BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045919
(277 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q6LA43|APRR2_ARATH Two-component response regulator-like APRR2 OS=Arabidopsis thaliana
GN=APRR2 PE=2 SV=2
Length = 535
Score = 74.7 bits (182), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 138/288 (47%), Gaps = 46/288 (15%)
Query: 10 DSLSFVRVLVKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQHSYIYK 69
+S F+ K+ +P I++S+ + + + GA FL+KP+S + LK +WQH ++K
Sbjct: 84 ESFKFLEA-AKDVLPTIMISTDHCITTTMKCIALGAVEFLQKPLSPEKLKNIWQH-VVHK 141
Query: 70 R----RSKIQLEDARKPEQEILLNRGNISQGKRINEGGDDVSRNIANASATDDLRYSINA 125
S + + + KP +E +++ ++ I E A +T L+
Sbjct: 142 AFNDGGSNVSI--SLKPVKESVVSMLHLETDMTIEEKDP--------APSTPQLK----- 186
Query: 126 DQNEKNNKQMEVDAQVHI-FDENSVKESQNACNMEQHLVMANDQIQEQGGLIKTKRSLDD 184
++++ ++ D Q +I F +V S NME H I E + T R LDD
Sbjct: 187 ----QDSRLLDGDCQENINFSMENVNSSTEKDNMEDH-----QDIGESKSVDTTNRKLDD 237
Query: 185 DRGGEKKRNLNSD-----------NENSNSFMV-PTEEKGKEMNENN---NGHVKKKRKP 229
D+ K+ +S+ +E ++S + E++ K +N+++ N K +
Sbjct: 238 DKVVVKEERGDSEKEEEGETGDLISEKTDSVDIHKKEDETKPINKSSGIKNVSGNKTSRK 297
Query: 230 RIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASHLQ 277
++ WT ELH KF++AV LG +A P IL+ M V LT+ VASHLQ
Sbjct: 298 KVDWTPELHKKFVQAVEQLGVDQAIPSRILELMKVGTLTRHNVASHLQ 345
>sp|Q940D0|ARR1_ARATH Two-component response regulator ARR1 OS=Arabidopsis thaliana
GN=ARR1 PE=1 SV=2
Length = 690
Score = 73.6 bits (179), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/69 (50%), Positives = 49/69 (71%)
Query: 209 EEKGKEMNENNNGHVKKKRKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLT 268
+E+G+E ++ + +KPR+VW+ ELH +F+ AV+ LG KA PK IL+ MNVPGLT
Sbjct: 218 DEEGEEQGDDKDEDASNLKKPRVVWSVELHQQFVAAVNQLGVEKAVPKKILELMNVPGLT 277
Query: 269 QRQVASHLQ 277
+ VASHLQ
Sbjct: 278 RENVASHLQ 286
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
Query: 1 MANVDISNIDSLSFV-RVLVKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLK 59
+++V + ++D + V ++ ++P+I+MS+ ++ + + GA +L KP+ + LK
Sbjct: 87 ISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRMEALK 146
Query: 60 YVWQHSYIYKRRSK 73
+WQH + KRRS+
Sbjct: 147 NIWQH-VVRKRRSE 159
>sp|Q9ZWJ9|ARR2_ARATH Two-component response regulator ARR2 OS=Arabidopsis thaliana
GN=ARR2 PE=1 SV=1
Length = 664
Score = 71.6 bits (174), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 51/149 (34%), Positives = 86/149 (57%), Gaps = 16/149 (10%)
Query: 133 KQMEVDAQVHIFDENSVKESQNACNMEQHLVMANDQIQEQGGLIKTKRSLDDDRGGEKKR 192
K + ++A +I+ ++ V++ +N N+ +H + I++ GG D DR + +
Sbjct: 129 KPVRIEALKNIW-QHVVRKKRNEWNVSEH---SGGSIEDTGG--------DRDRQQQHRE 176
Query: 193 NLNSDNENSNSFMVPTEEKGKEMNENNNGHVKKK----RKPRIVWTSELHLKFIEAVSSL 248
+ ++++ + N + K KE ++ G K+ +KPR+VW+ ELH +F+ AV+ L
Sbjct: 177 DADNNSSSVNEGNGRSSRKRKEEEVDDQGDDKEDSSSLKKPRVVWSVELHQQFVAAVNQL 236
Query: 249 GDIKARPKLILQKMNVPGLTQRQVASHLQ 277
G KA PK IL+ MNVPGLT+ VASHLQ
Sbjct: 237 GVDKAVPKKILEMMNVPGLTRENVASHLQ 265
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 1 MANVDISNIDSLSFV-RVLVKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLK 59
+++V + ++D + V ++ ++P+I+MS+ ++ + + GA +L KP+ + LK
Sbjct: 78 ISDVHMPDMDGFKLLEHVGLEMDLPVIMMSADDSKSVVLKGVTHGAVDYLIKPVRIEALK 137
Query: 60 YVWQHSYIYKR 70
+WQH KR
Sbjct: 138 NIWQHVVRKKR 148
>sp|Q9FGT7|ARR18_ARATH Two-component response regulator ARR18 OS=Arabidopsis thaliana
GN=ARR18 PE=2 SV=2
Length = 635
Score = 65.1 bits (157), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%), Gaps = 3/66 (4%)
