CCceEEEEEEEEEeC-------------CeEEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEE
Confidence 344677888877652 2469999999999999999999999999999999999864 1 13589999
Q ss_pred EcCccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC--CCch---HHHHHHHHHccccc-ccccccCCCC
Q 045902 951 ISGYPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR--LPKD---MFVEEVMELVEMKA-LRNSLVGLPG 1019 (1472)
Q Consensus 951 i~G~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~--~~~~---~~~~~v~~~l~l~~-~~~~~~~~~~ 1019 (1472)
++|.++.. ..+++.++|++|+..+++ .|++||+.+..... .+.. ..++++++.+++.. +.+. ... .
T Consensus 77 ~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-~~~-~ 153 (260)
T PRK10744 77 LDGENILTPKQDIALLRAKVGMVFQKPTPFP-MSIYDNIAFGVRLFEKLSRAEMDERVEWALTKAALWNEVKDK-LHQ-S 153 (260)
T ss_pred ECCEEccccccchHHHhcceEEEecCCccCc-CcHHHHHhhhHhhcCCCCHHHHHHHHHHHHHHcCCChhhHHH-Hhc-C
Confidence 99987631 234567999999988777 89999998765422 1221 34567777777632 1111 111 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1020 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1020 ~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
...||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.+|++++|++
T Consensus 154 ~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~~- 230 (260)
T PRK10744 154 GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELK-QDYTVVIVTHNMQ-QAARCSDYTAFMYL- 230 (260)
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEEC-
Confidence 35799999999999999999999999999999999999999999999996 4789999999976 46678999999985
Q ss_pred cEEEEEcCC
Q 045902 1100 GHVIYAGPL 1108 (1472)
Q Consensus 1100 g~v~~~g~~ 1108 (1472)
|+++..|+.
T Consensus 231 G~i~~~g~~ 239 (260)
T PRK10744 231 GELIEFGNT 239 (260)
T ss_pred CEEEEeCCH
Confidence 789888874
No 284
>TIGR03608 L_ocin_972_ABC putative bacteriocin export ABC transporter, lactococcin 972 group. A gene pair with a fairly wide distribution consists of a polypeptide related to the lactococcin 972 (see TIGR01653) and multiple-membrane-spanning putative immunity protein (see TIGR01654). This model represents a small clade within the ABC transporters that regularly are found adjacent to these bacteriocin system gene pairs and are likely serve as export proteins.
Probab=100.00 E-value=3.9e-34 Score=317.35 Aligned_cols=186 Identities=24% Similarity=0.357 Sum_probs=157.7
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC---h----hcccceeEEeccCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK---Q----ETFARISGYCEQNDIH 974 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~---~----~~~~~~~gyv~Q~~~~ 974 (1472)
++.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.. . ...++.++|++|++.+
T Consensus 10 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~ 87 (206)
T TIGR03608 10 DKIILDDLNLTIEKGKMYAIIGESGSGKSTLLNIIGLLEK--FDSGQVYLNGKETPPLNSKKASKFRREKLGYLFQNFAL 87 (206)
T ss_pred CEEEEeceEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCC--CCCeEEEECCEEccccchhhHHHHHHhCeeEEecchhh
Confidence 3569999999999999999999999999999999999876 45899999998742 1 1245679999999999
Q ss_pred CCCCCHHHHHHHHHHcCC-Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 045902 975 SPNVTIYESLLYSAWLRL-PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1050 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l~~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPT 1050 (1472)
++.+|++||+.+...... .. ...++++++.+++.+..++.. ..||||||||++||++|+.+|++|+|||||
T Consensus 88 ~~~~t~~e~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qr~~laral~~~p~llllDEPt 162 (206)
T TIGR03608 88 IENETVEENLDLGLKYKKLSKKEKREKKKEALEKVGLNLKLKQKI-----YELSGGEQQRVALARAILKDPPLILADEPT 162 (206)
T ss_pred ccCCcHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCchhhhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCc
Confidence 999999999988654322 11 234667888888876666543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEE
Q 045902 1051 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1096 (1472)
Q Consensus 1051 sgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l 1096 (1472)
+|||+.++..+.+.|+++.++|.|||+++|++. ..+.+|++++|
T Consensus 163 ~~LD~~~~~~l~~~l~~~~~~~~tii~~sh~~~--~~~~~d~i~~l 206 (206)
T TIGR03608 163 GSLDPKNRDEVLDLLLELNDEGKTIIIVTHDPE--VAKQADRVIEL 206 (206)
T ss_pred CCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHhhcCEEEeC
Confidence 999999999999999999877999999999975 45689998875
No 285
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=326.15 Aligned_cols=205 Identities=25% Similarity=0.304 Sum_probs=170.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC---CCceEEEEcCCCC-CCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV---PQRTCAYISQHDL-HHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 261 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|+++.... .++.++|++|++. .++.
T Consensus 22 ~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~I~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 98 (271)
T PRK13632 22 NNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLKPQ---SGEIKIDGITISKENLKEIRKKIGIIFQNPDNQFIG 98 (271)
T ss_pred ccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEecCcCCHHHHhcceEEEEeCHHHhcCc
Confidence 35899999999999999999999999999999999999887 899999999886532 2457999999974 6778
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.+.....+.. .. +. ...++.+++.+||++..|+.++
T Consensus 99 ~tv~enl~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~--- 141 (271)
T PRK13632 99 ATVEDDIAFGLENKKVP----------PK----------KM--------------KDIIDDLAKKVGMEDYLDKEPQ--- 141 (271)
T ss_pred ccHHHHHHhHHHHcCCC----------HH----------HH--------------HHHHHHHHHHcCCHHHhhCCcc---
Confidence 99999998754321100 00 00 0023557888999887777665
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ ..+|++++|++
T Consensus 142 --~LS~G~~qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~-~~~d~v~~l~~ 217 (271)
T PRK13632 142 --NLSGGQKQRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMD-EA-ILADKVIVFSE 217 (271)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechh-HH-hhCCEEEEEEC
Confidence 499999999999999999999999999999999999999999999987654689999888875 34 47999999999
Q ss_pred CeEEEecChhHHH
Q 045902 422 GEIVYQGPREYVL 434 (1472)
Q Consensus 422 G~iv~~G~~~~~~ 434 (1472)
|++++.|+.+++.
T Consensus 218 G~i~~~g~~~~~~ 230 (271)
T PRK13632 218 GKLIAQGKPKEIL 230 (271)
T ss_pred CEEEEecCHHHHh
Confidence 9999999987763
No 286
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.5e-34 Score=321.98 Aligned_cols=192 Identities=23% Similarity=0.301 Sum_probs=162.8
Q ss_pred cceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh-cccceeEEeccCCCCCCCCCHHHHHHH
Q 045902 908 DVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE-TFARISGYCEQNDIHSPNVTIYESLLY 986 (1472)
Q Consensus 908 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~e~l~~ 986 (1472)
|||+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.... ..++.++|++|++.+++.+|+.||+.+
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~~ 94 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLT--PASGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIGL 94 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHhc
Confidence 8999999999999999999999999999999876 4589999999875431 224568999999999999999999986
Q ss_pred HHHcC--CC--chHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHH
Q 045902 987 SAWLR--LP--KDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1062 (1472)
Q Consensus 987 ~~~l~--~~--~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~ 1062 (1472)
..... .. .+..++++++.+++.+..++.. ..||||||||++||++|+.+|++|+|||||+|||+.++..+.
T Consensus 95 ~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~ 169 (232)
T PRK10771 95 GLNPGLKLNAAQREKLHAIARQMGIEDLLARLP-----GQLSGGQRQRVALARCLVREQPILLLDEPFSALDPALRQEML 169 (232)
T ss_pred ccccccCCCHHHHHHHHHHHHHcCcHHHHhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHH
Confidence 53211 11 1234677888888877666654 479999999999999999999999999999999999999999
Q ss_pred HHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1063 RTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1063 ~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+.|++++++ |+|||+++|++. ++.+.+|++++|.+ |++++.|+.
T Consensus 170 ~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 214 (232)
T PRK10771 170 TLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVAD-GRIAWDGPT 214 (232)
T ss_pred HHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 999999764 899999999976 46778999999985 789998875
No 287
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-34 Score=327.57 Aligned_cols=201 Identities=27% Similarity=0.399 Sum_probs=165.7
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC------eeEEEEEEcCccCCh---hcccceeEEeccCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG------YIEGSISISGYPKKQ---ETFARISGYCEQND 972 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~------~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~ 972 (1472)
++.+|+|+|++|++||++||+||||||||||+++|+|..++. ..+|+|.++|.+... ..+++.++|++|++
T Consensus 13 ~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~ 92 (272)
T PRK13547 13 HRAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAA 92 (272)
T ss_pred CEeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccC
Confidence 356999999999999999999999999999999999987632 127999999987532 33456689999998
Q ss_pred CCCCCCCHHHHHHHHHHcCC------C--chHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHh------
Q 045902 973 IHSPNVTIYESLLYSAWLRL------P--KDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELV------ 1038 (1472)
Q Consensus 973 ~~~~~lTv~e~l~~~~~l~~------~--~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~------ 1038 (1472)
..++.+|++||+.+...... . ....++++++.+++.+..++. +..|||||||||+||++|+
T Consensus 93 ~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG~~qrv~laral~~~~~~~ 167 (272)
T PRK13547 93 QPAFAFSAREIVLLGRYPHARRAGALTHRDGEIAWQALALAGATALVGRD-----VTTLSGGELARVQFARVLAQLWPPH 167 (272)
T ss_pred CCCCCCcHHHHHhhcccccccccccCCHHHHHHHHHHHHHcCcHhhhcCC-----cccCCHHHHHHHHHHHHHhcccccc
Confidence 76667999999987532110 0 113456778888887665543 3479999999999999999
Q ss_pred ---hCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1039 ---ANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1039 ---~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|+++ ++.+.+|++++|.+ |+++..|+..
T Consensus 168 ~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 240 (272)
T PRK13547 168 DAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-LAARHADRIAMLAD-GAIVAHGAPA 240 (272)
T ss_pred ccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEEC-CeEEEecCHH
Confidence 599999999999999999999999999999876 899999999976 46678999999985 7899888764
No 288
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=325.73 Aligned_cols=214 Identities=25% Similarity=0.321 Sum_probs=171.0
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---CeeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GYIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~G 953 (1472)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 19 ~l~~~nl~~~~~-------------~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g 85 (267)
T PRK14235 19 KMRARDVSVFYG-------------EKQALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDG 85 (267)
T ss_pred eEEEEeEEEEEC-------------CEEEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECC
Confidence 577888876642 24699999999999999999999999999999999998653 13589999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC---Cc---hHHHHHHHHHcccccccccccCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL---PK---DMFVEEVMELVEMKALRNSLVGLPGVDG 1022 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~---~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~ 1022 (1472)
.++.. ..+++.++|++|++.+++. |+.||+.+....+. +. ...++++++.+++.+....... ..+..
T Consensus 86 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~ 163 (267)
T PRK14235 86 EDIYDPRLDVVELRARVGMVFQKPNPFPK-SIYENVAYGPRIHGLARSKAELDEIVETSLRKAGLWEEVKDRLH-EPGTG 163 (267)
T ss_pred EECcccccchHHHhhceEEEecCCCCCCC-cHHHHHHHHHHhcccccchHHHHHHHHHHHHHcCCchhhhHHhh-CCccc
Confidence 87632 2345678999999888875 99999988654321 11 1335667777777432111111 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ .+.+.+|++++|++ |++
T Consensus 164 LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~-~~tiiivtH~~~-~~~~~~d~v~~l~~-G~i 240 (267)
T PRK14235 164 LSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ-NYTIVIVTHSMQ-QAARVSQRTAFFHL-GNL 240 (267)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc-CCeEEEEEcCHH-HHHhhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999965 789999999976 46678999999985 789
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
+..|+.
T Consensus 241 ~~~g~~ 246 (267)
T PRK14235 241 VEVGDT 246 (267)
T ss_pred EEeCCH
Confidence 888874
No 289
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=5.1e-34 Score=340.60 Aligned_cols=192 Identities=27% Similarity=0.402 Sum_probs=165.6
Q ss_pred cceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeEEeccCCCCCCCCCH
Q 045902 908 DVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-------ETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 908 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+||
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 92 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTR--PDEGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLSV 92 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCcH
Confidence 8999999999999999999999999999999876 358999999987532 1245679999999999999999
Q ss_pred HHHHHHHHHcCCCc--hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHH
Q 045902 981 YESLLYSAWLRLPK--DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1058 (1472)
Q Consensus 981 ~e~l~~~~~l~~~~--~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~ 1058 (1472)
+||+.|........ ...++++++.+++.+..++.. ..|||||||||+|||||+.+|++|+|||||+|||+.++
T Consensus 93 ~enl~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~ 167 (354)
T TIGR02142 93 RGNLRYGMKRARPSERRISFERVIELLGIGHLLGRLP-----GRLSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRK 167 (354)
T ss_pred HHHHHHHhhccChhHHHHHHHHHHHHcCChhHhcCCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHH
Confidence 99998865432211 234678888888887766653 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1059 AIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1059 ~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
..+++.|++++++ |+|||++||+++ ++...+|++++|++ |+++..|+.
T Consensus 168 ~~l~~~L~~l~~~~g~tiiivtH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 216 (354)
T TIGR02142 168 YEILPYLERLHAEFGIPILYVSHSLQ-EVLRLADRVVVLED-GRVAAAGPI 216 (354)
T ss_pred HHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEeC-CEEEEECCH
Confidence 9999999999865 899999999986 57788999999985 789888875
No 290
>PRK10895 lipopolysaccharide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=321.20 Aligned_cols=206 Identities=21% Similarity=0.328 Sum_probs=171.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|.++....+ ++.++|++|++.+++.
T Consensus 16 ~~~l~~~sl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 92 (241)
T PRK10895 16 RRVVEDVSLTVNSGEIVGLLGPNGAGKTTTFYMVVGIVPRD---AGNIIIDDEDISLLPLHARARRGIGYLPQEASIFRR 92 (241)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCCCHHHHHHhCeEEeccCCccccc
Confidence 46999999999999999999999999999999999999887 8999999998765432 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.+..+..... ...+ . ....+.+++.+||++..++.++
T Consensus 93 ~tv~enl~~~~~~~~~~---------~~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~--- 136 (241)
T PRK10895 93 LSVYDNLMAVLQIRDDL---------SAEQ----------R--------------EDRANELMEEFHIEHLRDSMGQ--- 136 (241)
T ss_pred CcHHHHHhhhhhccccc---------CHHH----------H--------------HHHHHHHHHHcCCHHHhhcchh---
Confidence 99999998753321100 0000 0 0123457888899876665554
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.++++++ .+.|+|++.|++ .++.+++|++++|++
T Consensus 137 --~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~g~tiii~sH~~-~~~~~~~d~v~~l~~ 212 (241)
T PRK10895 137 --SLSGGERRRVEIARALAANPKFILLDEPFAGVDPISVIDIKRIIEHLRD-SGLGVLITDHNV-RETLAVCERAYIVSQ 212 (241)
T ss_pred --hCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEEcCH-HHHHHhcCEEEEEeC
Confidence 5999999999999999999999999999999999999999999999875 578888888765 478889999999999
Q ss_pred CeEEEecChhHHH
Q 045902 422 GEIVYQGPREYVL 434 (1472)
Q Consensus 422 G~iv~~G~~~~~~ 434 (1472)
|++++.|+++++.
T Consensus 213 G~i~~~~~~~~~~ 225 (241)
T PRK10895 213 GHLIAHGTPTEIL 225 (241)
T ss_pred CeEEeeCCHHHHh
Confidence 9999999987763
No 291
>PRK11022 dppD dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.2e-33 Score=333.26 Aligned_cols=219 Identities=18% Similarity=0.240 Sum_probs=171.9
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC-C-eeEEEEEEcCcc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-G-YIEGSISISGYP 955 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-~-~~~G~i~i~G~~ 955 (1472)
+.++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++ + +.+|+|.++|.+
T Consensus 4 L~v~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~lvG~sGsGKSTL~~~l~Gll~~~~~~~~G~i~~~G~~ 74 (326)
T PRK11022 4 LNVDKLSVHFGDE---------SAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQD 74 (326)
T ss_pred EEEeCeEEEECCC---------CccEEEEeeeEEEECCCCEEEEECCCCChHHHHHHHHHcCCCCCCCCcceEEEECCEE
Confidence 5677776655311 1124699999999999999999999999999999999998652 2 358999999988
Q ss_pred CCh---hcc----cceeEEeccCC--CCCCCCCHHHHHHHHHHcC--CCch---HHHHHHHHHcccccccccccCCCCCC
Q 045902 956 KKQ---ETF----ARISGYCEQND--IHSPNVTIYESLLYSAWLR--LPKD---MFVEEVMELVEMKALRNSLVGLPGVD 1021 (1472)
Q Consensus 956 ~~~---~~~----~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~--~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~ 1021 (1472)
+.. ..+ ++.++|++|++ .+.|.+|+.+++....... .... +.+.++++.+++.+..+..... +.
T Consensus 75 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~l~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~l~~~--p~ 152 (326)
T PRK11022 75 LQRISEKERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKKTRRQRAIDLLNQVGIPDPASRLDVY--PH 152 (326)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCchhhcCCcCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHCCCCChHHHHhCC--ch
Confidence 632 111 23689999998 4788999998876544322 2222 3456777777775432222222 35
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecCc
Q 045902 1022 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1100 (1472)
Q Consensus 1022 ~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg 1100 (1472)
.|||||||||+||+||+.+|++|++||||+|||+.++..+++.|+++.+ .|.|||++|||++ .+.+.+|++++|.+ |
T Consensus 153 ~LSgGq~QRv~iArAL~~~P~llilDEPts~LD~~~~~~il~lL~~l~~~~g~til~iTHdl~-~~~~~adri~vm~~-G 230 (326)
T PRK11022 153 QLSGGMSQRVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLA-LVAEAAHKIIVMYA-G 230 (326)
T ss_pred hCCHHHHHHHHHHHHHHhCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-C
Confidence 7999999999999999999999999999999999999999999999976 4899999999976 36678999999985 7
Q ss_pred EEEEEcCCC
Q 045902 1101 HVIYAGPLG 1109 (1472)
Q Consensus 1101 ~v~~~g~~~ 1109 (1472)
+++..|+..
T Consensus 231 ~ive~g~~~ 239 (326)
T PRK11022 231 QVVETGKAH 239 (326)
T ss_pred EEEEECCHH
Confidence 999999853
No 292
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=7.8e-34 Score=326.93 Aligned_cols=197 Identities=24% Similarity=0.357 Sum_probs=164.5
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh------cccceeEEeccCC--CC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE------TFARISGYCEQND--IH 974 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~------~~~~~~gyv~Q~~--~~ 974 (1472)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++ .+
T Consensus 24 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~~ 101 (265)
T TIGR02769 24 APVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEK--PAQGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPSAV 101 (265)
T ss_pred eEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEccccCHHHHHHHhhceEEEecChhhhc
Confidence 579999999999999999999999999999999999876 4589999999875421 1356799999996 46
Q ss_pred CCCCCHHHHHHHHHH-cC-CCc---hHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 045902 975 SPNVTIYESLLYSAW-LR-LPK---DMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE 1048 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~-l~-~~~---~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDE 1048 (1472)
.+.+||.|++.+... .. ... ...++++++.+++. .+.+.. +..||||||||++|||||+.+|++|+|||
T Consensus 102 ~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LSgGe~qrv~laral~~~p~illLDE 176 (265)
T TIGR02769 102 NPRMTVRQIIGEPLRHLTSLDESEQKARIAELLDMVGLRSEDADKL-----PRQLSGGQLQRINIARALAVKPKLIVLDE 176 (265)
T ss_pred CCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCChhhhhCC-----hhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 678999999976532 11 121 23456778888874 444543 34799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1049 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1049 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+|||+.++..+.+.|+++.++ |+|||+++|+++ .+.+.+|++++|++ |++++.|+.
T Consensus 177 Pt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 235 (265)
T TIGR02769 177 AVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDLR-LVQSFCQRVAVMDK-GQIVEECDV 235 (265)
T ss_pred CcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHHhcEEEEEeC-CEEEEECCH
Confidence 99999999999999999999865 899999999976 46678999999985 789998885
No 293
>PRK10584 putative ABC transporter ATP-binding protein YbbA; Provisional
Probab=100.00 E-value=1.9e-33 Score=316.81 Aligned_cols=198 Identities=26% Similarity=0.365 Sum_probs=164.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 258 (1472)
..+|+|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|+++....+ ++.++|++|++.+
T Consensus 23 ~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~l 99 (228)
T PRK10584 23 LSILTGVELVVKRGETIALIGESGSGKSTLLAILAGLDDGS---SGEVSLVGQPLHQMDEEARAKLRAKHVGFVFQSFML 99 (228)
T ss_pred eEEEeccEEEEcCCCEEEEECCCCCCHHHHHHHHHcCCCCC---CeeEEECCEEcccCCHHHHHHHHhheEEEEEccccc
Confidence 35899999999999999999999999999999999999887 8999999998865432 2469999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
++.+||.||+.+.....+.. . ++. ...++.+++.+||.+..++.+.
T Consensus 100 ~~~~tv~~~l~~~~~~~~~~----------~----------~~~--------------~~~~~~~l~~~~l~~~~~~~~~ 145 (228)
T PRK10584 100 IPTLNALENVELPALLRGES----------S----------RQS--------------RNGAKALLEQLGLGKRLDHLPA 145 (228)
T ss_pred CCCcCHHHHHHHHHHhcCCC----------H----------HHH--------------HHHHHHHHHHcCCHhHhhCChh
Confidence 99999999998754321100 0 000 0013557888999877776665
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++ +.+|++++
T Consensus 146 -----~LS~Ge~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~-~~~d~i~~ 218 (228)
T PRK10584 146 -----QLSGGEQQRVALARAFNGRPDVLFADEPTGNLDRQTGDKIADLLFSLNREHGTTLILVTHDLQ-LA-ARCDRRLR 218 (228)
T ss_pred -----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEE
Confidence 499999999999999999999999999999999999999999999997655789999888765 44 56999999
Q ss_pred ecCCeEEEe
Q 045902 419 LSEGEIVYQ 427 (1472)
Q Consensus 419 L~~G~iv~~ 427 (1472)
|++|++++.
T Consensus 219 l~~g~i~~~ 227 (228)
T PRK10584 219 LVNGQLQEE 227 (228)
T ss_pred EECCEEEec
Confidence 999999753
No 294
>TIGR03410 urea_trans_UrtE urea ABC transporter, ATP-binding protein UrtE. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=9e-34 Score=319.89 Aligned_cols=202 Identities=27% Similarity=0.345 Sum_probs=167.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 13 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 89 (230)
T TIGR03410 13 SHILRGVSLEVPKGEVTCVLGRNGVGKTTLLKTLMGLLPVK---SGSIRLDGEDITKLPPHERARAGIAYVPQGREIFPR 89 (230)
T ss_pred eEEecceeeEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCCHHHHHHhCeEEeccCCcccCC
Confidence 36999999999999999999999999999999999999987 8999999998765432 3469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhC-CcccccccccCc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILG-LDICADIMVGNE 340 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lg-L~~~~dt~vg~~ 340 (1472)
+||+||+.++....+.. ..+ ..+.+++.++ +++..|+.++
T Consensus 90 ~tv~~~l~~~~~~~~~~----------~~~---------------------------~~~~~l~~~~~l~~~~~~~~~-- 130 (230)
T TIGR03410 90 LTVEENLLTGLAALPRR----------SRK---------------------------IPDEIYELFPVLKEMLGRRGG-- 130 (230)
T ss_pred CcHHHHHHHHHHhcCcc----------hHH---------------------------HHHHHHHHHHhHHHHhhCChh--
Confidence 99999998764321100 000 0133455554 4544555554
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
.||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++++..+.|+|++.|++ .++.+++|++++|+
T Consensus 131 ---~LS~G~~qrv~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~v~~l~ 206 (230)
T TIGR03410 131 ---DLSGGQQQQLAIARALVTRPKLLLLDEPTEGIQPSIIKDIGRVIRRLRAEGGMAILLVEQYL-DFARELADRYYVME 206 (230)
T ss_pred ---hCCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHHcCCcEEEEEeCCH-HHHHHhCCEEEEEE
Confidence 59999999999999999999999999999999999999999999998765578988888775 47778999999999
Q ss_pred CCeEEEecChhHH
Q 045902 421 EGEIVYQGPREYV 433 (1472)
Q Consensus 421 ~G~iv~~G~~~~~ 433 (1472)
+|++++.|+.+++
T Consensus 207 ~g~i~~~~~~~~~ 219 (230)
T TIGR03410 207 RGRVVASGAGDEL 219 (230)
T ss_pred CCEEEEECCHHHc
Confidence 9999999998775
No 295
>PRK00635 excinuclease ABC subunit A; Provisional
Probab=100.00 E-value=2.5e-32 Score=365.41 Aligned_cols=128 Identities=21% Similarity=0.309 Sum_probs=101.3
Q ss_pred CCCCCCHHHHHHHHHHcC----CCch---HHHHHHHHHcccccc-cccccCCCCCCCCCHHHHHHHHHHHHHh---hCCC
Q 045902 974 HSPNVTIYESLLYSAWLR----LPKD---MFVEEVMELVEMKAL-RNSLVGLPGVDGLSTEQRKRLTIAVELV---ANPS 1042 (1472)
Q Consensus 974 ~~~~lTv~e~l~~~~~l~----~~~~---~~~~~v~~~l~l~~~-~~~~~~~~~~~~LSgGqrqRl~iA~aL~---~~p~ 1042 (1472)
.+...||.|+|.+...-. .+.. ..+ ++++.+++.++ .+.. ...||||||||+.||++|+ .+|+
T Consensus 759 ~~~~~tI~evL~mtv~ea~~~f~~~~~i~~~l-~~L~~vGL~~l~l~q~-----~~tLSGGE~QRV~LAraL~~~~~~P~ 832 (1809)
T PRK00635 759 RYKGKNIADILEMTAYEAEKFFLDEPSIHEKI-HALCSLGLDYLPLGRP-----LSSLSGGEIQRLKLAYELLAPSKKPT 832 (1809)
T ss_pred ccCCCCHHHHHHcCHHHHHHcccChHHHHHHH-HHHHHcCCcchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCC
Confidence 456789999998764311 1111 223 35666677654 3443 3479999999999999998 5999
Q ss_pred CccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEe-----cCcEEEEEcCCC
Q 045902 1043 IIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGHVIYAGPLG 1109 (1472)
Q Consensus 1043 il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~-----~gg~v~~~g~~~ 1109 (1472)
+++|||||+|||+.+...+++.|++++++|.|||+++|+++ ..+.+|++++|. .+|+++..|+..
T Consensus 833 LLILDEPTsGLD~~~~~~Ll~lL~~L~~~G~TVIiIsHdl~--~i~~aDrVi~L~p~gg~~~G~iv~~Gtpe 902 (1809)
T PRK00635 833 LYVLDEPTTGLHTHDIKALIYVLQSLTHQGHTVVIIEHNMH--VVKVADYVLELGPEGGNLGGYLLASCSPE 902 (1809)
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHHHhcCCEEEEEeCCHH--HHHhCCEEEEEccCCCCCCCEEEEeCCHH
Confidence 99999999999999999999999999888999999999976 348999999995 368999999864
No 296
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=6.2e-34 Score=364.11 Aligned_cols=209 Identities=21% Similarity=0.345 Sum_probs=171.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 356 ~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 431 (582)
T PRK11176 356 VPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDID---EGEILLDGHDLRDYTLASLRNQVALVSQNVHLFN-D 431 (582)
T ss_pred CccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCCC---CceEEECCEEhhhcCHHHHHhhceEEccCceeec-c
Confidence 46999999999999999999999999999999999999998 8999999999987654 467999999998886 6
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++|||.++..-. ..++++.+..+.+.+ +..++ .|++..||.+|+ .+
T Consensus 432 Ti~~Ni~~~~~~~---------------------~~~~~i~~al~~~~l---------~~~i~--~lp~Gldt~ig~-~g 478 (582)
T PRK11176 432 TIANNIAYARTEQ---------------------YSREQIEEAARMAYA---------MDFIN--KMDNGLDTVIGE-NG 478 (582)
T ss_pred hHHHHHhcCCCCC---------------------CCHHHHHHHHHHhCc---------HHHHH--hcccccCceeCC-CC
Confidence 9999998752100 011122222222111 12222 256678999985 56
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
..||||||||++|||||+++|++++||||||+||+.++..+.+.|+++. .++|+|++.|++ +..+.||+|++|++|
T Consensus 479 ~~LSGGqrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~--~~~tvI~VtHr~--~~~~~~D~Ii~l~~g 554 (582)
T PRK11176 479 VLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ--KNRTSLVIAHRL--STIEKADEILVVEDG 554 (582)
T ss_pred CcCCHHHHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--HHHHhCCEEEEEECC
Confidence 7899999999999999999999999999999999999999999999874 368988888876 567889999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
+++++|+++++.+
T Consensus 555 ~i~e~g~~~~l~~ 567 (582)
T PRK11176 555 EIVERGTHAELLA 567 (582)
T ss_pred EEEEeCCHHHHHh
Confidence 9999999998864
No 297
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=1e-33 Score=320.66 Aligned_cols=197 Identities=28% Similarity=0.430 Sum_probs=167.5
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh-cccceeEEeccCCCCCCCCCHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE-TFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~-~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
+.+|+|+|+++.+||+++|+||||||||||+++|+|..+ +.+|+|.++|.++... ..++.++|++|++.+++.+|+.
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~ 90 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQ--PDSGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTVR 90 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEcCcCChhhcCEEEEecChhhccCCcHH
Confidence 469999999999999999999999999999999999876 3589999999876432 2346789999999999999999
Q ss_pred HHHHHHHHcCCCc----hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHH
Q 045902 982 ESLLYSAWLRLPK----DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1057 (1472)
Q Consensus 982 e~l~~~~~l~~~~----~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~ 1057 (1472)
||+.+....+... .+.++++++.+++.+..++.. ..||+||+||++||++|+.+|++++|||||+|||+.+
T Consensus 91 enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~ 165 (237)
T TIGR00968 91 DNIAFGLEIRKHPKAKIKARVEELLELVQLEGLGDRYP-----NQLSGGQRQRVALARALAVEPQVLLLDEPFGALDAKV 165 (237)
T ss_pred HHHHhHHHhcCCCHHHHHHHHHHHHHHcCCHhHhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHH
Confidence 9998765433211 134567778887766656543 4799999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1058 AAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1058 ~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+..+.+.|++++++ |+|||++||+++ ++.+.+|++++|.+ |++++.|+.
T Consensus 166 ~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~-g~i~~~~~~ 215 (237)
T TIGR00968 166 RKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSN-GKIEQIGSP 215 (237)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEecCH
Confidence 99999999998775 899999999976 46788999999985 788888875
No 298
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.9e-34 Score=340.21 Aligned_cols=191 Identities=23% Similarity=0.360 Sum_probs=166.2
Q ss_pred cceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeEEeccCCCCCCCCCH
Q 045902 908 DVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-------ETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 908 ~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-------~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.+... ...++.+||++|+..+++.+||
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~--p~~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~tv 93 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTR--PQKGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYKV 93 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCcH
Confidence 8999999999999999999999999999999876 358999999987532 2245679999999999999999
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHH
Q 045902 981 YESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1060 (1472)
Q Consensus 981 ~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~ 1060 (1472)
+||+.|... ......++++++.+++.++.++.. ..|||||||||+|||||+.+|++|+|||||+|||+.++..
T Consensus 94 ~enl~~~~~--~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~ 166 (352)
T PRK11144 94 RGNLRYGMA--KSMVAQFDKIVALLGIEPLLDRYP-----GSLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRE 166 (352)
T ss_pred HHHHHhhhh--hhhHHHHHHHHHHcCCchhhhCCc-----ccCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHH
Confidence 999988643 122356788899999887766653 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1061 VMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1061 i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 167 l~~~L~~l~~~~g~tii~vTHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 214 (352)
T PRK11144 167 LLPYLERLAREINIPILYVSHSLD-EILRLADRVVVLEQ-GKVKAFGPLE 214 (352)
T ss_pred HHHHHHHHHHhcCCeEEEEecCHH-HHHHhCCEEEEEeC-CEEEEecCHH
Confidence 99999999765 899999999986 57788999999985 7899888753
No 299
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.2e-33 Score=323.90 Aligned_cols=215 Identities=22% Similarity=0.311 Sum_probs=173.9
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCC-CCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDL-HHGEM 262 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 262 (1472)
.+|+|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|+++..... ++.++|++|++. +++..
T Consensus 23 ~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 99 (269)
T PRK13648 23 FTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEKVK---SGEIFYNNQAITDDNFEKLRKHIGIVFQNPDNQFVGS 99 (269)
T ss_pred cceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheeEEEeChHHhcccc
Confidence 5899999999999999999999999999999999999887 8999999998765322 357999999974 67788
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|+++|+.|.....+.. .. +. ...++.+++.+||.+..|+.++
T Consensus 100 ~v~~~~~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~---- 141 (269)
T PRK13648 100 IVKYDVAFGLENHAVP----------YD----------EM--------------HRRVSEALKQVDMLERADYEPN---- 141 (269)
T ss_pred cHHHHHHhhHHhcCCC----------HH----------HH--------------HHHHHHHHHHcCCchhhhCCcc----
Confidence 9999998864321110 00 00 0013457888999877776654
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
.||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++.. +|+|++|++|
T Consensus 142 -~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~-~~~~-~d~i~~l~~G 218 (269)
T PRK13648 142 -ALSGGQKQRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLS-EAME-ADHVIVMNKG 218 (269)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCch-HHhc-CCEEEEEECC
Confidence 599999999999999999999999999999999999999999999987655789999888865 4554 9999999999
Q ss_pred eEEEecChhHHHH---HHHhcCCCCC
Q 045902 423 EIVYQGPREYVLD---FFESVGFRCP 445 (1472)
Q Consensus 423 ~iv~~G~~~~~~~---~F~~~G~~cp 445 (1472)
++++.|+.+++.+ .+...|+++|
T Consensus 219 ~i~~~g~~~~~~~~~~~~~~~~~~~~ 244 (269)
T PRK13648 219 TVYKEGTPTEIFDHAEELTRIGLDLP 244 (269)
T ss_pred EEEEecCHHHHhcCHHHHHhcCCCCC
Confidence 9999999887632 3333444444
No 300
>KOG0057 consensus Mitochondrial Fe/S cluster exporter, ABC superfamily [Intracellular trafficking, secretion, and vesicular transport]
Probab=100.00 E-value=2.3e-34 Score=336.73 Aligned_cols=207 Identities=28% Similarity=0.436 Sum_probs=171.6
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
-++.|+|+.+++. +++++|+|+||+|++||.+||+|+|||||||++|+|.+... .+|+|.|||++
T Consensus 350 ~~I~F~dV~f~y~------------~k~~iL~gvsf~I~kGekVaIvG~nGsGKSTilr~LlrF~d---~sG~I~IdG~d 414 (591)
T KOG0057|consen 350 GSIEFDDVHFSYG------------PKRKVLKGVSFTIPKGEKVAIVGSNGSGKSTILRLLLRFFD---YSGSILIDGQD 414 (591)
T ss_pred CcEEEEeeEEEeC------------CCCceecceeEEecCCCEEEEECCCCCCHHHHHHHHHHHhc---cCCcEEECCee
Confidence 4589999988763 34569999999999999999999999999999999999775 48999999998
Q ss_pred CCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccc----------cCCCCCCC
Q 045902 956 KKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSL----------VGLPGVDG 1022 (1472)
Q Consensus 956 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~----------~~~~~~~~ 1022 (1472)
+++ +..|+.+||||||..++. -||.+|+.|+. .+..-|++.+.++..++.|.. +|..| ..
T Consensus 415 ik~~~~~SlR~~Ig~VPQd~~LFn-dTIl~NI~YGn-----~sas~eeV~e~~k~a~~hd~i~~l~~GY~T~VGerG-~~ 487 (591)
T KOG0057|consen 415 IKEVSLESLRQSIGVVPQDSVLFN-DTILYNIKYGN-----PSASDEEVVEACKRAGLHDVISRLPDGYQTLVGERG-LM 487 (591)
T ss_pred HhhhChHHhhhheeEeCCcccccc-hhHHHHhhcCC-----CCcCHHHHHHHHHHcCcHHHHHhccccchhhHhhcc-cc
Confidence 643 567889999999988875 59999999863 222234444444444444433 44433 35
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
|||||||||+||||++.+|+|+++|||||.||..+.+.+++.+++. ..|+|+|++.|+. ++...||+|++|++ |++
T Consensus 488 LSGGekQrvslaRa~lKda~Il~~DEaTS~LD~~TE~~i~~~i~~~-~~~rTvI~IvH~l--~ll~~~DkI~~l~n-G~v 563 (591)
T KOG0057|consen 488 LSGGEKQRVSLARAFLKDAPILLLDEATSALDSETEREILDMIMDV-MSGRTVIMIVHRL--DLLKDFDKIIVLDN-GTV 563 (591)
T ss_pred cccchHHHHHHHHHHhcCCCeEEecCcccccchhhHHHHHHHHHHh-cCCCeEEEEEecc--hhHhcCCEEEEEEC-Cee
Confidence 9999999999999999999999999999999999999999999994 4589999999985 57899999999986 688
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
...|+.
T Consensus 564 ~e~gth 569 (591)
T KOG0057|consen 564 KEYGTH 569 (591)
T ss_pred EEeccH
Confidence 888875
No 301
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.7e-33 Score=324.80 Aligned_cols=205 Identities=25% Similarity=0.311 Sum_probs=170.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC----CCceEEEEcCCCC-CCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV----PQRTCAYISQHDL-HHG 260 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----~~~~~~yv~Q~d~-~~~ 260 (1472)
+.+|+|+|++|++||+++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 23 ~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~i~g~~i~~~~~~~~~~~~i~~v~q~~~~~~~ 99 (280)
T PRK13633 23 KLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLIPS---EGKVYVDGLDTSDEENLWDIRNKAGMVFQNPDNQIV 99 (280)
T ss_pred cceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEeccccccHHHHhhheEEEecChhhhhc
Confidence 46999999999999999999999999999999999999987 899999999886432 2467999999974 233
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
..||.|++.|.....+.. .. +.+ ..++.+++.+||+...++.+++
T Consensus 100 ~~~v~~~l~~~~~~~~~~----------~~----------~~~--------------~~~~~~l~~~gL~~~~~~~~~~- 144 (280)
T PRK13633 100 ATIVEEDVAFGPENLGIP----------PE----------EIR--------------ERVDESLKKVGMYEYRRHAPHL- 144 (280)
T ss_pred cccHHHHHHhhHhhcCCC----------HH----------HHH--------------HHHHHHHHHCCCHhHhhCCccc-
Confidence 569999998864322110 00 000 1245678899998888877754
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++. .+|++++|+
T Consensus 145 ----LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~-~~~-~~d~v~~l~ 218 (280)
T PRK13633 145 ----LSGGQKQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYME-EAV-EADRIIVMD 218 (280)
T ss_pred ----CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChH-HHh-cCCEEEEEE
Confidence 99999999999999999999999999999999999999999999997656889999988776 444 499999999
Q ss_pred CCeEEEecChhHHH
Q 045902 421 EGEIVYQGPREYVL 434 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~ 434 (1472)
+|+++++|+.+++.
T Consensus 219 ~G~i~~~g~~~~~~ 232 (280)
T PRK13633 219 SGKVVMEGTPKEIF 232 (280)
T ss_pred CCEEEEecCHHHHh
Confidence 99999999998874
No 302
>PRK13632 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.9e-34 Score=326.99 Aligned_cols=211 Identities=23% Similarity=0.337 Sum_probs=173.7
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+. .+++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~~~nl~~~~~-----------~~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i 73 (271)
T PRK13632 7 MIKVENVSFSYP-----------NSENNALKNVSFEINEGEYVAILGHNGSGKSTISKILTGLLK--PQSGEIKIDGITI 73 (271)
T ss_pred EEEEEeEEEEcC-----------CCCccceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEec
Confidence 467888876542 013469999999999999999999999999999999999876 3589999999886
Q ss_pred Ch---hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHH
Q 045902 957 KQ---ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQR 1028 (1472)
Q Consensus 957 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqr 1028 (1472)
.. ..+++.++|++|++. .++.+|++||+.+..... ...+ ..++++++.+++.+..++.. ..||||||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~ 148 (271)
T PRK13632 74 SKENLKEIRKKIGIIFQNPDNQFIGATVEDDIAFGLENKKVPPKKMKDIIDDLAKKVGMEDYLDKEP-----QNLSGGQK 148 (271)
T ss_pred CcCCHHHHhcceEEEEeCHHHhcCcccHHHHHHhHHHHcCCCHHHHHHHHHHHHHHcCCHHHhhCCc-----ccCCHHHH
Confidence 42 234667999999974 567789999998764332 2222 24567888888877666553 47999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcC
Q 045902 1029 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGP 1107 (1472)
Q Consensus 1029 qRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~ 1107 (1472)
||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ ++|||+++|+++. + ..+|++++|.+ |+++..|+
T Consensus 149 qrl~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~~g~ 225 (271)
T PRK13632 149 QRVAIASVLALNPEIIIFDESTSMLDPKGKREIKKIMVDLRKTRKKTLISITHDMDE-A-ILADKVIVFSE-GKLIAQGK 225 (271)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEEechhH-H-hhCCEEEEEEC-CEEEEecC
Confidence 9999999999999999999999999999999999999999766 5999999999863 4 57999999985 78888887
Q ss_pred C
Q 045902 1108 L 1108 (1472)
Q Consensus 1108 ~ 1108 (1472)
.
T Consensus 226 ~ 226 (271)
T PRK13632 226 P 226 (271)
T ss_pred H
Confidence 5
No 303
>PRK09473 oppD oligopeptide transporter ATP-binding component; Provisional
Probab=100.00 E-value=1.3e-33 Score=332.92 Aligned_cols=220 Identities=21% Similarity=0.300 Sum_probs=173.6
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC-eeEEEEEEcCcc
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-YIEGSISISGYP 955 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~~~G~i~i~G~~ 955 (1472)
.+.++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++. ..+|+|.++|.+
T Consensus 12 ~L~i~~l~~~~~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTL~~~l~Gl~~p~~~~sG~I~~~G~~ 82 (330)
T PRK09473 12 LLDVKDLRVTFSTP---------DGDVTAVNDLNFSLRAGETLGIVGESGSGKSQTAFALMGLLAANGRIGGSATFNGRE 82 (330)
T ss_pred eEEEeCeEEEEecC---------CCCEEEEeeeEEEEcCCCEEEEECCCCchHHHHHHHHHcCCCCCCCCCeEEEECCEE
Confidence 46778877655321 12356999999999999999999999999999999999987642 238999999988
Q ss_pred CCh---hc---cc-ceeEEeccCC--CCCCCCCHHHHHHHHHHcC--CCch---HHHHHHHHHcccccccccccCCCCCC
Q 045902 956 KKQ---ET---FA-RISGYCEQND--IHSPNVTIYESLLYSAWLR--LPKD---MFVEEVMELVEMKALRNSLVGLPGVD 1021 (1472)
Q Consensus 956 ~~~---~~---~~-~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~--~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~ 1021 (1472)
+.. .. ++ +.++|++|++ .+.|.+|+.+++.+..... .... ..+.++++.+++.+..+.... .+.
T Consensus 83 i~~~~~~~~~~~r~~~i~~v~Q~~~~~l~p~~~v~~~i~~~~~~~~~~~~~~~~~~~~~~L~~vgL~~~~~~~~~--~p~ 160 (330)
T PRK09473 83 ILNLPEKELNKLRAEQISMIFQDPMTSLNPYMRVGEQLMEVLMLHKGMSKAEAFEESVRMLDAVKMPEARKRMKM--YPH 160 (330)
T ss_pred CCcCCHHHHHHHhcCCEEEEEcCchhhcCCCCCHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCCChHHHhcC--Ccc
Confidence 632 22 22 4799999998 6789999999987654332 1222 344566676666543222222 245
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCc
Q 045902 1022 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1100 (1472)
Q Consensus 1022 ~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg 1100 (1472)
.||||||||++||+||+.+|++|++||||+|||+.++..++++|+++.++ |.|||++|||++ .+.+.+|++++|.+ |
T Consensus 161 ~LSgG~~QRv~IArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~~Dri~vm~~-G 238 (330)
T PRK09473 161 EFSGGMRQRVMIAMALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLG-VVAGICDKVLVMYA-G 238 (330)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEECCHH-HHHHhCCEEEEEEC-C
Confidence 89999999999999999999999999999999999999999999999765 899999999976 46678999999985 7
Q ss_pred EEEEEcCCC
Q 045902 1101 HVIYAGPLG 1109 (1472)
Q Consensus 1101 ~v~~~g~~~ 1109 (1472)
+++..|+..
T Consensus 239 ~ive~g~~~ 247 (330)
T PRK09473 239 RTMEYGNAR 247 (330)
T ss_pred EEEEECCHH
Confidence 999999853
No 304
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.6e-33 Score=324.54 Aligned_cols=217 Identities=22% Similarity=0.283 Sum_probs=173.4
Q ss_pred cceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---CeeEEEEE
Q 045902 874 QPLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GYIEGSIS 950 (1472)
Q Consensus 874 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~ 950 (1472)
....+.++|+++.++ .+.+|+|||+++++||++||+|||||||||||++|+|..++ .+.+|+|.
T Consensus 17 ~~~~l~~~nl~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~ 83 (267)
T PRK14237 17 EEIALSTKDLHVYYG-------------KKEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQIL 83 (267)
T ss_pred CCeEEEEeeEEEEEC-------------CeeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEE
Confidence 344678888877652 35699999999999999999999999999999999998653 14689999
Q ss_pred EcCccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC-C-Cc---hHHHHHHHHHcccccccccccCCCCC
Q 045902 951 ISGYPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR-L-PK---DMFVEEVMELVEMKALRNSLVGLPGV 1020 (1472)
Q Consensus 951 i~G~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-~-~~---~~~~~~v~~~l~l~~~~~~~~~~~~~ 1020 (1472)
++|.+... ...++.++|++|++.+++ .||+||+.+..... . .. +..++++++.+++.+..+..... .+
T Consensus 84 ~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~~-~~ 161 (267)
T PRK14237 84 YRGIDINRKEINVYEMRKHIGMVFQRPNPFA-KSIYENITFALERAGVKDKKVLDEIVETSLKQAALWDQVKDDLHK-SA 161 (267)
T ss_pred ECCEEcccccCChHHHhcceEEEecCCcccc-ccHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCCchhhhhhcC-Cc
Confidence 99987632 234567899999988877 59999998764322 1 11 13355667777774321122222 24
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCc
Q 045902 1021 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGG 1100 (1472)
Q Consensus 1021 ~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg 1100 (1472)
..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. ++.|||++||+++ ++.+.||++++|++ |
T Consensus 162 ~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~-G 238 (267)
T PRK14237 162 LTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELK-KNYTIIIVTHNMQ-QAARASDYTAFFYL-G 238 (267)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHh-cCCEEEEEecCHH-HHHHhcCEEEEEEC-C
Confidence 5899999999999999999999999999999999999999999999996 4799999999986 57788999999985 7
Q ss_pred EEEEEcCC
Q 045902 1101 HVIYAGPL 1108 (1472)
Q Consensus 1101 ~v~~~g~~ 1108 (1472)
+++..|+.
T Consensus 239 ~i~~~g~~ 246 (267)
T PRK14237 239 DLIEYDKT 246 (267)
T ss_pred EEEEeCCH
Confidence 89998875
No 305
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=2.4e-34 Score=336.47 Aligned_cols=211 Identities=25% Similarity=0.376 Sum_probs=171.0
Q ss_pred cccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCC
Q 045902 183 KRKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHH 259 (1472)
Q Consensus 183 ~~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~ 259 (1472)
.++.++|+|+|+++++||.+||+|++|||||||++.|+|-++++ +|+|+.||.++....+ ++.+++++|...+|
T Consensus 348 ~~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~~~---~G~i~~~g~~~~~l~~~~~~e~i~vl~Qr~hlF 424 (573)
T COG4987 348 GQQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWDPQ---QGSITLNGVEIASLDEQALRETISVLTQRVHLF 424 (573)
T ss_pred CCccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccCCC---CCeeeECCcChhhCChhhHHHHHhhhccchHHH
Confidence 34457999999999999999999999999999999999999998 9999999999988766 35789999976666
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
.-|+|+||..+...- .|+++.+..+...+ +..++ +.++..||.+|
T Consensus 425 -~~Tlr~NL~lA~~~A----------------------sDEel~~aL~qvgL---------~~l~~--~~p~gl~t~lg- 469 (573)
T COG4987 425 -SGTLRDNLRLANPDA----------------------SDEELWAALQQVGL---------EKLLE--SAPDGLNTWLG- 469 (573)
T ss_pred -HHHHHHHHhhcCCCC----------------------CHHHHHHHHHHcCH---------HHHHH--hChhhhhchhc-
Confidence 569999998753210 11222222221111 11111 23345688888
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
+.++.||||||||++|||+|+.++++++|||||.|||+.|+.++++.|.+.+ .++|+++..|+-. -.+.||+|++|
T Consensus 470 e~G~~LSGGE~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~--~~kTll~vTHrL~--~le~~drIivl 545 (573)
T COG4987 470 EGGRRLSGGERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHA--EGKTLLMVTHRLR--GLERMDRIIVL 545 (573)
T ss_pred cCCCcCCchHHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHh--cCCeEEEEecccc--cHhhcCEEEEE
Confidence 6788899999999999999999999999999999999999999999998765 5899999888754 34789999999
Q ss_pred cCCeEEEecChhHHHH
Q 045902 420 SEGEIVYQGPREYVLD 435 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~~ 435 (1472)
++|+++++|.+++++.
T Consensus 546 ~~Gkiie~G~~~~Ll~ 561 (573)
T COG4987 546 DNGKIIEEGTHAELLA 561 (573)
T ss_pred ECCeeeecCCHHhhhc
Confidence 9999999999999864
No 306
>PRK13648 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=326.49 Aligned_cols=212 Identities=26% Similarity=0.324 Sum_probs=173.8
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+.. ..+.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~l~i~~l~~~~~~-----------~~~~~l~~isl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~--~~~G~i~~~g~~~ 73 (269)
T PRK13648 7 IIVFKNVSFQYQS-----------DASFTLKDVSFNIPKGQWTSIVGHNGSGKSTIAKLMIGIEK--VKSGEIFYNNQAI 73 (269)
T ss_pred eEEEEEEEEEcCC-----------CCCcceeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCC--CCceEEEECCEEC
Confidence 4678888765421 11358999999999999999999999999999999999876 4589999999876
Q ss_pred Ch---hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHH
Q 045902 957 KQ---ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQR 1028 (1472)
Q Consensus 957 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqr 1028 (1472)
.. ...++.++|++|++. +++..|+.+++.+...... +.+ ..++++++.+++.+..+.. +..||+|||
T Consensus 74 ~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 148 (269)
T PRK13648 74 TDDNFEKLRKHIGIVFQNPDNQFVGSIVKYDVAFGLENHAVPYDEMHRRVSEALKQVDMLERADYE-----PNALSGGQK 148 (269)
T ss_pred CcCCHHHHHhheeEEEeChHHhcccccHHHHHHhhHHhcCCCHHHHHHHHHHHHHHcCCchhhhCC-----cccCCHHHH
Confidence 32 344567999999974 6778899999987654322 212 3456778888887666654 347999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcC
Q 045902 1029 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGP 1107 (1472)
Q Consensus 1029 qRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~ 1107 (1472)
||++|||||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||+++|+++. +. .+|++++|.+ |++++.|+
T Consensus 149 qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tiiivtH~~~~-~~-~~d~i~~l~~-G~i~~~g~ 225 (269)
T PRK13648 149 QRVAIAGVLALNPSVIILDEATSMLDPDARQNLLDLVRKVKSEHNITIISITHDLSE-AM-EADHVIVMNK-GTVYKEGT 225 (269)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCchH-Hh-cCCEEEEEEC-CEEEEecC
Confidence 9999999999999999999999999999999999999999765 8999999999863 44 4999999985 78998887
Q ss_pred CC
Q 045902 1108 LG 1109 (1472)
Q Consensus 1108 ~~ 1109 (1472)
.+
T Consensus 226 ~~ 227 (269)
T PRK13648 226 PT 227 (269)
T ss_pred HH
Confidence 53
No 307
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=9.5e-34 Score=330.20 Aligned_cols=215 Identities=20% Similarity=0.307 Sum_probs=169.9
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.++.. ......+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~i~nl~~~~~~~--------~~~~~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 75 (289)
T PRK13645 6 DIILDNVSYTYAKK--------TPFEFKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLII--SETGQTIVGDYAI 75 (289)
T ss_pred eEEEEEEEEEeCCC--------CccccceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEEc
Confidence 36778877665210 0001359999999999999999999999999999999999876 3589999999875
Q ss_pred C--------hhcccceeEEeccCCCC-CCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccc-cccccccCCCCCCC
Q 045902 957 K--------QETFARISGYCEQNDIH-SPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMK-ALRNSLVGLPGVDG 1022 (1472)
Q Consensus 957 ~--------~~~~~~~~gyv~Q~~~~-~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~~ 1022 (1472)
. ...+++.++|++|++.. +...|++||+.+..... ...+ ..++++++.+++. ++.++. +..
T Consensus 76 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~ll~~~~L~~~~~~~~-----~~~ 150 (289)
T PRK13645 76 PANLKKIKEVKRLRKEIGLVFQFPEYQLFQETIEKDIAFGPVNLGENKQEAYKKVPELLKLVQLPEDYVKRS-----PFE 150 (289)
T ss_pred cccccccccHHHHhccEEEEEeCcchhhhhhHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCChhHhcCC-----hhh
Confidence 2 12345678999999742 23469999998865422 1221 2355677777773 454443 347
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGH 1101 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~ 1101 (1472)
||||||||++|||||+.+|++|+|||||+|||+.++..+++.|+++.++ |+|||++||+++ ++.+.+|++++|++ |+
T Consensus 151 LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~ 228 (289)
T PRK13645 151 LSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADEVIVMHE-GK 228 (289)
T ss_pred CCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999764 899999999976 57788999999985 78
Q ss_pred EEEEcCC
Q 045902 1102 VIYAGPL 1108 (1472)
Q Consensus 1102 v~~~g~~ 1108 (1472)
+++.|+.
T Consensus 229 i~~~g~~ 235 (289)
T PRK13645 229 VISIGSP 235 (289)
T ss_pred EEEeCCH
Confidence 8888874
No 308
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.3e-34 Score=322.90 Aligned_cols=201 Identities=24% Similarity=0.326 Sum_probs=163.1
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC-CeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG-GYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~-~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~l 978 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|..++ .+.+|+|.++|.++.. ..+++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 4699999999999999999999999999999999997542 2458999999987642 234567899999988887 6
Q ss_pred CHHHHHHHHHHcCC---Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 979 TIYESLLYSAWLRL---PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~---~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
|++||+.+....+. +.+ ..++++++.+++......... .....||||||||++|||+|+.+|++|+|||||+|
T Consensus 94 tv~eni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS~G~~qrv~laral~~~p~lllLDEP~~~ 172 (246)
T PRK14269 94 SIYENISYAPKLHGMIKNKDEEEALVVDCLQKVGLFEEVKDKLK-QNALALSGGQQQRLCIARALAIKPKLLLLDEPTSA 172 (246)
T ss_pred cHHHHhhhHHhhcCcccChHHHHHHHHHHHHHcCCChhhhHHhc-CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 99999987654321 111 235667788777422111111 12357999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+.++..+.+.|+++.+ |+|||++||+++ ++.+.+|++++|++ |+++..|+.
T Consensus 173 LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~i~~l~~-G~i~~~g~~ 225 (246)
T PRK14269 173 LDPISSGVIEELLKELSH-NLSMIMVTHNMQ-QGKRVADYTAFFHL-GELIEFGES 225 (246)
T ss_pred CCHHHHHHHHHHHHHHhC-CCEEEEEecCHH-HHHhhCcEEEEEEC-CEEEEECCH
Confidence 999999999999999864 899999999976 46778999999985 789988874
No 309
>COG4618 ArpD ABC-type protease/lipase transport system, ATPase and permease components [General function prediction only]
Probab=100.00 E-value=1e-33 Score=327.90 Aligned_cols=237 Identities=27% Similarity=0.402 Sum_probs=195.8
Q ss_pred HhhcCCCCCcceEEEeeeEEEEEEecCCCcCCChhHhHHHHHHhhhhhcccccCCcccceeeeceeeEEeCCeEEEEEcC
Q 045902 128 TDRVGIEIPKIEVRFENLSIEGDAYVGTRALPTLLNTSLNAIEGVLGFLRLFPSKKRKLEILHDVSGIVKPSRMTLLLGP 207 (1472)
Q Consensus 128 ~~~~~~~~p~~~v~f~~L~v~~~~~~~~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~~ilGp 207 (1472)
-+++.++-|+-.+..|++++- + ...++++|+|+||.+.|||-++|+||
T Consensus 323 ~~~m~LP~P~g~L~Ve~l~~~-------------------------------P-Pg~~~pil~~isF~l~~G~~lgIIGP 370 (580)
T COG4618 323 AERMPLPAPQGALSVERLTAA-------------------------------P-PGQKKPILKGISFALQAGEALGIIGP 370 (580)
T ss_pred cCCCCCCCCCceeeEeeeeec-------------------------------C-CCCCCcceecceeEecCCceEEEECC
Confidence 345778888989999998862 1 12346899999999999999999999
Q ss_pred CCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCC---ceEEEEcCCCCCCCCCCHHHHHHHhhhccCCCchhHHH
Q 045902 208 PGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQ---RTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRFELL 284 (1472)
Q Consensus 208 ~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~---~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~ 284 (1472)
||||||||.++|.|..+|. +|.|.+||.+++..++. +.+||.||+-.+|+ .||.|||. |+.
T Consensus 371 SgSGKSTLaR~lvG~w~p~---~G~VRLDga~l~qWd~e~lG~hiGYLPQdVeLF~-GTIaeNIa---Rf~--------- 434 (580)
T COG4618 371 SGSGKSTLARLLVGIWPPT---SGSVRLDGADLRQWDREQLGRHIGYLPQDVELFD-GTIAENIA---RFG--------- 434 (580)
T ss_pred CCccHHHHHHHHHcccccC---CCcEEecchhhhcCCHHHhccccCcCcccceecC-CcHHHHHH---hcc---------
Confidence 9999999999999999987 99999999999887654 78999999877775 59999993 221
Q ss_pred HHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHHHHHHHHHHHHhCCCc
Q 045902 285 AELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQKKRVTTGEMLVGPAK 364 (1472)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~ 364 (1472)
++.+.++..+|+.+.|. .|. ++.|++..||.|| +-+.+||||||||+++||||+++|.
T Consensus 435 -------------~~~d~~kIieAA~lAgv-----Hel---Il~lP~GYdT~iG-~~G~~LSgGQRQRIaLARAlYG~P~ 492 (580)
T COG4618 435 -------------EEADPEKVIEAARLAGV-----HEL---ILRLPQGYDTRIG-EGGATLSGGQRQRIALARALYGDPF 492 (580)
T ss_pred -------------ccCCHHHHHHHHHHcCh-----HHH---HHhCcCCccCccC-CCCCCCCchHHHHHHHHHHHcCCCc
Confidence 11222233333333321 122 4679999999999 4677899999999999999999999
Q ss_pred EeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEecChhHHHHHH
Q 045902 365 ALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQGPREYVLDFF 437 (1472)
Q Consensus 365 illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G~~~~~~~~F 437 (1472)
+++||||-|+||+.-...+.+.|.+... +|.|+|+..|.| .+....|+|++|++|++-.+|+++|++...
T Consensus 493 lvVLDEPNsNLD~~GE~AL~~Ai~~~k~-rG~~vvviaHRP--s~L~~~Dkilvl~~G~~~~FG~r~eVLa~~ 562 (580)
T COG4618 493 LVVLDEPNSNLDSEGEAALAAAILAAKA-RGGTVVVIAHRP--SALASVDKILVLQDGRIAAFGPREEVLAKV 562 (580)
T ss_pred EEEecCCCCCcchhHHHHHHHHHHHHHH-cCCEEEEEecCH--HHHhhcceeeeecCChHHhcCCHHHHHHHh
Confidence 9999999999999999999999999865 678888887766 588899999999999999999999998754
No 310
>PRK13543 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.1e-33 Score=315.22 Aligned_cols=200 Identities=23% Similarity=0.293 Sum_probs=169.3
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|++..+ +++.+|+++|+++++||+++|+||||||||||+++|+|..++ .+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~--~~G~i~~~g~~i 75 (214)
T PRK13543 11 LLAAHALAFSR-------------NEEPVFGPLDFHVDAGEALLVQGDNGAGKTTLLRVLAGLLHV--ESGQIQIDGKTA 75 (214)
T ss_pred eEEEeeEEEec-------------CCceeeecceEEECCCCEEEEEcCCCCCHHHHHHHHhCCCCC--CCeeEEECCEEc
Confidence 46778876553 234699999999999999999999999999999999998763 589999999876
Q ss_pred ChhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-CchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHH
Q 045902 957 KQETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAV 1035 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~ 1035 (1472)
.....++.++|++|++.+++.+|+.|++.+....+. ..+...+++++.+++.+..++.+ ..||+|||||++||+
T Consensus 76 ~~~~~~~~i~~~~q~~~~~~~~t~~e~l~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~lar 150 (214)
T PRK13543 76 TRGDRSRFMAYLGHLPGLKADLSTLENLHFLCGLHGRRAKQMPGSALAIVGLAGYEDTLV-----RQLSAGQKKRLALAR 150 (214)
T ss_pred cchhhhhceEEeecCcccccCCcHHHHHHHHHHhcCCcHHHHHHHHHHHcCChhhccCCh-----hhCCHHHHHHHHHHH
Confidence 543344568999999988888999999987654432 22345677888888876666543 479999999999999
Q ss_pred HHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 045902 1036 ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1097 (1472)
Q Consensus 1036 aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~ 1097 (1472)
+|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++.
T Consensus 151 al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~tiii~sH~~~-~~~~~~~~i~~l~ 211 (214)
T PRK13543 151 LWLSPAPLWLLDEPYANLDLEGITLVNRMISAHLRGGGAALVTTHGAY-AAPPVRTRMLTLE 211 (214)
T ss_pred HHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecChh-hhhhhcceEEEEe
Confidence 999999999999999999999999999999999888999999999986 5788999999886
No 311
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=6.9e-34 Score=371.22 Aligned_cols=206 Identities=26% Similarity=0.348 Sum_probs=170.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|++|+|||.++|+||||||||||+|+|+|.++|+ +|+|.+||.+++++.. ++.++||+|++.+|+ .
T Consensus 492 ~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 567 (710)
T TIGR03796 492 PPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQPW---SGEILFDGIPREEIPREVLANSVAMVDQDIFLFE-G 567 (710)
T ss_pred CCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEeHHHCCHHHHHhheeEEecCChhhh-c
Confidence 46899999999999999999999999999999999999998 8999999999987654 578999999998885 6
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++|||.++..- . +++++.+..+.+.+ +..++ .++...||.+| +.+
T Consensus 568 Ti~eNi~l~~~~----~------------------~~~~i~~al~~~~l---------~~~i~--~lp~gl~t~i~-e~G 613 (710)
T TIGR03796 568 TVRDNLTLWDPT----I------------------PDADLVRACKDAAI---------HDVIT--SRPGGYDAELA-EGG 613 (710)
T ss_pred cHHHHhhCCCCC----C------------------CHHHHHHHHHHhCC---------HHHHH--hCcCcccceec-cCC
Confidence 999999764210 0 11122222222211 11222 35566799998 467
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
.+||||||||++||||++++|++|+||||||+||+.++.+|.+.|++ .++|+|++.|++ ++...+|+|++|++|
T Consensus 614 ~~LSGGQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~----~~~T~IiitHrl--~~i~~~D~Iivl~~G 687 (710)
T TIGR03796 614 ANLSGGQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR----RGCTCIIVAHRL--STIRDCDEIIVLERG 687 (710)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh----cCCEEEEEecCH--HHHHhCCEEEEEeCC
Confidence 88999999999999999999999999999999999999999999985 378999888876 466779999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
+++++|+++++++
T Consensus 688 ~i~~~G~~~~Ll~ 700 (710)
T TIGR03796 688 KVVQRGTHEELWA 700 (710)
T ss_pred EEEEecCHHHHHH
Confidence 9999999999864
No 312
>PRK13649 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-33 Score=323.99 Aligned_cols=205 Identities=22% Similarity=0.321 Sum_probs=166.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-------CCceEEEEcCCCC-
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-------PQRTCAYISQHDL- 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~- 257 (1472)
+++|+|+|+++++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (280)
T PRK13649 20 GRALFDVNLTIEDGSYTAFIGHTGSGKSTIMQLLNGLHVPT---QGSVRVDDTLITSTSKNKDIKQIRKKVGLVFQFPES 96 (280)
T ss_pred cceeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccCHHHHHhheEEEeeChhh
Confidence 35999999999999999999999999999999999999887 899999999876431 1356999999862
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc-ccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI-CADIM 336 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~-~~dt~ 336 (1472)
.+...||+||+.|.....+.. .. +.. ..++.+++.+||+. ..++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~~----------~~~--------------~~~~~~l~~~~l~~~~~~~~ 142 (280)
T PRK13649 97 QLFEETVLKDVAFGPQNFGVS----------QE----------EAE--------------ALAREKLALVGISESLFEKN 142 (280)
T ss_pred hhccccHHHHHHHHHHHcCCC----------HH----------HHH--------------HHHHHHHHHcCCChhhhhCC
Confidence 333479999998754321110 00 000 01345678889963 45655
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 337 VGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 337 vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .++|+|++.|++ .++.+++|++
T Consensus 143 ~~-----~LSgG~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiiivsH~~-~~~~~~~d~i 215 (280)
T PRK13649 143 PF-----ELSGGQMRRVAIAGILAMEPKILVLDEPTAGLDPKGRKELMTLFKKLHQ-SGMTIVLVTHLM-DDVANYADFV 215 (280)
T ss_pred cc-----cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeccH-HHHHHhCCEE
Confidence 54 5999999999999999999999999999999999999999999999875 478988888775 4677899999
Q ss_pred EEecCCeEEEecChhHHH
Q 045902 417 ILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~~ 434 (1472)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (280)
T PRK13649 216 YVLEKGKLVLSGKPKDIF 233 (280)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988763
No 313
>PRK11247 ssuB aliphatic sulfonates transport ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=323.22 Aligned_cols=194 Identities=22% Similarity=0.300 Sum_probs=165.8
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHHH
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVRE 266 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E 266 (1472)
.+|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|.++... ++.++|++|++.+++.+||+|
T Consensus 26 ~il~~isl~i~~Ge~~~I~G~NGsGKSTLlk~l~Gl~~p~---~G~i~~~g~~~~~~--~~~i~~v~q~~~l~~~~tv~e 100 (257)
T PRK11247 26 TVLNQLDLHIPAGQFVAVVGRSGCGKSTLLRLLAGLETPS---AGELLAGTAPLAEA--REDTRLMFQDARLLPWKKVID 100 (257)
T ss_pred ceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CeEEEECCEEHHHh--hCceEEEecCccCCCCCcHHH
Confidence 5899999999999999999999999999999999999887 89999999876432 457999999999999899999
Q ss_pred HHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCC
Q 045902 267 TLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGIS 346 (1472)
Q Consensus 267 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLS 346 (1472)
|+.+... . . .. ...+.+++.+||++..+..++ .||
T Consensus 101 nl~~~~~--~---------~---~~--------------------------~~~~~~l~~~gl~~~~~~~~~-----~LS 135 (257)
T PRK11247 101 NVGLGLK--G---------Q---WR--------------------------DAALQALAAVGLADRANEWPA-----ALS 135 (257)
T ss_pred HHHhccc--c---------h---HH--------------------------HHHHHHHHHcCChhHhcCChh-----hCC
Confidence 9987421 0 0 00 012456788899877776654 499
Q ss_pred hHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEE
Q 045902 347 GGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVY 426 (1472)
Q Consensus 347 GGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~ 426 (1472)
|||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++. ++.+++|+|++|++|++++
T Consensus 136 gGqkqrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~~~tviivsHd~~-~~~~~~d~i~~l~~G~i~~ 214 (257)
T PRK11247 136 GGQKQRVALARALIHRPGLLLLDEPLGALDALTRIEMQDLIESLWQQHGFTVLLVTHDVS-EAVAMADRVLLIEEGKIGL 214 (257)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEECCEEEe
Confidence 999999999999999999999999999999999999999999987656789888877654 6678899999999999999
Q ss_pred ecChh
Q 045902 427 QGPRE 431 (1472)
Q Consensus 427 ~G~~~ 431 (1472)
+|+.+
T Consensus 215 ~~~~~ 219 (257)
T PRK11247 215 DLTVD 219 (257)
T ss_pred ecccc
Confidence 88754
No 314
>PRK11248 tauB taurine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=321.95 Aligned_cols=201 Identities=23% Similarity=0.301 Sum_probs=167.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVR 265 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 265 (1472)
+.+|+|+|+.+++|++++|+|||||||||||++|+|.++|+ +|+|.++|+++... .+.++|++|++.+++.+||+
T Consensus 14 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~--~~~~~~v~q~~~~~~~~tv~ 88 (255)
T PRK11248 14 KPALEDINLTLESGELLVVLGPSGCGKTTLLNLIAGFVPYQ---HGSITLDGKPVEGP--GAERGVVFQNEGLLPWRNVQ 88 (255)
T ss_pred eeeEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEECCCC--CCcEEEEeCCCccCCCCcHH
Confidence 35999999999999999999999999999999999999887 89999999987642 34589999999999999999
Q ss_pred HHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCC
Q 045902 266 ETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGI 345 (1472)
Q Consensus 266 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 345 (1472)
||+.+.....+.. ..+ . ...++.+++.+||++..++.++ .|
T Consensus 89 e~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~gl~~~~~~~~~-----~L 129 (255)
T PRK11248 89 DNVAFGLQLAGVE----------KMQ----------R--------------LEIAHQMLKKVGLEGAEKRYIW-----QL 129 (255)
T ss_pred HHHHhHHHHcCCC----------HHH----------H--------------HHHHHHHHHHcCChhHhhCChh-----hC
Confidence 9998754321110 000 0 0013557889999877776655 49
Q ss_pred ChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec--CCe
Q 045902 346 SGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS--EGE 423 (1472)
Q Consensus 346 SGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~--~G~ 423 (1472)
||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|+ +|+
T Consensus 130 SgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tviivsH~~-~~~~~~~d~i~~l~~~~G~ 208 (255)
T PRK11248 130 SGGQRQRVGIARALAANPQLLLLDEPFGALDAFTREQMQTLLLKLWQETGKQVLLITHDI-EEAVFMATELVLLSPGPGR 208 (255)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEeCCCcE
Confidence 999999999999999999999999999999999999999999998655578888887765 47788999999998 599
Q ss_pred EEEecChh
Q 045902 424 IVYQGPRE 431 (1472)
Q Consensus 424 iv~~G~~~ 431 (1472)
++..++.+
T Consensus 209 i~~~~~~~ 216 (255)
T PRK11248 209 VVERLPLN 216 (255)
T ss_pred EEEEecCC
Confidence 99988753
No 315
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8.1e-34 Score=316.62 Aligned_cols=194 Identities=24% Similarity=0.372 Sum_probs=161.1
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-------hcccceeEEeccCCC
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-------ETFARISGYCEQNDI 973 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-------~~~~~~~gyv~Q~~~ 973 (1472)
+++.+ |||++|++ |+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.
