BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045936
(145 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225430668|ref|XP_002268738.1| PREDICTED: two-component response regulator ARR22 [Vitis vinifera]
Length = 130
Score = 147 bits (370), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 64/117 (54%), Positives = 90/117 (76%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
L+VDDDP+ RRIH ++L VG + + ENGKEAVDL+R+GA F ++ +D+EMP+MDG +
Sbjct: 13 TLIVDDDPLTRRIHKVLLTKVGLETQAVENGKEAVDLYRSGASFDLILMDLEMPIMDGPK 72
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
ATK +RAM V+S IVGVT+R+ E E+++FM +GLD CY KPLT + L+E+L K+
Sbjct: 73 ATKELRAMGVQSMIVGVTARDLEVEKQMFMASGLDDCYVKPLTTDTVTALVEKLNKD 129
>gi|225430664|ref|XP_002268656.1| PREDICTED: two-component response regulator ARR22 [Vitis vinifera]
gi|147770071|emb|CAN76616.1| hypothetical protein VITISV_013274 [Vitis vinifera]
Length = 131
Score = 142 bits (358), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 63/116 (54%), Positives = 90/116 (77%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALV DDD +I++IH +L +G +V V NGKE +DL+R+G F ++F+DMEMP+MDG E
Sbjct: 14 ALVADDDTIIQKIHKALLTKLGLEVNVVANGKEVLDLYRSGTSFDLIFMDMEMPIMDGPE 73
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
TK +RAM V+S I+GVTSR+ ++E+E FM +GL+ CY KPLT++KI LL++L+K
Sbjct: 74 VTKELRAMGVQSIIMGVTSRDLDSEKEAFMASGLNDCYMKPLTISKISSLLQDLKK 129
>gi|225430645|ref|XP_002269033.1| PREDICTED: two-component response regulator ARR22 [Vitis vinifera]
gi|296085160|emb|CBI28655.3| unnamed protein product [Vitis vinifera]
Length = 140
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 64/141 (45%), Positives = 96/141 (68%), Gaps = 4/141 (2%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
+ SSSK +I + + L+V+DDP+I++IH +++ G +V+V NGKE VD
Sbjct: 4 GKATSSSKAMKI----IDTEKKISVLIVEDDPLIQKIHKVMMAKFGTEVQVVANGKEVVD 59
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDL 124
L+R+GA F ++ +D EMP+MDG EATK +R+M V S IVGVTSR+ ++E + FM++GL+
Sbjct: 60 LYRSGASFDLILMDFEMPIMDGFEATKELRSMGVTSMIVGVTSRSQDSEIQAFMKSGLNA 119
Query: 125 CYTKPLTMAKIVPLLEELQKN 145
CY KPL K+ +L EL+ N
Sbjct: 120 CYVKPLNAEKVTAVLNELKNN 140
>gi|297833110|ref|XP_002884437.1| hypothetical protein ARALYDRAFT_477689 [Arabidopsis lyrata subsp.
lyrata]
gi|297330277|gb|EFH60696.1| hypothetical protein ARALYDRAFT_477689 [Arabidopsis lyrata subsp.
lyrata]
Length = 137
Score = 123 bits (309), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 61/114 (53%), Positives = 81/114 (71%), Gaps = 1/114 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDDDP+ R+H MI+K++G + A+NG+EAV L R GA F ++ +D EMP DG+
Sbjct: 21 LIVDDDPLNCRLHEMIIKTIGGISQTAKNGEEAVILHRGGASFDLILMDKEMPERDGVST 80
Query: 90 TKAMRAMKVESKIVGVTS-RNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TK +R MKV S IVGVTS + E ER+ FM+AGL+ C KPLT AKI+PL+ L
Sbjct: 81 TKKLREMKVTSMIVGVTSLADQEEERKAFMEAGLNHCLEKPLTKAKILPLINHL 134
>gi|15229263|ref|NP_187078.1| two-component response regulator ARR22 [Arabidopsis thaliana]
gi|30679083|ref|NP_850511.1| two-component response regulator ARR22 [Arabidopsis thaliana]
gi|145331750|ref|NP_001078102.1| two-component response regulator ARR22 [Arabidopsis thaliana]
gi|51316101|sp|Q9M8Y4.1|ARR22_ARATH RecName: Full=Two-component response regulator ARR22
gi|6721158|gb|AAF26786.1|AC016829_10 putative response regulator protein (receiver component)
[Arabidopsis thaliana]
gi|21553766|gb|AAM62859.1| putative response regulator protein (receiver component)
[Arabidopsis thaliana]
gi|332640539|gb|AEE74060.1| two-component response regulator ARR22 [Arabidopsis thaliana]
gi|332640540|gb|AEE74061.1| two-component response regulator ARR22 [Arabidopsis thaliana]
gi|332640541|gb|AEE74062.1| two-component response regulator ARR22 [Arabidopsis thaliana]
Length = 142
Score = 121 bits (303), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 63/122 (51%), Positives = 83/122 (68%), Gaps = 2/122 (1%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEM 81
K + L+VDDDP+ RR+H MI+K++G + A+NG+EAV L R G A F ++ +D EM
Sbjct: 18 KKKLINVLIVDDDPLNRRLHEMIIKTIGGISQTAKNGEEAVILHRDGEASFDLILMDKEM 77
Query: 82 PVMDGIEATKAMRAMKVESKIVGVTS-RNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
P DG+ TK +R MKV S IVGVTS + E ER+ FM+AGL+ C KPLT AKI PL+
Sbjct: 78 PERDGVSTTKKLREMKVTSMIVGVTSVADQEEERKAFMEAGLNHCLEKPLTKAKIFPLIS 137
Query: 141 EL 142
L
Sbjct: 138 HL 139
>gi|224105501|ref|XP_002313833.1| extra response regulator [Populus trichocarpa]
gi|222850241|gb|EEE87788.1| extra response regulator [Populus trichocarpa]
Length = 129
Score = 120 bits (301), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 57/117 (48%), Positives = 85/117 (72%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVVDDD +I+ IHS +L +G + +VA NG+EAVDL +G KF ++ +D +MP+M+GIE
Sbjct: 12 ALVVDDDRIIKTIHSKLLSKLGIENQVAANGEEAVDLHCSGKKFDLIVMDRDMPIMNGIE 71
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
AT+ +RA+ + S IVGV++R+ E E + FM AGLD KPLT +K++ +L ++ N
Sbjct: 72 ATRELRALGIRSIIVGVSTRSLEQEIQEFMDAGLDDYQEKPLTSSKVISILHKINHN 128
>gi|255560269|ref|XP_002521152.1| sensory transduction histidine kinase bacterial, putative [Ricinus
communis]
gi|223539721|gb|EEF41303.1| sensory transduction histidine kinase bacterial, putative [Ricinus
communis]
Length = 148
Score = 119 bits (298), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 59/138 (42%), Positives = 89/138 (64%), Gaps = 4/138 (2%)
Query: 12 KKARISENPVSKNRP----YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
K+ ++ SKN+ ALVVDDD R IH +L+++G + + NGKEA+D+
Sbjct: 7 KRNKMVTTTASKNQKSRTKMTALVVDDDTTNRIIHRRLLQNLGIENQEVRNGKEAIDIHC 66
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYT 127
+G F ++ +DM+MP+M+GIEATK +RAM + S I GV++R E E + FM+AGLD
Sbjct: 67 SGTNFDLILMDMDMPIMNGIEATKQLRAMGIRSTIAGVSTRTMEEEVQEFMEAGLDDYQE 126
Query: 128 KPLTMAKIVPLLEELQKN 145
KPLT AK++ +L ++ N
Sbjct: 127 KPLTSAKLISILHKINHN 144
>gi|356503660|ref|XP_003520624.1| PREDICTED: two-component response regulator ARR22-like [Glycine
max]
Length = 132
Score = 118 bits (295), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 84/115 (73%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVVDD+ + R+IH +L+SVG K + ENG+EAVD+ G +F ++ +DM+MP+M+GIE
Sbjct: 12 ALVVDDNKINRKIHQKLLESVGMKNQGVENGQEAVDIHCHGQRFDLILMDMDMPIMNGIE 71
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
ATK +R+M + S IVGV+SR +E E FM+AGL+ + KPL +K+ LL+++
Sbjct: 72 ATKELRSMGIGSMIVGVSSRCTEAEIRKFMEAGLNDYHEKPLNNSKLSSLLDKIN 126
>gi|356570702|ref|XP_003553524.1| PREDICTED: two-component response regulator ARR22-like [Glycine
max]
Length = 150
Score = 117 bits (294), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 59/135 (43%), Positives = 89/135 (65%), Gaps = 2/135 (1%)
Query: 12 KKARISENP--VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
+K +I E V + R AL+V+DD +IR +H IL SVG K++VAENGKEA+++ +G
Sbjct: 11 QKEKIGEEQLKVMEPRQLTALIVEDDMVIRMVHQKILNSVGLKIQVAENGKEAIEIHGSG 70
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKP 129
F ++ +D +MPVM+GIEATK +R+M + S I GV++R+ FM+AGLD KP
Sbjct: 71 QSFDLILMDRDMPVMNGIEATKTLRSMGINSMITGVSTRSVAAHIREFMEAGLDDYVEKP 130
Query: 130 LTMAKIVPLLEELQK 144
LT+ K+ + ++ K
Sbjct: 131 LTLDKLTSITHKINK 145
>gi|30690228|ref|NP_850864.1| response regulator 24 [Arabidopsis thaliana]
gi|332006174|gb|AED93557.1| response regulator 24 [Arabidopsis thaliana]
Length = 139
Score = 117 bits (293), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 84/115 (73%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVVDD + + IH +L +G K +V NGKEAVD++ +G + ++ +DM+MP+M+GI+
Sbjct: 20 ALVVDDSFVNQTIHQKLLNRLGIKNDVVTNGKEAVDVYCSGGNYDLILMDMDMPIMNGIQ 79
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
ATK +R M +ESKI GVT+R +E E++ FM+AGL+ KPLT++K++ +L +L
Sbjct: 80 ATKRLREMGIESKIAGVTTRANEGEKKEFMEAGLNDFQEKPLTISKLLSILHKLN 134
>gi|356504133|ref|XP_003520853.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR22-like [Glycine max]
Length = 150
Score = 116 bits (291), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/113 (47%), Positives = 82/113 (72%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
AL+VDDD +IR+IH ++L+ + + + ++GKEAVDL R+G F I+F+D EMP+MDG E
Sbjct: 32 ALIVDDDAIIRKIHKIMLERLFTEAKTVKDGKEAVDLCRSGENFDIIFMDKEMPIMDGHE 91
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
ATK + AM V+S IVG+T+R ++E F+ +G + C+ KPL AK+ +L+E
Sbjct: 92 ATKHLSAMGVKSIIVGITTRADGKDKEEFLASGSNHCFEKPLDQAKVEQVLQE 144
>gi|224069957|ref|XP_002303092.1| extra response regulator [Populus trichocarpa]
gi|222844818|gb|EEE82365.1| extra response regulator [Populus trichocarpa]
Length = 138
Score = 115 bits (288), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 54/114 (47%), Positives = 82/114 (71%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVVDDD + + IH +L+ +G + +VA NGKEA+D+ +G KF ++ +D +MP+M+GIE
Sbjct: 17 ALVVDDDSINQTIHHRLLEQLGIENQVARNGKEAIDIHCSGKKFDLILMDRDMPIMNGIE 76
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
AT+ +RAM + S I GV++R + E + FM+AGLD KPLT AKI+ +L ++
Sbjct: 77 ATRKLRAMGIRSMIAGVSTRCVKQEIQEFMEAGLDDYQEKPLTSAKIISILHKI 130
>gi|356570698|ref|XP_003553522.1| PREDICTED: LOW QUALITY PROTEIN: two-component response regulator
ARR22-like [Glycine max]
Length = 133
Score = 114 bits (286), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 83/115 (72%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVVDD+ + R+IH +L+SVG K + ENG+EAVD+ G F ++ +DM+MP+M+GIE
Sbjct: 12 ALVVDDNILNRKIHXKLLESVGVKNQGVENGQEAVDIHCHGQIFDLILMDMDMPIMNGIE 71
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
ATK +R+M + S IVGV+SR +E E FM+AGL+ + KPL AK+ +L+++
Sbjct: 72 ATKELRSMGIGSMIVGVSSRCTEAEIRKFMEAGLNDYHEKPLNNAKLSSILDKIN 126
>gi|297808661|ref|XP_002872214.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297318051|gb|EFH48473.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 139
Score = 114 bits (285), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 53/114 (46%), Positives = 84/114 (73%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVVDD + + IH +L +G + +V NGKEAVD++ +G + ++ +DM+MP+M+GI+
Sbjct: 20 ALVVDDSFVNQTIHQKLLNRLGIENDVVTNGKEAVDVYCSGRNYDLILMDMDMPIMNGIQ 79
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
ATK +R M +ESKI GVT+R +E E++ FM+AGL+ KPLT++K++ +L +L
Sbjct: 80 ATKRLREMGIESKIAGVTTRANEGEKKEFMEAGLNDFQEKPLTISKLLSILHKL 133
>gi|357510255|ref|XP_003625416.1| Chemotaxis protein cheY-like protein [Medicago truncatula]
gi|355500431|gb|AES81634.1| Chemotaxis protein cheY-like protein [Medicago truncatula]
Length = 140
Score = 112 bits (279), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 54/115 (46%), Positives = 81/115 (70%), Gaps = 1/115 (0%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
AL+VDDD ++R IH +LK G K E +NGKEAVD+ G +F I+ +D EMP+M+GIE
Sbjct: 24 ALIVDDDKLVRMIHQGLLKRAGVKSEAVKNGKEAVDIHCNGQRFDIILMDKEMPIMNGIE 83
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
ATK +R+M + S IVGV+S +E E++ FM+AG++ KPLT+ + +L+ ++
Sbjct: 84 ATKKLRSMGIGSMIVGVSS-CTEAEKQEFMEAGINDYQVKPLTIGVLNSILDAVK 137
>gi|357510367|ref|XP_003625472.1| Extra response regulator [Medicago truncatula]
gi|355500487|gb|AES81690.1| Extra response regulator [Medicago truncatula]
Length = 130
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 61/122 (50%), Positives = 81/122 (66%), Gaps = 3/122 (2%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
+N VSK ALVVDD+ + R+IH +L G K + ENGKEAVD+ G KF ++ +
Sbjct: 5 QNFVSK---LTALVVDDNIINRKIHQKMLNKFGVKSQGVENGKEAVDIHWRGQKFDLILM 61
Query: 78 DMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVP 137
DM+MP+M+GIEATK +RAM + S IVGV+SR+ E E FM+AGLD KPL A +
Sbjct: 62 DMDMPIMNGIEATKELRAMGICSTIVGVSSRSMEDEILKFMEAGLDEYQEKPLNNAILSS 121
Query: 138 LL 139
+L
Sbjct: 122 IL 123
>gi|224144648|ref|XP_002325362.1| extra response regulator [Populus trichocarpa]
gi|222862237|gb|EEE99743.1| extra response regulator [Populus trichocarpa]
Length = 138
Score = 111 bits (277), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/107 (49%), Positives = 75/107 (70%)
Query: 39 RRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKV 98
R +H M++ S+G KV+ A+NGKEAVDL GA F ++ +DMEMP+M+G AT+ +RAM V
Sbjct: 32 RMVHRMLVTSLGLKVQEAKNGKEAVDLHINGASFDLILMDMEMPIMNGPTATRELRAMGV 91
Query: 99 ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
+S I+GVTS E+ + FM+AGL+ C KPLT+A+I L + N
Sbjct: 92 KSTIIGVTSCTFESVHKDFMEAGLNHCVAKPLTIAQIASFLLKSNNN 138
>gi|255562035|ref|XP_002522026.1| sensory transduction histidine kinase bacterial, putative [Ricinus
communis]
gi|223538830|gb|EEF40430.1| sensory transduction histidine kinase bacterial, putative [Ricinus
communis]
Length = 171
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 53/133 (39%), Positives = 86/133 (64%), Gaps = 2/133 (1%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGF-KVEVAENGKEAVDLF 66
A +S+ + ++ N+ + AL+VDDD ++RRIH IL G +++ A +G+EAV+L
Sbjct: 2 AMNSESSTANDEKTKGNKIFSALIVDDDRVLRRIHKKILTGQGVVEIQEAGDGQEAVELH 61
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCY 126
R GA F ++ +D+ MP+MDG +ATK +R M + I+GV S E E + FM++G+D C
Sbjct: 62 RAGASFDLILMDLHMPIMDGCQATKELRDMGINCTILGV-STCYEEEHKKFMESGIDDCI 120
Query: 127 TKPLTMAKIVPLL 139
+KPL++ K+ L
Sbjct: 121 SKPLSLNKLASWL 133
>gi|3687688|gb|AAC62225.1| response regulator protein [Brassica napus]
Length = 136
Score = 109 bits (272), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 56/115 (48%), Positives = 79/115 (68%), Gaps = 2/115 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMPVMDGIE 88
L+VDDDP+ IH I+K++G + A NG+EAV + R G + F ++ +D EMP DG+
Sbjct: 19 LIVDDDPLNLIIHEKIIKAIGGISQTANNGEEAVIIHRDGGSSFDLILMDKEMPERDGVS 78
Query: 89 ATKAMRAMKVESKIVGVTS-RNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TK +R M+V+S IVGVTS ++E ER FM+AGL+ C KPLT KI+PL+ +L
Sbjct: 79 TTKKLREMEVKSMIVGVTSLADNEEERRAFMEAGLNHCLAKPLTKDKIIPLINQL 133
>gi|357516815|ref|XP_003628696.1| Two-component response regulator ARR22 [Medicago truncatula]
gi|355522718|gb|AET03172.1| Two-component response regulator ARR22 [Medicago truncatula]
Length = 144
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 62/134 (46%), Positives = 85/134 (63%), Gaps = 7/134 (5%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
A S+N SK ALVVDDD M RRIH M L ++G +NGKEAV++ + G KF
Sbjct: 2 ASPSQNFASK---LTALVVDDDAMTRRIHQMTLSNLGVNNTCVKNGKEAVEIHQYGKKFD 58
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREV---FMQAGLDLCYTKPL 130
++ +D +MP M+G EATK +R M + S IVGV+S + E E+E+ FM+AGLD KPL
Sbjct: 59 LILMDKDMPEMNGTEATKQLRLMGISSTIVGVSSHSME-EKEIVVKFMEAGLDEYLEKPL 117
Query: 131 TMAKIVPLLEELQK 144
AK+ +L ++K
Sbjct: 118 DKAKLNSILHAVEK 131
>gi|255562033|ref|XP_002522025.1| sensory transduction histidine kinase bacterial, putative [Ricinus
communis]
gi|223538829|gb|EEF40429.1| sensory transduction histidine kinase bacterial, putative [Ricinus
communis]
Length = 181
Score = 108 bits (271), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 51/127 (40%), Positives = 81/127 (63%), Gaps = 1/127 (0%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
SS E S ++P L+VDD+ ++R IH +L G +V +A NG+EAV+ R
Sbjct: 9 SSESSTANDEKKNSNSKPLSVLLVDDNIVLRTIHKAMLTRQGMEVHLAVNGQEAVEFHRA 68
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTK 128
GA F ++ +D++MP+MDG +ATK +R M + I+GV + S++ER+ FM++GLD C +
Sbjct: 69 GASFDLILMDLDMPIMDGCQATKELRDMGINCAIIGVAAC-SDSERKTFMESGLDDCISV 127
Query: 129 PLTMAKI 135
P ++ KI
Sbjct: 128 PFSLEKI 134
>gi|356503662|ref|XP_003520625.1| PREDICTED: two-component response regulator ARR22-like [Glycine
max]
Length = 113
Score = 108 bits (269), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 73/104 (70%)
Query: 41 IHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES 100
+H +L SVG K++VAENGKEAV++ R+G F ++ +D +MPVM+GIEATK +R+M + S
Sbjct: 2 VHRKMLNSVGLKIQVAENGKEAVEIHRSGQSFDLILMDRDMPVMNGIEATKTLRSMGINS 61
Query: 101 KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
I GV++R+ FM+AGLD KPLT+ K+ ++ ++ K
Sbjct: 62 TITGVSTRSVTAHIREFMEAGLDDYLEKPLTLVKLTSIIHKMNK 105
>gi|171702851|dbj|BAG16381.1| two-component responsive regulator family protein [Brassica rapa
var. perviridis]
Length = 121
Score = 106 bits (265), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 55/111 (49%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMPVMDGIE 88
L+VDDDP+ IH I+K++G + A NG+EAV + R G + F ++ +D EMP DG+
Sbjct: 11 LIVDDDPLNLIIHEKIIKAIGGISQTANNGEEAVIIHRDGGSSFDLILMDKEMPERDGVS 70
Query: 89 ATKAMRAMKVESKIVGVTS-RNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
TK +R M+V+S IVGVTS ++E ER FM+AGL+ C KPLT KI+PL
Sbjct: 71 TTKKLREMEVKSMIVGVTSLADNEEERRAFMEAGLNHCLAKPLTKDKIIPL 121
>gi|171702839|dbj|BAG16375.1| two-component responsive regulator family protein [Brassica
oleracea var. italica]
Length = 121
Score = 105 bits (261), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 76/111 (68%), Gaps = 2/111 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMPVMDGIE 88
L+VDDDP+ IH I++++G + A NG+EAV + R G + F ++ +D EMP DG+
Sbjct: 11 LIVDDDPLNLIIHEKIIEAIGGISQTANNGEEAVIIHRDGGSSFDLILMDKEMPERDGVS 70
Query: 89 ATKAMRAMKVESKIVGVTS-RNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
TK +R M+V+S IVGVTS ++E ER FM+AGL+ C KPLT KI+PL
Sbjct: 71 TTKKLREMEVKSMIVGVTSLADNEEERRAFMEAGLNHCLAKPLTKDKIIPL 121
>gi|294463101|gb|ADE77088.1| unknown [Picea sitchensis]
Length = 252
Score = 102 bits (253), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 53/129 (41%), Positives = 85/129 (65%), Gaps = 2/129 (1%)
Query: 11 SKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA 70
SK +R+SE+ S + P L+V+D + R I +L+++ E AENGK AVD F+ G
Sbjct: 112 SKNSRMSED--SSSPPRRILLVEDTELNRIILGKVLQTLNLHCEEAENGKVAVDYFKQGR 169
Query: 71 KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+ +V +D EMPVMDG EAT+ +R+M V++ IV +T ++++++F +AG+D TKPL
Sbjct: 170 TYDLVLMDKEMPVMDGHEATRQLRSMGVKTPIVALTGNTLQSDKDLFFEAGVDDFQTKPL 229
Query: 131 TMAKIVPLL 139
+ ++V LL
Sbjct: 230 SKDRLVQLL 238
>gi|302800249|ref|XP_002981882.1| hypothetical protein SELMODRAFT_451436 [Selaginella moellendorffii]
gi|300150324|gb|EFJ16975.1| hypothetical protein SELMODRAFT_451436 [Selaginella moellendorffii]
Length = 526
Score = 100 bits (250), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 79/111 (71%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + RRI +L S + + AE+G +AVD+ R+GA++ ++ ID EMPVMDG EA
Sbjct: 410 LIVEDNQVNRRILKKLLASFNIESDAAEDGLQAVDMCRSGAQYDMILIDKEMPVMDGHEA 469
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
T+ +RAM V++ IVG+T +++R F+ AG++ +TKPL+ +++ LLE
Sbjct: 470 TREIRAMGVKTTIVGLTGNALDSDRNQFLAAGVNDFFTKPLSRHQLLRLLE 520
>gi|302808616|ref|XP_002986002.1| hypothetical protein SELMODRAFT_451432 [Selaginella moellendorffii]
gi|300146150|gb|EFJ12821.1| hypothetical protein SELMODRAFT_451432 [Selaginella moellendorffii]
Length = 526
Score = 100 bits (250), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 79/111 (71%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + RRI +L S + + AE+G +AVD+ R+GA++ ++ ID EMPVMDG EA
Sbjct: 410 LIVEDNQVNRRILKKLLASFNIESDAAEDGLQAVDMCRSGAQYDMILIDKEMPVMDGHEA 469
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
T+ +RAM V++ IVG+T +++R F+ AG++ +TKPL+ +++ LLE
Sbjct: 470 TREIRAMGVKTTIVGLTGNALDSDRNQFLAAGVNDFFTKPLSRHQLLRLLE 520
>gi|225461235|ref|XP_002280692.1| PREDICTED: sensor protein rcsC-like [Vitis vinifera]
Length = 150
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 80/121 (66%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N ALVVD D + + + IL+S G + +V +G++A+DL +GA F+++ I M +P+
Sbjct: 29 NSKLTALVVDSDRICQILEKAILESQGVETQVVGSGRDALDLLASGATFNLIIIAMVLPI 88
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
M+G+E T+ +RAM + SK++GVT+ + E E++ F+ AG+D KPLT K+ +L E++
Sbjct: 89 MNGVETTRRIRAMGICSKMLGVTACSYEREKQAFLDAGVDEFIEKPLTPQKLASILREMR 148
Query: 144 K 144
Sbjct: 149 N 149
>gi|225437883|ref|XP_002267242.1| PREDICTED: two-component response regulator ARR22 [Vitis vinifera]
gi|297744274|emb|CBI37244.3| unnamed protein product [Vitis vinifera]
Length = 145
Score = 99.4 bits (246), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 86/138 (62%), Gaps = 1/138 (0%)
Query: 7 GASSSKKARISEN-PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
G +S+KK+ N + + ALVVD D + + + IL+S G + +V +G++A+DL
Sbjct: 6 GINSNKKSCQQGNGDLISDEKLTALVVDSDIICQVLEKAILESQGIQAQVVGSGRDAIDL 65
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLC 125
+G F ++ I M +P+M+G+E T+ +RAM + SK++GVT+ + E ER F+ AG+D
Sbjct: 66 LASGVNFDLIIIAMVLPIMNGVETTRQIRAMGIRSKMLGVTACSYERERRAFLDAGVDEF 125
Query: 126 YTKPLTMAKIVPLLEELQ 143
KPLT K+ +L E++
Sbjct: 126 IEKPLTPQKLASVLREIR 143
>gi|302143145|emb|CBI20440.3| unnamed protein product [Vitis vinifera]
Length = 167
Score = 98.2 bits (243), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 80/121 (66%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N ALVVD D + + + IL+S G + +V +G++A+DL +GA F+++ I M +P+
Sbjct: 29 NSKLTALVVDSDRICQILEKAILESQGVETQVVGSGRDALDLLASGATFNLIIIAMVLPI 88
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
M+G+E T+ +RAM + SK++GVT+ + E E++ F+ AG+D KPLT K+ +L E++
Sbjct: 89 MNGVETTRRIRAMGICSKMLGVTACSYEREKQAFLDAGVDEFIEKPLTPQKLASILREMR 148
Query: 144 K 144
Sbjct: 149 N 149
>gi|224075611|ref|XP_002304706.1| extra response regulator [Populus trichocarpa]
gi|222842138|gb|EEE79685.1| extra response regulator [Populus trichocarpa]
Length = 248
Score = 97.1 bits (240), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 76/129 (58%), Gaps = 9/129 (6%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEV------AENGKEAVDLFRTGA 70
SE+ + + L+VDDD IR + + G + ++ A+NGKEAV L GA
Sbjct: 109 SEDEEDQGNNFSVLIVDDDRTIRETNRRFMALAGTQKQLRMEFQEAKNGKEAVYLHLAGA 168
Query: 71 KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
F ++ +D +MP+M GI+AT+ +R M V+S+IVGVT SE +R+ F+ AGL+ C KPL
Sbjct: 169 SFDLILMDNQMPIMTGIQATQLLRKMGVKSRIVGVT---SEPDRQAFIDAGLNNCIQKPL 225
Query: 131 TMAKIVPLL 139
KI L
Sbjct: 226 NPGKITEFL 234
>gi|147816069|emb|CAN61539.1| hypothetical protein VITISV_030743 [Vitis vinifera]
Length = 157
Score = 94.7 bits (234), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 75/112 (66%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N ALVVD D + + + IL+S G + +V +G++A+DL +GA F+++ I M +P+
Sbjct: 29 NSKLTALVVDSDRICQILEKAILESQGVETQVVGSGRDALDLLASGATFNLIIIAMVLPI 88
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
M+G+E T+ +RAM + SK++GVT+ + E E++ F+ AG+D KPL +K+
Sbjct: 89 MNGVETTRRIRAMGICSKMLGVTACSYEREKQAFLDAGVDEFIEKPLISSKV 140
>gi|224075609|ref|XP_002304705.1| pseudo response regulator [Populus trichocarpa]
gi|222842137|gb|EEE79684.1| pseudo response regulator [Populus trichocarpa]
Length = 223
Score = 93.6 bits (231), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 83/136 (61%), Gaps = 9/136 (6%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEV------AENGKEAVDL 65
+K +S + + + L+VDDD +R + ++ SV + ++ A+NGKEAV L
Sbjct: 79 QKTLLSGDDQDEGYNFSVLIVDDDLTVRDTNRRLMMSVETQKQLTMEFQEAKNGKEAVYL 138
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLC 125
GA + ++ ++ MP+M GI+AT+ +R M V+S+IVG++ SE++++ F+ AGLD C
Sbjct: 139 HLAGASYDLILMENHMPIMTGIQATQRLRKMGVKSQIVGIS---SESDQQAFIDAGLDNC 195
Query: 126 YTKPLTMAKIVPLLEE 141
KPL +AKI L +
Sbjct: 196 IQKPLDIAKITTFLSD 211
>gi|302824141|ref|XP_002993716.1| hypothetical protein SELMODRAFT_449209 [Selaginella moellendorffii]
gi|300138440|gb|EFJ05208.1| hypothetical protein SELMODRAFT_449209 [Selaginella moellendorffii]
Length = 679
Score = 92.0 bits (227), Expect = 7e-17, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 75/110 (68%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D + R I +L+++ + + AENG+ AVDL R G + +V +D EMPVMDG EA
Sbjct: 551 LLVEDTRINRIILRKVLQNLNLQCDEAENGQIAVDLHRQGKSYDLVLMDKEMPVMDGHEA 610
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+A+R M V++ IV +T ++++E+F +AG++ TKPL+ K++ LL
Sbjct: 611 TRALRMMGVKTPIVALTGNALQSDKELFFEAGVNEFQTKPLSRDKLIQLL 660
>gi|224057730|ref|XP_002299304.1| predicted protein [Populus trichocarpa]
gi|222846562|gb|EEE84109.1| predicted protein [Populus trichocarpa]
Length = 250
Score = 91.7 bits (226), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGF------KVEVAENGKEAVDLFRTGAKFHIVFID 78
+ + LVV+DD +R ++ +L GF KVE+A NGKEAVD+ R G +++ +D
Sbjct: 122 KNFSVLVVEDDSYLRNLYRRLLNVFGFLNDFQMKVEMAANGKEAVDVLRGGVSLNLIIMD 181
Query: 79 MEMPVMDGIEATKAMRAMKVESKIVGVTSRNSET--EREVFMQAGLDLCYTKPLTMAKIV 136
M+ + +E + +RA+ VES I+G TS +E +++ FM+AGL+ + KP+T I
Sbjct: 182 MD-RCTNALEEIRELRALGVESNIIGYTSSTAEAPDQQKTFMEAGLNGWFQKPMTFEIIT 240
Query: 137 PLLEELQKN 145
P L +L N
Sbjct: 241 PFLSDLTNN 249
>gi|302822149|ref|XP_002992734.1| hypothetical protein SELMODRAFT_451426 [Selaginella moellendorffii]
gi|300139475|gb|EFJ06215.1| hypothetical protein SELMODRAFT_451426 [Selaginella moellendorffii]
Length = 440
Score = 91.7 bits (226), Expect = 9e-17, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 75/110 (68%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D + R I +L+++ + + AENG+ AVDL R G + +V +D EMPVMDG EA
Sbjct: 312 LLVEDTRINRIILRKVLQNLNLQCDEAENGQIAVDLHRQGKSYDLVLMDKEMPVMDGHEA 371
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+A+R M V++ IV +T ++++E+F +AG++ TKPL+ K++ LL
Sbjct: 372 TRALRMMGVKTPIVALTGNALQSDKELFFEAGVNEFQTKPLSRDKLIQLL 421
>gi|224057728|ref|XP_002299303.1| predicted protein [Populus trichocarpa]
gi|222846561|gb|EEE84108.1| predicted protein [Populus trichocarpa]
Length = 368
Score = 90.9 bits (224), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 68/95 (71%), Gaps = 3/95 (3%)
Query: 48 SVGFKVEVAENGKEAVDLF-RTGAKFHIVFIDMEMPVM--DGIEATKAMRAMKVESKIVG 104
++G K +VAENG++AVDL R A F+++ +DM+MPV G EAT+++RA+ V+SKIVG
Sbjct: 252 NLGVKFQVAENGQQAVDLHSRDKASFNLILMDMDMPVHVATGPEATRSLRALGVKSKIVG 311
Query: 105 VTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
+S + + + F+ AGL+ C+ KPLT+ KI P L
Sbjct: 312 FSSESESEKIDQFISAGLNGCFKKPLTVEKIAPFL 346
>gi|224053442|ref|XP_002297820.1| extra response regulator [Populus trichocarpa]
gi|222845078|gb|EEE82625.1| extra response regulator [Populus trichocarpa]
Length = 336
Score = 89.4 bits (220), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 54/132 (40%), Positives = 75/132 (56%), Gaps = 9/132 (6%)
Query: 10 SSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFK------VEVAENGKEAV 63
+ +K + E+ +K + LVV D +R +L +G++ V VA+NGKEAV
Sbjct: 197 NDQKTQSVESVDTKGNNFSVLVVHDSRDLRETRQRLLVLLGYQKKLQMDVSVAKNGKEAV 256
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLD 123
L GA F ++ +D MP MDGIEA +R M VES+IVGVT E +R FM +G D
Sbjct: 257 YLHLAGASFDMIIMDDLMPFMDGIEAINLLRRMGVESRIVGVT---GEFKRLAFMDSGAD 313
Query: 124 LCYTKPLTMAKI 135
C KPLT+ K+
Sbjct: 314 SCIIKPLTLEKL 325
>gi|168062454|ref|XP_001783195.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665337|gb|EDQ52026.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 115
Score = 89.0 bits (219), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 71/110 (64%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D + R I +L+++ + AENG+ A+D + G + +V +D EMPVMDG EA
Sbjct: 3 LLVEDTRINRIILRKVLQNLNLLCDEAENGQIAIDFHKQGRTYDLVLMDKEMPVMDGHEA 62
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+ +R M V++ IV +T T+RE+F +AG+D TKPL+ K+V LL
Sbjct: 63 TRQLRNMGVKTPIVALTGNALTTDREMFFEAGVDDFQTKPLSRDKLVQLL 112
>gi|255560271|ref|XP_002521153.1| histidine kinase 1 plant, putative [Ricinus communis]
gi|223539722|gb|EEF41304.1| histidine kinase 1 plant, putative [Ricinus communis]
Length = 166
Score = 87.4 bits (215), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
AL+VD+ R + +L+ G + + E + A+DL +G F ++ ID +PV++GIE
Sbjct: 49 ALLVDNHRCCRLVQMGMLQYYGIETQAVETAQAAIDLLTSGHLFDLIVIDSRLPVLNGIE 108
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ +R M V SKI G+ + E +R+ F+ AG D + KPL ++VP+L ++
Sbjct: 109 TTRHIRTMGVCSKIAGLIGSSRERDRQAFLDAGADAVFEKPLVPERLVPMLMQM 162
>gi|168000645|ref|XP_001753026.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695725|gb|EDQ82067.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 89
Score = 85.1 bits (209), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 59/84 (70%)
Query: 56 AENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETERE 115
AENG+ AVD + G +++V +D EMPVMDG EAT+ +R M V++ IV +T T+RE
Sbjct: 3 AENGQIAVDFHKEGRTYNLVLMDKEMPVMDGHEATRQLRNMGVKTPIVALTGNALTTDRE 62
Query: 116 VFMQAGLDLCYTKPLTMAKIVPLL 139
+F +AG+D +TKPL+ K+V LL
Sbjct: 63 LFFKAGVDDFHTKPLSRDKLVQLL 86
>gi|406697353|gb|EKD00616.1| two-component sensor molecule [Trichosporon asahii var. asahii CBS
8904]
Length = 686
Score = 84.7 bits (208), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 79/142 (55%), Gaps = 3/142 (2%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E S+ + R+ + S R ALVVDDD + RR+ S +L +G V +NGK+AVDL
Sbjct: 534 ETVPSTSRHRMDQRRRSSGRSLSALVVDDDSLTRRLMSRMLSRLGHMVTTVDNGKKAVDL 593
Query: 66 FRTGA---KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
A F IVF+D +MP+M G+EA A+R + ++ +VG T +++ ++ +G
Sbjct: 594 ILENAADNPFDIVFLDNQMPIMTGVEAVAALRQVGNDTYVVGCTGNALREDQDEYLSSGA 653
Query: 123 DLCYTKPLTMAKIVPLLEELQK 144
+ KP+ A I+ L E ++
Sbjct: 654 NAIIAKPVHQAAIIEHLAEAKR 675
>gi|384262212|ref|YP_005417399.1| Sensor protein [Rhodospirillum photometricum DSM 122]
gi|378403313|emb|CCG08429.1| Sensor protein [Rhodospirillum photometricum DSM 122]
Length = 1049
Score = 84.3 bits (207), Expect = 1e-14, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 11/131 (8%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
+P LV +D P R + +L+ +G VE+A NG+EA+DL T F +V +D++MPVM
Sbjct: 771 KPLRILVAEDIPENRILAQAVLERLGHDVELATNGREALDLLHTRGPFDVVLMDIQMPVM 830
Query: 85 DGIEATKAMRAMKV-----------ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
DG++A +A+RA+ E ++ T+ +RE F+ AG+D KPL +
Sbjct: 831 DGLDACRAVRALDPAVVFPDGRPVREVPVIAFTADALPGDRERFLAAGMDETLPKPLNIR 890
Query: 134 KIVPLLEELQK 144
++ LL E+ +
Sbjct: 891 RLRTLLAEVAR 901
>gi|168062416|ref|XP_001783176.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162665318|gb|EDQ52007.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 89
Score = 83.6 bits (205), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/84 (48%), Positives = 58/84 (69%)
Query: 56 AENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETERE 115
AENG+ AVDL + G + +V +D EMPVMDG EAT+ +R M V++ IV +T ++RE
Sbjct: 3 AENGQIAVDLHKQGRTYDLVLMDKEMPVMDGHEATRQLRNMGVKTPIVALTGNALTSDRE 62
Query: 116 VFMQAGLDLCYTKPLTMAKIVPLL 139
+F +AG+D TKPL+ K+V LL
Sbjct: 63 LFFEAGVDDFQTKPLSRDKLVQLL 86
>gi|269839224|ref|YP_003323916.1| PAS/PAC sensor hybrid histidine kinase [Thermobaculum terrenum ATCC
BAA-798]
gi|269790954|gb|ACZ43094.1| PAS/PAC sensor hybrid histidine kinase [Thermobaculum terrenum ATCC
BAA-798]
Length = 1363
Score = 83.2 bits (204), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 76/116 (65%), Gaps = 5/116 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV-DLFRTGAKFHIVFIDMEMPVMDGIE 88
L+ +D+P+ RR+ ++ L+ +G+ V +NG+EAV ++ R G ++ +V +D +MP MDG E
Sbjct: 1235 LLAEDNPVNRRLATLQLEKLGYSVRTVDNGREAVEEMARRGQEYCLVLMDCQMPEMDGYE 1294
Query: 89 ATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
AT+ +R ++ +S I+ +T+ E +RE + AG+D +KPLTM K+ +L+
Sbjct: 1295 ATRQIRRLETKSGRRTPIIALTANALEGDREACLAAGMDDYLSKPLTMGKLKAVLD 1350
Score = 45.4 bits (106), Expect = 0.007, Method: Composition-based stats.
