Your job contains 1 sequence.
>045926
MLRSSFLRRGYNKVAGIFGRAEAKKQDFPVLEGHPAAQESAEVALESRVTVQDNVKKVMK
EFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGS
CAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTN
MVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICD
SRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQPMEMVE
IM
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 045926
(302 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:504954878 - symbol:SDH2-3 "succinate dehydroge... 1167 1.6e-118 1
SGD|S000003964 - symbol:SDH2 "Iron-sulfur protein subunit... 866 1.3e-86 1
TAIR|locus:2168818 - symbol:SDH2-2 "succinate dehydrogena... 853 3.0e-85 1
UNIPROTKB|F1NNF7 - symbol:SDHB "Succinate dehydrogenase [... 846 1.7e-84 1
UNIPROTKB|Q9YHT2 - symbol:SDHB "Succinate dehydrogenase [... 846 1.7e-84 1
TAIR|locus:2086716 - symbol:SDH2-1 "succinate dehydrogena... 845 2.1e-84 1
CGD|CAL0000978 - symbol:SDH2 species:5476 "Candida albica... 837 1.5e-83 1
UNIPROTKB|Q59QN7 - symbol:SDH2 "Putative uncharacterized ... 837 1.5e-83 1
POMBASE|SPAC140.01 - symbol:sdh2 "succinate dehydrogenase... 836 1.9e-83 1
FB|FBgn0014028 - symbol:SdhB "Succinate dehydrogenase B" ... 832 5.0e-83 1
ZFIN|ZDB-GENE-030131-8005 - symbol:sdhb "succinate dehydr... 826 2.2e-82 1
MGI|MGI:1914930 - symbol:Sdhb "succinate dehydrogenase co... 824 3.6e-82 1
UNIPROTKB|F1Q3W8 - symbol:SDHB "Uncharacterized protein" ... 822 5.8e-82 1
RGD|1308598 - symbol:Sdhb "succinate dehydrogenase comple... 822 5.8e-82 1
UNIPROTKB|Q3T189 - symbol:SDHB "Succinate dehydrogenase [... 821 7.4e-82 1
UNIPROTKB|Q3B8J8 - symbol:sdhb "Succinate dehydrogenase [... 819 1.2e-81 1
UNIPROTKB|P21912 - symbol:SDHB "Succinate dehydrogenase [... 817 2.0e-81 1
UNIPROTKB|B0BM36 - symbol:sdhb "Succinate dehydrogenase [... 816 2.5e-81 1
UNIPROTKB|I3LDC1 - symbol:SDHB "Succinate dehydrogenase [... 815 3.2e-81 1
ASPGD|ASPL0000047708 - symbol:AN2332 species:162425 "Emer... 814 4.1e-81 1
UNIPROTKB|Q007T0 - symbol:SDHB "Succinate dehydrogenase [... 814 4.1e-81 1
WB|WBGene00006433 - symbol:sdhb-1 species:6239 "Caenorhab... 787 3.0e-78 1
UNIPROTKB|Q09545 - symbol:sdhb-1 "Succinate dehydrogenase... 787 3.0e-78 1
GENEDB_PFALCIPARUM|PFL0630w - symbol:PFL0630w "iron-sulfu... 785 4.8e-78 1
UNIPROTKB|Q8I5S5 - symbol:PFL0630w "Iron-sulfur subunit o... 785 4.8e-78 1
TIGR_CMR|APH_0159 - symbol:APH_0159 "succinate dehydrogen... 785 4.8e-78 1
TIGR_CMR|APH_0162 - symbol:APH_0162 "succinate dehydrogen... 785 4.8e-78 1
TIGR_CMR|ECH_0316 - symbol:ECH_0316 "succinate dehydrogen... 774 7.1e-77 1
UNIPROTKB|A8WPF0 - symbol:sdhb-1 "Succinate dehydrogenase... 769 2.4e-76 1
FB|FBgn0030975 - symbol:CG7349 species:7227 "Drosophila m... 755 7.3e-75 1
TIGR_CMR|SPO_0361 - symbol:SPO_0361 "succinate dehydrogen... 755 7.3e-75 1
DICTYBASE|DDB_G0270120 - symbol:sdhB "succinate dehydroge... 730 3.2e-72 1
TIGR_CMR|NSE_0534 - symbol:NSE_0534 "succinate dehydrogen... 685 1.9e-67 1
TIGR_CMR|CPS_2218 - symbol:CPS_2218 "succinate dehydrogen... 651 7.6e-64 1
TIGR_CMR|SO_1929 - symbol:SO_1929 "succinate dehydrogenas... 650 9.7e-64 1
UNIPROTKB|Q48K72 - symbol:sdhB "Succinate dehydrogenase, ... 643 5.4e-63 1
UNIPROTKB|Q4KFZ0 - symbol:sdhB "Succinate dehydrogenase, ... 637 2.3e-62 1
UNIPROTKB|Q9KQB2 - symbol:VC_2088 "Succinate dehydrogenas... 629 1.6e-61 1
TIGR_CMR|VC_2088 - symbol:VC_2088 "succinate dehydrogenas... 629 1.6e-61 1
UNIPROTKB|P07014 - symbol:sdhB "succinate dehydrogenase i... 625 4.3e-61 1
TIGR_CMR|CBU_1400 - symbol:CBU_1400 "succinate dehydrogen... 597 4.0e-58 1
UNIPROTKB|O53371 - symbol:sdhB "Succinate dehydrogenase a... 458 2.2e-43 1
TIGR_CMR|CHY_1370 - symbol:CHY_1370 "fumarate reductase, ... 384 1.5e-35 1
UNIPROTKB|Q9KNS4 - symbol:VC_2657 "Fumarate reductase, ir... 366 1.2e-33 1
TIGR_CMR|VC_2657 - symbol:VC_2657 "fumarate reductase, ir... 366 1.2e-33 1
TIGR_CMR|CHY_0064 - symbol:CHY_0064 "fumarate reductase, ... 313 6.1e-31 2
UNIPROTKB|P0AC47 - symbol:frdB "fumarate reductase iron-s... 334 3.0e-30 1
TIGR_CMR|SO_0399 - symbol:SO_0399 "fumarate reductase iro... 285 4.6e-25 1
TIGR_CMR|CJE_0459 - symbol:CJE_0459 "fumarate reductase, ... 246 6.3e-21 1
TIGR_CMR|CJE_0489 - symbol:CJE_0489 "succinate dehydrogen... 240 2.7e-20 1
TIGR_CMR|BA_4753 - symbol:BA_4753 "succinate dehydrogenas... 225 1.1e-18 1
UNIPROTKB|O53669 - symbol:Rv0247c "PROBABLE SUCCINATE DEH... 210 4.1e-17 1
UNIPROTKB|Q74DY7 - symbol:frdB "Succinate dehydrogenase/f... 122 3.1e-05 1
TIGR_CMR|GSU_1178 - symbol:GSU_1178 "fumarate reductase, ... 122 3.1e-05 1
UNIPROTKB|Q4KEF9 - symbol:glcF "Glycolate oxidase, iron-s... 113 0.00087 1
>TAIR|locus:504954878 [details] [associations]
symbol:SDH2-3 "succinate dehydrogenase 2-3"
species:3702 "Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=ISS] [GO:0045281 "succinate
dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005739 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005743
GO:GO:0009055 GO:GO:0046872 GO:GO:0006099 GO:GO:0051539
GO:GO:0051538 EMBL:AB013395 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0000104 GO:GO:0006121 GO:GO:0008177 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 ProtClustDB:PLN00129 GO:GO:0045281
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 EMBL:AJ278912 IPI:IPI00528859
RefSeq:NP_680465.2 UniGene:At.45474 ProteinModelPortal:Q9FJP9
SMR:Q9FJP9 STRING:Q9FJP9 PaxDb:Q9FJP9 EnsemblPlants:AT5G65165.1
GeneID:836640 KEGG:ath:AT5G65165 GeneFarm:2172 TAIR:At5g65165
InParanoid:Q9FJP9 OMA:CRTLTKD PhylomeDB:Q9FJP9
Genevestigator:Q9FJP9 Uniprot:Q9FJP9
Length = 309
Score = 1167 (415.9 bits), Expect = 1.6e-118, P = 1.6e-118
Identities = 213/277 (76%), Positives = 240/277 (86%)
Query: 27 DFPVLEGHPAAQESAEVALESRVTVQDNV---KKVMKEFRIYRWNPDRPDSKPFLQSYHV 83
DFP+L GH AAQ+ ++ L+S+ ++ K+V KEF+IYRWNPD+P+SKPFLQS+ V
Sbjct: 31 DFPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFV 90
Query: 84 DLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTSK 143
DLS CGPMVLD LQKIKAE D+SLSYRRSCREGICGSC+MNI GTNTVACLKPI+ +TSK
Sbjct: 91 DLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSK 150
Query: 144 PTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVPKDGREYRQSPADRKKLDGLY 203
PTIITPLPHM+VIKDLVVDLTNFYQQYKS+EPWLKT PKDGRE+RQSP DRKKLDGLY
Sbjct: 151 PTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLY 210
Query: 204 ECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRC 263
ECILCACCTTSCPSYWWNPEE+ GPAALL AYRWI DSRDE EERLQA+TE E K+YRC
Sbjct: 211 ECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRC 270
Query: 264 RAIKNCTATCPKGLDPADAIHKMKTKHMLSQPMEMVE 300
RAIKNCTATCPKGL+PA AI KMK+KH+LS P+ E
Sbjct: 271 RAIKNCTATCPKGLNPASAILKMKSKHLLSDPLVRTE 307
>SGD|S000003964 [details] [associations]
symbol:SDH2 "Iron-sulfur protein subunit of succinate
dehydrogenase" species:4932 "Saccharomyces cerevisiae" [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IDA]
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=IEA;IGI;IMP;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;IMP] [GO:0045333 "cellular respiration"
evidence=IGI;IMP] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051537 "2 iron,
2 sulfur cluster binding" evidence=IEA] [GO:0051538 "3 iron, 4
sulfur cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA;IDA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0006121
"mitochondrial electron transport, succinate to ubiquinone"
evidence=TAS] [GO:0031966 "mitochondrial membrane" evidence=IDA]
[GO:0016020 "membrane" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 SGD:S000003964 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
EMBL:BK006945 GO:GO:0051539 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0006121 GO:GO:0008177
PDB:1ORZ PDB:1PB4 PDBsum:1ORZ PDBsum:1PB4 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP GeneTree:ENSGT00390000013558 OrthoDB:EOG4PRX0W
EMBL:J05487 EMBL:Z73146 EMBL:AY558189 PIR:A35435 RefSeq:NP_013059.1
ProteinModelPortal:P21801 SMR:P21801 DIP:DIP-5856N IntAct:P21801
MINT:MINT-695166 STRING:P21801 PaxDb:P21801 PeptideAtlas:P21801
EnsemblFungi:YLL041C GeneID:850685 KEGG:sce:YLL041C CYGD:YLL041c
NextBio:966692 Genevestigator:P21801 GermOnline:YLL041C
Uniprot:P21801
Length = 266
Score = 866 (309.9 bits), Expect = 1.3e-86, P = 1.3e-86
Identities = 154/229 (67%), Positives = 184/229 (80%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F++YRWNPD P +KP LQSY VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 33 LKTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGIC 92
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNIGG NT+AC+ ID + SK I PLPHMF++KDLV DLTNFYQQYKSI+P+L+
Sbjct: 93 GSCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQ 152
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
+ PKDG E QS DRKKLDGLYECILCACC+TSCPSYWWN E+YLGPA L+ AYRW+
Sbjct: 153 RSSFPKDGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQAYRWL 212
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
DSRD+ T+ R +A+ + LYRC I NCT TCPKGL+P AI ++K
Sbjct: 213 IDSRDQATKTR-KAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIK 260
>TAIR|locus:2168818 [details] [associations]
symbol:SDH2-2 "succinate dehydrogenase 2-2" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=ISS] [GO:0045281 "succinate
dehydrogenase complex" evidence=ISS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IDA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0009055 GO:GO:0046872 GO:GO:0008270
GO:GO:0006099 GO:GO:0051539 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 EMBL:AB009052 GO:GO:0005749 GO:GO:0000104
GO:GO:0006121 GO:GO:0008177 eggNOG:COG0479 HOGENOM:HOG000160590
KO:K00235 ProtClustDB:PLN00129 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
EMBL:AJ278911 EMBL:AY074299 EMBL:AY123036 EMBL:AY087504
IPI:IPI00523799 RefSeq:NP_198881.1 UniGene:At.20145
UniGene:At.67187 UniGene:At.7421 ProteinModelPortal:Q8LB02
SMR:Q8LB02 IntAct:Q8LB02 STRING:Q8LB02 PaxDb:Q8LB02 PRIDE:Q8LB02
EnsemblPlants:AT5G40650.1 GeneID:834065 KEGG:ath:AT5G40650
GeneFarm:2169 TAIR:At5g40650 InParanoid:Q8LB02 OMA:NCSRTCP
PhylomeDB:Q8LB02 Genevestigator:Q8LB02 GermOnline:AT5G40650
Uniprot:Q8LB02
Length = 280
Score = 853 (305.3 bits), Expect = 3.0e-85, P = 3.0e-85
Identities = 160/230 (69%), Positives = 178/230 (77%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F+IYRWNPD P KP LQ Y +DL +CGPMVLDAL KIK E D SL++RRSCREGIC
Sbjct: 48 LKTFQIYRWNPDNP-GKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGIC 106
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G N +ACL I+ SK T ITPLPHMFVIKDLVVD+TNFY QYKSIEPWLK
Sbjct: 107 GSCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 165
Query: 179 T-NMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
N G+E QS DR KLDG+YECILCACC+TSCPSYWWNPE YLGPAALLHA RW
Sbjct: 166 RKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRW 225
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
I DSRDE T+ERL+A+ +DE KLYRC I NC CPKGL+P I +K
Sbjct: 226 ISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIK 274
>UNIPROTKB|F1NNF7 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9031 "Gallus gallus"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0016491 GO:GO:0006099 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP GeneTree:ENSGT00390000013558
IPI:IPI00580009 EMBL:AADN02040962 RefSeq:XP_003642553.1
Ensembl:ENSGALT00000000694 GeneID:100859720 KEGG:gga:100859720
Uniprot:F1NNF7
Length = 290
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 155/230 (67%), Positives = 183/230 (79%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+P KP +Q+Y VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 49 IKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGIC 108
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC K ID D SK T I PLPHM+V+KDLV DL+NFY QYKSIEP+LK
Sbjct: 109 GSCAMNIAGGNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLK 168
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
K G+E Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 169 KKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 228
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 229 MIDSRDDYTEERLAQL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 277
>UNIPROTKB|Q9YHT2 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9031 "Gallus gallus"
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0008177 "succinate dehydrogenase
(ubiquinone) activity" evidence=IEA] [GO:0006099 "tricarboxylic
acid cycle" evidence=IEA;TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
Reactome:REACT_115655 InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0044281 GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0022900
GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039
GO:GO:0008177 PDB:1YQ3 PDB:1YQ4 PDB:2FBW PDB:2H88 PDB:2H89 PDB:2WQY
PDBsum:1YQ3 PDBsum:1YQ4 PDBsum:2FBW PDBsum:2H88 PDBsum:2H89
PDBsum:2WQY eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390 HOVERGEN:HBG005483
OrthoDB:EOG4T4CW4 EMBL:AF095937 IPI:IPI00580009
RefSeq:NP_001074344.1 ProteinModelPortal:Q9YHT2 SMR:Q9YHT2
STRING:Q9YHT2 PRIDE:Q9YHT2 GeneID:770063 KEGG:gga:770063
