Query 045906
Match_columns 125
No_of_seqs 145 out of 806
Neff 5.4
Searched_HMMs 29240
Date Mon Mar 25 11:34:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045906.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045906hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1pxz_A Major pollen allergen J 100.0 9.9E-33 3.4E-37 227.7 12.9 120 6-125 12-156 (346)
2 3vmv_A Pectate lyase; polysacc 100.0 9.4E-29 3.2E-33 203.0 8.8 101 18-125 3-126 (326)
3 3zsc_A Pectate trisaccharide-l 99.9 2.8E-28 9.6E-33 201.3 9.4 100 18-125 13-122 (340)
4 1idk_A Pectin lyase A; signal, 99.9 2.8E-28 9.7E-33 202.1 8.6 105 14-125 2-159 (359)
5 1pcl_A Pectate lyase E; lyase 99.9 6.2E-27 2.1E-31 193.8 11.2 105 14-125 3-139 (355)
6 1pe9_A Pectate lyase A; parall 99.9 6.9E-27 2.4E-31 194.1 10.2 100 19-125 14-149 (361)
7 1vbl_A Pectate lyase 47; PL 47 99.9 1.2E-26 4.2E-31 195.6 11.0 109 9-125 2-195 (416)
8 2o04_A Pectate lyase, PL; hexa 99.9 1.5E-26 5.1E-31 194.1 10.7 108 9-125 2-189 (399)
9 1qcx_A Pectin lyase B; beta-he 99.9 9.4E-27 3.2E-31 192.9 8.8 105 14-125 2-159 (359)
10 2qy1_A Pectate lyase II; GAG l 99.9 2.4E-26 8.2E-31 188.3 5.2 99 18-125 1-119 (330)
11 1air_A Pectate lyase C, PELC; 99.7 8.8E-19 3E-23 144.9 6.0 97 18-125 3-136 (353)
12 1xg2_A Pectinesterase 1; prote 94.6 0.19 6.6E-06 40.5 9.0 65 47-115 17-103 (317)
13 1gq8_A Pectinesterase; hydrola 94.5 0.3 1E-05 39.4 9.8 65 47-115 21-107 (319)
14 1ru4_A Pectate lyase, PEL9A; p 93.2 1.7 5.7E-05 35.9 12.3 86 28-115 10-128 (400)
15 3uw0_A Pectinesterase; right-h 91.8 0.58 2E-05 38.5 7.7 66 46-115 45-135 (364)
16 2nsp_A Pectinesterase A; micha 91.6 0.77 2.6E-05 37.3 8.2 67 45-115 18-109 (342)
17 1dbg_A Chondroitinase B; beta 89.7 0.86 2.9E-05 39.0 7.0 73 35-115 26-107 (506)
18 3gq8_A Preneck appendage prote 79.6 12 0.00039 33.0 9.4 20 96-115 137-156 (609)
19 2iq7_A Endopolygalacturonase; 75.5 3.6 0.00012 32.8 4.7 29 96-124 126-159 (339)
20 1bhe_A PEHA, polygalacturonase 74.9 4.6 0.00016 32.5 5.2 29 93-125 201-229 (376)
21 1ia5_A Polygalacturonase; glyc 74.5 3.9 0.00013 32.7 4.7 29 96-124 130-163 (339)
22 3gqn_A Preneck appendage prote 74.2 18 0.00061 32.7 9.2 20 96-115 137-156 (772)
23 3grh_A YBHC, acyl-COA thioeste 73.7 21 0.00073 29.9 9.1 40 47-88 91-138 (422)
24 2inu_A Insulin fructotransfera 73.5 5.5 0.00019 33.4 5.5 56 58-114 58-148 (410)
25 2pyg_A Poly(beta-D-mannuronate 73.4 20 0.00068 28.0 8.5 39 48-87 22-70 (377)
26 1nhc_A Polygalacturonase I; be 72.9 3.6 0.00012 32.8 4.1 28 96-124 126-158 (336)
27 3jur_A EXO-poly-alpha-D-galact 72.8 4 0.00014 34.1 4.5 28 94-125 239-266 (448)
28 1ia5_A Polygalacturonase; glyc 71.4 3.1 0.00011 33.2 3.4 29 93-125 158-186 (339)
29 1rmg_A Rgase A, rhamnogalactur 71.1 3.5 0.00012 34.0 3.8 30 95-124 152-181 (422)
30 1hg8_A Endopolygalacturonase; 70.2 4.1 0.00014 32.7 3.9 29 93-125 166-194 (349)
31 2iq7_A Endopolygalacturonase; 70.1 3.5 0.00012 32.9 3.4 29 93-125 154-182 (339)
32 1nhc_A Polygalacturonase I; be 69.6 3.3 0.00011 33.0 3.2 29 93-125 153-181 (336)
33 1czf_A Polygalacturonase II; b 67.5 3.9 0.00013 33.1 3.2 29 95-124 151-184 (362)
34 3eqn_A Glucan 1,3-beta-glucosi 66.0 18 0.00063 32.6 7.5 66 46-113 418-499 (758)
35 1h80_A IOTA-carrageenase; hydr 65.7 5.9 0.0002 33.4 4.1 37 78-114 109-153 (464)
36 2uvf_A Exopolygalacturonase; G 64.1 5.6 0.00019 34.3 3.7 26 95-124 382-407 (608)
37 1rmg_A Rgase A, rhamnogalactur 61.8 5.5 0.00019 32.8 3.1 28 93-125 176-203 (422)
38 1k5c_A Endopolygalacturonase; 61.6 6 0.0002 31.6 3.3 26 95-125 154-179 (335)
39 1bhe_A PEHA, polygalacturonase 61.1 8.6 0.00029 30.8 4.1 29 96-124 177-206 (376)
40 1hg8_A Endopolygalacturonase; 55.9 8.9 0.00031 30.7 3.4 29 96-124 130-171 (349)
41 2uvf_A Exopolygalacturonase; G 55.9 7.2 0.00025 33.6 3.0 30 95-124 356-385 (608)
42 1pxz_A Major pollen allergen J 54.2 35 0.0012 27.4 6.7 23 93-115 150-172 (346)
43 1czf_A Polygalacturonase II; b 53.7 11 0.00039 30.3 3.7 21 96-116 129-149 (362)
44 3jur_A EXO-poly-alpha-D-galact 48.0 11 0.00037 31.4 2.8 27 97-124 217-243 (448)
45 1k5c_A Endopolygalacturonase; 47.9 11 0.00038 30.0 2.7 29 96-124 122-157 (335)
46 1ep7_A Thioredoxin CH1, H-type 39.5 14 0.00047 22.9 1.7 27 31-62 1-31 (112)
47 1ti3_A Thioredoxin H, PTTRXH1; 38.0 14 0.00048 22.8 1.5 29 29-62 1-33 (113)
48 1ogo_X Dextranase; hydrolase, 33.9 56 0.0019 28.2 5.1 29 96-124 350-380 (574)
49 1x0c_A Isopullulanase; glycosi 27.4 26 0.00088 30.0 1.9 10 104-113 322-331 (549)
50 2x3h_A K5 lyase, K5A lyase; ba 26.5 29 0.001 29.0 2.0 39 78-116 142-180 (542)
51 1qcx_A Pectin lyase B; beta-he 26.3 69 0.0024 25.8 4.2 22 93-114 153-174 (359)
52 1ogo_X Dextranase; hydrolase, 26.2 27 0.00093 30.2 1.8 27 93-125 375-401 (574)
53 3eqn_A Glucan 1,3-beta-glucosi 25.7 2E+02 0.0068 25.9 7.3 40 47-87 68-119 (758)
54 2x6w_A Tail spike protein; vir 24.9 41 0.0014 29.5 2.7 15 96-110 201-218 (600)
55 3zsc_A Pectate trisaccharide-l 21.4 87 0.003 25.3 3.8 23 93-115 116-138 (340)
56 2j23_A Thioredoxin; immune pro 21.4 45 0.0015 21.2 1.8 28 31-63 14-41 (121)
57 2vm1_A Thioredoxin, thioredoxi 21.0 38 0.0013 20.8 1.3 28 31-63 5-36 (118)
No 1
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=100.00 E-value=9.9e-33 Score=227.66 Aligned_cols=120 Identities=38% Similarity=0.604 Sum_probs=110.7
Q ss_pred cccccccccccCCccccccCCcCCCCcceEEEcCCCCC----CCchHHHhhhcCCCeEEEEeeeeEEEeCeeeeecCCeE
Q 045906 6 AHVDCSLRALAGQAEGFGRLAIGGLHGPLYHVTTLADD----GPGSLREGCRMKEPLWIVFEVSGTIHLRSHLSVSSYKT 81 (125)
Q Consensus 6 ~~~~~~~~~~~~~~~Gfg~~ttGG~gg~~~~Vtt~~d~----g~GsLr~a~~~~~p~iIvf~vsGtI~l~~~l~V~snkT 81 (125)
..+..+++++++|++|||++||||+||++|+||+++|+ +|||||+|+.+++|+||+|+++|+|+++++|.|.||||
T Consensus 12 ~~w~~~~~~~~~~a~Gfg~~ttGG~gG~v~~VT~~~d~~~~~~~GsLr~av~~~~P~~Ivf~~~g~I~l~~~l~V~sn~T 91 (346)
T 1pxz_A 12 SNWDQNRMKLADCAVGFGSSTMGGKGGDFYTVTSTDDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLKMPLYVAGHKT 91 (346)
T ss_dssp CCTTTCGGGGGGCCCGGGTTCCTTTTSEEEEECCCCCCTTSCCTTSHHHHHHCSSCEEEEESSCEEECCSSCEECCSSEE
T ss_pred cchhhhhhhcccCCccccCCCcCCCCccEEEECChHHcccccCcchhHHHhccCCCeEEEEcCCcEEecCccEEecCCeE
Confidence 34567888888999999999999999999999999998 89999999999999999999999999999999999999
Q ss_pred EEeecCceEEec--CcEEEeccCcEEEeeeEEecCC-------------------CCCCCeeeeC
Q 045906 82 IDGRGQRVKLTG--KGLRLKECEHVIICNLEFECGK-------------------GPDADAIQIK 125 (125)
Q Consensus 82 I~G~g~~~~i~G--~gl~i~~~~NVIIrNL~i~~~~-------------------~~~~DaI~I~ 125 (125)
|+|+|+++.|.| .+|++++++|||||||+|+++. .+++|+|+|+
T Consensus 92 I~G~ga~~~i~G~G~gi~i~~a~NVIIrnl~i~~~~~~~~~~I~~~~~~~~g~~~~~~~DaI~i~ 156 (346)
T 1pxz_A 92 IDGRGADVHLGNGGPCLFMRKVSHVILHSLHIHGCNTSVLGDVLVSESIGVEPVHAQDGDAITMR 156 (346)
T ss_dssp EECTTSCEEEETTSCCEEEESCEEEEEESCEEECCCCCCSEEEEEETTTEEEEECCCCCCSEEEE
T ss_pred EEccCCceEEeCCcceEEEEccCCEEEEeeEEEeeccCCCceEEeccCcccccccCCCCCEEEEe
Confidence 999999999997 5899999999999999999763 2578999873
No 2
>3vmv_A Pectate lyase; polysaccharide lyase family 1, beta-helix, pectolytic, polygalacturonate; 1.54A {Bacillus} PDB: 3vmw_A*
Probab=99.95 E-value=9.4e-29 Score=203.02 Aligned_cols=101 Identities=28% Similarity=0.400 Sum_probs=96.1
Q ss_pred Ccccccc---CCcCCCCcceEEEcCCCCCCCchHHHhhh-------cCCCeEEEEeeeeEEEeC----eeeeec------
Q 045906 18 QAEGFGR---LAIGGLHGPLYHVTTLADDGPGSLREGCR-------MKEPLWIVFEVSGTIHLR----SHLSVS------ 77 (125)
Q Consensus 18 ~~~Gfg~---~ttGG~gg~~~~Vtt~~d~g~GsLr~a~~-------~~~p~iIvf~vsGtI~l~----~~l~V~------ 77 (125)
+++|||+ +||||+||++|+|||++| ||+||+ +++||+|+ |+|+|++. ++|+|.
T Consensus 3 ~~~Gfa~~nggTtGG~gG~vv~Vttl~d-----L~~Al~~~~~~~~~~~p~iI~--V~G~I~l~~~~~~~i~v~~~~~~~ 75 (326)
T 3vmv_A 3 GPQGYASMNGGTTGGAGGRVEYASTGAQ-----IQQLIDNRSRSNNPDEPLTIY--VNGTITQGNSPQSLIDVKNHRGKA 75 (326)
T ss_dssp CCSGGGGSTTCCCTTTTSEEEEESSHHH-----HHHHHHHHHHSSCTTSCEEEE--ECSEEESTTCSSSSEEESCTTCTT
T ss_pred CCceeeecCCCCccCCCCeEEEECCHHH-----HHHHHhhcccccCCCCCEEEE--EeeEEecCCCCCceEEEecccccc
Confidence 4899999 799999999999999999 999999 89999998 99999998 889998
Q ss_pred ---CCeEEEeecCceEEecCcEEEeccCcEEEeeeEEecCCCCCCCeeeeC
Q 045906 78 ---SYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFECGKGPDADAIQIK 125 (125)
Q Consensus 78 ---snkTI~G~g~~~~i~G~gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I~ 125 (125)
|||||+|+|.+++|.|.+|+|++++|||||||+|+++..+++|+|+|.
