BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045926
(302 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FJP9|DHSB3_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 3,
mitochondrial OS=Arabidopsis thaliana GN=SDH2-3 PE=2
SV=1
Length = 309
Score = 451 bits (1161), Expect = e-126, Method: Compositional matrix adjust.
Identities = 213/277 (76%), Positives = 240/277 (86%), Gaps = 3/277 (1%)
Query: 27 DFPVLEGHPAAQESAEVALESRVTVQDNV---KKVMKEFRIYRWNPDRPDSKPFLQSYHV 83
DFP+L GH AAQ+ ++ L+S+ ++ K+V KEF+IYRWNPD+P+SKPFLQS+ V
Sbjct: 31 DFPILNGHKAAQDLSKDTLKSQDITKEKEGQHKEVKKEFKIYRWNPDKPNSKPFLQSFFV 90
Query: 84 DLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTSK 143
DLS CGPMVLD LQKIKAE D+SLSYRRSCREGICGSC+MNI GTNTVACLKPI+ +TSK
Sbjct: 91 DLSSCGPMVLDVLQKIKAEDDASLSYRRSCREGICGSCSMNIDGTNTVACLKPINPNTSK 150
Query: 144 PTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVPKDGREYRQSPADRKKLDGLY 203
PTIITPLPHM+VIKDLVVDLTNFYQQYKS+EPWLKT PKDGRE+RQSP DRKKLDGLY
Sbjct: 151 PTIITPLPHMYVIKDLVVDLTNFYQQYKSMEPWLKTRKPPKDGREHRQSPKDRKKLDGLY 210
Query: 204 ECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRC 263
ECILCACCTTSCPSYWWNPEE+ GPAALL AYRWI DSRDE EERLQA+TE E K+YRC
Sbjct: 211 ECILCACCTTSCPSYWWNPEEFPGPAALLQAYRWISDSRDEYREERLQAITESETKVYRC 270
Query: 264 RAIKNCTATCPKGLDPADAIHKMKTKHMLSQPMEMVE 300
RAIKNCTATCPKGL+PA AI KMK+KH+LS P+ E
Sbjct: 271 RAIKNCTATCPKGLNPASAILKMKSKHLLSDPLVRTE 307
>sp|P21801|DHSB_YEAST Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SDH2 PE=1 SV=1
Length = 266
Score = 335 bits (859), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 154/229 (67%), Positives = 184/229 (80%), Gaps = 1/229 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F++YRWNPD P +KP LQSY VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 33 LKTFKVYRWNPDEPSAKPHLQSYQVDLNDCGPMVLDALLKIKDEQDSTLTFRRSCREGIC 92
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNIGG NT+AC+ ID + SK I PLPHMF++KDLV DLTNFYQQYKSI+P+L+
Sbjct: 93 GSCAMNIGGRNTLACICKIDQNESKQLKIYPLPHMFIVKDLVPDLTNFYQQYKSIQPYLQ 152
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
+ PKDG E QS DRKKLDGLYECILCACC+TSCPSYWWN E+YLGPA L+ AYRW+
Sbjct: 153 RSSFPKDGTEVLQSIEDRKKLDGLYECILCACCSTSCPSYWWNQEQYLGPAVLMQAYRWL 212
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
DSRD+ T+ R +A+ + LYRC I NCT TCPKGL+P AI ++K
Sbjct: 213 IDSRDQATKTR-KAMLNNSMSLYRCHTIMNCTRTCPKGLNPGLAIAEIK 260
>sp|Q6FWS8|DHSB_CANGA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SDH2 PE=3
SV=1
Length = 253
Score = 331 bits (849), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 153/231 (66%), Positives = 182/231 (78%), Gaps = 1/231 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F+IYRWNPD+P KP LQ Y VDL +CGPMVLDAL KIK E D++L++RRSCREGIC
Sbjct: 20 LKTFKIYRWNPDKPTEKPHLQEYKVDLEDCGPMVLDALLKIKNEQDATLTFRRSCREGIC 79
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNIGG NT+ACL ID D SK T I PLPHMF++KDLV DLT FYQQYKSI+P+L+
Sbjct: 80 GSCAMNIGGANTLACLCKIDQDESKTTKIYPLPHMFIVKDLVPDLTGFYQQYKSIQPYLQ 139
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
P DG+E QS DRKKLDGLYECILCACC+TSCPSYWWN EEYLGPA L+ AYRW+
Sbjct: 140 RTDYPADGKEVLQSIDDRKKLDGLYECILCACCSTSCPSYWWNQEEYLGPAVLMQAYRWL 199
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTK 289
DSRD+ T+ R + + ++ LYRC I NCT TCPKGL+P +I ++K +
Sbjct: 200 IDSRDQATKAR-RTMLQNSMSLYRCHTIMNCTRTCPKGLNPGRSIAEIKKQ 249
>sp|Q9YHT2|DHSB_CHICK Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Gallus gallus GN=SDHB PE=1 SV=1
Length = 290
Score = 327 bits (837), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 155/230 (67%), Positives = 183/230 (79%), Gaps = 2/230 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+P KP +Q+Y VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 49 IKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGIC 108
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC K ID D SK T I PLPHM+V+KDLV DL+NFY QYKSIEP+LK
Sbjct: 109 GSCAMNIAGGNTLACTKKIDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLK 168
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
K G+E Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 169 KKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 228
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 229 MIDSRDDYTEERLAQL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 277
>sp|Q8LB02|DHSB2_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 2,
mitochondrial OS=Arabidopsis thaliana GN=SDH2-2 PE=1
SV=2
Length = 280
Score = 326 bits (836), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 160/230 (69%), Positives = 178/230 (77%), Gaps = 4/230 (1%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F+IYRWNPD P KP LQ Y +DL +CGPMVLDAL KIK E D SL++RRSCREGIC
Sbjct: 48 LKTFQIYRWNPDNP-GKPELQDYKIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGIC 106
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G N +ACL I+ SK T ITPLPHMFVIKDLVVD+TNFY QYKSIEPWLK
Sbjct: 107 GSCAMNIDGCNGLACLTKIESG-SKETTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLK 165
Query: 179 -TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
N G+E QS DR KLDG+YECILCACC+TSCPSYWWNPE YLGPAALLHA RW
Sbjct: 166 RKNPASVPGKEILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRW 225
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
I DSRDE T+ERL+A+ +DE KLYRC I NC CPKGL+P I +K
Sbjct: 226 ISDSRDEYTKERLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIK 274
>sp|Q8LBZ7|DHSB1_ARATH Succinate dehydrogenase [ubiquinone] iron-sulfur subunit 1,
mitochondrial OS=Arabidopsis thaliana GN=SDH2-1 PE=1
SV=2
Length = 279
Score = 325 bits (834), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 167/279 (59%), Positives = 192/279 (68%), Gaps = 10/279 (3%)
Query: 14 VAGIFGRAEAKKQDFPVLEGH--PAAQESAEVALESRVTVQDNVKKVMKEFRIYRWNPDR 71
+G+ GR K PA S E++ + +K F+IYRWNPD
Sbjct: 2 ASGLIGRLVGTKPSKLATAARLIPARWTSTGAEAETKASSGGGRGSNLKTFQIYRWNPDN 61
Query: 72 PDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTV 131
P KP LQ+Y +DL +CGPMVLDAL KIK E D SL++RRSCREGICGSCAMNI G N +
Sbjct: 62 P-GKPELQNYQIDLKDCGPMVLDALIKIKNEMDPSLTFRRSCREGICGSCAMNIDGCNGL 120
Query: 132 ACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNM---VPKDGRE 188
ACL I + S+ T ITPLPHMFVIKDLVVD+TNFY QYKSIEPWLK VP +E
Sbjct: 121 ACLTKIQDEASE-TTITPLPHMFVIKDLVVDMTNFYNQYKSIEPWLKRKTPASVP--AKE 177
Query: 189 YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEE 248
QS DR KLDG+YECILCACC+TSCPSYWWNPE YLGPAALLHA RWI DSRDE T+E
Sbjct: 178 ILQSKKDRAKLDGMYECILCACCSTSCPSYWWNPESYLGPAALLHANRWISDSRDEYTKE 237
Query: 249 RLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
RL+A+ +DE KLYRC I NC CPKGL+P I +K
Sbjct: 238 RLEAI-DDEFKLYRCHTILNCARACPKGLNPGKQITHIK 275
>sp|Q70KF8|DHSB_UROFA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Uromyces fabae GN=SDH2 PE=3 SV=1
Length = 283
Score = 325 bits (834), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 152/229 (66%), Positives = 181/229 (79%), Gaps = 2/229 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+KEF IYRWNPD P KP LQ+Y +DL +CGPMVLDAL KIK E D +L++RRSCREGIC
Sbjct: 51 VKEFSIYRWNPDEPSKKPTLQTYSIDLKKCGPMVLDALIKIKNELDPTLTFRRSCREGIC 110
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+ACLK I+ +TS P I PLPHM++IKDLV D+T+FY+QYKSIEP+LK
