Query 045912
Match_columns 218
No_of_seqs 293 out of 1512
Neff 9.2
Searched_HMMs 29240
Date Mon Mar 25 11:38:05 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045912.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045912hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3io1_A Aminobenzoyl-glutamate 100.0 1.1E-41 3.8E-46 294.7 23.6 204 9-216 1-364 (445)
2 3ram_A HMRA protein; two-domai 100.0 1.8E-36 6.2E-41 258.3 24.0 187 9-213 3-302 (394)
3 1xmb_A IAA-amino acid hydrolas 100.0 1.8E-36 6.3E-41 260.1 21.6 201 9-215 13-335 (418)
4 1ysj_A Protein YXEP; M20 famil 100.0 2.3E-35 7.9E-40 252.2 21.5 194 18-215 28-340 (404)
5 3pfo_A Putative acetylornithin 100.0 1.3E-33 4.3E-38 243.2 20.8 208 5-215 9-368 (433)
6 3dlj_A Beta-Ala-His dipeptidas 100.0 1.7E-32 5.7E-37 239.6 23.5 208 5-216 8-420 (485)
7 3pfe_A Succinyl-diaminopimelat 100.0 1.7E-31 5.7E-36 232.5 20.7 201 11-216 6-406 (472)
8 3isz_A Succinyl-diaminopimelat 100.0 1.6E-30 5.3E-35 219.8 22.0 186 21-215 2-316 (377)
9 3rza_A Tripeptidase; phosphory 100.0 1.2E-30 4.1E-35 222.4 21.1 195 12-215 14-333 (396)
10 3gb0_A Peptidase T; NP_980509. 100.0 6E-30 2.1E-34 216.3 23.0 187 20-215 4-313 (373)
11 1cg2_A Carboxypeptidase G2; me 100.0 1.9E-30 6.5E-35 220.9 19.5 198 11-215 8-328 (393)
12 1vgy_A Succinyl-diaminopimelat 100.0 8.2E-30 2.8E-34 217.0 19.3 186 21-215 5-319 (393)
13 2zog_A Cytosolic non-specific 100.0 4.2E-29 1.4E-33 217.6 23.9 201 11-215 9-412 (479)
14 3ct9_A Acetylornithine deacety 100.0 5.4E-30 1.9E-34 215.5 17.4 180 16-210 5-300 (356)
15 3tx8_A Succinyl-diaminopimelat 100.0 2.2E-29 7.4E-34 212.6 15.3 179 20-207 11-308 (369)
16 2pok_A Peptidase, M20/M25/M40 100.0 1.4E-27 4.6E-32 208.3 21.7 199 10-215 31-418 (481)
17 2f7v_A Aectylcitrulline deacet 99.9 6.4E-28 2.2E-32 203.7 11.6 186 17-215 4-310 (369)
18 3ife_A Peptidase T; metallopep 99.9 7.9E-26 2.7E-30 194.8 19.9 192 18-215 23-372 (434)
19 1lfw_A PEPV; hydrolase, dipept 99.9 4E-25 1.4E-29 192.1 20.8 115 13-129 5-137 (470)
20 3khx_A Putative dipeptidase sa 99.9 1.7E-25 6E-30 195.5 16.8 122 4-128 16-155 (492)
21 2rb7_A Peptidase, M20/M25/M40 99.9 7.1E-26 2.4E-30 190.9 12.2 170 21-209 5-299 (364)
22 2qyv_A XAA-His dipeptidase; YP 99.9 1.5E-24 5E-29 189.4 18.4 104 20-124 9-129 (487)
23 1fno_A Peptidase T; metallo pe 99.9 2.4E-24 8.1E-29 184.6 17.1 186 23-215 3-346 (417)
24 3mru_A Aminoacyl-histidine dip 99.9 2.4E-24 8.1E-29 188.2 17.3 103 20-123 12-131 (490)
25 1z2l_A Allantoate amidohydrola 99.9 2E-22 6.7E-27 172.9 20.8 195 15-215 2-350 (423)
26 3n5f_A L-carbamoylase, N-carba 99.9 4.7E-22 1.6E-26 169.9 21.9 189 21-215 4-346 (408)
27 4h2k_A Succinyl-diaminopimelat 99.9 1.3E-22 4.6E-27 164.3 13.6 110 20-130 4-122 (269)
28 3t68_A Succinyl-diaminopimelat 99.9 2.4E-22 8.3E-27 162.6 9.6 109 21-130 5-122 (268)
29 2v8h_A Beta-alanine synthase; 99.9 8.9E-21 3E-25 165.0 18.0 189 19-213 29-382 (474)
30 1q7l_A Aminoacylase-1; catalys 99.9 2.9E-21 1E-25 149.6 12.1 110 21-130 9-132 (198)
31 2gre_A Deblocking aminopeptida 99.6 1.9E-14 6.4E-19 120.4 11.7 69 20-89 4-73 (349)
32 1vho_A Endoglucanase; structur 99.5 7.7E-14 2.6E-18 116.5 12.2 68 22-90 5-72 (346)
33 1vhe_A Aminopeptidase/glucanas 99.5 3.1E-13 1E-17 114.0 11.6 68 22-90 7-75 (373)
34 2wyr_A Cobalt-activated peptid 99.5 1.7E-13 6E-18 113.7 9.4 64 24-90 4-67 (332)
35 1tkj_A Aminopeptidase, SGAP; d 99.5 1.4E-13 4.9E-18 111.9 8.4 96 21-130 6-116 (284)
36 2fvg_A Endoglucanase; TM1049, 99.5 7.8E-14 2.7E-18 116.3 6.8 63 27-90 3-66 (340)
37 1ylo_A Hypothetical protein SF 99.4 4.7E-13 1.6E-17 111.7 10.5 64 26-90 7-70 (348)
38 2wzn_A TET3, 354AA long hypoth 99.4 2E-13 7E-18 111.9 7.9 66 25-92 12-78 (354)
39 1y0y_A FRV operon protein FRVX 99.3 2.9E-12 9.8E-17 107.3 7.9 65 24-90 8-73 (353)
40 3cpx_A Aminopeptidase, M42 fam 99.3 1.1E-12 3.8E-17 108.5 3.8 70 19-90 14-89 (321)
41 1rtq_A Bacterial leucyl aminop 99.3 2.4E-11 8.1E-16 99.5 10.3 101 21-130 19-136 (299)
42 3tc8_A Leucine aminopeptidase; 99.2 7.4E-11 2.5E-15 96.9 12.3 106 21-130 24-146 (309)
43 3gux_A Putative Zn-dependent e 99.2 5.3E-11 1.8E-15 98.0 10.4 106 21-130 26-148 (314)
44 3kl9_A PEPA, glutamyl aminopep 99.2 5.9E-11 2E-15 99.3 9.2 67 23-90 4-72 (355)
45 2vpu_A TET3, 354AA long hypoth 99.1 1.6E-10 5.5E-15 96.5 6.9 66 23-90 10-76 (354)
46 2afw_A Glutaminyl-peptide cycl 99.1 6.2E-10 2.1E-14 92.3 9.6 99 21-129 30-145 (329)
47 3isx_A Endoglucanase; TM1050, 99.0 1E-09 3.5E-14 91.2 8.7 66 23-90 12-77 (343)
48 4fuu_A Leucine aminopeptidase; 98.9 1.8E-08 6.2E-13 82.7 12.3 108 21-130 24-146 (309)
49 4fai_A CG5976, isoform B; alph 98.7 1.8E-07 6.1E-12 77.4 11.6 96 22-129 38-147 (330)
50 4f9u_A CG32412; alpha/beta hyd 98.6 2.8E-07 9.7E-12 75.6 11.5 86 34-129 22-121 (312)
51 3pb6_X Glutaminyl-peptide cycl 98.6 7.9E-08 2.7E-12 79.4 7.4 83 38-129 57-152 (330)
52 2ek8_A Aminopeptidase; metallo 97.3 0.00051 1.7E-08 58.5 7.2 83 33-130 163-259 (421)
53 3iib_A Peptidase M28; YP_92679 96.9 0.0018 6E-08 55.5 6.8 75 42-130 203-288 (444)
54 3fed_A Glutamate carboxypeptid 95.4 0.022 7.6E-07 51.5 5.9 48 66-129 313-362 (707)
55 3kas_A Transferrin receptor pr 95.1 0.03 1E-06 50.1 5.9 47 66-129 267-316 (640)
56 1y7e_A Probable M18-family ami 92.1 0.14 4.8E-06 43.9 4.4 51 38-90 32-100 (458)
57 2ijz_A Probable M18-family ami 90.9 0.057 2E-06 45.9 0.7 61 30-90 7-86 (428)
58 2glf_A Probable M18-family ami 90.4 0.64 2.2E-05 39.7 6.8 53 38-90 30-97 (450)
59 1lam_A Leucine aminopeptidase; 84.4 1.2 4.2E-05 38.2 5.0 184 21-214 160-395 (484)
60 2hc9_A Leucine aminopeptidase 84.1 7.3 0.00025 33.5 9.5 184 21-214 166-398 (491)
61 1gyt_A Cytosol aminopeptidase; 82.2 1.5 5.1E-05 38.0 4.6 184 21-214 180-415 (503)
62 2glj_A Probable M18-family ami 81.3 0.28 9.5E-06 42.1 -0.2 50 41-90 37-106 (461)
63 3kzw_A Cytosol aminopeptidase; 78.7 1.4 4.7E-05 38.1 3.2 184 21-214 196-429 (515)
64 3ij3_A Cytosol aminopeptidase; 78.4 1 3.5E-05 38.5 2.3 181 22-214 167-395 (482)
65 3h8g_F Cytosol aminopeptidase; 78.0 1.9 6.4E-05 37.2 3.9 184 21-214 179-412 (497)
66 3pei_A Cytosol aminopeptidase; 77.4 2.2 7.5E-05 36.7 4.1 184 21-214 163-396 (486)
67 3iib_A Peptidase M28; YP_92679 75.6 6.2 0.00021 33.4 6.5 56 6-61 3-65 (444)
68 3jru_B Probable cytosol aminop 75.2 14 0.00049 31.7 8.5 184 21-214 175-407 (490)
69 4efd_A Aminopeptidase; structu 74.5 1.7 5.7E-05 37.6 2.6 185 23-214 205-438 (522)
70 3fed_A Glutamate carboxypeptid 74.0 3 0.0001 37.7 4.3 51 9-61 14-67 (707)
71 3k9t_A Putative peptidase; str 65.3 18 0.00061 30.5 6.8 47 66-130 166-215 (435)
72 3kr4_A M17 leucyl aminopeptida 65.0 45 0.0015 28.9 9.4 175 22-214 205-439 (528)
73 2ek8_A Aminopeptidase; metallo 58.0 18 0.00061 30.2 5.8 40 22-61 16-57 (421)
74 3kz5_E Protein SOPB; partition 56.9 13 0.00045 21.2 3.2 27 141-167 21-47 (52)
75 2jvf_A De novo protein M7; tet 46.5 48 0.0016 20.3 7.3 30 141-170 15-44 (96)
76 3vat_A Dnpep, aspartyl aminope 42.5 99 0.0034 26.6 7.9 67 23-89 34-119 (496)
77 3kas_A Transferrin receptor pr 42.4 22 0.00074 31.7 3.9 47 10-58 8-59 (640)
78 2kkm_A Translation machinery-a 42.3 67 0.0023 22.6 5.8 57 2-59 44-102 (144)
79 4g29_A Secreted effector prote 42.2 77 0.0026 23.1 6.1 34 25-58 19-59 (186)
80 3mru_A Aminoacyl-histidine dip 41.1 36 0.0012 28.9 5.1 67 140-216 359-427 (490)
81 3lno_A Putative uncharacterize 38.6 44 0.0015 22.0 4.2 31 141-171 44-75 (108)
82 2dof_A Transcription elongatio 37.7 18 0.00062 23.1 2.0 27 18-44 17-43 (85)
83 4eme_A M18 aspartyl aminopepti 37.7 1.7E+02 0.0057 25.7 8.6 52 38-89 20-91 (571)
84 2kl8_A OR15; structural genomi 36.8 68 0.0023 19.2 4.3 36 146-183 2-37 (85)
85 4ds1_A Dynein light chain 1, c 35.8 68 0.0023 20.8 4.7 34 21-57 26-60 (97)
86 3ut4_A CTHE_2751, putative unc 35.3 1.1E+02 0.0038 21.2 6.7 52 4-55 72-128 (134)
87 3ak8_A DNA protection during s 34.9 1E+02 0.0034 21.9 6.0 49 2-54 106-154 (167)
88 3kew_A DHHA1 domain protein; s 34.5 98 0.0033 23.7 6.2 43 135-183 118-160 (241)
89 3twe_A Alpha4H; unknown functi 30.8 47 0.0016 15.5 3.6 22 11-32 4-25 (27)
90 1kaf_A Transcription regulator 30.1 59 0.002 21.6 3.6 32 42-73 8-40 (108)
91 3v4g_A Arginine repressor; vib 29.9 25 0.00087 25.8 2.0 35 20-59 30-64 (180)
92 3tuf_A Stage III sporulation p 29.7 1.7E+02 0.0059 21.7 7.0 50 9-58 84-147 (197)
93 2k9l_A RNA polymerase sigma fa 28.6 28 0.00094 21.5 1.7 29 27-57 18-46 (76)
94 1yo3_A Dynein light chain 1; s 28.6 1E+02 0.0036 20.1 4.7 18 40-57 47-65 (102)
95 3rjs_A Dynein light chain moto 28.6 1.1E+02 0.0037 19.4 4.7 16 40-55 34-49 (89)
96 3kdg_A DNA mismatch repair pro 26.5 60 0.0021 23.9 3.6 26 36-61 66-91 (197)
97 5nul_A Flavodoxin; electron tr 26.4 49 0.0017 22.2 2.9 27 35-61 6-32 (138)
98 3lpe_A Putative transcription 26.2 72 0.0025 20.3 3.5 23 37-59 18-40 (92)
99 1yz7_A Probable translation in 25.8 2E+02 0.0068 21.1 7.0 47 137-183 83-131 (188)
100 3fay_A P195, RAS GTPase-activa 24.9 75 0.0026 26.2 4.2 36 2-37 282-317 (387)
101 1x9z_A DNA mismatch repair pro 24.6 55 0.0019 23.9 3.0 26 37-62 65-90 (188)
102 3t98_A Nuclear pore complex pr 24.3 1.1E+02 0.0036 17.5 4.8 24 2-25 12-35 (51)
103 1ejp_A Syndecan-4; symmetric-p 23.9 22 0.00074 17.4 0.4 8 1-8 8-15 (28)
104 1qgp_A Protein (double strande 22.5 1.4E+02 0.0047 18.1 4.2 16 42-57 45-60 (77)
105 3ncv_A DNA mismatch repair pro 22.4 61 0.0021 24.5 3.0 26 36-61 88-113 (220)
106 1xw8_A UPF0271 protein YBGL; N 22.0 2.8E+02 0.0095 21.4 7.1 99 108-211 28-130 (252)
107 3hly_A Flavodoxin-like domain; 21.7 92 0.0032 21.7 3.7 28 34-61 7-34 (161)
108 2jx3_A Protein DEK; alpha heli 21.4 1.5E+02 0.0053 20.3 4.6 49 6-55 61-109 (131)
109 1uwd_A Hypothetical protein TM 21.3 69 0.0023 20.7 2.7 40 141-183 42-82 (103)
110 3fni_A Putative diflavin flavo 21.2 94 0.0032 21.7 3.7 28 34-61 11-38 (159)
111 2fz5_A Flavodoxin; alpha/beta 20.7 81 0.0028 20.8 3.1 27 35-61 7-33 (137)
112 4gdk_C APG16-like 1, autophagy 20.5 1.1E+02 0.0036 16.1 3.5 29 5-33 2-30 (36)
113 2qlc_A DNA repair protein RADC 20.4 40 0.0014 23.1 1.4 30 31-60 74-107 (126)
114 3pam_A Transmembrane protein; 20.2 68 0.0023 24.2 2.9 21 41-61 140-160 (259)
No 1
>3io1_A Aminobenzoyl-glutamate utilization protein; peptidase_M20D superfamily, protein structure initiative II, NYSGXRC, structural genomics; 2.50A {Klebsiella pneumoniae subsp}
Probab=100.00 E-value=1.1e-41 Score=294.68 Aligned_cols=204 Identities=25% Similarity=0.285 Sum_probs=167.7
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecC-------------------------
Q 045912 9 FADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPL------------------------- 63 (218)
Q Consensus 9 ~~~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~------------------------- 63 (218)
|+.+|.++++++++++++++++||++||++++|.+|++||+++|+++||++++..
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~lh~~Pe~~~~E~~t~~~i~~~L~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (445)
T 3io1_A 1 MSLQLDEYLRQLAPSMTQWRRDFHLHAESGWLEFRTASKVADILDGLGYQLALGRDVIDADSRMGLPDEETLARAFERAR 80 (445)
T ss_dssp --CCHHHHHHTTHHHHHHHHHHHHHTCCCTTCCHHHHHHHHHHHHHTTCEEEEGGGTSCSTTCCSCCCHHHHHHHHHHHH
T ss_pred CcchHHHHHHHHHHHHHHHHHHHHhCCCCCCcHHHHHHHHHHHHHHCCCeEEecccccccccccccccchhhhhhhhhhc
Confidence 3456889999999999999999999999999999999999999999999987632
Q ss_pred --------------CCceEEEEecCC-CCcEEEEEeeCCCCCccccC---CCCcc----ccCCCcccccCCcHHHHHHHH
Q 045912 64 --------------VKTGIVAKIGSG-SHPFIALRADMDALPLQELV---NWEHK----SKIDGKMHACGHDAPTTMLLG 121 (218)
Q Consensus 64 --------------~~~~via~~~~~-~~~~i~~~~h~D~vp~~~~~---~~pf~----~~~~g~~~~~G~d~~~a~ll~ 121 (218)
+++||+|+++++ ++|+|+|+|||||||+++.+ .+||. +..+|++||||||+|+|++|+
T Consensus 81 ~~g~~~~~~~~~~~~~~~vva~~~~~~~g~~i~l~ah~Davp~~e~~~~~~~Pf~~~~~s~~~G~~h~cGhd~~~a~~l~ 160 (445)
T 3io1_A 81 EQGAPERWLPAFEGGFAGVVATLDTGRPGPTLAFRVDMDALDLNEQHDDSHRPHRDHFASCNAGMMHACGHDGHTAIGLG 160 (445)
T ss_dssp TTTCCTTTGGGGTTTCCCEEEEEECSSCCCEEEEEEECCCCCC-------------------------CTTCTHHHHHHH
T ss_pred cccccccccccccCCCCEEEEEEeCCCCCCEEEEEEecCCcCCCCCCCCCcCccccccccCCCCceEecCchHHHHHHHH
Confidence 579999999764 47999999999999987644 45654 556899999999999999999
Q ss_pred HHHHHHhhcccCC-------------------------------------------------------------------
Q 045912 122 EAKLLHRRKDQLN------------------------------------------------------------------- 134 (218)
Q Consensus 122 aa~~L~~~~~~~~------------------------------------------------------------------- 134 (218)
+++.|++.+..++
T Consensus 161 aa~~L~~~~~~~~g~v~l~f~p~EE~~~Ga~~~i~~g~~~~~d~~~~~h~~~~~~~g~i~~~~~g~~a~~~~~i~v~Gk~ 240 (445)
T 3io1_A 161 LAHVLKQYAAQLNGVIKLIFQPAEEGTRGARAMVAAGVVDDVDYFTAIHIGTGVPAGTVVCGGDNFMATTKFDVQFSGVA 240 (445)
T ss_dssp HHHHHHHTGGGCCSEEEEEEESCTTTTCHHHHHHHTTTTTTCSEEEEEEEEEEEETTBEESCCCCBCEEEEEEEEEECCC
T ss_pred HHHHHHhCcCcCCceEEEEEeccccccchHHHHHHcCCccccceeEEEeccCCCCCCeEEEecCCeeEEEEEEEEEEeec
Confidence 9999987654332
Q ss_pred ----------------------------------------------CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHH
Q 045912 135 ----------------------------------------------AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVV 168 (218)
Q Consensus 135 ----------------------------------------------~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~ 168 (218)
+.||||++|++.+|+|+.+.+..+.+.++|++++
T Consensus 241 ~HaGs~P~~g~nAi~~aa~~i~~l~~l~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~ 320 (445)
T 3io1_A 241 AHAGGKPEDGRNALLAAAQAALGLHAIPPHSAGASRVNVGVMQAGTGRNVVPSSALLKVETRGESEAINQYVFERAQHVV 320 (445)
T ss_dssp SSTTCCGGGCCCHHHHHHHHHHHHHTCCCBTTBCEEEEEEEEEECSCTTSCCCEEEEEEEEEESSHHHHHHHHHHHHHHH
T ss_pred CCCCCCCcCCcCHHHHHHHHHHHHHHHHhhcCCCeEEEEEEEecCCCCceeCCeEEEEEEEecCCHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999
Q ss_pred HHHHHHhCCeEEEEeeecccCCCCcccCCHHHHHHHHHHHHhhcCCCC
Q 045912 169 KQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSLLGPEN 216 (218)
Q Consensus 169 ~~~a~~~g~~~~i~~~~~~~~~~p~~~~d~~l~~~l~~~~~~~~G~~~ 216 (218)
++++..+++++++++ ...+|++.+|+++++.+++++++++|.+.
T Consensus 321 ~~~a~~~g~~~~i~~----~~~~~~~~~d~~l~~~~~~a~~~~~g~~~ 364 (445)
T 3io1_A 321 AGAAAMYEARYELRM----MGAATASAPSPAWVDYLREQAARVPGVQQ 364 (445)
T ss_dssp HHHHHHTTCEEEEEE----EEEECCCCCCHHHHHHHHHHHHHSTTCCB
T ss_pred HHHHHHhCCeEEEEE----ecCCCCcCCCHHHHHHHHHHHHHhcCCcc
Confidence 999999999999998 66788999999999999999998877653
No 2
>3ram_A HMRA protein; two-domain, catalytic (alpha-beta-alpha) motif, tetramerisat (alpha,beta,BETA,alpha), endoprotease, hydrolase; 2.70A {Staphylococcus aureus}
Probab=100.00 E-value=1.8e-36 Score=258.27 Aligned_cols=187 Identities=26% Similarity=0.308 Sum_probs=168.0
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCC--CceEEEEecCC-CCcEEEEEee
Q 045912 9 FADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLV--KTGIVAKIGSG-SHPFIALRAD 85 (218)
Q Consensus 9 ~~~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~--~~~via~~~~~-~~~~i~~~~h 85 (218)
|+++|.++++++++++++++++||+|||+|++|.++++||.++|+++||++++... ++||+|+++++ ++|+|+|+||
T Consensus 3 ~~~~i~~~~~~~~~~~~~~~~~l~~~pe~s~~E~~~~~~i~~~l~~~G~~v~~~~~g~~~~via~~~g~~~g~~i~l~ah 82 (394)
T 3ram_A 3 EKQQILDYIETNKYSYIEISHRIHERPELGNEEIFASRTLIDRLKEHDFEIETEIAGHATGFIATYDSGLDGPAIGFLAE 82 (394)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEEEEEETTEEEEEEEEEECSSSSCEEEEEEC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhCCCCCcchHHHHHHHHHHHHHcCCeEEeCCCCCceEEEEEEeCCCCCCEEEEEEe
Confidence 67899999999999999999999999999999999999999999999999876533 57999999654 4699999999
Q ss_pred CCCCCccccCCCCccccCCCcccccCCcHHHHHHHHHHHHHHhhcccCC-------------------------------
Q 045912 86 MDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLN------------------------------- 134 (218)
Q Consensus 86 ~D~vp~~~~~~~pf~~~~~g~~~~~G~d~~~a~ll~aa~~L~~~~~~~~------------------------------- 134 (218)
||||| |++|+||||+++|+++++++.|++.+..++
T Consensus 83 ~D~vp--------------g~~ha~G~d~~~a~~l~aa~~L~~~~~~~~g~v~~~f~~~EE~~~~~Ga~~~~~~~g~~~~ 148 (394)
T 3ram_A 83 YDALP--------------GLGHACGHNIIGTASVLGAIGLKQVIDQIGGKVVVLGCPAEEGGENGSAKASYVKAGVIDQ 148 (394)
T ss_dssp CCCCT--------------TTSSTTCHHHHHHHHHHHHHHHHTTHHHHCSEEEEEECCCTTCCTTCCHHHHHHHHTGGGG
T ss_pred cccCC--------------CcceECCccHHHHHHHHHHHHHHHhHhhCCceEEEEEECCccCCCCCchHHHHHHcCCccc
Confidence 99999 678999999999999999999986532111
Q ss_pred -------------------------------------------------------------------------------C
Q 045912 135 -------------------------------------------------------------------------------A 135 (218)
Q Consensus 135 -------------------------------------------------------------------------------~ 135 (218)
+
T Consensus 149 ~d~~~~~h~~~~~~~~~~~~g~~~~~i~v~Gk~~Ha~~~P~~g~nAi~~a~~~i~~l~~l~~~~~~~~~~~~~~i~gG~~ 228 (394)
T 3ram_A 149 IDIALMIHPGNETYKTIDTLAVDVLDVKFYGKSAHASENADEALNALDAMISYFNGVAQLRQHIKKDQRVHGVILDGGKA 228 (394)
T ss_dssp CSEEECCEEESSBBCCCCBCEEEEEEEEEECBCCBHHHHGGGCBCHHHHHHHHHHHHHHHGGGSCTTCEEEEEEEEBCSC
T ss_pred CCEEEEECCccccCCCccccceeEEEEEEEccccccCCCCcCCCCHHHHHHHHHHHHHHHHhhCCCCCeeEEEEEECCCC
Confidence 7
Q ss_pred CCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCCCCcccCCHHHHHHHHHHHHhhcC
Q 045912 136 ADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSLLG 213 (218)
Q Consensus 136 ~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~p~~~~d~~l~~~l~~~~~~~~G 213 (218)
.||||++|++.+|+|+.+.+..+.+.++|++++++++..+|+++++++. ...+|++.+|+++++.+++++++ +|
T Consensus 229 ~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~ei~~~---~~~~~~~~~d~~l~~~~~~a~~~-~G 302 (394)
T 3ram_A 229 ANIIPDYTHARFYTRAMTRKELDILTEKVNQIARGAAIQTGCDYEFGPI---QNGVNEFIKTPKLDDLFAKYAEE-VG 302 (394)
T ss_dssp TTBCCSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEES---SCCBCCCCCCHHHHHHHHHHHHH-TT
T ss_pred CceeCCeEEEEEEEeeCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEEe---cCCCCCccCCHHHHHHHHHHHHH-hC
Confidence 8999999999999999999999999999999999999999999999862 35788999999999999999987 57
No 3
>1xmb_A IAA-amino acid hydrolase homolog 2; structural genomics, protein structure initiative, CESG AT5G56660, ILL2, indole-3-acetic acid, auxin; 2.00A {Arabidopsis thaliana} SCOP: c.56.5.4 d.58.19.1 PDB: 2q43_A
Probab=100.00 E-value=1.8e-36 Score=260.07 Aligned_cols=201 Identities=52% Similarity=0.897 Sum_probs=173.2
Q ss_pred HHHHHHHHHHHhH--HHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCCCCcEEEEEeeC
Q 045912 9 FADQILIETERDK--NWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADM 86 (218)
Q Consensus 9 ~~~~i~~~i~~~~--~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~~~~~i~~~~h~ 86 (218)
|++++.+++++++ +++++++++||+|||++++|.++++||.++|+++||++++..+++|++|+++++++|+|+|+|||
T Consensus 13 ~~~~i~~~~~~~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~l~a~~~~~~~~~i~l~aH~ 92 (418)
T 1xmb_A 13 IQTKLLEFAKSPEVFDWMVKIRRKIHENPELGYEELETSKLIRSELELIGIKYRYPVAITGVIGYIGTGEPPFVALRADM 92 (418)
T ss_dssp ---CHHHHHHSHHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHHTCCEEEEETTTEEEEEEESSSSCEEEEEEEC
T ss_pred HHHHHHHHHHhhhcHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHHcCCeeEeccCCcEEEEEEcCCCCCEEEEEecc
Confidence 4556888999999 99999999999999999999999999999999999998775457899999965422899999999
Q ss_pred CCCCccccCCCCccccCCCcccccCCcHHHHHHHHHHHHHHhhcccCC--------------------------------
Q 045912 87 DALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLN-------------------------------- 134 (218)
Q Consensus 87 D~vp~~~~~~~pf~~~~~g~~~~~G~d~~~a~ll~aa~~L~~~~~~~~-------------------------------- 134 (218)
||||+++++.+||++..+|++||||||+++|++|++++.|++.+..++
T Consensus 93 D~vp~~~~~~~pf~~~~~g~~~g~G~d~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EEg~~G~~~~~~~g~~~~~d~~ 172 (418)
T 1xmb_A 93 DALPIQEGVEWEHKSKIAGKMHACGHDGHVTMLLGAAKILHEHRHHLQGTVVLIFQPAEEGLSGAKKMREEGALKNVEAI 172 (418)
T ss_dssp CCBSCCCCCCSTTCCSSTTCBCCSSHHHHHHHHHHHHHHHHHTGGGCSSEEEEEEECCTTTTCHHHHHHHTTTTTTEEEE
T ss_pred cccCCCCCCCCCcccCCCCceEeCCchHHHHHHHHHHHHHHhccccCCceEEEEEeccccccccHHHHHHcCCcCCCCEE
Confidence 999999999999999888999999999999999999999987653322
Q ss_pred --------------------------------------------------------------------------------
Q 045912 135 -------------------------------------------------------------------------------- 134 (218)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (218)
T Consensus 173 i~~~~~~~~~~g~~~~~~~~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~t~~vg~i 252 (418)
T 1xmb_A 173 FGIHLSARIPFGKAASRAGSFLAGAGVFEAVITGKGGHAAIPQHTIDPVVAASSIVLSLQQLVSRETDPLDSKVVTVSKV 252 (418)
T ss_dssp EEEEEEEEEETTCEEECSEEEECEEEEEEEEEEEC---------CCHHHHHHHHHHHHHHTTCBCCSSGGGCEEEEEEEE
T ss_pred EEEecCCCCCCceeEeeeccccccceeEEEEEEecCcccCCCccCCCHHHHHHHHHHHHHHHHhcccCCCCCcEEEEEEE
Confidence
Q ss_pred ----CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCC----CCcccCCHHHHHHHHH
Q 045912 135 ----AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPL----IPAALDNDSLYLLVER 206 (218)
Q Consensus 135 ----~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~----~p~~~~d~~l~~~l~~ 206 (218)
+.|+||++|++.+|+|+.+ ..+++.++|+++++..+..+++++++++ ... +|++.+|+++++.+++
T Consensus 253 ~gG~~~NvIP~~a~~~~diR~~~--~~~~i~~~i~~~~~~~a~~~g~~~~~~~----~~~~~~p~~~~~~d~~l~~~~~~ 326 (418)
T 1xmb_A 253 NGGNAFNVIPDSITIGGTLRAFT--GFTQLQQRVKEVITKQAAVHRCNASVNL----TPNGREPMPPTVNNKDLYKQFKK 326 (418)
T ss_dssp C--------CCEEEEEEEEEESS--CHHHHHHHHHHHHHHHHHHTTEEEEEES----SGGGCCCBCCEEECHHHHHHHHH
T ss_pred EecCcCCcCCCeEEEEEEEccCc--HHHHHHHHHHHHHHHHHHHhCCeEEEEE----ccCCcccCCCccCCHHHHHHHHH
Confidence 6799999999999999999 8999999999999999888899998887 555 7788889999999999
Q ss_pred HHHhhcCCC
Q 045912 207 VGKSLLGPE 215 (218)
Q Consensus 207 ~~~~~~G~~ 215 (218)
++++++|.+
T Consensus 327 ~~~~~~g~~ 335 (418)
T 1xmb_A 327 VVRDLLGQE 335 (418)
T ss_dssp HHHHHHCGG
T ss_pred HHHHhcCCc
Confidence 999877764
No 4
>1ysj_A Protein YXEP; M20 family peptidase, dinuclear metal binding, structural GE PSI, protein structure initiative; 2.40A {Bacillus subtilis} SCOP: c.56.5.4 d.58.19.1
Probab=100.00 E-value=2.3e-35 Score=252.22 Aligned_cols=194 Identities=35% Similarity=0.540 Sum_probs=172.1
Q ss_pred HHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeec-CCCceEEEEecCC-CCcEEEEEeeCCCCCccccC
Q 045912 18 ERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCP-LVKTGIVAKIGSG-SHPFIALRADMDALPLQELV 95 (218)
Q Consensus 18 ~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~-~~~~~via~~~~~-~~~~i~~~~h~D~vp~~~~~ 95 (218)
++.++++++++++|++|||++++|.++++||.++|+++|++++.. .+++||+|+++++ ++|+|+|+|||||||.++|+
T Consensus 28 ~~~~~~~i~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~nv~a~~~g~~~~~~i~l~~H~D~vp~~~~~ 107 (404)
T 1ysj_A 28 KAFHTRLINMRRDLHEHPELSFQEVETTKKIRRWLEEEQIEILDVPQLKTGVIAEIKGREDGPVIAIRADIDALPIQEQT 107 (404)
T ss_dssp HHHHHHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHHHTTCEECCCTTCSSCEEEEEECSSCCCEEEEEEECCCBSCCCCC
T ss_pred HHHHHHHHHHHHHHHhcCCCCCChHHHHHHHHHHHHHcCCceEEeccCCceEEEEEeCCCCCCEEEEEEecccccCCCCC
Confidence 345678999999999999999999999999999999999998653 3468999999543 46899999999999999999
Q ss_pred CCCccccCCCcccccCCcHHHHHHHHHHHHHHhhcccCC-----------------------------------------
Q 045912 96 NWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRKDQLN----------------------------------------- 134 (218)
Q Consensus 96 ~~pf~~~~~g~~~~~G~d~~~a~ll~aa~~L~~~~~~~~----------------------------------------- 134 (218)
.+||++..+|++||||||+++|++|++++.|++.+..++
T Consensus 108 ~~Pf~~~~~g~l~g~G~kg~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~G~~~~~~~g~~~~~d~~i~~h~ep~~ 187 (404)
T 1ysj_A 108 NLPFASKVDGTMHACGHDFHTASIIGTAMLLNQRRAELKGTVRFIFQPAEEIAAGARKVLEAGVLNGVSAIFGMHNKPDL 187 (404)
T ss_dssp CCTTCCSSTTCBCTTSHHHHHHHHHHHHHHHHTCGGGCSSEEEEEEESCTTTTCHHHHHHHTTTTTTEEEEEEEEEETTS
T ss_pred CCCcccCCCCceEcCcChHHHHHHHHHHHHHHhccccCCceEEEEEecccccchhHHHHHhcCCCcCCCEEEEEecCCCC
Confidence 999999888999999999999999999999987543222
Q ss_pred ---------------------------------------------------------------------------CCCcc
Q 045912 135 ---------------------------------------------------------------------------AADVI 139 (218)
Q Consensus 135 ---------------------------------------------------------------------------~~NvI 139 (218)
+.|+|
T Consensus 188 ~~g~v~~~~g~~~~g~~~~~i~v~G~~~Has~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~NvI 267 (404)
T 1ysj_A 188 PVGTIGVKEGPLMASVDRFEIVIKGKGGHASIPNNSIDPIAAAGQIISGLQSVVSRNISSLQNAVVSITRVQAGTSWNVI 267 (404)
T ss_dssp CTTEEEECSEEEECCEEEEEEEEECC--------CCCCHHHHHHHHHHHHC-----------CCEEEEEEEEECSCSSSC
T ss_pred CCceEEeccChhhcccceEEEEEEccCccccCcccCCCHHHHHHHHHHHHHHHHhhhcCCCCCcEEEEEEEEcCCCCcee
Confidence 68999
Q ss_pred CCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCCCCcccCCHHHHHHHHHHHHhh-cCCC
Q 045912 140 SPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSL-LGPE 215 (218)
Q Consensus 140 Pd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~p~~~~d~~l~~~l~~~~~~~-~G~~ 215 (218)
|++|++.+|+|+.+.+..+.+.++|+++++..+..+++++++++ ...+|++.+++++++.++++++++ +|.+
T Consensus 268 P~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~~~----~~~~~~~~~~~~l~~~~~~~~~~~g~g~~ 340 (404)
T 1ysj_A 268 PDQAEMEGTVRTFQKEARQAVPEHMRRVAEGIAAGYGAQAEFKW----FPYLPSVQNDGTFLNAASEAAARLGYQTV 340 (404)
T ss_dssp CSEEEEEEEEECSSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE----EEEECCEEECGGGHHHHHHHHHHTTCEEE
T ss_pred cCceEEEEEEecCCHHHHHHHHHHHHHHHHHHHHHhCCEEEEEE----ecCCCCccCCHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999888999999887 567788888899999999999887 6643
No 5
>3pfo_A Putative acetylornithine deacetylase; metal binding, merops M20A family, amino-acid biosynthesis, metallopeptidase; 1.90A {Rhodopseudomonas palustris}
Probab=100.00 E-value=1.3e-33 Score=243.22 Aligned_cols=208 Identities=13% Similarity=0.096 Sum_probs=174.0
Q ss_pred CchHHHHHHHHHHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeec---------------------C
Q 045912 5 LDEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCP---------------------L 63 (218)
Q Consensus 5 ~~~~~~~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~---------------------~ 63 (218)
.+..+++++.++++++++++++++++||+|||+|++|.++++||+++|+++||++++. .