T Consensus 11 ~~~~~--~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~ 85 (214)
T cd03297 11 PDFTL--KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEK--PDGGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYA 85 (214)
T ss_pred CCeee--CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEecccccchhhhhhHhhcEEEEecCCc
Confidence 33445 99999999 9999999999999999999999876 358999999987531 123567899999999
Q ss_pred CCCCCCHHHHHHHHHHcCCC--chHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 045902 974 HSPNVTIYESLLYSAWLRLP--KDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1051 (1472)
Q Consensus 974 ~~~~lTv~e~l~~~~~l~~~--~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTs 1051 (1472)
+++.+|+.||+.+......+ .+..++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+
T Consensus 86 ~~~~~t~~~~l~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~qrv~la~al~~~p~llllDEPt~ 160 (214)
T cd03297 86 LFPHLNVRENLAFGLKRKRNREDRISVDELLDLLGLDHLLNRY-----PAQLSGGEKQRVALARALAAQPELLLLDEPFS 160 (214)
T ss_pred cCCCCCHHHHHHHHHhhCCHHHHHHHHHHHHHHcCCHhHhhcC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 88899999999876432211 123466778888887655543 34799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1052 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
|||+.++..+.+.|++++++ |+|||++||+++ ++.+.+|++++|++ |+++..|
T Consensus 161 ~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 214 (214)
T cd03297 161 ALDRALRLQLLPELKQIKKNLNIPVIFVTHDLS-EAEYLADRIVVMED-GRLQYIG 214 (214)
T ss_pred cCCHHHHHHHHHHHHHHHHHcCcEEEEEecCHH-HHHHhcCEEEEEEC-CEEEecC
Confidence 99999999999999999875 899999999976 46678999999985 6777654
No 316
>PRK11308 dppF dipeptide transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.6e-33 Score=331.98 Aligned_cols=221 Identities=23% Similarity=0.248 Sum_probs=174.6
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+...... . ...+...+|+|||++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.++
T Consensus 5 ~l~v~nl~~~~~~~~~~--~-~~~~~~~~l~~vsl~i~~Ge~~~IvG~sGsGKSTLl~~l~gl~~p--~~G~i~~~g~~l 79 (327)
T PRK11308 5 LLQAIDLKKHYPVKRGL--F-KPERLVKALDGVSFTLERGKTLAVVGESGCGKSTLARLLTMIETP--TGGELYYQGQDL 79 (327)
T ss_pred eEEEeeeEEEEcCCCCc--c-ccCCceeEEeeeEEEECCCCEEEEECCCCCcHHHHHHHHHcCCCC--CCcEEEECCEEc
Confidence 46778887665321100 0 001125799999999999999999999999999999999998763 589999999876
Q ss_pred Ch------hcccceeEEeccCC--CCCCCCCHHHHHHHHHHcC--CCch---HHHHHHHHHccccc-ccccccCCCCCCC
Q 045902 957 KQ------ETFARISGYCEQND--IHSPNVTIYESLLYSAWLR--LPKD---MFVEEVMELVEMKA-LRNSLVGLPGVDG 1022 (1472)
Q Consensus 957 ~~------~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~--~~~~---~~~~~v~~~l~l~~-~~~~~~~~~~~~~ 1022 (1472)
.. ..+++.++|++|++ .+.|.+|+.+++....... .... ..+.++++.+++.. ..+.. +..
T Consensus 80 ~~~~~~~~~~~r~~i~~v~Q~~~~~l~p~~~v~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----p~~ 154 (327)
T PRK11308 80 LKADPEAQKLLRQKIQIVFQNPYGSLNPRKKVGQILEEPLLINTSLSAAERREKALAMMAKVGLRPEHYDRY-----PHM 154 (327)
T ss_pred CcCCHHHHHHHhCCEEEEEcCchhhcCCccCHHHHHHHHHHHccCCCHHHHHHHHHHHHHHCCCChHHhcCC-----Ccc
Confidence 32 13456799999997 5788999999987654332 2222 34567777777742 33332 357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGH 1101 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~ 1101 (1472)
||||||||++||+||+.+|++|++||||+|||+.++..|+++|+++.++ |.|||++||+++ .+.+.+|++++|.+ |+
T Consensus 155 LSgGq~QRv~iArAL~~~P~lLilDEPts~LD~~~~~~i~~lL~~l~~~~g~til~iTHdl~-~~~~~adrv~vm~~-G~ 232 (327)
T PRK11308 155 FSGGQRQRIAIARALMLDPDVVVADEPVSALDVSVQAQVLNLMMDLQQELGLSYVFISHDLS-VVEHIADEVMVMYL-GR 232 (327)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEECCCccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 9999999999999999999999999999999999999999999999764 999999999976 35668999999985 79
Q ss_pred EEEEcCCC
Q 045902 1102 VIYAGPLG 1109 (1472)
Q Consensus 1102 v~~~g~~~ 1109 (1472)
++..|+..
T Consensus 233 ive~g~~~ 240 (327)
T PRK11308 233 CVEKGTKE 240 (327)
T ss_pred EEEECCHH
Confidence 99999853
No 317
>PRK13633 cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.1e-33 Score=328.02 Aligned_cols=215 Identities=23% Similarity=0.306 Sum_probs=173.7
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.++... ....+.+|+|||++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~~~-------~~~~~~vl~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--~~~G~i~i~g~~i 74 (280)
T PRK13633 4 MIKCKNVSYKYESNE-------ESTEKLALDDVNLEVKKGEFLVILGRNGSGKSTIAKHMNALLI--PSEGKVYVDGLDT 74 (280)
T ss_pred eEEEeeeEEEcCCCC-------CCCCcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEec
Confidence 366778776653100 0012469999999999999999999999999999999999877 4589999999876
Q ss_pred Ch----hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcC-CCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHH
Q 045902 957 KQ----ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLR-LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQ 1027 (1472)
Q Consensus 957 ~~----~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~-~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGq 1027 (1472)
.. ...++.+||++|++. .+...||.|++.|..... .+. +..++++++.+++.+..++.. ..|||||
T Consensus 75 ~~~~~~~~~~~~i~~v~q~~~~~~~~~~v~~~l~~~~~~~~~~~~~~~~~~~~~l~~~gL~~~~~~~~-----~~LS~G~ 149 (280)
T PRK13633 75 SDEENLWDIRNKAGMVFQNPDNQIVATIVEEDVAFGPENLGIPPEEIRERVDESLKKVGMYEYRRHAP-----HLLSGGQ 149 (280)
T ss_pred cccccHHHHhhheEEEecChhhhhccccHHHHHHhhHhhcCCCHHHHHHHHHHHHHHCCCHhHhhCCc-----ccCCHHH
Confidence 42 234567999999974 233569999998865432 222 245677888888887766654 4799999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1028 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1028 rqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
|||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++. + ..+|++++|++ |+++..|
T Consensus 150 ~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvtH~~~~-~-~~~d~v~~l~~-G~i~~~g 226 (280)
T PRK13633 150 KQRVAIAGILAMRPECIIFDEPTAMLDPSGRREVVNTIKELNKKYGITIILITHYMEE-A-VEADRIIVMDS-GKVVMEG 226 (280)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecChHH-H-hcCCEEEEEEC-CEEEEec
Confidence 99999999999999999999999999999999999999999764 9999999999873 4 45999999985 7888888
Q ss_pred CC
Q 045902 1107 PL 1108 (1472)
Q Consensus 1107 ~~ 1108 (1472)
+.
T Consensus 227 ~~ 228 (280)
T PRK13633 227 TP 228 (280)
T ss_pred CH
Confidence 75
No 318
>TIGR02769 nickel_nikE nickel import ATP-binding protein NikE. This family represents the NikE subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase.
Probab=100.00 E-value=2.1e-33 Score=323.32 Aligned_cols=208 Identities=24% Similarity=0.330 Sum_probs=170.1
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCC--
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHD-- 256 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d-- 256 (1472)
.+.+|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|++
T Consensus 23 ~~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~ 99 (265)
T TIGR02769 23 RAPVLTNVSLSIEEGETVGLLGRSGCGKSTLARLLLGLEKPA---QGTVSFRGQDLYQLDRKQRRAFRRDVQLVFQDSPS 99 (265)
T ss_pred ceEEeeCceeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEccccCHHHHHHHhhceEEEecChhh
Confidence 356999999999999999999999999999999999999887 8999999998765422 35699999996
Q ss_pred CCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-ccccc
Q 045902 257 LHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADI 335 (1472)
Q Consensus 257 ~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 335 (1472)
.+.+.+||+||+.+...... .....+ . ...++.+++.+||+ ...|.
T Consensus 100 ~~~~~~tv~~~l~~~~~~~~---------~~~~~~----------~--------------~~~~~~~l~~~gl~~~~~~~ 146 (265)
T TIGR02769 100 AVNPRMTVRQIIGEPLRHLT---------SLDESE----------Q--------------KARIAELLDMVGLRSEDADK 146 (265)
T ss_pred hcCCCCCHHHHHHHHHHHhc---------CCCHHH----------H--------------HHHHHHHHHHcCCChhhhhC
Confidence 46678999999976432100 000000 0 01134578889996 56665
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
.++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ ..+.+++|+
T Consensus 147 ~~~-----~LSgGe~qrv~laral~~~p~illLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tiiivsH~~-~~~~~~~d~ 220 (265)
T TIGR02769 147 LPR-----QLSGGQLQRINIARALAVKPKLIVLDEAVSNLDMVLQAVILELLRKLQQAFGTAYLFITHDL-RLVQSFCQR 220 (265)
T ss_pred Chh-----hCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCH-HHHHHHhcE
Confidence 554 59999999999999999999999999999999999999999999998875578888887765 467789999
Q ss_pred EEEecCCeEEEecChhHHH
Q 045902 416 IILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~ 434 (1472)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (265)
T TIGR02769 221 VAVMDKGQIVEECDVAQLL 239 (265)
T ss_pred EEEEeCCEEEEECCHHHHc
Confidence 9999999999999988764
No 319
>PRK13636 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=327.43 Aligned_cols=207 Identities=27% Similarity=0.347 Sum_probs=170.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCC--CC---CCceEEEEcCCCC-CC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTE--FV---PQRTCAYISQHDL-HH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~--~~---~~~~~~yv~Q~d~-~~ 259 (1472)
+.+|+|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|+++.. .. .++.++|++|++. .+
T Consensus 19 ~~~l~~vs~~i~~Ge~~~i~G~nGaGKSTLl~~i~Gl~~p~---~G~i~i~g~~~~~~~~~~~~~~~~ig~v~q~~~~~~ 95 (283)
T PRK13636 19 THALKGININIKKGEVTAILGGNGAGKSTLFQNLNGILKPS---SGRILFDGKPIDYSRKGLMKLRESVGMVFQDPDNQL 95 (283)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ccEEEECCEECCCCcchHHHHHhhEEEEecCcchhh
Confidence 35999999999999999999999999999999999999887 8999999998742 11 2357999999863 34
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
...||+||+.+.....+.. ..+ . ...++.+++.+||.+..|+.+++
T Consensus 96 ~~~tv~e~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~gL~~~~~~~~~~ 141 (283)
T PRK13636 96 FSASVYQDVSFGAVNLKLP----------EDE----------V--------------RKRVDNALKRTGIEHLKDKPTHC 141 (283)
T ss_pred ccccHHHHHHhHHHHcCCC----------HHH----------H--------------HHHHHHHHHHCCChhhhhCCccc
Confidence 5689999998754321110 000 0 00235678899998877776654
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++.|++ .++.+++|++++|
T Consensus 142 -----LS~G~~qrl~laraL~~~p~lLilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tillvsH~~-~~~~~~~dri~~l 215 (283)
T PRK13636 142 -----LSFGQKKRVAIAGVLVMEPKVLVLDEPTAGLDPMGVSEIMKLLVEMQKELGLTIIIATHDI-DIVPLYCDNVFVM 215 (283)
T ss_pred -----CCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHHhCCCEEEEEecCH-HHHHHhCCEEEEE
Confidence 9999999999999999999999999999999999999999999999875588988887765 4677899999999
Q ss_pred cCCeEEEecChhHHHH
Q 045902 420 SEGEIVYQGPREYVLD 435 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~~ 435 (1472)
++|++++.|+.+++..
T Consensus 216 ~~G~i~~~g~~~~~~~ 231 (283)
T PRK13636 216 KEGRVILQGNPKEVFA 231 (283)
T ss_pred ECCEEEEeCCHHHHhc
Confidence 9999999999988653
No 320
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-33 Score=321.20 Aligned_cols=212 Identities=24% Similarity=0.359 Sum_probs=167.6
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISGY 954 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G~ 954 (1472)
+.++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~ 70 (250)
T PRK14240 4 ISVKDLDLFYG-------------DFQALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQ 70 (250)
T ss_pred EEEEEEEEEEC-------------CceeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCE
Confidence 56777766542 246999999999999999999999999999999999975421 24899999998
Q ss_pred cCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cc---hHHHHHHHHHccccc-ccccccCCCCCCCC
Q 045902 955 PKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PK---DMFVEEVMELVEMKA-LRNSLVGLPGVDGL 1023 (1472)
Q Consensus 955 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~---~~~~~~v~~~l~l~~-~~~~~~~~~~~~~L 1023 (1472)
++.. ...++.++|++|++.+++ .|+.||+.+....+. +. ++.++++++.+++.+ +.+. ... .+..|
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~t~~~ni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~-~~~-~~~~L 147 (250)
T PRK14240 71 DIYKSDIDVNQLRKRVGMVFQQPNPFP-MSIYDNVAYGPRTHGIKDKKKLDEIVEKSLKGAALWDEVKDR-LKK-SALGL 147 (250)
T ss_pred EccccccchHHHhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCchhhHHH-Hhc-CCCCC
Confidence 7642 234567899999988877 899999988654332 11 134556666666532 1111 111 23579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|++ |+++
T Consensus 148 S~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~v~~l~~-G~i~ 224 (250)
T PRK14240 148 SGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK-DYTIVIVTHNMQ-QASRISDKTAFFLN-GEIV 224 (250)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEEeCHH-HHHhhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999954 799999999975 47788999999986 7888
Q ss_pred EEcCC
Q 045902 1104 YAGPL 1108 (1472)
Q Consensus 1104 ~~g~~ 1108 (1472)
..|+.
T Consensus 225 ~~~~~ 229 (250)
T PRK14240 225 EFGDT 229 (250)
T ss_pred EeCCH
Confidence 88864
No 321
>TIGR03005 ectoine_ehuA ectoine/hydroxyectoine ABC transporter, ATP-binding protein. Members of this family are the ATP-binding protein of a conserved four gene ABC transporter operon found next to ectoine unilization operons and ectoine biosynthesis operons. Ectoine is a compatible solute that protects enzymes from high osmolarity. It is released by some species in response to hypoosmotic shock, and it is taken up by a number of bacteria as a compatible solute or for consumption. This family shows strong sequence similiarity to a number of amino acid ABC transporter ATP-binding proteins.
Probab=100.00 E-value=2.1e-33 Score=321.17 Aligned_cols=206 Identities=25% Similarity=0.365 Sum_probs=171.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC----------------CCceE
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV----------------PQRTC 249 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~----------------~~~~~ 249 (1472)
+++|+|+|+++++||+++|+||||||||||+++|+|.++++ +|+|.++|.++.... .++.+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~i 89 (252)
T TIGR03005 13 LTVLDGLNFSVAAGEKVALIGPSGSGKSTILRILMTLEPID---EGQIQVEGEQLYHMPGRNGPLVPADEKHLRQMRNKI 89 (252)
T ss_pred eeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccccccchhHHHHHhhCe
Confidence 36999999999999999999999999999999999999887 899999999875421 14579
Q ss_pred EEEcCCCCCCCCCCHHHHHHHhhhc-cCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhC
Q 045902 250 AYISQHDLHHGEMTVRETLDFSGRC-LGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILG 328 (1472)
Q Consensus 250 ~yv~Q~d~~~~~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lg 328 (1472)
+|++|++.+++.+||.||+.++... .+.. . .+.+ ..++.+++.+|
T Consensus 90 ~~v~q~~~~~~~~tv~~nl~~~~~~~~~~~----------~----------~~~~--------------~~~~~~l~~~g 135 (252)
T TIGR03005 90 GMVFQSFNLFPHKTVLDNVTEAPVLVLGMA----------R----------AEAE--------------KRAMELLDMVG 135 (252)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhcCCC----------H----------HHHH--------------HHHHHHHHHcC
Confidence 9999999999999999999875321 0000 0 0000 01345788899
Q ss_pred CcccccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcch
Q 045902 329 LDICADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPE 408 (1472)
Q Consensus 329 L~~~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~ 408 (1472)
+++..+..+ ..||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. +
T Consensus 136 l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tiiivsH~~~-~ 209 (252)
T TIGR03005 136 LADKADHMP-----AQLSGGQQQRVAIARALAMRPKVMLFDEVTSALDPELVGEVLNVIRRLASEHDLTMLLVTHEMG-F 209 (252)
T ss_pred ChhHhhcCh-----hhcCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-H
Confidence 987776655 4599999999999999999999999999999999999999999999987755788888887764 6
Q ss_pred HHhccCeEEEecCCeEEEecChhHHH
Q 045902 409 TYDLFDDIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 409 ~~~~fD~iilL~~G~iv~~G~~~~~~ 434 (1472)
+.+++|++++|++|++++.|+.+++.
T Consensus 210 ~~~~~d~i~~l~~G~i~~~g~~~~~~ 235 (252)
T TIGR03005 210 AREFADRVCFFDKGRIVEQGKPDEIF 235 (252)
T ss_pred HHHhcCEEEEEECCEEEEeCCHHHHh
Confidence 77899999999999999999987763
No 322
>cd03231 ABC_CcmA_heme_exporter CcmA, the ATP-binding component of the bacterial CcmAB transporter. The CCM family is involved in bacterial cytochrome c biogenesis. Cytochrome c maturation in E. coli requires the ccm operon, which encodes eight membrane proteins (CcmABCDEFGH). CcmE is a periplasmic heme chaperone that binds heme covalently and transfers it onto apocytochrome c in the presence of CcmF, CcmG, and CcmH. The CcmAB proteins represent an ABC transporter and the CcmCD proteins participate in heme transfer to CcmE.
Probab=100.00 E-value=9.5e-34 Score=312.76 Aligned_cols=185 Identities=26% Similarity=0.330 Sum_probs=159.8
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
++.+|+|+|++|++||++||+|+||||||||+++|+|..++ .+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~--~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (201)
T cd03231 12 GRALFSGLSFTLAAGEALQVTGPNGSGKTTLLRILAGLSPP--LAGRVLLNGGPLDFQRDSIARGLLYLGHAPGIKTTLS 89 (201)
T ss_pred CceeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEecccccHHhhhheEEeccccccCCCcC
Confidence 35699999999999999999999999999999999998763 58999999987532 334567899999998888999
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 045902 980 IYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1059 (1472)
Q Consensus 980 v~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~ 1059 (1472)
++|++.+.... ..++.++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 90 v~e~l~~~~~~--~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~ 162 (201)
T cd03231 90 VLENLRFWHAD--HSDEQVEEALARVGLNGFEDRPV-----AQLSAGQQRRVALARLLLSGRPLWILDEPTTALDKAGVA 162 (201)
T ss_pred HHHHHHhhccc--ccHHHHHHHHHHcCChhhhcCch-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHH
Confidence 99999875322 13456788899999987666543 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEE
Q 045902 1060 IVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLM 1096 (1472)
Q Consensus 1060 ~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l 1096 (1472)
.+++.|+++.++|+|+|++||++. +....+|+++.+
T Consensus 163 ~l~~~l~~~~~~g~tiii~sH~~~-~~~~~~~~~~~~ 198 (201)
T cd03231 163 RFAEAMAGHCARGGMVVLTTHQDL-GLSEAGARELDL 198 (201)
T ss_pred HHHHHHHHHHhCCCEEEEEecCch-hhhhccceeEec
Confidence 999999998877999999999976 577788888776
No 323
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=332.71 Aligned_cols=218 Identities=16% Similarity=0.245 Sum_probs=171.4
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--CeeEEEEEEcCcc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--GYIEGSISISGYP 955 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~~~~G~i~i~G~~ 955 (1472)
+.++|++..+... .+...+|+||||+|++||++||+|+||||||||+++|+|..++ .+.+|+|.++|.+
T Consensus 4 L~v~~l~~~y~~~---------~~~~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~ 74 (330)
T PRK15093 4 LDIRNLTIEFKTS---------DGWVKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDID 74 (330)
T ss_pred EEEeeeEEEEeCC---------CCCEEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEE
Confidence 5677776655321 1235699999999999999999999999999999999998652 2458999999987
Q ss_pred CCh---hc----ccceeEEeccCCC--CCCCCCHHHHHHHHHHc---CC---Cc----hHHHHHHHHHcccccccccccC
Q 045902 956 KKQ---ET----FARISGYCEQNDI--HSPNVTIYESLLYSAWL---RL---PK----DMFVEEVMELVEMKALRNSLVG 1016 (1472)
Q Consensus 956 ~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l---~~---~~----~~~~~~v~~~l~l~~~~~~~~~ 1016 (1472)
+.. .. +++.++|++|++. +.|.+||.+++.+.... .. .. ...+.++++.++|.+..+....
T Consensus 75 i~~~~~~~~~~~~~~~i~~v~Q~~~~~l~p~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~gL~~~~~~~~~ 154 (330)
T PRK15093 75 LLRLSPRERRKLVGHNVSMIFQEPQSCLDPSERVGRQLMQNIPGWTYKGRWWQRFGWRKRRAIELLHRVGIKDHKDAMRS 154 (330)
T ss_pred CCcCCHHHHHHHhCCCEEEEecCcchhcCccccHHHHHHHHHHhhhccccccccHHHHHHHHHHHHHHCCCCChHHHHhC
Confidence 532 11 1346899999975 56889999999753221 00 11 1345677888887643222212
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEE
Q 045902 1017 LPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFL 1095 (1472)
Q Consensus 1017 ~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~ 1095 (1472)
. +..|||||||||+||+||+.+|+||+|||||+|||+.++..+++.|+++.++ |.|||++|||++ .+.+.+|++++
T Consensus 155 ~--p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHdl~-~v~~~~dri~v 231 (330)
T PRK15093 155 F--PYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHDLQ-MLSQWADKINV 231 (330)
T ss_pred C--chhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEE
Confidence 2 3579999999999999999999999999999999999999999999999875 899999999976 46678999999
Q ss_pred EecCcEEEEEcCC
Q 045902 1096 MKRGGHVIYAGPL 1108 (1472)
Q Consensus 1096 l~~gg~v~~~g~~ 1108 (1472)
|.+ |++++.|+.
T Consensus 232 m~~-G~ive~g~~ 243 (330)
T PRK15093 232 LYC-GQTVETAPS 243 (330)
T ss_pred EEC-CEEEEECCH
Confidence 985 799999975
No 324
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.8e-33 Score=318.24 Aligned_cols=195 Identities=28% Similarity=0.403 Sum_probs=166.1
Q ss_pred eeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-hcccceeEEeccCCCCCCCCCHHHH
Q 045902 905 LLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-ETFARISGYCEQNDIHSPNVTIYES 983 (1472)
Q Consensus 905 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-~~~~~~~gyv~Q~~~~~~~lTv~e~ 983 (1472)
+|+|+|++|+|||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++.+|+.||
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~--p~~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e~ 91 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIK--PDSGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYKN 91 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHHH
Confidence 7999999999999999999999999999999999876 458999999987643 1234678999999999999999999
Q ss_pred HHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 045902 984 LLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1059 (1472)
Q Consensus 984 l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~ 1059 (1472)
+.+...... ... ..+.++++.+++.+..++.+ ..||||||||++||++|+.+|++++|||||+|||+.++.
T Consensus 92 l~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~ 166 (235)
T cd03299 92 IAYGLKKRKVDKKEIERKVLEIAEMLGIDHLLNRKP-----ETLSGGEQQRVAIARALVVNPKILLLDEPFSALDVRTKE 166 (235)
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCChhHHhcCc-----ccCCHHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHH
Confidence 987643321 111 23566788888876666553 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1060 IVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1060 ~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
.+.+.|++++.+ |+|||+++|++. ++.+.+|++++|++ |+++..|+.
T Consensus 167 ~l~~~l~~~~~~~~~tili~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 214 (235)
T cd03299 167 KLREELKKIRKEFGVTVLHVTHDFE-EAWALADKVAIMLN-GKLIQVGKP 214 (235)
T ss_pred HHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEecCH
Confidence 999999998765 999999999976 46778999999985 788888875
No 325
>PRK13549 xylose transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-33 Score=355.09 Aligned_cols=214 Identities=21% Similarity=0.332 Sum_probs=178.4
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+||||+|++||++||+||||||||||+++|+|..++++.+|+|.++|.+.
T Consensus 5 ~l~~~nl~~~~-------------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~ 71 (506)
T PRK13549 5 LLEMKNITKTF-------------GGVKALDNVSLKVRAGEIVSLCGENGAGKSTLMKVLSGVYPHGTYEGEIIFEGEEL 71 (506)
T ss_pred eEEEeeeEEEe-------------CCeEeecceeEEEeCCeEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEEC
Confidence 36677776654 23569999999999999999999999999999999999876433589999999876
Q ss_pred Chh----cccceeEEeccCCCCCCCCCHHHHHHHHHHcC----CCch---HHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 957 KQE----TFARISGYCEQNDIHSPNVTIYESLLYSAWLR----LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 957 ~~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~----~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
... ..++.+||++|++.+++.+||+|++.+....+ .+.+ ..++++++.+++.+..++.+ ..|||
T Consensus 72 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 146 (506)
T PRK13549 72 QASNIRDTERAGIAIIHQELALVKELSVLENIFLGNEITPGGIMDYDAMYLRAQKLLAQLKLDINPATPV-----GNLGL 146 (506)
T ss_pred CCCCHHHHHHCCeEEEEeccccCCCCcHHHHhhhcccccccCCcCHHHHHHHHHHHHHHcCCCCCcccch-----hhCCH
Confidence 421 12456899999998899999999998865322 1111 34677888888876666553 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
|||||++||++|+.+|++|||||||+|||+.++..+++.|++++++|.|||++||+++ ++.+.||++++|++ |++++.
T Consensus 147 Gqkqrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvi~~tH~~~-~~~~~~d~v~~l~~-G~i~~~ 224 (506)
T PRK13549 147 GQQQLVEIAKALNKQARLLILDEPTASLTESETAVLLDIIRDLKAHGIACIYISHKLN-EVKAISDTICVIRD-GRHIGT 224 (506)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCcHH-HHHHhcCEEEEEEC-CEEeee
Confidence 9999999999999999999999999999999999999999999877999999999976 46678999999985 789898
Q ss_pred cCCCc
Q 045902 1106 GPLGR 1110 (1472)
Q Consensus 1106 g~~~~ 1110 (1472)
|+..+
T Consensus 225 ~~~~~ 229 (506)
T PRK13549 225 RPAAG 229 (506)
T ss_pred ccccc
Confidence 88754
No 326
>PRK11144 modC molybdate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.2e-33 Score=336.95 Aligned_cols=195 Identities=25% Similarity=0.409 Sum_probs=169.3
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCC------C-CCceEEEEcCCCCCCCCCC
Q 045902 191 DVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEF------V-PQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 191 ~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~------~-~~~~~~yv~Q~d~~~~~lT 263 (1472)
|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|+++... . .++.++|++|+..+++.+|
T Consensus 16 ~vsl~i~~Ge~~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~~~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 92 (352)
T PRK11144 16 TVNLTLPAQGITAIFGRSGAGKTSLINAISGLTRPQ---KGRIVLNGRVLFDAEKGICLPPEKRRIGYVFQDARLFPHYK 92 (352)
T ss_pred EEEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEccccccccccchhhCCEEEEcCCcccCCCCc
Confidence 899999999999999999999999999999999887 89999999987531 1 2467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.|+.+. . .. ..++.+++.+||++..|..++
T Consensus 93 v~enl~~~~~~-----------~--~~---------------------------~~~~~~l~~~gl~~~~~~~~~----- 127 (352)
T PRK11144 93 VRGNLRYGMAK-----------S--MV---------------------------AQFDKIVALLGIEPLLDRYPG----- 127 (352)
T ss_pred HHHHHHhhhhh-----------h--hH---------------------------HHHHHHHHHcCCchhhhCCcc-----
Confidence 99999875310 0 00 013557889999888777665
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+..+.|+|++.|++ .++.+++|++++|++|+
T Consensus 128 ~LSgGq~qRvalaraL~~~p~llLLDEPts~LD~~~~~~l~~~L~~l~~~~g~tii~vTHd~-~~~~~~~d~i~~l~~G~ 206 (352)
T PRK11144 128 SLSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKRELLPYLERLAREINIPILYVSHSL-DEILRLADRVVVLEQGK 206 (352)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCeEEEEecCH-HHHHHhCCEEEEEeCCE
Confidence 49999999999999999999999999999999999999999999999876678888887765 47889999999999999
Q ss_pred EEEecChhHHH
Q 045902 424 IVYQGPREYVL 434 (1472)
Q Consensus 424 iv~~G~~~~~~ 434 (1472)
++..|+++++.
T Consensus 207 i~~~g~~~~i~ 217 (352)
T PRK11144 207 VKAFGPLEEVW 217 (352)
T ss_pred EEEecCHHHHH
Confidence 99999998874
No 327
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=5.1e-34 Score=287.00 Aligned_cols=195 Identities=28% Similarity=0.422 Sum_probs=165.1
Q ss_pred cccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---h----cccceeEEeccCC
Q 045902 900 ENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---E----TFARISGYCEQND 972 (1472)
Q Consensus 900 ~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~----~~~~~~gyv~Q~~ 972 (1472)
.....||++|++.|++||-+||+|||||||||||-+|+|+.. +.+|+|.+.|++... + -..+.+|+|+|..
T Consensus 20 ~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~--~ssGeV~l~G~~L~~ldEd~rA~~R~~~vGfVFQSF 97 (228)
T COG4181 20 EGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDD--PSSGEVRLLGQPLHKLDEDARAALRARHVGFVFQSF 97 (228)
T ss_pred CcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCC--CCCceEEEcCcchhhcCHHHHHHhhccceeEEEEee
Confidence 455789999999999999999999999999999999999876 458999999998632 1 2346799999999
Q ss_pred CCCCCCCHHHHHHHHHHcCCC--ch--HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 045902 973 IHSPNVTIYESLLYSAWLRLP--KD--MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE 1048 (1472)
Q Consensus 973 ~~~~~lTv~e~l~~~~~l~~~--~~--~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDE 1048 (1472)
.+.|++|..||+.....++.. .+ ....+.++.+||.+ ++...| .+|||||+|||+||||++..|+|||.||
T Consensus 98 ~Lip~ltAlENV~lPleL~ge~~~~~~~~A~~lL~~vGLg~---Rl~HyP--~qLSGGEQQRVAiARAfa~~P~vLfADE 172 (228)
T COG4181 98 HLIPNLTALENVALPLELRGESSADSRAGAKALLEAVGLGK---RLTHYP--AQLSGGEQQRVALARAFAGRPDVLFADE 172 (228)
T ss_pred eccccchhhhhccchhhhcCCccccHHHHHHHHHHHhCccc---ccccCc--cccCchHHHHHHHHHHhcCCCCEEeccC
Confidence 999999999999988888762 22 23456677777654 333344 4799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1049 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1049 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
||-+||..+...|.+++-.+.++ |.|.|++||||. +...|||.+-|.. |+++.
T Consensus 173 PTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc~R~~r~~~-G~l~~ 226 (228)
T COG4181 173 PTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARCDRQLRLRS-GRLVE 226 (228)
T ss_pred CCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhhhheeeeec-ceecc
Confidence 99999999999999999998654 999999999975 6788999999986 67653
No 328
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.5e-33 Score=326.94 Aligned_cols=213 Identities=24% Similarity=0.334 Sum_probs=173.1
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCe-eEEEEEEcCcc
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGY-IEGSISISGYP 955 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~-~~G~i~i~G~~ 955 (1472)
.+.++|+++..+. ..+.+|+|||++|++||++||+||||||||||+++|+|..++.. .+|+|.++|.+
T Consensus 5 ~l~i~~l~~~~~~-----------~~~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~ 73 (282)
T PRK13640 5 IVEFKHVSFTYPD-----------SKKPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGIT 73 (282)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEE
Confidence 4677887765421 12459999999999999999999999999999999999876421 13999999988
Q ss_pred CCh---hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHH
Q 045902 956 KKQ---ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQ 1027 (1472)
Q Consensus 956 ~~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGq 1027 (1472)
... ...++.+||++|++. .++..||.||+.|...... ... +.++++++.+++.+..+... +.|||||
T Consensus 74 ~~~~~~~~~~~~ig~v~q~~~~~~~~~tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~~~~~~-----~~LS~G~ 148 (282)
T PRK13640 74 LTAKTVWDIREKVGIVFQNPDNQFVGATVGDDVAFGLENRAVPRPEMIKIVRDVLADVGMLDYIDSEP-----ANLSGGQ 148 (282)
T ss_pred CCcCCHHHHHhheEEEEECHHHhhccCCHHHHHHhhHHhCCCCHHHHHHHHHHHHHHCCChhHhcCCc-----ccCCHHH
Confidence 643 234567899999974 5678999999987643322 221 34567788888876666543 5799999
Q ss_pred HHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1028 RKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1028 rqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
|||++||+||+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++. + +.||++++|++ |+++..|
T Consensus 149 ~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~~-~-~~~d~i~~l~~-G~i~~~g 225 (282)
T PRK13640 149 KQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDIDE-A-NMADQVLVLDD-GKLLAQG 225 (282)
T ss_pred HHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHHH-H-HhCCEEEEEEC-CEEEEeC
Confidence 99999999999999999999999999999999999999999865 8999999999763 4 67999999985 7899888
Q ss_pred CC
Q 045902 1107 PL 1108 (1472)
Q Consensus 1107 ~~ 1108 (1472)
+.
T Consensus 226 ~~ 227 (282)
T PRK13640 226 SP 227 (282)
T ss_pred CH
Confidence 75
No 329
>TIGR02142 modC_ABC molybdenum ABC transporter, ATP-binding protein. This model represents the ATP-binding cassette (ABC) protein of the three subunit molybdate ABC transporter. The three proteins of this complex are homologous to proteins of the sulfate ABC transporter. Molybdenum may be used in nitrogenases of nitrogen-fixing bacteria and in molybdopterin cofactors. In some cases, molybdate may be transported by a sulfate transporter rather than by a specific molybdate transporter.
Probab=100.00 E-value=1.8e-33 Score=335.97 Aligned_cols=199 Identities=24% Similarity=0.434 Sum_probs=169.9
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-------CCceEEEEcCCCCCCCCCC
Q 045902 191 DVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-------PQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 191 ~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 263 (1472)
|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 15 ~isl~i~~Gei~~l~G~nGsGKSTLl~~iaGl~~p~---~G~I~~~g~~i~~~~~~~~~~~~~~~i~~v~q~~~l~~~~t 91 (354)
T TIGR02142 15 DADFTLPGQGVTAIFGRSGSGKTTLIRLIAGLTRPD---EGEIVLNGRTLFDSRKGIFLPPEKRRIGYVFQEARLFPHLS 91 (354)
T ss_pred EEEEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEECccCccccccchhhCCeEEEecCCccCCCCc
Confidence 899999999999999999999999999999999887 899999999875321 2467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.|+.+... ..+. ...++.+++.+||++..|+.+.+
T Consensus 92 v~enl~~~~~~~~------------~~~~------------------------~~~~~~~l~~~gL~~~~~~~~~~---- 131 (354)
T TIGR02142 92 VRGNLRYGMKRAR------------PSER------------------------RISFERVIELLGIGHLLGRLPGR---- 131 (354)
T ss_pred HHHHHHHHhhccC------------hhHH------------------------HHHHHHHHHHcCChhHhcCChhh----
Confidence 9999988643110 0000 00135678899999888876654
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|+
T Consensus 132 -LSgGqkqRvalAraL~~~p~lllLDEPts~LD~~~~~~l~~~L~~l~~~~g~tiiivtH~~-~~~~~~~d~i~~l~~G~ 209 (354)
T TIGR02142 132 -LSGGEKQRVAIGRALLSSPRLLLMDEPLAALDDPRKYEILPYLERLHAEFGIPILYVSHSL-QEVLRLADRVVVLEDGR 209 (354)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEeCCE
Confidence 9999999999999999999999999999999999999999999999876678888888765 47788999999999999
Q ss_pred EEEecChhHHH
Q 045902 424 IVYQGPREYVL 434 (1472)
Q Consensus 424 iv~~G~~~~~~ 434 (1472)
+++.|+.+++.
T Consensus 210 i~~~g~~~~~~ 220 (354)
T TIGR02142 210 VAAAGPIAEVW 220 (354)
T ss_pred EEEECCHHHHh
Confidence 99999988764
No 330
>cd03292 ABC_FtsE_transporter FtsE is a hydrophilic nucleotide-binding protein that binds FtsX to form a heterodimeric ATP-binding cassette (ABC)-type transporter that associates with the bacterial inner membrane. The FtsE/X transporter is thought to be involved in cell division and is important for assembly or stability of the septal ring.
Probab=100.00 E-value=1.1e-33 Score=315.53 Aligned_cols=195 Identities=23% Similarity=0.375 Sum_probs=162.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++++ +|+|.++|+++....+ ++.++|++|++.++
T Consensus 14 ~~~l~~~sl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~v~q~~~~~ 90 (214)
T cd03292 14 TAALDGINISISAGEFVFLVGPSGAGKSTLLKLIYKEELPT---SGTIRVNGQDVSDLRGRAIPYLRRKIGVVFQDFRLL 90 (214)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcccCCHHHHHHHHHheEEEecCchhc
Confidence 36999999999999999999999999999999999999887 8999999998765421 35699999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||+||+.+.....+.. ..+ . ....+.+++.+||++..++.++
T Consensus 91 ~~~t~~~~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~- 135 (214)
T cd03292 91 PDRNVYENVAFALEVTGVP----------PRE----------I--------------RKRVPAALELVGLSHKHRALPA- 135 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHHcCCHHHhhCChh-
Confidence 9999999998864322110 000 0 0013457888899887776665
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.||||||||++||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|
T Consensus 136 ----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~-~~~tiiivtH~~-~~~~~~~d~i~~l 209 (214)
T cd03292 136 ----ELSGGEQQRVAIARAIVNSPTILIADEPTGNLDPDTTWEIMNLLKKINK-AGTTVVVATHAK-ELVDTTRHRVIAL 209 (214)
T ss_pred ----hcCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 4999999999999999999999999999999999999999999999865 478888887765 4677789999999
Q ss_pred cCCeE
Q 045902 420 SEGEI 424 (1472)
Q Consensus 420 ~~G~i 424 (1472)
++|++
T Consensus 210 ~~G~~ 214 (214)
T cd03292 210 ERGKL 214 (214)
T ss_pred eCCcC
Confidence 99974
No 331
>PRK11614 livF leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1.4e-33 Score=319.65 Aligned_cols=203 Identities=25% Similarity=0.424 Sum_probs=166.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 18 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (237)
T PRK11614 18 IQALHEVSLHINQGEIVTLIGANGAGKTTLLGTLCGDPRAT---SGRIVFDGKDITDWQTAKIMREAVAIVPEGRRVFSR 94 (237)
T ss_pred ceeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CceEEECCEecCCCCHHHHHHhCEEEeccCcccCCC
Confidence 36999999999999999999999999999999999999887 8999999998765432 3569999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHh-CCcccccccccCc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKIL-GLDICADIMVGNE 340 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l-gL~~~~dt~vg~~ 340 (1472)
+||+||+.++..... . + +. +. ..+.+++.+ ++.+..++.+
T Consensus 95 ~tv~~~l~~~~~~~~---~-~---~~---------------~~--------------~~~~~l~~~~~l~~~~~~~~--- 135 (237)
T PRK11614 95 MTVEENLAMGGFFAE---R-D---QF---------------QE--------------RIKWVYELFPRLHERRIQRA--- 135 (237)
T ss_pred CcHHHHHHHhhhccC---h-h---HH---------------HH--------------HHHHHHHHHHHHHHHHhCch---
Confidence 999999987532110 0 0 00 00 012344555 3554445444
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
..|||||||||+||++++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|+
T Consensus 136 --~~LS~G~~qrl~la~al~~~p~illlDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l~ 211 (237)
T PRK11614 136 --GTMSGGEQQMLAIGRALMSQPRLLLLDEPSLGLAPIIIQQIFDTIEQLRE-QGMTIFLVEQNA-NQALKLADRGYVLE 211 (237)
T ss_pred --hhCCHHHHHHHHHHHHHHhCCCEEEEcCccccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCcH-HHHHhhCCEEEEEe
Confidence 45999999999999999999999999999999999999999999999876 478988887664 47889999999999
Q ss_pred CCeEEEecChhHHH
Q 045902 421 EGEIVYQGPREYVL 434 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~ 434 (1472)
+|++++.|+.+++.
T Consensus 212 ~G~i~~~~~~~~~~ 225 (237)
T PRK11614 212 NGHVVLEDTGDALL 225 (237)
T ss_pred CCEEEeeCCHHHHh
Confidence 99999999988763
No 332
>TIGR01184 ntrCD nitrate transport ATP-binding subunits C and D. This model describes the ATP binding subunits of nitrate transport in bacteria and archaea. This protein belongs to the ATP-binding cassette (ABC) superfamily. It is thought that the two subunits encoded by ntrC and ntrD form the binding surface for interaction with ATP. This model is restricted in identifying ATP binding subunit associated with the nitrate transport. Nitrate assimilation is aided by other proteins derived from the operon which among others include products of ntrA - a regulatory protein; ntrB - a hydropbobic transmembrane permease and narB - a reductase.
Probab=100.00 E-value=1.5e-33 Score=317.68 Aligned_cols=202 Identities=28% Similarity=0.317 Sum_probs=166.4
Q ss_pred eeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHHHHH
Q 045902 189 LHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVRETL 268 (1472)
Q Consensus 189 L~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~E~l 268 (1472)
|+|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|+++..... ..+|++|++.+++.+||+||+
T Consensus 1 l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~--~~~~v~q~~~l~~~~tv~e~l 75 (230)
T TIGR01184 1 LKGVNLTIQQGEFISLIGHSGCGKSTLLNLISGLAQPT---SGGVILEGKQITEPGP--DRMVVFQNYSLLPWLTVRENI 75 (230)
T ss_pred CCceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCCCCh--hheEEecCcccCCCCCHHHHH
Confidence 57999999999999999999999999999999999887 8999999998865433 248999999999999999999
Q ss_pred HHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChH
Q 045902 269 DFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGG 348 (1472)
Q Consensus 269 ~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGG 348 (1472)
.+........ ....+ . ...++.+++.+||++..++.++. ||||
T Consensus 76 ~~~~~~~~~~--------~~~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~~-----LSgG 118 (230)
T TIGR01184 76 ALAVDRVLPD--------LSKSE----------R--------------RAIVEEHIALVGLTEAADKRPGQ-----LSGG 118 (230)
T ss_pred HHHHHhcccC--------CCHHH----------H--------------HHHHHHHHHHcCCHHHHcCChhh-----CCHH
Confidence 8753210000 00000 0 00134578889998877776654 9999
Q ss_pred HHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEec
Q 045902 349 QKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQG 428 (1472)
Q Consensus 349 qrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G 428 (1472)
|||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++.+++|++++|++|+++..|
T Consensus 119 ~~qrv~la~al~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~~~~~tii~~sH~~~-~~~~~~d~v~~l~~G~i~~~~ 197 (230)
T TIGR01184 119 MKQRVAIARALSIRPKVLLLDEPFGALDALTRGNLQEELMQIWEEHRVTVLMVTHDVD-EALLLSDRVVMLTNGPAANIG 197 (230)
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCCcEeccc
Confidence 9999999999999999999999999999999999999999987756789888887654 678899999999999999988
Q ss_pred ChhHH
Q 045902 429 PREYV 433 (1472)
Q Consensus 429 ~~~~~ 433 (1472)
+..++
T Consensus 198 ~~~~~ 202 (230)
T TIGR01184 198 QILEV 202 (230)
T ss_pred Cceec
Confidence 65443
No 333
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=1.8e-33 Score=360.13 Aligned_cols=206 Identities=21% Similarity=0.295 Sum_probs=172.1
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 263 (1472)
++|+|+|++++|||.++|+|+||||||||+++|+|+++|+ +|+|.+||+++++..+ ++.++||+|++.+|+. |
T Consensus 355 ~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~l~~~i~~v~Q~~~lF~~-T 430 (592)
T PRK10790 355 LVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPLT---EGEIRLDGRPLSSLSHSVLRQGVAMVQQDPVVLAD-T 430 (592)
T ss_pred ceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCC---CceEEECCEEhhhCCHHHHHhheEEEccCCccccc-h
Confidence 5999999999999999999999999999999999999998 8999999999987654 4789999999999875 9
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
++|||.++.. . +++++.++.+.+. .+..++. |++..||.+|+ .+.
T Consensus 431 i~~NI~~~~~---~--------------------~d~~i~~a~~~~g---------l~~~i~~--lp~Gldt~i~e-~g~ 475 (592)
T PRK10790 431 FLANVTLGRD---I--------------------SEEQVWQALETVQ---------LAELARS--LPDGLYTPLGE-QGN 475 (592)
T ss_pred HHHHHHhCCC---C--------------------CHHHHHHHHHHcC---------cHHHHHh--ccccccccccC-CCC
Confidence 9999988521 0 1112222222221 1222332 45667999985 667
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
.||||||||++|||||+.+|++++||||||+||+.++..|.+.|+++.. ++|+|+..|++ +....+|+|++|++|+
T Consensus 476 ~LSGGqrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~--~~tvIivtHr~--~~l~~~D~ii~l~~G~ 551 (592)
T PRK10790 476 NLSVGQKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE--HTTLVVIAHRL--STIVEADTILVLHRGQ 551 (592)
T ss_pred CCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecch--HHHHhCCEEEEEECCE
Confidence 7999999999999999999999999999999999999999999998753 68999888887 5667899999999999
Q ss_pred EEEecChhHHHH
Q 045902 424 IVYQGPREYVLD 435 (1472)
Q Consensus 424 iv~~G~~~~~~~ 435 (1472)
++..|+++++.+
T Consensus 552 i~~~G~~~~L~~ 563 (592)
T PRK10790 552 AVEQGTHQQLLA 563 (592)
T ss_pred EEEEcCHHHHHh
Confidence 999999999863
No 334
>PRK11174 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7e-34 Score=363.92 Aligned_cols=209 Identities=24% Similarity=0.406 Sum_probs=174.6
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++... +++++|+|+|++|+||+++||+||||||||||+++|+|.. + .+|+|.+||.++
T Consensus 349 ~i~~~~vsf~~~------------~~~~vL~~i~l~i~~G~~vaIvG~SGsGKSTL~~lL~g~~-p--~~G~I~i~g~~i 413 (588)
T PRK11174 349 TIEAEDLEILSP------------DGKTLAGPLNFTLPAGQRIALVGPSGAGKTSLLNALLGFL-P--YQGSLKINGIEL 413 (588)
T ss_pred eEEEEeeEEecc------------CCCeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCC-C--CCcEEEECCEec
Confidence 588999976431 2346999999999999999999999999999999999987 4 389999999886
Q ss_pred C---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccc-------cccccCCCCCCCCCHH
Q 045902 957 K---QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKAL-------RNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 957 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~-------~~~~~~~~~~~~LSgG 1026 (1472)
. .+.+++.++||+|++.++.. |++||+.++. ....++.++++++..++.+. .|+.+|..| .+||||
T Consensus 414 ~~~~~~~lr~~i~~v~Q~~~LF~~-TI~eNI~~g~--~~~~~eei~~al~~a~l~~~i~~lp~G~dT~vge~G-~~LSGG 489 (588)
T PRK11174 414 RELDPESWRKHLSWVGQNPQLPHG-TLRDNVLLGN--PDASDEQLQQALENAWVSEFLPLLPQGLDTPIGDQA-AGLSVG 489 (588)
T ss_pred ccCCHHHHHhheEEecCCCcCCCc-CHHHHhhcCC--CCCCHHHHHHHHHHhCHHHHHHhcccccccccccCC-CCCCHH
Confidence 4 35678889999999988864 9999998852 11234566677777666543 245566543 579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||++|||||+++|+||+||||||+||+.+++.|++.|+++. +++|+|+++|+++ ..+.+|++++|++ |+++..|
T Consensus 490 QrQRialARAll~~~~IliLDE~TSaLD~~te~~i~~~l~~~~-~~~TvIiItHrl~--~i~~aD~Iivl~~-G~i~e~G 565 (588)
T PRK11174 490 QAQRLALARALLQPCQLLLLDEPTASLDAHSEQLVMQALNAAS-RRQTTLMVTHQLE--DLAQWDQIWVMQD-GQIVQQG 565 (588)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh-CCCEEEEEecChH--HHHhCCEEEEEeC-CeEeecC
Confidence 9999999999999999999999999999999999999999885 5799999999974 5678999999985 7899988
Q ss_pred CC
Q 045902 1107 PL 1108 (1472)
Q Consensus 1107 ~~ 1108 (1472)
+.
T Consensus 566 ~~ 567 (588)
T PRK11174 566 DY 567 (588)
T ss_pred CH
Confidence 74
No 335
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=2.5e-33 Score=320.88 Aligned_cols=211 Identities=22% Similarity=0.292 Sum_probs=170.3
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC--eeEEEEEEcCc
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG--YIEGSISISGY 954 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~--~~~G~i~i~G~ 954 (1472)
.+.++|+++.+ ++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 ~l~~~~l~~~~--------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~ 69 (254)
T PRK10418 4 QIELRNIALQA--------------AQPLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGK 69 (254)
T ss_pred EEEEeCeEEEe--------------ccceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCe
Confidence 56778877653 135899999999999999999999999999999999987641 15899999998
Q ss_pred cCChhcc-cceeEEeccCCC--CCCCCCHHHHHHHHHHc-CCC-chHHHHHHHHHcccccc---cccccCCCCCCCCCHH
Q 045902 955 PKKQETF-ARISGYCEQNDI--HSPNVTIYESLLYSAWL-RLP-KDMFVEEVMELVEMKAL---RNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 955 ~~~~~~~-~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l-~~~-~~~~~~~v~~~l~l~~~---~~~~~~~~~~~~LSgG 1026 (1472)
++..... ++.++|++|++. +.+..|+.+++.+.+.. ... .+..++++++.+++.+. .+.. +..||||
T Consensus 70 ~i~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G 144 (254)
T PRK10418 70 PVAPCALRGRKIATIMQNPRSAFNPLHTMHTHARETCLALGKPADDATLTAALEAVGLENAARVLKLY-----PFEMSGG 144 (254)
T ss_pred eccccccccceEEEEecCCccccCccccHHHHHHHHHHHcCCChHHHHHHHHHHHcCCCChhhhhhcC-----CcccCHH
Confidence 8643222 356899999974 44668999988664332 222 22456778888887652 2332 3579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
||||++|||||+.+|++|+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.+|++++|.+ |+++..
T Consensus 145 q~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l~~-G~i~~~ 222 (254)
T PRK10418 145 MLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVMSH-GRIVEQ 222 (254)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999764 899999999976 46678999999985 789988
Q ss_pred cCC
Q 045902 1106 GPL 1108 (1472)
Q Consensus 1106 g~~ 1108 (1472)
|+.
T Consensus 223 ~~~ 225 (254)
T PRK10418 223 GDV 225 (254)
T ss_pred cCH
Confidence 875
No 336
>PRK13548 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=2.1e-33 Score=321.94 Aligned_cols=206 Identities=32% Similarity=0.469 Sum_probs=170.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|++.+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (258)
T PRK13548 15 RTLLDDVSLTLRPGEVVAILGPNGAGKSTLLRALSGELSPD---SGEVRLNGRPLADWSPAELARRRAVLPQHSSLSFPF 91 (258)
T ss_pred eeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCEEcccCCHHHhhhheEEEccCCcCCCCC
Confidence 35999999999999999999999999999999999999887 8999999998765432 35699999998888889
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||+||+.+........ .. +. ....+.+++.+||++..|+.+++
T Consensus 92 tv~e~l~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~~--- 134 (258)
T PRK13548 92 TVEEVVAMGRAPHGLS----------RA----------ED--------------DALVAAALAQVDLAHLAGRDYPQ--- 134 (258)
T ss_pred CHHHHHHhhhcccCCC----------cH----------HH--------------HHHHHHHHHHcCCHhHhcCCccc---
Confidence 9999998753211100 00 00 00134578889998777776654
Q ss_pred CCCChHHHHHHHHHHHHh------CCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 343 RGISGGQKKRVTTGEMLV------GPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~------~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
|||||||||+||+||+ .+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|+|
T Consensus 135 --LSgGe~qrv~la~al~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i 211 (258)
T PRK13548 135 --LSGGEQQRVQLARVLAQLWEPDGPPRWLLLDEPTSALDLAHQHHVLRLARQLAHERGLAVIVVLHDL-NLAARYADRI 211 (258)
T ss_pred --CCHHHHHHHHHHHHHhcccccCCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCH-HHHHHhcCEE
Confidence 9999999999999999 599999999999999999999999999998744678888887765 4677899999
Q ss_pred EEecCCeEEEecChhHHH
Q 045902 417 ILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~~ 434 (1472)
++|++|++++.|+.+++.
T Consensus 212 ~~l~~G~i~~~~~~~~~~ 229 (258)
T PRK13548 212 VLLHQGRLVADGTPAEVL 229 (258)
T ss_pred EEEECCEEEeeCCHHHHh
Confidence 999999999999987764
No 337
>PRK14273 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=318.51 Aligned_cols=206 Identities=21% Similarity=0.308 Sum_probs=162.7
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCeeCCCC-----CCCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSL--RVSGRVTYCGHELTEF-----VPQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 259 (1472)
.+|+|+|+.+++||+++|+|||||||||||++|+|.++++. ..+|+|.++|+++... ..++.++|++|++..+
T Consensus 21 ~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 100 (254)
T PRK14273 21 KALNNINIKILKNSITALIGPSGCGKSTFLRTLNRMNDLVEGIKIEGNVIYEGKNIYSNNFDILELRRKIGMVFQTPNPF 100 (254)
T ss_pred eeecceeeEEcCCCEEEEECCCCCCHHHHHHHHhccccCCcCCCCceEEEECCEecccccccHHHHhhceEEEeeccccc
Confidence 58999999999999999999999999999999999987621 1379999999987421 1245799999998887
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCC----cccccc
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGL----DICADI 335 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL----~~~~dt 335 (1472)
+ +||+||+.|.....+.... .+.+ ..++..++.+|+ ++..|+
T Consensus 101 ~-~tv~eni~~~~~~~~~~~~-------------------~~~~--------------~~~~~~l~~~~l~~~l~~~~~~ 146 (254)
T PRK14273 101 L-MSIYDNISYGPKIHGTKDK-------------------KKLD--------------EIVEQSLKKSALWNEVKDKLNT 146 (254)
T ss_pred c-CcHHHHHHHHHHhcCCCCH-------------------HHHH--------------HHHHHHHHHhCCchhhHHHHhC
Confidence 4 8999999886432211000 0000 012345566665 233455
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
.+ +.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++. ++.+++|+
T Consensus 147 ~~-----~~LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tvii~sH~~~-~~~~~~d~ 218 (254)
T PRK14273 147 NA-----LSLSGGQQQRLCIARTLAIEPNVILMDEPTSALDPISTGKIEELIINLKE--SYTIIIVTHNMQ-QAGRISDR 218 (254)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhc--CCEEEEEeCCHH-HHHHhCCE
Confidence 44 45999999999999999999999999999999999999999999999853 578888777654 67789999
Q ss_pred EEEecCCeEEEecChhHHH
Q 045902 416 IILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~ 434 (1472)
+++|++|+++.+|+.+++.
T Consensus 219 i~~l~~G~i~~~g~~~~~~ 237 (254)
T PRK14273 219 TAFFLNGCIEEESSTDELF 237 (254)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 338
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=320.81 Aligned_cols=213 Identities=24% Similarity=0.307 Sum_probs=169.6
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G 953 (1472)
-+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g 70 (251)
T PRK14270 4 KMESKNLNLWY-------------GEKQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDG 70 (251)
T ss_pred EEEEEEeEEEE-------------CCeeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECC
Confidence 35677776554 2346999999999999999999999999999999999976531 2589999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cch---HHHHHHHHHccccc-ccccccCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMKA-LRNSLVGLPGVDG 1022 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~~-~~~~~~~~~~~~~ 1022 (1472)
.++.. ...++.++|++|++.+++ .|++||+.|...... ... ..++++++.+++.. +.+.. . .....
T Consensus 71 ~~i~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~-~~~~~ 147 (251)
T PRK14270 71 KNIYDKDVDVVELRKRVGMVFQKPNPFP-MSIYDNVAYGPRIHGIKDKKELDKIVEWALKKAALWDEVKDDL-K-KSALK 147 (251)
T ss_pred EecccccccHHHHHhheEEEecCCCcCC-CcHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHcCCchhhhhHh-h-CCccc
Confidence 87632 234567899999998887 899999987654321 111 23556777777642 11211 1 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||+|||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|++ |++
T Consensus 148 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~d~v~~l~~-G~i 224 (251)
T PRK14270 148 LSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK-EYTIVIVTHNMQ-QASRVSDYTAFFLM-GDL 224 (251)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEEcCHH-HHHHhcCEEEEEEC-CeE
Confidence 999999999999999999999999999999999999999999999976 689999999976 56788999999985 789
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
++.|+.
T Consensus 225 ~~~~~~ 230 (251)
T PRK14270 225 IEFNKT 230 (251)
T ss_pred EEeCCH
Confidence 888875
No 339
>PRK13538 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=1.3e-33 Score=312.61 Aligned_cols=185 Identities=22% Similarity=0.298 Sum_probs=155.8
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCCH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
+.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|+
T Consensus 14 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~--p~~G~v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~tv 91 (204)
T PRK13538 14 RILFSGLSFTLNAGELVQIEGPNGAGKTSLLRILAGLAR--PDAGEVLWQGEPIRRQRDEYHQDLLYLGHQPGIKTELTA 91 (204)
T ss_pred EEEEecceEEECCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEEcccchHHhhhheEEeCCccccCcCCcH
Confidence 469999999999999999999999999999999999877 458999999987532 2345678999999988899999
Q ss_pred HHHHHHHHHcCC-CchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 045902 981 YESLLYSAWLRL-PKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1059 (1472)
Q Consensus 981 ~e~l~~~~~l~~-~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~ 1059 (1472)
.|++.+...... ..+..++++++.+++.+..++.. ..||||||||++||+||+++|++|+|||||+|||+.++.
T Consensus 92 ~e~l~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~ 166 (204)
T PRK13538 92 LENLRFYQRLHGPGDDEALWEALAQVGLAGFEDVPV-----RQLSAGQQRRVALARLWLTRAPLWILDEPFTAIDKQGVA 166 (204)
T ss_pred HHHHHHHHHhcCccHHHHHHHHHHHcCCHHHhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHH
Confidence 999987654432 22356778899999877666543 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCEEEEEecCccHHHHHhhC-eEEEE
Q 045902 1060 IVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD-ELFLM 1096 (1472)
Q Consensus 1060 ~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D-~v~~l 1096 (1472)
.+++.|++++++|+|||++||+++ ....|+ |++.+
T Consensus 167 ~l~~~l~~~~~~~~tiii~sh~~~--~i~~~~~~~~~~ 202 (204)
T PRK13538 167 RLEALLAQHAEQGGMVILTTHQDL--PVASDKVRKLRL 202 (204)
T ss_pred HHHHHHHHHHHCCCEEEEEecChh--hhccCCceEEec
Confidence 999999999877899999999975 343454 44443
No 340
>PRK14250 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-33 Score=317.88 Aligned_cols=200 Identities=23% Similarity=0.367 Sum_probs=166.5
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 263 (1472)
.+|+|+|+.+++|++++|+||||||||||+++|+|.++|+ +|+|.++|.++....+ ++.++|++|++.+++ .|
T Consensus 17 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (241)
T PRK14250 17 EILKDISVKFEGGAIYTIVGPSGAGKSTLIKLINRLIDPT---EGSILIDGVDIKTIDVIDLRRKIGMVFQQPHLFE-GT 92 (241)
T ss_pred eeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEEhhhcChHHhhhcEEEEecCchhch-hh
Confidence 5899999999999999999999999999999999999887 8999999998764322 357999999988776 69
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-ccccccccCccC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADIMVGNEMR 342 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~~~~ 342 (1472)
|+||+.+.....+ . .. ..++.+++.+||+ +..++.+
T Consensus 93 v~e~l~~~~~~~~--~---------~~---------------------------~~~~~~l~~~~l~~~~~~~~~----- 129 (241)
T PRK14250 93 VKDNIEYGPMLKG--E---------KN---------------------------VDVEYYLSIVGLNKEYATRDV----- 129 (241)
T ss_pred HHHHHhcchhhcC--c---------HH---------------------------HHHHHHHHHcCCCHHHhhCCc-----
Confidence 9999976432110 0 00 0124467888886 4555544
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
..|||||||||+||+|++.+|++++|||||+|||..++..+.+.|+++++..+.|+|++.|++. ++.+++|+|++|++|
T Consensus 130 ~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tii~~sH~~~-~~~~~~d~i~~l~~G 208 (241)
T PRK14250 130 KNLSGGEAQRVSIARTLANNPEVLLLDEPTSALDPTSTEIIEELIVKLKNKMNLTVIWITHNME-QAKRIGDYTAFLNKG 208 (241)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhCCCEEEEEeccHH-HHHHhCCEEEEEeCC
Confidence 4599999999999999999999999999999999999999999999987655788888877654 677899999999999
Q ss_pred eEEEecChhHHH
Q 045902 423 EIVYQGPREYVL 434 (1472)
Q Consensus 423 ~iv~~G~~~~~~ 434 (1472)
+++..|+.+++.
T Consensus 209 ~i~~~~~~~~~~ 220 (241)
T PRK14250 209 ILVEYAKTYDFF 220 (241)
T ss_pred EEEEeCCHHHHh
Confidence 999999987763
No 341
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=313.91 Aligned_cols=215 Identities=23% Similarity=0.309 Sum_probs=174.4
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-C-CCCceeEEEEcCeeCCCCCC-------CceEEEEcCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD-K-SLRVSGRVTYCGHELTEFVP-------QRTCAYISQH 255 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~-~-~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~ 255 (1472)
..++++|||+.+++||+++|+|.|||||||+.++|.|+++ + ...++|+|.++|.++-.+.. .+.++||+|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 4679999999999999999999999999999999999997 4 33467999999998765543 2579999999
Q ss_pred C--CCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccc
Q 045902 256 D--LHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICA 333 (1472)
Q Consensus 256 d--~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 333 (1472)
+ .+.|.+||.+.+.-..+...... ++.|. ...+..+|+..||++-.
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~--------~~~ea------------------------~~~a~~~L~~Vgi~~~~ 144 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGL--------SKKEA------------------------KERAIELLELVGIPDPE 144 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcch--------hhHHH------------------------HHHHHHHHHHcCCCCHH
Confidence 6 77899999998865544211100 00000 01134578888888532
Q ss_pred cccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhcc
Q 045902 334 DIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLF 413 (1472)
Q Consensus 334 dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~f 413 (1472)
. +-+.++..|||||||||.||.||+.+|++|+.|||||+||..++.+|++.|+++.++.+.++|+..| ...-+.+++
T Consensus 145 ~--~~~~YPhelSGGMrQRV~IAmala~~P~LlIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITH-Dl~vva~~a 221 (316)
T COG0444 145 R--RLKSYPHELSGGMRQRVMIAMALALNPKLLIADEPTTALDVTVQAQILDLLKELQREKGTALILITH-DLGVVAEIA 221 (316)
T ss_pred H--HHhhCCcccCCcHHHHHHHHHHHhCCCCEEEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeC-CHHHHHHhc
Confidence 1 2246777899999999999999999999999999999999999999999999999877888777655 566788999
Q ss_pred CeEEEecCCeEEEecChhHHH
Q 045902 414 DDIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 414 D~iilL~~G~iv~~G~~~~~~ 434 (1472)
|||+||+.|+||+.|+.+++.
T Consensus 222 Dri~VMYaG~iVE~g~~~~i~ 242 (316)
T COG0444 222 DRVAVMYAGRIVEEGPVEEIF 242 (316)
T ss_pred ceEEEEECcEEEEeCCHHHHh
Confidence 999999999999999998874
No 342
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=1.2e-33 Score=318.70 Aligned_cols=197 Identities=25% Similarity=0.329 Sum_probs=161.9
Q ss_pred eeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC--eeEEEEEEcCccCChhcc-cceeEEeccCCC--CCCCCC
Q 045902 905 LLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG--YIEGSISISGYPKKQETF-ARISGYCEQNDI--HSPNVT 979 (1472)
Q Consensus 905 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~--~~~G~i~i~G~~~~~~~~-~~~~gyv~Q~~~--~~~~lT 979 (1472)
+|+|+|+++++|++++|+||||||||||+++|+|..++. +.+|+|.++|.++..... ++.++|++|++. +.+.+|
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~~~t 80 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQTSGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNPLFT 80 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCccccEEEECCEechhhhhhhheeEEEecCchhhcCcccC
Confidence 579999999999999999999999999999999987631 158999999988654322 357899999984 557789
Q ss_pred HHHHHHHHHHcC-CCch---HHHHHHHHHccccc---ccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCC
Q 045902 980 IYESLLYSAWLR-LPKD---MFVEEVMELVEMKA---LRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSG 1052 (1472)
Q Consensus 980 v~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~---~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsg 1052 (1472)
+.|++.+..... .... ..++++++.+++.+ ..+.. +..|||||||||+||++|+.+|+||+|||||+|
T Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~~~LS~G~~qrv~laral~~~p~vllLDEPt~~ 155 (230)
T TIGR02770 81 MGNHAIETLRSLGKLSKQARALILEALEAVGLPDPEEVLKKY-----PFQLSGGMLQRVMIALALLLEPPFLIADEPTTD 155 (230)
T ss_pred HHHHHHHHHHHcCccHHHHHHHHHHHHHHcCCCchHHHHhCC-----hhhcCHHHHHHHHHHHHHhcCCCEEEEcCCccc
Confidence 999987654322 1111 34667788888763 33333 347999999999999999999999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1053 LDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+.++..+.+.|++++++ |+|||+++|+++ ++...+|++++|++ |+++..|+.
T Consensus 156 LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 210 (230)
T TIGR02770 156 LDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVAVMDD-GRIVERGTV 210 (230)
T ss_pred cCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999999764 899999999976 56678999999985 788888874
No 343
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=7.3e-34 Score=311.75 Aligned_cols=221 Identities=24% Similarity=0.325 Sum_probs=190.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~~ 258 (1472)
..-++|+|+.++.||+..|||-||||||||+++|.++.+|+ +|+|.++|.++..... ++.+++|+|+..+
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLiept---~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaL 117 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPT---RGEILVDGKDIAKLSAAELRELRRKKISMVFQSFAL 117 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCCCC---CceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhcc
Confidence 34589999999999999999999999999999999999998 9999999999877653 3679999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
+|..||.||..|+.+.+|..... +++ ...+.|+..||+..++.++.
T Consensus 118 lPhrtVl~Nv~fGLev~Gv~~~e-------r~~---------------------------~a~~~l~~VgL~~~~~~yp~ 163 (386)
T COG4175 118 LPHRTVLENVAFGLEVQGVPKAE-------REE---------------------------RALEALELVGLEGYADKYPN 163 (386)
T ss_pred ccchhHhhhhhcceeecCCCHHH-------HHH---------------------------HHHHHHHHcCchhhhhcCcc
Confidence 99999999999999988864211 111 13457889999998886664
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
.||||+||||.+||||..+|+||+||||+|+|||--+.++.+.|.++.+..++|+|... |...|..++.|||.+
T Consensus 164 -----eLSGGMqQRVGLARAla~~~~IlLMDEaFSALDPLIR~~mQdeLl~Lq~~l~KTIvFit-HDLdEAlriG~rIai 237 (386)
T COG4175 164 -----ELSGGMQQRVGLARALANDPDILLMDEAFSALDPLIRTEMQDELLELQAKLKKTIVFIT-HDLDEALRIGDRIAI 237 (386)
T ss_pred -----cccchHHHHHHHHHHHccCCCEEEecCchhhcChHHHHHHHHHHHHHHHHhCCeEEEEe-cCHHHHHhccceEEE
Confidence 59999999999999999999999999999999999999999999999888889988865 567899999999999
Q ss_pred ecCCeEEEecChhHHHHHHHhcCCCCCCCCChHHHHHHh
Q 045902 419 LSEGEIVYQGPREYVLDFFESVGFRCPERKGAADFLQEV 457 (1472)
Q Consensus 419 L~~G~iv~~G~~~~~~~~F~~~G~~cp~~~~~adfl~ev 457 (1472)
|.+|+||..|+++|++. .|...-++||..++
T Consensus 238 mkdG~ivQ~Gtp~eIl~--------~PAndYV~~Fv~~v 268 (386)
T COG4175 238 MKDGEIVQVGTPEEILL--------NPANDYVRDFVRNV 268 (386)
T ss_pred ecCCeEEEeCCHHHHHc--------CccHHHHHHHHhcC
Confidence 99999999999999974 34444455666543
No 344
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-33 Score=321.69 Aligned_cols=213 Identities=22% Similarity=0.310 Sum_probs=169.9
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--C-eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~G 953 (1472)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|..++ . +.+|+|.++|
T Consensus 12 ~l~i~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g 78 (259)
T PRK14274 12 VYQINGMNLWYG-------------QHHALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNG 78 (259)
T ss_pred eEEEeeEEEEEC-------------CeeeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECC
Confidence 467888876542 24699999999999999999999999999999999997642 1 1489999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cch---HHHHHHHHHcccccc-cccccCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMKAL-RNSLVGLPGVDG 1022 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~~~-~~~~~~~~~~~~ 1022 (1472)
.++.. ...++.+||++|++.+++. |++||+.+...... ..+ ..++++++.+++.+. .+.+ . .....
T Consensus 79 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l-~-~~~~~ 155 (259)
T PRK14274 79 SNILKGKVDLVELRKNIGMVFQKGNPFPQ-SIFDNVAYGPRIHGTKNKKKLQEIVEKSLKDVALWDEVKDRL-H-TQALS 155 (259)
T ss_pred EEccccccCHHHHhhceEEEecCCccccc-CHHHHHHhHHHhcCCCCHHHHHHHHHHHHHHcCCchhhhhhh-h-CCccc
Confidence 87631 2345679999999888875 99999987654332 112 234566777776432 1111 1 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||||||||++||++|+.+|++|+|||||+|||+.++..+++.|+++.+ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 156 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~i 232 (259)
T PRK14274 156 LSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE-KYTIVIVTHNMQ-QAARVSDQTAFFYM-GEL 232 (259)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999965 799999999976 47788999999985 789
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
+..|+.
T Consensus 233 ~~~g~~ 238 (259)
T PRK14274 233 VECNDT 238 (259)
T ss_pred EEECCH
Confidence 988875
No 345
>TIGR02673 FtsE cell division ATP-binding protein FtsE. This model describes FtsE, a member of the ABC transporter ATP-binding protein family. This protein, and its permease partner FtsX, localize to the division site. In a number of species, the ftsEX gene pair is located next to FtsY, the signal recognition particle-docking protein.