Sbjct: 111 GSCAMNIDGVNTLACLKRINKETSAPVKIYPLPHMYIIKDLVPDMTHFYKQYKSIEPFLK 170
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
+ P G E+ QSP DRKKLDG+YECILCACC+TSCPSYWWN +EYLGPA L+ AYRW+
Sbjct: 171 NDNPPAQG-EFLQSPEDRKKLDGMYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYRWM 229
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
DSRD E+R + L ++ LYRC I NCT TCPKGL+PA AI +K
Sbjct: 230 ADSRDSYGEDRKEKL-QNTLSLYRCHTIFNCTKTCPKGLNPAKAISHIK 277
>sp|P21911|DHSB_SCHPO Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=sdh2 PE=3 SV=3
Length = 275
Score = 322 bits (826), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 151/229 (65%), Positives = 182/229 (79%), Gaps = 3/229 (1%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F IYRWNP++P+ KP LQ Y VDL++CGPMVLDAL KIK E D +L++RRSCREGIC
Sbjct: 44 LKTFEIYRWNPEKPEVKPKLQKYTVDLTKCGPMVLDALIKIKNEQDPTLTFRRSCREGIC 103
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G+NT+AC+ I D +KPT I PLPH F++KDLV DLT FY+QYKSIEPWL+
Sbjct: 104 GSCAMNINGSNTLACICNIKKD-NKPTKIYPLPHCFIVKDLVPDLTYFYKQYKSIEPWLQ 162
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
+ +PKD +E+ QS ADR KLDGLYECILCACC+TSCPSYWWN EEYLGPA L+ AYRWI
Sbjct: 163 NDNIPKD-KEFYQSRADRAKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLMQAYRWI 221
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
DSRD+ T +RL + ++ +YRC I NC TCPKGL+P AI K+K
Sbjct: 222 IDSRDQATAKRLDVM-QNSMSVYRCHTIMNCARTCPKGLNPGLAIAKVK 269
>sp|P21914|DHSB_DROME Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Drosophila melanogaster GN=SdhB PE=2
SV=2
Length = 297
Score = 322 bits (824), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 152/254 (59%), Positives = 188/254 (74%), Gaps = 4/254 (1%)
Query: 37 AQESAEVALESRVTVQDNVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDAL 96
A + LE + ++ + +K+F IYRWNPD KP++Q+Y VDL ECGPMVLDAL
Sbjct: 24 AISNGTAQLEQQAQPKEAQEPQIKKFEIYRWNPDNAGEKPYMQTYEVDLRECGPMVLDAL 83
Query: 97 QKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVI 156
KIK E D +L++RRSCREGICGSCAMNIGGTNT+AC+ ID +TSK + PLPHM+V+
Sbjct: 84 IKIKNEMDPTLTFRRSCREGICGSCAMNIGGTNTLACISKIDINTSKSLKVYPLPHMYVV 143
Query: 157 KDLVVDLTNFYQQYKSIEPWL--KTNMVPKDGR-EYRQSPADRKKLDGLYECILCACCTT 213
+DLV D+ NFY+QY++I+PWL K K G+ +Y QS DR KLDGLYECILCACC+T
Sbjct: 144 RDLVPDMNNFYEQYRNIQPWLQRKNEAGEKKGKAQYLQSVEDRSKLDGLYECILCACCST 203
Query: 214 SCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATC 273
SCPSYWWN E+YLGPA L+ AYRWI DSRDE + ERL L +D +YRC I NCT TC
Sbjct: 204 SCPSYWWNAEKYLGPAVLMQAYRWIIDSRDENSAERLNKL-KDPFSVYRCHTIMNCTRTC 262
Query: 274 PKGLDPADAIHKMK 287
PKGL+P AI ++K
Sbjct: 263 PKGLNPGRAIAEIK 276
>sp|O42772|DHSB_MYCGR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Mycosphaerella graminicola GN=SDH2 PE=3
SV=1
Length = 297
Score = 321 bits (822), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 151/228 (66%), Positives = 180/228 (78%), Gaps = 1/228 (0%)
Query: 60 KEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICG 119
K F IYRWNPD+P KP +QSY +DL++ GPM+LDAL +IK E D +L++RRSCREGICG
Sbjct: 64 KTFHIYRWNPDQPTDKPRMQSYTLDLNKTGPMMLDALIRIKNEVDPTLTFRRSCREGICG 123
Query: 120 SCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 179
SCAMNI G NT+ACL I DT+K T I PLPH +V+KDLV D+T FY+QYKSI+P+L+
Sbjct: 124 SCAMNIDGVNTLACLCRIPTDTAKETRIYPLPHTYVVKDLVPDMTQFYKQYKSIKPYLQR 183
Query: 180 NMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWIC 239
+ P DG+E RQS ADRKKLDGLYECILCACC+TSCPSYWWN EEYLGPA LL +YRWI
Sbjct: 184 DTAPPDGKENRQSVADRKKLDGLYECILCACCSTSCPSYWWNSEEYLGPAVLLQSYRWIN 243
Query: 240 DSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
DSRDE T +R AL + LYRC I NC+ TCPKGL+PA AI ++K
Sbjct: 244 DSRDEKTAQRKDAL-NNSMSLYRCHTILNCSRTCPKGLNPALAIAEIK 290
>sp|P21913|DHSB_RAT Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Rattus norvegicus GN=Sdhb PE=2 SV=2
Length = 282
Score = 320 bits (820), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 151/230 (65%), Positives = 181/230 (78%), Gaps = 2/230 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F IYRW+PD+ KP +Q+Y VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 41 IKTFAIYRWDPDKAGDKPRMQTYKVDLNKCGPMVLDALIKIKNEIDSTLTFRRSCREGIC 100
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID D K + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 101 GSCAMNINGGNTLACTRRIDTDLGKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 160
Query: 179 TNMVPKDGR-EYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G+ +Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 161 KKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 220
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRDE TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 221 MIDSRDEFTEERLAKL-QDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIK 269
>sp|Q9CQA3|DHSB_MOUSE Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Mus musculus GN=Sdhb PE=1 SV=1
Length = 282
Score = 320 bits (819), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 150/230 (65%), Positives = 183/230 (79%), Gaps = 2/230 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+ KP +Q+Y VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 41 IKKFAIYRWDPDKTGDKPRMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGIC 100
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID D SK + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 101 GSCAMNINGGNTLACTRRIDTDLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 160
Query: 179 TNMVPKDGR-EYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G+ +Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 161 KKDESQEGKQQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 220
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D +YRC I NCT TCPKGL+P AI ++K
Sbjct: 221 MIDSRDDFTEERLAKL-QDPFSVYRCHTIMNCTQTCPKGLNPGKAIAEIK 269
>sp|A5PL98|DHSB_DANRE Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Danio rerio GN=sdhb PE=2 SV=1
Length = 280
Score = 320 bits (819), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 149/230 (64%), Positives = 182/230 (79%), Gaps = 2/230 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F+IYRW+PD KP +Q+Y +DL+ CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 38 IKKFQIYRWDPDTVGDKPRMQTYEIDLNTCGPMVLDALIKIKNEMDSTLTFRRSCREGIC 97
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+ACL ID +TSK T I PLPHM+V+KDLV D++NFY QYKSIEP+LK
Sbjct: 98 GSCAMNINGGNTLACLNKIDTNTSKVTKIYPLPHMYVVKDLVPDMSNFYAQYKSIEPYLK 157
Query: 179 TNMVPKDGR-EYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
+ G+ +Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 158 KKDESQQGKQQYLQSVEDRQKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRW 217
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TE+RL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 218 MIDSRDDFTEDRLSKL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 266
>sp|Q75CI4|DHSB_ASHGO Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SDH2 PE=3 SV=1
Length = 261
Score = 320 bits (819), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 149/228 (65%), Positives = 177/228 (77%), Gaps = 1/228 (0%)
Query: 60 KEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICG 119
K F+IYRWNPD P KP +Q Y VDL++CGPMVLDAL KIK E D +L++RRSCREGICG