InParanoid:Q9YHT2 EvolutionaryTrace:Q9YHT2 NextBio:20920287
Uniprot:Q9YHT2
Length = 290
Score = 846 (302.9 bits), Expect = 1.7e-84, P = 1.7e-84
Identities = 155/230 (67%), Positives = 183/230 (79%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+P KP +Q+Y VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 49 IKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGIC 108
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC K ID D SK T I PLPHM+V+KDLV DL+NFY QYKSIEP+LK
Sbjct: 109 GSCAMNIAGGNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLK 168
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
K G+E Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 169 KKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 228
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 229 MIDSRDDYTEERLAQL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 277
>TAIR|locus:2086716 [details] [associations]
symbol:SDH2-1 "succinate dehydrogenase 2-1" species:3702
"Arabidopsis thaliana" [GO:0005739 "mitochondrion"
evidence=ISM;IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;ISS] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0051536 "iron-sulfur cluster binding"
evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=IEA] [GO:0055114 "oxidation-reduction process"
evidence=IEA] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006121 "mitochondrial electron transport,
succinate to ubiquinone" evidence=ISS] [GO:0045281 "succinate
dehydrogenase complex" evidence=ISS] [GO:0008270 "zinc ion binding"
evidence=IDA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005739 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0005743 GO:GO:0009055 GO:GO:0046872
GO:GO:0008270 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 GO:GO:0006121 GO:GO:0008177
EMBL:AJ278910 EMBL:AB024028 EMBL:AY035013 EMBL:AY063053
EMBL:AY924777 EMBL:AY086901 IPI:IPI00517821 RefSeq:NP_001118718.1
RefSeq:NP_189374.1 UniGene:At.17610 UniGene:At.22540
UniGene:At.32384 UniGene:At.71559 ProteinModelPortal:Q8LBZ7
SMR:Q8LBZ7 IntAct:Q8LBZ7 STRING:Q8LBZ7 PaxDb:Q8LBZ7 PRIDE:Q8LBZ7
EnsemblPlants:AT3G27380.1 EnsemblPlants:AT3G27380.2 GeneID:822359
KEGG:ath:AT3G27380 GeneFarm:2168 TAIR:At3g27380 eggNOG:COG0479
HOGENOM:HOG000160590 InParanoid:Q9LTZ2 KO:K00235 OMA:WSADSRD
PhylomeDB:Q8LBZ7 ProtClustDB:PLN00129 Genevestigator:Q8LBZ7
GermOnline:AT3G27380 GO:GO:0045281 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 Uniprot:Q8LBZ7
Length = 279
Score = 845 (302.5 bits), Expect = 2.1e-84, P = 2.1e-84
Identities = 165/276 (59%), Positives = 190/276 (68%)
Query: 15 AGIFGRAEAKKQDFPVLEGH--PAAQESAEVALESRVTVQDNVKKVMKEFRIYRWNPDRP 72
+G+ GR K PA S E++ + +K F+IYRWNPD P
Sbjct: 3 SGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDNP 62
Query: 73 DSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVA 132
KP LQ+Y +DL +CGPMVLDAL KIK E D SL++RRSCREGICGSCAMNI G N +A
Sbjct: 63 -GKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGLA 121
Query: 133 CLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVPK-DGREYRQ 191
CL I + S+ TI TPLPHMFVIKDLVVD+TNFY QYKSIEPWLK +E Q
Sbjct: 122 CLTKIQDEASETTI-TPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVPAKEILQ 180
Query: 192 SPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQ 251
S DR KLDG+YECILCACC+TSCPSYWWNPE YLGPAALLHA RWI DSRDE T+ERL+
Sbjct: 181 SKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKERLE 240
Query: 252 ALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
A+ +DE KLYRC I NC CPKGL+P I +K
Sbjct: 241 AI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIK 275
>CGD|CAL0000978 [details] [associations]
symbol:SDH2 species:5476 "Candida albicans" [GO:0030445
"yeast-form cell wall" evidence=IDA] [GO:0000104 "succinate
dehydrogenase activity" evidence=NAS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=IEA] [GO:0009986 "cell
surface" evidence=IDA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 CGD:CAL0000978
Prosite:PS00198 GO:GO:0009986 GO:GO:0030445 GO:GO:0009055
GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
EMBL:AACQ01000173 EMBL:AACQ01000172 RefSeq:XP_711983.1
RefSeq:XP_712003.1 ProteinModelPortal:Q59QN7 SMR:Q59QN7
STRING:Q59QN7 GeneID:3646378 GeneID:3646397 KEGG:cal:CaO19.637
KEGG:cal:CaO19.8251 Uniprot:Q59QN7
Length = 263
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 151/250 (60%), Positives = 189/250 (75%)
Query: 38 QESAEVALESRVTVQDNVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQ 97
Q++ + ++ S T +K+F+IYRWNPD P+ +P +Q+Y VDL++CGPMVLDAL
Sbjct: 9 QKAVQFSVRSLATAAAEKAPRLKKFQIYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALL 68
Query: 98 KIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIK 157
KIK E D++L+ RRSCREGICGSCAMNIGG NT+ACL ID D SK + PLPHMFV++
Sbjct: 69 KIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDESKDLKVYPLPHMFVVR 128
Query: 158 DLVVDLTNFYQQYKSIEPWLKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPS 217
DLV DLT+FY+QYKSIEP+L+ P DGRE QS DR KLDGLYECILCACC+TSCPS
Sbjct: 129 DLVPDLTHFYKQYKSIEPYLQRESNPADGRENLQSIEDRAKLDGLYECILCACCSTSCPS 188
Query: 218 YWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGL 277
YWWN ++YLGPA L+ AYRW+ DSRD+ T R +A+ ++ LYRC I NC TCPKGL
Sbjct: 189 YWWNQQQYLGPAVLMQAYRWLIDSRDQATANR-KAMLQNSMSLYRCHTIMNCARTCPKGL 247
Query: 278 DPADAIHKMK 287
+P AI ++K
Sbjct: 248 NPGKAIAEIK 257
>UNIPROTKB|Q59QN7 [details] [associations]
symbol:SDH2 "Putative uncharacterized protein SDH2"
species:237561 "Candida albicans SC5314" [GO:0000104 "succinate
dehydrogenase activity" evidence=NAS] [GO:0009986 "cell surface"
evidence=IDA] [GO:0030445 "yeast-form cell wall" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 CGD:CAL0000978 Prosite:PS00198
GO:GO:0009986 GO:GO:0030445 GO:GO:0009055 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
EMBL:AACQ01000173 EMBL:AACQ01000172 RefSeq:XP_711983.1
RefSeq:XP_712003.1 ProteinModelPortal:Q59QN7 SMR:Q59QN7
STRING:Q59QN7 GeneID:3646378 GeneID:3646397 KEGG:cal:CaO19.637
KEGG:cal:CaO19.8251 Uniprot:Q59QN7
Length = 263
Score = 837 (299.7 bits), Expect = 1.5e-83, P = 1.5e-83
Identities = 151/250 (60%), Positives = 189/250 (75%)
Query: 38 QESAEVALESRVTVQDNVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQ 97
Q++ + ++ S T +K+F+IYRWNPD P+ +P +Q+Y VDL++CGPMVLDAL
Sbjct: 9 QKAVQFSVRSLATAAAEKAPRLKKFQIYRWNPDTPEVQPKMQTYEVDLNKCGPMVLDALL 68
Query: 98 KIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIK 157
KIK E D++L+ RRSCREGICGSCAMNIGG NT+ACL ID D SK + PLPHMFV++
Sbjct: 69 KIKNEQDATLTLRRSCREGICGSCAMNIGGRNTLACLCRIDQDESKDLKVYPLPHMFVVR 128
Query: 158 DLVVDLTNFYQQYKSIEPWLKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPS 217
DLV DLT+FY+QYKSIEP+L+ P DGRE QS DR KLDGLYECILCACC+TSCPS
Sbjct: 129 DLVPDLTHFYKQYKSIEPYLQRESNPADGRENLQSIEDRAKLDGLYECILCACCSTSCPS 188
Query: 218 YWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGL 277
YWWN ++YLGPA L+ AYRW+ DSRD+ T R +A+ ++ LYRC I NC TCPKGL
Sbjct: 189 YWWNQQQYLGPAVLMQAYRWLIDSRDQATANR-KAMLQNSMSLYRCHTIMNCARTCPKGL 247
Query: 278 DPADAIHKMK 287
+P AI ++K
Sbjct: 248 NPGKAIAEIK 257
>POMBASE|SPAC140.01 [details] [associations]
symbol:sdh2 "succinate dehydrogenase (ubiquinone)
iron-sulfur protein subunit (predicted)" species:4896
"Schizosaccharomyces pombe" [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0006099 "tricarboxylic acid cycle" evidence=ISS]
[GO:0006105 "succinate metabolic process" evidence=ISS] [GO:0006121
"mitochondrial electron transport, succinate to ubiquinone"
evidence=ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=ISS] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
PomBase:SPAC140.01 Prosite:PS00198 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 GO:GO:0006121 GO:GO:0008177 GO:GO:0006105
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 PIR:D32394 PIR:T37633 RefSeq:NP_593530.2
STRING:P21911 PRIDE:P21911 EnsemblFungi:SPAC140.01.1 GeneID:2542842
OrthoDB:EOG4PRX0W NextBio:20803883 Uniprot:P21911
Length = 275
Score = 836 (299.3 bits), Expect = 1.9e-83, P = 1.9e-83
Identities = 151/229 (65%), Positives = 182/229 (79%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F IYRWNP++P+ KP LQ Y VDL++CGPMVLDAL KIK E D +L++RRSCREGIC
Sbjct: 44 LKTFEIYRWNPEKPEVKPKLQKYTVDLTKCGPMVLDALIKIKNEQDPTLTFRRSCREGIC 103
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G+NT+AC+ I D +KPT I PLPH F++KDLV DLT FY+QYKSIEPWL+
Sbjct: 104 GSCAMNINGSNTLACICNIKKD-NKPTKIYPLPHCFIVKDLVPDLTYFYKQYKSIEPWLQ 162
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
+ +PKD +E+ QS ADR KLDGLYECILCACC+TSCPSYWWN EEYLGPA L+ AYRWI
Sbjct: 163 NDNIPKD-KEFYQSRADRAKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLMQAYRWI 221
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
DSRD+ T +RL + ++ +YRC I NC TCPKGL+P AI K+K
Sbjct: 222 IDSRDQATAKRLDVM-QNSMSVYRCHTIMNCARTCPKGLNPGLAIAKVK 269
>FB|FBgn0014028 [details] [associations]
symbol:SdhB "Succinate dehydrogenase B" species:7227
"Drosophila melanogaster" [GO:0008177 "succinate dehydrogenase
(ubiquinone) activity" evidence=ISS;NAS] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISS;NAS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS;NAS] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA] [GO:0006121 "mitochondrial electron
transport, succinate to ubiquinone" evidence=IDA] [GO:0005875
"microtubule associated complex" evidence=IDA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 InterPro:IPR017900 Prosite:PS00198
EMBL:AE013599 GO:GO:0005875 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039
GO:GO:0008177 eggNOG:COG0479 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 EMBL:L27705 EMBL:AY118923
RefSeq:NP_477101.1 UniGene:Dm.497 ProteinModelPortal:P21914
SMR:P21914 DIP:DIP-20115N IntAct:P21914 MINT:MINT-929605
STRING:P21914 PaxDb:P21914 EnsemblMetazoa:FBtr0086156 GeneID:35590
KEGG:dme:Dmel_CG3283 FlyBase:FBgn0014028 InParanoid:P21914
OrthoDB:EOG4XGXFW PhylomeDB:P21914 GenomeRNAi:35590 NextBio:794181
Bgee:P21914 GermOnline:CG3283 Uniprot:P21914
Length = 297
Score = 832 (297.9 bits), Expect = 5.0e-83, P = 5.0e-83
Identities = 154/261 (59%), Positives = 192/261 (73%)
Query: 45 LESRVTVQDNVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETD 104
LE + ++ + +K+F IYRWNPD KP++Q+Y VDL ECGPMVLDAL KIK E D
Sbjct: 32 LEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDALIKIKNEMD 91
Query: 105 SSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLT 164
+L++RRSCREGICGSCAMNIGGTNT+AC+ ID +TSK + PLPHM+V++DLV D+
Sbjct: 92 PTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVVRDLVPDMN 151
Query: 165 NFYQQYKSIEPWL--KTNMVPKDGR-EYRQSPADRKKLDGLYECILCACCTTSCPSYWWN 221
NFY+QY++I+PWL K K G+ +Y QS DR KLDGLYECILCACC+TSCPSYWWN
Sbjct: 152 NFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCSTSCPSYWWN 211
Query: 222 PEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPAD 281
E+YLGPA L+ AYRWI DSRDE + ERL L +D +YRC I NCT TCPKGL+P
Sbjct: 212 AEKYLGPAVLMQAYRWIIDSRDENSAERLNKL-KDPFSVYRCHTIMNCTRTCPKGLNPGR 270
Query: 282 AIHKMKT--KHMLSQPMEMVE 300
AI ++K + S+P +E
Sbjct: 271 AIAEIKKLLSGLASKPAPKLE 291
>ZFIN|ZDB-GENE-030131-8005 [details] [associations]
symbol:sdhb "succinate dehydrogenase complex,
subunit B, iron sulfur (Ip)" species:7955 "Danio rerio" [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0009055 "electron
carrier activity" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=IEA;ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0005743 "mitochondrial inner membrane"
evidence=IEA;ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=IEA;ISS] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=IEA;ISS] [GO:0016020 "membrane" evidence=IEA] [GO:0022900
"electron transport chain" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
UniPathway:UPA00223 InterPro:IPR017900 Prosite:PS00198
ZFIN:ZDB-GENE-030131-8005 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 OMA:WSADSRD
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:BC142799 IPI:IPI00511258 RefSeq:NP_001092210.1
UniGene:Dr.75182 ProteinModelPortal:A5PL98 SMR:A5PL98 STRING:A5PL98
PRIDE:A5PL98 Ensembl:ENSDART00000062264 GeneID:562149
KEGG:dre:562149 NextBio:20884271 Bgee:A5PL98 Uniprot:A5PL98
Length = 280
Score = 826 (295.8 bits), Expect = 2.2e-82, P = 2.2e-82
Identities = 151/236 (63%), Positives = 186/236 (78%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F+IYRW+PD KP +Q+Y +DL+ CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 38 IKKFQIYRWDPDTVGDKPRMQTYEIDLNTCGPMVLDALIKIKNEMDSTLTFRRSCREGIC 97
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+ACL ID +TSK T I PLPHM+V+KDLV D++NFY QYKSIEP+LK
Sbjct: 98 GSCAMNINGGNTLACLNKIDTNTSKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLK 157
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
+ G++ Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 158 KKDESQQGKQQYLQSVEDRQKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRW 217
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLS 293
+ DSRD+ TE+RL L +D LYRC I NCT TCPKGL+P AI ++K K M++
Sbjct: 218 MIDSRDDFTEDRLSKL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK-KMMVT 271