Identities = 28/113 (24%), Positives = 58/113 (51%), Gaps = 1/113 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD R+I L+S + E A +G +A++ + F + +D+ +P DG +
Sbjct: 1091 LVVDDQAAHRQILRSYLESWHMRCEEAADGAQAIEKAQR-EHFDLAILDLLLPDTDGFDL 1149
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
+ +R + K+V +T+ + + + E + AG KP+ ++++ +L +
Sbjct: 1150 AQQLRRLSPSMKLVLLTAHHEQGQGERAVDAGFSAYLLKPIRQSQLMDVLANI 1202
>gi|405117468|gb|AFR92243.1| two-component sensor molecule [Cryptococcus neoformans var. grubii
H99]
Length = 1213
Score = 82.8 bits (203), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 81/148 (54%), Gaps = 13/148 (8%)
Query: 4 GAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
G G +K+ +E P+S +LVVDDD + R + S +L +G V AENGK A
Sbjct: 1040 GKSGQPETKEDPPAEMPLS------SLVVDDDKLTRMLMSRMLTRLGHYVTTAENGKIAA 1093
Query: 64 ----DLF--RTGA-KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREV 116
D+F + GA KF IVF+D +MP+M G+E +A+R M IVG T +++
Sbjct: 1094 EMIKDMFENKEGAVKFDIVFLDNQMPLMSGVEVARAVREMNCPIYIVGCTGNALREDQDE 1153
Query: 117 FMQAGLDLCYTKPLTMAKIVPLLEELQK 144
+M AG D TKP+ ++ ++ + ++
Sbjct: 1154 YMAAGADTILTKPIHQKHLIEMIRDARR 1181
>gi|356570684|ref|XP_003553515.1| PREDICTED: two-component response regulator ARR22-like [Glycine
max]
Length = 103
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 70/102 (68%), Gaps = 3/102 (2%)
Query: 45 ILKSVGFK-VEVAENGKEAVDLFR-TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKI 102
+ + VG K V A+NGKEAVDL R G F ++ +D +MP+M+GI+ATK +R+ + SKI
Sbjct: 1 MFERVGIKDVTAAKNGKEAVDLHRINGQSFDLILMDKDMPIMNGIQATKELRSTGISSKI 60
Query: 103 VGVTSRN-SETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
+GV+S + E+ + F++AGLD Y KPLT + +L++++
Sbjct: 61 IGVSSSSREESNVQEFVEAGLDDYYMKPLTEEMLREILDKIK 102
>gi|374289163|ref|YP_005036248.1| putative histidine kinase/response regulator fusion protein
[Bacteriovorax marinus SJ]
gi|301167704|emb|CBW27287.1| putative histidine kinase/response regulator fusion protein
[Bacteriovorax marinus SJ]
Length = 628
Score = 82.4 bits (202), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 83/132 (62%), Gaps = 1/132 (0%)
Query: 11 SKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA 70
S++ ++ + K P+ ++V+D+ + +++ MIL +G+KV++ ENGK AV+ +
Sbjct: 496 SEEQDVNYDGFEKKYPHKIILVEDNRVNQKLGEMILAKLGYKVDIVENGKVAVEAC-SNE 554
Query: 71 KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+ ++F+DM+MPVMDG+ ATK + ESKIV +T+ E +R+ + AG+ +KP+
Sbjct: 555 NYSLIFMDMQMPVMDGVTATKKILKNNKESKIVAMTANVLEEDRQKCLDAGMLDFVSKPV 614
Query: 131 TMAKIVPLLEEL 142
+A + +++ L
Sbjct: 615 RIANVASVIKSL 626
>gi|58258225|ref|XP_566525.1| two-component sensor molecule [Cryptococcus neoformans var.
neoformans JEC21]
gi|134106161|ref|XP_778091.1| hypothetical protein CNBA0940 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260794|gb|EAL23444.1| hypothetical protein CNBA0940 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57222662|gb|AAW40706.1| two-component sensor molecule, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|125987888|dbj|BAF47083.1| CnHHK7 [Cryptococcus neoformans var. neoformans]
Length = 1211
Score = 82.0 bits (201), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/126 (37%), Positives = 72/126 (57%), Gaps = 7/126 (5%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV----DLF--RTGA-KFHIVFID 78
P +LVVDDD + R + S +L +G V AENGK A D+F + GA KF IVF+D
Sbjct: 1054 PLSSLVVDDDKLTRMLMSRMLTRLGHHVTTAENGKIASEMIKDMFENKEGAIKFDIVFLD 1113
Query: 79 MEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
+MP+M G+E +A+R M IVG T +++ +M AG D TKP+ ++ +
Sbjct: 1114 NQMPLMSGVEVARAVREMNCPIYIVGCTGNALREDQDEYMAAGADTILTKPIHQKHLIEM 1173
Query: 139 LEELQK 144
+ + ++
Sbjct: 1174 IRDARR 1179
>gi|321251195|ref|XP_003191987.1| two-component sensor molecule [Cryptococcus gattii WM276]
gi|317458455|gb|ADV20200.1| Two-component sensor molecule, putative [Cryptococcus gattii WM276]
Length = 1208
Score = 81.6 bits (200), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 81/151 (53%), Gaps = 10/151 (6%)
Query: 1 MMIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGK 60
+M+ A G ++ E+P ++ P +LVVDDD + R + S +L +G V AENGK
Sbjct: 1029 IMLNAGGVQ--RQPETKEDPPAE-MPLSSLVVDDDKLTRMLMSRMLTRLGHHVTTAENGK 1085
Query: 61 EAVDLFRT-------GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETE 113
A ++ + KF IVF+D +MP+M G+E +A+R M IVG T +
Sbjct: 1086 IASEMIKDMIENKEGSVKFDIVFLDNQMPLMSGVEVARAVREMNCPIYIVGCTGNALRED 1145
Query: 114 REVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
++ +M AG D TKP+ ++ ++ + ++
Sbjct: 1146 QDEYMAAGADTILTKPIHQKHLIEMIRDARR 1176
>gi|401880755|gb|EJT45070.1| two-component sensor molecule [Trichosporon asahii var. asahii CBS
2479]
Length = 1230
Score = 81.6 bits (200), Expect = 1e-13, Method: Composition-based stats.
Identities = 48/142 (33%), Positives = 78/142 (54%), Gaps = 3/142 (2%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E S+ + R+ + S R ALVVDDD + RR+ S +L +G V +NGK+AVDL
Sbjct: 1078 ETVPSTSRHRMDQRRRSSGRSLSALVVDDDSLTRRLMSRMLSRLGHMVTTVDNGKKAVDL 1137
Query: 66 FRTGAK---FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
A F IVF+D +M +M G+EA A+R + ++ +VG T +++ ++ +G
Sbjct: 1138 ILENAADNPFDIVFLDNQMLIMTGVEAVAALRQVGNDTYVVGCTGNALREDQDEYLSSGA 1197
Query: 123 DLCYTKPLTMAKIVPLLEELQK 144
+ KP+ A I+ L E ++
Sbjct: 1198 NAIIAKPVHQAAIIEHLAEAKR 1219
>gi|110596967|ref|ZP_01385257.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A-like:Hpt [Chlorobium
ferrooxidans DSM 13031]
gi|110341654|gb|EAT60114.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A-like:Hpt [Chlorobium
ferrooxidans DSM 13031]
Length = 854
Score = 81.6 bits (200), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/124 (36%), Positives = 72/124 (58%), Gaps = 9/124 (7%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD+ RRI S +L++ G+ +E A NG+EA+ L F ++ +D++MPVMDGIEA
Sbjct: 581 LLVDDNETSRRIMSALLENYGYHIEQAVNGREALSLLEK-EDFDLILMDVDMPVMDGIEA 639
Query: 90 TKAMRAMKVESK--------IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
TKA+R+ K + I+ +T N E + +AG++ KP+ K++ +
Sbjct: 640 TKAIRSGKNFFRFRAGKTIPIIAITGNNDEQSSRILKEAGVNFHLCKPVFKDKLITTINV 699
Query: 142 LQKN 145
L KN
Sbjct: 700 LLKN 703
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 15/142 (10%)
Query: 11 SKKAR-ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
SK R I N + K R LV DDD R I S L + +++ AENG +AV + +
Sbjct: 421 SKTVREIKRNILRKKR---ILVTDDDSSNRLIISKYLSELHCQIDQAENGLQAVAMV-SE 476
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRAMKV----------ESKIVGVTSRNSETEREVFMQ 119
++ ++FID EMP ++G A K +R+ + + I+G+TS E +
Sbjct: 477 KRYDLIFIDFEMPFLNGDRAVKLIRSAQNIDPSLALHYRDVPIIGITSLPKPEATERAEK 536
Query: 120 AGLDLCYTKPLTMAKIVPLLEE 141
G++ KP+++ ++E+
Sbjct: 537 NGMNEVLAKPVSVTTTRKIIEK 558
>gi|436840344|ref|YP_007324722.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
gi|432169250|emb|CCO22618.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio
hydrothermalis AM13 = DSM 14728]
Length = 717
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 72/113 (63%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ + S L GF+VE AENG EA+++ ++G F ++ +D++MP MDG+EA
Sbjct: 601 LLAEDNATNQVYISHFLTEEGFQVETAENGLEALEMLKSGGPFDLILMDVQMPEMDGLEA 660
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TK +R + I+ +T+ E +RE F+++G+D +KP+ + ++ L+ +L
Sbjct: 661 TKKIRDSGDDIPIIALTAYAMEGDREKFLKSGMDAYSSKPVKIDELTKLINKL 713
>gi|16126905|ref|NP_421469.1| sensory box histidine kinase/response regulator [Caulobacter
crescentus CB15]
gi|221235688|ref|YP_002518125.1| GAF/PAS-family histidine kinase/receiver protein [Caulobacter
crescentus NA1000]
gi|13424253|gb|AAK24637.1| sensory box histidine kinase/response regulator [Caulobacter
crescentus CB15]
gi|220964861|gb|ACL96217.1| GAF/PAS-family histidine kinase/receiver protein [Caulobacter
crescentus NA1000]
Length = 690
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 71/110 (64%), Gaps = 4/110 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D P+ +R+ +IL+ G V V ENG +AV+ +GA F +V +DM+MPVMDG+ A
Sbjct: 573 LLAEDHPINQRVVQLILEPCGAAVTVVENGAQAVEAMASGA-FDVVLMDMQMPVMDGLAA 631
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
T+A+RA + E + I+ +++ + R +QAG DL KP+T+A ++
Sbjct: 632 TRAIRAREGEGQRTPIIMLSANAMDVHRREALQAGADLHVPKPITIAALL 681
>gi|303287424|ref|XP_003063001.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455637|gb|EEH52940.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 116
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M +++ +++K G ++A NGKEAVD+ R GA++ + +D++MPVMDG++A
Sbjct: 1 LIVEDNVMNQKVARVVVKHCGMSSDLANNGKEAVDILRGGARYDAILMDVQMPVMDGLDA 60
Query: 90 TKAMRAMKV-----ESKIVGVTSRN--SETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+ +R M+ E + TS N +E +E F AG+D TKP+ K+ LL
Sbjct: 61 TRKIREMEASGELPERNFILATSANATAENHQEGF-AAGMDEYITKPIYPTKLKELL 116
>gi|334117198|ref|ZP_08491290.1| multi-sensor hybrid histidine kinase [Microcoleus vaginatus FGP-2]
gi|333462018|gb|EGK90623.1| multi-sensor hybrid histidine kinase [Microcoleus vaginatus FGP-2]
Length = 1314
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 72/123 (58%), Gaps = 4/123 (3%)
Query: 11 SKKARISENPVSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
SKK++ + N+P Y L+VDD P+ R++ +L +GF++ A NGKEAVD+F
Sbjct: 1087 SKKSQRRVIALEPNQPSYRLLIVDDKPLNRQLLVKLLSPLGFELREANNGKEAVDIFMEW 1146
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYT 127
H++++DM MPVMDG EATK ++ + IV +T+ E ER V + AG D
Sbjct: 1147 EP-HLIWMDMRMPVMDGYEATKQIKTTTGGQATAIVALTASVLEEERAVILSAGCDDFMR 1205
Query: 128 KPL 130
KP
Sbjct: 1206 KPF 1208
>gi|262195164|ref|YP_003266373.1| PAS/PAC sensor hybrid histidine kinase [Haliangium ochraceum DSM
14365]
gi|262078511|gb|ACY14480.1| PAS/PAC sensor hybrid histidine kinase [Haliangium ochraceum DSM
14365]
Length = 650
Score = 80.9 bits (198), Expect = 1e-13, Method: Composition-based stats.
Identities = 49/144 (34%), Positives = 80/144 (55%), Gaps = 9/144 (6%)
Query: 4 GAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
G GAS + SE LVVDD+ + + + +L+ G +V VAENG++AV
Sbjct: 513 GGAGASGT-----SEAEAEAESRLHVLVVDDNALNQTLARTLLQRRGHRVTVAENGQQAV 567
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQA 120
L G+ F V +D+ MP MDG+ AT+A+RAM + + IVG+T+ RE ++ +
Sbjct: 568 ALVARGS-FDAVLMDVHMPTMDGLAATRAIRAMGLSASQLPIVGLTASVVNDNREEYLAS 626
Query: 121 GLDLCYTKPLTMAKIVPLLEELQK 144
G++ C KP +A++ +L ++
Sbjct: 627 GMNDCIGKPFRVAELFAVLSRQRR 650
>gi|406836202|ref|ZP_11095796.1| sensor protein [Schlesneria paludicola DSM 18645]
Length = 1992
Score = 80.9 bits (198), Expect = 2e-13, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
A SS + E V+ +P L+VDD P+ R + + +L+ G V+ A NG+EAV+
Sbjct: 1842 ALSVSSGNDGSLREEAVTTQQPMRILLVDDAPVNREVATGLLEMFGHHVQTATNGREAVE 1901
Query: 65 LFRTGAKFHIVFIDMEMPVMDG----IEATKAMRAMKVESKIVGVTSRNSETEREVFMQA 120
L + A F +V +D+EMP MDG IE K ++ V + I +T+ + R+ ++A
Sbjct: 1902 LLESQA-FDVVLMDLEMPEMDGMSAAIEIRKREQSKSVSTPIFAMTAHATNDIRDRCLEA 1960
Query: 121 GLDLCYTKPLTMAKIVPLLEELQKN 145
G+D TKP+ +++ LE L+ +
Sbjct: 1961 GMDGYLTKPIQPDELMATLESLESS 1985
Score = 37.7 bits (86), Expect = 1.4, Method: Composition-based stats.
Identities = 26/91 (28%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
A++S+K+RI PV L+VDD P R + + L+ +G + + N + A + R
Sbjct: 1707 AAASEKSRIVFPPVP------VLIVDDHPTSRSVLTDTLEQMGLQPQAVHNAETAYLMMR 1760
Query: 68 ----TGAKFHIVFIDMEMPVMDGIEATKAMR 94
+ +V ID MP DG + +R
Sbjct: 1761 YAVMSQTPTQLVLIDAMMPGQDGWALAEQIR 1791
>gi|326515860|dbj|BAK07176.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 134
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
AL+V+D + R + S IL ++ +V +A NGKEAV+LF G KF IV +D +MP+M G E
Sbjct: 13 ALLVEDIEVCRLVLSTILLAMNCEVTLAVNGKEAVELFLEGKKFDIVLLDKDMPIMTGPE 72
Query: 89 ATKAMRAM-KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
A +RAM + + KIVGV++ + E FM AG D KP+ ++P+++E+
Sbjct: 73 AVVKIRAMGEGDVKIVGVSADDHAM--EAFMNAGADAFVPKPMRREVLIPIIQEI 125
>gi|374581469|ref|ZP_09654563.1| PAS domain S-box [Desulfosporosinus youngiae DSM 17734]
gi|374417551|gb|EHQ89986.1| PAS domain S-box [Desulfosporosinus youngiae DSM 17734]
Length = 1157
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 80/129 (62%), Gaps = 5/129 (3%)
Query: 18 ENPVSKN-RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++P+ K P L+V+DD + +++ + +LK G +VE A NGKEA+ LF+ G + ++
Sbjct: 903 QSPILKAANPTSVLLVEDDAINQKVIAKMLKEKGHRVETASNGKEALGLFKPGV-YDVIL 961
Query: 77 IDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+D++MP MDGIEA+K +R M+ I+ +T+ + +RE F+ G+D +KP+ M
Sbjct: 962 MDIQMPEMDGIEASKKIREMEDPGNYIPIIAMTAYALQGDRERFLALGMDGYVSKPIQMG 1021
Query: 134 KIVPLLEEL 142
++ ++ L
Sbjct: 1022 ELFYTIDRL 1030
>gi|218782287|ref|YP_002433605.1| multi-sensor hybrid histidine kinase [Desulfatibacillum alkenivorans
AK-01]
gi|218763671|gb|ACL06137.1| multi-sensor hybrid histidine kinase [Desulfatibacillum alkenivorans
AK-01]
Length = 1349
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 86/142 (60%), Gaps = 7/142 (4%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
A S+K ++ + + +N L+V+D + +++ I++++G V VA+NG+E ++ F+
Sbjct: 1074 AGESRKM-VTRHTLMENSKLRVLLVEDQMVNQKVAVKIIQNMGHGVVVADNGQEGLEAFK 1132
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGL 122
GA F IVF+D++MPVMDG+ AT A+R ++ E I+ T+ E ++E F+ AG+
Sbjct: 1133 NGA-FDIVFMDVQMPVMDGLAATAAIRKLESEENRARIPIIAFTAHAMEGDKERFLSAGM 1191
Query: 123 DLCYTKPLTMAKIVPLLEELQK 144
D TKP+ + ++E+ K
Sbjct: 1192 DDYLTKPVKKDALTRVMEKATK 1213
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/62 (37%), Positives = 39/62 (62%), Gaps = 1/62 (1%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P LVVDD+ +IR+ + L+ G++V+ AENG++A+ + + +D+ MPVMD
Sbjct: 5 PGKILVVDDELVIRKSLRLALEDEGYEVQEAENGQDALVMVSKNPP-DCILLDLRMPVMD 63
Query: 86 GI 87
G+
Sbjct: 64 GL 65
>gi|428318929|ref|YP_007116811.1| multi-sensor hybrid histidine kinase [Oscillatoria nigro-viridis PCC
7112]
gi|428242609|gb|AFZ08395.1| multi-sensor hybrid histidine kinase [Oscillatoria nigro-viridis PCC
7112]
Length = 1315
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/123 (39%), Positives = 71/123 (57%), Gaps = 4/123 (3%)
Query: 11 SKKARISENPVSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
SKK + + N+P Y L+VDD P+ R++ +L +GF++ A NGKEAVD+F
Sbjct: 1088 SKKTQRRVVALEPNQPSYRLLIVDDKPLNRQLLVKLLSPLGFELREANNGKEAVDIFMEW 1147
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYT 127
H++++DM MPVMDG EATK ++ + IV +T+ E ER V + AG D
Sbjct: 1148 EP-HLIWMDMRMPVMDGYEATKQIKTTTGGQATAIVALTASVLEEERAVILSAGCDDFMR 1206
Query: 128 KPL 130
KP
Sbjct: 1207 KPF 1209
>gi|374579438|ref|ZP_09652532.1| PAS domain S-box [Desulfosporosinus youngiae DSM 17734]
gi|374415520|gb|EHQ87955.1| PAS domain S-box [Desulfosporosinus youngiae DSM 17734]
Length = 908
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 80/138 (57%), Gaps = 4/138 (2%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
SSK+A + +P L+V+DD + ++ S++LK G V+ A NG EA+ L
Sbjct: 649 GESSKQAHLETGVTPVAKPLKILIVEDDKVNLKVLSLMLKGKGHFVDTASNGSEAL-LLH 707
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDL 124
++ +F+D++MP+MDGIEATK +R + S+ I+ +T+ + ++E F+ G+D
Sbjct: 708 GRTQYDAIFMDIQMPIMDGIEATKHIRQREGVSRHTPIIALTAYALKGDKEKFLSCGMDE 767
Query: 125 CYTKPLTMAKIVPLLEEL 142
KP+ M + +LE++
Sbjct: 768 YIPKPINMETLFTILEQV 785
>gi|434405267|ref|YP_007148152.1| bacteriophytochrome (light-regulated signal transduction histidine
kinase) [Cylindrospermum stagnale PCC 7417]
gi|428259522|gb|AFZ25472.1| bacteriophytochrome (light-regulated signal transduction histidine
kinase) [Cylindrospermum stagnale PCC 7417]
Length = 998
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 44/106 (41%), Positives = 69/106 (65%), Gaps = 3/106 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D P R++ +LKSVGF+V AENG EA+D+ + H +++D++MPVMDG
Sbjct: 792 YRILVVEDVPENRQLIVKLLKSVGFEVRAAENGLEAIDICQEWEP-HFIWMDIQMPVMDG 850
Query: 87 IEATKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
EAT+ +RA+ + + KI+ +T+ E +R+ ++ G D TKP
Sbjct: 851 REATQRIRAITQRKDLKIIALTASAFEEDRKAILEIGCDDFVTKPF 896
>gi|242280792|ref|YP_002992921.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio salexigens
DSM 2638]
gi|242123686|gb|ACS81382.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio salexigens
DSM 2638]
Length = 719
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 68/113 (60%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ + + L GF+VE AENG EA+DL F ++ +D++MP MDG+EA
Sbjct: 601 LLAEDNATNQLYIAHFLTEQGFEVETAENGLEALDLLDNSGPFDVILMDVQMPEMDGLEA 660
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TK +R E I+ +T+ E +RE F+ G+D +KP+ + ++V ++ +L
Sbjct: 661 TKKIREQGNEIPIIALTAYAMEGDREKFLSNGMDAYSSKPVNIDELVQIIGKL 713
>gi|320103510|ref|YP_004179101.1| multi-sensor hybrid histidine kinase [Isosphaera pallida ATCC
43644]
gi|319750792|gb|ADV62552.1| multi-sensor hybrid histidine kinase [Isosphaera pallida ATCC
43644]
Length = 1215
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P LVV+D+P +RR+ + L + G++VE A +G+E + T F ++ +D++MP +D
Sbjct: 862 PSSILVVEDNPDLRRVLTAFLTAAGWRVETASDGEEGLAK-ATTTSFDLILMDLQMPRLD 920
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
G+EAT+ +RA V + IV +T+ + + ER+ ++ G D TKP+ +++ L +
Sbjct: 921 GVEATRRLRARGVVTPIVALTANDLDGERQRCLEQGFDDYLTKPVGQGELIQRLAQ 976
>gi|224072596|ref|XP_002303798.1| predicted protein [Populus trichocarpa]
gi|222841230|gb|EEE78777.1| predicted protein [Populus trichocarpa]
Length = 433
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 65/113 (57%), Gaps = 9/113 (7%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVG----FKVEVAE--NGKEAVDLFRTGAKFHIVFIDME 80
Y L+V DD R I VG F +E E NGKEAV L GA F ++ +D +
Sbjct: 324 YSVLIVHDDRDARDIIQRYTMPVGTEKHFTLEFQEARNGKEAVYLHLAGASFDLIIMDDQ 383
Query: 81 MPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
MP+M GI+AT+ +R M V+S I+GVT SE++++ F+ AG D C PL A
Sbjct: 384 MPIMTGIQATQLLRKMGVKSPIIGVT---SESDQQAFIDAGADECLKMPLDTA 433
>gi|373458372|ref|ZP_09550139.1| response regulator receiver protein [Caldithrix abyssi DSM 13497]
gi|371720036|gb|EHO41807.1| response regulator receiver protein [Caldithrix abyssi DSM 13497]
Length = 705
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 47/119 (39%), Positives = 74/119 (62%), Gaps = 6/119 (5%)
Query: 16 ISENPVSKNRPYF-ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI 74
I+ + + ++ P LV +D+ + +++ ILK GF+VE+A NGKEAV+LFR F +
Sbjct: 566 ITRHTLKESEPALKVLVAEDNRVNQKLMISILKRAGFQVELARNGKEAVELFRQ-KPFDL 624
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKP 129
V +DM+MPVMDG AT+ MR ++ ES I +T+ + E E ++AG+D+ KP
Sbjct: 625 VLMDMQMPVMDGYTATREMRKLEEESGKHTPIFALTASDDAREIEGALKAGVDMVLRKP 683
Score = 38.1 bits (87), Expect = 1.1, Method: Composition-based stats.
Identities = 32/118 (27%), Positives = 54/118 (45%), Gaps = 3/118 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D R L GFK+ A NGK A++ K ++ D+ MP M+G+E
Sbjct: 6 LVVEDSLAQRFFIEKALAGDGFKITTAANGKLALEKIHE-QKPDLILSDIMMPEMNGMEL 64
Query: 90 TKAMRAMKVESKI--VGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
KA+++ I V +T+ N E ++ G D + K ++ + + +N
Sbjct: 65 CKAVKSHPQLQTIPVVLMTTLNEPKEIIKIIECGADYLFLKEFEPGALLSFVNDALQN 122
>gi|254477790|ref|ZP_05091176.1| sensory box histidine kinase/response regulator [Ruegeria sp. R11]
gi|214032033|gb|EEB72868.1| sensory box histidine kinase/response regulator [Ruegeria sp. R11]
Length = 849
Score = 80.1 bits (196), Expect = 2e-13, Method: Composition-based stats.
Identities = 49/136 (36%), Positives = 81/136 (59%), Gaps = 8/136 (5%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
G +++AR NP++ P L+V+D+P+ R + +L++ G V A NG+EAVDL
Sbjct: 590 GPIHARQAR--GNPITG--PRKVLLVEDNPINRDVAREMLRAAGHYVVEAHNGREAVDLA 645
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLD 123
R G +F ++ +D+ MPVMDG AT+A+RA+ + IV +T+ E+ F++ G+D
Sbjct: 646 RAG-RFDLILMDISMPVMDGRSATRAIRALNGPASLTPIVALTANVMAEEQAAFLEDGMD 704
Query: 124 LCYTKPLTMAKIVPLL 139
TKPL+ ++ L
Sbjct: 705 GILTKPLSKDALLGLF 720
>gi|94271091|ref|ZP_01291888.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93450562|gb|EAT01700.1| Response regulator receiver [delta proteobacterium MLMS-1]
Length = 421
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D+ R + + +L++ G +V A NG+EAV+++R+G + ++ +DM MP +DG+EA
Sbjct: 303 LVAEDNEFNRLLLTDLLQNHGHRVLAASNGREAVEIYRSG-QCQLILMDMMMPELDGLEA 361
Query: 90 TKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
T+A+R ++ + IVGVT+ E + + AG+D C+TKP+ + ++
Sbjct: 362 TRAIRRLEAQGGSRIPIVGVTAGTQPEEIQKCLAAGMDCCFTKPVDIKSLL 412
>gi|307721594|ref|YP_003892734.1| histidine kinase [Sulfurimonas autotrophica DSM 16294]
gi|306979687|gb|ADN09722.1| histidine kinase [Sulfurimonas autotrophica DSM 16294]
Length = 654
Score = 80.1 bits (196), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 84/140 (60%), Gaps = 4/140 (2%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
A+S K EN + ALVV+D+ + +R+ ++L+ KV A NG EAV +++
Sbjct: 508 ANSFKYTSDDENQLKIKDKIDALVVEDNLINQRLIKILLQEYNIKVSTASNGLEAVKMYK 567
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAM---KVESKIVGVTSRNSETEREVFMQAGLDL 124
K+ I+F+D++MP M+GI ATK ++ M K ++ IV +T+ E ++E+ ++ GLD
Sbjct: 568 K-KKYDIIFMDIDMPYMNGIVATKEIKDMMLLKSQAPIVALTAMAMEGDKEMLLKEGLDD 626
Query: 125 CYTKPLTMAKIVPLLEELQK 144
+KPLT K+ +L++ K
Sbjct: 627 YISKPLTREKLEYILDKYLK 646
>gi|392423698|ref|YP_006464692.1| signal transduction histidine kinase [Desulfosporosinus acidiphilus
SJ4]
gi|391353661|gb|AFM39360.1| signal transduction histidine kinase [Desulfosporosinus acidiphilus
SJ4]
Length = 914
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 72/113 (63%), Gaps = 4/113 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D + +RI ++LK +G+ +A NGK+AV+L T K+ I+F+D +MPVMDG EA
Sbjct: 794 LLVEDKEVNQRIELIMLKRLGYSANIAVNGKQAVELCDT-RKYDIIFMDCQMPVMDGYEA 852
Query: 90 TKAMRAMKV---ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T +R M S I+ +T+ E +RE + AG+D +KP+T+A + +L
Sbjct: 853 TDRIRKMSSLNKHSPIIAMTAHAMEGDRERCVAAGMDDYISKPVTLAALEEML 905
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH---IVFIDMEMPVMDG 86
L+VDD+ R I LK KV NG+E +++ + + I+ +D MP M G
Sbjct: 647 LIVDDNESNRMIFREYLKETNCKVMSVNNGREGLEILKGLGDENLPQIILVDYMMPEMTG 706
Query: 87 IEATKAMRAMK 97
IE K ++ ++
Sbjct: 707 IEFGKKVKEIE 717
>gi|357473535|ref|XP_003607052.1| Sensor protein rcsC [Medicago truncatula]
gi|357496187|ref|XP_003618382.1| Sensor protein rcsC [Medicago truncatula]
gi|355493397|gb|AES74600.1| Sensor protein rcsC [Medicago truncatula]
gi|355508107|gb|AES89249.1| Sensor protein rcsC [Medicago truncatula]
Length = 151
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 67/111 (60%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P AL+VD RR+ +L+S+G + E A + +EA+ + TG KF +F+D ++P+++
Sbjct: 32 PMNALLVDGVTATRRLEHHMLESIGIQTEPANSAQEAMQILLTGVKFDFIFVDFDLPIIN 91
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
G E + MRAM ++SK+VG+ + ++ ++F +A + KPLT V
Sbjct: 92 GPELVRQMRAMGIQSKVVGMLTNFNDQNVQMFGEARANASTPKPLTRESFV 142
>gi|93007292|ref|YP_581729.1| PAS/PAC sensor hybrid histidine kinase [Psychrobacter
cryohalolentis K5]
gi|92394970|gb|ABE76245.1| PAS/PAC sensor hybrid histidine kinase [Psychrobacter
cryohalolentis K5]
Length = 974
Score = 79.7 bits (195), Expect = 3e-13, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMPVMDGIE 88
LVV+D P ++I +L +G++ VAE+G++A+D+ + + ++ +D MPVMDG++
Sbjct: 858 LVVEDSPTNQKIACKMLAKLGYRSVVAEDGQQALDILQAQRQEIDLILMDCRMPVMDGLQ 917
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
AT+A+RA + IV +T+ N+E +R ++ G+D KP+ K+ +L L K
Sbjct: 918 ATQAIRAQGDDIPIVALTANNTEEDRSACLKVGMDEFLAKPINKDKLQDVLTALIK 973
>gi|94266984|ref|ZP_01290632.1| PAS:Response regulator receiver:CHASE [delta proteobacterium
MLMS-1]
gi|93452318|gb|EAT02952.1| PAS:Response regulator receiver:CHASE [delta proteobacterium
MLMS-1]
Length = 875
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 72/111 (64%), Gaps = 5/111 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D+ R + + +L++ G +V A NG+EAV+++R+G + ++ +DM MP +DG+EA
Sbjct: 757 LVAEDNDFNRLLLTDLLQNHGHRVLAASNGREAVEIYRSG-QCQLILMDMMMPELDGLEA 815
Query: 90 TKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
T+A+R ++ E IVGVT+ E E + AG+D C+TKP+ + ++
Sbjct: 816 TRAIRRLEAEGGSRIPIVGVTAGTQPEELEKCLAAGMDCCFTKPVDIKSLL 866
>gi|408793227|ref|ZP_11204837.1| GHKL domain protein [Leptospira meyeri serovar Hardjo str. Went 5]
gi|408464637|gb|EKJ88362.1| GHKL domain protein [Leptospira meyeri serovar Hardjo str. Went 5]
Length = 762
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 72/118 (61%), Gaps = 4/118 (3%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
++ ++ P L+ DDDP+ +++ + LK +GF A+NG++ +D+ R+ + +VF+
Sbjct: 626 DSKLANKYPVKVLIADDDPINQKVSDLFLKKLGFTALQADNGEKTLDMVRS-EQPDLVFM 684
Query: 78 DMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D++MP MDGI TK +R K SK I+ +T+ E E++ + AG+D TKPL +
Sbjct: 685 DIQMPDMDGITVTKCIRQSKTISKQPVIIALTANVLEEEKQRCLSAGMDDFMTKPLLL 742
>gi|119503084|ref|ZP_01625169.1| Response regulator receiver [marine gamma proteobacterium HTCC2080]
gi|119461430|gb|EAW42520.1| Response regulator receiver [marine gamma proteobacterium HTCC2080]
Length = 1448
Score = 79.7 bits (195), Expect = 4e-13, Method: Composition-based stats.