Sbjct: 29 KSFKIYRWNPDTPAEKPRMQEYKVDLNKCGPMVLDALIKIKNEQDPTLTFRRSCREGICG 88
Query: 120 SCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 179
SCAMNIGG NT+ACL ID +K I PLPHM+V+KDLV DLTNFY+QYKSI+P+L+
Sbjct: 89 SCAMNIGGRNTLACLCKIDQAENKDVKIYPLPHMYVVKDLVPDLTNFYKQYKSIQPYLQK 148
Query: 180 NMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWIC 239
P DGRE+ QS ADRKKLDGLYECILCACC+T+CPSYWWN E+YLGPA L+ AYRW+
Sbjct: 149 ASKPADGREHLQSIADRKKLDGLYECILCACCSTACPSYWWNNEQYLGPAVLMQAYRWMV 208
Query: 240 DSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
DSRD R + L ++ +YRC I NCT TCPKGL+P AI ++K
Sbjct: 209 DSRDGAGAGRREQL-QNAMSVYRCHTIMNCTRTCPKGLNPGKAIAEIK 255
>sp|Q3T189|DHSB_BOVIN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Bos taurus GN=SDHB PE=2 SV=1
Length = 280
Score = 318 bits (816), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 150/230 (65%), Positives = 181/230 (78%), Gaps = 2/230 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+ KP +Q+Y +DL+ CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 39 IKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRSCREGIC 98
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID + SK + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 99 GSCAMNINGGNTLACTRRIDTNLSKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 158
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
+ G+E Y QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 159 KKDESQGGKEQYLQSIEDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 218
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 219 MIDSRDDFTEERLAKL-QDPFSLYRCHTIMNCTQTCPKGLNPGKAIAEIK 267
>sp|P21912|DHSB_HUMAN Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Homo sapiens GN=SDHB PE=1 SV=3
Length = 280
Score = 318 bits (814), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 148/230 (64%), Positives = 183/230 (79%), Gaps = 2/230 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+ KP +Q+Y VDL++CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 39 IKKFAIYRWDPDKAGDKPHMQTYEVDLNKCGPMVLDALIKIKNEVDSTLTFRRSCREGIC 98
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID + +K + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 99 GSCAMNINGGNTLACTRRIDTNLNKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 158
Query: 179 TNMVPKDGR-EYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G+ +Y QS +R+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 159 KKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 218
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 219 MIDSRDDFTEERLAKL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 267
>sp|Q3B8J8|DHSB_XENLA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Xenopus laevis GN=sdhb PE=2 SV=1
Length = 282
Score = 317 bits (813), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 150/230 (65%), Positives = 179/230 (77%), Gaps = 2/230 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+P KP +Q+Y VDL+ CGPMVLDAL KIK E D +L++RRSCREGIC
Sbjct: 41 IKKFAIYRWDPDKPGDKPRMQTYEVDLNTCGPMVLDALIKIKNEVDPTLTFRRSCREGIC 100
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC ID + SK + I PLPHM+V+KDLV DL+NFY QYKSIEP+LK
Sbjct: 101 GSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLK 160
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
+ G+E Y QS DR KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 161 KKDKSQQGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRW 220
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 221 MIDSRDDFTEERLSKL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 269
>sp|P32420|DHSB_USTMA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Ustilago maydis (strain 521 / FGSC
9021) GN=SDH2 PE=3 SV=1
Length = 295
Score = 317 bits (813), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 148/237 (62%), Positives = 182/237 (76%), Gaps = 4/237 (1%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F+IYRWNPD+P KP LQSY +DL++ GPMVLDAL KIK E D +L++RRSCREGIC
Sbjct: 52 LKQFKIYRWNPDKPSEKPRLQSYTLDLNQTGPMVLDALIKIKNEIDPTLTFRRSCREGIC 111
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+ACL ID T I PLPHM+++KDLV DLT FY+QY+SIEP+LK
Sbjct: 112 GSCAMNIDGVNTLACLCRIDKQND--TKIYPLPHMYIVKDLVPDLTQFYKQYRSIEPFLK 169
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
+N P +G E+ QSP +R++LDGLYECILCACC+TSCPSYWWN +EYLGPA L+ AYRW+
Sbjct: 170 SNNTPSEG-EHLQSPEERRRLDGLYECILCACCSTSCPSYWWNQDEYLGPAVLMQAYRWM 228
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQP 295
DSRD+ EER Q L E+ LYRC I NC+ TCPK L+P AI ++K + P
Sbjct: 229 ADSRDDFGEERRQKL-ENTFSLYRCHTIMNCSRTCPKNLNPGKAIAQIKKDMAVGAP 284
>sp|Q007T0|DHSB_PIG Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Sus scrofa GN=SDHB PE=1 SV=1
Length = 280
Score = 315 bits (808), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 147/230 (63%), Positives = 181/230 (78%), Gaps = 2/230 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+ KP +Q+Y +DL+ CGPMVLDAL KIK E DS+L++RRSCREGIC
Sbjct: 39 IKKFAIYRWDPDKTGDKPHMQTYEIDLNNCGPMVLDALIKIKNEIDSTLTFRRSCREGIC 98
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC + ID + K + I PLPHM+VIKDLV DL+NFY QYKSIEP+LK
Sbjct: 99 GSCAMNINGGNTLACTRRIDTNLDKVSKIYPLPHMYVIKDLVPDLSNFYAQYKSIEPYLK 158
Query: 179 TNMVPKDGR-EYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G+ +Y QS +R+KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 159 KKDESQEGKQQYLQSIEEREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAVLMQAYRW 218
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 219 MIDSRDDFTEERLAKL-QDPFSLYRCHTIMNCTGTCPKGLNPGKAIAEIK 267
>sp|B0BM36|DHSB_XENTR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Xenopus tropicalis GN=sdhb PE=2 SV=1
Length = 284
Score = 315 bits (806), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 150/230 (65%), Positives = 180/230 (78%), Gaps = 2/230 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K+F IYRW+PD+P KP +Q+Y VDL+ECG MVLDAL KIK E D +L++RRSCREGIC
Sbjct: 43 IKKFAIYRWDPDKPGDKPRMQTYEVDLNECGSMVLDALIKIKNEMDPTLTFRRSCREGIC 102
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI G NT+AC ID + SK + I PLPHM+V+KDLV DL+NFY QYKSIEP+LK
Sbjct: 103 GSCAMNINGGNTLACTVRIDTNLSKVSKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLK 162
Query: 179 TNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
++G+E Y QS DR KLDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 163 KKDESQEGKEQYLQSIEDRDKLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRW 222
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD+ TEERL L +D LYRC I NCT TCPKGL+P AI ++K
Sbjct: 223 MIDSRDDYTEERLAKL-QDPFSLYRCHTIMNCTRTCPKGLNPGKAIAEIK 271
>sp|P80480|DHSB_RECAM Succinate dehydrogenase [ubiquinone] iron-sulfur subunit
OS=Reclinomonas americana GN=SDH2 PE=3 SV=1
Length = 239
Score = 314 bits (804), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 152/226 (67%), Positives = 179/226 (79%), Gaps = 4/226 (1%)
Query: 62 FRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSC 121
F++YRWNPD+ + KP + +Y VDL+ CGPMVLDAL KIK E DS+L++RRSCREG+CGSC
Sbjct: 11 FKVYRWNPDKKE-KPHISTYSVDLNSCGPMVLDALIKIKNEQDSTLTFRRSCREGVCGSC 69
Query: 122 AMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNM 181
AMNI GTNT+AC+K ID + K I PLPHM +IKDLV DL+NFY QYKSIEPW+KT