>MGI|MGI:1914930 [details] [associations]
symbol:Sdhb "succinate dehydrogenase complex, subunit B,
iron sulfur (Ip)" species:10090 "Mus musculus" [GO:0005739
"mitochondrion" evidence=IDA] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;IDA] [GO:0005749 "mitochondrial respiratory
chain complex II" evidence=IDA] [GO:0006099 "tricarboxylic acid
cycle" evidence=IEA] [GO:0006105 "succinate metabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0008177
"succinate dehydrogenase (ubiquinone) activity" evidence=ISO]
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0016491 "oxidoreductase activity"
evidence=IEA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0022904 "respiratory electron transport chain" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051536
"iron-sulfur cluster binding" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0051538 "3 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA] [GO:0055114 "oxidation-reduction
process" evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 MGI:MGI:1914930 GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0022904 GO:GO:0005749 GO:GO:0048039
GO:GO:0008177 GO:GO:0006105 eggNOG:COG0479 HOGENOM:HOG000160590
KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:AK003052 EMBL:AK003533 EMBL:AK009660 EMBL:AK153045
EMBL:AK169252 EMBL:BC013509 EMBL:BC051934 IPI:IPI00338536
PIR:PT0094 RefSeq:NP_075863.2 UniGene:Mm.246965
ProteinModelPortal:Q9CQA3 SMR:Q9CQA3 IntAct:Q9CQA3 STRING:Q9CQA3
PhosphoSite:Q9CQA3 REPRODUCTION-2DPAGE:Q9CQA3 PaxDb:Q9CQA3
PRIDE:Q9CQA3 Ensembl:ENSMUST00000010007 GeneID:67680 KEGG:mmu:67680
InParanoid:Q9CQA3 ChiTaRS:SDHB NextBio:325239 Bgee:Q9CQA3
Genevestigator:Q9CQA3 GermOnline:ENSMUSG00000009863 Uniprot:Q9CQA3
Length = 282
Score = 824 (295.1 bits), Expect = 3.6e-82, P = 3.6e-82
Identities = 150/230 (65%), Positives = 183/230 (79%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+ KP +Q+Y VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 41 IKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGIC 100
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID D SK + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 101 GSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 160
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G++ Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 161 KKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 220
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D +YRC I NCT TCPKGL+P AI ++K
Sbjct: 221 MIDSRDDFTEERLAKL-QDPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIK 269
>UNIPROTKB|F1Q3W8 [details] [associations]
symbol:SDHB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0016491
GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0005749 KO:K00235
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 EMBL:AAEX03001846 EMBL:AAEX03001845
RefSeq:NP_001239146.1 Ensembl:ENSCAFT00000025080 GeneID:478217
KEGG:cfa:478217 Uniprot:F1Q3W8
Length = 280
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 149/230 (64%), Positives = 183/230 (79%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+ KP +Q+Y +DL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 39 IKKFAIYRWDPDKTGDKPHMQTYEIDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGIC 98
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID + SK + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 99 GSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 158
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G++ Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 159 KKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 218
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 219 MIDSRDDFTEERLAKL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 267
>RGD|1308598 [details] [associations]
symbol:Sdhb "succinate dehydrogenase complex, subunit B, iron
sulfur (Ip)" species:10116 "Rattus norvegicus" [GO:0005739
"mitochondrion" evidence=ISO] [GO:0005743 "mitochondrial inner
membrane" evidence=ISO;ISS;IDA] [GO:0005749 "mitochondrial
respiratory chain complex II" evidence=ISO;ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0006105 "succinate
metabolic process" evidence=IMP] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IMP] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0022904 "respiratory
electron transport chain" evidence=IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=ISS] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 RGD:1308598 GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0022904 GO:GO:0005749 GO:GO:0048039
GO:GO:0008177 GO:GO:0006105 eggNOG:COG0479 HOGENOM:HOG000160590
KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:CH473968 EMBL:BC158620 EMBL:DQ403001 IPI:IPI00785564
PIR:B32394 RefSeq:NP_001094009.1 UniGene:Rn.3902
ProteinModelPortal:P21913 SMR:P21913 STRING:P21913
PhosphoSite:P21913 PRIDE:P21913 Ensembl:ENSRNOT00000010593
GeneID:298596 KEGG:rno:298596 UCSC:RGD:1308598 InParanoid:Q0QEZ3
SABIO-RK:P21913 NextBio:644032 Genevestigator:P21913
GermOnline:ENSRNOG00000007967 Uniprot:P21913
Length = 282
Score = 822 (294.4 bits), Expect = 5.8e-82, P = 5.8e-82
Identities = 151/230 (65%), Positives = 181/230 (78%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F IYRW+PD+ KP +Q+Y VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 41 IKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGIC 100
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID D K + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 101 GSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 160
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G++ Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 161 KKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 220
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRDE TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 221 MIDSRDEFTEERLAKL-QDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIK 269
>UNIPROTKB|Q3T189 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9913 "Bos taurus"
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0048039 "ubiquinone binding" evidence=ISS] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=ISS]
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0008177
"succinate dehydrogenase (ubiquinone) activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0009055 "electron carrier
activity" evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0022900 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP EMBL:BC102067 IPI:IPI00693011
RefSeq:NP_001035573.1 UniGene:Bt.13128 ProteinModelPortal:Q3T189
SMR:Q3T189 IntAct:Q3T189 STRING:Q3T189 PRIDE:Q3T189
Ensembl:ENSBTAT00000010949 GeneID:286840 KEGG:bta:286840 CTD:6390
GeneTree:ENSGT00390000013558 HOVERGEN:HBG005483 InParanoid:Q3T189
OrthoDB:EOG4T4CW4 NextBio:20806491 ArrayExpress:Q3T189
Uniprot:Q3T189
Length = 280
Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
Identities = 150/230 (65%), Positives = 181/230 (78%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+ KP +Q+Y +DL+ CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 39 IKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRSCREGIC 98
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID + SK + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 99 GSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 158
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
+ G+E Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 159 KKDESQGGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 218
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 219 MIDSRDDFTEERLAKL-QDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIK 267
>UNIPROTKB|Q3B8J8 [details] [associations]
symbol:sdhb "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:8355 "Xenopus laevis"
[GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390
HOVERGEN:HBG005483 HSSP:Q9YHT2 EMBL:BC043859 EMBL:BC106300
RefSeq:NP_001080247.1 UniGene:Xl.12560 ProteinModelPortal:Q3B8J8
SMR:Q3B8J8 PRIDE:Q3B8J8 GeneID:379939 KEGG:xla:379939
Xenbase:XB-GENE-970197 Uniprot:Q3B8J8
Length = 282
Score = 819 (293.4 bits), Expect = 1.2e-81, P = 1.2e-81
Identities = 150/230 (65%), Positives = 179/230 (77%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+P KP +Q+Y VDL+ CGPMVLDAL KIK E D +L++RRSCREGIC
Sbjct: 41 IKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGIC 100
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC ID + SK + I PLPHM+V+KDLV DL+NFY QYKSIEP+LK
Sbjct: 101 GSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLK 160
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
+ G+E Y QS DR KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 161 KKDKSQQGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRW 220
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 221 MIDSRDDFTEERLSKL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 269
>UNIPROTKB|P21912 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9606 "Homo sapiens"
[GO:0009055 "electron carrier activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0006105
"succinate metabolic process" evidence=IEA] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0051537 "2 iron, 2 sulfur cluster
binding" evidence=ISS] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS;TAS] [GO:0005749 "mitochondrial respiratory chain
complex II" evidence=ISS] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=ISS] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=TAS]
[GO:0022904 "respiratory electron transport chain" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0005739 "mitochondrion" evidence=IDA] Reactome:REACT_111217
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0044281 GO:GO:0009055 GO:GO:0046872
EMBL:CH471134 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 DrugBank:DB00139 EMBL:AL049569 GO:GO:0022904
GO:GO:0005749 MIM:606864 Orphanet:97286 Orphanet:29072
GO:GO:0048039 GO:GO:0008177 GO:GO:0006105 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP CTD:6390 HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4
EMBL:U17248 EMBL:U17886 EMBL:U17296 EMBL:U17880 EMBL:U17881
EMBL:U17882 EMBL:U17883 EMBL:U17884 EMBL:U17885 EMBL:AK312056
EMBL:BC007840 EMBL:D10245 EMBL:M32246 IPI:IPI00294911 PIR:I38895
RefSeq:NP_002991.2 UniGene:Hs.465924 ProteinModelPortal:P21912
SMR:P21912 IntAct:P21912 STRING:P21912 PhosphoSite:P21912
DMDM:20455488 UCD-2DPAGE:P21912 PaxDb:P21912 PeptideAtlas:P21912
PRIDE:P21912 DNASU:6390 Ensembl:ENST00000375499 GeneID:6390
KEGG:hsa:6390 UCSC:uc001bae.3 GeneCards:GC01M017345 HGNC:HGNC:10681
HPA:CAB009822 HPA:HPA002867 HPA:HPA002868 MIM:115310 MIM:171300
MIM:185470 MIM:612359 neXtProt:NX_P21912 Orphanet:201
PharmGKB:PA35606 InParanoid:P21912 PhylomeDB:P21912
BioCyc:MetaCyc:ENSG00000117118-MONOMER GenomeRNAi:6390
NextBio:24824 ArrayExpress:P21912 Bgee:P21912 CleanEx:HS_SDHB
Genevestigator:P21912 GermOnline:ENSG00000117118 Uniprot:P21912
Length = 280
Score = 817 (292.7 bits), Expect = 2.0e-81, P = 2.0e-81
Identities = 148/230 (64%), Positives = 183/230 (79%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+ KP +Q+Y VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 39 IKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGIC 98
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID + +K + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 99 GSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 158
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G++ Y QS +R+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 159 KKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 218
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 219 MIDSRDDFTEERLAKL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 267
>UNIPROTKB|B0BM36 [details] [associations]
symbol:sdhb "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0005749 "mitochondrial respiratory chain complex
II" evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 CTD:6390 GeneTree:ENSGT00390000013558
HOVERGEN:HBG005483 OrthoDB:EOG4T4CW4 EMBL:BC158270
RefSeq:NP_001120000.1 UniGene:Str.51669 ProteinModelPortal:B0BM36
SMR:B0BM36 STRING:B0BM36 Ensembl:ENSXETT00000029442
GeneID:100144957 KEGG:xtr:100144957 Xenbase:XB-GENE-970193
OMA:LIVDMEP Bgee:B0BM36 Uniprot:B0BM36
Length = 284
Score = 816 (292.3 bits), Expect = 2.5e-81, P = 2.5e-81
Identities = 150/230 (65%), Positives = 180/230 (78%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+P KP +Q+Y VDL+ECG MVLDAL KIK E D +L++RRSCREGIC
Sbjct: 43 IKKFAIYRWDPDKPGDKPRMQTYEVDLNECGSMVLDALIKIKNEMDPTLTFRRSCREGIC 102
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC ID + SK + I PLPHM+V+KDLV DL+NFY QYKSIEP+LK
Sbjct: 103 GSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLK 162
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G+E Y QS DR KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 163 KKDESQEGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRW 222
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 223 MIDSRDDYTEERLAKL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 271
