Query 045926
Match_columns 302
No_of_seqs 301 out of 2202
Neff 6.8
Searched_HMMs 29240
Date Mon Mar 25 11:54:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045926.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045926hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3vr8_B Iron-sulfur subunit of 100.0 9.4E-62 3.2E-66 449.3 20.7 241 55-296 31-272 (282)
2 2h88_B Succinate dehydrogenase 100.0 4.9E-55 1.7E-59 399.1 18.2 239 57-296 9-248 (252)
3 2bs2_B Quinol-fumarate reducta 100.0 6.7E-53 2.3E-57 382.0 17.1 234 58-294 3-239 (241)
4 2wdq_B Succinate dehydrogenase 100.0 1.7E-50 5.9E-55 365.4 18.3 233 59-294 2-237 (238)
5 1kf6_B Fumarate reductase iron 100.0 7.9E-49 2.7E-53 355.5 16.5 231 59-295 5-236 (243)
6 3kwl_A Uncharacterized protein 100.0 1.8E-41 6.1E-46 337.6 15.6 199 54-294 19-223 (514)
7 1rm6_C 4-hydroxybenzoyl-COA re 99.8 9.4E-21 3.2E-25 161.7 8.7 144 58-273 3-147 (161)
8 1t3q_A Quinoline 2-oxidoreduct 99.8 4.3E-19 1.5E-23 152.4 11.0 143 59-274 11-155 (168)
9 3i9v_3 NADH-quinone oxidoreduc 99.8 2.5E-20 8.5E-25 193.8 0.8 181 59-278 1-235 (783)
10 3c8y_A Iron hydrogenase 1; dit 99.7 3.9E-19 1.3E-23 179.0 -0.2 187 59-278 1-205 (574)
11 1ffv_A CUTS, iron-sulfur prote 99.6 9.9E-16 3.4E-20 130.7 11.0 79 57-152 3-82 (163)
12 1n62_A Carbon monoxide dehydro 99.6 2.1E-15 7.2E-20 129.0 11.0 78 58-152 4-82 (166)
13 3hrd_D Nicotinate dehydrogenas 99.4 2.9E-13 9.9E-18 115.0 7.3 78 58-152 4-82 (160)
14 2w3s_A Xanthine dehydrogenase; 99.1 4.3E-11 1.5E-15 117.5 5.8 94 59-170 2-105 (462)
15 1vlb_A Aldehyde oxidoreductase 99.1 5.3E-11 1.8E-15 125.4 6.2 78 58-152 2-81 (907)
16 3nvw_A Xanthine dehydrogenase/ 99.1 8.7E-11 3E-15 99.9 5.3 77 58-152 3-92 (164)
17 1dgj_A Aldehyde oxidoreductase 99.0 1.5E-10 5.1E-15 122.0 5.9 78 58-152 2-81 (907)
18 1jq4_A Methane monooxygenase c 98.6 5.9E-08 2E-12 75.2 5.6 65 59-139 4-88 (98)
19 1frr_A Ferredoxin I; electron 98.5 1E-07 3.5E-12 73.2 5.9 57 81-148 13-87 (95)
20 1frd_A Heterocyst [2Fe-2S] fer 98.5 1.2E-07 4.1E-12 73.3 5.8 57 81-148 16-90 (98)
21 1iue_A Ferredoxin; electron tr 98.5 2.1E-07 7.3E-12 72.1 6.6 57 81-148 14-88 (98)
22 1awd_A Ferredoxin; electron tr 98.4 2.7E-07 9.4E-12 70.9 6.0 52 81-139 12-81 (94)
23 1a70_A Ferredoxin; iron-sulfur 98.4 2.9E-07 1E-11 71.2 5.6 57 81-148 14-88 (97)
24 1wri_A Ferredoxin II, ferredox 98.4 5.8E-07 2E-11 68.9 7.0 51 81-139 13-81 (93)
25 1czp_A Ferredoxin I; [2Fe-2S] 98.4 4.3E-07 1.5E-11 70.3 5.8 52 81-139 16-85 (98)
26 3cf4_A Acetyl-COA decarboxylas 98.3 2E-07 6.9E-12 97.0 2.7 78 198-295 410-487 (807)
27 3unc_A Xanthine dehydrogenase/ 98.3 6.1E-07 2.1E-11 97.9 5.9 94 59-170 5-115 (1332)
28 3ah7_A [2Fe-2S]ferredoxin; [2F 98.2 3.1E-06 1E-10 67.1 6.8 40 81-127 17-58 (113)
29 1krh_A Benzoate 1,2-dioxygenas 98.2 2.5E-06 8.6E-11 79.4 7.3 52 81-139 16-89 (338)
30 1l5p_A Ferredoxin; [2Fe-2S] cl 98.2 2.4E-06 8.3E-11 65.5 5.7 55 79-139 10-84 (93)
31 1i7h_A Ferredoxin; 2Fe-2S,elec 98.1 2.2E-06 7.6E-11 67.8 5.2 39 81-126 17-56 (111)
32 3i9v_9 NADH-quinone oxidoreduc 98.1 3.2E-07 1.1E-11 77.9 -0.9 107 154-277 5-112 (182)
33 2wlb_A ETP1-FD, electron trans 98.0 6.1E-06 2.1E-10 64.2 5.7 41 80-127 15-56 (103)
34 2y5c_A Adrenodoxin-like protei 97.9 2.2E-05 7.7E-10 61.7 6.0 55 56-126 2-57 (109)
35 1doi_A 2Fe-2S ferredoxin; halo 97.8 2.4E-05 8.2E-10 63.7 6.1 39 82-127 39-78 (128)
36 2bt6_A Adrenodoxin 1; rutheniu 97.8 3.1E-05 1E-09 60.8 6.0 55 58-126 5-60 (108)
37 2fdn_A Ferredoxin; electron tr 97.7 1.2E-05 4.2E-10 54.7 1.4 47 202-277 5-51 (55)
38 1b9r_A Protein (terpredoxin); 97.6 4.8E-05 1.6E-09 59.3 3.8 40 81-126 13-53 (105)
39 1rgv_A Ferredoxin; electron tr 97.6 5.7E-05 2E-09 55.4 3.9 49 201-278 4-58 (80)
40 2fgo_A Ferredoxin; allochromat 97.5 5.3E-05 1.8E-09 55.9 3.4 48 201-277 4-57 (82)
41 1jb0_C Photosystem I iron-sulf 97.5 1.3E-05 4.4E-10 58.6 -0.3 57 201-278 6-62 (80)
42 2zvs_A Uncharacterized ferredo 97.5 4.1E-05 1.4E-09 57.0 2.3 47 201-276 4-57 (85)
43 1xer_A Ferredoxin; electron tr 97.5 1.4E-05 4.9E-10 61.4 -0.3 60 198-277 38-97 (103)
44 1rof_A Ferredoxin; electron tr 97.5 4.4E-05 1.5E-09 52.3 2.1 51 200-277 5-55 (60)
45 3eun_A Ferredoxin; electron tr 97.4 3.1E-05 1E-09 57.4 1.2 50 200-278 3-58 (82)
46 7fd1_A FD1, protein (7-Fe ferr 97.4 2.8E-05 9.6E-10 60.4 0.4 49 201-278 4-54 (106)
47 1bc6_A 7-Fe ferredoxin; electr 97.4 7.6E-05 2.6E-09 54.4 2.7 49 201-278 4-54 (77)
48 3lxf_A Ferredoxin; iron, iron- 97.4 0.00026 9E-09 55.2 6.0 43 79-127 11-54 (104)
49 1hfe_L Protein (Fe-only hydrog 97.4 5E-05 1.7E-09 73.5 1.9 68 197-291 27-96 (421)
50 3hui_A Ferredoxin; cytochrome 97.4 0.00029 9.8E-09 57.1 6.0 55 57-126 19-74 (126)
51 1dwl_A Ferredoxin I; electron 97.3 9.7E-05 3.3E-09 50.3 2.5 52 200-277 4-55 (59)
52 3zyv_A AOH1; oxidoreductase, m 97.3 0.00018 6.2E-09 78.7 5.8 92 59-167 9-116 (1335)
53 1xlq_A Putidaredoxin, PDX; [2F 97.3 0.00029 1E-08 54.8 5.2 41 80-126 12-53 (106)
54 1uwm_A Ferredoxin VI, FDVI; el 97.2 0.00029 1E-08 54.8 4.7 41 80-126 12-53 (106)
55 1h98_A Ferredoxin; electron tr 97.2 4.9E-05 1.7E-09 55.6 -0.3 49 201-278 4-54 (78)
56 3zyy_X Iron-sulfur cluster bin 97.2 0.00064 2.2E-08 68.8 7.5 52 81-139 13-83 (631)
57 1f2g_A Ferredoxin II; electron 97.2 4.3E-05 1.5E-09 52.3 -0.7 51 200-277 4-54 (58)
58 2v2k_A Ferredoxin; iron, trans 97.1 9.8E-05 3.4E-09 57.0 0.4 49 201-278 4-54 (105)
59 2pia_A Phthalate dioxygenase r 97.0 0.00062 2.1E-08 62.9 5.5 40 82-128 248-288 (321)
60 1dax_A Ferredoxin I; electron 96.8 7.1E-05 2.4E-09 52.3 -2.0 52 200-277 6-58 (64)
61 3n9z_C Adrenodoxin; cytochrome 96.8 0.00025 8.6E-09 57.2 0.7 41 81-126 18-59 (123)
62 1y56_A Hypothetical protein PH 96.8 0.0012 4E-08 64.6 5.2 65 57-139 13-81 (493)
63 3gyx_B Adenylylsulfate reducta 96.7 0.00021 7.2E-09 60.5 -0.6 53 200-278 4-61 (166)
64 2c42_A Pyruvate-ferredoxin oxi 96.7 0.00024 8.3E-09 77.1 -0.4 20 200-219 683-702 (1231)
65 1jnr_B Adenylylsulfate reducta 96.6 0.00024 8.1E-09 59.1 -0.6 52 200-277 5-61 (150)
66 1iqz_A Ferredoxin; iron-sulfer 96.6 0.00016 5.4E-09 53.2 -1.7 17 261-277 49-65 (81)
67 1sj1_A Ferredoxin; thermostabi 96.2 0.00029 1E-08 49.0 -2.3 18 200-217 6-23 (66)
68 1ti6_B Pyrogallol hydroxytrans 96.1 0.0015 5E-08 59.7 1.3 50 198-278 92-154 (274)
69 2ivf_B Ethylbenzene dehydrogen 96.0 0.001 3.4E-08 63.0 -0.6 19 260-278 208-235 (352)
70 2ivf_B Ethylbenzene dehydrogen 95.9 0.00053 1.8E-08 64.8 -2.8 54 198-278 144-199 (352)
71 2vpz_B NRFC protein; oxidoredu 95.8 0.0024 8.1E-08 55.2 1.4 18 261-278 114-140 (195)
72 1q16_B Respiratory nitrate red 95.7 0.0016 5.5E-08 64.3 -0.4 48 199-277 211-267 (512)
73 1kqf_B FDH-N beta S, formate d 95.6 0.0017 6E-08 59.7 -0.4 49 199-278 127-184 (294)
74 1gte_A Dihydropyrimidine dehyd 95.2 0.00093 3.2E-08 71.2 -4.2 51 200-277 948-1001(1025)
75 2vpz_B NRFC protein; oxidoredu 95.2 0.0029 1E-07 54.6 -0.4 50 199-276 52-103 (195)
76 1h0h_B Formate dehydrogenase ( 95.1 0.0054 1.8E-07 53.7 1.0 62 199-291 102-178 (214)
77 1q16_B Respiratory nitrate red 94.8 0.0053 1.8E-07 60.7 0.2 54 198-278 177-232 (512)
78 1kqf_B FDH-N beta S, formate d 94.7 0.004 1.4E-07 57.2 -0.8 51 200-278 95-148 (294)
79 2gag_A Heterotetrameric sarcos 94.6 0.049 1.7E-06 57.6 7.1 67 57-139 20-100 (965)
80 1ti6_B Pyrogallol hydroxytrans 94.6 0.007 2.4E-07 55.1 0.5 51 199-278 62-114 (274)
81 1h0h_B Formate dehydrogenase ( 91.9 0.0074 2.5E-07 52.8 -3.8 53 199-278 66-125 (214)
82 2fgo_A Ferredoxin; allochromat 90.1 0.11 3.7E-06 37.6 1.6 17 261-277 6-22 (82)
83 2fdn_A Ferredoxin; electron tr 90.0 0.12 4E-06 34.3 1.6 17 261-277 6-22 (55)
84 1rgv_A Ferredoxin; electron tr 89.7 0.11 3.8E-06 37.4 1.3 19 260-278 5-23 (80)
85 3eun_A Ferredoxin; electron tr 89.6 0.12 4.2E-06 37.4 1.6 18 260-277 5-22 (82)
86 2gmh_A Electron transfer flavo 89.5 0.042 1.4E-06 54.8 -1.5 20 259-278 549-568 (584)
87 2zvs_A Uncharacterized ferredo 89.4 0.12 4E-06 37.8 1.3 18 261-278 6-23 (85)
88 1jb0_C Photosystem I iron-sulf 88.7 0.11 3.7E-06 37.1 0.7 18 261-278 8-25 (80)
89 1rof_A Ferredoxin; electron tr 87.6 0.18 6.1E-06 33.6 1.2 18 261-278 8-25 (60)
90 1xer_A Ferredoxin; electron tr 87.6 0.14 4.8E-06 38.5 0.7 18 261-278 43-60 (103)
91 3mm5_A Sulfite reductase, diss 87.0 0.1 3.4E-06 50.3 -0.5 18 260-277 283-300 (418)
92 1f2g_A Ferredoxin II; electron 87.0 0.13 4.5E-06 34.3 0.2 17 261-277 6-22 (58)
93 1dax_A Ferredoxin I; electron 86.8 0.16 5.3E-06 34.7 0.5 16 261-277 9-24 (64)
94 3i9v_9 NADH-quinone oxidoreduc 86.2 0.2 6.7E-06 41.6 0.9 18 260-277 50-67 (182)
95 1iqz_A Ferredoxin; iron-sulfer 85.3 0.21 7.2E-06 36.0 0.5 16 260-275 8-23 (81)
96 7fd1_A FD1, protein (7-Fe ferr 83.4 0.34 1.2E-05 36.8 1.0 19 201-219 35-53 (106)
97 1tyg_B YJBS; alpha beta barrel 83.3 2.4 8.2E-05 31.6 5.7 60 57-148 18-81 (87)
98 3vr8_B Iron-sulfur subunit of 82.4 0.62 2.1E-05 42.4 2.5 30 259-288 178-214 (282)
99 2v2k_A Ferredoxin; iron, trans 82.3 0.4 1.4E-05 36.2 1.1 19 201-219 35-53 (105)
100 1bc6_A 7-Fe ferredoxin; electr 81.7 0.49 1.7E-05 33.5 1.3 18 260-277 5-24 (77)
101 1dwl_A Ferredoxin I; electron 81.5 0.5 1.7E-05 31.1 1.2 18 260-277 6-23 (59)
102 1ep3_B Dihydroorotate dehydrog 79.3 0.82 2.8E-05 40.2 2.2 25 111-135 224-251 (262)
103 1sj1_A Ferredoxin; thermostabi 79.3 0.43 1.5E-05 32.2 0.3 18 260-277 8-25 (66)
104 2l32_A Small archaeal modifier 79.0 1.6 5.6E-05 31.4 3.3 46 59-131 2-47 (74)
105 1h98_A Ferredoxin; electron tr 79.0 0.49 1.7E-05 33.7 0.5 17 261-277 6-24 (78)
106 2wdq_B Succinate dehydrogenase 77.4 0.74 2.5E-05 40.2 1.3 19 201-219 202-220 (238)
107 2k5p_A THis protein, thiamine- 77.4 4.5 0.00015 29.3 5.4 53 79-148 8-63 (78)
108 2h88_B Succinate dehydrogenase 76.2 0.82 2.8E-05 40.5 1.3 19 201-219 211-229 (252)
109 3rpf_C Molybdopterin convertin 75.8 8.1 0.00028 27.2 6.3 68 59-149 2-69 (74)
110 2vdc_G Glutamate synthase [NAD 75.6 1.3 4.4E-05 42.6 2.5 29 260-288 19-49 (456)
111 1kf6_B Fumarate reductase iron 74.7 0.99 3.4E-05 39.5 1.4 19 201-219 200-218 (243)
112 2q5w_D Molybdopterin convertin 74.5 4.5 0.00015 28.5 4.7 54 81-148 18-71 (77)
113 1jnr_B Adenylylsulfate reducta 74.0 0.56 1.9E-05 38.4 -0.4 19 201-219 43-61 (150)
114 2l05_A Serine/threonine-protei 73.7 13 0.00043 28.2 7.0 75 60-155 18-95 (95)
115 2bs2_B Quinol-fumarate reducta 73.2 1.1 3.9E-05 39.1 1.4 20 200-219 203-222 (241)
116 2kl0_A Putative thiamin biosyn 72.5 5.5 0.00019 28.4 4.7 42 89-147 14-58 (73)
117 3u7z_A Putative metal binding 72.4 4.5 0.00015 31.1 4.4 37 55-100 4-40 (101)
118 3gyx_B Adenylylsulfate reducta 72.2 0.67 2.3E-05 38.6 -0.4 19 201-219 42-60 (166)
119 3cf4_A Acetyl-COA decarboxylas 72.1 1.5 5.3E-05 45.5 2.2 26 260-285 414-439 (807)
120 3i9v_1 NADH-quinone oxidoreduc 70.9 0.62 2.1E-05 45.0 -1.0 73 201-292 349-423 (438)
121 2hj1_A Hypothetical protein; s 70.2 11 0.00036 28.6 6.1 50 79-139 26-76 (97)
122 3or1_B Sulfite reductase beta; 69.7 1.2 4E-05 42.3 0.7 18 260-277 255-272 (386)
123 1hfe_L Protein (Fe-only hydrog 69.3 1.4 4.9E-05 42.1 1.2 20 201-220 62-81 (421)
124 3mm5_B Sulfite reductase, diss 67.5 1.4 4.7E-05 41.4 0.6 18 260-277 238-255 (366)
125 3ny5_A Serine/threonine-protei 66.8 29 0.001 26.2 7.8 77 59-156 13-92 (96)
126 3hvz_A Uncharacterized protein 65.8 12 0.00041 27.1 5.4 60 63-148 7-66 (78)
127 1f0z_A THis protein; ubiquitin 65.1 6.4 0.00022 27.2 3.6 41 83-139 10-53 (66)
128 3or1_B Sulfite reductase beta; 62.8 1.7 5.7E-05 41.2 0.2 21 199-219 252-272 (386)
129 3po0_A Small archaeal modifier 61.2 16 0.00054 26.4 5.4 65 80-149 19-84 (89)
130 1vjk_A Molybdopterin convertin 61.0 18 0.00063 26.8 5.9 84 57-149 9-93 (98)
131 2c42_A Pyruvate-ferredoxin oxi 60.4 2.2 7.5E-05 46.4 0.7 18 260-277 685-702 (1231)
132 3mm5_B Sulfite reductase, diss 59.5 1.7 5.7E-05 40.8 -0.4 22 198-219 234-255 (366)
133 1rrb_A RAF-1 RBD, RAF proto-on 57.5 16 0.00053 28.3 4.8 76 61-157 20-101 (107)
134 2g1e_A Hypothetical protein TA 57.4 4.6 0.00016 29.3 1.8 61 84-149 20-85 (90)
135 1wxm_A A-RAF proto-oncogene se 56.0 48 0.0016 24.6 7.1 64 79-154 18-84 (86)
136 3mm5_A Sulfite reductase, diss 55.9 2 7E-05 41.2 -0.5 21 199-219 280-300 (418)
137 3or1_A Sulfite reductase alpha 54.1 2.8 9.5E-05 40.5 0.1 18 260-277 300-317 (437)
138 3c8y_A Iron hydrogenase 1; dit 53.6 2.4 8.2E-05 42.1 -0.4 21 200-220 185-205 (574)
139 2cu3_A Unknown function protei 51.9 24 0.00083 23.9 4.8 47 83-148 9-58 (64)
140 3kvp_A Uncharacterized protein 50.8 6.3 0.00022 28.1 1.5 12 61-72 39-50 (72)
141 1rws_A Hypothetical protein PF 46.9 16 0.00054 26.0 3.2 40 83-139 25-64 (77)
142 2gmh_A Electron transfer flavo 46.7 3.6 0.00012 40.7 -0.4 20 200-219 548-567 (584)
143 3or1_A Sulfite reductase alpha 46.3 3.7 0.00013 39.6 -0.4 23 197-219 295-317 (437)
144 3j16_B RLI1P; ribosome recycli 46.2 5 0.00017 40.2 0.5 18 260-277 52-69 (608)
145 2vdc_G Glutamate synthase [NAD 45.7 4.9 0.00017 38.4 0.4 22 198-219 15-38 (456)
146 1fm0_D Molybdopterin convertin 45.4 27 0.00092 24.5 4.3 59 80-149 18-76 (81)
147 1gte_A Dihydropyrimidine dehyd 44.3 8.2 0.00028 40.9 1.8 29 260-288 76-106 (1025)
148 1wgk_A Riken cDNA 2900073H19 p 43.1 56 0.0019 25.2 6.1 82 59-149 13-103 (114)
149 1ryj_A Unknown; beta/alpha pro 38.8 93 0.0032 21.3 6.4 60 60-148 5-64 (70)
150 2pmv_A Gastric intrinsic facto 38.3 30 0.001 32.8 4.5 29 81-111 315-343 (399)
151 3i9v_3 NADH-quinone oxidoreduc 35.1 6.9 0.00024 40.2 -0.5 18 203-220 218-235 (783)
152 2pa8_D DNA-directed RNA polyme 34.9 7.7 0.00026 34.5 -0.2 33 76-110 10-42 (265)
153 2l52_A Methanosarcina acetivor 34.0 61 0.0021 24.0 4.9 58 89-149 27-94 (99)
154 3j16_B RLI1P; ribosome recycli 33.3 7.2 0.00025 39.0 -0.7 19 201-219 51-69 (608)
155 2qjl_A URM1, ubiquitin-related 30.6 1.3E+02 0.0044 22.0 6.2 82 59-149 3-94 (99)
156 2pa8_D DNA-directed RNA polyme 27.7 9 0.00031 34.1 -1.0 17 201-217 199-215 (265)
157 2bb6_A TCII, TC II, transcobal 26.8 73 0.0025 30.3 5.1 57 59-128 318-374 (414)
158 3dwg_C 9.5 kDa culture filtrat 24.4 1.1E+02 0.0037 22.0 4.7 58 89-149 25-88 (93)
159 2kmm_A Guanosine-3',5'-BIS(dip 24.4 50 0.0017 22.4 2.7 41 84-139 14-54 (73)
160 3bk7_A ABC transporter ATP-bin 23.9 19 0.00066 35.8 0.5 18 260-277 66-83 (607)
161 3bk7_A ABC transporter ATP-bin 20.5 17 0.00058 36.2 -0.7 16 202-217 66-81 (607)
No 1
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=100.00 E-value=9.4e-62 Score=449.27 Aligned_cols=241 Identities=57% Similarity=1.057 Sum_probs=217.3
Q ss_pred ccceeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEecccc
Q 045926 55 VKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACL 134 (302)
Q Consensus 55 ~~~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~ 134 (302)
..+++++|+||||||+.++++|||++|+|+++++|+||||||++|+.++||+|+|+.+|+.|+||+|+|+|||++++||.
T Consensus 31 ~~~~~~~~~I~R~~p~~~~~~p~~~~~~v~v~~~~~tlLdaL~~i~~~~~ptl~~~~~C~~G~CGsC~V~InG~~~laC~ 110 (282)
T 3vr8_B 31 TGKRIKTFEIYRFNPEEPGAKPKLQKFDVDLDKCGTMVLDALIKIKNEVDPTLTFRRSCREGICGSCAMNIAGENTLACI 110 (282)
T ss_pred CCCeeEEEEEEEeCCCCCCCCCCcEEEEEEeCCCCCcHHHHHHhcCcccCCceeecCCCCCCCCCCCEEEECCEEecchh
Confidence 45678999999999997788999999999997658999999999997789999999999999999999999999999999
Q ss_pred ccccCCCCCceEEccCCCchhhhhhhhccchhhhhccccccccccCCCCC-CCccccCChhHHhhccccccCcccCcccC
Q 045926 135 KPIDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVPK-DGREYRQSPADRKKLDGLYECILCACCTT 213 (302)
Q Consensus 135 t~v~~~~~~~~~Iepl~~~~vikDLvvD~~~~~~~~~~~~~~l~~~~~~~-~~~e~~~s~~~~~~~~~~~~CI~CG~C~~ 213 (302)
|++.+..++.++||||++||+|||||||+++||++|++++||+......+ ...+++|++++++.++++..||+||+|++
T Consensus 111 t~v~~~~~~~~tIepL~~~pVikDLvvD~~~f~~~~~~v~p~l~~~~~~~~~~~~~~qs~~~~~~~~~~~~CI~CG~C~~ 190 (282)
T 3vr8_B 111 CNIDQNTSKTTKIYPLPHMFVIKDLVPDMNLFYAQYASIQPWLQKKTKINLGEKQQYQSIKEQEKLDGLYECILCACCSA 190 (282)
T ss_pred hhHhHhcCCcEEeccCCCCceeeccccccHHHHHHHHHHhhhcCCCCCCCCCchhcccCHHHHHHHHhhhhCcccCcCcc
Confidence 99986556789999999999999999999999999999999998765432 24578899999999999999999999999
Q ss_pred CCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCCCHHHHHHHHHHHHhhc
Q 045926 214 SCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLS 293 (302)
Q Consensus 214 aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~ 293 (302)
+||++++++++|+||+++++++|++.++++....++++.+.+.. ++|.|++||+|+++||+||++.++|..+|+.+++.
T Consensus 191 aCP~~~~~~~~~lGP~~li~a~r~~~d~rd~~~~erl~~l~~~~-~l~~C~~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~ 269 (282)
T 3vr8_B 191 SCPSYWWNADKYLGPAVLMQAYRWIIDSRDDSAAERLARMQDGF-SAFKCHTIMNCTKTCPKHLNPARAIGEIKMLLTKM 269 (282)
T ss_pred cCCceeccCCcCCCHHHHHHHHHHHhCCcccchHHHHHHHhhcC-CcccChhhCCccccCcCCCCHHHHHHHHHHHHHHh
Confidence 99999988788999999999999988988866667776654444 89999999999999999999999999999999876
Q ss_pred CCc
Q 045926 294 QPM 296 (302)
Q Consensus 294 ~~~ 296 (302)
+.+
T Consensus 270 ~~k 272 (282)
T 3vr8_B 270 KTK 272 (282)
T ss_pred ccC
Confidence 544
No 2
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=100.00 E-value=4.9e-55 Score=399.11 Aligned_cols=239 Identities=64% Similarity=1.159 Sum_probs=207.8
Q ss_pred ceeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEecccccc
Q 045926 57 KVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKP 136 (302)
Q Consensus 57 ~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~ 136 (302)
.++++|+||||||+.+..+|||++|+|+++++|+||||||++++.+++|+|+|+.+|+.|+||+|+|+|||++++||.|+
T Consensus 9 ~~~~~~~i~R~~~~~~~~~~~~~~~~v~~~~~~~tlLd~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i~G~~~~aC~~~ 88 (252)
T 2h88_B 9 SRIKKFSIYRWDPDKPGDKPRMQTYEVDLNKCGPMVLDALIKIKNELDSTLTFRRSCREGICGSCAMNIAGGNTLACTKK 88 (252)
T ss_dssp CCEEEEEEEECCTTSTTSCCEEEEEEEEGGGSCSBHHHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEETTEEEEGGGSB
T ss_pred CceEEEEEEEeCCCCCCCCceEEEEEEecCCCCChHHHHHHHhCcccCCCccccCCCCCCCCCCCEEEECCcEEccccCC
Confidence 46799999999999843489999999999765899999999998767999999999999999999999999999999999
Q ss_pred ccCCCCCceEEccCCCchhhhhhhhccchhhhhccccccccccCCCCCC-CccccCChhHHhhccccccCcccCcccCCC
Q 045926 137 IDGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVPKD-GREYRQSPADRKKLDGLYECILCACCTTSC 215 (302)
Q Consensus 137 v~~~~~~~~~Iepl~~~~vikDLvvD~~~~~~~~~~~~~~l~~~~~~~~-~~e~~~s~~~~~~~~~~~~CI~CG~C~~aC 215 (302)
+.++.++.++||||++||+++||+||+++|++++++++||+........ ..+.+++++++..+.+...||+||.|+.+|
T Consensus 89 ~~~~~g~~~~iepl~~~pvikDLvvD~~~~~~~~~~i~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~Ci~CG~C~~~C 168 (252)
T 2h88_B 89 IDPDLSKTTKIYPLPHMYVVKDLVPDLSNFYAQYKSIEPYLKKKDESKQGKEQYLQSIEDRQKLDGLYECILCACCSTSC 168 (252)
T ss_dssp CCCCTTSCEEEECSTTCBEEETTEECCHHHHHHHHHTCCSCCCSCCTTTTSSCCCCCHHHHHTTTTTTTCCCCCTTGGGC
T ss_pred HhHcCCCceEEecccCCCccccceeccHHHHHHhhhccCccccCCCCCCccccccCCHHHHHHhHhHHhchhhCcchhhC
Confidence 9987667899999999999999999999999999999999976543211 234778999999999999999999999999
Q ss_pred CCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCCCHHHHHHHHHHHHhhcCC
Q 045926 216 PSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQP 295 (302)
Q Consensus 216 P~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~~~ 295 (302)
|++.++++.|+||+.++++++++.++++....+++..+.+.. ++|.|++||+|+++||++|++.++|..||+.+++++.
T Consensus 169 P~~~~~~~~~lgP~~~~~~~r~~~~~r~~~~~~r~~~~~~~~-~~~~C~~Cg~C~~~CP~~i~~~~~i~~lr~~~~~~g~ 247 (252)
T 2h88_B 169 PSYWWNGDKYLGPAVLMQAYRWMIDSRDDYTEERLAQLQDPF-SLYRCHTIMNCTRTCPKGLNPGKAIAEIKKMMATYKE 247 (252)
T ss_dssp HHHHHHTTTCCHHHHHHHHHHHHTCTTCCCHHHHHHTTCSTT-TTTTCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHCC-
T ss_pred CCCccCCCCcCCHHHHHHHHHHhhCCcccchHHHHHHHhccc-CCCcCccccchhhhcCCCCCHHHHHHHHHHHHHHcCC
Confidence 999876667999999999999888887754455554443223 7899999999999999999999999999999988765
Q ss_pred c
Q 045926 296 M 296 (302)
Q Consensus 296 ~ 296 (302)
.