T Consensus 9 ~~~~~~~~i~~~i~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (433)
T 3pfo_A 9 KSDAITQSLRAAVDRNFNDQVAFLQRMVQFRSVRGEEAPQQEWLAQQFADRGYKVDTFSLADVDIASHPKAAPMDTIDPA 88 (433)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEEEETGGGTGGGSTTCCCCTTCCGG
T ss_pred cCHHHHHHHHHHHHhhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHCCCceEEEecchhhhhccccccccccccCC
Confidence 3556778899999999999999999999999999999999999999999999997642 3
Q ss_pred CCceEEEEecC-CCCcEEEEEeeCCCCCccc---cCCCCcccc-CCCcccccCC---cHHHHHHHHHHHHHHhhcccCC-
Q 045912 64 VKTGIVAKIGS-GSHPFIALRADMDALPLQE---LVNWEHKSK-IDGKMHACGH---DAPTTMLLGEAKLLHRRKDQLN- 134 (218)
Q Consensus 64 ~~~~via~~~~-~~~~~i~~~~h~D~vp~~~---~~~~pf~~~-~~g~~~~~G~---d~~~a~ll~aa~~L~~~~~~~~- 134 (218)
+++||+|++++ +++|+|+|+|||||||.++ |+.+||.+. .+|++||||| ++|+|++|++++.|++.+..++
T Consensus 89 ~~~~via~~~g~~~~~~v~l~aH~D~vp~~~~~~w~~~pf~~~~~~g~~~g~G~~D~k~~~a~~l~a~~~l~~~~~~~~~ 168 (433)
T 3pfo_A 89 GSMQVVATADSDGKGRSLILQGHIDVVPEGPVDLWSDPPYEAKVRDGWMIGRGAQDMKGGVSAMIFALDAIRTAGYAPDA 168 (433)
T ss_dssp GCEEEEEEECCCCCSCCEEEEEECCBCCCCCGGGCSSCTTTCCEETTEEECTTTTTTHHHHHHHHHHHHHHHHTTEEESS
T ss_pred CCcEEEEEEecCCCCCEEEEEcccCCcCCCCcccCCCCCCCcEEECCEEEecchhhhhHHHHHHHHHHHHHHHcCCCCCc
Confidence 46899999964 3568999999999999763 578999985 5899999998 4999999999999987653222
Q ss_pred --------------------------------------------------------------------------------
Q 045912 135 -------------------------------------------------------------------------------- 134 (218)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (218)
T Consensus 169 ~v~~~~~~~EE~g~~G~~~~~~~~~~~d~~i~~ep~~~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~~~~i~~ 248 (433)
T 3pfo_A 169 RVHVQTVTEEESTGNGALSTLMRGYRADACLIPEPTGHTLTRAQVGAVWFRLRVRGTPVHVAYSETGTSAILSAMHLIRA 248 (433)
T ss_dssp CEEEEEESCTTTTCHHHHHHHHTTCCCSEEEECCCCSSCEEEEECEEEEEEEEEECCCCBGGGGGGSCCHHHHHHHHHHH
T ss_pred cEEEEEEecCccCChhHHHHHhcCCCCCEEEEeCCCCCceEEecceEEEEEEEEEcCCCccCCCCcCcCHHHHHHHHHHH
Confidence
Q ss_pred ------------------------------------CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHh---
Q 045912 135 ------------------------------------AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVH--- 175 (218)
Q Consensus 135 ------------------------------------~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~--- 175 (218)
+.|+||++|++.+|+|+.+.+..+.+.++|++++++++..+
T Consensus 249 l~~l~~~~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP~~a~~~~~iR~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 328 (433)
T 3pfo_A 249 FEEYTKELNAQAVRDPWFGQVKNPIKFNVGIIKGGDWASSTAAWCELDCRLGLLTGDTPQEAMRGIEKCLADAQATDSFL 328 (433)
T ss_dssp HHHHHHHHHHHGGGCTTTTTSSSCSCEEEEEEEECSCTTBCCCEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHTTCHHH
T ss_pred HHHHHHHhhhccccCccccccCCCceEEeeeEECCCCCcccCcEEEEEEEEecCCCCCHHHHHHHHHHHHHHHhhhCccc
Confidence 45999999999999999999999999999999999887644
Q ss_pred -CCeEEEEeeecccCCCCccc--CCHHHHHHHHHHHHhhcCCC
Q 045912 176 -RCNAYVDFQVEEFPLIPAAL--DNDSLYLLVERVGKSLLGPE 215 (218)
Q Consensus 176 -g~~~~i~~~~~~~~~~p~~~--~d~~l~~~l~~~~~~~~G~~ 215 (218)
++++++++. ...+|++. +|+++++.+.+++++.+|.+
T Consensus 329 ~~~~~~v~~~---~~~~p~~~~~~d~~~~~~~~~a~~~~~G~~ 368 (433)
T 3pfo_A 329 SENPAELVWS---GFQADPAVCEPGGVAEDVLTAAHKAAFNAP 368 (433)
T ss_dssp HHSCCEEEEE---EEEECCEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred ccCCeEEEEe---cccCCcccCCCCCHHHHHHHHHHHHHhCCC
Confidence 245666651 13456654 47789999999998878865
No 6
>3dlj_A Beta-Ala-His dipeptidase; CNDP1, carnosine dipeptidase 1, structural genomics, structu genomics consortium, SGC, metallopeptidase M20 family; 2.26A {Homo sapiens}
Probab=100.00 E-value=1.7e-32 Score=239.57 Aligned_cols=208 Identities=14% Similarity=0.174 Sum_probs=178.0
Q ss_pred CchHHHHHHHHHHHHhHHHHHHHHHHHHhCCCC--CCC------hHHHHHHHHHHHHhcCCceeecC--------C----
Q 045912 5 LDEAFADQILIETERDKNWLISIRRQIHENPEL--RFE------VHNTNALIRSELDKLGITYSCPL--------V---- 64 (218)
Q Consensus 5 ~~~~~~~~i~~~i~~~~~~~~~~~~~L~~~pe~--~~~------E~~~a~~i~~~L~~~G~~~~~~~--------~---- 64 (218)
|....++++.++++++++++++++++||+|||+ |++ |.++++||+++|+++||++++.. +
T Consensus 8 ~~~~~~~~i~~~i~~~~~~~i~~l~~lv~ips~~~s~~~~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~g~~~~ 87 (485)
T 3dlj_A 8 PPPALLEKVFQYIDLHQDEFVQTLKEWVAIESDSVQPVPRFRQELFRMMAVAADTLQRLGARVASVDMGPQQLPDGQSLP 87 (485)
T ss_dssp CCSTTHHHHHHHHHHTHHHHHHHHHHHHTSCCBSSSCCHHHHHHHHHHHHHHHHHHHHTTCEEEEECCCEEEC--CCEEE
T ss_pred CChHHHHHHHHHHHHhHHHHHHHHHHHhcCCCccCCCCccccHHHHHHHHHHHHHHHHcCCeEEEEecCcccccCCCccC
Confidence 444457789999999999999999999999999 988 68999999999999999987632 2
Q ss_pred -CceEEEEecCC-CCcEEEEEeeCCCCCccc---cCCCCcccc-CCCcccccCC-c--HHHHHHHHHHHHHHhhcccCC-
Q 045912 65 -KTGIVAKIGSG-SHPFIALRADMDALPLQE---LVNWEHKSK-IDGKMHACGH-D--APTTMLLGEAKLLHRRKDQLN- 134 (218)
Q Consensus 65 -~~~via~~~~~-~~~~i~~~~h~D~vp~~~---~~~~pf~~~-~~g~~~~~G~-d--~~~a~ll~aa~~L~~~~~~~~- 134 (218)
.+||+|.++++ .+|+|+|+|||||||+++ |+.+||++. .+|++||||| | +|+|++|+|++.|++.+..++
T Consensus 88 ~~~~v~a~~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~ 167 (485)
T 3dlj_A 88 IPPVILAELGSDPTKGTVCFYGHLDVQPADRGDGWLTDPYVLTEVDGKLYGRGATDNKGPVLAWINAVSAFRALEQDLPV 167 (485)
T ss_dssp CCCEEEEEECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSS
T ss_pred CCcEEEEEECCCCCCCEEEEEeeecCCCCCCcccCCCCCCccEEECCEEEecccccCcHHHHHHHHHHHHHHHhCCCCCc
Confidence 24799999754 468999999999999864 688999986 5899999999 4 999999999999987654332
Q ss_pred --------------------------------------------------------------------------------
Q 045912 135 -------------------------------------------------------------------------------- 134 (218)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (218)
T Consensus 168 ~v~~~~~~~EE~g~~g~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g~~g~~~~~i~v~G~~~~~H~~~~g~~a 247 (485)
T 3dlj_A 168 NIKFIIEGMEEAGSVALEELVEKEKDRFFSGVDYIVISDNLWISQRKPAITYGTRGNSYFMVEVKCRDQDFHSGTFGGIL 247 (485)
T ss_dssp EEEEEEESCGGGTTTTHHHHHHHHTTTTSTTCCEEEECCCBCCC--CCEEEEEECEEEEEEEEEESCSSCEETTTSTTSS
T ss_pred cEEEEEEcccccCCccHHHHHHhhhhhcccCCCEEEEcCCCccCCCCeeEEEeccceEEEEEEEEECCCCCcCCCCCccc
Confidence
Q ss_pred ----------------C---------------------------------------------------------------
Q 045912 135 ----------------A--------------------------------------------------------------- 135 (218)
Q Consensus 135 ----------------~--------------------------------------------------------------- 135 (218)
.
T Consensus 248 ~~~~~~l~~~l~~l~~~~g~i~ipg~~~~v~p~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v 327 (485)
T 3dlj_A 248 HEPMADLVALLGSLVDSSGHILVPGIYDEVVPLTEEEINTYKAIHLDLEEYRNSSRVEKFLFDTKEEILMHLWRYPSLSI 327 (485)
T ss_dssp CCHHHHHHHHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHHHTSCCCHHHHHHHHTCSCCSCSSHHHHHHHHHTSCEEEE
T ss_pred cCHHHHHHHHHHhhCCCCCCEeCCCcccccCCCCHHHHHHHHhCCCCHHHHHHhcCCCcccccchHHHHHHHhcCCceEE
Confidence 0
Q ss_pred ------------CCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhC--CeEEEEeeecccCCCCcccCCH--H
Q 045912 136 ------------ADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHR--CNAYVDFQVEEFPLIPAALDND--S 199 (218)
Q Consensus 136 ------------~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g--~~~~i~~~~~~~~~~p~~~~d~--~ 199 (218)
.||||++|++.+|+|+.+.+..+.+.++|+++++.++.++| +++++++ ...+||+.+++ +
T Consensus 328 ~~i~gG~~gp~a~NVIP~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~a~~~g~~~~~~v~~----~~~~pp~~~~~d~~ 403 (485)
T 3dlj_A 328 HGIEGAFDEPGTKTVIPGRVIGKFSIRLVPHMNVSAVEKQVTRHLEDVFSKRNSSNKMVVSM----TLGLHPWIANIDDT 403 (485)
T ss_dssp EEEESSCCSSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCSSEEEEEE----EEEECCEECCTTSH
T ss_pred EEEecCCcCCCCCceeCCeeEEEEEEEcCCCCCHHHHHHHHHHHHHHhccccCCCeeEEEEE----cCCCCceeCCCCCH
Confidence 38999999999999999999999999999999999998888 4888887 56678876654 8
Q ss_pred HHHHHHHHHHhhcCCCC
Q 045912 200 LYLLVERVGKSLLGPEN 216 (218)
Q Consensus 200 l~~~l~~~~~~~~G~~~ 216 (218)
+++.+++++++++|.+.
T Consensus 404 ~~~~~~~a~~~~~G~~~ 420 (485)
T 3dlj_A 404 QYLAAKRAIRTVFGTEP 420 (485)
T ss_dssp HHHHHHHHHHHHHSSCC
T ss_pred HHHHHHHHHHHHhCCCc
Confidence 99999999998888754
No 7
>3pfe_A Succinyl-diaminopimelate desuccinylase; metal binding, merops M20 familiy, phosphorylase/hydrolase-L structural genomics; HET: MSE; 1.50A {Legionella pneumophila subsp}
Probab=100.00 E-value=1.7e-31 Score=232.53 Aligned_cols=201 Identities=9% Similarity=-0.026 Sum_probs=170.1
Q ss_pred HHHHHHHHHhH-HHHHHHHHHHHhCCCCCCC----------hHHHHHHHHHHHHhcCCc---eee--cCC-CceEEEEec
Q 045912 11 DQILIETERDK-NWLISIRRQIHENPELRFE----------VHNTNALIRSELDKLGIT---YSC--PLV-KTGIVAKIG 73 (218)
Q Consensus 11 ~~i~~~i~~~~-~~~~~~~~~L~~~pe~~~~----------E~~~a~~i~~~L~~~G~~---~~~--~~~-~~~via~~~ 73 (218)
+++.+++++++ +++++++++||+|||+|++ |.++++||+++|+++||+ ++. ..+ ++||+|+++
T Consensus 6 ~~~~~~~~~~~~~~~~~~l~~lv~ips~s~~~~~~~~~~~~e~~~~~~i~~~l~~~G~~~~~~~~~~~~~~~~~v~a~~~ 85 (472)
T 3pfe_A 6 QGLYDYICQQWQEEILPSLCDYIKIPNKSPHFDAKWEEHGYMEQAVNHIANWCKSHAPKGMTLEIVRLKNRTPLLFMEIP 85 (472)
T ss_dssp HHHHHHHHHHHHHTHHHHHHHHHTCCCBCGGGCTTHHHHCHHHHHHHHHHHHHHHTCCTTCEEEEECCTTSCCEEEEEEC
T ss_pred HHHHHHHHHhhHHHHHHHHHHHhCCCCcCCCccccccccchHHHHHHHHHHHHHHcCCCCcceEEEecCCCCcEEEEEEc
Confidence 57889999998 8999999999999999975 899999999999999995 432 223 589999996
Q ss_pred CCCCcEEEEEeeCCCCCccc-cC--CCCcccc-CCCcccccCC-c--HHHHHHHHHHHHHHhhcccCC------------
Q 045912 74 SGSHPFIALRADMDALPLQE-LV--NWEHKSK-IDGKMHACGH-D--APTTMLLGEAKLLHRRKDQLN------------ 134 (218)
Q Consensus 74 ~~~~~~i~~~~h~D~vp~~~-~~--~~pf~~~-~~g~~~~~G~-d--~~~a~ll~aa~~L~~~~~~~~------------ 134 (218)
++.+|+|+|+|||||||+++ |+ .+||++. .+|++||||| | +|+|++|+|++.|++.+..+.
T Consensus 86 g~~~~~i~l~~H~D~vp~~~~w~~~~~Pf~~~~~~g~~~grG~~D~K~~~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE~ 165 (472)
T 3pfe_A 86 GQIDDTVLLYGHLDKQPEMSGWSDDLHPWKPVLKNGLLYGRGGADDGYSAYASLTAIRALEQQGLPYPRCILIIEACEES 165 (472)
T ss_dssp CSEEEEEEEEEECCBCCCCSCCCTTCBTTBCEEETTEEESTTCCCCCHHHHHHHHHHHHHHHTTCCCEEEEEEEESCGGG
T ss_pred CCCCCeEEEEccccCCCCcCCCCcCCCCCceEEECCEEEEeCcccCcHHHHHHHHHHHHHHHcCCCCCcEEEEEEeCCCC
Confidence 54458999999999999864 57 8999985 5899999999 6 999999999999987653221
Q ss_pred --------------------------------------------------------------------------------
Q 045912 135 -------------------------------------------------------------------------------- 134 (218)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (218)
T Consensus 166 g~~g~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~i~~g~~G~~~~~~~v~~~G~~~H~~~~~~~~~nai~~~~~~i~~ 245 (472)
T 3pfe_A 166 GSYDLPFYIELLKERIGKPSLVICLDSGAGNYEQLWMTTSLRGNLVGKLTVELINEGVHSGSASGIVADSFRVARQLISR 245 (472)
T ss_dssp TSTTHHHHHHHHHHHHCCCSEEEEECCBCSCSSSCEEEEEECEEEEEEEEEESCSSCBCHHHHTTTSCCHHHHHHHHHHH
T ss_pred CChhHHHHHHHhHhhccCCCEEEEeCCCcCCCCCeeEEEeeeEEEEEEEEEEeCCCCcccCCCCCCCCCHHHHHHHHHHH
Confidence
Q ss_pred ---C----------------------------------------------------------------------------
Q 045912 135 ---A---------------------------------------------------------------------------- 135 (218)
Q Consensus 135 ---~---------------------------------------------------------------------------- 135 (218)
.
T Consensus 246 l~~~~~~~i~i~gf~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tl~i~~i~gG~~~g~ 325 (472)
T 3pfe_A 246 IEDENTGEIKLPQLYCDIPDERIKQAKQCAEILGEQVYSEFPWIDSAKPVIQDKQQLILNRTWRPALTVTGADGFPAIAD 325 (472)
T ss_dssp HBCTTTCCBCCGGGCCCCCHHHHHHHHHHHHHHGGGGTTTSCCCTTCCCSCSCHHHHHHHHHTSCEEEEEEEESCCCTTT
T ss_pred hhCcCCCCEeCCCcccCCCCccHHHHHHHhhhccHHHHHhcccccCccccccchHHHHHHhhcCCcEEEeeeecCcCCCC
Confidence 2
Q ss_pred -CCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccC-CCCccc---CCHHHHHHHHHHHHh
Q 045912 136 -ADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFP-LIPAAL---DNDSLYLLVERVGKS 210 (218)
Q Consensus 136 -~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~-~~p~~~---~d~~l~~~l~~~~~~ 210 (218)
.||||++|++.+|+|+.+.+..+.+.++|+++++.++ .+++++++++ .. .+||+. +++.+++.+++++++
T Consensus 326 a~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~-~~g~~v~v~~----~~~~~pp~~~~~n~~~l~~~~~~a~~~ 400 (472)
T 3pfe_A 326 AGNVMRPVTSLKLSMRLPPLVDPEAASVAMEKALTQNP-PYNAKVDFKI----QNGGSKGWNAPLLSDWLAKAASEASMT 400 (472)
T ss_dssp CCSCBCSEEEEEEEEEECTTCCHHHHHHHHHHHHHSSC-GGGCEEEEEE----CSCCBCCEECCCCCHHHHHHHHHHHHH
T ss_pred CCCEeCCccEEEEEeecCCCCCHHHHHHHHHHHHHhhC-CCCeEEEEEe----cCCCCCcccCCCCChHHHHHHHHHHHH
Confidence 1899999999999999999999999999999998776 6789999988 66 777765 457788999999988
Q ss_pred hcCCCC
Q 045912 211 LLGPEN 216 (218)
Q Consensus 211 ~~G~~~ 216 (218)
++|.+.
T Consensus 401 ~~G~~~ 406 (472)
T 3pfe_A 401 YYDKPA 406 (472)
T ss_dssp HHSSCC
T ss_pred HcCCCc
Confidence 888753
No 8
>3isz_A Succinyl-diaminopimelate desuccinylase; DAPE, Zn-binding, metallopeptidase, structural genomics, PSI-2, protein struc initiative; 2.00A {Haemophilus influenzae} PDB: 3ic1_A
Probab=99.97 E-value=1.6e-30 Score=219.78 Aligned_cols=186 Identities=17% Similarity=0.228 Sum_probs=154.5
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeec--CCCceEEEEecCCCCcEEEEEeeCCCCCccc---cC
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCP--LVKTGIVAKIGSGSHPFIALRADMDALPLQE---LV 95 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~--~~~~~via~~~~~~~~~i~~~~h~D~vp~~~---~~ 95 (218)
.+++++++++||++||+|++|.++++||.++|+++|++++.. .+.+|++|+++. ++|+|+|+|||||||.++ |+
T Consensus 2 ~~~~~~~~~~L~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~~~~~~~n~~a~~g~-~~~~i~l~aH~D~vp~~~~~~w~ 80 (377)
T 3isz_A 2 KEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGT-SEPVIAFAGHTDVVPTGDENQWS 80 (377)
T ss_dssp HHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEEEECCBTTBCEEEEEEES-SSCEEEEEEECCBCCCCCGGGCS
T ss_pred chHHHHHHHHHhcCCCCCCChhhHHHHHHHHHHHCCCceEEeecCCCceEEEEeCC-CCCEEEEeccccccCCCCcccCC
Confidence 357899999999999999999999999999999999998753 245899999853 469999999999999864 68
Q ss_pred CCCccccC-CCcccccCC-c--HHHHHHHHHHHHHHhhcccCC-------------------------------------
Q 045912 96 NWEHKSKI-DGKMHACGH-D--APTTMLLGEAKLLHRRKDQLN------------------------------------- 134 (218)
Q Consensus 96 ~~pf~~~~-~g~~~~~G~-d--~~~a~ll~aa~~L~~~~~~~~------------------------------------- 134 (218)
.+||++.+ +|++||||| | +++++++.+++.|.+.+..++
T Consensus 81 ~~pf~~~~~~g~~~g~G~~D~k~g~~~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~G~~~~~~~~~~~~~~~d~~~ 160 (377)
T 3isz_A 81 SPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKANPNHKGTIALLITSDEEATAKDGTIHVVETLMARDEKITYCM 160 (377)
T ss_dssp SCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCSSSHHHHHHHHHHTTCCCCEEE
T ss_pred CCCCCcEEECCEEEeCChhhhhHHHHHHHHHHHHHHHhCCCCCceEEEEEEcccccCccccHHHHHHHHHhcCCCCCEEE
Confidence 89999984 899999999 6 677888887877765432221
Q ss_pred --------------------------------------------------------------------------------
Q 045912 135 -------------------------------------------------------------------------------- 134 (218)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (218)
T Consensus 161 ~~e~~~~~~~g~~i~~g~~g~~~~~i~~~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~~~~~~~v~~i~gg 240 (377)
T 3isz_A 161 VGEPSSAKNLGDVVKNGRRGSITGNLYIQGIQGHVAYPHLAENPIHKAALFLQELTTYQWDKGNEFFPPTSLQIANIHAG 240 (377)
T ss_dssp ECCCCBSSSTTSEEEEEECEEEEEEEEEECC-------CGGGCHHHHHHHHHHHHHHCCCCCCCSSSCCCEEEEEEEEEC
T ss_pred EcCCCCcccCCceEEEEcceEEEEEEEEEccccccCCCccCcCHHHHHHHHHHHHHhccccccccccCCceeEEEEEECC
Confidence
Q ss_pred --CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCC-CCcccCCHHHHHHHHHHHHhh
Q 045912 135 --AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPL-IPAALDNDSLYLLVERVGKSL 211 (218)
Q Consensus 135 --~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~-~p~~~~d~~l~~~l~~~~~~~ 211 (218)
+.|+||++|++.+|+|+.+.+..+++.++++++++. .|+++++++ ... .|...+++++++.++++++++
T Consensus 241 ~~~~nvip~~~~~~~diR~~~~~~~~~i~~~i~~~~~~----~g~~~~i~~----~~~~~p~~~~~~~l~~~l~~a~~~~ 312 (377)
T 3isz_A 241 TGSNNVIPAELYIQFNLRYCTEVTDEIIKQKVAEMLEK----HNLKYRIEW----NLSGKPFLTKPGKLLDSITSAIEET 312 (377)
T ss_dssp CSCSSCCCSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEE----EECCCCEECCTTHHHHHHHHHHHHH
T ss_pred CCCCcccCCceEEEEEEecCCCCCHHHHHHHHHHHHHH----cCCCeEEEE----EecCCCCcCCCCHHHHHHHHHHHHH
Confidence 479999999999999999999999999999888763 688888887 333 344456789999999999887
Q ss_pred cCCC
Q 045912 212 LGPE 215 (218)
Q Consensus 212 ~G~~ 215 (218)
+|.+
T Consensus 313 ~g~~ 316 (377)
T 3isz_A 313 IGIT 316 (377)
T ss_dssp HSCC
T ss_pred hCCC
Confidence 7764
No 9
>3rza_A Tripeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; HET: CIT PG4 PGE; 2.10A {Staphylococcus aureus subsp}
Probab=99.97 E-value=1.2e-30 Score=222.39 Aligned_cols=195 Identities=15% Similarity=0.181 Sum_probs=162.4
Q ss_pred HHHHHHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecC-------CCceEEEEecCC----CCcEE
Q 045912 12 QILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPL-------VKTGIVAKIGSG----SHPFI 80 (218)
Q Consensus 12 ~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~-------~~~~via~~~~~----~~~~i 80 (218)
....+++.+++++++++++|++|||+|++|.++++||.++|+++|++++... +.+||+|+++++ ++|+|
T Consensus 14 ~~~~~~~~~~~~~~~~l~~L~~ips~s~~E~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nvia~~~g~~~~~~~~~i 93 (396)
T 3rza_A 14 NLYFQGMINEQRLLNTFLELVQIDSETGNESTIQPILKEKFIALGLDVKEDEAAKHPKLGANNLVCTMNSTIEEGEVPKL 93 (396)
T ss_dssp -----CCSCHHHHHHHHHHHHTSCCBTTCTTTHHHHHHHHHHHTTCEEEECSGGGSTTCSSCCEEEEECCCCC---CCCE
T ss_pred ceeEEEeecHHHHHHHHHHHeecCCCCcCHHHHHHHHHHHHHHCCCEEEEeccccccCCCCceEEEEECCcCCCCCCCeE
Confidence 4566778889999999999999999999999999999999999999987643 368999999653 46999
Q ss_pred EEEeeCCCCCccccCCCCcccc-C-CCcccccCC-----c--HHHHHHHHHHHHHHhhccc-CC----------------
Q 045912 81 ALRADMDALPLQELVNWEHKSK-I-DGKMHACGH-----D--APTTMLLGEAKLLHRRKDQ-LN---------------- 134 (218)
Q Consensus 81 ~~~~h~D~vp~~~~~~~pf~~~-~-~g~~~~~G~-----d--~~~a~ll~aa~~L~~~~~~-~~---------------- 134 (218)
+|+|||||||.++ +|.+. . +|++||||| | +|+|++|++++.|++.+.. ..
T Consensus 94 ~l~aH~D~vp~g~----~~~p~~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE~g~~Ga 169 (396)
T 3rza_A 94 YLTSHMDTVVPAI----NVKPIVKDDGYIYSDGTTILGADDKAGLAAMLEVLQVIKEQQIPHGQIQFVITVGEESGLIGA 169 (396)
T ss_dssp EEEEECCBCSSCS----SCCCEECTTSEEECCSSSCCCHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEEESCGGGTSHHH
T ss_pred EEEEECCccCCCC----CcceEEecCCEEECCCccccCcccHHHHHHHHHHHHHHHhcCCCCCCEEEEEEcccccccHhH
Confidence 9999999999764 33332 3 499999998 6 8999999999999875421 11
Q ss_pred --------------------------------------------------------------------------------
Q 045912 135 -------------------------------------------------------------------------------- 134 (218)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (218)
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~g~~~~~i~v~G~~~Ha~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~vg 249 (396)
T 3rza_A 170 KELNSELLDADFGYAIDASADVGTTVVGAPTQMLISAKIIGKTAHASTPKEGVSAINIAAKAISRMKLGQVDEITTANIG 249 (396)
T ss_dssp HHCCGGGCCCSEEEEEEESSCTTCEEEEECEEEEEEEEEECBCCBTTSGGGSBCHHHHHHHHHHHSCCEEEETTEEEEEE
T ss_pred hhhchhhcccceEEEEecCCCcceEEEcCCceEEEEEEEEeEecCCCCccccccHHHHHHHHHHhcccCCCCCCceeeee
Confidence
Q ss_pred ------CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCCCCcc--cCCHHHHHHHHH
Q 045912 135 ------AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAA--LDNDSLYLLVER 206 (218)
Q Consensus 135 ------~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~p~~--~~d~~l~~~l~~ 206 (218)
+.|+||++|++.+|+|+.+.+..+.+.++|++++++.+..+|+++++++ ...+|++ .+|+++++.+++
T Consensus 250 ~i~gG~~~NvIP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~a~~~g~~~~i~~----~~~~p~~~~~~d~~l~~~~~~ 325 (396)
T 3rza_A 250 KFHGGSATNIVADEVILEAEARSHDPERIKTQVKHMTDVFETTASELGGKAEVTV----EQSYPGFKINDNEAVVKIAQE 325 (396)
T ss_dssp EEEECSCTTBCCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE----EEEECCEECCTTSHHHHHHHH
T ss_pred EEecCCCCcccCceEEEEEEEEeCCHHHHHHHHHHHHHHHHHHHHhcCCEEEEEE----EeccCCcccCCCcHHHHHHHH
Confidence 6799999999999999999999999999999999999989999999988 6677776 468899999999
Q ss_pred HHHhhcCCC
Q 045912 207 VGKSLLGPE 215 (218)
Q Consensus 207 ~~~~~~G~~ 215 (218)
++++. |.+
T Consensus 326 ~~~~~-g~~ 333 (396)
T 3rza_A 326 SARNL-GLS 333 (396)
T ss_dssp HHHHT-TCC
T ss_pred HHHHc-CCC
Confidence 99874 653
No 10
>3gb0_A Peptidase T; NP_980509.1, aminopeptidase PEPT, peptidase family M20/M25/M structural genomics, joint center for structural genomics; 2.04A {Bacillus cereus atcc 10987}
Probab=99.97 E-value=6e-30 Score=216.32 Aligned_cols=187 Identities=14% Similarity=0.164 Sum_probs=159.5
Q ss_pred hHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecC-------CCceEEEEecCC--CCcEEEEEeeCCCCC
Q 045912 20 DKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPL-------VKTGIVAKIGSG--SHPFIALRADMDALP 90 (218)
Q Consensus 20 ~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~-------~~~~via~~~~~--~~~~i~~~~h~D~vp 90 (218)
+.+++++++++|++|||+|++|.++++||.++|+++|++++... +++||+|++++. ++|+|+|+||||+||
T Consensus 4 ~~~~~~~~l~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~v~~~~~~~~~~~~~~nv~a~~~g~~~~~~~v~l~aH~D~vp 83 (373)
T 3gb0_A 4 NQERLVNEFMELVQVDSETKFEAEICKVLTKKFTDLGVEVFEDDTMAVTGHGAGNLICTLPATKDGVDTIYFTSHMDTVV 83 (373)
T ss_dssp CHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCEEEECSCHHHHCCSSCCEEEEECCSSTTCCCEEEEEECCBCS
T ss_pred CHHHHHHHHHHHhcccCCCccHHHHHHHHHHHHHHCCCEEEEeccccccCCCceeEEEEecCCCCCCCEEEEEEECcccC
Confidence 35788999999999999999999999999999999999987653 258999999543 469999999999999
Q ss_pred ccccCCCCcccc-CCCcccccCC-----c--HHHHHHHHHHHHHHhhccc-CC---------------------------
Q 045912 91 LQELVNWEHKSK-IDGKMHACGH-----D--APTTMLLGEAKLLHRRKDQ-LN--------------------------- 134 (218)
Q Consensus 91 ~~~~~~~pf~~~-~~g~~~~~G~-----d--~~~a~ll~aa~~L~~~~~~-~~--------------------------- 134 (218)
.++ +|.+. .+|++||||| | +|+|++|++++.|++.+.. ..
T Consensus 84 ~~~----~~~p~~~~g~~~g~G~~~~g~D~k~g~a~~l~a~~~l~~~~~~~~~v~~~~~~~EE~g~~Ga~~~~~~~~~~~ 159 (373)
T 3gb0_A 84 PGN----GIKPSIKDGYIVSDGTTILGADDKAGLASMFEAIRVLKEKNIPHGTIEFIITVGEESGLVGAKALDRERITAK 159 (373)
T ss_dssp SCS----SCCCEEETTEEECCSSSCCCHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEESCGGGTSHHHHHSCGGGCCCS
T ss_pred CCC----CcCcEEECCEEECCCccccCcccHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeccccCchhhhhhCHHhcCCC
Confidence 764 34433 4799999998 7 8999999999999875421 11
Q ss_pred ----------------------------------------------------------------------------CCCc
Q 045912 135 ----------------------------------------------------------------------------AADV 138 (218)
Q Consensus 135 ----------------------------------------------------------------------------~~Nv 138 (218)
+.|+
T Consensus 160 ~~~~~~~~~~~g~i~~~~~g~~~~~i~~~G~~~Ha~~~p~~g~nai~~~~~~i~~l~~~~~~~~~~~~vg~i~gG~~~Nv 239 (373)
T 3gb0_A 160 YGYALDSDGKVGEIVVAAPTQAKVNAIIRGKTAHAGVAPEKGVSAITIAAKAIAKMPLGRIDSETTANIGRFEGGTQTNI 239 (373)
T ss_dssp EEEEEEECSCTTEEEEEECEEEEEEEEEECBCCBTTTCGGGSBCHHHHHHHHHTTSCCEEEETTEEEEEEEEEECSCTTB
T ss_pred EEEEEcCCCCCCeEEEcCCCcEEEEEEEEeEecCCCCChhhCcCHHHHHHHHHHhcccccCCCccccceeEEecCccccc
Confidence 6799
Q ss_pred cCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCCCCcc--cCCHHHHHHHHHHHHhhcCCC
Q 045912 139 ISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAA--LDNDSLYLLVERVGKSLLGPE 215 (218)
Q Consensus 139 IPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~p~~--~~d~~l~~~l~~~~~~~~G~~ 215 (218)
||++|++.+|+|+.+.+..+.+.++|+++++..+..+|+++++++ ...+|++ .+|+++++.+++++++ +|.+
T Consensus 240 ip~~~~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~g~~~~i~~----~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~ 313 (373)
T 3gb0_A 240 VCDHVQIFAEARSLINEKMEAQVAKMKEAFETTAKEMGGHADVEV----NVMYPGFKFADGDHVVEVAKRAAEK-IGRT 313 (373)
T ss_dssp CCCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHTTCEEEEEE----EEEECCEECCTTCHHHHHHHHHHHH-TTCC
T ss_pred ccceEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCeEEEEE----ecccCCcccCCCCHHHHHHHHHHHH-hCCC
Confidence 999999999999999999999999999999999999999999988 5667776 4688999999999987 4653
No 11
>1cg2_A Carboxypeptidase G2; metallocarboxypeptidase, hydrolase; 2.50A {Pseudomonas SP} SCOP: c.56.5.4 d.58.19.1
Probab=99.97 E-value=1.9e-30 Score=220.92 Aligned_cols=198 Identities=18% Similarity=0.151 Sum_probs=166.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhCCCCCCCh---HHHHHHHHHHHHhcCCceeecC-----CCceEEEEecCCCCcEEEE
Q 045912 11 DQILIETERDKNWLISIRRQIHENPELRFEV---HNTNALIRSELDKLGITYSCPL-----VKTGIVAKIGSGSHPFIAL 82 (218)
Q Consensus 11 ~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E---~~~a~~i~~~L~~~G~~~~~~~-----~~~~via~~~~~~~~~i~~ 82 (218)
+++.++++++.+++++++++|++|||+|++| .++++||.++|+++||+++... .++||+|++++..+|+|+|
T Consensus 8 ~~~~~~~~~~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~v~a~~~g~~~~~i~l 87 (393)
T 1cg2_A 8 NVLFQAATDEQPAVIKTLEKLVNIETGTGDAEGIAAAGNFLEAELKNLGFTVTRSKSAGLVVGDNIVGKIKGRGGKNLLL 87 (393)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTSCCBTTCHHHHHHHHHHHHHHHHHTTCEEEEEECSTTCCSEEEEEEEECSSCCCEEE
T ss_pred hHHHHHHHhhHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEecCcCCCCCeEEEEECCCCCceEEE
Confidence 5688899999999999999999999999886 7899999999999999987643 2579999997433489999
Q ss_pred EeeCCCCCc-cccCCCCccccCCCcccccCC-c--HHHHHHHHHHHHHHhhcccCC------------------------
Q 045912 83 RADMDALPL-QELVNWEHKSKIDGKMHACGH-D--APTTMLLGEAKLLHRRKDQLN------------------------ 134 (218)
Q Consensus 83 ~~h~D~vp~-~~~~~~pf~~~~~g~~~~~G~-d--~~~a~ll~aa~~L~~~~~~~~------------------------ 134 (218)
+|||||||. ++++.+||+. .+|++||||+ | +++|++|++++.|++.+..+.
T Consensus 88 ~aH~D~vp~~~~~~~~Pf~~-~~g~l~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~G~~~~~~~ 166 (393)
T 1cg2_A 88 MSHMDTVYLKGILAKAPFRV-EGDKAYGPGIADDKGGNAVILHTLKLLKEYGVRDYGTITVLFNTDEEKGSFGSRDLIQE 166 (393)
T ss_dssp EEECCBSCCTTHHHHSCCEE-ETTEEECTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEESCGGGTTTTTHHHHHH
T ss_pred EEecCcCCCCCccccCCeee-eCCEEEcCCcccchHHHHHHHHHHHHHHhcCCCCCCCEEEEEEcccccCCccHHHHHHH
Confidence 999999986 4567789994 5699999996 5 899999999999987653322
Q ss_pred --------------------------------------------------------------------------------
Q 045912 135 -------------------------------------------------------------------------------- 134 (218)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (218)
T Consensus 167 ~~~~~d~~i~~e~~~~~~~~i~~~~~G~~~~~i~v~G~~~Hag~~p~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~v~~i 246 (393)
T 1cg2_A 167 EAKLADYVLSFEPTSAGDEKLSLGTSGIAYVQVNITGKASHAGAAPELGVNALVEASDLVLRTMNIDDKAKNLRFNWTIA 246 (393)
T ss_dssp HHHHCSEEEECCCEETTSCEEESEECEEEEEEEEEECBCEETTSCGGGSBCHHHHHHHHHHHHGGGCBTTTTEEEEEEEE
T ss_pred HhhcCCEEEEeCCCCCCCCcEEEeeeeeEEEEEEEEeeecccCCCcccCcCHHHHHHHHHHHHHhhhCcccCceEEEEEE
Confidence
Q ss_pred ----CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCCCCcccCC---HHHHHHHHHH
Q 045912 135 ----AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDN---DSLYLLVERV 207 (218)
Q Consensus 135 ----~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~p~~~~d---~~l~~~l~~~ 207 (218)
+.|+||++|++.+|+|+.+.+..+.+.++|++++++ +...++++++++ ...+|++.++ +++++.++++
T Consensus 247 ~gG~~~NvIP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-~~~~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~ 321 (393)
T 1cg2_A 247 KAGNVSNIIPASATLNADVRYARNEDFDAAMKTLEERAQQ-KKLPEADVKVIV----TRGRPAFNAGEGGKKLVDKAVAY 321 (393)
T ss_dssp EECSSTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHTS-CSSTTCEEEEEE----EECSCCEECHHHHHHHHHHHHHH
T ss_pred eCCCCCCEECcccEEEEEEeeCChhhHHHHHHHHHHHHhc-ccCCCcEEEEEe----ccccCCccCCcchHHHHHHHHHH
Confidence 679999999999999999999999999999999876 334688888887 5677887664 7899999988
Q ss_pred HHhhcCCC
Q 045912 208 GKSLLGPE 215 (218)
Q Consensus 208 ~~~~~G~~ 215 (218)
++. +|.+
T Consensus 322 ~~~-~g~~ 328 (393)
T 1cg2_A 322 YKE-AGGT 328 (393)
T ss_dssp HHH-TTCC
T ss_pred HHH-hCCC
Confidence 875 5653
No 12
>1vgy_A Succinyl-diaminopimelate desuccinylase; structural genomics, unknown function; HET: MSE; 1.90A {Neisseria meningitidis} SCOP: c.56.5.4 d.58.19.1
Probab=99.97 E-value=8.2e-30 Score=216.99 Aligned_cols=186 Identities=15% Similarity=0.191 Sum_probs=153.8
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeec--CCCceEEEEecCCCCcEEEEEeeCCCCCccc---cC
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCP--LVKTGIVAKIGSGSHPFIALRADMDALPLQE---LV 95 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~--~~~~~via~~~~~~~~~i~~~~h~D~vp~~~---~~ 95 (218)
.+++++++++||+|||+|++|.++++||.++|+++||+++.. ...+||+|+++. .+|+|+|+|||||||.++ |+
T Consensus 5 ~~~~~~~l~~lv~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~Vp~~~~~~w~ 83 (393)
T 1vgy_A 5 ETQSLELAKELISRPSVTPDDRDCQKLMAERLHKIGFAAEEMHFGNTKNIWLRRGT-KAPVVCFAGHTDVVPTGPVEKWD 83 (393)
T ss_dssp CSHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSSEEEEEEECCBCCCCCGGGSS
T ss_pred hHHHHHHHHHHhcCCCCCCCcHHHHHHHHHHHHHcCCcEEEEecCCCcEEEEEECC-CCCEEEEEcccCCcCCCCcccCC
Confidence 356899999999999999999999999999999999998763 246899999953 358999999999999864 67
Q ss_pred CCCcccc-CCCcccccCC-c--HHHHHHHHHHHHHHhhcccCC-------------------------------------
Q 045912 96 NWEHKSK-IDGKMHACGH-D--APTTMLLGEAKLLHRRKDQLN------------------------------------- 134 (218)
Q Consensus 96 ~~pf~~~-~~g~~~~~G~-d--~~~a~ll~aa~~L~~~~~~~~------------------------------------- 134 (218)
.+||++. .+|++||||| | +++|++|.+++.|.+.+..++
T Consensus 84 ~~Pf~~~~~~g~l~grG~~D~k~~~aa~l~a~~~l~~~~~~~~~~v~~~~~~~EE~~~~~Ga~~~~~~~~~~~~~~d~~i 163 (393)
T 1vgy_A 84 SPPFEPAERDGRLYGRGAADMKTSIACFVTACERFVAKHPNHQGSIALLITSDEEGDALDGTTKVVDVLKARDELIDYCI 163 (393)
T ss_dssp SCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHCTTCSSEEEEEEESCSSSCCTTSHHHHHHHHHHTTCCEEEEE
T ss_pred CCCCceEEECCEEEecCcccchHHHHHHHHHHHHHHHhcCCCCCcEEEEEEeccccCCcCCHHHHHHHHHhcCcCCCEEE
Confidence 7899986 5899999999 6 778888888888775432221
Q ss_pred --------------------------------------------------------------------------------
Q 045912 135 -------------------------------------------------------------------------------- 134 (218)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (218)
T Consensus 164 ~~e~~~~~~~g~~i~~g~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~v~~i~gG 243 (393)
T 1vgy_A 164 VGEPTAVDKLGDMIKNGRRGSLSGNLTVKGKQGHIAYPHLAINPVHTFAPALLELTQEVWDEGNEYFPPTSFQISNINGG 243 (393)
T ss_dssp ECCCCBSSSTTSEEECEECEEEEEEEEEECBCEETTCGGGCBCHHHHHHHHHHHHHHCCCCCCCSSCCCCEEEEEEEEEC
T ss_pred EeCCCCcccCCceeEEeeeeEEEEEEEEEccCcccCCCccCCCHHHHHHHHHHHhhcccccccccccCCCeEEEeeEcCC
Confidence
Q ss_pred --CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccC-CCCcccCCHHHHHHHHHHHHhh
Q 045912 135 --AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFP-LIPAALDNDSLYLLVERVGKSL 211 (218)
Q Consensus 135 --~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~-~~p~~~~d~~l~~~l~~~~~~~ 211 (218)
+.|+||++|++.+|+|+.+.+..+++.++|+++++. .++++++++ .. ..|...+++++++.+.+++++.