>UNIPROTKB|I3LDC1 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9823 "Sus scrofa"
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle" evidence=IEA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0016491 GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
GeneTree:ENSGT00390000013558 EMBL:FP565627
Ensembl:ENSSSCT00000027692 Uniprot:I3LDC1
Length = 280
Score = 815 (292.0 bits), Expect = 3.2e-81, P = 3.2e-81
Identities = 147/230 (63%), Positives = 182/230 (79%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+ KP +Q+Y +DL+ CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 39 IKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRSCREGIC 98
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID + +K + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 99 GSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 158
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G++ Y QS +R+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 159 KKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 218
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 219 MIDSRDDFTEERLAKL-QDPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIK 267
>ASPGD|ASPL0000047708 [details] [associations]
symbol:AN2332 species:162425 "Emericella nidulans"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA;RCA]
[GO:0000104 "succinate dehydrogenase activity" evidence=RCA]
[GO:0051536 "iron-sulfur cluster binding" evidence=IEA] [GO:0009055
"electron carrier activity" evidence=IEA] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IEA]
[GO:0008177 "succinate dehydrogenase (ubiquinone) activity"
evidence=IEA] [GO:0035690 "cellular response to drug" evidence=IEA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 EMBL:BN001307 GO:GO:0016491 GO:GO:0006099
EMBL:AACD01000038 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
eggNOG:COG0479 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP OrthoDB:EOG4PRX0W RefSeq:XP_659936.1
ProteinModelPortal:Q5BAU8 SMR:Q5BAU8 STRING:Q5BAU8
EnsemblFungi:CADANIAT00009027 GeneID:2875591 KEGG:ani:AN2332.2
Uniprot:Q5BAU8
Length = 273
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 145/229 (63%), Positives = 180/229 (78%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
MK+F++YRWNPD+P KP +Q+Y +DL + GPM+LDAL +IK E D +L++RRSCREGIC
Sbjct: 40 MKKFQVYRWNPDKPSEKPKMQTYELDLKKTGPMMLDALIRIKNEIDPTLTFRRSCREGIC 99
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+ACL I DT+K + I PLPH +V+KDLV DLT Y+QYKSI+P+L+
Sbjct: 100 GSCAMNIDGVNTLACLCRIPTDTTKESRIYPLPHTYVVKDLVPDLTQIYKQYKSIKPYLQ 159
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
+ +DG E RQSP DRKKLDGLYECILC CC+TSCPSYWWN EEYLGPA LL +YRW+
Sbjct: 160 RDTKTEDGLENRQSPEDRKKLDGLYECILCFCCSTSCPSYWWNSEEYLGPAILLQSYRWL 219
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
DSRD+ T ER A+ ++ +YRC I NCT TCPKGL+PA AI ++K
Sbjct: 220 ADSRDQKTAERKHAI-DNSMSVYRCHTILNCTRTCPKGLNPARAISEIK 267
>UNIPROTKB|Q007T0 [details] [associations]
symbol:SDHB "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:9823 "Sus scrofa"
[GO:0048039 "ubiquinone binding" evidence=IDA] [GO:0005749
"mitochondrial respiratory chain complex II" evidence=IDA]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IDA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IDA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IDA]
[GO:0005743 "mitochondrial inner membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0006099
"tricarboxylic acid cycle" evidence=IEA] [GO:0008177 "succinate
dehydrogenase (ubiquinone) activity" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0022900 "electron transport
chain" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0022900 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 PDB:1ZOY PDB:1ZP0 PDB:3ABV
PDB:3AE1 PDB:3AE2 PDB:3AE3 PDB:3AE4 PDB:3AE5 PDB:3AE6 PDB:3AE7
PDB:3AE8 PDB:3AE9 PDB:3AEA PDB:3AEB PDB:3AEC PDB:3AED PDB:3AEE
PDB:3AEF PDB:3AEG PDB:3SFD PDB:3SFE PDBsum:1ZOY PDBsum:1ZP0
PDBsum:3ABV PDBsum:3AE1 PDBsum:3AE2 PDBsum:3AE3 PDBsum:3AE4
PDBsum:3AE5 PDBsum:3AE6 PDBsum:3AE7 PDBsum:3AE8 PDBsum:3AE9
PDBsum:3AEA PDBsum:3AEB PDBsum:3AEC PDBsum:3AED PDBsum:3AEE
PDBsum:3AEF PDBsum:3AEG PDBsum:3SFD PDBsum:3SFE GO:GO:0048039
GO:GO:0008177 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 CTD:6390
HOVERGEN:HBG005483 EMBL:DQ915498 EMBL:DQ403018
RefSeq:NP_001098423.1 UniGene:Ssc.55804 ProteinModelPortal:Q007T0
SMR:Q007T0 PRIDE:Q007T0 GeneID:414412 KEGG:ssc:414412
EvolutionaryTrace:Q007T0 Uniprot:Q007T0
Length = 280
Score = 814 (291.6 bits), Expect = 4.1e-81, P = 4.1e-81
Identities = 147/230 (63%), Positives = 181/230 (78%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+ KP +Q+Y +DL+ CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 39 IKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRSCREGIC 98
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID + K + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 99 GSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 158
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G++ Y QS +R+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 159 KKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 218
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 219 MIDSRDDFTEERLAKL-QDPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIK 267
>WB|WBGene00006433 [details] [associations]
symbol:sdhb-1 species:6239 "Caenorhabditis elegans"
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0009055 "electron carrier
activity" evidence=IEA] [GO:0040010 "positive regulation of growth
rate" evidence=IMP] [GO:0009792 "embryo development ending in birth
or egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0005739 "mitochondrion"
evidence=IDA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0009055 GO:GO:0046872
GO:GO:0010171 GO:GO:0000003 GO:GO:0006099 GO:GO:0051539
GO:GO:0022900 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 GO:GO:0048039 GO:GO:0008177 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP GeneTree:ENSGT00390000013558 EMBL:AB008569 EMBL:Z47809
PIR:T22083 PIR:T37260 RefSeq:NP_495992.1 ProteinModelPortal:Q09545
SMR:Q09545 STRING:Q09545 PaxDb:Q09545 EnsemblMetazoa:F42A8.2.1
EnsemblMetazoa:F42A8.2.2 GeneID:174482 KEGG:cel:CELE_F42A8.2
CTD:174482 WormBase:F42A8.2 InParanoid:Q09545 NextBio:884224
ArrayExpress:Q09545 Uniprot:Q09545
Length = 298
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 149/278 (53%), Positives = 187/278 (67%)
Query: 15 AGIFGRAEAKKQDFPVLEGHPAAQESAEVALESRVTVQDNVKKV---MKEFRIYRWNPDR 71
A + AE G PA +AE + S V KK +K F IYR+NP+
Sbjct: 6 ARLLHSAELAANAIRAASGAPATAAAAEASFPSTDDVAAKTKKTGNRIKTFEIYRFNPEA 65
Query: 72 PDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTV 131
P +KP +Q + VDL +CG M+LDAL KIK E D +L++RRSCREGICGSCAMNIGG NT+
Sbjct: 66 PGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGQNTL 125
Query: 132 ACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL-KTNMVPKDGREYR 190
AC+ ID DTSK T I PLPHMFV+KDLV D+ FY QY SI+PW+ K + ++
Sbjct: 126 ACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQKKTPLTLGEKQMH 185
Query: 191 QSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERL 250
QS A+R +LDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW+ DSRD+ ERL
Sbjct: 186 QSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWVIDSRDDYATERL 245
Query: 251 QALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
+ D ++C I NCT TCPK L+PA AI ++K+
Sbjct: 246 HRM-HDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKS 282
>UNIPROTKB|Q09545 [details] [associations]
symbol:sdhb-1 "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:6239 "Caenorhabditis
elegans" [GO:0051539 "4 iron, 4 sulfur cluster binding"
evidence=ISS] [GO:0051538 "3 iron, 4 sulfur cluster binding"
evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0005743 "mitochondrial inner membrane"
evidence=ISS] [GO:0051537 "2 iron, 2 sulfur cluster binding"
evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0009055 GO:GO:0046872
GO:GO:0010171 GO:GO:0000003 GO:GO:0006099 GO:GO:0051539
GO:GO:0022900 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0005749 GO:GO:0048039 GO:GO:0008177 eggNOG:COG0479
HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548 TIGRFAMs:TIGR00384
OMA:NCSRTCP GeneTree:ENSGT00390000013558 EMBL:AB008569 EMBL:Z47809
PIR:T22083 PIR:T37260 RefSeq:NP_495992.1 ProteinModelPortal:Q09545
SMR:Q09545 STRING:Q09545 PaxDb:Q09545 EnsemblMetazoa:F42A8.2.1
EnsemblMetazoa:F42A8.2.2 GeneID:174482 KEGG:cel:CELE_F42A8.2
CTD:174482 WormBase:F42A8.2 InParanoid:Q09545 NextBio:884224
ArrayExpress:Q09545 Uniprot:Q09545
Length = 298
Score = 787 (282.1 bits), Expect = 3.0e-78, P = 3.0e-78
Identities = 149/278 (53%), Positives = 187/278 (67%)
Query: 15 AGIFGRAEAKKQDFPVLEGHPAAQESAEVALESRVTVQDNVKKV---MKEFRIYRWNPDR 71
A + AE G PA +AE + S V KK +K F IYR+NP+
Sbjct: 6 ARLLHSAELAANAIRAASGAPATAAAAEASFPSTDDVAAKTKKTGNRIKTFEIYRFNPEA 65
Query: 72 PDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTV 131
P +KP +Q + VDL +CG M+LDAL KIK E D +L++RRSCREGICGSCAMNIGG NT+
Sbjct: 66 PGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGICGSCAMNIGGQNTL 125
Query: 132 ACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL-KTNMVPKDGREYR 190
AC+ ID DTSK T I PLPHMFV+KDLV D+ FY QY SI+PW+ K + ++
Sbjct: 126 ACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQKKTPLTLGEKQMH 185
Query: 191 QSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERL 250
QS A+R +LDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW+ DSRD+ ERL
Sbjct: 186 QSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRWVIDSRDDYATERL 245
Query: 251 QALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
+ D ++C I NCT TCPK L+PA AI ++K+
Sbjct: 246 HRM-HDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKS 282
>GENEDB_PFALCIPARUM|PFL0630w [details] [associations]
symbol:PFL0630w "iron-sulfur subunit of
succinate dehydrogenase" species:5833 "Plasmodium falciparum"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0005739 "mitochondrion" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005739 GO:GO:0009055
GO:GO:0006099 EMBL:AE014188 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0008177 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP ProtClustDB:CLSZ2431440
RefSeq:XP_001350535.1 HSSP:P07014 ProteinModelPortal:Q8I5S5
SMR:Q8I5S5 IntAct:Q8I5S5 MINT:MINT-1741055
EnsemblProtists:PFL0630w:mRNA GeneID:811179 KEGG:pfa:PFL0630w
EuPathDB:PlasmoDB:PF3D7_1212800 Uniprot:Q8I5S5
Length = 321
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 147/238 (61%), Positives = 175/238 (73%)
Query: 51 VQDNVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYR 110
V V K K+F I+R+NP +P ++++ VD+ CGPMVLD L KIK E DS+LS+R
Sbjct: 59 VNGEVVKRKKKFSIFRYNPTNK-KRPQMETFEVDIDNCGPMVLDVLIKIKDEIDSTLSFR 117
Query: 111 RSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQY 170
RSCREGICGSCAMNI G N +ACL ++ D + T I PLP+++V+KDLV DLTNFY QY
Sbjct: 118 RSCREGICGSCAMNINGKNGLACLTEVNRDKKEITEIQPLPNLYVMKDLVPDLTNFYNQY 177
Query: 171 KSIEPWLKTNMVPKDG-REYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPA 229
KSI+PWLK + G +E+ QS DRKKLDGLYECI+CA C+TSCPSYWWNPE YLGPA
Sbjct: 178 KSIDPWLKRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPA 237
Query: 230 ALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
L+ AYRWI DSRDE T+ERL + D KLYRC I NCT CPKGLDPA AI MK
Sbjct: 238 TLMQAYRWIVDSRDEYTKERLMEVN-DTMKLYRCHGIMNCTMCCPKGLDPAKAIKDMK 294
>UNIPROTKB|Q8I5S5 [details] [associations]
symbol:PFL0630w "Iron-sulfur subunit of succinate
dehydrogenase" species:36329 "Plasmodium falciparum 3D7"
[GO:0005739 "mitochondrion" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005739 GO:GO:0009055
GO:GO:0006099 EMBL:AE014188 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0008177 HOGENOM:HOG000160590 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP ProtClustDB:CLSZ2431440
RefSeq:XP_001350535.1 HSSP:P07014 ProteinModelPortal:Q8I5S5
SMR:Q8I5S5 IntAct:Q8I5S5 MINT:MINT-1741055
EnsemblProtists:PFL0630w:mRNA GeneID:811179 KEGG:pfa:PFL0630w
EuPathDB:PlasmoDB:PF3D7_1212800 Uniprot:Q8I5S5
Length = 321
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 147/238 (61%), Positives = 175/238 (73%)
Query: 51 VQDNVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYR 110
V V K K+F I+R+NP +P ++++ VD+ CGPMVLD L KIK E DS+LS+R
Sbjct: 59 VNGEVVKRKKKFSIFRYNPTNK-KRPQMETFEVDIDNCGPMVLDVLIKIKDEIDSTLSFR 117
Query: 111 RSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQY 170
RSCREGICGSCAMNI G N +ACL ++ D + T I PLP+++V+KDLV DLTNFY QY
Sbjct: 118 RSCREGICGSCAMNINGKNGLACLTEVNRDKKEITEIQPLPNLYVMKDLVPDLTNFYNQY 177
Query: 171 KSIEPWLKTNMVPKDG-REYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPA 229
KSI+PWLK + G +E+ QS DRKKLDGLYECI+CA C+TSCPSYWWNPE YLGPA
Sbjct: 178 KSIDPWLKRKTKKEKGQKEFYQSIEDRKKLDGLYECIMCASCSTSCPSYWWNPEYYLGPA 237
Query: 230 ALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
L+ AYRWI DSRDE T+ERL + D KLYRC I NCT CPKGLDPA AI MK
Sbjct: 238 TLMQAYRWIVDSRDEYTKERLMEVN-DTMKLYRCHGIMNCTMCCPKGLDPAKAIKDMK 294
>TIGR_CMR|APH_0159 [details] [associations]