T Consensus 76 ~~~sn~TI~G~g~~~~i~G~gl~i~~a~NVIIrNl~i~~~~~~~~DaI~i~ 126 (326)
T 3vmv_A 76 HEIKNISIIGVGTNGEFDGIGIRLSNAHNIIIQNVSIHHVREGEGTAIEVT 126 (326)
T ss_dssp SCEEEEEEEECTTCCEEESCCEEEESEEEEEEESCEEECCCSTTSCSEEEE
T ss_pred cCCCCeEEEecCCCeEEeCcEEEEEecceEEEECeEEEcCCCCCCCeEEEe
Confidence 999999999999999999999999999999999999988889999973
No 3
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=99.95 E-value=2.8e-28 Score=201.28 Aligned_cols=100 Identities=34% Similarity=0.457 Sum_probs=92.1
Q ss_pred CccccccCCcCCCCcceEEEcCCCCCCCchHHHhhhcCCCeEEEEeeeeEEEeC--eeeeecCCeEEEeecCceEEecCc
Q 045906 18 QAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLR--SHLSVSSYKTIDGRGQRVKLTGKG 95 (125)
Q Consensus 18 ~~~Gfg~~ttGG~gg~~~~Vtt~~d~g~GsLr~a~~~~~p~iIvf~vsGtI~l~--~~l~V~snkTI~G~g~~~~i~G~g 95 (125)
.|||||++||||++|++|+|||++| ||+|+++++||||+ ++|+|+++ ++|.|.|||||+|+++. +|.|.+
T Consensus 13 ~AeG~g~~ttGG~gG~v~~VTtl~d-----Lr~al~~~~PriIv--v~G~I~~~~~~~l~v~snkTI~G~ga~-~I~G~G 84 (340)
T 3zsc_A 13 PTADLPEGTVGGLGGEIVFVRTAEE-----LEKYTTAEGKYVIV--VDGTIVFEPKREIKVLSDKTIVGINDA-KIVGGG 84 (340)
T ss_dssp CCSSCTTSCCTTTTSEEEEECSHHH-----HHHHHTSSSCEEEE--EEEEEEEEEEEEEEECSSEEEEEEEEE-EEEEEE
T ss_pred cccccCCCCccCCCceEEEeCCHHH-----HHHHHhCCCCEEEE--ECcEEEeCCcceEEecCCCEEEeccCc-EEecCc
Confidence 4778888999999999999999999 99999999999999 78999998 89999999999999887 999999
Q ss_pred EEEeccCcEEEeeeEEecCCC---C-----CCCeeeeC
Q 045906 96 LRLKECEHVIICNLEFECGKG---P-----DADAIQIK 125 (125)
Q Consensus 96 l~i~~~~NVIIrNL~i~~~~~---~-----~~DaI~I~ 125 (125)
|+|++++|||||||+||++.. + ++|+|+|+
T Consensus 85 i~I~~a~NVIIrnl~i~~~~~~~~~~~~~~~~DaI~i~ 122 (340)
T 3zsc_A 85 LVIKDAQNVIIRNIHFEGFYMEDDPRGKKYDFDYINVE 122 (340)
T ss_dssp EEEESCEEEEEESCEEECCCCTTCTTSCSSCCCSEEEE
T ss_pred eEEEcCceEEEeCeEEECCccccCccCCcCCCCeEEEe
Confidence 999999999999999998742 2 78999873
No 4
>1idk_A Pectin lyase A; signal, glycoprotein, multigene family; 1.93A {Aspergillus niger} SCOP: b.80.1.2 PDB: 1idj_A
Probab=99.95 E-value=2.8e-28 Score=202.09 Aligned_cols=105 Identities=29% Similarity=0.369 Sum_probs=96.0
Q ss_pred cccCCccccccCCcCCCCcceEEEcCCCCCCCchHHHhhhcCCCeEEEEeeeeEEEeC----------------------
Q 045906 14 ALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLR---------------------- 71 (125)
Q Consensus 14 ~~~~~~~Gfg~~ttGG~gg~~~~Vtt~~d~g~GsLr~a~~~~~p~iIvf~vsGtI~l~---------------------- 71 (125)
++.++++|||++||||++|++|+|||++| ||+||++++||||+ ++|+|+++
T Consensus 2 ~~~~~a~Gfa~~tTGG~~g~~~~Vtt~~d-----L~~al~~~~prvIv--v~gti~~~~~~G~~t~~~c~~~~~~~~~~~ 74 (359)
T 1idk_A 2 GVSGSAEGFAKGVTGGGSATPVYPDTIDE-----LVSYLGDDEARVIV--LTKTFDFTDSEGTTTGTGCAPWGTASACQV 74 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCCBCCCSHHH-----HHHHHHSSSCEEEE--ECSEEECTTTTCEEEEEEECTTCSSTTBCE
T ss_pred CCCCCCccccCCCCCCCCceEEecCCHHH-----HHHHHcCCCceEEE--ECCEEEeccccCcccccccccccccccccc
Confidence 45668999999999999999999999999 99999999999999 58999963
Q ss_pred ---------------------------eeeeecCCeEEEeecCceEEecCcEEEe-ccCcEEEeeeEEecCCC---CCCC
Q 045906 72 ---------------------------SHLSVSSYKTIDGRGQRVKLTGKGLRLK-ECEHVIICNLEFECGKG---PDAD 120 (125)
Q Consensus 72 ---------------------------~~l~V~snkTI~G~g~~~~i~G~gl~i~-~~~NVIIrNL~i~~~~~---~~~D 120 (125)
.+|.|.|||||+|+|.+++|.|.+|+|+ +++|||||||+||+.++ +++|
T Consensus 75 ~~~~~~w~~~~~~~~~~~~~t~~~~~~~~l~v~snkTI~G~G~~~~i~G~gl~i~~~a~NVIIrnL~i~~~~~~~~~g~D 154 (359)
T 1idk_A 75 AIDQDDWCENYEPDAPSVSVEYYNAGTLGITVTSNKSLIGEGSSGAIKGKGLRIVSGAENIIIQNIAVTDINPKYVWGGD 154 (359)
T ss_dssp EECGGGHHHHHSCCSCEEEEEEESSTTSCEEECSSEEEEECTTTCEEESCCEEECTTCEEEEEESCEEEEECTTEETSCC
T ss_pred ccccccccccccccCccccccccccccceEEeCCCceEEEecCCeEEecceEEEecCCCcEEEeCeEEEcccccccccCC
Confidence 3589999999999999999999999998 89999999999999764 6789
Q ss_pred eeeeC
Q 045906 121 AIQIK 125 (125)
Q Consensus 121 aI~I~ 125 (125)
+|+|.
T Consensus 155 aI~i~ 159 (359)
T 1idk_A 155 AITLD 159 (359)
T ss_dssp SEEEC
T ss_pred ceeec
Confidence 99874
No 5
>1pcl_A Pectate lyase E; lyase (acting on polysaccharides); 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1
Probab=99.94 E-value=6.2e-27 Score=193.80 Aligned_cols=105 Identities=26% Similarity=0.352 Sum_probs=93.0
Q ss_pred cccCCcccccc---CCcCCCCcc-eEEEcCCCCCCCchHHHhh--hcCCCeEEEEeeeeEEEeCe--------------e
Q 045906 14 ALAGQAEGFGR---LAIGGLHGP-LYHVTTLADDGPGSLREGC--RMKEPLWIVFEVSGTIHLRS--------------H 73 (125)
Q Consensus 14 ~~~~~~~Gfg~---~ttGG~gg~-~~~Vtt~~d~g~GsLr~a~--~~~~p~iIvf~vsGtI~l~~--------------~ 73 (125)
+...+++|||+ +||||++|+ +|+|||++| |++|| +.++||+|+ |+|+|++.. +
T Consensus 3 ~~~~~~~G~a~~~~gtTGG~~g~~v~~Vtt~~~-----L~~al~~~~~~p~VI~--V~GtI~~~~~~~~~s~~~~~~~~~ 75 (355)
T 1pcl_A 3 ETDAATTGWATQNGGTTGGAKAAKAVEVKNISD-----FKKALNGTDSSAKIIK--VTGPIDISGGKAYTSFDDQKARSQ 75 (355)
T ss_pred ccccCCcceeecCCCCccCCCCceEEEeCCHHH-----HHHHHhhCCCCcEEEE--ECCEEecCCcccccccccccccee
Confidence 34456899998 899999997 699999999 99999 789999776 999999874 7
Q ss_pred eeecCCeEEEeecCceEEecCcEEEeccCcEEEeeeEEecCCC------------CCCCeeeeC
Q 045906 74 LSVSSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFECGKG------------PDADAIQIK 125 (125)
Q Consensus 74 l~V~snkTI~G~g~~~~i~G~gl~i~~~~NVIIrNL~i~~~~~------------~~~DaI~I~ 125 (125)
|+|.|||||+|+|.+++|.|.+|+|++++|||||||+|++... .++|+|+|.
T Consensus 76 l~v~sn~TI~G~G~~~~i~g~gl~i~~~~NVIIrnl~i~~~~~~~p~~~~~~g~~~~~DaI~i~ 139 (355)
T 1pcl_A 76 ISIPSNTTIIGVGSNGKFTNGSLVIKGVKNVILRNLYIETPVDVAPHYESGDGWNAEWDAAVID 139 (355)
T ss_pred EEeCCCeEEEEecCCeEEecCEEEEecCCeEEEeeeEEEcCcccccccccccCccccCceEEec
Confidence 8899999999999999999999999999999999999997531 357999874
No 6
>1pe9_A Pectate lyase A; parallel beta helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1ooc_A 1jta_A 1jrg_A
Probab=99.94 E-value=6.9e-27 Score=194.05 Aligned_cols=100 Identities=23% Similarity=0.393 Sum_probs=91.1
Q ss_pred cccccc---CCcCCCCc---ceEEEcCCCCCCCchHHHhh-hcCCCeEEEEeeeeEEEeCe--------------eeeec
Q 045906 19 AEGFGR---LAIGGLHG---PLYHVTTLADDGPGSLREGC-RMKEPLWIVFEVSGTIHLRS--------------HLSVS 77 (125)
Q Consensus 19 ~~Gfg~---~ttGG~gg---~~~~Vtt~~d~g~GsLr~a~-~~~~p~iIvf~vsGtI~l~~--------------~l~V~ 77 (125)
++|||+ +||||++| ++|+|||++| |++|| ++++||+|+ |+|+|++.. +|+|.
T Consensus 14 ~~Gfa~~~~gtTGG~~g~~~~v~~Vtt~~d-----L~~al~~~~~p~vI~--V~GtI~~~~~~~~~s~~~~~~~~~l~v~ 86 (361)
T 1pe9_A 14 TVGWASQNGFTTGGAAATSDNIYIVTNISE-----FTSALSAGAEAKIIQ--IKGTIDISGGTPYTDFADQKARSQINIP 86 (361)
T ss_dssp SSSGGGSSSCCCTTTTCCGGGEEEECSHHH-----HHHHHTTTTSCEEEE--ECSEEETTTTCCCCSHHHHHHHSEEECC
T ss_pred CCceeecCCCCcCCCCCccccEEEeCCHHH-----HHHHHhcCCCcEEEE--ECCEEecCCccccccccccccceeEEec
Confidence 899995 99999998 7899999999 99999 899999887 999999974 78999
Q ss_pred CCeEEEeecCceEEecCcEEE---eccCcEEEeeeEEecCCC------------CCCCeeeeC
Q 045906 78 SYKTIDGRGQRVKLTGKGLRL---KECEHVIICNLEFECGKG------------PDADAIQIK 125 (125)
Q Consensus 78 snkTI~G~g~~~~i~G~gl~i---~~~~NVIIrNL~i~~~~~------------~~~DaI~I~ 125 (125)
|||||+|+|.+++|.|.+|+| ++++|||||||+|+++.. .++|+|+|+
T Consensus 87 snkTI~G~G~~~~i~g~gl~i~~~~~~~NVIIrNl~i~~~~d~~p~~~~~~g~~~~~DaI~i~ 149 (361)
T 1pe9_A 87 ANTTVIGLGTDAKFINGSLIIDGTDGTNNVIIRNVYIQTPIDVEPHYEKGDGWNAEWDAMNIT 149 (361)
T ss_dssp SSEEEEECTTCCEEESSEEEEEGGGTCEEEEEESCEEECCCCSSCEEETTTEEECCCCSEEEE
T ss_pred CCcEEEccCCCeEEecCEEEEecCCCCceEEEeCeEEEcCcccccccccccCcccCCceEEee
Confidence 999999999999999999999 789999999999997631 358999874
No 7
>1vbl_A Pectate lyase 47; PL 47, thermostable, bacillus subtilis, pectin, calcium ION; 1.91A {Bacillus SP}
Probab=99.94 E-value=1.2e-26 Score=195.59 Aligned_cols=109 Identities=30% Similarity=0.443 Sum_probs=97.1
Q ss_pred ccccccccCCcccccc---CCcCCCCcc---eEEEcCCCCCCCchHHHhhhc--------CCCeEEEEeeeeEEEeCe--
Q 045906 9 DCSLRALAGQAEGFGR---LAIGGLHGP---LYHVTTLADDGPGSLREGCRM--------KEPLWIVFEVSGTIHLRS-- 72 (125)
Q Consensus 9 ~~~~~~~~~~~~Gfg~---~ttGG~gg~---~~~Vtt~~d~g~GsLr~a~~~--------~~p~iIvf~vsGtI~l~~-- 72 (125)
+..+++||. ++|||+ +||||++|+ +|+|||++| |++||++ ++||||+ |+|+|++..