Probab=100.00 E-value=1.5e-33 Score=314.66 Aligned_cols=194 Identities=27% Similarity=0.398 Sum_probs=162.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+.+|+|+|+.+++|++++|+||||||||||+++|+|.++++ +|+|.++|+++..... ++.++|++|++.++
T Consensus 15 ~~il~~is~~i~~G~~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (214)
T TIGR02673 15 VAALHDVSLHIRKGEFLFLTGPSGAGKTTLLKLLYGALTPS---RGQVRIAGEDVNRLRGRQLPLLRRRIGVVFQDFRLL 91 (214)
T ss_pred ceeecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcccCCHHHHHHHHhheEEEecChhhc
Confidence 36999999999999999999999999999999999999887 8999999998865431 35799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||+||+.+.....+.. .. +. ....+.+++.+||++..++.+.
T Consensus 92 ~~~tv~~~l~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~- 136 (214)
T TIGR02673 92 PDRTVYENVALPLEVRGKK----------ER----------EI--------------QRRVGAALRQVGLEHKADAFPE- 136 (214)
T ss_pred cCCcHHHHHHHHHHHcCCC----------HH----------HH--------------HHHHHHHHHHcCChhhhhCChh-
Confidence 9999999998864322110 00 00 0013557888899876676665
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ .++|++++.|++ .++.+++|++++|
T Consensus 137 ----~LS~G~~qrl~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~tH~~-~~~~~~~d~i~~l 210 (214)
T TIGR02673 137 ----QLSGGEQQRVAIARAIVNSPPLLLADEPTGNLDPDLSERILDLLKRLNK-RGTTVIVATHDL-SLVDRVAHRVIIL 210 (214)
T ss_pred ----hCCHHHHHHHHHHHHHhCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhcCEEEEe
Confidence 4999999999999999999999999999999999999999999999865 478888888765 4777899999999
Q ss_pred cCCe
Q 045902 420 SEGE 423 (1472)
Q Consensus 420 ~~G~ 423 (1472)
++|+
T Consensus 211 ~~G~ 214 (214)
T TIGR02673 211 DDGR 214 (214)
T ss_pred cCCC
Confidence 9985
No 346
>PRK11300 livG leucine/isoleucine/valine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-33 Score=320.56 Aligned_cols=221 Identities=22% Similarity=0.295 Sum_probs=172.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+++|+|+|+.+++|++++|+||||||||||+++|+|.++++ +|+|.++|.++....+ +..++|++|++.+++.
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 94 (255)
T PRK11300 18 LLAVNNVNLEVREQEIVSLIGPNGAGKTTVFNCLTGFYKPT---GGTILLRGQHIEGLPGHQIARMGVVRTFQHVRLFRE 94 (255)
T ss_pred EEEEEeeeeEEcCCeEEEEECCCCCCHHHHHHHHhCCcCCC---cceEEECCEECCCCCHHHHHhcCeEEeccCcccCCC
Confidence 36999999999999999999999999999999999999887 8999999998765432 2358999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.++....... +........ ....+. + +. ....++.+++.+||++..++.+++
T Consensus 95 ~tv~enl~~~~~~~~~~---~~~~~~~~~---~~~~~~-~-~~-----------~~~~~~~~l~~~gl~~~~~~~~~~-- 153 (255)
T PRK11300 95 MTVIENLLVAQHQQLKT---GLFSGLLKT---PAFRRA-E-SE-----------ALDRAATWLERVGLLEHANRQAGN-- 153 (255)
T ss_pred CcHHHHHHHhhhccccc---hhhhhhccc---cccccc-h-hH-----------HHHHHHHHHHhCChhhhhhCChhh--
Confidence 99999998854311000 000000000 000000 0 00 001235578889998777766654
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++
T Consensus 154 ---LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~~~~tii~~sH~~-~~~~~~~d~i~~l~~ 229 (255)
T PRK11300 154 ---LAYGQQRRLEIARCMVTQPEILMLDEPAAGLNPKETKELDELIAELRNEHNVTVLLIEHDM-KLVMGISDRIYVVNQ 229 (255)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEEcCCccCCCHHHHHHHHHHHHHHHhhcCCEEEEEeCCH-HHHHHhCCEEEEEEC
Confidence 9999999999999999999999999999999999999999999998765578888887765 477789999999999
Q ss_pred CeEEEecChhHHH
Q 045902 422 GEIVYQGPREYVL 434 (1472)
Q Consensus 422 G~iv~~G~~~~~~ 434 (1472)
|++++.|+.+++.
T Consensus 230 g~i~~~~~~~~~~ 242 (255)
T PRK11300 230 GTPLANGTPEEIR 242 (255)
T ss_pred CeEEecCCHHHHh
Confidence 9999999987753
No 347
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.6e-33 Score=366.63 Aligned_cols=208 Identities=25% Similarity=0.423 Sum_probs=172.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|++++|||.++|+||||||||||+|+|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 478 ~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p~---~G~I~idg~~l~~~~~~~lr~~i~~v~Q~~~lf~-~ 553 (694)
T TIGR03375 478 TPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQPT---EGSVLLDGVDIRQIDPADLRRNIGYVPQDPRLFY-G 553 (694)
T ss_pred ccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhccEEECCChhhhh-h
Confidence 45899999999999999999999999999999999999998 8999999999987754 478999999998886 5
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++|||.++... . +++++.+..+.+.+ +..++ .|++..||.+| +.+
T Consensus 554 TI~eNi~~~~~~---~-------------------~~~~i~~a~~~~~l---------~~~i~--~lp~gl~T~i~-e~G 599 (694)
T TIGR03375 554 TLRDNIALGAPY---A-------------------DDEEILRAAELAGV---------TEFVR--RHPDGLDMQIG-ERG 599 (694)
T ss_pred hHHHHHhCCCCC---C-------------------CHHHHHHHHHHcCh---------HHHHH--hCcccccceec-CCC
Confidence 999999875210 0 11122222222111 11222 35667899998 467
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
..||||||||++||||++.+|++++||||||+||+.++..|.+.|+++. .++|+|++.|++ ++.+.+|+|++|++|
T Consensus 600 ~~LSgGQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~--~~~T~iiItHrl--~~~~~~D~iivl~~G 675 (694)
T TIGR03375 600 RSLSGGQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL--AGKTLVLVTHRT--SLLDLVDRIIVMDNG 675 (694)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh--CCCEEEEEecCH--HHHHhCCEEEEEeCC
Confidence 8899999999999999999999999999999999999999999999875 368998888877 466899999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
+++++|+++++++
T Consensus 676 ~i~e~G~~~eLl~ 688 (694)
T TIGR03375 676 RIVADGPKDQVLE 688 (694)
T ss_pred EEEeeCCHHHHHH
Confidence 9999999999865
No 348
>cd03264 ABC_drug_resistance_like ABC-type multidrug transport system, ATPase component. The biological function of this family is not well characterized, but display ABC domains similar to members of ABCA subfamily. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.2e-33 Score=314.72 Aligned_cols=196 Identities=30% Similarity=0.466 Sum_probs=163.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--CCceEEEEcCCCCCCCCCCH
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--PQRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--~~~~~~yv~Q~d~~~~~lTV 264 (1472)
++|+|+|+.+++| +++|+|||||||||||++|+|.++++ +|+|.++|.++.... .++.++|++|++.+++.+||
T Consensus 14 ~~l~~vs~~i~~g-~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 89 (211)
T cd03264 14 RALDGVSLTLGPG-MYGLLGPNGAGKTTLMRILATLTPPS---SGTIRIDGQDVLKQPQKLRRRIGYLPQEFGVYPNFTV 89 (211)
T ss_pred EEEcceeEEEcCC-cEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCCccccchHHHHhheEEecCCCcccccCCH
Confidence 6999999999999 99999999999999999999999887 899999998875432 13579999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.+.....+.. + .+. ...++.+++.+||++..|+.+++
T Consensus 90 ~~~l~~~~~~~~~~----------~----------~~~--------------~~~~~~~l~~~~l~~~~~~~~~~----- 130 (211)
T cd03264 90 REFLDYIAWLKGIP----------S----------KEV--------------KARVDEVLELVNLGDRAKKKIGS----- 130 (211)
T ss_pred HHHHHHHHHHhCCC----------H----------HHH--------------HHHHHHHHHHCCCHHHHhCchhh-----
Confidence 99998754322110 0 000 00135578889998777776654
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
|||||||||+||+||+.+|++++|||||+|||+.++.++.+.|+++++ +.|+|++.|++ .++.+++|++++|++|++
T Consensus 131 LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~vsH~~-~~~~~~~d~i~~l~~g~i 207 (211)
T cd03264 131 LSGGMRRRVGIAQALVGDPSILIVDEPTAGLDPEERIRFRNLLSELGE--DRIVILSTHIV-EDVESLCNQVAVLNKGKL 207 (211)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEcCCH-HHHHHhCCEEEEEECCEE
Confidence 999999999999999999999999999999999999999999999875 47877777655 467789999999999999
Q ss_pred EEec
Q 045902 425 VYQG 428 (1472)
Q Consensus 425 v~~G 428 (1472)
++.|
T Consensus 208 ~~~g 211 (211)
T cd03264 208 VFEG 211 (211)
T ss_pred EecC
Confidence 8765
No 349
>TIGR02770 nickel_nikD nickel import ATP-binding protein NikD. This family represents the NikD subunit of a multisubunit nickel import ABC transporter complex. Nickel, once imported, may be used in urease and in certain classes of hydrogenase and superoxide dismutase. NikD and NikE are homologous.
Probab=100.00 E-value=2.4e-33 Score=316.20 Aligned_cols=204 Identities=22% Similarity=0.260 Sum_probs=166.7
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC----CCCceeEEEEcCeeCCCCCC-CceEEEEcCCCC--CCC
Q 045902 188 ILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDK----SLRVSGRVTYCGHELTEFVP-QRTCAYISQHDL--HHG 260 (1472)
Q Consensus 188 iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~----~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~ 260 (1472)
+|+|+|+.+++|++++|+||||||||||+++|+|.++| + +|+|.++|+++..... ++.++|++|++. +.+
T Consensus 1 ~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~ 77 (230)
T TIGR02770 1 LVQDLNLSLKRGEVLALVGESGSGKSLTCLAILGLLPPGLTQT---SGEILLDGRPLLPLSIRGRHIATIMQNPRTAFNP 77 (230)
T ss_pred CccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCccCcc---ccEEEECCEechhhhhhhheeEEEecCchhhcCc
Confidence 57999999999999999999999999999999999987 5 8999999998765432 257999999974 556
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc---cccccc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI---CADIMV 337 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~---~~dt~v 337 (1472)
.+|+.|++.+.....+.. .... ...++.+++.+||++ ..++.+
T Consensus 78 ~~t~~~~~~~~~~~~~~~---------~~~~-------------------------~~~~~~~l~~~~l~~~~~~~~~~~ 123 (230)
T TIGR02770 78 LFTMGNHAIETLRSLGKL---------SKQA-------------------------RALILEALEAVGLPDPEEVLKKYP 123 (230)
T ss_pred ccCHHHHHHHHHHHcCcc---------HHHH-------------------------HHHHHHHHHHcCCCchHHHHhCCh
Confidence 789999997653221100 0000 011355788889873 345444
Q ss_pred cCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEE
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDII 417 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ii 417 (1472)
..|||||||||+||++++.+|++++|||||+|||..+...+.+.|+++++..++|+|++.|++. ++..++|+++
T Consensus 124 -----~~LS~G~~qrv~laral~~~p~vllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~ 197 (230)
T TIGR02770 124 -----FQLSGGMLQRVMIALALLLEPPFLIADEPTTDLDVVNQARVLKLLRELRQLFGTGILLITHDLG-VVARIADEVA 197 (230)
T ss_pred -----hhcCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 4599999999999999999999999999999999999999999999987655788888877654 7778999999
Q ss_pred EecCCeEEEecChhHHH
Q 045902 418 LLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 418 lL~~G~iv~~G~~~~~~ 434 (1472)
+|++|+++..|+.+++.
T Consensus 198 ~l~~G~i~~~~~~~~~~ 214 (230)
T TIGR02770 198 VMDDGRIVERGTVKEIF 214 (230)
T ss_pred EEECCEEEEeCCHHHHH
Confidence 99999999999988764
No 350
>TIGR00958 3a01208 Conjugate Transporter-2 (CT2) Family protein.
Probab=100.00 E-value=1.8e-33 Score=365.52 Aligned_cols=206 Identities=26% Similarity=0.393 Sum_probs=167.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++++... ++.++||+|++.+|+ .
T Consensus 494 ~~vL~~isl~i~~Ge~vaIvG~SGsGKSTLl~lL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lF~-g 569 (711)
T TIGR00958 494 VPVLKGLTFTLHPGEVVALVGPSGSGKSTVAALLQNLYQPT---GGQVLLDGVPLVQYDHHYLHRQVALVGQEPVLFS-G 569 (711)
T ss_pred CccccCceEEEcCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCEEEECCEEHHhcCHHHHHhhceEEecCccccc-c
Confidence 46999999999999999999999999999999999999998 8999999999987654 468999999998885 6
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++|||.++.... +++++.+..+.+.+ +..++ .+++..||.+|+ .+
T Consensus 570 TIreNI~~g~~~~----------------------~~e~i~~al~~a~l---------~~~i~--~lp~GldT~ige-~G 615 (711)
T TIGR00958 570 SVRENIAYGLTDT----------------------PDEEIMAAAKAANA---------HDFIM--EFPNGYDTEVGE-KG 615 (711)
T ss_pred CHHHHHhcCCCCC----------------------CHHHHHHHHHHcCC---------HHHHH--hCCCccCCcccC-CC
Confidence 9999998753210 01122222222111 12222 245667999984 57
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
..||||||||++||||++++|+|++||||||+||+.++..+.+ .. ...++|+|+..|++ ++.+.+|+|++|++|
T Consensus 616 ~~LSGGQkQRlalARALl~~p~ILILDEpTSaLD~~te~~i~~-~~---~~~~~TvIiItHrl--~~i~~aD~IivL~~G 689 (711)
T TIGR00958 616 SQLSGGQKQRIAIARALVRKPRVLILDEATSALDAECEQLLQE-SR---SRASRTVLLIAHRL--STVERADQILVLKKG 689 (711)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEEccccccCHHHHHHHHH-hh---ccCCCeEEEEeccH--HHHHhCCEEEEEECC
Confidence 7899999999999999999999999999999999999999988 22 22578999988876 466789999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
+++++|+++++.+
T Consensus 690 ~ive~Gt~~eL~~ 702 (711)
T TIGR00958 690 SVVEMGTHKQLME 702 (711)
T ss_pred EEEEeeCHHHHHh
Confidence 9999999999864
No 351
>PRK15093 antimicrobial peptide ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.2e-33 Score=329.62 Aligned_cols=217 Identities=18% Similarity=0.225 Sum_probs=168.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEEcCeeCCCCCC-------CceEEEEcCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSL-RVSGRVTYCGHELTEFVP-------QRTCAYISQHDL 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~~G~~~~~~~~-------~~~~~yv~Q~d~ 257 (1472)
..+|+|||+.|++||+++|+|+||||||||+++|+|.+++.. ..+|+|.++|+++..... ++.++||+|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~ivG~sGsGKSTLl~~i~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~~~i~~v~Q~~~ 99 (330)
T PRK15093 20 VKAVDRVSMTLTEGEIRGLVGESGSGKSLIAKAICGVTKDNWRVTADRMRFDDIDLLRLSPRERRKLVGHNVSMIFQEPQ 99 (330)
T ss_pred EEEEeeeEEEECCCCEEEEECCCCCCHHHHHHHHHccCCCCCCCcceEEEECCEECCcCCHHHHHHHhCCCEEEEecCcc
Confidence 569999999999999999999999999999999999986321 137999999998865432 246999999975
Q ss_pred --CCCCCCHHHHHHHhhhccCC-CchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccc
Q 045902 258 --HHGEMTVRETLDFSGRCLGV-GTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICAD 334 (1472)
Q Consensus 258 --~~~~lTV~E~l~f~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~d 334 (1472)
+.|.+||.+++.+....... +... .+. .+. ...+..+++.+||++..+
T Consensus 100 ~~l~p~~tv~~~l~~~~~~~~~~~~~~------~~~---------~~~--------------~~~~~~~L~~~gL~~~~~ 150 (330)
T PRK15093 100 SCLDPSERVGRQLMQNIPGWTYKGRWW------QRF---------GWR--------------KRRAIELLHRVGIKDHKD 150 (330)
T ss_pred hhcCccccHHHHHHHHHHhhhcccccc------ccH---------HHH--------------HHHHHHHHHHCCCCChHH
Confidence 67889999999753221000 0000 000 000 012356789999974321
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccC
Q 045902 335 IMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFD 414 (1472)
Q Consensus 335 t~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD 414 (1472)
+-+..+..|||||||||+||+||+.+|++|++||||+|||+.++.++.+.|+++.+..+.|+|++.|+ ...+.+++|
T Consensus 151 --~~~~~p~~LSgG~~QRv~iArAL~~~P~llilDEPts~LD~~~~~~i~~lL~~l~~~~g~tii~itHd-l~~v~~~~d 227 (330)
T PRK15093 151 --AMRSFPYELTEGECQKVMIAIALANQPRLLIADEPTNAMEPTTQAQIFRLLTRLNQNNNTTILLISHD-LQMLSQWAD 227 (330)
T ss_pred --HHhCCchhCCHHHHHHHHHHHHHHCCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHhcCCEEEEEECC-HHHHHHhCC
Confidence 11234456999999999999999999999999999999999999999999999987668888887765 457778999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 045902 415 DIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 415 ~iilL~~G~iv~~G~~~~~~ 434 (1472)
+|++|++|+|++.|+.+++.
T Consensus 228 ri~vm~~G~ive~g~~~~i~ 247 (330)
T PRK15093 228 KINVLYCGQTVETAPSKELV 247 (330)
T ss_pred EEEEEECCEEEEECCHHHHH
Confidence 99999999999999988764
No 352
>TIGR03411 urea_trans_UrtD urea ABC transporter, ATP-binding protein UrtD. Members of this protein family are ABC transporter ATP-binding subunits associated with urea transport and metabolism. This protein is found in a conserved five-gene transport operon typically found adjacent to urease genes. It was shown in Cyanobacteria that disruption leads to the loss of high-affinity urea transport activity.
Probab=100.00 E-value=2.6e-33 Score=318.58 Aligned_cols=211 Identities=24% Similarity=0.365 Sum_probs=170.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~~~ 261 (1472)
+++|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++.+++.
T Consensus 15 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 91 (242)
T TIGR03411 15 FKALNDLSLYVDPGELRVIIGPNGAGKTTMMDVITGKTRPD---EGSVLFGGTDLTGLPEHQIARAGIGRKFQKPTVFEN 91 (242)
T ss_pred eEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---CCeEEECCeecCCCCHHHHHhcCeeEeccccccCCC
Confidence 36999999999999999999999999999999999999887 8999999998765432 2469999999999999
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.+....... .+...... +.++ ....++.+++.+|+++..++.+++
T Consensus 92 ~tv~~nl~~~~~~~~~--~~~~~~~~----------~~~~--------------~~~~~~~~l~~~~l~~~~~~~~~~-- 143 (242)
T TIGR03411 92 LTVFENLELALPRDKS--VFASLFFR----------LSAE--------------EKDRIEEVLETIGLADEADRLAGL-- 143 (242)
T ss_pred CCHHHHHHHhhhcccc--cccccccc----------cHHH--------------HHHHHHHHHHHcCCchhhcCChhh--
Confidence 9999999885431100 00000000 0000 001235678889998877766654
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ ++|+|++.|++ .++.+++|++++|++
T Consensus 144 ---LS~Ge~qrv~laral~~~p~~lllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~~-~~~~~~~d~i~~l~~ 217 (242)
T TIGR03411 144 ---LSHGQKQWLEIGMLLMQDPKLLLLDEPVAGMTDEETEKTAELLKSLAG--KHSVVVVEHDM-EFVRSIADKVTVLHQ 217 (242)
T ss_pred ---CCHHHHHHHHHHHHHhcCCCEEEecCCccCCCHHHHHHHHHHHHHHhc--CCEEEEEECCH-HHHHHhCCEEEEEEC
Confidence 999999999999999999999999999999999999999999999865 57888887765 477789999999999
Q ss_pred CeEEEecChhHH
Q 045902 422 GEIVYQGPREYV 433 (1472)
Q Consensus 422 G~iv~~G~~~~~ 433 (1472)
|+++++|+.+++
T Consensus 218 g~~~~~~~~~~~ 229 (242)
T TIGR03411 218 GSVLAEGSLDQV 229 (242)
T ss_pred CeEEeeCCHHHH
Confidence 999999998765
No 353
>TIGR03740 galliderm_ABC gallidermin-class lantibiotic protection ABC transporter, ATP-binding subunit. Model TIGR03731 represents the family of all lantibiotics related to gallidermin, including epidermin, mutatin, and nisin. This protein family describes the ATP-binding subunit of a gallidermin/epidermin class lantibiotic protection transporter. It is largely restricted to gallidermin-family lantibiotic biosynthesis and export cassettes, but also occurs in orphan transporter cassettes in species that lack candidate lantibiotic precursor and synthetase genes.
Probab=100.00 E-value=2.9e-33 Score=314.16 Aligned_cols=197 Identities=29% Similarity=0.390 Sum_probs=168.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVR 265 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 265 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|+++.... .+.++|++|++.+++.+||+
T Consensus 13 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~~~~~~~~~-~~~~~~~~q~~~~~~~~t~~ 88 (223)
T TIGR03740 13 QTAVNNISLTVPKNSVYGLLGPNGAGKSTLLKMITGILRPT---SGEIIFDGHPWTRKD-LHKIGSLIESPPLYENLTAR 88 (223)
T ss_pred EEEEeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEeccccc-cccEEEEcCCCCccccCCHH
Confidence 46999999999999999999999999999999999999887 899999999875422 35799999999999999999
Q ss_pred HHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCC
Q 045902 266 ETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGI 345 (1472)
Q Consensus 266 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 345 (1472)
||+.+.....+. ++ ..+..+++.+||++..|..+++ |
T Consensus 89 ~~~~~~~~~~~~--------------------~~------------------~~~~~~l~~~~l~~~~~~~~~~-----L 125 (223)
T TIGR03740 89 ENLKVHTTLLGL--------------------PD------------------SRIDEVLNIVDLTNTGKKKAKQ-----F 125 (223)
T ss_pred HHHHHHHHHcCC--------------------CH------------------HHHHHHHHHcCCcHHHhhhHhh-----C
Confidence 999875432110 00 0124567889998877766654 9
Q ss_pred ChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEE
Q 045902 346 SGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIV 425 (1472)
Q Consensus 346 SGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv 425 (1472)
|||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++. ++.+.+|++++|++|+++
T Consensus 126 S~G~~~rv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~~g~i~ 203 (223)
T TIGR03740 126 SLGMKQRLGIAIALLNHPKLLILDEPTNGLDPIGIQELRELIRSFPE-QGITVILSSHILS-EVQQLADHIGIISEGVLG 203 (223)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEECCCccCCCHHHHHHHHHHHHHHHH-CCCEEEEEcCCHH-HHHHhcCEEEEEeCCEEE
Confidence 99999999999999999999999999999999999999999999865 5788888888764 677899999999999999
Q ss_pred EecChh
Q 045902 426 YQGPRE 431 (1472)
Q Consensus 426 ~~G~~~ 431 (1472)
+.|+..
T Consensus 204 ~~~~~~ 209 (223)
T TIGR03740 204 YQGKIN 209 (223)
T ss_pred EecChh
Confidence 999864
No 354
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=1.9e-33 Score=323.93 Aligned_cols=218 Identities=19% Similarity=0.261 Sum_probs=172.2
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+..+.. ....+.+.+|+|+|++|++||++||+|||||||||||++|+|..+ +.+|+|.++|.++.
T Consensus 5 l~~~~l~~~~~~~~~----~~~~~~~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~ 78 (267)
T PRK15112 5 LEVRNLSKTFRYRTG----WFRRQTVEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIE--PTSGELLIDDHPLH 78 (267)
T ss_pred EEEeceEEEecCCCC----cccccccceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 667888766531100 000012469999999999999999999999999999999999877 45899999998764
Q ss_pred h---hcccceeEEeccCCC--CCCCCCHHHHHHHHHHcCC--Cch---HHHHHHHHHcccc-cccccccCCCCCCCCCHH
Q 045902 958 Q---ETFARISGYCEQNDI--HSPNVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMK-ALRNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 958 ~---~~~~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgG 1026 (1472)
. ...++.++|++|++. +++.+|+.|++.+....+. ... +.++++++.+++. +..+.. +..||||
T Consensus 79 ~~~~~~~~~~i~~v~q~~~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G 153 (267)
T PRK15112 79 FGDYSYRSQRIRMIFQDPSTSLNPRQRISQILDFPLRLNTDLEPEQREKQIIETLRQVGLLPDHASYY-----PHMLAPG 153 (267)
T ss_pred CCchhhHhccEEEEecCchhhcCcchhHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCChHHHhcC-----chhcCHH
Confidence 2 123356899999975 5678899999987654431 221 3456777888773 444443 3479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
||||++||++|+.+|+||+|||||+|||+.++..+.+.|++++++ |+|||+++|+++ ++.+.||++++|++ |+++..
T Consensus 154 ~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~~-~~~~~~d~i~~l~~-G~i~~~ 231 (267)
T PRK15112 154 QKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHLG-MMKHISDQVLVMHQ-GEVVER 231 (267)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCHH-HHHHhcCEEEEEEC-CEEEec
Confidence 999999999999999999999999999999999999999999765 899999999976 46678999999985 788888
Q ss_pred cCC
Q 045902 1106 GPL 1108 (1472)
Q Consensus 1106 g~~ 1108 (1472)
|+.
T Consensus 232 ~~~ 234 (267)
T PRK15112 232 GST 234 (267)
T ss_pred CCH
Confidence 874
No 355
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=320.18 Aligned_cols=213 Identities=27% Similarity=0.343 Sum_probs=167.9
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--CC-eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--GG-YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~~-~~~G~i~i~G 953 (1472)
.+.++|+++.+. ++.+|+|+|++|++||++||+||||||||||+++|+|... +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g 71 (252)
T PRK14239 5 ILQVSDLSVYYN-------------KKKALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNG 71 (252)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECC
Confidence 366778776542 2469999999999999999999999999999999999732 21 2479999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch----HHHHHHHHHccccc-ccccccCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD----MFVEEVMELVEMKA-LRNSLVGLPGVDG 1022 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~----~~~~~v~~~l~l~~-~~~~~~~~~~~~~ 1022 (1472)
.+... ..+++.++|++|++.+++ .|++||+.+....+. ... ..++++++.+++.. +.+.. . ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~-~~~~~ 148 (252)
T PRK14239 72 HNIYSPRTDTVDLRKEIGMVFQQPNPFP-MSIYENVVYGLRLKGIKDKQVLDEAVEKSLKGASIWDEVKDRL-H-DSALG 148 (252)
T ss_pred EECcCcccchHhhhhcEEEEecCCccCc-CcHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCchhHHHHH-h-cCccc
Confidence 87531 234567999999988877 899999987643321 111 23455667776532 11111 1 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||++||+++ ++.+.+|++++|++ |++
T Consensus 149 LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~~sH~~~-~~~~~~d~i~~l~~-G~i 225 (252)
T PRK14239 149 LSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD-DYTMLLVTRSMQ-QASRISDRTGFFLD-GDL 225 (252)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh-CCeEEEEECCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999965 699999999976 57788999999985 788
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
++.|+.
T Consensus 226 ~~~g~~ 231 (252)
T PRK14239 226 IEYNDT 231 (252)
T ss_pred EEeCCH
Confidence 888875
No 356
>TIGR00972 3a0107s01c2 phosphate ABC transporter, ATP-binding protein. This model represents the ATP-binding protein of a family of ABC transporters for inorganic phosphate. In the model species Escherichia coli, a constitutive transporter for inorganic phosphate, with low affinity, is also present. The high affinity transporter that includes this polypeptide is induced when extracellular phosphate concentrations are low. The proteins most similar to the members of this family but not included appear to be amino acid transporters.
Probab=100.00 E-value=3.9e-33 Score=318.02 Aligned_cols=206 Identities=24% Similarity=0.392 Sum_probs=166.9
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCeeCCCCC-----CCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS--LRVSGRVTYCGHELTEFV-----PQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 259 (1472)
.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ ...+|+|.++|+++.... .++.++|++|++.++
T Consensus 15 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~p~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 94 (247)
T TIGR00972 15 EALKNINLDIPKNQVTALIGPSGCGKSTLLRSLNRMNDLVPGVRIEGKVLFDGQDIYDKKIDVVELRRRVGMVFQKPNPF 94 (247)
T ss_pred eeecceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceEEEECCEEccccccchHHHHhheEEEecCcccC
Confidence 5899999999999999999999999999999999998753 123799999999876421 135799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc----ccccc
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD----ICADI 335 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 335 (1472)
+ +||+||+.+..+..+... .. +. ...++.+++.+||. +..++
T Consensus 95 ~-~tv~e~l~~~~~~~~~~~---------~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~~ 140 (247)
T TIGR00972 95 P-MSIYDNIAYGPRLHGIKD---------KK----------EL--------------DEIVEESLKKAALWDEVKDRLHD 140 (247)
T ss_pred C-CCHHHHHHhHHHhcCCCC---------HH----------HH--------------HHHHHHHHHHcCCCcchhhHhhC
Confidence 8 999999987643221000 00 00 00134567888887 55555
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
.++ .|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++. ++.+++|+
T Consensus 141 ~~~-----~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivsH~~~-~~~~~~d~ 212 (247)
T TIGR00972 141 SAL-----GLSGGQQQRLCIARALAVEPEVLLLDEPTSALDPIATGKIEELIQELKK--KYTIVIVTHNMQ-QAARISDR 212 (247)
T ss_pred Ccc-----cCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--cCeEEEEecCHH-HHHHhCCE
Confidence 544 5999999999999999999999999999999999999999999999875 378888777654 67789999
Q ss_pred EEEecCCeEEEecChhHHH
Q 045902 416 IILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~ 434 (1472)
+++|++|+++++|+.+++.
T Consensus 213 i~~l~~G~i~~~~~~~~~~ 231 (247)
T TIGR00972 213 TAFFYDGELVEYGPTEQIF 231 (247)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999987763
No 357
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=2.5e-33 Score=356.46 Aligned_cols=207 Identities=25% Similarity=0.407 Sum_probs=170.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 353 ~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~ 428 (574)
T PRK11160 353 QPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWDPQ---QGEILLNGQPIADYSEAALRQAISVVSQRVHLFS-A 428 (574)
T ss_pred CcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEhhhCCHHHHHhheeEEcccchhhc-c
Confidence 35899999999999999999999999999999999999998 9999999999987654 467999999988876 5
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++||+.++..- .+++++.+..+.+.+ +..+ -. ++..||.+|+ .+
T Consensus 429 ti~~Ni~~~~~~----------------------~~~~~i~~al~~~~l---------~~~i--~~-p~GldT~vge-~g 473 (574)
T PRK11160 429 TLRDNLLLAAPN----------------------ASDEALIEVLQQVGL---------EKLL--ED-DKGLNAWLGE-GG 473 (574)
T ss_pred cHHHHhhcCCCc----------------------cCHHHHHHHHHHcCC---------HHHH--cC-ccccCchhcC-CC
Confidence 999999875310 011122222222211 1111 12 5567999984 57
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
+.||||||||++||||++.+|++|+|||||++||+.++..+.+.|+++. .++|+|++.|+++ ....+|+|++|++|
T Consensus 474 ~~LSgGqrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~--~~~tviiitHr~~--~~~~~d~i~~l~~G 549 (574)
T PRK11160 474 RQLSGGEQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA--QNKTVLMITHRLT--GLEQFDRICVMDNG 549 (574)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc--CCCEEEEEecChh--HHHhCCEEEEEeCC
Confidence 7899999999999999999999999999999999999999999999875 4789999888874 45679999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
++++.|+++++.+
T Consensus 550 ~i~~~g~~~~l~~ 562 (574)
T PRK11160 550 QIIEQGTHQELLA 562 (574)
T ss_pred eEEEeCCHHHHHh
Confidence 9999999998864
No 358
>PRK13652 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.8e-33 Score=324.07 Aligned_cols=205 Identities=25% Similarity=0.377 Sum_probs=170.8
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCC-CCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDL-HHGEM 262 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~l 262 (1472)
.+|+|+|+++++||+++|+||||||||||+++|+|.++|+ +|+|.++|.++..... ++.++|++|++. .+...
T Consensus 18 ~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~~ 94 (277)
T PRK13652 18 EALNNINFIAPRNSRIAVIGPNGAGKSTLFRHFNGILKPT---SGSVLIRGEPITKENIREVRKFVGLVFQNPDDQIFSP 94 (277)
T ss_pred ceeeEeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEECCcCCHHHHHhheEEEecCcccccccc
Confidence 4899999999999999999999999999999999999987 9999999998764322 356899999963 34468
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||.||+.+.....+.. .. +. ...++.+++.+||.+..++.+.
T Consensus 95 tv~~~l~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~---- 136 (277)
T PRK13652 95 TVEQDIAFGPINLGLD----------EE----------TV--------------AHRVSSALHMLGLEELRDRVPH---- 136 (277)
T ss_pred cHHHHHHhHHHHcCCC----------HH----------HH--------------HHHHHHHHHHCCChhHhcCCcc----
Confidence 9999998754321110 00 00 0123567889999887777665
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
.||||||||++||+||+.+|++|+|||||+|||+.++..+.+.|+++++..+.|++++.|++. ++.+.+|++++|++|
T Consensus 137 -~LS~Gq~qrl~laraL~~~p~llilDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~~~~~drv~~l~~G 214 (277)
T PRK13652 137 -HLSGGEKKRVAIAGVIAMEPQVLVLDEPTAGLDPQGVKELIDFLNDLPETYGMTVIFSTHQLD-LVPEMADYIYVMDKG 214 (277)
T ss_pred -cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEECC
Confidence 499999999999999999999999999999999999999999999997755789888887654 777899999999999
Q ss_pred eEEEecChhHHH
Q 045902 423 EIVYQGPREYVL 434 (1472)
Q Consensus 423 ~iv~~G~~~~~~ 434 (1472)
++++.|+.+++.
T Consensus 215 ~i~~~g~~~~~~ 226 (277)
T PRK13652 215 RIVAYGTVEEIF 226 (277)
T ss_pred eEEEECCHHHHh
Confidence 999999998874
No 359
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=9.6e-34 Score=290.82 Aligned_cols=197 Identities=27% Similarity=0.389 Sum_probs=168.4
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYE 982 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 982 (1472)
..+|+|||++|.+||.++++||||||||||||+++|..+ +..|+|.+||.++....- ..|.|+|++.++|-+|+.|
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~--P~~G~i~l~~r~i~gPga--ergvVFQ~~~LlPWl~~~d 93 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVT--PSRGSIQLNGRRIEGPGA--ERGVVFQNEALLPWLNVID 93 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcC--cccceEEECCEeccCCCc--cceeEeccCccchhhHHHH
Confidence 459999999999999999999999999999999999987 458999999998754322 3489999999999999999
Q ss_pred HHHHHHHcCCCch----HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHH
Q 045902 983 SLLYSAWLRLPKD----MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1058 (1472)
Q Consensus 983 ~l~~~~~l~~~~~----~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~ 1058 (1472)
|+.|+..++.-.+ +...+.+..+||.+..++.+ -.||||||||+.|||||+.+|+.|+||||.+.||+-++
T Consensus 94 NvafgL~l~Gi~k~~R~~~a~q~l~~VgL~~~~~~~i-----~qLSGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tR 168 (259)
T COG4525 94 NVAFGLQLRGIEKAQRREIAHQMLALVGLEGAEHKYI-----WQLSGGMRQRVGIARALAVEPQLLLLDEPFGALDALTR 168 (259)
T ss_pred HHHHHHHhcCCCHHHHHHHHHHHHHHhCcccccccce-----EeecchHHHHHHHHHHhhcCcceEeecCchhhHHHHHH
Confidence 9999998875433 34556677777777766553 47999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHh-hCCCEEEEEecCccHHHHHhhCeEEEEecC-cEEEEEcCCC
Q 045902 1059 AIVMRTVRNTV-DTGRTVVCTIHQPSIDIFEAFDELFLMKRG-GHVIYAGPLG 1109 (1472)
Q Consensus 1059 ~~i~~~l~~l~-~~g~tvi~t~H~~~~~~~~~~D~v~~l~~g-g~v~~~g~~~ 1109 (1472)
+.++++|-++. ++|+.++++||+.+ +..-.++++++|+.+ |+|+..-|++
T Consensus 169 e~mQelLldlw~~tgk~~lliTH~ie-EAlflatrLvvlsp~pgRvv~~~~~d 220 (259)
T COG4525 169 EQMQELLLDLWQETGKQVLLITHDIE-EALFLATRLVVLSPGPGRVVERLPLD 220 (259)
T ss_pred HHHHHHHHHHHHHhCCeEEEEeccHH-HHHhhhheeEEecCCCceeeEecCCC
Confidence 99999999886 45999999999976 444567999999743 6888777764
No 360
>PRK13640 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-33 Score=323.79 Aligned_cols=208 Identities=25% Similarity=0.307 Sum_probs=170.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCC-CCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDL-HHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 261 (1472)
+++|+|+|++|++||+++|+||||||||||+++|+|.++++...+|+|.++|.++..... ++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGaGKSTLl~~l~G~~~p~~g~~G~i~i~g~~~~~~~~~~~~~~ig~v~q~~~~~~~~ 99 (282)
T PRK13640 20 KPALNDISFSIPRGSWTALIGHNGSGKSTISKLINGLLLPDDNPNSKITVDGITLTAKTVWDIREKVGIVFQNPDNQFVG 99 (282)
T ss_pred ccceeeEEEEEcCCCEEEEECCCCCcHHHHHHHHhcccCCCCCCCcEEEECCEECCcCCHHHHHhheEEEEECHHHhhcc
Confidence 358999999999999999999999999999999999998862223999999998865322 357999999974 6778
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.|..+..+.. ..+ . ...++.+++.+||++..++.+.
T Consensus 100 ~tv~enl~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~~L~~~~~~~~~--- 142 (282)
T PRK13640 100 ATVGDDVAFGLENRAVP----------RPE----------M--------------IKIVRDVLADVGMLDYIDSEPA--- 142 (282)
T ss_pred CCHHHHHHhhHHhCCCC----------HHH----------H--------------HHHHHHHHHHCCChhHhcCCcc---
Confidence 99999998754321110 000 0 0013557888999877776654
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
.|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++++..+.|+|++.|++. ++ ..+|++++|++
T Consensus 143 --~LS~G~~qrv~laral~~~P~llllDEPt~gLD~~~~~~l~~~l~~l~~~~g~tvli~tH~~~-~~-~~~d~i~~l~~ 218 (282)
T PRK13640 143 --NLSGGQKQRVAIAGILAVEPKIIILDESTSMLDPAGKEQILKLIRKLKKKNNLTVISITHDID-EA-NMADQVLVLDD 218 (282)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEECCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HH-HhCCEEEEEEC
Confidence 599999999999999999999999999999999999999999999997655889999888775 44 57999999999
Q ss_pred CeEEEecChhHHH
Q 045902 422 GEIVYQGPREYVL 434 (1472)
Q Consensus 422 G~iv~~G~~~~~~ 434 (1472)
|++++.|+++++.
T Consensus 219 G~i~~~g~~~~~~ 231 (282)
T PRK13640 219 GKLLAQGSPVEIF 231 (282)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999998774
No 361
>PRK14253 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=319.04 Aligned_cols=213 Identities=23% Similarity=0.300 Sum_probs=167.8
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISGY 954 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G~ 954 (1472)
+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 70 (249)
T PRK14253 4 FNIENLDLFY-------------GENQALKSINLPIPARQVTALIGPSGCGKSTLLRCLNRMNDLIEGVKITGKLTMDGE 70 (249)
T ss_pred EEEeccEEEE-------------CCeeeeecceEEecCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCE
Confidence 5566766544 2346999999999999999999999999999999999986532 35899999998
Q ss_pred cCC----hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcC-CCch----HHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 955 PKK----QETFARISGYCEQNDIHSPNVTIYESLLYSAWLR-LPKD----MFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 955 ~~~----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-~~~~----~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
++. ....++.++|++|++.+++ .|+.||+.+..... ...+ ..++++++.+++.+....... .....|||
T Consensus 71 ~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~LS~ 148 (249)
T PRK14253 71 DIYGNIDVADLRIKVGMVFQKPNPFP-MSIYENVAYGLRAQGIKDKKVLDEVVERSLRGAALWDEVKDRLK-SHAFGLSG 148 (249)
T ss_pred EcccccchHHHHhheeEEecCCCcCc-ccHHHHHHhHHHhcCCCchHHHHHHHHHHHHHcCCchhhhHHhh-cCcccCCH
Confidence 753 1234567999999998887 89999998764332 1111 234456666665421111111 12357999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
|||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|++ |+++..
T Consensus 149 G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tii~~sh~~~-~~~~~~d~i~~l~~-G~i~~~ 225 (249)
T PRK14253 149 GQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKIEELMEELKK-NYTIVIVTHSMQ-QARRISDRTAFFLM-GELVEH 225 (249)
T ss_pred HHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEecCHH-HHHHhCCEEEEEEC-CEEEEe
Confidence 999999999999999999999999999999999999999999975 589999999976 57788999999985 789888
Q ss_pred cCC
Q 045902 1106 GPL 1108 (1472)
Q Consensus 1106 g~~ 1108 (1472)
|+.
T Consensus 226 g~~ 228 (249)
T PRK14253 226 DDT 228 (249)
T ss_pred CCH
Confidence 874
No 362
>PRK13539 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=2e-33 Score=311.60 Aligned_cols=185 Identities=26% Similarity=0.362 Sum_probs=156.6
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCHHH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTIYE 982 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv~e 982 (1472)
+.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+......++.++|++|++.+++.+|+.|
T Consensus 15 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~tv~~ 92 (207)
T PRK13539 15 RVLFSGLSFTLAAGEALVLTGPNGSGKTTLLRLIAGLLP--PAAGTIKLDGGDIDDPDVAEACHYLGHRNAMKPALTVAE 92 (207)
T ss_pred eEEEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEeCcchhhHhhcEEecCCCcCCCCCcHHH
Confidence 469999999999999999999999999999999999876 458999999987532225667899999988888999999
Q ss_pred HHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHH
Q 045902 983 SLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVM 1062 (1472)
Q Consensus 983 ~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~ 1062 (1472)
++.+....+...+..++++++.+++.+..+... ..||||||||++||++|+.+|++|+|||||+|||+.+...++
T Consensus 93 ~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~ 167 (207)
T PRK13539 93 NLEFWAAFLGGEELDIAAALEAVGLAPLAHLPF-----GYLSAGQKRRVALARLLVSNRPIWILDEPTAALDAAAVALFA 167 (207)
T ss_pred HHHHHHHhcCCcHHHHHHHHHHcCCHHHHcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHH
Confidence 998765443223345788888888876555443 479999999999999999999999999999999999999999
Q ss_pred HHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEe
Q 045902 1063 RTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK 1097 (1472)
Q Consensus 1063 ~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~ 1097 (1472)
+.|++++++|+|||++||+++ .... |+++.+.
T Consensus 168 ~~l~~~~~~~~tiii~sH~~~--~~~~-~~~~~~~ 199 (207)
T PRK13539 168 ELIRAHLAQGGIVIAATHIPL--GLPG-ARELDLG 199 (207)
T ss_pred HHHHHHHHCCCEEEEEeCCch--hhcc-CcEEeec
Confidence 999998878999999999975 3334 8887764
No 363
>PRK14263 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.9e-33 Score=319.94 Aligned_cols=203 Identities=21% Similarity=0.266 Sum_probs=165.3
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCccCCh-----hcccceeEEeccCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISGYPKKQ-----ETFARISGYCEQNDI 973 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G~~~~~-----~~~~~~~gyv~Q~~~ 973 (1472)
+..+|+|+|++++|||++||+|+||||||||+++|+|..++. +.+|+|.++|.++.. ..+++.++|++|++.
T Consensus 20 ~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~ 99 (261)
T PRK14263 20 NFMAVRDSHVPIRKNEITGFIGPSGCGKSTVLRSLNRMNDLVKGFRFEGHVHFLGQDVYGKGVDPVVVRRYIGMVFQQPN 99 (261)
T ss_pred CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHcccccccCCCCceEEEECCEeccccccchHhhhhceEEEecCCc
Confidence 457999999999999999999999999999999999987531 258999999987532 234567999999988
Q ss_pred CCCCCCHHHHHHHHHHcCCCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 045902 974 HSPNVTIYESLLYSAWLRLPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1050 (1472)
Q Consensus 974 ~~~~lTv~e~l~~~~~l~~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPT 1050 (1472)
++ .+|+.||+.+....+... ...++++++.+++.+..+...+ ...+.||||||||++|||||+.+|++|+|||||
T Consensus 100 ~~-~~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~-~~~~~LS~G~~qrv~laral~~~p~llllDEPt 177 (261)
T PRK14263 100 PF-SMSIFDNVAFGLRLNRYKGDLGDRVKHALQGAALWDEVKDKLK-VSGLSLSGGQQQRLCIARAIATEPEVLLLDEPC 177 (261)
T ss_pred cc-cccHHHHHHHHHhhcCchHHHHHHHHHHHHHcCCchhhhhhhh-CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCC
Confidence 77 599999998875433211 1345677777776432221221 124579999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEe-------cCcEEEEEcCC
Q 045902 1051 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-------RGGHVIYAGPL 1108 (1472)
Q Consensus 1051 sgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~-------~gg~v~~~g~~ 1108 (1472)
+|||+.++..+.+.|+++. +++|||+++|+++ ++.+.+|++++|+ ++|+++..|+.
T Consensus 178 sgLD~~~~~~l~~~l~~~~-~~~tii~isH~~~-~i~~~~d~v~~l~~~~~~~~~~G~i~~~g~~ 240 (261)
T PRK14263 178 SALDPIATRRVEELMVELK-KDYTIALVTHNMQ-QAIRVADTTAFFSVDISQGTRTGYLVEMGPT 240 (261)
T ss_pred ccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHHhCCEEEEEecccccccCCceEEEeCCH
Confidence 9999999999999999996 4799999999976 4778899999996 45899999875
No 364
>PRK15439 autoinducer 2 ABC transporter ATP-binding protein LsrA; Provisional
Probab=100.00 E-value=1.5e-33 Score=353.47 Aligned_cols=212 Identities=21% Similarity=0.330 Sum_probs=177.1
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+|+||+|++|+++||+|||||||||||++|+|..+ +.+|+|.++|.++
T Consensus 11 ~l~~~~l~~~~-------------~~~~il~~vsl~i~~Ge~~~liG~NGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 75 (510)
T PRK15439 11 LLCARSISKQY-------------SGVEVLKGIDFTLHAGEVHALLGGNGAGKSTLMKIIAGIVP--PDSGTLEIGGNPC 75 (510)
T ss_pred eEEEEeEEEEe-------------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEC
Confidence 36778887664 23469999999999999999999999999999999999876 3589999999875
Q ss_pred Ch---hc-ccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHH
Q 045902 957 KQ---ET-FARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLT 1032 (1472)
Q Consensus 957 ~~---~~-~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~ 1032 (1472)
.. .. .++.+||++|++.+++.+||+|++.+.........+.++++++.+++.+..+..+ ..|||||||||+
T Consensus 76 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~ 150 (510)
T PRK15439 76 ARLTPAKAHQLGIYLVPQEPLLFPNLSVKENILFGLPKRQASMQKMKQLLAALGCQLDLDSSA-----GSLEVADRQIVE 150 (510)
T ss_pred CCCCHHHHHhCCEEEEeccCccCCCCcHHHHhhcccccchHHHHHHHHHHHHcCCCccccCCh-----hhCCHHHHHHHH
Confidence 32 11 2245899999999999999999998753211111245677888888877666554 479999999999
Q ss_pred HHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1033 IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1033 iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ .+.+.||++++|.+ |++++.|+..+
T Consensus 151 la~aL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiivtHd~~-~~~~~~d~i~~l~~-G~i~~~g~~~~ 226 (510)
T PRK15439 151 ILRGLMRDSRILILDEPTASLTPAETERLFSRIRELLAQGVGIVFISHKLP-EIRQLADRISVMRD-GTIALSGKTAD 226 (510)
T ss_pred HHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEEecChHH
Confidence 999999999999999999999999999999999999888999999999976 46788999999985 78888888643
No 365
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3e-33 Score=323.86 Aligned_cols=212 Identities=24% Similarity=0.335 Sum_probs=173.8
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+.. ..+..+|+|||+++++||++||+|+||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 4 ~l~~~~l~~~~~~----------~~~~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~i 71 (277)
T PRK13642 4 ILEVENLVFKYEK----------ESDVNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFE--EFEGKVKIDGELL 71 (277)
T ss_pred eEEEEEEEEEcCC----------CCcCeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCC--CCCCEEEECCEEC
Confidence 3677887766521 012359999999999999999999999999999999999877 4589999999876
Q ss_pred Ch---hcccceeEEeccCCC-CCCCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHH
Q 045902 957 KQ---ETFARISGYCEQNDI-HSPNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQR 1028 (1472)
Q Consensus 957 ~~---~~~~~~~gyv~Q~~~-~~~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqr 1028 (1472)
.. ...++.+||++|++. .++..||.||+.+..... .... +.++++++.+++.+..++. +..||||||
T Consensus 72 ~~~~~~~~~~~i~~v~q~~~~~~~~~tv~eni~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~G~~ 146 (277)
T PRK13642 72 TAENVWNLRRKIGMVFQNPDNQFVGATVEDDVAFGMENQGIPREEMIKRVDEALLAVNMLDFKTRE-----PARLSGGQK 146 (277)
T ss_pred CcCCHHHHhcceEEEEECHHHhhccCCHHHHHHhhHHHcCCCHHHHHHHHHHHHHHCCCHhHhhCC-----cccCCHHHH
Confidence 43 234567999999974 567789999998765432 1221 3456788888887766654 347999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcC
Q 045902 1029 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGP 1107 (1472)
Q Consensus 1029 qRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~ 1107 (1472)
||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++. + ..+|++++|++ |+++..|+
T Consensus 147 qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~~-~-~~~d~i~~l~~-G~i~~~g~ 223 (277)
T PRK13642 147 QRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLDE-A-ASSDRILVMKA-GEIIKEAA 223 (277)
T ss_pred HHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEEeCC
Confidence 9999999999999999999999999999999999999999875 9999999999763 4 46999999986 68888887
Q ss_pred C
Q 045902 1108 L 1108 (1472)
Q Consensus 1108 ~ 1108 (1472)
.
T Consensus 224 ~ 224 (277)
T PRK13642 224 P 224 (277)
T ss_pred H
Confidence 5
No 366
>PRK13641 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=2.3e-33 Score=326.38 Aligned_cols=205 Identities=22% Similarity=0.318 Sum_probs=168.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-------CCceEEEEcCCCC-
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-------PQRTCAYISQHDL- 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~- 257 (1472)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++.
T Consensus 20 ~~~l~~vsl~i~~Ge~~~iiG~NGaGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~~~~ig~v~q~~~~ 96 (287)
T PRK13641 20 KKGLDNISFELEEGSFVALVGHTGSGKSTLMQHFNALLKPS---SGTITIAGYHITPETGNKNLKKLRKKVSLVFQFPEA 96 (287)
T ss_pred ccceeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEECccccccchHHHHHhceEEEEeChhh
Confidence 46999999999999999999999999999999999999997 999999999875421 1346999999962
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-cccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADIM 336 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 336 (1472)
.+..+||+||+.|+....+.. ..+ . ...++.+++.+||+ ...++.
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~~----------~~~----------~--------------~~~~~~~l~~~gL~~~~~~~~ 142 (287)
T PRK13641 97 QLFENTVLKDVEFGPKNFGFS----------EDE----------A--------------KEKALKWLKKVGLSEDLISKS 142 (287)
T ss_pred hhccchHHHHHHHHHHHcCCC----------HHH----------H--------------HHHHHHHHHHcCCChhHhhCC
Confidence 344689999998754321110 000 0 00135578889997 566766
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 337 VGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 337 vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
+++ |||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|+ ..++.+++|++
T Consensus 143 ~~~-----LSgGq~qrl~laral~~~p~lLlLDEPt~gLD~~~~~~l~~~l~~l~~-~g~tvlivsH~-~~~~~~~~d~v 215 (287)
T PRK13641 143 PFE-----LSGGQMRRVAIAGVMAYEPEILCLDEPAAGLDPEGRKEMMQLFKDYQK-AGHTVILVTHN-MDDVAEYADDV 215 (287)
T ss_pred ccc-----CCHHHHHHHHHHHHHHcCCCEEEEECCCCCCCHHHHHHHHHHHHHHHh-CCCEEEEEeCC-HHHHHHhCCEE
Confidence 654 999999999999999999999999999999999999999999999865 57888887765 45778899999
Q ss_pred EEecCCeEEEecChhHHH
Q 045902 417 ILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~~ 434 (1472)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (287)
T PRK13641 216 LVLEHGKLIKHASPKEIF 233 (287)
T ss_pred EEEECCEEEEeCCHHHHh
Confidence 999999999999988764
No 367
>TIGR01978 sufC FeS assembly ATPase SufC. SufC is part of the SUF system, shown in E. coli to consist of six proteins and believed to act in Fe-S cluster formation during oxidative stress. SufC forms a complex with SufB and SufD. SufC belongs to the ATP-binding cassette transporter family (pfam00005) but is no longer thought to be part of a transporter. The complex is reported as cytosolic (PubMed:12554644) or associated with the membrane (PubMed:11943156). The SUF system also includes a cysteine desulfurase (SufS, enhanced by SufE) and a probable iron-sulfur cluster assembly scaffold protein, SufA.
Probab=100.00 E-value=4e-33 Score=317.36 Aligned_cols=213 Identities=25% Similarity=0.290 Sum_probs=168.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKS--DKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~--~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~~~ 259 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.. +++ +|+|.++|+++..... +..++|++|++.++
T Consensus 13 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~ 89 (243)
T TIGR01978 13 KEILKGVNLTVKKGEIHAIMGPNGSGKSTLSKTIAGHPSYEVT---SGTILFKGQDLLELEPDERARAGLFLAFQYPEEI 89 (243)
T ss_pred EEEEeccceEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCC---cceEEECCEecCCCCHHHhhccceEeeecccccc
Confidence 46999999999999999999999999999999999995 565 8999999998765432 23489999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-cccccccc
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADIMVG 338 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg 338 (1472)
+.+|++|++.+......... ... . .+..+. ...++.+++.+||+ ...++.++
T Consensus 90 ~~~t~~~~~~~~~~~~~~~~----------~~~--~-~~~~~~--------------~~~~~~~l~~~~l~~~~~~~~~~ 142 (243)
T TIGR01978 90 PGVSNLEFLRSALNARRSAR----------GEE--P-LDLLDF--------------LKLLKAKLALLGMDEEFLNRSVN 142 (243)
T ss_pred CCcCHHHHHHHHHHHhhccc----------ccc--c-ccHHHH--------------HHHHHHHHHHcCCchhhcccccc
Confidence 99999999987543211000 000 0 000000 01235678889997 45565543
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhc-cCeEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDL-FDDII 417 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~-fD~ii 417 (1472)
..|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++. ++.+. +|+++
T Consensus 143 ----~~LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~vsH~~~-~~~~~~~d~i~ 216 (243)
T TIGR01978 143 ----EGFSGGEKKRNEILQMALLEPKLAILDEIDSGLDIDALKIVAEGINRLRE-PDRSFLIITHYQR-LLNYIKPDYVH 216 (243)
T ss_pred ----cCcCHHHHHHHHHHHHHhcCCCEEEecCCcccCCHHHHHHHHHHHHHHHH-CCcEEEEEEecHH-HHHhhcCCeEE
Confidence 14999999999999999999999999999999999999999999999865 5788888887764 56666 79999
Q ss_pred EecCCeEEEecChhHHH
Q 045902 418 LLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 418 lL~~G~iv~~G~~~~~~ 434 (1472)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~i~~~g~~~~~~ 233 (243)
T TIGR01978 217 VLLDGRIVKSGDVELAK 233 (243)
T ss_pred EEeCCEEEEecCHHHhc
Confidence 99999999999987654
No 368
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.6e-33 Score=319.04 Aligned_cols=213 Identities=24% Similarity=0.359 Sum_probs=168.7
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISGY 954 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G~ 954 (1472)
+.++|+++.+ +++.+|+|+||++++||+++|+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~ 70 (250)
T PRK14262 4 IEIENFSAYY-------------GEKKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQ 70 (250)
T ss_pred EEEEeeEEEe-------------CCceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCE
Confidence 5677776554 2346999999999999999999999999999999999976521 25899999998
Q ss_pred cCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch----HHHHHHHHHcccccccccccCCCCCCCCC
Q 045902 955 PKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD----MFVEEVMELVEMKALRNSLVGLPGVDGLS 1024 (1472)
Q Consensus 955 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~----~~~~~v~~~l~l~~~~~~~~~~~~~~~LS 1024 (1472)
++.. ...++.++|++|++.+++ .|++||+.+...... ... ..++++++.+++....+.... ..+..||
T Consensus 71 ~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~e~l~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~-~~~~~LS 148 (250)
T PRK14262 71 DIYDPQLDVTEYRKKVGMVFQKPTPFP-MSIYDNVAFGPRIHGVKSKHKLDRIVEESLKKAALWDEVKSELN-KPGTRLS 148 (250)
T ss_pred EcccchhhHHHhhhhEEEEecCCccCc-ccHHHHHHHHHHHcCCCcHHHHHHHHHHHHHHcCCCchhHHHHh-CChhhcC
Confidence 7532 234567999999998887 899999987643321 111 234566777776432111111 1245799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1025 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1025 gGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
||||||++||+||+.+|++|+|||||+|||+.++..+++.|+++++ ++|||++||+++ ++.+.+|++++|++ |+++.
T Consensus 149 ~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tili~sH~~~-~~~~~~d~i~~l~~-G~i~~ 225 (250)
T PRK14262 149 GGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE-NYTIVIVTHNIG-QAIRIADYIAFMYR-GELIE 225 (250)
T ss_pred HHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc-CcEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999865 799999999976 47788999999986 78888
Q ss_pred EcCC
Q 045902 1105 AGPL 1108 (1472)
Q Consensus 1105 ~g~~ 1108 (1472)
.|+.
T Consensus 226 ~g~~ 229 (250)
T PRK14262 226 YGPT 229 (250)
T ss_pred ecCH
Confidence 8875
No 369
>PRK14242 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.6e-33 Score=316.44 Aligned_cols=209 Identities=24% Similarity=0.346 Sum_probs=161.6
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCeeCCCCC-----CCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD--KSLRVSGRVTYCGHELTEFV-----PQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~~ 259 (1472)
.+|+|+|+.+++||+++|+|||||||||||++|+|..+ +....+|+|.++|+++.... .++.++|++|++.++
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 99 (253)
T PRK14242 20 QALHDISLEFEQNQVTALIGPSGCGKSTFLRCLNRMNDLIPGARVEGEILLDGENIYDPHVDVVELRRRVGMVFQKPNPF 99 (253)
T ss_pred eeecceeEEEeCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCCceEEEECCEEccccccCHHHHhhcEEEEecCCCCC
Confidence 58999999999999999999999999999999999864 10012899999999875321 135799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+ .||+||+.+.....+.... .+.+ ..++.+++.+||.+..++.. +
T Consensus 100 ~-~tv~enl~~~~~~~~~~~~-------------------~~~~--------------~~~~~~l~~~~l~~~~~~~~-~ 144 (253)
T PRK14242 100 P-KSIFENVAYGLRVNGVKDK-------------------AYLA--------------ERVERSLRHAALWDEVKDRL-H 144 (253)
T ss_pred c-CcHHHHHHHHHHHcCCCCH-------------------HHHH--------------HHHHHHHHHcCCchhhhHHh-h
Confidence 7 5999999886432211000 0000 01234566677743211111 1
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
...+.|||||||||+||++|+.+|++|+|||||+|||..++..+.+.|+++.+ +.|+|++.|++ .++.+++|++++|
T Consensus 145 ~~~~~LSgGq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tvii~tH~~-~~~~~~~d~v~~l 221 (253)
T PRK14242 145 ESALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHELKA--RYTIIIVTHNM-QQAARVSDVTAFF 221 (253)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCeEEEEEecH-HHHHHhCCEEEEE
Confidence 33456999999999999999999999999999999999999999999999853 57888887765 4677899999999
Q ss_pred cCCeEEEecChhHH
Q 045902 420 SEGEIVYQGPREYV 433 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~ 433 (1472)
++|+++..|+.+++
T Consensus 222 ~~G~i~~~g~~~~~ 235 (253)
T PRK14242 222 YMGKLIEVGPTEQI 235 (253)
T ss_pred ECCEEEEeCCHHHH
Confidence 99999999998766
No 370
>cd03300 ABC_PotA_N PotA is an ABC-type transporter and the ATPase component of the spermidine/putrescine-preferential uptake system consisting of PotA, -B, -C, and -D. PotA has two domains with the N-terminal domain containing the ATPase activity and the residues required for homodimerization with PotA and heterdimerization with PotB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.5e-33 Score=314.48 Aligned_cols=206 Identities=27% Similarity=0.364 Sum_probs=173.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+++|+|+|+.++||++++|+||||||||||+++|+|.++++ +|+|+++|+++.+... ++.++|++|++..++.+||
T Consensus 13 ~~il~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~g~~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (232)
T cd03300 13 FVALDGVSLDIKEGEFFTLLGPSGCGKTTLLRLIAGFETPT---SGEILLDGKDITNLPPHKRPVNTVFQNYALFPHLTV 89 (232)
T ss_pred eeeeccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcceEEEecccccCCCCcH
Confidence 36999999999999999999999999999999999999987 8999999998865432 4679999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.+.....+... . .. ....+.+++.+||++..++.+. .
T Consensus 90 ~~nl~~~~~~~~~~~--~------------------~~--------------~~~~~~~l~~~~l~~~~~~~~~-----~ 130 (232)
T cd03300 90 FENIAFGLRLKKLPK--A------------------EI--------------KERVAEALDLVQLEGYANRKPS-----Q 130 (232)
T ss_pred HHHHHHHHHhcCCCH--H------------------HH--------------HHHHHHHHHHcCCchhhcCChh-----h
Confidence 999987643221100 0 00 0013567888999887776664 5
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~~~~~tiii~sh~~-~~~~~~~d~i~~l~~G~~ 209 (232)
T cd03300 131 LSGGQQQRVAIARALVNEPKVLLLDEPLGALDLKLRKDMQLELKRLQKELGITFVFVTHDQ-EEALTMSDRIAVMNKGKI 209 (232)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCH-HHHHHhcCEEEEEECCEE
Confidence 9999999999999999999999999999999999999999999998765578999988776 467889999999999999
Q ss_pred EEecChhHHH
Q 045902 425 VYQGPREYVL 434 (1472)
Q Consensus 425 v~~G~~~~~~ 434 (1472)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (232)
T cd03300 210 QQIGTPEEIY 219 (232)
T ss_pred EecCCHHHHH
Confidence 9999877653
No 371
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.7e-33 Score=326.07 Aligned_cols=211 Identities=20% Similarity=0.312 Sum_probs=166.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCeeCCCC-----CCCceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS--LRVSGRVTYCGHELTEF-----VPQRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 258 (1472)
..+|+|+|+.|++||+++|+|||||||||||++|+|..++. ...+|+|.++|+++... ..++.++||+|++.+
T Consensus 95 ~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG~~i~~~~~~~~~lr~~i~~v~q~~~~ 174 (329)
T PRK14257 95 KHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLGTNTRSKKISSLELRTRIGMVFQKPTP 174 (329)
T ss_pred ceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHhhhccEEEEecCCcc
Confidence 35899999999999999999999999999999999997531 01279999999998632 224679999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
++ .||+||+.|+....+.. ..+. .+ ..++.+++.++|.+..++.++
T Consensus 175 ~~-~ti~eNi~~~~~~~~~~----------~~~~---------~~--------------~~~~~~l~~~~L~~~l~~~~~ 220 (329)
T PRK14257 175 FE-MSIFDNVAYGPRNNGIN----------DRKI---------LE--------------KIVEKSLKSAALWDEVKDDLD 220 (329)
T ss_pred CC-CcHHHHHHhHHHhcCCC----------hHHH---------HH--------------HHHHHHHHHcCCcchhhhhhh
Confidence 84 79999999864321100 0000 00 012334566666443344444
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
+.+..|||||||||+||||++.+|+||+|||||+|||+.+...+.+.|+++.+ ++|+|++.|++ ..+.+.+|+|++
T Consensus 221 -~~~~~LSgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~--~~Tii~iTH~l-~~i~~~~Driiv 296 (329)
T PRK14257 221 -KAGNALSGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK--KYSIIIVTHSM-AQAQRISDETVF 296 (329)
T ss_pred -CCcccCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhCCEEEE
Confidence 45677999999999999999999999999999999999999999999999864 57888887765 466778999999
Q ss_pred ecCCeEEEecChhHHH
Q 045902 419 LSEGEIVYQGPREYVL 434 (1472)
Q Consensus 419 L~~G~iv~~G~~~~~~ 434 (1472)
|++|++++.|+++++.
T Consensus 297 l~~G~i~e~g~~~~l~ 312 (329)
T PRK14257 297 FYQGWIEEAGETKTIF 312 (329)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999999874
No 372
>KOG0056 consensus Heavy metal exporter HMT1, ABC superfamily [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.2e-34 Score=326.16 Aligned_cols=209 Identities=25% Similarity=0.392 Sum_probs=174.6
Q ss_pred cceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC---CCceEEEEcCCCCCCCC
Q 045902 185 KLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV---PQRTCAYISQHDLHHGE 261 (1472)
Q Consensus 185 ~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~~ 261 (1472)
++++|+||||++.||+.+|++||||+||||+|++|-...+-+ +|.|++||+++.... .++.+|.|||+..+|.+
T Consensus 550 ~k~vl~disF~v~pGktvAlVG~SGaGKSTimRlLfRffdv~---sGsI~iDgqdIrnvt~~SLRs~IGVVPQDtvLFNd 626 (790)
T KOG0056|consen 550 GKPVLSDISFTVQPGKTVALVGPSGAGKSTIMRLLFRFFDVN---SGSITIDGQDIRNVTQSSLRSSIGVVPQDTVLFND 626 (790)
T ss_pred CCceeecceEEecCCcEEEEECCCCCchhHHHHHHHHHhhcc---CceEEEcCchHHHHHHHHHHHhcCcccCcceeecc
Confidence 357999999999999999999999999999999999999887 999999999987643 35789999999888854
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
|+..||.|+..- ..++++.++.||+.++ | +++++++..+|.||. +
T Consensus 627 -TI~yNIryak~~----------------------AsneevyaAAkAA~IH--------d---rIl~fPegY~t~VGE-R 671 (790)
T KOG0056|consen 627 -TILYNIRYAKPS----------------------ASNEEVYAAAKAAQIH--------D---RILQFPEGYNTRVGE-R 671 (790)
T ss_pred -eeeeheeecCCC----------------------CChHHHHHHHHHhhHH--------H---HHhcCchhhhhhhhh-c
Confidence 999999885211 0123444445554432 2 568899999999995 4
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
+-.|||||||||+|||+++..|.|++|||.||+||.+|.++|..+|.+++. ++|.|+.-|.- .+.-.+|.|+++++
T Consensus 672 GLkLSGGEKQRVAiARtiLK~P~iIlLDEATSALDT~tER~IQaaL~rlca--~RTtIVvAHRL--STivnAD~ILvi~~ 747 (790)
T KOG0056|consen 672 GLKLSGGEKQRVAIARTILKAPSIILLDEATSALDTNTERAIQAALARLCA--NRTTIVVAHRL--STIVNADLILVISN 747 (790)
T ss_pred ccccCCcchhhHHHHHHHhcCCcEEEEcchhhhcCCccHHHHHHHHHHHhc--CCceEEEeeee--hheecccEEEEEeC
Confidence 445999999999999999999999999999999999999999999999986 45656555543 45567999999999
Q ss_pred CeEEEecChhHHHH
Q 045902 422 GEIVYQGPREYVLD 435 (1472)
Q Consensus 422 G~iv~~G~~~~~~~ 435 (1472)
|+|++.|.++|++.
T Consensus 748 G~IvErG~HeeLl~ 761 (790)
T KOG0056|consen 748 GRIVERGRHEELLK 761 (790)
T ss_pred CeEeecCcHHHHHh
Confidence 99999999999875
No 373
>cd03298 ABC_ThiQ_thiamine_transporter ABC-type thiamine tranport system; part of the binding-protein-dependent transport system tbpA-thiPQ for thiamine and TPP. Probably responsible for the translocation of thiamine across the membrane. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.6e-33 Score=311.88 Aligned_cols=195 Identities=25% Similarity=0.381 Sum_probs=163.0
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCHHHHHH
Q 045902 191 DVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTVRETLD 269 (1472)
Q Consensus 191 ~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 269 (1472)
|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|.++....+ ++.++|++|++.+++.+||+||+.
T Consensus 16 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~enl~ 92 (211)
T cd03298 16 HFDLTFAQGEITAIVGPSGSGKSTLLNLIAGFETPQ---SGRVLINGVDVTAAPPADRPVSMLFQENNLFAHLTVEQNVG 92 (211)
T ss_pred ceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEEcCcCCHhHccEEEEecccccCCCCcHHHHHh
Confidence 999999999999999999999999999999999887 8999999998865432 357999999999999999999998
Q ss_pred HhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHH
Q 045902 270 FSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQ 349 (1472)
Q Consensus 270 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGq 349 (1472)
+....... . .+.. +...+.+++.+||++..++.+. .|||||
T Consensus 93 ~~~~~~~~-~--------~~~~-------------------------~~~~~~~l~~~~l~~~~~~~~~-----~LS~G~ 133 (211)
T cd03298 93 LGLSPGLK-L--------TAED-------------------------RQAIEVALARVGLAGLEKRLPG-----ELSGGE 133 (211)
T ss_pred cccccccC-c--------cHHH-------------------------HHHHHHHHHHcCCHHHHhCCcc-----cCCHHH
Confidence 75321100 0 0000 0113557888999877776664 599999
Q ss_pred HHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEec
Q 045902 350 KKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQG 428 (1472)
Q Consensus 350 rkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G 428 (1472)
|||++||++++.+|++++|||||+|||..++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|++++.|
T Consensus 134 ~qrv~ia~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sH~~-~~~~~~~d~i~~l~~G~i~~~~ 211 (211)
T cd03298 134 RQRVALARVLVRDKPVLLLDEPFAALDPALRAEMLDLVLDLHAETKMTVLMVTHQP-EDAKRLAQRVVFLDNGRIAAQG 211 (211)
T ss_pred HHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHhhhCEEEEEECCEEeecC
Confidence 99999999999999999999999999999999999999998765678888877664 4677889999999999998764
No 374
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=2.5e-33 Score=365.60 Aligned_cols=208 Identities=27% Similarity=0.360 Sum_probs=171.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|++|+||+.++|+||||||||||+++|+|.++|+ +|+|++||+++++..+ ++.++||+|++.+|+ .