Query: 212 GKEMNENNNGHVKKKRKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQ 271
G E + + +G ++KPR+VW+ ELH KF+ AV LG KA PK IL M++ GLT+
Sbjct: 181 GSEQDGDGSG---TRKKPRVVWSQELHQKFVSAVQQLGLDKAVPKKILDLMSIEGLTREN 237
Query: 272 VASHLQ 277
VASHLQ
Sbjct: 238 VASHLQ 243
Score = 46.6 bits (109), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 14/64 (21%), Positives = 39/64 (60%)
Query: 1 MANVDISNIDSLSFVRVLVKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKY 60
+++V++ + D + + ++ ++P+I++S+ + + ++ GAC +L KP+ +L+
Sbjct: 68 ISDVEMPDTDGFKLLEIGLEMDLPVIMLSAHSDYDSVMKGIIHGACDYLVKPVGLKELQN 127
Query: 61 VWQH 64
+W H
Sbjct: 128 IWHH 131
>sp|Q8L9Y3|ARR14_ARATH Two-component response regulator ARR14 OS=Arabidopsis thaliana
GN=ARR14 PE=1 SV=2
Length = 382
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/51 (58%), Positives = 39/51 (76%)
Query: 227 RKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASHLQ 277
+K R+VW+ ELH +F+ AV+ LG KA PK IL+ MNVPGL++ VASHLQ
Sbjct: 199 KKSRVVWSIELHQQFVNAVNKLGIDKAVPKRILELMNVPGLSRENVASHLQ 249
Score = 40.0 bits (92), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 28/47 (59%)
Query: 18 LVKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQH 64
L++ ++P+I+MS + GAC +L KPI ++LK +WQH
Sbjct: 80 LLEMDLPVIMMSVDGRTTTVMTGINHGACDYLIKPIRPEELKNIWQH 126
>sp|Q9M9B9|ARR19_ARATH Putative two-component response regulator ARR19 OS=Arabidopsis
thaliana GN=ARR19 PE=2 SV=2
Length = 407
Score = 63.9 bits (154), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%), Gaps = 4/58 (6%)
Query: 224 KKKRKPRIVWTSELHLKFIEAVSSLGDI-KARPKLI---LQKMNVPGLTQRQVASHLQ 277
KK RKPR+ WT ELH KF+EA+ +G I KA PK++ LQ+M + G+T+ VASHLQ
Sbjct: 211 KKPRKPRMTWTEELHQKFLEAIEIIGGIEKANPKVLVECLQEMRIEGITRSNVASHLQ 268
Score = 34.7 bits (78), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 1/60 (1%)
Query: 6 ISNIDSLSFVRVLV-KEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQH 64
+ ID L ++ + K ++P+++MS +A GAC ++ KP+ + + +WQH
Sbjct: 89 MPGIDGLQALKSITSKLDLPVVIMSDDNQTESVMKATFYGACDYVVKPVKEEVMANIWQH 148
>sp|O49397|ARR10_ARATH Two-component response regulator ARR10 OS=Arabidopsis thaliana
GN=ARR10 PE=1 SV=1
Length = 552
Score = 62.8 bits (151), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 40/60 (66%)
Query: 218 NNNGHVKKKRKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASHLQ 277
N+N ++KPR++WT ELH KF+ AV LG +A PK IL MNV LT+ VASHLQ
Sbjct: 173 NDNDDPTAQKKPRVLWTHELHNKFLAAVDHLGVERAVPKKILDLMNVDKLTRENVASHLQ 232
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MANVDISNIDSLSFVRVLVKE-EIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLK 59
+++VD+ ++D + ++ E ++P+I++S+ + + + + GAC +L KP+ ++LK
Sbjct: 67 ISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVKHGACDYLLKPVRIEELK 126
Query: 60 YVWQH 64
+WQH
Sbjct: 127 NIWQH 131
>sp|Q7Y0W3|EHD1_ORYSI Two-component response regulator EHD1 OS=Oryza sativa subsp. indica
PE=2 SV=1
Length = 341
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 205 MVPTEEKGKEMNENNNGHVKKKR---KPRIVWTSELHLKFIEAVSSLGDIKARPKLILQK 261
+ P E + ++ N NG + R K R+ WT++LH +FI AV+ LG+ KA PK IL
Sbjct: 172 LAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGI 231
Query: 262 MNVPGLTQRQVASHLQ 277
M V LT+ QVASHLQ
Sbjct: 232 MKVKHLTREQVASHLQ 247
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 17 VLVKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQHSY 66
V K IP ++M+S + + + GA FL KP+ ++L +WQH +
Sbjct: 78 VTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
>sp|Q7Y0W5|EHD1_ORYSJ Two-component response regulator EHD1 OS=Oryza sativa subsp.