Identities = 50/135 (37%), Positives = 78/135 (57%), Gaps = 6/135 (4%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E A SSK A+ + S L+V+D+ + + + ILKS+G + +AENG EAV L
Sbjct: 1173 EEALSSKAAQAAAPTPSLQINADVLIVEDNKVNQILVQEILKSMGLRSNLAENGLEAVTL 1232
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQA 120
FR +F +V +D +MPVMDG EATK +R ++ E + I+ +T+ E E + +
Sbjct: 1233 FRR-QRFDLVLMDCQMPVMDGFEATKLIREIESERDYERTPIIALTAAARAEEYEQALSS 1291
Query: 121 GLDLCYTKPLTMAKI 135
G+D TKP +A++
Sbjct: 1292 GMDEFMTKPFNVAQL 1306
>gi|224053438|ref|XP_002297819.1| extra response regulator [Populus trichocarpa]
gi|222845077|gb|EEE82624.1| extra response regulator [Populus trichocarpa]
Length = 328
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/122 (43%), Positives = 69/122 (56%), Gaps = 9/122 (7%)
Query: 27 YFALVVDDDPMIRRIHSMILKSV------GFKVEVAENGKEAVDLFRTGAKFHIVFIDME 80
Y LVVDD+ R +L S V+VA+NGKEAV L GA F ++ +D
Sbjct: 203 YCVLVVDDNCEDRESLRELLMSFKSQTTPTMDVQVAKNGKEAVYLHLAGASFDMIVMDDL 262
Query: 81 MPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
MPVM+GIEATK + M V S IVGV +T ++ F+ AG+D KPLT AK+ L
Sbjct: 263 MPVMNGIEATKQLFGMGVISFIVGV---GDDTVKQAFIDAGIDQYIEKPLTPAKVADLFP 319
Query: 141 EL 142
+L
Sbjct: 320 DL 321
>gi|408672306|ref|YP_006872054.1| multi-sensor hybrid histidine kinase [Emticicia oligotrophica DSM
17448]
gi|387853930|gb|AFK02027.1| multi-sensor hybrid histidine kinase [Emticicia oligotrophica DSM
17448]
Length = 1101
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 80/139 (57%), Gaps = 2/139 (1%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
S S +A I N L+VDD+ + R++ S IL G +V A++G +A+++F
Sbjct: 822 SESSEAEIQLTNFFSNHTPKILLVDDNQVNRKVASEILIKAGCEVLTADSGAKAIEVFGE 881
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCY 126
G F ++F+D++MP MDGIE TK +R + + KIV +T+ + + +RE F+ G+D
Sbjct: 882 GHGFDVIFMDIQMPEMDGIETTKRLRQLYGNALPKIVAMTAYSMQHDRERFLSEGMDDYV 941
Query: 127 TKPLTMAKIVPLLEELQKN 145
KP+ + ++ + E+ N
Sbjct: 942 PKPIRASILIQKVNEIVPN 960
>gi|453063756|gb|EMF04732.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Serratia marcescens VGH107]
Length = 953
Score = 79.3 bits (194), Expect = 4e-13, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
+ N + LVVDD P+ RR+ S L S+G++V A +G +A+ + + IV D+ M
Sbjct: 823 ADNGDIYLLVVDDHPINRRLLSDQLGSLGYQVVTANDGVDALGVLKQ-HHVDIVLTDVNM 881
Query: 82 PVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
P MDG T+A+R M+ + ++GVT+ E++ ++AG+D C +KP+T+
Sbjct: 882 PNMDGYRLTQALRQMQFSAPVIGVTANALAEEKQRCLEAGMDNCLSKPVTL 932
>gi|448243134|ref|YP_007407187.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Serratia marcescens WW4]
gi|445213498|gb|AGE19168.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Serratia marcescens WW4]
Length = 934
Score = 79.3 bits (194), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/111 (36%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
+ N + LVVDD P+ RR+ S L S+G++V A +G +A+ + + IV D+ M
Sbjct: 804 ADNGDIYLLVVDDHPINRRLLSDQLGSLGYQVVTANDGVDALAVLKQ-HHVDIVLTDVNM 862
Query: 82 PVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
P MDG T+A+R M+ + ++GVT+ E++ ++AG+D C +KP+T+
Sbjct: 863 PNMDGYRLTQALREMQFSAPVIGVTANALAEEKQRCLEAGMDNCLSKPVTL 913
>gi|320354894|ref|YP_004196233.1| histidine kinase [Desulfobulbus propionicus DSM 2032]
gi|320123396|gb|ADW18942.1| histidine kinase [Desulfobulbus propionicus DSM 2032]
Length = 717
Score = 79.0 bits (193), Expect = 5e-13, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 75/114 (65%), Gaps = 2/114 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-RTGAKFHIVFIDMEMPVMDGIE 88
L+ +D+P+ +++ +IL G++VEVA NG++AVDLF R F ++ +D++MP MDG+
Sbjct: 596 LLAEDNPVNQKLAVLILNKAGYQVEVASNGRKAVDLFTRRPENFDLILMDIQMPEMDGLA 655
Query: 89 ATKAMRAMKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
ATK +R+ + IV +T+ + +RE+ ++AG++ TKP+ I ++E+
Sbjct: 656 ATKELRSRGFNTVPIVAMTANAMKGDREICLKAGMNDYITKPVKREIIFEIIEK 709
Score = 35.0 bits (79), Expect = 8.9, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 49/119 (41%), Gaps = 6/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG----AKFHIVFIDMEMPVMD 85
LVVDD+ I IL + V + + + A F ++ +D++MP D
Sbjct: 445 LVVDDNLTNLSILRHILMAAELHVVAIHDSSNVRSVLQQAIENHALFDLIILDIQMPAPD 504
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREV--FMQAGLDLCYTKPLTMAKIVPLLEEL 142
G +R E+ + + + S TER +AG D TKP + +E+L
Sbjct: 505 GYALAHIIRHELAETATIPLLAYTSSTERNAQRCKEAGFDAFLTKPTRREILFKTIEKL 563
>gi|322421925|ref|YP_004201148.1| multi-sensor hybrid histidine kinase [Geobacter sp. M18]
gi|320128312|gb|ADW15872.1| multi-sensor hybrid histidine kinase [Geobacter sp. M18]
Length = 951
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 48/141 (34%), Positives = 81/141 (57%), Gaps = 8/141 (5%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
G SS+ + + S P L+V+D+P+ + + + +L+ G +V VA NG EA+D+
Sbjct: 651 GMSSAVQPQQSAEPGPVRLSAEVLLVEDNPVNQDVATAMLECSGCRVSVANNGAEALDVM 710
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK-------IVGVTSRNSETEREVFMQ 119
T +F ++F+D +MPVMDG AT+A+R + S+ I+ +T+ +RE
Sbjct: 711 -TRRRFDLIFMDCQMPVMDGYAATRAIRQCEGNSQAGSGRRTIIALTAHAMRGDREECFA 769
Query: 120 AGLDLCYTKPLTMAKIVPLLE 140
AG+D TKP T A++V +L+
Sbjct: 770 AGMDDYLTKPFTQAQLVAVLQ 790
Score = 48.5 bits (114), Expect = 8e-04, Method: Composition-based stats.
Identities = 33/122 (27%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK----FHIVFIDMEMP 82
Y AL+VDD+ I L + G ++A+N A+ L R A+ + + +DM MP
Sbjct: 526 YRALLVDDNSTNLSIMHHELHAWGMTADMADNAATALGLMRHAARAESPYDLAILDMLMP 585
Query: 83 VMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
M+GIE +A++A +++++ VTS + ++AG+ +KP+ +++ +
Sbjct: 586 EMNGIELARAIKANPDLAQTRLLMVTSVGQYGDEAEAVKAGIGCYISKPVRQSRLYSAII 645
Query: 141 EL 142
+L
Sbjct: 646 DL 647
>gi|359463949|ref|ZP_09252512.1| two-component hybrid histidine kinase sensor and regulator
[Acaryochloris sp. CCMEE 5410]
Length = 762
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 73/110 (66%), Gaps = 1/110 (0%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
PY LVV+D P R I M+L++VGF+V+ AENG++AVD+ +T H++++D+++P+++
Sbjct: 557 PYRILVVEDYPDNREILVMMLEAVGFEVKEAENGQQAVDINQTWQP-HLIWMDLQLPLLN 615
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
G+EAT+ ++A I+ +T++ E + ++AG D KP A++
Sbjct: 616 GLEATQLIKAQDNPPVIIAITAQALEADEVKALKAGCDNYLRKPYQAAQV 665
>gi|429851789|gb|ELA26952.1| histidine kinase m232p [Colletotrichum gloeosporioides Nara gc5]
Length = 1062
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDME 80
S PY L+VDD+ + +I S +K +G K A +GK+AV+ FR G ++ +F+D+
Sbjct: 933 SDGDPYLFLLVDDNVINLKILSEYMKKLGHKYTTAMDGKQAVEAFRKGEGRYKCIFMDIS 992
Query: 81 MPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
MPVMDG EAT+ +R + ++ +T S + +E +G+DL TKP+ + ++
Sbjct: 993 MPVMDGFEATREIRVFETRKNMPRCQVFALTGLASASAQEEAFASGIDLFLTKPVKLKEL 1052
Query: 136 VPLLE 140
+L+
Sbjct: 1053 SKILQ 1057
>gi|410464903|ref|ZP_11318289.1| PAS domain S-box [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409981982|gb|EKO38485.1| PAS domain S-box [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 900
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 7/117 (5%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG--AKFHIVFIDMEMPVM 84
+ L+V+DDPM R +L+ VG+ V AENG+EA+D+ I+ +D++MPVM
Sbjct: 766 HVVLIVEDDPMNRMAAQRMLQKVGYTVHTAENGQEALDVLAAEHPRPVDIILMDIQMPVM 825
Query: 85 DGIEATKAMR-----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
DG+EAT+ +R + I+ +T+ +RE F++AGLD KP+ +A+++
Sbjct: 826 DGLEATRRIRDNVDGLFDSQVPIIALTAYAMAGDRERFLEAGLDDHLAKPVKVAEML 882
>gi|255084277|ref|XP_002508713.1| predicted protein [Micromonas sp. RCC299]
gi|226523990|gb|ACO69971.1| predicted protein [Micromonas sp. RCC299]
Length = 149
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 73/117 (62%), Gaps = 8/117 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M +++ +++K G +VA NG EAV++ + G + ++ +D++MPVMDG+EA
Sbjct: 2 LIVEDNLMNQKVAKVVVKHCGMTADVANNGAEAVEIMKGGGLYDVILMDIQMPVMDGLEA 61
Query: 90 TKAMRAMKVESKI-----VGVTSRN--SETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+ +R M+ I + TS N +E RE + +AG+D TKP+ +K+ LL
Sbjct: 62 TQRIREMEATGTIAKGNYIVATSANATAENHREGY-EAGMDEYITKPIYPSKLKELL 117
>gi|310791348|gb|EFQ26875.1| hsp90-like protein [Glomerella graminicola M1.001]
Length = 1305
Score = 78.6 bits (192), Expect = 8e-13, Method: Composition-based stats.
Identities = 50/139 (35%), Positives = 81/139 (58%), Gaps = 8/139 (5%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
AS SK S K+R F L+VDD+ + +I + +K +G + + A +G+EA+D+FR
Sbjct: 1164 ASDSKSGERSRKD-RKSRLKF-LLVDDNALNLKILASYMKKLGHEFQNAMDGQEALDIFR 1221
Query: 68 -TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAG 121
G F V +D+ MPVMDG EAT+ +RA++ E I +TS S + ++ +G
Sbjct: 1222 KAGGGFQFVLMDISMPVMDGFEATRRIRAIEAEQCLTRCHIFALTSLASASAQQEAFASG 1281
Query: 122 LDLCYTKPLTMAKIVPLLE 140
+DL TKP+ + ++ +LE
Sbjct: 1282 IDLFLTKPVRLKELSKILE 1300
>gi|441505531|ref|ZP_20987514.1| Signal transduction histidine kinase [Photobacterium sp. AK15]
gi|441426764|gb|ELR64243.1| Signal transduction histidine kinase [Photobacterium sp. AK15]
Length = 815
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D + +++ M+L+ +G +VE+A NG EA+ FR + F ++F+D +MPVMDG A
Sbjct: 684 LVVEDTAVNQKVAKMMLEKLGVRVEIANNGAEAISRFREQS-FDVIFMDCQMPVMDGFAA 742
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
TKA+R + E I+ +T+ + E+E AG+D +KP++ + +LE+
Sbjct: 743 TKAIRTEETEGHRIPIIALTANVVKEEKEKCFAAGMDDFVSKPVSQKMLAVMLEK 797
>gi|71907451|ref|YP_285038.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase A, N-terminal, partial
[Dechloromonas aromatica RCB]
gi|71847072|gb|AAZ46568.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal
[Dechloromonas aromatica RCB]
Length = 582
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
Query: 10 SSKKARISENPVSKNRPYFA---LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
S K AR + V P A L+V+D+P+ R++ +L +G + + +NG+EAVD
Sbjct: 436 SRKTARTTSIEVPAEAPTLAGLVLIVEDNPVNRKVAQAMLGKMGIQSKSVDNGQEAVDAI 495
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAG 121
G + +++ +D +MPVMDG EAT +R ++ + IV +T+ E +R+ + AG
Sbjct: 496 AQGMRPNLILMDCQMPVMDGFEATTQIRRWEMANGQPRLPIVALTAGAFEEDRQNCLAAG 555
Query: 122 LDLCYTKPLTMAKI 135
+D TKP+ MA +
Sbjct: 556 MDDFLTKPVNMADL 569
>gi|423066179|ref|ZP_17054969.1| multi-sensor hybrid histidine kinase [Arthrospira platensis C1]
gi|406712221|gb|EKD07410.1| multi-sensor hybrid histidine kinase [Arthrospira platensis C1]
Length = 1051
Score = 78.2 bits (191), Expect = 9e-13, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D+P+ R + + +L+ VGF+V+ AENG+EA+ +++ H++F+DM MPV+DG
Sbjct: 829 YRILVVEDNPVNRLLLTTLLQDVGFEVQEAENGQEAIAIWQQWHP-HLIFMDMHMPVIDG 887
Query: 87 IEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
EAT+ ++ +V+S I+ +T+ +R+ + AG D +KP ++ LE L K
Sbjct: 888 FEATQYIKQAEVDSLPVIIAITASAFTEQRQNCINAGCDDFISKPFRREQV---LETLTK 944
>gi|359464023|ref|ZP_09252586.1| two-component hybrid histidine kinase sensor and regulator
[Acaryochloris sp. CCMEE 5410]
Length = 768
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/111 (37%), Positives = 74/111 (66%), Gaps = 2/111 (1%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
PY LVV+D P R I M+L++VGF+V+ AENG+EAVDL RT H++++D+++P+++
Sbjct: 563 PYRVLVVEDYPDNREILLMMLEAVGFEVKEAENGQEAVDLNRTWQP-HLIWMDLQLPLLN 621
Query: 86 GIEATKAMRAMKVESK-IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
G+EAT+ +++ I+ +T++ E++ ++AG D KP A++
Sbjct: 622 GLEATQLIKSQDPNPPVIIAITAQALESDEVKALKAGCDDYLRKPYQAAQV 672
>gi|300717614|ref|YP_003742417.1| Capsular synthesis regulator component C [Erwinia billingiae Eb661]
gi|299063450|emb|CAX60570.1| Capsular synthesis regulator component C [Erwinia billingiae Eb661]
Length = 949
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 1/115 (0%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E+ + N LVVDD P+ R + S L S+G++V+ A++G +A+++ + IV
Sbjct: 817 EDKRASNEDILILVVDDHPINRMLLSDQLGSLGYRVKTAQDGVDALNVLSRN-EIDIVLT 875
Query: 78 DMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ M+AG+D C +KP+TM
Sbjct: 876 DVNMPNMDGYRLTQRLRQLGLTFPVVGVTANALAEEKQRCMEAGMDNCLSKPVTM 930
>gi|209527277|ref|ZP_03275787.1| multi-sensor hybrid histidine kinase [Arthrospira maxima CS-328]
gi|209492265|gb|EDZ92610.1| multi-sensor hybrid histidine kinase [Arthrospira maxima CS-328]
Length = 1051
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 76/120 (63%), Gaps = 6/120 (5%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D+P+ R + + +L+ VGF+V+ AENG+EA+ +++ H++F+DM MPV+DG
Sbjct: 829 YRILVVEDNPVNRLLLTTLLQDVGFEVQEAENGQEAIAVWQQWHP-HLIFMDMHMPVIDG 887
Query: 87 IEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
EAT+ ++ +V+S I+ +T+ +R+ + AG D +KP ++ LE L K
Sbjct: 888 FEATQYIKQAEVDSLPVIIAITASAFTEQRQNCINAGCDDFISKPFRREQV---LETLTK 944
>gi|389843015|ref|YP_006345095.1| signal transduction histidine kinase [Mesotoga prima MesG1.Ag.4.2]
gi|387857761|gb|AFK05852.1| signal transduction histidine kinase [Mesotoga prima MesG1.Ag.4.2]
Length = 935
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 72/120 (60%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P N Y L+ +D+ + + +L+ G+ V+VA NGK+A+++ R +++++ +DM
Sbjct: 687 PGQDNVKYRILLTEDNEANQLLIKEVLEKAGYSVDVAGNGKQAIEMVRNFNQYNLILMDM 746
Query: 80 EMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
+MP+MDG EATKA+R + IV +T+ + + E ++AG D KP+ + ++ ++
Sbjct: 747 QMPIMDGYEATKALRQEGYKIPIVALTAHTMQGDEEKTIEAGCDGFLGKPVRQSDLLEIV 806
>gi|288941215|ref|YP_003443455.1| PAS/PAC sensor hybrid histidine kinase [Allochromatium vinosum DSM
180]
gi|288896587|gb|ADC62423.1| PAS/PAC sensor hybrid histidine kinase [Allochromatium vinosum DSM
180]
Length = 905
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 44/138 (31%), Positives = 82/138 (59%), Gaps = 4/138 (2%)
Query: 6 EGASSSKKARISENPVSKNRPYFA--LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
+GA+ S+ A++ + R A L+V+DDP+ + + +L + G V+VA+NG+ A+
Sbjct: 760 DGAARSEHAQLQPERLIAQRHQGARLLLVEDDPINQEVALQLLSTTGLIVDVADNGRHAL 819
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAM--KVESKIVGVTSRNSETEREVFMQAG 121
+ R + +V +DM+MPVMDG+EAT+A+R + + I+ +T+ E +R+ ++AG
Sbjct: 820 ECLRARDDYALVLMDMQMPVMDGLEATRAIRLLPGRAALPILAMTANAFEGDRQRCLEAG 879
Query: 122 LDLCYTKPLTMAKIVPLL 139
++ KP+ K+ L
Sbjct: 880 MNDHLGKPVEPRKLYEAL 897
>gi|379722572|ref|YP_005314703.1| PAS/PAC sensor hybrid histidine kinase [Paenibacillus mucilaginosus
3016]
gi|386725338|ref|YP_006191664.1| PAS/PAC sensor hybrid histidine kinase [Paenibacillus mucilaginosus
K02]
gi|378571244|gb|AFC31554.1| PAS/PAC sensor hybrid histidine kinase [Paenibacillus mucilaginosus
3016]
gi|384092463|gb|AFH63899.1| PAS/PAC sensor hybrid histidine kinase [Paenibacillus mucilaginosus
K02]
Length = 639
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 74/116 (63%), Gaps = 4/116 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ + + +++ +G+ V V NG EAVD + A + ++F+D++MP+M+G+EA
Sbjct: 518 LIAEDNDINTLVLKRVIEKLGYSVTVVSNGAEAVDAAKRHA-YDLIFMDVQMPLMNGLEA 576
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TKA++AM E IV VT+ + +RE ++ AG+D +KP++M + ++E+
Sbjct: 577 TKAIKAMSAEGSCPYIVAVTAHAIKGDREKYLAAGMDEYISKPISMDAVSGIIEQF 632
>gi|444377397|ref|ZP_21176628.1| Signal transduction histidine kinase [Enterovibrio sp. AK16]
gi|443678478|gb|ELT85147.1| Signal transduction histidine kinase [Enterovibrio sp. AK16]
Length = 693
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 4/117 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMPVMDGIE 88
LV +D + + ++L+ G V VA NGKEAVDL G +F ++ +DM MPV+ GIE
Sbjct: 575 LVAEDSKANQMVAKLMLEKAGHHVVVANNGKEAVDLVHDGHVQFDMILMDMSMPVLCGIE 634
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
ATK +RA E I+ +T+ ++E M+AG+D TKP+ + V L + LQ++
Sbjct: 635 ATKQLRAEGYELPIIALTANAMNEDKERCMEAGMDDFVTKPI---RAVVLKQALQRH 688
>gi|428213852|ref|YP_007086996.1| PAS domain-containing protein [Oscillatoria acuminata PCC 6304]
gi|428002233|gb|AFY83076.1| PAS domain S-box [Oscillatoria acuminata PCC 6304]
Length = 1828
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 3/122 (2%)
Query: 11 SKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA 70
+K+ ++ P ++ LVVDD R + ILKS+GF+V+ AENG+ A+ ++++
Sbjct: 1601 TKRRAVAIAPQAQANESRILVVDDAFESRLLLKTILKSLGFQVQEAENGQGAIAVYQSW- 1659
Query: 71 KFHIVFIDMEMPVMDGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTK 128
K H++ +DM+MPVMDG EAT+ ++ A ++ IV +T+ E ER++ + AG D K
Sbjct: 1660 KPHLILMDMQMPVMDGYEATRHIKSTAQGQKTTIVALTASAFEEERKMILDAGCDDFIRK 1719
Query: 129 PL 130
P
Sbjct: 1720 PF 1721
>gi|381158920|ref|ZP_09868153.1| PAS domain S-box [Thiorhodovibrio sp. 970]
gi|380880278|gb|EIC22369.1| PAS domain S-box [Thiorhodovibrio sp. 970]
Length = 811
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+P ++ SM+L +G +V+ A NG++A+D R+ A F +VF+D MP MDG+EA
Sbjct: 690 LVVDDEPTNTKVLSMMLNRLGHQVQTAANGRQALDRLRSQA-FDLVFMDASMPEMDGLEA 748
Query: 90 TKAMR-----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +R + IV +T+ + +RE F+ AG+D +KP+
Sbjct: 749 TRHIRDNQDGDLDPSVPIVALTAHAMKGDRERFLAAGMDDYLSKPV 794
>gi|298529315|ref|ZP_07016718.1| multi-sensor hybrid histidine kinase [Desulfonatronospira
thiodismutans ASO3-1]
gi|298510751|gb|EFI34654.1| multi-sensor hybrid histidine kinase [Desulfonatronospira
thiodismutans ASO3-1]
Length = 806
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 81/139 (58%), Gaps = 9/139 (6%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
S + ++ SE +S R L+V+DDP R +L+ G V+ A+NG +AV+ F
Sbjct: 670 SRQEDSQDSEKALSGLR---ILLVEDDPANRFAMQKLLQKSGHHVQTAQNGSQAVEAF-A 725
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFMQAGLD 123
+ F +F+D+ MPVMDG++AT+ +R+M+ + I+ +T+ +RE F+++G+D
Sbjct: 726 HSHFDCIFMDIHMPVMDGVQATRKIRSMQDSGIAPKVPIIALTAYTLNGDREKFLESGMD 785
Query: 124 LCYTKPLTMAKIVPLLEEL 142
KP+ M I +L++L
Sbjct: 786 EYLGKPVQMQDIENVLKKL 804
>gi|346972494|gb|EGY15946.1| autoinducer 2 sensor kinase/phosphatase luxQ [Verticillium dahliae
VdLs.17]
Length = 1181
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT----GAKFHIVFI 77
+K +P L+VDD+P+ ++ + +++ + A NG EAV+L+ G F +VF+
Sbjct: 1032 TKQKPLHLLLVDDNPINIKLLTTVVRKMNHTFSTASNGLEAVELYEKSLVEGRPFDLVFM 1091
Query: 78 DMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MPVM+G EAT+ +R ++ KIV +T +S ++R+ + +G D+ TKP+ +
Sbjct: 1092 DISMPVMNGFEATREIRRLEGRAGAARCKIVVLTGLSSASDRKEAVASGSDMFLTKPVKL 1151
Query: 133 AKIVPLLEE 141
K+ +L++
Sbjct: 1152 GKVREVLDQ 1160
>gi|376296933|ref|YP_005168163.1| multi-sensor hybrid histidine kinase [Desulfovibrio desulfuricans
ND132]
gi|323459495|gb|EGB15360.1| multi-sensor hybrid histidine kinase [Desulfovibrio desulfuricans
ND132]
Length = 813
Score = 77.8 bits (190), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
+E PV P L+ DD+P+ R + + +L G +V +NG EA++ R A F +V
Sbjct: 543 AETPVPSLAPLNVLLADDNPLNRELATTLLSERGHRVLAVKNGIEALNALRE-APFDLVL 601
Query: 77 IDMEMPVMDGIEATKAMR-----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
+D++MP+MDG+ AT+A+R A+ I+ +T+ + +RE F+ AG++ KP+
Sbjct: 602 MDVQMPIMDGVSATRAIRDPNSGALNPNVPIIALTAHALKGDRERFLDAGMNDYIAKPIK 661
Query: 132 M 132
M
Sbjct: 662 M 662
>gi|375104143|ref|ZP_09750404.1| signal transduction histidine kinase [Burkholderiales bacterium
JOSHI_001]
gi|374664874|gb|EHR69659.1| signal transduction histidine kinase [Burkholderiales bacterium
JOSHI_001]
Length = 959
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 75/118 (63%), Gaps = 3/118 (2%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
R ALV +D+ + R + +L ++G ++AENG+EAVD+ A + ++ +DM+MP M
Sbjct: 837 RSVRALVAEDNAVNREVALELLAALGVPADLAENGREAVDMAAARA-YDLILMDMQMPEM 895
Query: 85 DGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
DG++AT+A+R + V ++ IV +T+ +R +QAG+D KP+ +A++ +L+
Sbjct: 896 DGLQATRAIRQLAVHARTPIVAMTANAFAEDRAACLQAGMDDHIAKPVEVAELQRVLD 953
>gi|397164689|ref|ZP_10488144.1| sensor kinase protein RcsC [Enterobacter radicincitans DSM 16656]
gi|396093837|gb|EJI91392.1| sensor kinase protein RcsC [Enterobacter radicincitans DSM 16656]
Length = 948
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 77/127 (60%), Gaps = 2/127 (1%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E +S+ +A I +N VS+N LVVDD P+ RR+ + L S+G++ + A +G +A+++
Sbjct: 805 EPQASATQA-IEDNEVSRNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNV 863
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLC 125
+ IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C
Sbjct: 864 L-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSC 922
Query: 126 YTKPLTM 132
+KP+T+
Sbjct: 923 LSKPVTL 929
>gi|261415659|ref|YP_003249342.1| histidine kinase [Fibrobacter succinogenes subsp. succinogenes S85]
gi|385790567|ref|YP_005821690.1| sensory box histidine kinase/response regulator [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261372115|gb|ACX74860.1| histidine kinase [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302326073|gb|ADL25274.1| sensory box histidine kinase/response regulator [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 1260
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 73/121 (60%), Gaps = 6/121 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG--AKFHIVFIDMEMPVMDGI 87
L+V+D+ M R+I +L+ GF+V AENG+EAV+L R ++ IV +D++MPVMDG
Sbjct: 1139 LLVEDNEMNRQIACDLLEDNGFEVFTAENGEEAVELVRQSVPGQYDIVLMDVQMPVMDGY 1198
Query: 88 EATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
AT+A+R + + I+ +T+ E +R+ + AG+D +KP+ K+ +L
Sbjct: 1199 AATRAIRVLPAGYQSRIPIIAMTANAFEEDRKAALDAGMDEHISKPINFDKMKYILSRFL 1258
Query: 144 K 144
K
Sbjct: 1259 K 1259
>gi|398850944|ref|ZP_10607639.1| signal transduction histidine kinase [Pseudomonas sp. GM80]
gi|398247792|gb|EJN33227.1| signal transduction histidine kinase [Pseudomonas sp. GM80]
Length = 1214
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 6/115 (5%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P LVVDD P R + L+ +G + VAENG +DL+R G +F +V +D MP+M+
Sbjct: 967 PLNVLVVDDHPANRLLMCQQLEFLGHRFSVAENGSSGLDLWRDG-QFDLVIVDCNMPLMN 1025
Query: 86 GIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
G E T+A+R +++++ ++G T+ E + QAG+D C KPL+++++
Sbjct: 1026 GYELTRAIRQHELQNRRTPCVVLGFTANAQPEEIQRCKQAGMDDCLFKPLSLSQL 1080
>gi|449136763|ref|ZP_21772130.1| multi-sensor hybrid histidine kinase [Rhodopirellula europaea 6C]
gi|448884598|gb|EMB15083.1| multi-sensor hybrid histidine kinase [Rhodopirellula europaea 6C]
Length = 993
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR----TGAKFHIVFIDMEMPVMD 85
LVVDD RR+ ++LK G V AENG+EA+D+ +G + +V +DM+MPV+D
Sbjct: 585 LVVDDGEANRRLIELVLKRAGATVMSAENGQEALDMIAEGNDSGCPYELVLMDMQMPVLD 644
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
G AT+ +R + + ++ +T +RE M AG D TKP+ + +++ ++ +
Sbjct: 645 GYSATRLLREREDTTPVIALTGNAMRGDREKCMDAGCDDFLTKPVNLDELLEMVSQ 700
>gi|427720168|ref|YP_007068162.1| multi-sensor hybrid histidine kinase [Calothrix sp. PCC 7507]
gi|427352604|gb|AFY35328.1| multi-sensor hybrid histidine kinase [Calothrix sp. PCC 7507]
Length = 1924
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVVDD R + +L SVGF V+ A NG+EA+ + T H++F+DM MPVMDG
Sbjct: 1708 YRILVVDDARDSRTLLVKLLTSVGFAVQEASNGQEAIAQWTTWQP-HLIFMDMRMPVMDG 1766
Query: 87 IEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
EATK ++A S I+ +T+ E +RE M+AG D KP
Sbjct: 1767 YEATKVIKAHPQSSISRTIIIALTANVFEEQREAMMKAGCDDLINKPF 1814
Score = 36.2 bits (82), Expect = 4.7, Method: Composition-based stats.
Identities = 31/128 (24%), Positives = 61/128 (47%), Gaps = 6/128 (4%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+ NP N+ L+VDD +I S L G+ V +G AV+ R ++
Sbjct: 1 MDSNPEQANKATI-LIVDDTLANLQILSATLSVTGYAVRGVSSGLMAVNEARLSLP-DLI 58
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESKI--VGVTSRNSETER-EVFMQAGLDLCYTKPLTM 132
+D++MP +DG E + ++A ++ I + +++ ++ + F G+D TKP +
Sbjct: 59 LLDIKMPEIDGYEVCQRLKADEITRDIPVIFLSALQDVFDKVKAFKSGGVDYI-TKPFQV 117
Query: 133 AKIVPLLE 140
++ +E
Sbjct: 118 EEVFARVE 125
>gi|32470753|ref|NP_863746.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1]
gi|32442898|emb|CAD71417.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1]
Length = 993
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
LVVDD RR+ ++LK G V AENG+EA+D+ +G + +V +DM+MPV+D
Sbjct: 585 LVVDDGEANRRLIELVLKRAGATVMSAENGQEALDMIAEGNESGYPYELVLMDMQMPVLD 644
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
G AT+ +R + + ++ +T +RE M AG D TKP+ + +++ ++ +
Sbjct: 645 GYSATRLLREREDTTPVIALTGNAMRGDREKCMDAGCDDFLTKPVNLDELLEMVSQ 700
>gi|270262775|ref|ZP_06191046.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
gi|270043459|gb|EFA16552.1| transcriptional regulatory protein [Serratia odorifera 4Rx13]
Length = 956
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ S L S+G++V A +G +A+D+ IV D+ MP MDG
Sbjct: 831 LVVDDHPINRRLLSDQLGSLGYQVVTANDGLDALDVLNRNT-VDIVLTDVNMPNMDGYHL 889
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R S ++GVT+ E++ M+AG+D C +KP+T+
Sbjct: 890 TQRLRQQHFTSPVIGVTANALAEEKQRCMEAGMDNCLSKPVTL 932
>gi|417301278|ref|ZP_12088439.1| multi-sensor hybrid histidine kinase [Rhodopirellula baltica WH47]
gi|327542393|gb|EGF28876.1| multi-sensor hybrid histidine kinase [Rhodopirellula baltica WH47]
Length = 993
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
LVVDD RR+ ++LK G V AENG+EA+D+ +G + +V +DM+MPV+D
Sbjct: 585 LVVDDGEANRRLIELVLKRAGATVMSAENGQEALDMIAEGNESGYPYELVLMDMQMPVLD 644
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
G AT+ +R + + ++ +T +RE M AG D TKP+ + +++ ++ +
Sbjct: 645 GYSATRLLREREDTTPVIALTGNAMRGDREKCMDAGCDDFLTKPVNLDELLEMVSQ 700
>gi|296121601|ref|YP_003629379.1| PAS sensor protein [Planctomyces limnophilus DSM 3776]
gi|296013941|gb|ADG67180.1| PAS sensor protein [Planctomyces limnophilus DSM 3776]
Length = 803
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/144 (31%), Positives = 81/144 (56%), Gaps = 11/144 (7%)
Query: 9 SSSKKARISENPVSKNRPYFA-------LVVDDDPMIRRIHSMILKSVGFKVEVAENG-- 59
SSS + SE+P ++ A L+ +D P +++ S+IL+ G +V V ENG
Sbjct: 638 SSSAVSTTSESPAPQSIATTAPLQNLRILLAEDGPDNQKLISLILRKAGAEVMVVENGEL 697
Query: 60 --KEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVF 117
++A+D R+ + F ++ +DM+MPV+DG +A+ +RA + IV +T+ ++RE
Sbjct: 698 AFQQAMDAQRSASGFDVILMDMQMPVLDGYQASAKLRAAGYRAPIVALTAHAMSSDREKC 757
Query: 118 MQAGLDLCYTKPLTMAKIVPLLEE 141
+ AG TKP+ +++ L+ E
Sbjct: 758 LAAGCSDYTTKPINKVRLIQLILE 781
>gi|421615132|ref|ZP_16056165.1| multi-sensor hybrid histidine kinase [Rhodopirellula baltica SH28]
gi|408494040|gb|EKJ98665.1| multi-sensor hybrid histidine kinase [Rhodopirellula baltica SH28]
Length = 993
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
LVVDD RR+ ++LK G V AENG+EA+D+ +G + +V +DM+MPV+D
Sbjct: 585 LVVDDGEANRRLIELVLKRAGATVMSAENGQEALDMIAEGNESGYPYELVLMDMQMPVLD 644
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
G AT+ +R + + ++ +T +RE M AG D TKP+ + +++ ++ +
Sbjct: 645 GYSATRLLREREDTTPVIALTGNAMRGDREKCMDAGCDDFLTKPVNLDELLEMVSQ 700
>gi|409992232|ref|ZP_11275434.1| multi-sensor hybrid histidine kinase [Arthrospira platensis str.
Paraca]
gi|409936896|gb|EKN78358.1| multi-sensor hybrid histidine kinase [Arthrospira platensis str.
Paraca]
Length = 1047
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 75/120 (62%), Gaps = 6/120 (5%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D+P+ R + + +L+ VGF+V AENG+EA+ L++ H++F+DM MPV+DG
Sbjct: 829 YRILVVEDNPVNRLLLTTLLQDVGFEVREAENGQEAIALWQQWHP-HLIFMDMHMPVIDG 887
Query: 87 IEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
EAT+ ++ +V++ +V +T+ +R+ + AG D +KP ++ LE L K
Sbjct: 888 FEATQYIKQSEVDAIPVVVAITASAFTEQRQNCIDAGCDDFISKPFRREQV---LETLTK 944
>gi|406695787|gb|EKC99087.1| two-component sensor molecule [Trichosporon asahii var. asahii CBS
8904]
Length = 771
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 8 ASSSKKARISENP-VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
AS+S + + P +S + LVVDDD + R + ++ +G +V +A NG EA+ +
Sbjct: 628 ASASIRRAVRHVPRLSSSIGLNTLVVDDDELTRDLMMRTVRRLGHQVILARNGMEALRVL 687
Query: 67 RT----GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
+ G IVF+D +MP M G+E +A+RA++ + IVG T + +++ + QAG
Sbjct: 688 KAAYEDGNPIDIVFLDNQMPAMSGVETARAIRALQWDVYIVGCTGNALQEDQDEYKQAGA 747
Query: 123 DLCYTKPLTMAKI 135
D TKP+++A I
Sbjct: 748 DAIVTKPVSVAAI 760
>gi|333928303|ref|YP_004501882.1| integral membrane sensor hybrid histidine kinase [Serratia sp.
AS12]
gi|333933256|ref|YP_004506834.1| integral membrane sensor hybrid histidine kinase [Serratia
plymuthica AS9]
gi|386330126|ref|YP_006026296.1| integral membrane sensor hybrid histidine kinase [Serratia sp.
AS13]
gi|333474863|gb|AEF46573.1| integral membrane sensor hybrid histidine kinase [Serratia
plymuthica AS9]
gi|333492363|gb|AEF51525.1| integral membrane sensor hybrid histidine kinase [Serratia sp.
AS12]
gi|333962459|gb|AEG29232.1| integral membrane sensor hybrid histidine kinase [Serratia sp.