T Consensus 244 ~~~~NviP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~----~~~~~~~~~----~~~~~p~~~~~~~l~~~~~~~~~~~ 315 (393)
T 1vgy_A 244 TGATNVIPGELNVKFNFRFSTESTEAGLKQRVHAILDK----HGVQYDLQW----SCSGQPFLTQAGKLTDVARAAIAET 315 (393)
T ss_dssp CSCTTEECSEEEEEEEEEECTTSCHHHHHHHHHHHHHH----TTCCEEEEE----EEEECCEECCSSHHHHHHHHHHHHH
T ss_pred CCCCcccCCeEEEEEEEecCCCCCHHHHHHHHHHHHHH----hCCCeEEEE----ecCCCcccCCCcHHHHHHHHHHHHH
Confidence 469999999999999999999999999999988763 477777776 32 2344567889999999999888
Q ss_pred cCCC
Q 045912 212 LGPE 215 (218)
Q Consensus 212 ~G~~ 215 (218)
+|.+
T Consensus 316 ~g~~ 319 (393)
T 1vgy_A 316 CGIE 319 (393)
T ss_dssp HSSC
T ss_pred cCCC
Confidence 7764
No 13
>2zog_A Cytosolic non-specific dipeptidase; metallopeptidase, protein-inhibitor complex, CNDP2, CNDP DIP 2, bestatin, L-carnosine, carnosinase, Zn; HET: BES; 1.70A {Mus musculus} PDB: 2zof_A*
Probab=99.97 E-value=4.2e-29 Score=217.60 Aligned_cols=201 Identities=11% Similarity=0.074 Sum_probs=169.6
Q ss_pred HHHHHHHHHhHHHHHHHHHHHHhCCCCCCCh------HHHHHHHHHHHHhcCCceeecC--------CC-----ceEEEE
Q 045912 11 DQILIETERDKNWLISIRRQIHENPELRFEV------HNTNALIRSELDKLGITYSCPL--------VK-----TGIVAK 71 (218)
Q Consensus 11 ~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E------~~~a~~i~~~L~~~G~~~~~~~--------~~-----~~via~ 71 (218)
+++.++++++.+++++++++|++|||+|++| .++++||+++|+++|+++++.. ++ +||+|+
T Consensus 9 ~~~~~~~~~~~~~~~~~l~~l~~~ps~s~~e~~~~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~~~~~~~~~~~~v~a~ 88 (479)
T 2zog_A 9 KAVFQYIDENQDRYVKKLAEWVAIQSVSAWPEKRGEIRRMMEVAAADVQRLGGSVELVDIGKQKLPDGSEIPLPPILLGK 88 (479)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHSCCBTTCGGGHHHHHHHHHHHHHHHHHTTCEEEEECCCEEECTTSCEEECCCEEEEE
T ss_pred HHHHHHHHHhHHHHHHHHHHHhcCCCccCCcccchHHHHHHHHHHHHHHHcCCeEEEeeccccccCCCcccCCCCEEEEE
Confidence 5688899999999999999999999999987 7999999999999999987642 23 899999
Q ss_pred ecCC-CCcEEEEEeeCCCCCccc---cCCCCcccc-CCCcccccC-Cc--HHHHHHHHHHHHHHhhcccCC---------
Q 045912 72 IGSG-SHPFIALRADMDALPLQE---LVNWEHKSK-IDGKMHACG-HD--APTTMLLGEAKLLHRRKDQLN--------- 134 (218)
Q Consensus 72 ~~~~-~~~~i~~~~h~D~vp~~~---~~~~pf~~~-~~g~~~~~G-~d--~~~a~ll~aa~~L~~~~~~~~--------- 134 (218)
++++ .+|+|+|+|||||||.++ |+.+||.+. .+|++|||| || +|+|++|++++.|++.+..++
T Consensus 89 ~~~~~~~~~i~l~aH~D~vp~~~~~~w~~~Pf~~~~~~g~l~grGa~D~K~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~ 168 (479)
T 2zog_A 89 LGSDPQKKTVCIYGHLDVQPAALEDGWDSEPFTLVEREGKLYGRGSTDDKGPVAGWMNALEAYQKTGQEIPVNLRFCLEG 168 (479)
T ss_dssp ECCCTTSCEEEEEEECCBCCCCGGGTCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTTCCCSSEEEEEEES
T ss_pred ecCCCCCCeEEEEEecCCCCCCccccCcCCCCcceeECCEEEeeccccChHHHHHHHHHHHHHHHhCCCCCCcEEEEEec
Confidence 9754 368999999999999854 678899986 589999999 67 899999999999987653322
Q ss_pred --------------------------------------------------------------------------------
Q 045912 135 -------------------------------------------------------------------------------- 134 (218)
Q Consensus 135 -------------------------------------------------------------------------------- 134 (218)
T Consensus 169 ~EE~g~~Ga~~~~~~~~~~~~~~~d~~i~~e~~~~~~~~~~i~~~~~G~~~~~i~v~G~~~~~Hs~~~g~~ai~~~~~~i 248 (479)
T 2zog_A 169 MEESGSEGLDELIFAQKDKFFKDVDYVCISDNYWLGKNKPCITYGLRGICYFFIEVECSDKDLHSGVYGGSVHEAMTDLI 248 (479)
T ss_dssp CGGGTCTTHHHHHHHTTTTTTTTCCEEEECCCBCSSSSSCEEEEEECEEEEEEEEEECCSSCEEHHHHTTTSCCHHHHHH
T ss_pred ccccCCccHHHHHHhhhhhhcccCCEEEEeCCCcCCCCCeEEEEecceEEEEEEEEEeCCCCCccCCCCCCccCHHHHHH
Confidence
Q ss_pred --------C-----------------------------------------------------------------------
Q 045912 135 --------A----------------------------------------------------------------------- 135 (218)
Q Consensus 135 --------~----------------------------------------------------------------------- 135 (218)
.
T Consensus 249 ~~l~~l~~~~g~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~v~~i~gg~~ 328 (479)
T 2zog_A 249 SLMGCLVDKKGKILIPGINDAVAPVTDEEHALYDHIDFDMEEFAKDVGAETLLHSCKKDILMHRWRYPSLSLHGIEGAFS 328 (479)
T ss_dssp HHHTTSBCTTSCBCSTTTTTTSCCCCHHHHHHTSSCCCCHHHHHHHHTCSSCSCSSHHHHHHHHHTSCEEEEEEEESSCC
T ss_pred HHHHhcCCCCCCEecCchhccCCCCCHHHHHHHHhCCCCHHHHHHhcCCccccccchHHHHHHhhcCCCeEEeeeecCCc
Confidence 1
Q ss_pred ----CCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHh--CCeEEEEeeecccCCCCccc--CCHHHHHHHHHH
Q 045912 136 ----ADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVH--RCNAYVDFQVEEFPLIPAAL--DNDSLYLLVERV 207 (218)
Q Consensus 136 ----~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~--g~~~~i~~~~~~~~~~p~~~--~d~~l~~~l~~~ 207 (218)
.|+||++|++.+|+|+.+.+..+.+.++|+++++.++..+ ++.+++++ ...+|++. .|+++++.++++
T Consensus 329 g~~~~NvIP~~a~~~~~~R~~~~~~~~~v~~~i~~~~~~~~~~~~~~~~~~~~~----~~~~p~~~~~~d~~~~~~~~~a 404 (479)
T 2zog_A 329 GSGAKTVIPRKVVGKFSIRLVPDMIPEVVSEQVSSYLSKKFAELQSPNKFKVYM----GHGGKPWVSDFNHPHYQAGRRA 404 (479)
T ss_dssp SSSCCCEECSEEEEEEEEEECTTCCHHHHHHHHHHHHHHHHHTTCCCSEEEEEE----EEEECCEECCTTSHHHHHHHHH
T ss_pred CCCCccccCCceEEEEEEEeCCCCCHHHHHHHHHHHHHHhhhccCCCceEEEEe----cCCCCceecCCCCHHHHHHHHH
Confidence 1789999999999999999999999999999999887665 56777776 44566644 477899999999
Q ss_pred HHhhcCCC
Q 045912 208 GKSLLGPE 215 (218)
Q Consensus 208 ~~~~~G~~ 215 (218)
+++++|.+
T Consensus 405 ~~~~~g~~ 412 (479)
T 2zog_A 405 LKTVFGVE 412 (479)
T ss_dssp HHHHHSSC
T ss_pred HHHHhCCC
Confidence 99887765
No 14
>3ct9_A Acetylornithine deacetylase; NP_812461.1, A putative zinc peptidase, peptidase family M20 structural genomics; 2.31A {Bacteroides thetaiotaomicron vpi-5482}
Probab=99.97 E-value=5.4e-30 Score=215.55 Aligned_cols=180 Identities=13% Similarity=0.137 Sum_probs=145.5
Q ss_pred HHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecC-C-CCcEEEEEeeCCCCCccc
Q 045912 16 ETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGS-G-SHPFIALRADMDALPLQE 93 (218)
Q Consensus 16 ~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~-~-~~~~i~~~~h~D~vp~~~ 93 (218)
.++++++++++++++||+|||+|++|.++++||.++|+++|++++.. .+|++|++++ + ++|+|+|+|||||||.++
T Consensus 5 ~i~~~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~g~~~~~~--~~nv~a~~~g~~~~~~~i~l~aH~D~vp~~~ 82 (356)
T 3ct9_A 5 DIPTMTAEAVSLLKSLISIPSISREETQAADFLQNYIEAEGMQTGRK--GNNVWCLSPMFDLKKPTILLNSHIDTVKPVN 82 (356)
T ss_dssp CHHHHHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHHHHTTCCEEEE--TTEEEEECSSCCTTSCEEEEEEECCBCCCC-
T ss_pred cHhHHHHHHHHHHHHHhcCCCCCCChHHHHHHHHHHHHHCCCeEEEE--eeeEEEEEecCCCCCCeEEEEccccccCCCC
Confidence 35667788999999999999999999999999999999999998765 7899999954 3 368999999999999875
Q ss_pred -cCCCCccccC-CCcccccCC-c--HHHHHHHHHHHHHHhhccc------------C-C---------------------
Q 045912 94 -LVNWEHKSKI-DGKMHACGH-D--APTTMLLGEAKLLHRRKDQ------------L-N--------------------- 134 (218)
Q Consensus 94 -~~~~pf~~~~-~g~~~~~G~-d--~~~a~ll~aa~~L~~~~~~------------~-~--------------------- 134 (218)
|+.+||.+.. +|++||||| | +++|++|++++.|++.+.. . .
T Consensus 83 ~w~~~p~~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~~~~~v~~~~~~~EE~~g~~G~~~~~~~~~~~d~~i~~e 162 (356)
T 3ct9_A 83 GWRKDPFTPREENGKLYGLGSNDAGASVVSLLQVFLQLCRTSQNYNLIYLASCEEEVSGKEGIESVLPGLPPVSFAIVGE 162 (356)
T ss_dssp ------CCCEECSSEEESTTTTTTHHHHHHHHHHHHHHTTSCCSSEEEEEEECCGGGTCTTTHHHHGGGSCCCSEEEECC
T ss_pred CCCCCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHhcCCCCCEEEEEEeCcccCCccCHHHHHhhCCCCCEEEEcC
Confidence 6889999874 799999999 6 6899999999999865310 0 0
Q ss_pred ------------------------------------------------------------------------CCCccCCe
Q 045912 135 ------------------------------------------------------------------------AADVISPR 142 (218)
Q Consensus 135 ------------------------------------------------------------------------~~NvIPd~ 142 (218)
+.|+||++
T Consensus 163 p~~~~i~~~~~G~~~~~i~~~G~~~Ha~~p~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~vg~i~gG~~~NviP~~ 242 (356)
T 3ct9_A 163 PTEMQPAIAEKGLMVLDVTATGKAGHAARDEGDNAIYKVLNDIAWFRDYRFEKESPLLGPVKMSVTVINAGTQHNVVPDK 242 (356)
T ss_dssp SBTTCCEEEECCCEEEEEEEECBCCBTTSSCCBCTTGGGHHHHHHHHHCCCSCCBTTTBSCEEEEEEEEECSSTTBCCSE
T ss_pred CCCceEEEeeeEEEEEEEEEECCCcccCCCCCCCHHHHHHHHHHHHHhhhcccccccCCCCcEEeeEEecCCcCCcCCCc
Confidence 68999999
Q ss_pred EEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeeccc-CCCCcc--cCCHHHHHHHHHHHHh
Q 045912 143 AEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEF-PLIPAA--LDNDSLYLLVERVGKS 210 (218)
Q Consensus 143 a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~-~~~p~~--~~d~~l~~~l~~~~~~ 210 (218)
|++.+|+|+.+.+..+++.++|+++++. ++++ . ..+|+. .+++++++.+++++++
T Consensus 243 a~~~~~iR~~~~~~~~~~~~~i~~~~~~---------~~~~----~~~~~~~~~~~~~~~l~~~~~~~~~~ 300 (356)
T 3ct9_A 243 CTFVVDIRSNELYSNEDLFAEIRKHIAC---------DAKA----RSFRLNSSRIDEKHPFVQKAVKMGRI 300 (356)
T ss_dssp EEEEEEEECCTTCCHHHHHHHHHHHCCS---------EEEE----SCSCSCCEECCTTSHHHHHHHHTTCC
T ss_pred eEEEEEEeeCCCCCHHHHHHHHHHHhhC---------eEEE----eeccCCCCCCCCCCHHHHHHHHHhcC
Confidence 9999999999999999999999988753 4444 3 345554 3677899988877654
No 15
>3tx8_A Succinyl-diaminopimelate desuccinylase; peptidase, structural genomics, joint center for structural JCSG; 2.97A {Corynebacterium glutamicum}
Probab=99.96 E-value=2.2e-29 Score=212.61 Aligned_cols=179 Identities=15% Similarity=0.149 Sum_probs=142.4
Q ss_pred hHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCc-eeecCCCceEEEEecCCCCcEEEEEeeCCCCCccccCCCC
Q 045912 20 DKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGIT-YSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQELVNWE 98 (218)
Q Consensus 20 ~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~-~~~~~~~~~via~~~~~~~~~i~~~~h~D~vp~~~~~~~p 98 (218)
..+++++++++||+|||+|++|.++++||.++|+++||+ ++....++|++|+++++++|+|+|+|||||||+++ ..|
T Consensus 11 ~~~~~~~~~~~l~~~ps~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~~~a~~~~~~~~~v~l~~H~D~vp~~~--~~~ 88 (369)
T 3tx8_A 11 LLGDPIVLTQRLVDIPSPSGQEKQIADEIEDALRNLNLPGVEVFRFNNNVLARTNRGLASRVMLAGHIDTVPIAD--NLP 88 (369)
T ss_dssp CCSCHHHHHHHHHSSCCBTTCTHHHHHHHHHHHHTTTCTTCEEEEETTEEEEECCCCCSCEEEEEEECCBSCCCS--CCS
T ss_pred cHHHHHHHHHHHhcCCCCCccHHHHHHHHHHHHHhcCCCCcEEeccCCcEEEEecCCCCCeEEEEcccCccCCCC--CCC
Confidence 356789999999999999999999999999999999884 44333468999999765569999999999999875 344
Q ss_pred ccccCCCcccccCC-c--HHHHHHHHHHHHHHhhcccCC-----------------------------------------
Q 045912 99 HKSKIDGKMHACGH-D--APTTMLLGEAKLLHRRKDQLN----------------------------------------- 134 (218)
Q Consensus 99 f~~~~~g~~~~~G~-d--~~~a~ll~aa~~L~~~~~~~~----------------------------------------- 134 (218)
+.. .+|++||||| | +|+|++|++++.|++.. .++
T Consensus 89 ~~~-~~g~~~g~G~~D~K~~~a~~l~a~~~l~~~~-~~~~~v~~~~~~~EE~g~~~~G~~~~~~~~~~~~~~~~~i~~ep 166 (369)
T 3tx8_A 89 SRV-EDGIMYGCGTVDMKSGLAVYLHTFATLATST-ELKHDLTLIAYECEEVADHLNGLGHIRDEHPEWLAADLALLGEP 166 (369)
T ss_dssp CEE-CSSEEESSSTTTTHHHHHHHHHHHHHHTSCT-TCCSEEEEEEECCCSSCTTSCHHHHHHHHCGGGGCCSEEEECCC
T ss_pred CeE-ECCEEEcCCcccchHHHHHHHHHHHHHHhhc-CCCccEEEEEEeccccCcccccHHHHHHhcccccCCCEEEEeCC
Confidence 544 3799999999 7 89999999999997531 111
Q ss_pred --------------------------------------------------------------------------CCCccC
Q 045912 135 --------------------------------------------------------------------------AADVIS 140 (218)
Q Consensus 135 --------------------------------------------------------------------------~~NvIP 140 (218)
+.|+||
T Consensus 167 ~~~~i~~~~~G~~~~~i~v~G~~~Ha~~p~~g~nAi~~~a~~i~~l~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~NvIP 246 (369)
T 3tx8_A 167 TGGWIEAGCQGNLRIKVTAHGVRAHSARSWLGDNAMHKLSPIISKVAAYKAAEVNIDGLTYREGLNIVFCESGVANNVIP 246 (369)
T ss_dssp CTTCEEESBCEEEEEEEEEECBCCBTTSGGGSBCTGGGGHHHHHHHHHCCCCEEEETTEEEECEEEEEEEEECSBTTBCC
T ss_pred CCCceeeecceEEEEEEEEeeeccccCCCCcCcCHHHHHHHHHHHHHhhcccccccCCcccCceEEEEEEECCCCCcccc
Confidence 579999
Q ss_pred CeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCCCCcccCCHHHHHHHHHH
Q 045912 141 PRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAALDNDSLYLLVERV 207 (218)
Q Consensus 141 d~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~p~~~~d~~l~~~l~~~ 207 (218)
++|++.+|+|+.+.+..+++.++|+++++..+ .++++++++.. ...+++..+++. ++.+.++
T Consensus 247 ~~a~~~~diR~~~~~~~~~v~~~i~~~~~~~~-~~g~~~~~~~~---~~~~~~~~~~~~-~~~~~~~ 308 (369)
T 3tx8_A 247 DLAWMNLNFRFAPNRDLNEAIEHVVETLELDG-QDGIEWAVEDG---AGGALPGLGQQV-TSGLIDA 308 (369)
T ss_dssp SEEEEEEEEEECTTSCHHHHHHHHHHHTTTTT-STTEEEEEEEE---ECCBCCCTTSHH-HHHHHHH
T ss_pred CcEEEEEEEecCCCCCHHHHHHHHHHHHHhcc-cCCeEEEEEec---CCCCCCCCCCHH-HHHHHHH
Confidence 99999999999999999999999999998776 56777777431 344555555554 4444443
No 16
>2pok_A Peptidase, M20/M25/M40 family; M20 family peptidase, metallo protein, MCSG, structural GENO PSI-2, protein structure initiative; HET: BGC; 1.90A {Streptococcus pneumoniae}
Probab=99.96 E-value=1.4e-27 Score=208.29 Aligned_cols=199 Identities=11% Similarity=0.088 Sum_probs=164.2
Q ss_pred HHHHHHHHHHhHH-HHHHHHHHHHhCCCCCCCh---HHHHHHHHHHHHhcCCceeec--CCCceEEEEecC--CCCcEEE
Q 045912 10 ADQILIETERDKN-WLISIRRQIHENPELRFEV---HNTNALIRSELDKLGITYSCP--LVKTGIVAKIGS--GSHPFIA 81 (218)
Q Consensus 10 ~~~i~~~i~~~~~-~~~~~~~~L~~~pe~~~~E---~~~a~~i~~~L~~~G~~~~~~--~~~~~via~~~~--~~~~~i~ 81 (218)
++++.++++++.+ ++++++++|++|||++++| .++++||+++|+++|++++.. .+++||+|++++ ..+|+|+
T Consensus 31 m~~~~~~~~~~~~~~~~~~l~~l~~ips~s~~e~~~~~~~~~l~~~l~~~G~~~~~~~~~~~~~v~a~~~g~~~~~~~i~ 110 (481)
T 2pok_A 31 QEQIEKFEKDHVAQHYFEVLRTLISKKSVFAQQVGLKEVANYLGEIFKRVGAEVEIDESYTAPFVMAHFKSSRPDAKTLI 110 (481)
T ss_dssp HHHHHHHHHCHHHHHHHHHHHHHHHSCCCGGGCTTHHHHHHHHHHHHHHTTCEEEEECSSSSCEEEEEECCSSTTCCEEE
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHHcCCCcCCCCHHHHHHHHHHHHHHHHcCCEEEEecCCCCcEEEEEecCCCCCCCeEE
Confidence 4678999999999 9999999999999999887 999999999999999998764 346899999954 2358999
Q ss_pred EEeeCCCCCccc---cCCCCcccc-CCCcccccCC---cHHHHHHHHHHHHHHhhcccCC--------------------
Q 045912 82 LRADMDALPLQE---LVNWEHKSK-IDGKMHACGH---DAPTTMLLGEAKLLHRRKDQLN-------------------- 134 (218)
Q Consensus 82 ~~~h~D~vp~~~---~~~~pf~~~-~~g~~~~~G~---d~~~a~ll~aa~~L~~~~~~~~-------------------- 134 (218)
|+|||||||.++ |+.+||.+. .+|++||||+ ++++|++|++++.|++.+..++
T Consensus 111 l~aH~D~vp~~~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~~~~~~EE~g~~g~~~ 190 (481)
T 2pok_A 111 FYNHYDTVPADGDQVWTEDPFTLSVRNGFMYGRGVDDDKGHITARLSALRKYMQHHDDLPVNISFIMEGAEESASTDLDK 190 (481)
T ss_dssp EEEECCCCCSCSSCCCSSCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHTCSSCSSEEEEEEESCGGGTTTTHHH
T ss_pred EEEeccCcCCCCccccccCCCCceeeCCeEEccccccCcHHHHHHHHHHHHHHHhcCCCCCCEEEEEecccccCchhHHH
Confidence 999999999865 566799985 4899999996 4999999999999987632222
Q ss_pred ----------------------------------------------------------------------------C---
Q 045912 135 ----------------------------------------------------------------------------A--- 135 (218)
Q Consensus 135 ----------------------------------------------------------------------------~--- 135 (218)
.
T Consensus 191 ~~~~~~~~~~~~d~~i~~~~~~~~~~~~~i~~~~~G~~~~~i~v~G~~g~~Hss~p~~g~nAi~~~a~~i~~l~~~~~~i 270 (481)
T 2pok_A 191 YLEKHADKLRGADLLVWEQGTKNALEQLEISGGNKGIVTFDAKVKSADVDIHSSYGGVVESAPWYLLQALQSLRAADGRI 270 (481)
T ss_dssp HHHHHHHHHTTCSEEECSCCBBCTTSCEEEECCBCEEEEEEEEEECSSSCEEGGGTTTBCCHHHHHHHHHHHTBCTTSCB
T ss_pred HHHHhHhhccCCCEEEECCCCccCCCCeeEEEecceeEEEEEEEecCCCCccccCCCCCCCHHHHHHHHHHHhhCCCCce
Confidence 2
Q ss_pred -------------------------------------------------------------------------CCccCCe
Q 045912 136 -------------------------------------------------------------------------ADVISPR 142 (218)
Q Consensus 136 -------------------------------------------------------------------------~NvIPd~ 142 (218)
.|+||++
T Consensus 271 ~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~t~~vg~i~gG~~~~~~~NvIP~~ 350 (481)
T 2pok_A 271 LVEGLYEEVQEPNEREMALLETYGQRNPEEVSRIYGLELPLLQEERMAFLKRFFFDPALNIEGIQSGYQGQGVKTILPAE 350 (481)
T ss_dssp CCTTTGGGSCCCCHHHHHHHHHHSCSCGGGHHHHHTCCSCCSSCSHHHHHHHHHHSCEEEEEEEEEECCSSSCCCEECSE
T ss_pred eccchhhcCCCCCHHHHHHHHhcCcccHHHHHHhhCcccccccccchhHHHHHhhcCeEeEEeeecCCCCCCCCeeccCe
Confidence 1589999
Q ss_pred EEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCCCCccc--CCHHHHHHHHHHHHhhcCCC
Q 045912 143 AEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAAL--DNDSLYLLVERVGKSLLGPE 215 (218)
Q Consensus 143 a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~p~~~--~d~~l~~~l~~~~~~~~G~~ 215 (218)
|++.+|+|+.+.+..+.+.++|+++++..+. .++++++.. .+|+.. .|+++++.+++++++++|.+
T Consensus 351 a~~~~diR~~~~~~~~~v~~~i~~~~~~~~~-~~~~v~~~~------~~p~~~~~~d~~l~~~~~~a~~~~~g~~ 418 (481)
T 2pok_A 351 ASAKLEVRLVPGLEPHDVLEKIRKQLDKNGF-DKVELYYTL------GEMSYRSDMSAPAILNVIELAKKFYPQG 418 (481)
T ss_dssp EEEEEEEEECTTCCHHHHHHHHHHHHHHTTC-TTEEEEEEE------EECCBCCCSCSHHHHHHHHHHTTTCTTC
T ss_pred eEEEEEEEeCCCCCHHHHHHHHHHHHHhhCC-CceEEEEcc------CCCcccCCCCCHHHHHHHHHHHHHcCCC
Confidence 9999999999999999999999999987653 455554432 345543 57899999999998887765
No 17
>2f7v_A Aectylcitrulline deacetylase; alpha/beta, hydrolase; 1.75A {Xanthomonas campestris} PDB: 2f8h_A
Probab=99.95 E-value=6.4e-28 Score=203.75 Aligned_cols=186 Identities=14% Similarity=0.112 Sum_probs=152.0
Q ss_pred HHHhHHHHHHHHHHHHhCCCCC--C---ChHHHHHHHHHHHHhcCCceeec---CCCceEEEEecCCCCcEEEEEeeCCC
Q 045912 17 TERDKNWLISIRRQIHENPELR--F---EVHNTNALIRSELDKLGITYSCP---LVKTGIVAKIGSGSHPFIALRADMDA 88 (218)
Q Consensus 17 i~~~~~~~~~~~~~L~~~pe~~--~---~E~~~a~~i~~~L~~~G~~~~~~---~~~~~via~~~~~~~~~i~~~~h~D~ 88 (218)
++++.+++++++++|++|||++ + +|.++++||.++|+ ||+++.. .+++|++| +++. |+|+|+|||||
T Consensus 4 ~~~~~~~~~~~l~~l~~ips~s~~~~~~~e~~~~~~l~~~l~--G~~~~~~~~~~~~~~~~a-~~g~--~~i~l~~H~D~ 78 (369)
T 2f7v_A 4 MTDLLASTLEHLETLVSFDTRNPPRAIAAEGGIFDYLRAQLP--GFQVEVIDHGDGAVSLYA-VRGT--PKYLFNVHLDT 78 (369)
T ss_dssp CCHHHHHHHHHHHHHHHSCCBTTTTCCCSSSHHHHHHHTTCT--TCEEEEEECSTTCEEEEE-EESC--CSEEEEEECCB
T ss_pred hhhhhHHHHHHHHHHhCCCCcCCCCCCccHHHHHHHHHHHhC--CCceEEEEcCCCceEEEE-EcCC--CeEEEEeeecc
Confidence 4566788999999999999998 8 99999999999999 9998663 24689999 8643 78999999999
Q ss_pred CCccc-cCCCCcccc-CCCcccccCC-c--HHHHHHHHHHHHHHhh-------cccC-C---------------------
Q 045912 89 LPLQE-LVNWEHKSK-IDGKMHACGH-D--APTTMLLGEAKLLHRR-------KDQL-N--------------------- 134 (218)
Q Consensus 89 vp~~~-~~~~pf~~~-~~g~~~~~G~-d--~~~a~ll~aa~~L~~~-------~~~~-~--------------------- 134 (218)
||.++ |+.+||++. .+|++||||| | +++|++|.+++.+... ..+. .
T Consensus 79 vp~~~~w~~~pf~~~~~~g~l~grG~~D~k~g~a~~l~a~~~~~~~v~~~~~~~EE~~g~~G~~~~~~~~~~~d~~i~~e 158 (369)
T 2f7v_A 79 VPDSPHWSADPHVMRRTEDRVIGLGVCDIKGAAAALVAAANAGDGDAAFLFSSDEEANDPRCIAAFLARGLPYDAVLVAE 158 (369)
T ss_dssp CCCCSSCSSCTTSCEECSSEEECTTTTTTHHHHHHHHHHHTTCCCCEEEEEESCTTSSSCCHHHHHHTTCCCCSEEEECC
T ss_pred cCCCCCCCCCCCCcEEECCEEEecccccccHHHHHHHHHHhcCCCCEEEEEEeCcccCCCcCHHHHHhcCCCCCEEEECC
Confidence 99986 899999986 4899999998 4 8888888877652100 0001 0
Q ss_pred -----------------------------------------------------------------------------CCC
Q 045912 135 -----------------------------------------------------------------------------AAD 137 (218)
Q Consensus 135 -----------------------------------------------------------------------------~~N 137 (218)
+.|
T Consensus 159 ~~~~~i~~~~~g~~~~~i~v~G~~~Ha~~p~~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~vg~i~gG~~~N 238 (369)
T 2f7v_A 159 PTMSEAVLAHRGISSVLMRFAGRAGHASGKQDPAASALHQAMRWGGKALDHVESLAHARFGGLTGLRFNIGRVDGGIKAN 238 (369)
T ss_dssp CSTTCBBCCBCCEEEEEEEEECCCC------CTTSCHHHHHHHHHHHHHHHHHHTTTCEETTEESCEEEEEEEEECSSTT
T ss_pred CCCCcceeecCceEEEEEEEeeeCcccCCCCcCCCCHHHHHHHHHHHHHhhhhhhcccccCcccCCceEEEEeecCCCCC
Confidence 568
Q ss_pred ccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeeccc-CCCCcccCC-HHHHHHHHHHHHhhcCCC
Q 045912 138 VISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEF-PLIPAALDN-DSLYLLVERVGKSLLGPE 215 (218)
Q Consensus 138 vIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~-~~~p~~~~d-~~l~~~l~~~~~~~~G~~ 215 (218)
+||++|++.+|+|+.+.+..+++.++|+++++.. ++++++++ . ..+||+.++ +++++.+++++++++|.+
T Consensus 239 viP~~a~~~~diR~~~~~~~~~~~~~i~~~~~~~----~~~~~~~~----~~~~~~~~~~~~~~l~~~~~~a~~~~~g~~ 310 (369)
T 2f7v_A 239 MIAPAAELRFGFRPLPSMDVDGLLATFAGFADPA----AAHFEETF----RGPSLPSGDIARAEERRLAARDVADALDLP 310 (369)
T ss_dssp SCCSEEEEEEEEECCTTCCHHHHHHHHHHTCSSC----CSEEEEEE----EECCBSCSSHHHHHHHHHHHHHHHHHTTCC
T ss_pred cCCCceEEEEEEeeCCCCCHHHHHHHHHHHHHHh----cCceEEEe----ccCCCCccCCCCCHHHHHHHHHHHHhhCCC
Confidence 9999999999999999999999999999887543 46777776 4 467888777 899999999999888764
No 18
>3ife_A Peptidase T; metallopeptidase, aminopeptidase, hydro metal-binding, metalloprotease, protease; HET: SUC; 1.55A {Bacillus anthracis}
Probab=99.94 E-value=7.9e-26 Score=194.79 Aligned_cols=192 Identities=14% Similarity=0.041 Sum_probs=155.1
Q ss_pred HHhHHHHHHHHHHHHhCCCCCC----------ChHHHHHHHHHHHHhcCCc-eeecCCCceEEEEecC-C--CCcEEEEE
Q 045912 18 ERDKNWLISIRRQIHENPELRF----------EVHNTNALIRSELDKLGIT-YSCPLVKTGIVAKIGS-G--SHPFIALR 83 (218)
Q Consensus 18 ~~~~~~~~~~~~~L~~~pe~~~----------~E~~~a~~i~~~L~~~G~~-~~~~~~~~~via~~~~-~--~~~~i~~~ 83 (218)
+..++++++++++|++|||+|+ +|.++++||.++|+++|++ ++.+ ...||+|++++ + .+|+|+|.
T Consensus 23 ~~~~~~~~~~l~~lv~i~s~s~~~~~~~~~~~~e~~~~~~l~~~l~~~G~~~~~~d-~~~nv~a~~~g~~~~~~~~v~l~ 101 (434)
T 3ife_A 23 NAMKEELIERFTRYVKIDTQSNEDSHTVPTTPGQIEFGKLLVEELKEVGLTEVTMD-DNGYVMATLPANTDKDVPVIGFL 101 (434)
T ss_dssp HHHHHHHHHHHHHHHTSCCBCCTTCCSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTSCEEEEECCBSSSCCCCEEEE
T ss_pred HHHHHHHHHHHHhhEEeeccCCCccCCCCCCHHHHHHHHHHHHHHHHcCCceEEEC-CCcEEEEEeCCCCCCCCCeEEEE
Confidence 3455789999999999999988 5799999999999999997 7765 36799999954 3 25899999
Q ss_pred eeCCCCCc-cccCCCCccccC-----------------------------CCcccccCC-------cHHHHHHHHHHHHH
Q 045912 84 ADMDALPL-QELVNWEHKSKI-----------------------------DGKMHACGH-------DAPTTMLLGEAKLL 126 (218)
Q Consensus 84 ~h~D~vp~-~~~~~~pf~~~~-----------------------------~g~~~~~G~-------d~~~a~ll~aa~~L 126 (218)
|||||||. ..|+..||.... +|++||+|. ++++|++|++++.|
T Consensus 102 ~H~DtVp~~~~~~~~p~~~~~~dg~~i~l~~~~~~~~~~~~~~~~~~~~g~~~i~grG~t~~~~D~K~gva~~l~a~~~L 181 (434)
T 3ife_A 102 AHLDTATDFTGKNVKPQIHENFDGNAITLNEELNIVLTPEQFPELPSYKGHTIITTDGTTLLGADDKAGLTEIMVAMNYL 181 (434)
T ss_dssp EECCBCTTSCCSSCCCEEETTCCSSCEEEETTTTEEECTTTCTTGGGGTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHH
T ss_pred EEcccCCCCCCCCCccEEeecCCCCceecccccccccChhhChhHHhhcCCcEEECCCccchhhhhHHHHHHHHHHHHHH
Confidence 99999996 345567775421 247788774 59999999999999
Q ss_pred HhhcccCC------------------------------------------------------------------------
Q 045912 127 HRRKDQLN------------------------------------------------------------------------ 134 (218)
Q Consensus 127 ~~~~~~~~------------------------------------------------------------------------ 134 (218)
++.+..++
T Consensus 182 ~~~~~~~~~~i~~if~~~EE~g~Ga~~~~~~~~~~d~~~~~d~~~~g~i~~~~~G~~~~~i~v~G~~~Hag~~P~~g~nA 261 (434)
T 3ife_A 182 IHNPQIKHGKIRVAFTPDEEIGRGPAHFDVEAFGASFAYMMDGGPLGGLEYESFNAAGAKLTFNGTNTHPGTAKNKMRNA 261 (434)
T ss_dssp HTCTTSCBCCEEEEEESCGGGTCTGGGCCHHHHCCSEEEECCCCSTTEEECCBCEEEEEEEEEECBCCCGGGCTTTCBCH
T ss_pred HhCCCCCCCCEEEEEECCcccChHHHHhhhhhcCCCEEEEecCCCCCceeecCCCeEEEEEEEEEEecCCCCCcccchhH
Confidence 87643222
Q ss_pred ------------------------------CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhC-CeEEEEe
Q 045912 135 ------------------------------AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHR-CNAYVDF 183 (218)
Q Consensus 135 ------------------------------~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g-~~~~i~~ 183 (218)
..|+||++|++.+|+|+.+.+..+++.++|++++++++..++ +++++++
T Consensus 262 i~~aa~~i~~l~~~~~~~~~~~~~g~i~~g~~n~iP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~~v~~ 341 (434)
T 3ife_A 262 TKLAMEFNGHLPVEEAPEYTEGYEGFYHLLSLNGDVEQSKAYYIIRDFDRKNFEARKNTIENIVKQMQEKYGQDAVVLEM 341 (434)
T ss_dssp HHHHHHHHHTSCTTCSGGGCCTTCCEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHCGGGEEEEE
T ss_pred HHHHHHHHHhcccccCCCcceeeeEEEEeeeEeEecCeEEEEEEEecCCHHHHHHHHHHHHHHHHHHHHhcCCceEEEEE
Confidence 358999999999999999999999999999999999988888 5666665
Q ss_pred eecccCCCC----cccCCHHHHHHHHHHHHhhcCCC
Q 045912 184 QVEEFPLIP----AALDNDSLYLLVERVGKSLLGPE 215 (218)
Q Consensus 184 ~~~~~~~~p----~~~~d~~l~~~l~~~~~~~~G~~ 215 (218)
...++ ++.+|+++++.+++++++ +|.+
T Consensus 342 ----~~~~~~~~~~~~~d~~l~~~~~~a~~~-~G~~ 372 (434)
T 3ife_A 342 ----NDQYYNMLEKIEPVREIVDIAYEAMKS-LNIE 372 (434)
T ss_dssp ----EEEECCTHHHHGGGTHHHHHHHHHHHH-TTCC
T ss_pred ----eecccchhccccCCHHHHHHHHHHHHH-hCCC
Confidence 33333 357889999999999987 6754
No 19
>1lfw_A PEPV; hydrolase, dipeptidase; HET: AEP; 1.80A {Bacteria} SCOP: c.56.5.4 d.58.19.1
Probab=99.94 E-value=4e-25 Score=192.06 Aligned_cols=115 Identities=15% Similarity=0.097 Sum_probs=100.9
Q ss_pred HHHHHHHhHHHHHHHHHHHHhCCCCCCCh------------HHHHHHHHHHHHhcCCceeecCCCceEEEEecCCCCcEE
Q 045912 13 ILIETERDKNWLISIRRQIHENPELRFEV------------HNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFI 80 (218)
Q Consensus 13 i~~~i~~~~~~~~~~~~~L~~~pe~~~~E------------~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~~~~~i 80 (218)
+.++++++++++++++++|++|||+|++| .++++||.++|+++||+++.. +..++++.++.+ +|+|
T Consensus 5 ~~~~~~~~~~~~~~~l~~l~~ips~s~~~~~~~~~p~~~~~~~~~~~l~~~l~~~G~~~~~~-~~~~~~~~~g~~-~~~i 82 (470)
T 1lfw_A 5 FKELAEAKKDAILKDLEELIAIDSSEDLENATEEYPVGKGPVDAMTKFLSFAKRDGFDTENF-ANYAGRVNFGAG-DKRL 82 (470)
T ss_dssp HHHHHHTTHHHHHHHHHHHHTSCCBCCGGGCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE-TTTEEEEEECCC-SSEE
T ss_pred HHHHHHHhHHHHHHHHHHHcCCCCcCCCccccccCCCcHHHHHHHHHHHHHHHHcCCeEEEe-cCeEEEEEeCCC-CCeE
Confidence 67889999999999999999999999987 799999999999999998653 356788888533 5899
Q ss_pred EEEeeCCCCCccc-cCCCCcccc--CCCcccccC-Cc--HHHHHHHHHHHHHHhh
Q 045912 81 ALRADMDALPLQE-LVNWEHKSK--IDGKMHACG-HD--APTTMLLGEAKLLHRR 129 (218)
Q Consensus 81 ~~~~h~D~vp~~~-~~~~pf~~~--~~g~~~~~G-~d--~~~a~ll~aa~~L~~~ 129 (218)
+|+|||||||.++ |+.+||++. .+|++|||| || +++|++|++++.|++.
T Consensus 83 ~l~~H~D~vp~~~~w~~~Pf~~~~~~~g~l~grG~~D~K~~~a~~l~a~~~l~~~ 137 (470)
T 1lfw_A 83 GIIGHMDVVPAGEGWTRDPFKMEIDEEGRIYGRGSADDKGPSLTAYYGMLLLKEA 137 (470)
T ss_dssp EEEEECCBCCCCSCCSSCTTSCEECTTCEEESTTSSSSHHHHHHHHHHHHHHHHH
T ss_pred EEEEeecccCCCCCccCCCcceeEeeCCEEECCCcccChHHHHHHHHHHHHHHHc
Confidence 9999999999876 788999987 589999999 66 8999999999988754
No 20
>3khx_A Putative dipeptidase sacol1801; DAPE, metallopeptidase, hydrolase, metal-bindin metalloprotease, protease; 2.30A {Staphylococcus aureus} PDB: 3ki9_A 3khz_A
Probab=99.93 E-value=1.7e-25 Score=195.48 Aligned_cols=122 Identities=13% Similarity=0.141 Sum_probs=98.9
Q ss_pred CCchHHHHHHHHHHHHhHHHHHHHHHHHHhCCCCCCCh------------HHHHHHHHHHHHhcCCceeecCCCceEEEE
Q 045912 4 SLDEAFADQILIETERDKNWLISIRRQIHENPELRFEV------------HNTNALIRSELDKLGITYSCPLVKTGIVAK 71 (218)
Q Consensus 4 ~~~~~~~~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E------------~~~a~~i~~~L~~~G~~~~~~~~~~~via~ 71 (218)
|-...|+.++.++++++++++++++++|++|||++++| .++++||.++|+++||++++. .|+++.