japonica GN=EHD1 PE=1 SV=1
Length = 341
Score = 62.0 bits (149), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 3/76 (3%)
Query: 205 MVPTEEKGKEMNENNNGHVKKKR---KPRIVWTSELHLKFIEAVSSLGDIKARPKLILQK 261
+ P E + ++ N NG + R K R+ WT++LH +FI AV+ LG+ KA PK IL
Sbjct: 172 LAPLENEVRDDMVNYNGEITDIRDLGKSRLTWTTQLHRQFIAAVNHLGEDKAVPKKILGI 231
Query: 262 MNVPGLTQRQVASHLQ 277
M V LT+ QVASHLQ
Sbjct: 232 MKVKHLTREQVASHLQ 247
Score = 33.9 bits (76), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 27/50 (54%)
Query: 17 VLVKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQHSY 66
V K IP ++M+S + + + GA FL KP+ ++L +WQH +
Sbjct: 78 VTSKFGIPTVIMASSGDTNTVMKYVANGAFDFLLKPVRIEELSNIWQHIF 127
>sp|Q9FFH0|GLK2_ARATH Transcription activator GLK2 OS=Arabidopsis thaliana GN=GLK2 PE=2
SV=1
Length = 386
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 30/52 (57%), Positives = 37/52 (71%)
Query: 226 KRKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASHLQ 277
K+KP++ WT ELH KF++AV LG KA P IL+ MNV LT+ VASHLQ
Sbjct: 145 KKKPKVDWTPELHRKFVQAVEQLGVDKAVPSRILEIMNVKSLTRHNVASHLQ 196
>sp|P62598|ARR12_ARATH Two-component response regulator ARR12 OS=Arabidopsis thaliana
GN=ARR12 PE=2 SV=2
Length = 596
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/52 (59%), Positives = 37/52 (71%)
Query: 226 KRKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASHLQ 277
++K R+VWT ELH KF+ AV+ LG KA PK IL MNV LT+ VASHLQ
Sbjct: 193 QKKQRVVWTVELHKKFVAAVNQLGYEKAMPKKILDLMNVEKLTRENVASHLQ 244
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 1 MANVDISNIDSLSFVRVLVKE-EIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLK 59
+++VD+ ++D + ++ E ++P+I++S+ + + + + GAC +L KP+ ++LK
Sbjct: 67 ISDVDMPDMDGFKLLELVGLEMDLPVIMLSAHSDPKYVMKGVTHGACDYLLKPVRIEELK 126
Query: 60 YVWQH 64
+WQH
Sbjct: 127 NIWQH 131
>sp|Q9C9F6|APRR6_ARATH Putative two-component response regulator-like APRR6 OS=Arabidopsis
thaliana GN=APRR6 PE=3 SV=2
Length = 755
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 28/46 (60%), Positives = 33/46 (71%)
Query: 232 VWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASHLQ 277
+W SE H+KFI A+S LG+ RPK IL+ MN P LT RQV SHLQ
Sbjct: 226 LWNSERHMKFIAAISILGEEDFRPKSILEIMNDPNLTHRQVGSHLQ 271
Score = 57.0 bits (136), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 49/73 (67%), Gaps = 2/73 (2%)
Query: 1 MANVDISNIDSLSFVRVLVKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKY 60
+AN+++ +IDS SF+ L+ ++IP+IL++ L + ACF L+KPIS DD+K
Sbjct: 63 IANIEMPHIDSHSFLNALLLKDIPLILINPEIKTKEPSDLLTKRACFSLDKPISNDDIKN 122
Query: 61 VWQHSYIYKRRSK 73
+WQH ++ ++S+
Sbjct: 123 MWQH--VFSKKSQ 133
>sp|Q9FXD6|ARR11_ARATH Two-component response regulator ARR11 OS=Arabidopsis thaliana
GN=ARR11 PE=1 SV=1
Length = 521
Score = 58.5 bits (140), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 30/49 (61%), Positives = 36/49 (73%), Gaps = 1/49 (2%)
Query: 230 RIVWTSELHLKFIEAVSSLG-DIKARPKLILQKMNVPGLTQRQVASHLQ 277
R+VW+ ELH KF+ AV+ +G D KA PK IL MNVP LT+ VASHLQ
Sbjct: 195 RVVWSFELHHKFVNAVNQIGCDHKAGPKKILDLMNVPWLTRENVASHLQ 243