T Consensus 2 ~~~~~~~~~-~~GfA~~~~gTTGG~~a~~~~v~tVtt~ae-----L~~al~~~~~~~~~~~~priI~--V~GtId~~~~~ 73 (416)
T 1vbl_A 2 ELGHEVLKP-YDGWAAYGEGTTGGAMASPQNVFVVTNRTE-----LIQALGGNNHTNQYNSVPKIIY--VKGTIDLNVDD 73 (416)
T ss_dssp CGGGCCCCT-TSSGGGSTTCCCTTTTCCGGGEEEECSHHH-----HHHHTTSCTTGGGGCCSCEEEE--ECSEEESSBCT
T ss_pred CccccccCC-CcceeecCCCCcCCCCCccccEEEeCCHHH-----HHHHHhccccccccCCCCEEEE--ECCEEecccCC
Confidence 467899998 999999 999999995 899999999 9999985 4899999 999999752
Q ss_pred -----------------------------------------------------eeeecCCeEEEeecCceEEecCcEEEe
Q 045906 73 -----------------------------------------------------HLSVSSYKTIDGRGQRVKLTGKGLRLK 99 (125)
Q Consensus 73 -----------------------------------------------------~l~V~snkTI~G~g~~~~i~G~gl~i~ 99 (125)
+|+|.|||||+|+|.+++|.|.+|+|+
T Consensus 74 ~g~~~~c~~~~~~~~~~~~y~~~~~~~~~~~~~~~g~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~gl~i~ 153 (416)
T 1vbl_A 74 NNQPVGPDFYKDPHFDFEAYLREYDPATWGKKEVEGPLEEARVRSQKKQKDRIMVYVGSNTSIIGVGKDAKIKGGGFLIK 153 (416)
T ss_dssp TSCBCCHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEECTTCCEEESCEEEEE
T ss_pred CCccccccccccCCcchhhhhhhhCccccccccCCCCcccccccccccccceeEEEeCCCeeEEecCCCeEEecCEEEee
Confidence 678899999999999999999999999
Q ss_pred ccCcEEEeeeEEecCCC----------------CCCCeeeeC
Q 045906 100 ECEHVIICNLEFECGKG----------------PDADAIQIK 125 (125)
Q Consensus 100 ~~~NVIIrNL~i~~~~~----------------~~~DaI~I~ 125 (125)
+++|||||||+|++... .++|+|+|+
T Consensus 154 ~~~NVIIrNl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~ 195 (416)
T 1vbl_A 154 NVDNVIIRNIEFEAPLDYFPEWDPTDGTLGEWNSEYDSISIE 195 (416)
T ss_dssp SCEEEEEESCEEECCCCSSCEEETTSTTTCEEECCCCSEEEE
T ss_pred cCceEEEeCeEEEcCccccccccccccccccccCCCceEEec
Confidence 99999999999997631 367999873
No 8
>2o04_A Pectate lyase, PL; hexasaccharide compound II, calciums; HET: ADA; 1.70A {Bacillus subtilis} PDB: 2nzm_A* 2o0v_A* 2o0w_A 2o17_A* 2o1d_A* 2bsp_A 1bn8_A 3krg_A*
Probab=99.94 E-value=1.5e-26 Score=194.14 Aligned_cols=108 Identities=28% Similarity=0.477 Sum_probs=96.8
Q ss_pred ccccccccCCcccccc---CCcCCCCcc---eEEEcCCCCCCCchHHHhh---hcCCCeEEEEeeeeEEEeCe-------
Q 045906 9 DCSLRALAGQAEGFGR---LAIGGLHGP---LYHVTTLADDGPGSLREGC---RMKEPLWIVFEVSGTIHLRS------- 72 (125)
Q Consensus 9 ~~~~~~~~~~~~Gfg~---~ttGG~gg~---~~~Vtt~~d~g~GsLr~a~---~~~~p~iIvf~vsGtI~l~~------- 72 (125)
+..+++||. ++|||+ +||||++|+ +|+|||++| |++|| ++++||||+ |+|+|++..
T Consensus 2 ~~~~~~~~~-a~Gfa~~~~gTTGG~~a~~~~v~tVtt~ae-----L~~al~~~~~~~priI~--v~GtId~~~~~~g~~~ 73 (399)
T 2o04_A 2 DLGHQTLGS-NDGWGAYSTGTTGGSKASSSNVYTVSNRNQ-----LVSALGKETNTTPKIIY--IKGTIDMNVDDNLKPL 73 (399)
T ss_dssp CTTTCCCCT-TSSGGGSTTCCCTTTTCCGGGEEEECSHHH-----HHHHHCCTTCCSCEEEE--ECSEEESSBCTTCCBC
T ss_pred CccccccCC-CcceeecCCCCcCCCCCccceEEEeCCHHH-----HHHHHHhccCCCCEEEE--EcCEEecccCCccccc
Confidence 467899998 999999 999999996 899999999 99999 789999999 899999741
Q ss_pred ------------------------------------------------eeeecCCeEEEeecCceEEecCcEEEeccCcE
Q 045906 73 ------------------------------------------------HLSVSSYKTIDGRGQRVKLTGKGLRLKECEHV 104 (125)
Q Consensus 73 ------------------------------------------------~l~V~snkTI~G~g~~~~i~G~gl~i~~~~NV 104 (125)
+|+|.|||||+|+|.+++|.|.+|+|+. +||
T Consensus 74 ~c~~~~~~~~~~~~~~~~~~~~~~~~~~~sg~~~~~~~~s~~~~~~~~~i~v~snkTI~G~G~~~~i~g~gl~i~~-~NV 152 (399)
T 2o04_A 74 GLNDYKDPEYDLDKYLKAYDPSTWGKKEPSGTQEEARARSQKNQKARVMVDIPANTTIVGSGTNAKVVGGNFQIKS-DNV 152 (399)
T ss_dssp CHHHHCCTTCCHHHHHHHHCHHHHTTSCCCSHHHHHHHHHHHHHHHHHEEECCSSEEEEESSSCCEEESCEEEECS-EEE
T ss_pred cccccccCCcchhhhhhcccccccccccCCCcccccccccccccccceEEEeCCCceEEeccCCeEEeeCEEEeeC-CCE
Confidence 5788999999999999999999999998 999
Q ss_pred EEeeeEEecCCC----------------CCCCeeeeC
Q 045906 105 IICNLEFECGKG----------------PDADAIQIK 125 (125)
Q Consensus 105 IIrNL~i~~~~~----------------~~~DaI~I~ 125 (125)
|||||+|++... .++|+|+|+
T Consensus 153 IIrnl~i~~~~~~~p~~~p~~~~~~~~~~~~DaI~i~ 189 (399)
T 2o04_A 153 IIRNIEFQDAYDYFPQWDPTDGSSGNWNSQYDNITIN 189 (399)
T ss_dssp EEESCEEECCCCSSCEEETTSSTTCEEECCCCSEEEE
T ss_pred EEeCeEEecCccccccccccccccccccCCCCeEEec
Confidence 999999997631 367999873
No 9
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=99.93 E-value=9.4e-27 Score=192.88 Aligned_cols=105 Identities=30% Similarity=0.378 Sum_probs=93.3
Q ss_pred cccCCccccccCCcCCCCcceEEEcCCCCCCCchHHHhhhcCCCeEEEEeeeeEEEeC----------------------
Q 045906 14 ALAGQAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRMKEPLWIVFEVSGTIHLR---------------------- 71 (125)
Q Consensus 14 ~~~~~~~Gfg~~ttGG~gg~~~~Vtt~~d~g~GsLr~a~~~~~p~iIvf~vsGtI~l~---------------------- 71 (125)
+..+.+||||++||||++|++++|||++| |++||++++||||+ ++|+|++.
T Consensus 2 ~~~~~a~Gfa~~tTGG~gg~~v~Vtt~~~-----L~~al~~~~prvIv--v~gtid~~g~~g~~~~~~c~~~~~~~~~~~ 74 (359)
T 1qcx_A 2 GVVGAAEGFAHGVTGGGSASPVYPTTTDE-----LVSYLGDNEPRVII--LDQTFDFTGTEGTETTTGCAPWGTASQCQV 74 (359)
T ss_dssp CCCSCCCGGGTTCCTTTTCCCBCCCSHHH-----HHHHHHSSSCEEEE--ECSEEECTTTTCEEEEEEECTTCSSTTBCE
T ss_pred CcCCCcceeecCCcCCCCcceEEeCCHHH-----HHHHHcCCCCeEEE--ECcEEeeccccccccccccccccccccccc
Confidence 34567999999999999999999999999 99999999999999 46666631
Q ss_pred ---------------------------eeeeecCCeEEEeecCceEEecCcEEEe-ccCcEEEeeeEEecCCC---CCCC
Q 045906 72 ---------------------------SHLSVSSYKTIDGRGQRVKLTGKGLRLK-ECEHVIICNLEFECGKG---PDAD 120 (125)
Q Consensus 72 ---------------------------~~l~V~snkTI~G~g~~~~i~G~gl~i~-~~~NVIIrNL~i~~~~~---~~~D 120 (125)
.+|.|.|||||+|+|.+++|.|.+|+|+ +++|||||||+||++.+ +++|
T Consensus 75 ~i~~~~~~~~~~~~~p~~ti~~~~a~~~~i~v~snkTI~G~g~~~~I~G~gl~i~~~a~NVIIrnl~i~~~~~~~~~~~D 154 (359)
T 1qcx_A 75 AINLHSWCDNYQASAPKVSVTYDKAGILPITVNSNKSIVGQGTKGVIKGKGLRVVSGAKNVIIQNIAVTDINPKYVWGGD 154 (359)
T ss_dssp EECGGGHHHHHCTTSCEEEEEEEGGGTSCEECCSSEEEEECTTCCEEESCCEEEETTCCCEEEESCEEEEECTTEETSCC
T ss_pred eecccccccccccCCccceeeecccccceEEeCCCceEEecCCceEEecceEEEecCCCCEEEeCcEEEecCCcccccCc
Confidence 2588999999999999999999999998 89999999999998764 5789
Q ss_pred eeeeC
Q 045906 121 AIQIK 125 (125)
Q Consensus 121 aI~I~ 125 (125)
+|+|.