T Consensus 248 ~ 248 (252)
T 2h88_B 248 K 248 (252)
T ss_dssp -
T ss_pred C
Confidence 3
No 3
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=100.00 E-value=6.7e-53 Score=382.01 Aligned_cols=234 Identities=26% Similarity=0.558 Sum_probs=203.2
Q ss_pred eeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccc
Q 045926 58 VMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPI 137 (302)
Q Consensus 58 ~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v 137 (302)
.+++|+||||||+.+.++|||++|+|++++ |+||||||++++.+++|+|+|+.+|+.|+||+|+|+|||++++||+|++
T Consensus 3 ~~~~~~i~R~~~~~~~~~~~~~~~~v~~~~-~~tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i~G~~~~aC~~~~ 81 (241)
T 2bs2_B 3 RMLTIRVFKYDPQSAVSKPHFQEYKIEEAP-SMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMINGRPSLACRTLT 81 (241)
T ss_dssp CEEEEEEEECCTTCTTCCCEEEEEEEECCT-TCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEETTEEEEGGGCBG
T ss_pred ceEEEEEEEeCCCCCCCCceEEEEEEeCCC-CChHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEECCCeecchhCcH
Confidence 468999999999984379999999999988 9999999999987789999999999999999999999999999999999
Q ss_pred cCCCCCceEEccCCCchhhhhhhhccchhhhhc-cccccccccCCCCCCCcccc-CChhHHhhccccccCcccCcccCCC
Q 045926 138 DGDTSKPTIITPLPHMFVIKDLVVDLTNFYQQY-KSIEPWLKTNMVPKDGREYR-QSPADRKKLDGLYECILCACCTTSC 215 (302)
Q Consensus 138 ~~~~~~~~~Iepl~~~~vikDLvvD~~~~~~~~-~~~~~~l~~~~~~~~~~e~~-~s~~~~~~~~~~~~CI~CG~C~~aC 215 (302)
.++.|++++||||++||+++||+||+++|++++ +.+++|+..........+.. +++++...+.+...||+||+|+.+|
T Consensus 82 ~~~~g~~~~ie~l~~~pvikDLvvD~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~C 161 (241)
T 2bs2_B 82 KDFEDGVITLLPLPAFKLIKDLSVDTGNWFNGMSQRVESWIHAQKEHDISKLEERIEPEVAQEVFELDRCIECGCCIAAC 161 (241)
T ss_dssp GGCTTSEEEEECCTTSEEEETTEEECHHHHHHHHHHTTCSCCCSSCCCTTSCCCCCCHHHHHHHHHHHTCCCCCHHHHTC
T ss_pred hHcCCCeEEEecCCCCCcceeceeeCHHHHHHHHHHhcCeeccCCCCCCccccccCCHHHHHHhhhhhhhhccCcCcccC
Confidence 987566799999999999999999999999999 99999997654332223343 8888888888999999999999999
Q ss_pred CCcccCCCCcccHHHHHHHHHHhccC-cchhHHHHHHHhhhcccccccCcccccccccCCCCCCHHHHHHHHHHHHhhcC
Q 045926 216 PSYWWNPEEYLGPAALLHAYRWICDS-RDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQ 294 (302)
Q Consensus 216 P~~~~~~~~~lgP~~l~~a~r~~~d~-rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~~ 294 (302)
|++.++. .|+||+++++++++..++ ++....+++..+.+.. ++|.|+.||+|+++||++|++.++|..+|+.++++|
T Consensus 162 P~~~~~~-~~~~p~~~~~~~~~~~~~~r~~~~~~~~~~~~~~~-~~~~C~~Cg~C~~vCP~~i~~~~~i~~lr~~~~~~g 239 (241)
T 2bs2_B 162 GTKIMRE-DFVGAAGLNRVVRFMIDPHDERTDEDYYELIGDDD-GVFGCMTLLACHDVCPKNLPLQSKIAYLRRKMVSVN 239 (241)
T ss_dssp HHHHHCT-TCCHHHHHHHHHHHHTCTTCCCCHHHHHHHHCSTT-TGGGCCCCCHHHHHCTTCCCHHHHHHHHHHHHTTCC
T ss_pred CCCccCC-CCCCHHHHHHHHHHhhCccccccHHHHHHHHhccc-CcccCcccChhhHhcCCCCChHHHHHHHHHHHHHhc
Confidence 9998643 689999999999987776 5544445555443233 789999999999999999999999999999998766
No 4
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=100.00 E-value=1.7e-50 Score=365.37 Aligned_cols=233 Identities=51% Similarity=0.993 Sum_probs=199.6
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCC-chhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccc
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSEC-GPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPI 137 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~-g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v 137 (302)
.++|+||||||++ +++|||++|+|+++++ |+||||||++++.+ ||+|+|+.+|+.|+||+|+|+|||+++|||.|++
T Consensus 2 ~~~~~i~R~~~~~-~~~~~~~~~~v~~~~~~~~tll~~l~~~~~~-~~~l~~~~~C~~g~Cg~C~v~v~G~~~laC~~~~ 79 (238)
T 2wdq_B 2 RLEFSIYRYNPDV-DDAPRMQDYTLEADEGRDMMLLDALIQLKEK-DPSLSFRRSCREGVCGSDGLNMNGKNGLACITPI 79 (238)
T ss_dssp EEEEEEEECCTTT-CSSCEEEEEEEECCTTCCCBHHHHHHHHHHH-CTTCCCCCSSSSSSSCTTEEEETTEEEEGGGCBG
T ss_pred eEEEEEEEcCCCC-CCCCceEEEEeecCCCCCChHHHHHHHhccc-CCCccccccCCCCCCCCCEEEECCEEEcccccch
Confidence 3899999999998 6799999999999753 79999999999865 9999999999999999999999999999999999
Q ss_pred cC--CCCCceEEccCCCchhhhhhhhccchhhhhccccccccccCCCCCCCccccCChhHHhhccccccCcccCcccCCC
Q 045926 138 DG--DTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSC 215 (302)
Q Consensus 138 ~~--~~~~~~~Iepl~~~~vikDLvvD~~~~~~~~~~~~~~l~~~~~~~~~~e~~~s~~~~~~~~~~~~CI~CG~C~~aC 215 (302)
.+ ..+..++||||.+||+|+||++|++.++++++++.+|+.....+....++.++++++..+++..+||+||+|+.+|
T Consensus 80 ~~~g~~~~~~~ie~l~~~pvi~dlv~d~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~C 159 (238)
T 2wdq_B 80 SALNQPGKKIVIRPLPGLPVIRDLVVDMGQFYAQYEKIKPYLLNNGQNPPAREHLQMPEQREKLDGLYECILCACCSTSC 159 (238)
T ss_dssp GGTCCTTSCEEEECCTTSBEEETTEECCHHHHHHHHHTCCSCCCCCSSCCSSSCCCCHHHHHTTTTTTTCCCCCTTGGGC
T ss_pred hhhccCCCCEEEeeCCCCcchhhceechHHHHHHHHhhcCccccCcCCCCcccccCCHHHHHHHhccccccccCCchhhC
Confidence 98 4344599999999999999999999999999999999976543311245678888889999999999999999999
Q ss_pred CCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCCCHHHHHHHHHHHHhhcC
Q 045926 216 PSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQ 294 (302)
Q Consensus 216 P~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~~ 294 (302)
|.+..+.+.|+||++++.+++++.++++....+++..+.+.. ..|.|++||+|+++||+||++.++|..+|+.+++++
T Consensus 160 P~~~~~~~~~~~p~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~C~~Cg~C~~vCP~gi~~~~~i~~lr~~~~~~~ 237 (238)
T 2wdq_B 160 PSFWWNPDKFIGPAGLLAAYRFLIDSRDTETDSRLDGLSDAF-SVFRCHSIMNCVSVCPKGLNPTRAIGHIKSMLLQRN 237 (238)
T ss_dssp HHHHHCTTTSCCHHHHHHHHHHHTCTTCCCHHHHHHTTCSTT-TTTTCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHHH
T ss_pred cCCccCCCCCCCHHHHHHHHHHHhCCcccchHHHHHHHhccC-CCCcCcccchhhhhcCCCCCHHHHHHHHHHHHHhhc
Confidence 998866556899999999998876776654344554333223 689999999999999999999999999999887653
No 5
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=100.00 E-value=7.9e-49 Score=355.54 Aligned_cols=231 Identities=33% Similarity=0.598 Sum_probs=197.4
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEecccccccc
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPID 138 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v~ 138 (302)
+++|+||||||+. +++|||+.|+|++++ |+||||||+++|.++||+|+|+.+|+.|+||+|+|+|||++++||.|++.
T Consensus 5 ~~~~~i~R~~~~~-~~~~~~~~~~~~~~~-~~tll~al~~~~~~~~p~l~~~~~c~~G~Cg~C~v~v~G~~~~aC~~~~~ 82 (243)
T 1kf6_B 5 NLKIEVVRYNPEV-DTAPHSAFYEVPYDA-TTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMVNNVPKLACKTFLR 82 (243)
T ss_dssp EEEEEEEECCTTT-CSSCEEEEEEEEECT-TCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEETTEEEEGGGCBGG
T ss_pred eEEEEEEEcCCCC-CCCCeeEEEEEecCC-CChHHHHHHHcCcccCCCcccccCCCCCcCCCCEeEECCEEEeeeeeEHh
Confidence 5999999999998 679999999999988 99999999999876799999999999999999999999999999999999
Q ss_pred CCCCCceEEccCCCchhhhhhhhccchhhhhccccccccccCCCCCCCcc-ccCChhHHhhccccccCcccCcccCCCCC
Q 045926 139 GDTSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVPKDGRE-YRQSPADRKKLDGLYECILCACCTTSCPS 217 (302)
Q Consensus 139 ~~~~~~~~Iepl~~~~vikDLvvD~~~~~~~~~~~~~~l~~~~~~~~~~e-~~~s~~~~~~~~~~~~CI~CG~C~~aCP~ 217 (302)
++. +.++|+||++|+++|||++|++.|+.++..+++|+......+ ..+ +.+++++...+.+..+||+||+|+.+||.
T Consensus 83 ~~~-~~~~i~~l~~~~~~kdl~~dl~~~~~~~~~~~~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~Ci~Cg~C~~~CP~ 160 (243)
T 1kf6_B 83 DYT-DGMKVEALANFPIERDLVVDMTHFIESLEAIKPYIIGNSRTA-DQGTNIQTPAQMAKYHQFSGCINCGLCYAACPQ 160 (243)
T ss_dssp GCT-TCEEEECCTTSCEEETTEECCHHHHHHHHHTCCSCCSCCCCG-GGCCCCCCHHHHHTTGGGGCCCCCCHHHHHCHH
T ss_pred hCC-CcEEEEecCCCCccceeEEecHHHHHHHHhcCCeeccCcCCC-ccccccCCHHHHHHhhhhhhccccCccccccCC
Confidence 853 359999999999999999999999999999999986543222 123 56777888888999999999999999999
Q ss_pred cccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCCCHHHHHHHHHHHHhhcCC
Q 045926 218 YWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMKTKHMLSQP 295 (302)
Q Consensus 218 ~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~~~~~I~~lR~~l~~~~~ 295 (302)
+..+.. |+||++++.++++..++++....+++..+.+.. +.|.|++||+|+.+||+||++.++|..+|+.+.+.+.
T Consensus 161 ~~~~~~-~~gP~~~~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~C~~Cg~C~~vCP~gi~~~~~i~~~r~~~~~~g~ 236 (243)
T 1kf6_B 161 FGLNPE-FIGPAAITLAHRYNEDSRDHGKKERMAQLNSQN-GVWSCTFVGYCSEVCPKHVDPAAAIQQGKVESSKDFL 236 (243)
T ss_dssp HHHCTT-SCCHHHHHHHHHHHTCTTCCCTHHHHHHHHSTT-TGGGCCCCCHHHHHCTTCCCHHHHHHHHHHHHHHHHH
T ss_pred CcccCC-CCCHHHHHHHHHHhhCccccchHHHHHHHhccC-CcccCcccCCcchhCCCCCCHHHHHHHHHHHHHHccC
Confidence 876443 899999999998876665533233443333223 6899999999999999999999999999998877653
No 6
>3kwl_A Uncharacterized protein; putative oxidoreductase, multidomain, unknown function; 1.94A {Helicobacter pylori}
Probab=100.00 E-value=1.8e-41 Score=337.63 Aligned_cols=199 Identities=19% Similarity=0.341 Sum_probs=173.8
Q ss_pred cccceeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccc
Q 045926 54 NVKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVAC 133 (302)
Q Consensus 54 ~~~~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC 133 (302)
+|++.+++|+||||||+. +++|||++|+|++++ ++||||||.+|+ +|+||. ||+|+|||+++||
T Consensus 19 ~~~~~~~~~~i~R~~p~~-~~~p~~~~y~v~~~~-~~~vLd~L~~ik-----~l~fr~--------sCam~ING~~~la- 82 (514)
T 3kwl_A 19 HMSVLKLHVKVFRFETNK-DYNPAYESYFLEYQE-DQYLLDLLKQLK-----GVSYSE--------NIALKINQIAVFE- 82 (514)
T ss_dssp CCCCCEEEEEEEECBTTS-CSCCEEEEEEEECCT-TCBHHHHHTTST-----TCCCCS--------SCCEEETTEEECS-
T ss_pred cccceEEEEEEEEeCCCC-CCCCceEEEEEeCCC-CCcHHHHHHHhh-----hCeeec--------cceEEECCEehhh-
Confidence 356678999999999998 779999999999988 899999999997 889886 7999999999999
Q ss_pred cccccCC---CCCceEEccCCCchhhhhhhhccchhhhhcccc---ccccccCCCCCCCccccCChhHHhhccccccCcc
Q 045926 134 LKPIDGD---TSKPTIITPLPHMFVIKDLVVDLTNFYQQYKSI---EPWLKTNMVPKDGREYRQSPADRKKLDGLYECIL 207 (302)
Q Consensus 134 ~t~v~~~---~~~~~~Iepl~~~~vikDLvvD~~~~~~~~~~~---~~~l~~~~~~~~~~e~~~s~~~~~~~~~~~~CI~ 207 (302)
.|.+.+. .+++++||||++||+|||||||+++||++|+++ +||+. +++++.++.+ |
T Consensus 83 ~t~~~~~~~~~~~~i~iePl~~~pvikDLvvD~~~f~~~~~~i~~~~p~~~--------------~~~~~~~~~~---~- 144 (514)
T 3kwl_A 83 DAKVSDLVAFFSKEWVLDPLSKRYALKDLMIDEKAVLKNYEDFFKQVPYIT--------------KGEKEELEKF---I- 144 (514)
T ss_dssp CCBHHHHHHHHCSEEEEECSCSTTEEETTEECHHHHHGGGHHHHHTCTTSC--------------HHHHHGGGGT---G-
T ss_pred hhhHHHHhhccCCcEEEEECCCCcccccceeccHHHHHHHHHhhcCCCCCC--------------HHHHHHHhhc---C-
Confidence 6777542 256899999999999999999999999999999 99983 3566666666 3
Q ss_pred cCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCCCHHHHHHHHH
Q 045926 208 CACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLDPADAIHKMK 287 (302)
Q Consensus 208 CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~~~~~I~~lR 287 (302)
.|+++||++ + ++|+||+++++++|++.|+||... +|++.+.+..+++|.|++| |+++||++|++.+.|..||
T Consensus 145 --~C~~aCp~~--~-~~f~Gpa~l~~a~r~~~d~rd~~~-~rl~~l~~~~~gv~~C~~~--C~~~CPk~i~~~~~I~~lr 216 (514)
T 3kwl_A 145 --QINFINPQT--N-PKYLGDGFFLYVKWLMKRYPTERD-RLLEMISQPESGVMNFLSV--AHYLYKNDDNIDHEIYELQ 216 (514)
T ss_dssp --GGGGTCCCC--C-TTCCCHHHHHHHHHHHHHCGGGHH-HHHHHTCCTTTSGGGCCCC--GGGBTTCCCHHHHHHHHHH
T ss_pred --hhhccCCCC--C-cccCcHHHHHHHHHHhcCCcchHH-HHHHHhhcCcccccccccc--ccccCCCCCCHHHHHHHHH
Confidence 999999994 3 679999999999999999999876 8888773222389999999 9999999999999999999
Q ss_pred HHHhhcC
Q 045926 288 TKHMLSQ 294 (302)
Q Consensus 288 ~~l~~~~ 294 (302)
+.+...+
T Consensus 217 ~~~~~~~ 223 (514)
T 3kwl_A 217 EILTNSK 223 (514)
T ss_dssp HHHHTSS
T ss_pred HHHHHhC
Confidence 9888765
No 7
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=99.83 E-value=9.4e-21 Score=161.69 Aligned_cols=144 Identities=14% Similarity=0.267 Sum_probs=109.2
Q ss_pred eeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccc
Q 045926 58 VMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPI 137 (302)
Q Consensus 58 ~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v 137 (302)
.+++|+|+. ++|++++++ ++||||+|+++. +.+.++.+|++|+||+|+|.|||++++||.|++
T Consensus 3 ~~i~~~vNG------------~~~~v~~~~-~~tLL~~Lr~~~----gl~g~k~gC~~G~CGaCtV~vdG~~v~sC~~~~ 65 (161)
T 1rm6_C 3 NILRLTLNG------------RAREDLVPD-NMLLLDYLRETV----GLTGTKQGCDGGECGACTVLVDDRPRLACSTLA 65 (161)
T ss_dssp EEEEEEETT------------EEEEEEEET-TCBHHHHHHHTT----CCTTSCCCSSSSSSCTTEEEETTEEEEGGGSBG
T ss_pred ceEEEEECC------------EEEEEecCC-cCcHHHHHHHcC----CCcccccCCCCCCCCCCEEEECCcEEechHHHH
Confidence 468899988 779998888 899999999863 346789999999999999999999999999999
Q ss_pred cCCCC-CceEEccCCCchhhhhhhhccchhhhhccccccccccCCCCCCCccccCChhHHhhccccccCcccCcccCCCC
Q 045926 138 DGDTS-KPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCP 216 (302)
Q Consensus 138 ~~~~~-~~~~Iepl~~~~vikDLvvD~~~~~~~~~~~~~~l~~~~~~~~~~e~~~s~~~~~~~~~~~~CI~CG~C~~aCP 216 (302)
.+..+ +.+|||||.+++++ ++.+...+. ..+++||.|++.
T Consensus 66 ~~~~G~~v~TiEgL~~~~~~-----------------------------------~p~q~a~~~--~~~~qCG~Ctpg-- 106 (161)
T 1rm6_C 66 HQVAGKKVETVESLATQGTL-----------------------------------SKLQAAFHE--KLGTQCGFCTPG-- 106 (161)
T ss_dssp GGGTTSEEECGGGSSBTTBC-----------------------------------CHHHHHHHH--HTCCSSCSSHHH--
T ss_pred HHhCCceEEEECCCCCCCcc-----------------------------------CHHHHHHHH--hCCCcCCCCchH--
Confidence 88544 46789999865431 111222222 246999999872
Q ss_pred CcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccC
Q 045926 217 SYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATC 273 (302)
Q Consensus 217 ~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vC 273 (302)
.++.+++++.++++ .+++++....+ . ++++|+.+..|.++|
T Consensus 107 -------------~im~a~~ll~~~~~-pt~~~i~~~l~-g-nlcRCtgy~~i~~A~ 147 (161)
T 1rm6_C 107 -------------MIMASEALLRKNPS-PSRDEIKAALA-G-NLCRCTGYVKIIKSV 147 (161)
T ss_dssp -------------HHHHHHHHHHHCSS-CCHHHHHHHTT-T-CCCSSSCSHHHHHHH
T ss_pred -------------HHHHHHHHHhcCCC-CCHHHHHHHHc-C-CeECCCCCHHHHHHH
Confidence 56788888877665 34556655443 3 799999999998765
No 8
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=99.79 E-value=4.3e-19 Score=152.44 Aligned_cols=143 Identities=16% Similarity=0.293 Sum_probs=104.6
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHc-ccccCCCcccccCCCCCccCccEEEECCEEeccccccc
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKI-KAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPI 137 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i-~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v 137 (302)
+++|+|++ +.|++++++ |+||||||++. +.. .++.+|+.|+||+|+|+|||++++||.|++
T Consensus 11 ~i~~~ing------------~~~~~~v~~-~~tlL~~Lr~~~gl~-----g~~~~C~~G~CGaC~V~vdG~~v~sC~~~~ 72 (168)
T 1t3q_A 11 RISATING------------KPRVFYVEP-RMHLADALREVVGLT-----GTKIGCEQGVCGSCTILIDGAPMRSCLTLA 72 (168)
T ss_dssp EEEEEETT------------EEEEEEECT-TSBHHHHHHHTTCCT-----TSCCSCSSSSSCTTEEEETTEEEEGGGSBG
T ss_pred eEEEEECC------------EEEEEecCC-CCcHHHHHHhcCCCC-----ccccCCCCCCCCCcEEEECCCEeechhhHH
Confidence 58888887 668888888 99999999985 421 477899999999999999999999999999
Q ss_pred cCCCC-CceEEccCCCchhhhhhhhccchhhhhccccccccccCCCCCCCccccCChhHHhhccccccCcccCcccCCCC
Q 045926 138 DGDTS-KPTIITPLPHMFVIKDLVVDLTNFYQQYKSIEPWLKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCP 216 (302)
Q Consensus 138 ~~~~~-~~~~Iepl~~~~vikDLvvD~~~~~~~~~~~~~~l~~~~~~~~~~e~~~s~~~~~~~~~~~~CI~CG~C~~aCP 216 (302)
.+..+ +.+|||||.+++.+ .+.+...+ ...+++||.|.
T Consensus 73 ~~~~G~~v~Tiegl~~~~~~-----------------------------------~~~q~a~~--~~~~~qCG~C~---- 111 (168)
T 1t3q_A 73 VQAEGCSIETVEGLSQGEKL-----------------------------------NALQDSFR--RHHALQCGFCT---- 111 (168)
T ss_dssp GGGTTCEEECGGGTCCSSSC-----------------------------------CHHHHHHH--HTTCCSSCSSH----
T ss_pred HHhCCCeEEEEcCCCCcccc-----------------------------------CHHHHHHH--HhCCCcCCCch----
Confidence 98544 45789999764310 11111211 23468999998
Q ss_pred CcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCC
Q 045926 217 SYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCP 274 (302)
Q Consensus 217 ~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP 274 (302)
|..++.+++++.++++. +.+++....+ . ++++|+.|++|+++|-
T Consensus 112 -----------pg~i~~a~~ll~~~~~p-~~~~i~~~l~-g-nlcRCt~y~~~v~A~~ 155 (168)
T 1t3q_A 112 -----------AGMLATARSILAENPAP-SRDEVREVMS-G-NLCRCTGYETIIDAIT 155 (168)
T ss_dssp -----------HHHHHHHHHHHHHCSSC-CHHHHHHHGG-G-SCCSSSCSHHHHHHHT
T ss_pred -----------HHHHHHHHHHHhcCCCC-CHHHHHHHHc-C-CcccCCCchHHHHHHH
Confidence 55678888887555542 2334433332 3 7899999999999984
No 9
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=99.77 E-value=2.5e-20 Score=193.81 Aligned_cols=181 Identities=14% Similarity=0.148 Sum_probs=106.9
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccC-CCCCccCccEEEECC----------
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRS-CREGICGSCAMNIGG---------- 127 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~-C~~g~CG~C~V~VnG---------- 127 (302)
|++|.|++ + +|++++ |+|||+|++++| +++|+|||+.. ++.|.||+|.|+|+|
T Consensus 1 mv~i~idg------------~--~~~v~~-g~til~a~~~~g-i~ip~~C~~~~~~~~G~C~~C~V~v~~~~~~~~g~~~ 64 (783)
T 3i9v_3 1 MVRVKVND------------R--IVEVPP-GTSVMDAVFHAG-YDVPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPL 64 (783)
T ss_dssp CEEEECSS------------C--EEEECT-TCBHHHHHHHTT-CCCCCSSCCTTSCCCCCSCCSEEEEECC---------
T ss_pred CeEEEECC------------E--EEEeCC-CChHHHHHHHhC-CCccccCCCCCCCCCcccCCcEEEecccccccccccc
Confidence 57888876 3 355556 999999999998 56999999987 568999999999963
Q ss_pred -------------EEeccccccccCCCCCceEEccCC-----Cchhhhhhhhccchhhh---------hcccccccccc-
Q 045926 128 -------------TNTVACLKPIDGDTSKPTIITPLP-----HMFVIKDLVVDLTNFYQ---------QYKSIEPWLKT- 179 (302)
Q Consensus 128 -------------~~~laC~t~v~~~~~~~~~Iepl~-----~~~vikDLvvD~~~~~~---------~~~~~~~~l~~- 179 (302)
++++||.|+|.+ .+.|+.-+ ....+-+|++..|+..+ .++++...+..
T Consensus 65 ~~~~G~~~~~~~~~~~~aC~t~v~~----gm~v~t~~~~~~~~r~~~le~ll~nhp~dC~~C~~~g~C~Lq~~~~~~g~~ 140 (783)
T 3i9v_3 65 LNEKGEPEIQWQPKLAASCVTAVAD----GMVVDTLSDVVREAQAGMVEFTLLNHPLDCPTCDKGGACELQDRTVEYGLY 140 (783)
T ss_dssp --------CCBCSSCEETTTCBCCS----SEEEESSSHHHHHHHHHHHHHHHTSCCCCTTTCTTGGGCHHHHHHHHHCSC
T ss_pred cccccccccccCCCcccccCCCCCC----CCEEEECCHHHHHHHHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHHhCCc
Confidence 467899999987 35554322 01123334444444322 23322111111
Q ss_pred -------------CCCCCCCcc-ccCC-hhHHhhccccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcch
Q 045926 180 -------------NMVPKDGRE-YRQS-PADRKKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDE 244 (302)
Q Consensus 180 -------------~~~~~~~~e-~~~s-~~~~~~~~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~ 244 (302)
..+++..+. .+.+ ........+.++||+||+|+.+||..+... .++ ...+..
T Consensus 141 ~~~~~~~~~~~p~~~r~~~~k~~~~~~~~~~p~i~~d~~~CI~C~~Cv~~C~~~~~~~--~i~-----------~~~~g~ 207 (783)
T 3i9v_3 141 EKYYQKGPLELPVYTRFEFTRRHVDKHHPLSPFVILDRERCIHCKRCVRYFEEVPGDE--VLD-----------FIERGV 207 (783)
T ss_dssp CCC------CCCCCCCCCSCCCCCCCSEEEETTEEECTTTCCCCCHHHHHHHHTTCCC--CCE-----------ECSCTT
T ss_pred cccccccccccccccccccccccCCcccCCCccEEEchhhCCCccHHHHHhhhhcCCc--eee-----------eecCCC
Confidence 111211111 1111 112345668899999999999997654211 111 011110
Q ss_pred hHHHHHHHhhhcccccccCcccccccccCCCCCC
Q 045926 245 LTEERLQALTEDERKLYRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 245 ~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~ 278 (302)
. . .+.... ....|++||+|+++||+|+-
T Consensus 208 ~--~---~i~~~~-~~~~C~~CG~Cv~vCP~gAl 235 (783)
T 3i9v_3 208 H--T---FIGTMD-FGLPSGFSGNITDICPVGAL 235 (783)
T ss_dssp S--C---CEECSS-TTCCSTTTTTHHHHCSSSSE
T ss_pred c--c---EEccCC-CCCCCccchhHHhhcccCce
Confidence 0 0 011011 23489999999999999985
No 10
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=99.72 E-value=3.9e-19 Score=179.05 Aligned_cols=187 Identities=15% Similarity=0.219 Sum_probs=107.8
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCC-C-CCccCccEEEECCE-Eeccccc
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSC-R-EGICGSCAMNIGGT-NTVACLK 135 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C-~-~g~CG~C~V~VnG~-~~laC~t 135 (302)
|++|+|+. +.|++++ |+|||+||+++| ..+|+||++.+| + .|.||+|.|+|||. +++||.|
T Consensus 1 mv~~~ing--------------~~v~v~~-g~tiL~a~~~~g-i~ip~lC~~~~~~~~~G~Cg~C~V~v~g~~~~~aC~t 64 (574)
T 3c8y_A 1 MKTIIING--------------VQFNTDE-DTTILKFARDNN-IDISALCFLNNCNNDINKCEICTVEVEGTGLVTACDT 64 (574)
T ss_dssp CEEEEETT--------------EEEEECC-CCBHHHHHHHTT-CCCCCSSCBTTBCCSSSCCCTTEEEETTTEEEEGGGC
T ss_pred CeEEEECC--------------EEEEeCC-CCHHHHHHHHcC-CCCCcccCCCCCCCCcccCCCCEEEeCCCcccccCCC
Confidence 47788877 4566667 999999999998 469999999987 6 89999999999998 8999999
Q ss_pred cccCCCCCceEEccCC--Cchhhhhhhhccchhhh---------hcccccccccc-C-CCC-CCCccccCChhHHhhccc
Q 045926 136 PIDGDTSKPTIITPLP--HMFVIKDLVVDLTNFYQ---------QYKSIEPWLKT-N-MVP-KDGREYRQSPADRKKLDG 201 (302)
Q Consensus 136 ~v~~~~~~~~~Iepl~--~~~vikDLvvD~~~~~~---------~~~~~~~~l~~-~-~~~-~~~~e~~~s~~~~~~~~~ 201 (302)
++.++ ....|.++.- ....+.+|+++.+++.+ .++.+.-.+.. . ..+ +..+.............+
T Consensus 65 ~v~~g-m~V~T~~~~~~~~r~~~lelll~~h~~~C~~C~~~~~C~Lq~~a~~~Gv~~~~~f~~~~~~~~~~~~~~~i~~d 143 (574)
T 3c8y_A 65 LIEDG-MIINTNSDAVNEKIKSRISQLLDIHEFKCGPCNRRENCEFLKLVIKYKARASKPFLPKDKTEYVDERSKSLTVD 143 (574)
T ss_dssp BCCTT-CEEESSCHHHHHHHHHHHHHHHTTSCCCCTTCTTTTSCHHHHHHHHHTCCCSSCCCCSCGGGGEECCSSSEEEE
T ss_pred Ccccc-eeEEecchhhhhhHHHHHHHHHhccCCCCCcCCCCcchHHHHHHHHhccCCCcCCCCCccccccccCCCcceeC
Confidence 99862 1111222211 01234444554444432 22222111111 1 111 100000011112345667
Q ss_pred cccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHH-HhhhcccccccCcccccccccCCCCCC
Q 045926 202 LYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQ-ALTEDERKLYRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 202 ~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~-~~~~~~~~~~~C~~Cg~C~~vCP~gI~ 278 (302)
.++||.||+|+.+||..+... ++.+..++... ++. ...... ....|+.||.|+.+||+++-
T Consensus 144 ~~kCi~Cg~Cv~~CP~~~~~~-----------ai~~~~~g~~~----~i~~~~~~~i-~~~~Ci~Cg~Cv~~CP~gAi 205 (574)
T 3c8y_A 144 RTKCLLCGRCVNACGKNTETY-----------AMKFLNKNGKT----IIGAEDEKCF-DDTNCLLCGQCIIACPVAAL 205 (574)
T ss_dssp GGGCCCCCHHHHHHHHHHSCC-----------CSEEEEETTEE----EEESGGGCCG-GGSSCCCCCHHHHHCSSTTE
T ss_pred cccCcCCCCccchhCchhcCC-----------ceeeccCCccc----eeccccccee-chhhCCcchhHHHhhccCCc
Confidence 889999999999999632100 00000001000 000 000011 34689999999999999864
No 11
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=99.64 E-value=9.9e-16 Score=130.67 Aligned_cols=79 Identities=13% Similarity=0.279 Sum_probs=66.4
Q ss_pred ceeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEecccccc
Q 045926 57 KVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKP 136 (302)
Q Consensus 57 ~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~ 136 (302)
..+++|+|+. ++|++++++ ++||||+|++.. +...++.+|+.|.||+|+|.|||++++||.++
T Consensus 3 ~~~i~~~vNG------------~~~~~~v~~-~~tLLd~LR~~l----gltg~k~gC~~G~CGaCtV~vdG~~v~sC~~~ 65 (163)
T 1ffv_A 3 KKIITVNVNG------------KAQEKAVEP-RTLLIHFLREEL----NLTGAHIGCETSHCGACTVDIDGRSVKSCTHL 65 (163)
T ss_dssp CEEEEEEETT------------EEEEEEECT-TCBHHHHHHHTS----CCTTSCCCCSSSCSCTTEEEETTEEEEGGGSB
T ss_pred CceEEEEECC------------EEEEEecCC-CCcHHHHHHhcC----CCcccccCCCCCCCCCCEEEECCcEecchHhh
Confidence 3468888887 678899888 899999999841 34578899999999999999999999999999
Q ss_pred ccCCCC-CceEEccCCC
Q 045926 137 IDGDTS-KPTIITPLPH 152 (302)
Q Consensus 137 v~~~~~-~~~~Iepl~~ 152 (302)
+....+ +.+|||+|.+
T Consensus 66 ~~~~~G~~I~TiEgL~~ 82 (163)
T 1ffv_A 66 AVQCDGSEVLTVEGLAN 82 (163)
T ss_dssp GGGGTTCEEECGGGTSB
T ss_pred HHHhCCceEEEECCCCC
Confidence 997545 3678999874
No 12
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=99.62 E-value=2.1e-15 Score=129.01 Aligned_cols=78 Identities=13% Similarity=0.278 Sum_probs=65.7
Q ss_pred eeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccc
Q 045926 58 VMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPI 137 (302)
Q Consensus 58 ~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v 137 (302)
.+++|+|+. +.|++++++ ++||||+|++.. +...++.+|+.|.||+|+|.|||++++||.+++
T Consensus 4 ~~i~~~vNG------------~~~~~~v~~-~~tLLd~LR~~l----gl~g~k~gC~~G~CGaCtV~vdG~~v~SC~~~~ 66 (166)
T 1n62_A 4 AHIELTING------------HPVEALVEP-RTLLIHFIREQQ----NLTGAHIGCDTSHCGACTVDLDGMSVKSCTMFA 66 (166)
T ss_dssp EEEEEEETT------------EEEEEEECT-TCBHHHHHHHTS----CCTTSCCCCSSSCSCTTEEEETTEEEEGGGSBG
T ss_pred ceEEEEECC------------EEEEEecCC-CCcHHHHHHHcC----CCCccccCCCCCCCCCCEEEECCcEEechhhhH
Confidence 468888887 678899888 899999999842 345788899999999999999999999999999
Q ss_pred cCCCC-CceEEccCCC
Q 045926 138 DGDTS-KPTIITPLPH 152 (302)
Q Consensus 138 ~~~~~-~~~~Iepl~~ 152 (302)
....+ +.+|||+|.+
T Consensus 67 ~~~~G~~V~TiEgL~~ 82 (166)
T 1n62_A 67 VQANGASITTIEGMAA 82 (166)
T ss_dssp GGGTTCEEECGGGSSC
T ss_pred HHhCCceEEEeCCCCC
Confidence 86545 4678999864
No 13
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=99.41 E-value=2.9e-13 Score=114.97 Aligned_cols=78 Identities=15% Similarity=0.308 Sum_probs=65.6
Q ss_pred eeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccc
Q 045926 58 VMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPI 137 (302)
Q Consensus 58 ~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v 137 (302)
.+++|+|++ +.|++++++ ++||||+|++. .....++.+|+.|.||+|+|.|||++++||.+++
T Consensus 4 ~~i~~~vNG------------~~~~v~v~p-~~tLLd~LR~~----lgltgtk~gC~~G~CGACtV~vdG~~v~sC~~~~ 66 (160)
T 3hrd_D 4 ITINLNLNG------------EARSIVTEP-NKRLLDLLRED----FGLTSVKEGCSEGECGACTVIFNGDPVTTCCMLA 66 (160)
T ss_dssp EEEEEEETT------------EEEEEEECS-SSBHHHHHHTT----SCCTTSCCSSSSSSSCTTEEEETTEEEEGGGSBG
T ss_pred ceEEEEECC------------EEEEEecCC-CCCHHHHHHHh----cCCCccccccCCCCCCCCEEEECCEEEEchhhhh
Confidence 468899988 678899888 89999999963 1234688999999999999999999999999999
Q ss_pred cCCCC-CceEEccCCC
Q 045926 138 DGDTS-KPTIITPLPH 152 (302)
Q Consensus 138 ~~~~~-~~~~Iepl~~ 152 (302)
....+ +.+|||+|..