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 1 MANVDISNIDSLSFV-RVLVKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLK 59
+++V++ ++D + V ++ ++P+I+MS + + GAC +L KPI +LK
Sbjct: 61 ISDVNMPDMDGFKLLEHVGLELDLPVIMMSVDGETSRVMKGVQHGACDYLLKPIRMKELK 120
Query: 60 YVWQH 64
+WQH
Sbjct: 121 IIWQH 125
>sp|Q9LZJ8|ARR20_ARATH Putative two-component response regulator ARR20 OS=Arabidopsis
thaliana GN=ARR20 PE=2 SV=1
Length = 426
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 47/76 (61%), Gaps = 8/76 (10%)
Query: 210 EKGKEMNENNNGHVKKK---RKPRIVWTSELHLKFIEAVSSLGDI-KARPKLILQKM--- 262
E +E ++N H ++K +KPR+ WT ELH KF AV +G + KA PK IL+ M
Sbjct: 190 ESNEEGSKNTCDHKEEKSPTKKPRMQWTPELHHKFEVAVEKMGSLEKAFPKTILKYMQEE 249
Query: 263 -NVPGLTQRQVASHLQ 277
NV GLT+ VASHLQ
Sbjct: 250 LNVQGLTRNNVASHLQ 265
Score = 40.4 bits (93), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 43/73 (58%), Gaps = 3/73 (4%)
Query: 5 DISNIDSLSFVRVLVKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQH 64
DI+ +D+L+ + + ++P+++MS + ++ GAC FL KP+S + + +W+H
Sbjct: 96 DINGLDALNIIGK--QMDLPVVIMSHEYKKETVMESIKYGACDFLVKPVSKEVIAVLWRH 153
Query: 65 SYIYKRRSKIQLE 77
Y KR SK L+
Sbjct: 154 VY-RKRMSKSGLD 165
>sp|Q700D9|MYBF_ARATH Putative Myb family transcription factor At1g14600 OS=Arabidopsis
thaliana GN=At1g14600 PE=2 SV=2
Length = 255
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/50 (56%), Positives = 33/50 (66%), Gaps = 1/50 (2%)
Query: 229 PRIVWTSELHLKFIEAVSSLGD-IKARPKLILQKMNVPGLTQRQVASHLQ 277
PR+ WT ELH F+ AV LG KA PKL+L+ M+V GLT V SHLQ
Sbjct: 24 PRLRWTPELHRSFVHAVDLLGGQYKATPKLVLKIMDVKGLTISHVKSHLQ 73
>sp|Q9SIV3|GLK1_ARATH Transcription activator GLK1 OS=Arabidopsis thaliana GN=GLK1 PE=2
SV=2
Length = 420
Score = 56.6 bits (135), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 38/60 (63%), Gaps = 4/60 (6%)
Query: 218 NNNGHVKKKRKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASHLQ 277
NN G KRK ++ WT ELH +F+EAV LG KA P IL+ M V LT+ VASHLQ
Sbjct: 147 NNEG----KRKVKVDWTPELHRRFVEAVEQLGVDKAVPSRILELMGVHCLTRHNVASHLQ 202
>sp|Q9SAK5|APL_ARATH Myb family transcription factor APL OS=Arabidopsis thaliana GN=APL
PE=2 SV=2
Length = 358
Score = 56.2 bits (134), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 35/51 (68%), Gaps = 1/51 (1%)
Query: 228 KPRIVWTSELHLKFIEAVSSLGDI-KARPKLILQKMNVPGLTQRQVASHLQ 277
KPR+ WT ELH +F++AV+ LG KA PK I++ M V GLT + SHLQ
Sbjct: 34 KPRLRWTVELHERFVDAVAQLGGPDKATPKTIMRVMGVKGLTLYHLKSHLQ 84
>sp|Q9LYP5|ARR21_ARATH Putative two-component response regulator ARR21 OS=Arabidopsis
thaliana GN=ARR21 PE=2 SV=3
Length = 613
Score = 54.3 bits (129), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 58/120 (48%), Gaps = 20/120 (16%)
Query: 169 IQEQGGLIKTKR---SLDDDRGGEKKRNLNSDNENSNSFMVPTEEKGKEMNENNNGHV-- 223
+ EQ ++KTKR S D R +NS +N V T+ K NG
Sbjct: 161 VPEQADVLKTKRKNCSFKSD-----SRTVNS----TNGSCVSTDGSRKNRKRKPNGGPSD 211
Query: 224 ------KKKRKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASHLQ 277
+ +K +I WT LH F++A+ +G KA PK IL M+VP LT+ VASHLQ
Sbjct: 212 DGESMSQPAKKKKIQWTDSLHDLFLQAIRHIGLDKAVPKKILAFMSVPYLTRENVASHLQ 271