Sbjct: 70 AMNIDGTNTLACIKSIDTN-KKEMKIYPLPHMHIIKDLVPDLSNFYAQYKSIEPWMKTTE 128
Query: 182 VPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDS 241
D +E+ QS DR+KLDGLYEC+LCACC+TSCPSYWWN ++YLGPA LL AYRWI DS
Sbjct: 129 KKLD-KEFYQSRNDREKLDGLYECVLCACCSTSCPSYWWNSDKYLGPAVLLQAYRWIVDS 187
Query: 242 RDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
RD+ T ERLQ L ED KLYRC I NCT TCPK L+PA AI K+K
Sbjct: 188 RDQGTRERLQYL-EDPFKLYRCHTILNCTKTCPKHLNPAQAIAKIK 232
>sp|Q92JJ8|DHSB_RICCN Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia conorii
(strain ATCC VR-613 / Malish 7) GN=sdhB PE=3 SV=1
Length = 261
Score = 305 bits (781), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 149/229 (65%), Positives = 180/229 (78%), Gaps = 3/229 (1%)
Query: 60 KEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICG 119
++ +IYR++PD D P + S+ +DLS+ GPM+LDAL KIK E DS+L++RRSCREGICG
Sbjct: 28 RKIKIYRYDPDL-DKNPTIDSFEIDLSKTGPMILDALIKIKNEIDSTLTFRRSCREGICG 86
Query: 120 SCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 179
SCAMNI GTNT+AC+KPI+ D S I PLPHM V+KDLV D+++FY QY+SIEPWLKT
Sbjct: 87 SCAMNIDGTNTLACIKPIE-DISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKT 145
Query: 180 NMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWIC 239
+ E QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA LL AYRWI
Sbjct: 146 DSPTPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIA 205
Query: 240 DSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
DSRD+ T ERL+AL ED KLYRC I NCT TCPKGL+PA AI K+K+
Sbjct: 206 DSRDDNTGERLEAL-EDPFKLYRCHTIMNCTKTCPKGLNPAKAIGKIKS 253
>sp|Q1RGP3|DHSB_RICBR Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia bellii
(strain RML369-C) GN=sdhB PE=3 SV=1
Length = 261
Score = 302 bits (773), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 147/229 (64%), Positives = 180/229 (78%), Gaps = 3/229 (1%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+++ +IYR++PD D P + S+ +DLS+ GPMVLDAL KIK E DS++++RRSCREGIC
Sbjct: 27 LRKIKIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTVTFRRSCREGIC 85
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNI GTNT+AC+KPI+ + S I PLPHM V+KDLV D+++FY QY+SIEPWLK
Sbjct: 86 GSCAMNIDGTNTLACIKPIE-EISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLK 144
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
T+ E QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA LL AYRWI
Sbjct: 145 TDSPAPSNAERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWI 204
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
DSRD+ T ERL+AL ED KLYRC I NCT TCPKGL+PA AI ++K
Sbjct: 205 ADSRDDHTGERLEAL-EDPFKLYRCHTIMNCTKTCPKGLNPAKAISEIK 252
>sp|Q9ZEA1|DHSB_RICPR Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia
prowazekii (strain Madrid E) GN=sdhB PE=3 SV=1
Length = 261
Score = 300 bits (767), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 146/229 (63%), Positives = 177/229 (77%), Gaps = 3/229 (1%)
Query: 60 KEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICG 119
++ ++YR++PD D P + S+ +DLS+ GPMVLDAL KIK E DS+L++RRSCREGICG
Sbjct: 28 RKVKVYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICG 86
Query: 120 SCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 179
SCAMNI GTNT+AC+KPI+ D S I PLPHM V+KDLV D+++FY QY+SIEPWLK
Sbjct: 87 SCAMNIDGTNTLACIKPIE-DISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKN 145
Query: 180 NMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWIC 239
+ E QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA LL AYRWI
Sbjct: 146 DSPAPSNSERLQSIKDREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIA 205
Query: 240 DSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
DSRD+ T RL+AL ED KLYRC I NCT TCPKGL+PA AI ++K
Sbjct: 206 DSRDDNTGARLEAL-EDPFKLYRCHTIMNCTKTCPKGLNPAKAIGRVKN 253
>sp|Q68XS0|DHSB_RICTY Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia typhi
(strain ATCC VR-144 / Wilmington) GN=sdhB PE=3 SV=1
Length = 261
Score = 299 bits (765), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 145/229 (63%), Positives = 178/229 (77%), Gaps = 3/229 (1%)
Query: 60 KEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICG 119
++ ++YR++PD + P + S+ +DLS+ GPMVLDAL KIK E DS+L++RRSCREGICG
Sbjct: 28 RKVQVYRYDPDL-NKNPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICG 86
Query: 120 SCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 179
SCAMNI GTNT+AC+KPI+ D S I PLPHM V+KDLV D+++FY QY+SIEPWLK
Sbjct: 87 SCAMNIDGTNTLACIKPIE-DISGDIKIYPLPHMKVVKDLVPDMSHFYTQYESIEPWLKN 145
Query: 180 NMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWIC 239
+ E QS DR+KLDGLYECILCACC+TSCPSYWWN ++YLGPA LL AYRWI
Sbjct: 146 DNPAPSNSERLQSIQDREKLDGLYECILCACCSTSCPSYWWNSDKYLGPAILLQAYRWIA 205
Query: 240 DSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
DSRD+ T RL+AL ED KLYRC I NCT TCPKGL+PA AI ++K+
Sbjct: 206 DSRDDNTGARLEAL-EDPFKLYRCHTIMNCTKTCPKGLNPAKAIGRVKS 253
>sp|Q4UN71|DHSB_RICFE Succinate dehydrogenase iron-sulfur subunit OS=Rickettsia felis
(strain ATCC VR-1525 / URRWXCal2) GN=sdhB PE=3 SV=1
Length = 261
Score = 298 bits (764), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 146/229 (63%), Positives = 178/229 (77%), Gaps = 3/229 (1%)
Query: 60 KEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICG 119
++ +IYR++PD D P + S+ +DLS+ GPMVLDAL KIK E DS+L++RRSCREGICG
Sbjct: 28 RKVKIYRYDPDL-DENPTIDSFEIDLSKTGPMVLDALIKIKNEIDSTLTFRRSCREGICG 86
Query: 120 SCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT 179
SC+MNI GTNT+AC+KPI+ + S I PLPHM V+KDLV D+++FY QY+SIEPWLKT
Sbjct: 87 SCSMNIDGTNTLACIKPIE-EISGDIKIYPLPHMKVVKDLVPDMSHFYAQYESIEPWLKT 145
Query: 180 NMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWIC 239
+ E QS R+KLDGLYECILCACC+TSCPSYWWN ++YLGPA LL AYRWI
Sbjct: 146 DSPTPSNSERLQSIKGREKLDGLYECILCACCSTSCPSYWWNGDKYLGPAILLQAYRWIA 205
Query: 240 DSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
DSRD+ T ERL+ L ED KLYRC I NCT TCPKGL+PA AI K+K+
Sbjct: 206 DSRDDHTGERLEDL-EDPSKLYRCHTIMNCTKTCPKGLNPAKAIGKIKS 253
>sp|A8WPF0|DHSB_CAEBR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Caenorhabditis briggsae GN=sdhb-1 PE=3
SV=2
Length = 282
Score = 297 bits (761), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 137/231 (59%), Positives = 173/231 (74%), Gaps = 2/231 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F IYR+NP+ P +KP +Q + VDL +CG M+LDAL KIK E D +L++RRSCREGIC
Sbjct: 37 IKTFEIYRFNPEAPGAKPTIQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGIC 96
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNIGG NT+AC+ ID DTSK T I PLPHMFV+KDLV D+ FY QY SI+PW++
Sbjct: 97 GSCAMNIGGENTLACICKIDADTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQ 156
Query: 179 TNMVPKDG-REYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
G ++ QS A+R +LDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 157 KKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRW 216
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
+ DSRD+ +ERL + D ++C I NCT TCPK L+PA AI ++K+
Sbjct: 217 VIDSRDDYAQERLHRM-HDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKS 266
>sp|Q09545|DHSB_CAEEL Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Caenorhabditis elegans GN=sdhb-1 PE=2
SV=1
Length = 298
Score = 297 bits (761), Expect = 6e-80, Method: Compositional matrix adjust.