T Consensus 67 ~~~~G~~I~TiEgl~~ 82 (160)
T 3hrd_D 67 GQADESTIITLEGVAE 82 (160)
T ss_dssp GGGTTEEEECGGGTSB
T ss_pred hhhCCCceEEeCCCCC
Confidence 87655 4568998864
No 14
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=99.11 E-value=4.3e-11 Score=117.49 Aligned_cols=94 Identities=18% Similarity=0.298 Sum_probs=75.0
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEE-ecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE----CCEEeccc
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHV-DLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI----GGTNTVAC 133 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v-~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V----nG~~~laC 133 (302)
+++|+|+. +.|++ ++++ ++||||+|++++. .+++.+|++|.||+|+|.| ||++++||
T Consensus 2 ~~~~~vNg------------~~~~~~~~~~-~~~Ll~~Lr~~~l-----~g~k~gC~~G~CGaCtV~v~~~~~g~~v~sC 63 (462)
T 2w3s_A 2 EIAFLLNG------------ETRRVRIEDP-TQSLLEWLRAEGL-----TGTKEGCNEGDCGACTVMIRDAAGSRAVNAC 63 (462)
T ss_dssp EEEEEETT------------EEEEEECSCT-TCBHHHHHHHTTC-----TTSCCSCSSSSSCTTEEEEEETTEEEEEETT
T ss_pred cEEEEECC------------EEEEEecCCC-CCcHHHHHHHcCC-----CccCCCCCCCCcCCcEEEEEecCCCeEEEch
Confidence 47888888 77999 7877 8999999995542 3699999999999999999 99999999
Q ss_pred cccccCCCC-CceEEccCCC----chhhhhhhhccchhhhhc
Q 045926 134 LKPIDGDTS-KPTIITPLPH----MFVIKDLVVDLTNFYQQY 170 (302)
Q Consensus 134 ~t~v~~~~~-~~~~Iepl~~----~~vikDLvvD~~~~~~~~ 170 (302)
.+++....+ +.+|||+|.+ +..++.-.++.+.+-+.|
T Consensus 64 l~~~~~~~g~~i~TiEgl~~~~~~~~~~q~a~~~~~~~QCG~ 105 (462)
T 2w3s_A 64 LMMLPQIAGKALRTIEGIAAPDGRLHPVQQAMIDHHGSQCGF 105 (462)
T ss_dssp TCBGGGGTTCEEECGGGTSCTTSCCCHHHHHHHHTTCCSSCT
T ss_pred hhhHHHhCCCcEEEECCCCCCCCCCCHHHHHHHHhCCCCCCC
Confidence 999998655 4679999974 234555556666655544
No 15
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=99.10 E-value=5.3e-11 Score=125.43 Aligned_cols=78 Identities=17% Similarity=0.356 Sum_probs=67.9
Q ss_pred eeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccc
Q 045926 58 VMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPI 137 (302)
Q Consensus 58 ~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v 137 (302)
.+++|+|+. ++|++++++ ++||||+|++.. +.++++.+|++|.||+|+|.|||++++||.+++
T Consensus 2 ~~~~~~~ng------------~~~~~~~~~-~~~ll~~Lr~~~----~l~g~k~gC~~g~CGaCtv~vdg~~~~sC~~~~ 64 (907)
T 1vlb_A 2 IQKVITVNG------------IEQNLFVDA-EALLSDVLRQQL----GLTGVKVGCEQGQCGACSVILDGKVVRACVTKM 64 (907)
T ss_dssp EEEEEEETT------------EEEEEEECT-TSBHHHHHHHTT----CCTTSCCSSSSSSSCTTEEEETTEEEEGGGCBG
T ss_pred ceEEEEECC------------EEEEEecCC-CChHHHHHHHhc----CCCeecCCCCCCCcCccEEEECCeEeechHhHH
Confidence 368899988 779999988 899999999852 457899999999999999999999999999999
Q ss_pred cCC-CC-CceEEccCCC
Q 045926 138 DGD-TS-KPTIITPLPH 152 (302)
Q Consensus 138 ~~~-~~-~~~~Iepl~~ 152 (302)
... .+ +.+|||+|..
T Consensus 65 ~~~~~g~~i~Tiegl~~ 81 (907)
T 1vlb_A 65 KRVADGAQITTIEGVGQ 81 (907)
T ss_dssp GGSCTTCEEECHHHHCB
T ss_pred HHHcCCCcEEEECCCCC
Confidence 887 65 4678999874
No 16
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=99.08 E-value=8.7e-11 Score=99.90 Aligned_cols=77 Identities=19% Similarity=0.309 Sum_probs=63.5
Q ss_pred eeEEEEEEecCCCCCCCCCceeEE-EEecCCCchhHHHHHHH-cccccCCCcccccCCCCCccCccEEEEC---------
Q 045926 58 VMKEFRIYRWNPDRPDSKPFLQSY-HVDLSECGPMVLDALQK-IKAETDSSLSYRRSCREGICGSCAMNIG--------- 126 (302)
Q Consensus 58 ~~~~~~I~r~~p~~~~~~~~~~~y-~v~~~~~g~tvLdal~~-i~~~~dptL~~~~~C~~g~CG~C~V~Vn--------- 126 (302)
.+++|.|+. +.+ .+++++ +++|||+|++ ++ -...+.+|.+|.||+|+|.||
T Consensus 3 ~~i~~~vNG------------~~~~~~~~~p-~~~Ll~~LR~~lg-----ltGtK~GC~~G~CGACTVlvd~~~~~~~~~ 64 (164)
T 3nvw_A 3 DELVFFVNG------------KKVVEKNADP-ETTLLAYLRRKLG-----LRGTKLGCGEGGCGACTVMLSKYDRLQDKI 64 (164)
T ss_dssp CCEEEEETT------------EEEEETTCCT-TCBHHHHHHHTSC-----CTTSCCSCSSSSSCTTEEEEEEEETTTTEE
T ss_pred ceEEEEECC------------EEEEEecCCC-CCCHHHHHHHHcC-----CCCcCCCcCCCCCCCCEEEEcccccccccc
Confidence 358899988 444 567777 8999999997 34 246889999999999999999
Q ss_pred -CEEeccccccccCCCC-CceEEccCCC
Q 045926 127 -GTNTVACLKPIDGDTS-KPTIITPLPH 152 (302)
Q Consensus 127 -G~~~laC~t~v~~~~~-~~~~Iepl~~ 152 (302)
|+++.||.+++....+ +.+|||.|..
T Consensus 65 ~g~~v~SCl~~a~~~~G~~I~TiEGL~~ 92 (164)
T 3nvw_A 65 IHFSANACLAPICTLHHVAVTTVEGIGS 92 (164)
T ss_dssp EEEEEETTTCBGGGCTTCEEECGGGTCC
T ss_pred CCcEEehhhhhHHHhCCcceEEecccCC
Confidence 9999999999988765 4568998863
No 17
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=99.03 E-value=1.5e-10 Score=122.04 Aligned_cols=78 Identities=18% Similarity=0.333 Sum_probs=66.5
Q ss_pred eeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccc
Q 045926 58 VMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPI 137 (302)
Q Consensus 58 ~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v 137 (302)
.+++|+|+. ++|++++++ ++||||+|++. -+..+++.+|++|.||+|+|.|||++++||.+++
T Consensus 2 ~~~~~~~ng------------~~~~~~~~~-~~~ll~~Lr~~----~~l~g~k~gC~~G~CGaCtv~vdg~~v~sC~~~~ 64 (907)
T 1dgj_A 2 ETKTLIVNG------------MARRLLVSP-NDLLVDVLRSQ----LQLTSVKVGCGKGQCGACTVILDGKVVRACIIKM 64 (907)
T ss_dssp EEEECEETT------------BCCEEEECT-TCBHHHHHHHT----TCCTTSCCSSSSSSSCTTEEEETTEEEEGGGCBG
T ss_pred ceEEEEECC------------EEEEEecCC-CCcHHHHHHHh----cCCCccCCCCCCCCcCceEEEECCeEeehhHhHH
Confidence 358888888 558888888 89999999974 1456899999999999999999999999999999
Q ss_pred cCC-CCC-ceEEccCCC
Q 045926 138 DGD-TSK-PTIITPLPH 152 (302)
Q Consensus 138 ~~~-~~~-~~~Iepl~~ 152 (302)
... .+. .+|||+|..
T Consensus 65 ~~~~~g~~i~TiEgl~~ 81 (907)
T 1dgj_A 65 SRVAENASVTTLEGIGA 81 (907)
T ss_dssp GGSCTTCEEECGGGTCB
T ss_pred HHHcCCCcEEEECCCCC
Confidence 887 664 578999974
No 18
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=98.58 E-value=5.9e-08 Score=75.16 Aligned_cols=65 Identities=18% Similarity=0.262 Sum_probs=47.3
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE-CCE---------
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI-GGT--------- 128 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V-nG~--------- 128 (302)
+.+|+|.--|+ ..+.|++.+ |.||||||++.|.. ...+|+.|.||+|.|+| +|.
T Consensus 4 ~~~v~~~~~~~---------~~~~~~~~~-g~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~~~e~~ 67 (98)
T 1jq4_A 4 VHTITAVTEDG---------ESLRFECRS-DEDVITAALRQNIF------LMSSCREGGCATCKALCSEGDYDLKGCSVQ 67 (98)
T ss_dssp EEEEEEEETTT---------EEEEEEEES-CCTHHHHHHHHTCC------CCCSCCSSCCCCCCBCEEECCCCCCCSCTT
T ss_pred cEEEEEEecCC---------CcEEEEeCC-CChHHHHHHHcCCC------CcCCCCCCCCCCCEEEEEcCccccCccccc
Confidence 56677663222 235667767 89999999998732 45678999999999998 774
Q ss_pred ----------EeccccccccC
Q 045926 129 ----------NTVACLKPIDG 139 (302)
Q Consensus 129 ----------~~laC~t~v~~ 139 (302)
.+|||.+.+..
T Consensus 68 ~L~~~~~~~g~~LaCq~~~~~ 88 (98)
T 1jq4_A 68 ALPPEEEEEGLVLLCRTYPKT 88 (98)
T ss_dssp TSCHHHHHHHCBCTTTCCSSC
T ss_pred ccCHHHhcCCcEEEeeCEECC
Confidence 36788888764
No 19
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=98.54 E-value=1e-07 Score=73.17 Aligned_cols=57 Identities=28% Similarity=0.606 Sum_probs=44.6
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEEC-CE-----------------EeccccccccCCCC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIG-GT-----------------NTVACLKPIDGDTS 142 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~Vn-G~-----------------~~laC~t~v~~~~~ 142 (302)
++|++++ |.||||||++.|.. ...+|+.|.||+|.|+|. |. .+|||.+.+..
T Consensus 13 ~~~~~~~-g~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~~~~~L~~~~~~~g~~LaC~~~~~~--- 82 (95)
T 1frr_A 13 FTLDVPE-GTTILDAAEEAGYD------LPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIPES--- 82 (95)
T ss_dssp EEEEECT-TCCHHHHHHHTTCC------CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEESS---
T ss_pred EEEEeCC-CCcHHHHHHHcCCC------CCCCCCCcCCCCCEEEEEeCCccccccccCCHHHHhCCcEEeeECEECC---
Confidence 5667777 99999999998742 445688999999999997 74 57899998865
Q ss_pred CceEEc
Q 045926 143 KPTIIT 148 (302)
Q Consensus 143 ~~~~Ie 148 (302)
.++|+
T Consensus 83 -~~~v~ 87 (95)
T 1frr_A 83 -DLVIE 87 (95)
T ss_dssp -CEEEE
T ss_pred -CEEEE
Confidence 35554
No 20
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=98.51 E-value=1.2e-07 Score=73.35 Aligned_cols=57 Identities=23% Similarity=0.452 Sum_probs=44.4
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE-CCE-----------------EeccccccccCCCC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI-GGT-----------------NTVACLKPIDGDTS 142 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V-nG~-----------------~~laC~t~v~~~~~ 142 (302)
.+|++++ |.||||||++.|.. ...+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 16 ~~~~~~~-g~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaC~~~~~~--- 85 (98)
T 1frd_A 16 TTIEIDE-ETTILDGAEENGIE------LPFSCHSGSCSSCVGKVVEGEVDQSDQIFLDDEQMGKGFALLCVTYPRS--- 85 (98)
T ss_dssp EEEEEET-TSCHHHHHHHTTCC------CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEEGGGCEESS---
T ss_pred EEEEeCC-CCcHHHHHHHcCCC------cccCCCCCCCCCCEEEEEeCCccccccccCCHHHhhCCcEEEeECEECC---
Confidence 4566667 89999999998742 44568899999999999 775 57899998865
Q ss_pred CceEEc
Q 045926 143 KPTIIT 148 (302)
Q Consensus 143 ~~~~Ie 148 (302)
.++|+
T Consensus 86 -d~~v~ 90 (98)
T 1frd_A 86 -NCTIK 90 (98)
T ss_dssp -SEEEE
T ss_pred -CEEEE
Confidence 35555
No 21
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=98.49 E-value=2.1e-07 Score=72.11 Aligned_cols=57 Identities=25% Similarity=0.498 Sum_probs=44.0
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE-CCE-----------------EeccccccccCCCC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI-GGT-----------------NTVACLKPIDGDTS 142 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V-nG~-----------------~~laC~t~v~~~~~ 142 (302)
++|++++ |.||||||++.|. ....+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 14 ~~~~~~~-g~tlL~a~~~~gi------~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~--- 83 (98)
T 1iue_A 14 KKIECNE-DEYILDASERQNV------ELPYSCRGGSCSTCAAKLVEGEVDNDDQSYLDEEQIKKKYILLCTCYPKS--- 83 (98)
T ss_dssp EEEEEET-TSCHHHHHHHTTC------CCCCSSCSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESS---
T ss_pred EEEEeCC-CCcHHHHHHHcCC------CCCCCCCCCcCCCCEEEEeeCCccccccccCCHHHHhCCeEEEeECEECC---
Confidence 5566667 8999999999873 245678999999999997 774 36899988864
Q ss_pred CceEEc
Q 045926 143 KPTIIT 148 (302)
Q Consensus 143 ~~~~Ie 148 (302)
.++|+
T Consensus 84 -d~~i~ 88 (98)
T 1iue_A 84 -DCVIE 88 (98)
T ss_dssp -CEEEE
T ss_pred -CeEEE
Confidence 35555
No 22
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=98.44 E-value=2.7e-07 Score=70.88 Aligned_cols=52 Identities=27% Similarity=0.528 Sum_probs=41.9
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE-CCE-----------------EeccccccccC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI-GGT-----------------NTVACLKPIDG 139 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V-nG~-----------------~~laC~t~v~~ 139 (302)
++|++++ |.||||||++.|. ....+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 12 ~~~~~~~-g~tlL~a~~~~gi------~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~ 81 (94)
T 1awd_A 12 ETIECPE-DTYILDAAEEAGL------DLPYSCRAGACSSCAGKVESGEVDQSDQSFLDDAQMGKGFVLTCVAYPTS 81 (94)
T ss_dssp EEEECCT-TSCHHHHHHHTTC------CCCCSSSSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESS
T ss_pred EEEEECC-CCcHHHHHHHcCC------CCCcCCCCCcCCCCEEEEEeCCcCccccccCCHHHHhCCcEEeeECEECC
Confidence 6677777 9999999999873 245678999999999998 774 36788888764
No 23
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=98.41 E-value=2.9e-07 Score=71.19 Aligned_cols=57 Identities=25% Similarity=0.426 Sum_probs=44.2
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE-CCE-----------------EeccccccccCCCC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI-GGT-----------------NTVACLKPIDGDTS 142 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V-nG~-----------------~~laC~t~v~~~~~ 142 (302)
++|++.+ |.|||+||++.|.. ...+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 14 ~~~~~~~-g~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~--- 83 (97)
T 1a70_A 14 VEFQCPD-DVYILDAAEEEGID------LPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVS--- 83 (97)
T ss_dssp EEEEEET-TSCHHHHHHHTTCC------CCCSSSSSCSSTTEEEEEESCEECTTCCSSCHHHHHHTEEEGGGCEESS---
T ss_pred EEEEeCC-CCcHHHHHHHcCCC------cccCCCCcCCCCCeEEEccCCcCccccccCCHHHhhCCeEEEeECEECC---
Confidence 5666767 89999999998732 45679999999999998 774 36799888864
Q ss_pred CceEEc
Q 045926 143 KPTIIT 148 (302)
Q Consensus 143 ~~~~Ie 148 (302)
.++|+
T Consensus 84 -d~~v~ 88 (97)
T 1a70_A 84 -DVTIE 88 (97)
T ss_dssp -CEEEE
T ss_pred -CEEEE
Confidence 35555
No 24
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=98.40 E-value=5.8e-07 Score=68.93 Aligned_cols=51 Identities=24% Similarity=0.528 Sum_probs=40.3
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE-CCE-----------------EeccccccccC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI-GGT-----------------NTVACLKPIDG 139 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V-nG~-----------------~~laC~t~v~~ 139 (302)
+.|++.+ |.||||||++.| . ...+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 13 ~~~~~~~-g~tlL~a~~~~g-~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~~~~~g~~LaCq~~~~~ 81 (93)
T 1wri_A 13 ITFDVEP-GERLIDIGSEKA-D------LPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPES 81 (93)
T ss_dssp EEEEECT-TSCHHHHHHHHS-C------CCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEESS
T ss_pred EEEEECC-CCcHHHHHHHCc-C------CCCCCCCCCCCCCEEEEecCccCccccccCCHHHHhCCcEEeeeCEECC
Confidence 6677777 999999999986 3 34578999999999998 673 25788877754
No 25
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=98.38 E-value=4.3e-07 Score=70.30 Aligned_cols=52 Identities=25% Similarity=0.560 Sum_probs=41.1
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE-CCE-----------------EeccccccccC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI-GGT-----------------NTVACLKPIDG 139 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V-nG~-----------------~~laC~t~v~~ 139 (302)
+++++.+ |.||||||++.|.. ...+|+.|.||+|.|+| +|. .+|||.+.+..
T Consensus 16 ~~~~~~~-g~tlL~a~~~~gi~------i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~ 85 (98)
T 1czp_A 16 HEIEVPD-DEYILDAAEEQGYD------LPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTS 85 (98)
T ss_dssp EEEEEET-TSCHHHHHHHTTCC------CCCSSSSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESS
T ss_pred EEEEeCC-CCCHHHHHHHcCCC------ccCCCCCCCCCCCeEEEccCCcCccccccCCHHHhhCCeEEeeeCEECC
Confidence 5566667 89999999998732 45678999999999997 674 46789888764
No 26
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=98.29 E-value=2e-07 Score=97.00 Aligned_cols=78 Identities=17% Similarity=0.377 Sum_probs=55.7
Q ss_pred hccccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCC
Q 045926 198 KLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 198 ~~~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI 277 (302)
...+...|+.||.|+.+||++. .+..++ +....++.. . +. . ..+.|+.||+|..+||+++
T Consensus 410 i~~~~~~Ci~CG~C~~~CP~~~-------~~~~il---~~~~~G~~~----~---~~--~-~~~~Ci~Cg~C~~vCP~ga 469 (807)
T 3cf4_A 410 LVNMVAKCADCGACLLACPEEI-------DIPEAM---GFAKKGDFS----Y---FE--E-IHDTCIGCRRCEQVCKKEI 469 (807)
T ss_dssp HHHHHHHCCCCCHHHHHCTTCC-------CHHHHH---HHHHTTCTH----H---HH--H-HHHHCCCCCHHHHHCTTCC
T ss_pred HHHhHHhCCCCCchhhhCCCCC-------chHHHH---HHHHcCChh----h---hh--h-chhhccchhhHHHhCCCCC
Confidence 3446789999999999999875 222222 222223211 1 11 1 3578999999999999999
Q ss_pred CHHHHHHHHHHHHhhcCC
Q 045926 278 DPADAIHKMKTKHMLSQP 295 (302)
Q Consensus 278 ~~~~~I~~lR~~l~~~~~ 295 (302)
++.+.+..+|+.+.+.+.
T Consensus 470 ~~~~~i~~~r~~l~~~~~ 487 (807)
T 3cf4_A 470 PILNVIEKIAQKQIAEEK 487 (807)
T ss_dssp CHHHHHHHHTHHHHHTCC
T ss_pred ChHHHHHHHHHHHHhccC
Confidence 999999999999887654
No 27
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=98.27 E-value=6.1e-07 Score=97.85 Aligned_cols=94 Identities=16% Similarity=0.275 Sum_probs=73.0
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEE-ecCCCchhHHHHHHH-cccccCCCcccccCCCCCccCccEEEEC----------
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHV-DLSECGPMVLDALQK-IKAETDSSLSYRRSCREGICGSCAMNIG---------- 126 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v-~~~~~g~tvLdal~~-i~~~~dptL~~~~~C~~g~CG~C~V~Vn---------- 126 (302)
.++|.|+. +.+++ ++++ .+||||+|++ ++. -..+.+|.+|.||+|+|.||
T Consensus 5 ~i~~~vNg------------~~~~~~~~~p-~~~ll~~LR~~~~l-----tgtk~gC~~g~CGaCtV~~~~~~~~~~~~~ 66 (1332)
T 3unc_A 5 ELVFFVNG------------KKVVEKNADP-ETTLLAYLRRKLGL-----RGTKLGCGEGGCGACTVMLSKYDRLQDKII 66 (1332)
T ss_dssp CEEEEETT------------EEEEETTCCT-TCBHHHHHHHTSCC-----TTSCCSCSSSSSCTTEEEEEEEETTTTEEE
T ss_pred cEEEEECC------------EEEEeecCCC-CCCHHHHHhhhcCC-----CCcCCCcCCCCCCCcEEEEecccccccccC
Confidence 58899988 56765 5777 7999999997 443 25788999999999999995
Q ss_pred CEEeccccccccCCCC-CceEEccCCC----chhhhhhhhccchhhhhc
Q 045926 127 GTNTVACLKPIDGDTS-KPTIITPLPH----MFVIKDLVVDLTNFYQQY 170 (302)
Q Consensus 127 G~~~laC~t~v~~~~~-~~~~Iepl~~----~~vikDLvvD~~~~~~~~ 170 (302)
|+++.||.+++....| +.+|||.|.. +..++.-.++.+.+-+.|
T Consensus 67 ~~~v~sCl~~~~~~~g~~i~TiEgl~~~~~~~hpvq~a~~~~~~~QCG~ 115 (1332)
T 3unc_A 67 HFSANACLAPICTLHHVAVTTVEGIGSTKTRLHPVQERIAKSHGSQCGF 115 (1332)
T ss_dssp EEEEETTTCBGGGCTTCEEECGGGTCCTTSCCCHHHHHHHHTTCCSSCT
T ss_pred CeEeehHHhhHHHhCCCEEEEeccccCCCCCcCHHHHHHHHhCCCCCCC
Confidence 8999999999988766 4568999964 334555666776665544
No 28
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=98.18 E-value=3.1e-06 Score=67.13 Aligned_cols=40 Identities=20% Similarity=0.456 Sum_probs=31.8
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCC-CCccCccEEEEC-C
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCR-EGICGSCAMNIG-G 127 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~-~g~CG~C~V~Vn-G 127 (302)
++|++.+ |.||||||++.|.. + ..+|+ .|.||+|.|+|. |
T Consensus 17 ~~v~~~~-g~tlL~aa~~~Gi~-i-----~~~C~g~G~CgtC~v~v~~G 58 (113)
T 3ah7_A 17 LTVEVKP-GTNILELAHDHHIE-M-----ESACGGVKACTTCHCIVRKG 58 (113)
T ss_dssp EEEECCT-TCBHHHHHHHTTCC-C-----CCTTCSSSSCSTTEEEEEES
T ss_pred eEEEECC-CCcHHHHHHHcCCC-C-----CcCCCCCCCcCCCEEEEcCC
Confidence 5677777 99999999998742 3 35687 699999999984 5
No 29
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=98.18 E-value=2.5e-06 Score=79.41 Aligned_cols=52 Identities=25% Similarity=0.489 Sum_probs=42.1
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE-CCEE---------------------ecccccccc
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI-GGTN---------------------TVACLKPID 138 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V-nG~~---------------------~laC~t~v~ 138 (302)
++|++.+ |.|||||+++.|.. ...+|+.|.||+|.|+| +|.. +|||.+.+.
T Consensus 16 ~~~~~~~-g~tll~a~~~~gi~------i~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~l~~~~~~~g~~LaCq~~~~ 88 (338)
T 1krh_A 16 RFICIAQ-GETLSDAAYRQQIN------IPMDCREGECGTCRAFCESGNYDMPEDNYIEDALTPEEAQQGYVLACQCRPT 88 (338)
T ss_dssp EEEEECT-TCCHHHHHHHTTCC------CSCSCSSSSSCTTEEEEEECCEECCGGGSCTTTCCHHHHHHTEEETTTCEES
T ss_pred EEEEeCC-CCcHHHHHHHcCCC------cccCCCCcCCCCCEEEEecCcEecccCccccccCCHHHHhCCeEEEEeCEEC
Confidence 6677777 99999999998742 34568999999999998 7742 689999886
Q ss_pred C
Q 045926 139 G 139 (302)
Q Consensus 139 ~ 139 (302)
.
T Consensus 89 ~ 89 (338)
T 1krh_A 89 S 89 (338)
T ss_dssp S
T ss_pred C
Confidence 5
No 30
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=98.17 E-value=2.4e-06 Score=65.46 Aligned_cols=55 Identities=18% Similarity=0.443 Sum_probs=41.5
Q ss_pred eEEEEecCCCchhHHHHHHHcccccCCCcccccCCC-CCccCccEEEEC-CE------------------Eecccccccc
Q 045926 79 QSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCR-EGICGSCAMNIG-GT------------------NTVACLKPID 138 (302)
Q Consensus 79 ~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~-~g~CG~C~V~Vn-G~------------------~~laC~t~v~ 138 (302)
+.++|++.+ |.|||+||++.+.. ....+|+ .|.||+|.|.|. |. .+|||.+.+.
