Query 045909
Match_columns 268
No_of_seqs 182 out of 495
Neff 4.7
Searched_HMMs 29240
Date Mon Mar 25 11:35:21 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045909.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045909hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2wgk_A 3,6-diketocamphane 1,6 38.2 25 0.00086 32.1 3.9 29 239-267 337-371 (378)
2 1whs_A Serine carboxypeptidase 36.5 43 0.0015 29.8 5.0 46 217-266 122-167 (255)
3 3hss_A Putative bromoperoxidas 25.8 81 0.0028 25.3 4.6 39 214-263 91-129 (293)
4 1k1f_A Breakpoint cluster regi 25.4 53 0.0018 24.2 3.0 23 86-108 25-47 (72)
5 1ac5_A KEX1(delta)P; carboxype 25.1 87 0.003 30.0 5.3 44 217-265 145-189 (483)
6 3l80_A Putative uncharacterize 21.8 1E+02 0.0035 24.8 4.5 39 214-263 91-129 (292)
7 3ibt_A 1H-3-hydroxy-4-oxoquino 20.9 1.1E+02 0.0038 24.0 4.4 39 214-263 68-106 (264)
8 1b6g_A Haloalkane dehalogenase 20.6 53 0.0018 28.0 2.6 38 214-262 97-134 (310)
9 2yys_A Proline iminopeptidase- 20.4 94 0.0032 25.7 4.1 39 214-263 76-114 (286)
10 3qyj_A ALR0039 protein; alpha/ 20.1 77 0.0026 26.6 3.5 21 242-262 94-114 (291)
No 1
>2wgk_A 3,6-diketocamphane 1,6 monooxygenase; camphor pathway, oxidoreductase; 2.00A {Pseudomonas putida}
Probab=38.22 E-value=25 Score=32.12 Aligned_cols=29 Identities=17% Similarity=0.350 Sum_probs=22.8
Q ss_pred cCCCCceEEEccCCchh------hHHHHhhhhccC
Q 045909 239 RSNGADHFMVSCHDWVS------TYIYVLLNLLLP 267 (268)
Q Consensus 239 RS~GaDHF~VscHDwG~------~~~~~l~~~~~~ 267 (268)
+.+|.|||++.++|..+ .....+++.++|
T Consensus 337 ~~gG~d~~~l~~~~~~~~~~~~~~~l~~~a~~V~P 371 (378)
T 2wgk_A 337 ATGGWGTLQVEAHDYYDDPAPWFQSLELISKEVAP 371 (378)
T ss_dssp HHCCCSEEEEECCCCTTCHHHHHHHHHHHHHHTGG
T ss_pred hhCCCCEEEEcCCCCCCcHHHHHHHHHHHHhhccc
Confidence 34799999999887776 467777777777
No 2
>1whs_A Serine carboxypeptidase II; HET: NAG FUC; 2.00A {Triticum aestivum} SCOP: c.69.1.5 PDB: 1bcs_A* 1bcr_A* 1wht_A* 3sc2_A*
Probab=36.53 E-value=43 Score=29.77 Aligned_cols=46 Identities=13% Similarity=0.322 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHHHhhcCcccccCCCCceEEEccCCchhhHHHHhhhhcc
Q 045909 217 DRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLNLLL 266 (268)
Q Consensus 217 ~~L~~~l~dyV~~Ia~kyPyWNRS~GaDHF~VscHDwG~~~~~~l~~~~~ 266 (268)
+...+.+.++|+..-+++|-|+. .-|+++++.||-.....++..++
T Consensus 122 ~~~a~~~~~fl~~f~~~fp~~~~----~~~yi~GESYgG~yvp~la~~i~ 167 (255)
T 1whs_A 122 NRTAHDSYAFLAKWFERFPHYKY----RDFYIAGESYAGHYVPELSQLVH 167 (255)
T ss_dssp HHHHHHHHHHHHHHHHHCGGGTT----CEEEEEEEETHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhCHHhcC----CCEEEEecCCccccHHHHHHHHH
Confidence 44444555555554568988863 34999999999999888887653
No 3
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase, hydrolase; 1.90A {Mycobacterium tuberculosis} PDB: 3e3a_A 3hys_A 3hzo_A
Probab=25.79 E-value=81 Score=25.33 Aligned_cols=39 Identities=5% Similarity=-0.044 Sum_probs=27.7
Q ss_pred cchHHHHHHHHHHHHHHhhcCcccccCCCCceEEEccCCchhhHHHHhhh
Q 045909 214 YSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLN 263 (268)
Q Consensus 214 ~~~~~L~~~l~dyV~~Ia~kyPyWNRS~GaDHF~VscHDwG~~~~~~l~~ 263 (268)
++.+.+.+.+.+.++.+ |.+.+.+.+|++|...+..++.