>sp|Q5NAN5|GLK2_ORYSJ Probable transcription factor GLK2 OS=Oryza sativa subsp. japonica
GN=GLK2 PE=2 SV=1
Length = 539
Score = 53.9 bits (128), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
Query: 216 NENNNGHVKKKRKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASH 275
+N++G KRK ++ WT ELH +F++AV LG KA P IL+ M + LT+ +ASH
Sbjct: 207 GKNSHG----KRKVKVDWTPELHRRFVQAVEQLGIDKAVPSRILELMGIECLTRHNIASH 262
Query: 276 LQ 277
LQ
Sbjct: 263 LQ 264
>sp|Q8GUN5|PHL1_ARATH Protein PHR1-LIKE 1 OS=Arabidopsis thaliana GN=PHL1 PE=1 SV=1
Length = 413
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 44/74 (59%), Gaps = 4/74 (5%)
Query: 205 MVPTEEKGKEMNENNNGHVKKKRKPRIVWTSELHLKFIEAVSSLGDI-KARPKLILQKMN 263
MV +E+ +++ N+ K R+ WT ELH F+EAV+ LG +A PK +L+ +N
Sbjct: 211 MVSSED---QLSGRNSSSSVATSKQRMRWTPELHEAFVEAVNQLGGSERATPKAVLKLLN 267
Query: 264 VPGLTQRQVASHLQ 277
PGLT V SHLQ
Sbjct: 268 NPGLTIYHVKSHLQ 281
>sp|Q9FJV5|KAN4_ARATH Probable transcription factor KAN4 OS=Arabidopsis thaliana GN=KAN4
PE=1 SV=1
Length = 276
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 27/52 (51%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 227 RKPRIVWTSELHLKFIEAVSSLGDI-KARPKLILQKMNVPGLTQRQVASHLQ 277
R PR+ WTS LH F+ AV LG +A PK +L+ MNV LT V SHLQ
Sbjct: 104 RAPRMRWTSTLHAHFVHAVQLLGGHERATPKSVLELMNVKDLTLAHVKSHLQ 155
>sp|Q93WJ9|KAN1_ARATH Transcription repressor KAN1 OS=Arabidopsis thaliana GN=KAN1 PE=1
SV=1
Length = 403
Score = 51.6 bits (122), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 224 KKKRKPRIVWTSELHLKFIEAVSSLGDI-KARPKLILQKMNVPGLTQRQVASHLQ 277
+ R PR+ WTS LH +F+ AV LG +A PK +L+ M+V LT V SHLQ
Sbjct: 215 RSMRAPRMRWTSSLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ 269
>sp|Q9ZVD3|ARR13_ARATH Putative two-component response regulator ARR13 OS=Arabidopsis
thaliana GN=ARR13 PE=2 SV=2
Length = 572
Score = 50.8 bits (120), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%)
Query: 224 KKKRKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASHLQ 277
+ +K +I WT+ L F++A+ +G K PK IL MNVP LT+ VASHLQ
Sbjct: 221 QPPKKKKIWWTNPLQDLFLQAIQHIGYDKVVPKKILAIMNVPYLTRENVASHLQ 274
Score = 34.3 bits (77), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%), Gaps = 2/52 (3%)
Query: 25 IILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQHSYIYKRRSKIQL 76
+++MSS N+ +L GA F+ KPI+ DL ++Q + YKR K L
Sbjct: 95 VLVMSSDPNK--EEESLSCGAMGFIPKPIAPTDLPKIYQFALTYKRNGKSTL 144
>sp|Q9C616|KAN2_ARATH Probable transcription factor KAN2 OS=Arabidopsis thaliana GN=KAN2
PE=2 SV=1
Length = 388
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 224 KKKRKPRIVWTSELHLKFIEAVSSLGDI-KARPKLILQKMNVPGLTQRQVASHLQ 277
+ R PR+ WT+ LH +F+ AV LG +A PK +L+ M+V LT V SHLQ
Sbjct: 209 RSMRAPRMRWTTTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ 263
>sp|Q0J235|ROLL9_ORYSJ Probable transcription factor RL9 OS=Oryza sativa subsp. japonica
GN=RL9 PE=2 SV=2
Length = 532
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 34/55 (61%), Gaps = 1/55 (1%)
Query: 224 KKKRKPRIVWTSELHLKFIEAVSSLGDI-KARPKLILQKMNVPGLTQRQVASHLQ 277
+ R PR+ WTS LH +F+ AV LG +A PK +L+ M+V LT V SHLQ