T Consensus 16 ~~~~~m~~~i~~~i~~~~~~~~~~l~~lv~ips~s~~e~~~~~~p~g~~~~~~~~~l~~~l~~~G~~~~~~---~~~~~~ 92 (492)
T 3khx_A 16 PRGSHMASMWKEKVQQYEDQIINDLKGLLAIESVRDDAKASEDAPVGPGPRKALDYMYEIAHRDGFTTHDV---DHIAGR 92 (492)
T ss_dssp -------CTTHHHHHTTHHHHHHHHHHHHTSCCCCCSSSCCSSSTTCHHHHHHHHHHHHHHHHTTCEEEEE---TTTEEE
T ss_pred cCcchhHHHHHHHHHHhHHHHHHHHHHHhcCCCCCCCcccccccccchHHHHHHHHHHHHHHHcCCcceEe---CCEEEE
Confidence 44456777899999999999999999999999999987 599999999999999998764 355554
Q ss_pred ec-CCCCcEEEEEeeCCCCCccc-cCCCCcccc-CCCcccccCC-c--HHHHHHHHHHHHHHh
Q 045912 72 IG-SGSHPFIALRADMDALPLQE-LVNWEHKSK-IDGKMHACGH-D--APTTMLLGEAKLLHR 128 (218)
Q Consensus 72 ~~-~~~~~~i~~~~h~D~vp~~~-~~~~pf~~~-~~g~~~~~G~-d--~~~a~ll~aa~~L~~ 128 (218)
+. +..+|+|+|+|||||||.++ |+.+||++. .+|++||||+ | +++|++|+|++.|++
T Consensus 93 ~~~g~~~~~i~l~~H~D~vp~~~~w~~~Pf~~~~~~g~l~GrG~~D~Kg~~a~~l~a~~~l~~ 155 (492)
T 3khx_A 93 IEAGKGNDVLGILCHVDVVPAGDGWDSNPFEPVVTEDAIIARGTLDDKGPTIAAYYAIKILED 155 (492)
T ss_dssp EEEECSSCEEEEEEECCCCCCCSCCSSCTTSCEECSSEEESTTTTTTHHHHHHHHHHHHHHHH
T ss_pred EEeCCCCCEEEEEEeccCCCCCCCcccCCCceEEECCEEEecCCccCcHHHHHHHHHHHHHHH
Confidence 42 22358999999999999875 788999985 5899999997 4 899999999999874
No 21
>2rb7_A Peptidase, M20/M25/M40 family; YP_387682.1, CO-catalytic metallopeptidase, peptidase family M20/M25/M40, structural genomics; HET: MSE PGE PG4; 1.60A {Desulfovibrio desulfuricans subsp}
Probab=99.93 E-value=7.1e-26 Score=190.94 Aligned_cols=170 Identities=9% Similarity=0.061 Sum_probs=138.3
Q ss_pred HHHHHHHHHHHHhCCCCC---CChHHHHHHHHHHHHhcCCceeecCCCceEEEEec---CCCCcEEEEEeeCCCCCcccc
Q 045912 21 KNWLISIRRQIHENPELR---FEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIG---SGSHPFIALRADMDALPLQEL 94 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~---~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~---~~~~~~i~~~~h~D~vp~~~~ 94 (218)
.+++++++++||+|||+| ++|.++++||.++|+++|++++.. .+|+++.+. ++.+|+|+|+|||||||.
T Consensus 5 ~~~~~~~l~~l~~ips~s~~~~~e~~~~~~l~~~l~~~G~~~~~~--~~~~~~~~~~~~~~~~~~i~l~aH~D~vp~--- 79 (364)
T 2rb7_A 5 MQHIVELTSDLIRFPSMHSRPEQISRCAGFIMDWCAQNGIHAERM--DHDGIPSVMVLPEKGRAGLLLMAHIDVVDA--- 79 (364)
T ss_dssp HHHHHHHHHHHHTSCCCTTCHHHHHHHHHHHHHHHHHTTCCCEEE--EETTEEEEEECSBTTEEEEEEEEECCCCCC---
T ss_pred HHHHHHHHHHHHcCCCCCCCcchHHHHHHHHHHHHHHcCCeEEEe--cCCCceEEEEEcCCCCCeEEEECccCcCCC---
Confidence 567899999999999999 899999999999999999998764 367888874 233589999999999985
Q ss_pred CCCCccccC-CCcccccCC-c--HHHHHHHHHHHHHHhhcc-------c--CC---------------------------
Q 045912 95 VNWEHKSKI-DGKMHACGH-D--APTTMLLGEAKLLHRRKD-------Q--LN--------------------------- 134 (218)
Q Consensus 95 ~~~pf~~~~-~g~~~~~G~-d--~~~a~ll~aa~~L~~~~~-------~--~~--------------------------- 134 (218)
+.+||.+.. +|++||||| | +++|++|++++.|++.+. . +.
T Consensus 80 ~~~p~~~~~~~g~~~grG~~D~k~~~a~~l~a~~~l~~~~~~~~~~~g~~~v~~~~~~~EE~~g~~G~~~~~~~~~~d~~ 159 (364)
T 2rb7_A 80 EDDLFVPRVENDRLYGRGANDDKYAVALGLVMFRDRLNALKAAGRSQKDMALGLLITGDEEIGGMNGAAKALPLIRADYV 159 (364)
T ss_dssp CGGGGSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEEEESCGGGTSTTTHHHHGGGCEEEEE
T ss_pred CCCCCccEEECCEEEecccccccHHHHHHHHHHHHHHHhCCCCcccCCCccEEEEEEeccccCchhhHHHHHhcCCCCEE
Confidence 578999875 899999999 7 689999999999875421 1 11
Q ss_pred -----------------------------------------------------------------------------CCC
Q 045912 135 -----------------------------------------------------------------------------AAD 137 (218)
Q Consensus 135 -----------------------------------------------------------------------------~~N 137 (218)
+.|
T Consensus 160 i~~d~~~p~~i~~~~~G~~~~~i~v~G~~~Ha~~P~~g~nAi~~~~~~i~~l~~~~~~~~~~~~~~~~~vg~i~gG~~~N 239 (364)
T 2rb7_A 160 VALDGGNPQQVITKEKGIIDIKLTCTGKAAHGARPWMGVNAVDLLMEDYTRLKTLFAEENEDHWHRTVNLGRIRAGESTN 239 (364)
T ss_dssp EECSSSBTTEEEEEECEEEEEEEEEECBCEETTSGGGSBCHHHHHHHHHHHHHTTSCCCCTTCCSCEEEEEEEEECSCTT
T ss_pred EEccCCcccceEEEeeeEEEEEEEEEeecccCCCCCCCcCHHHHHHHHHHHHHhhccchhhcCCCceEEEEEEecCCcCc
Confidence 459
Q ss_pred ccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCCCCccc--CCHHHHHHHHHHHH
Q 045912 138 VISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAAL--DNDSLYLLVERVGK 209 (218)
Q Consensus 138 vIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~p~~~--~d~~l~~~l~~~~~ 209 (218)
+||++|++.+|+|+.+.+..+.+.++|+++++. +++ . . .++|+. .++++++.++++++
T Consensus 240 viP~~a~~~~~iR~~~~~~~~~i~~~i~~~~~~-------~v~--~----~-~~~~~~~~~~~~l~~~~~~~~~ 299 (364)
T 2rb7_A 240 KVPDVAEGWFNIRVTEHDDPGALIDKIRKTVSG-------TVS--I----V-RTVPVFLAADSPYTERLLALSG 299 (364)
T ss_dssp EECSEEEEEEEEEECTTSCHHHHHHHHHHHCSS-------EEE--E----E-EEECCEECCCCHHHHHHHHHHC
T ss_pred ccCcceEEEEEEeeCCCCCHHHHHHHHHHHhhh-------hEE--e----c-cCCccccCCCCHHHHHHHHHHH
Confidence 999999999999999999999999999988753 344 2 1 133332 35689999988886
No 22
>2qyv_A XAA-His dipeptidase; YP_718209.1, structural genomi center for structural genomics, JCSG, protein structure INI PSI-2, hydrolase; 2.11A {Haemophilus somnus 129PT}
Probab=99.93 E-value=1.5e-24 Score=189.42 Aligned_cols=104 Identities=14% Similarity=0.093 Sum_probs=86.8
Q ss_pred hHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecC--C--CCcEEEEEeeCCCCCcc---
Q 045912 20 DKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGS--G--SHPFIALRADMDALPLQ--- 92 (218)
Q Consensus 20 ~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~--~--~~~~i~~~~h~D~vp~~--- 92 (218)
..+++++++++||+|||++++|.++++||.++|+++|++++.+. .+|++|++++ + ++|+|+|+|||||||.+
T Consensus 9 ~~~~~~~~~~~l~~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~-~~nv~a~~~g~~g~~~~~~i~l~aH~D~vp~~~~~ 87 (487)
T 2qyv_A 9 QPKLLWQWFDQICAIPHPSYKEEQLAQFIINWAKTKGFFAERDE-VGNVLIRKPATVGMENRKPVVLQAHLDMVPQANEG 87 (487)
T ss_dssp SSHHHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTBCCEEEEEESCBCCC----
T ss_pred CHHHHHHHHHHHHcCCCCCCcHHHHHHHHHHHHHHcCCEEEEcC-CCcEEEEeCCCCCCCCCCeEEEEccCCccCCCCCC
Confidence 35679999999999999999999999999999999999987653 4799999964 2 35899999999999986
Q ss_pred ---ccCCCCcccc-CCCcccccCC----c--HHHHHHHHHHH
Q 045912 93 ---ELVNWEHKSK-IDGKMHACGH----D--APTTMLLGEAK 124 (218)
Q Consensus 93 ---~~~~~pf~~~-~~g~~~~~G~----d--~~~a~ll~aa~ 124 (218)
+|+.+||++. .+|++||||| | +++|++|.+++
T Consensus 88 ~~~~w~~~p~~~~~~dg~l~g~G~~lgaD~k~g~a~~l~a~~ 129 (487)
T 2qyv_A 88 TNHNFDQDPILPYIDGDWVKAKGTTLGADNGIGMASALAVLE 129 (487)
T ss_dssp ------CCCCCEEECSSEEEETTBCCCHHHHHHHHHHHHHHH
T ss_pred CccccccCCeeEEeeCCEEEeCCCCcCCcCHHHHHHHHHHHH
Confidence 4577899987 4899999999 6 77888887765
No 23
>1fno_A Peptidase T; metallo peptidase, protease, hydrolase; 2.40A {Salmonella typhimurium} SCOP: c.56.5.4 d.58.19.1 PDB: 1vix_A
Probab=99.92 E-value=2.4e-24 Score=184.59 Aligned_cols=186 Identities=10% Similarity=0.075 Sum_probs=148.1
Q ss_pred HHHHHHHHHHhCCCCCC----------ChHHHHHHHHHHHHhcCCc-eeecCCCceEEEEecCC---CCcEEEEEeeCCC
Q 045912 23 WLISIRRQIHENPELRF----------EVHNTNALIRSELDKLGIT-YSCPLVKTGIVAKIGSG---SHPFIALRADMDA 88 (218)
Q Consensus 23 ~~~~~~~~L~~~pe~~~----------~E~~~a~~i~~~L~~~G~~-~~~~~~~~~via~~~~~---~~~~i~~~~h~D~ 88 (218)
++++++++|++||++|+ +|.++++||.++|+++|++ ++.+ ..+||+|++++. ++|+|+|+|||||
T Consensus 3 ~~~~~l~~Lv~i~s~s~~~~~~~p~~~~e~~~~~~l~~~l~~~G~~~~~~~-~~~nvia~~~g~~~~~~~~i~l~aH~D~ 81 (417)
T 1fno_A 3 KLLERFLHYVSLDTQSKSGVRQVPSTEGQWKLLRLLKQQLEEMGLVNITLS-EKGTLMATLPANVEGDIPAIGFISHVDT 81 (417)
T ss_dssp SHHHHHHHHHTSCCBCCSSCSSSSSSHHHHHHHHHHHHHHHHHTCEEEEEC-TTCCEEEEECCSSCSCCCCEEEEEECCB
T ss_pred HHHHHHHHhEEecCCCCcccCCCCCCccHHHHHHHHHHHHHHcCCCeEEEC-CCceEEEEECCCCCCCCCceEEEEeccc
Confidence 47889999999999998 7899999999999999998 7654 368999999542 3589999999999
Q ss_pred CCccc-cCCCCc-----ccc-----------------------CCCcccccC-----Cc--HHHHHHHHHHHHHHhhccc
Q 045912 89 LPLQE-LVNWEH-----KSK-----------------------IDGKMHACG-----HD--APTTMLLGEAKLLHRRKDQ 132 (218)
Q Consensus 89 vp~~~-~~~~pf-----~~~-----------------------~~g~~~~~G-----~d--~~~a~ll~aa~~L~~~~~~ 132 (218)
||.++ |...|| ... .+|++|||| +| +++|++|++++.|++.+ .
T Consensus 82 Vp~~~~~~~~p~~~~~~~g~~i~~~~g~~~~~~~~~~~~~~~~gd~~l~grGat~l~~D~K~g~a~~l~a~~~l~~~~-~ 160 (417)
T 1fno_A 82 SPDFSGKNVNPQIVENYRGGDIALGIGDEVLSPVMFPVLHQLLGQTLITTDGKTLLGADDKAGVAEIMTALAVLKGNP-I 160 (417)
T ss_dssp CTTSCCSSCCCEEETTCCSSCEECSSSSCEECTTTCGGGGGCTTSCEEECCSSSCCCHHHHHHHHHHHHHHHHHHSSS-C
T ss_pred cCCCCCCCCCceEEecCCCCeecccccccccchhhcchhhhhcCCcEEEcCCccccccccHHhHHHHHHHHHHHHhCC-C
Confidence 99754 444575 332 246899999 77 89999999999998754 2
Q ss_pred CC--------------------------------------------------------------C---------------
Q 045912 133 LN--------------------------------------------------------------A--------------- 135 (218)
Q Consensus 133 ~~--------------------------------------------------------------~--------------- 135 (218)
+. +
T Consensus 161 ~~~~v~~~~~~~EE~g~Ga~~~~~~~~~~d~~i~~d~~~~g~i~~~~~g~~~~~i~~~G~~~Hs~~~p~~g~nAi~~~a~ 240 (417)
T 1fno_A 161 PHGDIKVAFTPDEEVGKGAKHFDVEAFGAQWAYTVDGGGVGELEFENFNAASVNIKIVGNNVHPGTAKGVMVNALSLAAR 240 (417)
T ss_dssp CCCCEEEEEESCGGGTCTTTTCCHHHHCCSEEEECCCCSTTBEECCBCEEEEEEEEEECBCCCGGGCTTTCBCHHHHHHH
T ss_pred CCCcEEEEEEeccccCCChhhhchhhcCCCEEEEeCCCCcCeeEEecCCceeEEEEEEeeccCCCCCccccCCHHHHHHH
Confidence 21 0
Q ss_pred -------------------------CCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCe--EEEEeeeccc
Q 045912 136 -------------------------ADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCN--AYVDFQVEEF 188 (218)
Q Consensus 136 -------------------------~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~--~~i~~~~~~~ 188 (218)
.|..|++|++.+|+|+.+.+..+.+.++|+++++.++..++.. +++++ .
T Consensus 241 ~i~~l~~~~~~~~~~~~~~~~~v~~i~gGp~~a~~~~d~R~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~----~ 316 (417)
T 1fno_A 241 IHAEVPADEAPETTEGYEGFYHLASMKGTVDRAEMHYIIRDFDRKQFEARKRKMMEIAKKVGKGLHPDCYIELVI----E 316 (417)
T ss_dssp HHHTSCTTSSGGGCCTTCCEEEEEEEEECSSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHTTTCCTTCCEEEEE----E
T ss_pred HHHhhhccCCcccccccccEEEEEEEeeccCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHcCCCceEEEEE----e
Confidence 1224899999999999999999999999999999887766643 66665 3
Q ss_pred CCCCc----ccCCHHHHHHHHHHHHhhcCCC
Q 045912 189 PLIPA----ALDNDSLYLLVERVGKSLLGPE 215 (218)
Q Consensus 189 ~~~p~----~~~d~~l~~~l~~~~~~~~G~~ 215 (218)
..+++ +.+++++++.+++++++ +|.+
T Consensus 317 ~~~~~~~~~~~~~~~l~~~~~~~~~~-~g~~ 346 (417)
T 1fno_A 317 DSYYNMREKVVEHPHILDIAQQAMRD-CHIT 346 (417)
T ss_dssp EEECCCHHHHHTSTHHHHHHHHHHHH-TTCC
T ss_pred ccccchhccccCCCHHHHHHHHHHHH-cCCC
Confidence 33333 46789999999999988 5754
No 24
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=99.92 E-value=2.4e-24 Score=188.20 Aligned_cols=103 Identities=15% Similarity=0.071 Sum_probs=87.1
Q ss_pred hHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecC--C--CCcEEEEEeeCCCCCccc--
Q 045912 20 DKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGS--G--SHPFIALRADMDALPLQE-- 93 (218)
Q Consensus 20 ~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~--~--~~~~i~~~~h~D~vp~~~-- 93 (218)
..+++++++++|++|||+|++|.++++||.++|+++||+++++. ..|++|++++ | .+|+|+|+||||+||.++
T Consensus 12 ~~~~~~~~~~~L~~ips~s~~e~~~~~~l~~~l~~~G~~v~~~~-~~nv~a~~~g~~g~~~~~~v~l~aH~D~vp~~~~~ 90 (490)
T 3mru_A 12 SPAPLWQFFDKICSIPHPSKHEEALAQYIVTWATEQGFDVRRDP-TGNVFIKKPATPGMENKKGVVLQAHIDMVPQKNED 90 (490)
T ss_dssp SSHHHHHHHHHHHHSCCBTTCCTTHHHHHHHHHHHTTCEEEECT-TCCEEEEECCCTTCTTCCCEEEEEECCBCCCBCTT
T ss_pred CHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHcCCEEEEcC-CCeEEEEEcCCCCCCCCCeEEEEeccCCCCCCCCC
Confidence 35678999999999999999999999999999999999987753 4699999953 2 468999999999999863
Q ss_pred ----cCCCCcccc-CCCcccccCC----c--HHHHHHHHHH
Q 045912 94 ----LVNWEHKSK-IDGKMHACGH----D--APTTMLLGEA 123 (218)
Q Consensus 94 ----~~~~pf~~~-~~g~~~~~G~----d--~~~a~ll~aa 123 (218)
|+.+||.+. .+|++||||| | +++|++|+++
T Consensus 91 ~~~~w~~~p~~~~~~~g~l~g~G~~lgaD~k~g~a~~l~~l 131 (490)
T 3mru_A 91 TDHDFTQDPIQPYIDGEWVTAKGTTLGADNGIGMASCLAVL 131 (490)
T ss_dssp SCCCTTTCCCCEEEETTEEEETTBCCCHHHHTTHHHHHHHH
T ss_pred cccccccCCceEEeeCCeEecCCCccCCCCHHHHHHHHHHH
Confidence 567899876 4799999999 7 5677777654
No 25
>1z2l_A Allantoate amidohydrolase; ALLC, purine cataboli allantoin utilization, structural genomics, PSI, Pro structure initiative; HET: 1AL; 2.25A {Escherichia coli} SCOP: c.56.5.4 d.58.19.1 PDB: 2imo_A
Probab=99.90 E-value=2e-22 Score=172.94 Aligned_cols=195 Identities=9% Similarity=0.035 Sum_probs=141.0
Q ss_pred HHHHHhHHHHHHHHHHHHhCCCCC----------CChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCC-C-CcEEEE
Q 045912 15 IETERDKNWLISIRRQIHENPELR----------FEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSG-S-HPFIAL 82 (218)
Q Consensus 15 ~~i~~~~~~~~~~~~~L~~~pe~~----------~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~-~-~~~i~~ 82 (218)
.+++...+++++++++|++||+++ ++|.++++||.++|+++||+++.+. ..|++|++.+. + +|+|+|
T Consensus 2 ~~~~~~~~~~~~~l~~lv~i~s~s~~g~~~~~~s~~e~~~~~~i~~~l~~~G~~v~~~~-~gnv~a~~~g~~~~~~~i~l 80 (423)
T 1z2l_A 2 SLITHFRQAIEETLPWLSSFGADPAGGMTRLLYSPEWLETQQQFKKRMAASGLETRFDE-VGNLYGRLNGTEYPQEVVLS 80 (423)
T ss_dssp -CHHHHHHHHHHHHHHHHHTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHTTCEEEECT-TSCEEEEECCSSEEEEEEEE
T ss_pred CcccccHHHHHHHHHHHHhcCCCCCCCcccCcCCHHHHHHHHHHHHHHHHcCCEEEEec-CCcEEEEEcCCCCCCCEEEE
Confidence 456777889999999999999987 6899999999999999999987653 34999999543 2 389999
Q ss_pred EeeCCCCCccccCC---------------------CC------ccc-cCC------------------------------
Q 045912 83 RADMDALPLQELVN---------------------WE------HKS-KID------------------------------ 104 (218)
Q Consensus 83 ~~h~D~vp~~~~~~---------------------~p------f~~-~~~------------------------------ 104 (218)
+|||||||.+.+.+ .+ |.. ++.
T Consensus 81 ~~H~D~Vp~~g~~D~k~g~a~~l~a~~~l~~~~~~~~~~v~~i~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~d~ 160 (423)
T 1z2l_A 81 GSHIDTVVNGGNLDGQFGALAAWLAIDWLKTQYGAPLRTVEVVAMAEEEGSRFPYVFWGSKNIFGLANPDDVRNICDAKG 160 (423)
T ss_dssp EEECCCCTTBCSSTTHHHHHHHHHHHHHHHHHHCSCSEEEEEEEESCSSCCSSSCSCHHHHHHTTCCCGGGTSSCCCSSS
T ss_pred EEecCCCCCCCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCcccHHHHHcCCCHHHHhhhcCcCC
Confidence 99999999753310 00 000 000
Q ss_pred ---------------------------------------------------------------Cc-cccc--CCcHHHHH
Q 045912 105 ---------------------------------------------------------------GK-MHAC--GHDAPTTM 118 (218)
Q Consensus 105 ---------------------------------------------------------------g~-~~~~--G~d~~~a~ 118 (218)
|+ .|+. -++.+.-+
T Consensus 161 ~~~~~~~~~~G~~~~~~~p~~~~~~~~~~~~h~~~~~~~e~~~~~~~~~~~~~g~~~~~i~v~G~~~Ha~~~P~~~g~nA 240 (423)
T 1z2l_A 161 NSFVDAMKACGFTLPNAPLTPRQDIKAFVELHIEQGCVLESNGQSIGVVNAIVGQRRYTVTLNGESNHAGTTPMGYRRDT 240 (423)
T ss_dssp CCHHHHHHHTTCCCCSSCCCCCCCEEEEEEEEECCSSHHHHTTCCEEEEEEECEEEEEEEEEECCCEETTTSCGGGCCCH
T ss_pred cCHHHHHHHcCCccccccccCCCCceEEEEEEeccCchHHHCCCCeEEEeeEecceEEEEEEEeEcCCCCCCccccCcCH
Confidence 00 0211 01101111
Q ss_pred HHHHHHHHHhhc------c-c----C-------CCCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEE
Q 045912 119 LLGEAKLLHRRK------D-Q----L-------NAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAY 180 (218)
Q Consensus 119 ll~aa~~L~~~~------~-~----~-------~~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~ 180 (218)
+..+++++.... . . . .+.|+||++|++.+|+|+.+.+..+++.++|+++++..+..++++++
T Consensus 241 i~~~a~~i~~l~~~~~~~~~~~~~~vg~i~gg~~~~NvIP~~a~~~~d~R~~~~~~~~~i~~~i~~~~~~~~~~~g~~~~ 320 (423)
T 1z2l_A 241 VYAFSRICHQSVEKAKRMGDPLVLTFGKVEPRPNTVNVVPGKTTFTIDCRHTDAAVLRDFTQQLENDMRAICDEMDIGID 320 (423)
T ss_dssp HHHHHHHHHHHHHHHHHHCTTCEEECCCEEEESCCTTEECCEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHHHHHhcCCCceEEEEEEeecCCcceeECCEEEEEEEeeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEE
Confidence 222233222111 0 0 0 17899999999999999999999999999999999999888999998
Q ss_pred EEeeecccCCCCcccCCHHHHHHHHHHHHhhcCCC
Q 045912 181 VDFQVEEFPLIPAALDNDSLYLLVERVGKSLLGPE 215 (218)
Q Consensus 181 i~~~~~~~~~~p~~~~d~~l~~~l~~~~~~~~G~~ 215 (218)
+++ ...+|++.+|+++++.++++++++ |.+
T Consensus 321 ~~~----~~~~~~~~~~~~l~~~~~~~~~~~-g~~ 350 (423)
T 1z2l_A 321 IDL----WMDEEPVPMNKELVATLTELCERE-KLN 350 (423)
T ss_dssp EEE----EEEECCEECCHHHHHHHHHHHHHT-TCC
T ss_pred EEE----ecCCCCccCCHHHHHHHHHHHHHc-CCC
Confidence 887 567888889999999999999886 653
No 26
>3n5f_A L-carbamoylase, N-carbamoyl-L-amino acid hydrolase; hinge domain, M20 peptidase family, evolution, residue, dimerization domain; 2.75A {Bacillus stearothermophilus}
Probab=99.90 E-value=4.7e-22 Score=169.91 Aligned_cols=189 Identities=15% Similarity=0.123 Sum_probs=138.7
Q ss_pred HHHHHHHHHHHHhCCCC----------CCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCC-C-CcEEEEEeeCCC
Q 045912 21 KNWLISIRRQIHENPEL----------RFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSG-S-HPFIALRADMDA 88 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~----------~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~-~-~~~i~~~~h~D~ 88 (218)
.+++++++++|++||+. |++|.++++||.++|+++|++++.+. ..||+|++++. + +|+|+|+|||||
T Consensus 4 ~~~~~~~l~~l~~i~s~~~~g~~r~~~s~~e~~~~~~l~~~l~~~g~~~~~d~-~gnv~a~~~g~~~~~~~i~l~aH~D~ 82 (408)
T 3n5f_A 4 GERLWQRLMELGEVGKQPSGGVTRLSFTAEERRAKDLVASYMREAGLFVYEDA-AGNLIGRKEGTNPDATVVLVGSHLDS 82 (408)
T ss_dssp HHHHHHHHHHHHTTTBCTTSSBCCCTTSHHHHHHHHHHHHHHHHHTCEEEECT-TCCEEEEECCSSTTSCEEEEEEESCC
T ss_pred HHHHHHHHHHHHccCCCCCCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEEcC-CCCEEEEecCCCCCCCEEEEEecCCC
Confidence 46789999999999993 78999999999999999999988753 35999999643 3 699999999999
Q ss_pred CCccccC-------------------CC-C-------cccc-CC--------C---------------------------
Q 045912 89 LPLQELV-------------------NW-E-------HKSK-ID--------G--------------------------- 105 (218)
Q Consensus 89 vp~~~~~-------------------~~-p-------f~~~-~~--------g--------------------------- 105 (218)
||.+... .. + |.+. +. |
T Consensus 83 v~~~g~~d~~~g~a~~l~~~~~l~~~~~~~~~~i~~~~~~~EE~~~~~~g~~Gs~~~~~~~~~~~~~~~~~~G~~~~~~l 162 (408)
T 3n5f_A 83 VYNGGCFDGPLGVLAGVEVVQTMNEHGVVTHHPIEVVAFTDEEGARFRFGMIGSRAMAGTLPPEALECRDAEGISLAEAM 162 (408)
T ss_dssp CTTBCSSTTHHHHHHHHHHHHHHHHTTCCCSSCEEEEEESCSSCTTTTCCCHHHHHHHTCCCGGGGSCBCTTCCBHHHHH
T ss_pred CCCCCccCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEEcCccccccCCCCcCHHHHHcCCCHHHhhccCCCCCCHHHHH
Confidence 9964220 00 1 1111 10 0
Q ss_pred -----------------------------------------------------------c-ccc-c-CCcHHHHHHHHHH
Q 045912 106 -----------------------------------------------------------K-MHA-C-GHDAPTTMLLGEA 123 (218)
Q Consensus 106 -----------------------------------------------------------~-~~~-~-G~d~~~a~ll~aa 123 (218)
+ .|+ . -++.+.-++..++
T Consensus 163 ~~~G~~~~~~~~~~~~~~~~~~~~~lhi~~g~~le~~~~~~gi~~~~~g~~~~~i~v~G~~~Hags~P~~~g~nAi~~aa 242 (408)
T 3n5f_A 163 KQAGLDPDRLPQAARKPGTVKAYVELHIEQGRVLEETGLPVGIVTGIAGLIWVKFTIEGKAEHAGATPMSLRRDPMAAAA 242 (408)
T ss_dssp HHTTCCGGGGGGGCCCTTTEEEEEEEEECSSSHHHHHTCSEEEEEEECEEEEEEEEEECCCEETTTSCTTTCCCHHHHHH
T ss_pred HHhCCChhhhhhcccCccCccEEEEEeeccchhHHHcCCCeEEEEEeccceEEEEEEEEEcCcCCCCccccccCHHHHHH
Confidence 0 122 0 0010010222233
Q ss_pred HHHHhhc------cc--C---------CCCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeec
Q 045912 124 KLLHRRK------DQ--L---------NAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVE 186 (218)
Q Consensus 124 ~~L~~~~------~~--~---------~~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~ 186 (218)
+++.+.. .. + .+.|+||++|++.+|+|+.+.+..+.+.++|++++++++..+++++++++
T Consensus 243 ~~i~~l~~~~~~~~~~~~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~a~~~g~~~~i~~--- 319 (408)
T 3n5f_A 243 QIIIVIEEEARRTGTTVGTVGQLHVYPGGINVIPERVEFVLDLRDLKAEVRDQVWKAIAVRAETIAKERNVRVTTER--- 319 (408)
T ss_dssp HHHHHHHHHHHHHSSCEEEEEEEEEESCCTTEECSEEEEEEEEEESSHHHHHHHHHHHHHHHHHHHHHHTCEEEEEE---
T ss_pred HHHHHHHHHHHhcCCcEEEEEEEEecCCCCcCcCCeEEEEEEEeCCCHHHHHHHHHHHHHHHHHHHHHhCCeEEEEE---
Confidence 3332211 00 0 17899999999999999999999999999999999999988999999998
Q ss_pred ccCCCCcccCCHHHHHHHHHHHHhhcCCC
Q 045912 187 EFPLIPAALDNDSLYLLVERVGKSLLGPE 215 (218)
Q Consensus 187 ~~~~~p~~~~d~~l~~~l~~~~~~~~G~~ 215 (218)
...+|++.+|+++++.++++++++ |.+
T Consensus 320 -~~~~p~~~~d~~l~~~~~~a~~~~-g~~ 346 (408)
T 3n5f_A 320 -LQEMPPVLCSDEVKRAAEAACQKL-GYP 346 (408)
T ss_dssp -EEEECCEECCHHHHHHHHHHHHHH-TCC
T ss_pred -ecCCCCcCCCHHHHHHHHHHHHHc-CCC
Confidence 677888999999999999999886 654
No 27
>4h2k_A Succinyl-diaminopimelate desuccinylase; DAPE, MCSG, PSI-biology, structural genomics, midwest center structural genomics, hydrolase; 1.84A {Haemophilus influenzae}
Probab=99.89 E-value=1.3e-22 Score=164.25 Aligned_cols=110 Identities=21% Similarity=0.310 Sum_probs=95.0
Q ss_pred hHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecC--CCceEEEEecCCCCcEEEEEeeCCCCCccc---c
Q 045912 20 DKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPL--VKTGIVAKIGSGSHPFIALRADMDALPLQE---L 94 (218)
Q Consensus 20 ~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~--~~~~via~~~~~~~~~i~~~~h~D~vp~~~---~ 94 (218)
..+++++++++||+|||+|++|.++++||+++|+++||++++.. +++|++|+++. .+|+|+|+|||||||.++ |
T Consensus 4 ~~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~vp~~~~~~w 82 (269)
T 4h2k_A 4 MKEKVVSLAQDLIRRPSISPNDEGCQQIIAERLEKLGFQIEWMPFNDTLNLWAKHGT-SEPVIAFAGHTDVVPTGDENQW 82 (269)
T ss_dssp HHHHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHTTTCEEEECCBTTBCEEEEEECS-SSCEEEEEEECCBCCCCCGGGC
T ss_pred hHHHHHHHHHHHhCCCCCCCCcHHHHHHHHHHHHHcCCeEEEEEcCCceEEEEEeCC-CCCEEEEEeeecccCCCCcccc
Confidence 34688999999999999999999999999999999999987532 46899999953 358999999999999764 6
Q ss_pred CCCCcccc-CCCcccccCC-c--HHHHHHHHHHHHHHhhc
Q 045912 95 VNWEHKSK-IDGKMHACGH-D--APTTMLLGEAKLLHRRK 130 (218)
Q Consensus 95 ~~~pf~~~-~~g~~~~~G~-d--~~~a~ll~aa~~L~~~~ 130 (218)
+.+||++. .+|++||||+ | +++|+++.+++.|.+.+
T Consensus 83 ~~~pf~~~~~~g~~~grG~~D~k~g~a~~l~a~~~l~~~~ 122 (269)
T 4h2k_A 83 SSPPFSAEIIDGMLYGRGAADMKGSLAAMIVAAEEYVKAN 122 (269)
T ss_dssp SSCTTSCCEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred cCCCCCeEEECCEEEeCCcccChHHHHHHHHHHHHHHHhC
Confidence 78899976 4899999998 3 89999999999988654
No 28
>3t68_A Succinyl-diaminopimelate desuccinylase; DAPE, csgid, metalloenzyme, structural genomics; 1.65A {Vibrio cholerae o1 biovar el tor} PDB: 3t6m_A
Probab=99.87 E-value=2.4e-22 Score=162.64 Aligned_cols=109 Identities=15% Similarity=0.236 Sum_probs=92.9
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeec--CCCceEEEEecCCCCcEEEEEeeCCCCCccc---cC
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCP--LVKTGIVAKIGSGSHPFIALRADMDALPLQE---LV 95 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~--~~~~~via~~~~~~~~~i~~~~h~D~vp~~~---~~ 95 (218)
.+++++++++||+|||+|++|.++++||.++|+++||+++.. .+++|++|+++. .+|+|+|+|||||||.++ |+
T Consensus 5 ~~~~~~~l~~lv~ips~s~~e~~~~~~l~~~l~~~G~~~~~~~~~~~~nv~a~~g~-~~~~i~l~~H~D~vp~~~~~~w~ 83 (268)
T 3t68_A 5 DSPVLALAKELISRQSVTPADAGCQDLMIERLKALGFEIESMVFEDTTNFWARRGT-QSPLFVFAGHTDVVPAGPLSQWH 83 (268)
T ss_dssp CCHHHHHHHHHHTSCCBTTCCTTHHHHHHHHHHHTTCEECCCEETTEEC-CEEECS-SSCEEEEEEECCBCCCCCGGGCS
T ss_pred HHHHHHHHHHHhCCCCCCCCchHHHHHHHHHHHHCCCeEEEEecCCccEEEEEeCC-CCCeEEEEccccccCCCCcccCC
Confidence 467899999999999999999999999999999999987653 245799999954 358999999999999864 57
Q ss_pred CCCcccc-CCCcccccCC-c--HHHHHHHHHHHHHHhhc
Q 045912 96 NWEHKSK-IDGKMHACGH-D--APTTMLLGEAKLLHRRK 130 (218)
Q Consensus 96 ~~pf~~~-~~g~~~~~G~-d--~~~a~ll~aa~~L~~~~ 130 (218)
.+||+.. .+|++||||+ | +++|+++.+++.|++.+
T Consensus 84 ~~pf~~~~~~g~~~g~G~~D~k~g~a~~l~a~~~l~~~~ 122 (268)
T 3t68_A 84 TPPFEPTVIDGFLHGRGAADMKGSLACMIVAVERFIAEH 122 (268)
T ss_dssp SCTTSCEEETTEEESTTTTTTHHHHHHHHHHHHHHHHHC
T ss_pred CCCCccEEECCEEEecCcccchHHHHHHHHHHHHHHHhC
Confidence 7899865 5899999998 3 89999999999988654
No 29
>2v8h_A Beta-alanine synthase; amidohydrolase, alpha and beta protein, DI-zinc center, COMP N-carbamyl-beta-alanine, hydrolase; HET: BCN; 2.0A {Saccharomyces kluyveri} PDB: 2v8d_A* 2vl1_A 2v8g_A 2v8v_A 1r43_A 1r3n_A
Probab=99.86 E-value=8.9e-21 Score=164.98 Aligned_cols=189 Identities=12% Similarity=0.023 Sum_probs=135.9
Q ss_pred HhHHHHHHHHHHH-HhCCCC-----------------CCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecC-CCCcE
Q 045912 19 RDKNWLISIRRQI-HENPEL-----------------RFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGS-GSHPF 79 (218)
Q Consensus 19 ~~~~~~~~~~~~L-~~~pe~-----------------~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~-~~~~~ 79 (218)
.+.+++++++++| ++||++ +++|.++++||.++|+++||+++.+. ..|++|++++ +++|+
T Consensus 29 ~~~~~~~~~l~~L~v~i~s~s~~~~~~~~~g~~r~~~s~~e~~~~~~l~~~l~~~G~~v~~d~-~gnvia~~~g~~~~~~ 107 (474)
T 2v8h_A 29 IASGRLNQTILETGSQFGGVARWGQESHEFGMRRLAGTALDGAMRDWFTNECESLGCKVKVDK-IGNMFAVYPGKNGGKP 107 (474)
T ss_dssp CCTTHHHHHHHHHHHHTTEECCCSSSTTCCEECCCTTSHHHHHHHHHHHHHHHHTTCEEEEBT-TCCEEEEECCSSCCSC
T ss_pred CCHHHHHHHHHHHhhhcCCccccccccccCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEEec-CceEEEEECCCCCCCe
Confidence 3567899999999 999987 36799999999999999999987643 3589999954 34579
Q ss_pred EEEEeeCCCCCccccC-------------------CCC--------ccc-cCC---------------------------
Q 045912 80 IALRADMDALPLQELV-------------------NWE--------HKS-KID--------------------------- 104 (218)
Q Consensus 80 i~~~~h~D~vp~~~~~-------------------~~p--------f~~-~~~--------------------------- 104 (218)
|+|+|||||||.+++- ..+ |.. ++.
T Consensus 108 i~l~~H~DtVp~~g~~D~k~gvaa~L~a~~~L~~~~~~~~~~v~lif~~dEE~~~~~~g~~Gs~~l~~~~~~~~~~~~~d 187 (474)
T 2v8h_A 108 TATGSHLDTQPEAGKYDGILGVLAGLEVLRTFKDNNYVPNYDVCVVVWFNAEGARFARSCTGSSVWSHDLSLEEAYGLMS 187 (474)
T ss_dssp EEEEECCCCCSSBCSSTTHHHHHHHHHHHHHHHHHTCCCSSCEEEEECTTCSCSSSSCTTHHHHHHTTSSCHHHHHTCBC
T ss_pred EEEEEecccCCCCCCcCCHHHHHHHHHHHHHHHHcCCCCCCCEEEEEECCccCCCCCCCcccHHHHHhccCHhhhhhhcc
Confidence 9999999999975431 000 000 000
Q ss_pred -----------------------------------------------------------C----------c-cccc--CC
Q 045912 105 -----------------------------------------------------------G----------K-MHAC--GH 112 (218)
Q Consensus 105 -----------------------------------------------------------g----------~-~~~~--G~ 112 (218)
| + .|+. -+
T Consensus 188 ~~~~dg~~~~e~l~~~G~~~~~~~~~~~e~~~~~~~lHi~~g~~l~~~g~~~~i~~~~~G~~~~~i~v~G~~~Hsg~~P~ 267 (474)
T 2v8h_A 188 VGEDKPESVYDSLKNIGYIGDTPASYKENEIDAHFELHIEQGPILEDENKAIGIVTGVQAYNWQKVTVHGVGAHAGTTPW 267 (474)
T ss_dssp SSCSSCCBHHHHHHHHTCCCSBCSCTTTSCCSEEEEEEECCSSHHHHTTCSEEEEEEECEEEEEEEEEECCCEETTTCCG
T ss_pred cccccCccHHHHHHhcCCcccccccccccchhhheeeeeccCccccccCCcceeEEeecceEEEEEEEEeecCCCCCCCc
Confidence 0 0 0111 01
Q ss_pred cHHHHHHHHHHHHHHhhcc-----c----C-------CCCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHH--
Q 045912 113 DAPTTMLLGEAKLLHRRKD-----Q----L-------NAADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAV-- 174 (218)
Q Consensus 113 d~~~a~ll~aa~~L~~~~~-----~----~-------~~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~-- 174 (218)
+.+.-++..+++++.+... . . .+.|+||++|++.+|+|+.+.+..+++.++|+++++..+..