T Consensus 487 ~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~p~---~G~I~idg~~i~~~~~~~lr~~i~~v~Q~~~lf~-g 562 (708)
T TIGR01193 487 SNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQAR---SGEILLNGFSLKDIDRHTLRQFINYLPQEPYIFS-G 562 (708)
T ss_pred CcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCCCC---CcEEEECCEEHHHcCHHHHHHheEEEecCceehh-H
Confidence 35899999999999999999999999999999999999998 9999999999987654 468999999998885 5
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||+|||.++.+.. .+++++.+..+.+.+ +..++ .++...||.+|+ .+
T Consensus 563 TI~eNi~l~~~~~---------------------~~~~~i~~a~~~a~l---------~~~i~--~lp~gldt~i~e-~G 609 (708)
T TIGR01193 563 SILENLLLGAKEN---------------------VSQDEIWAACEIAEI---------KDDIE--NMPLGYQTELSE-EG 609 (708)
T ss_pred HHHHHHhccCCCC---------------------CCHHHHHHHHHHhCC---------HHHHH--hcccccCcEecC-CC
Confidence 9999998752100 011122222222211 11222 356677999984 67
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
.+||||||||++||||++.+|++|+||||||+||+.++..+.+.|+++ .++|+|++.|.+ ++.+.+|+|++|++|
T Consensus 610 ~~LSgGQrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~---~~~T~IiitHr~--~~~~~~D~i~~l~~G 684 (708)
T TIGR01193 610 SSISGGQKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL---QDKTIIFVAHRL--SVAKQSDKIIVLDHG 684 (708)
T ss_pred CCCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh---cCCEEEEEecch--HHHHcCCEEEEEECC
Confidence 889999999999999999999999999999999999999999999874 368988888876 466889999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
++++.|+++++.+
T Consensus 685 ~i~~~G~~~~L~~ 697 (708)
T TIGR01193 685 KIIEQGSHDELLD 697 (708)
T ss_pred EEEEECCHHHHHh
Confidence 9999999998864
No 375
>PRK14260 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.4e-33 Score=320.66 Aligned_cols=214 Identities=23% Similarity=0.337 Sum_probs=170.9
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC-e--eEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG-Y--IEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~-~--~~G~i~i~G 953 (1472)
.+.++|+++.+. ++.+|+|+|+++++||+++|+|+||||||||+++|+|..++. + .+|+|.++|
T Consensus 7 ~l~~~~l~~~~~-------------~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLlk~l~Gl~~~~~~~~~~G~i~~~g 73 (259)
T PRK14260 7 AIKVKDLSFYYN-------------TSKAIEGISMDIYRNKVTAIIGPSGCGKSTFIKTLNRISELEGPVKVEGVVDFFG 73 (259)
T ss_pred eEEEEEEEEEEC-------------CeEeecceEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcCcccCCccceEEEECC
Confidence 466778776542 246999999999999999999999999999999999976532 2 489999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cc---hHHHHHHHHHcccccc-cccccCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PK---DMFVEEVMELVEMKAL-RNSLVGLPGVDG 1022 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~---~~~~~~v~~~l~l~~~-~~~~~~~~~~~~ 1022 (1472)
.++.. ...++.++|++|++.+++ .|+.||+.+....+. +. +..++++++.+++... .+.. ...+..
T Consensus 74 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~--~~~~~~ 150 (259)
T PRK14260 74 QNIYDPRININRLRRQIGMVFQRPNPFP-MSIYENVAYGVRISAKLPQADLDEIVESALKGAALWQEVKDKL--NKSALG 150 (259)
T ss_pred EeccccccchHhhhhheEEEecccccCC-ccHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHcCCcchhhhHh--cCCccc
Confidence 87532 234567999999998887 899999987654322 11 1345567777776321 1111 112457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEec----
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR---- 1098 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~---- 1098 (1472)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|++
T Consensus 151 LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~i~~~~d~i~~l~~~~~~ 228 (259)
T PRK14260 151 LSGGQQQRLCIARALAIKPKVLLMDEPCSALDPIATMKVEELIHSLRS-ELTIAIVTHNMQ-QATRVSDFTAFFSTDESR 228 (259)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhcCeEEEEeccCCC
Confidence 999999999999999999999999999999999999999999999865 699999999987 57788999999973
Q ss_pred CcEEEEEcCC
Q 045902 1099 GGHVIYAGPL 1108 (1472)
Q Consensus 1099 gg~v~~~g~~ 1108 (1472)
.|++++.|+.
T Consensus 229 ~G~i~~~~~~ 238 (259)
T PRK14260 229 IGQMVEFGVT 238 (259)
T ss_pred CceEEEeCCH
Confidence 4899999875
No 376
>PRK13645 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-33 Score=324.41 Aligned_cols=206 Identities=20% Similarity=0.299 Sum_probs=166.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCC----C----CCCceEEEEcCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTE----F----VPQRTCAYISQHDL 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~----~----~~~~~~~yv~Q~d~ 257 (1472)
..+|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 24 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~~~~i~~v~q~~~ 100 (289)
T PRK13645 24 FKALNNTSLTFKKNKVTCVIGTTGSGKSTMIQLTNGLIISE---TGQTIVGDYAIPANLKKIKEVKRLRKEIGLVFQFPE 100 (289)
T ss_pred cceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEccccccccccHHHHhccEEEEEeCcc
Confidence 35899999999999999999999999999999999999887 8999999998742 1 11357999999973
Q ss_pred -CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-ccccc
Q 045902 258 -HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADI 335 (1472)
Q Consensus 258 -~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt 335 (1472)
.+...||+||+.|.....+.. ..+ .. ..++.+++.+||+ +..++
T Consensus 101 ~~~~~~tv~enl~~~~~~~~~~----------~~~----------~~--------------~~~~~ll~~~~L~~~~~~~ 146 (289)
T PRK13645 101 YQLFQETIEKDIAFGPVNLGEN----------KQE----------AY--------------KKVPELLKLVQLPEDYVKR 146 (289)
T ss_pred hhhhhhHHHHHHHHHHHHcCCC----------HHH----------HH--------------HHHHHHHHHcCCChhHhcC
Confidence 233469999998754321110 000 00 0134567888884 56666
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
.++ .|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++.+..++|+|++.|++. ++.+++|+
T Consensus 147 ~~~-----~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiiiisH~~~-~~~~~~d~ 220 (289)
T PRK13645 147 SPF-----ELSGGQKRRVALAGIIAMDGNTLVLDEPTGGLDPKGEEDFINLFERLNKEYKKRIIMVTHNMD-QVLRIADE 220 (289)
T ss_pred Chh-----hCCHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCE
Confidence 554 499999999999999999999999999999999999999999999987655788888877654 67889999
Q ss_pred EEEecCCeEEEecChhHHH
Q 045902 416 IILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~ 434 (1472)
+++|++|++++.|+.+++.
T Consensus 221 i~~l~~G~i~~~g~~~~~~ 239 (289)
T PRK13645 221 VIVMHEGKVISIGSPFEIF 239 (289)
T ss_pred EEEEECCEEEEeCCHHHHh
Confidence 9999999999999987763
No 377
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5e-33 Score=321.36 Aligned_cols=216 Identities=22% Similarity=0.286 Sum_probs=170.8
Q ss_pred ceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEE
Q 045902 875 PLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISI 951 (1472)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i 951 (1472)
+..+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|...+. +.+|+|.+
T Consensus 18 ~~~l~~~nl~~~~~-------------~~~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~ 84 (274)
T PRK14265 18 HSVFEVEGVKVFYG-------------GFLALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLY 84 (274)
T ss_pred CceEEEeeEEEEeC-------------CeEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEE
Confidence 34678888877642 346999999999999999999999999999999999975421 24899999
Q ss_pred cCccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-C--chHHHHHHHHHccccc-ccccccCCCCCCC
Q 045902 952 SGYPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-P--KDMFVEEVMELVEMKA-LRNSLVGLPGVDG 1022 (1472)
Q Consensus 952 ~G~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~--~~~~~~~v~~~l~l~~-~~~~~~~~~~~~~ 1022 (1472)
+|.++.. ..+++.++|++|+..+++. |+.||+.+....+. . .+...++.++.+++.. +.+.. . ..+..
T Consensus 85 ~g~~l~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~-~~~~~ 161 (274)
T PRK14265 85 RDRNIYDSQINSVKLRRQVGMVFQRPNPFPK-SIYENIAFAPRANGYKGNLDELVEDSLRRAAIWEEVKDKL-K-EKGTA 161 (274)
T ss_pred CCEecccccchhHHHhhcEEEEccCCccccc-cHHHHHHhHHHhcCchHHHHHHHHHHHHHcccchhhHHHh-c-CCccc
Confidence 9987531 2345679999999888764 99999987643321 1 1223455666666532 11111 1 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEe-----
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK----- 1097 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~----- 1097 (1472)
|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|+
T Consensus 162 LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~~~~~ 239 (274)
T PRK14265 162 LSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE-QYTIIMVTHNMQ-QASRVADWTAFFNTEIDE 239 (274)
T ss_pred CCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEeccccc
Confidence 999999999999999999999999999999999999999999999975 799999999986 5778899999997
Q ss_pred ---cCcEEEEEcCC
Q 045902 1098 ---RGGHVIYAGPL 1108 (1472)
Q Consensus 1098 ---~gg~v~~~g~~ 1108 (1472)
+.|++++.|+.
T Consensus 240 ~~~~~G~~~~~g~~ 253 (274)
T PRK14265 240 YGKRRGKLVEFSPT 253 (274)
T ss_pred ccccCceEEEeCCH
Confidence 25899999986
No 378
>PRK14236 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.7e-33 Score=321.55 Aligned_cols=215 Identities=26% Similarity=0.324 Sum_probs=171.5
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---CeeEEEEEEc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GYIEGSISIS 952 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~ 952 (1472)
..+.++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|..++ .+.+|+|.++
T Consensus 24 ~~l~~~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~laGl~~~~~~~~~~G~i~i~ 90 (272)
T PRK14236 24 TALEVRNLNLFYG-------------DKQALFDISMRIPKNRVTAFIGPSGCGKSTLLRCFNRMNDLVDNCRIEGEIRLD 90 (272)
T ss_pred cEEEEEEEEEEEC-------------CeeEeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHHhcCCCccCCCCceEEEEC
Confidence 3577888877652 24699999999999999999999999999999999998652 1358999999
Q ss_pred CccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cc---hHHHHHHHHHcccccccccccCCCCCCC
Q 045902 953 GYPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PK---DMFVEEVMELVEMKALRNSLVGLPGVDG 1022 (1472)
Q Consensus 953 G~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~ 1022 (1472)
|.+... ..+++.++|++|++.+++. |++||+.+...... .. +..++++++.+++.......... ....
T Consensus 91 g~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~ 168 (272)
T PRK14236 91 GQNIYDKKVDVAELRRRVGMVFQRPNPFPK-SIYENVVYGLRLQGINNRRVLDEAVERSLRGAALWDEVKDRLHE-NAFG 168 (272)
T ss_pred CEECcccccCHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCChhHHHHhhC-Cccc
Confidence 987632 2345679999999988876 99999987644321 11 13356667777764311111111 2357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|||++||+++ ++.+.+|++++|++ |++
T Consensus 169 LS~Gq~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~~~~~~d~i~~l~~-G~i 245 (272)
T PRK14236 169 LSGGQQQRLVIARAIAIEPEVLLLDEPTSALDPISTLKIEELITELKS-KYTIVIVTHNMQ-QAARVSDYTAFMYM-GKL 245 (272)
T ss_pred CCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCeEEEEeCCHH-HHHhhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999975 799999999976 46778999999985 789
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
+..|+.
T Consensus 246 ~~~g~~ 251 (272)
T PRK14236 246 VEYGDT 251 (272)
T ss_pred EecCCH
Confidence 888875
No 379
>COG0444 DppD ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component [Amino acid transport and metabolism / Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.5e-33 Score=313.51 Aligned_cols=204 Identities=25% Similarity=0.386 Sum_probs=164.9
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC-C-C-eeEEEEEEcCccC---Chhc----ccceeEEeccC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT-G-G-YIEGSISISGYPK---KQET----FARISGYCEQN 971 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~-~-~-~~~G~i~i~G~~~---~~~~----~~~~~gyv~Q~ 971 (1472)
..++++||||++++||++||+|.||||||||.++|.|.++ + + ..+|+|.++|.++ +++. +-+.++|++|+
T Consensus 17 ~v~av~~vs~~i~~GE~lgiVGESGsGKS~~~~aim~llp~~~~~i~~G~i~f~g~~l~~l~~~~~~~iRG~~I~mIfQ~ 96 (316)
T COG0444 17 VVKAVDGVSFELKKGEILGIVGESGSGKSVLAKAIMGLLPKPNARIVGGEILFDGKDLLSLSEKELRKIRGKEIAMIFQD 96 (316)
T ss_pred cEEEEeceeEEEcCCcEEEEEcCCCCCHHHHHHHHHhccCCCCCeEeeeEEEECCcccccCCHHHHHhhcCceEEEEEcC
Confidence 3579999999999999999999999999999999999876 2 2 4678999999864 2222 23579999999
Q ss_pred C--CCCCCCCHHHHHHHHHHcCC---CchHHHHHHHHHcccccccc---cccCCCCCCCCCHHHHHHHHHHHHHhhCCCC
Q 045902 972 D--IHSPNVTIYESLLYSAWLRL---PKDMFVEEVMELVEMKALRN---SLVGLPGVDGLSTEQRKRLTIAVELVANPSI 1043 (1472)
Q Consensus 972 ~--~~~~~lTv~e~l~~~~~l~~---~~~~~~~~v~~~l~l~~~~~---~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~i 1043 (1472)
+ .+.|.+||.+.+.-...... ..++..+++.+.|+..++.+ .....| ..|||||||||.||.||+.+|++
T Consensus 97 p~~sLnPv~~Ig~Qi~E~l~~h~~~~~~~ea~~~a~~~L~~Vgi~~~~~~~~~YP--helSGGMrQRV~IAmala~~P~L 174 (316)
T COG0444 97 PMTSLNPVMTIGDQIAEVLRLHGKGLSKKEAKERAIELLELVGIPDPERRLKSYP--HELSGGMRQRVMIAMALALNPKL 174 (316)
T ss_pred chhhcCChhhHHHHHHHHHHHhhcchhhHHHHHHHHHHHHHcCCCCHHHHHhhCC--cccCCcHHHHHHHHHHHhCCCCE
Confidence 7 46788999888765554332 12233344444444444443 333344 58999999999999999999999
Q ss_pred ccccCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1044 IFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1044 l~LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
||.||||++||...+++|+++|+++.+ .|.|+|++|||+.. +.+.||||.||.. |++++.|+..
T Consensus 175 lIADEPTTALDvt~QaqIl~Ll~~l~~e~~~aiilITHDl~v-va~~aDri~VMYa-G~iVE~g~~~ 239 (316)
T COG0444 175 LIADEPTTALDVTVQAQILDLLKELQREKGTALILITHDLGV-VAEIADRVAVMYA-GRIVEEGPVE 239 (316)
T ss_pred EEeCCCcchhhHHHHHHHHHHHHHHHHhcCCEEEEEeCCHHH-HHHhcceEEEEEC-cEEEEeCCHH
Confidence 999999999999999999999999986 59999999999874 8889999999985 8999999963
No 380
>PRK13644 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=3.1e-33 Score=323.01 Aligned_cols=203 Identities=25% Similarity=0.349 Sum_probs=169.5
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC----CceEEEEcCCCC-CCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP----QRTCAYISQHDL-HHGE 261 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~----~~~~~yv~Q~d~-~~~~ 261 (1472)
.+|+|+|++|++||+++|+|||||||||||++|+|.++++ +|+|.++|.++....+ ++.++|++|++. .++.
T Consensus 16 ~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (274)
T PRK13644 16 PALENINLVIKKGEYIGIIGKNGSGKSTLALHLNGLLRPQ---KGKVLVSGIDTGDFSKLQGIRKLVGIVFQNPETQFVG 92 (274)
T ss_pred ceeeeeEEEEeCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEECCccccHHHHHhheEEEEEChhhhccc
Confidence 5999999999999999999999999999999999999887 8999999998865432 357999999975 4667
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||.||+.|.....+.. ..+ .+ ..++.+++.+||++..++.++
T Consensus 93 ~tv~enl~~~~~~~~~~----------~~~----------~~--------------~~~~~~l~~~gl~~~~~~~~~--- 135 (274)
T PRK13644 93 RTVEEDLAFGPENLCLP----------PIE----------IR--------------KRVDRALAEIGLEKYRHRSPK--- 135 (274)
T ss_pred chHHHHHHhhHHHcCCC----------HHH----------HH--------------HHHHHHHHHCCCHHHhcCCcc---
Confidence 89999998764322110 000 00 013557888999888777665
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++. ++ ..+|++++|++
T Consensus 136 --~LS~G~~qrv~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~l~~-~g~til~~tH~~~-~~-~~~d~v~~l~~ 210 (274)
T PRK13644 136 --TLSGGQGQCVALAGILTMEPECLIFDEVTSMLDPDSGIAVLERIKKLHE-KGKTIVYITHNLE-EL-HDADRIIVMDR 210 (274)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-CCCEEEEEecCHH-HH-hhCCEEEEEEC
Confidence 4999999999999999999999999999999999999999999999875 5889999888765 45 56999999999
Q ss_pred CeEEEecChhHHH
Q 045902 422 GEIVYQGPREYVL 434 (1472)
Q Consensus 422 G~iv~~G~~~~~~ 434 (1472)
|++++.|+.+++.
T Consensus 211 G~i~~~g~~~~~~ 223 (274)
T PRK13644 211 GKIVLEGEPENVL 223 (274)
T ss_pred CEEEEECCHHHHh
Confidence 9999999988763
No 381
>PRK14258 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.8e-33 Score=319.66 Aligned_cols=216 Identities=23% Similarity=0.324 Sum_probs=172.4
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G 953 (1472)
.+.++|+++.+. +..+|+|+||++++||++||+|+||||||||+++|+|..++. ..+|+|.++|
T Consensus 7 ~l~~~nl~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~g~i~~~G~i~~~g 73 (261)
T PRK14258 7 AIKVNNLSFYYD-------------TQKILEGVSMEIYQSKVTAIIGPSGCGKSTFLKCLNRMNELESEVRVEGRVEFFN 73 (261)
T ss_pred eEEEeeEEEEeC-------------CeeEeeceEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCccccceEEECC
Confidence 467888876642 236999999999999999999999999999999999986632 1379999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cc---hHHHHHHHHHcccccccccccCCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PK---DMFVEEVMELVEMKALRNSLVGLPGVDGL 1023 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~L 1023 (1472)
.++.. ...++.++|++|+..+++ .|+.||+.+...... +. ...++++++.+++.+..+..... .+..|
T Consensus 74 ~~i~~~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~L 151 (261)
T PRK14258 74 QNIYERRVNLNRLRRQVSMVHPKPNLFP-MSVYDNVAYGVKIVGWRPKLEIDDIVESALKDADLWDEIKHKIHK-SALDL 151 (261)
T ss_pred EEhhccccchHHhhccEEEEecCCccCc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchhhhHhcC-CcccC
Confidence 87521 234567899999988887 899999987643321 11 13456677777764321112221 23579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecC---
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRG--- 1099 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~g--- 1099 (1472)
|||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ .|+|||++||+++ ++.+.+|++++|+++
T Consensus 152 SgGq~qrv~laral~~~p~vllLDEP~~~LD~~~~~~l~~~l~~l~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~~~~~ 230 (261)
T PRK14258 152 SGGQQQRLCIARALAVKPKVLLMDEPCFGLDPIASMKVESLIQSLRLRSELTMVIVSHNLH-QVSRLSDFTAFFKGNENR 230 (261)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHHhCCCEEEEEECCHH-HHHHhcCEEEEEccCCCc
Confidence 99999999999999999999999999999999999999999999865 4899999999986 577899999999863
Q ss_pred -cEEEEEcCC
Q 045902 1100 -GHVIYAGPL 1108 (1472)
Q Consensus 1100 -g~v~~~g~~ 1108 (1472)
|++++.|+.
T Consensus 231 ~G~i~~~~~~ 240 (261)
T PRK14258 231 IGQLVEFGLT 240 (261)
T ss_pred CceEEEeCCH
Confidence 789999875
No 382
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-33 Score=317.94 Aligned_cols=214 Identities=24% Similarity=0.342 Sum_probs=168.0
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCe---eEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGY---IEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~---~~G~i~i~G 953 (1472)
.+.++|+++.+ +++.+|+|+||+|++||+++|+||||||||||+++|+|..++.+ .+|+|.++|
T Consensus 4 ~l~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g 70 (252)
T PRK14272 4 LLSAQDVNIYY-------------GDKQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDG 70 (252)
T ss_pred EEEEeeeEEEE-------------CCEEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECC
Confidence 45667776554 23469999999999999999999999999999999999865422 379999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC-CCch----HHHHHHHHHccccc-ccccccCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR-LPKD----MFVEEVMELVEMKA-LRNSLVGLPGVDG 1022 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-~~~~----~~~~~v~~~l~l~~-~~~~~~~~~~~~~ 1022 (1472)
.++.. ..+++.++|++|++.+++.+|+.||+.+..... .... +..+++++.+++.. +.+.. . ..+..
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t~~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~-~~~~~ 148 (252)
T PRK14272 71 QDIYGPRVDPVAMRRRVGMVFQKPNPFPTMSVFDNVVAGLKLAGIRDRDHLMEVAERSLRGAALWDEVKDRL-K-TPATG 148 (252)
T ss_pred EEcccCccCHHHhhceeEEEeccCccCcCCCHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCcchhhhhhh-c-CCccc
Confidence 87632 234567899999999999999999998754322 1111 22334455555431 11111 1 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|++ |++
T Consensus 149 LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i 225 (252)
T PRK14272 149 LSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK-VTTIIIVTHNMH-QAARVSDTTSFFLV-GDL 225 (252)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999964 799999999976 46778999999986 788
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
++.|+.
T Consensus 226 ~~~~~~ 231 (252)
T PRK14272 226 VEHGPT 231 (252)
T ss_pred EEeCCH
Confidence 888875
No 383
>TIGR01189 ccmA heme ABC exporter, ATP-binding protein CcmA. This model describes the cyt c biogenesis protein encoded by ccmA in bacteria. An exception is, an arabidopsis protein. Quite likely this is encoded by an organelle. Bacterial c-type cytocromes are located on the periplasmic side of the cytoplasmic membrane. Several gene products encoded in a locus designated as 'ccm' are implicated in the transport and assembly of the functional cytochrome C. This cluster includes genes: ccmA;B;C;D;E;F;G and H. The posttranslational pathway includes the transport of heme moiety, the secretion of the apoprotein and the covalent attachment of the heme with the apoprotein. The proteins ccmA and B represent an ABC transporter; ccmC and D participate in heme transfer to ccmE, which function as a periplasmic heme chaperone. The presence of ccmF, G and H is suggested to be obligatory for the final functional assembly of cytochrome c.
Probab=100.00 E-value=2.1e-33 Score=309.37 Aligned_cols=183 Identities=23% Similarity=0.285 Sum_probs=154.1
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.+|
T Consensus 12 ~~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~t 89 (198)
T TIGR01189 12 ERMLFEGLSFTLNAGEALQVTGPNGIGKTTLLRILAGLLR--PDSGEVRWNGTALAEQRDEPHRNILYLGHLPGLKPELS 89 (198)
T ss_pred CEEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCccEEEECCEEcccchHHhhhheEEeccCcccccCCc
Confidence 3579999999999999999999999999999999999876 358999999987532 234567899999988888899
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHH
Q 045902 980 IYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAA 1059 (1472)
Q Consensus 980 v~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~ 1059 (1472)
+.|++.+....+...+..++++++.+++.+..++.+ ..||||||||++||++|+.+|++|+|||||+|||+.++.
T Consensus 90 v~~~l~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~ 164 (198)
T TIGR01189 90 ALENLHFWAAIHGGAQRTIEDALAAVGLTGFEDLPA-----AQLSAGQQRRLALARLWLSRAPLWILDEPTTALDKAGVA 164 (198)
T ss_pred HHHHHHHHHHHcCCcHHHHHHHHHHcCCHHHhcCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHH
Confidence 999998765443333345778888888877666543 479999999999999999999999999999999999999
Q ss_pred HHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEE
Q 045902 1060 IVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF 1094 (1472)
Q Consensus 1060 ~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~ 1094 (1472)
.+++.|++++++|.|||+++|++.. -.+++++
T Consensus 165 ~l~~~l~~~~~~~~tii~~sH~~~~---~~~~~~~ 196 (198)
T TIGR01189 165 LLAGLLRAHLARGGIVLLTTHQDLG---LVEAREL 196 (198)
T ss_pred HHHHHHHHHHhCCCEEEEEEccccc---ccceEEe
Confidence 9999999998789999999998742 2345554
No 384
>TIGR03797 NHPM_micro_ABC2 NHPM bacteriocin system ABC transporter, ATP-binding protein. Members of this protein family are ABC transporter ATP-binding subunits, part of a three-gene putative bacteriocin transport operon. The other subunits include another ATP-binding subunit (TIGR03796), which has an N-terminal propeptide cleavage domain, and an HlyD homolog (TIGR03794). In a number of genomes, a conserved propeptide sequence with a classic Gly-Gly motif
Probab=100.00 E-value=1.2e-33 Score=367.39 Aligned_cols=208 Identities=29% Similarity=0.360 Sum_probs=176.3
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|++|.++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 451 ~I~~~nvsf~Y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~--p~~G~I~idg~~i 517 (686)
T TIGR03797 451 AIEVDRVTFRYRP-----------DGPLILDDVSLQIEPGEFVAIVGPSGSGKSTLLRLLLGFET--PESGSVFYDGQDL 517 (686)
T ss_pred eEEEEEEEEEcCC-----------CCccceeeeEEEECCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEEc
Confidence 5889999988731 23569999999999999999999999999999999999987 4589999999986
Q ss_pred C---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc-------ccccCCCCCCCCCHH
Q 045902 957 K---QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR-------NSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 957 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~-------~~~~~~~~~~~LSgG 1026 (1472)
. ...+++.+|||+|++.+++ -|++||+.+... ..++.+.++++..++.+.. |+.+|.. ..+||||
T Consensus 518 ~~~~~~~lr~~i~~v~Q~~~lf~-gTI~eNi~~~~~---~~~e~i~~al~~a~l~~~i~~lp~G~dt~ige~-G~~LSGG 592 (686)
T TIGR03797 518 AGLDVQAVRRQLGVVLQNGRLMS-GSIFENIAGGAP---LTLDEAWEAARMAGLAEDIRAMPMGMHTVISEG-GGTLSGG 592 (686)
T ss_pred CcCCHHHHHhccEEEccCCccCc-ccHHHHHhcCCC---CCHHHHHHHHHHcCcHHHHHhccccccccccCC-CCCCCHH
Confidence 4 3567888999999999886 499999987532 3345667777777776543 4445543 3579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||++|||||+++|+||+||||||+||+.+++.+++.|+++ ++|+|+++|+++ ..+.+|++++|++ |+++..|
T Consensus 593 QrQRialARAll~~p~iLiLDEpTS~LD~~te~~i~~~L~~~---~~T~IiItHr~~--~i~~~D~Iivl~~-G~iv~~G 666 (686)
T TIGR03797 593 QRQRLLIARALVRKPRILLFDEATSALDNRTQAIVSESLERL---KVTRIVIAHRLS--TIRNADRIYVLDA-GRVVQQG 666 (686)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHh---CCeEEEEecChH--HHHcCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999886 589999999975 5678999999985 7999999
Q ss_pred CC
Q 045902 1107 PL 1108 (1472)
Q Consensus 1107 ~~ 1108 (1472)
+.
T Consensus 667 ~~ 668 (686)
T TIGR03797 667 TY 668 (686)
T ss_pred CH
Confidence 84
No 385
>cd03299 ABC_ModC_like Archeal protein closely related to ModC. ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=5.3e-33 Score=314.40 Aligned_cols=204 Identities=26% Similarity=0.406 Sum_probs=172.2
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCHHH
Q 045902 188 ILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTVRE 266 (1472)
Q Consensus 188 iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E 266 (1472)
+|+|+|++++|||+++|+||||||||||+++|+|.++++ +|+|.++|.++..... ++.++|++|++.+++.+||+|
T Consensus 14 ~l~~is~~i~~Ge~~~i~G~nG~GKStLl~~l~G~~~p~---~G~v~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~~e 90 (235)
T cd03299 14 KLKNVSLEVERGDYFVILGPTGSGKSVLLETIAGFIKPD---SGKILLNGKDITNLPPEKRDISYVPQNYALFPHMTVYK 90 (235)
T ss_pred eeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---ceEEEECCEEcCcCChhHcCEEEEeecCccCCCccHHH
Confidence 799999999999999999999999999999999999987 8999999998865432 357999999999999999999
Q ss_pred HHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCC
Q 045902 267 TLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGIS 346 (1472)
Q Consensus 267 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLS 346 (1472)
|+.+.....+.. . .+.+ ..++.+++.+||.+..++.+.+ ||
T Consensus 91 ~l~~~~~~~~~~----------~----------~~~~--------------~~~~~~l~~~~l~~~~~~~~~~-----LS 131 (235)
T cd03299 91 NIAYGLKKRKVD----------K----------KEIE--------------RKVLEIAEMLGIDHLLNRKPET-----LS 131 (235)
T ss_pred HHHHHHHHcCCC----------H----------HHHH--------------HHHHHHHHHcCChhHHhcCccc-----CC
Confidence 998754221100 0 0000 0124567888998777776654 99
Q ss_pred hHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEE
Q 045902 347 GGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVY 426 (1472)
Q Consensus 347 GGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~ 426 (1472)
|||||||+||+|++.+|++++|||||+|||..++..+.+.|++++...+.|++++.|++ +++.+++|++++|++|++++
T Consensus 132 ~G~~qrl~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~~~~~~~~tili~tH~~-~~~~~~~d~i~~l~~G~i~~ 210 (235)
T cd03299 132 GGEQQRVAIARALVVNPKILLLDEPFSALDVRTKEKLREELKKIRKEFGVTVLHVTHDF-EEAWALADKVAIMLNGKLIQ 210 (235)
T ss_pred HHHHHHHHHHHHHHcCCCEEEECCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEecCH-HHHHHhCCEEEEEECCEEEE
Confidence 99999999999999999999999999999999999999999998765588999988876 46788999999999999999
Q ss_pred ecChhHHH
Q 045902 427 QGPREYVL 434 (1472)
Q Consensus 427 ~G~~~~~~ 434 (1472)
.|+.+++.
T Consensus 211 ~~~~~~~~ 218 (235)
T cd03299 211 VGKPEEVF 218 (235)
T ss_pred ecCHHHHH
Confidence 99987664
No 386
>cd03230 ABC_DR_subfamily_A This family of ATP-binding proteins belongs to a multisubunit transporter involved in drug resistance (BcrA and DrrA), nodulation, lipid transport, and lantibiotic immunity. In bacteria and archaea, these transporters usually include an ATP-binding protein and one or two integral membrane proteins. Eukaryote systems of the ABCA subfamily display ABC domains that are quite similar to this family. The ATP-binding domain shows the highest similarity between all members of the ABC transporter family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-33 Score=301.97 Aligned_cols=157 Identities=30% Similarity=0.458 Sum_probs=142.1
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCCH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
..+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++..|+
T Consensus 13 ~~~l~~~~~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 90 (173)
T cd03230 13 KTALDDISLTVEKGEIYGLLGPNGAGKTTLIKIILGLLK--PDSGEIKVLGKDIKKEPEEVKRRIGYLPEEPSLYENLTV 90 (173)
T ss_pred eeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEcccchHhhhccEEEEecCCccccCCcH
Confidence 469999999999999999999999999999999999876 358999999987543 2345678999999988888999
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHH
Q 045902 981 YESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1060 (1472)
Q Consensus 981 ~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~ 1060 (1472)
.|++. ||||||||++||++|+.+|++|+|||||+|||+.++..
T Consensus 91 ~~~~~-------------------------------------LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~~~ 133 (173)
T cd03230 91 RENLK-------------------------------------LSGGMKQRLALAQALLHDPELLILDEPTSGLDPESRRE 133 (173)
T ss_pred HHHhh-------------------------------------cCHHHHHHHHHHHHHHcCCCEEEEeCCccCCCHHHHHH
Confidence 99973 89999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1061 VMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1061 i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
+.+.|++++++|.|||+++|+++ ++.+.+|++++|++|
T Consensus 134 l~~~l~~~~~~g~tiii~th~~~-~~~~~~d~i~~l~~g 171 (173)
T cd03230 134 FWELLRELKKEGKTILLSSHILE-EAERLCDRVAILNNG 171 (173)
T ss_pred HHHHHHHHHHCCCEEEEECCCHH-HHHHhCCEEEEEeCC
Confidence 99999999877899999999976 466789999999864
No 387
>PRK14247 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.8e-33 Score=317.32 Aligned_cols=209 Identities=24% Similarity=0.334 Sum_probs=167.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCeeCCCCC---CCceEEEEcCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS--LRVSGRVTYCGHELTEFV---PQRTCAYISQHDLHHG 260 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~~~~ 260 (1472)
+.+|+|+|+.+++||+++|+||||||||||+++|+|.+++. ...+|+|.++|.++.... .++.++|++|++.+++
T Consensus 16 ~~~l~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~ 95 (250)
T PRK14247 16 VEVLDGVNLEIPDNTITALMGPSGSGKSTLLRVFNRLIELYPEARVSGEVYLDGQDIFKMDVIELRRRVQMVFQIPNPIP 95 (250)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCCCCCCceEEEECCEECCcCCHHHHhccEEEEeccCccCC
Confidence 35899999999999999999999999999999999998641 113899999999876532 2357999999998899
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc----ccccc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI----CADIM 336 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt~ 336 (1472)
.+||+||+.+..+....... . .+. ...++.+++.+||.+ ..|+.
T Consensus 96 ~~tv~enl~~~~~~~~~~~~--------~----------~~~--------------~~~~~~~l~~~~l~~~~~~~~~~~ 143 (250)
T PRK14247 96 NLSIFENVALGLKLNRLVKS--------K----------KEL--------------QERVRWALEKAQLWDEVKDRLDAP 143 (250)
T ss_pred CCcHHHHHHHHHHhccccCC--------H----------HHH--------------HHHHHHHHHHcCCCcchhhhhcCC
Confidence 99999999886432110000 0 000 001345677888753 34444
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 337 VGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 337 vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
+ ..|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++. ++.+++|++
T Consensus 144 ~-----~~LSgG~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~~-~~~~~~d~i 215 (250)
T PRK14247 144 A-----GKLSGGQQQRLCIARALAFQPEVLLADEPTANLDPENTAKIESLFLELKK--DMTIVLVTHFPQ-QAARISDYV 215 (250)
T ss_pred c-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCHH-HHHHhcCEE
Confidence 4 45999999999999999999999999999999999999999999999853 678888877654 677899999
Q ss_pred EEecCCeEEEecChhHHH
Q 045902 417 ILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~~ 434 (1472)
++|++|++++.|+.+++.
T Consensus 216 ~~l~~G~i~~~g~~~~~~ 233 (250)
T PRK14247 216 AFLYKGQIVEWGPTREVF 233 (250)
T ss_pred EEEECCeEEEECCHHHHH
Confidence 999999999999988763
No 388
>COG4525 TauB ABC-type taurine transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=4.6e-33 Score=285.83 Aligned_cols=206 Identities=24% Similarity=0.356 Sum_probs=176.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCCHH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMTVR 265 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lTV~ 265 (1472)
..+|+|+|+.|.+||.++++||||||||||||+++|..+|. .|+|.+||.+++. |...-|.|+|+|.++|.+||.
T Consensus 18 ~~~le~vsL~ia~ge~vv~lGpSGcGKTTLLnl~AGf~~P~---~G~i~l~~r~i~g--PgaergvVFQ~~~LlPWl~~~ 92 (259)
T COG4525 18 RSALEDVSLTIASGELVVVLGPSGCGKTTLLNLIAGFVTPS---RGSIQLNGRRIEG--PGAERGVVFQNEALLPWLNVI 92 (259)
T ss_pred hhhhhccceeecCCCEEEEEcCCCccHHHHHHHHhcCcCcc---cceEEECCEeccC--CCccceeEeccCccchhhHHH
Confidence 56999999999999999999999999999999999999998 8999999998875 344458999999999999999
Q ss_pred HHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCC
Q 045902 266 ETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGI 345 (1472)
Q Consensus 266 E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gL 345 (1472)
||++|+.++.|..... +++ .....+...||+...+..+- .|
T Consensus 93 dNvafgL~l~Gi~k~~-------R~~---------------------------~a~q~l~~VgL~~~~~~~i~-----qL 133 (259)
T COG4525 93 DNVAFGLQLRGIEKAQ-------RRE---------------------------IAHQMLALVGLEGAEHKYIW-----QL 133 (259)
T ss_pred HHHHHHHHhcCCCHHH-------HHH---------------------------HHHHHHHHhCcccccccceE-----ee
Confidence 9999999988764321 111 23457888899987776654 49
Q ss_pred ChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec--CCe
Q 045902 346 SGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS--EGE 423 (1472)
Q Consensus 346 SGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~--~G~ 423 (1472)
||||||||.|||||..+|+.|+||||+.+||.-|+.++.+.|-++.+..|+.++++.| .-+|..-+++++++|+ .|+
T Consensus 134 SGGmrQRvGiARALa~eP~~LlLDEPfgAlDa~tRe~mQelLldlw~~tgk~~lliTH-~ieEAlflatrLvvlsp~pgR 212 (259)
T COG4525 134 SGGMRQRVGIARALAVEPQLLLLDEPFGALDALTREQMQELLLDLWQETGKQVLLITH-DIEEALFLATRLVVLSPGPGR 212 (259)
T ss_pred cchHHHHHHHHHHhhcCcceEeecCchhhHHHHHHHHHHHHHHHHHHHhCCeEEEEec-cHHHHHhhhheeEEecCCCce
Confidence 9999999999999999999999999999999999999999999998888888877665 5667778999999997 479
Q ss_pred EEEecChhHHHHH
Q 045902 424 IVYQGPREYVLDF 436 (1472)
Q Consensus 424 iv~~G~~~~~~~~ 436 (1472)
|+..=+.+-...|
T Consensus 213 vv~~~~~df~rR~ 225 (259)
T COG4525 213 VVERLPLDFARRY 225 (259)
T ss_pred eeEecCCCHHHHh
Confidence 9987776544433
No 389
>cd03225 ABC_cobalt_CbiO_domain1 Domain I of the ABC component of a cobalt transport family found in bacteria, archaea, and eukaryota. The transition metal cobalt is an essential component of many enzymes and must be transported into cells in appropriate amounts when needed. This ABC transport system of the CbiMNQO family is involved in cobalt transport in association with the cobalamin (vitamin B12) biosynthetic pathways. Most of cobalt (Cbi) transport systems possess a separate CbiN component, the cobalt-binding periplasmic protein, and they are encoded by the conserved gene cluster cbiMNQO. Both the CbiM and CbiQ proteins are integral cytoplasmic membrane proteins, and the CbiO protein has the linker peptide and the Walker A and B motifs commonly found in the ATPase components of the ABC-type transport systems.
Probab=100.00 E-value=2.5e-33 Score=312.08 Aligned_cols=194 Identities=30% Similarity=0.423 Sum_probs=159.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCC-CCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDL-HHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~-~~~~ 261 (1472)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|++. .++.
T Consensus 14 ~~il~~vs~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (211)
T cd03225 14 RPALDDISLTIKKGEFVLIVGPNGSGKSTLLRLLNGLLGPT---SGEVLVDGKDLTKLSLKELRRKVGLVFQNPDDQFFG 90 (211)
T ss_pred eeeecceEEEEcCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEEcccCCHHHHHhhceEEecChhhhcCC
Confidence 46999999999999999999999999999999999999887 8999999998765322 357999999974 4678
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
+||+||+.+.....+.. .. +. ....+.+++.+||++..++.++
T Consensus 91 ~t~~~~l~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~--- 133 (211)
T cd03225 91 PTVEEEVAFGLENLGLP----------EE----------EI--------------EERVEEALELVGLEGLRDRSPF--- 133 (211)
T ss_pred CcHHHHHHHHHHHcCCC----------HH----------HH--------------HHHHHHHHHHcCcHhhhcCCcc---
Confidence 99999998754321100 00 00 0013457888999877776665
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
.|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++. +.|+|++.|++ .++.+++|+|++|++
T Consensus 134 --~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~-~~tvi~~sH~~-~~~~~~~d~i~~l~~ 209 (211)
T cd03225 134 --TLSGGQKQRVAIAGVLAMDPDILLLDEPTAGLDPAGRRELLELLKKLKAE-GKTIIIVTHDL-DLLLELADRVIVLED 209 (211)
T ss_pred --cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHc-CCEEEEEeCCH-HHHHHhCCEEEEEeC
Confidence 49999999999999999999999999999999999999999999998764 78888888765 477788999999999
Q ss_pred Ce
Q 045902 422 GE 423 (1472)
Q Consensus 422 G~ 423 (1472)
|+
T Consensus 210 G~ 211 (211)
T cd03225 210 GK 211 (211)
T ss_pred CC
Confidence 85
No 390
>PRK10762 D-ribose transporter ATP binding protein; Provisional
Probab=100.00 E-value=1.8e-33 Score=352.61 Aligned_cols=211 Identities=26% Similarity=0.351 Sum_probs=176.5
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+ +++.+|+|+||+|++||++||+|||||||||||++|+|..++ .+|+|.++|.+..
T Consensus 5 i~~~~l~~~~-------------~~~~~l~~is~~i~~Ge~~~l~G~NGsGKSTLl~~l~G~~~p--~~G~i~~~g~~~~ 69 (501)
T PRK10762 5 LQLKGIDKAF-------------PGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTR--DAGSILYLGKEVT 69 (501)
T ss_pred EEEeeeEEEe-------------CCeEEeeeeeEEEcCCeEEEEECCCCCCHHHHHHHHhCCCCC--CCcEEEECCEECC
Confidence 5677776654 235699999999999999999999999999999999998763 4899999998753
Q ss_pred h---h-cccceeEEeccCCCCCCCCCHHHHHHHHHHcC-----CCc---hHHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 958 Q---E-TFARISGYCEQNDIHSPNVTIYESLLYSAWLR-----LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 958 ~---~-~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-----~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
. . ..++.++|++|++.+++.+||+|++.+....+ .+. ...++++++.+++.+..+..+ ..|||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSg 144 (501)
T PRK10762 70 FNGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGRIDWKKMYAEADKLLARLNLRFSSDKLV-----GELSI 144 (501)
T ss_pred CCCHHHHHhCCEEEEEcchhccCCCcHHHHhhhccccccccCccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCH
Confidence 2 1 12456899999998999999999998764321 111 134677888888877666554 47999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
||||||+||+||+.+|++|+|||||+|||+.++..+++.|+++++.|.|||++||+++ ++.+.||++++|.+ |+++..
T Consensus 145 G~~qrv~la~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~~~tvii~sHd~~-~~~~~~d~i~~l~~-G~i~~~ 222 (501)
T PRK10762 145 GEQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYISHRLK-EIFEICDDVTVFRD-GQFIAE 222 (501)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEEeC-CEEEEe
Confidence 9999999999999999999999999999999999999999999877999999999976 47788999999985 788888
Q ss_pred cCCCc
Q 045902 1106 GPLGR 1110 (1472)
Q Consensus 1106 g~~~~ 1110 (1472)
|+..+
T Consensus 223 ~~~~~ 227 (501)
T PRK10762 223 REVAD 227 (501)
T ss_pred cCcCc
Confidence 88754
No 391
>PRK14257 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.1e-33 Score=327.58 Aligned_cols=216 Identities=21% Similarity=0.290 Sum_probs=172.4
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---CeeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GYIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~G 953 (1472)
.+.++|+++.+.. +...+|+|||++|++||++||+||||||||||+++|+|.... .+.+|+|.++|
T Consensus 80 ~i~~~nls~~y~~-----------~~~~~L~~is~~I~~Ge~v~IvG~~GsGKSTLl~~L~g~~~~~~~~p~~G~I~idG 148 (329)
T PRK14257 80 VFEIRNFNFWYMN-----------RTKHVLHDLNLDIKRNKVTAFIGPSGCGKSTFLRNLNQLNDLIEGTSHEGEIYFLG 148 (329)
T ss_pred eEEEEeeEEEecC-----------CCceeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 5778888776531 224699999999999999999999999999999999997642 23589999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC-CCchH----HHHHHHHHcccccccccccCCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR-LPKDM----FVEEVMELVEMKALRNSLVGLPGVDGL 1023 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-~~~~~----~~~~v~~~l~l~~~~~~~~~~~~~~~L 1023 (1472)
.++.. ...++.++||+|++.+++ .|++||+.|..... ....+ .++++++.+++.+-.+..++.. ...|
T Consensus 149 ~~i~~~~~~~~~lr~~i~~v~q~~~~~~-~ti~eNi~~~~~~~~~~~~~~~~~~~~~~l~~~~L~~~l~~~~~~~-~~~L 226 (329)
T PRK14257 149 TNTRSKKISSLELRTRIGMVFQKPTPFE-MSIFDNVAYGPRNNGINDRKILEKIVEKSLKSAALWDEVKDDLDKA-GNAL 226 (329)
T ss_pred EEccccccchHhhhccEEEEecCCccCC-CcHHHHHHhHHHhcCCChHHHHHHHHHHHHHHcCCcchhhhhhhCC-cccC
Confidence 98742 234667999999998875 79999999865332 11111 2456677777643222233332 4589
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
|||||||++|||||+.+|+||+|||||+|||+.+...+.+.|+++++ ++|||++||+++ .+.+.+|++++|++ |+++
T Consensus 227 SgGqkqRl~LARAl~~~p~IlLLDEPts~LD~~~~~~i~~~i~~l~~-~~Tii~iTH~l~-~i~~~~Driivl~~-G~i~ 303 (329)
T PRK14257 227 SGGQQQRLCIARAIALEPEVLLMDEPTSALDPIATAKIEELILELKK-KYSIIIVTHSMA-QAQRISDETVFFYQ-GWIE 303 (329)
T ss_pred CHHHHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999875 699999999976 36677999999985 7999
Q ss_pred EEcCC
Q 045902 1104 YAGPL 1108 (1472)
Q Consensus 1104 ~~g~~ 1108 (1472)
..|+.
T Consensus 304 e~g~~ 308 (329)
T PRK14257 304 EAGET 308 (329)
T ss_pred EeCCH
Confidence 99876
No 392
>PRK10908 cell division protein FtsE; Provisional
Probab=100.00 E-value=3.8e-33 Score=313.00 Aligned_cols=196 Identities=24% Similarity=0.333 Sum_probs=162.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+.+|+|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|+++..... ++.++|++|++.++
T Consensus 15 ~~~l~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~~i~~~~q~~~~~ 91 (222)
T PRK10908 15 RQALQGVTFHMRPGEMAFLTGHSGAGKSTLLKLICGIERPS---AGKIWFSGHDITRLKNREVPFLRRQIGMIFQDHHLL 91 (222)
T ss_pred CeEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEEcccCChhHHHHHHhheEEEecCcccc
Confidence 36999999999999999999999999999999999999887 8999999998765321 35799999999888
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+||+||+.+.....+... .+.. ..++.+++.+||++..++.++
T Consensus 92 ~~~tv~~~l~~~~~~~~~~~--------------------~~~~--------------~~~~~~l~~~~l~~~~~~~~~- 136 (222)
T PRK10908 92 MDRTVYDNVAIPLIIAGASG--------------------DDIR--------------RRVSAALDKVGLLDKAKNFPI- 136 (222)
T ss_pred ccccHHHHHHhHHHhcCCCH--------------------HHHH--------------HHHHHHHHHcCChhhhhCCch-
Confidence 99999999987643221100 0000 012456788898876666554
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+.+|+|++|
T Consensus 137 ----~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~-~~~~~~~d~i~~l 210 (222)
T PRK10908 137 ----QLSGGEQQRVGIARAVVNKPAVLLADEPTGNLDDALSEGILRLFEEFNR-VGVTVLMATHDI-GLISRRSYRMLTL 210 (222)
T ss_pred ----hCCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 4999999999999999999999999999999999999999999999865 477888877765 4677889999999
Q ss_pred cCCeEE
Q 045902 420 SEGEIV 425 (1472)
Q Consensus 420 ~~G~iv 425 (1472)
++|+++
T Consensus 211 ~~G~i~ 216 (222)
T PRK10908 211 SDGHLH 216 (222)
T ss_pred ECCEEc
Confidence 999985
No 393
>PRK10247 putative ABC transporter ATP-binding protein YbbL; Provisional
Probab=100.00 E-value=3.1e-33 Score=314.21 Aligned_cols=201 Identities=21% Similarity=0.366 Sum_probs=163.8
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 7 ~i~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~ 71 (225)
T PRK10247 7 LLQLQNVGYLA-------------GDAKILNNISFSLRAGEFKLITGPSGCGKSTLLKIVASLIS--PTSGTLLFEGEDI 71 (225)
T ss_pred eEEEeccEEee-------------CCceeeeccEEEEcCCCEEEEECCCCCCHHHHHHHHhcccC--CCCCeEEECCEEc
Confidence 46778877654 23569999999999999999999999999999999999876 4589999999875
Q ss_pred Ch---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCC--chHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHH
Q 045902 957 KQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLP--KDMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKR 1030 (1472)
Q Consensus 957 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~--~~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqR 1030 (1472)
.. ..+++.++|++|++.+++ .|+.||+.+....+.. ....++++++.+++. ...++. +..||||||||
T Consensus 72 ~~~~~~~~~~~i~~~~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LS~G~~qr 145 (225)
T PRK10247 72 STLKPEIYRQQVSYCAQTPTLFG-DTVYDNLIFPWQIRNQQPDPAIFLDDLERFALPDTILTKN-----IAELSGGEKQR 145 (225)
T ss_pred CcCCHHHHHhccEEEeccccccc-ccHHHHHHhHHhhcCCChHHHHHHHHHHHcCCChHHhcCC-----cccCCHHHHHH
Confidence 32 234567899999988876 4999999875443321 123456788888874 344443 34799999999
Q ss_pred HHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCc
Q 045902 1031 LTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGG 1100 (1472)
Q Consensus 1031 l~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg 1100 (1472)
++||++|+.+|++++|||||+|||+.++..+.+.|++++++ |.|||+++|+++. + +.+|++++|.+.+
T Consensus 146 v~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tvii~sh~~~~-~-~~~d~i~~l~~~~ 214 (225)
T PRK10247 146 ISLIRNLQFMPKVLLLDEITSALDESNKHNVNEIIHRYVREQNIAVLWVTHDKDE-I-NHADKVITLQPHA 214 (225)
T ss_pred HHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECChHH-H-HhCCEEEEEeccc
Confidence 99999999999999999999999999999999999999764 8999999999763 4 5799999996433
No 394
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=4.7e-33 Score=319.43 Aligned_cols=210 Identities=27% Similarity=0.312 Sum_probs=168.1
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc-
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP- 955 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~- 955 (1472)
.+.++|+++.++ ++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 6 ~l~~~~l~~~~~-------------~~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~ 70 (258)
T PRK11701 6 LLSVRGLTKLYG-------------PRKGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLA--PDAGEVHYRMRDG 70 (258)
T ss_pred eEEEeeeEEEcC-------------CceeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCccc
Confidence 367778776542 2469999999999999999999999999999999999876 358999999987
Q ss_pred ----CCh---hc----ccceeEEeccCCC--CCCCCCHHHHHHHHHHc-CC-Cc---hHHHHHHHHHccccc-ccccccC
Q 045902 956 ----KKQ---ET----FARISGYCEQNDI--HSPNVTIYESLLYSAWL-RL-PK---DMFVEEVMELVEMKA-LRNSLVG 1016 (1472)
Q Consensus 956 ----~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~l-~~-~~---~~~~~~v~~~l~l~~-~~~~~~~ 1016 (1472)
+.. .. .++.++|++|++. +.+.+|+.|++.+.... .. .. ...+.++++.+++.+ ..++.
T Consensus 71 ~~~~i~~~~~~~~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-- 148 (258)
T PRK11701 71 QLRDLYALSEAERRRLLRTEWGFVHQHPRDGLRMQVSAGGNIGERLMAVGARHYGDIRATAGDWLERVEIDAARIDDL-- 148 (258)
T ss_pred cccccccCCHHHHHHHhhcceEEEeeCcccccCccccHHHHHHHHHHHhccCcHHHHHHHHHHHHHHcCCChhHHhCC--
Confidence 432 11 2346899999974 56778999998764321 11 11 134556777777752 33332
Q ss_pred CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEE
Q 045902 1017 LPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFL 1095 (1472)
Q Consensus 1017 ~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~ 1095 (1472)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+++.|++++++ |.|||+++|+++ .+.+.+|++++
T Consensus 149 ---~~~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~~-~~~~~~d~i~~ 224 (258)
T PRK11701 149 ---PTTFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDLA-VARLLAHRLLV 224 (258)
T ss_pred ---CccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCHH-HHHHhcCEEEE
Confidence 3579999999999999999999999999999999999999999999998765 899999999976 46668999999
Q ss_pred EecCcEEEEEcCC
Q 045902 1096 MKRGGHVIYAGPL 1108 (1472)
Q Consensus 1096 l~~gg~v~~~g~~ 1108 (1472)
|++ |++++.|+.
T Consensus 225 l~~-g~i~~~~~~ 236 (258)
T PRK11701 225 MKQ-GRVVESGLT 236 (258)
T ss_pred EEC-CEEEEeCCH
Confidence 985 789988875
No 395
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-33 Score=320.94 Aligned_cols=201 Identities=23% Similarity=0.317 Sum_probs=161.7
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--C-eeEEEEEEcCccCCh-----hcccceeEEeccCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-YIEGSISISGYPKKQ-----ETFARISGYCEQNDIH 974 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~G~~~~~-----~~~~~~~gyv~Q~~~~ 974 (1472)
+.+|+|+||+|++||+++|+||||||||||+++|+|..++ . +.+|+|.++|.++.. ...++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 4699999999999999999999999999999999998641 1 358999999987532 1345678999999888
Q ss_pred CCCCCHHHHHHHHHHcCC---Cc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 045902 975 SPNVTIYESLLYSAWLRL---PK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE 1048 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l~~---~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDE 1048 (1472)
++. |+.||+.+....+. .. +..++++++.+++.+........ .+..||||||||++|||+|+.+|++|+|||
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-~~~~LS~Gq~qrv~laral~~~p~llllDE 175 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNKKKLDEIVEKSLTSVGLWEELGDRLKD-SAFELSGGQQQRLCIARAIAVKPTMLLMDE 175 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCHHHHHHHHHHHHHHcCCCchhhhHhhc-ChhhCCHHHHHHHHHHHHHhcCCCEEEEeC
Confidence 875 99999987643321 11 12345677777775421111111 235799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1049 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1049 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|++ |++++.|+.
T Consensus 176 Pt~~LD~~~~~~l~~~l~~~~-~~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~~~~~~ 232 (251)
T PRK14244 176 PCSALDPVATNVIENLIQELK-KNFTIIVVTHSMK-QAKKVSDRVAFFQS-GRIVEYNTT 232 (251)
T ss_pred CCccCCHHHHHHHHHHHHHHh-cCCeEEEEeCCHH-HHHhhcCEEEEEEC-CEEEEeCCH
Confidence 999999999999999999985 4899999999976 46778999999986 788888874
No 396
>COG4181 Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, ATPase component [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=2.4e-33 Score=282.19 Aligned_cols=202 Identities=26% Similarity=0.363 Sum_probs=174.6
Q ss_pred CCcccceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-------CceEEEEc
Q 045902 181 SKKRKLEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-------QRTCAYIS 253 (1472)
Q Consensus 181 ~~~~~~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-------~~~~~yv~ 253 (1472)
....+.+||++|++.|++||.++|+|||||||||||-+|+|+-+++ +|+|.+.|+++..... .+.+|+|+
T Consensus 18 ~~~~~l~IL~~V~L~v~~Ge~vaiVG~SGSGKSTLl~vlAGLd~~s---sGeV~l~G~~L~~ldEd~rA~~R~~~vGfVF 94 (228)
T COG4181 18 QGEGELSILKGVELVVKRGETVAIVGPSGSGKSTLLAVLAGLDDPS---SGEVRLLGQPLHKLDEDARAALRARHVGFVF 94 (228)
T ss_pred CCCcceeEeecceEEecCCceEEEEcCCCCcHHhHHHHHhcCCCCC---CceEEEcCcchhhcCHHHHHHhhccceeEEE
Confidence 3456688999999999999999999999999999999999999998 9999999999877643 26899999
Q ss_pred CCCCCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccc
Q 045902 254 QHDLHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICA 333 (1472)
Q Consensus 254 Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~ 333 (1472)
|...++|+||-.||+...+.+++...+. .. ......|+.+||.+-.
T Consensus 95 QSF~Lip~ltAlENV~lPleL~ge~~~~----------------------~~------------~~A~~lL~~vGLg~Rl 140 (228)
T COG4181 95 QSFHLIPNLTALENVALPLELRGESSAD----------------------SR------------AGAKALLEAVGLGKRL 140 (228)
T ss_pred EeeeccccchhhhhccchhhhcCCcccc----------------------HH------------HHHHHHHHHhCccccc
Confidence 9999999999999998877665532110 00 0124468899999877
Q ss_pred cccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhcc
Q 045902 334 DIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLF 413 (1472)
Q Consensus 334 dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~f 413 (1472)
+.+.+ .|||||+|||+||||+...|+|||-||||-+||..|..+|.+.|-.+.+..|.|.|+..|+|. ...-|
T Consensus 141 ~HyP~-----qLSGGEQQRVAiARAfa~~P~vLfADEPTGNLD~~Tg~~iaDLlF~lnre~G~TlVlVTHD~~--LA~Rc 213 (228)
T COG4181 141 THYPA-----QLSGGEQQRVALARAFAGRPDVLFADEPTGNLDRATGDKIADLLFALNRERGTTLVLVTHDPQ--LAARC 213 (228)
T ss_pred ccCcc-----ccCchHHHHHHHHHHhcCCCCEEeccCCCCCcchhHHHHHHHHHHHHhhhcCceEEEEeCCHH--HHHhh
Confidence 75554 599999999999999999999999999999999999999999999999999999999988774 66789
Q ss_pred CeEEEecCCeEEE
Q 045902 414 DDIILLSEGEIVY 426 (1472)
Q Consensus 414 D~iilL~~G~iv~ 426 (1472)
||++-|.+|+++.
T Consensus 214 ~R~~r~~~G~l~~ 226 (228)
T COG4181 214 DRQLRLRSGRLVE 226 (228)
T ss_pred hheeeeecceecc
Confidence 9999999999974
No 397
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=100.00 E-value=3e-33 Score=313.44 Aligned_cols=195 Identities=28% Similarity=0.436 Sum_probs=159.8
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
+.+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 17 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 93 (220)
T cd03245 17 IPALDNVSLTIRAGEKVAIIGRVGSGKSTLLKLLAGLYK--PTSGSVLLDGTDIRQLDPADLRRNIGYVPQDVTLFY-GT 93 (220)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCeEEECCEEhHHCCHHHHHhhEEEeCCCCcccc-ch
Confidence 469999999999999999999999999999999999876 358999999987532 234567899999998776 69
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHcccccccccccC------CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 980 IYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVG------LPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 980 v~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~------~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
+.|++.+... ......++++++.+++.+..+.... ......||||||||++||++|+.+|++|+|||||+||
T Consensus 94 v~e~l~~~~~--~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~~~~~LSgG~~qrl~la~al~~~p~llllDEPt~~L 171 (220)
T cd03245 94 LRDNITLGAP--LADDERILRAAELAGVTDFVNKHPNGLDLQIGERGRGLSGGQRQAVALARALLNDPPILLLDEPTSAM 171 (220)
T ss_pred HHHHhhcCCC--CCCHHHHHHHHHHcCcHHHHHhccccccceecCCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 9999976422 1123345677888888766655321 0123579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1054 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
|+.++..+++.|++++++ +|||++||+++ ..+.+|++++|++ |++++.|
T Consensus 172 D~~~~~~l~~~l~~~~~~-~tii~~sH~~~--~~~~~d~v~~l~~-g~i~~~~ 220 (220)
T cd03245 172 DMNSEERLKERLRQLLGD-KTLIIITHRPS--LLDLVDRIIVMDS-GRIVADG 220 (220)
T ss_pred CHHHHHHHHHHHHHhcCC-CEEEEEeCCHH--HHHhCCEEEEEeC-CeEeecC
Confidence 999999999999999764 89999999976 3479999999986 6776543
No 398
>PRK10619 histidine/lysine/arginine/ornithine transporter subunit; Provisional
Probab=100.00 E-value=6.4e-33 Score=318.09 Aligned_cols=205 Identities=24% Similarity=0.328 Sum_probs=168.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCC----------------CCCceE
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEF----------------VPQRTC 249 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~----------------~~~~~~ 249 (1472)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|+++... ..++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~i 94 (257)
T PRK10619 18 HEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEKPS---EGSIVVNGQTINLVRDKDGQLKVADKNQLRLLRTRL 94 (257)
T ss_pred EEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEcccccccccccccccchHHHHHhhce
Confidence 36999999999999999999999999999999999999887 89999999987531 113579
Q ss_pred EEEcCCCCCCCCCCHHHHHHHhhh-ccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhC
Q 045902 250 AYISQHDLHHGEMTVRETLDFSGR-CLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILG 328 (1472)
Q Consensus 250 ~yv~Q~d~~~~~lTV~E~l~f~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lg 328 (1472)
+|++|++.+++.+||+||+.++.. ..... .. +. ......+++.+|
T Consensus 95 ~~v~q~~~l~~~~sv~enl~~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~g 140 (257)
T PRK10619 95 TMVFQHFNLWSHMTVLENVMEAPIQVLGLS----------KQ----------EA--------------RERAVKYLAKVG 140 (257)
T ss_pred EEEecCcccCCCCcHHHHHHHHHHHhCCCC----------HH----------HH--------------HHHHHHHHHHcC
Confidence 999999999999999999987431 11100 00 00 001345788899
Q ss_pred Ccccc-cccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcc
Q 045902 329 LDICA-DIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAP 407 (1472)
Q Consensus 329 L~~~~-dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~ 407 (1472)
|.+.. +..+ ..|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .
T Consensus 141 l~~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~-~g~tiiivsH~~-~ 213 (257)
T PRK10619 141 IDERAQGKYP-----VHLSGGQQQRVSIARALAMEPEVLLFDEPTSALDPELVGEVLRIMQQLAE-EGKTMVVVTHEM-G 213 (257)
T ss_pred CChhhhhCCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCH-H
Confidence 97653 5444 45999999999999999999999999999999999999999999999875 488888887765 4
Q ss_pred hHHhccCeEEEecCCeEEEecChhHHH
Q 045902 408 ETYDLFDDIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 408 ~~~~~fD~iilL~~G~iv~~G~~~~~~ 434 (1472)
++.+++|+|++|++|++++.|+.+++.
T Consensus 214 ~~~~~~d~i~~l~~G~i~~~~~~~~~~ 240 (257)
T PRK10619 214 FARHVSSHVIFLHQGKIEEEGAPEQLF 240 (257)
T ss_pred HHHHhcCEEEEEECCEEEEeCCHHHhh
Confidence 677889999999999999999987763
No 399
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.2e-33 Score=320.11 Aligned_cols=210 Identities=22% Similarity=0.301 Sum_probs=168.2
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-CeeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GYIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~G 953 (1472)
.+.++|+++.+. ++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|
T Consensus 21 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 87 (268)
T PRK14248 21 ILEVKDLSIYYG-------------EKRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARSEGEILYEG 87 (268)
T ss_pred eEEEEEEEEEeC-------------CceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCCceEEEECC
Confidence 467888876542 3469999999999999999999999999999999999642 1 13589999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cc----hHHHHHHHHHccccc----ccccccCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PK----DMFVEEVMELVEMKA----LRNSLVGLPG 1019 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~----~~~~~~v~~~l~l~~----~~~~~~~~~~ 1019 (1472)
.++.. ..+++.++|++|++.+++. |+.||+.+...... .. +..++++++.+++.. ..+. .
T Consensus 88 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~-----~ 161 (268)
T PRK14248 88 LNILDSNINVVNLRREIGMVFQKPNPFPK-SIYNNITHALKYAGERRKSVLDEIVEESLTKAALWDEVKDRLHS-----S 161 (268)
T ss_pred EEcccccccHHHHhccEEEEecCCccCcc-cHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCCcchHHHHhc-----C
Confidence 87632 1345679999999988875 99999987643221 11 123455666666632 2222 2
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1020 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1020 ~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
+..||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|++
T Consensus 162 ~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiii~tH~~~-~~~~~~d~v~~l~~- 238 (268)
T PRK14248 162 ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE-EYSIIIVTHNMQ-QALRVSDRTAFFLN- 238 (268)
T ss_pred cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc-CCEEEEEEeCHH-HHHHhCCEEEEEEC-
Confidence 457999999999999999999999999999999999999999999999965 689999999976 47788999999985
Q ss_pred cEEEEEcCC
Q 045902 1100 GHVIYAGPL 1108 (1472)
Q Consensus 1100 g~v~~~g~~ 1108 (1472)
|++++.|+.
T Consensus 239 G~i~~~~~~ 247 (268)
T PRK14248 239 GDLVEYDQT 247 (268)
T ss_pred CEEEEeCCH
Confidence 789988875
No 400
>PRK15112 antimicrobial peptide ABC system ATP-binding protein SapF; Provisional
Probab=100.00 E-value=5.9e-33 Score=319.86 Aligned_cols=207 Identities=22% Similarity=0.245 Sum_probs=169.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCC--CCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDL--HHG 260 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~--~~~ 260 (1472)
+++|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|.++..... ++.++|++|++. +++
T Consensus 26 ~~~l~~vsl~i~~Ge~~~i~G~NGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 102 (267)
T PRK15112 26 VEAVKPLSFTLREGQTLAIIGENGSGKSTLAKMLAGMIEPT---SGELLIDDHPLHFGDYSYRSQRIRMIFQDPSTSLNP 102 (267)
T ss_pred cceeeeeeEEecCCCEEEEEcCCCCCHHHHHHHHhCCCCCC---CCEEEECCEECCCCchhhHhccEEEEecCchhhcCc
Confidence 46999999999999999999999999999999999999987 8999999998764221 246999999874 567
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-ccccccccC
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADIMVGN 339 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~vg~ 339 (1472)
.+||.|++.+..+..... ... +. ...++.+++.+||. +..++.+.
T Consensus 103 ~~tv~~~l~~~~~~~~~~---------~~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~~- 148 (267)
T PRK15112 103 RQRISQILDFPLRLNTDL---------EPE----------QR--------------EKQIIETLRQVGLLPDHASYYPH- 148 (267)
T ss_pred chhHHHHHHHHHHhccCC---------CHH----------HH--------------HHHHHHHHHHcCCChHHHhcCch-
Confidence 889999998754321100 000 00 00135578889994 55565554
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|
T Consensus 149 ----~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~g~tviivsH~~-~~~~~~~d~i~~l 223 (267)
T PRK15112 149 ----MLAPGQKQRLGLARALILRPKVIIADEALASLDMSMRSQLINLMLELQEKQGISYIYVTQHL-GMMKHISDQVLVM 223 (267)
T ss_pred ----hcCHHHHHHHHHHHHHHhCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEeCCH-HHHHHhcCEEEEE
Confidence 59999999999999999999999999999999999999999999999775578888887765 4777899999999
Q ss_pred cCCeEEEecChhHHH
Q 045902 420 SEGEIVYQGPREYVL 434 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~ 434 (1472)
++|++++.|+.+++.
T Consensus 224 ~~G~i~~~~~~~~~~ 238 (267)
T PRK15112 224 HQGEVVERGSTADVL 238 (267)
T ss_pred ECCEEEecCCHHHHh
Confidence 999999999987764
No 401
>PRK14268 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.7e-33 Score=318.62 Aligned_cols=205 Identities=22% Similarity=0.332 Sum_probs=163.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCeeCCCCC-----CCceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS--LRVSGRVTYCGHELTEFV-----PQRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 258 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.+++. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 104 (258)
T PRK14268 25 KQALKNVSMQIPKNSVTALIGPSGCGKSTFIRCLNRMNDLIKNCRIEGKVSIEGEDIYEPDVDVVELRKNVGMVFQKPNP 104 (258)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCcccCCCcceEEEECCEEcccccchHHHHhhhEEEEecCCcc
Confidence 35899999999999999999999999999999999998641 012899999999875321 23569999999888
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc----cccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD----ICAD 334 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 334 (1472)
++ +||+||+.|..+..+.. ..+ .+ ..++.+++.+|+. +..+
T Consensus 105 ~~-~tv~enl~~~~~~~~~~----------~~~----------~~--------------~~~~~~l~~~~l~~~~~~~~~ 149 (258)
T PRK14268 105 FP-MSIYDNVAYGPRIHGAN----------KKD----------LD--------------GVVENALRSAALWDETSDRLK 149 (258)
T ss_pred Cc-ccHHHHHHHHHHHcCCC----------HHH----------HH--------------HHHHHHHHHcCCCcchhhhhc
Confidence 87 89999998864322110 000 00 0134467777773 3344
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccC
Q 045902 335 IMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFD 414 (1472)
Q Consensus 335 t~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD 414 (1472)
+.+ +.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++ ++|+|++.|++ .++.+++|
T Consensus 150 ~~~-----~~LSgG~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~--~~tiiivsH~~-~~~~~~~d 221 (258)
T PRK14268 150 SPA-----LSLSGGQQQRLCIARTLAVKPKIILFDEPTSALDPISTARIEDLIMNLKK--DYTIVIVTHNM-QQAARISD 221 (258)
T ss_pred CCh-----hhCCHHHHHHHHHHHHHHcCCCEEEEeCCCcccCHHHHHHHHHHHHHHhh--CCEEEEEECCH-HHHHHhCC
Confidence 444 45999999999999999999999999999999999999999999999853 68888887765 46778999
Q ss_pred eEEEecCCeEEEecChhHH
Q 045902 415 DIILLSEGEIVYQGPREYV 433 (1472)
Q Consensus 415 ~iilL~~G~iv~~G~~~~~ 433 (1472)
++++|++|++++.|+.+++
T Consensus 222 ~i~~l~~G~i~~~~~~~~~ 240 (258)
T PRK14268 222 YTGFFLMGELIEFGQTRQI 240 (258)
T ss_pred EEEEEECCEEEEeCCHHHH
Confidence 9999999999999998776
No 402
>PRK15056 manganese/iron transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.9e-33 Score=323.32 Aligned_cols=211 Identities=27% Similarity=0.434 Sum_probs=169.5
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+. +++.+|+|+|++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+.
T Consensus 6 ~l~~~~l~~~~~------------~~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~i 71 (272)
T PRK15056 6 GIVVNDVTVTWR------------NGHTALRDASFTVPGGSIAALVGVNGSGKSTLFKALMGFVR--LASGKISILGQPT 71 (272)
T ss_pred eEEEEeEEEEec------------CCcEEEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEh
Confidence 467888876542 12469999999999999999999999999999999999876 4589999999876
Q ss_pred ChhcccceeEEeccCCCCC--CCCCHHHHHHHHHHc-----CCCc---hHHHHHHHHHcccccccccccCCCCCCCCCHH
Q 045902 957 KQETFARISGYCEQNDIHS--PNVTIYESLLYSAWL-----RLPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 957 ~~~~~~~~~gyv~Q~~~~~--~~lTv~e~l~~~~~l-----~~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgG 1026 (1472)
.....++.++|++|++.+. ...+++|++.+.... ..+. +..++++++.+++.+..++.+ ..||||
T Consensus 72 ~~~~~~~~i~~v~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgG 146 (272)
T PRK15056 72 RQALQKNLVAYVPQSEEVDWSFPVLVEDVVMMGRYGHMGWLRRAKKRDRQIVTAALARVDMVEFRHRQI-----GELSGG 146 (272)
T ss_pred HHhhccceEEEeccccccccCCCcchhhheecccccccccccCCCHHHHHHHHHHHHHcCChhHhcCCc-----ccCCHH
Confidence 4332234689999997653 235788887653210 1111 234567788888877666543 479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||+++|+++ ++.+.+|+++++ + |++++.|
T Consensus 147 ~~qrv~laraL~~~p~llllDEPt~~LD~~~~~~l~~~L~~~~~~g~tviivsH~~~-~~~~~~d~v~~~-~-G~i~~~g 223 (272)
T PRK15056 147 QKKRVFLARAIAQQGQVILLDEPFTGVDVKTEARIISLLRELRDEGKTMLVSTHNLG-SVTEFCDYTVMV-K-GTVLASG 223 (272)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEE-C-CEEEeec
Confidence 999999999999999999999999999999999999999999877999999999976 467889998766 4 7899888
Q ss_pred CCC
Q 045902 1107 PLG 1109 (1472)
Q Consensus 1107 ~~~ 1109 (1472)
+..