T Consensus 155 aI~i~ 159 (359)
T 1qcx_A 155 AITVD 159 (359)
T ss_dssp SEEEE
T ss_pred eeEec
Confidence 99873
No 10
>2qy1_A Pectate lyase II; GAG lyase; 1.90A {Xanthomonas campestris PV} PDB: 2qxz_A 2qx3_A
Probab=99.92 E-value=2.4e-26 Score=188.31 Aligned_cols=99 Identities=23% Similarity=0.355 Sum_probs=89.5
Q ss_pred CccccccCCcCCCCcceEEEcCCCCCCCchHHHhhhc---CCCeEEEEeeeeEEEeCe---------------eeeecCC
Q 045906 18 QAEGFGRLAIGGLHGPLYHVTTLADDGPGSLREGCRM---KEPLWIVFEVSGTIHLRS---------------HLSVSSY 79 (125)
Q Consensus 18 ~~~Gfg~~ttGG~gg~~~~Vtt~~d~g~GsLr~a~~~---~~p~iIvf~vsGtI~l~~---------------~l~V~sn 79 (125)
+|+|||++||||++|++|+|||++| |++||+. ++||||+| +|+|++.+ +|++.||
T Consensus 1 ga~Gfa~~ttGG~gg~~~~Vtt~~~-----L~~al~~~~~~~p~iI~~--~G~i~~~~~~~~c~~~~~~~~~~~l~v~sn 73 (330)
T 2qy1_A 1 GPVGYGAGTTGGGNKVPVNVATFEA-----MQSAIDSYSGSGGLVLNY--TGKFDFGTIKDVCAQWKLPAKTVQIKNKSD 73 (330)
T ss_dssp CCCSTTTTCCTTTTSCCEEECSHHH-----HHHHHHHSCSSSCEEEEE--CCBCCGGGCCCGGGSTTSCCCEEEEESCCS
T ss_pred CCceeecCCCCCCCceEEEcCCHHH-----HHHHHhccCCCCCEEEEE--ccEEecccccccccccccccceeEEEcCCC
Confidence 3899999999999999999999999 9999984 89999995 89999975 7888999
Q ss_pred eEEEeecCceEEecCcEEEe-ccCcEEEeeeEEecCCC-CCCCeeeeC
Q 045906 80 KTIDGRGQRVKLTGKGLRLK-ECEHVIICNLEFECGKG-PDADAIQIK 125 (125)
Q Consensus 80 kTI~G~g~~~~i~G~gl~i~-~~~NVIIrNL~i~~~~~-~~~DaI~I~ 125 (125)
|||+|+ +++|.|.+|+|+ +++|||||||+|++..+ +++|+|+|+
T Consensus 74 ~TI~G~--~a~i~g~gl~i~~~~~NVIIrnl~i~~~~~~~~~DaI~i~ 119 (330)
T 2qy1_A 74 VTIKGA--NGSAANFGIRVVGNAHNVIIQNMTIGLLQGGEDADSISLE 119 (330)
T ss_dssp EEEEEC--TTCBBSSEEEEESSCEEEEEESCEEESCSSGGGCCSEEEE
T ss_pred eEEECC--CcEEeeeeEEEeCCCCeEEEeCeEEeCCCCCCCCcceeec
Confidence 999875 568999999999 99999999999999875 478999873
No 11
>1air_A Pectate lyase C, PELC; pectate cleavage, pectinolyitc activity, trans-elimination; 2.20A {Erwinia chrysanthemi} SCOP: b.80.1.1 PDB: 1o88_A 1o8d_A 1o8e_A 1o8f_A 1o8g_A 1o8h_A 1o8i_A 1o8j_A 1o8k_A 1o8l_A 1o8m_A 1plu_A 2pec_A 2ewe_A*
Probab=99.75 E-value=8.8e-19 Score=144.89 Aligned_cols=97 Identities=19% Similarity=0.258 Sum_probs=77.1
Q ss_pred Ccccccc---CCcCCCCcceEEEcCCCCCCCchHHHhhhc-------------CCCeEEEEeeeeEEEeC----------
Q 045906 18 QAEGFGR---LAIGGLHGPLYHVTTLADDGPGSLREGCRM-------------KEPLWIVFEVSGTIHLR---------- 71 (125)
Q Consensus 18 ~~~Gfg~---~ttGG~gg~~~~Vtt~~d~g~GsLr~a~~~-------------~~p~iIvf~vsGtI~l~---------- 71 (125)
...|||+ +|+||. .+++|+|+++ |++|+++ ++|++ |.|+|+|++.
T Consensus 3 ~~~G~at~~Ggt~gg~--~~~tvtt~~~-----L~~al~~~~~~~~g~~~~~~~~p~v--i~v~GtId~~~~~~~~~~~~ 73 (353)
T 1air_A 3 DTGGYAATAGGNVTGA--VSKTATSMQD-----IVNIIDAARLDANGKKVKGGAYPLV--ITYTGNEDSLINAAAANICG 73 (353)
T ss_dssp BCSSSCBCCTTCSTTC--EEEEESSHHH-----HHHHHHHTTBCTTSCBCTBCSSCEE--EEECCCCHHHHHHHHTSGGG
T ss_pred CCCcceecCCCCCCCc--ceEEeCCHHH-----HHHHHHhhccccccccccCCCceEE--EEEccEEecccccccccccc
Confidence 3689987 566554 6789999999 9999953 45654 5599999872
Q ss_pred ------eeeee---cCCeEEEeecCceEEecCcEEEeccCcEEEeeeEEecCCC--CCCCeeeeC
Q 045906 72 ------SHLSV---SSYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFECGKG--PDADAIQIK 125 (125)
Q Consensus 72 ------~~l~V---~snkTI~G~g~~~~i~G~gl~i~~~~NVIIrNL~i~~~~~--~~~DaI~I~ 125 (125)
+++.| .|||||+|+.. .+.|.+|+|++++|||||||+|++... +++|+|+|.
T Consensus 74 ~~~~~~~~~~i~~~~sn~TI~G~~~--~~~g~gl~i~~~~NVIIrnl~i~~~~~~~~~~DaI~i~ 136 (353)
T 1air_A 74 QWSKDPRGVEIKEFTKGITIIGANG--SSANFGIWIKKSSDVVVQNMRIGYLPGGAKDGDMIRVD 136 (353)
T ss_dssp STTSCCCEEEEESBCSCEEEEECTT--CCBSSEEEEESCCSEEEESCEEESCSCGGGTCCSEEEE
T ss_pred ccccCCCceEEEecCCCEEEEeccC--CCCCceEEEeccCcEEEeccEEEeCCCCCCCCCeEEee
Confidence 56777 59999999843 466889999999999999999998753 578999873
No 12
>1xg2_A Pectinesterase 1; protein-protein complex, beta helix,four helix bundle, hydrolase/hydrolase inhibitor complex; 1.90A {Solanum lycopersicum}
Probab=94.61 E-value=0.19 Score=40.48 Aligned_cols=65 Identities=20% Similarity=0.231 Sum_probs=45.6
Q ss_pred hHHHhhhc----C-CCeEEEEeeeeEEEeCeeeeec---CCeEEEeecC-ceEEecC-------------cEEEeccCcE
Q 045906 47 SLREGCRM----K-EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQ-RVKLTGK-------------GLRLKECEHV 104 (125)
Q Consensus 47 sLr~a~~~----~-~p~iIvf~vsGtI~l~~~l~V~---snkTI~G~g~-~~~i~G~-------------gl~i~~~~NV 104 (125)
++.+|+.. + .+.+|.+ ..|+.+ +.|.|. +|+||.|.|. ...|++. .|.+ .++|+
T Consensus 17 TIq~AI~aap~~~~~~~~I~I-~~G~Y~--E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v-~a~~f 92 (317)
T 1xg2_A 17 TLAEAVAAAPDKSKTRYVIYV-KRGTYK--ENVEVASNKMNLMIVGDGMYATTITGSLNVVDGSTTFRSATLAA-VGQGF 92 (317)
T ss_dssp SHHHHHHHSCSSCSSCEEEEE-CSEEEE--CCEEECTTSCSEEEEESCTTTEEEEECCCTTTTCCSGGGCSEEE-CSTTC
T ss_pred cHHHHHhhcccCCCceEEEEE-cCCEEe--eeeecCCCCCcEEEEEcCCCCcEEEecccccCCCcccceeEEEE-ECCCE
Confidence 58888863 2 2334442 478874 557774 7899999974 4566643 3777 59999
Q ss_pred EEeeeEEecCC
Q 045906 105 IICNLEFECGK 115 (125)
Q Consensus 105 IIrNL~i~~~~ 115 (125)
++|||+|++..
T Consensus 93 ~~~~lt~~Nt~ 103 (317)
T 1xg2_A 93 ILQDICIQNTA 103 (317)
T ss_dssp EEESCEEEECC
T ss_pred EEEEeEEeccc
Confidence 99999999764
No 13
>1gq8_A Pectinesterase; hydrolase, carboxylic ester hydrolase; 1.75A {Daucus carota} SCOP: b.80.1.5
Probab=94.49 E-value=0.3 Score=39.38 Aligned_cols=65 Identities=12% Similarity=0.175 Sum_probs=45.3
Q ss_pred hHHHhhhc----C-CCeEEEEeeeeEEEeCeeeeec---CCeEEEeecC-ceEEecC-------------cEEEeccCcE
Q 045906 47 SLREGCRM----K-EPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQ-RVKLTGK-------------GLRLKECEHV 104 (125)
Q Consensus 47 sLr~a~~~----~-~p~iIvf~vsGtI~l~~~l~V~---snkTI~G~g~-~~~i~G~-------------gl~i~~~~NV 104 (125)
++.+|+.. + .+.+|.+ ..|+.+ ..|.|. +|+||.|.|. ...|++. .|.+. ++|+
T Consensus 21 TIq~AI~aap~~~~~~~~I~I-~~G~Y~--E~V~I~~~k~~Itl~G~g~~~tiI~~~~~~~~g~~t~~satv~v~-a~~f 96 (319)
T 1gq8_A 21 TVSEAVAAAPEDSKTRYVIRI-KAGVYR--ENVDVPKKKKNIMFLGDGRTSTIITASKNVQDGSTTFNSATVAAV-GAGF 96 (319)
T ss_dssp SHHHHHHHSCSSCSSCEEEEE-CSEEEE--CCEEECTTCCSEEEEESCTTTEEEEECCCTTTTCCTGGGCSEEEC-STTC
T ss_pred CHHHHHHhccccCCceEEEEE-cCCeEe--eeeeccCCCccEEEEEcCCCccEEEecccccCCCCccceEEEEEE-CCCE
Confidence 58888863 2 2334442 478875 457774 6799999974 4556643 36774 8999
Q ss_pred EEeeeEEecCC
Q 045906 105 IICNLEFECGK 115 (125)
Q Consensus 105 IIrNL~i~~~~ 115 (125)
++|||+|++..
T Consensus 97 ~~~nlt~~Nt~ 107 (319)
T 1gq8_A 97 LARDITFQNTA 107 (319)
T ss_dssp EEEEEEEEECC
T ss_pred EEEEeEeEccC
Confidence 99999999854
No 14
>1ru4_A Pectate lyase, PEL9A; parallel beta-helix; 1.60A {Erwinia chrysanthemi} SCOP: b.80.1.9
Probab=93.24 E-value=1.7 Score=35.90 Aligned_cols=86 Identities=15% Similarity=0.174 Sum_probs=53.1
Q ss_pred CCCCcceEEEcCC-CCCCCc-------hHHHhhhcCCC-eEEEEeeeeEEE--eC----eeeeec-CC-----eEEEeec
Q 045906 28 GGLHGPLYHVTTL-ADDGPG-------SLREGCRMKEP-LWIVFEVSGTIH--LR----SHLSVS-SY-----KTIDGRG 86 (125)
Q Consensus 28 GG~gg~~~~Vtt~-~d~g~G-------sLr~a~~~~~p-~iIvf~vsGtI~--l~----~~l~V~-sn-----kTI~G~g 86 (125)
|-..+.+++|... +|+.+| +|.+|+..-.| -+|++ ..|+.. +. ..|.+. |. +||.+.+
T Consensus 10 ~~~~~~~~yVsp~Gsd~~~G~t~~~P~tiq~Ai~~a~pGdtI~l-~~GtY~~~~~e~~~~~i~~~~sGt~~~pIti~~~~ 88 (400)
T 1ru4_A 10 GISTKRIYYVAPNGNSSNNGSSFNAPMSFSAAMAAVNPGELILL-KPGTYTIPYTQGKGNTITFNKSGKDGAPIYVAAAN 88 (400)
T ss_dssp TCCCSCEEEECTTCCTTCCSSSTTSCBCHHHHHHHCCTTCEEEE-CSEEEECCCBTTBCCCEEECCCCBTTBCEEEEEGG
T ss_pred cccCccEEEEcCCCCCCCCCccccCCccHHHHHhhCCCCCEEEE-CCCeEccccccccceeEEecCCCCCCCCEEEEEec
Confidence 3344567777643 344455 99999985333 34443 588887 33 345553 33 7888874
Q ss_pred -CceEEe-----c------CcEEEeccCcEEEeeeEEecCC
Q 045906 87 -QRVKLT-----G------KGLRLKECEHVIICNLEFECGK 115 (125)
Q Consensus 87 -~~~~i~-----G------~gl~i~~~~NVIIrNL~i~~~~ 115 (125)
....|. + .+|.| .++++.|++|+|++..
T Consensus 89 g~~~vI~~~~~~g~~~~~~~~i~i-~~~~~~i~gl~I~n~g 128 (400)
T 1ru4_A 89 CGRAVFDFSFPDSQWVQASYGFYV-TGDYWYFKGVEVTRAG 128 (400)
T ss_dssp GCCEEEECCCCTTCCCTTCCSEEE-CSSCEEEESEEEESCS
T ss_pred CCCCEEeCCccCCccccceeEEEE-ECCeEEEEeEEEEeCC
Confidence 466665 2 45777 5788888888887653
No 15
>3uw0_A Pectinesterase; right-handed beta-helix, carbohydrate esterase, hydrolase; 3.50A {Yersinia enterocolitica subsp}
Probab=91.81 E-value=0.58 Score=38.46 Aligned_cols=66 Identities=17% Similarity=0.255 Sum_probs=44.4
Q ss_pred chHHHhhhc----CCCeEEEEeeeeEEEeCeeeeec-CCeEEEeecC-ceEEecC-------------------cEEEec
Q 045906 46 GSLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS-SYKTIDGRGQ-RVKLTGK-------------------GLRLKE 100 (125)
Q Consensus 46 GsLr~a~~~----~~p~iIvf~vsGtI~l~~~l~V~-snkTI~G~g~-~~~i~G~-------------------gl~i~~ 100 (125)
-++.+|+.. +.+.+|.+ ..|+.+ +.|.|. +|+||.|.+. ...|++. -+.+ .