T Consensus 268 ~~g~nAi~~~a~~i~~l~~~~~~~~~t~~vg~i~gG~~~~NvIP~~a~~~~diR~~~~~~~~~i~~~i~~~~~~~~~~~~ 347 (474)
T 2v8h_A 268 RLRKDALLMSSKMIVAASEIAQRHNGLFTCGIIDAKPYSVNIIPGEVSFTLDFRHPSDDVLATMLKEAAAEFDRLIKIND 347 (474)
T ss_dssp GGCCCHHHHHHHHHHHHHHHHHHTTCEEECCCEEEESCCTTEECSEEEEEEEEEESCHHHHHHHHHHHHHHHHHHTTCCT
T ss_pred ccCCCHHHHHHHHHHHHHHHHhhcCCEEEEEEEEecCCCCceeCCEEEEEEEecCCChHHHHHHHHHHHHHHHHHHhhcc
Confidence 0011122233333332211 0 0 27899999999999999999999999999999999988766
Q ss_pred -hCCeEEEEeeecccCCCCcccCCHHHHHHHHHHHHhhcC
Q 045912 175 -HRCNAYVDFQVEEFPLIPAALDNDSLYLLVERVGKSLLG 213 (218)
Q Consensus 175 -~g~~~~i~~~~~~~~~~p~~~~d~~l~~~l~~~~~~~~G 213 (218)
.+++++++. ...+|++.+++++++.++++++++ |
T Consensus 348 ~~g~~~~~~~----~~~~~~~~~d~~l~~~~~~a~~~~-G 382 (474)
T 2v8h_A 348 GGALSYESET----LQVSPAVNFHEVCIECVSRSAFAQ-F 382 (474)
T ss_dssp TCCCEEEEEE----EEEECCEECCHHHHHHHHHHHHHH-S
T ss_pred cCCcEEEEEE----ecCCCCccCCHHHHHHHHHHHHHc-C
Confidence 788888887 566788889999999999999886 6
No 30
>1q7l_A Aminoacylase-1; catalysis, enzyme dimerization, site- directed mutagenesis, structure comparison, zinc, hydrolase; 1.40A {Homo sapiens} SCOP: c.56.5.4
Probab=99.86 E-value=2.9e-21 Score=149.58 Aligned_cols=110 Identities=15% Similarity=0.105 Sum_probs=93.7
Q ss_pred HHHHHHHHHHHHhCCCCCC--ChHHHHHHHHHHHHhcCCceeec---CCCceEEEEecC-CC-CcEEEEEeeCCCCCccc
Q 045912 21 KNWLISIRRQIHENPELRF--EVHNTNALIRSELDKLGITYSCP---LVKTGIVAKIGS-GS-HPFIALRADMDALPLQE 93 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~--~E~~~a~~i~~~L~~~G~~~~~~---~~~~~via~~~~-~~-~~~i~~~~h~D~vp~~~ 93 (218)
.+++++++++|++|||+++ +|.++++||+++|+++|+++++. .++.|+++++.+ ++ +|+|+|.|||||||.++
T Consensus 9 ~~~~~~~l~~lv~i~s~s~~~~e~~~~~~l~~~l~~~g~~~~~~~~~~g~~~~i~~~~g~~~~~~~ill~aH~DtVp~~~ 88 (198)
T 1q7l_A 9 EHPSVTLFRQYLRIRTVQPKPDYGAAVAFFEETARQLGLGCQKVEVAPGYVVTVLTWPGTNPTLSSILLNSHTDVVPVFK 88 (198)
T ss_dssp CCHHHHHHHHHHTSCCBTTSCCHHHHHHHHHHHHHHHTCEEEEEEEETTEEEEEEEECCSSTTSCEEEEEEECCBCCCCG
T ss_pred HHHHHHHHHHHhcCCCCCCCcCHHHHHHHHHHHHHHCCCeEEEEEcCCCCeEEEEEEccCCCCCCeEEEEeeecccCCCc
Confidence 3568999999999999998 79999999999999999997753 256799999954 32 48999999999999863
Q ss_pred --cCCCCccccC--CCcccccC-Cc--HHHHHHHHHHHHHHhhc
Q 045912 94 --LVNWEHKSKI--DGKMHACG-HD--APTTMLLGEAKLLHRRK 130 (218)
Q Consensus 94 --~~~~pf~~~~--~g~~~~~G-~d--~~~a~ll~aa~~L~~~~ 130 (218)
|+.+||.+.. +|++|||| +| +++|++|.+++.|++.+
T Consensus 89 ~~w~~~pf~~~~~~~g~l~GrGa~D~K~g~a~~l~a~~~l~~~~ 132 (198)
T 1q7l_A 89 EHWSHDPFEAFKDSEGYIYARGAQDMKCVSIQYLEAVRRLKVEG 132 (198)
T ss_dssp GGCSSCTTTCCBCTTSEEECTTTTTTHHHHHHHHHHHHHHHHTT
T ss_pred ccCccCCCeeeEccCCEEEeCcchhchHHHHHHHHHHHHHHHcC
Confidence 6788999864 78999999 56 99999999999998754
No 31
>2gre_A Deblocking aminopeptidase; structural genomi protein structure initiative, midwest center for structural genomics, MCSG, hydrolase; 2.65A {Bacillus cereus} SCOP: b.49.3.1 c.56.5.4
Probab=99.56 E-value=1.9e-14 Score=120.45 Aligned_cols=69 Identities=10% Similarity=0.120 Sum_probs=60.4
Q ss_pred hHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCC-CCcEEEEEeeCCCC
Q 045912 20 DKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSG-SHPFIALRADMDAL 89 (218)
Q Consensus 20 ~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~-~~~~i~~~~h~D~v 89 (218)
..+++++++++|+++|++|++|.+.++||.++|+++|+++++. ...|++|++++. .+|+|+|.||||||
T Consensus 4 ~~~~~~~~l~~lv~i~s~s~~e~~~~~~l~~~l~~~g~~~~~d-~~gnl~a~~~g~~~~~~ill~~H~Dtv 73 (349)
T 2gre_A 4 HTKETMELIKELVSIPSPSGNTAKIINFIENYVSEWNVETKRN-NKGALILTVKGKNDAQHRLLTAHVDTL 73 (349)
T ss_dssp HHHHHHHHHHHHHTSCCBTTCCHHHHHHHHHHTTTSSSEEEEC-SSSCEEEEECCSEEEEEEEEEEECCBC
T ss_pred cHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhCCEEEEe-cCCcEEEEecCCCCCceEEEEeccccc
Confidence 3567899999999999999999999999999999999998765 356899999543 34889999999999
No 32
>1vho_A Endoglucanase; structural genomics, unknown function; HET: MSE; 1.86A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.53 E-value=7.7e-14 Score=116.48 Aligned_cols=68 Identities=9% Similarity=-0.058 Sum_probs=59.1
Q ss_pred HHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCCCCcEEEEEeeCCCCC
Q 045912 22 NWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALP 90 (218)
Q Consensus 22 ~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~~~~~i~~~~h~D~vp 90 (218)
.++++++++|+++|++|++|.+.+++|.++|+++|++++.+ ...|++|.+.+.++|.|+|.||||+|+
T Consensus 5 ~~~~~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~i~l~aH~DtV~ 72 (346)
T 1vho_A 5 METGKLLMELSNLDGPSGYETNVVSYIKSVIEPFVDEAKTT-RHGSLIGYKKGKGIGKLAFFAHVDEIG 72 (346)
T ss_dssp CCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHGGGCSEEEEC-TTSCEEEEECCSSSCEEEEEEECCBCC
T ss_pred HHHHHHHHHHHcCCCCCcchHHHHHHHHHHHHhhCCEEEEe-cCCcEEEEEcCCCCceEEEEecCcccc
Confidence 35689999999999999999999999999999999998764 356899998543348999999999994
No 33
>1vhe_A Aminopeptidase/glucanase homolog; structural genomics, unknown function; HET: MSE; 1.90A {Bacillus subtilis} SCOP: b.49.3.1 c.56.5.4
Probab=99.47 E-value=3.1e-13 Score=114.05 Aligned_cols=68 Identities=9% Similarity=0.184 Sum_probs=59.9
Q ss_pred HHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCC-CCcEEEEEeeCCCCC
Q 045912 22 NWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSG-SHPFIALRADMDALP 90 (218)
Q Consensus 22 ~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~-~~~~i~~~~h~D~vp 90 (218)
+++++++++|+++|++|++|.+++++|.++|+++|++++.+ ...|++|.+.+. .+|+|+|.||||+||
T Consensus 7 ~~~~~~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~~~~~~vll~aH~D~v~ 75 (373)
T 1vhe_A 7 DETLTMLKDLTDAKGIPGNEREVRQVMKSYIEPFADEVTTD-RLGSLIAKKTGAENGPKIMIAGHLDEVG 75 (373)
T ss_dssp CHHHHHHHHHHHSCCCTTCCHHHHHHHHHHHGGGCSEEEEC-TTCCEEEEEESSTTSCEEEEEEECCCCE
T ss_pred HHHHHHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEc-CCCcEEEEecCCCCCceEEEEecCCcCC
Confidence 36889999999999999999999999999999999998765 356899988543 358999999999998
No 34
>2wyr_A Cobalt-activated peptidase TET1; hydrolase, large SELF-assembled dodecamer, hyperthermophilic; 2.24A {Pyrococcus horikoshii} PDB: 2cf4_A
Probab=99.46 E-value=1.7e-13 Score=113.73 Aligned_cols=64 Identities=17% Similarity=0.272 Sum_probs=57.0
Q ss_pred HHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCCCCcEEEEEeeCCCCC
Q 045912 24 LISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALP 90 (218)
Q Consensus 24 ~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~~~~~i~~~~h~D~vp 90 (218)
+++++++|+++|++|++|.+.+++|.++|+++|+ ++.+ ...|++|.++++ +|+|+|.||||+|+
T Consensus 4 ~~~~l~~l~~~~s~sg~e~~~~~~l~~~l~~~g~-~~~d-~~gnlia~~~~~-~~~i~l~aH~D~v~ 67 (332)
T 2wyr_A 4 MIEKLKKFTQIPGISGYEERIREEIIREIKDFAD-YKVD-AIGNLIVELGEG-EERILFMAHMDEIG 67 (332)
T ss_dssp HHHHHHHHHTSCCBTTCCHHHHHHHHHHHTTTCC-CEEC-TTCCEEEEEESS-SEEEEEEEECCBCE
T ss_pred HHHHHHHHHcCCCCCCcHHHHHHHHHHHHhhcCc-EEEc-CCCeEEEEecCC-CceEEEEeccCccc
Confidence 6789999999999999999999999999999999 7654 467999998653 58999999999994
No 35
>1tkj_A Aminopeptidase, SGAP; double-zinc metalloproteinase, calcium activation, protein- inhibitor complex, hydrolase; HET: MED; 1.15A {Streptomyces griseus} SCOP: c.56.5.4 PDB: 1f2o_A 1f2p_A* 1cp7_A 1qq9_A* 1tf9_A* 1tf8_A* 1tkh_A* 1tkf_A* 1xbu_A* 1xjo_A
Probab=99.46 E-value=1.4e-13 Score=111.93 Aligned_cols=96 Identities=13% Similarity=0.110 Sum_probs=77.7
Q ss_pred HHHHHHHHHHHHhCCCCCC--------ChHHHHHHHHHHHHhcCCceeecCC------CceEEEEecCC-CCcEEEEEee
Q 045912 21 KNWLISIRRQIHENPELRF--------EVHNTNALIRSELDKLGITYSCPLV------KTGIVAKIGSG-SHPFIALRAD 85 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~--------~E~~~a~~i~~~L~~~G~~~~~~~~------~~~via~~~~~-~~~~i~~~~h 85 (218)
.+++++++++|++||++++ .|.++++||.++|+++|++++.... ++||+|++++. ++++|+|.||
T Consensus 6 ~~~~~~~l~~L~~i~s~s~~~r~~~~~~e~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~nvi~~~~g~~~~~~i~l~aH 85 (284)
T 1tkj_A 6 LANVKAHLTQLSTIAANNGGNRAHGRPGYKASVDYVKAKLDAAGYTTTLQQFTSGGATGYNLIANWPGGDPNKVLMAGAH 85 (284)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCCCTTSHHHHHHHHHHHHHHHHHTCEEEEEEEEETTEEEEEEEEECSCSEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHcccccCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEEEeccCCCCceeEEEEEeCCCCCCEEEEEee
Confidence 4678899999999999876 6899999999999999998765321 46999999653 3478999999
Q ss_pred CCCCCccccCCCCccccCCCcccccCCcHHHHHHHHHHHHHHhhc
Q 045912 86 MDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRRK 130 (218)
Q Consensus 86 ~D~vp~~~~~~~pf~~~~~g~~~~~G~d~~~a~ll~aa~~L~~~~ 130 (218)
||+||.+. .+++.++++|++|.+++.|++.+
T Consensus 86 ~D~v~~g~--------------Ga~D~~~g~a~~l~~~~~l~~~~ 116 (284)
T 1tkj_A 86 LDSVSSGA--------------GINDNGSGSAAVLETALAVSRAG 116 (284)
T ss_dssp CCCCTTSC--------------CTTTTHHHHHHHHHHHHHHHHTT
T ss_pred cCCCCCCC--------------CCccChHHHHHHHHHHHHHHhcC
Confidence 99998531 12344589999999999998754
No 36
>2fvg_A Endoglucanase; TM1049, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; 2.01A {Thermotoga maritima} SCOP: b.49.3.1 c.56.5.4
Probab=99.45 E-value=7.8e-14 Score=116.27 Aligned_cols=63 Identities=14% Similarity=0.155 Sum_probs=55.3
Q ss_pred HHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCC-CCcEEEEEeeCCCCC
Q 045912 27 IRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSG-SHPFIALRADMDALP 90 (218)
Q Consensus 27 ~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~-~~~~i~~~~h~D~vp 90 (218)
++++|+++|++|++|.+++++|.++|+++|++++.+. ..|++|.+.+. .+|+|+|.||||+||
T Consensus 3 ~l~~L~~~~s~sg~e~~~~~~l~~~l~~~g~~~~~d~-~gnlia~~~g~~~~~~v~l~aH~D~v~ 66 (340)
T 2fvg_A 3 YLKELSMMPGVSGDEGKVRDFIKSKIEGLVDNLYTDV-LGNLIALKRGRDSSKKLLVSAHMDEVG 66 (340)
T ss_dssp CHHHHHHSCCBTTCCHHHHHHHHHHHGGGSSEEEECT-TSCEEEEECCSEEEEEEEEEEECCBCE
T ss_pred HHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEeC-CCcEEEEecCCCCCceEEEEeccCcCc
Confidence 5789999999999999999999999999999987643 46999998543 348999999999999
No 37
>1ylo_A Hypothetical protein SF2450; structural genomics, MCSG, PSI, structure initiative; 2.15A {Shigella flexneri 2a str} SCOP: b.49.3.1 c.56.5.4
Probab=99.44 E-value=4.7e-13 Score=111.72 Aligned_cols=64 Identities=13% Similarity=0.214 Sum_probs=56.1
Q ss_pred HHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCCCCcEEEEEeeCCCCC
Q 045912 26 SIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALP 90 (218)
Q Consensus 26 ~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~~~~~i~~~~h~D~vp 90 (218)
+++++|+++|++|++|.+.+++|.++|+++|++++.+ ...|++|.+.+..+|.|+|.||||||+
T Consensus 7 ~~l~~Lv~~~s~sg~e~~~~~~l~~~l~~~g~~v~~d-~~gnlia~~~g~~~~~vll~aH~DtV~ 70 (348)
T 1ylo_A 7 SLLKALSEADAIASSEQEVRQILLEEAARLQKEVRFD-GLGSVLIRLNESTGPKVMICAHMDEVG 70 (348)
T ss_dssp HHHHHHHHSCCBTTBCHHHHHHHHHHHHHTTCCEEEC-TTCCEEEECCCCSSCEEEEEEECCCCE
T ss_pred HHHHHHHcCCCCCCchHHHHHHHHHHHHhhCCEEEEe-cCCCEEEEecCCCCceEEEEEcCCccc
Confidence 7899999999999999999999999999999998764 346899998543348999999999995
No 38
>2wzn_A TET3, 354AA long hypothetical operon protein FRV; protease, hydrolase, thermophilic, SELF-compartmentalising; 1.90A {Pyrococcus horikoshii} PDB: 2pe3_A
Probab=99.43 E-value=2e-13 Score=111.89 Aligned_cols=66 Identities=17% Similarity=0.225 Sum_probs=58.1
Q ss_pred HHHHHHHHhCCCCCCChH-HHHHHHHHHHHhcCCceeecCCCceEEEEecCCCCcEEEEEeeCCCCCcc
Q 045912 25 ISIRRQIHENPELRFEVH-NTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALPLQ 92 (218)
Q Consensus 25 ~~~~~~L~~~pe~~~~E~-~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~~~~~i~~~~h~D~vp~~ 92 (218)
++++++|+++||+|++|. ++++||+++|+++|++++++. ..||+|+++++ +|+|+|.|||||||..
T Consensus 12 ~elL~~Lv~ipS~sg~E~~~v~~~l~~~l~~~G~~v~~D~-~GNlia~~~g~-~p~lll~~H~Dtvp~~ 78 (354)
T 2wzn_A 12 WKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVDK-LGNVIAHFKGS-SPRIMVAAHMDKIGVM 78 (354)
T ss_dssp HHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTSSEEEECT-TCCEEEEECCS-SSEEEEEEECCBCEEE
T ss_pred HHHHHHHhcCCCCCcchHHHHHHHHHHHHHHcCCEEEEeC-CCeEEEEECCC-CceEEEEeccccCCCc
Confidence 589999999999999885 689999999999999988753 46999999765 5899999999999853
No 39
>1y0y_A FRV operon protein FRVX; aminopeptidase, PDZ, hydrolase; HET: ATI; 1.60A {Pyrococcus horikoshii} SCOP: b.49.3.1 c.56.5.4 PDB: 1y0r_A* 1xfo_A
Probab=99.32 E-value=2.9e-12 Score=107.30 Aligned_cols=65 Identities=12% Similarity=0.124 Sum_probs=58.1
Q ss_pred HHHHHHHHHhCCCCCCCh-HHHHHHHHHHHHhcCCceeecCCCceEEEEecCCCCcEEEEEeeCCCCC
Q 045912 24 LISIRRQIHENPELRFEV-HNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALP 90 (218)
Q Consensus 24 ~~~~~~~L~~~pe~~~~E-~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~~~~~i~~~~h~D~vp 90 (218)
+++++++|+++|++|++| .+.+++|.++|+++|++++.+ ...|++|.++++ +|.|+|.||||+|+
T Consensus 8 ~~~~l~~L~~~~s~sg~e~~~~~~~l~~~l~~~g~~~~~d-~~gnlia~~~g~-~~~i~l~aH~D~v~ 73 (353)
T 1y0y_A 8 DYELLKKVVEAPGVSGYEFLGIRDVVIEEIKDYVDEVKVD-KLGNVIAHKKGE-GPKVMIAAHMDQIG 73 (353)
T ss_dssp CHHHHHHHHHSCCBTTCGGGTHHHHHHHHHGGGSSEEEEC-TTCCEEEEECCS-SCEEEEEEECCBCE
T ss_pred HHHHHHHHHhCCCCCccchHHHHHHHHHHHHhhCCeEEEc-CCCCEEEEecCC-CccEEEEeccCccc
Confidence 678999999999999999 999999999999999998764 357999998654 58999999999995
No 40
>3cpx_A Aminopeptidase, M42 family; YP_676701.1, putative M42 glutamyl aminopeptidase, structura genomics; 2.39A {Cytophaga hutchinsonii atcc 33406}
Probab=99.29 E-value=1.1e-12 Score=108.50 Aligned_cols=70 Identities=10% Similarity=-0.024 Sum_probs=60.4
Q ss_pred HhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecC----C--CceEEEEecCCCCcEEEEEeeCCCCC
Q 045912 19 RDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPL----V--KTGIVAKIGSGSHPFIALRADMDALP 90 (218)
Q Consensus 19 ~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~----~--~~~via~~~~~~~~~i~~~~h~D~vp 90 (218)
+..+++++++++|+++|++|++|.+.+++|+++|+++|++++++. + ..|+++.+++ . |.|+|.||||||+
T Consensus 14 ~~~~~~~~~l~~Lv~i~s~sg~e~~v~~~l~~~l~~~g~~v~~d~~~~~~~~~gnlia~~~g-~-~~ill~aH~DtV~ 89 (321)
T 3cpx_A 14 NLYFQGMQLLKELCSIHAPSGNEEPLKDFILEYIRSNAGSWSYQPVIYADNDLQDCIVLVFG-N-PRTAVFAHMDSIG 89 (321)
T ss_dssp GGGCCHHHHHHHHHHSCCBTTCCHHHHHHHHHHHHHHGGGSSSCCEEECSGGGTTCEEEEES-S-CSEEEEEECCBCE
T ss_pred hHHHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHhhCCeEEEccccccccCCccEEEEecC-C-ceEEEEecCCcCC
Confidence 456678999999999999999999999999999999999876543 1 4689998865 4 7899999999994
No 41
>1rtq_A Bacterial leucyl aminopeptidase; bimetallic, zinc, high resolution, hydrolase; 0.95A {Vibrio proteolyticus} SCOP: c.56.5.4 PDB: 1txr_A* 1xry_A* 2dea_A 2nyq_A 3fh4_A 3vh9_A* 1lok_A 1cp6_A 1ft7_A* 1igb_A* 1amp_A 2iq6_A 2prq_A 3b3v_A 3b3w_A 3b7i_A* 3b3t_A 3b35_A 3b3c_A* 3b3s_A ...
Probab=99.26 E-value=2.4e-11 Score=99.49 Aligned_cols=101 Identities=13% Similarity=0.145 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHhCCC---CCCChHHHHHHHHHHHHhcC--Cc-eeecC------CCceEEEEecCC--CCcEEEEEeeC
Q 045912 21 KNWLISIRRQIHENPE---LRFEVHNTNALIRSELDKLG--IT-YSCPL------VKTGIVAKIGSG--SHPFIALRADM 86 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe---~~~~E~~~a~~i~~~L~~~G--~~-~~~~~------~~~~via~~~~~--~~~~i~~~~h~ 86 (218)
.+++++++++|+++|+ .+..|.++++||.++|+++| ++ ++... ...||+|++.+. +++.|+|.|||
T Consensus 19 ~~~~~~~l~~L~~i~sr~~~s~~~~~~~~~l~~~l~~~g~~~~~~~~~~~~~~~~~~~nvi~~~~g~~~~~~~v~l~aH~ 98 (299)
T 1rtq_A 19 ASQITGTISSLESFTNRFYTTTSGAQASDWIASEWQALSASLPNASVKQVSHSGYNQKSVVMTITGSEAPDEWIVIGGHL 98 (299)
T ss_dssp HHHHHHHHHHHHTSSCCCTTSHHHHHHHHHHHHHHHHHHTTSTTEEEEEEEETTEEEEEEEEEECCSSEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCcCCCCCCCchHHHHHHHHHHHHHHhcCCcccceeeeeccCCCCCceEEEEEECCCCCCCEEEEEecc
Confidence 5689999999999984 45678899999999999987 33 32221 247999999543 24789999999
Q ss_pred CCCCccccCCCCccccCCCcccccCC-c--HHHHHHHHHHHHHHhhc
Q 045912 87 DALPLQELVNWEHKSKIDGKMHACGH-D--APTTMLLGEAKLLHRRK 130 (218)
Q Consensus 87 D~vp~~~~~~~pf~~~~~g~~~~~G~-d--~~~a~ll~aa~~L~~~~ 130 (218)
|+|| +.|. ++..+++|. | +++|++|.+++.|++.+
T Consensus 99 D~v~-~~~~--------~~~~~~~Ga~D~~~g~a~~l~~~~~l~~~~ 136 (299)
T 1rtq_A 99 DSTI-GSHT--------NEQSVAPGADDDASGIAAVTEVIRVLSENN 136 (299)
T ss_dssp CCCS-STTC--------CTTCCCCCTTTTHHHHHHHHHHHHHHHHTT
T ss_pred ccCC-CcCc--------CCCcccCCCcccHHHHHHHHHHHHHHHHcC
Confidence 9998 2221 134577776 3 89999999999998754
No 42
>3tc8_A Leucine aminopeptidase; phosphorylase/hydrolase-like, structural genomics, joint CEN structural genomics, JCSG; 1.06A {Parabacteroides distasonis}
Probab=99.24 E-value=7.4e-11 Score=96.94 Aligned_cols=106 Identities=13% Similarity=0.058 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHHhCCC---CCCChHHHHHHHHHHHHhcCCceeecC-------C----CceEEEEecCCCCcEEEEEeeC
Q 045912 21 KNWLISIRRQIHENPE---LRFEVHNTNALIRSELDKLGITYSCPL-------V----KTGIVAKIGSGSHPFIALRADM 86 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe---~~~~E~~~a~~i~~~L~~~G~~~~~~~-------~----~~~via~~~~~~~~~i~~~~h~ 86 (218)
.+.+.+.+++|.++.. .+..|.++++||.++|+++|++++... + ..||||++++...+.|+|.|||
T Consensus 24 ~~~~~~~l~~l~~~~~R~~~s~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~ 103 (309)
T 3tc8_A 24 ADSAYAYVANQVAFGPRVPNTAAHKACGDYLASELKRFGAKVYQQEAILTAYDGTKLEARNIIGSFDPENSKRVLLFAHW 103 (309)
T ss_dssp HHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEEC
T ss_pred HHHHHHHHHHHHccCCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEecc
Confidence 4567777888877643 355689999999999999999976521 1 3799999976545899999999
Q ss_pred CCCCccccCCCCccccCCCcccccCC---cHHHHHHHHHHHHHHhhc
Q 045912 87 DALPLQELVNWEHKSKIDGKMHACGH---DAPTTMLLGEAKLLHRRK 130 (218)
Q Consensus 87 D~vp~~~~~~~pf~~~~~g~~~~~G~---d~~~a~ll~aa~~L~~~~ 130 (218)
|+||.++ .+||.. .+|..+ .|. .+++|++|.+++.|++.+
T Consensus 104 Dsv~~~~--~~p~~~-~~~~~~-~Ga~D~~sGva~~Le~ar~l~~~~ 146 (309)
T 3tc8_A 104 DSRPYSD--HDPDPS-KHRTPL-DGADDGGSGVGALLEIARQIGQKA 146 (309)
T ss_dssp CCCSCCT--TCSSGG-GTTSCC-CCTTTTHHHHHHHHHHHHHHHHSC
T ss_pred cCCCCCC--CCcccc-CCCccc-cCcccchHhHHHHHHHHHHHHhCC
Confidence 9999764 357753 345554 454 279999999999998653
No 43
>3gux_A Putative Zn-dependent exopeptidase; aminopeptidase, phosphorylase/hydrolase-like fold, structura genomics; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=99.22 E-value=5.3e-11 Score=97.96 Aligned_cols=106 Identities=14% Similarity=0.117 Sum_probs=72.4
Q ss_pred HHHHHHHHHHHHhCCCC---CCChHHHHHHHHHHHHhcCCceeecC-------C----CceEEEEecCCCCcEEEEEeeC
Q 045912 21 KNWLISIRRQIHENPEL---RFEVHNTNALIRSELDKLGITYSCPL-------V----KTGIVAKIGSGSHPFIALRADM 86 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~---~~~E~~~a~~i~~~L~~~G~~~~~~~-------~----~~~via~~~~~~~~~i~~~~h~ 86 (218)
.+++.+++++|+++++- +..|.++++||.++|+++|++++... + ..||||++++...+.|+|.|||
T Consensus 26 ~~~~~~~l~~L~~~~~R~~gs~~~~~~~~~l~~~l~~~G~~v~~~~~~~~~~~g~~~~~~Nvia~~~g~~~~~ill~aH~ 105 (314)
T 3gux_A 26 ADSAYQYIQVQADFGPRVPNTQAHKECGEYLAGQLEKFGAKVYNQYADLIAYDGTILKSRNIIGAYKPESKKRILLCAHW 105 (314)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEEC
T ss_pred HHHHHHHHHHHHccCCcCCCCHHHHHHHHHHHHHHHHCCCEEEEEEeeccccCCCcccceEEEEEECCCCCceEEEEccc
Confidence 46788899999988742 44689999999999999999876421 1 2799999976545899999999
Q ss_pred CCCCccccCCCCccccCCCcccccCC---cHHHHHHHHHHHHHHhhc
Q 045912 87 DALPLQELVNWEHKSKIDGKMHACGH---DAPTTMLLGEAKLLHRRK 130 (218)
Q Consensus 87 D~vp~~~~~~~pf~~~~~g~~~~~G~---d~~~a~ll~aa~~L~~~~ 130 (218)
|+||.++ .+|+... ++. ...|. .+++|++|.+++.|++.+
T Consensus 106 Dsv~~~~--~~p~~~~-~~~-~~~GA~D~~sGva~~Le~ar~l~~~~ 148 (314)
T 3gux_A 106 DSRPYAD--NDPDPKN-HHT-PILGVNDGASGVGVLLEIARQIQKEQ 148 (314)
T ss_dssp CCCC------------------------CHHHHHHHHHHHHHHHHSC
T ss_pred cCCCcCC--CCccccc-CCc-ccCCCcccHHHHHHHHHHHHHHHhCC
Confidence 9999764 3465422 232 23444 389999999999998753
No 44
>3kl9_A PEPA, glutamyl aminopeptidase; tetrahedral aminopeptidase, S specificity, metallopeptidase M42, hydrolas; 2.70A {Streptococcus pneumoniae}
Probab=99.19 E-value=5.9e-11 Score=99.27 Aligned_cols=67 Identities=18% Similarity=0.109 Sum_probs=60.2
Q ss_pred HHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCC--CCcEEEEEeeCCCCC
Q 045912 23 WLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSG--SHPFIALRADMDALP 90 (218)
Q Consensus 23 ~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~--~~~~i~~~~h~D~vp 90 (218)
++++++++|.++|++|++|.++++||.++|+++|++++++ ...|+++++++. .+|.|+|.||||+|+
T Consensus 4 ~~~~~l~~L~~ips~SG~E~~v~~~l~~~l~~~g~~~~~D-~~GNli~~~~g~~~~~~~v~l~aHmD~Vg 72 (355)
T 3kl9_A 4 TLFSKIKEVTELAAVSGHEAPVRAYLREKLTPHVDEVVTD-GLGGIFGIKHSEAVDAPRVLVASHMDEVG 72 (355)
T ss_dssp HHHHHHHHHHTSCCBTTCCHHHHHHHHHHHGGGSSEEEEC-TTSCEEEEECCCSTTCCEEEEEEECCBCE
T ss_pred HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCEEEEC-CCCeEEEEECCcCCCCCeEEEEecccccc
Confidence 5789999999999999999999999999999999998775 357999999653 468999999999998
No 45
>2vpu_A TET3, 354AA long hypothetical operon protein FRV; unknown function, protease, thermophilic, SELF-compartmentalising, hydrolase; 1.9A {Pyrococcus horikoshii} PDB: 2wzn_A 2pe3_A
Probab=99.08 E-value=1.6e-10 Score=96.55 Aligned_cols=66 Identities=18% Similarity=0.201 Sum_probs=59.3
Q ss_pred HHHHHHHHHHhCCCCCCChH-HHHHHHHHHHHhcCCceeecCCCceEEEEecCCCCcEEEEEeeCCCCC
Q 045912 23 WLISIRRQIHENPELRFEVH-NTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALP 90 (218)
Q Consensus 23 ~~~~~~~~L~~~pe~~~~E~-~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~~~~~i~~~~h~D~vp 90 (218)
.+++++++|.++|++|++|. ++++||.++|+++|++++++ ...|+++++++.. |.|+|.||||+|+
T Consensus 10 ~~~~~l~~L~~ipspSG~E~~~v~~~l~~~l~~~g~~~~~D-~~GNvi~~~~g~~-~~v~l~aHmDtVg 76 (354)
T 2vpu_A 10 VDWKLMQEIIEAPGVSGYEHLGIRDIVVDVLKEVADEVKVD-KLGNVIAHFKGSS-PRIMVAAHMDKIG 76 (354)
T ss_dssp CCHHHHHHHHHSCCBTTCGGGTHHHHHHHHHHTTCSEEEEC-TTCCEEEEECCSS-SEEEEECCCCBCE
T ss_pred HHHHHHHHHHhCCCCCcccHHHHHHHHHHHHHHhCCEEEEc-CCCeEEEEEcCCC-CEEEEEecccccc
Confidence 46899999999999999999 99999999999999988775 3579999996543 8999999999998
No 46
>2afw_A Glutaminyl-peptide cyclotransferase; alpha-beta protein, metalloprotein; HET: AHN; 1.56A {Homo sapiens} SCOP: c.56.5.8 PDB: 2afo_A 2afm_A* 2afx_A* 2afz_A 3pbb_A* 2zed_A 2zeh_A 2afu_A 2zee_A 2zeo_A 2zef_A 2zem_A 2zel_A 2zen_A 3pbe_A 2zeg_A 2zep_A 2afs_A 3si0_A* 3si2_A* ...
Probab=99.06 E-value=6.2e-10 Score=92.26 Aligned_cols=99 Identities=10% Similarity=0.103 Sum_probs=74.1
Q ss_pred HHHH-HHHHHHHHhCCCC-CCChHHHHHHHHHHHHh--cCCceeecC-------C---CceEEEEecCCCCcEEEEEeeC
Q 045912 21 KNWL-ISIRRQIHENPEL-RFEVHNTNALIRSELDK--LGITYSCPL-------V---KTGIVAKIGSGSHPFIALRADM 86 (218)
Q Consensus 21 ~~~~-~~~~~~L~~~pe~-~~~E~~~a~~i~~~L~~--~G~~~~~~~-------~---~~~via~~~~~~~~~i~~~~h~ 86 (218)
.+++ .+++++|+..... +..+.++++||.++|++ +|++++... + ..||||++++...+.|++.||+
T Consensus 30 ~~~~~~~~l~~L~~~r~~~s~~~~~~~~~l~~~l~~~~~G~~v~~~~~~~~~~~g~~~~~Nvi~~~~g~~~~~i~l~aH~ 109 (329)
T 2afw_A 30 ISEMWQNDLQPLLIERYPGSPGSYAARQHIMQRIQRLQADWVLEIDTFLSQTPYGYRSFSNIISTLNPTAKRHLVLACHY 109 (329)
T ss_dssp HHHHHHHTTGGGCSCCCTTSHHHHHHHHHHHHHHHTSSSCCEEEEEEEEECCTTSSEEEEEEEEESSTTSSEEEEEEEEC
T ss_pred HHHHHHHHHHHHcCCCCCCCHHHHHHHHHHHHHHHhhCCCCEEEEEEEEecCCCCCceEeEEEEEECCCCCcEEEEEEec
Confidence 5567 7888899655444 33466899999999999 999876531 1 3799999976545899999999
Q ss_pred CCCCccccCCCCccccCCCcccccCC---cHHHHHHHHHHHHHHhh
Q 045912 87 DALPLQELVNWEHKSKIDGKMHACGH---DAPTTMLLGEAKLLHRR 129 (218)
Q Consensus 87 D~vp~~~~~~~pf~~~~~g~~~~~G~---d~~~a~ll~aa~~L~~~ 129 (218)
|+||.+.+. |+. +.|. .+++|++|.+++.|++.
T Consensus 110 Dsv~~~~~~---------~~~-~~Ga~D~~sGva~~le~ar~l~~~ 145 (329)
T 2afw_A 110 DSKYFSHWN---------NRV-FVGATDSAVPCAMMLELARALDKK 145 (329)
T ss_dssp CCCCCCCBT---------TBC-CCCTTTTHHHHHHHHHHHHHTHHH
T ss_pred cCCCcCccc---------CcC-CCCcccchhhHHHHHHHHHHHHHH
Confidence 999965221 332 3444 38999999999999875
No 47
>3isx_A Endoglucanase; TM1050, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2, hydrolase; HET: MSE; 1.40A {Thermotoga maritima}
Probab=99.00 E-value=1e-09 Score=91.16 Aligned_cols=66 Identities=15% Similarity=0.089 Sum_probs=58.4
Q ss_pred HHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecCCCceEEEEecCCCCcEEEEEeeCCCCC
Q 045912 23 WLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPLVKTGIVAKIGSGSHPFIALRADMDALP 90 (218)
Q Consensus 23 ~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~~~~~via~~~~~~~~~i~~~~h~D~vp 90 (218)
.+.+++++|.++|++|+.|.+++++|.++|+++|.+++++ ...|+++++++ .+|.|+|.||||+|.
T Consensus 12 ~~~~~l~~L~~~pspSG~E~~v~~~i~~~l~~~~~e~~~D-~~Gnvi~~~g~-~~~~v~l~aHmDevG 77 (343)
T 3isx_A 12 HMKELIRKLTEAFGPSGREEEVRSIILEELEGHIDGHRID-GLGNLIVWKGS-GEKKVILDAHIDEIG 77 (343)
T ss_dssp CCHHHHHHHHHSCCBTTCCHHHHHHHHHHHTTTCSEEEEC-TTCCEEEEECC-CSSEEEEEEECCBCE
T ss_pred HHHHHHHHHHhCCCCCCchHHHHHHHHHHHHHhCCEEEEC-CCCCEEEEECC-CCCEEEEEecccccc
Confidence 3568999999999999999999999999999999988775 35799999854 458999999999997
No 48
>4fuu_A Leucine aminopeptidase; phosphorylase/hydrolase like fold, peptidase family M28, STR genomics, joint center for structural genomics; 1.30A {Bacteroides thetaiotaomicron}
Probab=98.89 E-value=1.8e-08 Score=82.67 Aligned_cols=108 Identities=16% Similarity=0.139 Sum_probs=73.6
Q ss_pred HHHHHHHHHHHHhC-CCC--CCChHHHHHHHHHHHHhcCCceeec-------CC----CceEEEEecCCCCcEEEEEeeC
Q 045912 21 KNWLISIRRQIHEN-PEL--RFEVHNTNALIRSELDKLGITYSCP-------LV----KTGIVAKIGSGSHPFIALRADM 86 (218)
Q Consensus 21 ~~~~~~~~~~L~~~-pe~--~~~E~~~a~~i~~~L~~~G~~~~~~-------~~----~~~via~~~~~~~~~i~~~~h~ 86 (218)
.+...+.++.|+++ |=. |....++++||.+.|+++|++++.. .+ ..||||++++...+.|++.||+
T Consensus 24 ~~~a~~~l~~l~~fgpR~~gS~~~~~a~~~i~~~l~~~g~~v~~q~~~~~~~~~~~~~~~Nii~~~~g~~~~~i~l~aH~ 103 (309)
T 4fuu_A 24 ADSAYLYVKNQVDFGPRVPNTKEHVACGNYLAGKLEAFGAKVTNQYADLIAYDGTLLKARNIIGSYKPESKKRIALFAHW 103 (309)
T ss_dssp HHHHHHHHHHHHTTCCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEECTTSCEEEEEEEEEEESTTCSSEEEEEEEC
T ss_pred HHHHHHHHHHHhCcCCcCCCCHHHHHHHHHHHHHHHHcCCeeEEEeEEeccCCCCcceeEEEEEEECCCCCceEEEEeec
Confidence 34566777778775 323 3345789999999999999997642 11 2599999976555899999999
Q ss_pred CCCCccccCCCCccccCCCcccccCCc-HHHHHHHHHHHHHHhhc
Q 045912 87 DALPLQELVNWEHKSKIDGKMHACGHD-APTTMLLGEAKLLHRRK 130 (218)
Q Consensus 87 D~vp~~~~~~~pf~~~~~g~~~~~G~d-~~~a~ll~aa~~L~~~~ 130 (218)
|++|.++....+-.. .....|...| +++|+||.+|+.|.+..
T Consensus 104 Ds~~~~~~~~~~~~~--~~~~~GA~D~aSG~a~lLE~ar~l~~~~ 146 (309)
T 4fuu_A 104 DTRPWADNDADEKNH--HTPILGANDGASGVGALLEIARLVNQQQ 146 (309)
T ss_dssp CCCSCCTTCSSGGGT--TSCCCCTTTTHHHHHHHHHHHHHHHHSC
T ss_pred CCCCCCCCccccccc--cCCcCCcccCchhHHHHHHHHHHHhhcC
Confidence 999865432211110 0111233334 69999999999998754
No 49
>4fai_A CG5976, isoform B; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, transferase, hydrolase; HET: PBD; 1.65A {Drosophila melanogaster} PDB: 4fbe_A*
Probab=98.68 E-value=1.8e-07 Score=77.44 Aligned_cols=96 Identities=17% Similarity=0.186 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHhCCCCCCC--hHHHHHHHHHHHHhcCCceeecC-----------CCceEEEEecCCCCcEEEEEeeCCC
Q 045912 22 NWLISIRRQIHENPELRFE--VHNTNALIRSELDKLGITYSCPL-----------VKTGIVAKIGSGSHPFIALRADMDA 88 (218)
Q Consensus 22 ~~~~~~~~~L~~~pe~~~~--E~~~a~~i~~~L~~~G~~~~~~~-----------~~~~via~~~~~~~~~i~~~~h~D~ 88 (218)
..+-+++..| -+|=+++- ..++++||.++|+++|++++... ...||||++++...+.|++.||+|+
T Consensus 38 ~~~~~~l~~i-l~pR~~Gs~~~~~~~~~i~~~l~~~g~~v~~q~f~~~~~~~~~~~~~Nii~~~~~~~~~~i~l~aHyDs 116 (330)
T 4fai_A 38 LHLREAIDKI-LIPRVVGTTNHSIVREYIVQSLRDLDWDVEVNSFHDHAPIKGKLHFHNIIATLNPNAERYLVLSCHYDS 116 (330)
T ss_dssp HHHHHHHHHH-CSCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEESCTTCSEEEEEEEECCC
T ss_pred HHHHHHHHhh-cCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEeeeeeecCCCCceeEEEEEEEECCCCCcEEEEEEeecc
Confidence 3444555555 25766543 57899999999999999986421 1269999997655578999999999
Q ss_pred CCccccCCCCccccCCCcccccCCc-HHHHHHHHHHHHHHhh
Q 045912 89 LPLQELVNWEHKSKIDGKMHACGHD-APTTMLLGEAKLLHRR 129 (218)
Q Consensus 89 vp~~~~~~~pf~~~~~g~~~~~G~d-~~~a~ll~aa~~L~~~ 129 (218)
++..+. + ..|...+ +++|+||.+|+.|++.