T Consensus 224 ~~~ 226 (272)
T PRK15056 224 PTE 226 (272)
T ss_pred CHH
Confidence 764
No 403
>PRK13642 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=1e-32 Score=319.39 Aligned_cols=205 Identities=22% Similarity=0.281 Sum_probs=169.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC---CCceEEEEcCCCC-CCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV---PQRTCAYISQHDL-HHGE 261 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~---~~~~~~yv~Q~d~-~~~~ 261 (1472)
..+|+|+|+.+++||+++|+|+||||||||+++|+|.++++ +|+|.++|.++.... .++.++|++|++. .++.
T Consensus 20 ~~~l~~v~l~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (277)
T PRK13642 20 VNQLNGVSFSITKGEWVSIIGQNGSGKSTTARLIDGLFEEF---EGKVKIDGELLTAENVWNLRRKIGMVFQNPDNQFVG 96 (277)
T ss_pred CeeeeeeEEEEcCCCEEEEECCCCCcHHHHHHHHhcCCCCC---CCEEEECCEECCcCCHHHHhcceEEEEECHHHhhcc
Confidence 35899999999999999999999999999999999999987 899999999876432 2457999999974 6778
Q ss_pred CCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCcc
Q 045902 262 MTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEM 341 (1472)
Q Consensus 262 lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~ 341 (1472)
.||.||+.+.....+.. +.+ .. ..++.+++.+||++..++.+.
T Consensus 97 ~tv~eni~~~~~~~~~~----------~~~----------~~--------------~~~~~~l~~~~l~~~~~~~~~--- 139 (277)
T PRK13642 97 ATVEDDVAFGMENQGIP----------REE----------MI--------------KRVDEALLAVNMLDFKTREPA--- 139 (277)
T ss_pred CCHHHHHHhhHHHcCCC----------HHH----------HH--------------HHHHHHHHHCCCHhHhhCCcc---
Confidence 89999998754321110 000 00 013567888899877776554
Q ss_pred CCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC
Q 045902 342 RRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE 421 (1472)
Q Consensus 342 ~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~ 421 (1472)
.|||||||||+|||||+.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++. .+|+|++|++
T Consensus 140 --~LS~G~~qrv~lAraL~~~p~llllDEPt~~LD~~~~~~l~~~l~~l~~~~g~tiil~sH~~~-~~~-~~d~i~~l~~ 215 (277)
T PRK13642 140 --RLSGGQKQRVAVAGIIALRPEIIILDESTSMLDPTGRQEIMRVIHEIKEKYQLTVLSITHDLD-EAA-SSDRILVMKA 215 (277)
T ss_pred --cCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHH-hCCEEEEEEC
Confidence 499999999999999999999999999999999999999999999997755889999887765 444 6999999999
Q ss_pred CeEEEecChhHHH
Q 045902 422 GEIVYQGPREYVL 434 (1472)
Q Consensus 422 G~iv~~G~~~~~~ 434 (1472)
|+++..|+.+++.
T Consensus 216 G~i~~~g~~~~~~ 228 (277)
T PRK13642 216 GEIIKEAAPSELF 228 (277)
T ss_pred CEEEEeCCHHHHh
Confidence 9999999988764
No 404
>PRK10575 iron-hydroxamate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=5.1e-33 Score=320.17 Aligned_cols=209 Identities=24% Similarity=0.358 Sum_probs=171.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|+++..... ++.++|++|+..+++.+
T Consensus 24 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 100 (265)
T PRK10575 24 RTLLHPLSLTFPAGKVTGLIGHNGSGKSTLLKMLGRHQPPS---EGEILLDAQPLESWSSKAFARKVAYLPQQLPAAEGM 100 (265)
T ss_pred EEEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEehhhCCHHHHhhheEEeccCCCCCCCc
Confidence 36999999999999999999999999999999999999887 8999999998754322 35699999998888999
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||.||+.+...... .. . +. ..... ...++.+++.+||++..++.+++
T Consensus 101 tv~e~l~~~~~~~~-~~-~-------------~~-~~~~~--------------~~~~~~~l~~~~l~~~~~~~~~~--- 147 (265)
T PRK10575 101 TVRELVAIGRYPWH-GA-L-------------GR-FGAAD--------------REKVEEAISLVGLKPLAHRLVDS--- 147 (265)
T ss_pred cHHHHHHhCccccc-cc-c-------------cC-CCHHH--------------HHHHHHHHHHcCCHHHhcCCccc---
Confidence 99999987532100 00 0 00 00000 00135578888998777776654
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++++..+.|+|++.|++ .++.+++|+|++|++|
T Consensus 148 --LSgG~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~l~~~~~~tiii~sH~~-~~i~~~~d~i~~l~~G 224 (265)
T PRK10575 148 --LSGGERQRAWIAMLVAQDSRCLLLDEPTSALDIAHQVDVLALVHRLSQERGLTVIAVLHDI-NMAARYCDYLVALRGG 224 (265)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHHhCCEEEEEECC
Confidence 9999999999999999999999999999999999999999999998765578888888765 4777899999999999
Q ss_pred eEEEecChhHH
Q 045902 423 EIVYQGPREYV 433 (1472)
Q Consensus 423 ~iv~~G~~~~~ 433 (1472)
++++.|+.+++
T Consensus 225 ~i~~~~~~~~~ 235 (265)
T PRK10575 225 EMIAQGTPAEL 235 (265)
T ss_pred eEEEecCHHHh
Confidence 99999998765
No 405
>PRK11124 artP arginine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=4.6e-33 Score=316.57 Aligned_cols=203 Identities=26% Similarity=0.355 Sum_probs=167.5
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCC------C---CCCceEEEEcCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTE------F---VPQRTCAYISQHDL 257 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~------~---~~~~~~~yv~Q~d~ 257 (1472)
.+|+|+|+.+++||+++|+|||||||||||++|+|..+++ +|+|.++|.++.. . ..++.++|++|++.
T Consensus 16 ~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 92 (242)
T PRK11124 16 QALFDITLDCPQGETLVLLGPSGAGKSSLLRVLNLLEMPR---SGTLNIAGNHFDFSKTPSDKAIRELRRNVGMVFQQYN 92 (242)
T ss_pred eeEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ceEEEECCEecccccccchhhHHHHHhheEEEecCcc
Confidence 5999999999999999999999999999999999999887 8999999997631 1 11356999999999
Q ss_pred CCCCCCHHHHHHHhh-hccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccc
Q 045902 258 HHGEMTVRETLDFSG-RCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIM 336 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~ 336 (1472)
+++.+||+||+.+.. ...+.. .. +. ...++.+++.+||+...++.
T Consensus 93 ~~~~~tv~e~i~~~~~~~~~~~----------~~----------~~--------------~~~~~~~l~~~gl~~~~~~~ 138 (242)
T PRK11124 93 LWPHLTVQQNLIEAPCRVLGLS----------KD----------QA--------------LARAEKLLERLRLKPYADRF 138 (242)
T ss_pred ccCCCcHHHHHHHHHHHHcCCC----------HH----------HH--------------HHHHHHHHHHcCChhhhhCC
Confidence 999999999996531 111100 00 00 00135578889998777766
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 337 VGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 337 vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
++ .|||||||||+||||++.+|++++|||||+|||..++..+.+.|+++.+ .+.|++++.|++. ++.+++|++
T Consensus 139 ~~-----~LS~G~~qrv~laral~~~p~llilDEPt~~LD~~~~~~l~~~l~~~~~-~~~tii~~sh~~~-~~~~~~d~i 211 (242)
T PRK11124 139 PL-----HLSGGQQQRVAIARALMMEPQVLLFDEPTAALDPEITAQIVSIIRELAE-TGITQVIVTHEVE-VARKTASRV 211 (242)
T ss_pred hh-----hCCHHHHHHHHHHHHHhcCCCEEEEcCCCCcCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCHH-HHHHhcCEE
Confidence 54 5999999999999999999999999999999999999999999999865 5788888877764 667889999
Q ss_pred EEecCCeEEEecChhHH
Q 045902 417 ILLSEGEIVYQGPREYV 433 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~ 433 (1472)
++|.+|+++++|+.+++
T Consensus 212 ~~l~~g~i~~~~~~~~~ 228 (242)
T PRK11124 212 VYMENGHIVEQGDASCF 228 (242)
T ss_pred EEEECCEEEEeCCHHHh
Confidence 99999999999987754
No 406
>PRK14249 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-33 Score=316.84 Aligned_cols=213 Identities=23% Similarity=0.301 Sum_probs=167.7
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcCc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISGY 954 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G~ 954 (1472)
+.++|+++.. +++.+|+|+|++|++|+++||+||||||||||+++|+|..++. +.+|+|.++|.
T Consensus 5 l~~~~l~~~~-------------~~~~il~~~s~~i~~G~~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 71 (251)
T PRK14249 5 IKIRGVNFFY-------------HKHQVLKNINMDFPERQITAIIGPSGCGKSTLLRALNRMNDIVSGARLEGAVLLDNE 71 (251)
T ss_pred EEEEEEEEEE-------------CCeeEecceEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCccccCCcccEEEECCE
Confidence 5567776554 2346999999999999999999999999999999999987632 13699999998
Q ss_pred cCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cc----hHHHHHHHHHcccccccccccCCCCCCCCC
Q 045902 955 PKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PK----DMFVEEVMELVEMKALRNSLVGLPGVDGLS 1024 (1472)
Q Consensus 955 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~----~~~~~~v~~~l~l~~~~~~~~~~~~~~~LS 1024 (1472)
++.. ...++.++|++|++.+++. |++||+.+....+. .. +...+++++.+++.+....... ..+..||
T Consensus 72 ~~~~~~~~~~~~~~~i~~v~q~~~~~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS 149 (251)
T PRK14249 72 NIYSPNLDVVNLRKRVGMVFQQPNPFPK-SIFDNVAFGPRMLGTTAQSRLDEVVEKSLRQAALWDEVKDNLH-KSGLALS 149 (251)
T ss_pred EccccccChHHhhceEEEEecCCccCcC-cHHHHHhhHHHhcCCChhhHHHHHHHHHHHHhCCchhhhhHhh-CCcccCC
Confidence 7532 2346779999999988875 99999988654322 11 1234555666665421111111 1245799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1025 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1025 gGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++. +|+|||+++|+++ ++.+.+|++++|.+ |++++
T Consensus 150 ~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~-~~~tilivsh~~~-~~~~~~d~i~~l~~-G~i~~ 226 (251)
T PRK14249 150 GGQQQRLCIARVLAIEPEVILMDEPCSALDPVSTMRIEELMQELK-QNYTIAIVTHNMQ-QAARASDWTGFLLT-GDLVE 226 (251)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHhhCCEEEEEeC-CeEEE
Confidence 999999999999999999999999999999999999999999985 5899999999976 46778999999985 78888
Q ss_pred EcCC
Q 045902 1105 AGPL 1108 (1472)
Q Consensus 1105 ~g~~ 1108 (1472)
.|+.
T Consensus 227 ~~~~ 230 (251)
T PRK14249 227 YGRT 230 (251)
T ss_pred eCCH
Confidence 8875
No 407
>PRK14271 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9.9e-33 Score=319.02 Aligned_cols=215 Identities=23% Similarity=0.300 Sum_probs=172.2
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G 953 (1472)
.+.++|+++.++ ++.+|+||||+|++||+++|+||||||||||+++|+|..++. +.+|+|.++|
T Consensus 21 ~l~i~nl~~~~~-------------~~~il~~vs~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~p~~~~~~~G~i~~~g 87 (276)
T PRK14271 21 AMAAVNLTLGFA-------------GKTVLDQVSMGFPARAVTSLMGPTGSGKTTFLRTLNRMNDKVSGYRYSGDVLLGG 87 (276)
T ss_pred EEEEeeEEEEEC-------------CEEEeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcCCCCCCceEEEECC
Confidence 567888877652 356999999999999999999999999999999999986531 3589999999
Q ss_pred ccCCh----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cch---HHHHHHHHHcccccccccccCCCCCCCCC
Q 045902 954 YPKKQ----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLS 1024 (1472)
Q Consensus 954 ~~~~~----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LS 1024 (1472)
.++.. ...++.++|++|++.+++ .|++||+.+...... +.. ...+++++.+++.+..+.... ..+..||
T Consensus 88 ~~i~~~~~~~~~~~~i~~v~q~~~l~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~l~-~~~~~LS 165 (276)
T PRK14271 88 RSIFNYRDVLEFRRRVGMLFQRPNPFP-MSIMDNVLAGVRAHKLVPRKEFRGVAQARLTEVGLWDAVKDRLS-DSPFRLS 165 (276)
T ss_pred EEccccchhHHHhhheEEeccCCccCC-ccHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCCCchhhhHhh-CCcccCC
Confidence 87532 234567899999988887 899999987543221 211 223566777777543221111 1245799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1025 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1025 gGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ ++|||+++|+++ ++.+.+|++++|.+ |+++.
T Consensus 166 gGq~qrl~LAral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tiiivsH~~~-~~~~~~dri~~l~~-G~i~~ 242 (276)
T PRK14271 166 GGQQQLLCLARTLAVNPEVLLLDEPTSALDPTTTEKIEEFIRSLAD-RLTVIIVTHNLA-QAARISDRAALFFD-GRLVE 242 (276)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999976 589999999976 46788999999985 78998
Q ss_pred EcCCC
Q 045902 1105 AGPLG 1109 (1472)
Q Consensus 1105 ~g~~~ 1109 (1472)
.|+..
T Consensus 243 ~g~~~ 247 (276)
T PRK14271 243 EGPTE 247 (276)
T ss_pred eCCHH
Confidence 88753
No 408
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=4.2e-33 Score=312.16 Aligned_cols=190 Identities=26% Similarity=0.383 Sum_probs=161.7
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQNDIHSP 976 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~~~~~ 976 (1472)
+.+|+|+||++++|+++||+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 95 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRS--VQEGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLLG 95 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhcC
Confidence 579999999999999999999999999999999999876 458999999987532 134567999999999998
Q ss_pred CCCHHHHHHHHHHcCC--Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 045902 977 NVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1051 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTs 1051 (1472)
.+|+.||+.+...... ..+ ..++++++.+++.+..+... ..||+|||||++||++|+.+|++|+|||||+
T Consensus 96 ~~t~~~n~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~lS~G~~qrv~laral~~~p~illlDEP~~ 170 (220)
T TIGR02982 96 FLTARQNVQMALELQPNLSYQEARERARAMLEAVGLGDHLDYYP-----HNLSGGQKQRVAIARALVHRPKLVLADEPTA 170 (220)
T ss_pred CCCHHHHHHHHHHhccCCCHHHHHHHHHHHHHHcCChhhhhcCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCCC
Confidence 8999999988654331 112 34677888888876655543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhh-CCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1052 GLDARAAAIVMRTVRNTVD-TGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~-~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
|||+.++..+.+.|+++.+ .|+|||+++|+++ +.+.+|++++|.+ |++
T Consensus 171 ~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l~~-g~~ 219 (220)
T TIGR02982 171 ALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHMED-GKL 219 (220)
T ss_pred cCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEEEC-CEE
Confidence 9999999999999999976 4899999999975 4588999999985 554
No 409
>PRK10418 nikD nickel transporter ATP-binding protein NikD; Provisional
Probab=100.00 E-value=1.4e-32 Score=314.68 Aligned_cols=206 Identities=24% Similarity=0.296 Sum_probs=165.7
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC-CceeEEEEcCeeCCCCCC-CceEEEEcCCCC--CCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSL-RVSGRVTYCGHELTEFVP-QRTCAYISQHDL--HHGEM 262 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~-~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~--~~~~l 262 (1472)
.+|+|+|+.+++||+++|+||||||||||+++|+|.+++.. ..+|+|.++|++++.... ++.++|++|++. +.+.+
T Consensus 17 ~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~G~i~~~g~~i~~~~~~~~~i~~v~q~~~~~~~~~~ 96 (254)
T PRK10418 17 PLVHGVSLTLQRGRVLALVGGSGSGKSLTCAAALGILPAGVRQTAGRVLLDGKPVAPCALRGRKIATIMQNPRSAFNPLH 96 (254)
T ss_pred ceecceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCCCCcCCEEEECCeeccccccccceEEEEecCCccccCccc
Confidence 58999999999999999999999999999999999998710 028999999998764322 257999999974 44668
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc---cccccccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI---CADIMVGN 339 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~---~~dt~vg~ 339 (1472)
|+.+++.+.++..+.. ..+ ...+.+++.+||.+ ..++.+
T Consensus 97 ~~~~~~~~~~~~~~~~----------~~~--------------------------~~~~~~l~~~~l~~~~~~~~~~~-- 138 (254)
T PRK10418 97 TMHTHARETCLALGKP----------ADD--------------------------ATLTAALEAVGLENAARVLKLYP-- 138 (254)
T ss_pred cHHHHHHHHHHHcCCC----------hHH--------------------------HHHHHHHHHcCCCChhhhhhcCC--
Confidence 9999986643211100 000 01345778888875 345444
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
..|||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++++..+.|++++.|++. ++.+++|++++|
T Consensus 139 ---~~LS~Gq~qrv~laral~~~p~lLlLDEPt~~LD~~~~~~l~~~L~~~~~~~g~til~~sH~~~-~~~~~~d~v~~l 214 (254)
T PRK10418 139 ---FEMSGGMLQRMMIALALLCEAPFIIADEPTTDLDVVAQARILDLLESIVQKRALGMLLVTHDMG-VVARLADDVAVM 214 (254)
T ss_pred ---cccCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHhcCcEEEEEecCHH-HHHHhCCEEEEE
Confidence 4599999999999999999999999999999999999999999999987656788888877654 567889999999
Q ss_pred cCCeEEEecChhHHH
Q 045902 420 SEGEIVYQGPREYVL 434 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~ 434 (1472)
++|++++.|+.+++.
T Consensus 215 ~~G~i~~~~~~~~~~ 229 (254)
T PRK10418 215 SHGRIVEQGDVETLF 229 (254)
T ss_pred ECCEEEEecCHHHHh
Confidence 999999999988763
No 410
>TIGR00968 3a0106s01 sulfate ABC transporter, ATP-binding protein.
Probab=100.00 E-value=7.9e-33 Score=313.40 Aligned_cols=206 Identities=27% Similarity=0.422 Sum_probs=173.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCH
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTV 264 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV 264 (1472)
+++|+|+|+++++||+++|+||||||||||+++|+|.++++ +|+|.++|.++..... ++.++|++|++.+++.+|+
T Consensus 13 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~i~g~~~~~~~~~~~~i~~~~q~~~~~~~~t~ 89 (237)
T TIGR00968 13 FQALDDVNLEVPTGSLVALLGPSGSGKSTLLRIIAGLEQPD---SGRIRLNGQDATRVHARDRKIGFVFQHYALFKHLTV 89 (237)
T ss_pred eeeeeeEEEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCCC---ceEEEECCEEcCcCChhhcCEEEEecChhhccCCcH
Confidence 36999999999999999999999999999999999999887 8999999998765433 3579999999999999999
Q ss_pred HHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCC
Q 045902 265 RETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRG 344 (1472)
Q Consensus 265 ~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~g 344 (1472)
+||+.+.....+.. ... .. ...+.+++.+|+....|+.++ .
T Consensus 90 ~enl~~~~~~~~~~----------~~~----------~~--------------~~~~~~l~~~~l~~~~~~~~~-----~ 130 (237)
T TIGR00968 90 RDNIAFGLEIRKHP----------KAK----------IK--------------ARVEELLELVQLEGLGDRYPN-----Q 130 (237)
T ss_pred HHHHHhHHHhcCCC----------HHH----------HH--------------HHHHHHHHHcCCHhHhhCChh-----h
Confidence 99998764322110 000 00 013457788888777776655 4
Q ss_pred CChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeE
Q 045902 345 ISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEI 424 (1472)
Q Consensus 345 LSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~i 424 (1472)
||||||||++||++++.+|++++|||||+|||..+...+.+.|+++++..++|+|++.|++. ++.+++|++++|++|++
T Consensus 131 lS~G~~qrl~laral~~~p~llllDEP~~~LD~~~~~~~~~~l~~~~~~~~~tvli~sH~~~-~~~~~~d~i~~l~~g~i 209 (237)
T TIGR00968 131 LSGGQRQRVALARALAVEPQVLLLDEPFGALDAKVRKELRSWLRKLHDEVHVTTVFVTHDQE-EAMEVADRIVVMSNGKI 209 (237)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHhhcCEEEEEECCEE
Confidence 99999999999999999999999999999999999999999999987655789999888764 67889999999999999
Q ss_pred EEecChhHHH
Q 045902 425 VYQGPREYVL 434 (1472)
Q Consensus 425 v~~G~~~~~~ 434 (1472)
++.|+.+++.
T Consensus 210 ~~~~~~~~~~ 219 (237)
T TIGR00968 210 EQIGSPDEVY 219 (237)
T ss_pred EEecCHHHHH
Confidence 9999988764
No 411
>PRK14254 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.6e-33 Score=322.34 Aligned_cols=213 Identities=25% Similarity=0.344 Sum_probs=168.4
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---CeeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GYIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~G 953 (1472)
.+.++++++.+. ++.+|+|+||+|++||++||+||||||||||+++|+|..++ .+.+|+|.++|
T Consensus 39 ~l~i~~l~~~~~-------------~~~il~~is~~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~I~i~G 105 (285)
T PRK14254 39 VIEARDLNVFYG-------------DEQALDDVSMDIPENQVTAMIGPSGCGKSTFLRCINRMNDLIDAARVEGELTFRG 105 (285)
T ss_pred eEEEEEEEEEEC-------------CEeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECC
Confidence 467888876542 24699999999999999999999999999999999998642 13589999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cc--hHHHHHHHHHcccccc-cccccCCCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PK--DMFVEEVMELVEMKAL-RNSLVGLPGVDGLS 1024 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~--~~~~~~v~~~l~l~~~-~~~~~~~~~~~~LS 1024 (1472)
.++.. ...++.++|++|++.+++. |+.||+.+....+. +. +..++++++.+++.+. .+.. . ..+..||
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~-~-~~~~~LS 182 (285)
T PRK14254 106 KNVYDADVDPVALRRRIGMVFQKPNPFPK-SIYDNVAYGLKIQGYDGDIDERVEESLRRAALWDEVKDQL-D-SSGLDLS 182 (285)
T ss_pred EEccccccchHhhhccEEEEecCCccCcC-CHHHHHHHHHHHcCCcHHHHHHHHHHHHHcCCCchhHHHH-h-CCcccCC
Confidence 87531 2345679999999888775 99999987654322 21 2345667777776421 1111 1 1235799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEE-EecCcEEE
Q 045902 1025 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFL-MKRGGHVI 1103 (1472)
Q Consensus 1025 gGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~-l~~gg~v~ 1103 (1472)
||||||++||++|+.+|+||+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++ |+ +|+++
T Consensus 183 gGe~qrv~LAraL~~~p~lLLLDEPts~LD~~~~~~l~~~L~~~~~-~~tiii~tH~~~-~i~~~~dri~v~l~-~G~i~ 259 (285)
T PRK14254 183 GGQQQRLCIARAIAPDPEVILMDEPASALDPVATSKIEDLIEELAE-EYTVVIVTHNMQ-QAARISDKTAVFLT-GGELV 259 (285)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHhc-CCEEEEEeCCHH-HHHhhcCEEEEEee-CCEEE
Confidence 9999999999999999999999999999999999999999999976 489999999976 46678999764 56 57888
Q ss_pred EEcCC
Q 045902 1104 YAGPL 1108 (1472)
Q Consensus 1104 ~~g~~ 1108 (1472)
..|+.
T Consensus 260 ~~g~~ 264 (285)
T PRK14254 260 EFDDT 264 (285)
T ss_pred EeCCH
Confidence 88874
No 412
>PRK10253 iron-enterobactin transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.5e-33 Score=319.90 Aligned_cols=210 Identities=23% Similarity=0.332 Sum_probs=171.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|++..++.+
T Consensus 20 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 96 (265)
T PRK10253 20 YTVAENLTVEIPDGHFTAIIGPNGCGKSTLLRTLSRLMTPA---HGHVWLDGEHIQHYASKEVARRIGLLAQNATTPGDI 96 (265)
T ss_pred EEEeeecceEECCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CcEEEECCEEhhhCCHHHHhhheEEeeccCcCCCCC
Confidence 36999999999999999999999999999999999999887 8999999998765432 34699999999999999
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||+||+.+...-... .. . . ..... ...++.+++.+||++..|+.+.
T Consensus 97 tv~~~~~~~~~~~~~-----~~---~-------~-~~~~~--------------~~~~~~~l~~~~l~~~~~~~~~---- 142 (265)
T PRK10253 97 TVQELVARGRYPHQP-----LF---T-------R-WRKED--------------EEAVTKAMQATGITHLADQSVD---- 142 (265)
T ss_pred cHHHHHHhCcccccc-----cc---c-------C-CCHHH--------------HHHHHHHHHHcCCHHHhcCCcc----
Confidence 999999875210000 00 0 0 00000 0013557888999877776654
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
.||||||||++||+|++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++. ++.+++|++++|++|
T Consensus 143 -~LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~L~~l~~~~~~tiii~tH~~~-~~~~~~d~i~~l~~G 220 (265)
T PRK10253 143 -TLSGGQRQRAWIAMVLAQETAIMLLDEPTTWLDISHQIDLLELLSELNREKGYTLAAVLHDLN-QACRYASHLIALREG 220 (265)
T ss_pred -cCChHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEEEEECC
Confidence 499999999999999999999999999999999999999999999997655788888877654 788999999999999
Q ss_pred eEEEecChhHHH
Q 045902 423 EIVYQGPREYVL 434 (1472)
Q Consensus 423 ~iv~~G~~~~~~ 434 (1472)
++++.|+.+++.
T Consensus 221 ~i~~~g~~~~~~ 232 (265)
T PRK10253 221 KIVAQGAPKEIV 232 (265)
T ss_pred EEEEeCCHHHHh
Confidence 999999987764
No 413
>PRK13639 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=7.9e-33 Score=320.03 Aligned_cols=204 Identities=27% Similarity=0.374 Sum_probs=168.2
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-----CCceEEEEcCCCC-CCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-----PQRTCAYISQHDL-HHG 260 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~~ 260 (1472)
.+|+|+|+++++||+++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++. .+.
T Consensus 16 ~~l~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~i~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (275)
T PRK13639 16 EALKGINFKAEKGEMVALLGPNGAGKSTLFLHFNGILKPT---SGEVLIKGEPIKYDKKSLLEVRKTVGIVFQNPDDQLF 92 (275)
T ss_pred eeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---ccEEEECCEECccccchHHHHHhheEEEeeChhhhhc
Confidence 5899999999999999999999999999999999999887 899999999875211 1357999999963 344
Q ss_pred CCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCc
Q 045902 261 EMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNE 340 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~ 340 (1472)
.+||+||+.+.....+. .+.+. ...+..+++.+||++..|+.+++
T Consensus 93 ~~tv~e~i~~~~~~~~~----------~~~~~------------------------~~~~~~~l~~~~L~~~~~~~~~~- 137 (275)
T PRK13639 93 APTVEEDVAFGPLNLGL----------SKEEV------------------------EKRVKEALKAVGMEGFENKPPHH- 137 (275)
T ss_pred cccHHHHHHHHHHHcCC----------CHHHH------------------------HHHHHHHHHHCCCchhhcCChhh-
Confidence 57999999875321110 00000 00134578899998888877654
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
||||||||++||++|+.+|++++|||||+|||+.++.++.+.|+++++ .+.|++++.|++ .++.+++|++++|+
T Consensus 138 ----LS~Gq~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~~til~vtH~~-~~~~~~~d~i~~l~ 211 (275)
T PRK13639 138 ----LSGGQKKRVAIAGILAMKPEIIVLDEPTSGLDPMGASQIMKLLYDLNK-EGITIIISTHDV-DLVPVYADKVYVMS 211 (275)
T ss_pred ----CCHHHHHHHHHHHHHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHH-CCCEEEEEecCH-HHHHHhCCEEEEEE
Confidence 999999999999999999999999999999999999999999999876 478888887764 46778999999999
Q ss_pred CCeEEEecChhHHH
Q 045902 421 EGEIVYQGPREYVL 434 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~ 434 (1472)
+|++++.|+.+++.
T Consensus 212 ~G~i~~~g~~~~~~ 225 (275)
T PRK13639 212 DGKIIKEGTPKEVF 225 (275)
T ss_pred CCEEEEeCCHHHHh
Confidence 99999999998874
No 414
>PRK14275 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.9e-33 Score=321.94 Aligned_cols=213 Identities=21% Similarity=0.325 Sum_probs=168.3
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-CeeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GYIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~G 953 (1472)
.+.++++++.+. +..+|+|+|++|++||+++|+||||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 39 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~L~Gl~~~~p~~~~~G~I~~~g 105 (286)
T PRK14275 39 HVVAKNFSIYYG-------------EFEAVKKVNADILSKYVTAIIGPSGCGKSTFLRAINRMNDLIPSCHTTGALMFDG 105 (286)
T ss_pred EEEEeeeEEEEC-------------CEEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCCceEEEECC
Confidence 577888876542 2469999999999999999999999999999999999643 1 12589999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cc-h---HHHHHHHHHccccc-ccccccCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PK-D---MFVEEVMELVEMKA-LRNSLVGLPGVDG 1022 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~-~---~~~~~v~~~l~l~~-~~~~~~~~~~~~~ 1022 (1472)
.++.. ...++.++|++|++.+++. ||.||+.+....+. .. . ..+.++++.+++.. +.+... ..+..
T Consensus 106 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~~-tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~--~~~~~ 182 (286)
T PRK14275 106 EDIYGKFTDEVLLRKKIGMVFQKPNPFPK-SIFDNIAYGPRLHGINDKKQLEEIVEKSLRKAALWDEVSDRLD--KNALG 182 (286)
T ss_pred EEhhhcccchHHhhhcEEEECCCCCCCcc-CHHHHHHhHHHhcCCCcHHHHHHHHHHHHHHhCCccchhhHhh--CChhh
Confidence 87532 1345679999999988875 99999988654321 11 1 23445666666531 112111 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||||||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|.+ |++
T Consensus 183 LSgGq~qrv~LAraL~~~p~lllLDEPt~gLD~~~~~~l~~~L~~~~~-~~tvIivsH~~~-~~~~~~d~i~~L~~-G~i 259 (286)
T PRK14275 183 LSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRG-SYTIMIVTHNMQ-QASRVSDYTMFFYE-GVL 259 (286)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEeCCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999865 689999999976 46778999999985 789
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
+..|+.
T Consensus 260 ~~~g~~ 265 (286)
T PRK14275 260 VEHAPT 265 (286)
T ss_pred EEeCCH
Confidence 888875
No 415
>PRK10771 thiQ thiamine transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6.4e-33 Score=313.27 Aligned_cols=201 Identities=22% Similarity=0.385 Sum_probs=168.9
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC-CceEEEEcCCCCCCCCCCHHHHHH
Q 045902 191 DVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP-QRTCAYISQHDLHHGEMTVRETLD 269 (1472)
Q Consensus 191 ~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~-~~~~~yv~Q~d~~~~~lTV~E~l~ 269 (1472)
|+|+.+++|++++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|++.+++.+||+||+.
T Consensus 17 ~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~i~~~~q~~~~~~~~tv~e~l~ 93 (232)
T PRK10771 17 RFDLTVERGERVAILGPSGAGKSTLLNLIAGFLTPA---SGSLTLNGQDHTTTPPSRRPVSMLFQENNLFSHLTVAQNIG 93 (232)
T ss_pred eeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCeecCcCChhhccEEEEecccccccCCcHHHHHh
Confidence 899999999999999999999999999999999887 8999999998765432 357999999999999999999998
Q ss_pred HhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHH
Q 045902 270 FSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQ 349 (1472)
Q Consensus 270 f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGq 349 (1472)
+.... .... .+.. ...++.+++.+||++..|+.+.. |||||
T Consensus 94 ~~~~~-~~~~--------~~~~-------------------------~~~~~~~l~~~~l~~~~~~~~~~-----LS~G~ 134 (232)
T PRK10771 94 LGLNP-GLKL--------NAAQ-------------------------REKLHAIARQMGIEDLLARLPGQ-----LSGGQ 134 (232)
T ss_pred ccccc-ccCC--------CHHH-------------------------HHHHHHHHHHcCcHHHHhCCccc-----CCHHH
Confidence 75321 0000 0000 01135578889998877877654 99999
Q ss_pred HHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEEecC
Q 045902 350 KKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVYQGP 429 (1472)
Q Consensus 350 rkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~~G~ 429 (1472)
||||+||++++.+|++++|||||+|||..++..+.+.|+++++..+.|+|++.|++. ++.+++|++++|++|++++.|+
T Consensus 135 ~qrv~laral~~~p~lllLDEP~~gLD~~~~~~~~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g~i~~~g~ 213 (232)
T PRK10771 135 RQRVALARCLVREQPILLLDEPFSALDPALRQEMLTLVSQVCQERQLTLLMVSHSLE-DAARIAPRSLVVADGRIAWDGP 213 (232)
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-HHHHhCCEEEEEECCEEEEeCC
Confidence 999999999999999999999999999999999999999987655789888887764 6778999999999999999999
Q ss_pred hhHHH
Q 045902 430 REYVL 434 (1472)
Q Consensus 430 ~~~~~ 434 (1472)
.+++.
T Consensus 214 ~~~~~ 218 (232)
T PRK10771 214 TDELL 218 (232)
T ss_pred HHHHH
Confidence 87764
No 416
>PRK14261 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.6e-33 Score=316.84 Aligned_cols=213 Identities=27% Similarity=0.327 Sum_probs=169.0
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G 953 (1472)
.+.++|+++.+ +++.+|+|+|+++++||+++|+||||||||||+++|+|..... +.+|+|.++|
T Consensus 6 ~i~~~~l~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 72 (253)
T PRK14261 6 ILSTKNLNLWY-------------GEKHALYDITISIPKNRVTALIGPSGCGKSTLLRCFNRMNDLIPGCRITGDILYNG 72 (253)
T ss_pred eEEEeeeEEEE-------------CCeeeeeeeEEEECCCcEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECC
Confidence 46777877654 2346999999999999999999999999999999999975421 2479999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCC--c---hHHHHHHHHHccccc-ccccccCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLP--K---DMFVEEVMELVEMKA-LRNSLVGLPGVDG 1022 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~--~---~~~~~~v~~~l~l~~-~~~~~~~~~~~~~ 1022 (1472)
.++.. ...++.++|++|++.+++. ||+||+.+....+.. . +..++++++.+++.+ +.+.. . .....
T Consensus 73 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~-~~~~~ 149 (253)
T PRK14261 73 ENIMDSGADVVALRRKIGMVFQRPNPFPK-SIYENVAYGPRIHGEKNKKTLDTIVEKSLKGAALWDEVKDRL-H-DSALS 149 (253)
T ss_pred EEccccccchhhhhceEEEEecCCccCcc-cHHHHHHhhHHhcCCCCHHHHHHHHHHHHHHhcCchhhHHHh-h-cChhh
Confidence 87632 2345678999999988875 999999987543321 1 123556667766642 11111 1 12457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||||||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++++ ++|||+++|++. ++.+.+|++++|++ |++
T Consensus 150 LS~G~~qrv~laral~~~p~lllLDEP~~gLD~~~~~~l~~~l~~~~~-~~tvii~sh~~~-~~~~~~d~v~~l~~-G~i 226 (253)
T PRK14261 150 LSGGQQQRLCIARTLAVNPEVILMDEPCSALDPIATAKIEDLIEDLKK-EYTVIIVTHNMQ-QAARVSDYTGFMYL-GKL 226 (253)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhh-CceEEEEEcCHH-HHHhhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999975 689999999976 46678999999985 788
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
+..|+.
T Consensus 227 ~~~g~~ 232 (253)
T PRK14261 227 IEFDKT 232 (253)
T ss_pred EEcCCH
Confidence 888875
No 417
>COG4175 ProV ABC-type proline/glycine betaine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=1.1e-33 Score=310.50 Aligned_cols=199 Identities=23% Similarity=0.309 Sum_probs=172.4
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC---h----hcccceeEEeccCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK---Q----ETFARISGYCEQNDIHS 975 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~---~----~~~~~~~gyv~Q~~~~~ 975 (1472)
..-++|+|++|+.||++.|||-||||||||+++|.++.. +..|+|.++|.++. . +-.++.+++|+|...++
T Consensus 41 vvGv~~~sl~v~~GeIfViMGLSGSGKSTLvR~~NrLie--pt~G~ilv~g~di~~~~~~~Lr~~Rr~~~sMVFQ~FaLl 118 (386)
T COG4175 41 VVGVNDASLDVEEGEIFVIMGLSGSGKSTLVRLLNRLIE--PTRGEILVDGKDIAKLSAAELRELRRKKISMVFQSFALL 118 (386)
T ss_pred EEeeccceeeecCCeEEEEEecCCCCHHHHHHHHhccCC--CCCceEEECCcchhcCCHHHHHHHHhhhhhhhhhhhccc
Confidence 346899999999999999999999999999999999887 46999999998753 2 22346789999999999
Q ss_pred CCCCHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 045902 976 PNVTIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1051 (1472)
Q Consensus 976 ~~lTv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTs 1051 (1472)
|+.||.||..|+..++. +.. +...+.++.+||.++.+.. ++.|||||||||.|||||+.+|+||+||||+|
T Consensus 119 PhrtVl~Nv~fGLev~Gv~~~er~~~a~~~l~~VgL~~~~~~y-----p~eLSGGMqQRVGLARAla~~~~IlLMDEaFS 193 (386)
T COG4175 119 PHRTVLENVAFGLEVQGVPKAEREERALEALELVGLEGYADKY-----PNELSGGMQQRVGLARALANDPDILLMDEAFS 193 (386)
T ss_pred cchhHhhhhhcceeecCCCHHHHHHHHHHHHHHcCchhhhhcC-----cccccchHHHHHHHHHHHccCCCEEEecCchh
Confidence 99999999999988764 333 3455667777777777665 35799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1052 GLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
+|||--+..+++.|.++.++ ++|||++|||.+ |.+.+-||+.+|+ +|+++..|++.+
T Consensus 194 ALDPLIR~~mQdeLl~Lq~~l~KTIvFitHDLd-EAlriG~rIaimk-dG~ivQ~Gtp~e 251 (386)
T COG4175 194 ALDPLIRTEMQDELLELQAKLKKTIVFITHDLD-EALRIGDRIAIMK-DGEIVQVGTPEE 251 (386)
T ss_pred hcChHHHHHHHHHHHHHHHHhCCeEEEEecCHH-HHHhccceEEEec-CCeEEEeCCHHH
Confidence 99999999999999998655 899999999987 6888999999997 589999998743
No 418
>PRK14267 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-33 Score=316.97 Aligned_cols=208 Identities=23% Similarity=0.341 Sum_probs=165.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCeeCCC--CC---CCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS--LRVSGRVTYCGHELTE--FV---PQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~--~~---~~~~~~yv~Q~d~~~ 259 (1472)
++|+|+|+.+++||+++|+||||||||||+++|+|.++++ ...+|+|+++|+++.. .. .++.++|++|++.++
T Consensus 18 ~~l~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~~ 97 (253)
T PRK14267 18 HVIKGVDLKIPQNGVFALMGPSGCGKSTLLRTFNRLLELNEEARVEGEVRLFGRNIYSPDVDPIEVRREVGMVFQYPNPF 97 (253)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCcccCCCCceEEEECCEEccccccChHHHhhceeEEecCCccC
Confidence 5899999999999999999999999999999999998762 1138999999998752 21 235799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc----cccc
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI----CADI 335 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt 335 (1472)
+.+||.||+.+.....+..... .+.+ ..++.+++.+||.. ..++
T Consensus 98 ~~~tv~enl~~~~~~~~~~~~~------------------~~~~--------------~~~~~~l~~~~l~~~~~~~~~~ 145 (253)
T PRK14267 98 PHLTIYDNVAIGVKLNGLVKSK------------------KELD--------------ERVEWALKKAALWDEVKDRLND 145 (253)
T ss_pred CCCcHHHHHHHHHHhcCccCCH------------------HHHH--------------HHHHHHHHHcCCccchhhhhcc
Confidence 9999999998764321110000 0000 01244667777642 2343
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
. ...|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++. ++.+++|+
T Consensus 146 ~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~~-~~~~~~d~ 217 (253)
T PRK14267 146 Y-----PSNLSGGQRQRLVIARALAMKPKILLMDEPTANIDPVGTAKIEELLFELKK--EYTIVLVTHSPA-QAARVSDY 217 (253)
T ss_pred C-----hhhCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhh--CCEEEEEECCHH-HHHhhCCE
Confidence 3 456999999999999999999999999999999999999999999999864 578888877654 67789999
Q ss_pred EEEecCCeEEEecChhHHH
Q 045902 416 IILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~ 434 (1472)
|++|++|++++.|+.+++.
T Consensus 218 i~~l~~G~i~~~~~~~~~~ 236 (253)
T PRK14267 218 VAFLYLGKLIEVGPTRKVF 236 (253)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999987763
No 419
>PRK14255 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.1e-32 Score=315.40 Aligned_cols=213 Identities=24% Similarity=0.349 Sum_probs=166.9
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--CC-eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--GG-YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~~-~~~G~i~i~G 953 (1472)
.+.++|+++.+. ++.+|+|+|++|++||++||+||||||||||+++|+|..+ +. +.+|+|.++|
T Consensus 5 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 71 (252)
T PRK14255 5 IITSSDVHLFYG-------------KFEALKGIDLDFNQNEITALIGPSGCGKSTYLRTLNRMNDLIPGVTITGNVSLRG 71 (252)
T ss_pred eEEEEeEEEEEC-------------CeeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcccEEEEcC
Confidence 366777776542 2469999999999999999999999999999999999753 21 2489999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-Cch----HHHHHHHHHccccc-ccccccCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-PKD----MFVEEVMELVEMKA-LRNSLVGLPGVDG 1022 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~~~----~~~~~v~~~l~l~~-~~~~~~~~~~~~~ 1022 (1472)
.++.. ...++.++|++|++.+++ .|++||+.+....+. ... ....+.++.+++.. +.+... ..+..
T Consensus 72 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~i~~~~~--~~~~~ 148 (252)
T PRK14255 72 QNIYAPNEDVVQLRKQVGMVFQQPNPFP-FSIYENVIYGLRLAGVKDKAVLDEAVETSLKQAAIWDEVKDHLH--ESALS 148 (252)
T ss_pred EEcccccccHHHhcCeEEEEECCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCccchhhHHh--cCccc
Confidence 87631 234567999999988887 699999987654332 111 22344556665531 111111 12357
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|++ |++
T Consensus 149 LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tii~vsH~~~-~~~~~~d~i~~l~~-G~i 225 (252)
T PRK14255 149 LSGGQQQRVCIARVLAVKPDVILLDEPTSALDPISSTQIENMLLELRD-QYTIILVTHSMH-QASRISDKTAFFLT-GNL 225 (252)
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEECCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999965 589999999976 46788999999985 788
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
+..|+.
T Consensus 226 ~~~~~~ 231 (252)
T PRK14255 226 IEFADT 231 (252)
T ss_pred EEeCCH
Confidence 888864
No 420
>cd03235 ABC_Metallic_Cations ABC component of the metal-type transporters. This family includes transporters involved in the uptake of various metallic cations such as iron, manganese, and zinc. The ATPases of this group of transporters are very similar to members of iron-siderophore uptake family suggesting that they share a common ancestor. The best characterized metal-type ABC transporters are the YfeABCD system of Y. pestis, the SitABCD system of Salmonella enterica serovar Typhimurium, and the SitABCD transporter of Shigella flexneri. Moreover other uncharacterized homologs of these metal-type transporters are mainly found in pathogens like Haemophilus or enteroinvasive E. coli isolates.
Probab=100.00 E-value=3.7e-33 Score=311.12 Aligned_cols=200 Identities=28% Similarity=0.422 Sum_probs=160.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCC--CCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHH--GEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~--~~lT 263 (1472)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|+++.. .++.++|++|++.+. +.+|
T Consensus 12 ~~~l~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~p~---~G~i~~~g~~~~~--~~~~i~~v~q~~~~~~~~~~t 86 (213)
T cd03235 12 HPVLEDVSFEVKPGEFLAIVGPNGAGKSTLLKAILGLLKPT---SGSIRVFGKPLEK--ERKRIGYVPQRRSIDRDFPIS 86 (213)
T ss_pred EEeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCccHHH--HHhheEEeccccccccCCCCc
Confidence 46999999999999999999999999999999999999887 8999999987642 345799999998663 3489
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.+....... . .. . ...+. ....+.+++.+||++..++.+++
T Consensus 87 v~e~l~~~~~~~~~-~-~~---~-----------~~~~~--------------~~~~~~~l~~~~l~~~~~~~~~~---- 132 (213)
T cd03235 87 VRDVVLMGLYGHKG-L-FR---R-----------LSKAD--------------KAKVDEALERVGLSELADRQIGE---- 132 (213)
T ss_pred HHHHHHhccccccc-c-cc---C-----------CCHHH--------------HHHHHHHHHHcCCHHHHhCCccc----
Confidence 99999875321100 0 00 0 00000 01135578889998777766654
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||||||+||+||+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++. ++.+++|++++|++|
T Consensus 133 -LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tvi~~sH~~~-~~~~~~d~i~~l~~~- 208 (213)
T cd03235 133 -LSGGQQQRVLLARALVQDPDLLLLDEPFAGVDPKTQEDIYELLRELRR-EGMTILVVTHDLG-LVLEYFDRVLLLNRT- 208 (213)
T ss_pred -CCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhcCEEEEEcCc-
Confidence 999999999999999999999999999999999999999999999876 5788888877654 677899999999886
Q ss_pred EEEec
Q 045902 424 IVYQG 428 (1472)
Q Consensus 424 iv~~G 428 (1472)
+++.|
T Consensus 209 ~~~~g 213 (213)
T cd03235 209 VVASG 213 (213)
T ss_pred EeecC
Confidence 66554
No 421
>PRK13638 cbiO cobalt transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=8.7e-33 Score=319.27 Aligned_cols=205 Identities=28% Similarity=0.344 Sum_probs=167.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-----CCceEEEEcCCCC-CC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-----PQRTCAYISQHDL-HH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~-~~ 259 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|.++|+ +|+|.++|+++.... .++.++|++|++. .+
T Consensus 14 ~~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~~ 90 (271)
T PRK13638 14 EPVLKGLNLDFSLSPVTGLVGANGCGKSTLFMNLSGLLRPQ---KGAVLWQGKPLDYSKRGLLALRQQVATVFQDPEQQI 90 (271)
T ss_pred cccccceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCCCC---ccEEEECCEEcccccCCHHHHHhheEEEeeChhhcc
Confidence 35899999999999999999999999999999999999987 899999999874211 1356999999875 34
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
...|+.||+.+.....+.. .. +.. ..++.+++.+||++..++.++
T Consensus 91 ~~~~~~~~l~~~~~~~~~~----------~~----------~~~--------------~~~~~~l~~~~l~~~~~~~~~- 135 (271)
T PRK13638 91 FYTDIDSDIAFSLRNLGVP----------EA----------EIT--------------RRVDEALTLVDAQHFRHQPIQ- 135 (271)
T ss_pred ccccHHHHHHHHHHHcCCC----------HH----------HHH--------------HHHHHHHHHcCCHhHhcCCch-
Confidence 5568999998753321110 00 000 013457888899877776665
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|
T Consensus 136 ----~LSgG~~qrl~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~g~tii~vtH~~-~~~~~~~d~i~~l 209 (271)
T PRK13638 136 ----CLSHGQKKRVAIAGALVLQARYLLLDEPTAGLDPAGRTQMIAIIRRIVA-QGNHVIISSHDI-DLIYEISDAVYVL 209 (271)
T ss_pred ----hCCHHHHHHHHHHHHHHcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 4999999999999999999999999999999999999999999999875 478888877665 4677899999999
Q ss_pred cCCeEEEecChhHHH
Q 045902 420 SEGEIVYQGPREYVL 434 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~ 434 (1472)
++|++++.|+.+++.
T Consensus 210 ~~G~i~~~g~~~~~~ 224 (271)
T PRK13638 210 RQGQILTHGAPGEVF 224 (271)
T ss_pred ECCEEEEeCCHHHHh
Confidence 999999999987763
No 422
>TIGR01842 type_I_sec_PrtD type I secretion system ABC transporter, PrtD family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.1e-32 Score=349.11 Aligned_cols=208 Identities=25% Similarity=0.364 Sum_probs=169.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|++++|||.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+++.
T Consensus 331 ~~~l~~~~~~i~~G~~~~ivG~sGsGKSTL~~ll~g~~~~~---~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~lf~~- 406 (544)
T TIGR01842 331 KPTLRGISFRLQAGEALAIIGPSGSGKSTLARLIVGIWPPT---SGSVRLDGADLKQWDRETFGKHIGYLPQDVELFPG- 406 (544)
T ss_pred ccccccceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEehhhCCHHHHhhheEEecCCcccccc-
Confidence 46899999999999999999999999999999999999998 8999999999877643 4689999999988865
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++||+.+.... .. ++++.+..+.+ ..+..++.+ ++..||.+| +.+
T Consensus 407 ti~~Ni~~~~~~---~~-------------------~~~~~~~~~~~---------~~~~~i~~l--~~gl~t~~~-~~g 452 (544)
T TIGR01842 407 TVAENIARFGEN---AD-------------------PEKIIEAAKLA---------GVHELILRL--PDGYDTVIG-PGG 452 (544)
T ss_pred cHHHHHhccCCC---CC-------------------HHHHHHHHHHh---------ChHHHHHhC--ccccccccC-CCc
Confidence 999999753210 00 01111111111 122334433 445688887 467
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
..||||||||++||||++.+|++++|||||+|||+.++..+.+.|+++.. .++|+|++.|++. ..+.+|+|++|++|
T Consensus 453 ~~LSgGq~qrl~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~~-~~~tvi~ith~~~--~~~~~d~i~~l~~G 529 (544)
T TIGR01842 453 ATLSGGQRQRIALARALYGDPKLVVLDEPNSNLDEEGEQALANAIKALKA-RGITVVVITHRPS--LLGCVDKILVLQDG 529 (544)
T ss_pred CCCCHHHHHHHHHHHHHhcCCCEEEEeCCccccCHHHHHHHHHHHHHHhh-CCCEEEEEeCCHH--HHHhCCEEEEEECC
Confidence 78999999999999999999999999999999999999999999998753 4789999888874 56789999999999
Q ss_pred eEEEecChhHHH
Q 045902 423 EIVYQGPREYVL 434 (1472)
Q Consensus 423 ~iv~~G~~~~~~ 434 (1472)
++++.|+++++.
T Consensus 530 ~i~~~g~~~~l~ 541 (544)
T TIGR01842 530 RIARFGERDEVL 541 (544)
T ss_pred EEEeeCCHHHHh
Confidence 999999998875
No 423
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=3.5e-33 Score=316.52 Aligned_cols=197 Identities=27% Similarity=0.381 Sum_probs=156.2
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++ .|
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 91 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYV--PENGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-RS 91 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-ch
Confidence 469999999999999999999999999999999999876 358999999987532 334567999999987764 69
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHccccccccccc-C-----CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 980 IYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLV-G-----LPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 980 v~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~-~-----~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
|.||+.+... ........+.++..++.++.+... + ...+..|||||||||+|||+|+.+|++|+|||||+||
T Consensus 92 v~~nl~~~~~--~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~~~~~~~LSgG~~qrv~laral~~~p~llllDEP~~~L 169 (237)
T cd03252 92 IRDNIALADP--GMSMERVIEAAKLAGAHDFISELPEGYDTIVGEQGAGLSGGQRQRIAIARALIHNPRILIFDEATSAL 169 (237)
T ss_pred HHHHhhccCC--CCCHHHHHHHHHHcCcHHHHHhCcccccchhhcCCCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccC
Confidence 9999976432 111222333344444333222110 0 1124589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1054 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+.++..+.+.|+++++ |+|||+++|+++. + +.+|++++|++ |++++.|+.
T Consensus 170 D~~~~~~l~~~l~~~~~-~~tiii~sH~~~~-~-~~~d~v~~l~~-G~i~~~~~~ 220 (237)
T cd03252 170 DYESEHAIMRNMHDICA-GRTVIIIAHRLST-V-KNADRIIVMEK-GRIVEQGSH 220 (237)
T ss_pred CHHHHHHHHHHHHHhcC-CCEEEEEeCCHHH-H-HhCCEEEEEEC-CEEEEEcCH
Confidence 99999999999999964 8999999999863 4 56999999985 789988875
No 424
>PRK03695 vitamin B12-transporter ATPase; Provisional
Probab=100.00 E-value=4.7e-33 Score=317.16 Aligned_cols=195 Identities=25% Similarity=0.378 Sum_probs=164.5
Q ss_pred eeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCCCHH
Q 045902 905 LLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNVTIY 981 (1472)
Q Consensus 905 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~lTv~ 981 (1472)
+|+||||++++||+++|+||||||||||+++|+|..+ .+|+|.++|.+... ...++.++|++|++.+++.+|+.
T Consensus 11 ~l~~vsl~i~~Gei~~l~G~nGsGKSTLl~~l~Gl~~---~~G~i~~~g~~i~~~~~~~~~~~i~~v~q~~~~~~~~tv~ 87 (248)
T PRK03695 11 RLGPLSAEVRAGEILHLVGPNGAGKSTLLARMAGLLP---GSGSIQFAGQPLEAWSAAELARHRAYLSQQQTPPFAMPVF 87 (248)
T ss_pred eecceEEEEcCCCEEEEECCCCCCHHHHHHHHcCCCC---CCeEEEECCEecCcCCHHHHhhheEEecccCccCCCccHH
Confidence 7999999999999999999999999999999999874 27999999987532 23345689999998888889999
Q ss_pred HHHHHHHHcCCCc---hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhh-------CCCCccccCCCC
Q 045902 982 ESLLYSAWLRLPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVA-------NPSIIFMDEPTS 1051 (1472)
Q Consensus 982 e~l~~~~~l~~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~-------~p~il~LDEPTs 1051 (1472)
||+.+......+. ...++++++.+++.+..++.. ..||||||||++||++|+. +|++|+|||||+
T Consensus 88 ~nl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~la~al~~~~~~~~p~p~llllDEPt~ 162 (248)
T PRK03695 88 QYLTLHQPDKTRTEAVASALNEVAEALGLDDKLGRSV-----NQLSGGEWQRVRLAAVVLQVWPDINPAGQLLLLDEPMN 162 (248)
T ss_pred HHHHhcCccCCCcHHHHHHHHHHHHHcCCHhHhcCCc-----ccCCHHHHHHHHHHHHHhccccccCCCCCEEEEcCCcc
Confidence 9998753222222 134677888888876555543 4799999999999999997 679999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1052 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
|||+.++..+.+.|++++++|.|||++||+++ ++.+.+|++++|++ |+++..|+..
T Consensus 163 ~LD~~~~~~l~~~L~~~~~~~~tvi~~sH~~~-~~~~~~d~i~~l~~-G~i~~~g~~~ 218 (248)
T PRK03695 163 SLDVAQQAALDRLLSELCQQGIAVVMSSHDLN-HTLRHADRVWLLKQ-GKLLASGRRD 218 (248)
T ss_pred cCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEEECCHH
Confidence 99999999999999999877999999999976 47788999999985 7898888753
No 425
>PRK09984 phosphonate/organophosphate ester transporter subunit; Provisional
Probab=100.00 E-value=6.2e-33 Score=319.11 Aligned_cols=216 Identities=24% Similarity=0.308 Sum_probs=171.8
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC--------CCceEEEEcCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV--------PQRTCAYISQHDL 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~--------~~~~~~yv~Q~d~ 257 (1472)
+.+|+|+|+.+++||+++|+||||||||||+++|+|.++|+...+|+|.++|+++.... .++.++|++|++.
T Consensus 17 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~~~~q~~~ 96 (262)
T PRK09984 17 HQALHAVDLNIHHGEMVALLGPSGSGKSTLLRHLSGLITGDKSAGSHIELLGRTVQREGRLARDIRKSRANTGYIFQQFN 96 (262)
T ss_pred eEEEecceEEEcCCcEEEEECCCCCCHHHHHHHHhccCCCCCCCceEEEECCEecccccccchhHHHHHhheEEEccccc
Confidence 35999999999999999999999999999999999999875223699999999875421 1346999999999
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMV 337 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 337 (1472)
+++.+||+||+.+....... ..... ... ..++. ...++.+++.+||++..|+.+
T Consensus 97 ~~~~~tv~e~l~~~~~~~~~---------~~~~~--~~~-~~~~~--------------~~~~~~~l~~~~l~~~~~~~~ 150 (262)
T PRK09984 97 LVNRLSVLENVLIGALGSTP---------FWRTC--FSW-FTREQ--------------KQRALQALTRVGMVHFAHQRV 150 (262)
T ss_pred cccCCcHHHHHHhhhccccc---------chhhh--ccc-ccHHH--------------HHHHHHHHHHcCCHHHHhCCc
Confidence 99999999999875321000 00000 000 00000 012356788999987777766
Q ss_pred cCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEE
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDII 417 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ii 417 (1472)
++ |||||||||+|||||+.+|++|+|||||+|||..++..+.+.|+++++..+.|+|++.|++. ++.+++|+++
T Consensus 151 ~~-----LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~g~tvii~tH~~~-~~~~~~d~i~ 224 (262)
T PRK09984 151 ST-----LSGGQQQRVAIARALMQQAKVILADEPIASLDPESARIVMDTLRDINQNDGITVVVTLHQVD-YALRYCERIV 224 (262)
T ss_pred cc-----cCHHHHHHHHHHHHHhcCCCEEEecCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhCCEEE
Confidence 54 99999999999999999999999999999999999999999999998656789888887653 6778999999
Q ss_pred EecCCeEEEecChhHH
Q 045902 418 LLSEGEIVYQGPREYV 433 (1472)
Q Consensus 418 lL~~G~iv~~G~~~~~ 433 (1472)
+|++|++++.|+++++
T Consensus 225 ~l~~g~i~~~g~~~~~ 240 (262)
T PRK09984 225 ALRQGHVFYDGSSQQF 240 (262)
T ss_pred EEECCEEEEeCCHHHh
Confidence 9999999999998764
No 426
>TIGR00630 uvra excinuclease ABC, A subunit. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=100.00 E-value=1.3e-31 Score=346.20 Aligned_cols=123 Identities=21% Similarity=0.295 Sum_probs=99.1
Q ss_pred CCCHHHHHHHHHHcCCCchHHHHHHHHHcccccc-cccccCCCCCCCCCHHHHHHHHHHHHHhh---CCCCccccCCCCC
Q 045902 977 NVTIYESLLYSAWLRLPKDMFVEEVMELVEMKAL-RNSLVGLPGVDGLSTEQRKRLTIAVELVA---NPSIIFMDEPTSG 1052 (1472)
Q Consensus 977 ~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~-~~~~~~~~~~~~LSgGqrqRl~iA~aL~~---~p~il~LDEPTsg 1052 (1472)
.+||.|.+.|...+.. -....++++.++|..+ .++. ...|||||+||+.||++|+. +|++++|||||+|
T Consensus 789 ~~tv~e~~~f~~~~~~--i~~~l~~L~~~gL~~l~l~~~-----~~tLSgGe~QRl~LA~aL~~~~~~p~llILDEPtsg 861 (924)
T TIGR00630 789 DMTVEEAYEFFEAVPS--ISRKLQTLCDVGLGYIKLGQP-----ATTLSGGEAQRIKLAKELSKRSTGRTLYILDEPTTG 861 (924)
T ss_pred CCcHHHHHHHHHhccc--hhHHHHHHHHcCCCchhhcCc-----cccCCHHHHHHHHHHHHHhhcCCCCCEEEEECCCCC
Confidence 5677788777654321 1234467777777543 2332 35799999999999999997 5999999999999
Q ss_pred CCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEe-----cCcEEEEEcCC
Q 045902 1053 LDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMK-----RGGHVIYAGPL 1108 (1472)
Q Consensus 1053 LD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~-----~gg~v~~~g~~ 1108 (1472)
||+.....+++.|+++.++|.|||+++|+++ ..+.+|+++.|. +||++++.|+.
T Consensus 862 LD~~~~~~L~~~L~~l~~~G~TVIvi~H~~~--~i~~aD~ii~Lgp~~G~~gG~iv~~G~~ 920 (924)
T TIGR00630 862 LHFDDIKKLLEVLQRLVDQGNTVVVIEHNLD--VIKTADYIIDLGPEGGDGGGTIVASGTP 920 (924)
T ss_pred CCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH--HHHhCCEEEEecCCccCCCCEEEEeCCH
Confidence 9999999999999999888999999999975 446799999994 57899999875
No 427
>PRK14243 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.7e-33 Score=318.83 Aligned_cols=215 Identities=21% Similarity=0.262 Sum_probs=168.8
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~G 953 (1472)
.+.++|+++.+. +..+|+|+|++|++||++||+||||||||||+++|+|...+. +.+|+|.++|
T Consensus 10 ~l~i~~v~~~~~-------------~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g 76 (264)
T PRK14243 10 VLRTENLNVYYG-------------SFLAVKNVWLDIPKNQITAFIGPSGCGKSTILRCFNRLNDLIPGFRVEGKVTFHG 76 (264)
T ss_pred EEEEeeeEEEEC-------------CEEEeecceEEEcCCCEEEEECCCCCCHHHHHHHHHhhhcccCCCCCceEEEECC
Confidence 467788776542 246999999999999999999999999999999999975321 2589999999
Q ss_pred ccCC-----hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-C--chHHHHHHHHHcccccccccccCCCCCCCCCH
Q 045902 954 YPKK-----QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-P--KDMFVEEVMELVEMKALRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 954 ~~~~-----~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~--~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSg 1025 (1472)
.++. ...+++.++|++|++.+++ .|+.||+.+....+. . .++.++++++.+++.+..+.... ..+..|||
T Consensus 77 ~~i~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LSg 154 (264)
T PRK14243 77 KNLYAPDVDPVEVRRRIGMVFQKPNPFP-KSIYDNIAYGARINGYKGDMDELVERSLRQAALWDEVKDKLK-QSGLSLSG 154 (264)
T ss_pred EEccccccChHHHhhhEEEEccCCcccc-ccHHHHHHhhhhhcCcchHHHHHHHHHHHHhCchhhHHHHhc-CCcccCCH
Confidence 8752 1234567999999988877 499999987654321 1 11334555666666321111111 12457999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEec-------
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKR------- 1098 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~------- 1098 (1472)
|||||++|||||+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.||++++|++
T Consensus 155 Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~-~~tvi~vtH~~~-~~~~~~d~v~~l~~~~~~~~~ 232 (264)
T PRK14243 155 GQQQRLCIARAIAVQPEVILMDEPCSALDPISTLRIEELMHELKE-QYTIIIVTHNMQ-QAARVSDMTAFFNVELTEGGG 232 (264)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc-CCEEEEEecCHH-HHHHhCCEEEEEecccccccc
Confidence 999999999999999999999999999999999999999999976 589999999986 57889999999972
Q ss_pred -CcEEEEEcCC
Q 045902 1099 -GGHVIYAGPL 1108 (1472)
Q Consensus 1099 -gg~v~~~g~~ 1108 (1472)
.|+++..|+.
T Consensus 233 ~~g~i~~~~~~ 243 (264)
T PRK14243 233 RYGYLVEFDRT 243 (264)
T ss_pred cCceEEEeCCH
Confidence 4799998875
No 428
>cd03213 ABCG_EPDR ABCG transporters are involved in eye pigment (EP) precursor transport, regulation of lipid-trafficking mechanisms, and pleiotropic drug resistance (DR). DR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. Compared to other members of the ABC transporter subfamilies, the ABCG transporter family is composed of proteins that have an ATP-binding cassette domain at the N-terminus and a TM (transmembrane) domain at the C-terminus.
Probab=100.00 E-value=1.3e-32 Score=301.88 Aligned_cols=171 Identities=42% Similarity=0.731 Sum_probs=152.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCC--CCCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKS--DKSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~--~~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 263 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|.+ ++. +|+|.++|+++.....++.++|++|++.+++.+|
T Consensus 22 ~~~l~~~~~~i~~Ge~~~l~G~nGsGKStLl~~i~Gl~~~~~~---~G~i~~~g~~~~~~~~~~~i~~~~q~~~~~~~~t 98 (194)
T cd03213 22 KQLLKNVSGKAKPGELTAIMGPSGAGKSTLLNALAGRRTGLGV---SGEVLINGRPLDKRSFRKIIGYVPQDDILHPTLT 98 (194)
T ss_pred ccceecceEEEcCCcEEEEECCCCCCHHHHHHHHhCCCCCCCC---ceEEEECCEeCchHhhhheEEEccCcccCCCCCc
Confidence 46999999999999999999999999999999999999 776 8999999998865333567999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
++||+.+..++ .
T Consensus 99 ~~~~i~~~~~~--------------------------------------------------------------------~ 110 (194)
T cd03213 99 VRETLMFAAKL--------------------------------------------------------------------R 110 (194)
T ss_pred HHHHHHHHHHh--------------------------------------------------------------------c
Confidence 99999653110 0
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
.||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++++ .++|+|++.|++..++.+.+|++++|++|+
T Consensus 111 ~LS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiii~sh~~~~~~~~~~d~v~~l~~G~ 189 (194)
T cd03213 111 GLSGGERKRVSIALELVSNPSLLFLDEPTSGLDSSSALQVMSLLRRLAD-TGRTIICSIHQPSSEIFELFDKLLLLSQGR 189 (194)
T ss_pred cCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHh-CCCEEEEEecCchHHHHHhcCEEEEEeCCE
Confidence 3999999999999999999999999999999999999999999999865 488999999988767888999999999999
Q ss_pred EEEec
Q 045902 424 IVYQG 428 (1472)
Q Consensus 424 iv~~G 428 (1472)
+++.|
T Consensus 190 i~~~~ 194 (194)
T cd03213 190 VIYFG 194 (194)
T ss_pred EEecC
Confidence 98765
No 429
>cd03220 ABC_KpsT_Wzt ABC_KpsT_Wzt The KpsT/Wzt ABC transporter subfamily is involved in extracellular polysaccharide export. Among the variety of membrane-linked or extracellular polysaccharides excreted by bacteria, only capsular polysaccharides, lipopolysaccharides, and teichoic acids have been shown to be exported by ABC transporters. A typical system is made of a conserved integral membrane and an ABC. In addition to these proteins, capsular polysaccharide exporter systems require two 'accessory' proteins to perform their function: a periplasmic (E.coli) or a lipid-anchored outer membrane protein called OMA (Neisseria meningitidis and Haemophilus influenzae) and a cytoplasmic membrane protein MPA2.
Probab=100.00 E-value=5.8e-33 Score=311.54 Aligned_cols=190 Identities=26% Similarity=0.382 Sum_probs=155.5
Q ss_pred ccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCC
Q 045902 899 EENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 899 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~l 978 (1472)
.++++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+...+.+.+
T Consensus 31 ~~~~~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--p~~G~i~~~g~~~~~---------~~~~~~~~~~~ 99 (224)
T cd03220 31 EVGEFWALKDVSFEVPRGERIGLIGRNGAGKSTLLRLLAGIYP--PDSGTVTVRGRVSSL---------LGLGGGFNPEL 99 (224)
T ss_pred hcCCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEchh---------hcccccCCCCC
Confidence 4556789999999999999999999999999999999999876 458999999976421 11123345679
Q ss_pred CHHHHHHHHHHcCC-Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCC
Q 045902 979 TIYESLLYSAWLRL-PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLD 1054 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~-~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD 1054 (1472)
||+||+.+...... ... ...+++++.+++.+..++.+ ..||||||||++|||+|+.+|++|+|||||+|||
T Consensus 100 tv~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgG~~qrv~laral~~~p~llllDEP~~gLD 174 (224)
T cd03220 100 TGRENIYLNGRLLGLSRKEIDEKIDEIIEFSELGDFIDLPV-----KTYSSGMKARLAFAIATALEPDILLIDEVLAVGD 174 (224)
T ss_pred cHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCChhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCC
Confidence 99999987654321 112 24566777788776666543 4799999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1055 ARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1055 ~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
+.++..+.+.|++++++|+|||+++|+++ ++.+.+|++++|.+ |+++..|
T Consensus 175 ~~~~~~~~~~l~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~-G~i~~~g 224 (224)
T cd03220 175 AAFQEKCQRRLRELLKQGKTVILVSHDPS-SIKRLCDRALVLEK-GKIRFDG 224 (224)
T ss_pred HHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEecC
Confidence 99999999999999877899999999976 46678999999985 7887654
No 430
>PRK10744 pstB phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=314.76 Aligned_cols=206 Identities=20% Similarity=0.292 Sum_probs=162.5
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCeeCCCC--C---CCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD--KSLRVSGRVTYCGHELTEF--V---PQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 259 (1472)
.+|+|+|+.+++||+++|+||||||||||+++|+|.++ |....+|+|.++|+++... . .++.++|++|++.++
T Consensus 27 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~p~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 106 (260)
T PRK10744 27 HALKNINLDIAKNQVTAFIGPSGCGKSTLLRTFNRMYELYPEQRAEGEILLDGENILTPKQDIALLRAKVGMVFQKPTPF 106 (260)
T ss_pred EEeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccccCCCCCcceEEEECCEEccccccchHHHhcceEEEecCCccC
Confidence 58999999999999999999999999999999999986 2111389999999987531 1 135799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc----ccccc
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD----ICADI 335 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 335 (1472)
+ +||+||+.+......... .. +.+ ..++.+++.+||. +..+.
T Consensus 107 ~-~tv~~nl~~~~~~~~~~~---------~~----------~~~--------------~~~~~~l~~~~l~~~~~~~~~~ 152 (260)
T PRK10744 107 P-MSIYDNIAFGVRLFEKLS---------RA----------EMD--------------ERVEWALTKAALWNEVKDKLHQ 152 (260)
T ss_pred c-CcHHHHHhhhHhhcCCCC---------HH----------HHH--------------HHHHHHHHHcCCChhhHHHHhc
Confidence 7 899999987643211000 00 000 0134466777764 22343
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
. ...|||||||||+||+||+.+|++++|||||+|||..++..+.+.|+++.+ +.|+|++.|++ .++.+++|+
T Consensus 153 ~-----~~~LS~Gq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~~tiii~sH~~-~~~~~~~d~ 224 (260)
T PRK10744 153 S-----GYSLSGGQQQRLCIARGIAIRPEVLLLDEPCSALDPISTGRIEELITELKQ--DYTVVIVTHNM-QQAARCSDY 224 (260)
T ss_pred C-----CCCCCHHHHHHHHHHHHHHCCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCH-HHHHHhCCE
Confidence 3 445999999999999999999999999999999999999999999999853 57888877765 467789999
Q ss_pred EEEecCCeEEEecChhHHH
Q 045902 416 IILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~ 434 (1472)
+++|++|+++..|+.+++.