T Consensus 10 ~~~~~~~~~-g~tll~a~~~~gi~-----gi~~~C~G~G~Cg~C~v~v~~g~~~~~~~~e~~~L~~~~~g~rLaCq~~~~ 83 (93)
T 1l5p_A 10 VKKQLKFED-DQTLFTVLTEAGLM-----SADDTCQGNKACGKCICKHVSGKVAAAEDDEKEFLEDQPANARLACAITLS 83 (93)
T ss_dssp EEEEEECCT-TEEHHHHHHTTTSS-----CCTTSCSSSSSSCCCEEEEEESCCCCCCHHHHHHHTTSCTTEEEGGGCEEC
T ss_pred cEEEEEECC-CChHHHHHHHcCCC-----cCCcCCCCcCCcCCCEEEECCCcCCCCCHHHHHHhcCCCCCcEEeeECEEC
Confidence 447788887 99999999987631 1456799 899999999984 42 2578887775
Q ss_pred C
Q 045926 139 G 139 (302)
Q Consensus 139 ~ 139 (302)
.
T Consensus 84 ~ 84 (93)
T 1l5p_A 84 G 84 (93)
T ss_dssp G
T ss_pred C
Confidence 4
No 31
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=98.14 E-value=2.2e-06 Score=67.77 Aligned_cols=39 Identities=21% Similarity=0.451 Sum_probs=31.2
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCC-CCCccCccEEEEC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSC-REGICGSCAMNIG 126 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C-~~g~CG~C~V~Vn 126 (302)
.+|++.+ |.||||||++.|.. ...+| +.|.||+|.|.|.
T Consensus 17 ~~~~~~~-g~tlL~a~~~~gi~------i~~~C~~~G~Cg~C~v~v~ 56 (111)
T 1i7h_A 17 AVLEANS-GETILDAALRNGIE------IEHACEKSCACTTCHCIVR 56 (111)
T ss_dssp EEEECCT-TCBHHHHHHHTTCC------CCCTTSSSSCCSTTEEEEE
T ss_pred eEEEeCC-CCcHHHHHHHcCCC------CcccCCCCCcCCCCEEEEc
Confidence 5677777 99999999998742 34568 5899999999985
No 32
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=98.08 E-value=3.2e-07 Score=77.86 Aligned_cols=107 Identities=20% Similarity=0.405 Sum_probs=37.8
Q ss_pred hhhhhhhhccchhhhhccccccccccCCCCCCCccccCChhHHhhccccccCcccCcccCCCCCcccCCC-CcccHHHHH
Q 045926 154 FVIKDLVVDLTNFYQQYKSIEPWLKTNMVPKDGREYRQSPADRKKLDGLYECILCACCTTSCPSYWWNPE-EYLGPAALL 232 (302)
Q Consensus 154 ~vikDLvvD~~~~~~~~~~~~~~l~~~~~~~~~~e~~~s~~~~~~~~~~~~CI~CG~C~~aCP~~~~~~~-~~lgP~~l~ 232 (302)
.+++.|.+++.+++.+...+. |-......++ .+...+.......+.++||.||.|+.+||.....-. ....+...
T Consensus 5 ~~~~~l~~~~~~~~~~~~t~~-yp~~~~~~~~--~~~g~~~~~~~~~d~~~Ci~C~~C~~~CP~~ai~~~~~~~~~~~~- 80 (182)
T 3i9v_9 5 ALAQSLGITLKYLFSKPVTVP-YPDAPVALKP--RFHGRHVLTRHPNGLEKCIGCSLCAAACPAYAIYVEPAENDPENP- 80 (182)
T ss_dssp ----------------------CCSSCEECCT--TCCCSEEECBCTTSCBSCCCCCHHHHHCTTCCEEEEEECCCSSSC-
T ss_pred HHHHHHHHHHHHHcCCCcceE-CCCCCCCCCc--ccCCeEeeccCCCCCccCcccccchhhCCcccEEeeccccccccc-
Confidence 467788888877776543332 2111100000 010000000111246799999999999997542100 00000000
Q ss_pred HHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCC
Q 045926 233 HAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 233 ~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI 277 (302)
.....+.. ..... ..+.|+.||.|+.+||.++
T Consensus 81 ----~~~~~~~~--------~~~~~-~~~~C~~C~~C~~~CP~~A 112 (182)
T 3i9v_9 81 ----VSAGERYA--------KVYEI-NMLRCIFCGLCEEACPTGA 112 (182)
T ss_dssp ----SSSSSCEE--------EEEEE-ETTTCCCCCHHHHHCSSSC
T ss_pred ----cccccccc--------ceeec-CCCcCcChhChhhhCCccc
Confidence 00000000 00011 4578999999999999995
No 33
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=98.03 E-value=6.1e-06 Score=64.23 Aligned_cols=41 Identities=17% Similarity=0.421 Sum_probs=32.8
Q ss_pred EEEEecCCCchhHHHHHHHcccccCCCcccccCCC-CCccCccEEEECC
Q 045926 80 SYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCR-EGICGSCAMNIGG 127 (302)
Q Consensus 80 ~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~-~g~CG~C~V~VnG 127 (302)
.++|++.+ |.||||||++.+.. ...+|+ .|.||+|.|.|.+
T Consensus 15 ~~~~~~~~-g~tlL~a~~~~gi~------i~~~C~g~G~Cg~C~v~v~~ 56 (103)
T 2wlb_A 15 EIMIEGNE-GDSILDLAHANNID------LEGACEGSVACSTCHVIVDP 56 (103)
T ss_dssp EEEEEECT-TCBHHHHHHHTTCC------CCCTTTTSSCCSTTEEEECH
T ss_pred EEEEEECC-CCHHHHHHHHcCCC------cCcCCCCCCCcCCCEEEECC
Confidence 36677777 99999999998732 345798 7999999999864
No 34
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=97.85 E-value=2.2e-05 Score=61.70 Aligned_cols=55 Identities=16% Similarity=0.226 Sum_probs=39.0
Q ss_pred cceeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCC-CccCccEEEEC
Q 045926 56 KKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCRE-GICGSCAMNIG 126 (302)
Q Consensus 56 ~~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~-g~CG~C~V~Vn 126 (302)
...|++|++.. |+. +.++|++.+ |.|||+|++..+.. + ..+|+. |.||+|.|.|.
T Consensus 2 ~~~m~~v~~~~--~~g-------~~~~~~~~~-g~tlL~aa~~~gi~-i-----~~~C~g~G~CgtC~v~v~ 57 (109)
T 2y5c_A 2 ASDVVNVVFVD--RSG-------QRIPVSGRV-GDNVLHLAQRHGVD-L-----EGACEASLACSTCHVYVS 57 (109)
T ss_dssp -CCEEEEEEEC--TTS-------CEEEEEEET-TCBHHHHHHHTTCC-C-----CCTTSSSSSCCTTEEEEC
T ss_pred CCCcEEEEEEc--CCC-------CEEEEEECC-CCcHHHHHHHcCCC-C-----CcCCCCCcCcCccEEEEC
Confidence 34577777643 222 345677777 99999999998742 3 356886 99999999984
No 35
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=97.84 E-value=2.4e-05 Score=63.69 Aligned_cols=39 Identities=31% Similarity=0.707 Sum_probs=31.7
Q ss_pred EEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE-CC
Q 045926 82 HVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI-GG 127 (302)
Q Consensus 82 ~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V-nG 127 (302)
++++.+ |.|||+||++.|.. ...+|+.|.||+|.|+| .|
T Consensus 39 ~v~v~~-g~tlL~aa~~~Gi~------i~~~C~~G~CgtC~v~v~~G 78 (128)
T 1doi_A 39 SLEVNE-GEYILEAAEAQGYD------WPFSCRAGACANCAAIVLEG 78 (128)
T ss_dssp EEECCT-TSCHHHHHHHTTCC------CCCSSSSSSSSTTEEEEEES
T ss_pred EEEECC-CCcHHHHHHHcCCC------CccCCCccCCCCCEeEEecC
Confidence 566777 99999999998742 44568999999999998 55
No 36
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=97.80 E-value=3.1e-05 Score=60.76 Aligned_cols=55 Identities=13% Similarity=0.227 Sum_probs=40.1
Q ss_pred eeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCC-CccCccEEEEC
Q 045926 58 VMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCRE-GICGSCAMNIG 126 (302)
Q Consensus 58 ~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~-g~CG~C~V~Vn 126 (302)
.|++|+|.- |+. +.++|++.+ |.|||+|+++.+. .+|++ .+|+. |.||+|.|.|.
T Consensus 5 ~m~~V~~~~--~~g-------~~~~v~~~~-g~tLL~aa~~~gi-~i~~~---~~Cgg~G~CgtC~v~v~ 60 (108)
T 2bt6_A 5 DKITVHFIN--RDG-------ETLTTKGKI-GDSLLDVVVQNNL-DIDGF---GACEGTLACSTCHLIFE 60 (108)
T ss_dssp CEEEEEEEC--TTS-------CEEEEEEET-TCBHHHHHHHTTC-CCTTT---TTTSSSSSBSTTEEECC
T ss_pred ceEEEEEEC--CCC-------CEEEEEECC-CChHHHHHHHcCC-CCCcc---cCCCCCcCcCCCEEEEC
Confidence 466777653 221 236677777 9999999999874 35543 67986 99999999986
No 37
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=97.66 E-value=1.2e-05 Score=54.71 Aligned_cols=47 Identities=26% Similarity=0.556 Sum_probs=33.1
Q ss_pred cccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCC
Q 045926 202 LYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 202 ~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI 277 (302)
..+|+.||.|+.+||...... .++. . .. ....|+.||.|..+||+++
T Consensus 5 ~~~C~~C~~C~~~CP~~ai~~----------------~~~~----------~--~~-~~~~C~~C~~C~~~CP~~a 51 (55)
T 2fdn_A 5 NEACISCGACEPECPVNAISS----------------GDDR----------Y--VI-DADTCIDCGACAGVCPVDA 51 (55)
T ss_dssp CTTCCCCCTTGGGCTTCCEEC----------------CSSS----------C--EE-CTTTCCCCCHHHHTCTTCC
T ss_pred cccCcChhhHHHHCCccccCc----------------CCCE----------E--Ee-ccccCcChhChHHHccccc
Confidence 467999999999999753210 0110 0 11 3468999999999999985
No 38
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=97.56 E-value=4.8e-05 Score=59.27 Aligned_cols=40 Identities=20% Similarity=0.550 Sum_probs=31.7
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCC-CCccCccEEEEC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCR-EGICGSCAMNIG 126 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~-~g~CG~C~V~Vn 126 (302)
++|++.+ |.|||+|+++.+. . ....+|+ .|.||+|.|.|.
T Consensus 13 ~~~~~~~-g~tlL~aa~~~gi-~----~i~~~C~g~G~CgtC~v~v~ 53 (105)
T 1b9r_A 13 YAVDAQD-GQSLMEVATQNGV-P----GIVAECGGSCVCATCRIEIE 53 (105)
T ss_dssp EEEECCT-TCCTTHHHHHHTC-C----CCCCSSTTSSCCCCCCCEEC
T ss_pred EEEEECC-CChHHHHHHHcCC-C----CcCcCCCCCCCcCcCEEEEC
Confidence 6677777 9999999999873 1 1345698 699999999985
No 39
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=97.55 E-value=5.7e-05 Score=55.44 Aligned_cols=49 Identities=22% Similarity=0.493 Sum_probs=33.7
Q ss_pred ccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccc------cccccCC
Q 045926 201 GLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIK------NCTATCP 274 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg------~C~~vCP 274 (302)
+..+|+.||.|+.+||.....- .++. . .. ....|+.|| .|+.+||
T Consensus 4 ~~~~C~~C~~C~~~CP~~ai~~----------------~~~~----------~--~~-~~~~C~~C~~~~~~~~C~~~CP 54 (80)
T 1rgv_A 4 INDDCTACDACVEECPNEAITP----------------GDPI----------Y--VI-DPTKCSECVGAFDEPQCRLVCP 54 (80)
T ss_dssp CCSCCCCCCTTTTTCTTCCEEC----------------CSSS----------C--EE-CTTTCCTTTTTCSSCHHHHHCS
T ss_pred eCCCCcChhhHHHHcChhccCc----------------CCCe----------e--EE-cchhCcCCCCcCCccHHHHhcC
Confidence 4568999999999999743210 0110 0 01 345799999 9999999
Q ss_pred CCCC
Q 045926 275 KGLD 278 (302)
Q Consensus 275 ~gI~ 278 (302)
+++-
T Consensus 55 ~~Ai 58 (80)
T 1rgv_A 55 ADCI 58 (80)
T ss_dssp SCCC
T ss_pred cccE
Confidence 9853
No 40
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=97.52 E-value=5.3e-05 Score=55.92 Aligned_cols=48 Identities=21% Similarity=0.439 Sum_probs=33.0
Q ss_pred ccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccc------cccccCC
Q 045926 201 GLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIK------NCTATCP 274 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg------~C~~vCP 274 (302)
+..+|+.||.|+.+||..... +.++. . .. ....|+.|| .|+.+||
T Consensus 4 ~~~~C~~C~~C~~~CP~~ai~----------------~~~~~----------~--~~-~~~~C~~C~~~~~~~~C~~~CP 54 (82)
T 2fgo_A 4 ITDDCINCDVCEPECPNGAIS----------------QGEEI----------Y--VI-DPNLCTECVGHYDEPQCQQVCP 54 (82)
T ss_dssp CCTTCCCCCTTGGGCTTCCEE----------------ECSSS----------E--EE-CTTTCCTTTTTCSSCHHHHHCT
T ss_pred eCCCCCChhhHHHHCChhccC----------------CCCCe----------E--EE-EchhCccCCCcCCCCHhHhhCC
Confidence 456899999999999974321 00110 0 01 345799999 9999999
Q ss_pred CCC
Q 045926 275 KGL 277 (302)
Q Consensus 275 ~gI 277 (302)
.++
T Consensus 55 ~~A 57 (82)
T 2fgo_A 55 VDC 57 (82)
T ss_dssp TCC
T ss_pred ccc
Confidence 874
No 41
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=97.50 E-value=1.3e-05 Score=58.56 Aligned_cols=57 Identities=21% Similarity=0.490 Sum_probs=34.7
Q ss_pred ccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCCC
Q 045926 201 GLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~ 278 (302)
+...|+.||.|+.+||......... ++.... .+.... ....|+.||.|+.+||.++-
T Consensus 6 ~~~~C~~Cg~C~~~CP~~a~~~~~~--------------~~~~~~------~~~~~~-~~~~C~~Cg~C~~~CP~~ai 62 (80)
T 1jb0_C 6 IYDTCIGCTQCVRACPTDVLEMVPW--------------DGCKAG------QIASSP-RTEDCVGCKRCETACPTDFL 62 (80)
T ss_dssp EETTCCCCCHHHHHCTTCCCEEEEC--------------SSSTTS------EEEECT-TGGGCCCCCHHHHHCCSSSC
T ss_pred cCCcCcChhHHHHHCCccccccccc--------------cccccc------ccccCC-CCCcCcCcCChhhhCCCCcc
Confidence 4578999999999999754210000 000000 000011 34689999999999999863
No 42
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=97.48 E-value=4.1e-05 Score=57.04 Aligned_cols=47 Identities=23% Similarity=0.528 Sum_probs=32.5
Q ss_pred ccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccc------cccccCC
Q 045926 201 GLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIK------NCTATCP 274 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg------~C~~vCP 274 (302)
+..+|+.||.|+.+||...... .++. . .. ....|+.|| .|+.+||
T Consensus 4 ~~~~C~~C~~C~~~CP~~ai~~----------------~~~~----------~--~~-~~~~C~~C~~~~~~~~C~~~CP 54 (85)
T 2zvs_A 4 ITKKCINCDMCEPECPNEAISM----------------GDHI----------Y--EI-NSDKCTECVGHYETPTCQKVCP 54 (85)
T ss_dssp ECTTCCCCCTTTTTCTTCCEEC----------------CSSS----------C--EE-CGGGCCTTTTTCSSCHHHHHCS
T ss_pred eCCcCcChhHHHHHCchhccCc----------------CCCc----------e--EE-eChhccCCCCcCCccHhhHhCc
Confidence 3468999999999999643210 0100 0 01 345799999 9999999
Q ss_pred C-C
Q 045926 275 K-G 276 (302)
Q Consensus 275 ~-g 276 (302)
+ +
T Consensus 55 ~~~ 57 (85)
T 2zvs_A 55 IPN 57 (85)
T ss_dssp SCC
T ss_pred CCC
Confidence 9 5
No 43
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=97.48 E-value=1.4e-05 Score=61.43 Aligned_cols=60 Identities=18% Similarity=0.312 Sum_probs=35.9
Q ss_pred hccccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCC
Q 045926 198 KLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 198 ~~~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI 277 (302)
...+..+|+.||.|+.+||.......+..+ ...... ..... ....|+.||.|+.+||+++
T Consensus 38 ~~id~~~C~~Cg~C~~~CP~~ai~~~~~~~------------~~~~~~-------~~~~~-~~~~C~~Cg~C~~~CP~~A 97 (103)
T 1xer_A 38 VGVDFDLCIADGSCINACPVNVFQWYDTPG------------HPASEK-------KADPV-NEQACIFCMACVNVCPVAA 97 (103)
T ss_dssp EEEETTTCCCCCHHHHHCTTCCCEEEECTT------------CSSCSE-------EEECT-TGGGCCCCCHHHHHCTTCC
T ss_pred EEEehhhCCChhhHHHHcCccCeecccccC------------cccccc-------ceeec-CcccccChhhHHHhccccc
Confidence 345667899999999999965321000000 000000 00011 3468999999999999985
No 44
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=97.46 E-value=4.4e-05 Score=52.28 Aligned_cols=51 Identities=22% Similarity=0.475 Sum_probs=33.2
Q ss_pred cccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCC
Q 045926 200 DGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI 277 (302)
.+..+|+.||.|+.+||...... .++... +.+ ....|..||.|+.+||+++
T Consensus 5 i~~~~C~~C~~C~~~Cp~~~~~~----------------~~~~~~--------~~~---~~~~c~~C~~C~~~CP~~A 55 (60)
T 1rof_A 5 VDADACIGCGVCENLCPDVFQLG----------------DDGKAK--------VLQ---PETDLPCAKDAADSCPTGA 55 (60)
T ss_dssp ECTTTCCSCCSSTTTCTTTBCCC----------------SSSCCC--------BSC---SSCCSTTHHHHHHHCTTCC
T ss_pred EchhhCCCChHHHHhCcHHHeEC----------------CCCCEe--------ecC---chhhHHHHHHHHHhCCHhH
Confidence 35578999999999999622100 011100 000 1357999999999999985
No 45
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=97.45 E-value=3.1e-05 Score=57.37 Aligned_cols=50 Identities=24% Similarity=0.415 Sum_probs=34.2
Q ss_pred cccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccc------cccccC
Q 045926 200 DGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIK------NCTATC 273 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg------~C~~vC 273 (302)
.+..+|+.||.|+.+||..... +.++. . .. ....|+.|| .|+.+|
T Consensus 3 ~~~~~C~~C~~C~~~CP~~ai~----------------~~~~~----------~--~i-~~~~C~~C~~~~~~~~C~~~C 53 (82)
T 3eun_A 3 MITDECINCDVCEPECPNGAIS----------------QGDET----------Y--VI-EPSLCTECVGHYETSQCVEVC 53 (82)
T ss_dssp EECTTCCCCCTTGGGCTTCCEE----------------ECSSS----------E--EE-CGGGCCTTTTTCSSCHHHHHC
T ss_pred EeCCCCcCccchHHHCChhheE----------------cCCCc----------e--EE-chhhcCCCCCCCCccHHHHhC
Confidence 3457899999999999964321 00110 0 01 335799999 999999
Q ss_pred CCCCC
Q 045926 274 PKGLD 278 (302)
Q Consensus 274 P~gI~ 278 (302)
|.++-
T Consensus 54 P~~Ai 58 (82)
T 3eun_A 54 PVDAI 58 (82)
T ss_dssp TTCCE
T ss_pred Cccce
Confidence 99863
No 46
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=97.39 E-value=2.8e-05 Score=60.42 Aligned_cols=49 Identities=22% Similarity=0.403 Sum_probs=33.9
Q ss_pred ccccCcccC--cccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCCC
Q 045926 201 GLYECILCA--CCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 201 ~~~~CI~CG--~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~ 278 (302)
+..+|+.|| .|+.+||...... .++. + .. ....|+.||.|+.+||.++-
T Consensus 4 ~~~~C~~C~~~~C~~~CP~~ai~~----------------~~~~----------~--~i-~~~~C~~Cg~C~~~CP~~ai 54 (106)
T 7fd1_A 4 VTDNCIKCKYTDCVEVCPVDCFYE----------------GPNF----------L--VI-HPDECIDCALCEPECPAQAI 54 (106)
T ss_dssp ECGGGTTTCCCHHHHHCTTCCEEE----------------CSSC----------E--EE-CTTTCCCCCTTGGGCTTCCE
T ss_pred CccccCCccCcHHHHHcCccceEc----------------CCCc----------E--EE-CcccCCChhhhHHhCCChhh
Confidence 457899999 9999999743210 0110 0 01 23579999999999999874
No 47
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=97.39 E-value=7.6e-05 Score=54.36 Aligned_cols=49 Identities=22% Similarity=0.316 Sum_probs=33.6
Q ss_pred ccccCcc--cCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCCC
Q 045926 201 GLYECIL--CACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 201 ~~~~CI~--CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~ 278 (302)
+..+|+. ||.|+.+||..... + .++. . .. ....|+.||.|+.+||.++-
T Consensus 4 ~~~~C~~c~C~~C~~~Cp~~ai~----~------------~~~~----------~--~~-~~~~C~~Cg~C~~~CP~~ai 54 (77)
T 1bc6_A 4 ITEPCIGTKDASCVEVCPVDCIH----E------------GEDQ----------Y--YI-DPDVCIDCGACEAVCPVSAI 54 (77)
T ss_dssp CCSTTTTCCCCSSTTTCTTCCEE----E------------CSSS----------E--EE-CTTTCCSCCSHHHHSGGGSS
T ss_pred eCccCCCCCcchhHHhcccccEE----e------------CCCc----------E--EE-CcccCcCccCCHhhcCccce
Confidence 4568999 99999999974321 0 0110 0 11 34589999999999998853
No 48
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=97.39 E-value=0.00026 Score=55.21 Aligned_cols=43 Identities=14% Similarity=0.336 Sum_probs=33.8
Q ss_pred eEEEEecCCCchhHHHHHHHcccccCCCcccccCCC-CCccCccEEEECC
Q 045926 79 QSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCR-EGICGSCAMNIGG 127 (302)
Q Consensus 79 ~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~-~g~CG~C~V~VnG 127 (302)
+.+.|++.+ |.|||+||++.+.. . ...+|+ .|.||+|.|.|..
T Consensus 11 ~~~~~~~~~-g~tll~a~~~~gi~---~--i~~~C~G~G~CgtC~v~v~~ 54 (104)
T 3lxf_A 11 TRTEIQAEP-GLSLMEALRDAGID---E--LLALCGGCCSCATCHVLVAP 54 (104)
T ss_dssp CEEEEECCT-TSBHHHHHHHTTCT---T--CCCTTCSSSSCSTTEEEECG
T ss_pred CEEEEEECC-CChHHHHHHHcCCC---C--CCcCCCCCCCCCCCEEEECC
Confidence 357888888 99999999998732 1 335798 8999999999853
No 49
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=97.36 E-value=5e-05 Score=73.47 Aligned_cols=68 Identities=16% Similarity=0.288 Sum_probs=42.4
Q ss_pred hhccccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCC
Q 045926 197 KKLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKG 276 (302)
Q Consensus 197 ~~~~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~g 276 (302)
....+..+|+.||.|+.+||...... .++... .+ . ....|+.||.|+.+||++
T Consensus 27 ~i~~d~~kCi~Cg~C~~~CP~~ai~~----------------~~~~~~-------~i---~-~~~~C~~Cg~C~~~CP~~ 79 (421)
T 1hfe_L 27 FVQIDEAKCIGCDTCSQYCPTAAIFG----------------EMGEPH-------SI---P-HIEACINCGQCLTHCPEN 79 (421)
T ss_dssp SEEECTTTCCCCCHHHHHCTTCCCBC----------------CTTSCC-------BC---C-CGGGCCCCCTTGGGCTTC
T ss_pred eEEECcccCCCccHHHHhcCcCceec----------------ccccce-------ee---c-ChhhCCchhhHHHhhCcC
Confidence 45567889999999999999743210 011000 00 0 235799999999999998
Q ss_pred CCHH--HHHHHHHHHHh
Q 045926 277 LDPA--DAIHKMKTKHM 291 (302)
Q Consensus 277 I~~~--~~I~~lR~~l~ 291 (302)
+-.. ..+..+...+.
T Consensus 80 Ai~~~~~~~~~v~~~l~ 96 (421)
T 1hfe_L 80 AIYEAQSWVPEVEKKLK 96 (421)
T ss_dssp CEEESCCCHHHHHHHHH
T ss_pred Ccccccccchhhhhhhc
Confidence 6532 23444444443
No 50
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=97.35 E-value=0.00029 Score=57.11 Aligned_cols=55 Identities=16% Similarity=0.378 Sum_probs=38.9
Q ss_pred ceeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCC-CCccCccEEEEC
Q 045926 57 KVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCR-EGICGSCAMNIG 126 (302)
Q Consensus 57 ~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~-~g~CG~C~V~Vn 126 (302)
..|.+|++.- |+. ++++|++.+ |.|||+||++.+.. . ...+|+ .|.||+|.|.|.
T Consensus 19 ~~M~~Vt~~~--~~G-------~~~~v~~~~-G~tLL~aa~~~gi~---g--i~~~C~G~G~CgtC~v~v~ 74 (126)
T 3hui_A 19 SHMAKINFVD--HTG-------ETRTVEVEE-GATVMEAAIRNAIP---G--VEAECGGACACATCHVYVD 74 (126)
T ss_dssp CSEEEEEEEC--TTS-------CEEEEEEET-TSBHHHHHHTTTCT---T--CCCTTSSSSCCSTTEEEEC
T ss_pred CCceEEEEEe--CCC-------CEEEEEECC-CCcHHHHHHHcCCC---C--CccCCCCCCCCCCCEEEEC
Confidence 3467777653 221 346677777 99999999988731 1 335698 799999999985
No 51
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=97.32 E-value=9.7e-05 Score=50.33 Aligned_cols=52 Identities=19% Similarity=0.346 Sum_probs=33.0
Q ss_pred cccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCC
Q 045926 200 DGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI 277 (302)
.+..+|+.||.|+.+||..... + ..++... +. . ....|+.||.|+.+||+++
T Consensus 4 i~~~~C~~C~~C~~~Cp~~~~~-----~----------~~~~~~~--------~~--~-~~~~c~~C~~C~~~CP~~A 55 (59)
T 1dwl_A 4 IDHEECIGCESCVELCPEVFAM-----I----------DGEEKAM--------VT--A-PDSTAECAQDAIDACPVEA 55 (59)
T ss_dssp ESSCCCSSCCGGGGTSTTTEEE-----E----------ECSSCEE--------ES--C-TTCCCGGGGTGGGGSTTCC
T ss_pred EChhhCcChhHHHHHCCHHhee-----c----------CCCCcEE--------Ee--c-ChhhhhHHHHHHHhCCHhh
Confidence 3457899999999999942100 0 0011100 00 1 2357999999999999986
No 52
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=97.32 E-value=0.00018 Score=78.68 Aligned_cols=92 Identities=18% Similarity=0.265 Sum_probs=65.2
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHH-cccccCCCcccccCCCCCccCccEEEE------CCE---
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQK-IKAETDSSLSYRRSCREGICGSCAMNI------GGT--- 128 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~-i~~~~dptL~~~~~C~~g~CG~C~V~V------nG~--- 128 (302)
.+.|.|++ +.++++..+..+|||+-||. ++. -..+.+|.+|-||+|+|.| +|+
T Consensus 9 ~l~F~vNG------------~~v~~~~~~p~~tLl~~LR~~~~l-----tGTK~gC~EG~CGACtV~v~~~~~~~~~~~~ 71 (1335)
T 3zyv_A 9 ELIFFVNG------------KKVTERNADPEVNLLFYLRKVIRL-----TGTKYGCGGGDCGACTVMISRYDPISKRISH 71 (1335)
T ss_dssp CEEEEETT------------EEEEESSCCTTCBHHHHHHHTTCC-----TTSCCSCSSSSSCTTEEEEEEEETTTTEEEE
T ss_pred eEEEEECC------------EEEEeCCCCcCccHHHHHhccCCC-----cccccccCCCCCcceEEEEeeEeCCCCeEEE
Confidence 47788887 55766533337999999997 332 1456789999999999998 453
Q ss_pred -EeccccccccCCCC-CceEEccCCC----chhhhhhhhccchhh
Q 045926 129 -NTVACLKPIDGDTS-KPTIITPLPH----MFVIKDLVVDLTNFY 167 (302)
Q Consensus 129 -~~laC~t~v~~~~~-~~~~Iepl~~----~~vikDLvvD~~~~~ 167 (302)
.+.||.+++-...| ..+|||.|.+ +--++.-+++.+.--
T Consensus 72 ~avNsCl~~l~~~~g~~v~TvEglg~~~~~lHpvQ~~~a~~hgsQ 116 (1335)
T 3zyv_A 72 FSATACLVPICSLHGAAVTTVEGIGSTKTRIHPVQERIAKGHGTQ 116 (1335)
T ss_dssp EEEETTTCBGGGCTTCEEECHHHHCCTTSCCCHHHHHHHHTTCCS
T ss_pred EEhhHHHHHHHHhcCCEEEeeCCCCCCCCCCCHHHHHHHhcCCCc
Confidence 56799999988665 4678999864 334445555655533
No 53
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=97.28 E-value=0.00029 Score=54.80 Aligned_cols=41 Identities=15% Similarity=0.385 Sum_probs=31.9
Q ss_pred EEEEecCCCchhHHHHHHHcccccCCCcccccCCC-CCccCccEEEEC
Q 045926 80 SYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCR-EGICGSCAMNIG 126 (302)
Q Consensus 80 ~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~-~g~CG~C~V~Vn 126 (302)
.++|++.+ |.|||+|+++.+. . ....+|+ .|.||+|.|.|.
T Consensus 12 ~~~~~~~~-g~tlLeaa~~~gi-~----~i~~~C~g~G~CgtC~v~v~ 53 (106)
T 1xlq_A 12 RRELDVAD-GVSLMQAAVSNGI-Y----DIVGDCGGSASCATCHVYVN 53 (106)
T ss_dssp EEEEECCT-TCBHHHHHHHTTC-T----TSCCTTCSSSSSCTTEEEEC
T ss_pred EEEEEECC-CCcHHHHHHHcCC-C----CCCcCCCCCcccCcCEEEEC
Confidence 36777877 9999999999873 2 1345685 799999999985
No 54
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=97.24 E-value=0.00029 Score=54.80 Aligned_cols=41 Identities=17% Similarity=0.382 Sum_probs=32.0
Q ss_pred EEEEecCCCchhHHHHHHHcccccCCCcccccCCC-CCccCccEEEEC
Q 045926 80 SYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCR-EGICGSCAMNIG 126 (302)
Q Consensus 80 ~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~-~g~CG~C~V~Vn 126 (302)
.++|++.+ |.|||+|+++.+. . ....+|+ .|.||+|.|.|.