T Consensus 117 ~~~~~~----------~-~~GA~DnasG~A~lLE~Ar~l~~~ 147 (330)
T 4fai_A 117 KYMPGV----------E-FLGATDSAVPCAMLLNLAQVLQEQ 147 (330)
T ss_dssp CCCTTS----------C-CCCTTTTHHHHHHHHHHHHHTHHH
T ss_pred cccccC----------C-CCCCCCccHhHHHHHHHHHHHHHh
Confidence 974321 1 1233334 6999999999999764
No 50
>4f9u_A CG32412; alpha/beta hydrolase, PGlu formation, PE, alzheimer'S diseas pyroglutamate, PGlu-amyloid, glycosylation, transferase, HY; HET: PBD NAG BMA MAN; 1.80A {Drosophila melanogaster} PDB: 4f9v_A*
Probab=98.64 E-value=2.8e-07 Score=75.59 Aligned_cols=86 Identities=20% Similarity=0.259 Sum_probs=62.9
Q ss_pred CCCCCC--ChHHHHHHHHHHHHhcCCceeecC-------C----CceEEEEecCCCCcEEEEEeeCCCCCccccCCCCcc
Q 045912 34 NPELRF--EVHNTNALIRSELDKLGITYSCPL-------V----KTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHK 100 (218)
Q Consensus 34 ~pe~~~--~E~~~a~~i~~~L~~~G~~~~~~~-------~----~~~via~~~~~~~~~i~~~~h~D~vp~~~~~~~pf~ 100 (218)
+|=+++ ...++++||.++|+++|++++... . ..||||++++...+.|++.||+|+++.++..
T Consensus 22 ~PR~~gs~~~~~~~~~i~~~l~~~g~~v~~~~f~~~~~~~~~~~~~Nii~~~~~~~~~~vvl~aHyDs~~~~~~~----- 96 (312)
T 4f9u_A 22 VPRVVGSRGHQQVREYLVQSLNGLGFQTEVDEFKQRVPVFGELTFANVVGTINPQAQNFLALACHYDSKYFPNDP----- 96 (312)
T ss_dssp SCCCTTSHHHHHHHHHHHHHHHHTTCEEEEEEEEEEETTTEEEEEEEEEEEESTTSSEEEEEEEECCCCCCTTCT-----
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHCCCeEEEEeEEEecCCCCceeEEEEEEEECCCCCceEEEEEEEecCCCCCCC-----
Confidence 565544 357899999999999999976521 1 2699999976555789999999999753210
Q ss_pred ccCCCcccccCCc-HHHHHHHHHHHHHHhh
Q 045912 101 SKIDGKMHACGHD-APTTMLLGEAKLLHRR 129 (218)
Q Consensus 101 ~~~~g~~~~~G~d-~~~a~ll~aa~~L~~~ 129 (218)
+ ..|...+ +++|+||.+|+.|.+.
T Consensus 97 ----~-~~GA~DnaSGvA~lLElAR~l~~~ 121 (312)
T 4f9u_A 97 ----G-FVGATDSAVPCAILLNTAKTLGAY 121 (312)
T ss_dssp ----T-CCCTTTTHHHHHHHHHHHHHTHHH
T ss_pred ----C-CCCccCCcccHHHHHHHHHHHHHH
Confidence 1 1233334 7999999999999764
No 51
>3pb6_X Glutaminyl-peptide cyclotransferase-like protein; alpha/beta protein, alpha/beta-mixed fold, glutaminyl cyclas membrane; 1.05A {Homo sapiens} PDB: 3pb4_X 3pb7_X* 3pb8_X* 3pb9_X*
Probab=98.61 E-value=7.9e-08 Score=79.45 Aligned_cols=83 Identities=14% Similarity=0.151 Sum_probs=60.5
Q ss_pred CCChHHHHHHHHHHHHhc--CCceeecCC----------CceEEEEecCCCCcEEEEEeeCCCCCccccCCCCccccCCC
Q 045912 38 RFEVHNTNALIRSELDKL--GITYSCPLV----------KTGIVAKIGSGSHPFIALRADMDALPLQELVNWEHKSKIDG 105 (218)
Q Consensus 38 ~~~E~~~a~~i~~~L~~~--G~~~~~~~~----------~~~via~~~~~~~~~i~~~~h~D~vp~~~~~~~pf~~~~~g 105 (218)
|..+.++++||.++|+++ |++++.+.. ..||||++++...+.|++.||+|+|+..+. + .
T Consensus 57 S~~~~~a~~~l~~~l~~~~~g~~v~~d~f~~~~~~g~~~~~Nvia~~~g~~~~~ivl~aH~Dsv~~~~g-~--------~ 127 (330)
T 3pb6_X 57 SPGNLQVRKFLEATLRSLTAGWHVELDPFTASTPLGPVDFGNVVATLDPRAARHLTLACHYDSKLFPPG-S--------T 127 (330)
T ss_dssp SHHHHHHHHHHHHHHHHSTTCCEEEEEEEEEEETTEEEEEEEEEEESCTTSSEEEEEEEECCCCCCCTT-S--------C
T ss_pred CHHHHHHHHHHHHHHHHhCCCCeEEEEeeecccccCCccceEEEEEECCCCCceEEEEeccCCCCCCCC-C--------c
Confidence 445688999999999999 888765311 269999997654589999999999974221 0 1
Q ss_pred cccccCCc-HHHHHHHHHHHHHHhh
Q 045912 106 KMHACGHD-APTTMLLGEAKLLHRR 129 (218)
Q Consensus 106 ~~~~~G~d-~~~a~ll~aa~~L~~~ 129 (218)
...|...+ +++|++|.+|+.|.+.
T Consensus 128 ~~~GA~D~asGva~lLe~ar~l~~~ 152 (330)
T 3pb6_X 128 PFVGATDSAVPCALLLELAQALDLE 152 (330)
T ss_dssp CCCCTTTTHHHHHHHHHHHHHTHHH
T ss_pred CcCCCcCChHHHHHHHHHHHHHHHH
Confidence 11233333 7999999999999863
No 52
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=97.30 E-value=0.00051 Score=58.48 Aligned_cols=83 Identities=11% Similarity=0.157 Sum_probs=52.4
Q ss_pred hCCCCCCChHHHHHHHHHHH---Hh--cCCceeecC----CCceEEEEecCC-----CCcEEEEEeeCCCCCccccCCCC
Q 045912 33 ENPELRFEVHNTNALIRSEL---DK--LGITYSCPL----VKTGIVAKIGSG-----SHPFIALRADMDALPLQELVNWE 98 (218)
Q Consensus 33 ~~pe~~~~E~~~a~~i~~~L---~~--~G~~~~~~~----~~~~via~~~~~-----~~~~i~~~~h~D~vp~~~~~~~p 98 (218)
.||..+.. .+.+++|.++| ++ .++++.... ...||+|++.+. +.+.|++.||+|+|+.+.
T Consensus 163 ~IP~~~Is-~~~a~~L~~~l~~~~~g~~~v~l~~~~~~~~~~~Nvi~~~~g~~~~~~~~~~v~~~aH~D~v~~g~----- 236 (421)
T 2ek8_A 163 FVAAVGIT-KQEGDALAANLRAGEKITATVKVAGAEVKTLTSHNVIATKKPDANKKNTNDIIIIGSHHDSVEKAP----- 236 (421)
T ss_dssp CCEEEEEC-HHHHHHHHHHHHTTCCCEEEEEEESCEEEEEEEEEEEEEECCCSSTTCCCCEEEEEEECCCCTTCC-----
T ss_pred CccEEEeC-HHHHHHHHHHhhhhccCCccccccccccccccccceEEEecCcccCCCCCCEEEEecccccCCCCC-----
Confidence 34444333 33467788888 32 223322211 136999999652 348899999999998420
Q ss_pred ccccCCCcccccCCcHHHHHHHHHHHHHHhhc
Q 045912 99 HKSKIDGKMHACGHDAPTTMLLGEAKLLHRRK 130 (218)
Q Consensus 99 f~~~~~g~~~~~G~d~~~a~ll~aa~~L~~~~ 130 (218)
.+++..+++|++|.+++.|++..
T Consensus 237 ---------Ga~D~~~G~a~~le~~~~l~~~~ 259 (421)
T 2ek8_A 237 ---------GANDDASGVAVTLELARVMSKLK 259 (421)
T ss_dssp ---------CTTTTHHHHHHHHHHHHHHTTSC
T ss_pred ---------CCCCCcHhHHHHHHHHHHHhccC
Confidence 12233489999999999998743
No 53
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=96.91 E-value=0.0018 Score=55.54 Aligned_cols=75 Identities=16% Similarity=0.219 Sum_probs=49.8
Q ss_pred HHHHHHHHHHHHhcC-Cceeec--------CCCceEEEEecCCC--CcEEEEEeeCCCCCccccCCCCccccCCCccccc
Q 045912 42 HNTNALIRSELDKLG-ITYSCP--------LVKTGIVAKIGSGS--HPFIALRADMDALPLQELVNWEHKSKIDGKMHAC 110 (218)
Q Consensus 42 ~~~a~~i~~~L~~~G-~~~~~~--------~~~~~via~~~~~~--~~~i~~~~h~D~vp~~~~~~~pf~~~~~g~~~~~ 110 (218)
.+.++.|...|+.-. +.++.. ....||+|++.+.. .+.|++.+|+|+++.+. | +.
T Consensus 203 ~~da~~L~~~l~~g~~~~v~l~~~~~~~~~~~~~Nvi~~~~g~~~~~~~i~~~aH~Ds~~~g~-----------G---a~ 268 (444)
T 3iib_A 203 NPDADLINAMLKRDKEVVISLELGSERRGETTSYNVIAEVKGSTKADEIVLIGAHLDSWDEGT-----------G---AI 268 (444)
T ss_dssp HHHHHHHHHHHTTTCCCEEEEEEEEEEEEEEEEEEEEEEECCSTEEEEEEEEEEECCCCSSSC-----------C---TT
T ss_pred HHHHHHHHHHHhCCCCeEEEEEEeeeEcCCceeEEEEEEEeCCCCCCCEEEEEeecccCCCCC-----------C---Cc
Confidence 455677777776521 322211 12369999996542 47899999999998420 1 12
Q ss_pred CCcHHHHHHHHHHHHHHhhc
Q 045912 111 GHDAPTTMLLGEAKLLHRRK 130 (218)
Q Consensus 111 G~d~~~a~ll~aa~~L~~~~ 130 (218)
+..+++|++|.+++.|++.+
T Consensus 269 D~~sG~a~~le~a~~l~~~~ 288 (444)
T 3iib_A 269 DDGAGVAIVTAAAKHILDLP 288 (444)
T ss_dssp TTHHHHHHHHHHHHHHHTSS
T ss_pred cchHHHHHHHHHHHHHHhcC
Confidence 22378999999999998764
No 54
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=95.37 E-value=0.022 Score=51.47 Aligned_cols=48 Identities=17% Similarity=0.250 Sum_probs=36.6
Q ss_pred ceEEEEecCC--CCcEEEEEeeCCCCCccccCCCCccccCCCcccccCCcHHHHHHHHHHHHHHhh
Q 045912 66 TGIVAKIGSG--SHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHDAPTTMLLGEAKLLHRR 129 (218)
Q Consensus 66 ~~via~~~~~--~~~~i~~~~h~D~vp~~~~~~~pf~~~~~g~~~~~G~d~~~a~ll~aa~~L~~~ 129 (218)
.||||++.+. +.+.|++.+|+|+++. | |.+-.+++|++|.+++.|.+.
T Consensus 313 ~NVi~~i~G~~~~~~~vllgaH~Ds~~~-------------G---a~D~~sG~a~lLe~ar~l~~~ 362 (707)
T 3fed_A 313 YNVVGTIRGSVEPDRYVILGGHRDSWVF-------------G---AIDPTSGVAVLQEIARSFGKL 362 (707)
T ss_dssp EEEEEEECCSSEEEEEEEEEEECCCSSS-------------C---TTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCCCCCceEEEeccccCCCC-------------C---CccCcHHHHHHHHHHHHHHhh
Confidence 5999999764 2478999999999962 2 111127899999999999875
No 55
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=95.14 E-value=0.03 Score=50.12 Aligned_cols=47 Identities=19% Similarity=0.219 Sum_probs=36.7
Q ss_pred ceEEEEecCC--CCcEEEEEeeCCCCCccccCCCCccccCCCcccccCCc-HHHHHHHHHHHHHHhh
Q 045912 66 TGIVAKIGSG--SHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHD-APTTMLLGEAKLLHRR 129 (218)
Q Consensus 66 ~~via~~~~~--~~~~i~~~~h~D~vp~~~~~~~pf~~~~~g~~~~~G~d-~~~a~ll~aa~~L~~~ 129 (218)
.||+|++.+. +.+.|++.+|+|++.. |...+ +++|++|.+++.|.+.
T Consensus 267 ~NVi~~i~G~~~~~~~vvvgaH~Ds~~~-----------------Ga~D~~sG~a~lLe~ar~l~~~ 316 (640)
T 3kas_A 267 LNIFGVIKGFVEPDHYVVVGAQRDAWGP-----------------GAAKSGVGTALLLKLAQMFSDM 316 (640)
T ss_dssp EEEEEEECCSSEEEEEEEEEEECCCSSC-----------------CTTTTHHHHHHHHHHHHHHHHH
T ss_pred EEEEEEEeCCcCCCCceeeecccCCCCC-----------------CCCcCcHHHHHHHHHHHHHHHh
Confidence 6999999654 2478999999999841 22233 7899999999999875
No 56
>1y7e_A Probable M18-family aminopeptidase 1; aminopeptidase I, borrelia burgdorferi B31, YSCI, structural genomics, PSI; 3.20A {Borrelia burgdorferi} SCOP: b.49.3.1 c.56.5.4
Probab=92.10 E-value=0.14 Score=43.91 Aligned_cols=51 Identities=16% Similarity=0.057 Sum_probs=34.8
Q ss_pred CCChHHHHHHHHHHHHhcCCc-------------eeecCCCceEEEEe--cCC---CCcEEEEEeeCCCCC
Q 045912 38 RFEVHNTNALIRSELDKLGIT-------------YSCPLVKTGIVAKI--GSG---SHPFIALRADMDALP 90 (218)
Q Consensus 38 ~~~E~~~a~~i~~~L~~~G~~-------------~~~~~~~~~via~~--~~~---~~~~i~~~~h~D~vp 90 (218)
|.-++.+.+++.++|++.||. +... ...|.++.+ |.. .|+. ++.||||.+-
T Consensus 32 spT~~hav~~~~~~l~~~Gf~~l~e~~~l~~g~~~~~~-r~g~~i~a~~~G~~~~~~g~~-ii~AH~Dspg 100 (458)
T 1y7e_A 32 FKTEREVTAYALDKAKKLGFINAEEKKNLMPGDKIFYT-CREKSVAFAIIGKNPIEDGMN-FIVSHTDSPR 100 (458)
T ss_dssp CCSHHHHHHHHHHHHHTTTCEESTTCCCCCTTCEEECB-CSSSCBCCEECCSSCGGGCCE-ECCCBCCCCB
T ss_pred CCCHHHHHHHHHHHHHHcCCcccccccccCCCCeEEEE-CCCCEEEEEEeCCCCCCCCcE-EEEEccCcCC
Confidence 556889999999999999986 1111 123445444 432 2455 9999999984
No 57
>2ijz_A Probable M18-family aminopeptidase 2; putative aminopeptidase 2, structura genomics, PSI, protein structure initiative; 3.00A {Pseudomonas aeruginosa}
Probab=90.87 E-value=0.057 Score=45.91 Aligned_cols=61 Identities=11% Similarity=0.040 Sum_probs=41.5
Q ss_pred HHHhCCCCCCChHHHHHHHHHHHHhcCCc-e--------------eecCCCceEEEEecC-C---CCcEEEEEeeCCCCC
Q 045912 30 QIHENPELRFEVHNTNALIRSELDKLGIT-Y--------------SCPLVKTGIVAKIGS-G---SHPFIALRADMDALP 90 (218)
Q Consensus 30 ~L~~~pe~~~~E~~~a~~i~~~L~~~G~~-~--------------~~~~~~~~via~~~~-~---~~~~i~~~~h~D~vp 90 (218)
+|.+.=.-+.-++.+.+++.++|++.||. . .....+.|++|...+ + ..+.+++.||||.+-
T Consensus 7 ~~~~fl~~~~t~~h~v~~~~~~l~~~Gf~~l~e~~~w~l~~g~k~~~~~~~g~lia~~~G~~~~~~~~~~ii~AH~Dspg 86 (428)
T 2ijz_A 7 GLIDFLKASPTPFHATASLARRLEAAGYRRLDERDAWHTETGGRYYVTRNDSSLIAIRLGRRSPLESGFRLVGAHTDSPC 86 (428)
T ss_dssp -CCCSSTTTHHHHHHHCCSHHHHHHHHHHHSCC--------CCCCEECTTTTCCEEEECC--CCSTTCCEEEECBCCCSE
T ss_pred HHHHHHHcCCCHHHHHHHHHHHHHHcCCeEcccccccccCCCCEEEEECCCCEEEEEEECCcCCCCCCcEEEEEcCCcCC
Confidence 34444444667899999999999999983 1 111112689997633 3 236899999999985
No 58
>2glf_A Probable M18-family aminopeptidase 1; putative, NYSGXRC, structural genomics, PS protein structure initiative; 2.80A {Thermotoga maritima}
Probab=90.37 E-value=0.64 Score=39.71 Aligned_cols=53 Identities=19% Similarity=0.094 Sum_probs=38.7
Q ss_pred CCChHHHHHHHHHHHHhcCCce-e-e---cCC--------CceEEEEecCCC--CcEEEEEeeCCCCC
Q 045912 38 RFEVHNTNALIRSELDKLGITY-S-C---PLV--------KTGIVAKIGSGS--HPFIALRADMDALP 90 (218)
Q Consensus 38 ~~~E~~~a~~i~~~L~~~G~~~-~-~---~~~--------~~~via~~~~~~--~~~i~~~~h~D~vp 90 (218)
+.-++.+.+.+.+.|++.||.- . . ..+ +.|++|...+++ .+.+++.||||.+-
T Consensus 30 s~t~~h~v~~~~~~l~~~Gf~~l~e~~~l~~g~k~~~~r~~~~lia~~~g~~~~~g~~ii~AH~Dsp~ 97 (450)
T 2glf_A 30 AKTERMTVKEIKRILDESGFVPLEDFAGDPMNMTVYAVNRGKAIAAFRVVDDLKRGLNLVVAHIDSPR 97 (450)
T ss_dssp CSSHHHHHHHHHHHHHTTTCEETTSCCSCTTSBCEEEESSSSCEEEEEBCSCGGGCCEEEEEECCCCE
T ss_pred CCCHHHHHHHHHHHHHHCcCEEcccccCCCCCCEEEEEcCCCEEEEEEeCCCCCCCeEEEEEecccCC
Confidence 5578999999999999999963 1 1 111 257998753322 36899999999984
No 59
>1lam_A Leucine aminopeptidase; exopeptidase, metallopeptidase, hydrolase (A aminoacylpeptide); 1.60A {Bos taurus} SCOP: c.56.5.3 c.50.1.1 PDB: 1lan_A 1lcp_A* 1lap_A 1bpn_A 1bpm_A 1bll_E* 2j9a_A* 2ewb_A*
Probab=84.44 E-value=1.2 Score=38.23 Aligned_cols=184 Identities=10% Similarity=0.033 Sum_probs=99.8
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcC--Cceeec-------CCCceEEEEecCC-CCcEEEEEeeCCC--
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKLG--ITYSCP-------LVKTGIVAKIGSG-SHPFIALRADMDA-- 88 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G--~~~~~~-------~~~~~via~~~~~-~~~~i~~~~h~D~-- 88 (218)
..+-+.+.|+|++.|.--..=...+++..+.++++| ++++.. .+-..|.+.=.+. ..|.++..-+-=.
T Consensus 160 ~a~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~ 239 (484)
T 1lam_A 160 FASGQNLARRLMETPANEMTPTKFAEIVEENLKSASIKTDVFIRPKSWIEEQEMGSFLSVAKGSEEPPVFLEIHYKGSPN 239 (484)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHCSSEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSSS
T ss_pred HHHHHHHHHHhhCCChhhcCHHHHHHHHHHHHHHcCCceEEEEEeHHHHHHCCCCceeeeccCCCCCCeEEEEEECCCCC
Confidence 345678999999999755555677888888999999 887652 1222343332221 2344433322100
Q ss_pred ---CC---ccccCCCCccccCCCc-c-cccC---C--c-HHHHHHHHHHHHHHhhcccCC-------CCCccCCeEE---
Q 045912 89 ---LP---LQELVNWEHKSKIDGK-M-HACG---H--D-APTTMLLGEAKLLHRRKDQLN-------AADVISPRAE--- 144 (218)
Q Consensus 89 ---vp---~~~~~~~pf~~~~~g~-~-~~~G---~--d-~~~a~ll~aa~~L~~~~~~~~-------~~NvIPd~a~--- 144 (218)
=| +| ...-|.+ .|. + .+.| | | +|.|+++++++++.+++.+.. .-|.|.+.+.
T Consensus 240 ~~~~~i~LVG--KGITFDs--GG~slKp~~~M~~MK~DMgGAAaVlg~~~aia~l~l~vnv~~~i~~~ENm~sg~A~rPg 315 (484)
T 1lam_A 240 ASEPPLVFVG--KGITFDS--GGISIKAAANMDLMRADMGGAATICSAIVSAAKLDLPINIVGLAPLCENMPSGKANKPG 315 (484)
T ss_dssp TTSCCEEEEE--CEEEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEECCSTTSCCTT
T ss_pred CCCCcEEEEe--cceEEcC--CCcCCcCccchhhhhccchHHHHHHHHHHHHHHcCCCeeEEEEEEeeccCCCCCCCCCC
Confidence 00 01 1111211 111 0 1223 3 3 899999999999998775433 3344433332
Q ss_pred --------EEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe---eecc----cCCCCc-ccCCHHHHHHHHHHH
Q 045912 145 --------FGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF---QVEE----FPLIPA-ALDNDSLYLLVERVG 208 (218)
Q Consensus 145 --------~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~---~~~~----~~~~p~-~~~d~~l~~~l~~~~ 208 (218)
.+++|...+.|-+--+-+.+-.. +.++-+.-|+. +|.+ -..+.. +.||+.+.+.+.++.
T Consensus 316 DVits~~GkTVEV~NTDAEGRLVLADaL~yA-----~~~~p~~iiD~ATLTGA~~vALG~~~ag~~sn~d~l~~~l~~Ag 390 (484)
T 1lam_A 316 DVVRARNGKTIQVDNTDAEGRLILADALCYA-----HTFNPKVIINAATLTGAMDIALGSGATGVFTNSSWLWNKLFEAS 390 (484)
T ss_dssp EEEECTTSCEEEESCTTCCHHHHHHHHHHHH-----HTTCCSEEEEEECCCHHHHHHHTTSCEEEEESCHHHHHHHHHHH
T ss_pred CEEEeCCCcEEEeecCCccceeeehhHHHHh-----hhcCCCEEEEecchHHHHHHHhCCCceEEEeCCHHHHHHHHHHH
Confidence 45666667776655555544332 23455554554 1100 123333 468899999998887
Q ss_pred HhhcCC
Q 045912 209 KSLLGP 214 (218)
Q Consensus 209 ~~~~G~ 214 (218)
+. .|+
T Consensus 391 ~~-~ge 395 (484)
T 1lam_A 391 IE-TGD 395 (484)
T ss_dssp HH-HSC
T ss_pred HH-HCC
Confidence 65 454
No 60
>2hc9_A Leucine aminopeptidase 1; carbonate, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics; 1.85A {Caenorhabditis elegans} PDB: 2hb6_A
Probab=84.10 E-value=7.3 Score=33.48 Aligned_cols=184 Identities=13% Similarity=0.052 Sum_probs=98.0
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeec-------CCCceEEEEecCC-CCcEEEEEeeCCCCCcc
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCP-------LVKTGIVAKIGSG-SHPFIALRADMDALPLQ 92 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~-------~~~~~via~~~~~-~~~~i~~~~h~D~vp~~ 92 (218)
..+-+.+.|+|++.|.--..=...++++.+.+++.|++++.. .+-.+|.+.=.+. ..|.++..-+- |.+
T Consensus 166 ~a~~~~~aR~L~n~P~n~~tP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~---~~~ 242 (491)
T 2hc9_A 166 LSESVRETARLIDTPANILTTDALVDEAVKVGNATGSKITVIRGEELLKAGFGGIYHVGKAGPTPPAFVVLSHE---VPG 242 (491)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHTTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEEC---CTT
T ss_pred HHHHHHHHHHHhcCCchhCCHHHHHHHHHHHHhhcCcEEEEEeHHHHHhCCCCcEEEecccCCCCCEEEEEEeC---CCC
Confidence 345678999999998655555677889999999999987652 1112233322121 22443333221 111
Q ss_pred cc-------CCCCccccCCCc-c-cc---cCC--c-HHHHHHHHHHHHHHhhcccCC-------CCCccCCeEE------
Q 045912 93 EL-------VNWEHKSKIDGK-M-HA---CGH--D-APTTMLLGEAKLLHRRKDQLN-------AADVISPRAE------ 144 (218)
Q Consensus 93 ~~-------~~~pf~~~~~g~-~-~~---~G~--d-~~~a~ll~aa~~L~~~~~~~~-------~~NvIPd~a~------ 144 (218)
+. .+.-|.+ .|. + .+ .+| | +|.|+++++++++.+.+.+.. .-|.|.+.+.
T Consensus 243 ~~~~i~LVGKGiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~l~vnv~~~l~~~ENm~sg~A~rPgDVi 320 (491)
T 2hc9_A 243 STEHIALVGKGVVYDT--GGLQIKTKTGMPNMKRDMGGAAGMLEAYSALVKHGFSQTLHACLCIVENNVSPIANKPDDII 320 (491)
T ss_dssp CSCEEEEEEEEEEEEC--CTTSCCCTTTSTTGGGGGHHHHHHHHHHHHHHTTTCCSEEEEEEEEEEECCSTTSCCTTCEE
T ss_pred CCCcEEEEcCceEecC--CCccCCCCcChhhccccccHHHHHHHHHHHHHHcCCCceEEEEEEeeecCCCCCCCCCCCEE
Confidence 00 0111211 110 0 11 233 3 899999999999998764332 3343333332
Q ss_pred -----EEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe---eecc----cCCCCc-ccCCHHHHHHHHHHHHhh
Q 045912 145 -----FGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF---QVEE----FPLIPA-ALDNDSLYLLVERVGKSL 211 (218)
Q Consensus 145 -----~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~---~~~~----~~~~p~-~~~d~~l~~~l~~~~~~~ 211 (218)
.+++|...+.|-+--+-+.+-... +.++.+.-|+. +|.+ -..+.. +.||+.+.+.+.++.+.
T Consensus 321 ts~~GkTVEV~NTDAEGRLvLADaL~yA~----~~~~p~~iiD~ATLTGA~~vALG~~~ag~~sn~d~l~~~l~~Ag~~- 395 (491)
T 2hc9_A 321 KMLSGKTVEINNTDAEGRLILADGVFYAK----ETLKATTIFDMATLTGAQAWLSGRLHGAAMTNDEQLENEIIKAGKA- 395 (491)
T ss_dssp ECTTSCEEECSCTTCCHHHHHHHHHHHHH----HTTCCSEEEEEECCCTTHHHHHTTTSEEEEESCHHHHHHHHHHHHH-
T ss_pred EeCCCcEEEEecCCccceeeehhHHHHHh----hhcCCCEEEEecchHHHHHHHhCCCcEEEEECcHHHHHHHHHHHHH-
Confidence 446666667766555555443322 12344554544 1100 112333 46789999999888765
Q ss_pred cCC
Q 045912 212 LGP 214 (218)
Q Consensus 212 ~G~ 214 (218)
.|+
T Consensus 396 ~ge 398 (491)
T 2hc9_A 396 SGD 398 (491)
T ss_dssp HSC
T ss_pred hCC
Confidence 354
No 61
>1gyt_A Cytosol aminopeptidase; hydrolase, DNA recombination; 2.5A {Escherichia coli} SCOP: c.56.5.3 c.50.1.1
Probab=82.16 E-value=1.5 Score=37.95 Aligned_cols=184 Identities=14% Similarity=0.079 Sum_probs=98.8
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcC--Cceeec-------CCCceEEEEecC-CCCcEEEEEeeCC---
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKLG--ITYSCP-------LVKTGIVAKIGS-GSHPFIALRADMD--- 87 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G--~~~~~~-------~~~~~via~~~~-~~~~~i~~~~h~D--- 87 (218)
..+-+.+.|+|++.|.--..=...+++..+.++++| ++++.. .+-..|.+.=.+ ...|.++..-+-=
T Consensus 180 ~a~~~~laRdL~n~P~N~~tP~~lA~~a~~la~~~g~~~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~Y~g~~~ 259 (503)
T 1gyt_A 180 IAAGIKAAKDLGNMPPNICNAAYLASQARQLADSYSKNVITRVIGEQQMKELGMHSYLAVGQGSQNESLMSVIEYKGNAS 259 (503)
T ss_dssp HHHHHHHHHHHHHSCTTTCSHHHHHHHHHHHHHHTTTTEEEEEECHHHHHHTTCHHHHHHHHTSSSCCEEEEEEEECCCC
T ss_pred HHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHHhcCCceEEEEEcHHHHHHCCCCceeeecccCCCCCeEEEEEECCCCC
Confidence 345678999999999754455667888888899999 887652 122223333211 1223333221110
Q ss_pred --CCC---ccccCCCCccccCCCc-c-cccC---C--c-HHHHHHHHHHHHHHhhcccCC-------CCCccCCeEE---
Q 045912 88 --ALP---LQELVNWEHKSKIDGK-M-HACG---H--D-APTTMLLGEAKLLHRRKDQLN-------AADVISPRAE--- 144 (218)
Q Consensus 88 --~vp---~~~~~~~pf~~~~~g~-~-~~~G---~--d-~~~a~ll~aa~~L~~~~~~~~-------~~NvIPd~a~--- 144 (218)
.=| +| .+.-|.+ .|. + .+-| | | +|.|+++++++++.+++.+.. .-|.|.+.+.
T Consensus 260 ~~~~~i~LVG--KGITFDs--GGislKp~~~M~~MK~DM~GAAaVlg~~~aia~l~l~vnV~~~i~~~ENm~sg~A~rPg 335 (503)
T 1gyt_A 260 EDARPIVLVG--KGLTFDS--GGISIKPSEGMDEMKYDMCGAAAVYGVMRMVAELQLPINVIGVLAGCENMPGGRAYRPG 335 (503)
T ss_dssp TTCCCEEEEE--EEEEEEC--CTTSCCCSTTGGGGGGGGHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEECCSTTCCCTT
T ss_pred CCCCcEEEEc--CceEecC--CCccccCCcChhhcccccchHHHHHHHHHHHHHcCCCeeEEEEEEeeccCCCCCCCCCC
Confidence 000 01 1111211 111 0 1223 3 3 899999999999998875433 3344433333
Q ss_pred --------EEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe---eecc----cCCCCc-ccCCHHHHHHHHHHH
Q 045912 145 --------FGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF---QVEE----FPLIPA-ALDNDSLYLLVERVG 208 (218)
Q Consensus 145 --------~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~---~~~~----~~~~p~-~~~d~~l~~~l~~~~ 208 (218)
.+++|...+.|-+--+-+.+-.. +.++-+.-|+. +|.+ -..+.. +.||+.+.+.+.++.
T Consensus 336 DVits~~GkTVEV~NTDAEGRLVLADaL~yA-----~~~~P~~iID~ATLTGA~~vALG~~~ag~~sn~d~l~~~l~~Ag 410 (503)
T 1gyt_A 336 DVLTTMSGQTVEVLNTDAEGRLVLCDVLTYV-----ERFEPEAVIDVATLTGACVIALGHHITGLMANHNPLAHELIAAS 410 (503)
T ss_dssp CEEECTTSCEEECSCTTCCHHHHHHHHHHHG-----GGGCCSEEEEEECCCHHHHHHHTTTSEEEEESCHHHHHHHHHHH
T ss_pred CEEEeCCCcEEEecCCCcchhhHhHHHHHHH-----HHcCCCEEEEhhhhHHHHHHHhCCCceEEEeCCHHHHHHHHHHH
Confidence 44566666666655555444332 23455555554 1100 122333 468899999998887
Q ss_pred HhhcCC
Q 045912 209 KSLLGP 214 (218)
Q Consensus 209 ~~~~G~ 214 (218)
+. .|+
T Consensus 411 ~~-~ge 415 (503)
T 1gyt_A 411 EQ-SGD 415 (503)
T ss_dssp HH-HTC
T ss_pred HH-hCC
Confidence 65 455
No 62
>2glj_A Probable M18-family aminopeptidase 1; aminopeptidase I, NYSGXRC, structural genomics, PSI, protein structure initiative; 3.20A {Clostridium acetobutylicum}
Probab=81.28 E-value=0.28 Score=42.10 Aligned_cols=50 Identities=12% Similarity=0.044 Sum_probs=33.3
Q ss_pred hHHHHHHHHHHHHhcCCc-eee---c-----CC-------Cce-EEEEecCCC---CcEEEEEeeCCCCC
Q 045912 41 VHNTNALIRSELDKLGIT-YSC---P-----LV-------KTG-IVAKIGSGS---HPFIALRADMDALP 90 (218)
Q Consensus 41 E~~~a~~i~~~L~~~G~~-~~~---~-----~~-------~~~-via~~~~~~---~~~i~~~~h~D~vp 90 (218)
++.+.+++.+.|++.||+ +.. . ++ ..| ++|...+++ .+.+++.||||.+-
T Consensus 37 ~~hav~~~~~~l~~sGfe~l~e~~~~~w~l~~g~~~~~~~~g~slia~~~G~~~~~~g~~ii~AH~Dspg 106 (461)
T 2glj_A 37 ERECVTELIKTAEKSGYRNIEDILAKGETLKEGDKVYANNRGKGLIMFLIGKEPLYTGFKILGAHIDSPR 106 (461)
T ss_dssp CSSTHHHHHHHSCCSSCCCTTCCCSTTTTCCTTCCCEEEETTTEEEECCCCSSCGGGCCEEEEEECCCCB
T ss_pred HHHHHHHHHHHHHHcCChhHHHHhhHhhccCCCCEEEEEcCCCEEEEEEeCCcCccCCceEEEEecCcCC
Confidence 457889999999999997 111 0 01 133 888653321 23599999999984
No 63
>3kzw_A Cytosol aminopeptidase; hydrolase, manganese binding, protease, structural genomics; 2.70A {Staphylococcus aureus subsp}
Probab=78.66 E-value=1.4 Score=38.11 Aligned_cols=184 Identities=12% Similarity=0.046 Sum_probs=97.9
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeec-------CCCceEEEEecCC-CCcEEEEEeeCCC----
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCP-------LVKTGIVAKIGSG-SHPFIALRADMDA---- 88 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~-------~~~~~via~~~~~-~~~~i~~~~h~D~---- 88 (218)
..+-+.+.|+|++.|.--..=...++++.+.+++.|++++.. .+-..+.+.=.+. ..|.++..-.-=.
T Consensus 196 ~a~~~~~aRdL~n~P~n~ltP~~~a~~a~~~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~~ 275 (515)
T 3kzw_A 196 IGQSINLARDFSNMPPNVLTPQTFAEDIVNHFKNTKVKVDVKDYDTLVSEGFGLLQAVGKGSKHKPRLVTITYNGKDKDE 275 (515)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHSTTSSCEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEESSCSSC
T ss_pred HHHHHHHHHHHhcCCccccCHHHHHHHHHHHHHhcCcEEEEEcHHHHHHcCCCcEEEEccCCCCCCEEEEEEECCCCCCC
Confidence 345678999999999755555677888889999999988652 1222233322111 1233332221100
Q ss_pred CC---ccccCCCCccccCCCc-----ccccCC--c-HHHHHHHHHHHHHHhhcccCC-------CCCccCCeEE------
Q 045912 89 LP---LQELVNWEHKSKIDGK-----MHACGH--D-APTTMLLGEAKLLHRRKDQLN-------AADVISPRAE------ 144 (218)
Q Consensus 89 vp---~~~~~~~pf~~~~~g~-----~~~~G~--d-~~~a~ll~aa~~L~~~~~~~~-------~~NvIPd~a~------ 144 (218)
=| +| .+.-|.+ .|. .+-.+| | +|.|+++++++++.+.+.+.. .-|.|.+.+.
T Consensus 276 ~~i~LVG--KGiTFDs--GG~slKp~~~M~~MK~DM~GAAaVlg~~~a~a~l~lpvnv~~~i~~~ENm~sg~A~rPgDVi 351 (515)
T 3kzw_A 276 APIALVG--KGITYDS--GGYSIKTKNGMATMKFDMCGAANVVGIIEAASRLQLPVNIVGVLACAENMINEASMKPDDVF 351 (515)
T ss_dssp CCEEEEE--EEEEEEC--CTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTTCSCEEEEEEEEEEECCCTTCCCTTCEE
T ss_pred CcEEEec--CceEEec--CCcCCCCccChhhchhchHHHHHHHHHHHHHHHcCCCceEEEEEEeeccCCCCCCCCCCCEE
Confidence 00 01 0111211 110 011344 3 899999999999998775433 3343333332
Q ss_pred -----EEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe---eecc----cCCCCccc--CCHHHHHHHHHHHHh
Q 045912 145 -----FGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF---QVEE----FPLIPAAL--DNDSLYLLVERVGKS 210 (218)
Q Consensus 145 -----~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~---~~~~----~~~~p~~~--~d~~l~~~l~~~~~~ 210 (218)
.+++|...+.|-+--+-+.+-.. +.++.+.-|+. +|.+ -..+..+. +++.+.+.+.++.+.
T Consensus 352 ts~~GkTVEV~NTDAEGRLvLADaL~yA-----~~~~p~~iiD~ATLTGA~~vALG~~~ag~~~~n~d~l~~~l~~a~~~ 426 (515)
T 3kzw_A 352 TALSGETVEVMNTDAEGRLVLADAVFYA-----NQYQPSVIMDFATLTGAAIVALGDDKAAAFESNSKVILNDILQISSE 426 (515)
T ss_dssp ECTTSCEEECSCTTCCHHHHHHHHHHHH-----HTTCCSEEEEEECCCHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred EeCCCCEEEecCCCcchheehHHHHHHH-----hhcCCCEEEEeecchHHHHHHcCCceeEEeeCChHHHHHHHHHHHHH
Confidence 45666666766655555554332 23455554553 1100 12344443 468888888887765
Q ss_pred hcCC
Q 045912 211 LLGP 214 (218)
Q Consensus 211 ~~G~ 214 (218)
.|+
T Consensus 427 -~ge 429 (515)
T 3kzw_A 427 -VDE 429 (515)
T ss_dssp -TTC
T ss_pred -hCC
Confidence 455
No 64
>3ij3_A Cytosol aminopeptidase; PEPB, peptidase M17 family, IDP01962 aminopeptidase, hydrolase, manganese, metal-binding, protea structural genomics; HET: PGE PG4; 1.80A {Coxiella burnetii}
Probab=78.39 E-value=1 Score=38.51 Aligned_cols=181 Identities=14% Similarity=0.076 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecC------CCceEEEEecCC-CCcEEEEEeeCCCCCcccc
Q 045912 22 NWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPL------VKTGIVAKIGSG-SHPFIALRADMDALPLQEL 94 (218)
Q Consensus 22 ~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~------~~~~via~~~~~-~~~~i~~~~h~D~vp~~~~ 94 (218)
.+-+.+.|+|++.|.--..=...++++.+.+++.|++++... +-.+|.+.=.+. ..|.++..-. . |.
T Consensus 167 a~~~~laRdLvn~P~N~~tP~~~A~~a~~la~~~g~~v~V~~~~~~~~gmg~~laVg~GS~~pPrli~l~y--~-~~--- 240 (482)
T 3ij3_A 167 LTTIYLIRDLINTPAEDMGPSELAQAVKHVAKEFEAKVKIIESKDLETEFPAIYAVGRAGSRPPLLIDLKW--G-DI--- 240 (482)
T ss_dssp HHHHHHHHHHHHSCGGGSSHHHHHHHHHHHHHHHTCEEEEEEHHHHHHHCHHHHHHHTTSSSCCEEEEEEE--S-CT---
T ss_pred HHHHHHHHHHhcCCccccCHHHHHHHHHHHHHHcCCeEEEEchHHHHcCCCcEEEEccCCCCCCEEEEEEe--C-CC---
Confidence 356889999999997544556678888888899999876421 112233322221 2344443333 1 11
Q ss_pred CCCCccccCCCcc------------cccCC--c-HHHHHHHHHHHHHHhhcccCC-------CCCccCCeEE--------
Q 045912 95 VNWEHKSKIDGKM------------HACGH--D-APTTMLLGEAKLLHRRKDQLN-------AADVISPRAE-------- 144 (218)
Q Consensus 95 ~~~pf~~~~~g~~------------~~~G~--d-~~~a~ll~aa~~L~~~~~~~~-------~~NvIPd~a~-------- 144 (218)
...|..-...|+. .-.+| | +|.|+++++++++.+.+.+.. .-|.|.+.+.