T Consensus 45 ~TIq~Ai~aa~~~~~~~~I~I-~~G~Y~--E~v~I~k~~itl~G~g~~~TiIt~~~~~~~~~~~g~~~gt~~saTv~V-~ 120 (364)
T 3uw0_A 45 SSINAALKSAPKDDTPFIIFL-KNGVYT--ERLEVARSHVTLKGENRDGTVIGANTAAGMLNPQGEKWGTSGSSTVLV-N 120 (364)
T ss_dssp CCHHHHHHHSCSSSSCEEEEE-CSEEEC--CCEEECSTTEEEEESCTTTEEEEECCCTTSBCTTCSBCCTTTCCSEEE-C
T ss_pred ccHHHHHhhcccCCCcEEEEE-eCCEEE--EEEEEcCCeEEEEecCCCCeEEEccccccccccccccccccCeeEEEE-E
Confidence 357788763 33445543 478764 456674 6799999975 4555532 3556 5
Q ss_pred cCcEEEeeeEEecCC
Q 045906 101 CEHVIICNLEFECGK 115 (125)
Q Consensus 101 ~~NVIIrNL~i~~~~ 115 (125)
++|+++|||+|++..
T Consensus 121 a~~f~a~nitf~Nt~ 135 (364)
T 3uw0_A 121 APNFTAENLTIRNDF 135 (364)
T ss_dssp STTCEEEEEEEEECC
T ss_pred CCCEEEEeeeeEcCC
Confidence 899999999999763
No 16
>2nsp_A Pectinesterase A; michaelis complex, hydrolase; HET: M8C ADA; 1.70A {Erwinia chrysanthemi} PDB: 2nst_A* 2nt6_A* 2nt9_A* 2ntp_A* 2ntb_A* 2ntq_A* 1qjv_A
Probab=91.62 E-value=0.77 Score=37.26 Aligned_cols=67 Identities=9% Similarity=0.215 Sum_probs=45.5
Q ss_pred CchHHHhhhc----CCCeEEEEeeeeEEEeCeeeeec-CCeEEEeecC-ceEEecC-------------------cEEEe
Q 045906 45 PGSLREGCRM----KEPLWIVFEVSGTIHLRSHLSVS-SYKTIDGRGQ-RVKLTGK-------------------GLRLK 99 (125)
Q Consensus 45 ~GsLr~a~~~----~~p~iIvf~vsGtI~l~~~l~V~-snkTI~G~g~-~~~i~G~-------------------gl~i~ 99 (125)
--++.+||.. +.+.+|.+ ..|+.+ ++|.|. +|+||.|.|. ...|.+. .|.+.
T Consensus 18 f~TIq~Ai~aap~~~~~~~I~I-~~G~Y~--E~V~I~k~~Itl~G~g~~~tiI~~~~~~~~~~~~g~~~gT~~satv~v~ 94 (342)
T 2nsp_A 18 FKTIADAIASAPAGSTPFVILI-KNGVYN--ERLTITRNNLHLKGESRNGAVIAAATAAGTLKSDGSKWGTAGSSTITIS 94 (342)
T ss_dssp BSSHHHHHHTSCSSSSCEEEEE-CSEEEE--CCEEECSTTEEEEESCTTTEEEEECCCTTCBCTTSCBCHHHHTCSEEEC
T ss_pred cchHHHHHHhcccCCCcEEEEE-eCCEEE--EEEEEecCeEEEEecCCCCeEEEecccccccccccCcccccceeEEEEE
Confidence 3457888864 22334442 578875 457774 7899999974 4555432 36664
Q ss_pred ccCcEEEeeeEEecCC
Q 045906 100 ECEHVIICNLEFECGK 115 (125)
Q Consensus 100 ~~~NVIIrNL~i~~~~ 115 (125)
++|+++|||+|++..
T Consensus 95 -a~~f~a~nlt~~Nt~ 109 (342)
T 2nsp_A 95 -AKDFSAQSLTIRNDF 109 (342)
T ss_dssp -SBSCEEEEEEEEECC
T ss_pred -CCCEEEEeeEEEccc
Confidence 899999999999764
No 17
>1dbg_A Chondroitinase B; beta helix, polysaccharide lyase, dematan sulfate; HET: MAN RAM GCU MXY G4D BGC; 1.70A {Pedobacter heparinus} SCOP: b.80.1.4 PDB: 1dbo_A* 1ofl_A* 1ofm_A*
Probab=89.67 E-value=0.86 Score=38.98 Aligned_cols=73 Identities=25% Similarity=0.286 Sum_probs=50.2
Q ss_pred EEEcCCCCCCCchHHHhhhcCCC-eEEEEeeeeEEEeCeeeee------cCCeEEEeec-CceEEecCc-EEEeccCcEE
Q 045906 35 YHVTTLADDGPGSLREGCRMKEP-LWIVFEVSGTIHLRSHLSV------SSYKTIDGRG-QRVKLTGKG-LRLKECEHVI 105 (125)
Q Consensus 35 ~~Vtt~~d~g~GsLr~a~~~~~p-~iIvf~vsGtI~l~~~l~V------~snkTI~G~g-~~~~i~G~g-l~i~~~~NVI 105 (125)
++|.+.++ |.+|+..-.| .+|++ ..|+... ..+.+ ...+||.|.+ ..+.|.|.. |.|. +++|.
T Consensus 26 i~V~~~~~-----Lq~Ai~~A~pGDtI~L-~~GtY~~-~~i~i~~sGt~~~pItl~~~~~~~~vi~G~~~l~i~-g~~v~ 97 (506)
T 1dbg_A 26 QVVASNET-----LYQVVKEVKPGGLVQI-ADGTYKD-VQLIVSNSGKSGLPITIKALNPGKVFFTGDAKVELR-GEHLI 97 (506)
T ss_dssp CEECSHHH-----HHHHHHHCCTTCEEEE-CSEEEET-CEEEECCCCBTTBCEEEEESSTTSEEEEESCEEEEC-SSSEE
T ss_pred EEeCCHHH-----HHHHHHhCCCCCEEEE-CCCEEec-ceEEEecCCcCCCCEEEECCCCCccEEeCCceEEEE-cCCEE
Confidence 57876666 9999975333 34443 5788763 24665 4567888873 457788754 7774 78999
Q ss_pred EeeeEEecCC
Q 045906 106 ICNLEFECGK 115 (125)
Q Consensus 106 IrNL~i~~~~ 115 (125)
|++|+|++..
T Consensus 98 i~GL~i~~~~ 107 (506)
T 1dbg_A 98 LEGIWFKDGN 107 (506)
T ss_dssp EESCEEEEEC
T ss_pred EECeEEECCC
Confidence 9999998754
No 18
>3gq8_A Preneck appendage protein; beta helix, viral protein; HET: NHE; 2.00A {Bacillus phage PHI29} PDB: 3gq7_A* 3gq9_A* 3gqa_A
Probab=79.64 E-value=12 Score=32.99 Aligned_cols=20 Identities=25% Similarity=0.438 Sum_probs=16.1
Q ss_pred EEEeccCcEEEeeeEEecCC
Q 045906 96 LRLKECEHVIICNLEFECGK 115 (125)
Q Consensus 96 l~i~~~~NVIIrNL~i~~~~ 115 (125)
|.+..++||.|+|+++++..
T Consensus 137 I~f~~c~NV~I~gVti~NSp 156 (609)
T 3gq8_A 137 LSIRACHNVYIRDIEAVDCT 156 (609)
T ss_dssp EEEESCEEEEEEEEEEESCS
T ss_pred EEEEeeceEEEEeeEEEeCC
Confidence 56677889999999998764
No 19
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=75.47 E-value=3.6 Score=32.80 Aligned_cols=29 Identities=10% Similarity=0.337 Sum_probs=14.9
Q ss_pred EEEeccCcEEEeeeEEecCC-----CCCCCeeee
Q 045906 96 LRLKECEHVIICNLEFECGK-----GPDADAIQI 124 (125)
Q Consensus 96 l~i~~~~NVIIrNL~i~~~~-----~~~~DaI~I 124 (125)
+.+..++||.|+|++|.... .++.|+|.+
T Consensus 126 i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~ 159 (339)
T 2iq7_A 126 FSINSATTLGVYDVIIDNSAGDSAGGHNTDAFDV 159 (339)
T ss_dssp EEEESCEEEEEESCEEECGGGGGTTCCSCCSEEE
T ss_pred EEEeccCCEEEEEEEEECCccccccCCCCCcEEE
Confidence 34444555555555555431 234666654
No 20
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=74.90 E-value=4.6 Score=32.49 Aligned_cols=29 Identities=21% Similarity=0.383 Sum_probs=22.6
Q ss_pred cCcEEEeccCcEEEeeeEEecCCCCCCCeeeeC
Q 045906 93 GKGLRLKECEHVIICNLEFECGKGPDADAIQIK 125 (125)
Q Consensus 93 G~gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I~ 125 (125)
..|+.+..++||.|+|-.|+.+ .|||.||
T Consensus 201 tDGid~~~s~nV~I~n~~i~~g----DDcIaik 229 (376)
T 1bhe_A 201 TDGIDPMSSKNITIAYSNIATG----DDNVAIK 229 (376)
T ss_dssp CCSEEEESCEEEEEESCEEECS----SCSEEEE
T ss_pred CceEeecCCceEEEEeCEEecC----CCeEEEc
Confidence 4578888888888888888865 4888774
No 21
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=74.49 E-value=3.9 Score=32.66 Aligned_cols=29 Identities=14% Similarity=0.383 Sum_probs=15.7
Q ss_pred EEEeccCcEEEeeeEEecCC-----CCCCCeeee
Q 045906 96 LRLKECEHVIICNLEFECGK-----GPDADAIQI 124 (125)
Q Consensus 96 l~i~~~~NVIIrNL~i~~~~-----~~~~DaI~I 124 (125)
+.+..++||.|+|++|.... +++.|+|.+
T Consensus 130 i~i~~~~nv~i~~~~I~~~~~d~~~~~ntDGid~ 163 (339)
T 1ia5_A 130 FSVAGSDYLTLKDITIDNSDGDDNGGHNTDAFDI 163 (339)
T ss_dssp EEEESCEEEEEESCEEECGGGTTTTCCSCCSEEE
T ss_pred EEEecccCeEEeeEEEECCccccccCCCCCcEEe
Confidence 34445566666666665431 245677654
No 22
>3gqn_A Preneck appendage protein; beta helix, beta barrel, ATP binding, viral protein; HET: ATP; 2.15A {Bacillus phage PHI29} PDB: 3suc_A*
Probab=74.18 E-value=18 Score=32.74 Aligned_cols=20 Identities=25% Similarity=0.438 Sum_probs=16.7
Q ss_pred EEEeccCcEEEeeeEEecCC
Q 045906 96 LRLKECEHVIICNLEFECGK 115 (125)
Q Consensus 96 l~i~~~~NVIIrNL~i~~~~ 115 (125)
|.+.+++||.|+|+++++..