symbol:APH_0159 "succinate dehydrogenase, iron-sulfur
protein" species:212042 "Anaplasma phagocytophilum HZ" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0006099
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:MVQFSLP RefSeq:YP_504783.1
RefSeq:YP_504786.1 ProteinModelPortal:Q2GLG8 SMR:Q2GLG8
STRING:Q2GLG8 GeneID:3930311 GeneID:3930807 KEGG:aph:APH_0159
KEGG:aph:APH_0162 PATRIC:20948886
BioCyc:APHA212042:GHPM-194-MONOMER
BioCyc:APHA212042:GHPM-197-MONOMER Uniprot:Q2GLG8
Length = 262
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 148/237 (62%), Positives = 179/237 (75%)
Query: 62 FRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSC 121
F+IYRW+PD ++ P + +Y++DL +CG MVLDAL K+K E DS+L++RRSCREGICGSC
Sbjct: 31 FKIYRWSPDDGEN-PRIDTYYIDLDKCGQMVLDALIKVKNEYDSTLTFRRSCREGICGSC 89
Query: 122 AMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNM 181
AMNI GTNT+AC K I D I PLPHM VIKDLV DL+NFY+QYKSI PWLK++
Sbjct: 90 AMNIDGTNTLACTKYIS-DIKGDVKIFPLPHMDVIKDLVPDLSNFYKQYKSISPWLKSDG 148
Query: 182 VPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDS 241
D E+ QS DR KLD +Y+CILCACC+TSCPSYWWNP++YLGPAALL YRW+ DS
Sbjct: 149 ARSDREEHLQSIEDRSKLDKVYDCILCACCSTSCPSYWWNPDKYLGPAALLQVYRWLVDS 208
Query: 242 RDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQPMEM 298
RD TEERL A ED KLYRC I NCT TCPK L+PA AI K+K M+ + +E+
Sbjct: 209 RDTATEERL-AFLEDAFKLYRCHTIMNCTKTCPKDLNPAKAIAKIK--QMMIKGLEL 262
>TIGR_CMR|APH_0162 [details] [associations]
symbol:APH_0162 "succinate dehydrogenase, iron-sulfur
protein" species:212042 "Anaplasma phagocytophilum HZ" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0006099
EMBL:CP000235 GenomeReviews:CP000235_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:MVQFSLP RefSeq:YP_504783.1
RefSeq:YP_504786.1 ProteinModelPortal:Q2GLG8 SMR:Q2GLG8
STRING:Q2GLG8 GeneID:3930311 GeneID:3930807 KEGG:aph:APH_0159
KEGG:aph:APH_0162 PATRIC:20948886
BioCyc:APHA212042:GHPM-194-MONOMER
BioCyc:APHA212042:GHPM-197-MONOMER Uniprot:Q2GLG8
Length = 262
Score = 785 (281.4 bits), Expect = 4.8e-78, P = 4.8e-78
Identities = 148/237 (62%), Positives = 179/237 (75%)
Query: 62 FRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSC 121
F+IYRW+PD ++ P + +Y++DL +CG MVLDAL K+K E DS+L++RRSCREGICGSC
Sbjct: 31 FKIYRWSPDDGEN-PRIDTYYIDLDKCGQMVLDALIKVKNEYDSTLTFRRSCREGICGSC 89
Query: 122 AMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNM 181
AMNI GTNT+AC K I D I PLPHM VIKDLV DL+NFY+QYKSI PWLK++
Sbjct: 90 AMNIDGTNTLACTKYIS-DIKGDVKIFPLPHMDVIKDLVPDLSNFYKQYKSISPWLKSDG 148
Query: 182 VPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDS 241
D E+ QS DR KLD +Y+CILCACC+TSCPSYWWNP++YLGPAALL YRW+ DS
Sbjct: 149 ARSDREEHLQSIEDRSKLDKVYDCILCACCSTSCPSYWWNPDKYLGPAALLQVYRWLVDS 208
Query: 242 RDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQPMEM 298
RD TEERL A ED KLYRC I NCT TCPK L+PA AI K+K M+ + +E+
Sbjct: 209 RDTATEERL-AFLEDAFKLYRCHTIMNCTKTCPKDLNPAKAIAKIK--QMMIKGLEL 262
>TIGR_CMR|ECH_0316 [details] [associations]
symbol:ECH_0316 "succinate dehydrogenase and fumarate
reductase iron-sulfur protein" species:205920 "Ehrlichia
chaffeensis str. Arkansas" [GO:0000104 "succinate dehydrogenase
activity" evidence=ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:CP000236 GenomeReviews:CP000236_GR GO:GO:0016491 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 eggNOG:COG0479 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
RefSeq:YP_507137.1 ProteinModelPortal:Q2GHE6 SMR:Q2GHE6
STRING:Q2GHE6 GeneID:3927401 KEGG:ech:ECH_0316 PATRIC:20576135
OMA:MVQFSLP BioCyc:ECHA205920:GJNR-316-MONOMER Uniprot:Q2GHE6
Length = 258
Score = 774 (277.5 bits), Expect = 7.1e-77, P = 7.1e-77
Identities = 143/231 (61%), Positives = 173/231 (74%)
Query: 57 KVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREG 116
K +K F+IYRW+PD D P + ++ +DL ECG MVLDAL KIK E DS+L++RRSCREG
Sbjct: 26 KNVKCFKIYRWSPD-DDENPRIDTFFIDLDECGQMVLDALIKIKNEVDSTLTFRRSCREG 84
Query: 117 ICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 176
ICGSCAMNI GTNT+AC K I D I PLPHM VIKDLV DL+NFY+QY+S+ PW
Sbjct: 85 ICGSCAMNIDGTNTLACTKAIS-DIKSDVNIYPLPHMHVIKDLVPDLSNFYKQYESVTPW 143
Query: 177 LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
++ P +E Q+ DR KLDG+Y+CILCACC+TSCPSYWWN ++YLGPAALL AYR
Sbjct: 144 IQAEE-PNHNKERLQTIEDRSKLDGIYDCILCACCSTSCPSYWWNSDKYLGPAALLQAYR 202
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
W+ DSRDE ++ RL L +D KLYRC I NCT TCPKGL+PA AI +K
Sbjct: 203 WLIDSRDEASDSRLDVL-DDAFKLYRCHTIMNCTKTCPKGLNPAKAIAHIK 252
>UNIPROTKB|A8WPF0 [details] [associations]
symbol:sdhb-1 "Succinate dehydrogenase [ubiquinone]
iron-sulfur subunit, mitochondrial" species:6238 "Caenorhabditis
briggsae" [GO:0005743 "mitochondrial inner membrane" evidence=ISS]
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0048039 "ubiquinone binding" evidence=ISS]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=ISS]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=ISS]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 GO:GO:0051538 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0048039 GO:GO:0008177
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 EMBL:HE600951 STRING:A8WPF0
EnsemblMetazoa:CBG00872 WormBase:CBG00872 Uniprot:A8WPF0
Length = 282
Score = 769 (275.8 bits), Expect = 2.4e-76, P = 2.4e-76
Identities = 137/231 (59%), Positives = 173/231 (74%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F IYR+NP+ P +KP +Q + VDL +CG M+LDAL KIK E D +L++RRSCREGIC
Sbjct: 37 IKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGIC 96
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL- 177
GSCAMNIGG NT+AC+ ID DTSK T I PLPHMFV+KDLV D+ FY QY SI+PW+
Sbjct: 97 GSCAMNIGGENTLACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQ 156
Query: 178 KTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
K + ++ QS A+R +LDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 157 KKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRW 216
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
+ DSRD+ +ERL + D ++C I NCT TCPK L+PA AI ++K+
Sbjct: 217 VIDSRDDYAQERLHRM-HDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKS 266
>FB|FBgn0030975 [details] [associations]
symbol:CG7349 species:7227 "Drosophila melanogaster"
[GO:0005749 "mitochondrial respiratory chain complex II"
evidence=ISS] [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0009055 "electron carrier activity" evidence=IEA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0051537 "2
iron, 2 sulfur cluster binding" evidence=IEA] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 GO:GO:0016491
GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 eggNOG:COG0479 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 HSSP:P07014 EMBL:AY089563
ProteinModelPortal:Q8SXL9 SMR:Q8SXL9 STRING:Q8SXL9 PaxDb:Q8SXL9
PRIDE:Q8SXL9 FlyBase:FBgn0030975 InParanoid:Q8SXL9
OrthoDB:EOG41JWTV ArrayExpress:Q8SXL9 Bgee:Q8SXL9 Uniprot:Q8SXL9
Length = 437
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 140/234 (59%), Positives = 174/234 (74%)
Query: 56 KKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCRE 115
K+ +K F IYRW +P +P Q+Y VDL +CG MVLDAL KIK E D +L++RRSCRE
Sbjct: 184 KQRLKTFEIYRW---KPGDQPQTQTYEVDLEQCGAMVLDALIKIKNEMDPTLTFRRSCRE 240
Query: 116 GICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEP 175
GICGSCAMNI GTNT+AC+ ID + SK I PLPH++V++DLV D++ FY QY+SI+P
Sbjct: 241 GICGSCAMNINGTNTLACVSSIDQNESKCCRIYPLPHLYVVRDLVPDMSQFYDQYRSIQP 300
Query: 176 WLKTNMVPKDG--REYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLH 233
WL+ + ++ +Y QS DR LDGLYECILCACC TSCPSYWWN +YLGPA L+
Sbjct: 301 WLQRKDLKREAGTAQYLQSVDDRLVLDGLYECILCACCQTSCPSYWWNSNKYLGPAVLMQ 360
Query: 234 AYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
AYRW+ DSRDE TE+RL L +D KLYRC +I NCT TCPK L+PA AI ++K
Sbjct: 361 AYRWVIDSRDEATEQRLDFL-KDPWKLYRCHSIMNCTNTCPKHLNPARAIIQLK 413
>TIGR_CMR|SPO_0361 [details] [associations]
symbol:SPO_0361 "succinate dehydrogenase, iron-sulfur
protein" species:246200 "Ruegeria pomeroyi DSS-3" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379
InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0006099 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
OMA:LIVDMEP RefSeq:YP_165624.1 ProteinModelPortal:Q5LXE7 SMR:Q5LXE7
GeneID:3196472 KEGG:sil:SPO0361 PATRIC:23373981 Uniprot:Q5LXE7
Length = 259
Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
Identities = 141/236 (59%), Positives = 177/236 (75%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+++F+IYRWNPD P + +Y VD+ +CGPMVLDAL IK + D++L++RRSCREGIC
Sbjct: 27 LRKFQIYRWNPD-DGQNPRVDTYFVDMDDCGPMVLDALIYIKNKVDATLTFRRSCREGIC 85
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC+ +D + I PLPHM V+KDL+ DLT+FY Q+ SI PWL+
Sbjct: 86 GSCAMNIDGINTLACIYGMD-EIKGDVKIYPLPHMPVVKDLIPDLTHFYAQHASIMPWLE 144
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
T + +E++QS DR+KLDGLYEC++CA C+TSCPSYWWN + YLGPAALLHAYRWI
Sbjct: 145 TK-TNRPAKEWKQSIEDRRKLDGLYECVMCASCSTSCPSYWWNGDRYLGPAALLHAYRWI 203
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQ 294
DSRDE T ERL L ED KLYRC I NC TCPKGL+PA AI ++K K M+ +
Sbjct: 204 IDSRDEATGERLDNL-EDPFKLYRCHTIMNCAKTCPKGLNPAKAIAEIK-KMMVER 257
>DICTYBASE|DDB_G0270120 [details] [associations]
symbol:sdhB "succinate dehydrogenase (ubiquinone)"
species:44689 "Dictyostelium discoideum" [GO:0055114
"oxidation-reduction process" evidence=IEA] [GO:0051537 "2 iron, 2
sulfur cluster binding" evidence=IEA;ISS] [GO:0051536 "iron-sulfur
cluster binding" evidence=IEA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA;ISS] [GO:0008177 "succinate dehydrogenase (ubiquinone)
activity" evidence=IEA] [GO:0051539 "4 iron, 4 sulfur cluster
binding" evidence=IEA;ISS] [GO:0051538 "3 iron, 4 sulfur cluster
binding" evidence=IEA;ISS] [GO:0048039 "ubiquinone binding"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=ISS]
[GO:0006121 "mitochondrial electron transport, succinate to
ubiquinone" evidence=ISS] [GO:0005749 "mitochondrial respiratory
chain complex II" evidence=ISS] [GO:0005743 "mitochondrial inner
membrane" evidence=IEA;ISS] [GO:0005739 "mitochondrion"
evidence=IEA;ISS] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0022900 "electron transport chain" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS00197 PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 dictyBase:DDB_G0270120 Prosite:PS00198
EMBL:AAFI02000005 GenomeReviews:CM000150_GR GO:GO:0009055
GO:GO:0046872 GO:GO:0006099 GO:GO:0051539 GO:GO:0051538
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0005749 GO:GO:0006121 GO:GO:0048039
GO:GO:0008177 eggNOG:COG0479 KO:K00235 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP RefSeq:XP_646559.1 HSSP:Q9YHT2
ProteinModelPortal:Q55CC2 SMR:Q55CC2 STRING:Q55CC2 PRIDE:Q55CC2
EnsemblProtists:DDB0231383 GeneID:8617527 KEGG:ddi:DDB_G0270120
ProtClustDB:CLSZ2431440 Uniprot:Q55CC2
Length = 287
Score = 730 (262.0 bits), Expect = 3.2e-72, P = 3.2e-72
Identities = 140/281 (49%), Positives = 192/281 (68%)
Query: 13 KVAGIFGRAEAKKQDFPVLEGHPAAQESAEVALESRVTVQDNVKKVMKEFRIYRWNPDRP 72
K A + R+ + F A S ++ ++ T + K F++YR+N +
Sbjct: 7 KRASVLARSNGIQSAFYTTTAKTEASSSPQMKIK---TAEK--KDHFVNFQVYRYN-EET 60
Query: 73 DSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVA 132
+KP++Q+Y+++L +CGPMVLDAL IK D +LS+RRSCREGICGSCAMN+ G+NT+A
Sbjct: 61 TAKPYIQTYNINLKDCGPMVLDALLLIKNNIDPTLSFRRSCREGICGSCAMNLNGSNTLA 120
Query: 133 CLKPIDGDTSKPTI-ITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNM-VPK-DGREY 189
C K I S T+ + PLPHM V++DL+ DL++FY Q+KSI+PWL+ + VP+ +G+E
Sbjct: 121 CTKKITDCLSGDTVKVYPLPHMHVVRDLIPDLSHFYTQHKSIKPWLEPAVDVPRYNGKEI 180
Query: 190 RQSPADRKKLDGLYECILCACCTTSCPSYWWNPEE---YLGPAALLHAYRWICDSRDELT 246
QS +R KLDGLYECILCACC+TSCPSYWW+ YLGPA LL AYRWI DSRD +
Sbjct: 181 LQSKENRHKLDGLYECILCACCSTSCPSYWWSEGGDGGYLGPAVLLQAYRWIADSRDSIQ 240
Query: 247 EERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
++RL L+ED+ K+Y+C I NCTA CPKGL+P +I +K
Sbjct: 241 KDRLAILSEDQMKVYKCHTIMNCTAVCPKGLNPGKSIANIK 281
>TIGR_CMR|NSE_0534 [details] [associations]
symbol:NSE_0534 "succinate dehydrogenase and fumarate
reductase iron-sulfur protein" species:222891 "Neorickettsia
sennetsu str. Miyayama" [GO:0000104 "succinate dehydrogenase
activity" evidence=ISS] [GO:0006099 "tricarboxylic acid cycle"
evidence=ISS] [GO:0009060 "aerobic respiration" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS00197 PROSITE:PS51085 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0016491 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 EMBL:CP000237 GenomeReviews:CP000237_GR
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
RefSeq:YP_506417.1 ProteinModelPortal:Q2GDM9 SMR:Q2GDM9
STRING:Q2GDM9 GeneID:3932205 KEGG:nse:NSE_0534 PATRIC:22681115
OMA:PSHAIER BioCyc:NSEN222891:GHFU-553-MONOMER Uniprot:Q2GDM9
Length = 254
Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
Identities = 125/224 (55%), Positives = 163/224 (72%)
Query: 64 IYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAM 123
+YR++P D P Y+V+ +C PM+LDAL K+K E D +L++RRSCREG+CGSCAM
Sbjct: 30 VYRFSPG--DDNPRRDIYYVNQKDCAPMILDALIKVKGEIDPTLTFRRSCREGVCGSCAM 87