T Consensus 225 i~~l~~G~i~~~g~~~~~~ 243 (260)
T PRK10744 225 TAFMYLGELIEFGNTDTIF 243 (260)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999988764
No 431
>PRK09700 D-allose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-33 Score=351.26 Aligned_cols=212 Identities=25% Similarity=0.313 Sum_probs=175.6
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.+ +++.+|+||||+|++||++||+||||||||||+++|+|..+ +.+|+|.++|.++
T Consensus 5 ~l~~~~l~~~~-------------~~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~i~Gl~~--p~~G~i~~~g~~i 69 (510)
T PRK09700 5 YISMAGIGKSF-------------GPVHALKSVNLTVYPGEIHALLGENGAGKSTLMKVLSGIHE--PTKGTITINNINY 69 (510)
T ss_pred eEEEeeeEEEc-------------CCeEEeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCcC--CCccEEEECCEEC
Confidence 36677776654 23569999999999999999999999999999999999876 3589999999876
Q ss_pred Chh----cccceeEEeccCCCCCCCCCHHHHHHHHHHc----CC----Cc---hHHHHHHHHHcccccccccccCCCCCC
Q 045902 957 KQE----TFARISGYCEQNDIHSPNVTIYESLLYSAWL----RL----PK---DMFVEEVMELVEMKALRNSLVGLPGVD 1021 (1472)
Q Consensus 957 ~~~----~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l----~~----~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~ 1021 (1472)
... ..++.+||++|++.+++.+||+|++.+.... .. +. ...++++++.+++.+..++.+ .
T Consensus 70 ~~~~~~~~~~~~i~~v~q~~~~~~~~tv~e~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~ 144 (510)
T PRK09700 70 NKLDHKLAAQLGIGIIYQELSVIDELTVLENLYIGRHLTKKVCGVNIIDWREMRVRAAMMLLRVGLKVDLDEKV-----A 144 (510)
T ss_pred CCCCHHHHHHCCeEEEeecccccCCCcHHHHhhhccccccccccccccCHHHHHHHHHHHHHHcCCCCCcccch-----h
Confidence 421 1235689999999999999999999875321 11 11 134567888888876666554 4
Q ss_pred CCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcE
Q 045902 1022 GLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGH 1101 (1472)
Q Consensus 1022 ~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~ 1101 (1472)
.|||||||||+||++|+.+|++|+|||||+|||+.++..+++.|++++++|+|||++||+++ .+.+.||++++|++ |+
T Consensus 145 ~LSgG~~qrv~ia~al~~~p~lllLDEPt~~LD~~~~~~l~~~l~~l~~~g~tiiivsHd~~-~~~~~~d~v~~l~~-G~ 222 (510)
T PRK09700 145 NLSISHKQMLEIAKTLMLDAKVIIMDEPTSSLTNKEVDYLFLIMNQLRKEGTAIVYISHKLA-EIRRICDRYTVMKD-GS 222 (510)
T ss_pred hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CE
Confidence 79999999999999999999999999999999999999999999999888999999999976 46678999999985 78
Q ss_pred EEEEcCCCc
Q 045902 1102 VIYAGPLGR 1110 (1472)
Q Consensus 1102 v~~~g~~~~ 1110 (1472)
+++.|+..+
T Consensus 223 i~~~g~~~~ 231 (510)
T PRK09700 223 SVCSGMVSD 231 (510)
T ss_pred Eeeecchhh
Confidence 889887653
No 432
>PRK14251 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.8e-33 Score=315.98 Aligned_cols=214 Identities=24% Similarity=0.327 Sum_probs=168.2
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC--C-eeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG--G-YIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~--~-~~~G~i~i~G 953 (1472)
.+.++|+++.+. .+.+|+|+|++|++||++||+|+||||||||+++|+|..++ . +.+|+|.++|
T Consensus 4 ~l~~~~l~~~~~-------------~~~~l~~~sl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~v~i~g 70 (251)
T PRK14251 4 IISAKDVHLSYG-------------NYEALHGISLDFEEKELTALIGPSGCGKSTFLRCLNRMNDDIENIKITGEIKFEG 70 (251)
T ss_pred eEEEEeeEEEEC-------------CeeeeeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhhccccccCCCcceEEEECC
Confidence 366778776542 24699999999999999999999999999999999998642 1 2589999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC-C-ch---HHHHHHHHHcccccccccccCCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL-P-KD---MFVEEVMELVEMKALRNSLVGLPGVDGL 1023 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-~-~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~L 1023 (1472)
.+... ...++.++|++|++.+++ .|++||+.+...... . .+ ..++++++.+++........ ......|
T Consensus 71 ~~~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-~~~~~~L 148 (251)
T PRK14251 71 QNIYGSKMDLVELRKEVGMVFQQPTPFP-FSVYDNVAYGLKIAGVKDKELIDQRVEESLKQAAIWKETKDNL-DRNAQAF 148 (251)
T ss_pred EEcccccchHHHhhccEEEEecCCccCC-CcHHHHHHHHHHHcCCCCHHHHHHHHHHHHHHcCCCcchHHHh-ccChhhC
Confidence 87532 234567999999988776 799999987543221 1 11 23556677777632100011 1124579
Q ss_pred CHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEE
Q 045902 1024 STEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVI 1103 (1472)
Q Consensus 1024 SgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~ 1103 (1472)
|||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++.+ +.|||++||+++ ++.+.+|++++|++ |+++
T Consensus 149 S~Gq~qr~~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~tiiiisH~~~-~~~~~~d~i~~l~~-G~i~ 225 (251)
T PRK14251 149 SGGQQQRICIARALAVRPKVVLLDEPTSALDPISSSEIEETLMELKH-QYTFIMVTHNLQ-QAGRISDQTAFLMN-GDLI 225 (251)
T ss_pred CHHHHHHHHHHHHHhcCCCEEEecCCCccCCHHHHHHHHHHHHHHHc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CEEE
Confidence 99999999999999999999999999999999999999999999864 799999999976 46778999999985 7888
Q ss_pred EEcCC
Q 045902 1104 YAGPL 1108 (1472)
Q Consensus 1104 ~~g~~ 1108 (1472)
..|+.
T Consensus 226 ~~~~~ 230 (251)
T PRK14251 226 EAGPT 230 (251)
T ss_pred EeCCH
Confidence 88874
No 433
>PRK11231 fecE iron-dicitrate transporter ATP-binding subunit; Provisional
Probab=100.00 E-value=6e-33 Score=317.95 Aligned_cols=208 Identities=26% Similarity=0.382 Sum_probs=170.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+.+|+|+|+++++|++++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|+..+++.+
T Consensus 15 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 91 (255)
T PRK11231 15 KRILNDLSLSLPTGKITALIGPNGCGKSTLLKCFARLLTPQ---SGTVFLGDKPISMLSSRQLARRLALLPQHHLTPEGI 91 (255)
T ss_pred EEEEeeeeeEEcCCcEEEEECCCCCCHHHHHHHHhCCcCCC---CcEEEECCEEhHHCCHHHHhhheEEecccCCCCCCc
Confidence 46999999999999999999999999999999999999887 8999999998754322 35699999999888889
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||.||+.++..... ... +..+ .+. ....+.+++.+||++..|+.++
T Consensus 92 tv~~~i~~~~~~~~-----~~~----------~~~~-~~~--------------~~~~~~~l~~~~l~~~~~~~~~---- 137 (255)
T PRK11231 92 TVRELVAYGRSPWL-----SLW----------GRLS-AED--------------NARVNQAMEQTRINHLADRRLT---- 137 (255)
T ss_pred cHHHHHHhccchhh-----hhc----------cCCC-HHH--------------HHHHHHHHHHcCCHHHHcCCcc----
Confidence 99999987531000 000 0000 000 0113457888899877777665
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
.|||||||||+||+|++.+|++|+|||||+|||+.++..+.+.|+++++ .+.|+|++.|++. ++.+++|++++|++|
T Consensus 138 -~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~l~~-~~~tiii~tH~~~-~~~~~~d~i~~l~~G 214 (255)
T PRK11231 138 -DLSGGQRQRAFLAMVLAQDTPVVLLDEPTTYLDINHQVELMRLMRELNT-QGKTVVTVLHDLN-QASRYCDHLVVLANG 214 (255)
T ss_pred -cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHH-CCCEEEEEECCHH-HHHHhcCEEEEEECC
Confidence 4999999999999999999999999999999999999999999999875 4788888887654 778899999999999
Q ss_pred eEEEecChhHH
Q 045902 423 EIVYQGPREYV 433 (1472)
Q Consensus 423 ~iv~~G~~~~~ 433 (1472)
++++.|+.+++
T Consensus 215 ~i~~~~~~~~~ 225 (255)
T PRK11231 215 HVMAQGTPEEV 225 (255)
T ss_pred eEEEEcCHHHh
Confidence 99999998765
No 434
>COG4604 CeuD ABC-type enterochelin transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.4e-34 Score=294.87 Aligned_cols=203 Identities=26% Similarity=0.422 Sum_probs=178.2
Q ss_pred ccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCC
Q 045902 899 EENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHS 975 (1472)
Q Consensus 899 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~ 975 (1472)
.++.+.+|+++|..|++|.+|+|+|||||||||||.+++++.+ ..+|+|.++|.++.. ...++.++..-|+....
T Consensus 10 ~y~~~~vl~~isl~i~~g~iTs~IGPNGAGKSTLLS~~sRL~~--~d~G~i~i~g~~~~~~~s~~LAk~lSILkQ~N~i~ 87 (252)
T COG4604 10 SYGTKVVLDDVSLDIPKGGITSIIGPNGAGKSTLLSMMSRLLK--KDSGEITIDGLELTSTPSKELAKKLSILKQENHIN 87 (252)
T ss_pred hhCCEEeeccceeeecCCceeEEECCCCccHHHHHHHHHHhcc--ccCceEEEeeeecccCChHHHHHHHHHHHhhchhh
Confidence 3567889999999999999999999999999999999999876 458999999998643 45677788899998888
Q ss_pred CCCCHHHHHHHHHHc----CCCc--hHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCC
Q 045902 976 PNVTIYESLLYSAWL----RLPK--DMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEP 1049 (1472)
Q Consensus 976 ~~lTv~e~l~~~~~l----~~~~--~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEP 1049 (1472)
..+||+|-+.|+..- |+.. ...++++++.++|.+++|+.. ..||||||||.-||+.|+.+.+.++||||
T Consensus 88 ~rlTV~dLv~FGRfPYSqGRlt~eD~~~I~~aieyl~L~~l~dryL-----d~LSGGQrQRAfIAMVlaQdTdyvlLDEP 162 (252)
T COG4604 88 SRLTVRDLVGFGRFPYSQGRLTKEDRRIINEAIEYLHLEDLSDRYL-----DELSGGQRQRAFIAMVLAQDTDYVLLDEP 162 (252)
T ss_pred heeEHHHHhhcCCCcccCCCCchHHHHHHHHHHHHhcccchHHHhH-----HhcccchhhhhhhheeeeccCcEEEecCc
Confidence 899999999987432 2222 256899999999999999875 47999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1050 TSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1050 TsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
.++||...+..+|+.||+++++ |+|||++.||.+. .-.+.|+++.|++ |+++..|++++
T Consensus 163 LNNLDmkHsv~iMk~Lrrla~el~KtiviVlHDINf-AS~YsD~IVAlK~-G~vv~~G~~~e 222 (252)
T COG4604 163 LNNLDMKHSVQIMKILRRLADELGKTIVVVLHDINF-ASCYSDHIVALKN-GKVVKQGSPDE 222 (252)
T ss_pred ccccchHHHHHHHHHHHHHHHHhCCeEEEEEecccH-HHhhhhheeeecC-CEEEecCCHHH
Confidence 9999999999999999999977 9999999999875 5567899999985 89999999864
No 435
>TIGR02982 heterocyst_DevA ABC exporter ATP-binding subunit, DevA family. Members of this protein family are found mostly in the Cyanobacteria, but also in the Planctomycetes. Cyanobacterial examples are involved in heterocyst formation, by which some fraction of members of the colony undergo a developmental change and become capable of nitrogen fixation. The DevBCA proteins are thought export of either heterocyst-specific glycolipids or an enzyme essential for formation of the laminated layer found in heterocysts.
Probab=100.00 E-value=1.9e-32 Score=306.85 Aligned_cols=196 Identities=29% Similarity=0.420 Sum_probs=164.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHDLHH 259 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d~~~ 259 (1472)
+.+|+|+|+++++|++++|+||||||||||+++|+|.++++ +|+|.++|+++....+ ++.++|++|++.++
T Consensus 18 ~~il~~vs~~i~~G~~~~I~G~nGsGKStLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~i~~~~q~~~~~ 94 (220)
T TIGR02982 18 KQVLFDINLEINPGEIVILTGPSGSGKTTLLTLIGGLRSVQ---EGSLKVLGQELYGASEKELVQLRRNIGYIFQAHNLL 94 (220)
T ss_pred eeEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CeEEEECCEEhHhcCHhHHHHHHhheEEEcCChhhc
Confidence 56999999999999999999999999999999999999887 8999999998764332 35799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+.+|+.||+.++...... .... +. ...++.+++.+||.+..++.+.
T Consensus 95 ~~~t~~~n~~~~~~~~~~---------~~~~----------~~--------------~~~~~~~l~~~~l~~~~~~~~~- 140 (220)
T TIGR02982 95 GFLTARQNVQMALELQPN---------LSYQ----------EA--------------RERARAMLEAVGLGDHLDYYPH- 140 (220)
T ss_pred CCCCHHHHHHHHHHhccC---------CCHH----------HH--------------HHHHHHHHHHcCChhhhhcChh-
Confidence 999999999886432110 0000 00 0023557889999877776654
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.||||||||++||++|+.+|++++|||||+|||+.++..+.+.|+++.+..++|+|++.|++. ..+.+|+|++|
T Consensus 141 ----~lS~G~~qrv~laral~~~p~illlDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~~sh~~~--~~~~~d~v~~l 214 (220)
T TIGR02982 141 ----NLSGGQKQRVAIARALVHRPKLVLADEPTAALDSKSGRDVVELMQKLAREQGCTILIVTHDNR--ILDVADRIVHM 214 (220)
T ss_pred ----hCCHHHHHHHHHHHHHhcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHHHcCCEEEEEeCCHH--HHhhCCEEEEE
Confidence 599999999999999999999999999999999999999999999987656899999988874 56899999999
Q ss_pred cCCeE
Q 045902 420 SEGEI 424 (1472)
Q Consensus 420 ~~G~i 424 (1472)
++|++
T Consensus 215 ~~g~~ 219 (220)
T TIGR02982 215 EDGKL 219 (220)
T ss_pred ECCEE
Confidence 99986
No 436
>TIGR01166 cbiO cobalt transport protein ATP-binding subunit. This model describes the ATP binding subunit of the multisubunit cobalt transporter in bacteria and its equivalents in archaea. The model is restricted to ATP subunit that is a part of the cobalt transporter, which belongs to the ABC transporter superfamily (ATP Binding Cassette). The model excludes ATP binding subunit that are associated with other transporters belonging to ABC transporter superfamily. This superfamily includes two groups, one which catalyze the uptake of small molecules, including ions from the external milieu and the other group which is engaged in the efflux of small molecular weight compounds and ions from within the cell. Energy derived from the hydrolysis of ATP drive the both the process of uptake and efflux.
Probab=100.00 E-value=3.9e-33 Score=305.27 Aligned_cols=175 Identities=26% Similarity=0.346 Sum_probs=146.2
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeEEeccCCC-CC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-----ETFARISGYCEQNDI-HS 975 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-----~~~~~~~gyv~Q~~~-~~ 975 (1472)
++.+|+|||++|++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++. ..
T Consensus 4 ~~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 81 (190)
T TIGR01166 4 GPEVLKGLNFAAERGEVLALLGANGAGKSTLLLHLNGLLR--PQSGAVLIDGEPLDYSRKGLLERRQRVGLVFQDPDDQL 81 (190)
T ss_pred ccceecceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceeEEECCEEccccccchHHHHhhEEEEecChhhcc
Confidence 3569999999999999999999999999999999999876 358999999987531 134567899999973 33
Q ss_pred CCCCHHHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCC
Q 045902 976 PNVTIYESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTS 1051 (1472)
Q Consensus 976 ~~lTv~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTs 1051 (1472)
...|++||+.+..... .+.+ ..++++++.+++.+..++.. ..||||||||++|||||+.+|++|+|||||+
T Consensus 82 ~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~ 156 (190)
T TIGR01166 82 FAADVDQDVAFGPLNLGLSEAEVERRVREALTAVGASGLRERPT-----HCLSGGEKKRVAIAGAVAMRPDVLLLDEPTA 156 (190)
T ss_pred ccccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHcCchhhhhCCh-----hhCCHHHHHHHHHHHHHhcCCCEEEEcCCcc
Confidence 3579999998865432 2222 34567788888876666543 4799999999999999999999999999999
Q ss_pred CCCHHHHHHHHHHHHHHhhCCCEEEEEecCcc
Q 045902 1052 GLDARAAAIVMRTVRNTVDTGRTVVCTIHQPS 1083 (1472)
Q Consensus 1052 gLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~ 1083 (1472)
|||+.++..+.+.|++++++|+|||++||+++
T Consensus 157 ~LD~~~~~~~~~~l~~~~~~~~tili~sH~~~ 188 (190)
T TIGR01166 157 GLDPAGREQMLAILRRLRAEGMTVVISTHDVD 188 (190)
T ss_pred cCCHHHHHHHHHHHHHHHHcCCEEEEEeeccc
Confidence 99999999999999999877999999999864
No 437
>cd03229 ABC_Class3 This class is comprised of all BPD (Binding Protein Dependent) systems that are largely represented in archaea and eubacteria and are primarily involved in scavenging solutes from the environment. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=4.2e-33 Score=301.61 Aligned_cols=159 Identities=31% Similarity=0.441 Sum_probs=142.8
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh-----hcccceeEEeccCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ-----ETFARISGYCEQNDIHSPN 977 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~-----~~~~~~~gyv~Q~~~~~~~ 977 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|++.+++.
T Consensus 13 ~~~l~~i~~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~~ 90 (178)
T cd03229 13 KTVLNDVSLNIEAGEIVALLGPSGSGKSTLLRCIAGLEE--PDSGSILIDGEDLTDLEDELPPLRRRIGMVFQDFALFPH 90 (178)
T ss_pred eEEEeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCEEccccchhHHHHhhcEEEEecCCccCCC
Confidence 469999999999999999999999999999999999876 458999999987532 2345779999999988888
Q ss_pred CCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHH
Q 045902 978 VTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1057 (1472)
Q Consensus 978 lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~ 1057 (1472)
.|++|++.+. ||||||||++||++|+.+|++++|||||+|||+.+
T Consensus 91 ~t~~~~l~~~-----------------------------------lS~G~~qr~~la~al~~~p~llilDEP~~~LD~~~ 135 (178)
T cd03229 91 LTVLENIALG-----------------------------------LSGGQQQRVALARALAMDPDVLLLDEPTSALDPIT 135 (178)
T ss_pred CCHHHheeec-----------------------------------CCHHHHHHHHHHHHHHCCCCEEEEeCCcccCCHHH
Confidence 9999987542 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1058 AAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1058 ~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
+..+.+.|++++++ |+|+|+++|++. ++.+.+|++++|++|
T Consensus 136 ~~~l~~~l~~~~~~~~~tiii~sH~~~-~~~~~~d~i~~l~~g 177 (178)
T cd03229 136 RREVRALLKSLQAQLGITVVLVTHDLD-EAARLADRVVVLRDG 177 (178)
T ss_pred HHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEEeCC
Confidence 99999999999877 899999999975 466689999999864
No 438
>cd03262 ABC_HisP_GlnQ_permeases HisP and GlnQ are the ATP-binding components of the bacterial periplasmic histidine and glutamine permeases, repectively. Histidine permease is a multisubunit complex containing the HisQ and HisM integral membrane subunits and two copies of HisP. HisP has properties intermediate between those of integral and peripheral membrane proteins and is accessible from both sides of the membrane, presumably by its interaction with HisQ and HisM. The two HisP subunits form a homodimer within the complex. The domain structure of the amino acid uptake systems is typical for prokaryote extracellular solute binding protein-dependent uptake systems. All of the amino acid uptake systems also have at least one, and in a few cases, two extracellular solute binding proteins located in the periplasm of Gram-negative bacteria, or attached to the cell membrane of Gram-positive bacteria. The best-studied member of the PAAT (polar amino acid transport) family is the HisJQM
Probab=100.00 E-value=6.6e-33 Score=309.16 Aligned_cols=195 Identities=25% Similarity=0.372 Sum_probs=161.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCC--C---CCceEEEEcCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEF--V---PQRTCAYISQHDLHHG 260 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~--~---~~~~~~yv~Q~d~~~~ 260 (1472)
+.+|+|+|+.++||++++|+|||||||||||++|+|.++++ +|+|.++|+++... . .++.++|++|++.+++
T Consensus 13 ~~~l~~~s~~i~~G~~~~l~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~~ 89 (213)
T cd03262 13 FHVLKGIDLTVKKGEVVVIIGPSGSGKSTLLRCINLLEEPD---SGTIIIDGLKLTDDKKNINELRQKVGMVFQQFNLFP 89 (213)
T ss_pred eEeecCceEEECCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEECCccchhHHHHHhcceEEecccccCC
Confidence 35999999999999999999999999999999999999887 89999999987431 1 1357999999999999
Q ss_pred CCCHHHHHHHhhhc-cCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 261 EMTVRETLDFSGRC-LGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 261 ~lTV~E~l~f~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
.+||+||+.+.... .+. ...+ . ...++.+++.+||++..++.+.
T Consensus 90 ~~t~~e~l~~~~~~~~~~----------~~~~----------~--------------~~~~~~~l~~~~l~~~~~~~~~- 134 (213)
T cd03262 90 HLTVLENITLAPIKVKGM----------SKAE----------A--------------EERALELLEKVGLADKADAYPA- 134 (213)
T ss_pred CCcHHHHHHhHHHHhcCC----------CHHH----------H--------------HHHHHHHHHHcCCHhHhhhCcc-
Confidence 99999999875321 110 0000 0 0013456788899877776665
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .+.|+|++.|++ .++.+++|++++|
T Consensus 135 ----~LS~G~~qrv~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tvi~~sh~~-~~~~~~~d~i~~l 208 (213)
T cd03262 135 ----QLSGGQQQRVAIARALAMNPKVMLFDEPTSALDPELVGEVLDVMKDLAE-EGMTMVVVTHEM-GFAREVADRVIFM 208 (213)
T ss_pred ----ccCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHHH-cCCEEEEEeCCH-HHHHHhCCEEEEE
Confidence 4999999999999999999999999999999999999999999999976 578888877654 4777899999999
Q ss_pred cCCeE
Q 045902 420 SEGEI 424 (1472)
Q Consensus 420 ~~G~i 424 (1472)
++|++
T Consensus 209 ~~g~i 213 (213)
T cd03262 209 DDGRI 213 (213)
T ss_pred eCCcC
Confidence 99974
No 439
>PRK14238 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.3e-32 Score=317.53 Aligned_cols=213 Identities=23% Similarity=0.286 Sum_probs=167.4
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-CeeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GYIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~G 953 (1472)
.+.++|+++.+. ++.+|+|+|++|++||++||+|+||||||||+++|+|..+ + .+.+|+|.++|
T Consensus 24 ~l~~~~l~~~~~-------------~~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~~~g 90 (271)
T PRK14238 24 VFDTQNLNLWYG-------------EDHALKNINLDIHENEVTAIIGPSGCGKSTYIKTLNRMVELVPSVKTTGKILYRD 90 (271)
T ss_pred EEEEeeeEEEEC-------------CcceeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceeEEECC
Confidence 477888876542 2469999999999999999999999999999999999764 1 13589999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC-CCch----HHHHHHHHHcccc-cccccccCCCCCCC
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR-LPKD----MFVEEVMELVEMK-ALRNSLVGLPGVDG 1022 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-~~~~----~~~~~v~~~l~l~-~~~~~~~~~~~~~~ 1022 (1472)
.+... ..+++.++|++|++.+++ .|+.||+.+....+ .... ..+.++++.+++. ++.+.... .+..
T Consensus 91 ~~~~~~~~~~~~~~~~i~~v~q~~~~~~-~tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~l~~~~~~--~~~~ 167 (271)
T PRK14238 91 QNIFDKSYSVEELRTNVGMVFQKPNPFP-KSIYDNVTYGPKIHGIKDKKTLDEIVEKSLRGAAIWDELKDRLHD--NAYG 167 (271)
T ss_pred EEcccccccHHHHhhhEEEEecCCcccc-ccHHHHHHHHHHhcCCCcHHHHHHHHHHHHHHcCCcchHHHHHhc--Cccc
Confidence 87631 234567999999988877 49999998765432 1111 1234445555432 12221111 2457
Q ss_pred CCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEE
Q 045902 1023 LSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHV 1102 (1472)
Q Consensus 1023 LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v 1102 (1472)
||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||+++|+++ ++.+.+|++++|++ |++
T Consensus 168 LSgGe~qrv~laraL~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~-~~tiiivsH~~~-~i~~~~d~i~~l~~-G~i 244 (271)
T PRK14238 168 LSGGQQQRLCIARCLAIEPDVILMDEPTSALDPISTLKVEELVQELKK-DYSIIIVTHNMQ-QAARISDKTAFFLN-GYV 244 (271)
T ss_pred CCHHHHHHHHHHHHHHcCCCEEEEeCCCCcCCHHHHHHHHHHHHHHHc-CCEEEEEEcCHH-HHHHhCCEEEEEEC-CEE
Confidence 999999999999999999999999999999999999999999999975 799999999976 46778999999985 788
Q ss_pred EEEcCC
Q 045902 1103 IYAGPL 1108 (1472)
Q Consensus 1103 ~~~g~~ 1108 (1472)
+..|+.
T Consensus 245 ~~~g~~ 250 (271)
T PRK14238 245 NEYDDT 250 (271)
T ss_pred EEeCCH
Confidence 888875
No 440
>PRK10790 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=4.3e-33 Score=356.73 Aligned_cols=209 Identities=23% Similarity=0.357 Sum_probs=177.9
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|++|.++ +++.+|+|+|++++|||.+||+|+||||||||+++|+|..++ .+|+|.+||.++
T Consensus 340 ~i~~~~v~f~y~------------~~~~il~~i~l~i~~Ge~iaIvG~SGsGKSTLl~lL~gl~~p--~~G~I~idg~~i 405 (592)
T PRK10790 340 RIDIDNVSFAYR------------DDNLVLQNINLSVPSRGFVALVGHTGSGKSTLASLLMGYYPL--TEGEIRLDGRPL 405 (592)
T ss_pred eEEEEEEEEEeC------------CCCceeeceeEEEcCCCEEEEECCCCCCHHHHHHHHhcccCC--CCceEEECCEEh
Confidence 588999988763 123599999999999999999999999999999999999874 489999999886
Q ss_pred C---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc-------ccccCCCCCCCCCHH
Q 045902 957 K---QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR-------NSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 957 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~-------~~~~~~~~~~~LSgG 1026 (1472)
+ ...+++.++||+|++.+++. |++||+.++. ...++.++++++.+++.+.. |+.+|.. ...||||
T Consensus 406 ~~~~~~~l~~~i~~v~Q~~~lF~~-Ti~~NI~~~~---~~~d~~i~~a~~~~gl~~~i~~lp~Gldt~i~e~-g~~LSGG 480 (592)
T PRK10790 406 SSLSHSVLRQGVAMVQQDPVVLAD-TFLANVTLGR---DISEEQVWQALETVQLAELARSLPDGLYTPLGEQ-GNNLSVG 480 (592)
T ss_pred hhCCHHHHHhheEEEccCCccccc-hHHHHHHhCC---CCCHHHHHHHHHHcCcHHHHHhccccccccccCC-CCCCCHH
Confidence 4 35678899999999999876 9999998863 22456677888888876543 3444443 3579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||++|||||+++|+||+||||||+||+.+++.|.+.|+++.+ ++|||+++|+++ ....+|++++|++ |+++..|
T Consensus 481 qrQRialARaLl~~~~illlDEpts~LD~~t~~~i~~~l~~~~~-~~tvIivtHr~~--~l~~~D~ii~l~~-G~i~~~G 556 (592)
T PRK10790 481 QKQLLALARVLVQTPQILILDEATANIDSGTEQAIQQALAAVRE-HTTLVVIAHRLS--TIVEADTILVLHR-GQAVEQG 556 (592)
T ss_pred HHHHHHHHHHHHhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhC-CCEEEEEecchH--HHHhCCEEEEEEC-CEEEEEc
Confidence 99999999999999999999999999999999999999999864 699999999974 5778999999985 7999999
Q ss_pred CC
Q 045902 1107 PL 1108 (1472)
Q Consensus 1107 ~~ 1108 (1472)
+.
T Consensus 557 ~~ 558 (592)
T PRK10790 557 TH 558 (592)
T ss_pred CH
Confidence 85
No 441
>cd03252 ABCC_Hemolysin The ABC-transporter hemolysin B is a central component of the secretion machinery that translocates the toxin, hemolysin A, in a Sec-independent fashion across both membranes of E. coli. The hemolysin A (HlyA) transport machinery is composed of the ATP-binding cassette (ABC) transporter HlyB located in the inner membrane, hemolysin D (HlyD), also anchored in the inner membrane, and TolC, which resides in the outer membrane. HlyD apparently forms a continuous channel that bridges the entire periplasm, interacting with TolC and HlyB. This arrangement prevents the appearance of periplasmic intermediates of HlyA during substrate transport. Little is known about the molecular details of HlyA transport, but it is evident that ATP-hydrolysis by the ABC-transporter HlyB is a necessary source of energy.
Probab=100.00 E-value=1.2e-32 Score=312.11 Aligned_cols=205 Identities=27% Similarity=0.426 Sum_probs=161.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+.+|+|+|+++++||+++|+|||||||||||++|+|.++++ +|+|.++|.++..... ++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 90 (237)
T cd03252 15 PVILDNISLRIKPGEVVGIVGRSGSGKSTLTKLIQRFYVPE---NGRVLVDGHDLALADPAWLRRQVGVVLQENVLFN-R 90 (237)
T ss_pred ccceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCeehHhcCHHHHhhcEEEEcCCchhcc-c
Confidence 45899999999999999999999999999999999999887 8999999998754322 356999999987764 7
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHh--CCcccccccccCc
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKIL--GLDICADIMVGNE 340 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l--gL~~~~dt~vg~~ 340 (1472)
||+||+.+... .. .. + .+. ... .. ...+..++.+ |++...+..
T Consensus 91 tv~~nl~~~~~--~~-~~-~---~~~---------------~~~---~~------~~~~~~l~~l~~~~~~~~~~~---- 135 (237)
T cd03252 91 SIRDNIALADP--GM-SM-E---RVI---------------EAA---KL------AGAHDFISELPEGYDTIVGEQ---- 135 (237)
T ss_pred hHHHHhhccCC--CC-CH-H---HHH---------------HHH---HH------cCcHHHHHhCcccccchhhcC----
Confidence 99999987432 10 00 0 000 000 00 0112344444 454444433
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
+..|||||||||+||||++.+|++++|||||+|||+.++..+.+.|+++++ +.|+|++.|++. ++ +.+|++++|+
T Consensus 136 -~~~LSgG~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~~-~~-~~~d~v~~l~ 210 (237)
T cd03252 136 -GAGLSGGQRQRIAIARALIHNPRILIFDEATSALDYESEHAIMRNMHDICA--GRTVIIIAHRLS-TV-KNADRIIVME 210 (237)
T ss_pred -CCcCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHhcC--CCEEEEEeCCHH-HH-HhCCEEEEEE
Confidence 455999999999999999999999999999999999999999999999853 789999888875 44 5699999999
Q ss_pred CCeEEEecChhHHH
Q 045902 421 EGEIVYQGPREYVL 434 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~ 434 (1472)
+|++++.|+.+++.
T Consensus 211 ~G~i~~~~~~~~~~ 224 (237)
T cd03252 211 KGRIVEQGSHDELL 224 (237)
T ss_pred CCEEEEEcCHHHHH
Confidence 99999999988764
No 442
>TIGR01277 thiQ thiamine ABC transporter, ATP-binding protein. This model describes the energy-transducing ATPase subunit ThiQ of the ThiBPQ thiamine (and thiamine pyrophosphate) ABC transporter in several Proteobacteria. This protein is found so far only in Proteobacteria, and is found in complete genomes only if the ThiB and ThiP subunits are also found.
Probab=100.00 E-value=1.3e-32 Score=306.69 Aligned_cols=199 Identities=21% Similarity=0.297 Sum_probs=165.2
Q ss_pred eeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-CCceEEEEcCCCCCCCCCCHHH
Q 045902 188 ILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-PQRTCAYISQHDLHHGEMTVRE 266 (1472)
Q Consensus 188 iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-~~~~~~yv~Q~d~~~~~lTV~E 266 (1472)
+++|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|+++.... .++.++|++|++.+++.+|++|
T Consensus 13 ~~~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~i~~v~q~~~~~~~~t~~e 89 (213)
T TIGR01277 13 LPMEFDLNVADGEIVAIMGPSGAGKSTLLNLIAGFIEPA---SGSIKVNDQSHTGLAPYQRPVSMLFQENNLFAHLTVRQ 89 (213)
T ss_pred cceeeEEEEeCCcEEEEECCCCCCHHHHHHHHhcCCCCC---CcEEEECCEEcccCChhccceEEEeccCccCCCCcHHH
Confidence 357999999999999999999999999999999999987 899999999876432 2467999999999999999999
Q ss_pred HHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCC
Q 045902 267 TLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGIS 346 (1472)
Q Consensus 267 ~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLS 346 (1472)
|+.+...... ... ... ....+.+++.+||++..++.+. .||
T Consensus 90 n~~~~~~~~~-~~~--------~~~-------------------------~~~~~~~l~~~~l~~~~~~~~~-----~LS 130 (213)
T TIGR01277 90 NIGLGLHPGL-KLN--------AEQ-------------------------QEKVVDAAQQVGIADYLDRLPE-----QLS 130 (213)
T ss_pred HHHhHhhccC-Ccc--------HHH-------------------------HHHHHHHHHHcCcHHHhhCCcc-----cCC
Confidence 9976432100 000 000 0013457888999877776665 499
Q ss_pred hHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCeEEE
Q 045902 347 GGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGEIVY 426 (1472)
Q Consensus 347 GGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~iv~ 426 (1472)
||||||++||++++.+|++++|||||+|||..++..+.+.|+++.+..+.|+|++.|++ .++.+++|++++|++|+++.
T Consensus 131 ~G~~qrl~laral~~~p~llllDEPt~~LD~~~~~~~~~~l~~~~~~~~~tii~vsh~~-~~~~~~~d~v~~l~~g~i~~ 209 (213)
T TIGR01277 131 GGQRQRVALARCLVRPNPILLLDEPFSALDPLLREEMLALVKQLCSERQRTLLMVTHHL-SDARAIASQIAVVSQGKIKV 209 (213)
T ss_pred HHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCH-HHHHhhcCeEEEEECCeEEE
Confidence 99999999999999999999999999999999999999999998765578888887765 46778999999999999998
Q ss_pred ecC
Q 045902 427 QGP 429 (1472)
Q Consensus 427 ~G~ 429 (1472)
.|.
T Consensus 210 ~~~ 212 (213)
T TIGR01277 210 VSD 212 (213)
T ss_pred ecC
Confidence 875
No 443
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=7.7e-33 Score=318.91 Aligned_cols=199 Identities=25% Similarity=0.371 Sum_probs=164.7
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh------hcccceeEEeccCC--CC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ------ETFARISGYCEQND--IH 974 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~------~~~~~~~gyv~Q~~--~~ 974 (1472)
+.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++ .+
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~~ 102 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLES--PSQGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISAV 102 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEECCEeccccChhHHHHHHhcEEEEEcChhhcc
Confidence 579999999999999999999999999999999999876 458999999987532 12456799999997 35
Q ss_pred CCCCCHHHHHHHHHHc--CCCch---HHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 045902 975 SPNVTIYESLLYSAWL--RLPKD---MFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE 1048 (1472)
Q Consensus 975 ~~~lTv~e~l~~~~~l--~~~~~---~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDE 1048 (1472)
.+..|+.|++.+.... ..... ..++++++.+++. ...+.. ...||||||||++||++|+.+|++|+|||
T Consensus 103 ~~~~t~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~gl~~~~~~~~-----~~~LS~Ge~qrl~laral~~~p~lllLDE 177 (268)
T PRK10419 103 NPRKTVREIIREPLRHLLSLDKAERLARASEMLRAVDLDDSVLDKR-----PPQLSGGQLQRVCLARALAVEPKLLILDE 177 (268)
T ss_pred CCCCCHHHHHHHHHHhhccCCHHHHHHHHHHHHHHcCCChhHhhCC-----CccCChHHHHHHHHHHHHhcCCCEEEEeC
Confidence 6789999998764321 11111 3467788888875 344443 34799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1049 PTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1049 PTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
||+|||+.++..+.+.|++++++ |.|||++||+++ ++.+.+|++++|.+ |++++.|+..+
T Consensus 178 Pt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~~ 238 (268)
T PRK10419 178 AVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDLR-LVERFCQRVMVMDN-GQIVETQPVGD 238 (268)
T ss_pred CCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCHH-HHHHhCCEEEEEEC-CEEeeeCChhh
Confidence 99999999999999999999765 899999999976 46678999999985 78999988643
No 444
>PRK11176 lipid transporter ATP-binding/permease protein; Provisional
Probab=100.00 E-value=3.3e-33 Score=357.41 Aligned_cols=212 Identities=24% Similarity=0.336 Sum_probs=177.0
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.++++|++|.++. +++.+|+|+|++|+|||++||+|+||||||||+++|+|..++ .+|+|.+||.+.
T Consensus 341 ~i~~~~vsf~y~~-----------~~~~il~~i~l~i~~G~~~aIvG~sGsGKSTLl~ll~gl~~p--~~G~I~i~g~~i 407 (582)
T PRK11176 341 DIEFRNVTFTYPG-----------KEVPALRNINFKIPAGKTVALVGRSGSGKSTIANLLTRFYDI--DEGEILLDGHDL 407 (582)
T ss_pred eEEEEEEEEecCC-----------CCCccccCceEEeCCCCEEEEECCCCCCHHHHHHHHHhccCC--CCceEEECCEEh
Confidence 5889999887631 225699999999999999999999999999999999998874 589999999986
Q ss_pred Ch---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccc-------cccccCCCCCCCCCHH
Q 045902 957 KQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKAL-------RNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 957 ~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~-------~~~~~~~~~~~~LSgG 1026 (1472)
++ ..+++.++|++|++.+++ -|++||+.++.. ....++.++++++..++.+. .|+.+|..| ..||||
T Consensus 408 ~~~~~~~~~~~i~~v~Q~~~lf~-~Ti~~Ni~~~~~-~~~~~~~i~~al~~~~l~~~i~~lp~Gldt~ig~~g-~~LSGG 484 (582)
T PRK11176 408 RDYTLASLRNQVALVSQNVHLFN-DTIANNIAYART-EQYSREQIEEAARMAYAMDFINKMDNGLDTVIGENG-VLLSGG 484 (582)
T ss_pred hhcCHHHHHhhceEEccCceeec-chHHHHHhcCCC-CCCCHHHHHHHHHHhCcHHHHHhcccccCceeCCCC-CcCCHH
Confidence 43 466788999999999886 599999987421 11234567777777776543 245555443 579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||++|||||+++|+||+||||||+||+.++..+++.|+++. +++|||++||+++ ..+.||++++|++ |+++..|
T Consensus 485 qrQRi~LARall~~~~ililDEptsaLD~~t~~~i~~~l~~~~-~~~tvI~VtHr~~--~~~~~D~Ii~l~~-g~i~e~g 560 (582)
T PRK11176 485 QRQRIAIARALLRDSPILILDEATSALDTESERAIQAALDELQ-KNRTSLVIAHRLS--TIEKADEILVVED-GEIVERG 560 (582)
T ss_pred HHHHHHHHHHHHhCCCEEEEECccccCCHHHHHHHHHHHHHHh-CCCEEEEEecchH--HHHhCCEEEEEEC-CEEEEeC
Confidence 9999999999999999999999999999999999999999985 4799999999974 6788999999985 7999999
Q ss_pred CC
Q 045902 1107 PL 1108 (1472)
Q Consensus 1107 ~~ 1108 (1472)
+.
T Consensus 561 ~~ 562 (582)
T PRK11176 561 TH 562 (582)
T ss_pred CH
Confidence 84
No 445
>PRK14237 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-32 Score=313.26 Aligned_cols=211 Identities=22% Similarity=0.301 Sum_probs=165.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCeeCCCCC-----CCceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS--LRVSGRVTYCGHELTEFV-----PQRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 258 (1472)
+++|+|+|+++++||+++|+|||||||||||++|+|.+++. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 33 ~~il~~vsl~i~~Ge~~~I~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~ 112 (267)
T PRK14237 33 KEAIKGIDMQFEKNKITALIGPSGSGKSTYLRSLNRMNDTIDIARVTGQILYRGIDINRKEINVYEMRKHIGMVFQRPNP 112 (267)
T ss_pred eeeEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhccCccCCCCcceEEEECCEEcccccCChHHHhcceEEEecCCcc
Confidence 35899999999999999999999999999999999998631 123899999999875321 14579999999888
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
++ .||+||+.++.+..+... + .+.+ ..++.+++.+||.+..+...
T Consensus 113 ~~-~tv~eni~~~~~~~~~~~---------~----------~~~~--------------~~~~~~l~~~~l~~~i~~~~- 157 (267)
T PRK14237 113 FA-KSIYENITFALERAGVKD---------K----------KVLD--------------EIVETSLKQAALWDQVKDDL- 157 (267)
T ss_pred cc-ccHHHHHHhHHHhcCCCC---------H----------HHHH--------------HHHHHHHHHcCCCchhhhhh-
Confidence 87 699999988643211100 0 0000 01244677777754322222
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
+...+.||||||||++|||+++.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++. ++.+++|++++
T Consensus 158 ~~~~~~LS~G~~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~~-~~~~~~d~i~~ 234 (267)
T PRK14237 158 HKSALTLSGGQQQRLCIARAIAVKPDILLMDEPASALDPISTMQLEETMFELKK--NYTIIIVTHNMQ-QAARASDYTAF 234 (267)
T ss_pred cCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEecCHH-HHHHhcCEEEE
Confidence 234566999999999999999999999999999999999999999999999853 578888877654 67889999999
Q ss_pred ecCCeEEEecChhHHH
Q 045902 419 LSEGEIVYQGPREYVL 434 (1472)
Q Consensus 419 L~~G~iv~~G~~~~~~ 434 (1472)
|++|++++.|+.+++.
T Consensus 235 l~~G~i~~~g~~~~~~ 250 (267)
T PRK14237 235 FYLGDLIEYDKTRNIF 250 (267)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999988763
No 446
>TIGR02633 xylG D-xylose ABC transporter, ATP-binding protein. Several bacterial species have enzymes xylose isomerase and xylulokinase enzymes for xylose utilization. Members of this protein family are the ATP-binding cassette (ABC) subunit of the known or predicted high-affinity xylose ABC transporter for xylose import. These genes, which closely resemble other sugar transport ABC transporter genes, typically are encoded near xylose utilization enzymes and regulatory proteins. Note that this form of the transporter contains two copies of the ABC transporter domain (pfam00005).
Probab=100.00 E-value=8.8e-33 Score=346.65 Aligned_cols=202 Identities=22% Similarity=0.355 Sum_probs=167.7
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChh----cccceeEEeccCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQE----TFARISGYCEQNDIHSPN 977 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~----~~~~~~gyv~Q~~~~~~~ 977 (1472)
++.+|+|||+++++||++||+||||||||||+++|+|..++++.+|+|.++|.++... ..++.+||++|++.+++.
T Consensus 13 ~~~il~~isl~i~~Ge~~~liG~nGsGKSTLl~~i~G~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 92 (500)
T TIGR02633 13 GVKALDGIDLEVRPGECVGLCGENGAGKSTLMKILSGVYPHGTWDGEIYWSGSPLKASNIRDTERAGIVIIHQELTLVPE 92 (500)
T ss_pred CeEeecceEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCCCCCCCeEEEECCEECCCCCHHHHHhCCEEEEeeccccCCC
Confidence 3569999999999999999999999999999999999876423589999999876431 123568999999988999
Q ss_pred CCHHHHHHHHHHcC-----CCch---HHHHHHHHHccccccc-ccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccC
Q 045902 978 VTIYESLLYSAWLR-----LPKD---MFVEEVMELVEMKALR-NSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDE 1048 (1472)
Q Consensus 978 lTv~e~l~~~~~l~-----~~~~---~~~~~v~~~l~l~~~~-~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDE 1048 (1472)
+||.|++.+..... .+.+ ..++++++.+++.+.. +.. +..|||||||||+||++|+.+|++|+|||
T Consensus 93 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~~LSgG~~qrv~iA~al~~~p~lllLDE 167 (500)
T TIGR02633 93 LSVAENIFLGNEITLPGGRMAYNAMYLRAKNLLRELQLDADNVTRP-----VGDYGGGQQQLVEIAKALNKQARLLILDE 167 (500)
T ss_pred CcHHHHHHhhccccccccccCHHHHHHHHHHHHHHcCCCCCcccCc-----hhhCCHHHHHHHHHHHHHhhCCCEEEEeC
Confidence 99999998764322 1111 3456778888776543 232 34799999999999999999999999999
Q ss_pred CCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1049 PTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1049 PTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |+++..|+...
T Consensus 168 Pt~~LD~~~~~~l~~~l~~l~~~g~tviiitHd~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 227 (500)
T TIGR02633 168 PSSSLTEKETEILLDIIRDLKAHGVACVYISHKLN-EVKAVCDTICVIRD-GQHVATKDMST 227 (500)
T ss_pred CCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCcHH-HHHHhCCEEEEEeC-CeEeeecCccc
Confidence 99999999999999999999888999999999976 46678999999986 68888887654
No 447
>PRK13540 cytochrome c biogenesis protein CcmA; Provisional
Probab=100.00 E-value=6.6e-33 Score=305.90 Aligned_cols=182 Identities=24% Similarity=0.320 Sum_probs=154.3
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh--hcccceeEEeccCCCCCCCCCH
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ--ETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~--~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
+++|+|+|+++++||++||+||||||||||+++|+|..+ +.+|+|.++|.+... ..+++.++|++|+..+++..||
T Consensus 14 ~~il~~~s~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~v~~~g~~~~~~~~~~~~~i~~~~q~~~~~~~~tv 91 (200)
T PRK13540 14 QPLLQQISFHLPAGGLLHLKGSNGAGKTTLLKLIAGLLN--PEKGEILFERQSIKKDLCTYQKQLCFVGHRSGINPYLTL 91 (200)
T ss_pred eeEEeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCeeEEECCCccccCHHHHHhheEEeccccccCcCCCH
Confidence 569999999999999999999999999999999999876 458999999987642 3456779999999888889999
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHH
Q 045902 981 YESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAI 1060 (1472)
Q Consensus 981 ~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~ 1060 (1472)
+|++.+..... ..+..++++++.+++.+..+... ..||+|||||++|||+|+.+|++|+|||||+|||+.++..
T Consensus 92 ~~~~~~~~~~~-~~~~~~~~~l~~~~l~~~~~~~~-----~~LS~G~~~rv~laral~~~p~~lilDEP~~~LD~~~~~~ 165 (200)
T PRK13540 92 RENCLYDIHFS-PGAVGITELCRLFSLEHLIDYPC-----GLLSSGQKRQVALLRLWMSKAKLWLLDEPLVALDELSLLT 165 (200)
T ss_pred HHHHHHHHhcC-cchHHHHHHHHHcCCchhhhCCh-----hhcCHHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHH
Confidence 99998764322 12345678888888876555443 4799999999999999999999999999999999999999
Q ss_pred HHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEE
Q 045902 1061 VMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELF 1094 (1472)
Q Consensus 1061 i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~ 1094 (1472)
+.+.|++++++|+|||+++|++. ..+.+|..+
T Consensus 166 l~~~l~~~~~~~~tiii~sh~~~--~~~~~d~~~ 197 (200)
T PRK13540 166 IITKIQEHRAKGGAVLLTSHQDL--PLNKADYEE 197 (200)
T ss_pred HHHHHHHHHHcCCEEEEEeCCch--hccccchhh
Confidence 99999998777999999999965 445566544
No 448
>cd03289 ABCC_CFTR2 The CFTR subfamily domain 2. The cystic fibrosis transmembrane regulator (CFTR), the product of the gene mutated in patients with cystic fibrosis, has adapted the ABC transporter structural motif to form a tightly regulated anion channel at the apical surface of many epithelia. Use of the term assembly of a functional ion channel implies the coming together of subunits or at least smaller not-yet functional components of the active whole. In fact, on the basis of current knowledge only the CFTR polypeptide itself is required to form an ATP- and protein kinase A-dependent low-conductance chloride channel of the type present in the apical membrane of many epithelial cells. CFTR displays the typical organization (IM-ABC)2 and carries a characteristic hydrophilic R-domain that separates IM1-ABC1 from IM2-ABC2.
Probab=100.00 E-value=7.2e-33 Score=318.29 Aligned_cols=210 Identities=20% Similarity=0.277 Sum_probs=170.7
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.++. +...+|+|||++|++||+++|+||||||||||+++|+|..+ .+|+|.++|.++.
T Consensus 3 i~~~nls~~~~~-----------~~~~~l~~isl~I~~Ge~~~IvG~nGsGKSTLl~~L~gl~~---~~G~I~i~g~~i~ 68 (275)
T cd03289 3 MTVKDLTAKYTE-----------GGNAVLENISFSISPGQRVGLLGRTGSGKSTLLSAFLRLLN---TEGDIQIDGVSWN 68 (275)
T ss_pred EEEEEEEEEeCC-----------CCCcceeceEEEEcCCCEEEEECCCCCCHHHHHHHHhhhcC---CCcEEEECCEEhh
Confidence 567787766531 22459999999999999999999999999999999999875 3799999998763
Q ss_pred h---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCC------CCCCCCCHHHH
Q 045902 958 Q---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGL------PGVDGLSTEQR 1028 (1472)
Q Consensus 958 ~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~------~~~~~LSgGqr 1028 (1472)
. ...++.++|++|++.+++. |++||+..... ..++.+.++++.+++.+..+...+. .+...||||||
T Consensus 69 ~~~~~~lr~~i~~v~q~~~lf~~-tv~~nl~~~~~---~~~~~~~~~l~~~gL~~~~~~~p~~l~~~~~~~g~~LS~G~~ 144 (275)
T cd03289 69 SVPLQKWRKAFGVIPQKVFIFSG-TFRKNLDPYGK---WSDEEIWKVAEEVGLKSVIEQFPGQLDFVLVDGGCVLSHGHK 144 (275)
T ss_pred hCCHHHHhhhEEEECCCcccchh-hHHHHhhhccC---CCHHHHHHHHHHcCCHHHHHhCcccccceecCCCCCCCHHHH
Confidence 2 3456789999999998874 99999964221 1234566778888887665554321 12346999999
Q ss_pred HHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1029 KRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1029 qRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||++|||||+.+|+||+|||||+|||+.+...+.+.|+++. .++|||+++|+++ ....+|++++|++ |++++.|++
T Consensus 145 qrl~LaRall~~p~illlDEpts~LD~~~~~~l~~~l~~~~-~~~tii~isH~~~--~i~~~dri~vl~~-G~i~~~g~~ 220 (275)
T cd03289 145 QLMCLARSVLSKAKILLLDEPSAHLDPITYQVIRKTLKQAF-ADCTVILSEHRIE--AMLECQRFLVIEE-NKVRQYDSI 220 (275)
T ss_pred HHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHhc-CCCEEEEEECCHH--HHHhCCEEEEecC-CeEeecCCH
Confidence 99999999999999999999999999999999999999875 4899999999975 3456999999985 789999986
Q ss_pred C
Q 045902 1109 G 1109 (1472)
Q Consensus 1109 ~ 1109 (1472)
.
T Consensus 221 ~ 221 (275)
T cd03289 221 Q 221 (275)
T ss_pred H
Confidence 3
No 449
>PTZ00265 multidrug resistance protein (mdr1); Provisional
Probab=100.00 E-value=4.2e-33 Score=380.76 Aligned_cols=213 Identities=23% Similarity=0.381 Sum_probs=175.3
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC---------------------------------------
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS--------------------------------------- 226 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~--------------------------------------- 226 (1472)
.++|+|+|+.|+||+.+||+||||||||||+++|.|+++|.
T Consensus 1181 ~~vL~~lsl~i~~G~~vAIVG~SGsGKSTl~~LL~r~ydp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1260 (1466)
T PTZ00265 1181 VPIYKDLTFSCDSKKTTAIVGETGSGKSTVMSLLMRFYDLKNDHHIVFKNEHTNDMTNEQDYQGDEEQNVGMKNVNEFSL 1260 (1466)
T ss_pred CccccCeeEEEcCCCEEEEECCCCCCHHHHHHHHHHhCCCcccccccccccccccccccccccccccccccccccccccc
Confidence 46999999999999999999999999999999999999972
Q ss_pred ------------CCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHH
Q 045902 227 ------------LRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEMTVRETLDFSGRCLGVGTRFELLAELSRRE 291 (1472)
Q Consensus 227 ------------~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~ 291 (1472)
...+|+|++||+++.+... ++.++||+|++.+| +.||+|||.|+..-
T Consensus 1261 ~~~~~~~~~~~~~~~~G~I~idG~di~~~~~~~lR~~i~~V~Qep~LF-~gTIreNI~~g~~~----------------- 1322 (1466)
T PTZ00265 1261 TKEGGSGEDSTVFKNSGKILLDGVDICDYNLKDLRNLFSIVSQEPMLF-NMSIYENIKFGKED----------------- 1322 (1466)
T ss_pred ccccccccccccCCCCCeEEECCEEHHhCCHHHHHhhccEeCCCCccc-cccHHHHHhcCCCC-----------------
Confidence 0138999999999988764 57899999999888 57999999886210
Q ss_pred HhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCC
Q 045902 292 KDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEI 371 (1472)
Q Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEp 371 (1472)
..+++++++.+.+.++ |.| -.|++..||.|| +.+..||||||||++|||||+.+|+||+||||
T Consensus 1323 -----at~eeI~~A~k~A~l~--------~fI---~~LP~GydT~VG-e~G~~LSGGQkQRIaIARALlr~p~ILLLDEa 1385 (1466)
T PTZ00265 1323 -----ATREDVKRACKFAAID--------EFI---ESLPNKYDTNVG-PYGKSLSGGQKQRIAIARALLREPKILLLDEA 1385 (1466)
T ss_pred -----CCHHHHHHHHHHcCCH--------HHH---HhCccccCCccC-CCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCc
Confidence 0122333333333221 222 357888999999 67788999999999999999999999999999
Q ss_pred CCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC----CeEE-EecChhHHHH
Q 045902 372 STGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE----GEIV-YQGPREYVLD 435 (1472)
Q Consensus 372 tsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~----G~iv-~~G~~~~~~~ 435 (1472)
||+||+.++..|.+.|+++....++|+|++.|++ ++.+.+|+|++|++ |+++ ++|+++++++
T Consensus 1386 TSaLD~~sE~~I~~~L~~~~~~~~~TvIiIaHRl--sti~~aD~Ivvl~~~~~~G~iv~e~Gth~eLl~ 1452 (1466)
T PTZ00265 1386 TSSLDSNSEKLIEKTIVDIKDKADKTIITIAHRI--ASIKRSDKIVVFNNPDRTGSFVQAHGTHEELLS 1452 (1466)
T ss_pred ccccCHHHHHHHHHHHHHHhccCCCEEEEEechH--HHHHhCCEEEEEeCCCCCCCEEEEecCHHHHHh
Confidence 9999999999999999987533578998888876 56788999999999 9965 8999999863
No 450
>TIGR03873 F420-0_ABC_ATP proposed F420-0 ABC transporter, ATP-binding protein. This small clade of ABC-type transporter ATP-binding protein components is found as a three gene cassette along with a periplasmic substrate-binding protein (TIGR03868) and a permease (TIGR03869). The organisms containing this cassette are all Actinobacteria and all contain numerous genes requiring the coenzyme F420. This model was defined based on five such organisms, four of which are lacking all F420 biosynthetic capability save the final side-chain polyglutamate attachment step (via the gene cofE: TIGR01916). In Jonesia denitrificans DSM 20603 and marine actinobacterium PHSC20C1 this cassette is in an apparent operon with the cofE gene and, in PHSC20C1, also with a F420-dependent glucose-6-phosphate dehydrogenase (TIGR03554). Based on these observations we propose that this ATP-binding protein is a component of an F420-0 (that is, F420 lacking only the polyglutamate tail) transporter.
Probab=100.00 E-value=1.3e-32 Score=315.31 Aligned_cols=208 Identities=28% Similarity=0.386 Sum_probs=169.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+.+|+|+|+.++|||+++|+|||||||||||++|+|.++++ +|+|.++|+++..... ++.++|++|++.+++.+
T Consensus 14 ~~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 90 (256)
T TIGR03873 14 RLIVDGVDVTAPPGSLTGLLGPNGSGKSTLLRLLAGALRPD---AGTVDLAGVDLHGLSRRARARRVALVEQDSDTAVPL 90 (256)
T ss_pred EEEEeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCCCC---CCEEEECCEEcccCCHHHHhhheEEecccCccCCCC
Confidence 36999999999999999999999999999999999999887 8999999998765432 34699999998888889
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||+||+.+...... .. ... +..+. ....+.+++.+||.+..|+.++.
T Consensus 91 tv~e~l~~~~~~~~---------~~------~~~-~~~~~--------------~~~~~~~l~~~~l~~~~~~~~~~--- 137 (256)
T TIGR03873 91 TVRDVVALGRIPHR---------SL------WAG-DSPHD--------------AAVVDRALARTELSHLADRDMST--- 137 (256)
T ss_pred CHHHHHHhcchhhh---------hh------ccC-CCHHH--------------HHHHHHHHHHcCcHhhhcCCccc---
Confidence 99999987421000 00 000 00000 00134577888998777776654
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
|||||||||+||+|++.+|++++|||||+|||+.+...+.+.|+++.+ .+.|+|++.|++. ++.+++|+|++|++|
T Consensus 138 --LS~G~~qrl~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~~tiii~sH~~~-~~~~~~d~i~~l~~G 213 (256)
T TIGR03873 138 --LSGGERQRVHVARALAQEPKLLLLDEPTNHLDVRAQLETLALVRELAA-TGVTVVAALHDLN-LAASYCDHVVVLDGG 213 (256)
T ss_pred --CCHHHHHHHHHHHHHhcCCCEEEEcCccccCCHHHHHHHHHHHHHHHh-cCCEEEEEeCCHH-HHHHhCCEEEEEeCC
Confidence 999999999999999999999999999999999999999999999875 4788888887764 777899999999999
Q ss_pred eEEEecChhHH
Q 045902 423 EIVYQGPREYV 433 (1472)
Q Consensus 423 ~iv~~G~~~~~ 433 (1472)
+++..|+.+++
T Consensus 214 ~i~~~g~~~~~ 224 (256)
T TIGR03873 214 RVVAAGPPREV 224 (256)
T ss_pred CEEEecCHHHh
Confidence 99999998765
No 451
>PRK14235 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.8e-32 Score=315.91 Aligned_cols=211 Identities=22% Similarity=0.347 Sum_probs=163.9
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCeeCCCC--C---CCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS--LRVSGRVTYCGHELTEF--V---PQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~--~---~~~~~~yv~Q~d~~~ 259 (1472)
.+|+|+|+.|+||++++|+|||||||||||++|+|.+++. ...+|+|+++|+++... . .++.++|++|++..+
T Consensus 33 ~il~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~I~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~~ 112 (267)
T PRK14235 33 QALFDVDLDIPEKTVTAFIGPSGCGKSTFLRCLNRMNDTIDGCRVTGKITLDGEDIYDPRLDVVELRARVGMVFQKPNPF 112 (267)
T ss_pred EEEEEEEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccccCCCCceEEEECCEECcccccchHHHhhceEEEecCCCCC
Confidence 5999999999999999999999999999999999998641 01289999999987532 1 235799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+. ||.||+.|..+..+... .+. +.. ..++.+++.+||.+...... +
T Consensus 113 ~~-tv~enl~~~~~~~~~~~--------~~~----------~~~--------------~~~~~~l~~~~l~~~~~~~~-~ 158 (267)
T PRK14235 113 PK-SIYENVAYGPRIHGLAR--------SKA----------ELD--------------EIVETSLRKAGLWEEVKDRL-H 158 (267)
T ss_pred CC-cHHHHHHHHHHhccccc--------chH----------HHH--------------HHHHHHHHHcCCchhhhHHh-h
Confidence 74 99999988643221100 000 000 01345677788854211111 1
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
..++.|||||||||+|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|++++|
T Consensus 159 ~~~~~LSgGq~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~L~~l~~--~~tiiivtH~~-~~~~~~~d~v~~l 235 (267)
T PRK14235 159 EPGTGLSGGQQQRLCIARAIAVSPEVILMDEPCSALDPIATAKVEELIDELRQ--NYTIVIVTHSM-QQAARVSQRTAFF 235 (267)
T ss_pred CCcccCCHHHHHHHHHHHHHHcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHhc--CCeEEEEEcCH-HHHHhhCCEEEEE
Confidence 23456999999999999999999999999999999999999999999999864 57888887765 4677899999999
Q ss_pred cCCeEEEecChhHHH
Q 045902 420 SEGEIVYQGPREYVL 434 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~ 434 (1472)
++|+++.+|+.+++.
T Consensus 236 ~~G~i~~~g~~~~~~ 250 (267)
T PRK14235 236 HLGNLVEVGDTEKMF 250 (267)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999987763
No 452
>CHL00131 ycf16 sulfate ABC transporter protein; Validated
Probab=100.00 E-value=2e-32 Score=313.21 Aligned_cols=214 Identities=23% Similarity=0.320 Sum_probs=167.5
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++++++.+. ++.+|+|||+++++||++||+|+||||||||+++|+|.....+.+|+|.++|.+.
T Consensus 7 ~l~~~~l~~~~~-------------~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~G~i~~~g~~~ 73 (252)
T CHL00131 7 ILEIKNLHASVN-------------ENEILKGLNLSINKGEIHAIMGPNGSGKSTLSKVIAGHPAYKILEGDILFKGESI 73 (252)
T ss_pred eEEEEeEEEEeC-------------CEEeeecceeEEcCCcEEEEECCCCCCHHHHHHHHcCCCcCcCCCceEEECCEEc
Confidence 467778776542 2469999999999999999999999999999999999721114589999999875
Q ss_pred Ch---hcccc-eeEEeccCCCCCCCCCHHHHHHHHHHcCC-----C---c---hHHHHHHHHHcccc-cccccccCCCCC
Q 045902 957 KQ---ETFAR-ISGYCEQNDIHSPNVTIYESLLYSAWLRL-----P---K---DMFVEEVMELVEMK-ALRNSLVGLPGV 1020 (1472)
Q Consensus 957 ~~---~~~~~-~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~-----~---~---~~~~~~v~~~l~l~-~~~~~~~~~~~~ 1020 (1472)
.. ...++ .++|++|++.+++.+|+.|++.+...... . . ...++++++.+++. ...+...+
T Consensus 74 ~~~~~~~~~~~~~~~~~q~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~---- 149 (252)
T CHL00131 74 LDLEPEERAHLGIFLAFQYPIEIPGVSNADFLRLAYNSKRKFQGLPELDPLEFLEIINEKLKLVGMDPSFLSRNVN---- 149 (252)
T ss_pred ccCChhhhheeeEEEEeccccccccccHHHHHHHhhhhhhcccccccccHHHHHHHHHHHHHHcCCchhhhccccc----
Confidence 43 12222 47899999999999999999876432110 1 0 12345666777765 23333321
Q ss_pred CCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHh-hCeEEEEecC
Q 045902 1021 DGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRG 1099 (1472)
Q Consensus 1021 ~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~-~D~v~~l~~g 1099 (1472)
..||||||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++. +... +|++++|.+
T Consensus 150 ~~LSgG~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~g~tii~~tH~~~~-~~~~~~d~i~~l~~- 227 (252)
T CHL00131 150 EGFSGGEKKRNEILQMALLDSELAILDETDSGLDIDALKIIAEGINKLMTSENSIILITHYQRL-LDYIKPDYVHVMQN- 227 (252)
T ss_pred cCCCHHHHHHHHHHHHHHcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHhCCCEEEEEecCHHH-HHhhhCCEEEEEeC-
Confidence 2599999999999999999999999999999999999999999999998779999999999763 4444 799999975
Q ss_pred cEEEEEcCCC
Q 045902 1100 GHVIYAGPLG 1109 (1472)
Q Consensus 1100 g~v~~~g~~~ 1109 (1472)
|++++.|+.+
T Consensus 228 G~i~~~~~~~ 237 (252)
T CHL00131 228 GKIIKTGDAE 237 (252)
T ss_pred CEEEEecChh
Confidence 7999998763
No 453
>COG1132 MdlB ABC-type multidrug transport system, ATPase and permease components [Defense mechanisms]
Probab=100.00 E-value=3.8e-33 Score=355.22 Aligned_cols=211 Identities=28% Similarity=0.425 Sum_probs=175.5
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
..+.|+|++|.++. ++++|+|+|++++|||.+||+||||||||||++.|.|..++ .+|+|.+||.+
T Consensus 327 ~~I~f~~vsf~y~~------------~~~vl~~is~~i~~Ge~vaiVG~sGsGKSTl~~LL~r~~~~--~~G~I~idg~d 392 (567)
T COG1132 327 GSIEFENVSFSYPG------------KKPVLKDISFSIEPGEKVAIVGPSGSGKSTLIKLLLRLYDP--TSGEILIDGID 392 (567)
T ss_pred CeEEEEEEEEEcCC------------CCccccCceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCC--CCCeEEECCEe
Confidence 45899999988642 45799999999999999999999999999999999998874 58999999988
Q ss_pred CC---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccc-------ccccccCCCCCCCCCH
Q 045902 956 KK---QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKA-------LRNSLVGLPGVDGLST 1025 (1472)
Q Consensus 956 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~-------~~~~~~~~~~~~~LSg 1025 (1472)
++ ...+++.++||+|++.++. -|++||+.++..- -.++.++++++..++.+ -.|+.+|.. ...|||
T Consensus 393 I~~i~~~~lr~~I~~V~Qd~~LF~-~TI~~NI~~g~~~--at~eei~~a~k~a~~~d~I~~lp~g~dt~vge~-G~~LSg 468 (567)
T COG1132 393 IRDISLDSLRKRIGIVSQDPLLFS-GTIRENIALGRPD--ATDEEIEEALKLANAHEFIANLPDGYDTIVGER-GVNLSG 468 (567)
T ss_pred hhhcCHHHHHHhccEEcccceeec-ccHHHHHhcCCCC--CCHHHHHHHHHHhChHHHHHhCcccccceecCC-CccCCH
Confidence 64 3567889999999999987 7999999886321 12334445554443332 246667643 457999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
|||||++||||++++|+||+||||||+||+.+...|++.++++. +|+|+|+++|+++ ....+|++++|++ |+++..
T Consensus 469 GQrQrlaiARall~~~~ILILDEaTSalD~~tE~~I~~~l~~l~-~~rT~iiIaHRls--ti~~aD~IiVl~~-G~i~e~ 544 (567)
T COG1132 469 GQRQRLAIARALLRNPPILILDEATSALDTETEALIQDALKKLL-KGRTTLIIAHRLS--TIKNADRIIVLDN-GRIVER 544 (567)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeccccccCHHhHHHHHHHHHHHh-cCCEEEEEeccHh--HHHhCCEEEEEEC-CEEEEe
Confidence 99999999999999999999999999999999999999999887 5789999999985 4556999999986 789999
Q ss_pred cCC
Q 045902 1106 GPL 1108 (1472)
Q Consensus 1106 g~~ 1108 (1472)
|+.
T Consensus 545 G~h 547 (567)
T COG1132 545 GTH 547 (567)
T ss_pred cCH
Confidence 985
No 454
>PRK11701 phnK phosphonate C-P lyase system protein PhnK; Provisional
Probab=100.00 E-value=2.2e-32 Score=313.89 Aligned_cols=206 Identities=24% Similarity=0.347 Sum_probs=166.1
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCee-----CCCCCC-------CceEEEEcC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHE-----LTEFVP-------QRTCAYISQ 254 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~-----~~~~~~-------~~~~~yv~Q 254 (1472)
.+|+|+|+.+++||+++|+||||||||||+++|+|.++|+ +|+|.++|.+ +..... ++.++|++|
T Consensus 20 ~il~~is~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---~G~i~~~g~~~~~~~i~~~~~~~~~~~~~~~i~~v~q 96 (258)
T PRK11701 20 KGCRDVSFDLYPGEVLGIVGESGSGKTTLLNALSARLAPD---AGEVHYRMRDGQLRDLYALSEAERRRLLRTEWGFVHQ 96 (258)
T ss_pred eeeeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CCEEEECCccccccccccCCHHHHHHHhhcceEEEee
Confidence 5899999999999999999999999999999999999887 8999999987 654322 246999999
Q ss_pred CCC--CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc-
Q 045902 255 HDL--HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI- 331 (1472)
Q Consensus 255 ~d~--~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~- 331 (1472)
++. +.+.+|+.||+.+......... . ++. ...++.+++.+|+.+
T Consensus 97 ~~~~~~~~~~~~~~~i~~~~~~~~~~~-~------------------~~~--------------~~~~~~~l~~~~l~~~ 143 (258)
T PRK11701 97 HPRDGLRMQVSAGGNIGERLMAVGARH-Y------------------GDI--------------RATAGDWLERVEIDAA 143 (258)
T ss_pred CcccccCccccHHHHHHHHHHHhccCc-H------------------HHH--------------HHHHHHHHHHcCCChh
Confidence 973 5777899999976321110000 0 000 001345788889864
Q ss_pred cccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHh
Q 045902 332 CADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYD 411 (1472)
Q Consensus 332 ~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~ 411 (1472)
..++.++ .|||||||||+|||||+.+|++|+|||||+|||..+...+.+.|+++++..+.|+|++.|++ .++.+
T Consensus 144 ~~~~~~~-----~LS~Gq~qrl~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tii~isH~~-~~~~~ 217 (258)
T PRK11701 144 RIDDLPT-----TFSGGMQQRLQIARNLVTHPRLVFMDEPTGGLDVSVQARLLDLLRGLVRELGLAVVIVTHDL-AVARL 217 (258)
T ss_pred HHhCCCc-----cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHhcCcEEEEEeCCH-HHHHH
Confidence 4565554 59999999999999999999999999999999999999999999998765578888887765 46677
Q ss_pred ccCeEEEecCCeEEEecChhHHH
Q 045902 412 LFDDIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 412 ~fD~iilL~~G~iv~~G~~~~~~ 434 (1472)
.+|++++|++|++++.|+.+++.
T Consensus 218 ~~d~i~~l~~g~i~~~~~~~~~~ 240 (258)
T PRK11701 218 LAHRLLVMKQGRVVESGLTDQVL 240 (258)
T ss_pred hcCEEEEEECCEEEEeCCHHHHh
Confidence 89999999999999999987763
No 455
>TIGR02323 CP_lyasePhnK phosphonate C-P lyase system protein PhnK. Members of this family are the PhnK protein of C-P lyase systems for utilization of phosphonates. These systems resemble phosphonatase-based systems in having a three component ABC transporter, where TIGR01097 is the permease, TIGR01098 is the phosphonates binding protein, and TIGR02315 is the ATP-binding cassette (ABC) protein. They differ, however, in having, typically, ten or more additional genes, many of which are believed to form a membrane-associated complex. This protein (PhnK) and the adjacent-encoded PhnL resemble transporter ATP-binding proteins but are suggested, based on mutatgenesis studies, to be part of this complex rather than part of a transporter per se.