AS13]
Length = 956
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ S L S+G++V A +G +A+D+ IV D+ MP MDG
Sbjct: 831 LVVDDHPINRRLLSDQLGSLGYQVVTANDGLDALDVLNRNT-VDIVLTDVNMPNMDGYHL 889
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R S ++GVT+ E++ M+AG+D C +KP+T+
Sbjct: 890 TQRLRQQHFTSPVIGVTANALAEEKQRCMEAGMDNCLSKPVTL 932
>gi|238897326|ref|YP_002923003.1| hybrid sensory histidine kinase in two-component regulatory system
with EvgA, regulates multidrug resistance [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
gi|229465081|gb|ACQ66855.1| hybrid sensory histidine kinase in two-component regulatory system
with EvgA, regulates multidrug resistance [Candidatus
Hamiltonella defensa 5AT (Acyrthosiphon pisum)]
Length = 1209
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/135 (37%), Positives = 77/135 (57%), Gaps = 3/135 (2%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
+ +K ISEN V K+ LVVDD P R + L +G +V VAENG +A++L++
Sbjct: 949 AKEEKQLISEN-VQKSFSLRILVVDDHPANRLLLKSQLTRLGHQVVVAENGVQALELWKN 1007
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMR-AMKVESKIVGVTSRNSETEREVFMQAGLDLCYT 127
F +V D MPVMDG T+ +R A K I+G+T+ E E+ ++ AG+D C
Sbjct: 1008 DV-FDVVITDCSMPVMDGPTLTRHLREASKGPLIILGLTAHAREEEKVAYLAAGMDDCLF 1066
Query: 128 KPLTMAKIVPLLEEL 142
KPL ++++ L +L
Sbjct: 1067 KPLRLSQLDAWLNKL 1081
>gi|345563876|gb|EGX46859.1| hypothetical protein AOL_s00097g285 [Arthrobotrys oligospora ATCC
24927]
Length = 1189
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 53/145 (36%), Positives = 82/145 (56%), Gaps = 16/145 (11%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
A+ SSK+ R+ + Y LVV+D+ + ++I L + G + A NG+EA++
Sbjct: 1029 ADRKPSSKRPRLGDG-------YRVLVVEDNILNQKILRKQLAAQGCETVTANNGEEALE 1081
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES----KIVGVTSRNSETEREVFM-Q 119
L + G KF IV +DMEMPVMDG AT +R + + I+G TS N+ E+ FM
Sbjct: 1082 LLKAGGKFTIVLMDMEMPVMDGATATGLIREYEAGAGGHVPIIG-TSANARFEQVQFMIN 1140
Query: 120 AGLDLCYTKPLTMAKIVPLLEELQK 144
AG+D TKP I+ L+E++++
Sbjct: 1141 AGMDDVITKPFL---ILDLMEKIRQ 1162
>gi|442319645|ref|YP_007359666.1| sensory box histidine kinase/response regulator [Myxococcus
stipitatus DSM 14675]
gi|441487287|gb|AGC43982.1| sensory box histidine kinase/response regulator [Myxococcus
stipitatus DSM 14675]
Length = 925
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/121 (33%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L+V+D+P +R+ S++L +G++V+ A NG+EA++ + +F +V +D++MP MD
Sbjct: 650 PLRILLVEDNPTNQRLASLLLDRLGYQVQAASNGREALE-WSMRQRFDVVLMDLQMPEMD 708
Query: 86 GIEATKAMR---AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
G+EAT+ +R KV+ +V +T+ +++RE +AG+D KP+ + + L
Sbjct: 709 GLEATRRLRRELPPKVQPWVVAMTANAMDSDREQCFEAGMDDFLAKPIRVEALTAALVRC 768
Query: 143 Q 143
Q
Sbjct: 769 Q 769
Score = 42.7 bits (99), Expect = 0.048, Method: Composition-based stats.
Identities = 22/57 (38%), Positives = 36/57 (63%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
L+VDD+ + RR+ L++ G + A +G EA+ + GA+F +V ID +MP +DG
Sbjct: 510 LIVDDNAINRRLLGRQLQTWGAEPVEAGSGMEALAKLQPGARFDLVLIDQQMPGLDG 566
>gi|218779594|ref|YP_002430912.1| Hpt sensor hybrid histidine kinase [Desulfatibacillum alkenivorans
AK-01]
gi|218760978|gb|ACL03444.1| Hpt sensor hybrid histidine kinase [Desulfatibacillum alkenivorans
AK-01]
Length = 1102
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 65/106 (61%), Gaps = 5/106 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ DD+ + +++ S L +G V VA NGKEA+D G ++ ++ +D +MP+MDG+EA
Sbjct: 824 LLADDNDINQKVASTNLIKMGHSVVVANNGKEALDAIVKGEQYDLILMDGQMPIMDGMEA 883
Query: 90 TKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +R + K IV +T+ +RE F++AG+D TKPL
Sbjct: 884 TRKIRRFEAAHKVKRTPIVALTAHAMTGDREKFIEAGMDDYLTKPL 929
>gi|400287033|ref|ZP_10789065.1| PAS/PAC sensor hybrid histidine kinase [Psychrobacter sp. PAMC
21119]
Length = 950
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGIE 88
LVV+D P ++I IL +G++ VAE+G++A+ + K ++ +D MPVMDG++
Sbjct: 834 LVVEDSPTNQKIVCKILTKLGYRTVVAEDGQQALSQLQAQHKEIALILMDCRMPVMDGLQ 893
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
AT+A+RA + IV +T+ NS +R+ G+D TKP+ K+ +L+ L KN
Sbjct: 894 ATQAIRAQGSDIPIVALTANNSTEDRDACFAVGMDEFLTKPINKNKLQTVLQSLIKN 950
>gi|376003259|ref|ZP_09781073.1| putative two-component hybrid sensor and regulator, histidine
kinase [Arthrospira sp. PCC 8005]
gi|375328419|emb|CCE16826.1| putative two-component hybrid sensor and regulator, histidine
kinase [Arthrospira sp. PCC 8005]
Length = 1051
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 75/120 (62%), Gaps = 6/120 (5%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D+P+ R + + +L+ VGF+V+ AENG+EA+ +++ H++F+DM MPV+DG
Sbjct: 829 YRILVVEDNPVNRLLLTTLLQDVGFEVQEAENGQEAIAIWQQWHP-HLIFMDMHMPVIDG 887
Query: 87 IEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
EAT+ ++ +V++ IV +T+ +R + AG D +KP ++ LE L K
Sbjct: 888 FEATQYIKQAEVDTIPVIVAITASAFTEQRRNCINAGCDDFISKPFRREQV---LETLTK 944
>gi|389738525|gb|EIM79723.1| hypothetical protein STEHIDRAFT_126395 [Stereum hirsutum FP-91666
SS1]
Length = 1167
Score = 77.0 bits (188), Expect = 3e-12, Method: Composition-based stats.
Identities = 55/157 (35%), Positives = 86/157 (54%), Gaps = 17/157 (10%)
Query: 4 GAEG---ASSSKKARISENPVSKN----------RPYFALVVDDDPMIRRIHSMILKSVG 50
G EG A S+ A +S PVS+ P LVVDDDPM R + + +L +G
Sbjct: 985 GPEGMGKAWSAPAASLSPTPVSQTAPASSSGEEGNPLVVLVVDDDPMTRTLMTRMLTKLG 1044
Query: 51 FKVEVAENGKEAVDL-FRTGA-KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSR 108
V+ A++G++ +D+ GA K+ +V +D MPVM G +A + +RA +VG T
Sbjct: 1045 CVVDTADDGQQFLDIILAEGARKYDLVSLDNYMPVMTGEDAVRELRARGRMDLVVGCTG- 1103
Query: 109 NSETEREV-FMQAGLDLCYTKPLTMAKIVPLLEELQK 144
N+ TE ++ +M+AG D TKP+ M + +L+ +K
Sbjct: 1104 NALTEDQLNYMEAGADKVLTKPIMMKDLKDVLQVAKK 1140
>gi|262171514|ref|ZP_06039192.1| signal transduction histidine kinase [Vibrio mimicus MB-451]
gi|261892590|gb|EEY38576.1| signal transduction histidine kinase [Vibrio mimicus MB-451]
Length = 573
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
A + +N ++KN + LVV+D + + ++L +G+ V +AENG EA++L F
Sbjct: 441 AYLKQNTIAKN--HHILVVEDTKTNQMVIQLLLNKMGYDVTIAENGLEAIELLEKSNAFD 498
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+V +D+ MP+MDGI AT+ +R+ ++ I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 LVLMDISMPIMDGIMATRKIRSQDIDIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRGK 558
Query: 134 KIVPLLEELQKN 145
I+ ++ N
Sbjct: 559 DIMNVVNRFLPN 570
>gi|258623303|ref|ZP_05718309.1| Autoinducer 2 sensor kinase/phosphatase luxQ [Vibrio mimicus VM573]
gi|424809727|ref|ZP_18235100.1| sensor histidine kinase/response regulator [Vibrio mimicus SX-4]
gi|258584435|gb|EEW09178.1| Autoinducer 2 sensor kinase/phosphatase luxQ [Vibrio mimicus VM573]
gi|342322824|gb|EGU18611.1| sensor histidine kinase/response regulator [Vibrio mimicus SX-4]
Length = 573
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/132 (28%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
A + +N ++KN + LVV+D + + ++L +G+ V +AENG EA++L F
Sbjct: 441 AYLKQNTIAKN--HHILVVEDTKTNQMVIQLLLNKMGYDVTIAENGLEAIELLEKSNAFD 498
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+V +D+ MP+MDGI AT+ +R+ ++ I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 LVLMDISMPIMDGIMATRKIRSQDIDIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRGK 558
Query: 134 KIVPLLEELQKN 145
I+ ++ N
Sbjct: 559 DIMNVVNRFLPN 570
>gi|226939943|ref|YP_002795016.1| Sensor protein [Laribacter hongkongensis HLHK9]
gi|226714869|gb|ACO74007.1| Sensor protein [Laribacter hongkongensis HLHK9]
Length = 1205
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 72/114 (63%), Gaps = 5/114 (4%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L+V+D+P+ +R+ S +L+ +G V +A NG+EAVD + +F ++ +D++MP MD
Sbjct: 953 PLRVLLVEDNPVNQRLASRLLEKLGHGVTLASNGQEAVDWYGR-EQFDMIMMDVQMPFMD 1011
Query: 86 GIEATKAMRAMKV----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
G EAT A+RA+++ I+ +T+ +RE ++AG+D KP+ + ++
Sbjct: 1012 GFEATSAIRALELGGSRRQPIIAMTAHAMRGDRERCLEAGMDGYVPKPIMLDEL 1065
Score = 42.0 bits (97), Expect = 0.080, Method: Composition-based stats.
Identities = 37/128 (28%), Positives = 62/128 (48%), Gaps = 10/128 (7%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF-----HI 74
PVS LVVDD P RR+ L+ G + V E G A+ + GA+ +
Sbjct: 798 PVSALYGVPVLVVDDHPTNRRLMYDTLRQFGARPVVTEGGMSALQ-YLHGAQLRGELPQL 856
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESKI--VGVTSR-NSETEREVFMQAGLDLCYTKPLT 131
ID EMP M G+E + M+ I + +TS+ + + E+ +Q G+ C KP+
Sbjct: 857 ALIDGEMPQMSGMELMRYMQHQAAWRDIACIMLTSQWDPAMQGELRLQ-GVVHCLQKPVE 915
Query: 132 MAKIVPLL 139
++++ ++
Sbjct: 916 ASRLLRVM 923
>gi|424031780|ref|ZP_17771214.1| response regulator [Vibrio cholerae HENC-01]
gi|408877501|gb|EKM16567.1| response regulator [Vibrio cholerae HENC-01]
Length = 1053
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 79/143 (55%), Gaps = 9/143 (6%)
Query: 7 GASSSKKARISENPVSKN----RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
G S+ K + P S N R L+V+D+ + +++ S++L G++ E+AENG+ A
Sbjct: 908 GISAKSKPQDKPEPTSINTLPSRSERILLVEDNTVNQKVASLLLSKAGYQFEIAENGQIA 967
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVF 117
VD+F+ F I+ +D MPVMDG EATK +RA + S I+ +T+ + + +
Sbjct: 968 VDMFQQDNGFDIILMDCMMPVMDGFEATKEIRAYEKNSGLPKTPIIALTASVVDDDIQRC 1027
Query: 118 MQAGLDLCYTKPLTMAKIVPLLE 140
+G+D KP+ K++ +E
Sbjct: 1028 YDSGMDAYVPKPVRKEKLLHQIE 1050
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 16/127 (12%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + ++I + + GF ++A NG EAV++F+ ++ ++ +D MPVMDG EA
Sbjct: 773 LVVDDNTVNQKIAGLHVAKAGFTFDLAANGLEAVEMFKKN-QYSLILMDCMMPVMDGFEA 831
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKP---------LTMAK 134
T+ +R ++ E I+ +T+ + + + G+D KP L A
Sbjct: 832 TQKIRQLEHEQNRSVKIPIIALTASVVDDDIQKCFDVGMDDYVPKPFKANILKEKLAKAT 891
Query: 135 IVPLLEE 141
VP++E+
Sbjct: 892 AVPIVED 898
>gi|291569174|dbj|BAI91446.1| two-component hybrid sensor and regulator [Arthrospira platensis
NIES-39]
Length = 1009
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/120 (36%), Positives = 75/120 (62%), Gaps = 6/120 (5%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D+P+ R + + +L+ VGF+V AENG+EA+ L++ H++F+DM MPV+DG
Sbjct: 791 YRILVVEDNPVNRLLLTTLLQDVGFEVREAENGQEAIALWQQWHP-HLIFMDMHMPVIDG 849
Query: 87 IEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
EAT+ ++ +V++ +V +T+ +R+ + AG D +KP ++ LE L K
Sbjct: 850 FEATQYIKQSEVDAIPVVVAITASAFTEQRQNCIDAGCDDFISKPFRREQV---LETLTK 906
>gi|257058733|ref|YP_003136621.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 8802]
gi|256588899|gb|ACU99785.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 8802]
Length = 844
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 10/118 (8%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D P R++ +L+ +GF+V+ A+NG+EAV+L+ T H++++D+ +P+MDG
Sbjct: 630 YRLLVVEDHPTNRQVLVNLLEPIGFQVKTADNGQEAVELWETWHP-HLIWMDLHLPIMDG 688
Query: 87 IEATKAMRAMKVE--------SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
EAT+ ++A K+E +KI+ +T+ ER + G D TKP + I+
Sbjct: 689 YEATRQIKA-KMEKFPLDIYPTKIIALTASAFAQERSAMLALGCDDFVTKPFSEGIIL 745
>gi|255604428|ref|XP_002538224.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
gi|223513220|gb|EEF24160.1| two-component sensor protein histidine protein kinase, putative
[Ricinus communis]
Length = 294
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 74/125 (59%), Gaps = 5/125 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP L+ +D P + + +L+ G V +A NG EA+ ++ A+F ++ +D++MP M
Sbjct: 47 RPLHILLAEDHPTNQNLAIAVLQQRGHTVRLAANGHEALAWYQR-ARFDVILMDVQMPEM 105
Query: 85 DGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
DG+EAT A+RA++ +S +IV +T+ +RE ++AG+D KP +++ +E
Sbjct: 106 DGLEATAAIRALEQQSGQRVRIVALTAHVLSGDRERLLEAGMDDYLGKPFFPEQLLAAVE 165
Query: 141 ELQKN 145
L K+
Sbjct: 166 PLGKS 170
>gi|218245686|ref|YP_002371057.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 8801]
gi|218166164|gb|ACK64901.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 8801]
Length = 844
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 72/118 (61%), Gaps = 10/118 (8%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D P R++ +L+ +GF+V+ A+NG+EAV+L+ T H++++D+ +P+MDG
Sbjct: 630 YRLLVVEDHPTNRQVLVNLLEPIGFQVKTADNGQEAVELWETWHP-HLIWMDLHLPIMDG 688
Query: 87 IEATKAMRAMKVE--------SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
EAT+ ++A K+E +KI+ +T+ ER + G D TKP + I+
Sbjct: 689 YEATRQIKA-KMEKFPLDIYPTKIIALTASAFAQERSAMLALGCDDFVTKPFSEGIIL 745
>gi|401884302|gb|EJT48470.1| two-component sensor molecule [Trichosporon asahii var. asahii CBS
2479]
Length = 738
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 45/133 (33%), Positives = 76/133 (57%), Gaps = 5/133 (3%)
Query: 8 ASSSKKARISENP-VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
AS+S + + P +S + LVVDDD + R + ++ +G +V +A NG EA+ +
Sbjct: 595 ASASIRRAVRHVPRLSSSIGLNTLVVDDDELTRDLMMRTVRRLGHQVILARNGMEALRVL 654
Query: 67 RT----GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
+ G IVF+D +MP M G+E +A+RA++ + IVG T + +++ + QAG
Sbjct: 655 KAAYEDGNPIDIVFLDNQMPAMSGVETARAIRALQWDVYIVGCTGNALQEDQDEYKQAGA 714
Query: 123 DLCYTKPLTMAKI 135
D TKP+++A I
Sbjct: 715 DAIVTKPVSVAAI 727
>gi|262191140|ref|ZP_06049343.1| signal transduction histidine kinase [Vibrio cholerae CT 5369-93]
gi|262032975|gb|EEY51510.1| signal transduction histidine kinase [Vibrio cholerae CT 5369-93]
Length = 226
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 70/119 (58%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG++AV+L
Sbjct: 93 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGQQAVELLDRNHA 152
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 153 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPI 211
>gi|449548364|gb|EMD39331.1| histidine kinase [Ceriporiopsis subvermispora B]
Length = 1173
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 89/169 (52%), Gaps = 29/169 (17%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
A A S+ +A+ + S+ P LVVDDDP+ R++ S +L +G +V AENG+ A++
Sbjct: 952 ATSAGSTLQAQAANAWGSQESPLRVLVVDDDPLTRKLMSRMLTRLGCRVATAENGEIALE 1011
Query: 65 LF------------RTGA--------------KFHIVFIDMEMPVMDGIEATKAMRAMKV 98
L TG+ ++ ++F+D +MPV+ G++A +R M
Sbjct: 1012 LILGTGQRATPSSEDTGSAGLSLDGSASGDEYRYAVIFLDNQMPVLSGLDAVTKLREMGR 1071
Query: 99 ESKIVGVTSRNSETEREVFMQAGLDLCYTKPL---TMAKIVPLLEELQK 144
+VGVT T+++ +++AG D TKP+ ++ +++ + +E +K
Sbjct: 1072 HDFVVGVTGNALLTDQQEYLEAGADHVLTKPVLEKSLKRMLLIADERRK 1120
>gi|258626569|ref|ZP_05721405.1| Autoinducer 2 sensor kinase/phosphatase luxQ [Vibrio mimicus VM603]
gi|258581160|gb|EEW06073.1| Autoinducer 2 sensor kinase/phosphatase luxQ [Vibrio mimicus VM603]
Length = 573
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/137 (28%), Positives = 78/137 (56%), Gaps = 2/137 (1%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
S K + ++ ++KN Y LVV+D + + ++L +G+ V +AENG EA++L
Sbjct: 436 SKDKITYLQKSTIAKN--YHILVVEDTKTNQMVIQLLLNKMGYDVTIAENGLEAIELLEK 493
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTK 128
F +V +D+ MP+MDGI AT+ +R+ ++ I+ +T+ + ++++ + AG++ K
Sbjct: 494 SNAFDLVLMDISMPIMDGIMATRKIRSQDIDIPIIALTAHTAGSDKQNCIDAGMNDIVLK 553
Query: 129 PLTMAKIVPLLEELQKN 145
P+ I+ ++ N
Sbjct: 554 PIRGKDIMNVVNRFLPN 570
>gi|379011380|ref|YP_005269192.1| putative sensor protein [Acetobacterium woodii DSM 1030]
gi|375302169|gb|AFA48303.1| putative sensor protein [Acetobacterium woodii DSM 1030]
Length = 1012
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 81/138 (58%), Gaps = 4/138 (2%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
G + +K I N NR Y L+ +DD + + + S +LK G+ V++A NG +A ++
Sbjct: 756 GQAEEQKIEIIPNFEKINREYKILLTEDDKINQLVISRMLKECGYSVDIANNGFDAENMV 815
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCY 126
+ + I+ +D++MP MDG+EATK ++ + ++ +T+ + +RE F+ G+D
Sbjct: 816 KKN-NYDIILMDIQMPEMDGMEATKRIKKINKNVPVLAMTAYALQGDREKFLSLGMDGYI 874
Query: 127 TKPLTMAKIVPLLEELQK 144
+KP+ K+ L+EE++K
Sbjct: 875 SKPI---KVETLVEEIEK 889
>gi|374585041|ref|ZP_09658133.1| multi-sensor hybrid histidine kinase [Leptonema illini DSM 21528]
gi|373873902|gb|EHQ05896.1| multi-sensor hybrid histidine kinase [Leptonema illini DSM 21528]
Length = 967
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 71/116 (61%), Gaps = 3/116 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR-TGAKFHIVFIDMEMPVMDGIE 88
L+V+D+ + R+I +L +G V+ A NG EA+ L +G ++ VF+D+ MP+MDG+E
Sbjct: 726 LIVEDNEINRQILDELLCDMGLFVDTATNGLEAIALVEESGKRYEAVFMDLRMPLMDGLE 785
Query: 89 ATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
AT+ +R + ++ +T+ +E ER+ + AG++ KP MA+I +LE +
Sbjct: 786 ATRRLRKEHTADRLPVIAITATANEEERQECLDAGMNAVVMKPFDMAEIRSILERV 841
>gi|307129983|ref|YP_003881999.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Dickeya dadantii 3937]
gi|306527512|gb|ADM97442.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Dickeya dadantii 3937]
Length = 951
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
S+N LVVDD P+ RR+ + L S+G++V A +G +A+D+ I+ D+ M
Sbjct: 820 SENSDIRLLVVDDHPINRRLLADQLGSLGYQVITANDGLDALDVLAKNP-VDIILTDVNM 878
Query: 82 PVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
P MDG T+ +R M+ ++GVT+ ER+ +QAG+D C +KP+T+
Sbjct: 879 PNMDGYRFTQRLREMEQTLPVIGVTANALAEERQRCLQAGMDNCLSKPVTL 929
>gi|389875458|ref|YP_006373193.1| multi-sensor hybrid histidine kinase [Tistrella mobilis KA081020-065]
gi|388530413|gb|AFK55609.1| multi-sensor hybrid histidine kinase [Tistrella mobilis KA081020-065]
Length = 1592
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 69/114 (60%), Gaps = 6/114 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + + + S IL+ G++V V ENG EA++ R F +VF+D++MPVMDG+EA
Sbjct: 1319 LLVEDNTVNQAVASTILEKQGYRVAVVENGAEAIEACRAD-DFDLVFMDVQMPVMDGMEA 1377
Query: 90 TKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
T+ +R + ES IV +T+ RE +M AG+D KP K++ +
Sbjct: 1378 TRRIRTAEAESGRPRTPIVAMTANAMAGMREEYMAAGMDDFVPKPFRAEKLLAM 1431
Score = 35.8 bits (81), Expect = 6.5, Method: Composition-based stats.
Identities = 31/118 (26%), Positives = 53/118 (44%), Gaps = 12/118 (10%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVM 84
AL+VDD P+ RR+ + L +G ++ A + E++ L +TG +V D+ + M
Sbjct: 1178 ALIVDDLPLNRRVLAHHLGELGMEISEATDVAESLHLLEKAAQTGTPVDLVVTDLNLGGM 1237
Query: 85 DGIEATKAMR---AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
DG +R + I+ +S S VF D TKP+ +++ L
Sbjct: 1238 DGAILGTWLRLHPRFQTVRTILAASSPPSAEAARVF-----DAVITKPIRRGELITAL 1290
>gi|218296276|ref|ZP_03497032.1| response regulator receiver modulated metal dependent
phosphohydrolase [Thermus aquaticus Y51MC23]
gi|218243348|gb|EED09878.1| response regulator receiver modulated metal dependent
phosphohydrolase [Thermus aquaticus Y51MC23]
Length = 315
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 68/109 (62%), Gaps = 7/109 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDDDP R + L+ +G +V A NG+EA+DLF+ +H+V D+ MP+MDG+E
Sbjct: 4 LLVDDDPFQRLLLMRALEPLGVEVSEARNGREALDLFKE-KPYHLVLTDLHMPLMDGLEL 62
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREV---FMQAGLDLCYTKPLTMAKI 135
T RA+K + ++ VT ++ E+EV +QAG D +P+ +A++
Sbjct: 63 T---RAIKAQDPLLPVTLLTADGEKEVKLKGLQAGADDFLNRPVDLAEL 108
>gi|39726391|gb|AAR30138.1| putative histidine kinase M3EDp [Gibberella moniliformis]
Length = 1226
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 79/148 (53%), Gaps = 18/148 (12%)
Query: 10 SSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR-- 67
SS+ R + P + + L+VDD+ + + +M +K GF E AENG+EAVD F+
Sbjct: 1078 SSQNTRKQKKPEMPGKAH-VLLVDDNKINLNLLTMFMKKCGFSYEEAENGEEAVDTFKRS 1136
Query: 68 ------TGA----KFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSET 112
GA F + +D+ MPVM+G+EATK +R ++ E K + +T S
Sbjct: 1137 TIGDAEQGAPVKKHFDYILMDISMPVMNGVEATKRIRKIEAEYKVPRTTVFALTGLASAD 1196
Query: 113 EREVFMQAGLDLCYTKPLTMAKIVPLLE 140
R+ M AG+DL KP+ A++ ++E
Sbjct: 1197 ARQDAMSAGVDLFLPKPVKFAELKTMIE 1224
>gi|310790422|gb|EFQ25955.1| hsp90-like protein [Glomerella graminicola M1.001]
Length = 1304
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/139 (31%), Positives = 78/139 (56%), Gaps = 6/139 (4%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
A S K + +P + P L+VDD+ + +I S +K + + A NG EA+ +
Sbjct: 1150 AKGSTKTSVPPSPETAKSPSEFLLVDDNAINLKILSAYMKRLQKRHTTASNGLEALQAYT 1209
Query: 68 TGA-KFHIVFIDMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFMQAG 121
T +F + ID+ MPVMDG+EAT+ +R + + ++ +TS S++ R+ +G
Sbjct: 1210 TQPQRFCCILIDITMPVMDGLEATRRIRKFERAQNLAPATVIAITSLGSQSARQEGFASG 1269
Query: 122 LDLCYTKPLTMAKIVPLLE 140
+DL T+P+TM ++V +L+
Sbjct: 1270 MDLFLTRPVTMKELVKILK 1288
>gi|262402142|ref|ZP_06078703.1| signal transduction histidine kinase [Vibrio sp. RC586]
gi|262350924|gb|EEZ00057.1| signal transduction histidine kinase [Vibrio sp. RC586]
Length = 569
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 75/125 (60%), Gaps = 1/125 (0%)
Query: 13 KARISENPVSK-NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K R++++ S R LVV+D + + ++L +G+ V +AENG+EA++L +
Sbjct: 437 KQRVADSEQSSVTRNQHILVVEDTKTNQMVIQLLLNKMGYDVTIAENGREAIELLEMNSI 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F ++ +D+ MP+MDGI ATK +R+ ++ I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLILMDISMPIMDGIAATKKIRSKNIDIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIV 136
IV
Sbjct: 557 GKDIV 561
>gi|445497405|ref|ZP_21464260.1| hybrid signal transduction histidine kinase J [Janthinobacterium sp.
HH01]
gi|444787400|gb|ELX08948.1| hybrid signal transduction histidine kinase J [Janthinobacterium sp.