T Consensus 12 ~~~~~~~~-g~tlL~aa~~~gi-~----~i~~~C~g~G~CgtC~v~v~ 53 (106)
T 1uwm_A 12 RHEVEAKP-GLTVMEAARDNGV-P----GIDADCGGACACSTCHAYVD 53 (106)
T ss_dssp EEEEECCT-TSBHHHHHHTTTC-T----TCCCTTSSSSSSCTTEEEEC
T ss_pred EEEEEECC-CCcHHHHHHHcCC-C----CcccCCCCCCCcCcCEEEEC
Confidence 36777877 9999999999873 2 1345685 799999999985
No 55
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=97.18 E-value=4.9e-05 Score=55.62 Aligned_cols=49 Identities=18% Similarity=0.298 Sum_probs=33.7
Q ss_pred ccccCcc--cCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCCC
Q 045926 201 GLYECIL--CACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 201 ~~~~CI~--CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~ 278 (302)
+..+|+. ||.|+.+||...... .++. + .. ....|+.||.|+.+||.++-
T Consensus 4 ~~~~C~~c~C~~C~~~CP~~ai~~----------------~~~~----------~--~~-~~~~C~~C~~C~~~CP~~Ai 54 (78)
T 1h98_A 4 ICEPCIGVKDQSCVEVCPVECIYD----------------GGDQ----------F--YI-HPEECIDCGACVPACPVNAI 54 (78)
T ss_dssp ECGGGTTTCCCHHHHHCTTCCEEE----------------CSSS----------E--EE-CTTTCCCCCTHHHHCTTCCE
T ss_pred EchhCCCCCcChhhhhcCccceEc----------------CCCE----------E--EE-CcccCCcHhHHHHhCCccce
Confidence 4568999 999999999743210 0110 0 01 34579999999999999863
No 56
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=97.17 E-value=0.00064 Score=68.81 Aligned_cols=52 Identities=25% Similarity=0.555 Sum_probs=40.4
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCC-CCccCccEEEE-CCE-----------------EeccccccccC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCR-EGICGSCAMNI-GGT-----------------NTVACLKPIDG 139 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~-~g~CG~C~V~V-nG~-----------------~~laC~t~v~~ 139 (302)
.++++.+ |.|||||+++.+.. ...+|+ .|.||+|.|.| .|. .+|+|.+.+..
T Consensus 13 ~~v~v~~-G~tLLeAa~~aGi~------ip~~C~G~G~CGtC~v~V~~G~v~~~e~~~Ls~~e~~~G~rLaCqa~~~s 83 (631)
T 3zyy_X 13 KEVAISE-NTNLMEALNLAGIN------IKTVCGGAGTCGKCLVRVVDGQKRVESYGKLKQEEIAQGYVLACQTYPES 83 (631)
T ss_dssp EEEEECT-TSCHHHHHHHHTCC------CCCSCCCSSCCSTTEEEEEESCEEESCCTTCCHHHHHTTEEETTTEEECS
T ss_pred eEEEECC-CCcHHHHHHHcCCC------CCcCCCCCCcCCCCEEEEeeCcccccccccCCHHHhcCCcEEeeeCEECC
Confidence 4566667 89999999998742 456799 89999999987 332 47899998864
No 57
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=97.17 E-value=4.3e-05 Score=52.30 Aligned_cols=51 Identities=14% Similarity=0.404 Sum_probs=32.7
Q ss_pred cccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCC
Q 045926 200 DGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI 277 (302)
.+ .+|+.||.|+.+||...... .++... ..+ . ....|..||.|+.+||+++
T Consensus 4 id-~~C~~C~~C~~~CP~~~~~~----------------~~~~~~--------~~~-~-~~~~C~~C~~C~~~CP~~A 54 (58)
T 1f2g_A 4 VN-DDCMACEACVEICPDVFEMN----------------EEGDKA--------VVI-N-PDSDLDCVEEAIDSCPAEA 54 (58)
T ss_dssp CT-TTCCCCCHHHHHCTTTEEEC----------------SSSSSE--------EES-C-TTCCSTHHHHHHHTCSSCC
T ss_pred EC-CcCccchHHHHhCCccEEEC----------------CCCcEE--------EeC-C-CccchHHHHHHHhhCChhh
Confidence 35 78999999999999632100 001000 000 0 1357999999999999986
No 58
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=97.07 E-value=9.8e-05 Score=57.03 Aligned_cols=49 Identities=18% Similarity=0.283 Sum_probs=33.6
Q ss_pred ccccCccc--CcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCCCC
Q 045926 201 GLYECILC--ACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 201 ~~~~CI~C--G~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI~ 278 (302)
+..+|+.| |.|+.+||..... +.+.. . .. ....|+.||.|+.+||.++-
T Consensus 4 ~~~~C~~C~c~~C~~~CP~~ai~----------------~~~~~----------~--~~-~~~~C~~Cg~C~~~CP~~Ai 54 (105)
T 2v2k_A 4 IAEPCVDVKDKACIEECPVDCIY----------------EGARM----------L--YI-HPDECVDCGACEPVCPVEAI 54 (105)
T ss_dssp ECGGGTTTCCCHHHHHCTTCCEE----------------ECSSC----------E--EE-CTTTCCCCCCSGGGCTTCCE
T ss_pred ecccCCCCCcChhhhhcCccccC----------------cCCCc----------E--EE-eCCcCcchhhHHHhCCccCE
Confidence 45689988 9999999974321 00110 0 01 34589999999999999863
No 59
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=97.03 E-value=0.00062 Score=62.87 Aligned_cols=40 Identities=25% Similarity=0.655 Sum_probs=31.3
Q ss_pred EEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE-CCE
Q 045926 82 HVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI-GGT 128 (302)
Q Consensus 82 ~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V-nG~ 128 (302)
++++.+ |.||||||++.|.. ...+|+.|.||+|.|+| .|.
T Consensus 248 ~~~~~~-~~~ll~a~~~~g~~------~~~~C~~G~Cg~C~~~v~~G~ 288 (321)
T 2pia_A 248 SFEIPA-NRSILEVLRDANVR------VPSSCESGTCGSCKTALCSGE 288 (321)
T ss_dssp EEEECT-TSCHHHHHHHTTCC------CCCSCSSSSSCTTEEEEEESC
T ss_pred EEEECC-CCcHHHHHHHcCCC------CCCCCCCCCCCCCEEEEecCc
Confidence 345556 89999999998742 45679999999999987 464
No 60
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=96.85 E-value=7.1e-05 Score=52.30 Aligned_cols=52 Identities=19% Similarity=0.353 Sum_probs=32.9
Q ss_pred cccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhcc-CcchhHHHHHHHhhhcccccccCcccccccccCCCCC
Q 045926 200 DGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICD-SRDELTEERLQALTEDERKLYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d-~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~gI 277 (302)
.+..+|+.||.|+.+|| ..+.-+ .+ +... +. .. ....|..||.|+.+||+++
T Consensus 6 id~~~C~~Cg~C~~~CP-~~~~~~---------------~~~~~~~--------~~-~~-~~~~C~~C~~C~~~CP~~A 58 (64)
T 1dax_A 6 VDQDECIACESCVEIAP-GAFAMD---------------PEIEKAY--------VK-DV-EGASQEEVEEAMDTCPVQC 58 (64)
T ss_dssp ECSTTCCSCCHHHHHCT-TTEEEC---------------SSSSSEE--------EC-CG-GGSCHHHHHHHHHHSSSCC
T ss_pred EccccCCCchHHHHhCC-ccEeEc---------------CCCCEEE--------Ee-cC-CCcchhHHHHHHHhCCHhh
Confidence 45578999999999999 321100 00 1100 00 00 2357999999999999986
No 61
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=96.81 E-value=0.00025 Score=57.21 Aligned_cols=41 Identities=15% Similarity=0.286 Sum_probs=11.5
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCC-CCccCccEEEEC
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCR-EGICGSCAMNIG 126 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~-~g~CG~C~V~Vn 126 (302)
++|++.+ |.|||+|++..+.. +|. ...|+ .|.||+|.|.|.
T Consensus 18 ~~v~~~~-G~tLl~aa~~~gi~-i~g---~~~CgG~g~CgtC~v~v~ 59 (123)
T 3n9z_C 18 LTTKGKV-GDSLLDVVVENNLD-IDG---FGACEGTLACSTCHLIFE 59 (123)
T ss_dssp ------------------------------CTTCSSSSCSTTBC---
T ss_pred EEEEECC-CCcHHHHHHHcCCC-CCc---CCCCCCCCEeCCCeeEEe
Confidence 6677777 99999999998742 221 25697 799999999886
No 62
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.76 E-value=0.0012 Score=64.59 Aligned_cols=65 Identities=15% Similarity=0.110 Sum_probs=47.6
Q ss_pred ceeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccC-CCCCc--cCccEEEECCEE-ecc
Q 045926 57 KVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRS-CREGI--CGSCAMNIGGTN-TVA 132 (302)
Q Consensus 57 ~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~-C~~g~--CG~C~V~VnG~~-~la 132 (302)
+.+++|+|+. +++++ .+ |.||++||...+. |.|++... =+.|. ||.|.|+|||.+ +.+
T Consensus 13 ~~~v~~~~dg------------~~~~~--~~-g~ti~~a~~~~g~---~~~~~~~~~~p~g~~~~~~c~v~v~g~~~~~a 74 (493)
T 1y56_A 13 GKKVTIYFEG------------KELEA--YE-GEKLPVALLANEI---YWLTTSNEGRKRGAFTFGPVPMTVNGVKGLEA 74 (493)
T ss_dssp SCEEEEEETT------------EEEEE--ET-TCBHHHHHHHTTC---CCCEECTTSCEECSSSSSCCEEBSSSCTTEEG
T ss_pred CCeEEEEECC------------EEEEe--cC-CCHHHHHHHHCCC---ceecCCCCCCCCccccceEEEEEECCEecccc
Confidence 3468888877 44555 46 9999999998773 56664322 12355 789999999975 689
Q ss_pred ccccccC
Q 045926 133 CLKPIDG 139 (302)
Q Consensus 133 C~t~v~~ 139 (302)
|.|.+.+
T Consensus 75 c~~~v~~ 81 (493)
T 1y56_A 75 RRIKVKD 81 (493)
T ss_dssp GGCBCCT
T ss_pred eeEEccc
Confidence 9999976
No 63
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.69 E-value=0.00021 Score=60.45 Aligned_cols=53 Identities=23% Similarity=0.496 Sum_probs=34.4
Q ss_pred cccccCcccC-----cccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCC
Q 045926 200 DGLYECILCA-----CCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCP 274 (302)
Q Consensus 200 ~~~~~CI~CG-----~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP 274 (302)
.+..+|+.|| .|+.+||..... .+.... ..+ .. ....|+.||.|+.+||
T Consensus 4 id~~~C~gC~~c~~~~C~~~CP~~ai~-----------------~~~~~~------~~~--~~-d~~~C~~Cg~Cv~~CP 57 (166)
T 3gyx_B 4 VDPSKCDGCKGGEKTACMYICPNDLMI-----------------LDPEEM------KAF--NQ-EPEACWECYSCIKICP 57 (166)
T ss_dssp ECTTTCCCCCSSSCCHHHHHCTTSCEE-----------------EETTTT------EEE--ES-CGGGCCCCCHHHHHCS
T ss_pred EcchhcCCCCCCCcchhHHhCCccccE-----------------EecCCc------eeE--ec-CcccCcccChHhHhCC
Confidence 3457899999 999999974310 010000 000 01 2358999999999999
Q ss_pred CCCC
Q 045926 275 KGLD 278 (302)
Q Consensus 275 ~gI~ 278 (302)
.++-
T Consensus 58 ~~Ai 61 (166)
T 3gyx_B 58 QGAI 61 (166)
T ss_dssp SCCE
T ss_pred ccce
Confidence 9863
No 64
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=96.68 E-value=0.00024 Score=77.09 Aligned_cols=20 Identities=30% Similarity=0.541 Sum_probs=17.2
Q ss_pred cccccCcccCcccCCCCCcc
Q 045926 200 DGLYECILCACCTTSCPSYW 219 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~~~ 219 (302)
.+..+||+||.|+.+||...
T Consensus 683 ~d~~kCi~Cg~Cv~vCP~~A 702 (1231)
T 2c42_A 683 WVPENCIQCNQCAFVCPHSA 702 (1231)
T ss_dssp ECTTTCCCCCHHHHHCSSCC
T ss_pred EeCccCCchhhHHHhCCccc
Confidence 45689999999999999754
No 65
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=96.64 E-value=0.00024 Score=59.08 Aligned_cols=52 Identities=23% Similarity=0.487 Sum_probs=34.0
Q ss_pred cccccCcccC-----cccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCC
Q 045926 200 DGLYECILCA-----CCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCP 274 (302)
Q Consensus 200 ~~~~~CI~CG-----~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP 274 (302)
.+..+|+.|| .|+.+||..... .+..... .. .. ....|+.||.|+.+||
T Consensus 5 vd~~~C~~C~~~~~~~C~~~CP~~ai~-----------------~~~~~~~------~~--~i-d~~~C~~Cg~Cv~~CP 58 (150)
T 1jnr_B 5 VNPEKCDGCKALERTACEYICPNDLMT-----------------LDKEKMK------AY--NR-EPDMCWECYSCVKMCP 58 (150)
T ss_dssp ECTTTCCSCCSSSSCHHHHHCTTSCEE-----------------EETTTTE------EE--ES-CGGGCCCCCHHHHHCT
T ss_pred ECcccCCCCCCcccccchhhcCccCeE-----------------EecCCce------ee--ee-CcccCcCHhHHHHhCC
Confidence 3457899999 999999974311 0100000 00 01 2357999999999999
Q ss_pred CCC
Q 045926 275 KGL 277 (302)
Q Consensus 275 ~gI 277 (302)
.++
T Consensus 59 ~~A 61 (150)
T 1jnr_B 59 QGA 61 (150)
T ss_dssp TCC
T ss_pred ccc
Confidence 985
No 66
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=96.60 E-value=0.00016 Score=53.21 Aligned_cols=17 Identities=12% Similarity=0.258 Sum_probs=15.5
Q ss_pred ccCcccccccccCCCCC
Q 045926 261 YRCRAIKNCTATCPKGL 277 (302)
Q Consensus 261 ~~C~~Cg~C~~vCP~gI 277 (302)
..|..||.|+.+||+++
T Consensus 49 ~~c~~C~~C~~~CP~~A 65 (81)
T 1iqz_A 49 ILIDDMMDAFEGCPTDS 65 (81)
T ss_dssp GGHHHHHHHHHHCTTCC
T ss_pred HHHHHHHHHHHhCCHhH
Confidence 47999999999999987
No 67
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=96.20 E-value=0.00029 Score=48.99 Aligned_cols=18 Identities=33% Similarity=0.611 Sum_probs=15.6
Q ss_pred cccccCcccCcccCCCCC
Q 045926 200 DGLYECILCACCTTSCPS 217 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~ 217 (302)
.+..+|+.||.|+.+||.
T Consensus 6 id~~~C~~C~~C~~~Cp~ 23 (66)
T 1sj1_A 6 VDQDTCIGDAICASLCPD 23 (66)
T ss_dssp ECTTTCCCCCHHHHHCTT
T ss_pred ECcccCcCchHHHHhCCc
Confidence 456789999999999995
No 68
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=96.11 E-value=0.0015 Score=59.68 Aligned_cols=50 Identities=12% Similarity=0.121 Sum_probs=35.9
Q ss_pred hccccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCccc----------c
Q 045926 198 KLDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAI----------K 267 (302)
Q Consensus 198 ~~~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~C----------g 267 (302)
...+..+||.||.|+.+||..... .+.. .. ....|++| |
T Consensus 92 v~id~~~CigC~~C~~~CP~~Ai~-----------------~~~~-------------~~-~~~kC~~C~~r~~~~~~~G 140 (274)
T 1ti6_B 92 VLIDPEKAKGKKELLDTCPYGVMY-----------------WNEE-------------EN-VAQKCTMCAHLLDDESWAP 140 (274)
T ss_dssp EEECTTTTTTCGGGGGGCSSCCCE-----------------EETT-------------TT-EEECCCTTHHHHTCTTCTT
T ss_pred EEechhhccchHHHHhhCccCCeE-----------------EEcc-------------cC-ccccCCCchhhhhhhccCC
Confidence 345668999999999999964320 0100 01 34689999 9
Q ss_pred ---cccccCCCCCC
Q 045926 268 ---NCTATCPKGLD 278 (302)
Q Consensus 268 ---~C~~vCP~gI~ 278 (302)
.|+++||+++-
T Consensus 141 ~~P~Cv~~CP~~Ai 154 (274)
T 1ti6_B 141 KMPRCAHNCGSFVY 154 (274)
T ss_dssp CSCHHHHHCSSCCE
T ss_pred CCcchhhhCCcCce
Confidence 99999999875
No 69
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=95.95 E-value=0.001 Score=62.95 Aligned_cols=19 Identities=21% Similarity=0.565 Sum_probs=16.2
Q ss_pred cccCcccc---------cccccCCCCCC
Q 045926 260 LYRCRAIK---------NCTATCPKGLD 278 (302)
Q Consensus 260 ~~~C~~Cg---------~C~~vCP~gI~ 278 (302)
...|++|+ .|+.+||+++-
T Consensus 208 ~~kC~~C~~r~~~g~~paCv~~CP~~Ai 235 (352)
T 2ivf_B 208 SEKCILCYPRIEKGIANACNRQCPGRVR 235 (352)
T ss_dssp EEECCTTHHHHTTTBCCHHHHTCTTCCE
T ss_pred ccccCCCcchhhcCCCChHHHhcCccce
Confidence 46899996 99999998885
No 70
>2ivf_B Ethylbenzene dehydrogenase beta-subunit; anaerobic hydrocarbon degradation, MOCO, Fe/S cluster, MO- B enzyme, DMSO reductase family; HET: MES MGD MD1 HEM; 1.88A {Aromatoleum aromaticum}
Probab=95.87 E-value=0.00053 Score=64.82 Aligned_cols=54 Identities=20% Similarity=0.397 Sum_probs=36.3
Q ss_pred hccccccCcccC--cccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCC
Q 045926 198 KLDGLYECILCA--CCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPK 275 (302)
Q Consensus 198 ~~~~~~~CI~CG--~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~ 275 (302)
.+.....|++|+ .|+.+||+....... .++. + .. ....|+.||.|+.+||.
T Consensus 144 ~~~~~~~C~~C~~~~Cv~~CP~gAi~~~~--------------~~g~----------v--~i-d~~kCigCg~Cv~aCP~ 196 (352)
T 2ivf_B 144 FFYLARMCNHCTNPACLAACPTGAIYKRE--------------DNGI----------V--LV-DQERCKGHRHCVEACPY 196 (352)
T ss_dssp CEEEEECCCCCSSCHHHHHCTTCCEEECT--------------TTCC----------E--EE-CTTTCCCCCHHHHHCTT
T ss_pred EEECCCCCcCcCCccccccCCCCceeecC--------------CCCe----------E--Ee-chhhcCCchHHHhhcCc
Confidence 345678999999 999999975421000 0110 0 01 23589999999999999
Q ss_pred CCC
Q 045926 276 GLD 278 (302)
Q Consensus 276 gI~ 278 (302)
++.
T Consensus 197 ~Ai 199 (352)
T 2ivf_B 197 KAI 199 (352)
T ss_dssp CCE
T ss_pred cce
Confidence 874
No 71
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=95.84 E-value=0.0024 Score=55.22 Aligned_cols=18 Identities=28% Similarity=0.656 Sum_probs=12.3
Q ss_pred ccCcccc---------cccccCCCCCC
Q 045926 261 YRCRAIK---------NCTATCPKGLD 278 (302)
Q Consensus 261 ~~C~~Cg---------~C~~vCP~gI~ 278 (302)
..|++|+ .|+.+||+++-
T Consensus 114 ~kC~~C~~~~~~g~~p~Cv~~CP~~Ai 140 (195)
T 2vpz_B 114 SKCTFCAHRLEKGKVPACVETCPTYCR 140 (195)
T ss_dssp ECCCTTHHHHHTTCCCHHHHSCTTCCE
T ss_pred ccCcCcchHHhCCCCchhHhhCCcccE
Confidence 4577777 57777777664
No 72
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=95.68 E-value=0.0016 Score=64.35 Aligned_cols=48 Identities=23% Similarity=0.351 Sum_probs=34.7
Q ss_pred ccccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccc---------cc
Q 045926 199 LDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIK---------NC 269 (302)
Q Consensus 199 ~~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg---------~C 269 (302)
..+..+|+.||.|+.+||..... .+.. .. ....|++|| .|
T Consensus 211 ~id~~kCigCg~Cv~~CP~~AI~-----------------~~~~-------------~~-~~~kC~~Cg~ri~~G~~P~C 259 (512)
T 1q16_B 211 LIDQDKCRGWRMCITGCPYKKIY-----------------FNWK-------------SG-KSEKCIFCYPRIEAGQPTVC 259 (512)
T ss_dssp EECTTTCCCCCCHHHHCTTCCEE-----------------EETT-------------TT-EEEECCTTHHHHTTTCCCHH
T ss_pred EECHHHCCCchHHHhhCCcccee-----------------cccC-------------CC-CcccCcCCCchhhcCCCCce
Confidence 45667899999999999964310 0110 01 345899999 99
Q ss_pred cccCCCCC
Q 045926 270 TATCPKGL 277 (302)
Q Consensus 270 ~~vCP~gI 277 (302)
+.+||.++
T Consensus 260 v~~CP~~A 267 (512)
T 1q16_B 260 SETCVGRI 267 (512)
T ss_dssp HHTCTTCC
T ss_pred EeeCchhh
Confidence 99999988
No 73
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=95.61 E-value=0.0017 Score=59.65 Aligned_cols=49 Identities=29% Similarity=0.631 Sum_probs=34.6
Q ss_pred ccccccCcccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccc---------cc
Q 045926 199 LDGLYECILCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIK---------NC 269 (302)
Q Consensus 199 ~~~~~~CI~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg---------~C 269 (302)
..+..+|+.||.|+.+||..... .+.. .. ....|+.|+ .|
T Consensus 127 ~id~~~CigCg~C~~~CP~~ai~-----------------~~~~-------------~~-~~~kC~~C~~r~~~g~~p~C 175 (294)
T 1kqf_B 127 DFQSENCIGCGYCIAGCPFNIPR-----------------LNKE-------------DN-RVYKCTLCVDRVSVGQEPAC 175 (294)
T ss_dssp EECGGGCCCCCHHHHHCTTCCCE-----------------EETT-------------TT-EEECCCTTHHHHTTTCCCHH
T ss_pred EeCcccCCCcchhhhcCCCCCcE-----------------ecCC-------------CC-CeeeCCCccchhhcCccHHH
Confidence 34567899999999999964310 0110 01 345899998 99
Q ss_pred cccCCCCCC
Q 045926 270 TATCPKGLD 278 (302)
Q Consensus 270 ~~vCP~gI~ 278 (302)
+.+||+++-
T Consensus 176 v~~CP~~Ai 184 (294)
T 1kqf_B 176 VKTCPTGAI 184 (294)
T ss_dssp HHHCTTSCE
T ss_pred HHhCCcCcE
Confidence 999999875
No 74
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=95.21 E-value=0.00093 Score=71.24 Aligned_cols=51 Identities=24% Similarity=0.464 Sum_probs=32.8
Q ss_pred cccccCcccCcccCCCCC--cccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCC-C
Q 045926 200 DGLYECILCACCTTSCPS--YWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPK-G 276 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~--~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~-g 276 (302)
.+..+|+.||.|+.+||. +... . .+.... . ... . ..|+.||.|+.+||. +
T Consensus 948 id~~~C~~Cg~C~~~CP~~~~~ai--------------~--~~~~~~--------~-~~~-~-~~C~~Cg~C~~~CP~~~ 1000 (1025)
T 1gte_A 948 IDEEMCINCGKCYMTCNDSGYQAI--------------Q--FDPETH--------L-PTV-T-DTCTGCTLCLSVCPIID 1000 (1025)
T ss_dssp ECTTTCCCCCHHHHHHHHHSCSCE--------------E--ECTTTC--------C-EEE-C-TTCCCCCHHHHHCSSTT
T ss_pred EEcccCcccCHHHHhcCccccCCE--------------E--EeCCCc--------e-EEe-C-ccCCChhHHHhhCCCCC
Confidence 456789999999999995 1110 0 010000 0 011 2 679999999999998 5
Q ss_pred C
Q 045926 277 L 277 (302)
Q Consensus 277 I 277 (302)
+
T Consensus 1001 A 1001 (1025)
T 1gte_A 1001 C 1001 (1025)
T ss_dssp T
T ss_pred C
Confidence 4
No 75
>2vpz_B NRFC protein; oxidoreductase, molybdopterin guanine dinucleotide, iron-sulfur, metal-binding, molybdopterin; HET: MGD; 2.40A {Thermus thermophilus} PDB: 2vpx_B* 2vpw_B* 2vpy_B*
Probab=95.18 E-value=0.0029 Score=54.64 Aligned_cols=50 Identities=24% Similarity=0.418 Sum_probs=33.7
Q ss_pred ccccccCcccC--cccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCC
Q 045926 199 LDGLYECILCA--CCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKG 276 (302)
Q Consensus 199 ~~~~~~CI~CG--~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~g 276 (302)
......|+.|+ .|+.+||+...... .++. + .. ....|+.||.|+.+||.+
T Consensus 52 ~~~~~~C~~C~~p~C~~~CP~gAi~~~---------------~~g~----------~--~i-d~~~CigC~~C~~~CP~~ 103 (195)
T 2vpz_B 52 EFRPEQCLHCENPPCVPVCPTGASYQT---------------KDGL----------V--LV-DPKKCIACGACIAACPYD 103 (195)
T ss_dssp EEEEEECCCCSSCTTTTTCSSSCEEEC---------------TTSC----------E--EE-CTTTCCCCCHHHHHCTTC
T ss_pred EECcccCcCccCcHHHHhcCCCceecc---------------cccc----------e--ee-cCCCCCCcChhHhhCCCC
Confidence 44567899999 79999997542100 0110 0 11 345899999999999976
No 76
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=95.07 E-value=0.0054 Score=53.71 Aligned_cols=62 Identities=13% Similarity=0.180 Sum_probs=40.8
Q ss_pred ccccccCc--ccCcccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCccc------c---
Q 045926 199 LDGLYECI--LCACCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAI------K--- 267 (302)
Q Consensus 199 ~~~~~~CI--~CG~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~C------g--- 267 (302)
..+..+|+ .||.|+.+||..... .+.. .. ....|+.| |
T Consensus 102 ~id~~~C~~~~C~~C~~~CP~~Ai~-----------------~~~~-------------~~-~~~kC~~C~~~~~~G~~p 150 (214)
T 1h0h_B 102 LFTPKTKDLEDYESVISACPYDVPR-----------------KVAE-------------SN-QMAKCDMCIDRITNGLRP 150 (214)
T ss_dssp EECGGGGGCSCHHHHHHHCTTCCCE-----------------ECTT-------------SS-CEECCCTTHHHHTTTCCC
T ss_pred EEeHHHCccccccHHHHhcCCCCeE-----------------ecCC-------------Cc-ccCcCCCCcchhhcCCCh
Confidence 44567899 999999999965321 0100 01 34579999 5
Q ss_pred cccccCCCCCC----HHHHHHHHHHHHh
Q 045926 268 NCTATCPKGLD----PADAIHKMKTKHM 291 (302)
Q Consensus 268 ~C~~vCP~gI~----~~~~I~~lR~~l~ 291 (302)
.|+.+||+++- ..++....++.+.
T Consensus 151 ~Cv~~CP~~Ai~~~~~~~~~~~~~~~~~ 178 (214)
T 1h0h_B 151 ACVTSCPTGAMNFGDLSEMEAMASARLA 178 (214)
T ss_dssp HHHHHCSSSCEEEEEHHHHHHHHHHHHH
T ss_pred hHHHhcCcccEEEccHHHHHHHHHHHHH
Confidence 99999999875 4455555555444
No 77
>1q16_B Respiratory nitrate reductase 1 beta chain; membrane protein, electron-transfer, oxidoreductase; HET: FME MD1 HEM AGA 3PH; 1.90A {Escherichia coli} SCOP: d.58.1.5 PDB: 1r27_B* 1siw_B* 1y5i_B* 1y5l_B* 1y5n_B* 3ir5_B* 3ir6_B* 3ir7_B* 1y4z_B* 3egw_B*
Probab=94.83 E-value=0.0053 Score=60.69 Aligned_cols=54 Identities=22% Similarity=0.345 Sum_probs=35.6
Q ss_pred hccccccCcccC--cccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCC
Q 045926 198 KLDGLYECILCA--CCTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPK 275 (302)
Q Consensus 198 ~~~~~~~CI~CG--~C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~ 275 (302)
.......|++|+ .|+.+||....... ..++. + .. ....|+.||.|+.+||.
T Consensus 177 i~~~~~~C~~C~~~~Cv~aCP~gAI~~~--------------~~~g~----------v--~i-d~~kCigCg~Cv~~CP~ 229 (512)
T 1q16_B 177 MMYLPRLCEHCLNPACVATCPSGAIYKR--------------EEDGI----------V--LI-DQDKCRGWRMCITGCPY 229 (512)
T ss_dssp CEEEEECCCCCSSCHHHHTCTTCCEEEE--------------TTTCC----------E--EE-CTTTCCCCCCHHHHCTT
T ss_pred EEecCccCcCCCCchhhhhCCcCcEEee--------------cCCCe----------E--EE-CHHHCCCchHHHhhCCc
Confidence 345667999999 69999996432100 00110 0 01 33589999999999999
Q ss_pred CCC
Q 045926 276 GLD 278 (302)
Q Consensus 276 gI~ 278 (302)
++-
T Consensus 230 ~AI 232 (512)
T 1q16_B 230 KKI 232 (512)
T ss_dssp CCE
T ss_pred cce
Confidence 874
No 78
>1kqf_B FDH-N beta S, formate dehydrogenase, nitrate-inducible, iron-SU subunit; oxidoreductase, selenium, selenocysteine, seCys, molybdenum; HET: MGD HEM CDL; 1.60A {Escherichia coli} SCOP: d.58.1.5 f.23.22.1 PDB: 1kqg_B*
Probab=94.75 E-value=0.004 Score=57.22 Aligned_cols=51 Identities=24% Similarity=0.442 Sum_probs=34.4
Q ss_pred cccccCcccC--cccCCCCC-cccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCC
Q 045926 200 DGLYECILCA--CCTTSCPS-YWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKG 276 (302)
Q Consensus 200 ~~~~~CI~CG--~C~~aCP~-~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~g 276 (302)
.....|++|+ .|+.+||+ ..... ..++. + .. ....|+.||.|+.+||.+
T Consensus 95 ~~~~~C~~C~~~~C~~~CP~~gAi~~---------------~~~g~----------v--~i-d~~~CigCg~C~~~CP~~ 146 (294)
T 1kqf_B 95 IRKDGCMHCEDPGCLKACPSAGAIIQ---------------YANGI----------V--DF-QSENCIGCGYCIAGCPFN 146 (294)
T ss_dssp EEEESCCCBSSCHHHHHCCSTTSEEE---------------ETTSC----------E--EE-CGGGCCCCCHHHHHCTTC
T ss_pred ECcccCCCcCChhhhhhCCccCcccc---------------ccccc----------e--Ee-CcccCCCcchhhhcCCCC
Confidence 3456899999 89999997 43210 00110 0 01 235899999999999998
Q ss_pred CC
Q 045926 277 LD 278 (302)
Q Consensus 277 I~ 278 (302)
+.