Probab=100.00 E-value=1.6e-32 Score=314.21 Aligned_cols=209 Identities=27% Similarity=0.320 Sum_probs=165.9
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc--
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP-- 955 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~-- 955 (1472)
+.++|+++.+ ++..+|+|+|++|++|++++|+||||||||||+++|+|..+ +.+|+|.++|.+
T Consensus 4 l~~~~l~~~~-------------~~~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~ 68 (253)
T TIGR02323 4 LQVSGLSKSY-------------GGGKGCRDVSFDLYPGEVLGIVGESGSGKSTLLGCLAGRLA--PDHGTATYIMRSGA 68 (253)
T ss_pred EEEeeeEEEe-------------CCceEeecceEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCcEEEEeccccc
Confidence 5667776554 22468999999999999999999999999999999999876 358999999976
Q ss_pred ---CCh---hc----ccceeEEeccCCC--CCCCCCHHHHHHHHHH-cC-CC---chHHHHHHHHHcccc-cccccccCC
Q 045902 956 ---KKQ---ET----FARISGYCEQNDI--HSPNVTIYESLLYSAW-LR-LP---KDMFVEEVMELVEMK-ALRNSLVGL 1017 (1472)
Q Consensus 956 ---~~~---~~----~~~~~gyv~Q~~~--~~~~lTv~e~l~~~~~-l~-~~---~~~~~~~v~~~l~l~-~~~~~~~~~ 1017 (1472)
... .. .++.++|++|++. ..+.+|+.|++.+... .. .. ....++++++.+++. ...++.
T Consensus 69 ~~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~--- 145 (253)
T TIGR02323 69 ELELYQLSEAERRRLMRTEWGFVHQNPRDGLRMRVSAGANIGERLMAIGARHYGNIRAAAHDWLEEVEIDPTRIDDL--- 145 (253)
T ss_pred ccccccCCHHHHHHhhhcceEEEEeCcccccCccccHHHHHHHHHHHhcccchHHHHHHHHHHHHHcCCChhhhhcC---
Confidence 321 11 2346899999974 4466799999865321 11 11 123456777888875 244443
Q ss_pred CCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEE
Q 045902 1018 PGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLM 1096 (1472)
Q Consensus 1018 ~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l 1096 (1472)
+..|||||||||+|||||+.+|++|+|||||+|||+.++..+.+.|+++.++ |.|||+++|++. .+.+.+|++++|
T Consensus 146 --~~~LSgG~~qrv~laral~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~~~~~tii~vsH~~~-~~~~~~d~~~~l 222 (253)
T TIGR02323 146 --PRAFSGGMQQRLQIARNLVTRPRLVFMDEPTGGLDVSVQARLLDLLRGLVRDLGLAVIIVTHDLG-VARLLAQRLLVM 222 (253)
T ss_pred --chhcCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHHHhcCCEEEEEeCCHH-HHHHhcCEEEEE
Confidence 3579999999999999999999999999999999999999999999998764 899999999976 466789999999
Q ss_pred ecCcEEEEEcCC
Q 045902 1097 KRGGHVIYAGPL 1108 (1472)
Q Consensus 1097 ~~gg~v~~~g~~ 1108 (1472)
++ |+++..|+.
T Consensus 223 ~~-G~i~~~~~~ 233 (253)
T TIGR02323 223 QQ-GRVVESGLT 233 (253)
T ss_pred EC-CEEEEECCH
Confidence 85 788888874
No 456
>PRK14245 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.9e-32 Score=312.91 Aligned_cols=210 Identities=20% Similarity=0.280 Sum_probs=164.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCC---CCCCCCceeEEEEcCeeCCCCC-----CCceEEEEcCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGK---SDKSLRVSGRVTYCGHELTEFV-----PQRTCAYISQHDL 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~---~~~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~ 257 (1472)
+++|+|+|+.+++||+++|+||||||||||+++|+|. .++. ..+|+|.++|+++.... .++.++|++|++.
T Consensus 16 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~-~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~ 94 (250)
T PRK14245 16 FHALKGISMEIEEKSVVAFIGPSGCGKSTFLRLFNRMNDLIPAT-RLEGEIRIDGRNIYDKGVQVDELRKNVGMVFQRPN 94 (250)
T ss_pred EeEEeeeeEEEeCCCEEEEECCCCCCHHHHHHHHhhhhcccCCC-CCceEEEECCEecccccccHHHHhhheEEEecCCc
Confidence 3599999999999999999999999999999999996 3331 12799999999876421 1356999999988
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMV 337 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 337 (1472)
+++ .||+||+.+..+..+.... + ..+ ..++.+++.+||.+..++..
T Consensus 95 ~~~-~tv~~nl~~~~~~~~~~~~----------~---------~~~--------------~~~~~~l~~~~l~~~~~~~~ 140 (250)
T PRK14245 95 PFP-KSIFENVAYGLRVNGVKDN----------A---------FIR--------------QRVEETLKGAALWDEVKDKL 140 (250)
T ss_pred cCc-ccHHHHHHHHHHHcCCCcH----------H---------HHH--------------HHHHHHHHHcCCCcchhhhh
Confidence 887 6999999876432211000 0 000 01345677888864321111
Q ss_pred cCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEE
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDII 417 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ii 417 (1472)
+.....|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|+|++.|++. ++.+++|+++
T Consensus 141 -~~~~~~LS~G~~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivtH~~~-~~~~~~d~v~ 216 (250)
T PRK14245 141 -KESAFALSGGQQQRLCIARAMAVSPSVLLMDEPASALDPISTAKVEELIHELKK--DYTIVIVTHNMQ-QAARVSDKTA 216 (250)
T ss_pred -hCCcccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCHH-HHHhhCCEEE
Confidence 133456999999999999999999999999999999999999999999999853 678888877654 6778999999
Q ss_pred EecCCeEEEecChhHHH
Q 045902 418 LLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 418 lL~~G~iv~~G~~~~~~ 434 (1472)
+|++|++++.|+.+++.
T Consensus 217 ~l~~G~~~~~~~~~~~~ 233 (250)
T PRK14245 217 FFYMGEMVEYDDTKKIF 233 (250)
T ss_pred EEECCEEEEECCHHHHh
Confidence 99999999999998874
No 457
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=8e-33 Score=312.01 Aligned_cols=197 Identities=26% Similarity=0.389 Sum_probs=158.4
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
+.+|+|+|+++++||+++|+|||||||||||++|+|..+ +.+|+|.++|.++.. ..+++.++|++|++.+++. |
T Consensus 16 ~~~l~~isl~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~~-t 92 (229)
T cd03254 16 KPVLKDINFSIKPGETVAIVGPTGAGKTTLINLLMRFYD--PQKGQILIDGIDIRDISRKSLRSMIGVVLQDTFLFSG-T 92 (229)
T ss_pred CccccceEEEEcCCCEEEEECCCCCCHHHHHHHHhcCcC--CCCCEEEECCEeHHHcCHHHHhhhEEEecCCchhhhh-H
Confidence 359999999999999999999999999999999999876 358999999987532 3345678999999887775 9
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHccccccccccc-C-----CCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 980 IYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLV-G-----LPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 980 v~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~-~-----~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
++||+.+.... .....+++.++.+++.+..+... + ...+..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 v~~~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~LS~G~~~rv~la~al~~~p~llllDEP~~~L 170 (229)
T cd03254 93 IMENIRLGRPN--ATDEEVIEAAKEAGAHDFIMKLPNGYDTVLGENGGNLSQGERQLLAIARAMLRDPKILILDEATSNI 170 (229)
T ss_pred HHHHHhccCCC--CCHHHHHHHHHHhChHHHHHhCcccccCHhhcCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 99999765321 12233455555555554433321 0 1124589999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1054 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+.++..+++.|+++. +|+|||++||+++. + +.+|++++|.+ |++++.|+.
T Consensus 171 D~~~~~~l~~~l~~~~-~~~tii~~sh~~~~-~-~~~d~i~~l~~-g~~~~~~~~ 221 (229)
T cd03254 171 DTETEKLIQEALEKLM-KGRTSIIIAHRLST-I-KNADKILVLDD-GKIIEEGTH 221 (229)
T ss_pred CHHHHHHHHHHHHHhc-CCCEEEEEecCHHH-H-hhCCEEEEEeC-CeEEEeCCH
Confidence 9999999999999986 58999999999763 4 56999999985 788887764
No 458
>PRK14241 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.2e-32 Score=313.81 Aligned_cols=207 Identities=24% Similarity=0.344 Sum_probs=164.0
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCeeCCCC-----CCCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSL--RVSGRVTYCGHELTEF-----VPQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 259 (1472)
++|+|+|+.+++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 18 ~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~laGl~~~~~~~~~~G~I~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 97 (258)
T PRK14241 18 HAVEDVNLNIEPRSVTAFIGPSGCGKSTVLRTLNRMHEVIPGARVEGEVLLDGEDLYGPGVDPVAVRRTIGMVFQRPNPF 97 (258)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhccCCcccCCCcceEEEECCEeccccccChHHHhcceEEEccccccC
Confidence 58999999999999999999999999999999999986410 1389999999987421 1235799999999999
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc----ccccc
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD----ICADI 335 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 335 (1472)
+.+||+||+.+.....+... .. +.+ ..++.+++.+||. +..++
T Consensus 98 ~~~tv~~nl~~~~~~~~~~~---------~~----------~~~--------------~~~~~~l~~~~l~~~~~~~~~~ 144 (258)
T PRK14241 98 PTMSIRDNVVAGLKLNGVRN---------KK----------DLD--------------ELVEKSLRGANLWNEVKDRLDK 144 (258)
T ss_pred CCCcHHHHHHHHHHhcCCCC---------HH----------HHH--------------HHHHHHHHHcCCchhhhhHhhC
Confidence 99999999987643221000 00 000 0124466777774 23344
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
.+ ..|||||||||+|||||+.+|++++|||||+|||..++..+.+.|+++++ ++|+|++.|++ .++.+++|+
T Consensus 145 ~~-----~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tviivsH~~-~~~~~~~d~ 216 (258)
T PRK14241 145 PG-----GGLSGGQQQRLCIARAIAVEPDVLLMDEPCSALDPISTLAIEDLINELKQ--DYTIVIVTHNM-QQAARVSDQ 216 (258)
T ss_pred Cc-----ccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEecCH-HHHHHhCCE
Confidence 33 45999999999999999999999999999999999999999999999854 57888877765 467789999
Q ss_pred EEEec------CCeEEEecChhHHH
Q 045902 416 IILLS------EGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~------~G~iv~~G~~~~~~ 434 (1472)
+++|+ +|++++.|+.+++.
T Consensus 217 i~~l~~~~~~~~g~i~~~~~~~~~~ 241 (258)
T PRK14241 217 TAFFNLEATGKPGRLVEIDDTEKIF 241 (258)
T ss_pred EEEEecccCCCCceEEecCCHHHHH
Confidence 99997 79999999988764
No 459
>PRK14270 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-32 Score=312.06 Aligned_cols=207 Identities=21% Similarity=0.343 Sum_probs=164.1
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC--CCceeEEEEcCeeCCCCC-----CCceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS--LRVSGRVTYCGHELTEFV-----PQRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~--~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 258 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|..++. ...+|+|.++|+++.... .++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (251)
T PRK14270 17 KQALNDINLPIYENKITALIGPSGCGKSTFLRCLNRMNDLISNVKIEGEVLLDGKNIYDKDVDVVELRKRVGMVFQKPNP 96 (251)
T ss_pred eeeeeceeEEEcCCCEEEEECCCCCCHHHHHHHHHhccCcccCCCCccEEEECCEecccccccHHHHHhheEEEecCCCc
Confidence 35899999999999999999999999999999999987641 113899999999885421 13569999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc----cccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD----ICAD 334 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 334 (1472)
++ +||+||+.|.....+.... .+ .. ..++.+++.+||. +..+
T Consensus 97 ~~-~tv~enl~~~~~~~~~~~~---------~~----------~~--------------~~~~~~l~~~~l~~~~~~~~~ 142 (251)
T PRK14270 97 FP-MSIYDNVAYGPRIHGIKDK---------KE----------LD--------------KIVEWALKKAALWDEVKDDLK 142 (251)
T ss_pred CC-CcHHHHHHhHHHhcCCCcH---------HH----------HH--------------HHHHHHHHHcCCchhhhhHhh
Confidence 87 8999999876432211000 00 00 0123456677764 2234
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccC
Q 045902 335 IMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFD 414 (1472)
Q Consensus 335 t~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD 414 (1472)
.. .+.|||||||||+||++++.+|++++|||||+|||+.++.++.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 143 ~~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~L~~~~~--~~tiiivsH~~-~~~~~~~d 214 (251)
T PRK14270 143 KS-----ALKLSGGQQQRLCIARTIAVKPDVILMDEPTSALDPISTLKIEDLMVELKK--EYTIVIVTHNM-QQASRVSD 214 (251)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHHh--CCeEEEEEcCH-HHHHHhcC
Confidence 33 456999999999999999999999999999999999999999999999865 47888887765 47788999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 045902 415 DIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 415 ~iilL~~G~iv~~G~~~~~~ 434 (1472)
++++|++|++++.|+.+++.
T Consensus 215 ~v~~l~~G~i~~~~~~~~~~ 234 (251)
T PRK14270 215 YTAFFLMGDLIEFNKTEKIF 234 (251)
T ss_pred EEEEEECCeEEEeCCHHHHh
Confidence 99999999999999988763
No 460
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=7.5e-33 Score=314.04 Aligned_cols=197 Identities=29% Similarity=0.377 Sum_probs=156.4
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNVT 979 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~lT 979 (1472)
+.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~t 92 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYD--PTSGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-GT 92 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCC--CCCCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-hh
Confidence 469999999999999999999999999999999999876 458999999987532 233456999999988776 69
Q ss_pred HHHHHHHHHHcCCCchHHHHHHHHHccccccccccc------CCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 980 IYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLV------GLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 980 v~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~------~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
++|++.+....+ .....++.++..++..+.+.+. -...+..||||||||++||++|+.+|++|+|||||+||
T Consensus 93 v~e~l~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~LS~G~~qrv~la~al~~~p~llllDEP~~gL 170 (238)
T cd03249 93 IAENIRYGKPDA--TDEEVEEAAKKANIHDFIMSLPDGYDTLVGERGSQLSGGQKQRIAIARALLRNPKILLLDEATSAL 170 (238)
T ss_pred HHHHhhccCCCC--CHHHHHHHHHHcChHHHHHhhccccceeeccCCccCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 999998743221 1122333444444433222110 01124579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1054 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+.++..+++.|+++. +|+|||+++|+++. + +.||++++|.+ |++++.|+.
T Consensus 171 D~~~~~~l~~~l~~~~-~g~~vi~~sh~~~~-~-~~~d~v~~l~~-G~i~~~~~~ 221 (238)
T cd03249 171 DAESEKLVQEALDRAM-KGRTTIVIAHRLST-I-RNADLIAVLQN-GQVVEQGTH 221 (238)
T ss_pred CHHHHHHHHHHHHHhc-CCCEEEEEeCCHHH-H-hhCCEEEEEEC-CEEEEeCCH
Confidence 9999999999999997 78999999999763 4 58999999986 788888874
No 461
>PRK14248 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=6.8e-32 Score=311.43 Aligned_cols=204 Identities=20% Similarity=0.305 Sum_probs=160.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC-----CCCCceeEEEEcCeeCCCCC-----CCceEEEEcCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD-----KSLRVSGRVTYCGHELTEFV-----PQRTCAYISQH 255 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~-----~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~ 255 (1472)
+.+|+|+|+.+++||+++|+|||||||||||++|+|..+ ++ +|+|.++|+++.... .++.++|++|+
T Consensus 34 ~~il~~vsl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~---~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~ 110 (268)
T PRK14248 34 KRAVNDISMDIEKHAVTALIGPSGCGKSTFLRSINRMNDLIPSARS---EGEILYEGLNILDSNINVVNLRREIGMVFQK 110 (268)
T ss_pred ceeeeceEEEEcCCCEEEEECCCCCCHHHHHHHHHhcccccCCCCC---ceEEEECCEEcccccccHHHHhccEEEEecC
Confidence 358999999999999999999999999999999999754 34 899999999875421 13579999999
Q ss_pred CCCCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc----
Q 045902 256 DLHHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI---- 331 (1472)
Q Consensus 256 d~~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~---- 331 (1472)
+.+++. ||+||+.+.....+... ....+. .....++.+|+.+
T Consensus 111 ~~~~~~-tv~enl~~~~~~~~~~~-------------------~~~~~~--------------~~~~~l~~~~l~~~~~~ 156 (268)
T PRK14248 111 PNPFPK-SIYNNITHALKYAGERR-------------------KSVLDE--------------IVEESLTKAALWDEVKD 156 (268)
T ss_pred CccCcc-cHHHHHHHHHHhcCCCc-------------------HHHHHH--------------HHHHHHHHcCCCcchHH
Confidence 988875 99999987532211000 000000 1223455566532
Q ss_pred cccccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHh
Q 045902 332 CADIMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYD 411 (1472)
Q Consensus 332 ~~dt~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~ 411 (1472)
..++. ...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+
T Consensus 157 ~~~~~-----~~~LSgGq~qrl~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~-~~~~~ 228 (268)
T PRK14248 157 RLHSS-----ALSLSGGQQQRLCIARTLAMKPAVLLLDEPASALDPISNAKIEELITELKE--EYSIIIVTHNM-QQALR 228 (268)
T ss_pred HHhcC-----cccCCHHHHHHHHHHHHHhCCCCEEEEcCCCcccCHHHHHHHHHHHHHHhc--CCEEEEEEeCH-HHHHH
Confidence 23333 445999999999999999999999999999999999999999999999864 57888887775 46778
Q ss_pred ccCeEEEecCCeEEEecChhHHH
Q 045902 412 LFDDIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 412 ~fD~iilL~~G~iv~~G~~~~~~ 434 (1472)
++|++++|++|++++.|+.+++.
T Consensus 229 ~~d~v~~l~~G~i~~~~~~~~~~ 251 (268)
T PRK14248 229 VSDRTAFFLNGDLVEYDQTEQIF 251 (268)
T ss_pred hCCEEEEEECCEEEEeCCHHHHH
Confidence 99999999999999999987763
No 462
>cd03232 ABC_PDR_domain2 The pleiotropic drug resistance-like (PDR) family of ATP-binding cassette (ABC) transporters. PDR is a well-described phenomenon occurring in fungi and shares several similarities with processes in bacteria and higher eukaryotes. This PDR subfamily represents domain I of its (ABC-IM)2 organization. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds including sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2.5e-32 Score=299.08 Aligned_cols=170 Identities=38% Similarity=0.696 Sum_probs=149.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCeeCCCCCCCceEEEEcCCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD--KSLRVSGRVTYCGHELTEFVPQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~~~~~~~~yv~Q~d~~~~~lT 263 (1472)
+++|+|+|+.+++||+++|+|||||||||||++|+|... ++ +|+|.++|+++. ...++.++|++|++.+++.+|
T Consensus 20 ~~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~~~---~G~i~~~g~~~~-~~~~~~i~~~~q~~~~~~~~t 95 (192)
T cd03232 20 RQLLNNISGYVKPGTLTALMGESGAGKTTLLDVLAGRKTAGVI---TGEILINGRPLD-KNFQRSTGYVEQQDVHSPNLT 95 (192)
T ss_pred eEeEEccEEEEeCCcEEEEECCCCCCHHHHHHHHhCCCcCCCc---ceEEEECCEehH-HHhhhceEEecccCccccCCc
Confidence 469999999999999999999999999999999999753 44 899999999875 223467999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.++.. ++
T Consensus 96 v~~~l~~~~~--------------------------------------------------~~------------------ 107 (192)
T cd03232 96 VREALRFSAL--------------------------------------------------LR------------------ 107 (192)
T ss_pred HHHHHHHHHH--------------------------------------------------Hh------------------
Confidence 9999976310 00
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecC-C
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSE-G 422 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~-G 422 (1472)
.|||||||||+||+|++.+|++++|||||+|||+.++..+.+.|+++++ .++|+|++.|++..++.+.+|++++|++ |
T Consensus 108 ~LSgGe~qrv~la~al~~~p~vlllDEP~~~LD~~~~~~l~~~l~~~~~-~~~tiiivtH~~~~~~~~~~d~i~~l~~~g 186 (192)
T cd03232 108 GLSVEQRKRLTIGVELAAKPSILFLDEPTSGLDSQAAYNIVRFLKKLAD-SGQAILCTIHQPSASIFEKFDRLLLLKRGG 186 (192)
T ss_pred cCCHHHhHHHHHHHHHhcCCcEEEEeCCCcCCCHHHHHHHHHHHHHHHH-cCCEEEEEEcCChHHHHhhCCEEEEEcCCC
Confidence 3999999999999999999999999999999999999999999999875 4789999988876557789999999999 9
Q ss_pred eEEEec
Q 045902 423 EIVYQG 428 (1472)
Q Consensus 423 ~iv~~G 428 (1472)
++++.|
T Consensus 187 ~i~~~g 192 (192)
T cd03232 187 KTVYFG 192 (192)
T ss_pred eEEeCC
Confidence 999876
No 463
>PRK14269 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-32 Score=310.95 Aligned_cols=212 Identities=20% Similarity=0.299 Sum_probs=164.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|.+++....+|+|+++|+++.+... ++.++|++|++.+++ .
T Consensus 15 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~G~i~~~g~~i~~~~~~~~~~~i~~~~q~~~l~~-~ 93 (246)
T PRK14269 15 KQALFDINMQIEQNKITALIGASGCGKSTFLRCFNRMNDKIAKIDGLVEIEGKDVKNQDVVALRKNVGMVFQQPNVFV-K 93 (246)
T ss_pred EeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhcccCCCCCCceEEEECCEecccCCHHHHhhhEEEEecCCcccc-c
Confidence 369999999999999999999999999999999999875211128999999998865432 357999999988887 6
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
||+||+.++....+... +....+ ...+.+++.+||........ +...
T Consensus 94 tv~eni~~~~~~~~~~~------------------~~~~~~--------------~~~~~~l~~~~l~~~~~~~~-~~~~ 140 (246)
T PRK14269 94 SIYENISYAPKLHGMIK------------------NKDEEE--------------ALVVDCLQKVGLFEEVKDKL-KQNA 140 (246)
T ss_pred cHHHHhhhHHhhcCccc------------------ChHHHH--------------HHHHHHHHHcCCChhhhHHh-cCCc
Confidence 99999987643221100 000000 01245677888843211111 2344
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
+.|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|++++|++|
T Consensus 141 ~~LS~G~~qrv~laral~~~p~lllLDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~tH~~-~~~~~~~d~i~~l~~G 217 (246)
T PRK14269 141 LALSGGQQQRLCIARALAIKPKLLLLDEPTSALDPISSGVIEELLKELSH--NLSMIMVTHNM-QQGKRVADYTAFFHLG 217 (246)
T ss_pred ccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhC--CCEEEEEecCH-HHHHhhCcEEEEEECC
Confidence 56999999999999999999999999999999999999999999999853 67888887765 4677899999999999
Q ss_pred eEEEecChhHHH
Q 045902 423 EIVYQGPREYVL 434 (1472)
Q Consensus 423 ~iv~~G~~~~~~ 434 (1472)
++++.|+.+++.
T Consensus 218 ~i~~~g~~~~~~ 229 (246)
T PRK14269 218 ELIEFGESKEFF 229 (246)
T ss_pred EEEEECCHHHHH
Confidence 999999987763
No 464
>TIGR03796 NHPM_micro_ABC1 NHPM bacteriocin system ABC transporter, peptidase/ATP-binding protein. This protein describes an multidomain ABC transporter subunit that is one of three protein families associated with some regularity with a distinctive family of putative bacteriocins. It includes a bacteriocin-processing peptidase domain at the N-terminus. Model TIGR03793 describes a conserved propeptide region for this bacteriocin family, unusual because it shows obvious homology a region of the enzyme nitrile hydratase up to the classic Gly-Gly cleavage motif. This family is therefore predicted to be a subunit of a bacteriocin processing and export system characteristic to this system that we designate NHPM, Nitrile Hydratase Propeptide Microcin.
Probab=100.00 E-value=5.1e-33 Score=363.09 Aligned_cols=210 Identities=27% Similarity=0.371 Sum_probs=175.2
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
..+.++|++|.++. .++.+|+|+|++|+|||.+||+||||||||||+++|+|..++ .+|+|.+||.+
T Consensus 476 ~~I~~~~vsf~y~~-----------~~~~vL~~isl~i~~Ge~vaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 542 (710)
T TIGR03796 476 GYVELRNITFGYSP-----------LEPPLIENFSLTLQPGQRVALVGGSGSGKSTIAKLVAGLYQP--WSGEILFDGIP 542 (710)
T ss_pred CeEEEEEEEEecCC-----------CCCCcccceeEEEcCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCcEEEECCEe
Confidence 36889999987642 234699999999999999999999999999999999999874 58999999998
Q ss_pred CC---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc-------ccccCCCCCCCCCH
Q 045902 956 KK---QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR-------NSLVGLPGVDGLST 1025 (1472)
Q Consensus 956 ~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~-------~~~~~~~~~~~LSg 1025 (1472)
+. ...+++.+|||+|++.+++ .|++||+.+.. ....++.+.++++..++.+.. |+.+|.. ..+|||
T Consensus 543 i~~~~~~~lr~~i~~v~Q~~~lf~-gTi~eNi~l~~--~~~~~~~i~~al~~~~l~~~i~~lp~gl~t~i~e~-G~~LSG 618 (710)
T TIGR03796 543 REEIPREVLANSVAMVDQDIFLFE-GTVRDNLTLWD--PTIPDADLVRACKDAAIHDVITSRPGGYDAELAEG-GANLSG 618 (710)
T ss_pred HHHCCHHHHHhheeEEecCChhhh-ccHHHHhhCCC--CCCCHHHHHHHHHHhCCHHHHHhCcCcccceeccC-CCCCCH
Confidence 64 3567889999999998885 59999997642 112345566777777765543 3445543 357999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
|||||++|||||+++|+||+||||||+||+.+++.+++.|++ .++|+|+++|+++ ....+|++++|++ |+++..
T Consensus 619 GQrQRiaLARall~~p~iliLDEptS~LD~~te~~i~~~l~~---~~~T~IiitHrl~--~i~~~D~Iivl~~-G~i~~~ 692 (710)
T TIGR03796 619 GQRQRLEIARALVRNPSILILDEATSALDPETEKIIDDNLRR---RGCTCIIVAHRLS--TIRDCDEIIVLER-GKVVQR 692 (710)
T ss_pred HHHHHHHHHHHHhhCCCEEEEECccccCCHHHHHHHHHHHHh---cCCEEEEEecCHH--HHHhCCEEEEEeC-CEEEEe
Confidence 999999999999999999999999999999999999999986 4899999999975 5677999999985 799999
Q ss_pred cCC
Q 045902 1106 GPL 1108 (1472)
Q Consensus 1106 g~~ 1108 (1472)
|+.
T Consensus 693 G~~ 695 (710)
T TIGR03796 693 GTH 695 (710)
T ss_pred cCH
Confidence 985
No 465
>PRK14274 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.8e-32 Score=313.10 Aligned_cols=210 Identities=18% Similarity=0.300 Sum_probs=163.0
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCeeCCCC-----CCCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD--KSLRVSGRVTYCGHELTEF-----VPQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 259 (1472)
.+|+|+|+.|++||+++|+|||||||||||++|+|.++ ++...+|+|.++|+++... ..++.++|++|++.++
T Consensus 26 ~~l~~vs~~i~~Ge~~~l~G~nGsGKSTLl~~l~G~~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 105 (259)
T PRK14274 26 HALKNINLSIPENEVTAIIGPSGCGKSTFIKTLNLMIQMVPNVKLTGEMNYNGSNILKGKVDLVELRKNIGMVFQKGNPF 105 (259)
T ss_pred eeEEeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhccCCCCCCCceEEEECCEEccccccCHHHHhhceEEEecCCccc
Confidence 58999999999999999999999999999999999986 3212389999999987531 1135799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+. ||+||+.|..+..+...+ . +.+ ..++.+++.+|+.+...... +
T Consensus 106 ~~-tv~enl~~~~~~~~~~~~---------~----------~~~--------------~~~~~~l~~~~l~~~~~~~l-~ 150 (259)
T PRK14274 106 PQ-SIFDNVAYGPRIHGTKNK---------K----------KLQ--------------EIVEKSLKDVALWDEVKDRL-H 150 (259)
T ss_pred cc-CHHHHHHhHHHhcCCCCH---------H----------HHH--------------HHHHHHHHHcCCchhhhhhh-h
Confidence 75 999999875432211000 0 000 01234566677643111111 1
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
...+.||||||||++||++|+.+|++++|||||+|||..++..+.+.|+++.+ ++|+|++.|++. ++.+++|++++|
T Consensus 151 ~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiivtH~~~-~~~~~~d~i~~l 227 (259)
T PRK14274 151 TQALSLSGGQQQRLCIARALATNPDVLLMDEPTSALDPVSTRKIEELILKLKE--KYTIVIVTHNMQ-QAARVSDQTAFF 227 (259)
T ss_pred CCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEEcCHH-HHHHhCCEEEEE
Confidence 33456999999999999999999999999999999999999999999999853 578888877654 777899999999
Q ss_pred cCCeEEEecChhHHH
Q 045902 420 SEGEIVYQGPREYVL 434 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~ 434 (1472)
++|+++.+|+++++.
T Consensus 228 ~~G~i~~~g~~~~~~ 242 (259)
T PRK14274 228 YMGELVECNDTNKMF 242 (259)
T ss_pred ECCEEEEECCHHHHh
Confidence 999999999988763
No 466
>PRK14256 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-32 Score=310.96 Aligned_cols=208 Identities=22% Similarity=0.289 Sum_probs=165.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCeeCCCC-----CCCceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD--KSLRVSGRVTYCGHELTEF-----VPQRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 258 (1472)
+.+|+|+|+.|++||+++|+|||||||||||++|+|.++ ++...+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~~i~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14256 17 NHAVKDVSMDFPENSVTAIIGPSGCGKSTVLRSINRMHDLVPSARVTGKILLDDTDIYDRGVDPVSIRRRVGMVFQKPNP 96 (252)
T ss_pred eeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHHhcccCCCCCCCceEEEECCEEcccccCChHHhhccEEEEecCCCC
Confidence 359999999999999999999999999999999999975 3111379999999987532 124579999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc----ccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI----CAD 334 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~d 334 (1472)
++.+||+||+.+..+..+... . .+.+ ..++.+++.+|+.. ..+
T Consensus 97 ~~~~tv~enl~~~~~~~~~~~---------~----------~~~~--------------~~~~~~l~~~~l~~~~~~~~~ 143 (252)
T PRK14256 97 FPAMSIYDNVIAGYKLNGRVN---------R----------SEAD--------------EIVESSLKRVALWDEVKDRLK 143 (252)
T ss_pred CCcCcHHHHHHhHHHhcCCCC---------H----------HHHH--------------HHHHHHHHHcCCchhhhHHhh
Confidence 999999999987533211000 0 0000 01345677777753 223
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccC
Q 045902 335 IMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFD 414 (1472)
Q Consensus 335 t~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD 414 (1472)
+ ....|||||||||+||++++.+|++++|||||+|||..++.++.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 144 ~-----~~~~LS~G~~qrl~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~--~~tiiivsH~~-~~~~~~~d 215 (252)
T PRK14256 144 S-----NAMELSGGQQQRLCIARTIAVKPEVILMDEPASALDPISTLKIEELIEELKE--KYTIIIVTHNM-QQAARVSD 215 (252)
T ss_pred C-----CcCcCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHh--CCcEEEEECCH-HHHHhhCC
Confidence 3 3445999999999999999999999999999999999999999999999964 47888877765 47778999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 045902 415 DIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 415 ~iilL~~G~iv~~G~~~~~~ 434 (1472)
++++|++|+++..|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14256 216 YTAFFYMGDLVECGETKKIF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999987763
No 467
>PRK11160 cysteine/glutathione ABC transporter membrane/ATP-binding component; Reviewed
Probab=100.00 E-value=7.1e-33 Score=352.26 Aligned_cols=212 Identities=26% Similarity=0.401 Sum_probs=177.4
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
..+.++|+++.++. +++.+|+|+|++++|||++||+||||||||||+++|+|..+ +.+|+|.+||.+
T Consensus 337 ~~i~~~~v~f~y~~-----------~~~~il~~i~~~i~~G~~~aivG~sGsGKSTL~~ll~g~~~--p~~G~I~i~g~~ 403 (574)
T PRK11160 337 VSLTLNNVSFTYPD-----------QPQPVLKGLSLQIKAGEKVALLGRTGCGKSTLLQLLTRAWD--PQQGEILLNGQP 403 (574)
T ss_pred CeEEEEEEEEECCC-----------CCCcceecceEEECCCCEEEEECCCCCCHHHHHHHHhcCCC--CCCceEEECCEE
Confidence 36889999887631 12469999999999999999999999999999999999877 458999999998
Q ss_pred CCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc------ccccCCCCCCCCCHH
Q 045902 956 KKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR------NSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 956 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~------~~~~~~~~~~~LSgG 1026 (1472)
+.+ ..+++.++||+|++.+++ .|++||+.+... ...++.++++++..++.+.. |+.+|.. ...||||
T Consensus 404 i~~~~~~~~r~~i~~v~Q~~~lf~-~ti~~Ni~~~~~--~~~~~~i~~al~~~~l~~~i~~p~GldT~vge~-g~~LSgG 479 (574)
T PRK11160 404 IADYSEAALRQAISVVSQRVHLFS-ATLRDNLLLAAP--NASDEALIEVLQQVGLEKLLEDDKGLNAWLGEG-GRQLSGG 479 (574)
T ss_pred hhhCCHHHHHhheeEEcccchhhc-ccHHHHhhcCCC--ccCHHHHHHHHHHcCCHHHHcCccccCchhcCC-CCCCCHH
Confidence 643 456788999999998876 599999987531 12345677788888877653 3444433 3579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||++|||||+++|++|+||||||+||+.+++.+++.|+++. +++|+|+++|+++ ....+|++++|++ |+++..|
T Consensus 480 qrqRialARall~~~~ililDE~ts~lD~~t~~~i~~~l~~~~-~~~tviiitHr~~--~~~~~d~i~~l~~-G~i~~~g 555 (574)
T PRK11160 480 EQRRLGIARALLHDAPLLLLDEPTEGLDAETERQILELLAEHA-QNKTVLMITHRLT--GLEQFDRICVMDN-GQIIEQG 555 (574)
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHc-CCCEEEEEecChh--HHHhCCEEEEEeC-CeEEEeC
Confidence 9999999999999999999999999999999999999999985 4899999999986 4567999999985 7899988
Q ss_pred CC
Q 045902 1107 PL 1108 (1472)
Q Consensus 1107 ~~ 1108 (1472)
+.
T Consensus 556 ~~ 557 (574)
T PRK11160 556 TH 557 (574)
T ss_pred CH
Confidence 74
No 468
>PRK13546 teichoic acids export protein ATP-binding subunit; Provisional
Probab=100.00 E-value=3.7e-32 Score=311.37 Aligned_cols=201 Identities=19% Similarity=0.282 Sum_probs=162.4
Q ss_pred ccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCChhcccceeEEeccCCCCCCCCCH
Q 045902 901 NRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 901 ~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
..+.+|+|+|++|+|||++||+||||||||||+++|+|..+ +.+|+|.++|. ++++.|+..+.+.+|+
T Consensus 35 ~~~~il~~is~~i~~Ge~~~liG~NGsGKSTLlk~L~Gl~~--p~~G~I~~~g~----------~~~~~~~~~~~~~~tv 102 (264)
T PRK13546 35 KTFFALDDISLKAYEGDVIGLVGINGSGKSTLSNIIGGSLS--PTVGKVDRNGE----------VSVIAISAGLSGQLTG 102 (264)
T ss_pred CceEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhCCcC--CCceEEEECCE----------EeEEecccCCCCCCcH
Confidence 44679999999999999999999999999999999999876 45899999984 3567777777788999
Q ss_pred HHHHHHHHHcC-CCch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHH
Q 045902 981 YESLLYSAWLR-LPKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDAR 1056 (1472)
Q Consensus 981 ~e~l~~~~~l~-~~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~ 1056 (1472)
.||+.+..... .+.+ ..++++++.+++.+..+.. +..||||||||++||++|+.+|++|+|||||+|||+.
T Consensus 103 ~enl~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LS~Gq~qrv~Laral~~~p~iLlLDEPt~gLD~~ 177 (264)
T PRK13546 103 IENIEFKMLCMGFKRKEIKAMTPKIIEFSELGEFIYQP-----VKKYSSGMRAKLGFSINITVNPDILVIDEALSVGDQT 177 (264)
T ss_pred HHHHHHHHHHcCCCHHHHHHHHHHHHHHcCCchhhcCC-----cccCCHHHHHHHHHHHHHhhCCCEEEEeCccccCCHH
Confidence 99998754332 2222 2234567777776655543 3479999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCcchhHHHHHHH
Q 045902 1057 AAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGRQSHKLVEYFE 1120 (1472)
Q Consensus 1057 ~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~~~~~~~~~f~ 1120 (1472)
++..+++.|+++.+.|+|||+++|++. ++.+.+|++++|.+ |+++..|+.++..+...+||.
T Consensus 178 ~~~~l~~~L~~~~~~g~tiIiisH~~~-~i~~~~d~i~~l~~-G~i~~~g~~~~~~~~~~~~~~ 239 (264)
T PRK13546 178 FAQKCLDKIYEFKEQNKTIFFVSHNLG-QVRQFCTKIAWIEG-GKLKDYGELDDVLPKYEAFLN 239 (264)
T ss_pred HHHHHHHHHHHHHHCCCEEEEEcCCHH-HHHHHcCEEEEEEC-CEEEEeCCHHHHHHHhHHHHH
Confidence 999999999999877999999999975 46678999999985 788888876433233334443
No 469
>COG4598 HisP ABC-type histidine transport system, ATPase component [Amino acid transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=282.87 Aligned_cols=205 Identities=22% Similarity=0.356 Sum_probs=169.2
Q ss_pred ccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC-------------h---hccc
Q 045902 899 EENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK-------------Q---ETFA 962 (1472)
Q Consensus 899 ~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~-------------~---~~~~ 962 (1472)
.++...+|++||++.+.|+++.|+|.|||||||+|+||.-+.+ +..|.|.+||..+. . ...+
T Consensus 15 ~~G~~eVLKGvSL~A~~GdVisIIGsSGSGKSTfLRCiN~LE~--P~~G~I~v~geei~~k~~~~G~l~~ad~~q~~r~R 92 (256)
T COG4598 15 RYGEHEVLKGVSLQANAGDVISIIGSSGSGKSTFLRCINFLEK--PSAGSIRVNGEEIRLKRDKDGQLKPADKRQLQRLR 92 (256)
T ss_pred hcccchhhcceeeecCCCCEEEEecCCCCchhHHHHHHHhhcC--CCCceEEECCeEEEeeeCCCCCeeeCCHHHHHHHH
Confidence 3456789999999999999999999999999999999997765 45899999996431 1 1223
Q ss_pred ceeEEeccCCCCCCCCCHHHHHHHHH--HcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhC
Q 045902 963 RISGYCEQNDIHSPNVTIYESLLYSA--WLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVAN 1040 (1472)
Q Consensus 963 ~~~gyv~Q~~~~~~~lTv~e~l~~~~--~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~ 1040 (1472)
...|+|+|+..++..+||.||+.-.- -+..++.+.++.+...|...++.++....| ..|||||+||++|||||+.+
T Consensus 93 s~L~mVFQ~FNLWsHmtvLeNViEaPvhVLg~~k~ea~e~Ae~~L~kVGi~ek~~~YP--~~LSGGQQQR~aIARaLame 170 (256)
T COG4598 93 TRLGMVFQHFNLWSHMTVLENVIEAPVHVLGVSKAEAIERAEKYLAKVGIAEKADAYP--AHLSGGQQQRVAIARALAME 170 (256)
T ss_pred HHhhHhhhhcchhHHHHHHHHHHhcchHhhcCCHHHHHHHHHHHHHHhCchhhhhcCc--cccCchHHHHHHHHHHHhcC
Confidence 45799999999999999999986432 234555566666655555555555554444 47999999999999999999
Q ss_pred CCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCC
Q 045902 1041 PSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLG 1109 (1472)
Q Consensus 1041 p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~ 1109 (1472)
|+++++|||||+|||+-.-++++.+++++++|+|.+++||.+.. .-+...+++.|.+ |.+...||+.
T Consensus 171 P~vmLFDEPTSALDPElVgEVLkv~~~LAeEgrTMv~VTHEM~F-AR~Vss~v~fLh~-G~iEE~G~P~ 237 (256)
T COG4598 171 PEVMLFDEPTSALDPELVGEVLKVMQDLAEEGRTMVVVTHEMGF-ARDVSSHVIFLHQ-GKIEEEGPPE 237 (256)
T ss_pred CceEeecCCcccCCHHHHHHHHHHHHHHHHhCCeEEEEeeehhH-HHhhhhheEEeec-ceecccCChH
Confidence 99999999999999999999999999999999999999998763 5566789999986 7999999873
No 470
>PRK10982 galactose/methyl galaxtoside transporter ATP-binding protein; Provisional
Probab=100.00 E-value=9e-33 Score=345.60 Aligned_cols=200 Identities=25% Similarity=0.352 Sum_probs=169.0
Q ss_pred cceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCCCCCCC
Q 045902 902 RLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQNDIHSPN 977 (1472)
Q Consensus 902 ~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~~~~~~ 977 (1472)
++.+|+||||++++||++||+||||||||||+++|+|..+ +.+|+|.++|.++.. ...++.++|++|++.+++.
T Consensus 10 ~~~il~~vs~~i~~Ge~~~liG~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~ 87 (491)
T PRK10982 10 GVKALDNVNLKVRPHSIHALMGENGAGKSTLLKCLFGIYQ--KDSGSILFQGKEIDFKSSKEALENGISMVHQELNLVLQ 87 (491)
T ss_pred CEEeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHcCCCC--CCceEEEECCEECCCCCHHHHHhCCEEEEecccccccC
Confidence 3579999999999999999999999999999999999876 358999999987532 2234578999999988899
Q ss_pred CCHHHHHHHHHH-cCC---Cch---HHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCC
Q 045902 978 VTIYESLLYSAW-LRL---PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPT 1050 (1472)
Q Consensus 978 lTv~e~l~~~~~-l~~---~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPT 1050 (1472)
+||.|++.+... .+. +.+ ..++++++.+++.+..++.+ ..|||||||||+||++|+.+|++|+|||||
T Consensus 88 ~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~-----~~LSgGq~qrv~lA~al~~~p~lllLDEPt 162 (491)
T PRK10982 88 RSVMDNMWLGRYPTKGMFVDQDKMYRDTKAIFDELDIDIDPRAKV-----ATLSVSQMQMIEIAKAFSYNAKIVIMDEPT 162 (491)
T ss_pred CCHHHHhhcccccccccccCHHHHHHHHHHHHHHcCCCCCccCch-----hhCCHHHHHHHHHHHHHHhCCCEEEEeCCC
Confidence 999999987532 111 111 34667788888876655543 479999999999999999999999999999
Q ss_pred CCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCCCc
Q 045902 1051 SGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPLGR 1110 (1472)
Q Consensus 1051 sgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~~~ 1110 (1472)
+|||+.++..+.+.|+++++.|+|||++||+++ ++.+.||++++|++ |+++..|+...
T Consensus 163 ~~LD~~~~~~l~~~l~~l~~~g~tvii~tH~~~-~~~~~~d~i~~l~~-G~i~~~~~~~~ 220 (491)
T PRK10982 163 SSLTEKEVNHLFTIIRKLKERGCGIVYISHKME-EIFQLCDEITILRD-GQWIATQPLAG 220 (491)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEEecCHH-HHHHhCCEEEEEEC-CEEEeecChhh
Confidence 999999999999999999888999999999976 46778999999985 78999888654
No 471
>PRK14266 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=2.6e-32 Score=311.95 Aligned_cols=213 Identities=23% Similarity=0.328 Sum_probs=167.4
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCC--C-CeeEEEEEEcCc
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKT--G-GYIEGSISISGY 954 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~--~-~~~~G~i~i~G~ 954 (1472)
+.++|+++.+ +++.+|+|+|++|++||+++|+||||||||||+++|+|... + .+.+|+|.++|.
T Consensus 4 l~~~~v~~~~-------------~~~~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~~G~v~~~g~ 70 (250)
T PRK14266 4 IEVENLNTYF-------------DDAHILKNVNLDIPKNSVTALIGPSGCGKSTFIRTLNRMNDLIPGFRHEGHIYLDGV 70 (250)
T ss_pred EEEEeEEEEe-------------CCeEEEeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhhccCCCCCCccEEEECCE
Confidence 5567776543 23469999999999999999999999999999999999743 1 125899999998
Q ss_pred cCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cch---HHHHHHHHHcccccccccccCCCCCCCCC
Q 045902 955 PKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMKALRNSLVGLPGVDGLS 1024 (1472)
Q Consensus 955 ~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~~~~~~~~~~~~~~~LS 1024 (1472)
++.. ...++.++|++|++.+++. |+.||+.+...... ..+ ..+.++++.+++......... .....||
T Consensus 71 ~i~~~~~~~~~~~~~i~~~~q~~~~~~~-t~~~nl~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~~-~~~~~LS 148 (250)
T PRK14266 71 DIYDPAVDVVELRKKVGMVFQKPNPFPK-SIFDNVAYGLRIHGEDDEDFIEERVEESLKAAALWDEVKDKLD-KSALGLS 148 (250)
T ss_pred EcccccccHHHHhhheEEEecCCccCcc-hHHHHHHhHHhhcCCCCHHHHHHHHHHHHHHcCCchhHHHHHh-CCcccCC
Confidence 7532 2345679999999988875 99999987643221 111 234556677666432111111 1245799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1025 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1025 gGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
+|||||++||++|+.+|++|+|||||+|||+.++..+.+.|+++++ |+|||+++|++. ++.+.+|++++|.+ |++++
T Consensus 149 ~Gq~qrv~laral~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~~-~~tiii~sh~~~-~~~~~~~~i~~l~~-G~i~~ 225 (250)
T PRK14266 149 GGQQQRLCIARTIAVSPEVILMDEPCSALDPISTTKIEDLIHKLKE-DYTIVIVTHNMQ-QATRVSKYTSFFLN-GEIIE 225 (250)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CCeEEEEECCHH-HHHhhcCEEEEEEC-CeEEE
Confidence 9999999999999999999999999999999999999999999964 899999999986 57788999999975 78998
Q ss_pred EcCC
Q 045902 1105 AGPL 1108 (1472)
Q Consensus 1105 ~g~~ 1108 (1472)
.|+.
T Consensus 226 ~g~~ 229 (250)
T PRK14266 226 SGLT 229 (250)
T ss_pred eCCH
Confidence 8875
No 472
>COG4148 ModC ABC-type molybdate transport system, ATPase component [Inorganic ion transport and metabolism]
Probab=100.00 E-value=3.1e-33 Score=301.81 Aligned_cols=195 Identities=27% Similarity=0.444 Sum_probs=169.7
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-----C--CceEEEEcCCCCCCCCCC
Q 045902 191 DVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-----P--QRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 191 ~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-----~--~~~~~yv~Q~d~~~~~lT 263 (1472)
++++..+.--+|||-|+||||||||+|+|+|+..|+ +|.|.+||..+.+.. | +|.+|||+|+-.+||++|
T Consensus 16 ~a~~~~p~~GvTAlFG~SGsGKTslin~IaGL~rPd---eG~I~lngr~L~Ds~k~i~lp~~~RriGYVFQDARLFpH~t 92 (352)
T COG4148 16 DANFTLPARGITALFGPSGSGKTSLINMIAGLTRPD---EGRIELNGRVLVDAEKGIFLPPEKRRIGYVFQDARLFPHYT 92 (352)
T ss_pred EEeccCCCCceEEEecCCCCChhhHHHHHhccCCcc---ccEEEECCEEeecccCCcccChhhheeeeEeeccccccceE
Confidence 677777765899999999999999999999999998 999999998764421 2 488999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+-||.|+.... . ....|.+.+.||++|..+.+...
T Consensus 93 VrgNL~YG~~~~------------~----------------------------~~~fd~iv~lLGI~hLL~R~P~~---- 128 (352)
T COG4148 93 VRGNLRYGMWKS------------M----------------------------RAQFDQLVALLGIEHLLDRYPGT---- 128 (352)
T ss_pred Eecchhhhhccc------------c----------------------------hHhHHHHHHHhCcHHHHhhCCCc----
Confidence 999999874311 0 00136788999999999876654
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
|||||||||+|||||++.|++|+||||.+.||-....+++-+|.+++++.+.-++-..| -..|+.+++|+|++|++|+
T Consensus 129 -LSGGEkQRVAIGRALLt~P~LLLmDEPLaSLD~~RK~EilpylERL~~e~~IPIlYVSH-S~~Ev~RLAd~vV~le~Gk 206 (352)
T COG4148 129 -LSGGEKQRVAIGRALLTAPELLLMDEPLASLDLPRKREILPYLERLRDEINIPILYVSH-SLDEVLRLADRVVVLENGK 206 (352)
T ss_pred -cCcchhhHHHHHHHHhcCCCeeeecCchhhcccchhhHHHHHHHHHHHhcCCCEEEEec-CHHHHHhhhheEEEecCCe
Confidence 99999999999999999999999999999999999999999999999887777776655 4569999999999999999
Q ss_pred EEEecChhHHH
Q 045902 424 IVYQGPREYVL 434 (1472)
Q Consensus 424 iv~~G~~~~~~ 434 (1472)
+...|+.+++.
T Consensus 207 V~A~g~~e~v~ 217 (352)
T COG4148 207 VKASGPLEEVW 217 (352)
T ss_pred EEecCcHHHHh
Confidence 99999999875
No 473
>PRK14239 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.3e-32 Score=310.53 Aligned_cols=210 Identities=22% Similarity=0.344 Sum_probs=162.2
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCeeCCCC-----CCCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD--KSLRVSGRVTYCGHELTEF-----VPQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 259 (1472)
.+|+|+|+++++||+++|+|||||||||||++|+|..+ |+...+|+|.++|+++... ..++.++|++|++.++
T Consensus 19 ~~l~~~s~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~p~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~v~q~~~~~ 98 (252)
T PRK14239 19 KALNSVSLDFYPNEITALIGPSGSGKSTLLRSINRMNDLNPEVTITGSIVYNGHNIYSPRTDTVDLRKEIGMVFQQPNPF 98 (252)
T ss_pred eeeeeeeEEEcCCcEEEEECCCCCCHHHHHHHHhcccccCCCCCccceEEECCEECcCcccchHhhhhcEEEEecCCccC
Confidence 58999999999999999999999999999999999853 4222379999999987432 1245799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccC
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGN 339 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~ 339 (1472)
+ +||+||+.+.....+.... ...+ ..++.+++.+|+.....+.. +
T Consensus 99 ~-~tv~enl~~~~~~~~~~~~-------------------~~~~--------------~~~~~~l~~~~l~~~~~~~~-~ 143 (252)
T PRK14239 99 P-MSIYENVVYGLRLKGIKDK-------------------QVLD--------------EAVEKSLKGASIWDEVKDRL-H 143 (252)
T ss_pred c-CcHHHHHHHHHHHcCCCcH-------------------HHHH--------------HHHHHHHHHcCCchhHHHHH-h
Confidence 7 8999999876432211000 0000 01234566666642111111 2
Q ss_pred ccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEe
Q 045902 340 EMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILL 419 (1472)
Q Consensus 340 ~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL 419 (1472)
.....|||||||||+||+||+.+|++|+|||||+|||..++..+.+.|+++.+ +.|+|++.|++ .++.+.+|++++|
T Consensus 144 ~~~~~LS~G~~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tii~~sH~~-~~~~~~~d~i~~l 220 (252)
T PRK14239 144 DSALGLSGGQQQRVCIARVLATSPKIILLDEPTSALDPISAGKIEETLLGLKD--DYTMLLVTRSM-QQASRISDRTGFF 220 (252)
T ss_pred cCcccCCHHHHHHHHHHHHHhcCCCEEEEcCCccccCHHHHHHHHHHHHHHhh--CCeEEEEECCH-HHHHHhCCEEEEE
Confidence 33456999999999999999999999999999999999999999999999864 47888877765 4778899999999
Q ss_pred cCCeEEEecChhHHH
Q 045902 420 SEGEIVYQGPREYVL 434 (1472)
Q Consensus 420 ~~G~iv~~G~~~~~~ 434 (1472)
++|++++.|+.+++.
T Consensus 221 ~~G~i~~~g~~~~~~ 235 (252)
T PRK14239 221 LDGDLIEYNDTKQMF 235 (252)
T ss_pred ECCEEEEeCCHHHHH
Confidence 999999999988763
No 474
>PRK14246 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.1e-32 Score=311.78 Aligned_cols=213 Identities=23% Similarity=0.327 Sum_probs=167.1
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC----eeEEEEEEcC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG----YIEGSISISG 953 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~----~~~G~i~i~G 953 (1472)
+.++++++.+ +++.+|+|+||++++||+++|+||||||||||+++|+|...+. .+.|++.++|
T Consensus 11 i~~~~~~~~~-------------~~~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~iaG~~~~~~G~v~~~G~~~~~g 77 (257)
T PRK14246 11 FNISRLYLYI-------------NDKAILKDITIKIPNNSIFGIMGPSGSGKSTLLKVLNRLIEIYDSKIKVDGKVLYFG 77 (257)
T ss_pred eeeeeEEEec-------------CCceeEeceEEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCCcCceeEcCEEEECC
Confidence 6667776553 3457999999999999999999999999999999999986532 1235566666
Q ss_pred ccCC---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCC--Cch---HHHHHHHHHccccccc-ccccCCCCCCCCC
Q 045902 954 YPKK---QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRL--PKD---MFVEEVMELVEMKALR-NSLVGLPGVDGLS 1024 (1472)
Q Consensus 954 ~~~~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~--~~~---~~~~~v~~~l~l~~~~-~~~~~~~~~~~LS 1024 (1472)
.+.. ....++.++|++|++.+++.+|++||+.+...... +.+ ..++++++.+++.... +.... .+..||
T Consensus 78 ~~~~~~~~~~~~~~i~~~~q~~~~~~~~tv~~nl~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~--~~~~LS 155 (257)
T PRK14246 78 KDIFQIDAIKLRKEVGMVFQQPNPFPHLSIYDNIAYPLKSHGIKEKREIKKIVEECLRKVGLWKEVYDRLNS--PASQLS 155 (257)
T ss_pred cccccCCHHHHhcceEEEccCCccCCCCcHHHHHHHHHHhcCCCCHHHHHHHHHHHHHHcCCCccchhhhcC--CcccCC
Confidence 6542 22345678999999999999999999988654321 111 2356677777774311 11112 235799
Q ss_pred HHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEE
Q 045902 1025 TEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIY 1104 (1472)
Q Consensus 1025 gGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~ 1104 (1472)
+|||||++|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ ++|||++||+++ .+.+.||++++|.+ |+++.
T Consensus 156 ~G~~qrl~laral~~~P~llllDEPt~~LD~~~~~~l~~~l~~~~~-~~tiilvsh~~~-~~~~~~d~v~~l~~-g~i~~ 232 (257)
T PRK14246 156 GGQQQRLTIARALALKPKVLLMDEPTSMIDIVNSQAIEKLITELKN-EIAIVIVSHNPQ-QVARVADYVAFLYN-GELVE 232 (257)
T ss_pred HHHHHHHHHHHHHHcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc-CcEEEEEECCHH-HHHHhCCEEEEEEC-CEEEE
Confidence 9999999999999999999999999999999999999999999965 699999999976 46688999999985 78888
Q ss_pred EcCC
Q 045902 1105 AGPL 1108 (1472)
Q Consensus 1105 ~g~~ 1108 (1472)
.|+.
T Consensus 233 ~g~~ 236 (257)
T PRK14246 233 WGSS 236 (257)
T ss_pred ECCH
Confidence 8875
No 475
>TIGR01846 type_I_sec_HlyB type I secretion system ABC transporter, HlyB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion.
Probab=100.00 E-value=1.6e-32 Score=356.90 Aligned_cols=208 Identities=27% Similarity=0.396 Sum_probs=170.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+.+|+|+|+.++||+.++|+|+||||||||+|+|+|.++|+ +|+|.+||++++++.. ++.++||+|++.+++ .
T Consensus 470 ~~il~~i~l~i~~G~~vaivG~sGsGKSTL~~ll~g~~~p~---~G~I~idg~~i~~~~~~~~r~~i~~v~q~~~lf~-~ 545 (694)
T TIGR01846 470 PEVLSNLNLDIKPGEFIGIVGPSGSGKSTLTKLLQRLYTPQ---HGQVLVDGVDLAIADPAWLRRQMGVVLQENVLFS-R 545 (694)
T ss_pred ccccccceEEECCCCEEEEECCCCCCHHHHHHHHhcCCCCC---CceEEECCEehhhCCHHHHHHhCeEEccCCeehh-h
Confidence 35899999999999999999999999999999999999998 8999999999987754 467999999988875 6
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++|||.++... . +++++.+..+.+. .+..++ .|++..||.+|+ .+
T Consensus 546 ti~eNi~~~~~~----~------------------~~~~i~~a~~~~~---------l~~~i~--~lp~gl~t~i~~-~g 591 (694)
T TIGR01846 546 SIRDNIALCNPG----A------------------PFEHVIHAAKLAG---------AHDFIS--ELPQGYNTEVGE-KG 591 (694)
T ss_pred hHHHHHhcCCCC----C------------------CHHHHHHHHHHcC---------hHHHHH--hCcCccCcEecC-CC
Confidence 999999774210 0 0111122111111 122222 345567899985 57
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
.+||||||||++||||++.+|++++|||||++||+.++..+.+.|+++. .++|+|++.|++. ..+.+|+|++|++|
T Consensus 592 ~~LSgGq~qri~lARall~~~~ililDEpts~LD~~~~~~i~~~l~~~~--~~~t~i~itH~~~--~~~~~d~ii~l~~G 667 (694)
T TIGR01846 592 ANLSGGQRQRIAIARALVGNPRILIFDEATSALDYESEALIMRNMREIC--RGRTVIIIAHRLS--TVRACDRIIVLEKG 667 (694)
T ss_pred CCCCHHHHHHHHHHHHHHhCCCEEEEECCCcCCCHHHHHHHHHHHHHHh--CCCEEEEEeCChH--HHHhCCEEEEEeCC
Confidence 7899999999999999999999999999999999999999999999874 4789999888774 55679999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
+++++|+++++.+
T Consensus 668 ~i~~~g~~~~l~~ 680 (694)
T TIGR01846 668 QIAESGRHEELLA 680 (694)
T ss_pred EEEEeCCHHHHHH
Confidence 9999999998864
No 476
>cd03297 ABC_ModC_molybdenum_transporter ModC is an ABC-type transporter and the ATPase component of a molybdate transport system that also includes the periplasmic binding protein ModA and the membrane protein ModB. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=2e-32 Score=305.38 Aligned_cols=192 Identities=26% Similarity=0.410 Sum_probs=160.0
Q ss_pred ceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCC-------CCceEEEEcCCCCCCCCCC
Q 045902 191 DVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFV-------PQRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 191 ~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~-------~~~~~~yv~Q~d~~~~~lT 263 (1472)
|+|+.+++ |+++|+||||||||||+++|+|.++|+ +|+|.++|.++.... .++.++|++|++.+++.+|
T Consensus 16 ~vsl~i~~-e~~~i~G~nGsGKSTLl~~l~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~~t 91 (214)
T cd03297 16 KIDFDLNE-EVTGIFGASGAGKSTLLRCIAGLEKPD---GGTIVLNGTVLFDSRKKINLPPQQRKIGLVFQQYALFPHLN 91 (214)
T ss_pred CceEEEcc-eeEEEECCCCCCHHHHHHHHhCCCCCC---CceEEECCEecccccchhhhhhHhhcEEEEecCCccCCCCC
Confidence 99999999 999999999999999999999999887 899999999875321 1357999999999999999
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
|+||+.+...... . ... ....+.+++.+||++..++.++
T Consensus 92 ~~~~l~~~~~~~~-----~------~~~-------------------------~~~~~~~l~~~~l~~~~~~~~~----- 130 (214)
T cd03297 92 VRENLAFGLKRKR-----N------RED-------------------------RISVDELLDLLGLDHLLNRYPA----- 130 (214)
T ss_pred HHHHHHHHHhhCC-----H------HHH-------------------------HHHHHHHHHHcCCHhHhhcCcc-----
Confidence 9999987532100 0 000 0013457888899876666554
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
.||||||||++||++++.+|++++|||||+|||+.++..+.+.|+++++..+.|+|++.|++ .++.+++|++++|++|+
T Consensus 131 ~LS~G~~qrv~la~al~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~~~~~tiii~sH~~-~~~~~~~d~i~~l~~G~ 209 (214)
T cd03297 131 QLSGGEKQRVALARALAAQPELLLLDEPFSALDRALRLQLLPELKQIKKNLNIPVIFVTHDL-SEAEYLADRIVVMEDGR 209 (214)
T ss_pred cCCHHHHHHHHHHHHHhcCCCEEEEcCCcccCCHHHHHHHHHHHHHHHHHcCcEEEEEecCH-HHHHHhcCEEEEEECCE
Confidence 49999999999999999999999999999999999999999999999775578888887765 46778999999999999
Q ss_pred EEEec
Q 045902 424 IVYQG 428 (1472)
Q Consensus 424 iv~~G 428 (1472)
++.+|
T Consensus 210 i~~~g 214 (214)
T cd03297 210 LQYIG 214 (214)
T ss_pred EEecC
Confidence 98875
No 477
>PRK11288 araG L-arabinose transporter ATP-binding protein; Provisional
Probab=100.00 E-value=1.5e-32 Score=344.30 Aligned_cols=208 Identities=28% Similarity=0.382 Sum_probs=172.3
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+ +++.+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.++.
T Consensus 5 l~~~~l~~~~-------------~~~~il~~isl~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~--p~~G~I~~~g~~i~ 69 (501)
T PRK11288 5 LSFDGIGKTF-------------PGVKALDDISFDCRAGQVHALMGENGAGKSTLLKILSGNYQ--PDAGSILIDGQEMR 69 (501)
T ss_pred EEEeeeEEEE-------------CCEEEEeeeeEEEeCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCCEEEECCEECC
Confidence 5677776654 23469999999999999999999999999999999999876 35899999998753
Q ss_pred h----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC----CCc---hHHHHHHHHHcccccccccccCCCCCCCCCHH
Q 045902 958 Q----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR----LPK---DMFVEEVMELVEMKALRNSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 958 ~----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~----~~~---~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgG 1026 (1472)
. ..+++.+||++|++.+++.+||.||+.+..... .+. ...++++++.+++.+..+.. +..||||
T Consensus 70 ~~~~~~~~~~~i~~v~q~~~~~~~~tv~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~-----~~~LSgG 144 (501)
T PRK11288 70 FASTTAALAAGVAIIYQELHLVPEMTVAENLYLGQLPHKGGIVNRRLLNYEAREQLEHLGVDIDPDTP-----LKYLSIG 144 (501)
T ss_pred CCCHHHHHhCCEEEEEechhccCCCCHHHHHHhcccccccCCCCHHHHHHHHHHHHHHcCCCCCcCCc-----hhhCCHH
Confidence 2 223567899999998999999999998753211 111 13466778888886555544 3479999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||++||++|+.+|++|+|||||+|||+.++..+.+.|++++++|+|||++||+++ ++.+.||++++|++ |+++..+
T Consensus 145 q~qrv~laral~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~g~tiiiitHd~~-~~~~~~d~i~~l~~-G~i~~~~ 222 (501)
T PRK11288 145 QRQMVEIAKALARNARVIAFDEPTSSLSAREIEQLFRVIRELRAEGRVILYVSHRME-EIFALCDAITVFKD-GRYVATF 222 (501)
T ss_pred HHHHHHHHHHHHhCCCEEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHH-HHHHhCCEEEEEEC-CEEEeec
Confidence 999999999999999999999999999999999999999999878999999999976 46778999999986 6777666
Q ss_pred C
Q 045902 1107 P 1107 (1472)
Q Consensus 1107 ~ 1107 (1472)
+
T Consensus 223 ~ 223 (501)
T PRK11288 223 D 223 (501)
T ss_pred C
Confidence 4
No 478
>TIGR01193 bacteriocin_ABC ABC-type bacteriocin transporter. This model describes ABC-type bacteriocin transporter. The amino terminal domain (pfam03412) processes the N-terminal leader peptide from the bacteriocin while C-terminal domains resemble ABC transporter membrane protein and ATP-binding cassette domain. In general, bacteriocins are agents which are responsible for killing or inhibiting the closely related species or even different strains of the same species. Bacteriocins are usually encoded by bacterial plasmids. Bacteriocins are named after the species and hence in literature one encounters various names e.g., leucocin from Leuconostic geldium; pedicocin from Pedicoccus acidilactici; sakacin from Lactobacillus sake etc.
Probab=100.00 E-value=6.5e-33 Score=361.70 Aligned_cols=210 Identities=24% Similarity=0.363 Sum_probs=175.4
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.+.++|+++.++ +++.+|+|+|++|+|||.+||+||||||||||+++|+|..+ +.+|+|.+||.++
T Consensus 473 ~I~~~~vsf~y~------------~~~~iL~~isl~i~~G~~vaIvG~SGsGKSTLlklL~gl~~--p~~G~I~idg~~i 538 (708)
T TIGR01193 473 DIVINDVSYSYG------------YGSNILSDISLTIKMNSKTTIVGMSGSGKSTLAKLLVGFFQ--ARSGEILLNGFSL 538 (708)
T ss_pred cEEEEEEEEEcC------------CCCcceeceeEEECCCCEEEEECCCCCCHHHHHHHHhccCC--CCCcEEEECCEEH
Confidence 588999988763 12469999999999999999999999999999999999887 4589999999886
Q ss_pred C---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc-------ccccCCCCCCCCCHH
Q 045902 957 K---QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR-------NSLVGLPGVDGLSTE 1026 (1472)
Q Consensus 957 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~-------~~~~~~~~~~~LSgG 1026 (1472)
. ...+++.+|||+|++.+++. |++||+.+.... ...++.+.++++..++.+.. |+.++.. ..+||||
T Consensus 539 ~~~~~~~lr~~i~~v~Q~~~lf~g-TI~eNi~l~~~~-~~~~~~i~~a~~~a~l~~~i~~lp~gldt~i~e~-G~~LSgG 615 (708)
T TIGR01193 539 KDIDRHTLRQFINYLPQEPYIFSG-SILENLLLGAKE-NVSQDEIWAACEIAEIKDDIENMPLGYQTELSEE-GSSISGG 615 (708)
T ss_pred HHcCHHHHHHheEEEecCceehhH-HHHHHHhccCCC-CCCHHHHHHHHHHhCCHHHHHhcccccCcEecCC-CCCCCHH
Confidence 4 35677889999999998865 999999875321 12234566677766665432 4555543 3579999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||++|||||+++|+||+||||||+||+.+++.+++.|+++ +|+|+|+++|+++ ..+.+|++++|++ |+++..|
T Consensus 616 QrQRialARall~~p~iliLDE~Ts~LD~~te~~i~~~L~~~--~~~T~IiitHr~~--~~~~~D~i~~l~~-G~i~~~G 690 (708)
T TIGR01193 616 QKQRIALARALLTDSKVLILDESTSNLDTITEKKIVNNLLNL--QDKTIIFVAHRLS--VAKQSDKIIVLDH-GKIIEQG 690 (708)
T ss_pred HHHHHHHHHHHhhCCCEEEEeCccccCCHHHHHHHHHHHHHh--cCCEEEEEecchH--HHHcCCEEEEEEC-CEEEEEC
Confidence 999999999999999999999999999999999999999985 4799999999975 5688999999985 7899999
Q ss_pred CC
Q 045902 1107 PL 1108 (1472)
Q Consensus 1107 ~~ 1108 (1472)
+.
T Consensus 691 ~~ 692 (708)
T TIGR01193 691 SH 692 (708)
T ss_pred CH
Confidence 84
No 479
>PRK14259 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.7e-32 Score=313.44 Aligned_cols=205 Identities=21% Similarity=0.315 Sum_probs=160.5
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCeeCCCC--C---CCceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSL--RVSGRVTYCGHELTEF--V---PQRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~--~---~~~~~~yv~Q~d~~ 258 (1472)
+.+|+|+|++|++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|+++... . .++.++|++|++.+
T Consensus 26 ~~il~~is~~i~~Ge~~~l~G~nGsGKSTLl~~l~Gl~~~~~~~p~~G~v~~~g~~i~~~~~~~~~~~~~i~~v~q~~~l 105 (269)
T PRK14259 26 FEAVKNVFCDIPRGKVTALIGPSGCGKSTVLRSLNRMNDLIEGCSLKGRVLFDGTDLYDPRVDPVEVRRRIGMVFQQPNP 105 (269)
T ss_pred EEEEcceEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEcccccCCHHHHhhceEEEccCCcc
Confidence 358999999999999999999999999999999999976310 1289999999987421 1 13569999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc----cccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD----ICAD 334 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 334 (1472)
++ .||+||+.+.+...+... +. .+ .++.+++.+++. +..|
T Consensus 106 ~~-~tv~enl~~~~~~~~~~~------~~--~~---------------------------~~~~~l~~~~l~~~l~~~~~ 149 (269)
T PRK14259 106 FP-KSIYENIAFGARINGYTG------DM--DE---------------------------LVERSLRKAAVWDECKDKLN 149 (269)
T ss_pred ch-hhHHHHHhhhhhhcCCcH------HH--HH---------------------------HHHHHHHHhCCcchhhhhhC
Confidence 87 599999988654321100 00 00 012345555553 2334
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccC
Q 045902 335 IMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFD 414 (1472)
Q Consensus 335 t~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD 414 (1472)
+. ...|||||||||+||+||+.+|++|+|||||+|||+.++..+.+.|+++++ +.|+|++.|++ .++.+++|
T Consensus 150 ~~-----~~~LS~G~~qrl~laral~~~p~lllLDEPt~gLD~~~~~~l~~~l~~~~~--~~tiiivtH~~-~~~~~~~d 221 (269)
T PRK14259 150 ES-----GYSLSGGQQQRLCIARTIAIEPEVILMDEPCSALDPISTLKIEETMHELKK--NFTIVIVTHNM-QQAVRVSD 221 (269)
T ss_pred CC-----cccCCHHHHHHHHHHHHHhcCCCEEEEcCCCccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhcC
Confidence 33 455999999999999999999999999999999999999999999999853 57888877765 47889999
Q ss_pred eEEEecC-----------CeEEEecChhHHH
Q 045902 415 DIILLSE-----------GEIVYQGPREYVL 434 (1472)
Q Consensus 415 ~iilL~~-----------G~iv~~G~~~~~~ 434 (1472)
++++|++ |++++.|+.+++.