HH01]
Length = 1020
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+P+ +++ IL+ G V V ENG+EA+ L R G + +V +D++MPVMDG A
Sbjct: 901 LLVEDNPINQQVARGILEQAGAVVAVGENGEEALKLLRDGLQCDLVLMDVQMPVMDGFTA 960
Query: 90 TKAMRA-MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+A+R +++ ++ +T+ E+ERE + AG+D KP+
Sbjct: 961 TRAIRGELRMTLPVIAMTAGVMESERERCIAAGMDDFIGKPV 1002
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 4/84 (4%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
+E P +R + LVVDD+P R +++ G+ ++ G EA+ L R+G + +
Sbjct: 751 AEAPKPAHRRHL-LVVDDNPTSRSYLGKTIQAWGWTCDIVATGTEALALLRSGRAYDVAL 809
Query: 77 IDMEMPVMDGIEATKAMRAMKVES 100
+D +MP MDG MRA++ ES
Sbjct: 810 VDWQMPDMDG---PATMRAVQQES 830
>gi|134078587|emb|CAK49115.1| unnamed protein product [Aspergillus niger]
Length = 677
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
EG + ++ R P S R L+V+D+ + +RI S L++ GF+V A NG+EAVD
Sbjct: 534 EGPQAPEEPR--SEPRSHPRERRILLVEDNVINKRILSRKLQTSGFQVSEASNGQEAVDA 591
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGL 122
+ +F V +D MP+MDG A++ +R + + I+GVT+ +++ + AG+
Sbjct: 592 IQQQGRFDCVLMDQVMPIMDGTTASRTIRQLDGPMAQVPILGVTANVRTAQKDEMLAAGM 651
Query: 123 DLCYTKPLTMAKIVPLLEELQK 144
+ KP M ++ +++LQ+
Sbjct: 652 NDIIYKPYKMPDLIERIKQLQQ 673
>gi|383789398|ref|YP_005473972.1| signal transduction histidine kinase [Spirochaeta africana DSM
8902]
gi|383105932|gb|AFG36265.1| signal transduction histidine kinase [Spirochaeta africana DSM
8902]
Length = 818
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/141 (32%), Positives = 78/141 (55%), Gaps = 7/141 (4%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMI-RRIHSMILKSVGFKVEVAENGKEAVDLF 66
ASS R S P P A+++ +D MI +R+ + +++ +G++ E+A G+EA+DL
Sbjct: 675 ASSPAVDRHSLTPDEVGTPKPAILIAEDDMINQRVIAHLVERLGYRTEMAATGQEAIDLL 734
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAG 121
G +F +V +D++MPV+DG +A + +R I+ VT+ E+E F+ AG
Sbjct: 735 SAG-EFALVLMDVQMPVLDGTDAARMIRTGAAGEHNRGIPIIAVTAHVQPEEQERFLAAG 793
Query: 122 LDLCYTKPLTMAKIVPLLEEL 142
+D TKPL + + EL
Sbjct: 794 MDAIQTKPLNAEALSQQIAEL 814
>gi|160937915|ref|ZP_02085273.1| hypothetical protein CLOBOL_02809 [Clostridium bolteae ATCC
BAA-613]
gi|158439141|gb|EDP16895.1| hypothetical protein CLOBOL_02809 [Clostridium bolteae ATCC
BAA-613]
Length = 960
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 80/141 (56%), Gaps = 13/141 (9%)
Query: 15 RISENPVSKNRPYFA----LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF--RT 68
R E K R F+ L+ DD+ + R I +L+ G +VE AE+G+EAV+L+ R
Sbjct: 822 RSEEKGAEKEREDFSGCRVLLADDNELNREIARTLLEMRGMEVETAEDGQEAVNLYKSRG 881
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDL 124
F V +D+ MP MDG+EAT+ +RAM+ E+ I+ +T+ E ++ +AG++
Sbjct: 882 AGYFSAVLMDIRMPRMDGLEATRTIRAMEDENTDRIPILAMTANAFEEDKARAYEAGMNG 941
Query: 125 CYTKPLTMAKIVPLLEELQKN 145
KPL M + L+EL+K+
Sbjct: 942 YLVKPLDMEAV---LDELKKH 959
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 56/106 (52%), Gaps = 5/106 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD----LFRTGAKFHIVFIDMEMPVMD 85
LVVDDDP++ + IL+ G + ++G AV+ L + I ID +MP MD
Sbjct: 702 LVVDDDPLVGSQATSILEKAGAQSLWVDSGFRAVEEVQRLLEENRHYDIAMIDWKMPDMD 761
Query: 86 GIEATKAMRAM-KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
G+E + +RA+ ++ I+ +++ + + AG++ +KPL
Sbjct: 762 GVETARRIRALVGPDTTIIMISAYDWSRIEDEARNAGVNCFISKPL 807
>gi|5921544|emb|CAB56474.1| putative histidine kinase [Pseudomonas stutzeri]
Length = 417
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 13 KARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF 72
+A + + PVS +RP L VDD+P + +L +G +V +G++A+++ + + F
Sbjct: 154 QALVEQVPVSDSRPPSVLCVDDNPANLMLLETLLTDMGGEVVAVSSGQQALEVVQQQS-F 212
Query: 73 HIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYT 127
+VF+D++MP MDG + T+A+R ++ES IV +T+ ER +Q+GLD T
Sbjct: 213 DMVFMDVQMPGMDGRQTTEAIRRWELESGQPPLPIVALTAHALSNERRSLLQSGLDDYLT 272
Query: 128 KPLT---MAKIV 136
KP++ +A++V
Sbjct: 273 KPISERQLAQVV 284
>gi|242238486|ref|YP_002986667.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Dickeya dadantii Ech703]
gi|242130543|gb|ACS84845.1| histidine kinase [Dickeya dadantii Ech703]
Length = 934
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/124 (37%), Positives = 70/124 (56%), Gaps = 8/124 (6%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
S+N LVVDD P+ RR+ + L S+G++V A +G +A+D+ IV D+ M
Sbjct: 801 SENGDIRILVVDDHPINRRLLADQLGSLGYQVITANDGLDALDVLSKNP-VDIVLTDVNM 859
Query: 82 PVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
P MDG T+ +R M ++GVT+ ER+ +QAG+D C +KP+T LE
Sbjct: 860 PNMDGYRFTQRLRDMAQTFPVIGVTANALAEERQRCLQAGMDNCLSKPVT-------LET 912
Query: 142 LQKN 145
LQ++
Sbjct: 913 LQQS 916
>gi|118579340|ref|YP_900590.1| multi-sensor hybrid histidine kinase [Pelobacter propionicus DSM
2379]
gi|118502050|gb|ABK98532.1| Hpt sensor hybrid histidine kinase [Pelobacter propionicus DSM
2379]
Length = 977
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 73/121 (60%), Gaps = 11/121 (9%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
AL+V+D+ + + + +L+ +G++V VA NG EA+DL + +F I+ +D +MPVMDG +
Sbjct: 691 ALLVEDNLVNQDVGREMLRFLGYEVTVASNGSEALDLLAS-RRFSIILMDCQMPVMDGYQ 749
Query: 89 ATKAMRAMKVES----------KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
TK +R + + ++ +T+ E +RE+ M+AG+D TKP T+ ++ +
Sbjct: 750 TTKELRLREKSAPGEGGGTPHQTVIALTAHAGEQDRELCMEAGMDDYLTKPYTLEQLTGI 809
Query: 139 L 139
L
Sbjct: 810 L 810
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 21/114 (18%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK---FHIVFIDMEMPVMDG 86
LVVDD+ R I I+ S G +++ A EA+ R + F + +DM MP MDG
Sbjct: 544 LVVDDNATNRTILEQIILSWGMRIKTASCALEALASLRNAGQSDPFQLAILDMMMPAMDG 603
Query: 87 IEATKAMRA----------MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
IE A+R M S I+G E ER AG++ C TKP+
Sbjct: 604 IELAHAIRTDPSIPPLHMVMLTSSGIIG------EMERS--QAAGIEYCLTKPV 649
>gi|365857568|ref|ZP_09397557.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Acetobacteraceae bacterium AT-5844]
gi|363715997|gb|EHL99414.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Acetobacteraceae bacterium AT-5844]
Length = 830
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 74/116 (63%), Gaps = 4/116 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + + + S IL++ G V +A++G+EA++ A+F +V +D+ MPVMDGIEA
Sbjct: 569 LVVDDNRVNQMVISRILQAGGHHVTLADHGEEALERLDE-AEFDLVAMDLNMPVMDGIEA 627
Query: 90 TKAMRAMKVE---SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TK R ++ I+ +T+ +E R ++AG+D C TKP+ A ++ L++ L
Sbjct: 628 TKLYRMASLDLPHLPIIALTADATEYARTRALEAGMDACITKPVDAAALLNLIDHL 683
>gi|350633843|gb|EHA22207.1| hypothetical protein ASPNIDRAFT_192530 [Aspergillus niger ATCC
1015]
Length = 652
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
EG + ++ R P S R L+V+D+ + +RI S L++ GF+V A NG+EAVD
Sbjct: 509 EGHEAPEEPR--SEPRSHPRERRILLVEDNVINKRILSRKLQTSGFQVSEASNGQEAVDA 566
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGL 122
+ +F V +D MPVMDG A++ +R + + I+GVT+ +++ + AG+
Sbjct: 567 IQQQGRFDCVLMDQVMPVMDGTTASRTIRQLDGPMAQVPILGVTANVRTAQKDEMLAAGM 626
Query: 123 DLCYTKPLTMAKIVPLLEELQK 144
+ KP M ++ +++LQ+
Sbjct: 627 NDIIYKPYKMPDLIERIKQLQQ 648
>gi|358375262|dbj|GAA91846.1| histidine kinase G2 [Aspergillus kawachii IFO 4308]
Length = 652
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 3/128 (2%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P S R L+V+D+ + +RI S L++ GF+V A NG+EAVD + +F V +D
Sbjct: 521 PRSHPRERRILLVEDNVINKRILSRKLQTSGFQVSEASNGQEAVDAVQQQGRFDCVLMDQ 580
Query: 80 EMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
MP+MDG A++A+R + + I+GVT+ +++ + AG++ KP M ++
Sbjct: 581 VMPIMDGTTASRAIRQLDGPMAQVPILGVTANVRTAQKDEMLAAGMNDIIYKPYKMPDLI 640
Query: 137 PLLEELQK 144
+++LQ+
Sbjct: 641 ERIKQLQQ 648
>gi|406890819|gb|EKD36611.1| hypothetical protein ACD_75C01440G0002, partial [uncultured
bacterium]
Length = 528
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 72/121 (59%), Gaps = 5/121 (4%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P LVV+D+ + + S +L+ +G V +A NG +A+ + R F +F+D++MP MD
Sbjct: 407 PIRILVVEDEKINALVISAMLRKLGHDVHLATNGLQALQVIRE-CDFDCIFMDIQMPEMD 465
Query: 86 GIEATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
G+E T+A+R M K I+ +T+ + +RE F+ AG+D TKP+ M +V +L +
Sbjct: 466 GVETTRAIRTMTGRQKKVVPIIALTAHAMKGDRERFIDAGMDDYLTKPVDMGSLVEVLRK 525
Query: 142 L 142
+
Sbjct: 526 V 526
>gi|66828273|ref|XP_647491.1| response regulator receiver domain-containing protein
[Dictyostelium discoideum AX4]
gi|60475524|gb|EAL73459.1| response regulator receiver domain-containing protein
[Dictyostelium discoideum AX4]
Length = 382
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 71/116 (61%), Gaps = 9/116 (7%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+DDP+ R I S LK +G K+ +AENG +AV+ K+ I+ +D+ MP+M G EA
Sbjct: 11 LVVEDDPLNRIIASKFLKKLGHKITLAENGLQAVNAVENN-KYDIILMDVNMPIMGGKEA 69
Query: 90 TKAMRAM----KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
TK +R M ++++ I+G+T+ ER+ ++AG+D KP ++ +E+
Sbjct: 70 TKIIREMQQSLRIKTPIIGLTT----VERQECIEAGMDDHLFKPCKFQQLDSKIEQ 121
>gi|171909890|ref|ZP_02925360.1| two-component hybrid sensor and regulator [Verrucomicrobium
spinosum DSM 4136]
Length = 836
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 78/128 (60%), Gaps = 12/128 (9%)
Query: 16 ISENPVSKNRPYFA-------LVVDDDPMIRRIHSMILKSVGF-KVEVAENGKEAVDLFR 67
+ E+P + R FA L+V+D PM +++ M+L +G+ V++AENG+EAVD+
Sbjct: 691 LPESPAAPERQTFAQDHPARILLVEDQPMNQKLAKMMLNKLGYLNVDIAENGREAVDMV- 749
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRA---MKVESKIVGVTSRNSETEREVFMQAGLDL 124
A + +VF+D++MP++ G +AT+ +RA +K + IV +T +E M+AG++
Sbjct: 750 VDATYDLVFMDLQMPILGGEDATREIRANFHVKHQPVIVAMTGHTLSGVKESCMEAGMNG 809
Query: 125 CYTKPLTM 132
KP+++
Sbjct: 810 FLCKPVSL 817
>gi|317037824|ref|XP_001402418.2| histidine kinase G2 [Aspergillus niger CBS 513.88]
Length = 652
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 5/142 (3%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
EG + ++ R P S R L+V+D+ + +RI S L++ GF+V A NG+EAVD
Sbjct: 509 EGPQAPEEPR--SEPRSHPRERRILLVEDNVINKRILSRKLQTSGFQVSEASNGQEAVDA 566
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGL 122
+ +F V +D MP+MDG A++ +R + + I+GVT+ +++ + AG+
Sbjct: 567 IQQQGRFDCVLMDQVMPIMDGTTASRTIRQLDGPMAQVPILGVTANVRTAQKDEMLAAGM 626
Query: 123 DLCYTKPLTMAKIVPLLEELQK 144
+ KP M ++ +++LQ+
Sbjct: 627 NDIIYKPYKMPDLIERIKQLQQ 648
>gi|84516567|ref|ZP_01003926.1| hypothetical protein SKA53_08146 [Loktanella vestfoldensis SKA53]
gi|84509603|gb|EAQ06061.1| hypothetical protein SKA53_08146 [Loktanella vestfoldensis SKA53]
Length = 720
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 71/110 (64%), Gaps = 1/110 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + R + + +L+S G +V A +G A+DL + A F IV +D++MPVMDG+ A
Sbjct: 468 LLVEDNAINREVAAALLQSFGARVVTANDGSIALDLVQLAA-FDIVLMDLQMPVMDGLAA 526
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+A+RA+ ++ I+G+T+ +R+ + AG+ KP+T K+ +L
Sbjct: 527 TRAIRALGIDLPIIGLTANAYAEDRQRCLDAGMTDFVAKPVTRDKLGSML 576
>gi|326326124|ref|YP_004250934.1| Putative sensor protein [Vibrio nigripulchritudo]
gi|323669176|emb|CBJ93233.1| Putative sensor protein [Vibrio nigripulchritudo]
Length = 688
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA-KFHIV 75
SE P+ ++ + LV +D P + + ++L S+G V++ ENG A+D + ++
Sbjct: 561 SEKPLRNSKKFNILVAEDSPANQMVIKLMLTSLGHSVDIVENGLMALDFVSAHQDELDVI 620
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
F+D+ MP MDG+ ATKA+R V I+ +T+ T+RE AG+D TKP+
Sbjct: 621 FMDISMPKMDGLAATKALRQQGVGLPIIALTAHALNTDREQCFAAGMDKFVTKPI 675
>gi|171685560|ref|XP_001907721.1| hypothetical protein [Podospora anserina S mat+]
gi|170942741|emb|CAP68394.1| unnamed protein product [Podospora anserina S mat+]
Length = 1262
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 81/148 (54%), Gaps = 13/148 (8%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
++S +++P + R L+VDD+P+ ++ + +++ + A NG EA L++
Sbjct: 1113 TTSNAGGTAQSPSAPTR--HLLLVDDNPINIKLLTHVVRKLNHTFLTAANGLEAAQLYKK 1170
Query: 69 -----GAKFHIVFIDMEMPVMDGIEATKAMRAMKV------ESKIVGVTSRNSETEREVF 117
GA+F +VF+D+ MP+M+G EAT+ +R M+ + KIV +T +S+ R
Sbjct: 1171 SLEGQGARFDLVFMDISMPIMNGFEATREIRQMEANVGVVDKVKIVALTGLSSDLSRNEA 1230
Query: 118 MQAGLDLCYTKPLTMAKIVPLLEELQKN 145
+G DL TKP+ M + +L EL +
Sbjct: 1231 TASGCDLFLTKPVKMNVVREVLNELNND 1258
>gi|390949067|ref|YP_006412826.1| signal transduction histidine kinase [Thiocystis violascens DSM
198]
gi|390425636|gb|AFL72701.1| signal transduction histidine kinase [Thiocystis violascens DSM
198]
Length = 690
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+P+ +++ +L+ G +V +AENGK AVDLF A F +V +DM+MPVMDGIEA
Sbjct: 570 LLVEDNPINQKLARKLLERWGHEVTLAENGKIAVDLFEPSA-FDLVLMDMQMPVMDGIEA 628
Query: 90 TKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +R + + IV +T+ ++R ++AG+D KPL
Sbjct: 629 TRRIRDKERGSARTPIVAMTANVMASDRARCLEAGMDEHLPKPL 672
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 35/120 (29%), Positives = 58/120 (48%), Gaps = 6/120 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK----FHIVFIDMEMPVM 84
ALVVDD P+ R + L+ G A +G+EA+ L R+G F ++ +D MP M
Sbjct: 424 ALVVDDHPINRETLAGWLRHWGLTTLEAGSGQEALALARSGQSSRTPFDLLLLDARMPDM 483
Query: 85 DGIEATKAMRA--MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
DG+E + A + + ++V ++ S + G+ TKP T +++ L L
Sbjct: 484 DGLELAARLVAEGLIAQGRMVMLSCGGSPGNAQRGQDLGIAATLTKPATPRELIETLTRL 543
>gi|171915309|ref|ZP_02930779.1| Multi-sensor Hybrid Histidine Kinase [Verrucomicrobium spinosum DSM
4136]
Length = 1205
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 51/145 (35%), Positives = 80/145 (55%), Gaps = 15/145 (10%)
Query: 10 SSKKARISENP---VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
S K A ++ P S + P+ LVV+D+ + R+ ++L+ +G+ E+A +G E +D F
Sbjct: 926 SEKNAAPADTPNGRASDHIPHM-LVVEDNEVNARLAILLLEKLGYTYELARDGAEGLDRF 984
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAM-------KVESKIVGVTSRNSETEREVFMQ 119
G KF V +D MPVMDG EAT+ +RA+ + S+I+ +T+ ERE +
Sbjct: 985 TCG-KFDAVLMDCHMPVMDGYEATRRIRALEESTDWQRPHSRIIAMTANAMTGERERCLL 1043
Query: 120 AGLDLCYTKPLTMAKIVPLLEELQK 144
AG+D KPL K L+E L +
Sbjct: 1044 AGMDDYLAKPL---KATLLMETLSR 1065
>gi|257455156|ref|ZP_05620394.1| sensory box histidine kinase/response regulator [Enhydrobacter
aerosaccus SK60]
gi|257447489|gb|EEV22494.1| sensory box histidine kinase/response regulator [Enhydrobacter
aerosaccus SK60]
Length = 912
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/121 (30%), Positives = 72/121 (59%), Gaps = 1/121 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIV 75
S N + L+ +D+P+ ++I L+++G++ VA +G++AV L + +V
Sbjct: 784 SPNDAHPSSQKLILIAEDNPVNQKIAKKHLEALGYRYLVASDGEQAVKLLSENRQQIGLV 843
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
+D MP++DGIEAT+ +R K IV +T+ +S+ ++ + ++AG+D TKP+ K+
Sbjct: 844 LMDCRMPILDGIEATRIIRLNKDSVPIVALTANDSDDDKNICLEAGMDSFLTKPINKQKL 903
Query: 136 V 136
+
Sbjct: 904 I 904
>gi|452980760|gb|EME80521.1| hypothetical protein MYCFIDRAFT_95252, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1003
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 71/121 (58%), Gaps = 10/121 (8%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG----AKFHIVFIDMEMPVMD 85
L+V+D+ + +R+ L GF+V VA +G+EA+D AK +V +D+EMPVM
Sbjct: 883 LIVEDNLVNQRVMRKQLTRAGFRVTVANHGREALDCLHPAGTNPAKIGVVLMDIEMPVMG 942
Query: 86 GIEATKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G+E T+ +R + ES+ I+GVT+ ++ + AG+D TKP M++++P +
Sbjct: 943 GLECTRIIRLRERESQRTSRMPILGVTANARAEQQAEAIDAGMDRVVTKPFHMSELLPAI 1002
Query: 140 E 140
E
Sbjct: 1003 E 1003
>gi|34557246|ref|NP_907061.1| sensory transduction histidine kinase [Wolinella succinogenes DSM
1740]
gi|34482962|emb|CAE09961.1| SENSORY TRANSDUCTION HISTIDINE KINASE [Wolinella succinogenes]
Length = 1555
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 68/107 (63%), Gaps = 1/107 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGIE 88
L+V+D+ M R I +L+ G ++++A+NG+EAV L++ K + ++ +D++MPVMDG E
Sbjct: 1239 LLVEDNAMNREIIMGMLQPFGIRIDIAQNGQEAVTLYQENPKRYELILMDIQMPVMDGYE 1298
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
ATK +RA I+ +T+ +++ E AG+D KP+ + K+
Sbjct: 1299 ATKILRAQGANLPIIALTANAMKSDIERTKAAGMDEHLNKPIVVEKL 1345
Score = 54.7 bits (130), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/116 (30%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH-IVFIDMEMPVMDGIE 88
L+VDD P ++I + +LK +V VA +G+EA+ L + F+ ++ +D +MP MDGIE
Sbjct: 1093 LIVDDTPSWQKILARLLKGFHIEVSVASSGEEALRLIKEQPGFYDLILMDWKMPQMDGIE 1152
Query: 89 ATKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TK ++ I+ V+S E + G+++ KP+ + + +L E+
Sbjct: 1153 TTKLIKESCETPPPTIIMVSSYRQENIVNAAKEQGINVFLQKPINPSLLYNVLLEI 1208
>gi|359413753|ref|ZP_09206218.1| multi-sensor hybrid histidine kinase [Clostridium sp. DL-VIII]
gi|357172637|gb|EHJ00812.1| multi-sensor hybrid histidine kinase [Clostridium sp. DL-VIII]
Length = 983
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + R+ ILK G K ++A NG EAV + K+ I+F+D +MP+MDG EA
Sbjct: 732 LLVEDNEINIRLFINILKVRGLKCDIALNGVEAVAAYENN-KYDIIFMDCQMPMMDGYEA 790
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
TK +R ESK I+ +T+ + +RE ++AG+D TKP +++ +L++ K
Sbjct: 791 TKKIR--NTESKHIPIIAMTAHAMQGDREKCLEAGMDDYLTKPFGFNQVIEMLQKYVK 846
>gi|89076676|ref|ZP_01162968.1| hypothetical protein SKA34_13950 [Photobacterium sp. SKA34]
gi|89047657|gb|EAR53262.1| hypothetical protein SKA34_13950 [Photobacterium sp. SKA34]
Length = 701
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMPVMDGIE 88
L+ +D + + ++L+ G KV + NGKEA+++ G KF +V +D+ MP++DG+E
Sbjct: 575 LLAEDSKTNQLVAKLMLERRGHKVAITNNGKEAINVLLQGHNKFDLVLMDISMPILDGLE 634
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
ATK +R K+ IV +T+ +++++++ G+D KP+ ++ LLE+ Q+
Sbjct: 635 ATKQLRQRKISIPIVALTANAMQSDQKIYHDIGMDGFLAKPICSNELDALLEKYQE 690
>gi|90578600|ref|ZP_01234410.1| hypothetical protein VAS14_02823 [Photobacterium angustum S14]
gi|90439433|gb|EAS64614.1| hypothetical protein VAS14_02823 [Photobacterium angustum S14]
Length = 700
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMPVMDGIE 88
L+ +D + + ++L+ G KV + NGKEA+++ G KF +V +D+ MP++DG+E
Sbjct: 574 LLAEDSNTNQLVAKLMLERRGHKVAITNNGKEAINVLLQGHNKFDLVLMDISMPILDGLE 633
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
ATK +R K+ IV +T+ +++++++ G+D KP+ ++ LLE+ Q+
Sbjct: 634 ATKQLRQRKISIPIVALTANAMQSDQKIYHDIGMDGFLAKPICSNELDALLEKYQE 689
>gi|409427382|ref|ZP_11261891.1| sensory box histidine kinase/response regulator [Pseudomonas sp. HYS]
Length = 1154
Score = 75.9 bits (185), Expect = 5e-12, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 79/145 (54%), Gaps = 11/145 (7%)
Query: 3 IGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
+ AE A + A +S P + LVVDD R + S L+ +G +V ENG+ A
Sbjct: 897 LAAEPAPTEDAAGLSGGPARR-----ILVVDDLSASRLVLSQQLEFLGHEVLAVENGQSA 951
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVF 117
+ ++ GA F +V D MPVM+G + +R ++ S+ IVG T+ + ER
Sbjct: 952 LQAWQNGA-FDLVLSDCNMPVMNGYALARGIRRLERSSQRPAIAIVGCTANAMKEERARC 1010
Query: 118 MQAGLDLCYTKPLTMAKIVPLLEEL 142
++AG+D C KP+ +A++V ++E+L
Sbjct: 1011 LEAGMDECLVKPVALAQLVAVIEKL 1035
>gi|152982169|ref|YP_001352554.1| sensory box histidine kinase/response regulator [Janthinobacterium
sp. Marseille]
gi|151282246|gb|ABR90656.1| sensory box histidine kinase/response regulator [Janthinobacterium
sp. Marseille]
Length = 702
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P R L+ +D+ + +++ + +LK G VE+A+NG EAV + F +V +DM
Sbjct: 573 PAKSTRQLRILLAEDNEINQKVAATLLKKAGHTVEIAQNGLEAVQAVQNSV-FDVVLMDM 631
Query: 80 EMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
MP MDG+ AT+A+R M + IV +T+ + ++ ++ M AG++ KP M ++
Sbjct: 632 HMPEMDGLAATRAIRNMSGPAATLPIVALTAAGALSDIQICMDAGMNYFLVKPFRMERLS 691
Query: 137 PLLEEL 142
+L EL
Sbjct: 692 SILHEL 697
>gi|424038107|ref|ZP_17776757.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
protein, partial [Vibrio cholerae HENC-02]
gi|408894769|gb|EKM31371.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
protein, partial [Vibrio cholerae HENC-02]
Length = 586
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/139 (32%), Positives = 77/139 (55%), Gaps = 9/139 (6%)
Query: 7 GASSSKKARISENPVSKN----RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
G S+ K + P S N R L+V+D+ + +++ S++L G++ E+AENG+ A
Sbjct: 448 GISAKSKPQDKPEPTSINTLPSRSERILLVEDNTVNQKVASLLLSKAGYQFEIAENGQIA 507
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVF 117
VD+F+ F I+ +D MPVMDG EATK +RA + S I+ +T+ + + +
Sbjct: 508 VDMFQQDNGFDIILMDCMMPVMDGFEATKEIRAYEKNSGLPKTPIIALTASVVDDDIQRC 567
Query: 118 MQAGLDLCYTKPLTMAKIV 136
+G+D KP+ K++
Sbjct: 568 YDSGMDAYVPKPVRKEKLL 586
Score = 61.6 bits (148), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/127 (29%), Positives = 68/127 (53%), Gaps = 16/127 (12%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + ++I + + GF ++A NG EAV++F+ ++ ++ +D MPVMDG EA
Sbjct: 313 LVVDDNTVNQKIAGLHVAKAGFTFDLAANGLEAVEMFKKN-QYSLILMDCMMPVMDGFEA 371
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKP---------LTMAK 134
T+ +R ++ E I+ +T+ + + + G+D KP L A
Sbjct: 372 TQKIRQLEHEQNHSVKIPIIALTASVVDDDIQKCFDVGMDDYVPKPFKANILKEKLAKAT 431
Query: 135 IVPLLEE 141
VP++E+
Sbjct: 432 AVPIVED 438
>gi|124004919|ref|ZP_01689762.1| signal transduction histidine kinase [Microscilla marina ATCC 23134]
gi|123989597|gb|EAY29143.1| signal transduction histidine kinase [Microscilla marina ATCC 23134]
Length = 1367
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD+ + R++ S IL + G + +AE+G +A+D + + + ++F+D++MP MDG+E
Sbjct: 1109 LIVDDNIVNRKVASEILNNAGCIISLAESGYQALDKVQAHS-YDLIFMDIQMPGMDGVET 1167
Query: 90 TKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
T+A++ + +E IV +T+ + + +RE FM+ GLD +KP+ ++ ++E
Sbjct: 1168 TRAIKGLGIEQLPPIVAMTAYSMKEDRERFMEEGLDDYVSKPVKAQTLIQKVQE 1221
>gi|452838646|gb|EME40586.1| hypothetical protein DOTSEDRAFT_74214 [Dothistroma septosporum NZE10]
Length = 1105
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 76/125 (60%), Gaps = 10/125 (8%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR----TGAKFHIVFIDMEMPVMD 85
L+V+D+ + +R+ L GF+V VA +GKEA+DL AK +V +D+EMP+M
Sbjct: 978 LIVEDNLVNQRVMRKQLIRAGFQVIVANHGKEALDLLYPPLVEPAKVDVVLMDIEMPIMG 1037
Query: 86 GIEATKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G+E TK +R + ES+ I+GVT+ ++ ++AG+D TKP M++++P +
Sbjct: 1038 GLECTKIIRFREQESEQERHLPILGVTANARAEQQAAAIEAGMDRVVTKPFHMSELLPAI 1097
Query: 140 EELQK 144
E +Q+
Sbjct: 1098 ERVQR 1102
>gi|395323809|gb|EJF56265.1| hypothetical protein DICSQDRAFT_71854 [Dichomitus squalens LYAD-421
SS1]
Length = 1079
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 44/146 (30%), Positives = 77/146 (52%), Gaps = 31/146 (21%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA------------------- 70
LVVDDDP+ R++ S +L +G KV AENG+ A+DL G
Sbjct: 918 LVVDDDPLTRKLMSRMLTRLGCKVMTAENGEVALDLILHGTTQRETPSSEDTGSGGLSLD 977
Query: 71 ---------KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
+F +VF+D +MPV+ G++A +RA+ + +VGVT ++++ ++ AG
Sbjct: 978 GVGANENEYRFAVVFLDNQMPVLSGLDAVAKLRALNRKDFVVGVTGNALLSDQQEYVNAG 1037
Query: 122 LDLCYTKPL---TMAKIVPLLEELQK 144
+D TKP+ ++ ++ + EE ++
Sbjct: 1038 VDHVLTKPVLEKSLKSMLSIAEERRR 1063
>gi|383790917|ref|YP_005475491.1| PAS domain-containing protein [Spirochaeta africana DSM 8902]
gi|383107451|gb|AFG37784.1| PAS domain S-box [Spirochaeta africana DSM 8902]
Length = 792
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D + + + IL+ G +V A NG++AV++FR +F +VF+D++MPVM+G A
Sbjct: 543 LLAEDHEVNQELFRTILEHCGLQVVTASNGRDAVEMFRP-RQFAMVFMDVQMPVMNGYNA 601
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
+ +RA + IVGVT+ + ERE QAG++ KP + PLL
Sbjct: 602 ARRIRAADPDVPIVGVTANALQGEREKCRQAGMNDYLPKPFKSRDVYPLL 651
>gi|251790598|ref|YP_003005319.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Dickeya zeae Ech1591]
gi|247539219|gb|ACT07840.1| histidine kinase [Dickeya zeae Ech1591]
Length = 955
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ + L S+G++V A +G +A+D+ IV D+ MP MDG
Sbjct: 832 LVVDDHPINRRLLADQLGSLGYQVITANDGLDALDVLAKNP-VDIVLTDVNMPNMDGYRF 890
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R M ++GVT+ ER+ +QAG+D C +KP+T+
Sbjct: 891 TQQLREMGQTLPVIGVTANALAEERQRCLQAGMDNCLSKPVTL 933
>gi|255523233|ref|ZP_05390204.1| PAS/PAC sensor hybrid histidine kinase [Clostridium carboxidivorans
P7]
gi|296186196|ref|ZP_06854601.1| PAS domain S-box domain-containing protein [Clostridium
carboxidivorans P7]
gi|255513101|gb|EET89370.1| PAS/PAC sensor hybrid histidine kinase [Clostridium carboxidivorans
P7]
gi|296049464|gb|EFG88893.1| PAS domain S-box domain-containing protein [Clostridium
carboxidivorans P7]
Length = 779
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 73/113 (64%), Gaps = 3/113 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+DD + +++ +LK G+ V++A NG EA+ ++ K+ I+ +D++MPVM+GIE
Sbjct: 545 LLVEDDKLNQQVIGRMLKERGYLVDIAGNGLEAIKMYEN-KKYDIILMDIQMPVMNGIET 603
Query: 90 TKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
TK +R ++E+ I+ +T+ + ++E F+ G+D KP+ M K+ ++E
Sbjct: 604 TKIIREKEIENHIPIIAITAYALKGDKEKFLSKGMDDYIPKPVKMDKLFNVIE 656
>gi|283779193|ref|YP_003369948.1| PAS/PAC sensor hybrid histidine kinase [Pirellula staleyi DSM 6068]
gi|283437646|gb|ADB16088.1| PAS/PAC sensor hybrid histidine kinase [Pirellula staleyi DSM 6068]
Length = 827
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D P +R+ S +L G VE+ +NG++A+ GA F IV +DM+MPVMDG EA
Sbjct: 705 LLAEDGPDNQRLISFLLTKAGASVELVDNGEKALQRALEGA-FDIVLMDMQMPVMDGYEA 763
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ +R+ IV +T+ +R+ ++AG TKP+ A+++ L+ L
Sbjct: 764 TRQLRSAGYAQPIVALTAHAMAGDRQKCIEAGCTEYATKPIDRAQLIGLIARL 816
>gi|443476320|ref|ZP_21066232.1| multi-sensor hybrid histidine kinase [Pseudanabaena biceps PCC 7429]
gi|443018713|gb|ELS32917.1| multi-sensor hybrid histidine kinase [Pseudanabaena biceps PCC 7429]
Length = 1179
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 38/127 (29%), Positives = 77/127 (60%), Gaps = 7/127 (5%)
Query: 21 VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDME 80
+++N P L+ +D+ + +++ IL+ +G++ +VA NG E +D + ++F+DM+
Sbjct: 927 MARNHPLRILLAEDNVINQKVAIHILQRMGYRADVAANGLEVIDALLQ-QPYDLIFMDMQ 985
Query: 81 MPVMDGIEATKAMR------AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
MPVMDGI+AT+ + +IV +T+ + +RE+ + AG+D +KP+ ++
Sbjct: 986 MPVMDGIDATQKIYQNWQDGKFATRPRIVAMTANAMQGDREICLAAGMDDYLSKPIRNSE 1045
Query: 135 IVPLLEE 141
+V +L+E
Sbjct: 1046 LVRVLQE 1052
>gi|66802658|ref|XP_635201.1| hypothetical protein DDB_G0291424 [Dictyostelium discoideum AX4]
gi|60463511|gb|EAL61696.1| hypothetical protein DDB_G0291424 [Dictyostelium discoideum AX4]
Length = 902
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 70/113 (61%), Gaps = 6/113 (5%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
K+RP L+V+D+P+ ++ S +++ F VEVA NG+ A+D+F+ ++ +V +DM MP
Sbjct: 706 KHRP-LVLLVEDNPLQIKVISKVMERYNFDVEVASNGQMALDMFKANPRYELVLMDMIMP 764
Query: 83 VMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+MDG+ AT +R + E + ++ T+ + E+ + + + AG D TKPL
Sbjct: 765 IMDGLTATMLIREYERERGLKRTPVIIQTADSRESHKLICLAAGCDDFMTKPL 817
>gi|329896032|ref|ZP_08271268.1| putative sensor protein [gamma proteobacterium IMCC3088]
gi|328921992|gb|EGG29356.1| putative sensor protein [gamma proteobacterium IMCC3088]
Length = 1448
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 72/117 (61%), Gaps = 5/117 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD + R+I S L+ G + ++A +G EA++ ++ + +++F+D +MP MDG+EA
Sbjct: 1199 LVVDDIEINRKIMSETLRYFGIECDLASDGIEAIEKYKRTSH-NLIFMDCQMPRMDGLEA 1257
Query: 90 TKAMR----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ +R + E I+ VT+ + E+E + +G++L KP T KI L+EE+
Sbjct: 1258 TRRIREYSATINTEPFIIAVTAGTTGEEQEACINSGMNLVIEKPFTHEKISLLIEEI 1314
>gi|313681453|ref|YP_004059191.1| integral membrane sensor hybrid histidine kinase [Sulfuricurvum
kujiense DSM 16994]
gi|313154313|gb|ADR32991.1| integral membrane sensor hybrid histidine kinase [Sulfuricurvum
kujiense DSM 16994]
Length = 1088
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 73/116 (62%), Gaps = 6/116 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALV +D+ + +++ L+ +G ++ +A NG EA + + G+ F I+F+D++MPV+DGIE
Sbjct: 787 ALVAEDNIINQKLIRRTLEDLGLEITIANNGLEAFEKRKNGS-FDIIFMDIQMPVLDGIE 845
Query: 89 ATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
AT+ + + + I+ +T+ + +RE FM AG+D TKPL ++I+ LL
Sbjct: 846 ATQEILDFEEDYGQNHIPIIALTANALKGDRERFMSAGMDEYTTKPLVRSEIISLL 901
>gi|347756849|ref|YP_004864411.1| his Kinase A domain-containing protein [Micavibrio aeruginosavorus
ARL-13]
gi|347589367|gb|AEP08409.1| his Kinase A domain protein [Micavibrio aeruginosavorus ARL-13]
Length = 1051
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 74/131 (56%), Gaps = 5/131 (3%)
Query: 1 MMIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGK 60
M +G + ++ AR+ V+ +P L V+D P+ R + +L+ G V AENG+
Sbjct: 779 MAVGQQRENNFSTARL----VTSIKPKNILAVEDTPLNRDLLDALLRRAGHTVTHAENGQ 834
Query: 61 EAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMR-AMKVESKIVGVTSRNSETEREVFMQ 119
EA+D+ R + ++ +D++MPVMDG+EAT+ +R ++++ I+ +T+ + F
Sbjct: 835 EAIDMLRHRRNYDLILMDIQMPVMDGMEATRIIREELELDIPIIALTAHALPKIAQSFYD 894
Query: 120 AGLDLCYTKPL 130
AG+D KP
Sbjct: 895 AGMDDYLIKPF 905
>gi|421784626|ref|ZP_16221063.1| sensor histidine kinase RcsC [Serratia plymuthica A30]
gi|407753095|gb|EKF63241.1| sensor histidine kinase RcsC [Serratia plymuthica A30]
Length = 956
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/103 (37%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ S L S+G++V A +G +A+D+ IV D+ MP MDG
Sbjct: 831 LVVDDHPINRRLLSDQLGSLGYQVVTANDGLDALDVLNRNT-VDIVLTDVNMPNMDGYHL 889
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R S ++GVT+ E++ ++AG+D C +KP+T+
Sbjct: 890 TQRLRQQHFTSPVIGVTANALAEEKQRCIEAGMDNCLSKPVTL 932
>gi|256822064|ref|YP_003146027.1| Hpt sensor hybrid histidine kinase [Kangiella koreensis DSM 16069]
gi|256795603|gb|ACV26259.1| Hpt sensor hybrid histidine kinase [Kangiella koreensis DSM 16069]
Length = 950
Score = 75.5 bits (184), Expect = 6e-12, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 28 FALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGI 87
+ L VDD+P R+ + +L+ + KV+ AE+G +AV L + + + +D++MP MDG+
Sbjct: 693 YVLAVDDNPANLRLVTTLLQDLNIKVDAAESGMQAVSLSKNKV-YDAILMDIQMPEMDGL 751
Query: 88 EATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
EAT+ +RA + + + I+ +T+ +ERE ++AG+D TKP++ ++ LL
Sbjct: 752 EATRTIRANRTNLNTPIIALTAHAMASEREQLLEAGMDDYMTKPVSEQALINLL 805
>gi|154252416|ref|YP_001413240.1| multi-sensor hybrid histidine kinase [Parvibaculum lavamentivorans
DS-1]
gi|154156366|gb|ABS63583.1| multi-sensor hybrid histidine kinase [Parvibaculum lavamentivorans
DS-1]
Length = 846
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 83/144 (57%), Gaps = 8/144 (5%)
Query: 5 AEGASSSKKARISENPV-SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
+EG + ++ A + P+ N P L+ +D P+ +++ +++ +G ++ +AENG E +
Sbjct: 663 SEGKADTQPAAAGQTPLPGTNAPLRVLLAEDQPVNQKLMCAVMERLGHQLTIAENGVEVI 722
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQA 120
R F I+ +D++MP+MDGI+ TK +RA+ + IV +T+ E E++M A
Sbjct: 723 RKLRE-QSFDIILMDIQMPLMDGIQTTKVIRAVDEPWNDIPIVALTAHAMEGHCELYMAA 781
Query: 121 GLDLCYTKPLTMAKIVPLLEELQK 144
G++ +KP KI L+EE+ +
Sbjct: 782 GMNGFVSKPF---KIDVLVEEMAR 802
>gi|302686342|ref|XP_003032851.1| histidine kinase [Schizophyllum commune H4-8]
gi|300106545|gb|EFI97948.1| histidine kinase [Schizophyllum commune H4-8]
Length = 1050
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 41/126 (32%), Positives = 70/126 (55%), Gaps = 2/126 (1%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA--KFH 73
++ P+ P LVVDD+P+ +I + +L+S+G KV A +G++ +D+ +F
Sbjct: 904 VANGPIPAEEPLEILVVDDEPLTGKIMARLLQSMGAKVTTATDGQQCLDILLGPPERRFD 963
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+V +D MPVM G+EA +R +VG T T++ + AG D+ TKPLT
Sbjct: 964 LVCLDNSMPVMTGLEAVGKLRGAGRLDFVVGCTGNALVTDQGEYKDAGADMILTKPLTRD 1023
Query: 134 KIVPLL 139
+++ L+
Sbjct: 1024 RLMDLV 1029
>gi|427403950|ref|ZP_18894832.1| PAS domain S-box protein [Massilia timonae CCUG 45783]
gi|425717352|gb|EKU80316.1| PAS domain S-box protein [Massilia timonae CCUG 45783]
Length = 1371
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 69/116 (59%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + + + IL G +E+A NG+ A+ + + A F +V +D++MPVM+G EA
Sbjct: 1035 LLVEDNQINQEVAGFILAHAGATLEIAANGRAALSMLQEDAAFDVVLMDLQMPVMNGFEA 1094
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
T A+RA ++ IV +T+ + +R+ + AG+ KP+ + +V L + ++
Sbjct: 1095 TAAIRAAGLDLPIVAITANAMDEDRQRSLDAGMQAHLAKPIDVDALVATLSRVTQH 1150
Score = 48.5 bits (114), Expect = 0.001, Method: Composition-based stats.
Identities = 34/119 (28%), Positives = 59/119 (49%), Gaps = 7/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV DD+ R + + G++V+ A +G A++ R GA++ I F+D MP +DG+
Sbjct: 892 LVADDNASARAALAAACAAFGWRVDTAPDGAAALETLR-GARYDIAFVDSAMPGLDGLPL 950
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQ------AGLDLCYTKPLTMAKIVPLLEEL 142
A+RA +V + + + + +TER + G+ KP T A + +E L
Sbjct: 951 ISAVRAAQVPAPRFCLLAPDPDTERYAELADDPANGLGVTAVLGKPFTRASLGAAVERL 1009
>gi|408392287|gb|EKJ71644.1| hypothetical protein FPSE_08090 [Fusarium pseudograminearum CS3096]
Length = 1123
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 45/138 (32%), Positives = 77/138 (55%), Gaps = 20/138 (14%)
Query: 20 PVSKNRPYFA--------LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-A 70
P K+ P ++ L+VDD+P+ ++ M +K + + A NG+EAV ++ A
Sbjct: 984 PPEKSNPIYSPESAGKTFLLVDDNPINLKMLVMFMKKLKLQYSTASNGQEAVAKYKENPA 1043
Query: 71 KFHIVFIDMEMPVMDGIEATKAMRAMKVESKI--------VGVTSRNSETEREVFMQAGL 122
+ VF+D+ MPVM+G EAT+ +R + E I G+ SR+++ E + +G+
Sbjct: 1044 SYKCVFMDISMPVMNGFEATRHIRTFEAECAIPKCSIFALTGLASRDAQQEA---VLSGI 1100
Query: 123 DLCYTKPLTMAKIVPLLE 140
DL TKP+ +A++ LLE
Sbjct: 1101 DLFLTKPIALAEMKHLLE 1118
>gi|440715241|ref|ZP_20895788.1| multi-sensor hybrid histidine kinase [Rhodopirellula baltica SWK14]
gi|436439585|gb|ELP32999.1| multi-sensor hybrid histidine kinase [Rhodopirellula baltica SWK14]
Length = 993
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 4/116 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
LVVDD RR+ ++LK G V AENG+EA+++ +G + +V +DM+MPV+D
Sbjct: 585 LVVDDGEANRRLIELVLKRAGATVMSAENGQEALNMIAEGNESGYPYELVLMDMQMPVLD 644
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
G AT+ +R + + ++ +T +RE M AG D TKP+ + +++ ++ +
Sbjct: 645 GYSATRLLREREDTTPVIALTGNAMRGDREKCMDAGCDDFLTKPVNLDELLEMVSQ 700
>gi|420373598|ref|ZP_14873678.1| response regulator [Shigella flexneri 1235-66]
gi|391317085|gb|EIQ74453.1| response regulator [Shigella flexneri 1235-66]
Length = 187
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 72/121 (59%), Gaps = 5/121 (4%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI-- 74
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ +K HI
Sbjct: 53 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL---SKNHIDI 109
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
V D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 110 VLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLGV 169
Query: 135 I 135
I
Sbjct: 170 I 170
>gi|167648680|ref|YP_001686343.1| integral membrane sensor hybrid histidine kinase [Caulobacter sp.
K31]
gi|167351110|gb|ABZ73845.1| integral membrane sensor hybrid histidine kinase [Caulobacter sp.