T Consensus 147 ai 148 (294)
T 1kqf_B 147 IP 148 (294)
T ss_dssp CC
T ss_pred Cc
Confidence 75
No 79
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=94.63 E-value=0.049 Score=57.63 Aligned_cols=67 Identities=10% Similarity=-0.020 Sum_probs=51.5
Q ss_pred ceeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccC------CCCCccCccEEEEC---C
Q 045926 57 KVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRS------CREGICGSCAMNIG---G 127 (302)
Q Consensus 57 ~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~------C~~g~CG~C~V~Vn---G 127 (302)
+++++|.|+. ++++. .+ |.||+.||...+ ......+|+.+ |..|.|..|.|.|+ |
T Consensus 20 ~~~~~~~~dG------------~~~~~--~~-g~tv~~aL~~~G-v~~~~~s~~~~~prg~~~~~~~c~~~~v~v~~~~~ 83 (965)
T 2gag_A 20 EEALSLTVDG------------AKLSA--FR-GDTVASALLANG-VRRAGNSLYLDRPRGIFAAGVEEPNALVTVSARHE 83 (965)
T ss_dssp EEEEEEEETT------------EEEEE--EE-TCBHHHHHHHTT-CCBCSCCTTTCCCCBCCCSSTTCCSCEEEECCCST
T ss_pred CCeEEEEECC------------EEEEe--cC-CCHHHHHHHHcC-CeEeecCCCCCCCcccccCCccCCceEEEEccCCC
Confidence 4578888877 44554 45 899999999987 44677775422 78899999999999 6
Q ss_pred ----E-EeccccccccC
Q 045926 128 ----T-NTVACLKPIDG 139 (302)
Q Consensus 128 ----~-~~laC~t~v~~ 139 (302)
. ++.||.|.+.+
T Consensus 84 g~~~~~~~~ac~~~~~~ 100 (965)
T 2gag_A 84 QDIDESMLPATTVPVTE 100 (965)
T ss_dssp TCCCEEEEEGGGCBCCT
T ss_pred CCcCCccccceeeeccc
Confidence 3 56799999976
No 80
>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*
Probab=94.62 E-value=0.007 Score=55.10 Aligned_cols=51 Identities=18% Similarity=0.218 Sum_probs=35.2
Q ss_pred ccccccCcccCc--ccCCCCCcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcccccccccCCCC
Q 045926 199 LDGLYECILCAC--CTTSCPSYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRAIKNCTATCPKG 276 (302)
Q Consensus 199 ~~~~~~CI~CG~--C~~aCP~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~Cg~C~~vCP~g 276 (302)
.+....|++|+. |+.+||+ ..... .++. + .. ....|+.||.|+.+||.+
T Consensus 62 ~~~~~~C~~C~~p~C~~~CP~-Ai~~~---------------~~g~----------v--~i-d~~~CigC~~C~~~CP~~ 112 (274)
T 1ti6_B 62 NYRPTPCMHCENAPCVAKGNG-AVYQR---------------EDGI----------V--LI-DPEKAKGKKELLDTCPYG 112 (274)
T ss_dssp EEEEECCCCCTTCHHHHHTTT-SEEEC---------------TTSC----------E--EE-CTTTTTTCGGGGGGCSSC
T ss_pred eEcCCcCCCCCChHHHhhChH-Hhhhc---------------cCCc----------E--Ee-chhhccchHHHHhhCccC
Confidence 345678999999 9999998 52100 0110 0 01 335899999999999998
Q ss_pred CC
Q 045926 277 LD 278 (302)
Q Consensus 277 I~ 278 (302)
+.
T Consensus 113 Ai 114 (274)
T 1ti6_B 113 VM 114 (274)
T ss_dssp CC
T ss_pred Ce
Confidence 75
No 81
>1h0h_B Formate dehydrogenase (small subunit); tungsten selenium formate dehydrogenase, selenocysteine, molybdopterin, MGD, iron-sulphur cluster; HET: 2MD MGD EPE; 1.8A {Desulfovibrio gigas} SCOP: d.58.1.5
Probab=91.94 E-value=0.0074 Score=52.81 Aligned_cols=53 Identities=11% Similarity=0.144 Sum_probs=34.2
Q ss_pred ccccccCcccCc--ccCCCC---CcccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCc--ccccccc
Q 045926 199 LDGLYECILCAC--CTTSCP---SYWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCR--AIKNCTA 271 (302)
Q Consensus 199 ~~~~~~CI~CG~--C~~aCP---~~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~--~Cg~C~~ 271 (302)
.+....|+.|+. |+.+|| +......+ .++. + .. ....|+ .||.|+.
T Consensus 66 ~~~~~~C~~C~~p~C~~~CP~~~~gAi~~~~--------------~~g~----------v--~i-d~~~C~~~~C~~C~~ 118 (214)
T 1h0h_B 66 LFFPDQCRHCIAPPCKATADMEDESAIIHDD--------------ATGC----------V--LF-TPKTKDLEDYESVIS 118 (214)
T ss_dssp EEEEECCCCCSSCHHHHHHTTTCTTSEEECT--------------TTCC----------E--EE-CGGGGGCSCHHHHHH
T ss_pred eecCCcCcCcCCchhhccCCccccccEEecC--------------CCCe----------E--EE-eHHHCccccccHHHH
Confidence 345678999997 999999 43210000 0010 0 11 235799 9999999
Q ss_pred cCCCCCC
Q 045926 272 TCPKGLD 278 (302)
Q Consensus 272 vCP~gI~ 278 (302)
+||.++.
T Consensus 119 ~CP~~Ai 125 (214)
T 1h0h_B 119 ACPYDVP 125 (214)
T ss_dssp HCTTCCC
T ss_pred hcCCCCe
Confidence 9999875
No 82
>2fgo_A Ferredoxin; allochromatium vinosum, [4Fe-4S] cluster, reduction potential, iron binding protein electron transport; 1.32A {Pseudomonas aeruginosa}
Probab=90.09 E-value=0.11 Score=37.64 Aligned_cols=17 Identities=29% Similarity=0.780 Sum_probs=15.5
Q ss_pred ccCcccccccccCCCCC
Q 045926 261 YRCRAIKNCTATCPKGL 277 (302)
Q Consensus 261 ~~C~~Cg~C~~vCP~gI 277 (302)
..|+.||.|+.+||.++
T Consensus 6 ~~C~~C~~C~~~CP~~a 22 (82)
T 2fgo_A 6 DDCINCDVCEPECPNGA 22 (82)
T ss_dssp TTCCCCCTTGGGCTTCC
T ss_pred CCCCChhhHHHHCChhc
Confidence 57999999999999876
No 83
>2fdn_A Ferredoxin; electron transport, iron-sulfur, 4Fe-4S; 0.94A {Clostridium acidurici} SCOP: d.58.1.1 PDB: 1fdn_A 1fca_A 1clf_A 1dur_A
Probab=89.96 E-value=0.12 Score=34.32 Aligned_cols=17 Identities=24% Similarity=0.640 Sum_probs=15.5
Q ss_pred ccCcccccccccCCCCC
Q 045926 261 YRCRAIKNCTATCPKGL 277 (302)
Q Consensus 261 ~~C~~Cg~C~~vCP~gI 277 (302)
..|+.||.|+.+||.++
T Consensus 6 ~~C~~C~~C~~~CP~~a 22 (55)
T 2fdn_A 6 EACISCGACEPECPVNA 22 (55)
T ss_dssp TTCCCCCTTGGGCTTCC
T ss_pred ccCcChhhHHHHCCccc
Confidence 47999999999999986
No 84
>1rgv_A Ferredoxin; electron transport; 2.90A {Thauera aromatica} SCOP: d.58.1.1
Probab=89.66 E-value=0.11 Score=37.37 Aligned_cols=19 Identities=26% Similarity=0.566 Sum_probs=16.3
Q ss_pred cccCcccccccccCCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI~ 278 (302)
...|+.||.|+.+||.++-
T Consensus 5 ~~~C~~C~~C~~~CP~~ai 23 (80)
T 1rgv_A 5 NDDCTACDACVEECPNEAI 23 (80)
T ss_dssp CSCCCCCCTTTTTCTTCCE
T ss_pred CCCCcChhhHHHHcChhcc
Confidence 3579999999999998763
No 85
>3eun_A Ferredoxin; electron transport, [4Fe-4S] cluster, 4Fe-4S, iron, iron-sulfur, metal-binding, transport; 1.05A {Allochromatium vinosum} SCOP: d.58.1.1 PDB: 1blu_A 3exy_A
Probab=89.61 E-value=0.12 Score=37.42 Aligned_cols=18 Identities=28% Similarity=0.726 Sum_probs=16.0
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||.|+.+||.++
T Consensus 5 ~~~C~~C~~C~~~CP~~a 22 (82)
T 3eun_A 5 TDECINCDVCEPECPNGA 22 (82)
T ss_dssp CTTCCCCCTTGGGCTTCC
T ss_pred CCCCcCccchHHHCChhh
Confidence 357999999999999986
No 86
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=89.50 E-value=0.042 Score=54.80 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=17.2
Q ss_pred ccccCcccccccccCCCCCC
Q 045926 259 KLYRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 259 ~~~~C~~Cg~C~~vCP~gI~ 278 (302)
....|+.||.|..+||+++.
T Consensus 549 ~~~~Ci~C~~C~~~cp~~~i 568 (584)
T 2gmh_A 549 NAQNCVHCKTCDIKDPSQNI 568 (584)
T ss_dssp CGGGCCCCCHHHHHCTTCCE
T ss_pred eCCCCcCCCCchhhCCCCCc
Confidence 45689999999999998863
No 87
>2zvs_A Uncharacterized ferredoxin-like protein YFHL; electron transport, [4Fe-4S] clusters, iron-SULF clusters, reduction potential; 1.65A {Escherichia coli}
Probab=89.39 E-value=0.12 Score=37.79 Aligned_cols=18 Identities=22% Similarity=0.599 Sum_probs=16.0
Q ss_pred ccCcccccccccCCCCCC
Q 045926 261 YRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 261 ~~C~~Cg~C~~vCP~gI~ 278 (302)
..|+.||.|+.+||.++-
T Consensus 6 ~~C~~C~~C~~~CP~~ai 23 (85)
T 2zvs_A 6 KKCINCDMCEPECPNEAI 23 (85)
T ss_dssp TTCCCCCTTTTTCTTCCE
T ss_pred CcCcChhHHHHHCchhcc
Confidence 579999999999998863
No 88
>1jb0_C Photosystem I iron-sulfur center; membrane protein, multiprotein-pigment complex, photosynthes; HET: CL1 PQN BCR LHG LMG; 2.50A {Synechococcus elongatus} SCOP: d.58.1.2 PDB: 3pcq_C* 1k0t_A 2wsc_C* 2wse_C* 2wsf_C* 3lw5_C* 2o01_C*
Probab=88.72 E-value=0.11 Score=37.06 Aligned_cols=18 Identities=22% Similarity=0.647 Sum_probs=15.9
Q ss_pred ccCcccccccccCCCCCC
Q 045926 261 YRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 261 ~~C~~Cg~C~~vCP~gI~ 278 (302)
..|+.||.|+.+||.++-
T Consensus 8 ~~C~~Cg~C~~~CP~~a~ 25 (80)
T 1jb0_C 8 DTCIGCTQCVRACPTDVL 25 (80)
T ss_dssp TTCCCCCHHHHHCTTCCC
T ss_pred CcCcChhHHHHHCCcccc
Confidence 579999999999998763
No 89
>1rof_A Ferredoxin; electron transport, iron-sulfur; NMR {Thermotoga maritima} SCOP: d.58.1.4 PDB: 1vjw_A
Probab=87.63 E-value=0.18 Score=33.59 Aligned_cols=18 Identities=22% Similarity=0.571 Sum_probs=15.5
Q ss_pred ccCcccccccccCCCCCC
Q 045926 261 YRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 261 ~~C~~Cg~C~~vCP~gI~ 278 (302)
..|+.||.|+.+||..+.
T Consensus 8 ~~C~~C~~C~~~Cp~~~~ 25 (60)
T 1rof_A 8 DACIGCGVCENLCPDVFQ 25 (60)
T ss_dssp TTCCSCCSSTTTCTTTBC
T ss_pred hhCCCChHHHHhCcHHHe
Confidence 579999999999997554
No 90
>1xer_A Ferredoxin; electron transport, iron-sulfur, duplication; 2.00A {Sulfolobus tokodaii str} SCOP: d.58.1.3 PDB: 2vkr_A
Probab=87.56 E-value=0.14 Score=38.53 Aligned_cols=18 Identities=28% Similarity=0.534 Sum_probs=15.8
Q ss_pred ccCcccccccccCCCCCC
Q 045926 261 YRCRAIKNCTATCPKGLD 278 (302)
Q Consensus 261 ~~C~~Cg~C~~vCP~gI~ 278 (302)
..|+.||.|+.+||.++-
T Consensus 43 ~~C~~Cg~C~~~CP~~ai 60 (103)
T 1xer_A 43 DLCIADGSCINACPVNVF 60 (103)
T ss_dssp TTCCCCCHHHHHCTTCCC
T ss_pred hhCCChhhHHHHcCccCe
Confidence 579999999999998763
No 91
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=86.99 E-value=0.1 Score=50.30 Aligned_cols=18 Identities=28% Similarity=0.525 Sum_probs=15.8
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||.|..+||+++
T Consensus 283 ~~~Ci~Cg~Ci~~CP~~~ 300 (418)
T 3mm5_A 283 NRECVRCMHCINKMPKAL 300 (418)
T ss_dssp TTTCCCCCHHHHHCTTTE
T ss_pred hhhcCccChhHHhCcHhh
Confidence 458999999999999865
No 92
>1f2g_A Ferredoxin II; electron transport, FDII desulfovibrio gigas; NMR {Desulfovibrio gigas} SCOP: d.58.1.4 PDB: 1fxd_A
Probab=86.95 E-value=0.13 Score=34.28 Aligned_cols=17 Identities=29% Similarity=0.747 Sum_probs=15.3
Q ss_pred ccCcccccccccCCCCC
Q 045926 261 YRCRAIKNCTATCPKGL 277 (302)
Q Consensus 261 ~~C~~Cg~C~~vCP~gI 277 (302)
..|+.||.|+.+||..+
T Consensus 6 ~~C~~C~~C~~~CP~~~ 22 (58)
T 1f2g_A 6 DDCMACEACVEICPDVF 22 (58)
T ss_dssp TTCCCCCHHHHHCTTTE
T ss_pred CcCccchHHHHhCCccE
Confidence 68999999999999855
No 93
>1dax_A Ferredoxin I; electron transport, electron-transfer protein, 4Fe-4S cluster; NMR {Desulfovibrio africanus} SCOP: d.58.1.4 PDB: 1dfd_A 1fxr_A
Probab=86.77 E-value=0.16 Score=34.71 Aligned_cols=16 Identities=31% Similarity=0.719 Sum_probs=14.3
Q ss_pred ccCcccccccccCCCCC
Q 045926 261 YRCRAIKNCTATCPKGL 277 (302)
Q Consensus 261 ~~C~~Cg~C~~vCP~gI 277 (302)
..|+.||.|+.+|| ++
T Consensus 9 ~~C~~Cg~C~~~CP-~~ 24 (64)
T 1dax_A 9 DECIACESCVEIAP-GA 24 (64)
T ss_dssp TTCCSCCHHHHHCT-TT
T ss_pred ccCCCchHHHHhCC-cc
Confidence 57999999999999 54
No 94
>3i9v_9 NADH-quinone oxidoreductase subunit 9; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_8* 2fug_9* 3iam_9* 3ias_9* 3m9s_9*
Probab=86.18 E-value=0.2 Score=41.57 Aligned_cols=18 Identities=33% Similarity=0.707 Sum_probs=16.1
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||.|+.+||.++
T Consensus 50 ~~~Ci~C~~C~~~CP~~a 67 (182)
T 3i9v_9 50 LEKCIGCSLCAAACPAYA 67 (182)
T ss_dssp CBSCCCCCHHHHHCTTCC
T ss_pred CccCcccccchhhCCccc
Confidence 458999999999999876
No 95
>1iqz_A Ferredoxin; iron-sulfer protein, ultlahigh resolution analysis, geometry of [4Fe-4S] cluster, electron transport; 0.92A {Bacillus thermoproteolyticus} SCOP: d.58.1.4 PDB: 1ir0_A 1wtf_A*
Probab=85.26 E-value=0.21 Score=36.00 Aligned_cols=16 Identities=31% Similarity=0.542 Sum_probs=14.2
Q ss_pred cccCcccccccccCCC
Q 045926 260 LYRCRAIKNCTATCPK 275 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~ 275 (302)
...|+.||.|+.+||.
T Consensus 8 ~~~CigCg~C~~~CP~ 23 (81)
T 1iqz_A 8 KETCIACGACGAAAPD 23 (81)
T ss_dssp TTTCCCCSHHHHHCTT
T ss_pred cccCcccChhhHhCch
Confidence 3589999999999994
No 96
>7fd1_A FD1, protein (7-Fe ferredoxin I); electron transport, iron-sulfur; 1.30A {Azotobacter vinelandii} SCOP: d.58.1.2 PDB: 1fda_A 1fdb_A 1fer_A 1axq_A 5fd1_A 6fdr_A 6fd1_A 7fdr_A 1frh_A 1fri_A 1fdd_A 1frl_A 1d3w_A 1frm_A 1frx_A 1g6b_A 1pc4_A 1frj_A 2fd2_A 1fd2_A ...
Probab=83.41 E-value=0.34 Score=36.79 Aligned_cols=19 Identities=42% Similarity=0.835 Sum_probs=16.1
Q ss_pred ccccCcccCcccCCCCCcc
Q 045926 201 GLYECILCACCTTSCPSYW 219 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~ 219 (302)
+...|+.||.|+.+||...
T Consensus 35 ~~~~C~~Cg~C~~~CP~~a 53 (106)
T 7fd1_A 35 HPDECIDCALCEPECPAQA 53 (106)
T ss_dssp CTTTCCCCCTTGGGCTTCC
T ss_pred CcccCCChhhhHHhCCChh
Confidence 3467999999999999765
No 97
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=83.35 E-value=2.4 Score=31.62 Aligned_cols=60 Identities=5% Similarity=-0.064 Sum_probs=35.8
Q ss_pred ceeEEEEEEecCCCCCCCCCceeEEEEecCCCc-hhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccc--
Q 045926 57 KVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECG-PMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVAC-- 133 (302)
Q Consensus 57 ~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g-~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC-- 133 (302)
+.+++|.|+. ++++ +++ + .||.|+|.+++. .+ ...+|.|||..+-.-
T Consensus 18 ~~~M~I~vNG------------e~~e--l~~-~~~Tv~dLL~~L~~--~~-------------~~vaVavNg~iV~~~~~ 67 (87)
T 1tyg_B 18 GGRHMLQLNG------------KDVK--WKK-DTGTIQDLLASYQL--EN-------------KIVIVERNKEIIGKERY 67 (87)
T ss_dssp ----CEEETT------------EEEC--CSS-SCCBHHHHHHHTTC--TT-------------SCCEEEETTEEECGGGT
T ss_pred CcceEEEECC------------EEEE--CCC-CCCcHHHHHHHhCC--CC-------------CCEEEEECCEECChhhc
Confidence 3455788887 3344 445 6 899999999862 11 126899999876422
Q ss_pred -cccccCCCCCceEEc
Q 045926 134 -LKPIDGDTSKPTIIT 148 (302)
Q Consensus 134 -~t~v~~~~~~~~~Ie 148 (302)
.+.+.+ ++.+.|-
T Consensus 68 ~~~~L~d--GD~Vei~ 81 (87)
T 1tyg_B 68 HEVELCD--RDVIEIV 81 (87)
T ss_dssp TTSBCCS--SSEEEEE
T ss_pred CCcCCCC--CCEEEEE
Confidence 456665 4455443
No 98
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=82.45 E-value=0.62 Score=42.43 Aligned_cols=30 Identities=30% Similarity=0.616 Sum_probs=22.4
Q ss_pred ccccCcccccccccCCCCC-------CHHHHHHHHHH
Q 045926 259 KLYRCRAIKNCTATCPKGL-------DPADAIHKMKT 288 (302)
Q Consensus 259 ~~~~C~~Cg~C~~vCP~gI-------~~~~~I~~lR~ 288 (302)
.++.|+.||.|..+||+.. -|..++...|.
T Consensus 178 ~~~~CI~CG~C~~aCP~~~~~~~~~lGP~~li~a~r~ 214 (282)
T 3vr8_B 178 GLYECILCACCSASCPSYWWNADKYLGPAVLMQAYRW 214 (282)
T ss_pred hhhhCcccCcCcccCCceeccCCcCCCHHHHHHHHHH
Confidence 6789999999999999763 25555555543
No 99
>2v2k_A Ferredoxin; iron, transport, iron-sulfur, mycobacterium tuberculosis, Fe cluster, metal-binding, electron transfer, transport; 1.6A {Mycobacterium smegmatis}
Probab=82.33 E-value=0.4 Score=36.21 Aligned_cols=19 Identities=32% Similarity=0.746 Sum_probs=16.2
Q ss_pred ccccCcccCcccCCCCCcc
Q 045926 201 GLYECILCACCTTSCPSYW 219 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~ 219 (302)
+...|+.||.|+.+||...
T Consensus 35 ~~~~C~~Cg~C~~~CP~~A 53 (105)
T 2v2k_A 35 HPDECVDCGACEPVCPVEA 53 (105)
T ss_dssp CTTTCCCCCCSGGGCTTCC
T ss_pred eCCcCcchhhHHHhCCccC
Confidence 4567999999999999854
No 100
>1bc6_A 7-Fe ferredoxin; electron transport, iron-sulfur; NMR {Bacillus schlegelii} SCOP: d.58.1.2 PDB: 1bd6_A 1bqx_A 1bwe_A
Probab=81.66 E-value=0.49 Score=33.53 Aligned_cols=18 Identities=22% Similarity=0.536 Sum_probs=15.7
Q ss_pred cccCcc--cccccccCCCCC
Q 045926 260 LYRCRA--IKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~--Cg~C~~vCP~gI 277 (302)
...|+. ||.|+.+||.++
T Consensus 5 ~~~C~~c~C~~C~~~Cp~~a 24 (77)
T 1bc6_A 5 TEPCIGTKDASCVEVCPVDC 24 (77)
T ss_dssp CSTTTTCCCCSSTTTCTTCC
T ss_pred CccCCCCCcchhHHhccccc
Confidence 357999 999999999986
No 101
>1dwl_A Ferredoxin I; electron transfer, model, heteronuclear docking; HET: HEC; NMR {Desulfomicrobium norvegicum} SCOP: i.4.1.1
Probab=81.49 E-value=0.5 Score=31.13 Aligned_cols=18 Identities=22% Similarity=0.660 Sum_probs=14.9
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||.|+.+||..+
T Consensus 6 ~~~C~~C~~C~~~Cp~~~ 23 (59)
T 1dwl_A 6 HEECIGCESCVELCPEVF 23 (59)
T ss_dssp SCCCSSCCGGGGTSTTTE
T ss_pred hhhCcChhHHHHHCCHHh
Confidence 357999999999999643
No 102
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=79.34 E-value=0.82 Score=40.21 Aligned_cols=25 Identities=20% Similarity=0.445 Sum_probs=19.9
Q ss_pred cCCCCCccCccEEEEC-C--EEeccccc
Q 045926 111 RSCREGICGSCAMNIG-G--TNTVACLK 135 (302)
Q Consensus 111 ~~C~~g~CG~C~V~Vn-G--~~~laC~t 135 (302)
..|..|+||+|.|.+. + ...+.|..
T Consensus 224 m~CG~G~C~~C~~~~~~~~~~~~~~C~d 251 (262)
T 1ep3_B 224 MACGIGACYACVEHDKEDESHALKVCED 251 (262)
T ss_dssp CSSSSSSSCTTEEEETTEEEEEEETTTT
T ss_pred ccCcccccccCCcccccCCCceeEEeCC
Confidence 4599999999999986 2 35678864
No 103
>1sj1_A Ferredoxin; thermostability, iron-sulfur cluster, hexammine cobalt(III), electron transport; HET: NCO; 1.50A {Pyrococcus furiosus} SCOP: d.58.1.4 PDB: 1siz_A* 2z8q_A 3pni_A
Probab=79.29 E-value=0.43 Score=32.25 Aligned_cols=18 Identities=22% Similarity=0.523 Sum_probs=14.9
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||.|+.+||..+
T Consensus 8 ~~~C~~C~~C~~~Cp~~~ 25 (66)
T 1sj1_A 8 QDTCIGDAICASLCPDVF 25 (66)
T ss_dssp TTTCCCCCHHHHHCTTTE
T ss_pred cccCcCchHHHHhCCceE
Confidence 357999999999999633
No 104
>2l32_A Small archaeal modifier protein 2; protein BIN; NMR {Haloferax volcanii}
Probab=78.98 E-value=1.6 Score=31.41 Aligned_cols=46 Identities=7% Similarity=0.110 Sum_probs=31.7
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEec
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTV 131 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~l 131 (302)
++++++|.+ ..-++++++ |.|+.|.|.+++.. | . ..+|.+||+.+.
T Consensus 2 ~v~Vkl~g~-----------~~~~~ev~~-g~Tv~dLL~~Lgl~--~----~---------~VvV~vNG~~v~ 47 (74)
T 2l32_A 2 NVTVEVVGE-----------ETSEVAVDD-DGTYADLVRAVDLS--P----H---------EVTVLVDGRPVP 47 (74)
T ss_dssp EEEEECSSS-----------SEEEEECST-TCSHHHHHHTTCCC--S----S---------CCCEECCCCCCC
T ss_pred EEEEEEeCc-----------cceeEEcCC-CCcHHHHHHHcCCC--c----c---------eEEEEECCEECC
Confidence 477888863 123456767 89999999998742 1 1 147999998553
No 105
>1h98_A Ferredoxin; electron transport, thermophilic, iron-sulfur, azotobacter, hydrogen bonds, stability, high resolution; 1.64A {Thermus aquaticus} SCOP: d.58.1.2
Probab=78.96 E-value=0.49 Score=33.70 Aligned_cols=17 Identities=24% Similarity=0.612 Sum_probs=15.2
Q ss_pred ccCcc--cccccccCCCCC
Q 045926 261 YRCRA--IKNCTATCPKGL 277 (302)
Q Consensus 261 ~~C~~--Cg~C~~vCP~gI 277 (302)
..|+. ||.|+.+||.++
T Consensus 6 ~~C~~c~C~~C~~~CP~~a 24 (78)
T 1h98_A 6 EPCIGVKDQSCVEVCPVEC 24 (78)
T ss_dssp GGGTTTCCCHHHHHCTTCC
T ss_pred hhCCCCCcChhhhhcCccc
Confidence 47999 999999999975
No 106
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=77.39 E-value=0.74 Score=40.21 Aligned_cols=19 Identities=21% Similarity=0.663 Sum_probs=16.6
Q ss_pred ccccCcccCcccCCCCCcc
Q 045926 201 GLYECILCACCTTSCPSYW 219 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~ 219 (302)
....|+.||.|+.+||+..
T Consensus 202 ~~~~C~~Cg~C~~vCP~gi 220 (238)
T 2wdq_B 202 SVFRCHSIMNCVSVCPKGL 220 (238)
T ss_dssp TTTTCCCCCHHHHHCTTCC
T ss_pred CCCcCcccchhhhhcCCCC
Confidence 5678999999999999864
No 107
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=77.37 E-value=4.5 Score=29.35 Aligned_cols=53 Identities=13% Similarity=0.137 Sum_probs=31.5
Q ss_pred eEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccc---cccccCCCCCceEEc
Q 045926 79 QSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVAC---LKPIDGDTSKPTIIT 148 (302)
Q Consensus 79 ~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC---~t~v~~~~~~~~~Ie 148 (302)
++++++..+ +.||.++|.+++.. .+ ..++|.|||..+-.- .|.+.+ ++.+.|-
T Consensus 8 e~~e~~~~~-~~Tl~~LL~~l~~~-~~-------------~~vAVavNg~iVpr~~~~~~~L~d--GD~IEIv 63 (78)
T 2k5p_A 8 KPSTVDGAE-SLNVTELLSALKVA-QA-------------EYVTVELNGEVLEREAFDATTVKD--GDAVEFL 63 (78)
T ss_dssp EEEECSSCS-CEEHHHHHHHHTCS-CT-------------TTCCEEETTEECCTTHHHHCEECS--SBCEEEC
T ss_pred EEEEcCCCC-CCcHHHHHHHcCCC-CC-------------CcEEEEECCEECChHHcCcccCCC--CCEEEEE
Confidence 445543215 79999999998731 01 126899999865432 355655 4444443
No 108
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=76.23 E-value=0.82 Score=40.47 Aligned_cols=19 Identities=37% Similarity=0.821 Sum_probs=16.6
Q ss_pred ccccCcccCcccCCCCCcc
Q 045926 201 GLYECILCACCTTSCPSYW 219 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~ 219 (302)
.+..|+.||.|+.+||...
T Consensus 211 ~~~~C~~Cg~C~~~CP~~i 229 (252)
T 2h88_B 211 SLYRCHTIMNCTRTCPKGL 229 (252)
T ss_dssp TTTTCCCCCHHHHHCTTCC
T ss_pred CCCcCccccchhhhcCCCC
Confidence 5678999999999999754
No 109
>3rpf_C Molybdopterin converting factor, subunit 1 (MOAD); MCSG, PSI-biology, structural genomics, midwest center for S genomics, transferase; 1.90A {Helicobacter pylori}
Probab=75.80 E-value=8.1 Score=27.23 Aligned_cols=68 Identities=13% Similarity=0.235 Sum_probs=41.0
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEecccccccc
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPID 138 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v~ 138 (302)
|++++.|..= . + +++ ++ + +.||-|++..+.. .|.|.-.. ..+.|-|||+.+..=.+.+.