Identities = 137/231 (59%), Positives = 172/231 (74%), Gaps = 2/231 (0%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K F IYR+NP+ P +KP +Q + VDL +CG M+LDAL KIK E D +L++RRSCREGIC
Sbjct: 53 IKTFEIYRFNPEAPGAKPTVQKFDVDLDQCGTMILDALIKIKNEVDPTLTFRRSCREGIC 112
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCAMNIGG NT+AC+ ID DTSK T I PLPHMFV+KDLV D+ FY QY SI+PW++
Sbjct: 113 GSCAMNIGGQNTLACICKIDSDTSKSTKIYPLPHMFVVKDLVPDMNLFYAQYASIQPWIQ 172
Query: 179 TNMVPKDG-REYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
G ++ QS A+R +LDGLYECILCACC+TSCPSYWWN ++YLGPA L+ AYRW
Sbjct: 173 KKTPLTLGEKQMHQSVAERDRLDGLYECILCACCSTSCPSYWWNADKYLGPAVLMQAYRW 232
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
+ DSRD+ ERL + D ++C I NCT TCPK L+PA AI ++K+
Sbjct: 233 VIDSRDDYATERLHRM-HDSFSAFKCHTIMNCTKTCPKHLNPAKAIGEIKS 282
>sp|Q59662|DHSB_PARDE Succinate dehydrogenase iron-sulfur subunit OS=Paracoccus
denitrificans GN=sdhB PE=3 SV=1
Length = 259
Score = 288 bits (737), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 145/237 (61%), Positives = 178/237 (75%), Gaps = 12/237 (5%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
++ F IYRW+PD ++ P + +Y VD+ +CGPMVLDAL KIK E D +L++RRSCREGIC
Sbjct: 27 VRRFNIYRWDPDTGEN-PRIDTYFVDMDKCGPMVLDALIKIKNEIDPTLTFRRSCREGIC 85
Query: 119 GSCAMNIGGTNTVACLKPID---GDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEP 175
GSCAMNI G N +AC+ +D GD + I PLPHM V+KDLV DLT+FY Q+ S++P
Sbjct: 86 GSCAMNIDGGNHLACIYGMDEIKGDVN----IYPLPHMPVVKDLVPDLTHFYAQHASVQP 141
Query: 176 WLKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAY 235
+L T P +E+RQS DRKKLDGLYEC++CA C+T+CPSYWWN + YLGPAALLHAY
Sbjct: 142 YLITE-TPTPDKEWRQSIEDRKKLDGLYECVMCASCSTACPSYWWNGDRYLGPAALLHAY 200
Query: 236 RWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHML 292
RWI DSRDE T ERL +L ED KLYRC I NCT TCPKGL+PA AI + KHM+
Sbjct: 201 RWIIDSRDEATGERLDSL-EDPFKLYRCHTIMNCTNTCPKGLNPAKAIASI--KHMM 254
>sp|Q55CC2|DHSB_DICDI Succinate dehydrogenase [ubiquinone] iron-sulfur subunit,
mitochondrial OS=Dictyostelium discoideum GN=sdhB PE=3
SV=1
Length = 287
Score = 284 bits (726), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/284 (49%), Positives = 192/284 (67%), Gaps = 18/284 (6%)
Query: 13 KVAGIFGRAEAKKQDFPVLEGHPAAQESAEVALESRVTVQDNVKKVMKEFRIYRWNPDRP 72
K A + R+ + F A S ++ +++ K F++YR+N +
Sbjct: 7 KRASVLARSNGIQSAFYTTTAKTEASSSPQMKIKTA-----EKKDHFVNFQVYRYN-EET 60
Query: 73 DSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVA 132
+KP++Q+Y+++L +CGPMVLDAL IK D +LS+RRSCREGICGSCAMN+ G+NT+A
Sbjct: 61 TAKPYIQTYNINLKDCGPMVLDALLLIKNNIDPTLSFRRSCREGICGSCAMNLNGSNTLA 120
Query: 133 CLKPI----DGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNM-VPK-DG 186
C K I GDT K + PLPHM V++DL+ DL++FY Q+KSI+PWL+ + VP+ +G
Sbjct: 121 CTKKITDCLSGDTVK---VYPLPHMHVVRDLIPDLSHFYTQHKSIKPWLEPAVDVPRYNG 177
Query: 187 REYRQSPADRKKLDGLYECILCACCTTSCPSYWWNP---EEYLGPAALLHAYRWICDSRD 243
+E QS +R KLDGLYECILCACC+TSCPSYWW+ YLGPA LL AYRWI DSRD
Sbjct: 178 KEILQSKENRHKLDGLYECILCACCSTSCPSYWWSEGGDGGYLGPAVLLQAYRWIADSRD 237
Query: 244 ELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ ++RL L+ED+ K+Y+C I NCTA CPKGL+P +I +K
Sbjct: 238 SIQKDRLAILSEDQMKVYKCHTIMNCTAVCPKGLNPGKSIANIK 281
>sp|P48933|DHSB_CYACA Succinate dehydrogenase [ubiquinone] iron-sulfur subunit
OS=Cyanidium caldarium GN=SDH2 PE=3 SV=1
Length = 262
Score = 280 bits (716), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 132/233 (56%), Positives = 169/233 (72%), Gaps = 3/233 (1%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
+K +I+RW+ P+ +Y V L CGP+VLDAL KIK E DS++S+RRSCREGIC
Sbjct: 20 LKLIKIFRWDSSEKKD-PWYSTYVVSLKNCGPIVLDALIKIKNECDSTVSFRRSCREGIC 78
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCA+NI GTN++ACL+ ++ + + PLPH+FV+KDLVVDLTNFY QY+ I+PWL+
Sbjct: 79 GSCAININGTNSLACLQKLNIKNN-IIYVYPLPHIFVLKDLVVDLTNFYAQYRLIQPWLQ 137
Query: 179 TNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWI 238
+++ K +E QS DR LDGLYECILCACC+ SCPSYWWN ++YLGPA LL AYRWI
Sbjct: 138 SSLNIKSKKEIYQSKQDRLYLDGLYECILCACCSASCPSYWWNHDKYLGPAVLLQAYRWI 197
Query: 239 CDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHM 291
DSRD+ T RL +L +D KLYRC I NCT TCPK L+P I +K + +
Sbjct: 198 VDSRDDNTLSRLLSL-KDSYKLYRCHTIMNCTKTCPKHLNPGKVIASIKKRLL 249
>sp|P48932|DHSB_CHOCR Succinate dehydrogenase [ubiquinone] iron-sulfur subunit
OS=Chondrus crispus GN=SDH2 PE=3 SV=1
Length = 250
Score = 278 bits (710), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 133/245 (54%), Positives = 171/245 (69%), Gaps = 4/245 (1%)
Query: 45 LESRVTVQDNVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETD 104
L ++ DN K RIYRWNP+ + P+ + + + CGPM+LDAL +IK D
Sbjct: 6 LNQKIITIDNSSPYQKFIRIYRWNPNL-NLNPWFSIFPISTNNCGPMILDALIQIKNIQD 64
Query: 105 SSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLT 164
SSL++RRSCREGICGSC+MNI GTN++ACL+ ++ ++ TI PLPH ++IKDLV DL+
Sbjct: 65 SSLTFRRSCREGICGSCSMNIDGTNSLACLRSLNTKSNFITI-YPLPHTYIIKDLVPDLS 123
Query: 165 NFYQQYKSIEPWLKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEE 224
NFY QYK I+PWL N + +E QS DR +LDGLYECILCACC+ SCPSYWWN ++
Sbjct: 124 NFYAQYKLIKPWL-INKIGFSLKENLQSKIDRLELDGLYECILCACCSASCPSYWWNQDK 182
Query: 225 YLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIH 284
YLGPA LL AYRWI DSRD TE RL L ++ +L+RC I NC+ TCPK L+P AI
Sbjct: 183 YLGPAILLQAYRWIVDSRDNSTENRLNFL-NNKMRLFRCHTIMNCSKTCPKSLNPGKAIA 241
Query: 285 KMKTK 289
+K +
Sbjct: 242 SIKYR 246
>sp|P80477|DHSB_PORPU Succinate dehydrogenase [ubiquinone] iron-sulfur subunit
OS=Porphyra purpurea GN=SDH2 PE=3 SV=1
Length = 239
Score = 275 bits (702), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 137/230 (59%), Positives = 166/230 (72%), Gaps = 7/230 (3%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYH-VDLSECGPMVLDALQKIKAETDSSLSYRRSCREGI 117
+K RIYRW P F S H + S CGPM+LDAL KIK E DSSL++RRSCREGI
Sbjct: 10 LKFIRIYRWTPSNQAEAKF--SVHPIHTSNCGPMILDALIKIKDEQDSSLAFRRSCREGI 67
Query: 118 CGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 177
CGSC+MNI G NT+ACLKPI + + TI PLPHM++IKDLV DL+NF+ QYK I+PWL
Sbjct: 68 CGSCSMNIDGINTLACLKPIKTNANIITIY-PLPHMYIIKDLVPDLSNFFSQYKYIKPWL 126