K31]
Length = 614
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 7/136 (5%)
Query: 10 SSKKARISENPVSKN-RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
+S ++E+ VS + P LVVDD+P+ RRI + +++ G + A +GKEAV+ +R
Sbjct: 474 ASAPLAVAEDAVSDDGAPGSVLVVDDNPVNRRILAALMEPFGVECGFATSGKEAVEAWRR 533
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLD 123
+ +F+D+ MP MDG+EA++ +RA ++ + IV VT+ E E + QAG+D
Sbjct: 534 -QPWDAIFMDVHMPDMDGVEASRTIRAEEIVAGRGRTPIVAVTASVLTHEVEAYRQAGMD 592
Query: 124 LCYTKPLTMAKIVPLL 139
KP+ + + +L
Sbjct: 593 DVLPKPVDASALASML 608
>gi|315497089|ref|YP_004085893.1| histidine kinase [Asticcacaulis excentricus CB 48]
gi|315415101|gb|ADU11742.1| histidine kinase [Asticcacaulis excentricus CB 48]
Length = 518
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 65/103 (63%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+P+ + ++L+ G +VE A +G+EA+ L G + IVF+D+ +P +DGI
Sbjct: 399 LLVEDNPVNALLAQILLQREGCRVERAASGEEALKLIEAGKPYDIVFMDLGLPGLDGIGT 458
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+AMRA V+ I+ +T+ E +R + AG+D TKP+ +
Sbjct: 459 TRAMRANGVKLPIIALTANAYEEDRRACLTAGMDDFLTKPIEL 501
>gi|300868651|ref|ZP_07113263.1| putative Histidine kinase [Oscillatoria sp. PCC 6506]
gi|300333345|emb|CBN58455.1| putative Histidine kinase [Oscillatoria sp. PCC 6506]
Length = 663
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 4/121 (3%)
Query: 24 NRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
N+P Y L+VDD P+ R++ +L GF ++ A +GKEAV++ + H++++DM MP
Sbjct: 450 NQPQYRILIVDDKPLNRQLLIQLLNPFGFALKEAMDGKEAVEIADSWEP-HLIWMDMRMP 508
Query: 83 VMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
VMDG EATK ++ + I+ +T+ E ER V + AG D KP A I +E
Sbjct: 509 VMDGYEATKQIKGSTKGQATAIIALTASVLEEERAVILSAGCDDFMRKPFREADIFTAIE 568
Query: 141 E 141
+
Sbjct: 569 K 569
>gi|197106737|ref|YP_002132114.1| sensor histidine kinase [Phenylobacterium zucineum HLK1]
gi|196480157|gb|ACG79685.1| sensor histidine kinase [Phenylobacterium zucineum HLK1]
Length = 643
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 72/111 (64%), Gaps = 6/111 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L +D+P +++ + +L S+G +V++ +GKEAV+ +RTGA + ++ +D++MPVMDGI A
Sbjct: 501 LAAEDNPTNQQVLAAVLGSLGIEVDIVPDGKEAVEAWRTGA-YDLILMDIQMPVMDGITA 559
Query: 90 TKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
+A+R ++ + IV +T+ + E ++ AG+D KP+ +AK+
Sbjct: 560 ARAIREQEIAEGRRRTPIVALTANALTHQVEEYLAAGMDAHVAKPIEIAKL 610
>gi|186683828|ref|YP_001867024.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
gi|186466280|gb|ACC82081.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
Length = 1888
Score = 75.5 bits (184), Expect = 7e-12, Method: Composition-based stats.
Identities = 46/121 (38%), Positives = 68/121 (56%), Gaps = 7/121 (5%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVVDD R + IL S+GF V+ A NG EA+ L++ H++F+DM MP+MDG
Sbjct: 1667 YRILVVDDSIDSRLVLVKILTSIGFAVQEAANGTEAIALWQQWQP-HLIFMDMRMPIMDG 1725
Query: 87 IEATKAMRAMKVES------KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
EATK ++A + S I+ +T+ E +RE ++AG D KP +++ L
Sbjct: 1726 YEATKIIKAREETSIPNRKTIIIALTANAFEEQREATIKAGCDDYINKPFREEELLKKLS 1785
Query: 141 E 141
E
Sbjct: 1786 E 1786
>gi|374291516|ref|YP_005038551.1| two-component response regulator (CheY-like) [Azospirillum
lipoferum 4B]
gi|357423455|emb|CBS86312.1| two-component response regulator (CheY-like) [Azospirillum
lipoferum 4B]
Length = 492
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+P+ R + + K++G V AE+G + V G +F ++ +D++MPVMDG EA
Sbjct: 369 LLVEDNPIGRLVAAGFFKALGHAVTTAEDGAQGVAAATEG-RFDLIVMDVQMPVMDGHEA 427
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQ---AGLDLCYTKPLTMAKIVPLLEEL 142
++A+RA+ E+ V + + + T+ E Q AG+D C KPLTM ++ +LE L
Sbjct: 428 SRAIRALPGEAGRVPIVALTAGTDAEDDAQCRAAGMDDCLHKPLTMDRLCAVLERL 483
>gi|86144789|ref|ZP_01063121.1| hypothetical two-component sensor [Vibrio sp. MED222]
gi|85837688|gb|EAQ55800.1| hypothetical two-component sensor [Vibrio sp. MED222]
Length = 808
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 78/130 (60%), Gaps = 7/130 (5%)
Query: 12 KKARISENPVSKNRPYFA--LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
K+A I E P P+ LVV+D + +++ M+LK +GF+V++A+NG+ V+ F+
Sbjct: 657 KQAPIKEEPKPVAAPFSGKVLVVEDSRVNQQVAKMMLKKLGFEVDIADNGEIGVEKFQAN 716
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLC 125
++ ++F+D +MPV+DG EATK +RA++ + IV +T+ + ++ + G+D
Sbjct: 717 -EYEMIFMDCQMPVLDGFEATKQIRALEEGTSKHIPIVALTANVVQRDKHLCFDVGMDEF 775
Query: 126 YTKPLTMAKI 135
KP+ K+
Sbjct: 776 LPKPVNQGKL 785
>gi|157371505|ref|YP_001479494.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Serratia proteamaculans 568]
gi|157323269|gb|ABV42366.1| integral membrane sensor hybrid histidine kinase [Serratia
proteamaculans 568]
Length = 957
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ S L S+G++V A +G +A+D+ IV D+ MP MDG
Sbjct: 832 LVVDDHPINRRLLSDQLGSLGYQVVTANDGVDALDVLNRNT-VDIVLTDVNMPNMDGYRL 890
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R + + ++GVT+ E++ ++AG+D C +KP+T+
Sbjct: 891 TQRLRQLHFTAPVIGVTANALAEEKQRCIEAGMDNCLSKPVTL 933
>gi|411116397|ref|ZP_11388884.1| signal transduction histidine kinase [Oscillatoriales
cyanobacterium JSC-12]
gi|410712500|gb|EKQ70001.1| signal transduction histidine kinase [Oscillatoriales
cyanobacterium JSC-12]
Length = 870
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 48/142 (33%), Positives = 80/142 (56%), Gaps = 9/142 (6%)
Query: 2 MIGAEGASSSKKARISENPV--SKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAEN 58
+I +G S +A I+ V + +P Y LV +D+P R + +L VGF +E A N
Sbjct: 627 VIPVDGVSVESQAAIAGKVVKLAPQQPIYRILVAEDNPANRLVLMTLLTKVGFDLEEAVN 686
Query: 59 GKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETE 113
G+EA++L++T H++F+D+ MP M+G EAT+ +RA + +KI+ +T+ E +
Sbjct: 687 GQEAIELWQTWHP-HLIFMDVRMPFMNGYEATRQIRAQEPFNETQRTKIIALTASAFEEQ 745
Query: 114 REVFMQAGLDLCYTKPLTMAKI 135
RE + +G D KP +I
Sbjct: 746 REEALASGCDDFIRKPFKAQEI 767
>gi|293395210|ref|ZP_06639496.1| sensor histidine kinase RcsC [Serratia odorifera DSM 4582]
gi|291422387|gb|EFE95630.1| sensor histidine kinase RcsC [Serratia odorifera DSM 4582]
Length = 930
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 39/103 (37%), Positives = 63/103 (61%), Gaps = 1/103 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ S L S+G++V A +G +A+ + + IV D+ MP MDG
Sbjct: 808 LVVDDHPINRRLLSDQLTSLGYRVITANDGVDALGVL-SHNPVDIVLTDVNMPNMDGYRL 866
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R M S ++GVT+ E++ ++AG+D C +KP+T+
Sbjct: 867 TQRLRQMNFTSPVIGVTANALAEEKQRCIEAGMDNCLSKPVTL 909
>gi|358638317|dbj|BAL25614.1| putative hybrid sensor and regulator protein [Azoarcus sp. KH32C]
Length = 1068
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 72/115 (62%), Gaps = 4/115 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D P+ +++ + + + G +V +A NG EAVDLF T + IVF+DM+MPVM G+EA
Sbjct: 821 LLVEDHPINQKLAAELFEMWGHRVTLAANGHEAVDLFPT-MHWDIVFMDMQMPVMGGVEA 879
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
T+ +RA + + I+ +T+ +R+ ++AG+D KP+ + LLE+
Sbjct: 880 TRLIRASEPPGRRTPIIAMTASAMSEDRKRCLEAGMDDHIAKPIDRQAVHRLLEQ 934
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 6/109 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG----AKFHIVFIDMEMPVM 84
ALV D DP RR + L++ F V+ A +G +A+ R + ++ ID +P +
Sbjct: 670 ALVADGDPAQRRSLAQWLRAWSFTVDEAADGHQALGKCRAAPPGECPYRVILIDSALPAL 729
Query: 85 DGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
DG +AMR + ++V +++R + + + GL +KP T
Sbjct: 730 DGFGFAEAMRNEGRSADVQMVMLSARGEKGDARRCRELGLAAYLSKPTT 778
>gi|421499219|ref|ZP_15946274.1| hybrid sensory histidine kinase BarA [Aeromonas media WS]
gi|407181745|gb|EKE55747.1| hybrid sensory histidine kinase BarA [Aeromonas media WS]
Length = 906
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L VDD+ ++ + +LK + +V V +NGKEAV+L ++ F I+F+D++MPVMDGI A
Sbjct: 668 LAVDDNAANLKLIAAMLKEMVTEVVVCKNGKEAVNLAQS-QPFDIIFMDIQMPVMDGISA 726
Query: 90 TKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+A+R ++ E+ IV VT+ ERE ++ G+D +KP+ + L+ +
Sbjct: 727 TQAIRHHSLNTETPIVAVTAHAIPGERERLIRQGMDDYLSKPIDEGMLAQLITDF 781
>gi|451947711|ref|YP_007468306.1| signal transduction histidine kinase [Desulfocapsa sulfexigens DSM
10523]
gi|451907059|gb|AGF78653.1| signal transduction histidine kinase [Desulfocapsa sulfexigens DSM
10523]
Length = 714
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 68/103 (66%), Gaps = 2/103 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGIE 88
L+V+D+ + +++ SMIL G+ VEVA NGK AVD+F + F + +D++MP MDG E
Sbjct: 595 LLVEDNLVNQKLASMILTKAGYNVEVAANGKIAVDMFSSTPDLFDTILMDVQMPEMDGYE 654
Query: 89 ATKAMRAMKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
AT+ +R + S I+ +T+ + +RE+ ++AG++ TKP+
Sbjct: 655 ATRQIRKLGYTSIPILAMTANAMKGDRELCLEAGMNDYITKPI 697
Score = 38.5 bits (88), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 42/89 (47%), Gaps = 4/89 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR----TGAKFHIVFIDMEMPVMD 85
L+VDD+ I +L + G K + + + + GA F + ID++MP +
Sbjct: 444 LIVDDNAANNEILVHLLNNAGIKTTALLDETQTMATLKEAEECGAPFDLAIIDLQMPTIT 503
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETER 114
G E + +R ++S+ + + S TE+
Sbjct: 504 GFELARIIRESNLKSRDIPFLAYTSSTEK 532
>gi|271499646|ref|YP_003332671.1| integral membrane sensor hybrid histidine kinase [Dickeya dadantii
Ech586]
gi|270343201|gb|ACZ75966.1| integral membrane sensor hybrid histidine kinase [Dickeya dadantii
Ech586]
Length = 962
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 1/103 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ + L S+G++V A +G +A+D+ IV D+ MP MDG
Sbjct: 841 LVVDDHPINRRLLADQLGSLGYQVITANDGLDALDVLAKNP-VDIVLTDVNMPNMDGYRF 899
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R M ++GVT+ ER+ +QAG+D C +KP+T+
Sbjct: 900 TQRLREMGQTLPVIGVTANALAEERQRCLQAGMDNCLSKPVTL 942
>gi|386823377|ref|ZP_10110527.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Serratia plymuthica PRI-2C]
gi|386379715|gb|EIJ20502.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Serratia plymuthica PRI-2C]
Length = 956
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 1/103 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ S L S+G++V A +G +A+D+ IV D+ MP MDG
Sbjct: 831 LVVDDHPINRRLLSDQLSSLGYQVVTANDGVDALDVLSRNT-VDIVLTDVNMPNMDGYRL 889
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R ++GVT+ E++ M+AG+D C +KP+T+
Sbjct: 890 TQRLRQQHFTLPVIGVTANALAEEKQRCMEAGMDNCLSKPVTL 932
>gi|357168523|ref|XP_003581688.1| PREDICTED: histidine kinase CKI1-like [Brachypodium distachyon]
Length = 759
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-----RTGAK--------FHIVF 76
L+ +D+ +++ I +L +G VEVA +G AVD+F R G + +VF
Sbjct: 615 LMAEDNQVLQIIQERMLSQLGATVEVAGDGSRAVDMFIDALERAGVSEGHTVPLPYDLVF 674
Query: 77 IDMEMPVMDGIEATKAMR----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
+D +MP+MDG EATK +R K+ + IV +T+ E + +QAG+DL TKP+
Sbjct: 675 MDCQMPLMDGYEATKRIREEETHYKIHTPIVALTAHALEEDLHQTIQAGMDLHLTKPIQR 734
Query: 133 AKIVPLLEELQK 144
+IV L ++ K
Sbjct: 735 EQIVDALHQICK 746
>gi|114566853|ref|YP_754007.1| signal transduction histidine kinase-like protein [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|114337788|gb|ABI68636.1| PAS/PAC sensor hybrid histidine kinase [Syntrophomonas wolfei
subsp. wolfei str. Goettingen]
Length = 763
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 75/131 (57%), Gaps = 5/131 (3%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
+ S +A + KN F LVV+D+ + + + S +L+S G +VEVA NG EA++L
Sbjct: 515 AESNQAINQKADTEKNPSLFILVVEDNEVNQMVLSNLLRSQGHQVEVAANGVEALELLDK 574
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMK----VESKIVGVTSRNSETEREVFMQAGLDL 124
+ +VF+D+ MPVMDG+E T+ +R + I+ +T+ +RE F+ AG+D
Sbjct: 575 N-NYDLVFMDILMPVMDGLETTRRIREQEEITGFHIPIIAITAHAIHGDREKFLAAGMDD 633
Query: 125 CYTKPLTMAKI 135
KP+ M ++
Sbjct: 634 YLAKPVQMEEL 644
>gi|374301624|ref|YP_005053263.1| Hpt sensor hybrid histidine kinase [Desulfovibrio africanus str.
Walvis Bay]
gi|332554560|gb|EGJ51604.1| Hpt sensor hybrid histidine kinase [Desulfovibrio africanus str.
Walvis Bay]
Length = 600
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 78/136 (57%), Gaps = 6/136 (4%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
KKA ++P S L+V+D+ + + +L + G V VAENG+EAVD+ +
Sbjct: 331 KKATQLDSPDSGPEALSVLLVEDNKVNQLFTREMLLAEGHSVIVAENGQEAVDIL-ARQR 389
Query: 72 FHIVFIDMEMPVMDGIEATKAMR-----AMKVESKIVGVTSRNSETEREVFMQAGLDLCY 126
F IV +D++MPVMDG+EAT+ +R + + I+ +T+ + +RE F+QAG+
Sbjct: 390 FDIVLMDIQMPVMDGVEATRTIRDPSSAVLDHDVPIIALTAHAIKGDRERFIQAGMTDYL 449
Query: 127 TKPLTMAKIVPLLEEL 142
TKP+ K+ ++ L
Sbjct: 450 TKPVDFRKLFGIMTTL 465
>gi|381157023|ref|ZP_09866257.1| PAS domain S-box [Thiorhodovibrio sp. 970]
gi|380880886|gb|EIC22976.1| PAS domain S-box [Thiorhodovibrio sp. 970]
Length = 790
Score = 75.1 bits (183), Expect = 9e-12, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 74/123 (60%), Gaps = 8/123 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+P+ ++ +M+L +G+ A NG++A+D + F +VF+D+ MP MDG+EA
Sbjct: 669 LVVDDEPINAKVVTMMLGKMGYTASSAVNGRQALDAL-SEQPFDLVFMDISMPDMDGVEA 727
Query: 90 TKAMRA-----MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL-- 142
T+ +RA + + I+ +T+ + +RE F+ AG+D KP+ + +++ +
Sbjct: 728 TRQIRANVAGNLDPSTPIIALTAHAMKGDRERFLAAGMDDYLPKPVEAKALREVMQRVLA 787
Query: 143 QKN 145
Q+N
Sbjct: 788 QRN 790
>gi|258516849|ref|YP_003193071.1| response regulator receiver protein [Desulfotomaculum acetoxidans
DSM 771]
gi|257780554|gb|ACV64448.1| response regulator receiver protein [Desulfotomaculum acetoxidans
DSM 771]
Length = 135
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P +R + ++I++ G KV A+NGKEAVD+ +V +D+ MPVM G+EA
Sbjct: 8 LVVDDQPGVRYLLNIIIEEEGHKVYTAQNGKEAVDMISL-VHPELVLMDVRMPVMGGLEA 66
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
K ++ + ++++V +T+ +E E MQ G C KP + +I L++ N
Sbjct: 67 LKIIKKISPDTEVVMMTAYGAEDTVEAAMQNGALTCIAKPFDIEEIKNFLKQYVWN 122
>gi|407000228|gb|EKE17601.1| hypothetical protein ACD_10C00372G0002 [uncultured bacterium]
Length = 749
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 17/149 (11%)
Query: 3 IGAEGASSSKKARISENPVSKNRPYFA---------LVVDDDPMIRR-IHSMILKSVGFK 52
I AE + ++A +NP + P A LVV+D+ R I +M+ K G +
Sbjct: 590 ISAEKLADGEEAN-PDNPTEEGEPVVAKSPTETVLVLVVEDNKTNRMVIQAMLKKQSGIR 648
Query: 53 VEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTS 107
VE E+G+EAV G+ H++ +D +MPVMDG EAT+ +RA + E+ I+ +T+
Sbjct: 649 VETVEDGQEAVTHVMQGSTPHLILMDCQMPVMDGYEATRQIRAWEAETGQARIPIIALTA 708
Query: 108 RNSETEREVFMQAGLDLCYTKPLTMAKIV 136
+RE + AG+D TKP+ AKI+
Sbjct: 709 GAFGKDRENALAAGMDDFLTKPID-AKIL 736
>gi|116666739|pdb|2AYX|A Chain A, Solution Structure Of The E.Coli Rcsc C-Terminus (Residues
700-949) Containing Linker Region And Phosphoreceiver
Domain
Length = 254
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI-- 74
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ +K HI
Sbjct: 120 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL---SKNHIDI 176
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
V D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 177 VLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 234
>gi|406934887|gb|EKD69023.1| sensory box sensor histidine kinase/response regulator [uncultured
bacterium]
Length = 601
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 44/125 (35%), Positives = 76/125 (60%), Gaps = 8/125 (6%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP L+V+DD + ++ ++L +G+K++ A NG+EAV+L+ G +F V +D +MP M
Sbjct: 476 RPLNVLLVEDDFINQKFMKVLLTRIGWKIQTANNGREAVNLYEPG-RFDAVIMDGQMPEM 534
Query: 85 DGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G EAT A+R ++ I+ +T+ + +R+ F+ AG+D +KP+ KI L+
Sbjct: 535 SGFEATTAIREIEKTRGAGRVPIIALTAYAMKGDRDKFISAGMDDYISKPVQNEKI--LI 592
Query: 140 EELQK 144
E L+K
Sbjct: 593 EILRK 597
>gi|383789521|ref|YP_005474095.1| signal transduction histidine kinase [Spirochaeta africana DSM
8902]
gi|383106055|gb|AFG36388.1| signal transduction histidine kinase [Spirochaeta africana DSM
8902]
Length = 642
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/117 (37%), Positives = 72/117 (61%), Gaps = 6/117 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +DD + +R+ + IL++ G VE ENG++A+ + TG + +V +D++MP MDG++A
Sbjct: 517 LVAEDDRINQRVITAILRAQGCVVETVENGRQALSVLETG-DYDLVLMDLQMPEMDGLQA 575
Query: 90 TKAMR--AMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
T+ +R A V IV VT+ SE +R M AG+D KP++ AK++ + E
Sbjct: 576 TQIIRDPASPVRDHSIPIVAVTAFASELDRTACMDAGMDGFLGKPISAAKLLQTIRE 632
>gi|302413031|ref|XP_003004348.1| sensory/regulatory protein rpfC [Verticillium albo-atrum VaMs.102]
gi|261356924|gb|EEY19352.1| sensory/regulatory protein rpfC [Verticillium albo-atrum VaMs.102]
Length = 1121
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/129 (31%), Positives = 77/129 (59%), Gaps = 9/129 (6%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT----GAKFHIVFI 77
+K + L+VDD+P+ ++ + +++ + A NG EAV+L+ G F +VF+
Sbjct: 972 TKQKSLHLLLVDDNPINIKLLTTVIRKMNHTFATASNGLEAVELYEKSLGEGRLFDLVFM 1031
Query: 78 DMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MPVM+G EAT+ +R ++ + KIV +T +S ++R+ + +G D+ TKP+ +
Sbjct: 1032 DISMPVMNGFEATREIRRLEGRAGAIRCKIVVLTGLSSASDRKEAVASGSDMFLTKPVKL 1091
Query: 133 AKIVPLLEE 141
K+ +L++
Sbjct: 1092 GKVREVLDQ 1100
>gi|260768445|ref|ZP_05877379.1| signal transduction histidine kinase [Vibrio furnissii CIP 102972]
gi|260616475|gb|EEX41660.1| signal transduction histidine kinase [Vibrio furnissii CIP 102972]
Length = 577
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Query: 8 ASSSKKARISENPVSKNRPYFAL-------VVDDDPMIRRIHSMILKSVGFKVEVAENGK 60
+ SS+ + + E P+S + AL VV+D + + ++L +G+ V +A NG+
Sbjct: 431 SRSSETSHLDELPLSHTASHRALDDTKHILVVEDTKTNQMVIQLLLNRMGYNVTLANNGQ 490
Query: 61 EAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQA 120
A++L F ++F+D+ MP+MDGI+AT+ +R+ K+ + I+ +T+ ++ E + A
Sbjct: 491 HAIELVEKDRTFDLIFMDISMPIMDGIQATRILRSRKLATPIIALTAHAMNSDHENCLAA 550
Query: 121 GLDLCYTKPL 130
G++ KP+
Sbjct: 551 GMNDIVLKPI 560
>gi|330806226|ref|XP_003291073.1| hypothetical protein DICPUDRAFT_98891 [Dictyostelium purpureum]
gi|325078753|gb|EGC32387.1| hypothetical protein DICPUDRAFT_98891 [Dictyostelium purpureum]
Length = 793
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 69/113 (61%), Gaps = 6/113 (5%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
K+RP L+V+D+ + ++ S +++ F VEVA NG+ A+D+FR ++ +V +DM MP
Sbjct: 619 KHRP-LVLLVEDNQLQIKVISKVMERYNFDVEVASNGQMALDMFRANPRYELVLMDMIMP 677
Query: 83 VMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+MDG+ AT +R + E + ++ T+ + E+ + + + AG D TKPL
Sbjct: 678 IMDGLTATMLIREYERERGLKRTPVIIQTADSRESHKLICLAAGCDDFMTKPL 730
>gi|443474974|ref|ZP_21064938.1| multi-sensor hybrid histidine kinase [Pseudanabaena biceps PCC 7429]
gi|443020231|gb|ELS34214.1| multi-sensor hybrid histidine kinase [Pseudanabaena biceps PCC 7429]
Length = 1137
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/133 (27%), Positives = 81/133 (60%), Gaps = 2/133 (1%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
A I + +K P L+ +D+P+ ++I ++L+++G+ V ENG++A++ A +
Sbjct: 879 APILDANFAKRYPLKILIAEDNPINQKILWLMLETLGYNVASVENGQKALNAIANNA-YD 937
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESK-IVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
++F+D++MP+MDG+ A+K +R M + I+G+++ ++ + +G+D TKPL
Sbjct: 938 LIFMDIQMPIMDGLTASKNIRLMSIHQPWIIGLSANAFVESYDLALASGMDDYLTKPLQT 997
Query: 133 AKIVPLLEELQKN 145
A ++ L+ + ++
Sbjct: 998 ASLIAALQRIPQH 1010
>gi|39726371|gb|AAR30128.1| putative histidine kinase M2BTp [Gibberella moniliformis]
Length = 1103
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 74/120 (61%), Gaps = 7/120 (5%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR-TGAKFHIVFIDMEMPVM 84
P F L+V+D+P+ ++ + ++ + A NG+EAV+ F+ T +F V +D+ MPVM
Sbjct: 983 PQF-LLVEDNPINLKMLTHFMRKLQKPYRTAVNGQEAVNAFKETPGQFKCVLMDISMPVM 1041
Query: 85 DGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
DG+EAT+ +RA + SKI+ +T SE+ RE ++G+D+ TKP+ + ++ ++
Sbjct: 1042 DGLEATRQIRAFERYSGIAASKILAITGLGSESTREEATRSGVDVFITKPIKLRELAVII 1101
>gi|443896131|dbj|GAC73475.1| sensory transduction histidine kinase [Pseudozyma antarctica T-34]
Length = 1628
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
Query: 2 MIGAEGASSSKKAR-ISENPVSKN--RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAEN 58
M+G +S+++ R + PV + P L+V+D+P+ +RI SM ++ K +VA N
Sbjct: 1289 MMGMGFTASARRGRGPKKAPVREAVLPPIKVLIVEDNPINQRILSMFMRKKSIKYDVANN 1348
Query: 59 GKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKI 102
G+EAVD + TG +H++ +D+++PVMDGIEATK +R ++ ++ I
Sbjct: 1349 GREAVDKWNTGG-YHLILMDIQLPVMDGIEATKEIRKLERQANI 1391
>gi|422334299|ref|ZP_16415306.1| sensor kinase RcsC [Escherichia coli 4_1_47FAA]
gi|373244686|gb|EHP64166.1| sensor kinase RcsC [Escherichia coli 4_1_47FAA]
Length = 246
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI-- 74
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ +K HI
Sbjct: 112 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL---SKNHIDI 168
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
V D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 169 VLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 226
>gi|392549915|ref|ZP_10297052.1| multi-sensor hybrid histidine kinase [Pseudoalteromonas spongiae
UST010723-006]
Length = 766
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 3/112 (2%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P N L+V+D+ + + I S ILK G+ E+AENG++A+D+ + F I+ +D+
Sbjct: 630 PCRNNSNIRVLLVEDNKINQTIASTILKGFGYYFEIAENGQQAIDIISNNS-FDIILMDI 688
Query: 80 EMPVMDGIEATKAMRA--MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKP 129
+MP++DGIEATK +R K I+ +T+ +E E E ++ G++ +KP
Sbjct: 689 QMPILDGIEATKILRNSYSKEALPIIALTANVTEAEVEKYLAIGMNAHLSKP 740
>gi|334119412|ref|ZP_08493498.1| CheA signal transduction histidine kinase [Microcoleus vaginatus
FGP-2]
gi|333458200|gb|EGK86819.1| CheA signal transduction histidine kinase [Microcoleus vaginatus
FGP-2]
Length = 953
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 85/146 (58%), Gaps = 5/146 (3%)
Query: 2 MIGAEGASSSKKA---RISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAEN 58
++G G +SS A ++ E P S ++ LVVDD IR++ S+ L ++V A++
Sbjct: 802 LVGQPGVNSSIAAVSGKVQEIPASSSQSPQILVVDDSYTIRQLLSLTLTRARYRVVQAKD 861
Query: 59 GKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKI--VGVTSRNSETEREV 116
G +A++ + G + +D+EMP MDG E +++R+ + +KI +TSR+ E R++
Sbjct: 862 GVDALEKLQNGLACSLAIVDIEMPRMDGFELLRSIRSTERFAKIPVAMLTSRSGEKHRQM 921
Query: 117 FMQAGLDLCYTKPLTMAKIVPLLEEL 142
M+ G + +TKP + A+++ + +L
Sbjct: 922 AMELGANQYFTKPYSEAQLLQAIPKL 947
>gi|313683147|ref|YP_004060885.1| response regulator receiver and hpt phospho transfer protein
[Sulfuricurvum kujiense DSM 16994]
gi|313156007|gb|ADR34685.1| response regulator receiver and Hpt phospho transfer protein
[Sulfuricurvum kujiense DSM 16994]
Length = 333
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGIE 88
L VDD+ + R + + + VG +V+ A++G EAVDLF + FHI+ +D++MPVM+G E
Sbjct: 16 LFVDDNELSREVAVRMFQKVGIEVKTAQDGNEAVDLFLSKPDYFHIILMDLQMPVMNGYE 75
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
A + +R I+ +++ + +RE ++AG++ KP+ M ++ ++
Sbjct: 76 AARIIRKHDASIPIIALSAAFMDDDREKVLEAGMNDNLGKPIDMYRLFNMI 126
>gi|170767641|ref|ZP_02902094.1| sensor histidine kinase/response regulator RcsC [Escherichia
albertii TW07627]
gi|170123975|gb|EDS92906.1| sensor histidine kinase/response regulator RcsC [Escherichia
albertii TW07627]
Length = 933
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+IG E + ++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 784 LIGMESDDPAHSLPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 843
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 844 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 902
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 903 MDSCLSKPVTL 913
>gi|330445983|ref|ZP_08309635.1| sensory box protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
gi|328490174|dbj|GAA04132.1| sensory box protein [Photobacterium leiognathi subsp. mandapamensis
svers.1.1.]
Length = 700
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMPVMDGIE 88
L+ +D + + ++L+ G KV + NGKEA+++ G KF +V +D+ MPV+DG+E
Sbjct: 574 LLAEDSNTNQLVAKLMLERRGHKVAITNNGKEAINVLLQGHNKFDLVLMDISMPVLDGLE 633
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
ATK +R ++ IV +T+ +++++++ + G+D KP+ ++ LLE+ Q+
Sbjct: 634 ATKQLRKREISIPIVALTANAMQSDQKIYHEIGMDGFLAKPICSNELDQLLEKYQE 689
>gi|420332115|ref|ZP_14833771.1| response regulator [Shigella flexneri K-1770]
gi|391251010|gb|EIQ10229.1| response regulator [Shigella flexneri K-1770]
Length = 249
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI-- 74
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ +K HI
Sbjct: 115 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL---SKNHIDI 171
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
V D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 172 VLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 229
>gi|88704190|ref|ZP_01101904.1| two-component system sensor histidine kinase/response regulator,
hybrid [Congregibacter litoralis KT71]
gi|88701241|gb|EAQ98346.1| two-component system sensor histidine kinase/response regulator,
hybrid [Congregibacter litoralis KT71]
Length = 1476
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 74/118 (62%), Gaps = 6/118 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D + ++I +L S+G KV++A NG+EAVDLF+ +K+ ++F+D +MP++DG A
Sbjct: 1218 LVVEDVAVNQQIAMTMLHSLGAKVQLAGNGEEAVDLFQK-SKYDLIFMDCQMPILDGYAA 1276
Query: 90 TKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ +R ++ E + I+ +T+ + +++ + AG++ TKP T + LE
Sbjct: 1277 TQRIRKIEQERGLPRTTIIALTAGGDQGDKQRALDAGMNGLLTKPFTTHDLRKALESF 1334
>gi|332531837|ref|ZP_08407722.1| sensory box histidine kinase/response regulator [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038813|gb|EGI75255.1| sensory box histidine kinase/response regulator [Pseudoalteromonas
haloplanktis ANT/505]
Length = 1046
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/127 (33%), Positives = 73/127 (57%), Gaps = 2/127 (1%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P K + ALVVDD+ + + I S +L + V +A+NG++A+D T I+F+D+
Sbjct: 731 PHPKFSGFNALVVDDNKINQEIASALLARLDMTVNIADNGRDALDKIETN-NIDIIFMDV 789
Query: 80 EMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
+MPVMDG+EAT +R ++ I+ +T+ +++ +AG+D KP+ + +
Sbjct: 790 QMPVMDGLEATSILRERGYKTPIIAITAAADPNDKKAAFRAGMDDFLVKPIIFDSLYESI 849
Query: 140 EE-LQKN 145
E+ LQ N
Sbjct: 850 EKHLQSN 856
>gi|423758172|ref|ZP_17712372.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
protein, partial [Vibrio cholerae HC-50A2]
gi|408637584|gb|EKL09623.1| histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family
protein, partial [Vibrio cholerae HC-50A2]
Length = 152
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 64/106 (60%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
+ + LVV+D + + ++L +G+ V +AENG +AV+L F +V +D+ MP+M
Sbjct: 32 KNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIM 91
Query: 85 DGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
DGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 92 DGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPI 137
>gi|375130982|ref|YP_004993082.1| sensor histidine kinase/response regulator [Vibrio furnissii NCTC
11218]
gi|315180156|gb|ADT87070.1| sensor histidine kinase/response regulator [Vibrio furnissii NCTC
11218]
Length = 579
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 75/130 (57%), Gaps = 7/130 (5%)
Query: 8 ASSSKKARISENPVSKNRPYFAL-------VVDDDPMIRRIHSMILKSVGFKVEVAENGK 60
+ SS+ + + E P+S + AL VV+D + + ++L +G+ V +A NG+
Sbjct: 431 SRSSETSHLDELPLSHTASHRALDDTKHILVVEDTKTNQMVIQLLLNRMGYNVTLANNGQ 490
Query: 61 EAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQA 120
A++L F ++F+D+ MP+MDGI+AT+ +R+ K+ + I+ +T+ ++ E + A
Sbjct: 491 HAIELVEKDRTFDLIFMDISMPIMDGIQATRILRSRKLATPIIALTAHAMNSDHENCLAA 550
Query: 121 GLDLCYTKPL 130
G++ KP+
Sbjct: 551 GMNDIVLKPI 560
>gi|116666741|pdb|2AYZ|A Chain A, Solution Structure Of The E.Coli Rcsc C-Terminus (Residues
817-949) Containing Phosphoreceiver Domain
Length = 133
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Query: 21 VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI--VFID 78
VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ +K HI V D
Sbjct: 3 VSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL---SKNHIDIVLSD 59
Query: 79 MEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+ I
Sbjct: 60 VNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLDVI 116
>gi|119898866|ref|YP_934079.1| putative two-component hybrid sensor and regulator [Azoarcus sp.
BH72]
gi|119671279|emb|CAL95192.1| putative two-component hybrid sensor and regulator [Azoarcus sp.
BH72]
Length = 831
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/112 (37%), Positives = 67/112 (59%), Gaps = 12/112 (10%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+P+ + + S +L+ VG KV V NG EA++ F G F +V +D++MPVM GIEA
Sbjct: 573 LLVEDNPVNQTVASRMLERVGHKVTVVNNGAEAIEAFDAG-HFDLVLMDLQMPVMGGIEA 631
Query: 90 TKAMRAMKVESK-----------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+A+RA + IV +T+ E++R ++AG+D KP+
Sbjct: 632 TQAIRAREARRSWAVQGGWRAVPIVAMTAHAMESDRARCLEAGMDDYVAKPI 683
>gi|189426004|ref|YP_001953181.1| multi-sensor hybrid histidine kinase [Geobacter lovleyi SZ]
gi|189422263|gb|ACD96661.1| multi-sensor hybrid histidine kinase [Geobacter lovleyi SZ]
Length = 1127
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 70/116 (60%), Gaps = 3/116 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT-GAKFHIVFIDMEMPVMDGIE 88
LV +D P+ R+I IL++VG +VE A NG+EAV + G + ++ +D++MP+MDG E
Sbjct: 790 LVTEDHPINRQIAREILEAVGVQVETANNGREAVAAMQDHGDRIDLILMDIQMPIMDGYE 849
Query: 89 ATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
AT+ +R ++ I+ +T+ ERE + +G++ KP+ + K+ LL L
Sbjct: 850 ATREIRRRYSRNRLPIIAMTAHALTEERERCLSSGMNEHLAKPIAVEKLYELLARL 905
>gi|333895131|ref|YP_004469006.1| sensory box histidine kinase/response regulator [Alteromonas sp.
SN2]
gi|332995149|gb|AEF05204.1| sensory box histidine kinase/response regulator [Alteromonas sp.