T Consensus 241 ~~~~i~LVGKGITFDsGGlslKp~~~M~~MK~DMgGAAaVlg~~~aia~l~lpvnv~~ii~~~ENm~sg~A~rPgDVits 320 (482)
T 3ij3_A 241 KAPKVTLVGKGVCFDSGGLDIKTPGGMLLMKKDMGGAAHALGLARMIMLQQLPVRLRLLIPAVENAIGSRSYRPGDVVQT 320 (482)
T ss_dssp TSCEEEEEECEEEEECCTTSCCCHHHHTTGGGGGHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEECCSTTCCCTTCEEEC
T ss_pred CCCeEEEEccceEeecCCccCcCccchhhccccchHHHHHHHHHHHHHHcCCCceEEEEEEeeccCCCCCCCCCCCEEEe
Confidence 1112111111111 11234 3 899999999999998765432 3344333332
Q ss_pred ---EEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe---eeccc----CCCCc-ccCCHHHHHHHHHHHHhhcC
Q 045912 145 ---FGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF---QVEEF----PLIPA-ALDNDSLYLLVERVGKSLLG 213 (218)
Q Consensus 145 ---~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~---~~~~~----~~~p~-~~~d~~l~~~l~~~~~~~~G 213 (218)
.+++|...+.|-+--+-+.+-.. ..++.+.-|+. +|.+. ..+.. +.||+.+.+.+.++.+. .|
T Consensus 321 ~~GkTVEV~NTDAEGRLVLADaL~yA-----~~~~P~~iID~ATLTGA~~vALG~~~agv~sn~d~l~~~l~~Ag~~-~g 394 (482)
T 3ij3_A 321 RARKTIEITNTDAEGRVVLADALAEA-----VKEDPDLIIDFSTLTGAARIALGPNLPALFANQDSLAQALIDASLK-TD 394 (482)
T ss_dssp TTSCEEECSCTTCCHHHHHHHHHHHH-----HTTCCSEEEEEEECCSGGGCTTCTTSCEEEESSHHHHHHHHHHHHH-HT
T ss_pred CCCCEEEEecCCcchhhhhHHHHHHH-----HhcCCCEEEEecchhhhHHHHhCCCceEEEeCCHHHHHHHHHHHHH-HC
Confidence 45666767776665555554432 23455544443 11111 12333 45788999999888865 45
Q ss_pred C
Q 045912 214 P 214 (218)
Q Consensus 214 ~ 214 (218)
+
T Consensus 395 e 395 (482)
T 3ij3_A 395 D 395 (482)
T ss_dssp C
T ss_pred C
Confidence 5
No 65
>3h8g_F Cytosol aminopeptidase; hydrolase, manganese, metal-binding, proteas; HET: BES; 1.50A {Pseudomonas putida} PDB: 3h8e_A 3h8f_A*
Probab=78.02 E-value=1.9 Score=37.19 Aligned_cols=184 Identities=12% Similarity=0.023 Sum_probs=99.1
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhc-CCceeec-------CCCceEEEEecCC-CCcEEEEEeeCC----
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKL-GITYSCP-------LVKTGIVAKIGSG-SHPFIALRADMD---- 87 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~-G~~~~~~-------~~~~~via~~~~~-~~~~i~~~~h~D---- 87 (218)
..+-+.+.|+|++.|.--..=...++++.+.++++ |++++.. .+-.++.+.=.+. ..|.++..-+-=
T Consensus 179 ~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 258 (497)
T 3h8g_F 179 IATGMAFTRDLGNLPPNLCHPSFLAEQAKELGKAHKALKVEVLDEKKIKDLGMGAFYAVGQGSDQPPRLIVLNYQGGKKA 258 (497)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHCTTEEEEEECHHHHHHTTCHHHHHHHTTSSSCCEEEEEEEECSCTT
T ss_pred HHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEEccCCCCCCEEEEEEECCCCCC
Confidence 34568899999999975555567788899999998 9987652 1112233322111 123332221110
Q ss_pred CCC---ccccCCCCccccCCCc-c-cc---cCC--c-HHHHHHHHHHHHHHhhcccCC-------CCCcc------CCeE
Q 045912 88 ALP---LQELVNWEHKSKIDGK-M-HA---CGH--D-APTTMLLGEAKLLHRRKDQLN-------AADVI------SPRA 143 (218)
Q Consensus 88 ~vp---~~~~~~~pf~~~~~g~-~-~~---~G~--d-~~~a~ll~aa~~L~~~~~~~~-------~~NvI------Pd~a 143 (218)
.=| +| .+.-|.+ .|. + .+ .+| | +|.|+++++++++.+.+.+.. .-|.| |+.+
T Consensus 259 ~~~i~LVG--KGiTFDs--GG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~l~vnv~~~i~~~ENm~~g~A~rPgDV 334 (497)
T 3h8g_F 259 DKPFVLVG--KGITFDT--GGISLKPGAGMDEMKYDMCGAASVFGTLRAVLELQLPVNLVCLLACAENMPSGGATRPGDI 334 (497)
T ss_dssp SCCEEEEE--EEEEEEC--CTTSCCCSTTGGGGGGTTHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEECCSTTSCCTTEE
T ss_pred CCcEEEEc--CceEecc--CCccCCCccchhhccccchHHHHHHHHHHHHHHcCCCeEEEEEEEeeccCCCCCCCCCCCE
Confidence 000 01 0111211 110 0 11 223 3 899999999999998875433 33433 4333
Q ss_pred E-----EEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe---eecc----cCCCCc-ccCCHHHHHHHHHHHHh
Q 045912 144 E-----FGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF---QVEE----FPLIPA-ALDNDSLYLLVERVGKS 210 (218)
Q Consensus 144 ~-----~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~---~~~~----~~~~p~-~~~d~~l~~~l~~~~~~ 210 (218)
. .+++|...+.|-+--+-+.+-.. +.++-+.-|+. +|.+ -..+.. +.||+.+.+.+.++.+.
T Consensus 335 it~~~G~TVEV~NTDAEGRLvLADaL~ya-----~~~~p~~iiD~ATLTGa~~vALG~~~~g~~sn~d~l~~~l~~ag~~ 409 (497)
T 3h8g_F 335 VTTMSGQTVEILNTDAEGRLVLCDTLTYA-----ERFKPQAVIDIATLTGACIVALGSHTTGLMGNNDDLVGQLLDAGKR 409 (497)
T ss_dssp EECTTSCEEEESCTTCCHHHHHHHHHHHH-----GGGCCSEEEEEECCCHHHHHHHTTTSEEEEESCHHHHHHHHHHHHH
T ss_pred EEeCCCcEEEecCCCchhhhhhHHHHHHH-----HhcCCCEEEEecccHHHHHHHhCCCceEEEECCHHHHHHHHHHHHH
Confidence 2 45666777776655555554332 23555555554 1100 122333 46789999999888765
Q ss_pred hcCC
Q 045912 211 LLGP 214 (218)
Q Consensus 211 ~~G~ 214 (218)
.|+
T Consensus 410 -~ge 412 (497)
T 3h8g_F 410 -ADD 412 (497)
T ss_dssp -HTC
T ss_pred -hCC
Confidence 354
No 66
>3pei_A Cytosol aminopeptidase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta sandwich; HET: MSE; 2.70A {Francisella tularensis subsp}
Probab=77.38 E-value=2.2 Score=36.66 Aligned_cols=184 Identities=13% Similarity=0.069 Sum_probs=93.8
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhc-CCceeec-------CCCceEEEEecCC-CCcEEEEEeeC--C--
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKL-GITYSCP-------LVKTGIVAKIGSG-SHPFIALRADM--D-- 87 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~-G~~~~~~-------~~~~~via~~~~~-~~~~i~~~~h~--D-- 87 (218)
..+-+.+.|+|++.|.--..=...++++.+.++++ |++++.. .+-..+.+.=.+. ..|.++..-.- +
T Consensus 163 ~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~l~~~~~g~~v~V~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 242 (486)
T 3pei_A 163 IACGQNYAKDLQNLPANICTTDYMLNEARELTSKYATFSLDYLDQDAMAELGMGCALAVGRGSYMSNYTVCMEYKGGNEG 242 (486)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHTCTTEEEEEECHHHHHHTTCHHHHHHHTTCSSCCEEEEEEEECSCTT
T ss_pred HHHHHHHHHHHhcCChhhcCHHHHHHHHHHHHhhcCCceEEEEeHHHHHhCCCCcEEEeccCCCCCCEEEEEEECCCCCC
Confidence 34568899999999975555567788888988988 8887652 1222233322111 12333322211 0
Q ss_pred CCC---ccccCCCCccccCCCc-c-cc---cCC--c-HHHHHHHHHHHHHHhhcccCC-------CCCccCCeEE-----
Q 045912 88 ALP---LQELVNWEHKSKIDGK-M-HA---CGH--D-APTTMLLGEAKLLHRRKDQLN-------AADVISPRAE----- 144 (218)
Q Consensus 88 ~vp---~~~~~~~pf~~~~~g~-~-~~---~G~--d-~~~a~ll~aa~~L~~~~~~~~-------~~NvIPd~a~----- 144 (218)
.=| +| .+.-|.+ .|. + .+ .+| | +|.|+++++++++.+.+.+.. .-|.|.+.+.
T Consensus 243 ~~~i~LVG--KGiTFDs--GG~slKp~~~M~~Mk~DM~GAAaVlg~~~a~a~l~l~vnv~~~i~~~ENm~sg~A~rPgDV 318 (486)
T 3pei_A 243 DAPIVLVG--KGLVFDN--GGICIKQAAGMDSMKMDMGGVAAVMGTMKAIAMLNLPVNVVGVMGLAENAVDARSYRPGDV 318 (486)
T ss_dssp SCCEEEEE--EEEETEE--CC------------EECSHHHHHHHHHHHHHHHHTCSSEEEEEEEEEEC------CCTTEE
T ss_pred CCcEEEEc--cceEEec--CCcccCCccchhhhhccchHHHHHHHHHHHHHHcCCCcEEEEEEEeeccCCCCCCCCCCCE
Confidence 000 01 0111221 111 0 12 233 3 899999999999998875433 3444444433
Q ss_pred ------EEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe---eecc----cCCCCc-ccCCHHHHHHHHHHHHh
Q 045912 145 ------FGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF---QVEE----FPLIPA-ALDNDSLYLLVERVGKS 210 (218)
Q Consensus 145 ------~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~---~~~~----~~~~p~-~~~d~~l~~~l~~~~~~ 210 (218)
.+++|...+.|-+--+-+.+-.. ..++-+.-|+. +|.+ -..+.. +.||+.+.+.+.++.+.
T Consensus 319 its~~G~TVEV~NTDAEGRLvLADaL~ya-----~~~~p~~iiD~ATLTGA~~vALG~~~~g~~sn~d~l~~~l~~ag~~ 393 (486)
T 3pei_A 319 LKSMKGITVEVSNTDAEGRLVLCDTLTYI-----GKYKPKAVIDLATLTGAMIISLGDAYSGMFANSDKLANSLEQAANA 393 (486)
T ss_dssp EECTTCCEEEECCGGGHHHHHHHHHHHHG-----GGGCCSEEEEEECCCTHHHHHHTTSCEEEEESCHHHHHHHHHHHHH
T ss_pred EEeCCCcEEEEeccCcccceeehhHHHHH-----HhhCCCEEEEehhhHHHHHHHhCCCceEEEeCCHHHHHHHHHHHHH
Confidence 34556666666554444444322 23455554554 1100 122333 46889999999888765
Q ss_pred hcCC
Q 045912 211 LLGP 214 (218)
Q Consensus 211 ~~G~ 214 (218)
.|+
T Consensus 394 -~ge 396 (486)
T 3pei_A 394 -SND 396 (486)
T ss_dssp -HCC
T ss_pred -HCC
Confidence 354
No 67
>3iib_A Peptidase M28; YP_926796.1, structural genomics, J center for structural genomics, JCSG, protein structure INI PSI-2; HET: PGE; 1.70A {Shewanella amazonensis SB2B}
Probab=75.56 E-value=6.2 Score=33.40 Aligned_cols=56 Identities=13% Similarity=0.028 Sum_probs=36.5
Q ss_pred chHHHHHHHHHHHHh--HHHHHHHHHHHH-hC-C--CCCCChHHHHHHHHHHHHhcCC-ceee
Q 045912 6 DEAFADQILIETERD--KNWLISIRRQIH-EN-P--ELRFEVHNTNALIRSELDKLGI-TYSC 61 (218)
Q Consensus 6 ~~~~~~~i~~~i~~~--~~~~~~~~~~L~-~~-p--e~~~~E~~~a~~i~~~L~~~G~-~~~~ 61 (218)
|+..+..+.+.+++- ..++.++++.|. .+ | .-|..+.++++|+.+.|+++|+ ++..
T Consensus 3 ~~~~~~~~~~i~~~~~~~~~~~~~l~~l~~~~G~R~~GS~g~~~a~~~i~~~l~~~G~~~v~~ 65 (444)
T 3iib_A 3 DDINQKVAEQLAQKAQSSSLGYDIVESLTVEVGPRLAGSEQDKVAVDWAIAKLQSLGFDRVYK 65 (444)
T ss_dssp HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHTCCCCTTSHHHHHHHHHHHHHHHHTTCSEEEE
T ss_pred CcchHHHHHHHHHHHhcccHHHHHHHHHHhccCCCCCCCHHHHHHHHHHHHHHHHcCCCceEe
Confidence 344444444444432 235777788887 33 2 2345689999999999999999 4654
No 68
>3jru_B Probable cytosol aminopeptidase; bacterial blight, XOO0834, PEPA, xanthomonas oryzae PV. ORYZ KACC10331, hydrolase, manganese; 2.60A {Xanthomonas oryzae PV}
Probab=75.21 E-value=14 Score=31.69 Aligned_cols=184 Identities=14% Similarity=0.060 Sum_probs=98.6
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhc-CCceeec-------CCCceEEEEecCC-CCcEEEEEeeC---CC
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKL-GITYSCP-------LVKTGIVAKIGSG-SHPFIALRADM---DA 88 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~-G~~~~~~-------~~~~~via~~~~~-~~~~i~~~~h~---D~ 88 (218)
..+-+.+.|+|++.|.--..=...+++..+.++++ |++++.. .+-.++.+.=.+. ..|.++..-+- +.
T Consensus 175 ~a~~~~~aRdL~n~P~n~~~P~~~a~~a~~~~~~~~g~~v~v~~~~~l~~~gmg~~laVg~gS~~pPrli~l~y~g~~~~ 254 (490)
T 3jru_B 175 TAEGVEFARELGNLPPNYCTPAYLADTAAAFAGKFPGAEAEILDEAQMEALGMGSLLSVARGSANRPRLIVLKWNGGGDA 254 (490)
T ss_dssp HHHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHTTSTTEEEEEECHHHHHHTTCHHHHHHHHTCSSCCEEEEEEEETTTTS
T ss_pred HHHHHHHHHHhhcCCccccCHHHHHHHHHHHHhhcCCCeEEEEcHHHHHhCCCCcEEEEccCCCCCCEEEEEEEcCCCCC
Confidence 34568899999999975555567788888888887 8887652 1222233322111 22333322211 00
Q ss_pred CC---ccccCCCCccccCCCc-c-cccC---C--c-HHHHHHHHHHHHHHhhcccCC-------CCCccCCeEE------
Q 045912 89 LP---LQELVNWEHKSKIDGK-M-HACG---H--D-APTTMLLGEAKLLHRRKDQLN-------AADVISPRAE------ 144 (218)
Q Consensus 89 vp---~~~~~~~pf~~~~~g~-~-~~~G---~--d-~~~a~ll~aa~~L~~~~~~~~-------~~NvIPd~a~------ 144 (218)
=| +| .+.-|.+ .|. + .+.| | | +|.|+++++++++.+.+.+.. .-|.|.+.+.
T Consensus 255 ~~i~LVG--KGiTFDs--GG~slKp~~~M~~Mk~DM~GAAaV~g~~~a~a~l~l~vnv~~~i~~~ENm~sg~A~rPgDVi 330 (490)
T 3jru_B 255 RPYVLVG--KGITFDT--GGVNLKTQGGIEEMKYDMCGGATVIGTFVATVKAELPINLVVVVPAVENAIDGNAYRPSDVI 330 (490)
T ss_dssp CCEEEEE--CEEEEEC--CTTSCCCSSCGGGGGGGGHHHHHHHHHHHHHHHTTCSSEEEEEEEEEEECCSTTCCCTTCEE
T ss_pred CcEEEEc--CeeEecC--CCccCCCcccHhhCcccchHHHHHHHHHHHHHHcCCCcEEEEEEEeeccCCCCCCCCCCCEE
Confidence 00 01 1111221 110 0 1222 3 3 899999999999998775433 3344433332
Q ss_pred -----EEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe---eecc----cCCCCc-ccCCHHHHHHHHHHHHhh
Q 045912 145 -----FGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF---QVEE----FPLIPA-ALDNDSLYLLVERVGKSL 211 (218)
Q Consensus 145 -----~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~---~~~~----~~~~p~-~~~d~~l~~~l~~~~~~~ 211 (218)
.+++|...+.|-+--+-+.+-.. +.++-+.-|+. +|.+ -..+.. +.||+.+.+.+.++.+.
T Consensus 331 t~~~G~TVEV~NTDAEGRLvLADaL~ya-----~~~~p~~iiD~ATLTGa~~vALG~~~~g~~sn~d~l~~~l~~ag~~- 404 (490)
T 3jru_B 331 TSMSGKTIEVGNTDAEGRLILCDALTYA-----ERFNPEALVDVATLTGACMVALGHQTAGLMSKHDDLANELLAAGEH- 404 (490)
T ss_dssp ECTTSCEEECSCTTCCHHHHHHHHHHHH-----GGGCCSEEEEEECCCHHHHHHHTTTCEEEEESCHHHHHHHHHHHHH-
T ss_pred EecCCcEEEecCCCchHhHHHHHHHHHH-----hhcCCCEEEEEcchHHHHHHHhCCCcEEEEeCCHHHHHHHHHHHHH-
Confidence 44666666666655555544332 23555555554 1100 122333 46889999999888765
Q ss_pred cCC
Q 045912 212 LGP 214 (218)
Q Consensus 212 ~G~ 214 (218)
.|+
T Consensus 405 ~ge 407 (490)
T 3jru_B 405 VFD 407 (490)
T ss_dssp TTC
T ss_pred hCC
Confidence 454
No 69
>4efd_A Aminopeptidase; structural genomics, structural genomics consortium, SGC, hydrolase; 2.45A {Trypanosoma brucei brucei}
Probab=74.45 E-value=1.7 Score=37.56 Aligned_cols=185 Identities=10% Similarity=0.020 Sum_probs=97.4
Q ss_pred HHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeecC-------CCceEEEEecCC-CCcEEEEEeeCCCCC----
Q 045912 23 WLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCPL-------VKTGIVAKIGSG-SHPFIALRADMDALP---- 90 (218)
Q Consensus 23 ~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~~-------~~~~via~~~~~-~~~~i~~~~h~D~vp---- 90 (218)
+-+.+.|+|++.|.--..=...++++.+.++++|++++... +-.+|.+.=.+. ..|.++..-+-..=+
T Consensus 205 ~~~~laRdLvn~P~N~~tP~~lA~~a~~l~~~~gv~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~L~Y~g~~~~~~~ 284 (522)
T 4efd_A 205 TSTQLCQRLVDAPPNLLTTATFTEIAQGYAKALGFDVDVICGDDLCERGYGGIYSVGKAAFEAPRLVTLLYTPKGTPVKK 284 (522)
T ss_dssp HHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEEETHHHHHHTCHHHHHHHTTSSSCCEEEEEEECCSSCCSEE
T ss_pred HHHHHHHHHhcCCchhCCHHHHHHHHHHHHHHcCCEEEEEeHHHHHHcCCCcEEeeccCCCCCCEEEEEEECCCCCCCCc
Confidence 46789999999997655566778889999999999876521 112233321111 123333222211000
Q ss_pred ---ccccCCCCccccCCCc-----ccccCC--c-HHHHHHHHHHHHHHhhcccCC-------CCCcc------CCeEE--
Q 045912 91 ---LQELVNWEHKSKIDGK-----MHACGH--D-APTTMLLGEAKLLHRRKDQLN-------AADVI------SPRAE-- 144 (218)
Q Consensus 91 ---~~~~~~~pf~~~~~g~-----~~~~G~--d-~~~a~ll~aa~~L~~~~~~~~-------~~NvI------Pd~a~-- 144 (218)
+| ++.-|.+ .|. .+-.+| | +|.|+++++++++.+.+.+.. .-|.| |+.+.
T Consensus 285 iaLVG--KGITFDS--GGlsLKp~~~M~~MK~DMgGAAaVlga~~a~a~l~lpvnV~~vl~~~ENm~sg~A~rPgDVits 360 (522)
T 4efd_A 285 VSLVG--KGIVYDC--GGLALKPADYMKLMKHDMGGAAAVFCGFLTAVRLQQPVQLSCTLCLAENAIGPKSYRNDDIIVM 360 (522)
T ss_dssp EEEEE--EEEETCC--CCSSSCHHHHHHHGGGTTHHHHHHHHHHHHHHHHTCSEEEEEEEEEEECCC-CCSTTTTEEEEC
T ss_pred EEEec--CceEeec--CCccCCCccchhhcccccchHHHHHHHHHHHHHcCCCceEEEEEEEeccCCCCCCCCCCCEEEe
Confidence 01 0111211 110 011223 3 889999999999988764422 33444 33332
Q ss_pred ---EEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe---eecc----cCCCCc-ccCCHHHHHHHHHHHHhhcC
Q 045912 145 ---FGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF---QVEE----FPLIPA-ALDNDSLYLLVERVGKSLLG 213 (218)
Q Consensus 145 ---~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~---~~~~----~~~~p~-~~~d~~l~~~l~~~~~~~~G 213 (218)
.+++|...+.|-.--+-+.+-...+.. .+.-+.-|+. +|.+ -..+.. +.||+.+.+.+.++.+. .|
T Consensus 361 ~~GkTVEV~NTDAEGRLVLADaL~yA~~~~--~~~P~~iIDiATLTGA~~vALG~~~agvfsndd~l~~~l~~Ag~~-~g 437 (522)
T 4efd_A 361 KSGKTVEVINTDAEGRIVLGDGVFHATNEL--SFTPDVVIDMATLTGAQGIATGRHHAGLYVNEEGAEAAMLRAGRE-SG 437 (522)
T ss_dssp TTSCEEEESCTTCCHHHHHHHHHHHHHHTS--SSCCSEEEEEECCCTHHHHHHCSSCEEEEESCHHHHHHHHHHHHH-HS
T ss_pred cCCcEEEeccCCchhhhhHHHHHHHhhhcc--ccCCCEEEeeccchhhHHhhcCCCceEEeeCCHHHHHHHHHHHHh-hC
Confidence 456777777776665555554332210 1233444443 1100 122333 46889999999888765 35
Q ss_pred C
Q 045912 214 P 214 (218)
Q Consensus 214 ~ 214 (218)
+
T Consensus 438 E 438 (522)
T 4efd_A 438 E 438 (522)
T ss_dssp C
T ss_pred C
Confidence 4
No 70
>3fed_A Glutamate carboxypeptidase III; metallopeptidase, bimetallic active site, N-glycosylation, C cation, chloride anion, zinc IONS, dipept glycoprotein; HET: NAG BIX; 1.29A {Homo sapiens} PDB: 3fec_A* 3fee_A* 3ff3_A* 2c6c_A* 2c6g_A* 2c6p_A* 2cij_A* 2jbj_A* 2jbk_A* 3rbu_A* 3bi1_A* 2oot_A* 2pvv_A* 2pvw_A* 2xei_A* 2or4_A* 3bi0_A* 3bhx_A* 3d7d_A* 3d7f_A* ...
Probab=74.04 E-value=3 Score=37.67 Aligned_cols=51 Identities=16% Similarity=0.146 Sum_probs=39.6
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhCCCCCCC--hHHHHHHHHHHHHhcCCc-eee
Q 045912 9 FADQILIETERDKNWLISIRRQIHENPELRFE--VHNTNALIRSELDKLGIT-YSC 61 (218)
Q Consensus 9 ~~~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~--E~~~a~~i~~~L~~~G~~-~~~ 61 (218)
+.+.+.+.++. +.+.+.++.|-++|-+++. +.++++||.+.|+++|++ ++.
T Consensus 14 l~~~~~~~~~~--~~i~~~l~~lt~~ph~aGt~~~~~~a~yi~~~~~~~Gl~~v~~ 67 (707)
T 3fed_A 14 IRWKLVSEMKA--ENIKSFLRSFTKLPHLAGTEQNFLLAKKIQTQWKKFGLDSAKL 67 (707)
T ss_dssp HHHHHHHHCCH--HHHHHHHHHHSSSCCCTTSHHHHHHHHHHHHHHHHHTCSEEEE
T ss_pred HHHHHHHhCCH--HHHHHHHHHHhcCCCcCCCHhHHHHHHHHHHHHHHcCCCceeE
Confidence 34455555543 3688999999999988774 678899999999999998 654
No 71
>3k9t_A Putative peptidase; structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2, aminop hydrolase; 2.37A {Clostridium acetobutylicum}
Probab=65.32 E-value=18 Score=30.55 Aligned_cols=47 Identities=15% Similarity=0.066 Sum_probs=32.1
Q ss_pred ceEEEEe--cCCCCcEEEEEeeCCCCCccccCCCCccccCCCcccccCCc-HHHHHHHHHHHHHHhhc
Q 045912 66 TGIVAKI--GSGSHPFIALRADMDALPLQELVNWEHKSKIDGKMHACGHD-APTTMLLGEAKLLHRRK 130 (218)
Q Consensus 66 ~~via~~--~~~~~~~i~~~~h~D~vp~~~~~~~pf~~~~~g~~~~~G~d-~~~a~ll~aa~~L~~~~ 130 (218)
..-++.+ .|...+.|+|.+|+|+.. ++..+ +|+|+++..|+.|++..
T Consensus 166 ~l~y~e~~ipG~t~~~IllsaH~cHP~------------------~ANDNaSG~a~lleLar~l~~~~ 215 (435)
T 3k9t_A 166 SLTYGEYYIRGELEEEILLTTYTCHPS------------------MCNDNLSGVALITFIAKALSKLK 215 (435)
T ss_dssp EEEEEEEEECCSSSCEEEEEEECCCCS------------------CTTTTHHHHHHHHHHHHHHTTSC
T ss_pred ceEEEEEEecCCCCCEEEEEEEcCCCC------------------CCCccchHHHHHHHHHHHHhcCC
Confidence 3445555 554458999999999732 01222 78999999999998643
No 72
>3kr4_A M17 leucyl aminopeptidase; protease, hydrolase; HET: BES 1PE; 2.00A {Plasmodium falciparum} PDB: 3kqz_A* 3kqx_A* 3kr5_A* 3t8w_A*
Probab=65.01 E-value=45 Score=28.86 Aligned_cols=175 Identities=15% Similarity=0.052 Sum_probs=95.9
Q ss_pred HHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCceeec-------CCCceEEEEecCC-CCc---------------
Q 045912 22 NWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITYSCP-------LVKTGIVAKIGSG-SHP--------------- 78 (218)
Q Consensus 22 ~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~~~~-------~~~~~via~~~~~-~~~--------------- 78 (218)
.+-+.+.|+|++.|.--..=...++...+..+++|++++.. .+-.++++.=.+. ..|
T Consensus 205 a~~v~laRdLvn~P~N~ltP~~lA~~a~~la~~~g~~v~Vl~~~~l~~~gmg~~laVg~GS~~pPrli~l~y~g~~~~~~ 284 (528)
T 3kr4_A 205 YFGTYYASQLIAAPSNYCNPVSLSNAAVELAQKLNLEYKILGVKELEELKMGAYLSVGKGSMYPNKFIHLTYKSKGDVKK 284 (528)
T ss_dssp HHHHHHHHHHHHSCTTTSCHHHHHHHHHHHHHHHTCEEEEECHHHHHHTTCHHHHHHGGGCSSCCEEEEEEEECSSCCCE
T ss_pred HHHHHHHHHHhhCCccccCHHHHHHHHHHHHHHcCCeEEEeeHHHHHhcCCCeEEeeccCCCCCCEEEEEEEcCCCCCCC
Confidence 35688999999999755555666778888888899988652 1222233322111 123
Q ss_pred EEEEEeeCCCCCccccCCCCccccCCCc-c---cc---cCC--c-HHHHHHHHHHHHHHhhccc-CC-------CCCccC
Q 045912 79 FIALRADMDALPLQELVNWEHKSKIDGK-M---HA---CGH--D-APTTMLLGEAKLLHRRKDQ-LN-------AADVIS 140 (218)
Q Consensus 79 ~i~~~~h~D~vp~~~~~~~pf~~~~~g~-~---~~---~G~--d-~~~a~ll~aa~~L~~~~~~-~~-------~~NvIP 140 (218)
+|+|.|= +.-|.+ .|. + .| .+| | +|.|+++++++++.+.+.. .. .-|.|.
T Consensus 285 ~iaLVGK----------GITFDs--GG~slKp~~g~~M~~MK~DM~GAAaVlg~~~aia~l~~~~vnv~~vi~~~ENm~s 352 (528)
T 3kr4_A 285 KIALVGK----------GITFDS--GGYNLKAAPGSMIDLMKFDMSGCAAVLGCAYCVGTLKPENVEIHFLSAVCENMVS 352 (528)
T ss_dssp EEEEEEE----------EEEEEC--CTTSCSCSTTCCGGGGGGGGHHHHHHHHHHHHHHHHCCSSEEEEEEEEEEEECCS
T ss_pred cEEEecC----------ceEeec--CCcccCCCCCcCHHHhhcCcchHHHHHHHHHHHHhcCCCCceEEEEEEeeccCCC
Confidence 3333332 111221 110 0 11 123 3 8899999999999887631 11 334443
Q ss_pred CeEE-----------EEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe---eecc----cCCCCc-ccCCHHHH
Q 045912 141 PRAE-----------FGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF---QVEE----FPLIPA-ALDNDSLY 201 (218)
Q Consensus 141 d~a~-----------~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~---~~~~----~~~~p~-~~~d~~l~ 201 (218)
+.+. .++++...+.|-+--+-+.+-.. +.++.+.-|+. +|.+ -..+.. +.||+.+.
T Consensus 353 g~A~rPgDVit~~~GkTVEV~NTDAEGRLvLADaL~yA-----~~~~p~~iID~ATLTGA~~vALG~~~agv~sn~d~l~ 427 (528)
T 3kr4_A 353 KNSYRPGDIITASNGKTIEVGNTDAEGRLTLADALVYA-----EKLGVDYIVDIATLTGAMLYSLGTSYAGVFGNNEELI 427 (528)
T ss_dssp TTSCCTTCEEECTTSCEEECSCTTCCHHHHHHHHHHHH-----HHTCCSEEEEEECCCTTHHHHTTTTCEEEEESCHHHH
T ss_pred CCCCCCCCEEEeCCCcEEEEecCCchhhhhhHHHHHHH-----HhhCCCEEEEeecchHHHHHHhCCCceEEEeCCHHHH
Confidence 3332 34666666666655555554432 23555555554 1100 122333 46789999
Q ss_pred HHHHHHHHhhcCC
Q 045912 202 LLVERVGKSLLGP 214 (218)
Q Consensus 202 ~~l~~~~~~~~G~ 214 (218)
+.+.++.+. .|+
T Consensus 428 ~~l~~Ag~~-~ge 439 (528)
T 3kr4_A 428 NKILQSSKT-SNE 439 (528)
T ss_dssp HHHHHHHHH-HTC
T ss_pred HHHHHHHHH-cCC
Confidence 999888765 354
No 73
>2ek8_A Aminopeptidase; metalloproteinase, hydrolase; 1.80A {Aneurinibacillus SP} PDB: 2ek9_A*
Probab=57.99 E-value=18 Score=30.18 Aligned_cols=40 Identities=10% Similarity=0.137 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHhCCCCCC--ChHHHHHHHHHHHHhcCCceee
Q 045912 22 NWLISIRRQIHENPELRF--EVHNTNALIRSELDKLGITYSC 61 (218)
Q Consensus 22 ~~~~~~~~~L~~~pe~~~--~E~~~a~~i~~~L~~~G~~~~~ 61 (218)
+.+.+.++.|-..|=+++ .+.++++||.+.|+++|+++..
T Consensus 16 ~~~~~~l~~Ls~~~R~~Gs~g~~~a~~yi~~~~~~~Gl~~~~ 57 (421)
T 2ek8_A 16 ENMYNTIQFLSQAPRVAGSPEELKAVRYIEQQFKSYGYHVEV 57 (421)
T ss_dssp HHHHHHHHHHTTSCCCTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHCCCceEE
Confidence 356677777777665555 4689999999999999997654
No 74
>3kz5_E Protein SOPB; partition, segregation, F plasmid, DNA-binding protein, DNA- DNA binding protein; 1.58A {Escherichia coli}
Probab=56.94 E-value=13 Score=21.16 Aligned_cols=27 Identities=11% Similarity=0.154 Sum_probs=21.1
Q ss_pred CeEEEEEeEecCChHHHHHHHHHHHHH
Q 045912 141 PRAEFGGTLRSLTTEGMYRLQKRLHNV 167 (218)
Q Consensus 141 d~a~~~~diR~~~~e~~~~l~~~i~~~ 167 (218)
|.+.|.+|.+..|.+..++++..+++.
T Consensus 21 d~Vsf~Ld~~~iP~~~IeKIE~lL~e~ 47 (52)
T 3kz5_E 21 DKMVLNLDRSRVPTECIEKIEAILKEL 47 (52)
T ss_dssp TEEEEEEETTTSCHHHHHHHHHHHHHH
T ss_pred CeEEEEeccccCCHHHHHHHHHHHHHH
Confidence 678999999999988877766666554
No 75
>2jvf_A De novo protein M7; tetrapeptide fragment-based protein design, artificial fold; NMR {Unidentified} SCOP: k.41.1.1
Probab=46.54 E-value=48 Score=20.27 Aligned_cols=30 Identities=17% Similarity=0.176 Sum_probs=24.5
Q ss_pred CeEEEEEeEecCChHHHHHHHHHHHHHHHH
Q 045912 141 PRAEFGGTLRSLTTEGMYRLQKRLHNVVKQ 170 (218)
Q Consensus 141 d~a~~~~diR~~~~e~~~~l~~~i~~~~~~ 170 (218)
|--++.+|+|...+..++...++++..+..
T Consensus 15 dgqeieidirvstgkeleralqelekalar 44 (96)
T 2jvf_A 15 DGQEIEIDIRVSTGKELERALQELEKALAR 44 (96)
T ss_dssp TTEEEEEEEECCSSSHHHHHHHHHHHHHHH
T ss_pred CCeEEEEEEEEcccHHHHHHHHHHHHHHHh
Confidence 456899999999999998888888776654
No 76
>3vat_A Dnpep, aspartyl aminopeptidase; alpha-beta-alpha sandwich, binuclea center, M18 peptidase, MH CLAN, tetrahedral aminopeptidase, hydrolase; 2.10A {Bos taurus} PDB: 3var_A 3l6s_A* 4dyo_A*
Probab=42.50 E-value=99 Score=26.58 Aligned_cols=67 Identities=18% Similarity=0.107 Sum_probs=41.0
Q ss_pred HHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCce-ee------cCC--------CceEEEE-ecCC-C--CcEEEEE
Q 045912 23 WLISIRRQIHENPELRFEVHNTNALIRSELDKLGITY-SC------PLV--------KTGIVAK-IGSG-S--HPFIALR 83 (218)
Q Consensus 23 ~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~-~~------~~~--------~~~via~-~~~~-~--~~~i~~~ 83 (218)
.+-++.++|.+.=.-+.-++.+.+.+.+.|++.||.- .. ..+ +..+||- +++. + ...-++-
T Consensus 34 ~~~~~a~~~~~Fl~~spT~~hav~~~~~~L~~aGF~~L~e~~~w~l~~ggkyyv~rn~ssliAf~vg~~~~~~~G~~ivg 113 (496)
T 3vat_A 34 AVQAAARELLKFVNRSPSPFHAVAECRSRLLQAGFHELKETESWDIKPESKYFLTRNSSTIIAFAVGGQYVPGNGFSLIG 113 (496)
T ss_dssp HHHHHHHHHHHHHHTCSSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTCCEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHCcCeEccccCCcccCCCCEEEEECCCcEEEEEEeCCCCCCCCCeEEEE
Confidence 3333444444443446779999999999999999963 11 111 2356665 3432 1 2345788
Q ss_pred eeCCCC
Q 045912 84 ADMDAL 89 (218)
Q Consensus 84 ~h~D~v 89 (218)
||.|.-
T Consensus 114 aHtDSP 119 (496)
T 3vat_A 114 AHTDSP 119 (496)
T ss_dssp EECCCC
T ss_pred EeccCC
Confidence 999975
No 77
>3kas_A Transferrin receptor protein 1; transferrin receptor 1, arenavirus, cell MEMB disulfide bond, endocytosis, HOST-virus inter receptor, secreted, transmembrane; HET: NAG FUC BMA MAN; 2.40A {Homo sapiens} PDB: 1de4_C* 3s9l_A* 3s9m_A* 3s9n_A* 1cx8_A* 1suv_A 2nsu_A
Probab=42.37 E-value=22 Score=31.74 Aligned_cols=47 Identities=11% Similarity=0.179 Sum_probs=32.2
Q ss_pred HHHHHHHHHHhHHHHHHHHHHHHhC---CCCC--CChHHHHHHHHHHHHhcCCc
Q 045912 10 ADQILIETERDKNWLISIRRQIHEN---PELR--FEVHNTNALIRSELDKLGIT 58 (218)
Q Consensus 10 ~~~i~~~i~~~~~~~~~~~~~L~~~---pe~~--~~E~~~a~~i~~~L~~~G~~ 58 (218)
++.+.+.|+.. .+.+.++.|-+. |=.+ ..+.++++||.+.|+++|++
T Consensus 8 ~~~l~~~i~~~--~i~~~L~~Lssd~~~~R~aGT~g~~~aa~yI~~~f~~~Gl~ 59 (640)
T 3kas_A 8 KRKLSEKLDST--DFTSTIKLLNENSYVPREAGSQKDENLALYVENQFREFKLS 59 (640)
T ss_dssp HHHHHHHHHTC--CHHHHHHHTTSTTTSSCCTTSHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHHhCCHH--HHHHHHHHHhcccCCCCCCCCHHHHHHHHHHHHHHHHcCCc
Confidence 34455555543 466667777663 3333 35789999999999999997
No 78
>2kkm_A Translation machinery-associated protein 16; nucleus, structural genomics, PSI-2, protein structure initiative; NMR {Saccharomyces cerevisiae}
Probab=42.29 E-value=67 Score=22.56 Aligned_cols=57 Identities=16% Similarity=0.088 Sum_probs=34.9
Q ss_pred CCCCchHHHHHHHHHHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHh--cCCce
Q 045912 2 PYSLDEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDK--LGITY 59 (218)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~--~G~~~ 59 (218)
||++.+- ..-|..||..+.+++-++...=..---.+..|...-..+....++ -||++
T Consensus 44 ~~t~~e~-~~lI~~yl~R~d~ELeql~~~rR~gRp~s~Re~~L~~~~~~E~~ey~tG~~i 102 (144)
T 2kkm_A 44 IFDHAHT-REFIQSFIERDDTELDELKKKRRSNRPPSNRQVLLQQRRDQELKEFKAGFLC 102 (144)
T ss_dssp CCCHHHH-HHHHHHHHHHHHHHHHHHHHHGGGTCCCTTHHHHHHHHHHHHHHHHHTTEEE
T ss_pred CCCHHHH-HHHHHHHHhcCcHHHHHHHHhhCCCCCCchHHHHHHHHHHHHHHHHccCccC
Confidence 3665554 677888999888888777764222212356665555555544433 28875
No 79
>4g29_A Secreted effector protein SSEI; cysteine protease superfamily, protein binding; 1.70A {Salmonella enterica subsp} PDB: 4g2b_A
Probab=42.16 E-value=77 Score=23.09 Aligned_cols=34 Identities=9% Similarity=0.131 Sum_probs=26.1
Q ss_pred HHHHHHHHhCCC-------CCCChHHHHHHHHHHHHhcCCc
Q 045912 25 ISIRRQIHENPE-------LRFEVHNTNALIRSELDKLGIT 58 (218)
Q Consensus 25 ~~~~~~L~~~pe-------~~~~E~~~a~~i~~~L~~~G~~ 58 (218)
.+.+-+|++.|+ +.++-...+.-|..+|++.|++
T Consensus 19 ~~yl~~l~~~p~~~k~I~~P~~~Ce~s~~~V~~~Lk~~gy~ 59 (186)
T 4g29_A 19 AAYLEELKQNPIINNKIMNPVGQCESLMTPVSNFMNEKGFD 59 (186)
T ss_dssp HHHHHHHHTSHHHHHHHHSCTTCHHHHHHHHHHHHHHTTCE
T ss_pred HHHHHHHhcCchHHhHhcChHHHHHHHHHHHHHHHHhCCCc
Confidence 344555666553 5678889999999999999997
No 80
>3mru_A Aminoacyl-histidine dipeptidase; metalloprotease, homodimer, hydrolase; 3.00A {Vibrio alginolyticus}
Probab=41.12 E-value=36 Score=28.95 Aligned_cols=67 Identities=12% Similarity=0.162 Sum_probs=53.0
Q ss_pred CCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEeeecccCCCCccc--CCHHHHHHHHHHHHhhcCCCC
Q 045912 140 SPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDFQVEEFPLIPAAL--DNDSLYLLVERVGKSLLGPEN 216 (218)
Q Consensus 140 Pd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~~~~~~~~~p~~~--~d~~l~~~l~~~~~~~~G~~~ 216 (218)
++++++.+++|+.+....+++.++++++++ ..|.++++.. .+||.. .|+++++.+.+++++++|.+.