Sbjct: 320 RSMRAPRMRWTSTLHARFVHAVELLGGHERATPKSVLELMDVKDLTLAHVKSHLQ 374
>sp|Q9FJ16|APRR4_ARATH Putative two-component response regulator-like APRR4 OS=Arabidopsis
thaliana GN=APRR4 PE=3 SV=1
Length = 292
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 35/62 (56%)
Query: 216 NENNNGHVKKKRKPRIVWTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASH 275
+ N+ +K R+VW ELH F+ AV LG +A PK IL M V +++ VASH
Sbjct: 211 DHNDRACASSAKKRRVVWDEELHQNFLNAVDFLGLERAVPKKILDVMKVDYISRENVASH 270
Query: 276 LQ 277
LQ
Sbjct: 271 LQ 272
>sp|Q5Z5I4|GLK1_ORYSJ Probable transcription factor GLK1 OS=Oryza sativa subsp. japonica
GN=GLK1 PE=2 SV=1
Length = 455
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/45 (51%), Positives = 30/45 (66%)
Query: 233 WTSELHLKFIEAVSSLGDIKARPKLILQKMNVPGLTQRQVASHLQ 277
WT ELH +F++AV LG KA P IL+ M + LT+ +ASHLQ
Sbjct: 185 WTPELHRRFVQAVEQLGIDKAVPSRILEIMGIDSLTRHNIASHLQ 229
>sp|Q941I2|KAN3_ARATH Probable transcription factor KAN3 OS=Arabidopsis thaliana GN=KAN3
PE=2 SV=1
Length = 322
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 227 RKPRIVWTSELHLKFIEAVSSLGDI-KARPKLILQKMNVPGLTQRQVASHLQ 277
R PR+ WT+ LH F+ AV LG +A PK +L+ M+V LT V SHLQ
Sbjct: 163 RAPRMRWTTTLHAHFVHAVQLLGGHERATPKSVLELMDVQDLTLAHVKSHLQ 214
>sp|Q9LVG4|APRR3_ARATH Two-component response regulator-like APRR3 OS=Arabidopsis thaliana
GN=APRR3 PE=1 SV=1
Length = 495
Score = 45.4 bits (106), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 23 IPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQHSYIYKR 70
IP+I+MSS + + ++ L GA FL KPI ++LK +WQH +++R
Sbjct: 140 IPVIMMSSHDSMVLVFKCLSNGAVDFLVKPIRKNELKNLWQH--VWRR 185
>sp|Q93WK5|APRR7_ARATH Two-component response regulator-like APRR7 OS=Arabidopsis thaliana
GN=APRR7 PE=2 SV=1
Length = 727
Score = 44.3 bits (103), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 32/48 (66%), Gaps = 2/48 (4%)
Query: 23 IPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQHSYIYKR 70
IP+I+MSS + ++ L +GA FL KPI ++LK +WQH +++R
Sbjct: 154 IPVIMMSSHDSMGLVFKCLSKGAVDFLVKPIRKNELKILWQH--VWRR 199
>sp|Q6LA42|APRR5_ARATH Two-component response regulator-like APRR5 OS=Arabidopsis thaliana
GN=APRR5 PE=1 SV=2
Length = 558
Score = 43.9 bits (102), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/78 (23%), Positives = 50/78 (64%), Gaps = 6/78 (7%)
Query: 1 MANVDISNIDSLSFVRVLVKEEI----PIILMSSRRNEIFSWRALVEGACFFLEKPISFD 56
+ VD+ +I + + ++++ +I P+I+MS++ + ++ +++GA +L KP+ +
Sbjct: 100 LTEVDLPSISGYALLTLIMEHDICKNIPVIMMSTQDSVNTVYKCMLKGAADYLVKPLRRN 159
Query: 57 DLKYVWQHSYIYKRRSKI 74
+L+ +WQH +++R++ +
Sbjct: 160 ELRNLWQH--VWRRQTSL 175
>sp|A2XFB7|PRR73_ORYSI Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
indica GN=PRR73 PE=2 SV=2
Length = 767
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 19 VKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQHSYIYKR 70
+ ++IP+I+MSS + ++ L +GA FL KPI ++LK +WQH +++R
Sbjct: 153 ICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQH--VWRR 202
>sp|Q10N34|PRR73_ORYSJ Two-component response regulator-like PRR73 OS=Oryza sativa subsp.