T Consensus 2 ~v~V~~fa~l--~-~-----~~~--e~-~-~~tv~~ll~~L~~--~~~l~~~l-------~~~~vavN~~~v~~~~~~l~ 60 (74)
T 3rpf_C 2 MVEVRFFGPI--K-E-----ENF--FI-K-ANDLKELRAILQE--KEGLKEWL-------GVCAIALNDHLIDNLNTPLK 60 (74)
T ss_dssp EEEEEECTTC--C-C-----CCE--EE-E-CSSHHHHHHHHHT--CTTTTTTT-------TTCEEEESSSEECCTTCCCC
T ss_pred EEEEEEEeec--c-e-----eEE--ee-C-CCcHHHHHHHHHH--CcCHHHHh-------hccEEEECCEEcCCCCcCCC
Confidence 4677777622 1 1 334 44 4 7899999998863 25443211 34899999998655456665
Q ss_pred CCCCCceEEcc
Q 045926 139 GDTSKPTIITP 149 (302)
Q Consensus 139 ~~~~~~~~Iep 149 (302)
+ ++.+.|-|
T Consensus 61 ~--gDeV~i~P 69 (74)
T 3rpf_C 61 D--GDVISLLP 69 (74)
T ss_dssp T--TCEEEEEC
T ss_pred C--CCEEEEEC
Confidence 5 44555543
No 110
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=75.55 E-value=1.3 Score=42.59 Aligned_cols=29 Identities=21% Similarity=0.422 Sum_probs=26.0
Q ss_pred cccCccccc--ccccCCCCCCHHHHHHHHHH
Q 045926 260 LYRCRAIKN--CTATCPKGLDPADAIHKMKT 288 (302)
Q Consensus 260 ~~~C~~Cg~--C~~vCP~gI~~~~~I~~lR~ 288 (302)
..+|..||. |...||.++++.+.|..+++
T Consensus 19 a~rc~~c~~~~C~~~CP~~~~i~~~~~~~~~ 49 (456)
T 2vdc_G 19 ANRCSQCGVPFCQVHCPVSNNIPDWLKLTSE 49 (456)
T ss_dssp HHHSCCCSSCHHHHTSTTCCCHHHHHHHHHH
T ss_pred HHhhhcCCCchhhcCCCCCCcHHHHHHHHHC
Confidence 458999997 99999999999999988875
No 111
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=74.71 E-value=0.99 Score=39.49 Aligned_cols=19 Identities=26% Similarity=0.910 Sum_probs=16.7
Q ss_pred ccccCcccCcccCCCCCcc
Q 045926 201 GLYECILCACCTTSCPSYW 219 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~ 219 (302)
+...|+.||.|+.+||+..
T Consensus 200 ~~~~C~~Cg~C~~vCP~gi 218 (243)
T 1kf6_B 200 GVWSCTFVGYCSEVCPKHV 218 (243)
T ss_dssp TGGGCCCCCHHHHHCTTCC
T ss_pred CcccCcccCCcchhCCCCC
Confidence 5678999999999999854
No 112
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=74.47 E-value=4.5 Score=28.53 Aligned_cols=54 Identities=6% Similarity=-0.020 Sum_probs=34.0
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccccCCCCCceEEc
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIIT 148 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v~~~~~~~~~Ie 148 (302)
.++++.+ +.||.|++..++.. .|.+. ++ .|.|.|||+.+-. .+.+.+ ++.+.|-
T Consensus 18 ~~~~~~~-~~tv~~ll~~l~~~-~p~~~-------~v--~~~v~vNg~~v~~-~~~L~~--gD~V~i~ 71 (77)
T 2q5w_D 18 EDIVLEQ-ALTVQQFEDLLFER-YPQIN-------NK--KFQVAVNEEFVQK-SDFIQP--NDTVALI 71 (77)
T ss_dssp EECCCSS-CEEHHHHHHHHHHH-CGGGT-------TC--CCEEEETTEEECT-TSEECT--TCEEEEE
T ss_pred EEEECCC-CCCHHHHHHHHHHH-Ccchh-------cc--eEEEEECCEECCC-CCCcCC--CCEEEEE
Confidence 3556656 89999999988643 23321 12 4799999987643 366665 4445443
No 113
>1jnr_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: d.58.1.5 PDB: 1jnz_B* 2fja_B* 2fjb_B* 2fjd_B* 2fje_B*
Probab=74.01 E-value=0.56 Score=38.37 Aligned_cols=19 Identities=26% Similarity=0.532 Sum_probs=16.1
Q ss_pred ccccCcccCcccCCCCCcc
Q 045926 201 GLYECILCACCTTSCPSYW 219 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~ 219 (302)
+...|+.||.|+.+||...
T Consensus 43 d~~~C~~Cg~Cv~~CP~~A 61 (150)
T 1jnr_B 43 EPDMCWECYSCVKMCPQGA 61 (150)
T ss_dssp CGGGCCCCCHHHHHCTTCC
T ss_pred CcccCcCHhHHHHhCCccc
Confidence 3467999999999999864
No 114
>2l05_A Serine/threonine-protein kinase B-RAF; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}
Probab=73.68 E-value=13 Score=28.22 Aligned_cols=75 Identities=23% Similarity=0.242 Sum_probs=48.8
Q ss_pred EEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE--CCE-Eecccccc
Q 045926 60 KEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI--GGT-NTVACLKP 136 (302)
Q Consensus 60 ~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V--nG~-~~laC~t~ 136 (302)
..|++|= |.. |.-.|++.+ |+|+-|||.++=. -|.- .+-.|+|-. +|. ...+=.|-
T Consensus 18 ~~irvhL--PNq-------QrT~V~Vrp-G~tlrdAL~KaLk-------~R~L----~pe~C~Vy~~~~~~~~~IdWdtD 76 (95)
T 2l05_A 18 PIVRVFL--PNK-------QRTVVPARC-GVTVRDSLKKALM-------MRGL----IPECCAVYRIQDGEKKPIGWDTD 76 (95)
T ss_dssp CEEEEEE--TTT-------EEEEEECCT-TCBHHHHHHHHHH-------HHTC----CGGGEEEEEEETTEEEEECTTSB
T ss_pred cEEEEEC--CCC-------CeEEEEecC-CcCHHHHHHHHHH-------HcCC----CHHHcEEEEcCCCCccccchhHh
Confidence 3677776 444 667789988 9999999987421 1211 233488874 573 44454555
Q ss_pred ccCCCCCceEEccCCCchh
Q 045926 137 IDGDTSKPTIITPLPHMFV 155 (302)
Q Consensus 137 v~~~~~~~~~Iepl~~~~v 155 (302)
+....++.+.|+-+.+||+
T Consensus 77 i~~L~~eEL~Ve~ld~~P~ 95 (95)
T 2l05_A 77 ISWLTGEELHVEVLENVPL 95 (95)
T ss_dssp GGGGTTCEEEEEESCCSCC
T ss_pred hhhccCcEEEEEEecCCCC
Confidence 5544577888988888763
No 115
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=73.21 E-value=1.1 Score=39.10 Aligned_cols=20 Identities=30% Similarity=0.919 Sum_probs=17.1
Q ss_pred cccccCcccCcccCCCCCcc
Q 045926 200 DGLYECILCACCTTSCPSYW 219 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~~~ 219 (302)
.....|+.||.|+.+||...
T Consensus 203 ~~~~~C~~Cg~C~~vCP~~i 222 (241)
T 2bs2_B 203 DGVFGCMTLLACHDVCPKNL 222 (241)
T ss_dssp TTGGGCCCCCHHHHHCTTCC
T ss_pred cCcccCcccChhhHhcCCCC
Confidence 45778999999999999754
No 116
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=72.45 E-value=5.5 Score=28.43 Aligned_cols=42 Identities=12% Similarity=0.158 Sum_probs=27.5
Q ss_pred chhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccc---cccccCCCCCceEE
Q 045926 89 GPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVAC---LKPIDGDTSKPTII 147 (302)
Q Consensus 89 g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC---~t~v~~~~~~~~~I 147 (302)
+.||.+.|.+++. .+ ..++|.|||..+-.- .|.+.+ ++.+.|
T Consensus 14 ~~Tl~~LL~~l~~--~~-------------~~vAV~vNg~iVpr~~~~~~~L~d--GD~veI 58 (73)
T 2kl0_A 14 SASVAALMTELDC--TG-------------GHFAVALNYDVVPRGKWDETPVTA--GDEIEI 58 (73)
T ss_dssp CSBHHHHHHHTTC--CS-------------SSCEEEESSSEECHHHHTTCBCCT--TCEEEE
T ss_pred CCcHHHHHHHcCC--CC-------------CcEEEEECCEECChHHcCcccCCC--CCEEEE
Confidence 7999999999873 21 126999999865432 455655 344443
No 117
>3u7z_A Putative metal binding protein rumgna_00854; the binding protein, transport protein, structural genomics, center for structural genomics; 1.30A {Ruminococcus gnavus}
Probab=72.38 E-value=4.5 Score=31.06 Aligned_cols=37 Identities=5% Similarity=0.084 Sum_probs=27.0
Q ss_pred ccceeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcc
Q 045926 55 VKKVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIK 100 (302)
Q Consensus 55 ~~~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~ 100 (302)
.+++.++|.|..-+.+ -..|.|+ .+ |.+|+|+|....
T Consensus 4 ~g~k~i~i~v~~~~~~-------~~~~~v~-t~-g~tL~dvLk~~~ 40 (101)
T 3u7z_A 4 EGEKHITVTVIHGDQT-------ENVFEFD-TD-AKYLGEVLESEN 40 (101)
T ss_dssp -CCEEEEEEEECTTSC-------EEEEEEE-EC-CSBHHHHHHHTT
T ss_pred cceeEEEEEEEcCCCc-------eeEEEEc-CC-ccHHHHHHHHcC
Confidence 4567788888874433 2668888 66 899999998765
No 118
>3gyx_B Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=72.20 E-value=0.67 Score=38.59 Aligned_cols=19 Identities=26% Similarity=0.551 Sum_probs=16.3
Q ss_pred ccccCcccCcccCCCCCcc
Q 045926 201 GLYECILCACCTTSCPSYW 219 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~ 219 (302)
+...|+.||.|+.+||...
T Consensus 42 d~~~C~~Cg~Cv~~CP~~A 60 (166)
T 3gyx_B 42 EPEACWECYSCIKICPQGA 60 (166)
T ss_dssp CGGGCCCCCHHHHHCSSCC
T ss_pred CcccCcccChHhHhCCccc
Confidence 3467999999999999865
No 119
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=72.14 E-value=1.5 Score=45.48 Aligned_cols=26 Identities=23% Similarity=0.611 Sum_probs=21.7
Q ss_pred cccCcccccccccCCCCCCHHHHHHH
Q 045926 260 LYRCRAIKNCTATCPKGLDPADAIHK 285 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI~~~~~I~~ 285 (302)
...|+.||.|..+||.++.+.+++..
T Consensus 414 ~~~Ci~CG~C~~~CP~~~~~~~il~~ 439 (807)
T 3cf4_A 414 VAKCADCGACLLACPEEIDIPEAMGF 439 (807)
T ss_dssp HHHCCCCCHHHHHCTTCCCHHHHHHH
T ss_pred HHhCCCCCchhhhCCCCCchHHHHHH
Confidence 45799999999999999987666543
No 120
>3i9v_1 NADH-quinone oxidoreductase subunit 1; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_1* 2fug_1* 3iam_1* 3ias_1* 3m9s_1*
Probab=70.87 E-value=0.62 Score=45.04 Aligned_cols=73 Identities=14% Similarity=0.226 Sum_probs=47.4
Q ss_pred ccccCcccCcccCCCCC-cccCCCCcccHHHHHHHHHHhccCcchhHHHHHHHhhhcccccccCcc-cccccccCCCCCC
Q 045926 201 GLYECILCACCTTSCPS-YWWNPEEYLGPAALLHAYRWICDSRDELTEERLQALTEDERKLYRCRA-IKNCTATCPKGLD 278 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~-~~~~~~~~lgP~~l~~a~r~~~d~rd~~~~~rl~~~~~~~~~~~~C~~-Cg~C~~vCP~gI~ 278 (302)
.-..|.+|+-|...||. . ...+..+..+... .+.++.+. .+..|.. |+.|...|+...+
T Consensus 349 ~~ESCgqCtpCr~Gt~~~l-------------~~lL~ri~~G~g~--~~dld~L~----~l~~~i~~~s~C~lg~~A~~P 409 (438)
T 3i9v_1 349 AHESCGKCTPCREGVAGFM-------------VNLFAKIGTGQGE--EKDVENLE----ALLPLIEGRSFCPLADAAVWP 409 (438)
T ss_dssp HHHCCSCCHHHHTTTTTHH-------------HHHHHHHTTTCCC--HHHHHHHH----HHHHHHTTCCSSTHHHHHHHH
T ss_pred hhhhCCCCccchhhHHHHH-------------HHHHHHHHhCCCC--HHHHHHHH----HHHHHHccCCCCcCcHhHHHH
Confidence 44689999999999993 2 2222223333322 12233222 2334554 9999999999999
Q ss_pred HHHHHHHHHHHHhh
Q 045926 279 PADAIHKMKTKHML 292 (302)
Q Consensus 279 ~~~~I~~lR~~l~~ 292 (302)
+...|+.-|.++..
T Consensus 410 v~s~l~~Fr~E~ea 423 (438)
T 3i9v_1 410 VKGSLRHFKDQYLA 423 (438)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 99999999877654
No 121
>2hj1_A Hypothetical protein; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; 2.10A {Haemophilus influenzae} SCOP: d.15.3.4
Probab=70.16 E-value=11 Score=28.65 Aligned_cols=50 Identities=10% Similarity=0.014 Sum_probs=31.9
Q ss_pred eEEEEecCCCchhHHHHHHHcccc-cCCCcccccCCCCCccCccEEEECCEEeccccccccC
Q 045926 79 QSYHVDLSECGPMVLDALQKIKAE-TDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDG 139 (302)
Q Consensus 79 ~~y~v~~~~~g~tvLdal~~i~~~-~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v~~ 139 (302)
..+.+++.+ |.||.|+|...|.. .-|.+... ...|.|||+.+- -.+.+.+
T Consensus 26 ~~~~~~v~~-g~TV~daI~~~gi~~~~peIdl~---------~~~V~Vng~~v~-~d~~L~d 76 (97)
T 2hj1_A 26 YLKSFQVDE-GITVQTAITQSGILSQFPEIDLS---------TNKIGIFSRPIK-LTDVLKE 76 (97)
T ss_dssp EEEEEEEET-TCBHHHHHHHHTHHHHCTTCCTT---------TSEEEEEECSCC-TTCBCCT
T ss_pred EEEEEEcCC-CCcHHHHHHHcCCCccCCccccc---------ccEEEEcCEECC-CCccCCC
Confidence 445566667 99999999998742 12222221 268999998664 4445554
No 122
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=69.73 E-value=1.2 Score=42.28 Aligned_cols=18 Identities=33% Similarity=0.551 Sum_probs=15.5
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||.|..+||.++
T Consensus 255 ~~~Ci~Cg~C~~~CP~~A 272 (386)
T 3or1_B 255 NDRCMYCGNCYTMCPALP 272 (386)
T ss_dssp TTTCCCCCHHHHHCTTCC
T ss_pred CCcCCccccHHHhCcHhh
Confidence 358999999999999943
No 123
>1hfe_L Protein (Fe-only hydrogenase (E.C.1.18.99.1) (larger subunit)); hydrogene metabolism, periplasm; 1.60A {Desulfovibrio vulgaris subsp} SCOP: c.96.1.1 d.58.1.5 PDB: 1e08_A* 1gx7_A*
Probab=69.26 E-value=1.4 Score=42.08 Aligned_cols=20 Identities=35% Similarity=0.763 Sum_probs=16.6
Q ss_pred ccccCcccCcccCCCCCccc
Q 045926 201 GLYECILCACCTTSCPSYWW 220 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~~ 220 (302)
+...|+.||.|+.+||+...
T Consensus 62 ~~~~C~~Cg~C~~~CP~~Ai 81 (421)
T 1hfe_L 62 HIEACINCGQCLTHCPENAI 81 (421)
T ss_dssp CGGGCCCCCTTGGGCTTCCE
T ss_pred ChhhCCchhhHHHhhCcCCc
Confidence 34679999999999998653
No 124
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=67.48 E-value=1.4 Score=41.40 Aligned_cols=18 Identities=28% Similarity=0.608 Sum_probs=15.7
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||.|..+||.++
T Consensus 238 ~~~C~~Cg~C~~~CP~~A 255 (366)
T 3mm5_B 238 VEKCMYCGNCYTMCPGMP 255 (366)
T ss_dssp GGGCCCCCHHHHHCTTCC
T ss_pred hhhCCCcchHHHhCCHhh
Confidence 357999999999999963
No 125
>3ny5_A Serine/threonine-protein kinase B-RAF; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics consortium; HET: MSE; 1.99A {Homo sapiens} SCOP: d.15.1.0
Probab=66.79 E-value=29 Score=26.25 Aligned_cols=77 Identities=21% Similarity=0.166 Sum_probs=49.9
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECC---EEeccccc
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGG---TNTVACLK 135 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG---~~~laC~t 135 (302)
+-+|++|= |.. |.=.|++.+ |+|+-|||.++=. -|. =.+-.|+|-.-+ ....+=.|
T Consensus 13 ~~~irvhL--PNq-------QrT~V~Vrp-G~tlrdaL~KaLk-------~R~----L~pe~C~Vy~~~~~~~~~I~Wdt 71 (96)
T 3ny5_A 13 KPIVRVFL--PNK-------QRTVVPARC-GVTVRDSLKKALM-------MRG----LIPECCAVYRIQDGEKKPIGWDT 71 (96)
T ss_dssp SCEEEEEE--TTT-------EEEEEECCT-TCBHHHHHHHHHH-------TTT----CCGGGEEEEECC---CEEECTTB
T ss_pred hCEEEEEC--CCC-------ceEEEEecC-CcCHHHHHHHHHH-------HcC----CChHHeEEEEccCCCcCcccccc
Confidence 45677776 444 667789988 9999999987521 111 123348988753 23344444
Q ss_pred cccCCCCCceEEccCCCchhh
Q 045926 136 PIDGDTSKPTIITPLPHMFVI 156 (302)
Q Consensus 136 ~v~~~~~~~~~Iepl~~~~vi 156 (302)
-+....++.+.+|-|.++|.+
T Consensus 72 Di~~L~geEL~Ve~ld~~plt 92 (96)
T 3ny5_A 72 DISWLTGEELHVEVLENVPLT 92 (96)
T ss_dssp BGGGGTTCEEEEEECCCCCBC
T ss_pred cchhcccceEEehhhhcCCCc
Confidence 444445678889988888764
No 126
>3hvz_A Uncharacterized protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.20A {Clostridium leptum}
Probab=65.82 E-value=12 Score=27.08 Aligned_cols=60 Identities=10% Similarity=0.165 Sum_probs=35.5
Q ss_pred EEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccccCCCC
Q 045926 63 RIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTS 142 (302)
Q Consensus 63 ~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v~~~~~ 142 (302)
+|+-|-|+. ..+++ +. |.|++|++..|... |.- .| .+++|||+.+-. .+++.+ +
T Consensus 7 ~i~v~tP~G-------~~~~l--p~-GaT~~D~A~~Ih~~----lg~--~~-------v~AkVNG~~v~L-~~~L~~--g 60 (78)
T 3hvz_A 7 EVFVFTPKG-------DVISL--PI-GSTVIDFAYAIHSA----VGN--RM-------IGAKVDGRIVPI-DYKVKT--G 60 (78)
T ss_dssp EEEEECTTS-------CEEEE--ET-TCBHHHHHHHHCHH----HHH--TE-------EEEEETTEEECT-TCBCCT--T
T ss_pred eEEEECCCC-------CEEEe--cC-CCCHHHHHHHhhhh----hhc--ce-------EEEEECCEEcCC-CcccCC--C
Confidence 355566765 23444 45 99999999887532 221 12 568999986532 355655 3
Q ss_pred CceEEc
Q 045926 143 KPTIIT 148 (302)
Q Consensus 143 ~~~~Ie 148 (302)
..+.|-
T Consensus 61 d~VeIi 66 (78)
T 3hvz_A 61 EIIDVL 66 (78)
T ss_dssp CBEEEE
T ss_pred CEEEEE
Confidence 444443
No 127
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=65.12 E-value=6.4 Score=27.16 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=27.2
Q ss_pred EecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccc---cccccC
Q 045926 83 VDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVAC---LKPIDG 139 (302)
Q Consensus 83 v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC---~t~v~~ 139 (302)
+++.+ +.||.++|.+++. .+ ..++|.|||..+-.- .|.+.+
T Consensus 10 ~~~~~-~~tv~~ll~~l~~--~~-------------~~v~vavN~~~v~~~~~~~~~L~~ 53 (66)
T 1f0z_A 10 MQCAA-GQTVHELLEQLDQ--RQ-------------AGAALAINQQIVPREQWAQHIVQD 53 (66)
T ss_dssp ECCCT-TCCHHHHHHHHTC--CC-------------SSEEEEETTEEECHHHHTTCCCCT
T ss_pred EEcCC-CCcHHHHHHHcCC--CC-------------CCEEEEECCEECCchhcCCcCCCC
Confidence 34445 8999999998862 11 126899999876422 456655
No 128
>3or1_B Sulfite reductase beta; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_B* 2v4j_B* 2xsj_B*
Probab=62.78 E-value=1.7 Score=41.22 Aligned_cols=21 Identities=29% Similarity=0.637 Sum_probs=17.5
Q ss_pred ccccccCcccCcccCCCCCcc
Q 045926 199 LDGLYECILCACCTTSCPSYW 219 (302)
Q Consensus 199 ~~~~~~CI~CG~C~~aCP~~~ 219 (302)
..+..+|+.||.|+.+||...
T Consensus 252 ~id~~~Ci~Cg~C~~~CP~~A 272 (386)
T 3or1_B 252 AINNDRCMYCGNCYTMCPALP 272 (386)
T ss_dssp EECTTTCCCCCHHHHHCTTCC
T ss_pred ccCCCcCCccccHHHhCcHhh
Confidence 345678999999999999844
No 129
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=61.18 E-value=16 Score=26.43 Aligned_cols=65 Identities=17% Similarity=0.174 Sum_probs=38.2
Q ss_pred EEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCcc-CccEEEECCEEeccccccccCCCCCceEEcc
Q 045926 80 SYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGIC-GSCAMNIGGTNTVACLKPIDGDTSKPTIITP 149 (302)
Q Consensus 80 ~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~C-G~C~V~VnG~~~laC~t~v~~~~~~~~~Iep 149 (302)
+.++++++ +.||-|++..+... .|.+.-+---..|.= ..+.|.|||+.+-. .+.+.+ ++.+.|-|
T Consensus 19 ~~~~~~~~-~~Tv~~ll~~L~~~-~p~~~~~~l~~~g~l~~~~~v~VN~~~v~~-~~~l~~--gDeV~i~P 84 (89)
T 3po0_A 19 TVRVDVDG-DATVGDALDALVGA-HPALESRVFGDDGELYDHINVLRNGEAAAL-GEATAA--GDELALFP 84 (89)
T ss_dssp EEEEECCT-TCBHHHHHHHHHHH-CGGGHHHHBCTTSCBCTTSEEEETTEECCT-TSBCCT--TCEEEEEC
T ss_pred eEEEECCC-CCcHHHHHHHHHHH-CcHHHHHHhccCCcccccEEEEECCEECCC-CcccCC--CCEEEEEC
Confidence 35677766 79999999988643 455432100001111 13899999987754 566665 44555443
No 130
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=60.97 E-value=18 Score=26.78 Aligned_cols=84 Identities=12% Similarity=0.133 Sum_probs=44.3
Q ss_pred ceeEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCccccc-CCCCCccCccEEEECCEEeccccc
Q 045926 57 KVMKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRR-SCREGICGSCAMNIGGTNTVACLK 135 (302)
Q Consensus 57 ~~~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~-~C~~g~CG~C~V~VnG~~~laC~t 135 (302)
+.+++|+.|-.=.+. .+ ..+.++++.+ +.||-+++..+... .|.|.-.- ......=..+.|.|||+.+-. .|
T Consensus 9 ~~~v~V~~FA~lre~---~g-~~~~~~e~~~-~~Tv~~Ll~~L~~~-~p~l~~~l~~~~g~~~~~v~v~VNg~~v~~-~~ 81 (98)
T 1vjk_A 9 SVKVKVKYFARFRQL---AG-VDEEEIELPE-GARVRDLIEEIKKR-HEKFKEEVFGEGYDEDADVNIAVNGRYVSW-DE 81 (98)
T ss_dssp CEEEEEEECTHHHHH---HS-SSEEEEEECT-TCBHHHHHHHHHHH-CGGGGGSCBCSSSCTTSSBEEEETTBCCCT-TC
T ss_pred cEEEEEEEhHHHHHH---hC-CCeEEEECCC-CCCHHHHHHHHHhH-ChhHHHHhhccccccCCcEEEEECCEECCC-CC
Confidence 346777777521110 11 1234566656 79999999987643 34432211 111111234799999986642 55
Q ss_pred cccCCCCCceEEcc
Q 045926 136 PIDGDTSKPTIITP 149 (302)
Q Consensus 136 ~v~~~~~~~~~Iep 149 (302)
.+.+ ++.+.|-|
T Consensus 82 ~L~d--GDeV~i~p 93 (98)
T 1vjk_A 82 ELKD--GDVVGVFP 93 (98)
T ss_dssp BCCT--TCEEEEES
T ss_pred CCCC--CCEEEEEC
Confidence 6655 44555443
No 131
>2c42_A Pyruvate-ferredoxin oxidoreductase; 4Fe-4S, iron, iron-sulfur, iron-sulfur cluster, pyruvate catabolism, TPP-dependent enzyme; HET: TPP; 1.78A {Desulfovibrio africanus} SCOP: c.36.1.8 c.36.1.12 c.48.1.3 c.64.1.1 d.58.1.5 PDB: 1b0p_A* 1kek_A* 2c3o_A* 2c3p_A* 2c3u_A* 2c3y_A* 2c3m_A* 2pda_A* 2uza_A*
Probab=60.43 E-value=2.2 Score=46.37 Aligned_cols=18 Identities=22% Similarity=0.617 Sum_probs=16.1
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||.|+.+||.++
T Consensus 685 ~~kCi~Cg~Cv~vCP~~A 702 (1231)
T 2c42_A 685 PENCIQCNQCAFVCPHSA 702 (1231)
T ss_dssp TTTCCCCCHHHHHCSSCC
T ss_pred CccCCchhhHHHhCCccc
Confidence 458999999999999985
No 132
>3mm5_B Sulfite reductase, dissimilatory-type subunit BET; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3c7b_B* 3mm6_B* 3mm7_B* 3mm8_B* 3mm9_B* 3mma_B* 3mmb_B* 3mmc_B*
Probab=59.47 E-value=1.7 Score=40.80 Aligned_cols=22 Identities=27% Similarity=0.644 Sum_probs=18.0
Q ss_pred hccccccCcccCcccCCCCCcc
Q 045926 198 KLDGLYECILCACCTTSCPSYW 219 (302)
Q Consensus 198 ~~~~~~~CI~CG~C~~aCP~~~ 219 (302)
...+..+|+.||.|+.+||...
T Consensus 234 ~~id~~~C~~Cg~C~~~CP~~A 255 (366)
T 3mm5_B 234 IKVDVEKCMYCGNCYTMCPGMP 255 (366)
T ss_dssp EEECGGGCCCCCHHHHHCTTCC
T ss_pred EEEehhhCCCcchHHHhCCHhh
Confidence 3446678999999999999853
No 133
>1rrb_A RAF-1 RBD, RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain, transferase, riken structural genomics/proteomics initiative; NMR {Rattus norvegicus} SCOP: d.15.1.5
Probab=57.45 E-value=16 Score=28.29 Aligned_cols=76 Identities=17% Similarity=0.176 Sum_probs=42.4
Q ss_pred EEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEEC-----CE-Eecccc
Q 045926 61 EFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIG-----GT-NTVACL 134 (302)
Q Consensus 61 ~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~Vn-----G~-~~laC~ 134 (302)
+|++|= |.. |.-.|++.+ |+|+-|||.++=. -|.- .+-.|+|..- |. ...+=.
T Consensus 20 ~ir~hL--PNq-------QrT~V~Vrp-G~tlrdaL~KaLk-------~R~L----~pe~C~Vy~~~~~~~~~~~~i~Wd 78 (107)
T 1rrb_A 20 TIRVFL--PNK-------QRTVVNVRN-GMSLHDCLMKALK-------VRGL----QPECCAVFRLLQEHKGKKARLDWN 78 (107)
T ss_dssp EEEEEC--TTT-------CCEEEECCT-TCBHHHHHHHHHH-------HHTC----CTTTEEEEECCCSCSSSCEECCTT
T ss_pred eEEEEC--CCC-------CeEEEEecC-CcCHHHHHHHHHH-------HcCC----CHHHceeEEccccCCCcccccchh
Confidence 466665 443 556789988 9999999987421 1211 1224888843 32 334444
Q ss_pred ccccCCCCCceEEccCCCchhhh
Q 045926 135 KPIDGDTSKPTIITPLPHMFVIK 157 (302)
Q Consensus 135 t~v~~~~~~~~~Iepl~~~~vik 157 (302)
|-+....++.+.|+-+.+||.+.
T Consensus 79 tDi~~L~geEL~Ve~ld~~p~~~ 101 (107)
T 1rrb_A 79 TDAASLIGEELQVDFLKLAAALE 101 (107)
T ss_dssp CBHHHHTTSEEEEEEC-------
T ss_pred hhhhhccCcEEEEEEcccCcchh
Confidence 44444457788999888888764
No 134
>2g1e_A Hypothetical protein TA0895; MOAD, molybdopterin, transferase; NMR {Thermoplasma acidophilum} PDB: 2k22_A
Probab=57.37 E-value=4.6 Score=29.32 Aligned_cols=61 Identities=13% Similarity=0.154 Sum_probs=33.0
Q ss_pred ecCCCchhHHHHHHHcccccCCCcccc--cCCCCCccCccEEEECCEEec---cccccccCCCCCceEEcc
Q 045926 84 DLSECGPMVLDALQKIKAETDSSLSYR--RSCREGICGSCAMNIGGTNTV---ACLKPIDGDTSKPTIITP 149 (302)
Q Consensus 84 ~~~~~g~tvLdal~~i~~~~dptL~~~--~~C~~g~CG~C~V~VnG~~~l---aC~t~v~~~~~~~~~Iep 149 (302)
+++. +.||.+++..+... .|.|.-. ... .|.=..+.|.|||+.+. -=.|.+.+ ++.+.|-|
T Consensus 20 ~~~~-~~tv~~ll~~l~~~-~p~~~~~~l~~~-~g~~~~v~v~vN~~~v~~~~~~~~~l~~--gD~V~i~p 85 (90)
T 2g1e_A 20 TFNG-ISKISELLERLKVE-YGSEFTKQMYDG-NNLFKNVIILVNGNNITSMKGLDTEIKD--DDKIDLFP 85 (90)
T ss_dssp EESS-CCBHHHHHHHHHHH-SCHHHHHHHCCS-SCSTTTCEEEESSSBGGGTCSSSCBCCT--TCEEEEEC
T ss_pred EcCC-CCcHHHHHHHHHHH-Ccchhhhccccc-cCcCcceEEEECCEEccccCCCCcCCCC--CCEEEEeC
Confidence 3344 78999999988643 3543211 000 01223478999998653 13445554 44555443
No 135
>1wxm_A A-RAF proto-oncogene serine/threonine-protein kinase; RAS-binding domain (RBD), ubiquitin-like fold, A-RAF kinase, structural genomics; NMR {Homo sapiens} SCOP: d.15.1.5
Probab=56.00 E-value=48 Score=24.56 Aligned_cols=64 Identities=22% Similarity=0.171 Sum_probs=40.8
Q ss_pred eEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEE--CCE-EeccccccccCCCCCceEEccCCCch
Q 045926 79 QSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNI--GGT-NTVACLKPIDGDTSKPTIITPLPHMF 154 (302)
Q Consensus 79 ~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~V--nG~-~~laC~t~v~~~~~~~~~Iepl~~~~ 154 (302)
|.-.|++.+ |+|+-|||.++=. -|.- .+-.|+|-. +|+ ....=.|-+....++.+.|+-+.+|+
T Consensus 18 QrT~V~Vrp-G~tlrdaL~KaLk-------~R~L----~pe~C~Vy~~~~~~~~~IdWdtDi~~L~~eEL~Ve~ld~~~ 84 (86)
T 1wxm_A 18 QRTVVTVRD-GMSVYDSLDKALK-------VRGL----NQDCCVVYRLIKGRKTVTAWDTAIAPLDGEELIVEVLSGPS 84 (86)
T ss_dssp CEEEEECCS-SCBSHHHHHHHHH-------TTTC----CSSSEEEEEESSSCEEEECSSSBSTTCSSCEEEEEECCSCS
T ss_pred CeEEEEecC-CcCHHHHHHHHHH-------HcCC----CHHHeEEEEcCCCCccccchhHhhhhccCcEEEEEEcccCC
Confidence 667789988 9999999987521 1111 123488874 463 34444555555556788888777765
No 136
>3mm5_A Sulfite reductase, dissimilatory-type subunit ALP; alpha-beta-protein, oxidoreductase; HET: SRM; 1.80A {Archaeoglobus fulgidus} PDB: 3mm6_A* 3mm7_A* 3mm8_A* 3mm9_A* 3mma_A* 3mmb_A* 3mmc_A* 3c7b_A*
Probab=55.87 E-value=2 Score=41.15 Aligned_cols=21 Identities=24% Similarity=0.494 Sum_probs=17.7
Q ss_pred ccccccCcccCcccCCCCCcc
Q 045926 199 LDGLYECILCACCTTSCPSYW 219 (302)
Q Consensus 199 ~~~~~~CI~CG~C~~aCP~~~ 219 (302)
..+..+|+.||.|+.+||...