T Consensus 137 I~f~~ckNV~I~gVti~NSp 156 (772)
T 3gqn_A 137 LSIRACHNVYIRDIEAVDCT 156 (772)
T ss_dssp EEEESCEEEEEEEEEEESCS
T ss_pred EEEEeeceEEEEeEEEEeCC
Confidence 66778899999999998764
No 23
>3grh_A YBHC, acyl-COA thioester hydrolase YBGC; beta-helix, periplasmic, lipoprotein, outer membrane, carbohydrate esterase family 8; 1.70A {Escherichia coli k-12}
Probab=73.68 E-value=21 Score=29.94 Aligned_cols=40 Identities=13% Similarity=0.218 Sum_probs=26.2
Q ss_pred hHHHhhhc-----CCCeEEEEeeeeEEEeCeeeeec---CCeEEEeecCc
Q 045906 47 SLREGCRM-----KEPLWIVFEVSGTIHLRSHLSVS---SYKTIDGRGQR 88 (125)
Q Consensus 47 sLr~a~~~-----~~p~iIvf~vsGtI~l~~~l~V~---snkTI~G~g~~ 88 (125)
++.+||.. +..+.++|=..|+.+ +.|.|. .|+||+|.|.+
T Consensus 91 TIqeAVdaap~~~~~~r~vI~Ik~GvY~--E~V~Ip~~K~~ItL~G~G~~ 138 (422)
T 3grh_A 91 TIQAAVDAAIIKRTNKRQYIAVMPGEYQ--GTVYVPAAPGGITLYGTGEK 138 (422)
T ss_dssp SHHHHHHHHHTTCCSSCEEEEECSEEEE--SCEEECCCSSCEEEEECSSS
T ss_pred CHHHHHHhchhcCCCccEEEEEeCCeEe--eeEEecCCCCcEEEEeccCC
Confidence 67788763 223444443578875 457774 78999998763
No 24
>2inu_A Insulin fructotransferase; right-handed parallel beta-helix, lyase; 1.80A {Bacillus SP} PDB: 2inv_A*
Probab=73.47 E-value=5.5 Score=33.44 Aligned_cols=56 Identities=21% Similarity=0.361 Sum_probs=38.8
Q ss_pred eEEEEeeeeEEEeCeeeeec-CCeEEEeecCceE---Ee------c------Cc--EEEecc-----------------C
Q 045906 58 LWIVFEVSGTIHLRSHLSVS-SYKTIDGRGQRVK---LT------G------KG--LRLKEC-----------------E 102 (125)
Q Consensus 58 ~iIvf~vsGtI~l~~~l~V~-snkTI~G~g~~~~---i~------G------~g--l~i~~~-----------------~ 102 (125)
-+|++ -.|...|...+.|. ++.||.|.+.+.+ |. | .| +++..+ +
T Consensus 58 dvI~L-~~G~Y~l~g~ivIdkp~LtL~G~~~g~~s~~Id~~~~~~g~~~~~g~Gs~I~V~a~~~~g~a~~V~~~g~~r~s 136 (410)
T 2inu_A 58 AAIII-PPGDYDLHTQVVVDVSYLTIAGFGHGFFSRSILDNSNPTGWQNLQPGASHIRVLTSPSAPQAFLVKRAGDPRLS 136 (410)
T ss_dssp EEEEC-CSEEEEECSCEEECCTTEEEECSCCCCCCHHHHHTSCCTTCSCCSCCSEEEEECCCTTSCEEEEECCCSSSCEE
T ss_pred CEEEE-CCCeeccCCcEEEecCcEEEEecCCCcceeEEecccccCcccccCCCCcEEEEeccccccceeEEeeccCcccC
Confidence 34542 47999988899996 5599999875544 66 2 22 455443 7
Q ss_pred cEEEeeeEEecC
Q 045906 103 HVIICNLEFECG 114 (125)
Q Consensus 103 NVIIrNL~i~~~ 114 (125)
+|.|++|.|++.
T Consensus 137 ~V~~~~v~I~G~ 148 (410)
T 2inu_A 137 GIVFRDFCLDGV 148 (410)
T ss_dssp CCEEESCEEECC
T ss_pred CcEECCEEEECC
Confidence 888888888766
No 25
>2pyg_A Poly(beta-D-mannuronate) C5 epimerase 4; beta-helix, isomerase; 2.10A {Azotobacter vinelandii} PDB: 2pyh_A*
Probab=73.36 E-value=20 Score=27.98 Aligned_cols=39 Identities=10% Similarity=0.127 Sum_probs=22.4
Q ss_pred HHHhhhc---CCCeEEEEeeeeEEEeCe-------eeeecCCeEEEeecC
Q 045906 48 LREGCRM---KEPLWIVFEVSGTIHLRS-------HLSVSSYKTIDGRGQ 87 (125)
Q Consensus 48 Lr~a~~~---~~p~iIvf~vsGtI~l~~-------~l~V~snkTI~G~g~ 87 (125)
|.+|+.. .++.+|+| =.|+..++. .|.+.||++|.|.|.
T Consensus 22 iq~Ai~~a~~~gg~~v~~-p~G~y~~~~~~~~~~g~l~~~~~v~l~g~g~ 70 (377)
T 2pyg_A 22 IQAAIDAAYAAGGGTVYL-PAGEYRVSAAGEPGDGCLMLKDGVYLAGAGM 70 (377)
T ss_dssp HHHHHHHHHHTTSEEEEE-CSEEEEECCCSSGGGCSEECCTTEEEEESSB
T ss_pred HHHHHHHHHhcCCCEEEE-CCeEEEEcccccCCcccEEecCCeEEEEcCC
Confidence 6666543 23455554 256666543 566677777777653
No 26
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=72.92 E-value=3.6 Score=32.76 Aligned_cols=28 Identities=14% Similarity=0.430 Sum_probs=13.3
Q ss_pred EEEeccCcEEEeeeEEecCC-----CCCCCeeee
Q 045906 96 LRLKECEHVIICNLEFECGK-----GPDADAIQI 124 (125)
Q Consensus 96 l~i~~~~NVIIrNL~i~~~~-----~~~~DaI~I 124 (125)
+.+. ++||.|+|++|.... +++.|+|.+
T Consensus 126 i~i~-~~nv~i~~~~I~~~~~d~~~~~ntDGidi 158 (336)
T 1nhc_A 126 ISVQ-ATNVHLNDFTIDNSDGDDNGGHNTDGFDI 158 (336)
T ss_dssp EEEE-EEEEEEESCEEECTTHHHHTCCSCCSEEE
T ss_pred EEEE-eCCEEEEEEEEECCCcccccCCCCCcEEe
Confidence 3344 455555555555431 234565544
No 27
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=72.79 E-value=4 Score=34.06 Aligned_cols=28 Identities=29% Similarity=0.648 Sum_probs=21.1
Q ss_pred CcEEEeccCcEEEeeeEEecCCCCCCCeeeeC
Q 045906 94 KGLRLKECEHVIICNLEFECGKGPDADAIQIK 125 (125)
Q Consensus 94 ~gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I~ 125 (125)
.|+.+..++||.|+|..|+.+ .|||.||
T Consensus 239 DGidi~~s~nV~I~n~~i~~g----DDcIaik 266 (448)
T 3jur_A 239 DGIDPESCKYMLIEKCRFDTG----DDSVVIK 266 (448)
T ss_dssp CSBCCBSCEEEEEESCEEEES----SEEEEEB
T ss_pred ccccccCCcCEEEEeeEEEeC----CCcEEec
Confidence 467777788888888888864 4777765
No 28
>1ia5_A Polygalacturonase; glycosylhydrolase, hydrolase; HET: MAN NAG; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3 PDB: 1ib4_A*
Probab=71.38 E-value=3.1 Score=33.19 Aligned_cols=29 Identities=10% Similarity=0.155 Sum_probs=23.6
Q ss_pred cCcEEEeccCcEEEeeeEEecCCCCCCCeeeeC
Q 045906 93 GKGLRLKECEHVIICNLEFECGKGPDADAIQIK 125 (125)
Q Consensus 93 G~gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I~ 125 (125)
..|+.+..++||.|+|-.|+.+ .|||.||
T Consensus 158 tDGid~~~s~nV~I~n~~i~~g----DDcIaik 186 (339)
T 1ia5_A 158 TDAFDIGTSTYVTISGATVYNQ----DDCVAVN 186 (339)
T ss_dssp CCSEEEESCEEEEEESCEEECS----SCSEEES
T ss_pred CCcEEecCCceEEEEeeEEEcC----CCeEEEe
Confidence 4568888899999999999864 4888875
No 29
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=71.08 E-value=3.5 Score=33.96 Aligned_cols=30 Identities=17% Similarity=0.395 Sum_probs=16.7
Q ss_pred cEEEeccCcEEEeeeEEecCCCCCCCeeee
Q 045906 95 GLRLKECEHVIICNLEFECGKGPDADAIQI 124 (125)
Q Consensus 95 gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I 124 (125)
++.+..++||.|+|++|+.....+.|+|.+
T Consensus 152 ~i~i~~~~nv~I~n~~I~~~d~~ntDGidi 181 (422)
T 1rmg_A 152 HFTMDTCSDGEVYNMAIRGGNEGGLDGIDV 181 (422)
T ss_dssp SEEEEEEEEEEEEEEEEECCSSTTCCSEEE
T ss_pred EEEEeCcCCEEEEeEEEECCCCCCCccEee
Confidence 345555666666666666533234566543
No 30
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=70.24 E-value=4.1 Score=32.67 Aligned_cols=29 Identities=17% Similarity=0.332 Sum_probs=20.1
Q ss_pred cCcEEEeccCcEEEeeeEEecCCCCCCCeeeeC
Q 045906 93 GKGLRLKECEHVIICNLEFECGKGPDADAIQIK 125 (125)
Q Consensus 93 G~gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I~ 125 (125)
..|+.+..++||.|+|-.|+.. .|||.||
T Consensus 166 tDGid~~~s~nV~I~n~~i~~g----DDcIaik 194 (349)
T 1hg8_A 166 TDGFDISSSDHVTLDNNHVYNQ----DDCVAVT 194 (349)
T ss_dssp CCSEEEESCEEEEEEEEEEECS----SCSEEES
T ss_pred CCeEEEccccEEEEEeeEEecC----CCeEEee
Confidence 3467777777788877777753 4777764
No 31
>2iq7_A Endopolygalacturonase; parallel beta helix, hydrolase; HET: NAG MAN PG4; 1.94A {Colletotrichum lupini}
Probab=70.14 E-value=3.5 Score=32.87 Aligned_cols=29 Identities=14% Similarity=0.218 Sum_probs=23.0
Q ss_pred cCcEEEeccCcEEEeeeEEecCCCCCCCeeeeC
Q 045906 93 GKGLRLKECEHVIICNLEFECGKGPDADAIQIK 125 (125)
Q Consensus 93 G~gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I~ 125 (125)
..|+.+..++||.|+|-.|+.. .|||.||
T Consensus 154 tDGid~~~s~nV~I~n~~i~~g----DDciaik 182 (339)
T 2iq7_A 154 TDAFDVGSSTGVYISGANVKNQ----DDCLAIN 182 (339)
T ss_dssp CCSEEEESCEEEEEESCEEECS----SCSEEES
T ss_pred CCcEEEcCcceEEEEecEEecC----CCEEEEc
Confidence 3468888889999999999864 5888775
No 32
>1nhc_A Polygalacturonase I; beta-helix, hydrolase; HET: MAN NAG BMA; 1.70A {Aspergillus niger} SCOP: b.80.1.3
Probab=69.55 E-value=3.3 Score=33.00 Aligned_cols=29 Identities=24% Similarity=0.354 Sum_probs=23.5
Q ss_pred cCcEEEeccCcEEEeeeEEecCCCCCCCeeeeC
Q 045906 93 GKGLRLKECEHVIICNLEFECGKGPDADAIQIK 125 (125)
Q Consensus 93 G~gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I~ 125 (125)
..|+.+..++||.|+|-.|+.. .|||.||
T Consensus 153 tDGidi~~s~nV~I~n~~i~~g----DDciaik 181 (336)
T 1nhc_A 153 TDGFDISESTGVYISGATVKNQ----DDCIAIN 181 (336)
T ss_dssp CCSEEECSCEEEEEESCEEESS----SEEEEES
T ss_pred CCcEEecCCCeEEEEeCEEEcC----CCEEEEe
Confidence 4568888889999999999865 5888875
No 33
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=67.51 E-value=3.9 Score=33.09 Aligned_cols=29 Identities=10% Similarity=0.413 Sum_probs=20.3
Q ss_pred cEEEeccCcEEEeeeEEecCC-----CCCCCeeee
Q 045906 95 GLRLKECEHVIICNLEFECGK-----GPDADAIQI 124 (125)
Q Consensus 95 gl~i~~~~NVIIrNL~i~~~~-----~~~~DaI~I 124 (125)
.+.+. ++||.|+|++|.... +++.|+|.+
T Consensus 151 ~i~i~-~~nv~i~~~~I~~~~~d~~~~~NtDGidi 184 (362)
T 1czf_A 151 AFSVQ-ANDITFTDVTINNADGDTQGGHNTDAFDV 184 (362)
T ss_dssp CEEEE-CSSEEEESCEEECGGGGTTTCCSCCSEEE
T ss_pred EEEEe-eCCEEEEEEEEECCccccccCCCCCceee
Confidence 46777 899999999998631 345666654
No 34
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=66.04 E-value=18 Score=32.57 Aligned_cols=66 Identities=17% Similarity=0.250 Sum_probs=48.9
Q ss_pred chHHHhhhc-CCCeEEEEeeeeEEEeCeeeeecCCeEEEeecCceEEecCc------------EEE---eccCcEEEeee
Q 045906 46 GSLREGCRM-KEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQRVKLTGKG------------LRL---KECEHVIICNL 109 (125)
Q Consensus 46 GsLr~a~~~-~~p~iIvf~vsGtI~l~~~l~V~snkTI~G~g~~~~i~G~g------------l~i---~~~~NVIIrNL 109 (125)
-.|.+|+.. ...++++|. .|+..+++.|.|++++.|.|++- .+|.+.| +++ ...-.|.|+.|
T Consensus 418 ~Ai~~al~aa~~g~~v~~P-~G~Y~vt~Ti~ip~~~~ivG~~~-~~I~~~G~~F~d~~~P~pvv~VG~~gd~G~veisdl 495 (758)
T 3eqn_A 418 QAIKNVFAKYAGCKIIFFD-AGTYIVTDTIQIPAGTQIVGEVW-SVIMGTGSKFTDYNNPQPVIQVGAPGSSGVVEITDM 495 (758)
T ss_dssp HHHHHHHHHHTTTSEEECC-SEEEEESSCEEECTTCEEECCSS-EEEEECSGGGCCTTSCEEEEEESCTTCBSCEEEESC
T ss_pred HHHHHHHHHhcCCCEEEEC-CCEeEECCeEEcCCCCEEEeccc-ceEecCCccccCCCCCeeeEEeCCCCCCCeEEEEeE
Confidence 347777663 345677764 78999999999999999999965 5666543 566 23568999999
Q ss_pred EEec
Q 045906 110 EFEC 113 (125)
Q Consensus 110 ~i~~ 113 (125)
.|.-
T Consensus 496 ~~~t 499 (758)
T 3eqn_A 496 IFTT 499 (758)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 9983
No 35
>1h80_A IOTA-carrageenase; hydrolase, IOTA-carrageenan double helix degradation; 1.6A {Alteromonas SP} SCOP: b.80.1.8 PDB: 1ktw_A* 3lmw_A
Probab=65.71 E-value=5.9 Score=33.41 Aligned_cols=37 Identities=16% Similarity=0.240 Sum_probs=24.1
Q ss_pred CCeEEEeecCceEEecCc--------EEEeccCcEEEeeeEEecC
Q 045906 78 SYKTIDGRGQRVKLTGKG--------LRLKECEHVIICNLEFECG 114 (125)
Q Consensus 78 snkTI~G~g~~~~i~G~g--------l~i~~~~NVIIrNL~i~~~ 114 (125)
.|.+|.|.|....+.|.| |.+.+++|+.|+||+|.+.