T Consensus 359 ~~~~~~~~~~R~~~~~~~~~i~~~l~~~~~----~~g~~~~~~~------~~p~~~~~~d~~lv~~l~~a~~~~~G~~~ 427 (490)
T 3mru_A 359 ENKVTVLCLIRSLIDSGRSQVEGMLQSVAE----LAGAQIEFSG------AYPGWKPDADSEIMAIFRDMYEGIYGHKP 427 (490)
T ss_dssp TTEEEEEEEEEESSHHHHHHHHHHHHHHHH----HTTCEEEEEE------EECCBCCCTTCHHHHHHHHHHHTTSSSCC
T ss_pred CCEEEEEEEcCCCCchHHHHHHHHHHHHHH----HcCCeEEecC------CCCCCCCCCCCHHHHHHHHHHHHHHCCCC
Confidence 467899999999999999999999888765 3577766543 455543 467899999999999888753
No 81
>3lno_A Putative uncharacterized protein; alpha-beta fold, structural genomics, center for structural genomics of infectious diseases, csgid; 2.10A {Bacillus anthracis} SCOP: d.52.8.0
Probab=38.57 E-value=44 Score=22.04 Aligned_cols=31 Identities=13% Similarity=0.071 Sum_probs=23.6
Q ss_pred CeEEEEEeEecCChHHHHHHHHHHHHHH-HHH
Q 045912 141 PRAEFGGTLRSLTTEGMYRLQKRLHNVV-KQQ 171 (218)
Q Consensus 141 d~a~~~~diR~~~~e~~~~l~~~i~~~~-~~~ 171 (218)
+.+.+.+.+-+......+.+.+.+++.+ ..+
T Consensus 44 ~~V~V~ltlt~p~cp~~~~i~~~i~~al~~~l 75 (108)
T 3lno_A 44 NNAVITMTMTSIGCPMAGQIVSDVKKVLSTNV 75 (108)
T ss_dssp CCEEEEECCSCTTCTTHHHHHHHHHHHHHHHC
T ss_pred CeEEEEEEECCCCCcHHHHHHHHHHHHHHHhC
Confidence 5688888887777777788888888877 543
No 82
>2dof_A Transcription elongation regulator 1; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=37.74 E-value=18 Score=23.08 Aligned_cols=27 Identities=4% Similarity=0.103 Sum_probs=21.3
Q ss_pred HHhHHHHHHHHHHHHhCCCCCCChHHH
Q 045912 18 ERDKNWLISIRRQIHENPELRFEVHNT 44 (218)
Q Consensus 18 ~~~~~~~~~~~~~L~~~pe~~~~E~~~ 44 (218)
++.....-.|+-+||+.|.+||.|.+.
T Consensus 17 ~EA~~~F~aLL~DlIr~pd~sW~Eakr 43 (85)
T 2dof_A 17 EEAIQNFKALLSDMVRSSDVSWSDTRR 43 (85)
T ss_dssp HHHHHHHHHHHHHHTCCSSCCHHHHHH
T ss_pred HHHHHHHHHHHHHHhcCCCCCHHHHHH
Confidence 344556678889999999999999754
No 83
>4eme_A M18 aspartyl aminopeptidase; dnpep/M18/aminopeptidase, protease, hydrolase; 2.60A {Plasmodium falciparum 3D7}
Probab=37.70 E-value=1.7e+02 Score=25.68 Aligned_cols=52 Identities=12% Similarity=0.066 Sum_probs=34.7
Q ss_pred CCChHHHHHHHHHHHHhcCCce-e-ec-----CC--------CceEEEEe-cCC--CC-c-EEEEEeeCCCC
Q 045912 38 RFEVHNTNALIRSELDKLGITY-S-CP-----LV--------KTGIVAKI-GSG--SH-P-FIALRADMDAL 89 (218)
Q Consensus 38 ~~~E~~~a~~i~~~L~~~G~~~-~-~~-----~~--------~~~via~~-~~~--~~-~-~i~~~~h~D~v 89 (218)
+.-++.+.+.+.++|++.||.- . .. .+ +.+++|-. |.. .+ . .-++-||.|.-
T Consensus 20 spT~~HaV~~~~~~L~~aGF~~L~E~~~W~l~~Ggkyy~~rn~ssiiAf~vG~~~~~~~G~~~IvgAHtDSP 91 (571)
T 4eme_A 20 SGSNFLACKNLKERLENNGFINLSEGETWNLNKNEGYVLCKENRNICGFFVGKNFNIDTGSILISIGHIDSC 91 (571)
T ss_dssp CCSHHHHHHHHHHHHHHTTCEECCTTSCCCCCTTCEEEEEETTTEEEEEEECTTCCTTTCCEEEEEEECCCC
T ss_pred CCCHHHHHHHHHHHHHHCcCEEccccCCcccCCCCEEEEEcCCCEEEEEEeCCcCCCCCCcEEEEEEeccCC
Confidence 4568999999999999999963 1 11 11 23566643 433 11 3 56788999985
No 84
>2kl8_A OR15; structural genomics, PSI-2, protein structure initiative, de novo protein, ferrodoxin fold; NMR {Artificial gene}
Probab=36.82 E-value=68 Score=19.16 Aligned_cols=36 Identities=11% Similarity=0.147 Sum_probs=20.4
Q ss_pred EEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe
Q 045912 146 GGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF 183 (218)
Q Consensus 146 ~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~ 183 (218)
..|+|+.. .+++.+.+.+++++.+. .++..++.+..
T Consensus 2 emdirfrg-ddleafekalkemirqa-rkfagtvtytl 37 (85)
T 2kl8_A 2 EMDIRFRG-DDLEAFEKALKEMIRQA-RKFAGTVTYTL 37 (85)
T ss_dssp EEEEEEEC-SSHHHHHHHHHHHHHHH-TTTTCEEEEEE
T ss_pred ccceeecC-CcHHHHHHHHHHHHHHH-HhhcceEEEEe
Confidence 45666543 35667777777777654 34444555444
No 85
>4ds1_A Dynein light chain 1, cytoplasmic; dynein light chain fold, peptide binding, nucle structural protein-transport protein complex; 1.85A {Saccharomyces cerevisiae}
Probab=35.82 E-value=68 Score=20.82 Aligned_cols=34 Identities=15% Similarity=0.252 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhc-CC
Q 045912 21 KNWLISIRRQIHENPELRFEVHNTNALIRSELDKL-GI 57 (218)
Q Consensus 21 ~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~-G~ 57 (218)
+++++++.++..+--+ .|.++|++|.+.|.+. |-
T Consensus 26 q~~a~~~a~~al~~~~---~ek~iA~~IK~~fDkkyG~ 60 (97)
T 4ds1_A 26 KEDILTISKDALDKYQ---LERDIAGTVKKQLDVKYGN 60 (97)
T ss_dssp HHHHHHHHHHHHHHCS---SHHHHHHHHHHHHHHHHCS
T ss_pred HHHHHHHHHHHHHHcC---CHHHHHHHHHHHHhCccCC
Confidence 3444444444443322 6889999999999875 54
No 86
>3ut4_A CTHE_2751, putative uncharacterized protein; non PFAM singleton, helical fold, unknown function; 2.03A {Clostridium thermocellum} PDB: 3ut8_A 3ut7_A
Probab=35.25 E-value=1.1e+02 Score=21.21 Aligned_cols=52 Identities=10% Similarity=0.011 Sum_probs=39.5
Q ss_pred CCchHHHHHHHHHHH-----HhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhc
Q 045912 4 SLDEAFADQILIETE-----RDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKL 55 (218)
Q Consensus 4 ~~~~~~~~~i~~~i~-----~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~ 55 (218)
+-|+.|+-.++.++- .....+..-+..|...|+-+-.+.++.+.-.+.|++.
T Consensus 72 s~D~~W~ywil~~lv~~~~~~~~~~l~~eL~rl~~~pt~~E~~eev~e~A~~iL~~~ 128 (134)
T 3ut4_A 72 GNDIMWKYWVIKLMIPYLIYPNKQLVKSELERLSSLEIINEDIREIVNLSKDYLHFY 128 (134)
T ss_dssp SSCHHHHHHHHHHHGGGCCHHHHHHHHHHHHHHHTCCCSSGGGHHHHHHHHHHHHHH
T ss_pred cCChHHHHHHHHHHHHcCCHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHH
Confidence 568889988887764 3455666667777788877778888888888888876
No 87
>3ak8_A DNA protection during starvation protein; DPS-like protein, dodecamer, iron-binding protein, metal BIN protein, oxidoreductase; HET: DNA; 1.25A {Salmonella enterica subsp} PDB: 3ak9_A* 1f33_A* 1f30_A* 1dps_A 1jts_A* 1jre_A* 1l8h_A* 1l8i_A* 4dyu_A*
Probab=34.90 E-value=1e+02 Score=21.94 Aligned_cols=49 Identities=14% Similarity=0.100 Sum_probs=32.8
Q ss_pred CCCCchHHHHHHHHHHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHh
Q 045912 2 PYSLDEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDK 54 (218)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~ 54 (218)
+|+.+......+.+.+-+....+++.+|+.+..-+ ...|++.+.++++.
T Consensus 106 e~~~~~~~~~eml~~~l~~~~~~i~~~r~~i~~a~----D~~T~dll~~il~~ 154 (167)
T 3ak8_A 106 SYPLDIHNVQDHLKELADRYAVVANDVRKAIGEAK----DEDTADIFTAASRD 154 (167)
T ss_dssp CCCSSCCBHHHHHHHHHHHHHHHHHHHHHHHHHCC----SHHHHHHHHHHHHH
T ss_pred CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhC----CHHHHHHHHHHHHH
Confidence 34443222345555555666778888888888766 78888888888765
No 88
>3kew_A DHHA1 domain protein; structural genomics, PSI-2, tRNA synthase, protein structure initiative; 2.00A {Clostridium perfringens}
Probab=34.47 E-value=98 Score=23.65 Aligned_cols=43 Identities=5% Similarity=-0.072 Sum_probs=32.7
Q ss_pred CCCccCCeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe
Q 045912 135 AADVISPRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF 183 (218)
Q Consensus 135 ~~NvIPd~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~ 183 (218)
++.+-|+.+.+.++ ..++.+.++++++.+.+++.+ +..++..+
T Consensus 118 G~~v~~~~~r~Df~-~~lt~e~l~~IE~~vn~~I~~-----~~pV~~~~ 160 (241)
T 3kew_A 118 GFHLGKEISTVDIV-GFLDEKTIREAEKEANRLIFE-----NLEVKSYA 160 (241)
T ss_dssp EEEECSSCEEEEEE-SCCCHHHHHHHHHHHHHHHHH-----TCBEEEEC
T ss_pred eccccCCeEEEEEC-CCCCHHHHHHHHHHHHHHHHc-----CCCEEEEE
Confidence 45556788888888 888888998888888888753 55666654
No 89
>3twe_A Alpha4H; unknown function; HET: PGE; 1.36A {Synthetic} PDB: 3twf_A* 4g4m_A*
Probab=30.83 E-value=47 Score=15.54 Aligned_cols=22 Identities=23% Similarity=0.400 Sum_probs=15.9
Q ss_pred HHHHHHHHHhHHHHHHHHHHHH
Q 045912 11 DQILIETERDKNWLISIRRQIH 32 (218)
Q Consensus 11 ~~i~~~i~~~~~~~~~~~~~L~ 32 (218)
.++...++..++.+..+++.|.
T Consensus 4 delykeledlqerlrklrkklr 25 (27)
T 3twe_A 4 DELYKELEDLQERLRKLRKKLR 25 (27)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhc
Confidence 3566677778888888887764
No 90
>1kaf_A Transcription regulatory protein MOTA; escherichia coli, X-RAY crystallography, protein-DNA interactions, structural genomics; 1.60A {Enterobacteria phage T4} SCOP: d.199.1.1
Probab=30.12 E-value=59 Score=21.61 Aligned_cols=32 Identities=19% Similarity=0.277 Sum_probs=26.4
Q ss_pred HHHHHHHHHHHHhcCCceee-cCCCceEEEEec
Q 045912 42 HNTNALIRSELDKLGITYSC-PLVKTGIVAKIG 73 (218)
Q Consensus 42 ~~~a~~i~~~L~~~G~~~~~-~~~~~~via~~~ 73 (218)
...++++.++|+..||++.. ...|.|+..++.
T Consensus 8 e~~~d~~~e~l~~~~ie~K~~~~~RSN~~i~f~ 40 (108)
T 1kaf_A 8 EEDKDLMLKLLDKNGFVLKKVEIYRSNYLAILE 40 (108)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHhhhcCceeeeeEeeccceEEeee
Confidence 46789999999999999764 446899999984
No 91
>3v4g_A Arginine repressor; vibrio vulnificus CMCP6, virulence, type secretion system, center for structural genomics of infecti diseases, csgid; 1.60A {Vibrio vulnificus} PDB: 1aoy_A
Probab=29.92 E-value=25 Score=25.84 Aligned_cols=35 Identities=11% Similarity=0.164 Sum_probs=24.7
Q ss_pred hHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhcCCce
Q 045912 20 DKNWLISIRRQIHENPELRFEVHNTNALIRSELDKLGITY 59 (218)
Q Consensus 20 ~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~~~ 59 (218)
.++...+..++|++.-+++- ++-|.+.|++.||++
T Consensus 30 k~~~r~~~I~eiI~~~~I~T-----QeEL~~~L~~~Gi~v 64 (180)
T 3v4g_A 30 KQDNLVRAFKALLKEERFGS-----QGEIVEALKQEGFEN 64 (180)
T ss_dssp CHHHHHHHHHHHHHHTCCCS-----HHHHHHHHHHTTCTT
T ss_pred cHHHHHHHHHHHHhhCCcCC-----HHHHHHHHHHCCCcc
Confidence 45566777778877755554 455778888888887
No 92
>3tuf_A Stage III sporulation protein AH; intercellular signalling, intercellular channel, sporulation engulfment and signalling, intercellular space; 2.26A {Bacillus subtilis} PDB: 3uz0_A
Probab=29.73 E-value=1.7e+02 Score=21.70 Aligned_cols=50 Identities=6% Similarity=0.034 Sum_probs=34.2
Q ss_pred HHHHHHHHHHHhHHHHHHHHHHHHhCCCCCCChHHH--------------HHHHHHHHHhcCCc
Q 045912 9 FADQILIETERDKNWLISIRRQIHENPELRFEVHNT--------------NALIRSELDKLGIT 58 (218)
Q Consensus 9 ~~~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E~~~--------------a~~i~~~L~~~G~~ 58 (218)
+.....-..++.+.+.++.|+.++..+..+..++.- -..|...|+..||.
T Consensus 84 yFae~RL~REq~Rsk~~E~L~eII~n~n~S~eeK~eA~~ql~eLt~~~ekE~~IE~LLKAKGF~ 147 (197)
T 3tuf_A 84 LFTTYRLDLEDARSKEREELNAIVSSDDATAKEKSEAYDKMTALSEVEGTEKQLETLIKTQGYE 147 (197)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHTCTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 344444555677888999999999999987655322 34455666667775
No 93
>2k9l_A RNA polymerase sigma factor RPON; protein, transcription; NMR {Aquifex aeolicus}
Probab=28.60 E-value=28 Score=21.48 Aligned_cols=29 Identities=17% Similarity=0.221 Sum_probs=23.0
Q ss_pred HHHHHHhCCCCCCChHHHHHHHHHHHHhcCC
Q 045912 27 IRRQIHENPELRFEVHNTNALIRSELDKLGI 57 (218)
Q Consensus 27 ~~~~L~~~pe~~~~E~~~a~~i~~~L~~~G~ 57 (218)
+..+|. ..++..++.++.+|.+-|.+.|+
T Consensus 18 L~~Ql~--~~~~~~~~~Ia~~iI~~LD~~GY 46 (76)
T 2k9l_A 18 LQQNIK--LELEGKEQELALELLNYLNEKGF 46 (76)
T ss_dssp HHHHHH--HHCCTTSHHHHHHHHHHCTTSST
T ss_pred HHHHHc--ccCCHHHHHHHHHHHHhcCCCCC
Confidence 444554 24678899999999999999997
No 94
>1yo3_A Dynein light chain 1; structural genomics consortium, microtub malaria, SGC, transport protein; 1.65A {Plasmodium falciparum} PDB: 1f3c_A 1f95_A 1f96_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3dvt_A 2pg1_A 3p8m_A 1pwj_A 2xqq_A 3brl_A 1re6_A 1cmi_A 3dvh_A 3dvp_A ...
Probab=28.59 E-value=1e+02 Score=20.14 Aligned_cols=18 Identities=22% Similarity=0.257 Sum_probs=15.1
Q ss_pred ChHHHHHHHHHHHHhc-CC
Q 045912 40 EVHNTNALIRSELDKL-GI 57 (218)
Q Consensus 40 ~E~~~a~~i~~~L~~~-G~ 57 (218)
.|.++|++|++.|.+. |-
T Consensus 47 ~ekdiA~~IK~~fDkkyG~ 65 (102)
T 1yo3_A 47 VEKDIAAHIKKEFDRKYDP 65 (102)
T ss_dssp SHHHHHHHHHHHHHHHHCS
T ss_pred cHHHHHHHHHHHHhhhcCC
Confidence 5889999999999874 54
No 95
>3rjs_A Dynein light chain motor protein; parasite, LC8, DLC8, TGDLC8, LIG PIN, DLC1, dynll1, transport protein; 1.50A {Toxoplasma gondii} PDB: 1pwj_A 2xqq_A 1re6_A 3p8m_A 3dvt_A 2pg1_A 1rhw_A 2p1k_A 2p2t_A 3bri_A 3e2b_A 3fm7_E 3glw_A 3brl_A 3dvh_A 3dvp_A 1pwk_A 1f3c_A 1f95_A 1f96_A ...
Probab=28.56 E-value=1.1e+02 Score=19.39 Aligned_cols=16 Identities=25% Similarity=0.405 Sum_probs=13.7
Q ss_pred ChHHHHHHHHHHHHhc
Q 045912 40 EVHNTNALIRSELDKL 55 (218)
Q Consensus 40 ~E~~~a~~i~~~L~~~ 55 (218)
.|.++|++|.+.|.+.
T Consensus 34 ~ek~iA~~IK~~fD~k 49 (89)
T 3rjs_A 34 IEKDIAAFIKKEFDRK 49 (89)
T ss_dssp SHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHhcc
Confidence 4788999999999874
No 96
>3kdg_A DNA mismatch repair protein MUTL; endonuclease, DNA damage, DNA repair, hydrolase; HET: DNA; 2.00A {Bacillus subtilis} PDB: 3gab_A* 3kdk_A*
Probab=26.53 E-value=60 Score=23.91 Aligned_cols=26 Identities=12% Similarity=0.116 Sum_probs=22.4
Q ss_pred CCCCChHHHHHHHHHHHHhcCCceee
Q 045912 36 ELRFEVHNTNALIRSELDKLGITYSC 61 (218)
Q Consensus 36 e~~~~E~~~a~~i~~~L~~~G~~~~~ 61 (218)
+++..|.....-..+.|+++||+++.
T Consensus 66 ~ls~~e~~~l~~~~~~l~~~Gf~~e~ 91 (197)
T 3kdg_A 66 HYSTNEALIIEQHKQELESVGVFLES 91 (197)
T ss_dssp ECCTTHHHHHHHTHHHHHHTTCCCEE
T ss_pred ecCHHHHHHHHHHHHHHHhCCCEEEE
Confidence 35778999999999999999999764
No 97
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=26.43 E-value=49 Score=22.25 Aligned_cols=27 Identities=11% Similarity=-0.057 Sum_probs=22.9
Q ss_pred CCCCCChHHHHHHHHHHHHhcCCceee
Q 045912 35 PELRFEVHNTNALIRSELDKLGITYSC 61 (218)
Q Consensus 35 pe~~~~E~~~a~~i~~~L~~~G~~~~~ 61 (218)
-|.+++-++.|+.|++.|++.|++++.
T Consensus 6 ~S~tGnT~~iA~~ia~~l~~~g~~v~~ 32 (138)
T 5nul_A 6 WSGTGNTEKMAELIAKGIIESGKDVNT 32 (138)
T ss_dssp ECSSSHHHHHHHHHHHHHHHTTCCCEE
T ss_pred ECCCchHHHHHHHHHHHHHHCCCeEEE
Confidence 356788899999999999999988654
No 98
>3lpe_A Putative transcription antitermination protein NU; transcription regulation, SPT4, SPT5, NUSG, archaea, evoluti directed RNA polymerase; 1.90A {Methanocaldococcus jannaschii} PDB: 3ewg_A
Probab=26.16 E-value=72 Score=20.34 Aligned_cols=23 Identities=17% Similarity=0.154 Sum_probs=20.2
Q ss_pred CCCChHHHHHHHHHHHHhcCCce
Q 045912 37 LRFEVHNTNALIRSELDKLGITY 59 (218)
Q Consensus 37 ~~~~E~~~a~~i~~~L~~~G~~~ 59 (218)
.+++|.++++.|.+..+..|+++
T Consensus 18 ~sG~E~~V~~~L~~~~~~~~l~i 40 (92)
T 3lpe_A 18 MVGQEKNIAGLMASRAEKEQLDV 40 (92)
T ss_dssp CTTCHHHHHHHHHHHHHHTTCCE
T ss_pred ECChHHHHHHHHHHHHHhcCCcE
Confidence 37899999999999999988874
No 99
>1yz7_A Probable translation initiation factor 2 alpha subunit; helical domain, alpha-beta domain; 2.26A {Pyrococcus abyssi}
Probab=25.79 E-value=2e+02 Score=21.12 Aligned_cols=47 Identities=9% Similarity=0.090 Sum_probs=31.0
Q ss_pred CccCCeEEEE--EeEecCChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe
Q 045912 137 DVISPRAEFG--GTLRSLTTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF 183 (218)
Q Consensus 137 NvIPd~a~~~--~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~ 183 (218)
|+-|..+.++ +++.++..+-.+.+++.|+...+......++++++.+
T Consensus 83 ~l~~q~vkIra~ieltc~~~dGIe~IK~AL~~a~~~~~~~~~~~ikI~l 131 (188)
T 1yz7_A 83 YVEVPTVTIDAEFEITVPKPNGVEIIKEALIRARDRANKEKDVEVKFTY 131 (188)
T ss_dssp HSCCCCEEEEEEEEEECCSTTHHHHHHHHHHHHHHHHHTSTTCEEEEEE
T ss_pred hCCCCceEEEEEEEEEeCCCchHHHHHHHHHHHHhcccCCCCCcEEEEE
Confidence 5666666655 4557889999999998888653311112356677776
No 100
>3fay_A P195, RAS GTPase-activating-like protein iqgap1; all alpha, calmodulin-binding, cell membrane, membrane, phosphoprotein, membrane protein; 2.20A {Homo sapiens}
Probab=24.92 E-value=75 Score=26.19 Aligned_cols=36 Identities=17% Similarity=0.052 Sum_probs=28.6
Q ss_pred CCCCchHHHHHHHHHHHHhHHHHHHHHHHHHhCCCC
Q 045912 2 PYSLDEAFADQILIETERDKNWLISIRRQIHENPEL 37 (218)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~~~~~~L~~~pe~ 37 (218)
+|...++|+.-+.+++++..+.+.+++.++...|++
T Consensus 282 ~f~~ke~~m~~lN~fi~~~~~~~~~fl~~i~~v~~~ 317 (387)
T 3fay_A 282 MFLGDNAHLSIINEYLSQSYQKFRRFFQTACDVPEL 317 (387)
T ss_dssp CCCSSCGGGHHHHHHHHHHHHHHHHHHHHHHCCCCH
T ss_pred CCCCCCchHHHHHHHHHHHHHHHHHHHHHHhCCCCH
Confidence 455667888888888888888888888888888763
No 101
>1x9z_A DNA mismatch repair protein MUTL; alpha-beta fold, dimer, replication, signaling protein; HET: DNA MSE; 2.10A {Escherichia coli} SCOP: d.292.1.1
Probab=24.59 E-value=55 Score=23.88 Aligned_cols=26 Identities=23% Similarity=0.323 Sum_probs=21.2
Q ss_pred CCCChHHHHHHHHHHHHhcCCceeec
Q 045912 37 LRFEVHNTNALIRSELDKLGITYSCP 62 (218)
Q Consensus 37 ~~~~E~~~a~~i~~~L~~~G~~~~~~ 62 (218)
++..|..+..-..+.|+++||+++..
T Consensus 65 ls~~e~~~l~~~~~~l~~~Gf~~e~~ 90 (188)
T 1x9z_A 65 VSAEEKSALEKAQSALAELGIDFQSD 90 (188)
T ss_dssp CCHHHHHHHHHHHHHHHHTTCEEEEC
T ss_pred eCHHHHHHHHHHHHHHHhCCcEEEEc
Confidence 45568888888889999999998753
No 102
>3t98_A Nuclear pore complex protein NUP54; NUP62 complex, nuclear import, coiled-coil, HE hairpin, FG-repeat, NPC, nuclear tranport, TRA channel, karyopherin; 2.50A {Rattus norvegicus}
Probab=24.35 E-value=1.1e+02 Score=17.45 Aligned_cols=24 Identities=17% Similarity=0.252 Sum_probs=18.9
Q ss_pred CCCCchHHHHHHHHHHHHhHHHHH
Q 045912 2 PYSLDEAFADQILIETERDKNWLI 25 (218)
Q Consensus 2 ~~~~~~~~~~~i~~~i~~~~~~~~ 25 (218)
-|.+|+....+|.+.+...++-+-
T Consensus 12 ~y~lD~~~~~eik~~L~~QQ~g~~ 35 (51)
T 3t98_A 12 KYYIDADLLREIKQHLKQQQEGLS 35 (51)
T ss_dssp -CCCCHHHHHHHHHHHHHHHHHHH
T ss_pred hhccCHHHHHHHHHHHHHHHHHHH
Confidence 389999988999999987776543
No 103
>1ejp_A Syndecan-4; symmetric-parallel-interwinded dimer, signaling protein; NMR {Synthetic} SCOP: j.80.1.1 PDB: 1ejq_A
Probab=23.92 E-value=22 Score=17.42 Aligned_cols=8 Identities=38% Similarity=0.841 Sum_probs=5.1
Q ss_pred CCCCCchH
Q 045912 1 GPYSLDEA 8 (218)
Q Consensus 1 ~~~~~~~~ 8 (218)
|.|++||+
T Consensus 8 GSY~Lde~ 15 (28)
T 1ejp_A 8 GSYDLGKK 15 (28)
T ss_dssp CCCCCCSC
T ss_pred cccccCCC
Confidence 56777664
No 104
>1qgp_A Protein (double stranded RNA adenosine deaminase); Z-alpha-Z-DNA binding domain, RNA-editing, Z-DNA recognition, ADAR1, helix- turn-helix; NMR {Homo sapiens} SCOP: a.4.5.19
Probab=22.46 E-value=1.4e+02 Score=18.14 Aligned_cols=16 Identities=19% Similarity=0.096 Sum_probs=12.1
Q ss_pred HHHHHHHHHHHHhcCC
Q 045912 42 HNTNALIRSELDKLGI 57 (218)
Q Consensus 42 ~~~a~~i~~~L~~~G~ 57 (218)
..+.......|++.|+
T Consensus 45 ~~tV~~~L~~L~~~G~ 60 (77)
T 1qgp_A 45 KKEINRVLYSLAKKGK 60 (77)
T ss_dssp HHHHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHCCC
Confidence 5667777778888887
No 105
>3ncv_A DNA mismatch repair protein MUTL; endonuclease, dimer, hydrolase; HET: DNA; 2.40A {Neisseria gonorrhoeae}
Probab=22.42 E-value=61 Score=24.47 Aligned_cols=26 Identities=19% Similarity=0.064 Sum_probs=21.8
Q ss_pred CCCCChHHHHHHHHHHHHhcCCceee
Q 045912 36 ELRFEVHNTNALIRSELDKLGITYSC 61 (218)
Q Consensus 36 e~~~~E~~~a~~i~~~L~~~G~~~~~ 61 (218)
+++..|.....-..+.|+++||+++.
T Consensus 88 ~Ls~~e~~~l~~~~~~L~~lGf~ie~ 113 (220)
T 3ncv_A 88 AASHEECAALADHAETLAGFGLELSD 113 (220)
T ss_dssp ECCHHHHHHHHHHHHHHHHTTCEEEC
T ss_pred EcCHHHHHHHHHHHHHHHhCCCEEEE
Confidence 35667888888999999999999875
No 106
>1xw8_A UPF0271 protein YBGL; NESG, northeast structural genomics consortium, structural genomics, protein structure initiative, PSI, X-RAY; 2.00A {Escherichia coli} SCOP: c.6.2.5
Probab=21.99 E-value=2.8e+02 Score=21.45 Aligned_cols=99 Identities=13% Similarity=0.067 Sum_probs=51.3
Q ss_pred cccC-CcHHHHHHHHHHHHHHhhcccCCCCCccCCeEEEEEeEecC---ChHHHHHHHHHHHHHHHHHHHHhCCeEEEEe
Q 045912 108 HACG-HDAPTTMLLGEAKLLHRRKDQLNAADVISPRAEFGGTLRSL---TTEGMYRLQKRLHNVVKQQAAVHRCNAYVDF 183 (218)
Q Consensus 108 ~~~G-~d~~~a~ll~aa~~L~~~~~~~~~~NvIPd~a~~~~diR~~---~~e~~~~l~~~i~~~~~~~a~~~g~~~~i~~ 183 (218)
-+|| |=|--..|.-+.+..++.+..+.+.=-.||..-|- .|.. +.|....+.-+|-. ++.+++..|.++..--
T Consensus 28 IACGfHAGDp~~M~~Tv~lA~~~gV~IGAHPgypDl~GFG--RR~m~~s~~el~~~v~YQiGA-L~a~a~~~G~~l~hVK 104 (252)
T 1xw8_A 28 IACGFHAGDAQIMQACVREAIKNGVAIGAHPSFPDRENFG--RSAMQLPPETVYAQTLYQIGA-LATIARAQGGVMRHVK 104 (252)
T ss_dssp EECSSSSCCHHHHHHHHHHHHHHTCEEEEECCCC---------CCCCCCHHHHHHHHHHHHHH-HHHHHHHTTCCEEEEC
T ss_pred HhhcccCCCHHHHHHHHHHHHHcCCeeecCCCCCcccCCC--CCCCCCCHHHHHHHHHHHHHH-HHHHHHHcCCEeEEeC
Confidence 4677 43334445556666666554333333456665544 4433 34444445555443 4667888888875432
Q ss_pred eecccCCCCcccCCHHHHHHHHHHHHhh
Q 045912 184 QVEEFPLIPAALDNDSLYLLVERVGKSL 211 (218)
Q Consensus 184 ~~~~~~~~p~~~~d~~l~~~l~~~~~~~ 211 (218)
.. -.-|.-...|+++.+.+.+++..+
T Consensus 105 PH--GALYN~~a~d~~~A~av~~av~~~ 130 (252)
T 1xw8_A 105 PH--GMLYNQAAKEAQLADAIARAVYAC 130 (252)
T ss_dssp CC--HHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred cC--HHHHHHHhhCHHHHHHHHHHHHHh
Confidence 00 011334556899999988888764
No 107
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=21.73 E-value=92 Score=21.75 Aligned_cols=28 Identities=14% Similarity=-0.066 Sum_probs=23.7
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCCceee
Q 045912 34 NPELRFEVHNTNALIRSELDKLGITYSC 61 (218)
Q Consensus 34 ~pe~~~~E~~~a~~i~~~L~~~G~~~~~ 61 (218)
+-|..++-.++|+.|++.|++.|++++.
T Consensus 7 Y~S~tGnT~~~A~~ia~~l~~~g~~v~~ 34 (161)
T 3hly_A 7 YLSDYGYSDRLSQAIGRGLVKTGVAVEM 34 (161)
T ss_dssp ECTTSTTHHHHHHHHHHHHHHTTCCEEE
T ss_pred EECCChHHHHHHHHHHHHHHhCCCeEEE
Confidence 3467889999999999999999988653
No 108
>2jx3_A Protein DEK; alpha helix, SAF/SAP motif, DNA binding, chromosomal rearrangement, DNA-binding, nucleus, phosphorylation, proto oncogene; NMR {Homo sapiens}
Probab=21.37 E-value=1.5e+02 Score=20.31 Aligned_cols=49 Identities=6% Similarity=-0.174 Sum_probs=26.3
Q ss_pred chHHHHHHHHHHHHhHHHHHHHHHHHHhCCCCCCChHHHHHHHHHHHHhc
Q 045912 6 DEAFADQILIETERDKNWLISIRRQIHENPELRFEVHNTNALIRSELDKL 55 (218)
Q Consensus 6 ~~~~~~~i~~~i~~~~~~~~~~~~~L~~~pe~~~~E~~~a~~i~~~L~~~ 55 (218)
|+.-.+...+.+++....-+.-+-++-.+|- ++.=.+.++.|.+||.+-
T Consensus 61 ~~~~~~k~~e~l~K~~~~~L~~~c~iL~l~~-~g~keelv~ril~FL~~P 109 (131)
T 2jx3_A 61 GSVQYKKKEEMLKKFRNAMLKSICEVLDLER-SGVNSELVKRILNFLMHP 109 (131)
T ss_dssp SSHHHHHHHHHHHHHHHHHHHHHHHTTTCCS-CSCHHHHHHHHHHTTTSC
T ss_pred cHHHHHHHHHHHHccCHHHHHHHHHHHCCCC-CCcHHHHHHHHHHHHhCc
Confidence 4433344566665554443333334445543 344457788888888653
No 109
>1uwd_A Hypothetical protein TM0487; similar to PAAD protein, alpha/beta fold,structural genomics joint center for structural genomics, JCSG; NMR {Thermotoga maritima} SCOP: d.52.8.2 PDB: 1wcj_A
Probab=21.31 E-value=69 Score=20.73 Aligned_cols=40 Identities=10% Similarity=0.008 Sum_probs=25.5
Q ss_pred CeEEEEEeEecCChHHHHHHHHHHHHHHHHHHHHhCC-eEEEEe
Q 045912 141 PRAEFGGTLRSLTTEGMYRLQKRLHNVVKQQAAVHRC-NAYVDF 183 (218)
Q Consensus 141 d~a~~~~diR~~~~e~~~~l~~~i~~~~~~~a~~~g~-~~~i~~ 183 (218)
+.+.+.+.+-+......+.+.+.+++.++.+ .|+ +++++.
T Consensus 42 ~~V~v~l~lt~~~cp~~~~l~~~i~~al~~l---~gv~~v~V~l 82 (103)
T 1uwd_A 42 NNVKVLMTMTTPMCPLAGMILSDAEEAIKKI---EGVNNVEVEL 82 (103)
T ss_dssp CEEEEEECCSSSCCSSHHHHHHHHHHHHHTS---SSCCEEEEEE
T ss_pred CEEEEEEEECCCCCcHHHHHHHHHHHHHHhC---CCcceEEEEE
Confidence 4677777776666667777888887776543 344 345544
No 110
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=21.20 E-value=94 Score=21.73 Aligned_cols=28 Identities=11% Similarity=-0.050 Sum_probs=23.8
Q ss_pred CCCCCCChHHHHHHHHHHHHhcCCceee
Q 045912 34 NPELRFEVHNTNALIRSELDKLGITYSC 61 (218)
Q Consensus 34 ~pe~~~~E~~~a~~i~~~L~~~G~~~~~ 61 (218)
+-|..++-.++|+.|++.|++.|++++.
T Consensus 11 Y~S~~GnT~~iA~~ia~~l~~~g~~v~~ 38 (159)
T 3fni_A 11 YVSEYGYSDRLAQAIINGITKTGVGVDV 38 (159)
T ss_dssp ECTTSTTHHHHHHHHHHHHHHTTCEEEE
T ss_pred EECCChHHHHHHHHHHHHHHHCCCeEEE
Confidence 3467889999999999999999988654
No 111
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=20.71 E-value=81 Score=20.85 Aligned_cols=27 Identities=7% Similarity=-0.076 Sum_probs=22.8
Q ss_pred CCCCCChHHHHHHHHHHHHhcCCceee
Q 045912 35 PELRFEVHNTNALIRSELDKLGITYSC 61 (218)
Q Consensus 35 pe~~~~E~~~a~~i~~~L~~~G~~~~~ 61 (218)
-|.+++-.+.++.|++.|++.|++++.
T Consensus 7 ~S~tGnT~~~a~~i~~~l~~~g~~v~~ 33 (137)
T 2fz5_A 7 WSGTGNTEAMANEIEAAVKAAGADVES 33 (137)
T ss_dssp CCSSSHHHHHHHHHHHHHHHTTCCEEE
T ss_pred ECCCChHHHHHHHHHHHHHhCCCeEEE
Confidence 466788899999999999999988754
No 112
>4gdk_C APG16-like 1, autophagy-related protein 16-1; protein-protein conjugate, protein-protein complex, ubiquiti protein, E3 ligase, ubiquitin-like fold; 2.70A {Homo sapiens} PDB: 4gdl_C
Probab=20.48 E-value=1.1e+02 Score=16.05 Aligned_cols=29 Identities=10% Similarity=-0.044 Sum_probs=20.4
Q ss_pred CchHHHHHHHHHHHHhHHHHHHHHHHHHh
Q 045912 5 LDEAFADQILIETERDKNWLISIRRQIHE 33 (218)
Q Consensus 5 ~~~~~~~~i~~~i~~~~~~~~~~~~~L~~ 33 (218)
-++.|+..|.+.+......-.+.+.+++.
T Consensus 2 ~~~~Wrr~I~~~Lr~RdR~q~~~F~diI~ 30 (36)
T 4gdk_C 2 HMPRWKRHISEQLRRRDRLQRQAFEEIIL 30 (36)
T ss_dssp -CCHHHHHHHHHHHHHHHHHTHHHHHHHH
T ss_pred cchHHHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 45678988888888766666666666654
No 113
>2qlc_A DNA repair protein RADC homolog; MCSG, structural genomics, PSI-2, structure initiative; HET: DNA; 2.30A {Chlorobium tepidum tls}
Probab=20.39 E-value=40 Score=23.12 Aligned_cols=30 Identities=17% Similarity=0.277 Sum_probs=23.9
Q ss_pred HHhCCC----CCCChHHHHHHHHHHHHhcCCcee
Q 045912 31 IHENPE----LRFEVHNTNALIRSELDKLGITYS 60 (218)
Q Consensus 31 L~~~pe----~~~~E~~~a~~i~~~L~~~G~~~~ 60 (218)
.|++|| ||......++.|.+-++-+|+++-
T Consensus 74 ~HNHPSG~~~PS~~D~~~T~~l~~a~~ll~I~ll 107 (126)
T 2qlc_A 74 VHNHPSGDVQPSNADKQVTSILKKAGDLLQIELL 107 (126)
T ss_dssp EEECSSSCCSCCHHHHHHHHHHHHHHHHHTCEEE
T ss_pred EecCCCCCCCCCHHHHHHHHHHHHHHHHCCCeEe
Confidence 367775 455678889999999999999864
No 114
>3pam_A Transmembrane protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; 2.31A {Bartonella henselae}
Probab=20.20 E-value=68 Score=24.21 Aligned_cols=21 Identities=24% Similarity=0.328 Sum_probs=18.3
Q ss_pred hHHHHHHHHHHHHhcCCceee
Q 045912 41 VHNTNALIRSELDKLGITYSC 61 (218)
Q Consensus 41 E~~~a~~i~~~L~~~G~~~~~ 61 (218)
..++++.|++.|++.||+++.
T Consensus 140 ~~~~a~~iq~~l~~iGI~v~i 160 (259)
T 3pam_A 140 EEKVALAFQSNLSRLGIHAEI 160 (259)
T ss_dssp HHHHHHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHHHHHHcCCEEEE
Confidence 467899999999999999875
Done!