T Consensus 280 ~id~~~Ci~Cg~Ci~~CP~~~ 300 (418)
T 3mm5_A 280 TIDNRECVRCMHCINKMPKAL 300 (418)
T ss_dssp EECTTTCCCCCHHHHHCTTTE
T ss_pred EEChhhcCccChhHHhCcHhh
Confidence 346678999999999999854
No 137
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=54.06 E-value=2.8 Score=40.47 Aligned_cols=18 Identities=28% Similarity=0.586 Sum_probs=15.5
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||.|..+||+++
T Consensus 300 ~~~C~~Cg~Ci~~CP~al 317 (437)
T 3or1_A 300 NKNCTRCMHCINTMPRAL 317 (437)
T ss_dssp GGGCCCCSHHHHHCTTTE
T ss_pred cccCCchhhhHhhCcHhh
Confidence 358999999999999754
No 138
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=53.55 E-value=2.4 Score=42.13 Aligned_cols=21 Identities=29% Similarity=0.659 Sum_probs=17.6
Q ss_pred cccccCcccCcccCCCCCccc
Q 045926 200 DGLYECILCACCTTSCPSYWW 220 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~~~~ 220 (302)
.+...|+.||.|+.+||+...
T Consensus 185 i~~~~Ci~Cg~Cv~~CP~gAi 205 (574)
T 3c8y_A 185 FDDTNCLLCGQCIIACPVAAL 205 (574)
T ss_dssp GGGSSCCCCCHHHHHCSSTTE
T ss_pred echhhCCcchhHHHhhccCCc
Confidence 356789999999999998653
No 139
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=51.95 E-value=24 Score=23.94 Aligned_cols=47 Identities=15% Similarity=0.217 Sum_probs=29.5
Q ss_pred EecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEecc---ccccccCCCCCceEEc
Q 045926 83 VDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVA---CLKPIDGDTSKPTIIT 148 (302)
Q Consensus 83 v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~la---C~t~v~~~~~~~~~Ie 148 (302)
+++ + +.||.++|.+++.. + ...+|.|||..+-. -.|.+.+ ++.+.|-
T Consensus 9 ~~~-~-~~tv~~ll~~l~~~--~-------------~~v~vavN~~~v~~~~~~~~~L~d--gD~v~i~ 58 (64)
T 2cu3_A 9 RPL-E-GKTLKEVLEEMGVE--L-------------KGVAVLLNEEAFLGLEVPDRPLRD--GDVVEVV 58 (64)
T ss_dssp ECC-T-TCCHHHHHHHHTBC--G-------------GGEEEEETTEEEEGGGCCCCCCCT--TCEEEEE
T ss_pred EEc-C-CCcHHHHHHHcCCC--C-------------CcEEEEECCEECCccccCCcCCCC--CCEEEEE
Confidence 345 5 79999999988631 1 13689999986532 2355655 4455443
No 140
>3kvp_A Uncharacterized protein YMZC; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.40A {Bacillus subtilis}
Probab=50.75 E-value=6.3 Score=28.06 Aligned_cols=12 Identities=33% Similarity=0.692 Sum_probs=10.4
Q ss_pred EEEEEecCCCCC
Q 045926 61 EFRIYRWNPDRP 72 (302)
Q Consensus 61 ~~~I~r~~p~~~ 72 (302)
+|+||||||++.
T Consensus 39 ~iKIykyde~tN 50 (72)
T 3kvp_A 39 YIKIYEYNESRN 50 (72)
T ss_dssp EEEEEEEETTTT
T ss_pred EEEEEEeCCCCC
Confidence 499999999983
No 141
>1rws_A Hypothetical protein PF1061; residual dipolar couplings, structural genomics, unknown FUN; NMR {Pyrococcus furiosus} SCOP: d.15.3.2 PDB: 1sf0_A
Probab=46.94 E-value=16 Score=25.98 Aligned_cols=40 Identities=18% Similarity=0.273 Sum_probs=26.9
Q ss_pred EecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccccC
Q 045926 83 VDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDG 139 (302)
Q Consensus 83 v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v~~ 139 (302)
+++++ +.||.|+|..++. + . ..++|.|||+.+-. .+.+.+
T Consensus 25 ~~~~~-~~Tv~dLl~~L~~---~-----~-------~~v~VavNg~~v~~-~~~L~d 64 (77)
T 1rws_A 25 IEWRE-GMKVRDILRAVGF---N-----T-------ESAIAKVNGKVVLE-DDEVKD 64 (77)
T ss_dssp CCCCS-SCCHHHHHHTTTC---S-----S-------CSSCEEETTEEECS-SSCCCS
T ss_pred EECCC-CCcHHHHHHHhCC---C-----C-------cCEEEEECCEECCC-CCCcCC
Confidence 45555 7999999998862 1 0 12589999986642 266665
No 142
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=46.73 E-value=3.6 Score=40.66 Aligned_cols=20 Identities=25% Similarity=0.504 Sum_probs=16.9
Q ss_pred cccccCcccCcccCCCCCcc
Q 045926 200 DGLYECILCACCTTSCPSYW 219 (302)
Q Consensus 200 ~~~~~CI~CG~C~~aCP~~~ 219 (302)
.+...||.||.|..+||...
T Consensus 548 i~~~~Ci~C~~C~~~cp~~~ 567 (584)
T 2gmh_A 548 INAQNCVHCKTCDIKDPSQN 567 (584)
T ss_dssp ECGGGCCCCCHHHHHCTTCC
T ss_pred EeCCCCcCCCCchhhCCCCC
Confidence 35668999999999999764
No 143
>3or1_A Sulfite reductase alpha; dissimilatory sulfite reductase, sulfate reduction, oxidored sulfite reduction; HET: SRM; 1.76A {Desulfovibrio gigas} PDB: 3or2_A* 2v4j_A* 2xsj_A*
Probab=46.32 E-value=3.7 Score=39.58 Aligned_cols=23 Identities=17% Similarity=0.330 Sum_probs=18.3
Q ss_pred hhccccccCcccCcccCCCCCcc
Q 045926 197 KKLDGLYECILCACCTTSCPSYW 219 (302)
Q Consensus 197 ~~~~~~~~CI~CG~C~~aCP~~~ 219 (302)
+...+..+|+.||.|..+||...
T Consensus 295 ~l~Id~~~C~~Cg~Ci~~CP~al 317 (437)
T 3or1_A 295 TLSIDNKNCTRCMHCINTMPRAL 317 (437)
T ss_dssp EEEECGGGCCCCSHHHHHCTTTE
T ss_pred EEEEccccCCchhhhHhhCcHhh
Confidence 34446679999999999999754
No 144
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=46.17 E-value=5 Score=40.20 Aligned_cols=18 Identities=22% Similarity=0.460 Sum_probs=16.0
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||-|+..||.++
T Consensus 52 ~~~c~~~~~~~~~cp~~~ 69 (608)
T 3j16_B 52 EILCIGCGICVKKCPFDA 69 (608)
T ss_dssp TTTCCCCCHHHHHCSSCC
T ss_pred hhhccccccccccCCccc
Confidence 458999999999999875
No 145
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=45.66 E-value=4.9 Score=38.43 Aligned_cols=22 Identities=23% Similarity=0.608 Sum_probs=17.8
Q ss_pred hccccccCcccCc--ccCCCCCcc
Q 045926 198 KLDGLYECILCAC--CTTSCPSYW 219 (302)
Q Consensus 198 ~~~~~~~CI~CG~--C~~aCP~~~ 219 (302)
...+..+|+.||. |..+||...
T Consensus 15 ~~~~a~rc~~c~~~~C~~~CP~~~ 38 (456)
T 2vdc_G 15 ANEQANRCSQCGVPFCQVHCPVSN 38 (456)
T ss_dssp HHHHHHHSCCCSSCHHHHTSTTCC
T ss_pred HHHHHHhhhcCCCchhhcCCCCCC
Confidence 3455678999986 999999865
No 146
>1fm0_D Molybdopterin convertin factor, subunit 1; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.15.3.1 PDB: 1fma_D 1jw9_D 1jwa_D* 1jwb_D* 3bii_D 1nvi_D
Probab=45.37 E-value=27 Score=24.50 Aligned_cols=59 Identities=15% Similarity=0.186 Sum_probs=34.3
Q ss_pred EEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccccCCCCCceEEcc
Q 045926 80 SYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDGDTSKPTIITP 149 (302)
Q Consensus 80 ~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v~~~~~~~~~Iep 149 (302)
+.+++ .+ +.||-+++..++.. .|.|.-.- .. +.+.|.|||+.+- =.+.+.+ ++.+.|-|
T Consensus 18 ~~~~~-~~-~~tv~~ll~~L~~~-~p~~~~~l--~~---~~~~v~vN~~~v~-~~~~l~~--gD~V~i~P 76 (81)
T 1fm0_D 18 ATEVA-AD-FPTVEALRQHMAAQ-SDRWALAL--ED---GKLLAAVNQTLVS-FDHPLTD--GDEVAFFP 76 (81)
T ss_dssp EEEEC-SC-CSBHHHHHHHHHTT-CHHHHHHH--CC---TTCEEEETTEECC-TTCBCCT--TCEEEEEC
T ss_pred eEEEc-CC-CCCHHHHHHHHHHH-ChhHHHHh--cC---CCEEEEECCEECC-CCCCCCC--CCEEEEeC
Confidence 35566 45 78999999988643 34433111 11 2368999998663 2445554 44555443
No 147
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=44.32 E-value=8.2 Score=40.89 Aligned_cols=29 Identities=28% Similarity=0.587 Sum_probs=25.2
Q ss_pred cccCcccc--cccccCCCCCCHHHHHHHHHH
Q 045926 260 LYRCRAIK--NCTATCPKGLDPADAIHKMKT 288 (302)
Q Consensus 260 ~~~C~~Cg--~C~~vCP~gI~~~~~I~~lR~ 288 (302)
..+|..|+ -|...||.++++.+.|..+++
T Consensus 76 a~rc~~c~~~~C~~~CP~~~~ip~~~~~~~~ 106 (1025)
T 1gte_A 76 AMRCLKCADAPCQKSCPTHLDIKSFITSISN 106 (1025)
T ss_dssp HHHSCCCTTCHHHHTSTTCCCHHHHHHHHHT
T ss_pred HHHhcCCCCCccccCCCCCCCHHHHHHHHHC
Confidence 35799999 699999999999999987764
No 148
>1wgk_A Riken cDNA 2900073H19 protein; THis domain, ubiqutin-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.15.3.3 PDB: 1xo3_A
Probab=43.10 E-value=56 Score=25.17 Aligned_cols=82 Identities=7% Similarity=-0.049 Sum_probs=43.8
Q ss_pred eEEEEEEecCCCCCCCCCce---eEEEEecCC--CchhHHHHHHHcccccCCCccccc-CCCCCccCccEEEECCEEec-
Q 045926 59 MKEFRIYRWNPDRPDSKPFL---QSYHVDLSE--CGPMVLDALQKIKAETDSSLSYRR-SCREGICGSCAMNIGGTNTV- 131 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~---~~y~v~~~~--~g~tvLdal~~i~~~~dptL~~~~-~C~~g~CG~C~V~VnG~~~l- 131 (302)
.++|+++. .-..++ ++++|+++. .+.||-++|..+...+ |.+.-+- ......=....|.|||+.+.
T Consensus 13 ~v~V~~~~------~Lr~~~g~~~~~~vel~~~~~~~TV~~Ll~~L~~~~-~~~~~~lf~~~g~lr~~i~VlVN~~di~~ 85 (114)
T 1wgk_A 13 CVKVEFGG------GAELLFDGVKKHQVALPGQEEPWDIRNLLVWIKKNL-LKERPELFIQGDSVRPGILVLINDADWEL 85 (114)
T ss_dssp EEEEEECT------TTGGGTTTCSEEEEEECCCSSCCBHHHHHHHHTTTT-CCSCHHHHCCSSSCCSSEEEEESSSBHHH
T ss_pred EEEEEEch------HHHHHhCCceEEEEEeCCCCCCCCHHHHHHHHHHHc-cchhHhhCccCCcccCCeEEEECCeeeec
Confidence 37777765 212222 245677652 2369999998886443 3332111 01111233468999998552
Q ss_pred --cccccccCCCCCceEEcc
Q 045926 132 --ACLKPIDGDTSKPTIITP 149 (302)
Q Consensus 132 --aC~t~v~~~~~~~~~Iep 149 (302)
.=.|++.+ ++.+.|-|
T Consensus 86 l~gldt~L~d--GDeV~iip 103 (114)
T 1wgk_A 86 LGELDYQLQD--QDSILFIS 103 (114)
T ss_dssp HCTTTCBCCS--SEEEEEEE
T ss_pred cCCcCcCCCC--CCEEEEeC
Confidence 34566766 44455543
No 149
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=38.82 E-value=93 Score=21.34 Aligned_cols=60 Identities=8% Similarity=0.067 Sum_probs=35.5
Q ss_pred EEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccccC
Q 045926 60 KEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDG 139 (302)
Q Consensus 60 ~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v~~ 139 (302)
++|+|+. ++- +-++++++ +.|+.+.|.+++.. + ...+|.+||..+-.= +.+.+
T Consensus 5 m~i~vNg--------~~~--~~~~~~~~-~~tv~~Ll~~l~~~--~-------------~~v~vavN~~~v~~~-~~L~~ 57 (70)
T 1ryj_A 5 MKFTVIT--------DDG--KKILESGA-PRRIKDVLGELEIP--I-------------ETVVVKKNGQIVIDE-EEIFD 57 (70)
T ss_dssp EEEEEEE--------TTE--EEEEEESS-CCBHHHHHHHTTCC--T-------------TTEEEEETTEECCTT-SBCCT
T ss_pred EEEEEeC--------ccC--ceeEECCC-CCcHHHHHHHhCCC--C-------------CCEEEEECCEECCCc-ccCCC
Confidence 4788888 221 12344455 79999999988621 1 125899999865422 24544
Q ss_pred CCCCceEEc
Q 045926 140 DTSKPTIIT 148 (302)
Q Consensus 140 ~~~~~~~Ie 148 (302)
++.+.|-
T Consensus 58 --gD~V~ii 64 (70)
T 1ryj_A 58 --GDIIEVI 64 (70)
T ss_dssp --TCEEEEE
T ss_pred --CCEEEEE
Confidence 4444443
No 150
>2pmv_A Gastric intrinsic factor; cobalamin transport protein alpha6-alpha6 motif two domain P transport protein; HET: NAG B12; 2.60A {Homo sapiens} PDB: 3kq4_A*
Probab=38.28 E-value=30 Score=32.83 Aligned_cols=29 Identities=14% Similarity=0.401 Sum_probs=24.1
Q ss_pred EEEecCCCchhHHHHHHHcccccCCCccccc
Q 045926 81 YHVDLSECGPMVLDALQKIKAETDSSLSYRR 111 (302)
Q Consensus 81 y~v~~~~~g~tvLdal~~i~~~~dptL~~~~ 111 (302)
|.|.+++ |.++|++|+.+. ..+|.|.|..
T Consensus 315 ~~Vtv~~-gssll~vLk~a~-e~n~~F~F~~ 343 (399)
T 2pmv_A 315 INVSVKS-GSVLLVVLEEAQ-RKNPMFKFET 343 (399)
T ss_dssp EEEESSS-CSCHHHHHHHHH-HSCCSCCEEE
T ss_pred eEEEecC-CCCHHHHHHHHH-HhCcCCceEE
Confidence 6899988 999999999986 4578888763
No 151
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=35.13 E-value=6.9 Score=40.23 Aligned_cols=18 Identities=17% Similarity=0.100 Sum_probs=15.7
Q ss_pred ccCcccCcccCCCCCccc
Q 045926 203 YECILCACCTTSCPSYWW 220 (302)
Q Consensus 203 ~~CI~CG~C~~aCP~~~~ 220 (302)
..|+.||.|+.+||+...
T Consensus 218 ~~C~~CG~Cv~vCP~gAl 235 (783)
T 3i9v_3 218 LPSGFSGNITDICPVGAL 235 (783)
T ss_dssp CCSTTTTTHHHHCSSSSE
T ss_pred CCCccchhHHhhcccCce
Confidence 379999999999998764
No 152
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=34.89 E-value=7.7 Score=34.52 Aligned_cols=33 Identities=3% Similarity=-0.071 Sum_probs=20.6
Q ss_pred CceeEEEEecCCCchhHHHHHHHcccccCCCcccc
Q 045926 76 PFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYR 110 (302)
Q Consensus 76 ~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~ 110 (302)
+.|-+|.++ ..|.||-.|||++=.-..|+++..
T Consensus 10 ~~~~~f~l~--g~~~t~~NalRRills~vp~~AI~ 42 (265)
T 2pa8_D 10 DTRIDLVFE--GYPLEFVNAIRRASMLYVPIMAVD 42 (265)
T ss_dssp SSEEEEEEE--SSCHHHHHHHHHHHHHSCCEEEEE
T ss_pred CCEEEEEEe--CCCHHHHHHHHHHHHHcCccceEE
Confidence 345567666 347888888887543446665543
No 153
>2l52_A Methanosarcina acetivorans SAMP1 homolog; beta-grAsp fold, protein binding, E1-like, SAMP activator, ELSA, adenylation, ubiquitin; NMR {Methanosarcina acetivorans}
Probab=34.02 E-value=61 Score=23.96 Aligned_cols=58 Identities=26% Similarity=0.403 Sum_probs=34.0
Q ss_pred chhHHHHHHHcccccCCCcccc--cCC--CCC---ccCccEEEECCEEec---cccccccCCCCCceEEcc
Q 045926 89 GPMVLDALQKIKAETDSSLSYR--RSC--REG---ICGSCAMNIGGTNTV---ACLKPIDGDTSKPTIITP 149 (302)
Q Consensus 89 g~tvLdal~~i~~~~dptL~~~--~~C--~~g---~CG~C~V~VnG~~~l---aC~t~v~~~~~~~~~Iep 149 (302)
+.||-|++..+... .|.|.-. ..+ +.. .||+=.|.|||+.+. .-.|.+.+ ++.+.|-|
T Consensus 27 ~~tv~~ll~~L~~~-~p~l~~~l~~~g~l~~~v~~~~~~~~v~VNg~~v~~~~~~~~~L~~--gD~V~i~p 94 (99)
T 2l52_A 27 GEKVIDVLLSLTDK-YPALKYVIFEKGDEKSEILILCGSINILINGNNIRHLEGLETLLKD--SDEIGILP 94 (99)
T ss_dssp CSSHHHHHHHHHHH-CGGGTTTSBCSCCTTSSCCCBCSSCEEEETTSCGGGTTSTTSCCCT--TEEEEEEC
T ss_pred CCcHHHHHHHHHHH-ChhHHHHHhcccccccceeccccccEEEECCEEccccCCCCCCCCC--CCEEEEEC
Confidence 47899999887643 3433221 111 223 388889999998653 34555555 44454443
No 154
>3j16_B RLI1P; ribosome recycling, translation, eukarya, ribosome; HET: ATP; 7.20A {Saccharomyces cerevisiae}
Probab=33.27 E-value=7.2 Score=39.04 Aligned_cols=19 Identities=32% Similarity=0.662 Sum_probs=15.7
Q ss_pred ccccCcccCcccCCCCCcc
Q 045926 201 GLYECILCACCTTSCPSYW 219 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~~~ 219 (302)
.-..||.||.|+.-||.-.
T Consensus 51 ~~~~c~~~~~~~~~cp~~~ 69 (608)
T 3j16_B 51 SEILCIGCGICVKKCPFDA 69 (608)
T ss_dssp CTTTCCCCCHHHHHCSSCC
T ss_pred ehhhccccccccccCCccc
Confidence 3457999999999999753
No 155
>2qjl_A URM1, ubiquitin-related modifier 1; ubiquitin-like protein, signaling protein; 1.44A {Saccharomyces cerevisiae} PDB: 2pko_A 2ax5_A
Probab=30.55 E-value=1.3e+02 Score=22.04 Aligned_cols=82 Identities=9% Similarity=-0.079 Sum_probs=42.6
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecC--CCchhHHHHHHHcccccCCCcc-----cccCCCCCccCccEEEECCEEec
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLS--ECGPMVLDALQKIKAETDSSLS-----YRRSCREGICGSCAMNIGGTNTV 131 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~--~~g~tvLdal~~i~~~~dptL~-----~~~~C~~g~CG~C~V~VnG~~~l 131 (302)
+++|++|-.=. +..+-..+.++++. + |.||-+++..+... .|.+. |..+- ..=..+.|-|||+.+.
T Consensus 3 ~i~V~~fa~lr---e~~~g~~~~~~~l~~~~-~~Tv~~L~~~L~~~-~~~~~~~l~~~~~~~--~lr~~~~v~VN~~~~~ 75 (99)
T 2qjl_A 3 NVKVEFLGGLD---AIFGKQRVHKIKMDKED-PVTVGDLIDHIVST-MINNPNDVSIFIEDD--SIRPGIITLINDTDWE 75 (99)
T ss_dssp EEEEEEETTGG---GGTTTCCEEEEEECSCS-CCBHHHHHHHHHHH-TCSSGGGHHHHEETT--EECTTEEEEETTEEGG
T ss_pred EEEEEEchHHH---HHhCCCcEEEEecCCCC-CCcHHHHHHHHHHH-CchhhHHHhhhccCC--ccccCeEEEECCEEcc
Confidence 46777775211 11111244566665 5 78999988887643 33321 11100 0111378999998753
Q ss_pred ---cccccccCCCCCceEEcc
Q 045926 132 ---ACLKPIDGDTSKPTIITP 149 (302)
Q Consensus 132 ---aC~t~v~~~~~~~~~Iep 149 (302)
.=.|.+.+ ++.+.+-|
T Consensus 76 ~~~~~d~~L~d--gDeVa~~P 94 (99)
T 2qjl_A 76 LEGEKDYILED--GDIISFTS 94 (99)
T ss_dssp GGTGGGCBCCT--TCEEEEEE
T ss_pred ccCCCCcCcCC--CCEEEEEC
Confidence 23456665 44555433
No 156
>2pa8_D DNA-directed RNA polymerase subunit D; ferredoxin-like Fe-S binding motif, platform for RNA polymer assembly, transferase; 1.76A {Sulfolobus solfataricus} PDB: 2pmz_D 3hkz_D 2waq_D 2wb1_D 2y0s_D
Probab=27.74 E-value=9 Score=34.07 Aligned_cols=17 Identities=29% Similarity=0.790 Sum_probs=14.9
Q ss_pred ccccCcccCcccCCCCC
Q 045926 201 GLYECILCACCTTSCPS 217 (302)
Q Consensus 201 ~~~~CI~CG~C~~aCP~ 217 (302)
+..+|+.||.|..+||.
T Consensus 199 d~~~C~~C~~C~~vCp~ 215 (265)
T 2pa8_D 199 NELSCTLCEECLRYCNG 215 (265)
T ss_dssp CGGGCCCCCHHHHHHTT
T ss_pred ccccCCCchHHHHhCCC
Confidence 45789999999999993
No 157
>2bb6_A TCII, TC II, transcobalamin II; alpha_6 - alpha_6 barrel, transport protein; HET: B12; 2.00A {Bos taurus} PDB: 2bbc_A* 2v3n_A* 2v3p_A* 2bb5_A*
Probab=26.85 E-value=73 Score=30.31 Aligned_cols=57 Identities=12% Similarity=0.219 Sum_probs=35.4
Q ss_pred eEEEEEEecCCCCCCCCCceeEEEEecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCE
Q 045926 59 MKEFRIYRWNPDRPDSKPFLQSYHVDLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGT 128 (302)
Q Consensus 59 ~~~~~I~r~~p~~~~~~~~~~~y~v~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~ 128 (302)
.|+++|+ + .. .+ .++.|.+++ |.+++++|+.+.. . |.|.|... .-.=|-=.--|||.
T Consensus 318 ~VtytV~--~-~~---~~--~~~~Vtv~~-gssll~vLk~A~e-~-~~F~F~~~--es~~G~fItSInG~ 374 (414)
T 2bb6_A 318 DVLLKVS--G-IS---PS--YRHSVSVPA-GSSLEDILKNAQE-H-GRFRFRTQ--ASLSGPFLTSVLGR 374 (414)
T ss_dssp EEEEEEE--S-SS---SC--EEEEEEEET-TCCHHHHHHHHHH-S-SSCCEEEE--CCTTSCEEEEETTE
T ss_pred EEEEEEe--e-CC---Cc--cceEEEecC-CCCHHHHHHHHHh-c-cCCceEee--ecCCCceEEEECCC
Confidence 5677777 2 11 22 456788888 9999999999864 3 77777642 11122234556775
No 158
>3dwg_C 9.5 kDa culture filtrate antigen CFP10A; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} PDB: 3dwm_A
Probab=24.44 E-value=1.1e+02 Score=21.98 Aligned_cols=58 Identities=14% Similarity=0.145 Sum_probs=33.1
Q ss_pred chhHHHHHHHcccccCCCccccc-CC--CCCccCccEEEECCEEecc---ccccccCCCCCceEEcc
Q 045926 89 GPMVLDALQKIKAETDSSLSYRR-SC--REGICGSCAMNIGGTNTVA---CLKPIDGDTSKPTIITP 149 (302)
Q Consensus 89 g~tvLdal~~i~~~~dptL~~~~-~C--~~g~CG~C~V~VnG~~~la---C~t~v~~~~~~~~~Iep 149 (302)
+.||-+++..+... .|.|.-.- .. ....=..+.|.|||+.+.. =.|.+.+ ++.+.|-|
T Consensus 25 ~~Tv~~ll~~L~~~-~p~l~~~l~~~~~~g~~~~~~~v~VN~~~v~~~~~~~~~L~~--gDeV~i~P 88 (93)
T 3dwg_C 25 GDTLGAVISDLEAN-YSGISERLMDPSSPGKLHRFVNIYVNDEDVRFSGGLATAIAD--GDSVTILP 88 (93)
T ss_dssp CSBHHHHHHHHHHH-STTHHHHHBCSSSTTSBCTTEEEEETTEEGGGTTGGGCBCCT--TCEEEEEE
T ss_pred CCCHHHHHHHHHHH-ChhHHHHHhccccCCcccCCEEEEECCEEccCcCCCCcCCCC--CCEEEEEC
Confidence 78999999988644 36554221 00 0001113899999987642 3466655 44555443
No 159
>2kmm_A Guanosine-3',5'-BIS(diphosphate) 3'- pyrophosphohydrolase; methods development, TGS domain, predominantly beta-sheet structure; NMR {Porphyromonas gingivalis}
Probab=24.42 E-value=50 Score=22.43 Aligned_cols=41 Identities=12% Similarity=0.168 Sum_probs=25.0
Q ss_pred ecCCCchhHHHHHHHcccccCCCcccccCCCCCccCccEEEECCEEeccccccccC
Q 045926 84 DLSECGPMVLDALQKIKAETDSSLSYRRSCREGICGSCAMNIGGTNTVACLKPIDG 139 (302)
Q Consensus 84 ~~~~~g~tvLdal~~i~~~~dptL~~~~~C~~g~CG~C~V~VnG~~~laC~t~v~~ 139 (302)
++++ |.|++|++..++.. +... .-+++|||+.+-- .+.+.+
T Consensus 14 ~~~~-g~T~~dla~~i~~~----l~~~---------~vaa~vNg~lvdl-~~~L~~ 54 (73)
T 2kmm_A 14 RLPQ-GATALDFAYSLHSD----LGDH---------CIGAKVNHKLVPL-SYVLNS 54 (73)
T ss_dssp EECT-TCBHHHHHHHHCSH----HHHT---------EEEEEETTEECCT-TCBCCS
T ss_pred EcCC-CCcHHHHHHHHhhc----cccc---------eEEEEECCEEeCC-CcCcCC
Confidence 3445 89999999887521 1111 2577999985421 355554
No 160
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=23.87 E-value=19 Score=35.82 Aligned_cols=18 Identities=22% Similarity=0.508 Sum_probs=15.8
Q ss_pred cccCcccccccccCCCCC
Q 045926 260 LYRCRAIKNCTATCPKGL 277 (302)
Q Consensus 260 ~~~C~~Cg~C~~vCP~gI 277 (302)
...|+.||-|+..||..+
T Consensus 66 e~~c~gc~~~~~~~p~~~ 83 (607)
T 3bk7_A 66 EASCTGCGICVHKCPFNA 83 (607)
T ss_dssp TTTCCCCCHHHHHCSSCC
T ss_pred ecccCccccccCCCCcce
Confidence 458999999999999874
No 161
>3bk7_A ABC transporter ATP-binding protein; ABC ATPase, iron-sulfur cluster, adenosine diphosphate, nucleotide-binding; HET: ADP; 2.80A {Pyrococcus abyssi} PDB: 3j15_B*
Probab=20.52 E-value=17 Score=36.25 Aligned_cols=16 Identities=31% Similarity=0.837 Sum_probs=13.9
Q ss_pred cccCcccCcccCCCCC
Q 045926 202 LYECILCACCTTSCPS 217 (302)
Q Consensus 202 ~~~CI~CG~C~~aCP~ 217 (302)
-.-||.||.|+..||.
T Consensus 66 e~~c~gc~~~~~~~p~ 81 (607)
T 3bk7_A 66 EASCTGCGICVHKCPF 81 (607)
T ss_dssp TTTCCCCCHHHHHCSS
T ss_pred ecccCccccccCCCCc
Confidence 4579999999999995
Done!