SN2]
Length = 861
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 67/109 (61%), Gaps = 2/109 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D+P+ +++ +LKS G V+ AENG+E +DL +G K H++ +DM+MP+M G+EA
Sbjct: 743 LVVEDNPINQQVAGAMLKSAGAVVKFAENGQECLDLLLSGFKPHLILMDMQMPIMGGVEA 802
Query: 90 TKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
+ +RA I+ +T+ E +R+ + AG+ KP+ ++
Sbjct: 803 AEHIRANSTWDNIPILAMTANAMEADRKRCIDAGMQGHIVKPVVKQDLI 851
>gi|254419505|ref|ZP_05033229.1| MASE1 domain family [Brevundimonas sp. BAL3]
gi|196185682|gb|EDX80658.1| MASE1 domain family [Brevundimonas sp. BAL3]
Length = 683
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 72/121 (59%), Gaps = 4/121 (3%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E P+ + R LVVDD P R + ++L++V + A +G+EAV+ RTG F +V +
Sbjct: 543 ETPLLEARRMRVLVVDDHPANRDLLRIMLQAVDCETAEACDGREAVEAVRTG-DFDLVLM 601
Query: 78 DMEMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
D+ MPVMDG+ AT+A+RA++ + I+ VT+ + + AG+D KP+T A+
Sbjct: 602 DIRMPVMDGVAATRAIRALEGPAAGTAILAVTAEAMPEDVARCLSAGMDAHVAKPVTQAR 661
Query: 135 I 135
+
Sbjct: 662 L 662
>gi|423065336|ref|ZP_17054126.1| PAS/PAC sensor hybrid histidine kinase [Arthrospira platensis C1]
gi|406713246|gb|EKD08418.1| PAS/PAC sensor hybrid histidine kinase [Arthrospira platensis C1]
Length = 885
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 84/136 (61%), Gaps = 5/136 (3%)
Query: 5 AEGAS-SSKKARISENPVSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
AE A+ +S+K+ +++N+P Y LVVDD+ R++ +L +GF V AENG+EA
Sbjct: 643 AEAATRNSEKSPGRAIALAENQPEYRILVVDDNWTNRKLVVKLLNPLGFHVREAENGQEA 702
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAM-RAMKVESK-IVGVTSRNSETEREVFMQA 120
+ ++ K H++F+DM MPVMDG EAT+ + R +K ++ I+ +T+ + E+ + + A
Sbjct: 703 IAIWEEW-KPHLIFMDMRMPVMDGYEATQLIKRHLKGQATVIIALTASALQQEKSIVLSA 761
Query: 121 GLDLCYTKPLTMAKIV 136
G D KP + +++
Sbjct: 762 GCDDFVRKPFRVDQLL 777
>gi|209523774|ref|ZP_03272327.1| PAS/PAC sensor hybrid histidine kinase [Arthrospira maxima CS-328]
gi|209495806|gb|EDZ96108.1| PAS/PAC sensor hybrid histidine kinase [Arthrospira maxima CS-328]
Length = 885
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 84/136 (61%), Gaps = 5/136 (3%)
Query: 5 AEGAS-SSKKARISENPVSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
AE A+ +S+K+ +++N+P Y LVVDD+ R++ +L +GF V AENG+EA
Sbjct: 643 AEAATRNSEKSPGRAIALAENQPEYRILVVDDNWTNRKLVVKLLNPLGFHVREAENGQEA 702
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAM-RAMKVESK-IVGVTSRNSETEREVFMQA 120
+ ++ K H++F+DM MPVMDG EAT+ + R +K ++ I+ +T+ + E+ + + A
Sbjct: 703 IAIWEEW-KPHLIFMDMRMPVMDGYEATQLIKRHLKGQATVIIALTASALQQEKSIVLSA 761
Query: 121 GLDLCYTKPLTMAKIV 136
G D KP + +++
Sbjct: 762 GCDDFVRKPFRVDQLL 777
>gi|121728449|ref|ZP_01681475.1| sensor histidine kinase/response regulator [Vibrio cholerae V52]
gi|121629273|gb|EAX61708.1| sensor histidine kinase/response regulator [Vibrio cholerae V52]
Length = 406
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/119 (30%), Positives = 69/119 (57%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 273 KQSASSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 332
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 333 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPI 391
>gi|376005321|ref|ZP_09782835.1| Signal transduction histidine kinase [Arthrospira sp. PCC 8005]
gi|375326248|emb|CCE18588.1| Signal transduction histidine kinase [Arthrospira sp. PCC 8005]
Length = 885
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 48/136 (35%), Positives = 84/136 (61%), Gaps = 5/136 (3%)
Query: 5 AEGAS-SSKKARISENPVSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
AE A+ +S+K+ +++N+P Y LVVDD+ R++ +L +GF V AENG+EA
Sbjct: 643 AEAATRNSEKSPGRAIALAENQPEYRILVVDDNWTNRKLVVKLLNPLGFHVREAENGQEA 702
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAM-RAMKVESK-IVGVTSRNSETEREVFMQA 120
+ ++ K H++F+DM MPVMDG EAT+ + R +K ++ I+ +T+ + E+ + + A
Sbjct: 703 IAIWEEW-KPHLIFMDMRMPVMDGYEATQLIKRHLKGQATVIIALTASALQQEKSIVLSA 761
Query: 121 GLDLCYTKPLTMAKIV 136
G D KP + +++
Sbjct: 762 GCDDFVRKPFRVDQLL 777
>gi|158333667|ref|YP_001514839.1| two-component hybrid histidine kinase sensor and regulator
[Acaryochloris marina MBIC11017]
gi|158303908|gb|ABW25525.1| two-component hybrid histidine kinase sensor and regulator
[Acaryochloris marina MBIC11017]
Length = 768
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 49/138 (35%), Positives = 82/138 (59%), Gaps = 6/138 (4%)
Query: 3 IGAEGASSSKKARISENPV---SKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAEN 58
I E + ISE V ++N P Y LVV+D P R I M+L+ VGF+V+ A N
Sbjct: 536 IQVESGEPVLEPAISETTVEGLAENTPSYRVLVVEDYPDNREILLMMLEVVGFEVKEAVN 595
Query: 59 GKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK-IVGVTSRNSETEREVF 117
G+EAVDL RT H++++D+++PV++G+EAT+ +++ I+ +T++ E++
Sbjct: 596 GQEAVDLNRTWQP-HLIWMDLQLPVLNGLEATQLIKSQNPNPPVIIAITAQALESDEVKA 654
Query: 118 MQAGLDLCYTKPLTMAKI 135
++AG D KP A++
Sbjct: 655 LKAGCDDYLRKPYQAAQV 672
>gi|116623865|ref|YP_826021.1| histidine kinase [Candidatus Solibacter usitatus Ellin6076]
gi|116227027|gb|ABJ85736.1| histidine kinase [Candidatus Solibacter usitatus Ellin6076]
Length = 1358
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 46/128 (35%), Positives = 75/128 (58%), Gaps = 6/128 (4%)
Query: 11 SKKARISENPVSKNRPYF-ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
+++ RI+ + +P F LV +D+P + L+S GF+V+VA+NG + VDLF+T
Sbjct: 1128 TERGRITG--LEPGQPEFRVLVCEDEPTSAAVLLRFLQSAGFQVKVADNGAKGVDLFQTW 1185
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYT 127
+ +++D+ MPVM+G EA K +RA++ KI GV++ ER + AG+D
Sbjct: 1186 -RPDFIWMDLRMPVMNGAEAAKRIRAVEGGRAVKIAGVSASAFAEERSEVLAAGMDDFVR 1244
Query: 128 KPLTMAKI 135
KP A+I
Sbjct: 1245 KPFRAAEI 1252
>gi|256829193|ref|YP_003157921.1| PAS/PAC sensor hybrid histidine kinase [Desulfomicrobium baculatum
DSM 4028]
gi|256578369|gb|ACU89505.1| PAS/PAC sensor hybrid histidine kinase [Desulfomicrobium baculatum
DSM 4028]
Length = 778
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 77/134 (57%), Gaps = 7/134 (5%)
Query: 14 ARISENP-VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF 72
AR+ E ++ + L+V+DDP + +L+ G V +AENG+EA+DL RTG F
Sbjct: 634 ARMREKADITGRKTMHVLMVEDDPSNQVATRKLLEKSGHAVTLAENGQEALDLLRTG-DF 692
Query: 73 HIVFIDMEMPVMDGIEATKAMR-----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYT 127
IV +D++MPVM G EATK +R A ++ +T+ +RE F+ +G+D
Sbjct: 693 DIVLMDIQMPVMGGQEATKEIRNSPGLAACKSIPVIALTAYAMTGDREKFLASGMDDYLV 752
Query: 128 KPLTMAKIVPLLEE 141
KP+++ + ++E+
Sbjct: 753 KPVSLENLQRMIEK 766
>gi|409041218|gb|EKM50704.1| hypothetical protein PHACADRAFT_188239 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1134
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/136 (32%), Positives = 69/136 (50%), Gaps = 26/136 (19%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL------------------------ 65
LVVDDDP+ R++ S +L +G KV AENG+ A+DL
Sbjct: 977 LVVDDDPLTRKLMSRMLTRLGCKVTTAENGEIALDLILNPAARPTPSSEDTGSSGLVSND 1036
Query: 66 --FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLD 123
T ++ +VF+D +MPVM G+EA +R + +VGVT T+++ ++ AG+D
Sbjct: 1037 GQLTTDERYAVVFLDNQMPVMSGLEAVAKLRRRGRKDFVVGVTGNALLTDQQEYLDAGVD 1096
Query: 124 LCYTKPLTMAKIVPLL 139
TKP+ + +L
Sbjct: 1097 HVLTKPVLEKSLKAML 1112
>gi|392405380|ref|YP_006441992.1| response regulator receiver protein [Turneriella parva DSM 21527]
gi|390613334|gb|AFM14486.1| response regulator receiver protein [Turneriella parva DSM 21527]
Length = 118
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 70/113 (61%), Gaps = 1/113 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L VDD +R I S L+S G +V +AE G++A+ F++G +F ++ D+ MPVMDG
Sbjct: 5 LAVDDSEPMRAIVSQALRSGGHEVTLAEEGEDALTKFKSG-EFDLIITDINMPVMDGYAF 63
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
KA+RA+ + I+ +T+ E++R+ AG+D KP+ A+ + +++++
Sbjct: 64 VKAVRALNGDIPILALTTEGQESQRKAGEDAGVDGWIVKPIKPAQFLAIVKQI 116
>gi|334705873|ref|ZP_08521739.1| hybrid sensory histidine kinase BarA [Aeromonas caviae Ae398]
Length = 906
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L VDD+ ++ + +LK + +V V +NGKEAV+L ++ F I+F+D++MPVMDGI A
Sbjct: 668 LAVDDNAANLKLIAAMLKEMVTEVVVCKNGKEAVNLAQS-QPFDIIFMDIQMPVMDGISA 726
Query: 90 TKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+A+R ++ E+ IV VT+ ERE ++ G+D KP+ + L+ +
Sbjct: 727 TQAIRHHSLNTETPIVAVTAHAIPGERERLIRQGMDDYLAKPIDEGMLAQLITDF 781
>gi|262165686|ref|ZP_06033423.1| signal transduction histidine kinase [Vibrio mimicus VM223]
gi|262025402|gb|EEY44070.1| signal transduction histidine kinase [Vibrio mimicus VM223]
Length = 573
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/132 (28%), Positives = 77/132 (58%), Gaps = 2/132 (1%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
A + ++ ++KN + LVV+D + + ++L +G+ V +AENG EA++L F
Sbjct: 441 AYLKQSTIAKN--HHILVVEDTKTNQMVIQLLLNKMGYDVTIAENGLEAIELLEKSNAFD 498
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+V +D+ MP+MDGI AT+ +R+ ++ I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 LVLMDISMPIMDGIMATRKIRSQDIDIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRGK 558
Query: 134 KIVPLLEELQKN 145
I+ ++ N
Sbjct: 559 DIMNVVNRFLPN 570
>gi|413933250|gb|AFW67801.1| putative histidine kinase family protein [Zea mays]
Length = 966
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 54/84 (64%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + R+ + LK G KVE E+GK+A+ L + KFH+ +D++MP MDG EA
Sbjct: 824 LVVDDNKVNLRVAAGTLKKFGAKVECVESGKDALALLQVPYKFHLCLMDIQMPEMDGFEA 883
Query: 90 TKAMRAMKVESKIVGVTSRNSETE 113
TK +RAM+ ++ V NSE +
Sbjct: 884 TKQIRAMEAKANEQAVACDNSEID 907
>gi|323446885|gb|EGB02893.1| hypothetical protein AURANDRAFT_34765 [Aureococcus anophagefferens]
gi|323452096|gb|EGB07971.1| hypothetical protein AURANDRAFT_26825 [Aureococcus anophagefferens]
Length = 427
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 18/131 (13%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-----RTGAK----------FH 73
ALVVDD R++ + ++ +GF+VE+AE+G EAV RTG F
Sbjct: 295 ALVVDDVSSNRKLIAFHVRKLGFEVELAEDGAEAVAAHSRKRARTGGGAAPQDAADDGFD 354
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
++ +D MPVM+G++AT+A+RA ++ IVGVT + F+ AG + TKP+++A
Sbjct: 355 LILMDSVMPVMNGLDATRAIRAAGCDALIVGVTGNALAEDIAAFVAAGANCVVTKPVSVA 414
Query: 134 KIVPLLEELQK 144
+ L +EL K
Sbjct: 415 Q---LKDELAK 422
>gi|269966474|ref|ZP_06180558.1| putative histidine kinase [Vibrio alginolyticus 40B]
gi|269828931|gb|EEZ83181.1| putative histidine kinase [Vibrio alginolyticus 40B]
Length = 1060
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 83/141 (58%), Gaps = 8/141 (5%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E +SS++ + P+ R L+V+D+ + +++ S++L G++ EVAENG+ AV++
Sbjct: 921 ELPASSEQPEATVTPIRSER---ILLVEDNRVNQKVASLLLSKAGYQFEVAENGQIAVEM 977
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFMQA 120
F+ KF ++ +D MP+MDG EA++ +RA + ++ I+ +T+ + + + +
Sbjct: 978 FQKDGKFDVILMDCMMPIMDGFEASRQIRAYEASKGLAKTPIIALTASVVDDDIQRCFDS 1037
Query: 121 GLDLCYTKPLTMAKIVPLLEE 141
G+D KP+ K++ +E+
Sbjct: 1038 GMDAYVPKPVRKEKLLYQIEQ 1058
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + ++I + + GF +VA NG+EAV+ F+ ++ ++ +D MPVMDG EA
Sbjct: 779 LVVDDNTVNQKIAGLHVTKAGFDFDVAVNGQEAVEKFQQN-QYSLILMDCMMPVMDGFEA 837
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +R ++V+ K I+ +T+ + + + G+D KP
Sbjct: 838 TQIIRQIEVKEKRAFRIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 884
>gi|423704400|ref|ZP_17678825.1| sensor kinase RcsC [Escherichia coli H730]
gi|385706639|gb|EIG43678.1| sensor kinase RcsC [Escherichia coli H730]
Length = 187
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 71/118 (60%), Gaps = 5/118 (4%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI-- 74
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ +K HI
Sbjct: 53 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL---SKNHIDI 109
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
V D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 110 VLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 167
>gi|84386181|ref|ZP_00989210.1| hypothetical two-component sensor [Vibrio splendidus 12B01]
gi|84378951|gb|EAP95805.1| hypothetical two-component sensor [Vibrio splendidus 12B01]
Length = 809
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 80/132 (60%), Gaps = 7/132 (5%)
Query: 10 SSKKARISE--NPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
+ K+A I E PV+ + LVV+D + +++ M+LK +GF+V++A+NG+ V+ F+
Sbjct: 655 TDKQAPIKEEPKPVAASFSGKVLVVEDSRVNQQVAKMMLKKLGFEVDIADNGEIGVEKFQ 714
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLD 123
++ ++F+D +MPV+DG EATK +RA++ S IV +T+ + ++ + G+D
Sbjct: 715 AN-EYEMIFMDCQMPVLDGFEATKQIRALEEGSSQHIPIVALTANVVQRDKHLCFDVGMD 773
Query: 124 LCYTKPLTMAKI 135
KP+ K+
Sbjct: 774 EFLPKPVNQGKL 785
>gi|413933249|gb|AFW67800.1| putative histidine kinase family protein [Zea mays]
Length = 806
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 54/84 (64%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + R+ + LK G KVE E+GK+A+ L + KFH+ +D++MP MDG EA
Sbjct: 664 LVVDDNKVNLRVAAGTLKKFGAKVECVESGKDALALLQVPYKFHLCLMDIQMPEMDGFEA 723
Query: 90 TKAMRAMKVESKIVGVTSRNSETE 113
TK +RAM+ ++ V NSE +
Sbjct: 724 TKQIRAMEAKANEQAVACDNSEID 747
>gi|422922747|ref|ZP_16955924.1| his Kinase A domain protein [Vibrio cholerae BJG-01]
gi|341644959|gb|EGS69118.1| his Kinase A domain protein [Vibrio cholerae BJG-01]
Length = 570
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KQSTSSSQKIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLERNHA 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|153801730|ref|ZP_01956316.1| sensor histidine kinase/response regulator [Vibrio cholerae MZO-3]
gi|124122754|gb|EAY41497.1| sensor histidine kinase/response regulator [Vibrio cholerae MZO-3]
Length = 514
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 381 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 440
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 441 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 500
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 501 SKDIMEVVKRF 511
>gi|118579861|ref|YP_901111.1| multi-sensor hybrid histidine kinase [Pelobacter propionicus DSM
2379]
gi|118502571|gb|ABK99053.1| multi-sensor hybrid histidine kinase [Pelobacter propionicus DSM
2379]
Length = 785
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 79/130 (60%), Gaps = 9/130 (6%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
SE P ++ P L+ +D+P+ + + ++L+S+G KV+V NG++AV+ + ++ +VF
Sbjct: 653 SERPATQRTP-LVLLAEDNPVNQELGRLVLESLGCKVDVVGNGRQAVEAV-SDREYDLVF 710
Query: 77 IDMEMPVMDGIEATKAMRAMKVES-------KIVGVTSRNSETEREVFMQAGLDLCYTKP 129
+D +MP +DG EAT+++R + E+ ++ +T+ + +RE + AG+D +KP
Sbjct: 711 MDCQMPEVDGYEATRSIRQREAETGEQTRHIPVIALTAHAMDGDRETCLSAGMDDYASKP 770
Query: 130 LTMAKIVPLL 139
T ++ LL
Sbjct: 771 FTPIQLQALL 780
>gi|371777434|ref|ZP_09483756.1| histidine kinase [Anaerophaga sp. HS1]
Length = 129
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/109 (33%), Positives = 69/109 (63%), Gaps = 5/109 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + +++ ++ L GF++EVA NGKEA+D + + I+ +D+ MPVMDG+E
Sbjct: 7 LLVEDNVLNQKLINLTLSKYGFEIEVANNGKEALDKLKDN-HYDIILMDLMMPVMDGLET 65
Query: 90 TKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
T+ +R + E+ I+G+T+ + +R+ ++ G+D TKP + +
Sbjct: 66 TRLIREQEKETGSRNIIIGLTANTYDADRDKCLKGGMDEYMTKPFDIKQ 114
>gi|301057596|ref|ZP_07198676.1| PAS domain S-box protein [delta proteobacterium NaphS2]
gi|300448320|gb|EFK12005.1| PAS domain S-box protein [delta proteobacterium NaphS2]
Length = 1052
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 76/134 (56%), Gaps = 23/134 (17%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF---RTGAKFHIVFIDMEMPVMDG 86
L+ +D+P+ +++ ++LK G++VEVA NG+EA+++ R G FH++F+D++MP MDG
Sbjct: 914 LLAEDNPVNQKLAKIMLKKAGYQVEVANNGREAIEILMASRNG--FHLIFMDVQMPEMDG 971
Query: 87 IEATKAMRAMKVES------------------KIVGVTSRNSETEREVFMQAGLDLCYTK 128
AT+ +R ++ E I+ +T+ + +RE + AG+D TK
Sbjct: 972 FTATREIRRLESEHVLKPPQCTDFHASTIARIPIIAMTAHAMKGDREACIDAGMDDYITK 1031
Query: 129 PLTMAKIVPLLEEL 142
P+ + ++E+
Sbjct: 1032 PIKREGVFSIVEKW 1045
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 68/153 (44%), Gaps = 23/153 (15%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
G S +K AR PVS + AL+VDD+ +I + LK VG ++ + G + + L
Sbjct: 733 GKSETKAAR-PYTPVSLSGKK-ALLVDDNDTNLKILAAYLKPVGIRLVLLNKGVDVLPLL 790
Query: 67 RTGA----KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTS-------------RN 109
+ F I D++MP+M G E + +R ES + G+ + R
Sbjct: 791 ESAIGEQDPFDICITDIQMPIMSGYEVARQIRLF--ESPVSGLQTSIRSLPLMALSSVRG 848
Query: 110 SETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
+ +R + G D KP+ ++ +LE +
Sbjct: 849 QDAKR--CREVGFDGFLGKPIRRERLYRMLERI 879
>gi|149177515|ref|ZP_01856118.1| multi-sensor hybrid histidine kinase [Planctomyces maris DSM 8797]
gi|148843665|gb|EDL58025.1| multi-sensor hybrid histidine kinase [Planctomyces maris DSM 8797]
Length = 1129
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D P +++ + ILK G + +A+NG+EAVD R + F +V +D++MP MDG++A
Sbjct: 858 LVAEDTPANQKVINAILKKRGHQCVIADNGREAVDCLRNES-FDVVLMDVQMPTMDGLQA 916
Query: 90 TKAMR----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T +R V + I+ +T+ +R+ + AG+D +KP+ K++ +LE L
Sbjct: 917 TAMIRENEYGSGVHTPIIAMTAYAMRGDRDKCIAAGMDSYISKPIDAKKLILILERL 973
>gi|410611631|ref|ZP_11322726.1| two-component system, unclassified family, sensor histidine kinase
and response regulator [Glaciecola psychrophila 170]
gi|410168834|dbj|GAC36615.1| two-component system, unclassified family, sensor histidine kinase
and response regulator [Glaciecola psychrophila 170]
Length = 826
Score = 74.3 bits (181), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/135 (33%), Positives = 76/135 (56%), Gaps = 8/135 (5%)
Query: 13 KARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF 72
KA I E +S + LVVDD + R I +L+ G V AENG++A++ F+ F
Sbjct: 696 KATIPEAKLSG----YILVVDDSDINRIIAQFMLEGFGLTVATAENGQQALEQFQKHT-F 750
Query: 73 HIVFIDMEMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKP 129
++ +D EMP+MDG EA++ +R M+ + IV +T+ + R+ QAG+D +KP
Sbjct: 751 DMILMDCEMPIMDGYEASRTIRDMQSGEARAPIVALTANAYQENRKKCEQAGMDDFLSKP 810
Query: 130 LTMAKIVPLLEELQK 144
+ ++ +L++ K
Sbjct: 811 IMEEALLDILKKWLK 825
>gi|304319988|ref|YP_003853631.1| sensory box sensor histidine kinase/response regulator
[Parvularcula bermudensis HTCC2503]
gi|303298891|gb|ADM08490.1| sensory box sensor histidine kinase/response regulator
[Parvularcula bermudensis HTCC2503]
Length = 623
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
A+ + I EN RP L+VDD+ R + ++K +G + A +G++AVD+
Sbjct: 479 ANPASDRNIHEN---NGRPLNILIVDDNLANRMVAEALVKPLGATTQSAADGRQAVDMA- 534
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAM---KVESKIVGVTSRNSETEREVFMQAGLDL 124
+ +F I+F+D+ MPVMDG+ ATK +RA ++ IV +T+ E + +AGLD
Sbjct: 535 SKERFDIIFMDISMPVMDGMTATKMIRASDGPNAQTPIVALTAHMGTAEWDEIRRAGLDD 594
Query: 125 CYTKPLTMAKIVPLLEELQK 144
KP+ IV L++ K
Sbjct: 595 ILNKPVRRDMIVKCLDKWTK 614
>gi|224072598|ref|XP_002303799.1| predicted protein [Populus trichocarpa]
gi|222841231|gb|EEE78778.1| predicted protein [Populus trichocarpa]
Length = 431
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 45/110 (40%), Positives = 63/110 (57%), Gaps = 9/110 (8%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVG----FKVEVAE--NGKEAVDLFRTGAKFHIVFIDME 80
Y L+V DD R I + VG F +E E NGKEAV L GA F ++ +D +
Sbjct: 322 YSVLIVHDDRDARDIIWRYVMVVGTEKHFTLEFQEARNGKEAVYLHLAGASFDLIIMDDQ 381
Query: 81 MPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
MP+M GI+AT+ +R M V+S+I+G SE+ ++ F+ AG D C PL
Sbjct: 382 MPIMTGIQATQLLRKMGVKSQIIGFA---SESVQQAFIDAGADECLQMPL 428
>gi|301060701|ref|ZP_07201516.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [delta
proteobacterium NaphS2]
gi|300445098|gb|EFK09048.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [delta
proteobacterium NaphS2]
Length = 545
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD-LFRTGAKFHIVFIDMEM 81
K P L+ +D+ + +++ M+L GF+V++A NG+EAVD L + F +V +D++M
Sbjct: 418 KENPVRILIAEDNKVNQKLIKMMLTKEGFQVDIAANGQEAVDKLQESPENFDLVLMDIQM 477
Query: 82 PVMDGIEATKAMRAMKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
PV DG EATKA+R + I+ +T+ + RE + +G+D TKP+ +++ +E
Sbjct: 478 PVKDGFEATKAIREAGFHNLPIIAITAHALKGYREKCLASGMDDYVTKPIKKNEVISAIE 537
>gi|212554940|gb|ACJ27394.1| PAS domain protein [Shewanella piezotolerans WP3]
Length = 1203
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 77/126 (61%), Gaps = 4/126 (3%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+SE K+ Y L+V+D+ + +++ + +LKS G+ V+VAENG+ A+D+ + A + V
Sbjct: 1069 VSEESTDKDTGYI-LLVEDNFINQQVATELLKSAGYTVDVAENGQIALDMIDS-ANYDAV 1126
Query: 76 FIDMEMPVMDGIEATKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+D++MPVMDG+ ATK +R E ++ +T+ +RE + AG++ TKP+ +
Sbjct: 1127 LMDIQMPVMDGLTATKELRKRYSATELPVIAMTAHAMSGDREKSLSAGMNAHITKPIVLN 1186
Query: 134 KIVPLL 139
++ L
Sbjct: 1187 ELFETL 1192
Score = 40.4 bits (93), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 39/75 (52%), Gaps = 3/75 (4%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGI 87
LV+DD+P +I+S +++ F V+ A +G E L++ ++ +D MP MDGI
Sbjct: 938 TLVIDDNPTALQIYSSVMRDFHFSVDTAASGPEG--LYKLSKNPVDLLLLDWMMPEMDGI 995
Query: 88 EATKAMRAMKVESKI 102
+ + M K+
Sbjct: 996 AVIEEIDDMVASGKL 1010
>gi|315498336|ref|YP_004087140.1| response regulator receiver protein [Asticcacaulis excentricus CB
48]
gi|315416348|gb|ADU12989.1| response regulator receiver protein [Asticcacaulis excentricus CB
48]
Length = 150
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D+P + S+ L+ +G+ + ENG+EA++ F TG ++ ++ +D++MP MDG EA
Sbjct: 26 LVVEDNPANALVASLFLEQMGYAHDRVENGREALEAFETG-RYGLILMDLQMPEMDGYEA 84
Query: 90 TKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
++ +RA++ E+ IV +T+ +RE + AG++ +KP ++ LE L
Sbjct: 85 SRRIRALERETGRMAVPIVALTAHALSGDREACLLAGMNEYLSKPFKPDELQACLERL 142
>gi|445495732|ref|ZP_21462776.1| putative sensor/response regulatory hybrid protein
[Janthinobacterium sp. HH01]
gi|444791893|gb|ELX13440.1| putative sensor/response regulatory hybrid protein
[Janthinobacterium sp. HH01]
Length = 771
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 1/109 (0%)
Query: 32 VDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATK 91
V+D+P+ +++ S +L+ G +V+VA NG+E VD +G + V +DM+MPVMDG EAT+
Sbjct: 653 VEDNPLNQQVASALLQLEGAQVDVAGNGREGVDRVASGPPYDAVLMDMQMPVMDGNEATR 712
Query: 92 AMRAMKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
+RA S I+ +T+ E ER+ AG+D +KP+ +V ++
Sbjct: 713 LLRAQGHTSLPILALTANVLEAERDECRAAGVDDFISKPIEFEDMVAMV 761
>gi|433644996|ref|YP_007289998.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Mycobacterium smegmatis JS623]
gi|433294773|gb|AGB20593.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Mycobacterium smegmatis JS623]
Length = 239
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 73/130 (56%), Gaps = 1/130 (0%)
Query: 15 RISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI 74
R+ E+P ++ L+VDDDP +R + L+ GF V VA GKEA+ L + +
Sbjct: 2 RVGESPAQESASRTVLMVDDDPDVRTSVARGLRHSGFDVRVAATGKEALRLLSNESHDAL 61
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
V +D++MP +DG+ A+RA+ + I +++R++ +R ++AG D TKP + +
Sbjct: 62 V-LDVQMPELDGVAVVTALRALGNDIPICVLSARDTVNDRIAGLEAGADDYLTKPFDLGE 120
Query: 135 IVPLLEELQK 144
+V L L +
Sbjct: 121 LVARLHALLR 130
>gi|419836290|ref|ZP_14359732.1| his Kinase A domain protein [Vibrio cholerae HC-46B1]
gi|421342782|ref|ZP_15793187.1| his Kinase A domain protein [Vibrio cholerae HC-43B1]
gi|421354197|ref|ZP_15804529.1| his Kinase A domain protein [Vibrio cholerae HE-45]
gi|422307289|ref|ZP_16394451.1| his Kinase A domain protein [Vibrio cholerae CP1035(8)]
gi|423735198|ref|ZP_17708401.1| his Kinase A domain protein [Vibrio cholerae HC-41B1]
gi|424009127|ref|ZP_17752069.1| his Kinase A domain protein [Vibrio cholerae HC-44C1]
gi|395943299|gb|EJH53974.1| his Kinase A domain protein [Vibrio cholerae HC-43B1]
gi|395953322|gb|EJH63935.1| his Kinase A domain protein [Vibrio cholerae HE-45]
gi|408621976|gb|EKK94966.1| his Kinase A domain protein [Vibrio cholerae CP1035(8)]
gi|408630234|gb|EKL02862.1| his Kinase A domain protein [Vibrio cholerae HC-41B1]
gi|408857768|gb|EKL97450.1| his Kinase A domain protein [Vibrio cholerae HC-46B1]
gi|408864638|gb|EKM04068.1| his Kinase A domain protein [Vibrio cholerae HC-44C1]
Length = 574
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|269963784|ref|ZP_06178102.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831517|gb|EEZ85658.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 558
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 81/144 (56%), Gaps = 8/144 (5%)
Query: 7 GASSSKKARISENPVSKNRPYFA---LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
A+ ++ A E P P + L+V+D+ + +++ S++L G++ E+AENG+ AV
Sbjct: 414 AAAKTRPADKPEEPAMNTLPSRSERILLVEDNTVNQKVASLLLSKAGYQFEIAENGQIAV 473
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFM 118
D+F+ F I+ +D MPVMDG +ATK +RA + ++ I+ +T+ + + +
Sbjct: 474 DMFQQDNSFDIILMDCMMPVMDGFQATKEIRAYERVSGLPKTPIIALTASVVDDDIQRCY 533
Query: 119 QAGLDLCYTKPLTMAKIVPLLEEL 142
+G+D KP+ K++ +E +
Sbjct: 534 DSGMDAYVPKPVRKEKLLHQIESV 557
Score = 64.3 bits (155), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 76/132 (57%), Gaps = 10/132 (7%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
A+ + ++++A S +KN+ LVVDD+ + ++I + + GF ++A NG+EAVD
Sbjct: 257 AKFSQTAQRAGASATANTKNK---ILVVDDNTVNQKIAGLHVTKAGFTFDLAANGQEAVD 313
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRAM-KVESK-----IVGVTSRNSETEREVFM 118
+F+ ++ ++ +D MPVMDG EAT+ +R + K ES+ I+ +T+ + + +
Sbjct: 314 MFKKN-QYALILMDCMMPVMDGFEATEKIRQVEKEESRSYRIPIIALTASVVDDDIQKCF 372
Query: 119 QAGLDLCYTKPL 130
G+D KP
Sbjct: 373 DVGMDDYVPKPF 384
>gi|229515810|ref|ZP_04405269.1| signal transduction histidine kinase [Vibrio cholerae TMA 21]
gi|229347579|gb|EEO12539.1| signal transduction histidine kinase [Vibrio cholerae TMA 21]
Length = 572
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 74/129 (57%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KQSASSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLERNHA 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLE 140
I+ +++
Sbjct: 559 SKDIMEVVK 567
>gi|402224481|gb|EJU04543.1| hypothetical protein DACRYDRAFT_113942 [Dacryopinax sp. DJM-731
SS1]
Length = 973
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 67/122 (54%), Gaps = 7/122 (5%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-------RTGAKFHIVFID 78
P LVVDDD + R + + +L +G VE AE+G+EA+D+ R +F ++ +D
Sbjct: 832 PLRVLVVDDDTLTRTLMTRMLSRLGCVVETAEDGQEALDVLLGSPEANRPPQRFDMISLD 891
Query: 79 MEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
MPV+ G EA + +RA +VG T +T++ ++ AG D TKP+ + + +
Sbjct: 892 NSMPVLSGEEAVRRLRAAGRTDLVVGCTGNALKTDQTSYLSAGADRVLTKPIMLKDLKAM 951
Query: 139 LE 140
L+
Sbjct: 952 LQ 953
>gi|91223871|ref|ZP_01259135.1| putative histidine kinase [Vibrio alginolyticus 12G01]
gi|91191363|gb|EAS77628.1| putative histidine kinase [Vibrio alginolyticus 12G01]
Length = 1058
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/141 (28%), Positives = 83/141 (58%), Gaps = 8/141 (5%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E +SS++ + P+ R L+V+D+ + +++ S++L G++ EVAENG+ AV++
Sbjct: 919 ELPASSEQPEATVTPIRSER---ILLVEDNRVNQKVASLLLSKAGYQFEVAENGQIAVEM 975
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFMQA 120
F+ KF ++ +D MP+MDG EA++ +RA + ++ I+ +T+ + + + +
Sbjct: 976 FQKDGKFDVILMDCMMPIMDGFEASRQIRAYEASKGLAKTPIIALTASVVDDDIQRCFDS 1035
Query: 121 GLDLCYTKPLTMAKIVPLLEE 141
G+D KP+ K++ +E+
Sbjct: 1036 GMDAYVPKPVRKEKLLYQIEQ 1056
Score = 59.7 bits (143), Expect = 4e-07, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + ++I + + GF +VA NG+EAV+ F+ ++ ++ +D MPVMDG EA
Sbjct: 777 LVVDDNTVNQKIAGLHVTKAGFDFDVAVNGQEAVEQFQQN-QYSLILMDCMMPVMDGFEA 835
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +R ++V+ K I+ +T+ + + + G+D KP
Sbjct: 836 TQIIRQIEVKEKRAFRIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 882
>gi|381159487|ref|ZP_09868719.1| histidine kinase,Response regulator receiver domain
protein,histidine kinase [Thiorhodovibrio sp. 970]
gi|380877551|gb|EIC19643.1| histidine kinase,Response regulator receiver domain
protein,histidine kinase [Thiorhodovibrio sp. 970]
Length = 378
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 14/136 (10%)
Query: 8 ASSSKKARISENPV--------SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENG 59
+ ++ A NPV S+ + ALVVDD+P+ + IL+ +G E A NG
Sbjct: 221 GTCAEDASTDNNPVLADHQAGESQGKLLRALVVDDEPINANLLCRILEKLGHSPETACNG 280
Query: 60 KEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRA-----MKVESKIVGVTSRNSETER 114
++A+++ + +F +VF+D+ MP MDGI+AT+ +R + I+ +T+ E +R
Sbjct: 281 RQALEML-SAQRFDVVFMDVSMPEMDGIKATRLIRGNQNGDLDASIPIIAMTAHAMEGDR 339
Query: 115 EVFMQAGLDLCYTKPL 130
E + AG+D +KP+
Sbjct: 340 EKCLAAGMDWYLSKPI 355
>gi|366089979|ref|ZP_09456345.1| Alkaline phosphatase synthesis two-component response regulator
[Lactobacillus acidipiscis KCTC 13900]
Length = 240
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 67/107 (62%), Gaps = 1/107 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDDD I + LK GF+V+ A +G++A +L + F ++ +D+ +P +DGIE
Sbjct: 5 LVVDDDQAILTLLEYNLKKEGFEVQTATDGQQAFNL-ALSSTFDLILLDIMLPKLDGIEV 63
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
TK +R KV + I+ +T+R+ ET++ + ++ G D TKP + +++
Sbjct: 64 TKKLRQEKVATPIIMLTARDEETDKIIGLELGADDYITKPFSPREVI 110
>gi|242075124|ref|XP_002447498.1| hypothetical protein SORBIDRAFT_06g002010 [Sorghum bicolor]
gi|241938681|gb|EES11826.1| hypothetical protein SORBIDRAFT_06g002010 [Sorghum bicolor]
Length = 132
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVV+D + I +L + K ENGK+AVDLF G F IV +D +MP+M G E
Sbjct: 12 ALVVEDIKVDCVILMRMLHKLNCKATAVENGKKAVDLFVEGKSFDIVLLDKDMPIMSGPE 71
Query: 89 ATKAMRAM-KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
A +RAM E KIVGV++ +E FMQAG D+ KP+ + +LE
Sbjct: 72 AVAKIRAMGATEVKIVGVSADFG--AQEAFMQAGADVFVPKPVKFETLKAMLE 122
>gi|254420410|ref|ZP_05034134.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Brevundimonas sp. BAL3]
gi|196186587|gb|EDX81563.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Brevundimonas sp. BAL3]
Length = 566
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 74/132 (56%), Gaps = 6/132 (4%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