T Consensus 109 ~nItI~G~Gg~~~iDG~G~~~~rp~~i~~~~~~Nv~I~gIti~n~ 153 (464)
T 1h80_A 109 RNFSFQGLGNGFLVDFKDSRDKNLAVFKLGDVRNYKISNFTIDDN 153 (464)
T ss_dssp EEEEEEECTTCEEEECTTCSCCBEEEEEECSEEEEEEEEEEEECC
T ss_pred cceEEECcCcceEEeCCCCCCCCceEEEEEeeccEEEeeeEEecc
Confidence 445666654333455432 5667889999999999763
No 36
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=64.06 E-value=5.6 Score=34.33 Aligned_cols=26 Identities=27% Similarity=0.592 Sum_probs=14.7
Q ss_pred cEEEeccCcEEEeeeEEecCCCCCCCeeee
Q 045906 95 GLRLKECEHVIICNLEFECGKGPDADAIQI 124 (125)
Q Consensus 95 gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I 124 (125)
|+.+..++||.|+|..|+.+ .|||.|
T Consensus 382 Gidi~~s~nV~I~n~~i~~g----DD~Iai 407 (608)
T 2uvf_A 382 GIEFGNSQNVMVFNNFFDTG----DDCINF 407 (608)
T ss_dssp SEEEESCEEEEEESCEEECS----SCSEEE
T ss_pred eEEecCCceEEEEeeEEecC----CceEEe
Confidence 55565566666666666542 355554
No 37
>1rmg_A Rgase A, rhamnogalacturonase A; hydrolase, inverting, parallel beta-helix, glycosidase; HET: NAG BMA MAN GLC; 2.00A {Aspergillus aculeatus} SCOP: b.80.1.3
Probab=61.76 E-value=5.5 Score=32.82 Aligned_cols=28 Identities=11% Similarity=0.290 Sum_probs=22.6
Q ss_pred cCcEEEeccCcEEEeeeEEecCCCCCCCeeeeC
Q 045906 93 GKGLRLKECEHVIICNLEFECGKGPDADAIQIK 125 (125)
Q Consensus 93 G~gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I~ 125 (125)
..|+.+.. +||.|+|-.|+.+ .|||.||
T Consensus 176 tDGidi~~-~nV~I~n~~i~~g----DD~Iai~ 203 (422)
T 1rmg_A 176 LDGIDVWG-SNIWVHDVEVTNK----DECVTVK 203 (422)
T ss_dssp CCSEEEEE-EEEEEEEEEEESS----SEEEEEE
T ss_pred CccEeecC-CeEEEEeeEEeCC----CCeEEeC
Confidence 45788887 9999999999865 4888874
No 38
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=61.57 E-value=6 Score=31.62 Aligned_cols=26 Identities=27% Similarity=0.372 Sum_probs=12.4
Q ss_pred cEEEeccCcEEEeeeEEecCCCCCCCeeeeC
Q 045906 95 GLRLKECEHVIICNLEFECGKGPDADAIQIK 125 (125)
Q Consensus 95 gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I~ 125 (125)
|+.+ .++||.|+|-.|+.. .|||.||
T Consensus 154 Gidi-~s~nV~I~n~~i~~g----DDcIaik 179 (335)
T 1k5c_A 154 GFDV-SANNVTIQNCIVKNQ----DDCIAIN 179 (335)
T ss_dssp SEEE-ECSSEEEESCEEESS----SCSEEEE
T ss_pred eEcc-cCCeEEEEeeEEEcC----CCEEEee
Confidence 3444 445555555555432 3555543
No 39
>1bhe_A PEHA, polygalacturonase; family 28 glycosyl hydrolase, hydrolyses polygalacturonic acid, glycosidase; 1.90A {Pectobacterium carotovorum subsp} SCOP: b.80.1.3
Probab=61.06 E-value=8.6 Score=30.84 Aligned_cols=29 Identities=7% Similarity=0.130 Sum_probs=17.3
Q ss_pred EEEeccCcEEEeeeEEecCC-CCCCCeeee
Q 045906 96 LRLKECEHVIICNLEFECGK-GPDADAIQI 124 (125)
Q Consensus 96 l~i~~~~NVIIrNL~i~~~~-~~~~DaI~I 124 (125)
+.+..++||.|+|++|+... .++.|+|.+
T Consensus 177 i~~~~~~~v~i~~v~I~~~~~~~NtDGid~ 206 (376)
T 1bhe_A 177 VVFSDGDGFTAWKTTIKTPSTARNTDGIDP 206 (376)
T ss_dssp EEEESCEEEEEEEEEEECCTTCSSCCSEEE
T ss_pred EEEeCCCcEEEEeEEEECCCCCCCCceEee
Confidence 34445667777777776542 246787765
No 40
>1hg8_A Endopolygalacturonase; hydrolase, pectin degradation; HET: NAG; 1.73A {Fusarium moniliforme} SCOP: b.80.1.3
Probab=55.88 E-value=8.9 Score=30.67 Aligned_cols=29 Identities=14% Similarity=0.313 Sum_probs=20.9
Q ss_pred EEEeccCcEEEeeeEEecCC-------------CCCCCeeee
Q 045906 96 LRLKECEHVIICNLEFECGK-------------GPDADAIQI 124 (125)
Q Consensus 96 l~i~~~~NVIIrNL~i~~~~-------------~~~~DaI~I 124 (125)
+.+..++||.|+|++|.... +++.|+|.+
T Consensus 130 i~i~~~~nv~i~~~~I~~~~~~~~~~~~~~~~~~~NtDGid~ 171 (349)
T 1hg8_A 130 FDITGSSQLTISGLILDNRAGDKPNAKSGSLPAAHNTDGFDI 171 (349)
T ss_dssp EEEESCEEEEEEEEEEECGGGSSCCTTTTTSCSCCSCCSEEE
T ss_pred EEEeccCCEEEEEEEEECCCCccccccccccccCCCCCeEEE
Confidence 55667889999999998531 346788765
No 41
>2uvf_A Exopolygalacturonase; GH28, pectin, cell WALL, hydrolase, periplasm, beta-helix, glycosidase, EXO-activity; HET: AD0; 2.1A {Yersinia enterocolitica} PDB: 2uve_A*
Probab=55.86 E-value=7.2 Score=33.64 Aligned_cols=30 Identities=20% Similarity=0.262 Sum_probs=21.4
Q ss_pred cEEEeccCcEEEeeeEEecCCCCCCCeeee
Q 045906 95 GLRLKECEHVIICNLEFECGKGPDADAIQI 124 (125)
Q Consensus 95 gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I 124 (125)
++.+..++||.|+|+++.+...++.|+|.+
T Consensus 356 ~i~~~~~~nv~i~~v~i~~~~~~NtDGidi 385 (608)
T 2uvf_A 356 GIMNLENHNVVANGLIHQTYDANNGDGIEF 385 (608)
T ss_dssp SEEEESCEEEEEESCEEECTTCTTCCSEEE
T ss_pred EEEEecCCCEEEeeEEEcCCCCCCCCeEEe
Confidence 355667788888888887655556787765
No 42
>1pxz_A Major pollen allergen JUN A 1; parallel beta-helix, cedar pollen; 1.70A {Juniperus ashei} SCOP: b.80.1.1
Probab=54.17 E-value=35 Score=27.40 Aligned_cols=23 Identities=9% Similarity=0.180 Sum_probs=20.0
Q ss_pred cCcEEEeccCcEEEeeeEEecCC
Q 045906 93 GKGLRLKECEHVIICNLEFECGK 115 (125)
Q Consensus 93 G~gl~i~~~~NVIIrNL~i~~~~ 115 (125)
+.+|.+.+++||+|.|.+|+...
T Consensus 150 ~DaI~i~~s~nVwIDHcs~s~~~ 172 (346)
T 1pxz_A 150 GDAITMRNVTNAWIDHNSLSDCS 172 (346)
T ss_dssp CCSEEEESCEEEEEESCEEECCS
T ss_pred CCEEEEecCceEEEEeeEEecCC
Confidence 56799999999999999999763
No 43
>1czf_A Polygalacturonase II; beta helix, hydrolase; HET: NAG; 1.68A {Aspergillus niger} SCOP: b.80.1.3
Probab=53.71 E-value=11 Score=30.27 Aligned_cols=21 Identities=10% Similarity=0.004 Sum_probs=15.8
Q ss_pred EEEeccCcEEEeeeEEecCCC
Q 045906 96 LRLKECEHVIICNLEFECGKG 116 (125)
Q Consensus 96 l~i~~~~NVIIrNL~i~~~~~ 116 (125)
|.+.+++|+.|+||++++.+.