T Consensus 222 ~i~~l~~~~~~~~~~g~~g~~~~~~~~~~~~ 252 (269)
T PRK14259 222 MTAFFNAEEVEGGSGGKVGYLVEFNETKKIF 252 (269)
T ss_pred EEEEEeccccccccccccceEEEeCCHHHHH
Confidence 9999996 6789999998874
No 480
>COG4987 CydC ABC-type transport system involved in cytochrome bd biosynthesis, fused ATPase and permease components [Energy production and conversion / Posttranslational modification, protein turnover, chaperones]
Probab=100.00 E-value=3.2e-33 Score=327.11 Aligned_cols=211 Identities=24% Similarity=0.361 Sum_probs=176.7
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPK 956 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~ 956 (1472)
.++++|+++.++. +..++|+|+|+++++||.+||+|+||||||||++.|+|... +.+|+|.++|.++
T Consensus 336 ~l~~~~vsF~y~~-----------~~~~~L~~~~l~l~~GEkvAIlG~SGsGKSTllqLl~~~~~--~~~G~i~~~g~~~ 402 (573)
T COG4987 336 ALELRNVSFTYPG-----------QQTKALKNFNLTLAQGEKVAILGRSGSGKSTLLQLLAGAWD--PQQGSITLNGVEI 402 (573)
T ss_pred eeeeccceeecCC-----------CccchhhccceeecCCCeEEEECCCCCCHHHHHHHHHhccC--CCCCeeeECCcCh
Confidence 6788898887742 23579999999999999999999999999999999999877 4589999999886
Q ss_pred C---hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccc-------cCCCCCCCCCHH
Q 045902 957 K---QETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSL-------VGLPGVDGLSTE 1026 (1472)
Q Consensus 957 ~---~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~-------~~~~~~~~LSgG 1026 (1472)
. +...++.+++++|...+|. -|+++||..+.. ...++.+.++++.+||.++.... +|. +.+.||||
T Consensus 403 ~~l~~~~~~e~i~vl~Qr~hlF~-~Tlr~NL~lA~~--~AsDEel~~aL~qvgL~~l~~~~p~gl~t~lge-~G~~LSGG 478 (573)
T COG4987 403 ASLDEQALRETISVLTQRVHLFS-GTLRDNLRLANP--DASDEELWAALQQVGLEKLLESAPDGLNTWLGE-GGRRLSGG 478 (573)
T ss_pred hhCChhhHHHHHhhhccchHHHH-HHHHHHHhhcCC--CCCHHHHHHHHHHcCHHHHHHhChhhhhchhcc-CCCcCCch
Confidence 3 3446778899999887764 599999986531 12345667788888887765443 333 35689999
Q ss_pred HHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEc
Q 045902 1027 QRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAG 1106 (1472)
Q Consensus 1027 qrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g 1106 (1472)
||||++|||+|++|.++++|||||.|||+.++++|++.|.+.++ |+|+|++||+.. -.+.||+|++|++ |+++..|
T Consensus 479 E~rRLAlAR~LL~dapl~lLDEPTegLD~~TE~~vL~ll~~~~~-~kTll~vTHrL~--~le~~drIivl~~-Gkiie~G 554 (573)
T COG4987 479 ERRRLALARALLHDAPLWLLDEPTEGLDPITERQVLALLFEHAE-GKTLLMVTHRLR--GLERMDRIIVLDN-GKIIEEG 554 (573)
T ss_pred HHHHHHHHHHHHcCCCeEEecCCcccCChhhHHHHHHHHHHHhc-CCeEEEEecccc--cHhhcCEEEEEEC-CeeeecC
Confidence 99999999999999999999999999999999999999998765 899999999964 6789999999985 7999988
Q ss_pred CC
Q 045902 1107 PL 1108 (1472)
Q Consensus 1107 ~~ 1108 (1472)
..
T Consensus 555 ~~ 556 (573)
T COG4987 555 TH 556 (573)
T ss_pred CH
Confidence 75
No 481
>KOG0066 consensus eIF2-interacting protein ABC50 (ABC superfamily) [Translation, ribosomal structure and biogenesis]
Probab=100.00 E-value=1.6e-31 Score=299.86 Aligned_cols=201 Identities=20% Similarity=0.322 Sum_probs=152.0
Q ss_pred ceEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCc
Q 045902 875 PLSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGY 954 (1472)
Q Consensus 875 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~ 954 (1472)
|..+..+++++-++ +.++++++++|-|.--..+||+||||.||||||++|.|.+.+ ..|+..-|
T Consensus 584 PPvLGlH~VtFgy~------------gqkpLFkkldFGiDmdSRiaIVGPNGVGKSTlLkLL~Gkl~P--~~GE~RKn-- 647 (807)
T KOG0066|consen 584 PPVLGLHDVTFGYP------------GQKPLFKKLDFGIDMDSRIAIVGPNGVGKSTLLKLLIGKLDP--NDGELRKN-- 647 (807)
T ss_pred CCeeecccccccCC------------CCCchhhcccccccccceeEEECCCCccHHHHHHHHhcCCCC--Ccchhhcc--
Confidence 44566777776542 356799999999999999999999999999999999998874 36665432
Q ss_pred cCChhcccceeEEeccCC--CCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHH
Q 045902 955 PKKQETFARISGYCEQND--IHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLT 1032 (1472)
Q Consensus 955 ~~~~~~~~~~~gyv~Q~~--~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~ 1032 (1472)
.+-.+|+..|.. .+-..-|..|.|.-. ..+|. +.....+-.+||...++++- +..||||||-||+
T Consensus 648 ------hrL~iG~FdQh~~E~L~~Eetp~EyLqr~--FNlpy-q~ARK~LG~fGL~sHAHTik----ikdLSGGQKaRVa 714 (807)
T KOG0066|consen 648 ------HRLRIGWFDQHANEALNGEETPVEYLQRK--FNLPY-QEARKQLGTFGLASHAHTIK----IKDLSGGQKARVA 714 (807)
T ss_pred ------ceeeeechhhhhHHhhccccCHHHHHHHh--cCCCh-HHHHHHhhhhhhhhccceEe----eeecCCcchHHHH
Confidence 233578888764 344556777776422 12332 23445566777777777653 4579999999999
Q ss_pred HHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1033 IAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1033 iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+|..-+..|+||||||||++||..+...+-+.|++. ...||+++||-.. +.+.-+.+.|+.+.|.-.-.|..
T Consensus 715 laeLal~~PDvlILDEPTNNLDIESIDALaEAIney---~GgVi~VsHDeRL-i~eT~C~LwVvE~Q~i~eIdGdF 786 (807)
T KOG0066|consen 715 LAELALGGPDVLILDEPTNNLDIESIDALAEAINEY---NGGVIMVSHDERL-IVETDCNLWVVENQGIDEIDGDF 786 (807)
T ss_pred HHHHhcCCCCEEEecCCCCCcchhhHHHHHHHHHhc---cCcEEEEecccce-eeecCceEEEEccCChhhccccH
Confidence 999999999999999999999999999999999887 4689999999664 55666778888776655555654
No 482
>cd03251 ABCC_MsbA MsbA is an essential ABC transporter, closely related to eukaryotic MDR proteins. ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=100.00 E-value=1.1e-32 Score=311.87 Aligned_cols=195 Identities=28% Similarity=0.381 Sum_probs=153.6
Q ss_pred eeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcccceeEEeccCCCCCCCCCH
Q 045902 904 QLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETFARISGYCEQNDIHSPNVTI 980 (1472)
Q Consensus 904 ~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~~~~~gyv~Q~~~~~~~lTv 980 (1472)
.+|+|+||++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|++.+++ .|+
T Consensus 16 ~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~--p~~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~tv 92 (234)
T cd03251 16 PVLRDISLDIPAGETVALVGPSGSGKSTLVNLIPRFYD--VDSGRILIDGHDVRDYTLASLRRQIGLVSQDVFLFN-DTV 92 (234)
T ss_pred cceeeeeEEEcCCCEEEEECCCCCCHHHHHHHHhcccc--CCCCEEEECCEEhhhCCHHHHHhhEEEeCCCCeecc-ccH
Confidence 69999999999999999999999999999999999876 458999999987532 234567899999988776 699
Q ss_pred HHHHHHHHHcCCCchHHHHHHHHHccccccccc-------ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCC
Q 045902 981 YESLLYSAWLRLPKDMFVEEVMELVEMKALRNS-------LVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGL 1053 (1472)
Q Consensus 981 ~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~-------~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgL 1053 (1472)
+||+.+..... .....++.++..++....+. ..+ ..+..||+|||||++||++|+.+|++|+|||||+||
T Consensus 93 ~enl~~~~~~~--~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~-~~~~~LS~G~~qrv~la~al~~~p~lllLDEP~~~L 169 (234)
T cd03251 93 AENIAYGRPGA--TREEVEEAARAANAHEFIMELPEGYDTVIG-ERGVKLSGGQRQRIAIARALLKDPPILILDEATSAL 169 (234)
T ss_pred HHHhhccCCCC--CHHHHHHHHHHcCcHHHHHhcccCcceeec-cCCCcCCHHHHHHHHHHHHHhcCCCEEEEeCccccC
Confidence 99997753211 11222222232222221111 111 124579999999999999999999999999999999
Q ss_pred CHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1054 DARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1054 D~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
|+.++..+.+.|+++.+ |+|||++||+++. + +.||++++|.+ |+++..|+.
T Consensus 170 D~~~~~~l~~~l~~~~~-~~tii~~sh~~~~-~-~~~d~v~~l~~-G~i~~~~~~ 220 (234)
T cd03251 170 DTESERLVQAALERLMK-NRTTFVIAHRLST-I-ENADRIVVLED-GKIVERGTH 220 (234)
T ss_pred CHHHHHHHHHHHHHhcC-CCEEEEEecCHHH-H-hhCCEEEEecC-CeEeeeCCH
Confidence 99999999999999964 8999999999863 4 45999999986 688888764
No 483
>PRK09544 znuC high-affinity zinc transporter ATPase; Reviewed
Probab=100.00 E-value=2.4e-32 Score=311.21 Aligned_cols=197 Identities=24% Similarity=0.354 Sum_probs=163.7
Q ss_pred EEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCC
Q 045902 878 LAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKK 957 (1472)
Q Consensus 878 ~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~ 957 (1472)
+.++|+++.+. ++.+|+|+||+|++||+++|+||||||||||+++|+|..+ +.+|+|.++|.
T Consensus 5 l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~I~G~NGsGKSTLl~~i~Gl~~--p~~G~i~~~~~--- 66 (251)
T PRK09544 5 VSLENVSVSFG-------------QRRVLSDVSLELKPGKILTLLGPNGAGKSTLVRVVLGLVA--PDEGVIKRNGK--- 66 (251)
T ss_pred EEEeceEEEEC-------------CceEEEeEEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCceEEEECCc---
Confidence 56777766542 3469999999999999999999999999999999999876 35899999872
Q ss_pred hhcccceeEEeccCCCCCCC--CCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHH
Q 045902 958 QETFARISGYCEQNDIHSPN--VTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAV 1035 (1472)
Q Consensus 958 ~~~~~~~~gyv~Q~~~~~~~--lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~ 1035 (1472)
+.++|++|++.+++. .|+.+++.+.. ...+..+.++++.+++.+..+... ..||||||||++||+
T Consensus 67 -----~~i~~v~q~~~~~~~l~~~~~~~~~~~~---~~~~~~~~~~l~~~gl~~~~~~~~-----~~LSgGq~qrv~lar 133 (251)
T PRK09544 67 -----LRIGYVPQKLYLDTTLPLTVNRFLRLRP---GTKKEDILPALKRVQAGHLIDAPM-----QKLSGGETQRVLLAR 133 (251)
T ss_pred -----cCEEEeccccccccccChhHHHHHhccc---cccHHHHHHHHHHcCChHHHhCCh-----hhCCHHHHHHHHHHH
Confidence 358999999877665 47888765421 112345678888888877666543 479999999999999
Q ss_pred HHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhC-CCEEEEEecCccHHHHHhhCeEEEEecCcEEEEEcCC
Q 045902 1036 ELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDT-GRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1036 aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~-g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
+|+.+|++|+|||||+|||+.++..+++.|++++++ |+|||++||+++ ++.+.+|++++|. + +++..|+.
T Consensus 134 al~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~~~g~tiiivsH~~~-~i~~~~d~i~~l~-~-~i~~~g~~ 204 (251)
T PRK09544 134 ALLNRPQLLVLDEPTQGVDVNGQVALYDLIDQLRRELDCAVLMVSHDLH-LVMAKTDEVLCLN-H-HICCSGTP 204 (251)
T ss_pred HHhcCCCEEEEeCCCcCCCHHHHHHHHHHHHHHHHhcCCEEEEEecCHH-HHHHhCCEEEEEC-C-ceEeeCCH
Confidence 999999999999999999999999999999999765 899999999976 4678899999995 4 57788875
No 484
>PRK14252 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.2e-32 Score=313.65 Aligned_cols=214 Identities=24% Similarity=0.310 Sum_probs=169.2
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCC---eeEEEEEEc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGG---YIEGSISIS 952 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~---~~~G~i~i~ 952 (1472)
..+.++|+++.++ ++.+|+|+|++|++||+++|+|+||||||||+++|+|...+. +.+|+|.++
T Consensus 15 ~~l~~~~l~~~~~-------------~~~vl~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~~~sG~i~~~ 81 (265)
T PRK14252 15 QKSEVNKLNFYYG-------------GYQALKNINMMVHEKQVTALIGPSGCGKSTFLRCFNRMHDLYPGNHYEGEIILH 81 (265)
T ss_pred ceEEEEEEEEEEC-------------CeeeeeeeEEEEcCCcEEEEECCCCCCHHHHHHHHhcccCCCCCCCcccEEEEc
Confidence 3477888876652 246999999999999999999999999999999999986531 258999999
Q ss_pred CccCC-------hhcccceeEEeccCCCCCCCCCHHHHHHHHHHcC-CCc----hHHHHHHHHHccccc-ccccccCCCC
Q 045902 953 GYPKK-------QETFARISGYCEQNDIHSPNVTIYESLLYSAWLR-LPK----DMFVEEVMELVEMKA-LRNSLVGLPG 1019 (1472)
Q Consensus 953 G~~~~-------~~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-~~~----~~~~~~v~~~l~l~~-~~~~~~~~~~ 1019 (1472)
|.+.. ...+++.++|++|++.+++. |++||+.+..... .+. ++.++++++.+++.. +.+.. . ..
T Consensus 82 g~~~~~~~~~~~~~~~~~~i~~~~q~~~~~~~-tv~eni~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~l~~~~-~-~~ 158 (265)
T PRK14252 82 PDNVNILSPEVDPIEVRMRISMVFQKPNPFPK-SIFENVAYGLRIRGVKRRSILEERVENALRNAALWDEVKDRL-G-DL 158 (265)
T ss_pred CccccccccccCHHHHhccEEEEccCCcCCcc-hHHHHHHhHHHHcCCChHHHHHHHHHHHHHHcCCchhhhHHH-h-CC
Confidence 97642 12345678999999988876 9999998764322 111 134456666666531 11111 1 11
Q ss_pred CCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1020 VDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1020 ~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
...||||||||++|||+|+.+|++|+|||||+|||+.++..+.+.|+++++ ++|||++||+++ ++.+.+|++++|++
T Consensus 159 ~~~LS~G~~qrv~laral~~~p~llllDEPt~gLD~~~~~~l~~~l~~l~~-~~tiiivth~~~-~~~~~~d~i~~l~~- 235 (265)
T PRK14252 159 AFNLSGGQQQRLCIARALATDPEILLFDEPTSALDPIATASIEELISDLKN-KVTILIVTHNMQ-QAARVSDYTAYMYM- 235 (265)
T ss_pred cccCCHHHHHHHHHHHHHHcCCCEEEEeCCCccCCHHHHHHHHHHHHHHHh-CCEEEEEecCHH-HHHHhCCEEEEEEC-
Confidence 357999999999999999999999999999999999999999999999975 699999999976 46788999999985
Q ss_pred cEEEEEcCC
Q 045902 1100 GHVIYAGPL 1108 (1472)
Q Consensus 1100 g~v~~~g~~ 1108 (1472)
|+++..|+.
T Consensus 236 G~i~~~g~~ 244 (265)
T PRK14252 236 GELIEFGAT 244 (265)
T ss_pred CEEEEeCCH
Confidence 788888875
No 485
>cd03215 ABC_Carb_Monos_II This family represents domain II of the carbohydrate uptake proteins that transport only monosaccharides (Monos). The Carb_Monos family is involved in the uptake of monosaccharides, such as pentoses (such as xylose, arabinose, and ribose) and hexoses (such as xylose, arabinose, and ribose), that cannot be broken down to simple sugars by hydrolysis. In members of Carb_Monos family the single hydrophobic gene product forms a homodimer, while the ABC protein represents a fusion of two nucleotide-binding domains. However, it is assumed that two copies of the ABC domains are present in the assembled transporter.
Probab=100.00 E-value=1.1e-32 Score=299.38 Aligned_cols=159 Identities=25% Similarity=0.466 Sum_probs=141.8
Q ss_pred eeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh----hcccceeEEeccCC---CCCCC
Q 045902 905 LLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ----ETFARISGYCEQND---IHSPN 977 (1472)
Q Consensus 905 iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~----~~~~~~~gyv~Q~~---~~~~~ 977 (1472)
+|+|+|+++++||+++|+||||||||||+++|+|..+ +.+|+|.++|.+... ...++.++|++|+. .+++.
T Consensus 15 ~l~~vs~~i~~G~~~~i~G~nGsGKSTLl~~l~G~~~--~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~~~ 92 (182)
T cd03215 15 AVRDVSFEVRAGEIVGIAGLVGNGQTELAEALFGLRP--PASGEITLDGKPVTRRSPRDAIRAGIAYVPEDRKREGLVLD 92 (182)
T ss_pred eecceEEEEcCCcEEEEECCCCCCHHHHHHHHhCCCC--CCCceEEECCEECCccCHHHHHhCCeEEecCCcccCcccCC
Confidence 8999999999999999999999999999999999876 358999999987643 23456799999984 57788
Q ss_pred CCHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHH
Q 045902 978 VTIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARA 1057 (1472)
Q Consensus 978 lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~ 1057 (1472)
+|++||+.+... ||+|||||++||+||+.+|++|+|||||+|||+.+
T Consensus 93 ~t~~e~l~~~~~---------------------------------LS~G~~qrl~la~al~~~p~llllDEP~~~LD~~~ 139 (182)
T cd03215 93 LSVAENIALSSL---------------------------------LSGGNQQKVVLARWLARDPRVLILDEPTRGVDVGA 139 (182)
T ss_pred CcHHHHHHHHhh---------------------------------cCHHHHHHHHHHHHHccCCCEEEECCCCcCCCHHH
Confidence 999999976421 89999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecC
Q 045902 1058 AAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRG 1099 (1472)
Q Consensus 1058 ~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~g 1099 (1472)
+..+.+.|+++.++|+|||+++|+++ ++.+.+|++++|++|
T Consensus 140 ~~~l~~~l~~~~~~~~tiii~sh~~~-~~~~~~d~v~~l~~G 180 (182)
T cd03215 140 KAEIYRLIRELADAGKAVLLISSELD-ELLGLCDRILVMYEG 180 (182)
T ss_pred HHHHHHHHHHHHHCCCEEEEEeCCHH-HHHHhCCEEEEecCC
Confidence 99999999999877899999999975 577789999999863
No 486
>PRK13547 hmuV hemin importer ATP-binding subunit; Provisional
Probab=100.00 E-value=3.3e-32 Score=313.36 Aligned_cols=212 Identities=27% Similarity=0.341 Sum_probs=169.2
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCC-----CCceeEEEEcCeeCCCCCC---CceEEEEcCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKS-----LRVSGRVTYCGHELTEFVP---QRTCAYISQHDL 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~-----~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~ 257 (1472)
+.+|+|+|+.|++||+++|+|||||||||||++|+|.++++ ...+|+|.++|+++..... ++.++|++|++.
T Consensus 14 ~~il~~vsl~i~~Ge~~~l~G~nGsGKSTLl~~laG~~~p~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~~v~q~~~ 93 (272)
T PRK13547 14 RAILRDLSLRIEPGRVTALLGRNGAGKSTLLKALAGDLTGGGAPRGARVTGDVTLNGEPLAAIDAPRLARLRAVLPQAAQ 93 (272)
T ss_pred EeEEecceEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCcccccccCCceEEEECCEEcccCCHHHHHhhcEEecccCC
Confidence 36999999999999999999999999999999999998764 1137999999998765432 345899999987
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMV 337 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~v 337 (1472)
.++.+||+||+.+....... .. +... .+. ...++.+++.+||++..++.+
T Consensus 94 ~~~~~tv~e~l~~~~~~~~~--~~-------------~~~~-~~~--------------~~~~~~~l~~~~l~~~~~~~~ 143 (272)
T PRK13547 94 PAFAFSAREIVLLGRYPHAR--RA-------------GALT-HRD--------------GEIAWQALALAGATALVGRDV 143 (272)
T ss_pred CCCCCcHHHHHhhccccccc--cc-------------ccCC-HHH--------------HHHHHHHHHHcCcHhhhcCCc
Confidence 67779999999875321000 00 0000 000 001345788899987666655
Q ss_pred cCccCCCCChHHHHHHHHHHHHh---------CCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcch
Q 045902 338 GNEMRRGISGGQKKRVTTGEMLV---------GPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPE 408 (1472)
Q Consensus 338 g~~~~~gLSGGqrkRvsia~aL~---------~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~ 408 (1472)
+ .|||||||||+||++|+ .+|++|+|||||+|||+.++..+.+.|+++++..+.|+|++.|++. +
T Consensus 144 ~-----~LSgG~~qrv~laral~~~~~~~~~~~~p~lllLDEPt~~LD~~~~~~l~~~l~~~~~~~~~tviiisH~~~-~ 217 (272)
T PRK13547 144 T-----TLSGGELARVQFARVLAQLWPPHDAAQPPRYLLLDEPTAALDLAHQHRLLDTVRRLARDWNLGVLAIVHDPN-L 217 (272)
T ss_pred c-----cCCHHHHHHHHHHHHHhccccccccCCCCCEEEEcCccccCCHHHHHHHHHHHHHHHHhcCCEEEEEECCHH-H
Confidence 4 49999999999999999 5999999999999999999999999999987655788888887754 6
Q ss_pred HHhccCeEEEecCCeEEEecChhHH
Q 045902 409 TYDLFDDIILLSEGEIVYQGPREYV 433 (1472)
Q Consensus 409 ~~~~fD~iilL~~G~iv~~G~~~~~ 433 (1472)
+.+++|++++|++|++++.|+.+++
T Consensus 218 ~~~~~d~i~~l~~G~i~~~g~~~~~ 242 (272)
T PRK13547 218 AARHADRIAMLADGAIVAHGAPADV 242 (272)
T ss_pred HHHhCCEEEEEECCeEEEecCHHHH
Confidence 7789999999999999999998776
No 487
>PRK09580 sufC cysteine desulfurase ATPase component; Reviewed
Probab=100.00 E-value=3.8e-32 Score=310.30 Aligned_cols=200 Identities=27% Similarity=0.330 Sum_probs=156.9
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hc-ccceeEEeccCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ET-FARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~-~~~~~gyv~Q~~~~~~~l 978 (1472)
+.+|+|+|++|++|+++||+||||||||||+++|+|..+..+.+|+|.++|.+... .. .++.++|++|++.+++.+
T Consensus 14 ~~~l~~isl~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~~~~~~G~i~~~g~~~~~~~~~~~~~~~i~~~~q~~~~~~~~ 93 (248)
T PRK09580 14 KAILRGLNLEVRPGEVHAIMGPNGSGKSTLSATLAGREDYEVTGGTVEFKGKDLLELSPEDRAGEGIFMAFQYPVEIPGV 93 (248)
T ss_pred eeeeecceeEEcCCCEEEEECCCCCCHHHHHHHHcCCccCCCCceEEEECCCccccCCHHHHhhcceEEEecCchhccch
Confidence 46999999999999999999999999999999999984211458999999987532 11 234689999999888888
Q ss_pred CHHHHHHHHH-Hc---CC----Cc---hHHHHHHHHHcccc-cccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccc
Q 045902 979 TIYESLLYSA-WL---RL----PK---DMFVEEVMELVEMK-ALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFM 1046 (1472)
Q Consensus 979 Tv~e~l~~~~-~l---~~----~~---~~~~~~v~~~l~l~-~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~L 1046 (1472)
|+.+++.+.. .+ +. .. .+.++++++.+++. +..+..+ ...||||||||++|||||+.+|++|+|
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~----~~~LS~G~~qrv~laral~~~p~illL 169 (248)
T PRK09580 94 SNQFFLQTALNAVRSYRGQEPLDRFDFQDLMEEKIALLKMPEDLLTRSV----NVGFSGGEKKRNDILQMAVLEPELCIL 169 (248)
T ss_pred hHHHHHHHhhhhhhcccccccchHHHHHHHHHHHHHHcCCChhhcccCC----CCCCCHHHHHHHHHHHHHHcCCCEEEE
Confidence 8777654321 11 00 00 13445667777763 3333332 126999999999999999999999999
Q ss_pred cCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHh-hCeEEEEecCcEEEEEcCC
Q 045902 1047 DEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEA-FDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1047 DEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~-~D~v~~l~~gg~v~~~g~~ 1108 (1472)
||||+|||+.++..+.+.|+++++.|+|||++||+++. +... +|++++|++ |++++.|+.
T Consensus 170 DEPt~~LD~~~~~~l~~~l~~l~~~~~tiii~sH~~~~-~~~~~~d~i~~l~~-g~i~~~g~~ 230 (248)
T PRK09580 170 DESDSGLDIDALKIVADGVNSLRDGKRSFIIVTHYQRI-LDYIKPDYVHVLYQ-GRIVKSGDF 230 (248)
T ss_pred eCCCccCCHHHHHHHHHHHHHHHhCCCEEEEEeCCHHH-HHhhhCCEEEEEEC-CeEEEeCCH
Confidence 99999999999999999999998778999999999763 4444 799999975 788898875
No 488
>PRK14244 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=4.1e-32 Score=310.40 Aligned_cols=212 Identities=19% Similarity=0.303 Sum_probs=165.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCC--CCCCceeEEEEcCeeCCCCC-----CCceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSD--KSLRVSGRVTYCGHELTEFV-----PQRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~--~~~~~~G~I~~~G~~~~~~~-----~~~~~~yv~Q~d~~ 258 (1472)
+.+|+|+|+.+++||+++|+||||||||||+++|+|..+ +....+|+|+++|+++.... .++.++|++|++.+
T Consensus 18 ~~~l~~is~~i~~Ge~~~I~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~i~~~~~~~~~~~~~i~~v~q~~~~ 97 (251)
T PRK14244 18 KQILFDINLDIYKREVTAFIGPSGCGKSTFLRCFNRMNDFVPNCKVKGELDIDGIDVYSVDTNVVLLRAKVGMVFQKPNP 97 (251)
T ss_pred eeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHHhhcccCCCCCcceEEEECCEehHhcccchHHHhhhEEEEecCccc
Confidence 469999999999999999999999999999999999975 21113899999999875421 24579999999888
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
++. ||+||+.+.....+..... . +.+ ..++.+++.+||.+...+.+
T Consensus 98 ~~~-tv~~ni~~~~~~~~~~~~~--------~----------~~~--------------~~~~~~l~~~~l~~~~~~~~- 143 (251)
T PRK14244 98 FPK-SIYDNVAYGPKLHGLAKNK--------K----------KLD--------------EIVEKSLTSVGLWEELGDRL- 143 (251)
T ss_pred ccC-CHHHHHHHHHHhcCCCCCH--------H----------HHH--------------HHHHHHHHHcCCCchhhhHh-
Confidence 875 9999998753221110000 0 000 01345678888865222222
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
+..++.|||||||||+||++|+.+|++++|||||+|||..++..+.+.|+++.+ ++|+|++.|++. ++.+++|++++
T Consensus 144 ~~~~~~LS~Gq~qrv~laral~~~p~llllDEPt~~LD~~~~~~l~~~l~~~~~--~~tiiiisH~~~-~~~~~~d~i~~ 220 (251)
T PRK14244 144 KDSAFELSGGQQQRLCIARAIAVKPTMLLMDEPCSALDPVATNVIENLIQELKK--NFTIIVVTHSMK-QAKKVSDRVAF 220 (251)
T ss_pred hcChhhCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCHH-HHHhhcCEEEE
Confidence 123456999999999999999999999999999999999999999999999853 688888887754 67789999999
Q ss_pred ecCCeEEEecChhHHH
Q 045902 419 LSEGEIVYQGPREYVL 434 (1472)
Q Consensus 419 L~~G~iv~~G~~~~~~ 434 (1472)
|++|++++.|+.+++.
T Consensus 221 l~~G~i~~~~~~~~~~ 236 (251)
T PRK14244 221 FQSGRIVEYNTTQEIF 236 (251)
T ss_pred EECCEEEEeCCHHHHh
Confidence 9999999999987763
No 489
>PRK10789 putative multidrug transporter membrane\ATP-binding components; Provisional
Probab=100.00 E-value=3.6e-32 Score=345.77 Aligned_cols=208 Identities=27% Similarity=0.365 Sum_probs=169.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
..+|+|+|++++||+.++|+||||||||||+++|+|.++|+ +|+|.+||+++.+... ++.++||+|++.+++ .
T Consensus 328 ~~~l~~i~~~i~~G~~~~ivG~sGsGKSTLl~ll~g~~~p~---~G~i~~~g~~~~~~~~~~~~~~i~~v~q~~~lf~-~ 403 (569)
T PRK10789 328 HPALENVNFTLKPGQMLGICGPTGSGKSTLLSLIQRHFDVS---EGDIRFHDIPLTKLQLDSWRSRLAVVSQTPFLFS-D 403 (569)
T ss_pred CccccCeeEEECCCCEEEEECCCCCCHHHHHHHHhcccCCC---CCEEEECCEEHhhCCHHHHHhheEEEccCCeecc-c
Confidence 35899999999999999999999999999999999999998 9999999999877543 467999999998886 5
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++||+.++... . .++++....+.+ +. +. ....|++..||.+|+ .+
T Consensus 404 ti~~Ni~~~~~~---~-------------------~~~~~~~~~~~~---~l------~~--~i~~lp~gl~t~~~~-~g 449 (569)
T PRK10789 404 TVANNIALGRPD---A-------------------TQQEIEHVARLA---SV------HD--DILRLPQGYDTEVGE-RG 449 (569)
T ss_pred cHHHHHhcCCCC---C-------------------CHHHHHHHHHHc---CC------HH--HHHhCcCcccceecC-CC
Confidence 999999875210 0 011111111111 11 11 123456677999985 56
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
..||||||||++||||++.+|++++|||||++||+.++..+.+.|+++. .++|+|++.|++ +..+.+|+|++|++|
T Consensus 450 ~~LSgGq~qRi~lARall~~~~illlDEpts~LD~~~~~~i~~~l~~~~--~~~tii~itH~~--~~~~~~d~i~~l~~G 525 (569)
T PRK10789 450 VMLSGGQKQRISIARALLLNAEILILDDALSAVDGRTEHQILHNLRQWG--EGRTVIISAHRL--SALTEASEILVMQHG 525 (569)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEECccccCCHHHHHHHHHHHHHHh--CCCEEEEEecch--hHHHcCCEEEEEeCC
Confidence 7899999999999999999999999999999999999999999999874 478999988887 455779999999999
Q ss_pred eEEEecChhHHHH
Q 045902 423 EIVYQGPREYVLD 435 (1472)
Q Consensus 423 ~iv~~G~~~~~~~ 435 (1472)
+++.+|+++++.+
T Consensus 526 ~i~~~g~~~~l~~ 538 (569)
T PRK10789 526 HIAQRGNHDQLAQ 538 (569)
T ss_pred EEEEecCHHHHHH
Confidence 9999999988754
No 490
>PRK10419 nikE nickel transporter ATP-binding protein NikE; Provisional
Probab=100.00 E-value=4.2e-32 Score=312.83 Aligned_cols=207 Identities=25% Similarity=0.326 Sum_probs=169.0
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC------CceEEEEcCCC--C
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP------QRTCAYISQHD--L 257 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~------~~~~~yv~Q~d--~ 257 (1472)
+.+|+|+|+.+++||+++|+||||||||||+++|+|..+++ +|+|.++|+++....+ ++.++|++|++ .
T Consensus 25 ~~il~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~l~Gl~~p~---sG~i~~~g~~~~~~~~~~~~~~~~~i~~v~q~~~~~ 101 (268)
T PRK10419 25 QTVLNNVSLSLKSGETVALLGRSGCGKSTLARLLVGLESPS---QGNVSWRGEPLAKLNRAQRKAFRRDIQMVFQDSISA 101 (268)
T ss_pred eeeEeceeEEEcCCCEEEEECCCCCCHHHHHHHHhCCCCCC---CcEEEECCEeccccChhHHHHHHhcEEEEEcChhhc
Confidence 56999999999999999999999999999999999999887 9999999998765432 35799999997 4
Q ss_pred CCCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc-cccccc
Q 045902 258 HHGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD-ICADIM 336 (1472)
Q Consensus 258 ~~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~-~~~dt~ 336 (1472)
+.+..|+.|++.+...... .....+ .....+.+++.+|+. ...++.
T Consensus 102 ~~~~~t~~~~l~~~~~~~~---------~~~~~~------------------------~~~~~~~~l~~~gl~~~~~~~~ 148 (268)
T PRK10419 102 VNPRKTVREIIREPLRHLL---------SLDKAE------------------------RLARASEMLRAVDLDDSVLDKR 148 (268)
T ss_pred cCCCCCHHHHHHHHHHhhc---------cCCHHH------------------------HHHHHHHHHHHcCCChhHhhCC
Confidence 6678999999876421100 000000 001235678888986 456655
Q ss_pred ccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeE
Q 045902 337 VGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDI 416 (1472)
Q Consensus 337 vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~i 416 (1472)
++ .||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++++..+.|+|++.|++ .++.+++|++
T Consensus 149 ~~-----~LS~Ge~qrl~laral~~~p~lllLDEPt~~LD~~~~~~~~~~l~~~~~~~~~tiiivsH~~-~~i~~~~d~i 222 (268)
T PRK10419 149 PP-----QLSGGQLQRVCLARALAVEPKLLILDEAVSNLDLVLQAGVIRLLKKLQQQFGTACLFITHDL-RLVERFCQRV 222 (268)
T ss_pred Cc-----cCChHHHHHHHHHHHHhcCCCEEEEeCCCcccCHHHHHHHHHHHHHHHHHcCcEEEEEECCH-HHHHHhCCEE
Confidence 54 59999999999999999999999999999999999999999999998775578888887765 4677899999
Q ss_pred EEecCCeEEEecChhHHH
Q 045902 417 ILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 417 ilL~~G~iv~~G~~~~~~ 434 (1472)
++|++|++++.|+.+++.
T Consensus 223 ~~l~~G~i~~~g~~~~~~ 240 (268)
T PRK10419 223 MVMDNGQIVETQPVGDKL 240 (268)
T ss_pred EEEECCEEeeeCChhhcc
Confidence 999999999999987764
No 491
>TIGR02203 MsbA_lipidA lipid A export permease/ATP-binding protein MsbA. This family consists of a single polypeptide chain transporter in the ATP-binding cassette (ABC) transporter family, MsbA, which exports lipid A. It may also act in multidrug resistance. Lipid A, a part of lipopolysaccharide, is found in the outer leaflet of the outer membrane of most Gram-negative bacteria. Members of this family are restricted to the Proteobacteria (although lipid A is more broadly distributed) and often are clustered with lipid A biosynthesis genes.
Probab=100.00 E-value=2.2e-32 Score=349.46 Aligned_cols=208 Identities=23% Similarity=0.385 Sum_probs=170.4
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+.+|+|+|+.++|||.++|+|+||||||||+++|+|.++|+ +|+|.+||.++++... ++.++||+|++.+|+ .
T Consensus 345 ~~il~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~~~---~G~I~i~g~~i~~~~~~~~~~~i~~v~Q~~~lf~-~ 420 (571)
T TIGR02203 345 RPALDSISLVIEPGETVALVGRSGSGKSTLVNLIPRFYEPD---SGQILLDGHDLADYTLASLRRQVALVSQDVVLFN-D 420 (571)
T ss_pred CccccCeeEEecCCCEEEEECCCCCCHHHHHHHHHhccCCC---CCeEEECCEeHHhcCHHHHHhhceEEccCccccc-c
Confidence 36899999999999999999999999999999999999998 8999999999887653 467999999998774 5
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccC
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMR 342 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~ 342 (1472)
|++|||.++... . .+++++.+..+.+. .+..++ .|++..||.+|+ .+
T Consensus 421 Ti~~Ni~~~~~~-~--------------------~~~~~i~~~l~~~~---------l~~~i~--~lp~gldt~i~~-~g 467 (571)
T TIGR02203 421 TIANNIAYGRTE-Q--------------------ADRAEIERALAAAY---------AQDFVD--KLPLGLDTPIGE-NG 467 (571)
T ss_pred cHHHHHhcCCCC-C--------------------CCHHHHHHHHHHcC---------hHHHHH--hCcCcccceecC-CC
Confidence 999999875210 0 01112222222211 122222 355667999985 47
Q ss_pred CCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCC
Q 045902 343 RGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEG 422 (1472)
Q Consensus 343 ~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G 422 (1472)
+.||||||||++||||++.+|++++||||||+||..++..|.+.|++.. .++|+|+..|++ +..+.+|+|++|++|
T Consensus 468 ~~LSgGqrQRiaLARall~~~~illLDEpts~LD~~~~~~i~~~L~~~~--~~~tiIiitH~~--~~~~~~D~ii~l~~g 543 (571)
T TIGR02203 468 VLLSGGQRQRLAIARALLKDAPILILDEATSALDNESERLVQAALERLM--QGRTTLVIAHRL--STIEKADRIVVMDDG 543 (571)
T ss_pred CcCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHHh--CCCEEEEEehhh--HHHHhCCEEEEEeCC
Confidence 7899999999999999999999999999999999999999999999875 468999888877 567889999999999
Q ss_pred eEEEecChhHHH
Q 045902 423 EIVYQGPREYVL 434 (1472)
Q Consensus 423 ~iv~~G~~~~~~ 434 (1472)
+++..|+++++.
T Consensus 544 ~i~~~g~~~~l~ 555 (571)
T TIGR02203 544 RIVERGTHNELL 555 (571)
T ss_pred EEEeeCCHHHHH
Confidence 999999999875
No 492
>PRK14264 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=3.5e-32 Score=318.79 Aligned_cols=214 Identities=26% Similarity=0.344 Sum_probs=167.8
Q ss_pred EEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCC---CeeEEEEEEcC
Q 045902 877 SLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTG---GYIEGSISISG 953 (1472)
Q Consensus 877 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~---~~~~G~i~i~G 953 (1472)
.+.++|+++.+. ++.+|+|+|++|++||+++|+|||||||||||++|+|...+ .+.+|+|.++|
T Consensus 45 ~l~i~nl~~~~~-------------~~~iL~~is~~i~~Ge~~~IvG~nGsGKSTLl~~L~Gl~~~~~~~p~~G~I~i~g 111 (305)
T PRK14264 45 KLSVEDLDVYYG-------------DDHALKGVSMDIPEKSVTALIGPSGCGKSTFLRCLNRMNDRIKAARIDGSVELDG 111 (305)
T ss_pred eEEEEEEEEEeC-------------CeeeeeeeEEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECC
Confidence 577888876542 24699999999999999999999999999999999998642 13589999999
Q ss_pred ccCCh-----hcccceeEEeccCCCCCCCCCHHHHHHHHHHcC-------------CCc----hHHHHHHHHHccccccc
Q 045902 954 YPKKQ-----ETFARISGYCEQNDIHSPNVTIYESLLYSAWLR-------------LPK----DMFVEEVMELVEMKALR 1011 (1472)
Q Consensus 954 ~~~~~-----~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~-------------~~~----~~~~~~v~~~l~l~~~~ 1011 (1472)
.++.. ...++.++|++|++.+++ .||+||+.+....+ ... +..++++++.+++.+..
T Consensus 112 ~~i~~~~~~~~~~~~~i~~v~q~~~l~~-~tv~enl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 190 (305)
T PRK14264 112 QDIYQDGVNLVELRKRVGMVFQSPNPFP-KSIRENISYGPRKHGDINTGLLARLLGRDDKDAEDELVERSLRQAALWDEV 190 (305)
T ss_pred EEcccccccHHHHhhceEEEccCCcccc-ccHHHHHHhHHhhcccccccccccccccCchHHHHHHHHHHHHHcCCchhh
Confidence 87532 234567999999988777 59999998764321 111 12355666767663211
Q ss_pred ccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhC
Q 045902 1012 NSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFD 1091 (1472)
Q Consensus 1012 ~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D 1091 (1472)
+.... ..+..||||||||++||+||+.+|+||+|||||+|||+.++..+++.|+++++ +.|||+++|+++ .+.+.+|
T Consensus 191 ~~~~~-~~~~~LSgGq~qrv~LAraL~~~p~lLLLDEPtsgLD~~~~~~l~~~L~~~~~-~~tiiivtH~~~-~i~~~~d 267 (305)
T PRK14264 191 NDRLD-DNALGLSGGQQQRLCIARCLAVDPEVILMDEPASALDPIATSKIEDLIEELAE-EYTVVVVTHNMQ-QAARISD 267 (305)
T ss_pred hHHhc-CccccCCHHHHHHHHHHHHHhcCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc-CCEEEEEEcCHH-HHHHhcC
Confidence 11111 12457999999999999999999999999999999999999999999999976 489999999976 4678899
Q ss_pred eEE-EEecCcEEEEEcCC
Q 045902 1092 ELF-LMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1092 ~v~-~l~~gg~v~~~g~~ 1108 (1472)
+++ +|. +|+++..|+.
T Consensus 268 ~i~~~l~-~G~i~~~g~~ 284 (305)
T PRK14264 268 QTAVFLT-GGELVEYDDT 284 (305)
T ss_pred EEEEEec-CCEEEEeCCH
Confidence 975 566 5799998875
No 493
>PRK14262 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=5.2e-32 Score=309.45 Aligned_cols=211 Identities=22% Similarity=0.378 Sum_probs=163.7
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCeeCCCC-----CCCceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDK--SLRVSGRVTYCGHELTEF-----VPQRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 258 (1472)
+.+|+|+|+++++||+++|+|||||||||||++|+|.+++ ....+|+|.++|.++... ..++.++|++|++.+
T Consensus 16 ~~~l~~i~~~i~~Ge~~~i~G~nGsGKSTLl~~i~Gl~~~~~~~~~~G~i~i~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 95 (250)
T PRK14262 16 KKAVKNVTMKIFKNQITAIIGPSGCGKTTLLRSINRMNDHIPGFRVEGKIYFKGQDIYDPQLDVTEYRKKVGMVFQKPTP 95 (250)
T ss_pred ceeEeeeeEeecCCCEEEEECCCCCCHHHHHHHHhccccCCCCCCcceEEEECCEEcccchhhHHHhhhhEEEEecCCcc
Confidence 3589999999999999999999999999999999999863 111389999999987532 123579999999988
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCccccccccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVG 338 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg 338 (1472)
++ +||+||+.+.....+.... ...+ ..++..++.+|+....+.. .
T Consensus 96 ~~-~tv~e~l~~~~~~~~~~~~-------------------~~~~--------------~~~~~~l~~~~l~~~~~~~-~ 140 (250)
T PRK14262 96 FP-MSIYDNVAFGPRIHGVKSK-------------------HKLD--------------RIVEESLKKAALWDEVKSE-L 140 (250)
T ss_pred Cc-ccHHHHHHHHHHHcCCCcH-------------------HHHH--------------HHHHHHHHHcCCCchhHHH-H
Confidence 87 8999999876432111000 0000 0123456666664321111 1
Q ss_pred CccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEE
Q 045902 339 NEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIIL 418 (1472)
Q Consensus 339 ~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iil 418 (1472)
+.....||||||||++||+||+.+|++++|||||+|||..++..+.+.|+++++ ++|++++.|++. ++.+++|++++
T Consensus 141 ~~~~~~LS~Gq~qr~~la~al~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tili~sH~~~-~~~~~~d~i~~ 217 (250)
T PRK14262 141 NKPGTRLSGGQQQRLCIARALAVEPEVILLDEPTSALDPIATQRIEKLLEELSE--NYTIVIVTHNIG-QAIRIADYIAF 217 (250)
T ss_pred hCChhhcCHHHHHHHHHHHHHhCCCCEEEEeCCccccCHHHHHHHHHHHHHHhc--CcEEEEEeCCHH-HHHHhCCEEEE
Confidence 234456999999999999999999999999999999999999999999999864 578888877654 67789999999
Q ss_pred ecCCeEEEecChhHHH
Q 045902 419 LSEGEIVYQGPREYVL 434 (1472)
Q Consensus 419 L~~G~iv~~G~~~~~~ 434 (1472)
|++|+++..|+.+++.
T Consensus 218 l~~G~i~~~g~~~~~~ 233 (250)
T PRK14262 218 MYRGELIEYGPTREIV 233 (250)
T ss_pred EECCEEEEecCHHHHH
Confidence 9999999999988764
No 494
>PRK13657 cyclic beta-1,2-glucan ABC transporter; Provisional
Probab=100.00 E-value=3.3e-32 Score=348.09 Aligned_cols=207 Identities=23% Similarity=0.339 Sum_probs=170.3
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEMT 263 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~lT 263 (1472)
++|+|+|+.++||+.++|+|+||||||||+|+|+|+++|+ +|+|.+||.++++... ++.++||+|++.+|+ .|
T Consensus 349 ~iL~~inl~i~~G~~v~IvG~sGsGKSTLl~lL~gl~~p~---~G~I~i~g~~i~~~~~~~~r~~i~~v~Q~~~lf~-~T 424 (588)
T PRK13657 349 QGVEDVSFEAKPGQTVAIVGPTGAGKSTLINLLQRVFDPQ---SGRILIDGTDIRTVTRASLRRNIAVVFQDAGLFN-RS 424 (588)
T ss_pred ceecceeEEECCCCEEEEECCCCCCHHHHHHHHhcCcCCC---CCEEEECCEEhhhCCHHHHHhheEEEecCccccc-cc
Confidence 5899999999999999999999999999999999999997 9999999999987653 468999999998885 69
Q ss_pred HHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcccccccccCccCC
Q 045902 264 VRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDICADIMVGNEMRR 343 (1472)
Q Consensus 264 V~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~~~dt~vg~~~~~ 343 (1472)
++|||.++... . +++++....+.+.+ +..++ .+++..||.+|+ .+.
T Consensus 425 i~~Ni~~~~~~--~--------------------~d~~i~~al~~~~l---------~~~i~--~lp~gldt~i~~-~g~ 470 (588)
T PRK13657 425 IEDNIRVGRPD--A--------------------TDEEMRAAAERAQA---------HDFIE--RKPDGYDTVVGE-RGR 470 (588)
T ss_pred HHHHHhcCCCC--C--------------------CHHHHHHHHHHhCH---------HHHHH--hCcccccchhcC-CCC
Confidence 99999875210 0 11122222222211 12222 245667899885 577
Q ss_pred CCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEecCCe
Q 045902 344 GISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLSEGE 423 (1472)
Q Consensus 344 gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~~G~ 423 (1472)
.||||||||++|||||+.+|++++||||||+||+.++..+.+.|+++. .++|+|++.|++ +..+.+|+|++|++|+
T Consensus 471 ~LSgGq~QRialARall~~~~iliLDEpts~LD~~t~~~i~~~l~~~~--~~~tvIiitHr~--~~~~~~D~ii~l~~G~ 546 (588)
T PRK13657 471 QLSGGERQRLAIARALLKDPPILILDEATSALDVETEAKVKAALDELM--KGRTTFIIAHRL--STVRNADRILVFDNGR 546 (588)
T ss_pred CCCHHHHHHHHHHHHHhcCCCEEEEeCCccCCCHHHHHHHHHHHHHHh--cCCEEEEEEecH--HHHHhCCEEEEEECCE
Confidence 799999999999999999999999999999999999999999999874 368999988887 4668899999999999
Q ss_pred EEEecChhHHHH
Q 045902 424 IVYQGPREYVLD 435 (1472)
Q Consensus 424 iv~~G~~~~~~~ 435 (1472)
++..|+++++.+
T Consensus 547 i~~~g~~~~l~~ 558 (588)
T PRK13657 547 VVESGSFDELVA 558 (588)
T ss_pred EEEeCCHHHHHH
Confidence 999999988853
No 495
>cd03217 ABC_FeS_Assembly ABC-type transport system involved in Fe-S cluster assembly, ATPase component. Biosynthesis of iron-sulfur clusters (Fe-S) depends on multiprotein systems. The SUF system of E. coli and Erwinia chrysanthemi is important for Fe-S biogenesis under stressful conditions. The SUF system is made of six proteins: SufC is an atypical cytoplasmic ABC-ATPase, which forms a complex with SufB and SufD; SufA plays the role of a scaffold protein for assembly of iron-sulfur clusters and delivery to target proteins; SufS is a cysteine desulfurase which mobilizes the sulfur atom from cysteine and provides it to the cluster; SufE has no associated function yet.
Probab=100.00 E-value=3e-32 Score=300.51 Aligned_cols=172 Identities=25% Similarity=0.333 Sum_probs=146.3
Q ss_pred ceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCccCCh---hcc-cceeEEeccCCCCCCCC
Q 045902 903 LQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYPKKQ---ETF-ARISGYCEQNDIHSPNV 978 (1472)
Q Consensus 903 ~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~~~~---~~~-~~~~gyv~Q~~~~~~~l 978 (1472)
+.+|+|+|+++++||+++|+||||||||||+++|+|.....+.+|+|.++|.+... ... ++.++|++|++.+++..
T Consensus 13 ~~~l~~is~~i~~Ge~~~i~G~nGsGKStLl~~l~G~~~~~p~~G~i~~~g~~~~~~~~~~~~~~~i~~v~q~~~~~~~~ 92 (200)
T cd03217 13 KEILKGVNLTIKKGEVHALMGPNGSGKSTLAKTIMGHPKYEVTEGEILFKGEDITDLPPEERARLGIFLAFQYPPEIPGV 92 (200)
T ss_pred EEeeeccceEECCCcEEEEECCCCCCHHHHHHHHhCCCcCCCCccEEEECCEECCcCCHHHHhhCcEEEeecChhhccCc
Confidence 46999999999999999999999999999999999984111458999999987643 122 34589999999888888
Q ss_pred CHHHHHHHHHHcCCCchHHHHHHHHHcccccccccccCCCCCCCCCHHHHHHHHHHHHHhhCCCCccccCCCCCCCHHHH
Q 045902 979 TIYESLLYSAWLRLPKDMFVEEVMELVEMKALRNSLVGLPGVDGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAA 1058 (1472)
Q Consensus 979 Tv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~~~~~~~~~~~~LSgGqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~ 1058 (1472)
|+++++. .. ...||||||||++|||+|+.+|++|+|||||+|||+.++
T Consensus 93 ~~~~~l~---------------------------~~-----~~~LS~G~~qrv~laral~~~p~illlDEPt~~LD~~~~ 140 (200)
T cd03217 93 KNADFLR---------------------------YV-----NEGFSGGEKKRNEILQLLLLEPDLAILDEPDSGLDIDAL 140 (200)
T ss_pred cHHHHHh---------------------------hc-----cccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHH
Confidence 8887760 00 136999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHhhCCCEEEEEecCccHHHHH-hhCeEEEEecCcEEEEEcCC
Q 045902 1059 AIVMRTVRNTVDTGRTVVCTIHQPSIDIFE-AFDELFLMKRGGHVIYAGPL 1108 (1472)
Q Consensus 1059 ~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~-~~D~v~~l~~gg~v~~~g~~ 1108 (1472)
..+.+.|++++++|+|||+++|+++ .+.+ .+|++++|++ |+++..|+.
T Consensus 141 ~~l~~~L~~~~~~~~tiii~sh~~~-~~~~~~~d~i~~l~~-G~i~~~~~~ 189 (200)
T cd03217 141 RLVAEVINKLREEGKSVLIITHYQR-LLDYIKPDRVHVLYD-GRIVKSGDK 189 (200)
T ss_pred HHHHHHHHHHHHCCCEEEEEecCHH-HHHHhhCCEEEEEEC-CEEEEEccH
Confidence 9999999999877899999999976 3444 6999999985 788888853
No 496
>TIGR03375 type_I_sec_LssB type I secretion system ATPase, LssB family. Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. This model is related to models TIGR01842 and TIGR01846, and to bacteriocin ABC transporters that cleave their substrates during export.
Probab=100.00 E-value=1.2e-32 Score=358.51 Aligned_cols=212 Identities=27% Similarity=0.430 Sum_probs=176.8
Q ss_pred eEEEEeceeeEEeccchhhccccccccceeeccceeEEeCCeEEEEEcCCCCChhHHHhhhcCCCCCCeeEEEEEEcCcc
Q 045902 876 LSLAFDHVNYFVDMPAEMKSQGIEENRLQLLQDVSGAFRPGVLTALVGVSGAGKTTLMDVLAGRKTGGYIEGSISISGYP 955 (1472)
Q Consensus 876 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iL~~vs~~i~~Ge~~al~G~nGaGKTTLl~~L~g~~~~~~~~G~i~i~G~~ 955 (1472)
..+.++|+++.++. +++.+|+|+|++|+|||.+||+|+||||||||+++|+|..++ .+|+|.+||.+
T Consensus 462 ~~I~~~~vsf~Y~~-----------~~~~vL~~i~l~i~~G~~iaIvG~sGsGKSTLlklL~gl~~p--~~G~I~idg~~ 528 (694)
T TIGR03375 462 GEIEFRNVSFAYPG-----------QETPALDNVSLTIRPGEKVAIIGRIGSGKSTLLKLLLGLYQP--TEGSVLLDGVD 528 (694)
T ss_pred ceEEEEEEEEEeCC-----------CCccceeeeeEEECCCCEEEEECCCCCCHHHHHHHHhcCCCC--CCceEEECCEE
Confidence 35889999988731 234699999999999999999999999999999999999874 58999999998
Q ss_pred CCh---hcccceeEEeccCCCCCCCCCHHHHHHHHHHcCCCchHHHHHHHHHccccccc-------ccccCCCCCCCCCH
Q 045902 956 KKQ---ETFARISGYCEQNDIHSPNVTIYESLLYSAWLRLPKDMFVEEVMELVEMKALR-------NSLVGLPGVDGLST 1025 (1472)
Q Consensus 956 ~~~---~~~~~~~gyv~Q~~~~~~~lTv~e~l~~~~~l~~~~~~~~~~v~~~l~l~~~~-------~~~~~~~~~~~LSg 1025 (1472)
+.+ ..+++.++||+|++.+++ .|++||+.+... ...++.+.++++..++.+.. |+.+|.. ..+|||
T Consensus 529 l~~~~~~~lr~~i~~v~Q~~~lf~-~TI~eNi~~~~~--~~~~~~i~~a~~~~~l~~~i~~lp~gl~T~i~e~-G~~LSg 604 (694)
T TIGR03375 529 IRQIDPADLRRNIGYVPQDPRLFY-GTLRDNIALGAP--YADDEEILRAAELAGVTEFVRRHPDGLDMQIGER-GRSLSG 604 (694)
T ss_pred hhhCCHHHHHhccEEECCChhhhh-hhHHHHHhCCCC--CCCHHHHHHHHHHcChHHHHHhCcccccceecCC-CCCCCH
Confidence 643 567889999999998886 499999986421 12345566667776665432 4445543 357999
Q ss_pred HHHHHHHHHHHHhhCCCCccccCCCCCCCHHHHHHHHHHHHHHhhCCCEEEEEecCccHHHHHhhCeEEEEecCcEEEEE
Q 045902 1026 EQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELFLMKRGGHVIYA 1105 (1472)
Q Consensus 1026 GqrqRl~iA~aL~~~p~il~LDEPTsgLD~~~~~~i~~~l~~l~~~g~tvi~t~H~~~~~~~~~~D~v~~l~~gg~v~~~ 1105 (1472)
|||||++|||||+++|+||+||||||+||+.+++.+++.|+++. +++|+|+++|+++ ..+.+|++++|++ |+++..
T Consensus 605 GQrQRlalARall~~p~iliLDE~Ts~LD~~te~~i~~~l~~~~-~~~T~iiItHrl~--~~~~~D~iivl~~-G~i~e~ 680 (694)
T TIGR03375 605 GQRQAVALARALLRDPPILLLDEPTSAMDNRSEERFKDRLKRWL-AGKTLVLVTHRTS--LLDLVDRIIVMDN-GRIVAD 680 (694)
T ss_pred HHHHHHHHHHHHhcCCCEEEEeCCCCCCCHHHHHHHHHHHHHHh-CCCEEEEEecCHH--HHHhCCEEEEEeC-CEEEee
Confidence 99999999999999999999999999999999999999999986 4799999999975 5688999999985 799999
Q ss_pred cCC
Q 045902 1106 GPL 1108 (1472)
Q Consensus 1106 g~~ 1108 (1472)
|+.
T Consensus 681 G~~ 683 (694)
T TIGR03375 681 GPK 683 (694)
T ss_pred CCH
Confidence 974
No 497
>cd03249 ABC_MTABC3_MDL1_MDL2 MTABC3 (also known as ABCB6) is a mitochondrial ATP-binding cassette protein involved in iron homeostasis and one of four ABC transporters expressed in the mitochondrial inner membrane, the other three being MDL1(ABC7), MDL2, and ATM1. In fact, the yeast MDL1 (multidrug resistance-like protein 1) and MDL2 (multidrug resistance-like protein 2) transporters are also included in this CD. MDL1 is an ATP-dependent permease that acts as a high-copy suppressor of ATM1 and is thought to have a role in resistance to oxidative stress. Interestingly, subfamily B is more closely related to the carboxyl-terminal component of subfamily C than the two halves of ABCC molecules are with one another.
Probab=100.00 E-value=3.9e-32 Score=308.21 Aligned_cols=206 Identities=23% Similarity=0.337 Sum_probs=160.6
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCCCceeEEEEcCeeCCCCCC---CceEEEEcCCCCCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSLRVSGRVTYCGHELTEFVP---QRTCAYISQHDLHHGEM 262 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~~~~G~I~~~G~~~~~~~~---~~~~~yv~Q~d~~~~~l 262 (1472)
+++|+|+|+.+++||+++|+||||||||||+++|+|.++++ +|+|.++|.++..... ++.++|++|++.+++ .
T Consensus 16 ~~~l~~i~~~i~~Ge~~~l~G~nGsGKSTLl~~i~G~~~~~---~G~i~~~g~~~~~~~~~~~~~~i~~~~q~~~~~~-~ 91 (238)
T cd03249 16 VPILKGLSLTIPPGKTVALVGSSGCGKSTVVSLLERFYDPT---SGEILLDGVDIRDLNLRWLRSQIGLVSQEPVLFD-G 91 (238)
T ss_pred ccceeceEEEecCCCEEEEEeCCCCCHHHHHHHHhccCCCC---CCEEEECCEehhhcCHHHHHhhEEEECCchhhhh-h
Confidence 46899999999999999999999999999999999999887 8999999988754322 356999999987775 6
Q ss_pred CHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHh--CCcccccccccCc
Q 045902 263 TVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKIL--GLDICADIMVGNE 340 (1472)
Q Consensus 263 TV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~l--gL~~~~dt~vg~~ 340 (1472)
||+||+.+...... . + ++. ...+ . ......++.+ |++...+..
T Consensus 92 tv~e~l~~~~~~~~---~-~---~~~---------------~~~~---~------~~~~~~~~~l~~~~~~~~~~~---- 136 (238)
T cd03249 92 TIAENIRYGKPDAT---D-E---EVE---------------EAAK---K------ANIHDFIMSLPDGYDTLVGER---- 136 (238)
T ss_pred hHHHHhhccCCCCC---H-H---HHH---------------HHHH---H------cChHHHHHhhccccceeeccC----
Confidence 99999987532110 0 0 000 0000 0 0012223333 444444433
Q ss_pred cCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCeEEEec
Q 045902 341 MRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDDIILLS 420 (1472)
Q Consensus 341 ~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~iilL~ 420 (1472)
.+.|||||||||+||++|+.+|++++|||||+|||+.++..+.+.|+++. .++|+|++.|++. ++ +.+|++++|+
T Consensus 137 -~~~LS~G~~qrv~la~al~~~p~llllDEP~~gLD~~~~~~l~~~l~~~~--~g~~vi~~sh~~~-~~-~~~d~v~~l~ 211 (238)
T cd03249 137 -GSQLSGGQKQRIAIARALLRNPKILLLDEATSALDAESEKLVQEALDRAM--KGRTTIVIAHRLS-TI-RNADLIAVLQ 211 (238)
T ss_pred -CccCCHHHHHHHHHHHHHhcCCCEEEEeCccccCCHHHHHHHHHHHHHhc--CCCEEEEEeCCHH-HH-hhCCEEEEEE
Confidence 45699999999999999999999999999999999999999999999985 5788888887764 45 4899999999
Q ss_pred CCeEEEecChhHHHH
Q 045902 421 EGEIVYQGPREYVLD 435 (1472)
Q Consensus 421 ~G~iv~~G~~~~~~~ 435 (1472)
+|++++.|+.+++.+
T Consensus 212 ~G~i~~~~~~~~~~~ 226 (238)
T cd03249 212 NGQVVEQGTHDELMA 226 (238)
T ss_pred CCEEEEeCCHHHHhh
Confidence 999999999877654
No 498
>PRK14272 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8e-32 Score=308.30 Aligned_cols=208 Identities=24% Similarity=0.334 Sum_probs=162.9
Q ss_pred ceeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCeeCCCC-----CCCceEEEEcCCCCC
Q 045902 186 LEILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSL--RVSGRVTYCGHELTEF-----VPQRTCAYISQHDLH 258 (1472)
Q Consensus 186 ~~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~ 258 (1472)
+.+|+|+|+.+++||+++|+||||||||||+++|+|.++++. ..+|+|.++|+++... ..++.++|++|++.+
T Consensus 17 ~~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~ 96 (252)
T PRK14272 17 KQAVKNVNLDVQRGTVNALIGPSGCGKTTFLRAINRMHDLTPGARVTGRILLDGQDIYGPRVDPVAMRRRVGMVFQKPNP 96 (252)
T ss_pred EEeeccceEEEcCCCEEEEECCCCCCHHHHHHHHhccCCCCcCCCCceeEEECCEEcccCccCHHHhhceeEEEeccCcc
Confidence 369999999999999999999999999999999999987531 1379999999987532 113569999999999
Q ss_pred CCCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc----cccc
Q 045902 259 HGEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD----ICAD 334 (1472)
Q Consensus 259 ~~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~d 334 (1472)
++.+|+.||+.+.....+...+ ++..+ ..+.+++.+++. +..+
T Consensus 97 ~~~~t~~enl~~~~~~~~~~~~-------------------~~~~~--------------~~~~~l~~~~l~~~l~~~~~ 143 (252)
T PRK14272 97 FPTMSVFDNVVAGLKLAGIRDR-------------------DHLME--------------VAERSLRGAALWDEVKDRLK 143 (252)
T ss_pred CcCCCHHHHHHHHHHhcCCCCH-------------------HHHHH--------------HHHHHHHHcCcchhhhhhhc
Confidence 9999999999875432111000 00000 012233444432 2334
Q ss_pred ccccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccC
Q 045902 335 IMVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFD 414 (1472)
Q Consensus 335 t~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD 414 (1472)
+.+ +.||||||||++||++|+.+|++|+|||||+|||..++..+.+.|+++++ +.|+|++.|++. ++.+++|
T Consensus 144 ~~~-----~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~~-~~~~~~d 215 (252)
T PRK14272 144 TPA-----TGLSGGQQQRLCIARALAVEPEILLMDEPTSALDPASTARIEDLMTDLKK--VTTIIIVTHNMH-QAARVSD 215 (252)
T ss_pred CCc-----ccCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEeCCHH-HHHHhCC
Confidence 444 45999999999999999999999999999999999999999999999863 578888877654 6778999
Q ss_pred eEEEecCCeEEEecChhHHH
Q 045902 415 DIILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 415 ~iilL~~G~iv~~G~~~~~~ 434 (1472)
++++|++|++++.|+.+++.
T Consensus 216 ~i~~l~~G~i~~~~~~~~~~ 235 (252)
T PRK14272 216 TTSFFLVGDLVEHGPTDQLF 235 (252)
T ss_pred EEEEEECCEEEEeCCHHHHH
Confidence 99999999999999988764
No 499
>PRK14240 phosphate transporter ATP-binding protein; Provisional
Probab=100.00 E-value=7.4e-32 Score=308.17 Aligned_cols=206 Identities=23% Similarity=0.367 Sum_probs=161.7
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCC--CCCceeEEEEcCeeCCCC-----CCCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDK--SLRVSGRVTYCGHELTEF-----VPQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~--~~~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 259 (1472)
++|+|+|+++++||+++|+|||||||||||++|+|..++ ....+|+|.++|+++... ..++.++|++|++.++
T Consensus 17 ~~l~~vs~~i~~Ge~~~i~G~nGsGKSTLl~~i~G~~~~~~~~~~~G~i~~~g~~~~~~~~~~~~~~~~i~~~~q~~~~~ 96 (250)
T PRK14240 17 QALKKINLDIEENQVTALIGPSGCGKSTFLRTLNRMNDLIPSVKIEGEVLLDGQDIYKSDIDVNQLRKRVGMVFQQPNPF 96 (250)
T ss_pred eeeecceEEEcCCCEEEEECCCCCCHHHHHHHHhccccccCCCCCceEEEECCEEccccccchHHHhccEEEEecCCccC
Confidence 589999999999999999999999999999999998652 212389999999987531 1245799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCcc----cccc
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLDI----CADI 335 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~~----~~dt 335 (1472)
+ +||+||+.+.....+.... .+.+ ...+.+++.+++.+ ..++
T Consensus 97 ~-~t~~~ni~~~~~~~~~~~~-------------------~~~~--------------~~~~~~l~~~~l~~~l~~~~~~ 142 (250)
T PRK14240 97 P-MSIYDNVAYGPRTHGIKDK-------------------KKLD--------------EIVEKSLKGAALWDEVKDRLKK 142 (250)
T ss_pred c-ccHHHHHHHHHHhcCCCCH-------------------HHHH--------------HHHHHHHHHcCCchhhHHHHhc
Confidence 7 8999999886432221000 0000 01233455555532 2333
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
. ...|||||||||+|||+|+.+|++++|||||+|||+.++..+.+.|+++.+ +.|+|++.|++ .++.+++|+
T Consensus 143 ~-----~~~LS~G~~qrv~laral~~~p~llllDEP~~~LD~~~~~~l~~~l~~~~~--~~tiii~sH~~-~~~~~~~d~ 214 (250)
T PRK14240 143 S-----ALGLSGGQQQRLCIARALAVEPEVLLMDEPTSALDPISTLKIEELIQELKK--DYTIVIVTHNM-QQASRISDK 214 (250)
T ss_pred C-----CCCCCHHHHHHHHHHHHHhcCCCEEEEeCCCccCCHHHHHHHHHHHHHHhc--CCeEEEEEeCH-HHHHhhCCE
Confidence 3 445999999999999999999999999999999999999999999999853 67888887764 477889999
Q ss_pred EEEecCCeEEEecChhHHH
Q 045902 416 IILLSEGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~~G~iv~~G~~~~~~ 434 (1472)
+++|++|+++..|+.+++.
T Consensus 215 v~~l~~G~i~~~~~~~~~~ 233 (250)
T PRK14240 215 TAFFLNGEIVEFGDTVDLF 233 (250)
T ss_pred EEEEECCEEEEeCCHHHHH
Confidence 9999999999999987763
No 500
>PRK14265 phosphate ABC transporter ATP-binding protein; Provisional
Probab=100.00 E-value=8.1e-32 Score=311.25 Aligned_cols=204 Identities=22% Similarity=0.309 Sum_probs=159.2
Q ss_pred eeeeceeeEEeCCeEEEEEcCCCCcHHHHHHHHhCCCCCCC--CceeEEEEcCeeCCCC-----CCCceEEEEcCCCCCC
Q 045902 187 EILHDVSGIVKPSRMTLLLGPPGSGKTTLLQALSGKSDKSL--RVSGRVTYCGHELTEF-----VPQRTCAYISQHDLHH 259 (1472)
Q Consensus 187 ~iL~~vs~~i~~Ge~~~ilGp~GsGKSTLL~~L~G~~~~~~--~~~G~I~~~G~~~~~~-----~~~~~~~yv~Q~d~~~ 259 (1472)
.+|+|+|+.+++||+++|+|||||||||||++|+|.+++.. ..+|+|.++|+++... ..++.++|++|++.++
T Consensus 34 ~~l~~vs~~i~~Ge~~~IiG~nGsGKSTLl~~l~Gl~~~~~~~~~~G~i~~~g~~l~~~~~~~~~~~~~i~~v~q~~~l~ 113 (274)
T PRK14265 34 LALVDVHLKIPAKKIIAFIGPSGCGKSTLLRCFNRMNDLIPGAKVEGRLLYRDRNIYDSQINSVKLRRQVGMVFQRPNPF 113 (274)
T ss_pred EEEeeeeeEEcCCCEEEEECCCCCCHHHHHHHHhcccccccCCCcCceEEECCEecccccchhHHHhhcEEEEccCCccc
Confidence 58999999999999999999999999999999999975311 1379999999987431 1245799999998888
Q ss_pred CCCCHHHHHHHhhhccCCCchhHHHHHhhHHHHhcCCCCChhHHHHHHHHHhccccccccHHHHHHHhCCc----ccccc
Q 045902 260 GEMTVRETLDFSGRCLGVGTRFELLAELSRREKDAGIKPDPEIDAFMKATAMSGLKTSLGTDYVLKILGLD----ICADI 335 (1472)
Q Consensus 260 ~~lTV~E~l~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~lgL~----~~~dt 335 (1472)
+. ||.||+.+.....+... . .+. ..+..++.+|+. +..++
T Consensus 114 ~~-tv~~nl~~~~~~~~~~~------~---------------~~~--------------~~~~~l~~~~l~~~l~~~~~~ 157 (274)
T PRK14265 114 PK-SIYENIAFAPRANGYKG------N---------------LDE--------------LVEDSLRRAAIWEEVKDKLKE 157 (274)
T ss_pred cc-cHHHHHHhHHHhcCchH------H---------------HHH--------------HHHHHHHHcccchhhHHHhcC
Confidence 64 99999987533211000 0 000 012234444442 22333
Q ss_pred cccCccCCCCChHHHHHHHHHHHHhCCCcEeEEeCCCCCCCHHHHHHHHHHHHHHHHhCCcEEEEEEecCcchHHhccCe
Q 045902 336 MVGNEMRRGISGGQKKRVTTGEMLVGPAKALFMDEISTGLDSSTTFQIVRFMRQMVHITDVTMIISLLQPAPETYDLFDD 415 (1472)
Q Consensus 336 ~vg~~~~~gLSGGqrkRvsia~aL~~~p~illLDEptsgLDs~t~~~i~~~L~~l~~~~~~tvii~~~q~~~~~~~~fD~ 415 (1472)
.+..|||||||||+||+||+.+|++|||||||+|||..++..+.+.|+++++ +.|+|++.|++ .++.+++|+
T Consensus 158 -----~~~~LSgGq~qrv~LAraL~~~p~lllLDEPt~~LD~~~~~~l~~~L~~~~~--~~tiii~sH~~-~~~~~~~d~ 229 (274)
T PRK14265 158 -----KGTALSGGQQQRLCIARAIAMKPDVLLMDEPCSALDPISTRQVEELCLELKE--QYTIIMVTHNM-QQASRVADW 229 (274)
T ss_pred -----CcccCCHHHHHHHHHHHHHhhCCCEEEEeCCcccCCHHHHHHHHHHHHHHhc--CCEEEEEeCCH-HHHHHhCCE
Confidence 3456999999999999999999999999999999999999999999999864 57888877665 477889999
Q ss_pred EEEec---------CCeEEEecChhHHH
Q 045902 416 IILLS---------EGEIVYQGPREYVL 434 (1472)
Q Consensus 416 iilL~---------~G~iv~~G~~~~~~ 434 (1472)
+++|+ +|++++.|+.+++.
T Consensus 230 i~~l~~~~~~~~~~~G~~~~~g~~~~~~ 257 (274)
T PRK14265 230 TAFFNTEIDEYGKRRGKLVEFSPTEQMF 257 (274)
T ss_pred EEEEecccccccccCceEEEeCCHHHHH
Confidence 99997 89999999998874
Done!