japonica GN=PRR73 PE=2 SV=1
Length = 767
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 35/52 (67%), Gaps = 2/52 (3%)
Query: 19 VKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQHSYIYKR 70
+ ++IP+I+MSS + ++ L +GA FL KPI ++LK +WQH +++R
Sbjct: 153 ICKDIPVIMMSSNDSMGTVFKCLSKGAVDFLVKPIRKNELKNLWQH--VWRR 202
>sp|Q8L500|APRR9_ARATH Two-component response regulator-like APRR9 OS=Arabidopsis thaliana
GN=APRR9 PE=2 SV=2
Length = 468
Score = 43.1 bits (100), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 42/70 (60%), Gaps = 4/70 (5%)
Query: 1 MANVDISNIDSLSFVRVLVKEE----IPIILMSSRRNEIFSWRALVEGACFFLEKPISFD 56
+ +D+ +I + + ++++ E IP+I+MSS+ + + ++ GA +L KP+ +
Sbjct: 87 LTELDLPSISGFALLALVMEHEACKNIPVIMMSSQDSIKMVLKCMLRGAADYLIKPMRKN 146
Query: 57 DLKYVWQHSY 66
+LK +WQH +
Sbjct: 147 ELKNLWQHVW 156
>sp|Q689G6|PRR95_ORYSJ Two-component response regulator-like PRR95 OS=Oryza sativa subsp.
japonica GN=PRR95 PE=2 SV=1
Length = 623
Score = 42.7 bits (99), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 40/63 (63%), Gaps = 2/63 (3%)
Query: 23 IPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQHSYIYKRRSKIQLEDARKP 82
IP+I+MSS + ++ +++GA FL KPI ++L+ +WQH +++++ + D +
Sbjct: 119 IPVIMMSSNDSVSMVFKCMLKGAADFLVKPIRKNELRNLWQH--VWRKQLSSGVLDVQHT 176
Query: 83 EQE 85
+QE
Sbjct: 177 QQE 179
>sp|A2YQ93|PRR37_ORYSI Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
indica GN=PRR37 PE=2 SV=2
Length = 742
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
Query: 6 ISNIDSLSFVRVL---VKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVW 62
+S I LS R++ + + IP+I+MSS ++ L +GA FL KPI ++LK +W
Sbjct: 120 VSGISLLS--RIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLW 177
Query: 63 QHSYIYKR 70
QH +++R
Sbjct: 178 QH--VWRR 183
>sp|Q0D3B6|PRR37_ORYSJ Two-component response regulator-like PRR37 OS=Oryza sativa subsp.
japonica GN=PRR37 PE=2 SV=1
Length = 742
Score = 42.0 bits (97), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 41/68 (60%), Gaps = 7/68 (10%)
Query: 6 ISNIDSLSFVRVL---VKEEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVW 62
+S I LS R++ + + IP+I+MSS ++ L +GA FL KPI ++LK +W
Sbjct: 120 VSGISLLS--RIMNHNICKNIPVIMMSSNDAMGTVFKCLSKGAVDFLVKPIRKNELKNLW 177
Query: 63 QHSYIYKR 70
QH +++R
Sbjct: 178 QH--VWRR 183
>sp|Q689G9|PRR1_ORYSJ Two-component response regulator-like PRR1 OS=Oryza sativa subsp.