T Consensus 91 ~~~~~~~~~~~~~l~~l-----------~~~~~~lvGhS~Gg~ia~~~a~ 129 (293)
T 3hss_A 91 FTTQTMVADTAALIETL-----------DIAPARVVGVSMGAFIAQELMV 129 (293)
T ss_dssp CCHHHHHHHHHHHHHHH-----------TCCSEEEEEETHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhc-----------CCCcEEEEeeCccHHHHHHHHH
Confidence 44555666666666644 5578999999999987766553
No 4
>1k1f_A Breakpoint cluster region protein; oligomerization, coiled coil, BCR-ABL kinase, transferase; 2.20A {Homo sapiens} SCOP: a.147.1.1
Probab=25.39 E-value=53 Score=24.19 Aligned_cols=23 Identities=26% Similarity=0.367 Sum_probs=19.6
Q ss_pred hhhhhhhHHHHHHHHHHHHHhhh
Q 045909 86 KARSIRVEEDLAQARAAIRKAIH 108 (268)
Q Consensus 86 ~s~lervE~~L~~Ara~I~~A~~ 108 (268)
..+++-+|++|.+.|++||+--.
T Consensus 25 l~~vgdiEqeLe~Ck~sIrrLE~ 47 (72)
T 1k1f_A 25 LRSVGDIEQELERAKASIRRLEQ 47 (72)
T ss_dssp CSSHHHHHHHHHHHHHHHHHHHH
T ss_pred HhhhhHHHHHHHHHHHHHHHHHH
Confidence 35689999999999999998654
No 5
>1ac5_A KEX1(delta)P; carboxypeptidase, hydrolase, glycoprotein, transmembrane; HET: NAG; 2.40A {Saccharomyces cerevisiae} SCOP: c.69.1.5
Probab=25.06 E-value=87 Score=29.96 Aligned_cols=44 Identities=14% Similarity=0.355 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHHHhhcCc-ccccCCCCceEEEccCCchhhHHHHhhhhc
Q 045909 217 DRLQRLLTDYVTVVADKYP-YWNRSNGADHFMVSCHDWVSTYIYVLLNLL 265 (268)
Q Consensus 217 ~~L~~~l~dyV~~Ia~kyP-yWNRS~GaDHF~VscHDwG~~~~~~l~~~~ 265 (268)
+...+.+..+|+..-.++| ||+ ..|+++++-||-.....++..+
T Consensus 145 ~~~a~~~~~fl~~~~~~fP~~~~-----~~~~i~GeSYgg~y~p~~a~~i 189 (483)
T 1ac5_A 145 EDVTKHFMDFLENYFKIFPEDLT-----RKIILSGESYAGQYIPFFANAI 189 (483)
T ss_dssp HHHHHHHHHHHHHHHHHCTTGGG-----SEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhChhhcC-----CCEEEEeccccccccHHHHHHH
Confidence 3444444445444445787 665 3599999999999888887655
No 6
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase fold, carboxylesterase, Ser- hydrolase; 2.00A {Streptococcus mutans}
Probab=21.78 E-value=1e+02 Score=24.84 Aligned_cols=39 Identities=5% Similarity=0.010 Sum_probs=26.9
Q ss_pred cchHHHHHHHHHHHHHHhhcCcccccCCCCceEEEccCCchhhHHHHhhh
Q 045909 214 YSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLN 263 (268)
Q Consensus 214 ~~~~~L~~~l~dyV~~Ia~kyPyWNRS~GaDHF~VscHDwG~~~~~~l~~ 263 (268)
++.+.+.+.+.++++.+ |.+.+.+.+|.||...+..++.