Query: 124 NIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVP 183
NI G NT+AC K +D + I PLPHM V+KDLV DLT F+Q Y+SI+PWL +
Sbjct: 88 NIDGRNTLACTKRMD-EIKGEIRIYPLPHMRVLKDLVTDLTVFFQHYRSIKPWLHSEK-S 145
Query: 184 KDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRD 243
+G+E+ Q P +R+KL GL++CILCACC+TSCPS+WWN ++YLGPAALL AYRW+ DSRD
Sbjct: 146 NNGKEHLQMPEEREKLAGLHDCILCACCSTSCPSFWWNGDKYLGPAALLQAYRWLVDSRD 205
Query: 244 ELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ERL+ L D +LYRC I NC CPKGL+PA AI ++K
Sbjct: 206 SKKKERLEFLA-DSFRLYRCHTIMNCAQACPKGLNPAKAIAEIK 248
>TIGR_CMR|CPS_2218 [details] [associations]
symbol:CPS_2218 "succinate dehydrogenase, iron-sulfur
protein" species:167879 "Colwellia psychrerythraea 34H" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0006099 GO:GO:0051536 EMBL:CP000083 GenomeReviews:CP000083_GR
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
KO:K00240 ProtClustDB:PRK05950 RefSeq:YP_268943.1
ProteinModelPortal:Q482S4 SMR:Q482S4 STRING:Q482S4 GeneID:3518711
KEGG:cps:CPS_2218 PATRIC:21467547
BioCyc:CPSY167879:GI48-2288-MONOMER Uniprot:Q482S4
Length = 235
Score = 651 (234.2 bits), Expect = 7.6e-64, P = 7.6e-64
Identities = 122/232 (52%), Positives = 167/232 (71%)
Query: 59 MKE-FRIYRWNPDRPDSKPFLQSYHVDLSECGP-MVLDALQKIKAETDSSLSYRRSCREG 116
MK+ F IYR+NPD D+ P+++ Y +++ E MVLDAL +K ETDSSLS+RRSCREG
Sbjct: 1 MKQLFSIYRYNPD-VDNAPYMKDYELEVPEGSDLMVLDALILLK-ETDSSLSFRRSCREG 58
Query: 117 ICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 176
+CGS +N+ G N +AC+ P+ + I+ PLP + V++DL++D+T FYQQY+ I+P+
Sbjct: 59 VCGSDGLNMNGKNGLACITPLSELKADKIILRPLPGLPVVRDLIIDMTQFYQQYEKIKPY 118
Query: 177 LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
L + P RE Q+ +R KLDGLYECILCACC+TSCPS+WWNP++++GPA LLHAYR
Sbjct: 119 LINDAQPA-ARENIQTIEERDKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLHAYR 177
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
++ DSRD TEERL L +D ++RC I NC CPKGL+P AI +K+
Sbjct: 178 FLIDSRDTATEERLDGL-QDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKS 228
>TIGR_CMR|SO_1929 [details] [associations]
symbol:SO_1929 "succinate dehydrogenase, iron-sulfur
protein" species:211586 "Shewanella oneidensis MR-1" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0006099 GO:GO:0051536 EMBL:AE014299
GenomeReviews:AE014299_GR Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0008177
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
KO:K00240 ProtClustDB:PRK05950 HSSP:P07014 RefSeq:NP_717536.1
ProteinModelPortal:Q8EFP1 SMR:Q8EFP1 GeneID:1169691
KEGG:son:SO_1929 PATRIC:23523491 Uniprot:Q8EFP1
Length = 235
Score = 650 (233.9 bits), Expect = 9.7e-64, P = 9.7e-64
Identities = 122/232 (52%), Positives = 166/232 (71%)
Query: 59 MK-EFRIYRWNPDRPDSKPFLQSYHVDLSE-CGPMVLDALQKIKAETDSSLSYRRSCREG 116
MK EF +YR+NPD D+KP++Q Y +++++ MVLDAL K+K E D +L +RRSCREG
Sbjct: 1 MKLEFAVYRYNPD-VDTKPYMQDYSLEVADGTDMMVLDALIKLK-EKDPTLVFRRSCREG 58
Query: 117 ICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 176
+CGS +N+ G N +AC+ P+ K I PLP M V++DLVVDLT FY+QY+ I+P+
Sbjct: 59 VCGSDGLNMNGKNGLACITPVSTFKGKKLEIRPLPGMPVVRDLVVDLTQFYKQYEKIKPF 118
Query: 177 LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
L N + RE+ QSP R LDGLYECI+CACC+T+CPS+WWNP++++GP+ LLHAYR
Sbjct: 119 L-INDDKQPAREHLQSPEQRAHLDGLYECIMCACCSTACPSFWWNPDKFIGPSGLLHAYR 177
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
++ DSRD TEERL L +D ++RC I NC CPKGL+P AI +K+
Sbjct: 178 FLIDSRDTATEERLSEL-DDAYSVFRCHGIMNCVDVCPKGLNPTKAIGHIKS 228
>UNIPROTKB|Q48K72 [details] [associations]
symbol:sdhB "Succinate dehydrogenase, iron-sulfur protein"
species:264730 "Pseudomonas syringae pv. phaseolicola 1448A"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0006099 GO:GO:0051536 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
EMBL:CP000058 GenomeReviews:CP000058_GR GO:GO:0000104
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00240 ProtClustDB:PRK05950
RefSeq:YP_274203.1 ProteinModelPortal:Q48K72 SMR:Q48K72
STRING:Q48K72 GeneID:3555647 KEGG:psp:PSPPH_1979 PATRIC:19973160
OMA:DAAPFMQ Uniprot:Q48K72
Length = 234
Score = 643 (231.4 bits), Expect = 5.4e-63, P = 5.4e-63
Identities = 123/237 (51%), Positives = 166/237 (70%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
M + +YR+NP++ D+ PF+Q + VD MVLD L +K E D SYRRSCREG+C
Sbjct: 1 MLQVSVYRYNPEQ-DAAPFMQEFQVDTGGKDLMVLDVLALVK-EQDQGFSYRRSCREGVC 58
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSK-PTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 177
GS MNI G N +AC+ P+ +K I+ PLP + VI+DLVVD++ FY+QY+ ++P+L
Sbjct: 59 GSDGMNINGKNGLACITPLSAVVAKNKLIVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFL 118
Query: 178 KTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
+ N P E Q+P +R+KLDGLYECILCACC+TSCPS+WWNP+++LGPAALL AYR+
Sbjct: 119 Q-NDTPAPAIERLQTPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRF 177
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQ 294
+ DSRD T ERL +L +D ++RCR I NC CPKGL+P AI ++ +ML Q
Sbjct: 178 LADSRDTRTNERLASL-DDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHVR--NMLLQ 231
>UNIPROTKB|Q4KFZ0 [details] [associations]
symbol:sdhB "Succinate dehydrogenase, iron-sulfur protein"
species:220664 "Pseudomonas protegens Pf-5" [GO:0005886 "plasma
membrane" evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005886 GO:GO:0009055 GO:GO:0006099
GO:GO:0051536 EMBL:CP000076 GenomeReviews:CP000076_GR
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:DAAPFMQ RefSeq:YP_258843.1
ProteinModelPortal:Q4KFZ0 SMR:Q4KFZ0 STRING:Q4KFZ0 GeneID:3478177
KEGG:pfl:PFL_1717 PATRIC:19872663
BioCyc:PFLU220664:GIX8-1725-MONOMER Uniprot:Q4KFZ0
Length = 234
Score = 637 (229.3 bits), Expect = 2.3e-62, P = 2.3e-62
Identities = 125/237 (52%), Positives = 162/237 (68%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
M + +YR+NPD DS P Q + VD MVLD L IK E D SYRRSCREG+C
Sbjct: 1 MLQVEVYRYNPDT-DSAPKTQVFQVDTGGKDLMVLDVLALIK-EQDEGFSYRRSCREGVC 58
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSK-PTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 177
GS MNI G N +AC+ P+ K ++ PLP + VI+DLVVD++ FY+QY+ ++P+L
Sbjct: 59 GSDGMNINGKNGLACITPLSAVVKKNKLVVRPLPGLPVIRDLVVDMSIFYKQYEKVKPFL 118
Query: 178 KTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
+ N P E QSP +R+KLDGLYECILCACC+TSCPS+WWNP+++LGPAALL AYR+
Sbjct: 119 Q-NDTPAPAIERLQSPEEREKLDGLYECILCACCSTSCPSFWWNPDKFLGPAALLQAYRF 177
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQ 294
+ DSRD T ERL +L +D ++RCR I NC CPKGL+P AI ++ +ML Q
Sbjct: 178 LADSRDTKTSERLASL-DDPFSVFRCRGIMNCVNVCPKGLNPTKAIGHIR--NMLLQ 231
>UNIPROTKB|Q9KQB2 [details] [associations]
symbol:VC_2088 "Succinate dehydrogenase, iron-sulfur
protein" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0000104 "succinate dehydrogenase activity"
evidence=ISS] [GO:0006099 "tricarboxylic acid cycle" evidence=ISS]
[GO:0009055 "electron carrier activity" evidence=ISS] [GO:0045282
"plasma membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 EMBL:AE003852
GenomeReviews:AE003852_GR GO:GO:0006099 GO:GO:0051536
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 GO:GO:0045282 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP KO:K00240 ProtClustDB:PRK05950
HSSP:P07014 PIR:F82118 RefSeq:NP_231720.1 ProteinModelPortal:Q9KQB2
SMR:Q9KQB2 DNASU:2613344 GeneID:2613344 KEGG:vch:VC2088
PATRIC:20083207 Uniprot:Q9KQB2
Length = 236
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 115/232 (49%), Positives = 160/232 (68%)
Query: 59 MK-EFRIYRWNPDRPDSKPFLQSYHVDLSECGPM-VLDALQKIKAETDSSLSYRRSCREG 116
MK F +YR+NPD D+KP+++ Y +++ E M VLDAL +K E D S+++RRSCREG
Sbjct: 1 MKLNFSLYRYNPD-VDNKPYMKDYILEVEEGSDMMVLDALILLK-EQDPSIAFRRSCREG 58
Query: 117 ICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 176
+CGS +N+ G N +AC+ P+ +I PLP + V++DL+VD+T FY Y ++P+
Sbjct: 59 VCGSDGLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPF 118
Query: 177 LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
L + RE QSP +R LDGLYECI+CACCTTSCPS+WWNP++++GPA LL AYR
Sbjct: 119 LIADDALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYR 178
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
W+ DSRD T+ERL L +D ++RC I NC + CPKGL+P AI +K+
Sbjct: 179 WLIDSRDTATDERLSNL-DDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKS 229
>TIGR_CMR|VC_2088 [details] [associations]
symbol:VC_2088 "succinate dehydrogenase, iron-sulfur
protein" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006099 GO:GO:0051536
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 GO:GO:0045282 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP KO:K00240 ProtClustDB:PRK05950
HSSP:P07014 PIR:F82118 RefSeq:NP_231720.1 ProteinModelPortal:Q9KQB2
SMR:Q9KQB2 DNASU:2613344 GeneID:2613344 KEGG:vch:VC2088
PATRIC:20083207 Uniprot:Q9KQB2
Length = 236
Score = 629 (226.5 bits), Expect = 1.6e-61, P = 1.6e-61
Identities = 115/232 (49%), Positives = 160/232 (68%)
Query: 59 MK-EFRIYRWNPDRPDSKPFLQSYHVDLSECGPM-VLDALQKIKAETDSSLSYRRSCREG 116
MK F +YR+NPD D+KP+++ Y +++ E M VLDAL +K E D S+++RRSCREG
Sbjct: 1 MKLNFSLYRYNPD-VDNKPYMKDYILEVEEGSDMMVLDALILLK-EQDPSIAFRRSCREG 58
Query: 117 ICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 176
+CGS +N+ G N +AC+ P+ +I PLP + V++DL+VD+T FY Y ++P+
Sbjct: 59 VCGSDGLNMNGKNGLACITPLSALKGDKIVIRPLPGLPVVRDLIVDMTQFYDNYAKVKPF 118
Query: 177 LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
L + RE QSP +R LDGLYECI+CACCTTSCPS+WWNP++++GPA LL AYR
Sbjct: 119 LIADDALPPSRENLQSPEERAHLDGLYECIMCACCTTSCPSFWWNPDKFIGPAGLLAAYR 178
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
W+ DSRD T+ERL L +D ++RC I NC + CPKGL+P AI +K+
Sbjct: 179 WLIDSRDTATDERLSNL-DDAFSVFRCHGIMNCVSVCPKGLNPTKAIGHIKS 229
>UNIPROTKB|P07014 [details] [associations]
symbol:sdhB "succinate dehydrogenase iron-sulfur protein"
species:83333 "Escherichia coli K-12" [GO:0022900 "electron
transport chain" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0051539 "4 iron, 4 sulfur cluster binding" evidence=IEA;IMP]
[GO:0051538 "3 iron, 4 sulfur cluster binding" evidence=IEA;IDA]
[GO:0051537 "2 iron, 2 sulfur cluster binding" evidence=IEA;IMP]
[GO:0051536 "iron-sulfur cluster binding" evidence=IDA] [GO:0016491
"oxidoreductase activity" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009055 "electron carrier activity"
evidence=IEA;IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0006099 "tricarboxylic acid cycle" evidence=IEA] [GO:0009060
"aerobic respiration" evidence=IEP] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 UniPathway:UPA00223
InterPro:IPR017900 Prosite:PS00198 GO:GO:0005886 GO:GO:0009055
EMBL:U00096 EMBL:AP009048 GenomeReviews:AP009048_GR
GenomeReviews:U00096_GR GO:GO:0046872 GO:GO:0006099 GO:GO:0051539
GO:GO:0022900 GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 GO:GO:0009060
Gene3D:1.10.1060.10 GO:GO:0000104 EMBL:J01619 EMBL:X01070 PDB:1NEK
PDB:1NEN PDB:2ACZ PDB:2AD0 PDB:2WDQ PDB:2WDR PDB:2WDV PDB:2WP9
PDB:2WS3 PDB:2WU2 PDB:2WU5 PDBsum:1NEK PDBsum:1NEN PDBsum:2ACZ
PDBsum:2AD0 PDBsum:2WDQ PDBsum:2WDR PDBsum:2WDV PDBsum:2WP9
PDBsum:2WS3 PDBsum:2WU2 PDBsum:2WU5 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 OMA:NCSRTCP
KO:K00240 ProtClustDB:PRK05950 EMBL:X00661 PIR:A28837
RefSeq:NP_415252.1 RefSeq:YP_489004.1 ProteinModelPortal:P07014
SMR:P07014 DIP:DIP-10836N IntAct:P07014 PRIDE:P07014
EnsemblBacteria:EBESCT00000004560 EnsemblBacteria:EBESCT00000004561
EnsemblBacteria:EBESCT00000017526 GeneID:12932956 GeneID:945300
KEGG:ecj:Y75_p0704 KEGG:eco:b0724 PATRIC:32116643 EchoBASE:EB0925
EcoGene:EG10932 BioCyc:EcoCyc:SDH-FE-S
BioCyc:ECOL316407:JW0714-MONOMER BioCyc:MetaCyc:SDH-FE-S
EvolutionaryTrace:P07014 Genevestigator:P07014 Uniprot:P07014
Length = 238
Score = 625 (225.1 bits), Expect = 4.3e-61, P = 4.3e-61
Identities = 123/237 (51%), Positives = 163/237 (68%)
Query: 61 EFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVL-DALQKIKAETDSSLSYRRSCREGICG 119
EF IYR+NPD D+ P +Q Y ++ E M+L DAL ++K E D SLS+RRSCREG+CG
Sbjct: 4 EFSIYRYNPDVDDA-PRMQDYTLEADEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCG 61
Query: 120 SCAMNIGGTNTVACLKPIDG--DTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 177
S +N+ G N +AC+ PI K +I PLP + VI+DLVVD+ FY QY+ I+P+L
Sbjct: 62 SDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Query: 178 KTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
N RE+ Q P R+KLDGLYECILCACC+TSCPS+WWNP++++GPA LL AYR+
Sbjct: 122 LNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRF 181
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQ 294
+ DSRD T+ RL L+ D ++RC +I NC + CPKGL+P AI +K+ ML Q
Sbjct: 182 LIDSRDTETDSRLDGLS-DAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKS--MLLQ 235
>TIGR_CMR|CBU_1400 [details] [associations]
symbol:CBU_1400 "succinate dehydrogenase, iron-sulfur
protein" species:227377 "Coxiella burnetii RSA 493" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] [GO:0045282 "plasma membrane
succinate dehydrogenase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS51379 UniPathway:UPA00223 InterPro:IPR017900
Prosite:PS00198 GO:GO:0009055 GO:GO:0046872 GO:GO:0006099