Query: 178 KTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
N VPK EY QS DR +L+G+YECILCACC+ SCPSYWWN ++YLGPA LL AYRW
Sbjct: 127 -INNVPKKS-EYLQSEKDRSELNGIYECILCACCSASCPSYWWNHDKYLGPAILLQAYRW 184
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
+ DSRD +ERL+ L + KL++C I NC+ TCPK L+P AI +K
Sbjct: 185 LADSRDTNAKERLK-LLGGKSKLFKCHTIMNCSRTCPKSLNPGKAIASIK 233
>sp|Q8ZQU2|DHSB_SALTY Succinate dehydrogenase iron-sulfur subunit OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=sdhB PE=3 SV=2
Length = 238
Score = 243 bits (621), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 162/231 (70%), Gaps = 6/231 (2%)
Query: 61 EFRIYRWNPDRPDSKPFLQSYHVDLSEC-GPMVLDALQKIKAETDSSLSYRRSCREGICG 119
EF IYR+NPD D+ P +Q Y ++ E M+LDAL ++K E D SLS+RRSCREG+CG
Sbjct: 4 EFSIYRYNPDV-DNAPRMQDYTLEGEEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCG 61
Query: 120 SCAMNIGGTNTVACLKPIDGDT--SKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 177
S +N+ G N +AC+ PI T K +I PLP + VI+DLVVD+ FY QY+ I+P+L
Sbjct: 62 SDGLNMNGKNGLACITPISALTQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Query: 178 KTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
N RE+ Q P R+KLDGLYECILCACC+TSCPS+WWNP++++GPA LL AYR+
Sbjct: 122 LNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRF 181
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
+ DSRD T+ RL+ ++ D ++RC +I NC + CPKGL+P AI +K+
Sbjct: 182 LIDSRDTETDSRLEGMS-DAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKS 231
>sp|P07014|DHSB_ECOLI Succinate dehydrogenase iron-sulfur subunit OS=Escherichia coli
(strain K12) GN=sdhB PE=1 SV=1
Length = 238
Score = 242 bits (617), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 120/231 (51%), Positives = 159/231 (68%), Gaps = 6/231 (2%)
Query: 61 EFRIYRWNPDRPDSKPFLQSYHVDLSEC-GPMVLDALQKIKAETDSSLSYRRSCREGICG 119
EF IYR+NPD D P +Q Y ++ E M+LDAL ++K E D SLS+RRSCREG+CG
Sbjct: 4 EFSIYRYNPDV-DDAPRMQDYTLEADEGRDMMLLDALIQLK-EKDPSLSFRRSCREGVCG 61
Query: 120 SCAMNIGGTNTVACLKPIDG--DTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL 177
S +N+ G N +AC+ PI K +I PLP + VI+DLVVD+ FY QY+ I+P+L
Sbjct: 62 SDGLNMNGKNGLACITPISALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYL 121
Query: 178 KTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
N RE+ Q P R+KLDGLYECILCACC+TSCPS+WWNP++++GPA LL AYR+
Sbjct: 122 LNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSCPSFWWNPDKFIGPAGLLAAYRF 181
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
+ DSRD T+ RL L+ D ++RC +I NC + CPKGL+P AI +K+
Sbjct: 182 LIDSRDTETDSRLDGLS-DAFSVFRCHSIMNCVSVCPKGLNPTRAIGHIKS 231
>sp|P51053|DHSB_COXBU Succinate dehydrogenase iron-sulfur subunit OS=Coxiella burnetii
(strain RSA 493 / Nine Mile phase I) GN=sdhB PE=3 SV=1
Length = 235
Score = 202 bits (513), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/231 (47%), Positives = 157/231 (67%), Gaps = 6/231 (2%)
Query: 62 FRIYRWNPDRPDSKPFLQSYHVDLSEC-GPMVLDALQKIKAETDSSLSYRRSCREGICGS 120
F I R+NP+ D KP++Q + +D+S G M+L+AL+ ++ E + RRSC EG+CGS
Sbjct: 3 FSIMRFNPET-DKKPYMQDFELDVSAIQGKMLLNALEALR-EKHPDIGLRRSCAEGVCGS 60
Query: 121 CAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTN 180
MNI G N +AC+ + D ++ PLP +I+DL+VD+ FY QYK ++P+L N
Sbjct: 61 DGMNINGKNALACVTQLK-DLPDRVVVRPLPGFPIIRDLIVDMEQFYAQYKKVKPYL-LN 118
Query: 181 MVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICD 240
+E QSP +R KLDGLYECILCACC++SCPSYWWNP++++GPA LL +YR+I D
Sbjct: 119 DQEAPQKERLQSPEERAKLDGLYECILCACCSSSCPSYWWNPDKFIGPAGLLWSYRFIAD 178
Query: 241 SRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHM 291
SRD +ERL A+ +D ++RCR I +C CPK L+PA AI K++T+ +
Sbjct: 179 SRDSKEKERLDAM-KDPYSVFRCRTIMDCATVCPKNLNPAKAIRKIRTEML 228
>sp|Q10761|FRDB_MYCTU Fumarate reductase iron-sulfur subunit OS=Mycobacterium
tuberculosis GN=frdB PE=3 SV=1
Length = 247
Score = 147 bits (371), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 124/225 (55%), Gaps = 5/225 (2%)
Query: 64 IYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAM 123
+ R+ P+ +S P Q+Y V L+ VLD L IK D +LS+R SCR GICGS M
Sbjct: 9 VSRYRPEI-ESAPTFQAYEVPLTREW-AVLDGLTYIKDHLDGTLSFRWSCRMGICGSSGM 66
Query: 124 NIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWL-KTNMV 182
I G +AC + P + P+ + VI+DLVVD+++F + S++PWL + +
Sbjct: 67 TINGDPKLACATFLADYLPGPVRVEPMRNFPVIRDLVVDISDFMAKLPSVKPWLVRHDEP 126
Query: 183 PKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSR 242
P + EYRQ+PA+ CI C C ++CP Y +P ++LGPAA+ R+ DSR
Sbjct: 127 PVEDGEYRQTPAELDAFKQFSMCINCMLCYSACPVYALDP-DFLGPAAIALGQRYNLDSR 185
Query: 243 DELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
D+ +R L + + C + C+ CPKG+DPA AI + K
Sbjct: 186 DQGAADRRDVLAAADGA-WACTLVGECSTACPKGVDPAGAIQRYK 229
>sp|P44893|FRDB_HAEIN Fumarate reductase iron-sulfur subunit OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=frdB PE=3
SV=1
Length = 256
Score = 139 bits (350), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 85/237 (35%), Positives = 130/237 (54%), Gaps = 16/237 (6%)
Query: 64 IYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAM 123
+ R+NP+ D +P L +Y V +LDAL IK + + SLSYR SCR ICGSC M
Sbjct: 11 VLRYNPEI-DQEPHLSTYQVPYDN-QTSLLDALGYIKDKLEPSLSYRWSCRMAICGSCGM 68
Query: 124 NIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVP 183
+ +AC K D S I PL + + +DLVVDL++F + ++I+P++ N P
Sbjct: 69 MVNNKPKLAC-KTFLRDYSGHMRIEPLANFPIERDLVVDLSHFIESLEAIKPYIIGNEAP 127
Query: 184 K-DGREY----------RQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALL 232
DG+ + +Q+PA +K CI C C +CP + NP E+LGPAA+
Sbjct: 128 ALDGKPHPSKELQVSRTKQTPAQLEKYRQFSMCINCGLCYAACPQFGLNP-EFLGPAAIT 186
Query: 233 HAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTK 289
A+R+ D+RD +R+ +L + ++ C + C+ CPK +DPA AI++ K +
Sbjct: 187 MAHRYNLDNRDHGKAKRM-SLLNGKNGVWSCTFVGYCSEVCPKHVDPASAINQGKVE 242
>sp|P20921|FRDB_PROVU Fumarate reductase iron-sulfur subunit OS=Proteus vulgaris GN=frdB
PE=3 SV=2
Length = 245
Score = 134 bits (336), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 88/239 (36%), Positives = 125/239 (52%), Gaps = 9/239 (3%)