T Consensus 91 ~~~~~~~~~l~~~l~~~-----------~~~~~~lvGhS~Gg~ia~~~a~ 129 (292)
T 3l80_A 91 VGLRDWVNAILMIFEHF-----------KFQSYLLCVHSIGGFAALQIMN 129 (292)
T ss_dssp CCHHHHHHHHHHHHHHS-----------CCSEEEEEEETTHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHh-----------CCCCeEEEEEchhHHHHHHHHH
Confidence 44455556666666522 6678999999999987766653
No 7
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase; 2.60A {Pseudomonas putida}
Probab=20.87 E-value=1.1e+02 Score=24.04 Aligned_cols=39 Identities=10% Similarity=0.134 Sum_probs=26.6
Q ss_pred cchHHHHHHHHHHHHHHhhcCcccccCCCCceEEEccCCchhhHHHHhhh
Q 045909 214 YSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLN 263 (268)
Q Consensus 214 ~~~~~L~~~l~dyV~~Ia~kyPyWNRS~GaDHF~VscHDwG~~~~~~l~~ 263 (268)
++.+.+.+.+.++++.+ |.+.+.+.+|++|......++.
T Consensus 68 ~~~~~~~~~~~~~l~~l-----------~~~~~~lvGhS~Gg~ia~~~a~ 106 (264)
T 3ibt_A 68 FDSQTLAQDLLAFIDAK-----------GIRDFQMVSTSHGCWVNIDVCE 106 (264)
T ss_dssp CCHHHHHHHHHHHHHHT-----------TCCSEEEEEETTHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHHhc-----------CCCceEEEecchhHHHHHHHHH
Confidence 34455555666666532 5568999999999887776654
No 8
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A {Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A 1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A 2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Probab=20.58 E-value=53 Score=27.97 Aligned_cols=38 Identities=13% Similarity=0.229 Sum_probs=27.0
Q ss_pred cchHHHHHHHHHHHHHHhhcCcccccCCCCceEEEccCCchhhHHHHhh
Q 045909 214 YSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLL 262 (268)
Q Consensus 214 ~~~~~L~~~l~dyV~~Ia~kyPyWNRS~GaDHF~VscHDwG~~~~~~l~ 262 (268)
++.+.+.+.+.+.++.+ |.+.+.+.+|+||......++
T Consensus 97 y~~~~~a~dl~~ll~~l-----------~~~~~~lvGhS~Gg~va~~~A 134 (310)
T 1b6g_A 97 YTFEFHRNFLLALIERL-----------DLRNITLVVQDWGGFLGLTLP 134 (310)
T ss_dssp CCHHHHHHHHHHHHHHH-----------TCCSEEEEECTHHHHHHTTSG
T ss_pred cCHHHHHHHHHHHHHHc-----------CCCCEEEEEcChHHHHHHHHH
Confidence 45556666677777633 567899999999987766554
No 9
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural genomics, unknown function; 2.20A {Thermus thermophilus}
Probab=20.43 E-value=94 Score=25.75 Aligned_cols=39 Identities=15% Similarity=0.227 Sum_probs=26.2
Q ss_pred cchHHHHHHHHHHHHHHhhcCcccccCCCCceEEEccCCchhhHHHHhhh
Q 045909 214 YSRDRLQRLLTDYVTVVADKYPYWNRSNGADHFMVSCHDWVSTYIYVLLN 263 (268)
Q Consensus 214 ~~~~~L~~~l~dyV~~Ia~kyPyWNRS~GaDHF~VscHDwG~~~~~~l~~ 263 (268)
++.+.+.+.+.+.++.+ |.+.+.+.+|+||...+..++.
T Consensus 76 ~~~~~~a~dl~~ll~~l-----------~~~~~~lvGhS~Gg~ia~~~a~ 114 (286)
T 2yys_A 76 FTVDALVEDTLLLAEAL-----------GVERFGLLAHGFGAVVALEVLR 114 (286)
T ss_dssp CCHHHHHHHHHHHHHHT-----------TCCSEEEEEETTHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHh-----------CCCcEEEEEeCHHHHHHHHHHH
Confidence 34445555555566522 5678999999999887766553
No 10
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Probab=20.10 E-value=77 Score=26.64 Aligned_cols=21 Identities=29% Similarity=0.302 Sum_probs=17.3
Q ss_pred CCceEEEccCCchhhHHHHhh
Q 045909 242 GADHFMVSCHDWVSTYIYVLL 262 (268)
Q Consensus 242 GaDHF~VscHDwG~~~~~~l~ 262 (268)
|.+.+.+.+|+||......++
T Consensus 94 ~~~~~~l~GhS~Gg~ia~~~a 114 (291)
T 3qyj_A 94 GYEQFYVVGHDRGARVAHRLA 114 (291)
T ss_dssp TCSSEEEEEETHHHHHHHHHH
T ss_pred CCCCEEEEEEChHHHHHHHHH
Confidence 556799999999998877765
Done!