GO:GO:0051539 GO:GO:0022900 EMBL:AE016828 GenomeReviews:AE016828_GR
GO:GO:0051538 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 EMBL:L33409
eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:NCSRTCP EMBL:X77919 PIR:S42873
RefSeq:NP_820385.1 ProteinModelPortal:P51053 SMR:P51053
PRIDE:P51053 GeneID:1209306 KEGG:cbu:CBU_1400 PATRIC:17931557
KO:K00240 ProtClustDB:PRK05950 BioCyc:CBUR227377:GJ7S-1388-MONOMER
Uniprot:P51053
Length = 235
Score = 597 (215.2 bits), Expect = 4.0e-58, P = 4.0e-58
Identities = 112/235 (47%), Positives = 161/235 (68%)
Query: 62 FRIYRWNPDRPDSKPFLQSYHVDLSEC-GPMVLDALQKIKAETDSSLSYRRSCREGICGS 120
F I R+NP+ D KP++Q + +D+S G M+L+AL+ ++ E + RRSC EG+CGS
Sbjct: 3 FSIMRFNPET-DKKPYMQDFELDVSAIQGKMLLNALEALR-EKHPDIGLRRSCAEGVCGS 60
Query: 121 CAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTN 180
MNI G N +AC+ + D ++ PLP +I+DL+VD+ FY QYK ++P+L +
Sbjct: 61 DGMNINGKNALACVTQLK-DLPDRVVVRPLPGFPIIRDLIVDMEQFYAQYKKVKPYLLND 119
Query: 181 M-VPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWIC 239
P+ +E QSP +R KLDGLYECILCACC++SCPSYWWNP++++GPA LL +YR+I
Sbjct: 120 QEAPQ--KERLQSPEERAKLDGLYECILCACCSSSCPSYWWNPDKFIGPAGLLWSYRFIA 177
Query: 240 DSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQ 294
DSRD +ERL A+ +D ++RCR I +C CPK L+PA AI K++T+ ML +
Sbjct: 178 DSRDSKEKERLDAM-KDPYSVFRCRTIMDCATVCPKNLNPAKAIRKIRTE-MLQE 230
>UNIPROTKB|O53371 [details] [associations]
symbol:sdhB "Succinate dehydrogenase and fumarate reductase
iron-sulfur protein" species:83332 "Mycobacterium tuberculosis
H37Rv" [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS51379 InterPro:IPR017900
Prosite:PS00198 GO:GO:0005886 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0009055 GO:GO:0016491 GO:GO:0006099
GO:GO:0051536 EMBL:BX842582 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
ProtClustDB:PRK05950 OMA:LIVDMEP HSSP:P07014 EMBL:CP003248
PIR:F70843 RefSeq:NP_217836.1 RefSeq:NP_337948.1
RefSeq:YP_006516798.1 SMR:O53371 EnsemblBacteria:EBMYCT00000002372
EnsemblBacteria:EBMYCT00000071457 GeneID:13318144 GeneID:887562
GeneID:926326 KEGG:mtc:MT3420 KEGG:mtu:Rv3319 KEGG:mtv:RVBD_3319
PATRIC:18129270 TubercuList:Rv3319 Uniprot:O53371
Length = 263
Score = 458 (166.3 bits), Expect = 2.2e-43, P = 2.2e-43
Identities = 102/245 (41%), Positives = 143/245 (58%)
Query: 58 VMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPM--VLDALQKIKAETDSSLSYRRSCRE 115
VM +I R+NPD PD+ + C P +L+ L IK D +L++RRSC
Sbjct: 22 VMVTVKIARFNPDDPDAFAATGGWQSFRVPCLPSDRLLNLLIYIKGYLDGTLTFRRSCAH 81
Query: 116 GICGSCAMNIGGTNTVAC------LKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQ 169
G+CGS AM I G N +AC L P S + P+ + V KDLVVD+ F+
Sbjct: 82 GVCGSDAMRINGVNRLACKVLMRDLLPKKKGKSLTVTVEPIRGLPVEKDLVVDMEPFFDA 141
Query: 170 YKSIEPWLKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPA 229
Y++I+P+L T+ P RE QSP DR + D +CILCACCTTSCP +W + Y GPA
Sbjct: 142 YRAIKPYLITSGNPPT-RERIQSPTDRARYDDTTKCILCACCTTSCPVFW-HEGSYFGPA 199
Query: 230 ALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTK 289
A+++A+R+I DSRDE ERL L E + ++RCR NCT +CP+G++ AI ++K
Sbjct: 200 AIVNAHRFIFDSRDEAAAERLDILNEVDG-VWRCRTTFNCTESCPRGIEVTKAIQEVKRA 258
Query: 290 HMLSQ 294
M ++
Sbjct: 259 LMFTR 263
>TIGR_CMR|CHY_1370 [details] [associations]
symbol:CHY_1370 "fumarate reductase, iron-sulfur subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0016491 GO:GO:0006099
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 eggNOG:COG0479 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 ProtClustDB:PRK05950 KO:K00245
RefSeq:YP_360202.1 ProteinModelPortal:Q3ACD2 STRING:Q3ACD2
GeneID:3727625 KEGG:chy:CHY_1370 PATRIC:21275873 OMA:NLNPARA
BioCyc:CHYD246194:GJCN-1369-MONOMER Uniprot:Q3ACD2
Length = 263
Score = 384 (140.2 bits), Expect = 1.5e-35, P = 1.5e-35
Identities = 89/234 (38%), Positives = 132/234 (56%)
Query: 59 MK-EFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGI 117
MK F+I+R++P + D +P+ Q Y D+ E G VLD L IK D++L++R SCR GI
Sbjct: 1 MKVRFKIWRYDPAK-DVQPYFQDYTFDVKE-GMTVLDCLYYIKENIDATLAFRASCRMGI 58
Query: 118 CGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 177
CGSCAM I +AC + I PLP+ IKDLV DLT ++++K+++P++
Sbjct: 59 CGSCAMYINKKPRLACETQALSLGTDVIEIAPLPNYKNIKDLVPDLTPLFEKHKNVKPYV 118
Query: 178 ----KTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLH 233
+ + G EY Q+PA+ ++ CI C C +CP+ P+ + GP AL
Sbjct: 119 IPENEQEFINPTG-EYSQTPAELEEYLQFAYCIKCGACLAACPTVGTTPD-FPGPQALAQ 176
Query: 234 AYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
AYR+ D+RD +ER + ++ + L+RC C CPKG+DPA AI K
Sbjct: 177 AYRYNADNRDFGEKER-KVQVDNPKGLWRCHMAGACAEACPKGVDPALAIQLFK 229
>UNIPROTKB|Q9KNS4 [details] [associations]
symbol:VC_2657 "Fumarate reductase, iron-sulfur protein"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0009061 "anaerobic respiration" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006099
GO:GO:0009061 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00245 ProtClustDB:PRK12385 PIR:G82050
RefSeq:NP_232285.1 HSSP:P00364 ProteinModelPortal:Q9KNS4
DNASU:2615674 GeneID:2615674 KEGG:vch:VC2657 PATRIC:20084334
OMA:EKDAEPY Uniprot:Q9KNS4
Length = 252
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 85/237 (35%), Positives = 129/237 (54%)
Query: 64 IYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAM 123
I R++P D++P +Q + V E VLDA+ +K D LSYR SCR ICGSC +
Sbjct: 11 ILRYDPAN-DAEPHMQRFEVPFDET-MSVLDAIGYVKDHLDKDLSYRWSCRMAICGSCGI 68
Query: 124 NIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTN-MV 182
+ G +AC K D + I PL + + KDL+VD+T F ++ ++I+P++ N
Sbjct: 69 MVNGVPKLAC-KSFLRDYPEGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPYIIGNDRK 127
Query: 183 PKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSR 242
P+DG Q+P + CI C C +CP + NPE +LGPAAL A+R+ DSR
Sbjct: 128 PEDGTNL-QTPEQMARYKQFAGCINCGLCYAACPQFGLNPE-FLGPAALTLAHRYNLDSR 185
Query: 243 DELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQPMEMV 299
D ER++ + D + C + C+ CPK +DPA A+++ K + L + M+
Sbjct: 186 DNGKAERMKLINGDNGA-WGCTFVGYCSEVCPKHVDPAAAVNQGKVESSLDFVIAML 241
>TIGR_CMR|VC_2657 [details] [associations]
symbol:VC_2657 "fumarate reductase, iron-sulfur protein"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0006099 GO:GO:0009061
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00245 ProtClustDB:PRK12385 PIR:G82050
RefSeq:NP_232285.1 HSSP:P00364 ProteinModelPortal:Q9KNS4
DNASU:2615674 GeneID:2615674 KEGG:vch:VC2657 PATRIC:20084334
OMA:EKDAEPY Uniprot:Q9KNS4
Length = 252
Score = 366 (133.9 bits), Expect = 1.2e-33, P = 1.2e-33
Identities = 85/237 (35%), Positives = 129/237 (54%)
Query: 64 IYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAM 123
I R++P D++P +Q + V E VLDA+ +K D LSYR SCR ICGSC +
Sbjct: 11 ILRYDPAN-DAEPHMQRFEVPFDET-MSVLDAIGYVKDHLDKDLSYRWSCRMAICGSCGI 68
Query: 124 NIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTN-MV 182
+ G +AC K D + I PL + + KDL+VD+T F ++ ++I+P++ N
Sbjct: 69 MVNGVPKLAC-KSFLRDYPEGVKIEPLANFPIEKDLIVDMTPFIERLEAIKPYIIGNDRK 127
Query: 183 PKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSR 242
P+DG Q+P + CI C C +CP + NPE +LGPAAL A+R+ DSR
Sbjct: 128 PEDGTNL-QTPEQMARYKQFAGCINCGLCYAACPQFGLNPE-FLGPAALTLAHRYNLDSR 185
Query: 243 DELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQPMEMV 299
D ER++ + D + C + C+ CPK +DPA A+++ K + L + M+
Sbjct: 186 DNGKAERMKLINGDNGA-WGCTFVGYCSEVCPKHVDPAAAVNQGKVESSLDFVIAML 241
>TIGR_CMR|CHY_0064 [details] [associations]
symbol:CHY_0064 "fumarate reductase, iron-sulfur subunit"
species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0006099 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00245
RefSeq:YP_358936.1 ProteinModelPortal:Q3AFZ8 STRING:Q3AFZ8
GeneID:3727128 KEGG:chy:CHY_0064 PATRIC:21273325 OMA:GCCASEC
ProtClustDB:CLSK2772298 BioCyc:CHYD246194:GJCN-64-MONOMER
Uniprot:Q3AFZ8
Length = 317
Score = 313 (115.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 76/230 (33%), Positives = 118/230 (51%)
Query: 62 FRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSC 121
F+I R++ + K ++Q Y G +L AL IK D +L++ SCR +CG+C
Sbjct: 6 FKIRRFDGE----KSWVQEYQFPYQP-GKTILWALSYIKESIDPTLTFTASCRHAVCGAC 60
Query: 122 AMNIGGTNTVACL----KPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 177
A+ + G +AC K +D + +I PL + VI+DLVVD ++ ++PWL
Sbjct: 61 AVRVNGQAVLACETLLDKMLDRWETDTLLIEPLQNFKVIRDLVVDWETKVERLARVKPWL 120
Query: 178 KTNMVPKD--GREY--RQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLH 233
+P+D +E RQ+P + KK++ +CILC CC + C N ++L P
Sbjct: 121 ----IPRDEFSKETGCRQTPEEFKKINKNSDCILCGCCASECNKLSNNDSDFLEPFIFSK 176
Query: 234 AYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAI 283
A ++I DSRD+ R+ T ++C + C CPKGL PAD I
Sbjct: 177 AQKFIADSRDKDPLSRIS--TAINNGAWKCMHCQECVTKCPKGLSPADDI 224
Score = 43 (20.2 bits), Expect = 6.1e-31, Sum P(2) = 6.1e-31
Identities = 6/16 (37%), Positives = 14/16 (87%)
Query: 285 KMKTKHMLSQPMEMVE 300
K++ KH+L++P++ +E
Sbjct: 288 KLRLKHVLAKPIKEIE 303
>UNIPROTKB|P0AC47 [details] [associations]
symbol:frdB "fumarate reductase iron-sulfur protein"
species:83333 "Escherichia coli K-12" [GO:0016020 "membrane"
evidence=IDA] [GO:0022900 "electron transport chain" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0009296
"flagellum assembly" evidence=IMP] [GO:0001539 "ciliary or
flagellar motility" evidence=IMP] [GO:0051539 "4 iron, 4 sulfur
cluster binding" evidence=IEA;IDA] [GO:0051538 "3 iron, 4 sulfur
cluster binding" evidence=IEA;IDA] [GO:0051537 "2 iron, 2 sulfur
cluster binding" evidence=IEA;IDA] [GO:0016491 "oxidoreductase
activity" evidence=IEA] [GO:0006099 "tricarboxylic acid cycle"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0000104 "succinate dehydrogenase activity" evidence=IEA]
[GO:0009061 "anaerobic respiration" evidence=IMP] [GO:0006113
"fermentation" evidence=IMP] [GO:0009055 "electron carrier
activity" evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51085 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0005737 GO:GO:0016020 GO:GO:0009055 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
GO:GO:0006099 GO:GO:0051539 GO:GO:0022900 GO:GO:0006113
GO:GO:0009061 GO:GO:0051538 EMBL:U14003 GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 EMBL:J01611 EMBL:V00277 GO:GO:0009296
GO:GO:0000104 GO:GO:0001539 eggNOG:COG0479 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 PDB:1KF6 PDB:1KFY PDB:1L0V
PDB:2B76 PDB:3CIR PDB:3P4P PDB:3P4Q PDB:3P4R PDB:3P4S PDBsum:1KF6
PDBsum:1KFY PDBsum:1L0V PDBsum:2B76 PDBsum:3CIR PDBsum:3P4P
PDBsum:3P4Q PDBsum:3P4R PDBsum:3P4S PIR:A00377 RefSeq:NP_418577.1
RefSeq:YP_492298.1 ProteinModelPortal:P0AC47 SMR:P0AC47
IntAct:P0AC47 PRIDE:P0AC47 EnsemblBacteria:EBESCT00000004418
EnsemblBacteria:EBESCT00000017881 GeneID:12933707 GeneID:948666
KEGG:ecj:Y75_p4042 KEGG:eco:b4153 PATRIC:32123879 EchoBASE:EB0327
EcoGene:EG10331 KO:K00245 OMA:NPRTPDQ ProtClustDB:PRK12385
BioCyc:EcoCyc:FUM-FE-S BioCyc:ECOL316407:JW4114-MONOMER
BioCyc:MetaCyc:FUM-FE-S EvolutionaryTrace:P0AC47
Genevestigator:P0AC47 Uniprot:P0AC47
Length = 244
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 82/233 (35%), Positives = 121/233 (51%)
Query: 59 MKEFRI--YRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREG 116
MK +I R+NP+ D+ P Y V + +LDAL IK LSYR SCR
Sbjct: 4 MKNLKIEVVRYNPE-VDTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMA 61
Query: 117 ICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 176
ICGSC M + +AC K D + + L + + +DLVVD+T+F + ++I+P+
Sbjct: 62 ICGSCGMMVNNVPKLAC-KTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120
Query: 177 LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
+ N D Q+PA K CI C C +CP + NPE ++GPAA+ A+R
Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNPE-FIGPAAITLAHR 179
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTK 289
+ DSRD +ER+ L + ++ C + C+ CPK +DPA AI + K +
Sbjct: 180 YNEDSRDHGKKERMAQLNS-QNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVE 231
>TIGR_CMR|SO_0399 [details] [associations]
symbol:SO_0399 "fumarate reductase iron-sulfur protein"
species:211586 "Shewanella oneidensis MR-1" [GO:0000104 "succinate
dehydrogenase activity" evidence=ISS] [GO:0006099 "tricarboxylic
acid cycle" evidence=ISS] [GO:0009061 "anaerobic respiration"
evidence=ISS] InterPro:IPR001041 InterPro:IPR004489
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS00197 PROSITE:PS51379 GO:GO:0009055 GO:GO:0006099
EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 HOGENOM:HOG000160590
SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00245 HSSP:P17596
ProtClustDB:PRK13552 RefSeq:NP_716037.1 ProteinModelPortal:Q8EJR3
SMR:Q8EJR3 GeneID:1168276 KEGG:son:SO_0399 PATRIC:23520501
OMA:CRTLTSK Uniprot:Q8EJR3
Length = 243
Score = 285 (105.4 bits), Expect = 4.6e-25, P = 4.6e-25
Identities = 73/233 (31%), Positives = 115/233 (49%)
Query: 62 FRIYRWNPDRPDSKPFLQSYHVDLSEC-GPMVLDALQKIKAETDSSLSYRRSCREGICGS 120
F I+R++P P+ KP + Y L+E G V AL K++ E D+SL + CR GICGS
Sbjct: 9 FNIFRYDPQEPNDKPKMVRYQ--LTETPGMTVFIALNKLREEQDTSLQFDFVCRAGICGS 66
Query: 121 CAMNIGGTNTVACLKPIDGDTSKPTI-ITPLPHMFVIKDLVVDLTNFYQQY-KSIEPWL- 177
CAM I G T+AC + + K I + PLP +I DL V+ F ++ + ++ WL