Query: 51 VQDNVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYR 110
+ D++K V E + R+NP+ D P +Y V E +LDAL IK LSYR
Sbjct: 1 MADDMKHVKME--VMRYNPET-DDAPHFVTYDVPYDE-QTSLLDALGYIKDNLAPDLSYR 56
Query: 111 RSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQY 170
SCR ICGSC M + +AC K D I L + V +DLVVD+T+F +
Sbjct: 57 WSCRMAICGSCGMMVNRVPKLAC-KTFMRDYPNGVRIEALGNFPVERDLVVDMTHFIESL 115
Query: 171 KSIEPW-LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPA 229
++I+P+ L + P +G +Q+PA K CI C C +CP + NP E++GPA
Sbjct: 116 EAIKPYILGNDRKPSEGPN-KQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPA 173
Query: 230 ALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKT 288
A+ A R+ DSRD +ER+ L E ++ C + C+ CPK +DPA AI + K
Sbjct: 174 AITLAQRYNTDSRDHGAKERMPQLN-GENGVWSCTFVGYCSEVCPKHVDPAAAIQQGKA 231
>sp|P0AC50|FRDB_SHIFL Fumarate reductase iron-sulfur subunit OS=Shigella flexneri GN=frdB
PE=3 SV=2
Length = 244
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 121/233 (51%), Gaps = 7/233 (3%)
Query: 59 MKEFRI--YRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREG 116
MK +I R+NP+ D+ P Y V + +LDAL IK LSYR SCR
Sbjct: 4 MKNLKIEVVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMA 61
Query: 117 ICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 176
ICGSC M + +AC K D + + L + + +DLVVD+T+F + ++I+P+
Sbjct: 62 ICGSCGMMVNNVPKLAC-KTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120
Query: 177 LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
+ N D Q+PA K CI C C +CP + NP E++GPAA+ A+R
Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTK 289
+ DSRD +ER+ L + ++ C + C+ CPK +DPA AI + K +
Sbjct: 180 YNEDSRDHGKKERMAQLNS-QNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVE 231
>sp|P0AC47|FRDB_ECOLI Fumarate reductase iron-sulfur subunit OS=Escherichia coli (strain
K12) GN=frdB PE=1 SV=2
Length = 244
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 121/233 (51%), Gaps = 7/233 (3%)
Query: 59 MKEFRI--YRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREG 116
MK +I R+NP+ D+ P Y V + +LDAL IK LSYR SCR
Sbjct: 4 MKNLKIEVVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMA 61
Query: 117 ICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 176
ICGSC M + +AC K D + + L + + +DLVVD+T+F + ++I+P+
Sbjct: 62 ICGSCGMMVNNVPKLAC-KTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120
Query: 177 LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
+ N D Q+PA K CI C C +CP + NP E++GPAA+ A+R
Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTK 289
+ DSRD +ER+ L + ++ C + C+ CPK +DPA AI + K +
Sbjct: 180 YNEDSRDHGKKERMAQLNS-QNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVE 231
>sp|P0AC48|FRDB_ECOL6 Fumarate reductase iron-sulfur subunit OS=Escherichia coli O6:H1
(strain CFT073 / ATCC 700928 / UPEC) GN=frdB PE=3 SV=2
Length = 244
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 121/233 (51%), Gaps = 7/233 (3%)
Query: 59 MKEFRI--YRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREG 116
MK +I R+NP+ D+ P Y V + +LDAL IK LSYR SCR
Sbjct: 4 MKNLKIEVVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMA 61
Query: 117 ICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 176
ICGSC M + +AC K D + + L + + +DLVVD+T+F + ++I+P+
Sbjct: 62 ICGSCGMMVNNVPKLAC-KTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120
Query: 177 LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
+ N D Q+PA K CI C C +CP + NP E++GPAA+ A+R
Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTK 289
+ DSRD +ER+ L + ++ C + C+ CPK +DPA AI + K +
Sbjct: 180 YNEDSRDHGKKERMAQLNS-QNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVE 231
>sp|P0AC49|FRDB_ECO57 Fumarate reductase iron-sulfur subunit OS=Escherichia coli O157:H7
GN=frdB PE=3 SV=2
Length = 244
Score = 131 bits (330), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 82/233 (35%), Positives = 121/233 (51%), Gaps = 7/233 (3%)
Query: 59 MKEFRI--YRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREG 116
MK +I R+NP+ D+ P Y V + +LDAL IK LSYR SCR
Sbjct: 4 MKNLKIEVVRYNPEV-DTAPHSAFYEVPY-DATTSLLDALGYIKDNLAPDLSYRWSCRMA 61
Query: 117 ICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPW 176
ICGSC M + +AC K D + + L + + +DLVVD+T+F + ++I+P+
Sbjct: 62 ICGSCGMMVNNVPKLAC-KTFLRDYTDGMKVEALANFPIERDLVVDMTHFIESLEAIKPY 120
Query: 177 LKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
+ N D Q+PA K CI C C +CP + NP E++GPAA+ A+R
Sbjct: 121 IIGNSRTADQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQFGLNP-EFIGPAAITLAHR 179
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTK 289
+ DSRD +ER+ L + ++ C + C+ CPK +DPA AI + K +
Sbjct: 180 YNEDSRDHGKKERMAQLNS-QNGVWSCTFVGYCSEVCPKHVDPAAAIQQGKVE 231
>sp|O06914|FRDB_HELPY Fumarate reductase iron-sulfur subunit OS=Helicobacter pylori
(strain ATCC 700392 / 26695) GN=frdB PE=3 SV=2
Length = 245
Score = 114 bits (286), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 116/244 (47%), Gaps = 8/244 (3%)
Query: 51 VQDNVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVL-DALQKIKAETDSSLSY 109
+ DN + ++ R+ +++P SKP + Y L E M L AL I+ D LS+
Sbjct: 1 MSDNERTIV--VRVLKFDPQSAVSKPHFKEYQ--LKETPSMTLFIALNLIREHQDPDLSF 56
Query: 110 RRSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTN-FYQ 168
CR GICGSCAM + G +AC S + P+P +IKDL V+ + F
Sbjct: 57 DFVCRAGICGSCAMMVNGRPRLACKTLTSSFESGVITLMPMPSFTLIKDLSVNTGDWFLD 116
Query: 169 QYKSIEPWLKTNMVPKDGR-EYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLG 227
K +E W + R E R P + +++ L CI C CC SC + P ++G
Sbjct: 117 MTKRVESWAHSKEEVDITRPEKRVEPDEAQEVFELDRCIECGCCIASCGTKLMRP-NFIG 175
Query: 228 PAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
A + A R++ DS DE ++ L D+ ++ C ++ C TCPK L +I ++
Sbjct: 176 AAGMNRAMRFMIDSHDERNDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLR 235
Query: 288 TKHM 291
+ +
Sbjct: 236 NRML 239
>sp|Q9ZMP1|FRDB_HELPJ Fumarate reductase iron-sulfur subunit OS=Helicobacter pylori
(strain J99) GN=frdB PE=3 SV=1
Length = 245
Score = 111 bits (278), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 72/244 (29%), Positives = 117/244 (47%), Gaps = 8/244 (3%)