japonica GN=PRR1 PE=2 SV=2
Length = 518
Score = 37.4 bits (85), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/82 (26%), Positives = 41/82 (50%), Gaps = 6/82 (7%)
Query: 1 MANVDISNIDSLSFVRVLVK----EEIPIILMSSRRNEIFSWRALVEGACFFLEKPISFD 56
+A VD+ ++ + + IPII+MS+R + L GA +L KP+ +
Sbjct: 78 LAEVDLPVSKCFKMLKYIARNKELRHIPIIMMSNRDEVSVVVKCLRLGAAEYLVKPLRMN 137
Query: 57 DLKYVWQHSYIYKRRSKIQLED 78
+L +W H +++RR + L +
Sbjct: 138 ELLNLWTH--VWRRRRMLGLSE 157
>sp|Q1QI44|CHEB_NITHX Chemotaxis response regulator protein-glutamate methylesterase
OS=Nitrobacter hamburgensis (strain X14 / DSM 10229)
GN=cheB PE=3 SV=1
Length = 381
Score = 36.6 bits (83), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 13/94 (13%)
Query: 3 NVDISNIDSLS-FVRVLVKEEIPIILMSS---RRNEIFSWRALVEGACFFLEKPISFDDL 58
++++ +D +S ++L K+ I++M+S RRN S++AL GA ++ KP S ++
Sbjct: 71 DIEMPELDGISALPQLLAKKRNLIVIMASTLTRRNAEISFKALSLGAADYIPKPESTREI 130
Query: 59 KY--VWQHSYI-------YKRRSKIQLEDARKPE 83
+++H I KRR L AR+PE
Sbjct: 131 AAADIFKHDLIQKIRHLAAKRRRPAALASAREPE 164
>sp|O23100|APRR8_ARATH Putative two-component response regulator-like APRR8 OS=Arabidopsis
thaliana GN=APRR8 PE=2 SV=2
Length = 367
Score = 35.8 bits (81), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 55/237 (23%), Positives = 94/237 (39%), Gaps = 51/237 (21%)
Query: 22 EIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQHSYIYKRRSKIQLEDARK 81
EIP+++ + + L GA LEKP+ +D K +WQ + +R + Q+ D
Sbjct: 86 EIPVVVSGAHVKDAI-VECLCRGAKLCLEKPLMENDFKILWQFTVSRQRNFRSQI-DINP 143
Query: 82 PEQEILLNRGNISQGKRINEGGDDVSRNIANASA-TDDL-RYSINADQNEKNNKQMEVDA 139
PE+ +I+ + + G ++ +N N+ T+DL +Y Q K ++ + D
Sbjct: 144 PEK-----NHSITHTQSL---GAELKKNNNNSEVETEDLDKYKDELGQGNKRKERADTDT 195
Query: 140 QVHIFDENSVKESQNACNMEQHLVMANDQIQEQGGLIKTKRSLDDDRGGEKKRNLNSDNE 199
H E N ++ G K K DD E + + E
Sbjct: 196 GEHT-------EKNNGSDL--------------GDQKKPKLLFADDLQNETLEAVPNIEE 234
Query: 200 NSNSFMVPTEEKGKEMNENNNGHVKKKRKPRIV--------WTSELHLKFIEAVSSL 248
+N PTE K NG +K+ P +V W++E FI+ +S+
Sbjct: 235 ANNERKAPTEIK-------KNGESSEKKSPELVCMEEELQKWSAE---SFIDLTASV 281
>sp|Q04849|NTRX_AZOC5 Nitrogen assimilation regulatory protein NtrX OS=Azorhizobium
caulinodans (strain ATCC 43989 / DSM 5975 / ORS 571)
GN=ntrX PE=3 SV=1
Length = 454
Score = 32.7 bits (73), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 48/93 (51%), Gaps = 6/93 (6%)
Query: 7 SNIDSLSFVRVLVKE--EIPIILMSSRRNEIFSWRALVEGACFFLEKPISFDDLKYVWQH 64
S +D L + ++ +E E+P++++S N + A+ GA F+EKP + D L + +
Sbjct: 59 SRLDGLELLDIIKREHPEVPVVMISGHGNIETAVAAIKRGAYDFIEKPFNADRLVVITER 118
Query: 65 SY--IYKRRSKIQLEDARKPEQEILLNRGNISQ 95
+ + RR +L+ +P ++ R ++ Q
Sbjct: 119 ALETLRLRREVRELKQLTQPHT--MVGRSSVIQ 149
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.313 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 102,119,420
Number of Sequences: 539616
Number of extensions: 4434036
Number of successful extensions: 23639
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 81
Number of HSP's successfully gapped in prelim test: 343
Number of HSP's that attempted gapping in prelim test: 18504
Number of HSP's gapped (non-prelim): 3803
length of query: 277
length of database: 191,569,459
effective HSP length: 116
effective length of query: 161
effective length of database: 128,974,003
effective search space: 20764814483
effective search space used: 20764814483
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 60 (27.7 bits)