T Consensus 129 i~~~~~~nv~i~~iti~nsp~ 149 (362)
T 1czf_A 129 FYAHGLDSSSITGLNIKNTPL 149 (362)
T ss_dssp EEEEEEETEEEESCEEECCSS
T ss_pred EEEeecccEEEEEEEEecCCc
Confidence 667778888888888887643
No 44
>3jur_A EXO-poly-alpha-D-galacturonosidase; beta-helix, cell WALL biogenesis/degradation, glycosidase; 2.05A {Thermotoga maritima}
Probab=47.97 E-value=11 Score=31.44 Aligned_cols=27 Identities=37% Similarity=0.518 Sum_probs=13.6
Q ss_pred EEeccCcEEEeeeEEecCCCCCCCeeee
Q 045906 97 RLKECEHVIICNLEFECGKGPDADAIQI 124 (125)
Q Consensus 97 ~i~~~~NVIIrNL~i~~~~~~~~DaI~I 124 (125)
.+..++||.|+||+|... +++.|+|.|
T Consensus 217 ~~~~~~nv~i~~v~I~~~-~~NtDGidi 243 (448)
T 3jur_A 217 HPVLSENVIIRNIEISST-GPNNDGIDP 243 (448)
T ss_dssp EEESCEEEEEESCEEEEC-STTCCSBCC
T ss_pred eeeccCCEEEEeEEEeec-cCCCccccc
Confidence 334455555555555543 234566543
No 45
>1k5c_A Endopolygalacturonase; beta helical structure, glycoside hydrolase, silver-LEAF IND substance, hydrolase; HET: NAG; 0.96A {Chondrostereum purpureum} SCOP: b.80.1.3 PDB: 1kcc_A* 1kcd_A*
Probab=47.92 E-value=11 Score=30.02 Aligned_cols=29 Identities=7% Similarity=0.239 Sum_probs=21.4
Q ss_pred EEEeccCc-EEEeeeEEecCC------CCCCCeeee
Q 045906 96 LRLKECEH-VIICNLEFECGK------GPDADAIQI 124 (125)
Q Consensus 96 l~i~~~~N-VIIrNL~i~~~~------~~~~DaI~I 124 (125)
+.+..++| |.|+|++|+... +++.|+|.+
T Consensus 122 i~i~~~~n~v~i~~v~I~~~~~d~~~~~~NtDGidi 157 (335)
T 1k5c_A 122 ISVGPTDAHLTLDGITVDDFAGDTKNLGHNTDGFDV 157 (335)
T ss_dssp EEEEEEEEEEEEESCEEECGGGGGGGCCCSCCSEEE
T ss_pred EEEEccCCeEEEEEEEEECCCCcccccCCCCCeEcc
Confidence 55567888 999999998752 456788754
No 46
>1ep7_A Thioredoxin CH1, H-type; electron transport; 2.10A {Chlamydomonas reinhardtii} SCOP: c.47.1.1 PDB: 1tof_A 1ep8_A
Probab=39.53 E-value=14 Score=22.86 Aligned_cols=27 Identities=15% Similarity=0.256 Sum_probs=20.6
Q ss_pred CcceEEEcCCCCCCCchHHHhhhc----CCCeEEEE
Q 045906 31 HGPLYHVTTLADDGPGSLREGCRM----KEPLWIVF 62 (125)
Q Consensus 31 gg~~~~Vtt~~d~g~GsLr~a~~~----~~p~iIvf 62 (125)
|+.++.+++.++ |.+++.. ..|.+|.|
T Consensus 1 g~~v~~i~~~~~-----~~~~l~~~~~~~~~~vv~f 31 (112)
T 1ep7_A 1 GGSVIVIDSKAA-----WDAQLAKGKEEHKPIVVDF 31 (112)
T ss_dssp CCSEEEECSHHH-----HHHHHHHHHHHTCCEEEEE
T ss_pred CCcEEEecCHHH-----HHHHHHhhcccCCeEEEEE
Confidence 467888888888 9998875 66666665
No 47
>1ti3_A Thioredoxin H, PTTRXH1; oxidoreductase; NMR {Populus tremula} SCOP: c.47.1.1
Probab=38.04 E-value=14 Score=22.79 Aligned_cols=29 Identities=14% Similarity=0.217 Sum_probs=21.0
Q ss_pred CCCcceEEEcCCCCCCCchHHHhhhc----CCCeEEEE
Q 045906 29 GLHGPLYHVTTLADDGPGSLREGCRM----KEPLWIVF 62 (125)
Q Consensus 29 G~gg~~~~Vtt~~d~g~GsLr~a~~~----~~p~iIvf 62 (125)
|.+|.++.+++.++ |.+.+.. ..|.+|.|
T Consensus 1 ~~~~~v~~i~~~~~-----~~~~~~~~~~~~~~~vv~f 33 (113)
T 1ti3_A 1 AEEGQVIACHTVDT-----WKEHFEKGKGSQKLIVVDF 33 (113)
T ss_dssp CCCCCEEEECSHHH-----HHHHHHHHTTSSSEEEEEE
T ss_pred CCCCceeEeccHHH-----HHHHHHHhhhcCCeEEEEE
Confidence 35678999999988 9988875 44444444
No 48
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=33.91 E-value=56 Score=28.19 Aligned_cols=29 Identities=10% Similarity=0.022 Sum_probs=18.9
Q ss_pred EEEeccCcE--EEeeeEEecCCCCCCCeeee
Q 045906 96 LRLKECEHV--IICNLEFECGKGPDADAIQI 124 (125)
Q Consensus 96 l~i~~~~NV--IIrNL~i~~~~~~~~DaI~I 124 (125)
+.+..++|| .|+|+++.....+..|+|.+
T Consensus 350 i~~~~c~nV~~~I~nv~i~~~~~~nTDGIDi 380 (574)
T 1ogo_X 350 MDFNGNSGISSQISDYKQVGAFFFQTDGPEI 380 (574)
T ss_dssp EEECSSSCEEEEEEEEEEECCCSTTCCCCBC
T ss_pred EeecCCCChhhEEEeeEeeCCCCCCCccCcc
Confidence 345578888 88888876543334666654
No 49
>1x0c_A Isopullulanase; glycoside hydrolase family 49, glycoprotein, hydro; HET: NAG; 1.70A {Aspergillus niger} PDB: 1wmr_A* 2z8g_A*
Probab=27.38 E-value=26 Score=29.98 Aligned_cols=10 Identities=0% Similarity=-0.183 Sum_probs=5.9
Q ss_pred EEEeeeEEec
Q 045906 104 VIICNLEFEC 113 (125)
Q Consensus 104 VIIrNL~i~~ 113 (125)
|.|+|+++..
T Consensus 322 V~I~n~~i~~ 331 (549)
T 1x0c_A 322 CRVDDYKQVG 331 (549)
T ss_dssp EEEEEEEEEC
T ss_pred EEEEeeEeEc
Confidence 6666666543
No 50
>2x3h_A K5 lyase, K5A lyase; bacteriophage, glycosaminoglycan; 1.60A {Enterobacteria phage k1-5}
Probab=26.47 E-value=29 Score=28.95 Aligned_cols=39 Identities=21% Similarity=0.301 Sum_probs=27.2
Q ss_pred CCeEEEeecCceEEecCcEEEeccCcEEEeeeEEecCCC
Q 045906 78 SYKTIDGRGQRVKLTGKGLRLKECEHVIICNLEFECGKG 116 (125)
Q Consensus 78 snkTI~G~g~~~~i~G~gl~i~~~~NVIIrNL~i~~~~~ 116 (125)
||.||.|.-+.-+..|.-+.+.+.++|-++|++|.+.++
T Consensus 142 s~~ti~~nk~~ds~qg~qvs~~gg~dvsv~~i~fsn~~g 180 (542)
T 2x3h_A 142 SNITVESNKATDTTQGQQVSLAGGSDVTVSDVNFSNVKG 180 (542)
T ss_dssp EEEEEECCCSSTTCBCCSEEEESCEEEEEEEEEEEEECS
T ss_pred eeEEEecccCCccccceEEEecCCCcceEeeeeeeecCC
Confidence 667777654333445556666677899999999987663
No 51
>1qcx_A Pectin lyase B; beta-helix protein, plant cell WALL; 1.70A {Aspergillus niger} SCOP: b.80.1.2
Probab=26.26 E-value=69 Score=25.83 Aligned_cols=22 Identities=14% Similarity=0.191 Sum_probs=19.0
Q ss_pred cCcEEEeccCcEEEeeeEEecC
Q 045906 93 GKGLRLKECEHVIICNLEFECG 114 (125)
Q Consensus 93 G~gl~i~~~~NVIIrNL~i~~~ 114 (125)
+.++.+.+++||+|.|.+|+..
T Consensus 153 ~DaI~i~~s~nvwIDHcs~s~~ 174 (359)
T 1qcx_A 153 GDAITVDDSDLVWIDHVTTARI 174 (359)
T ss_dssp CCSEEEESCCCEEEESCEEEEE
T ss_pred CceeEecCCceEEEEeeEeecc
Confidence 4678888999999999999864
No 52
>1ogo_X Dextranase; hydrolase, dextran degradation, glycosidase; HET: BGC GLC; 1.65A {Penicillium minioluteum} SCOP: b.133.1.1 b.80.1.10 PDB: 1ogm_X*
Probab=26.24 E-value=27 Score=30.17 Aligned_cols=27 Identities=19% Similarity=0.348 Sum_probs=17.9
Q ss_pred cCcEEEeccCcEEEeeeEEecCCCCCCCeeeeC
Q 045906 93 GKGLRLKECEHVIICNLEFECGKGPDADAIQIK 125 (125)
Q Consensus 93 G~gl~i~~~~NVIIrNL~i~~~~~~~~DaI~I~ 125 (125)
..|+.+. +||.|+|-.|+.. .|||.||
T Consensus 375 TDGIDi~--~NV~I~nc~I~~g----DDcIaIk 401 (574)
T 1ogo_X 375 TDGPEIY--PNSVVHDVFWHVN----DDAIKIY 401 (574)
T ss_dssp CCCCBCC--TTCEEEEEEEEES----SCSEECC
T ss_pred CccCccc--CCEEEEeeEEECC----CCEEEEC
Confidence 3445554 7788888888765 3677765
No 53
>3eqn_A Glucan 1,3-beta-glucosidase; tandem beta-helix domains, glycosidase, hydrolase; HET: NAG BMA; 1.70A {Phanerochaete chrysosporium} PDB: 3eqo_A*
Probab=25.65 E-value=2e+02 Score=25.94 Aligned_cols=40 Identities=20% Similarity=0.340 Sum_probs=30.0
Q ss_pred hHHHhhhc------------CCCeEEEEeeeeEEEeCeeeeecCCeEEEeecC
Q 045906 47 SLREGCRM------------KEPLWIVFEVSGTIHLRSHLSVSSYKTIDGRGQ 87 (125)
Q Consensus 47 sLr~a~~~------------~~p~iIvf~vsGtI~l~~~l~V~snkTI~G~g~ 87 (125)
.|.+|+.. ..|.+|+|- .|+..+++.|.+.+|+.|+|.+.
T Consensus 68 Aiq~Ai~~a~~~Gggc~~st~~~~~V~~P-~GtYlvs~tI~l~~~t~L~G~~~ 119 (758)
T 3eqn_A 68 AIQAAINAGGRCGQGCDSTTTQPALVYFP-PGTYKVSSPLVVLYQTQLIGDAK 119 (758)
T ss_dssp HHHHHHHTTSCSCTTCCCCSSSCEEEEEC-SSEEEESSCEECCTTEEEEECSS
T ss_pred HHHHHHHHhhhcccccccccccceEEEEC-CceEEEcccEEccCCeEEEecCC
Confidence 47777753 135677764 78888888899999999999864
No 54
>2x6w_A Tail spike protein; viral protein, beta-helix, hydrolase; HET: RAM GLC GLA NAG NDG; 1.35A {Enterobacteria phage HK620} PDB: 2vji_A 2vjj_A* 2x85_A* 2x6x_A* 2x6y_A*
Probab=24.92 E-value=41 Score=29.49 Aligned_cols=15 Identities=7% Similarity=0.049 Sum_probs=12.3
Q ss_pred EEE---eccCcEEEeeeE
Q 045906 96 LRL---KECEHVIICNLE 110 (125)
Q Consensus 96 l~i---~~~~NVIIrNL~ 110 (125)
+.+ ..++||.|+||+
T Consensus 201 I~iG~~~~c~NVtI~nvt 218 (600)
T 2x6w_A 201 ITLGWNGYGSNCYVRKCR 218 (600)
T ss_dssp EEECBTTBEEEEEEESCE
T ss_pred EEeCCCCCcccEEEeCeE
Confidence 456 668899999999
No 55
>3zsc_A Pectate trisaccharide-lyase; hydrolase; HET: ADA AQA; 1.94A {Thermotoga maritima}
Probab=21.39 E-value=87 Score=25.25 Aligned_cols=23 Identities=17% Similarity=0.313 Sum_probs=19.6
Q ss_pred cCcEEEeccCcEEEeeeEEecCC
Q 045906 93 GKGLRLKECEHVIICNLEFECGK 115 (125)
Q Consensus 93 G~gl~i~~~~NVIIrNL~i~~~~ 115 (125)
+.+|.+.+++||+|-|..|+...
T Consensus 116 ~DaI~i~~s~nVWIDHcs~s~~~ 138 (340)
T 3zsc_A 116 FDYINVENSHHIWIDHITFVNGN 138 (340)
T ss_dssp CCSEEEESCEEEEEESCEEESCS
T ss_pred CCeEEEecCCcEEEEeeeeccCC
Confidence 45688989999999999999764
No 56
>2j23_A Thioredoxin; immune protein, autoreactivity, cross-reactivity, IGE, fungi, epitope, allergen; 1.41A {Malassezia sympodialis}
Probab=21.36 E-value=45 Score=21.18 Aligned_cols=28 Identities=11% Similarity=0.162 Sum_probs=21.2
Q ss_pred CcceEEEcCCCCCCCchHHHhhhcCCCeEEEEe
Q 045906 31 HGPLYHVTTLADDGPGSLREGCRMKEPLWIVFE 63 (125)
Q Consensus 31 gg~~~~Vtt~~d~g~GsLr~a~~~~~p~iIvf~ 63 (125)
.+.+..+++.++ |.+++..+.|.+|.|-
T Consensus 14 ~~~~~~i~~~~~-----f~~~l~~~k~vvv~f~ 41 (121)
T 2j23_A 14 RGSVQVISSYDQ-----FKQVTGGDKVVVIDFW 41 (121)
T ss_dssp CCCEEECCSHHH-----HHHHHSSSSCEEEEEE
T ss_pred CcceEEcCCHHH-----HHHHHcCCCEEEEEEE
Confidence 457888888888 9999966666666653
No 57
>2vm1_A Thioredoxin, thioredoxin H isoform 1.; oxidoreductase, protein disulfide reductase, thioredoxin-FOL; 1.7A {Hordeum vulgare var} PDB: 2vm2_A
Probab=21.01 E-value=38 Score=20.82 Aligned_cols=28 Identities=14% Similarity=0.151 Sum_probs=20.6
Q ss_pred CcceEEEcCCCCCCCchHHHhhhc----CCCeEEEEe
Q 045906 31 HGPLYHVTTLADDGPGSLREGCRM----KEPLWIVFE 63 (125)
Q Consensus 31 gg~~~~Vtt~~d~g~GsLr~a~~~----~~p~iIvf~ 63 (125)
++.++.+++.++ |.+++.. ..|.+|.|-
T Consensus 5 ~~~v~~i~~~~~-----~~~~~~~~~~~~~~~vv~f~ 36 (118)
T 2vm1_A 5 EGAVIACHTKQE-----FDTHMANGKDTGKLVIIDFT 36 (118)
T ss_dssp CCCEEECCSHHH-----HHHHHHHHHHHTCCEEEEEE
T ss_pred CCceEEecCHHH-----HHHHHHhcccCCCEEEEEEE
Confidence 567888888888 9888875 566666653
Done!