Query: 51 VQDNVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVL-DALQKIKAETDSSLSY 109
+ DN + ++ R+ +++P +KP + Y L E M L AL I+ D LS+
Sbjct: 1 MSDNERTIV--VRVLKFDPQSAVNKPHFKEYQ--LKETPSMTLFIALNLIREHQDPDLSF 56
Query: 110 RRSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTN-FYQ 168
CR GICGSCAM + G +AC + + P+P +IKDL V+ + F
Sbjct: 57 DFVCRAGICGSCAMMVNGRPRLACKTLTSSFENGVITLMPMPSFTLIKDLSVNTGDWFSD 116
Query: 169 QYKSIEPWLKTN-MVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLG 227
K +E W + V E R P + +++ L CI C CC SC + P ++G
Sbjct: 117 MTKRVESWAHSKEEVDITKPEKRVEPDEAQEVFELDRCIECGCCIASCGTKLMRP-NFIG 175
Query: 228 PAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287
A + A R++ DS DE +++ L D+ ++ C ++ C TCPK L +I ++
Sbjct: 176 AAGMNRAMRFMIDSHDERSDDDFYELVGDDDGVFGCMSLIACHDTCPKELPLQSSIATLR 235
Query: 288 TKHM 291
+ +
Sbjct: 236 NRML 239
>sp|P17596|FRDB_WOLSU Fumarate reductase iron-sulfur subunit OS=Wolinella succinogenes
(strain ATCC 29543 / DSM 1740 / LMG 7466 / NCTC 11488 /
FDC 602W) GN=frdB PE=1 SV=1
Length = 239
Score = 108 bits (269), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 107/233 (45%), Gaps = 4/233 (1%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
M R+++++P SKP Q Y ++ + + + L I+ D L++ CR GIC
Sbjct: 4 MLTIRVFKYDPQSAVSKPHFQEYKIEEAPSMTIFI-VLNMIRETYDPDLNFDFVCRAGIC 62
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQ-QYKSIEPWL 177
GSC M I G ++AC + PLP +IKDL VD N++ + +E W+
Sbjct: 63 GSCGMMINGRPSLACRTLTKDFEDGVITLLPLPAFKLIKDLSVDTGNWFNGMSQRVESWI 122
Query: 178 KTNMVPKDGR-EYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYR 236
+ E R P +++ L CI C CC +C + E+++G A L R
Sbjct: 123 HAQKEHDISKLEERIEPEVAQEVFELDRCIECGCCIAACGTKIMR-EDFVGAAGLNRVVR 181
Query: 237 WICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTK 289
++ D DE T+E L D+ ++ C + C CPK L I ++ K
Sbjct: 182 FMIDPHDERTDEDYYELIGDDDGVFGCMTLLACHDVCPKNLPLQSKIAYLRRK 234
>sp|Q6LYC4|Y1067_METMP Uncharacterized iron-sulfur protein MMP1067 OS=Methanococcus
maripaludis (strain S2 / LL) GN=MMP1067 PE=3 SV=1
Length = 494
Score = 93.6 bits (231), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 14/205 (6%)
Query: 89 GPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIIT 148
G +LDAL+ I ++ +R SC+ G CGSCA+ I + +AC ++ + II
Sbjct: 22 GLTILDALEYINKTYGENIQFRSSCKAGQCGSCAVMINKKSKLACKTKVEDN----MIIE 77
Query: 149 PLPHMFVIKDLVVDLTNFYQQYKSIEPWLKT---NMVPKDGREYRQSPADRKKLDGLYEC 205
PL VI DLVVD +Y++ ++ +++ + K+ + P D K + + C
Sbjct: 78 PLEGFDVISDLVVDREPYYKKIGTLRNYIQKKNEKISEKELDGLKLYPDDLKDVKKIRGC 137
Query: 206 ILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRA 265
I C C CP+ ++ Y GP + R+ D +DE+ E+ +A E+ +Y C
Sbjct: 138 IDCLSCIAMCPARKYS--NYPGPTLMRQLARFAFDPKDEIDREK-EAFDEN---IYNCTT 191
Query: 266 IKNCTATCPKGLDPA-DAIHKMKTK 289
C CPK +D +A+ K++ K
Sbjct: 192 CGRCVEVCPKEIDIVHNAVEKLREK 216
>sp|Q57557|Y092_METJA Uncharacterized iron-sulfur protein MJ0092 OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=MJ0092 PE=3 SV=1
Length = 489
Score = 88.6 bits (218), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 109/232 (46%), Gaps = 22/232 (9%)
Query: 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC 118
M + + R+N + K +L+SY V + VL+AL+ I ++++ +R SCR C
Sbjct: 1 MIKITVKRFNGE----KEYLESYEVPEN---ITVLEALEYINKHYEANILFRASCRNAQC 53
Query: 119 GSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLK 178
GSCA+ I G +AC + II PL VI+DL+VD +Y++ I+ +L
Sbjct: 54 GSCAVTINGEPRLAC----ETKVEDGMIIEPLRGFKVIRDLIVDREPYYKKLLGIKNYLI 109
Query: 179 TNMVPKDGREYR-QSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRW 237
P++ + + K+L G CI C C + CP+ + +Y GP + R+
Sbjct: 110 RKNYPEELEILIPKYVEENKELRG---CIDCLSCLSVCPAREVS--DYPGPTFMRQLARF 164
Query: 238 ICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPAD-AIHKMKT 288
D RDE E +T +Y C C CPK +D AI K++
Sbjct: 165 AFDKRDEDGRE----ITAYFENIYNCTTCAKCVEVCPKEIDIVHRAIEKLRA 212
>sp|P08066|DHSB_BACSU Succinate dehydrogenase iron-sulfur subunit OS=Bacillus subtilis
(strain 168) GN=sdhB PE=3 SV=3
Length = 253
Score = 80.9 bits (198), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 108/242 (44%), Gaps = 24/242 (9%)
Query: 60 KEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKI-------KAETDSSLSYRRS 112
K R D DS P+ + + + V+ AL +I K E + +++ +
Sbjct: 5 KTIRFIITRQDTADSTPYDEEFEIPYRP-NLNVISALMEIRRNPVNVKGEKTTPVTWDMN 63
Query: 113 CREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKS 172
C E +CG+C+M I G +C ID +P + P+ V++DL VD + + K
Sbjct: 64 CLEEVCGACSMVINGKPRQSCTALID-QLEQPIRLKPMKTFPVVRDLQVDRSRMFDSLKK 122
Query: 173 IEPWLKTNMVPKDGREYRQSPADR---KKLDGLYE---CILCACCTTSCPSYWWNPEEYL 226
++ W +P DG Y P R K+ YE C+ C C +CP+ + +++
Sbjct: 123 VKAW-----IPIDG-TYDLGPGPRMPEKRRQWAYELSKCMTCGVCLEACPNV-NSKSKFM 175
Query: 227 GPAALLHAYRWICDSRDELTE-ERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHK 285
GPA + + + + ERL+AL DE L C +NC +CPKG+ +I
Sbjct: 176 GPAPMSQVRLFNAHPTGAMNKSERLEALM-DEGGLADCGNSQNCVQSCPKGIPLTTSIAA 234
Query: 286 MK 287
+
Sbjct: 235 LN 236
>sp|P52074|GLCF_ECOLI Glycolate oxidase iron-sulfur subunit OS=Escherichia coli (strain
K12) GN=glcF PE=4 SV=1
Length = 407
Score = 43.5 bits (101), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 42/90 (46%), Gaps = 8/90 (8%)
Query: 188 EYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTE 247
E RQ+ + L C+ C CT +CP+Y +E GP ++ + + + +E+T
Sbjct: 8 EMRQNARALEADSILRACVHCGFCTATCPTYQLLGDELDGPRGRIYLIKQVLEG-NEVT- 65
Query: 248 ERLQALTEDERKLYRCRAIKNCTATCPKGL 277
+ + L RC +NC TCP G+
Sbjct: 66 ------LKTQEHLDRCLTCRNCETTCPSGV 89
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.423
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 112,662,582
Number of Sequences: 539616
Number of extensions: 4562309
Number of successful extensions: 14471
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 14254
Number of HSP's gapped (non-prelim): 66
length of query: 302
length of database: 191,569,459
effective HSP length: 117
effective length of query: 185
effective length of database: 128,434,387
effective search space: 23760361595
effective search space used: 23760361595
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)