Sbjct: 67 CAMVINGFPTLAC-RTLTAKYPKGEITLMPLPGFELIGDLSVNTGKFMRELAERLKLWLH 125
Query: 178 -KTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
K N + E +P + +L L C+ C C ++C + E ++G ++ R
Sbjct: 126 PKANDISIHRLEEPMAPEEAARLYELERCVECGVCVSACATKQMR-ETFVGAVGMMKIAR 184
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTK 289
+ DSRD T E + ++ ++ C + C CPK L I ++ K
Sbjct: 185 FELDSRDARTAEDFYHVIGNQDGVFGCMTLLGCQDNCPKDLPHMQQIAYLRRK 237
>TIGR_CMR|CJE_0459 [details] [associations]
symbol:CJE_0459 "fumarate reductase, iron-sulfur protein
subunit" species:195099 "Campylobacter jejuni RM1221" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] [GO:0045284 "plasma membrane fumarate
reductase complex" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR006058 InterPro:IPR009051
InterPro:IPR012285 InterPro:IPR017896 InterPro:IPR025192
Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
PROSITE:PS51379 GO:GO:0009055 GO:GO:0006099 EMBL:CP000025
GenomeReviews:CP000025_GR GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0000104 eggNOG:COG0479 HOGENOM:HOG000160590 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 OMA:CRTLTKD KO:K00245 PIR:H81384
RefSeq:YP_178478.1 ProteinModelPortal:Q5HW57 SMR:Q5HW57
STRING:Q5HW57 GeneID:3231221 KEGG:cjr:CJE0459 PATRIC:20042618
ProtClustDB:PRK13552 BioCyc:CJEJ195099:GJC0-464-MONOMER
Uniprot:Q5HW57
Length = 241
Score = 246 (91.7 bits), Expect = 6.3e-21, P = 6.3e-21
Identities = 70/236 (29%), Positives = 108/236 (45%)
Query: 63 RIYRWNPDRPDSKPFLQSYHVDLSECGPM-VLDALQKIKAETDSSLSYRRSCREGICGSC 121
+ +++NP SKP +Y +L E M V L I+ + D+ LS+ CR GICGSC
Sbjct: 8 KAFKYNPLSKISKPHFVTY--ELEETPFMTVFVCLTLIREKMDADLSFDFVCRAGICGSC 65
Query: 122 AMNIGGTNTVACLKPIDGDTSKPTI-ITPLPHMFVIKDLVVDLTNFYQQY-KSIEPWLKT 179
AM I G +AC K + D I + P+P IKDL V+ +++ K +E W+
Sbjct: 66 AMMINGVPKLAC-KTLTKDYPDGVIELMPMPAFRHIKDLSVNTGEWFEDMCKRVESWVHN 124
Query: 180 NMVPKDGR-EYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
+ E R P + L CI C C SC + P ++ LL R++
Sbjct: 125 EKETDISKLEERIEPEVADETFELDRCIECGICVASCATKLMRPN-FIAATGLLRTARYL 183
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQ 294
D D + E L D+ ++ C ++ C CPK L I M+ + +++Q
Sbjct: 184 QDPHDHRSVEDFYELVGDDDGVFGCMSLLACEDNCPKELPLQSKIAYMR-RQLVAQ 238
>TIGR_CMR|CJE_0489 [details] [associations]
symbol:CJE_0489 "succinate dehydrogenase, iron-sulfur
protein subunit" species:195099 "Campylobacter jejuni RM1221"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009055
"electron carrier activity" evidence=ISS] [GO:0045282 "plasma
membrane succinate dehydrogenase complex" evidence=ISS]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0006099 EMBL:CP000025 GenomeReviews:CP000025_GR GO:GO:0051537
Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 eggNOG:COG0479
HOGENOM:HOG000160590 OMA:WSADSRD SUPFAM:SSF46548 TIGRFAMs:TIGR00384
KO:K00240 RefSeq:YP_178508.1 ProteinModelPortal:Q5HW27
STRING:Q5HW27 GeneID:3231250 KEGG:cjr:CJE0489 PATRIC:20042682
ProtClustDB:CLSK878790 BioCyc:CJEJ195099:GJC0-499-MONOMER
Uniprot:Q5HW27
Length = 321
Score = 240 (89.5 bits), Expect = 2.7e-20, P = 2.7e-20
Identities = 67/229 (29%), Positives = 105/229 (45%)
Query: 70 DRPDSKP-FLQSYHVDLSEC-GPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGG 127
DR + K + QSY +D + G +L L IK D +L++ SC+ ICG+CA+ + G
Sbjct: 6 DRFNGKEKYEQSYDIDDKDIQGKTLLSLLLFIKKTKDITLNFTASCQSAICGACAVRVNG 65
Query: 128 TNTVAC-------LKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL--K 178
+ +AC LK D +S I+PL + VI DL+VD + + I P + K
Sbjct: 66 HSYLACDTKMQDLLKEYDNPSS--IRISPLGNFRVISDLIVDWEPSIENLRKIRPAMVAK 123
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
+ G + Q DR + ++CILC C + C + +Y+ P HA+R
Sbjct: 124 NEFSAEKGCKQSQEEFDR--ISKQWDCILCGSCASECNKLEADSSDYMQPFVFTHAWRAA 181
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
DSR + + L L+ C + C CPKG+ I ++
Sbjct: 182 ADSRGK--DPMLHVKPSVMNGLWLCVHCQECADRCPKGISSVSDIANLR 228
>TIGR_CMR|BA_4753 [details] [associations]
symbol:BA_4753 "succinate dehydrogenase, iron-sulfur
protein" species:198094 "Bacillus anthracis str. Ames" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009055 "electron
carrier activity" evidence=ISS] InterPro:IPR001041
InterPro:IPR004489 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
EMBL:AE016879 EMBL:AE017334 EMBL:AE017225 GenomeReviews:AE016879_GR
GenomeReviews:AE017225_GR GenomeReviews:AE017334_GR GO:GO:0006099
GO:GO:0051536 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
TIGRFAMs:TIGR00384 KO:K00240 HSSP:P17596 RefSeq:NP_846959.1
RefSeq:YP_021401.1 RefSeq:YP_030659.1 ProteinModelPortal:Q81L78
DNASU:1083838 EnsemblBacteria:EBBACT00000012333
EnsemblBacteria:EBBACT00000014912 EnsemblBacteria:EBBACT00000024327
GeneID:1083838 GeneID:2815738 GeneID:2851658 KEGG:ban:BA_4753
KEGG:bar:GBAA_4753 KEGG:bat:BAS4412 HOGENOM:HOG000160588
OMA:EPMSTFP ProtClustDB:PRK08640
BioCyc:BANT260799:GJAJ-4469-MONOMER
BioCyc:BANT261594:GJ7F-4617-MONOMER Uniprot:Q81L78
Length = 253
Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
Identities = 66/232 (28%), Positives = 108/232 (46%)
Query: 60 KEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAE-TDSS------LSYRRS 112
K R+ D PD++ F Q + + ++ AL +I+ DS +++ +
Sbjct: 4 KTIRLIITRQDGPDAQAFDQEFEIPYRP-NMNIISALMEIRRNPVDSKGNQTTPIAWDMN 62
Query: 113 CREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKS 172
C E +CG+C+M I G +C ID +P + P+ V++DL VD + + K
Sbjct: 63 CLEEVCGACSMVINGKPRQSCTALID-QLEQPIRLKPMKTFPVVRDLQVDRSRMFNALKR 121
Query: 173 IEPWLKTNMVPKDGREYRQSPADR---KKLDGLYE---CILCACCTTSCPSYWWNPEEYL 226
++ W +P DG Y P R KK YE C+ C C SCP+ + +++
Sbjct: 122 VKAW-----IPIDGT-YDLGPGPRMPEKKRQWAYELSKCMTCGVCLESCPNVN-SKSDFI 174
Query: 227 GPAALLHAYRWICDSRDELTE-ERLQALTEDERKLYRCRAIKNCTATCPKGL 277
GPA L A + E+ + +RL+A+ D L C +NC +CPKG+
Sbjct: 175 GPAPLSQARLFNSHPTGEMHKADRLRAIMGDGG-LANCGNSQNCVQSCPKGI 225
>UNIPROTKB|O53669 [details] [associations]
symbol:Rv0247c "PROBABLE SUCCINATE DEHYDROGENASE
[IRON-SULFUR SUBUNIT] (SUCCINIC DEHYDROGENASE)" species:83332
"Mycobacterium tuberculosis H37Rv" [GO:0005618 "cell wall"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
InterPro:IPR001041 InterPro:IPR004489 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
Pfam:PF00111 Pfam:PF13183 PROSITE:PS00197 PROSITE:PS51085
GO:GO:0005886 GO:GO:0005618 GenomeReviews:AE000516_GR
GenomeReviews:AL123456_GR GO:GO:0009055 GO:GO:0046872 GO:GO:0016491
EMBL:BX842572 GO:GO:0006099 GO:GO:0051537 Gene3D:3.10.20.30
InterPro:IPR012675 SUPFAM:SSF54292 Gene3D:1.10.1060.10
GO:GO:0000104 SUPFAM:SSF46548 TIGRFAMs:TIGR00384 KO:K00240
EMBL:CP003248 PIR:C70939 RefSeq:NP_214761.1 RefSeq:NP_334665.1
RefSeq:YP_006513571.1 HSSP:P17596 SMR:O53669
EnsemblBacteria:EBMYCT00000001424 EnsemblBacteria:EBMYCT00000069127
GeneID:13316234 GeneID:886677 GeneID:923168 KEGG:mtc:MT0261
KEGG:mtu:Rv0247c KEGG:mtv:RVBD_0247c PATRIC:18122287
TubercuList:Rv0247c HOGENOM:HOG000022233 OMA:YDPLVWL
ProtClustDB:PRK12386 Uniprot:O53669
Length = 248
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 62/228 (27%), Positives = 104/228 (45%)
Query: 67 WNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIG 126
W D +S L+ + V+++E G +VLD + +++ L+ R +C+ G CGSC+ I
Sbjct: 10 WRGD--ESCGELREFTVEVNE-GEVVLDVILRLQQTQTPDLAVRWNCKAGKCGSCSAEIN 66
Query: 127 GTNTVACLKPIDG-DTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVPKD 185
G + C+ + D + +TP+ VI+DLV D++ YQ+ + I + +
Sbjct: 67 GKPRLMCMTRMSTFDEDEIVTVTPMRTFPVIRDLVTDVSFNYQKAREIPSFAPPKELQPS 126
Query: 186 GREYRQSPADRKKLDGLYECILCACCTTSCP---SYWWNPEEYLGPAALLHAYRWICDSR 242
EYR + D + +CI C C C + N + + GP L+
Sbjct: 127 --EYRMAQVDVARSQEFRKCIECFLCQNVCHVVRDHEENKDAFAGPRFLMRIAELEMHPL 184
Query: 243 DELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPAD-AIHKMKTK 289
D + R QA ++E L C K CT CP+ + D A+ MK +
Sbjct: 185 DT-RDRRSQA--QEEHGLGYCNITKCCTEVCPENIKITDNALIPMKER 229
>UNIPROTKB|Q74DY7 [details] [associations]
symbol:frdB "Succinate dehydrogenase/fumarate reductase,
iron-sulfur protein" species:243231 "Geobacter sulfurreducens PCA"
[GO:0000104 "succinate dehydrogenase activity" evidence=ISS]
[GO:0006099 "tricarboxylic acid cycle" evidence=ISS] [GO:0009061
"anaerobic respiration" evidence=ISS] InterPro:IPR001041
InterPro:IPR006058 InterPro:IPR009051 InterPro:IPR012285
InterPro:IPR017896 InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183
PROSITE:PS00197 PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198
GO:GO:0009055 GO:GO:0006099 EMBL:AE017180 GenomeReviews:AE017180_GR
GO:GO:0009061 GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675
SUPFAM:SSF54292 Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548
KO:K00240 RefSeq:NP_952231.1 ProteinModelPortal:Q74DY7
GeneID:2686801 KEGG:gsu:GSU1178 PATRIC:22025128
HOGENOM:HOG000160589 OMA:INVKFIA ProtClustDB:PRK07570
BioCyc:GSUL243231:GH27-1164-MONOMER Uniprot:Q74DY7
Length = 253
Score = 122 (48.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 58/207 (28%), Positives = 80/207 (38%)
Query: 91 MVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGT------NTVACLKPI----DGD 140
M+ D +++ + +++ CREGICG C+ I G T C + +GD
Sbjct: 43 MLDDVNEELIKQGKDPIAFDHDCREGICGMCSQVINGIPHGGMDRTTVCQLHMRMFKNGD 102
Query: 141 TS--KPTIITPLPHMFVIKDLVVD---LTNFYQQ--YKSIEPWLKTNMVPKDGREYRQSP 193
+P P +IKDLVVD L Q Y S T V DG
Sbjct: 103 AIYIEPWRARAFP---IIKDLVVDRGALDTIIQAGGYTSAH----TGGVA-DGNALLIPK 154
Query: 194 ADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQAL 253
D ECI C C CP N L +A + + + E T R++A+
Sbjct: 155 DDADYAMDAAECIGCGACVAGCP----NGSAMLFTSAKVSQLAVLPQGKAEATR-RVKAM 209
Query: 254 TE--DERKLYRCRAIKNCTATCPKGLD 278
TE E C C A CPKG++
Sbjct: 210 TETLQECGFGNCTNHYECQAACPKGIN 236
>TIGR_CMR|GSU_1178 [details] [associations]
symbol:GSU_1178 "fumarate reductase, iron-sulfur protein"
species:243231 "Geobacter sulfurreducens PCA" [GO:0000104
"succinate dehydrogenase activity" evidence=ISS] [GO:0006099
"tricarboxylic acid cycle" evidence=ISS] [GO:0009061 "anaerobic
respiration" evidence=ISS] InterPro:IPR001041 InterPro:IPR006058
InterPro:IPR009051 InterPro:IPR012285 InterPro:IPR017896
InterPro:IPR025192 Pfam:PF13085 Pfam:PF13183 PROSITE:PS00197
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0009055
GO:GO:0006099 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0009061
GO:GO:0051537 Gene3D:3.10.20.30 InterPro:IPR012675 SUPFAM:SSF54292
Gene3D:1.10.1060.10 GO:GO:0000104 SUPFAM:SSF46548 KO:K00240
RefSeq:NP_952231.1 ProteinModelPortal:Q74DY7 GeneID:2686801
KEGG:gsu:GSU1178 PATRIC:22025128 HOGENOM:HOG000160589 OMA:INVKFIA
ProtClustDB:PRK07570 BioCyc:GSUL243231:GH27-1164-MONOMER
Uniprot:Q74DY7
Length = 253
Score = 122 (48.0 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 58/207 (28%), Positives = 80/207 (38%)
Query: 91 MVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGT------NTVACLKPI----DGD 140
M+ D +++ + +++ CREGICG C+ I G T C + +GD
Sbjct: 43 MLDDVNEELIKQGKDPIAFDHDCREGICGMCSQVINGIPHGGMDRTTVCQLHMRMFKNGD 102
Query: 141 TS--KPTIITPLPHMFVIKDLVVD---LTNFYQQ--YKSIEPWLKTNMVPKDGREYRQSP 193
+P P +IKDLVVD L Q Y S T V DG
Sbjct: 103 AIYIEPWRARAFP---IIKDLVVDRGALDTIIQAGGYTSAH----TGGVA-DGNALLIPK 154
Query: 194 ADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQAL 253
D ECI C C CP N L +A + + + E T R++A+
Sbjct: 155 DDADYAMDAAECIGCGACVAGCP----NGSAMLFTSAKVSQLAVLPQGKAEATR-RVKAM 209
Query: 254 TE--DERKLYRCRAIKNCTATCPKGLD 278
TE E C C A CPKG++
Sbjct: 210 TETLQECGFGNCTNHYECQAACPKGIN 236
>UNIPROTKB|Q4KEF9 [details] [associations]
symbol:glcF "Glycolate oxidase, iron-sulfur subunit"
species:220664 "Pseudomonas protegens Pf-5" [GO:0008891 "glycolate
oxidase activity" evidence=ISS] [GO:0009441 "glycolate metabolic
process" evidence=ISS] InterPro:IPR012285 InterPro:IPR017896
PROSITE:PS51379 InterPro:IPR017900 Prosite:PS00198 GO:GO:0051536
EMBL:CP000076 GenomeReviews:CP000076_GR Gene3D:1.10.1060.10
GO:GO:0008891 eggNOG:COG0247 HOGENOM:HOG000256469 KO:K11473
ProtClustDB:PRK11274 InterPro:IPR004017 InterPro:IPR012257
Pfam:PF02754 PIRSF:PIRSF000139 GO:GO:0009441 RefSeq:YP_259374.1
ProteinModelPortal:Q4KEF9 STRING:Q4KEF9 GeneID:3475904
KEGG:pfl:PFL_2267 PATRIC:19873797 OMA:FTISETC
BioCyc:PFLU220664:GIX8-2278-MONOMER Uniprot:Q4KEF9
Length = 405
Score = 113 (44.8 bits), Expect = 0.00087, P = 0.00087
Identities = 27/93 (29%), Positives = 45/93 (48%)
Query: 188 EYRQSP--ADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDEL 245
E RQ P A+ +++ L C+ C C +CP+Y +E GP ++ + +
Sbjct: 8 EARQLPRAAEAERI--LRSCVHCGFCNATCPTYQLQGDELDGPRGRIYLIKQVL------ 59
Query: 246 TEERLQALTEDERKLYRCRAIKNCTATCPKGLD 278
E A ++ L RC + +NC +TCP G+D
Sbjct: 60 --EGAPATAHAQQHLDRCLSCRNCESTCPSGVD 90
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.135 0.423 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 302 302 0.00097 115 3 11 22 0.38 34
33 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 55
No. of states in DFA: 611 (65 KB)
Total size of DFA: 235 KB (2128 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.89u 0.08s 24.97t Elapsed: 00:00:01
Total cpu time: 24.90u 0.08s 24.98t Elapsed: 00:00:01
Start: Fri May 10 10:48:14 2013 End: Fri May 10 10:48:15 2013