I + + RP L+ DD P+ ++ +MIL+ +G + A +G EAV F++G +F +V
Sbjct: 434 IEGDEIEIGRPLTVLIADDHPINLKVATMILEQIGSRCTTAVDGAEAVTGFKSG-RFDLV 492
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESKI----VGVTSRNSETER-EVFMQAGLDLCYTKPL 130
+DM+MPVMDG+ A + +RA++ S + + + S N+ E AG D +KP+
Sbjct: 493 LMDMQMPVMDGLTAVREIRALEDRSGLARTPIAILSANAMPEHIAAASDAGADEHLSKPI 552
Query: 131 TMAKIVPLLEEL 142
A ++ L+ L
Sbjct: 553 RPADLLRLVSRL 564
>gi|357116172|ref|XP_003559857.1| PREDICTED: two-component system protein A-like [Brachypodium
distachyon]
Length = 130
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 67/120 (55%), Gaps = 6/120 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR------TGAKFHIVFIDMEMPV 83
L+V+D+ + R + +L+ G V+ AENG EAV L R G + ++ D +MPV
Sbjct: 9 LLVEDEEIHRVVARAVLRGAGADVDEAENGAEAVRLVRERIGGGGGGAYDLILTDRQMPV 68
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
MDG EAT+ +RAM V + IV V+S ++ F AG D KPLT K+ +L + Q
Sbjct: 69 MDGHEATRRIRAMGVATPIVAVSSDCLPSDVHAFTAAGADDFTPKPLTKEKLGHILAKFQ 128
>gi|117926505|ref|YP_867122.1| Hpt sensor hybrid histidine kinase [Magnetococcus marinus MC-1]
gi|117610261|gb|ABK45716.1| amino acid-binding domain sensor hybrid histidine kinase
[Magnetococcus marinus MC-1]
Length = 1251
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/136 (33%), Positives = 79/136 (58%), Gaps = 11/136 (8%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
+G S+++ RI V L+V+D+ + +++ L+ G +V VAENG +++
Sbjct: 936 DGVSAARLRRIQGARV--------LLVEDNALNQQVAVAFLEQAGMEVAVAENGLRCIEM 987
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLD 123
+ + +VF+D++MPVMDG+EAT+ +R +K I+ +T++ +ERE M AGLD
Sbjct: 988 AEQ-SHYDLVFMDIQMPVMDGLEATRQLRQRSALAKLPIIAMTAQAMPSERECSMVAGLD 1046
Query: 124 LCYTKPLTMAKIVPLL 139
TKP++ I +L
Sbjct: 1047 DYLTKPVSPEAIQQML 1062
>gi|414588030|tpg|DAA38601.1| TPA: hypothetical protein ZEAMMB73_077889 [Zea mays]
Length = 187
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/128 (39%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
A I ++ + P ALVV+D + I +L + + ENGKEAVDLF G F
Sbjct: 52 ASIIQSNEGSSAPTRALVVEDIKVDCVILMHMLHKLQCEATAVENGKEAVDLFVEGKTFD 111
Query: 74 IVFIDMEMPVMDGIEATKAMRAM-KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
IV D +MPVM G EA +RAM E +IVGV++ RE FM+AG D+ KP+ +
Sbjct: 112 IVLSDKDMPVMSGPEAVAKIRAMGATEVRIVGVSADFG--GREAFMRAGADVFVPKPVKL 169
Query: 133 AKIVPLLE 140
+ +LE
Sbjct: 170 ETLRSMLE 177
>gi|407715887|ref|YP_006837167.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Cycloclasticus sp. P1]
gi|407256223|gb|AFT66664.1| response regulator receiver modulated diguanylate
cyclase/phosphodiesterase [Cycloclasticus sp. P1]
Length = 1475
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 6/142 (4%)
Query: 4 GAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
G+ A KK +I + V ++ ALVVDD+ + + LK +G +VA +G EA+
Sbjct: 628 GSTSAEIGKKPKIKTSDVLQSIK--ALVVDDNVTNQLVAEATLKEIGISSDVANDGLEAL 685
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQA 120
+ F+ + ++ +D MPVMDG EATKA+RA+ ++ + I+ +T+++ + E + +
Sbjct: 686 NAFKE-KNYDLILMDCNMPVMDGYEATKAIRALDLKYRQPIIIALTAKDQPGDFEHCINS 744
Query: 121 GLDLCYTKPLTMAKIVPLLEEL 142
G+D KP ++ ++ LE+L
Sbjct: 745 GMDDYLLKPFQLSALLAKLEKL 766
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/123 (30%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 6 EGASSSKKA--RISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
E + +SK A +S+ +K L+VDDD R + +L+ G++VE+ NG++AV
Sbjct: 890 EASLNSKLATLELSDTEQTKRTKEVVLIVDDDQSTRMTVASVLEREGYQVELGANGRDAV 949
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLD 123
LF + +++ +D MP+ DG EA + ++AM+ S + + + E+E+ V D
Sbjct: 950 RLFEV-LRPNVIIMDAMMPIKDGFEACREIKAMQGGSDVPVLITTALESEKSV------D 1002
Query: 124 LCY 126
L Y
Sbjct: 1003 LAY 1005
>gi|337749678|ref|YP_004643840.1| PAS/PAC sensor hybrid histidine kinase [Paenibacillus mucilaginosus
KNP414]
gi|336300867|gb|AEI43970.1| PAS/PAC sensor hybrid histidine kinase [Paenibacillus mucilaginosus
KNP414]
Length = 639
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 72/116 (62%), Gaps = 4/116 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ + + +++ +G+ V NG EAVD A + ++F+D++MP+M+G+EA
Sbjct: 518 LIAEDNDINTLVLKRVIEKLGYSATVVSNGAEAVDAAIRHA-YDLIFMDVQMPLMNGLEA 576
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TKA++AM E IV VT+ + +RE ++ AG+D +KP++M + ++E+
Sbjct: 577 TKAIKAMSAEGSCPYIVAVTAHAIKGDREKYLAAGMDEYISKPISMDAVSGIIEQF 632
>gi|312881767|ref|ZP_07741541.1| CheY-like receiver protein [Vibrio caribbenthicus ATCC BAA-2122]
gi|309370518|gb|EFP97996.1| CheY-like receiver protein [Vibrio caribbenthicus ATCC BAA-2122]
Length = 234
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/118 (30%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ M ++I +++L+ G+ + NG EA++L ++G KF ++ +D MP+MDG+ +
Sbjct: 113 LVVDDNQMNQKIAALLLEKAGYNFTLVSNGLEALNLVKSGQKFGVILMDCHMPIMDGLTS 172
Query: 90 TKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T +R +++ + I+ +T E G+D +KP +++ LL EL
Sbjct: 173 TGLIRQWELQNGLDKTPIIALTGSVEPEEIRSCYDIGMDAYLSKPYRSEQLINLLSEL 230
>gi|300936769|ref|ZP_07151662.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 21-1]
gi|300458099|gb|EFK21592.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 21-1]
Length = 933
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I EG + ++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 784 LIEMEGDDPANALPSTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 843
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 844 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 902
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 903 MDSCLSKPVTL 913
>gi|260777312|ref|ZP_05886206.1| hypothetical protein VIC_002706 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260606978|gb|EEX33252.1| hypothetical protein VIC_002706 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 882
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 75/140 (53%), Gaps = 7/140 (5%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
S S R P++++R L+V+D+ M ++I S L VG ++A NG EAV++F++
Sbjct: 742 SYSDNERPQPYPINESR--CVLIVEDNLMNQKIASFFLSKVGMNYQIASNGAEAVNMFQS 799
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLD 123
G + + +D MPVMDG+ AT+++R + E + I+ +T+ E + +AG+D
Sbjct: 800 GRLYTAILMDCMMPVMDGLTATRSIRKWETEQGRDRTPIIALTASVLPEEIDSCFEAGMD 859
Query: 124 LCYTKPLTMAKIVPLLEELQ 143
KP ++ E L
Sbjct: 860 AYLPKPYKSQQLFDTFERLH 879
>gi|229521544|ref|ZP_04410963.1| signal transduction histidine kinase [Vibrio cholerae TM 11079-80]
gi|229341642|gb|EEO06645.1| signal transduction histidine kinase [Vibrio cholerae TM 11079-80]
Length = 576
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|119487282|ref|ZP_01621033.1| hybrid sensory kinase [Lyngbya sp. PCC 8106]
gi|119455837|gb|EAW36972.1| hybrid sensory kinase [Lyngbya sp. PCC 8106]
Length = 1259
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 82/142 (57%), Gaps = 13/142 (9%)
Query: 9 SSSKKARISENPVSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
+SS+ I P N+P Y L+VDD+P R++ IL VGF+++ A NG EA+D ++
Sbjct: 1027 NSSQSQVIGLQP---NQPLYRILIVDDEPYNRQLLEQILTPVGFELQTANNGLEAIDQWQ 1083
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK--------IVGVTSRNSETEREVFMQ 119
+ ++++D++MPV+DG EA + +R ++ +++ I+ +T+ ++E +Q
Sbjct: 1084 N-FQPDLIWMDLKMPVLDGYEAIRQIRQLEQQNQASASPRTVIIALTASAYNYQKEAALQ 1142
Query: 120 AGLDLCYTKPLTMAKIVPLLEE 141
AG D KPL + I+ + E
Sbjct: 1143 AGCDDFVYKPLQVTVILNKMTE 1164
>gi|411010658|ref|ZP_11386987.1| hybrid sensory histidine kinase BarA [Aeromonas aquariorum AAK1]
Length = 903
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 81/143 (56%), Gaps = 6/143 (4%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
++ E A S+ S V + + L VDD+ ++ + +LK + +V V +NGKE
Sbjct: 643 LLSPEAARSTPLPEPSPRSVQEIK---VLAVDDNAANLKLIAAMLKEMVSQVVVCKNGKE 699
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQ 119
AV L ++ F I+F+D++MP+MDGI AT+A+R ++ E+ IV VT+ ERE ++
Sbjct: 700 AVRLAQS-QPFDIIFMDIQMPIMDGISATQAIRSQSLNTETPIVAVTAHAIPGERERLIR 758
Query: 120 AGLDLCYTKPLTMAKIVPLLEEL 142
G+D KP+ A + L+ +
Sbjct: 759 QGMDDYLAKPIDEAMLAKLITDF 781
>gi|423199766|ref|ZP_17186348.1| hypothetical protein HMPREF1171_04380 [Aeromonas hydrophila SSU]
gi|404628844|gb|EKB25615.1| hypothetical protein HMPREF1171_04380 [Aeromonas hydrophila SSU]
Length = 903
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L VDD+ ++ + +LK + +V V +NGKEAV L ++ F I+F+D++MP+MDGI A
Sbjct: 668 LAVDDNAANLKLIAAMLKEMVSQVVVCKNGKEAVRLAQS-QPFDIIFMDIQMPIMDGISA 726
Query: 90 TKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+A+R ++ E+ IV VT+ ERE ++ G+D KP+ A + L+ +
Sbjct: 727 TQAIRSQSLNTETPIVAVTAHAIPGERERLIRQGMDDYLAKPIDEAMLAKLITDF 781
>gi|386393709|ref|ZP_10078490.1| PAS domain S-box [Desulfovibrio sp. U5L]
gi|385734587|gb|EIG54785.1| PAS domain S-box [Desulfovibrio sp. U5L]
Length = 1944
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 7/132 (5%)
Query: 7 GASSSKKARISENPVSKNRPYF-ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
G ++ A + P S+ R L V+DD + + +L+ +G V A +G+EAVD
Sbjct: 1788 GGPPARTAEAGDRPRSQARERLRILFVEDDAVNQMTGKRMLEKLGHAVVAAGDGREAVDC 1847
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAM-----KVESKIVGVTSRNSETEREVFMQA 120
F A F ++F+D++MP MDG+EAT+A+R + + I+ +T+ ++RE F+ A
Sbjct: 1848 FLRQA-FDLIFMDIQMPRMDGVEATRAIRGAGAPGRRTDLPIIALTAYAMTSDREKFLAA 1906
Query: 121 GLDLCYTKPLTM 132
GLD KP+ +
Sbjct: 1907 GLDDYVAKPIEL 1918
>gi|365891333|ref|ZP_09429766.1| putative Histidine kinase [Bradyrhizobium sp. STM 3809]
gi|365332747|emb|CCE02297.1| putative Histidine kinase [Bradyrhizobium sp. STM 3809]
Length = 760
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/104 (38%), Positives = 66/104 (63%), Gaps = 4/104 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+IR + + +L G + +VA NG+EA+D + G ++ IV +DM+MP MDG+ A
Sbjct: 637 LVVDDTPIIRTLITKLLARFGCQFDVACNGREAIDAVQ-GKRYDIVLMDMQMPEMDGMTA 695
Query: 90 TKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T A+R + + I+ +T+ +RE+ + AG++ TKP+
Sbjct: 696 TAAIRGLDGPASDVPIIALTANALVGQREICIGAGMNDFLTKPI 739
>gi|427420600|ref|ZP_18910783.1| putative transmembrane sensor domain protein [Leptolyngbya sp. PCC
7375]
gi|425756477|gb|EKU97331.1| putative transmembrane sensor domain protein [Leptolyngbya sp. PCC
7375]
Length = 804
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 71/121 (58%), Gaps = 6/121 (4%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L+ DD+P+ R++ + +L S+GF++ A NG+EAV L+ + H +++DM+MPVM+
Sbjct: 678 PLRILIADDEPISRKLLNKLLTSLGFQIREATNGQEAVALWESWHP-HFIWMDMQMPVMN 736
Query: 86 GIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
G EAT+ +R E+ IV +T+ +RE + AG D +KP +++ L
Sbjct: 737 GCEATRQIRQKSQEANISSPTIVALTASALAQDREQSLGAGCDDFVSKPFRRDELLDKLS 796
Query: 141 E 141
+
Sbjct: 797 Q 797
>gi|380487920|emb|CCF37726.1| hsp90-like protein [Colletotrichum higginsianum]
Length = 1093
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/139 (32%), Positives = 84/139 (60%), Gaps = 11/139 (7%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
A SK++ S+ K+RP F L+VDD+ + +I + +K +G A +G++A+++F+
Sbjct: 955 AGGSKRSGRSK----KDRPRF-LLVDDNALNLKILASYMKKLGHDFHNAMDGEQALEIFQ 1009
Query: 68 T-GAKFHIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAG 121
+FH V +D+ MPVMDG EAT+ +RA++ ++ +I +T S + ++ +G
Sbjct: 1010 ERPGQFHCVLMDISMPVMDGFEATRRIRAIETKNSLPRCQIFALTGLASASAQQEAFASG 1069
Query: 122 LDLCYTKPLTMAKIVPLLE 140
+DL TKP+ + ++ +LE
Sbjct: 1070 IDLFLTKPVRLKELTRILE 1088
>gi|148975382|ref|ZP_01812306.1| hypothetical two-component sensor [Vibrionales bacterium SWAT-3]
gi|145965306|gb|EDK30556.1| hypothetical two-component sensor [Vibrionales bacterium SWAT-3]
Length = 796
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 69/110 (62%), Gaps = 5/110 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D + +++ M+LK +GF+V++A+NGK VD F+ ++ ++F+D +MPV+DG EA
Sbjct: 665 LVVEDSRVNQQVAKMMLKKLGFEVDIADNGKVGVDKFKHN-EYQMIFMDCQMPVLDGFEA 723
Query: 90 TKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
TK +RA + + IV +T+ + ++ + G+D KP+ K+
Sbjct: 724 TKQIRAHEEGTSKHIPIVALTANVVQRDKHLCFDVGMDEFLPKPVNQGKL 773
>gi|440231685|ref|YP_007345478.1| signal transduction histidine kinase [Serratia marcescens FGI94]
gi|440053390|gb|AGB83293.1| signal transduction histidine kinase [Serratia marcescens FGI94]
Length = 943
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ S L S+G++V A +G +A+ + IV D+ MP MDG
Sbjct: 815 LVVDDHPINRRLLSDQLTSLGYRVVTANDGVDALGVLNHEC-VDIVLTDVNMPNMDGYRL 873
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+ +R + S ++GVT+ E++ ++AG+D C +KP+T+ + L
Sbjct: 874 TQRLRELNFTSPVIGVTANALAEEKQRCIEAGMDNCLSKPVTLETLAETL 923
>gi|213617471|ref|ZP_03372297.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhi str. E98-2068]
Length = 162
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 29 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 87
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 88 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 143
>gi|22023765|gb|AAM89215.1|AF462151_1 hybrid histidine kinase [Tritrichomonas foetus]
Length = 1547
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/129 (31%), Positives = 75/129 (58%), Gaps = 4/129 (3%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
S+ V ++ LVV+D+ + + IL+++G + +AENGKEA+D +F ++F
Sbjct: 1416 SQEKVCDDKTQKILVVEDNKTNQFVMKKILQNIGCPMRIAENGKEAIDALEQ-EEFDLIF 1474
Query: 77 IDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+D +MPV+DGIEATK +R+ I+ +T+ E + E +AG+D +KP+ +
Sbjct: 1475 MDCQMPVLDGIEATKIIRSCDKNYSSIPIIALTASAVEGDEETCRKAGMDAYLSKPVRIQ 1534
Query: 134 KIVPLLEEL 142
+I ++ +
Sbjct: 1535 QIKNIIAQF 1543
>gi|330508892|ref|YP_004385320.1| histidine-protein kinase [Methanosaeta concilii GP6]
gi|328929700|gb|AEB69502.1| histidine-protein kinase [Methanosaeta concilii GP6]
Length = 925
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/123 (29%), Positives = 75/123 (60%), Gaps = 1/123 (0%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E P+++ R L+ +D+P+ R++ +LK +G++ +VAENG + + + + IV +
Sbjct: 794 EGPIAEARTIRILMAEDNPVNRKVALSMLKRLGYQADVAENGLKVLQALQE-KPYDIVLM 852
Query: 78 DMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVP 137
D++MP MDG+EAT+ +R + I+ +T+ + R+ + AG++ +KP+ + ++
Sbjct: 853 DVQMPEMDGLEATRRIRDSGYNTCIIAMTAHSMGESRDECLDAGMNAYISKPIEIEELAR 912
Query: 138 LLE 140
+LE
Sbjct: 913 VLE 915
>gi|229529485|ref|ZP_04418875.1| signal transduction histidine kinase [Vibrio cholerae 12129(1)]
gi|229333259|gb|EEN98745.1| signal transduction histidine kinase [Vibrio cholerae 12129(1)]
Length = 572
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KQSTSSSQKIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|83855337|ref|ZP_00948867.1| sensor histidine kinase/response regulator [Sulfitobacter sp.
NAS-14.1]
gi|83843180|gb|EAP82347.1| sensor histidine kinase/response regulator [Sulfitobacter sp.
NAS-14.1]
Length = 713
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 79/150 (52%), Gaps = 20/150 (13%)
Query: 15 RISENPVS----------------KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAEN 58
RI +NP+S RP L +D+ R + +L+ + +++A N
Sbjct: 554 RIMKNPISVTELLAEVSTMQPVPVGTRPMRVLAAEDNKTNRLVLRKMLQRLNIDLQLATN 613
Query: 59 GKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETERE 115
G+EAV LF T + +VF+D+ MP M+G +A A+RA++ E+ IV +T+ + E+E
Sbjct: 614 GQEAVALFET-FRPDLVFMDISMPKMNGKDAAAAIRALEGEASSCPIVALTAHAIQDEKE 672
Query: 116 VFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
+ AGLD TKPL A++V LL N
Sbjct: 673 RILAAGLDHFLTKPLRKAELVALLNRYCPN 702
>gi|304310368|ref|YP_003809966.1| response regulator receiver [gamma proteobacterium HdN1]
gi|301796101|emb|CBL44306.1| putative response regulator receiver [gamma proteobacterium HdN1]
Length = 1044
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/141 (31%), Positives = 77/141 (54%), Gaps = 8/141 (5%)
Query: 1 MMIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGK 60
M+ G + + S+ P + LVVDD+ + R++ L+ +G++ + AENG+
Sbjct: 898 MLAGRRETEKTAQLIASQTPSKR-----LLVVDDNEVNRKVACGFLRKLGYEADTAENGQ 952
Query: 61 EAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES--KIVGVTSRNSETEREVFM 118
EA+D + ++ +D +MPVMDG EAT+ ++A+ I+ VT+ E +R+ +
Sbjct: 953 EALDAVLE-KDYGLILMDCQMPVMDGYEATRQIKALPKGKYLPIIAVTANAMEGDRDKCL 1011
Query: 119 QAGLDLCYTKPLTMAKIVPLL 139
AG+D TKP+ K+ LL
Sbjct: 1012 AAGMDDYTTKPIRREKLQELL 1032
>gi|424045676|ref|ZP_17783241.1| response regulator [Vibrio cholerae HENC-03]
gi|408886005|gb|EKM24698.1| response regulator [Vibrio cholerae HENC-03]
Length = 998
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/142 (29%), Positives = 80/142 (56%), Gaps = 8/142 (5%)
Query: 7 GASSSKKARISENPVSKNRPYFA---LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
A+ ++ A E P P + L+V+D+ + +++ S++L G++ E+AENG+ AV
Sbjct: 854 AAAKTRPADKPEEPAMNTLPSRSERILLVEDNTVNQKVASLLLSKAGYQFEIAENGQIAV 913
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFM 118
D+F+ F I+ +D MPVMDG +ATK +RA + ++ I+ +T+ + + +
Sbjct: 914 DMFQQDNSFDIILMDCMMPVMDGFQATKEIRAYERVSGLPKTPIIALTASVVDDDIQRCY 973
Query: 119 QAGLDLCYTKPLTMAKIVPLLE 140
+G+D KP+ K++ +E
Sbjct: 974 DSGMDAYVPKPVRKEKLLHQIE 995
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 61/107 (57%), Gaps = 7/107 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + ++I + + GF ++A NG+EAVD+F+ ++ ++ +D MPVMDG EA
Sbjct: 719 LVVDDNTVNQKIAGLHVTKAGFTFDLAANGQEAVDMFKKN-QYALILMDCMMPVMDGFEA 777
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +R ++ E I+ +T+ + + + G+D KP
Sbjct: 778 TEKIRQVEKEENRSYRIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 824
>gi|424590938|ref|ZP_18030371.1| his Kinase A domain protein [Vibrio cholerae CP1037(10)]
gi|408033620|gb|EKG70154.1| his Kinase A domain protein [Vibrio cholerae CP1037(10)]
Length = 570
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|313681751|ref|YP_004059489.1| histidine kinase [Sulfuricurvum kujiense DSM 16994]
gi|313154611|gb|ADR33289.1| histidine kinase [Sulfuricurvum kujiense DSM 16994]
Length = 648
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 72/118 (61%), Gaps = 6/118 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVV+D+ + +R+ ++LK G V NG EAV++ R F IVF+D++MP+ DGI
Sbjct: 526 ALVVEDNLINQRLIQLLLKEYGISVVTVSNGDEAVEICRE-KTFDIVFMDIDMPIKDGIL 584
Query: 89 ATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
AT+ ++A + K I+ +T+ E +RE ++ GLD +KPLT K+ +L++
Sbjct: 585 ATEEIKAQERPFKIGHMPIIALTALAMEGDREYILERGLDDYLSKPLTREKLEYVLQK 642
>gi|260772841|ref|ZP_05881757.1| signal transduction histidine kinase [Vibrio metschnikovii CIP
69.14]
gi|260611980|gb|EEX37183.1| signal transduction histidine kinase [Vibrio metschnikovii CIP
69.14]
Length = 578
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/112 (30%), Positives = 67/112 (59%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D + + +IL +G+ V + +G++A+ L T F ++ +D+ MPVMDGIEA
Sbjct: 461 LVVEDTKTNQMVIQLILSRMGYNVTMVSDGQQAISLTETSHVFDLILMDISMPVMDGIEA 520
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
TK +R+ ++ I+ +T+ + + F QAG++ KP+ ++ ++++
Sbjct: 521 TKILRSKNIQIPIIALTAHAMQDDHATFRQAGMNDVVLKPIRSQELQRIIKQ 572
>gi|67923070|ref|ZP_00516562.1| Response regulator receiver [Crocosphaera watsonii WH 8501]
gi|67855083|gb|EAM50350.1| Response regulator receiver [Crocosphaera watsonii WH 8501]
Length = 282
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 71/120 (59%), Gaps = 4/120 (3%)
Query: 24 NRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
N+P Y LVVDD R + +L +GF++ A NGKEA+ +++ H++++DM+MP
Sbjct: 73 NQPQYRILVVDDRYSNRELVVKLLTPLGFEIRTASNGKEAIQVWQQWEP-HLIWMDMKMP 131
Query: 83 VMDGIEATKAMR-AMKVE-SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
+MDG EATK ++ MK + + I+ +T+ E E+ V + G D KP A+I +E
Sbjct: 132 IMDGYEATKVIKTTMKGQATAIIALTASVFEEEKAVVLSTGCDSFIRKPFREAEIFDAME 191
>gi|392424042|ref|YP_006465036.1| CheY-like receiver domain-containing protein [Desulfosporosinus
acidiphilus SJ4]
gi|391354005|gb|AFM39704.1| CheY-like receiver domain-containing protein [Desulfosporosinus
acidiphilus SJ4]
Length = 145
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
+P L+V+DD + R + I G++V +AENG+ AVD+++ +F ++ +D +MP++
Sbjct: 19 KPLKLLIVEDDEINRMVMEKIAIRKGWEVLLAENGEVAVDIYQK-LEFEVIIMDCQMPIL 77
Query: 85 DGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
DG +AT+A+R ++ S I+ +T+ E +RE + AG+D TKP+ ++E
Sbjct: 78 DGFKATRAIRQLESNSGTHIPIIALTANTLEGDREKCLNAGMDDYLTKPIETNDFYTIVE 137
Query: 141 EL 142
+
Sbjct: 138 KW 139
>gi|428221306|ref|YP_007105476.1| PAS domain-containing protein [Synechococcus sp. PCC 7502]
gi|427994646|gb|AFY73341.1| PAS domain S-box [Synechococcus sp. PCC 7502]
Length = 1007
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/154 (29%), Positives = 87/154 (56%), Gaps = 14/154 (9%)
Query: 3 IGAEGASSSKKARISE----------NPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFK 52
+GA SS K A +S+ P++ + P L+V+D+ + +++ ILK +G+
Sbjct: 854 LGAASLSSLKSAPMSQLLSTQVNFIDPPLAASLPLNILLVEDNVVNQKVAIRILKRMGYS 913
Query: 53 VEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAM---KVESKIVGVTSRN 109
++AENG EA+ + + + +VF+D++MP MDG+ ATK +R + I+ +T+
Sbjct: 914 ADLAENGLEAIATLQK-SSYDVVFMDIQMPEMDGLAATKEIRKLWKSATSPYIIAMTANA 972
Query: 110 SETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
+RE+ + AG++ +KP+++ KI L ++
Sbjct: 973 MIGDREICLDAGMNDYVSKPISIEKIGNALAQIH 1006
>gi|410462834|ref|ZP_11316390.1| PAS domain S-box [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409984098|gb|EKO40431.1| PAS domain S-box [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 1379
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/141 (29%), Positives = 78/141 (55%), Gaps = 6/141 (4%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
G + + A ++E + +P+ L+ DD R++ S+ L++ +E ENG++A+D F
Sbjct: 1234 GEQTPETASVAELSDAGGQPWRVLLADDSVGNRQVVSLFLENQPVILEEVENGQDALDRF 1293
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAG 121
+ G IV +D MP+MDG+ A +AMR + E + I+G+T+R + ++AG
Sbjct: 1294 KKGG-IDIVLMDHVMPIMDGLAAVRAMRQHEWEAGLKPTPIIGITARAFPEDESACLEAG 1352
Query: 122 LDLCYTKPLTMAKIVPLLEEL 142
+KP+ + ++ ++EL
Sbjct: 1353 CSAYLSKPVRRSALLAAMQEL 1373
>gi|309790923|ref|ZP_07685465.1| two-component hybrid sensor and regulator [Oscillochloris trichoides
DG-6]
gi|308227037|gb|EFO80723.1| two-component hybrid sensor and regulator [Oscillochloris trichoides
DG6]
Length = 1010
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 79/129 (61%), Gaps = 3/129 (2%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+S+ V+++ L+V+D+ + S L S G+ V VA NG+EA+D A+ ++
Sbjct: 881 VSQPVVARSPGRRILLVEDNTVNILTISDYLHSRGYTVAVANNGQEALDSIEQ-AQPELI 939
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+D++MPVMDGIEAT+ +RAM S+ I+ +T+ +RE + AG + TKP+++
Sbjct: 940 LMDIQMPVMDGIEATRRLRAMPAYSEIPIIALTALAMPGDRERCLAAGANAYLTKPISLR 999
Query: 134 KIVPLLEEL 142
+V ++EE+
Sbjct: 1000 HLVQMIEEM 1008
>gi|334116803|ref|ZP_08490895.1| PAS sensor protein [Microcoleus vaginatus FGP-2]
gi|333461623|gb|EGK90228.1| PAS sensor protein [Microcoleus vaginatus FGP-2]
Length = 2286
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/122 (36%), Positives = 75/122 (61%), Gaps = 4/122 (3%)
Query: 21 VSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
++ N+P Y LVVDD R++ +LK VGF+VE A NG EA++++ + + H++++DM
Sbjct: 2070 LAPNQPQYRILVVDDRDYNRQLLVKLLKPVGFEVEEASNGIEALEIWDSYSP-HLIWMDM 2128
Query: 80 EMPVMDGIEATKAMRA-MKVE-SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVP 137
MPVMDG EATK ++ +K + + ++ +T+ E E+ V + AG D KP I
Sbjct: 2129 RMPVMDGYEATKRIKGTLKGQATAVIAITASVWEEEKAVILSAGCDDFVRKPFHTEAIFD 2188
Query: 138 LL 139
++
Sbjct: 2189 IM 2190
>gi|342890699|gb|EGU89461.1| hypothetical protein FOXB_00028 [Fusarium oxysporum Fo5176]
Length = 1111
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 73/116 (62%), Gaps = 7/116 (6%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR-TGAKFHIVFIDMEMPVM 84
P F L+V+D+P+ ++ + ++ + A NG+EAV+ ++ T +F V +D+ MPVM
Sbjct: 991 PQF-LLVEDNPINLKMLTHSMRKLQKPYRTAVNGQEAVNAYKETPGQFKYVLMDISMPVM 1049
Query: 85 DGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
DG+EAT+ +RA ++ SKI+ VT SE+ RE ++G+D+ TKP+ + ++
Sbjct: 1050 DGLEATRQIRAFELYNGIAASKIIAVTGLGSESTREEATRSGVDIFITKPVKLREL 1105
>gi|384424550|ref|YP_005633908.1| Signal transduction histidine kinase [Vibrio cholerae LMA3984-4]
gi|327484103|gb|AEA78510.1| Signal transduction histidine kinase [Vibrio cholerae LMA3984-4]
Length = 570
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KQSASSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|365873174|ref|ZP_09412707.1| PAS domain S-box [Thermanaerovibrio velox DSM 12556]
gi|363983261|gb|EHM09468.1| PAS domain S-box [Thermanaerovibrio velox DSM 12556]
Length = 888
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 70/110 (63%), Gaps = 4/110 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ +R+ + +L+ +G V A +GKEA+ +F F +V +D++MPVMDG+E
Sbjct: 646 LLAEDNWANQRLMTTVLRRMGLDVLCASDGKEALGIFEQEGPFDMVLMDVQMPVMDGLEV 705
Query: 90 TKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
T+ +R M+ S IVG+T+ +S +R+ ++AG+D KP++ +++
Sbjct: 706 TRRIRGMEKGSGRRTLIVGLTAFSSPEDRKACVEAGMDRFLAKPVSPSRL 755
>gi|87309014|ref|ZP_01091152.1| sensory transduction histidine kinase [Blastopirellula marina DSM
3645]
gi|87288357|gb|EAQ80253.1| sensory transduction histidine kinase [Blastopirellula marina DSM
3645]
Length = 618
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 64/105 (60%), Gaps = 4/105 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK----FHIVFIDMEMPVMD 85
L+V+D P +R+ +IL+ G +V +A +G++ VD+ T F ++ +DM+MP+MD
Sbjct: 484 LLVEDGPDNQRLLRLILEKAGAEVAIANDGRDGVDMTLTARNQEVPFDLILMDMQMPIMD 543
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
G +AT+ +R + + I+ +T+ +R+ M AG+D TKP+
Sbjct: 544 GYQATRTLRREAIRTPIIALTAHAMSDDRQRCMDAGVDDYLTKPI 588
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 39/77 (50%), Gaps = 5/77 (6%)
Query: 50 GFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPV-MDGIEATKAMRAMKVESKIVG 104
GF++E A G+E ++ R+G F + F+DM MP DG+E K + + ++V
Sbjct: 62 GFEIESAFQGEEGLEKVAAAERSGFPFALAFVDMRMPPGWDGLETVKQIWRAHPDLQVVI 121
Query: 105 VTSRNSETEREVFMQAG 121
T+ + + + + G
Sbjct: 122 CTAYSDHSWESLLQELG 138
>gi|427799241|ref|ZP_18967234.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
gi|414064599|gb|EKT45507.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Typhimurium str. STm5]
Length = 180
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 47 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 105
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 106 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 161
>gi|255535913|ref|YP_003096284.1| PAS/PAC domain protein [Flavobacteriaceae bacterium 3519-10]
gi|255342109|gb|ACU08222.1| PAS/PAC domain protein [Flavobacteriaceae bacterium 3519-10]
Length = 1298
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 75/119 (63%), Gaps = 7/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAE--NGKEAVDLFRTGAKFHIVFIDMEMPVMDGI 87
L+VDD+P+ +++ +++S+ AE +GK+A+DL R F ++ +D++MPVMDGI
Sbjct: 1061 LLVDDNPVNMVLNNRMMQSLVQDAVFAEVTDGKQALDLCRNQV-FDLILMDVQMPVMDGI 1119
Query: 88 EATKAMRAM-KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
EATK +R + + I+GVT+ N E+E + AG+D TKPL A+ LL LQ N
Sbjct: 1120 EATKQIRELPHAKPVIIGVTAGNVVGEKEKCLDAGMDDFLTKPLRQAE---LLIALQNN 1175
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 53/117 (45%), Gaps = 5/117 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD+ R I +L +A NG EA+ + G +F I+ +D MPV+ G+E
Sbjct: 918 LIVDDNENNRIILQHMLAYKNIDSRLAANGMEALQILMAGERFDIILMDYHMPVISGLET 977
Query: 90 TKAMRAMKVESKIVG--VTSRNSETEREV---FMQAGLDLCYTKPLTMAKIVPLLEE 141
+R + E V V S E EV F Q+ C KP+ + L++
Sbjct: 978 VTKIRELYTEHDEVSPLVVLHTSSEEHEVINSFRQSENSYCLLKPIKSRDLYATLKQ 1034
>gi|406879817|gb|EKD28312.1| hypothetical protein ACD_79C00343G0002 [uncultured bacterium]
Length = 652
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 73/125 (58%), Gaps = 6/125 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP L+ +D+ + R+I IL G+KVE A NG+E ++ + KF ++ +D++MPVM
Sbjct: 527 RPLKVLLAEDNLINRKIAVAILNKYGYKVETAVNGQEVIEFLKR-EKFDVILMDVQMPVM 585
Query: 85 DGIEATKAMRA-----MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
DG+EAT +R + + I+ +T+ E ++ F++AG++ +KP ++V +
Sbjct: 586 DGLEATLIIRNSNEKLLDSQIPIIALTAHAFEEDKAKFIKAGMNSFISKPFNKEQLVHEI 645
Query: 140 EELQK 144
E + K
Sbjct: 646 ERVVK 650
>gi|238753717|ref|ZP_04615078.1| Sensor kinase protein rcsC [Yersinia ruckeri ATCC 29473]
gi|238707953|gb|EEQ00310.1| Sensor kinase protein rcsC [Yersinia ruckeri ATCC 29473]
Length = 925
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 68/123 (55%), Gaps = 1/123 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
S+N N LVVDD P+ RR+ + L S+G++V A +G +A+ + G+ IV
Sbjct: 793 SKNSQIDNSDMSILVVDDHPINRRLLADQLTSLGYQVLTANDGLDALTVL-AGSHIDIVL 851
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
D+ MP MDG T+ +R ++GVT+ E++ + AG+D C +KP+T+ +
Sbjct: 852 TDVNMPNMDGYRLTQCLREQNHTFPVIGVTANALAEEKQRCLDAGMDNCLSKPVTLDTLR 911
Query: 137 PLL 139
+L
Sbjct: 912 QML 914
>gi|153829718|ref|ZP_01982385.1| sensor histidine kinase/response regulator [Vibrio cholerae 623-39]
gi|148874797|gb|EDL72932.1| sensor histidine kinase/response regulator [Vibrio cholerae 623-39]
Length = 572
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLDRNRA 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|37526937|ref|NP_930281.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Photorhabdus luminescens subsp. laumondii
TTO1]
gi|36786370|emb|CAE15423.1| sensor protein (capsular synthesis regulator component C)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 938
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 67/113 (59%), Gaps = 1/113 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ + LKS+GF+ +A +G +A++ ++G I+ D+ MP MDG
Sbjct: 826 LVVDDHPINRRLLADQLKSIGFQTAMANDGLDALEYLKSGG-IDIILTDVNMPNMDGYAL 884
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T +R + I+G+T+ E++ + AG+D C +KP+++ + L ++
Sbjct: 885 TMYLRNDGCKLPIIGITANALAEEKQRCIDAGMDDCLSKPVSLVTLRQTLTQM 937
>gi|218677263|ref|YP_002396082.1| two-component sensor [Vibrio splendidus LGP32]
gi|218325531|emb|CAV27738.1| putative two-component sensor [Vibrio splendidus LGP32]
Length = 808
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 77/130 (59%), Gaps = 7/130 (5%)
Query: 12 KKARISENPVSKNRPYFA--LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
K+A I E P P+ LVV+D + +++ M+LK +GF+V++A+NG+ V+ F+
Sbjct: 657 KQAPIKEEPKPVAAPFSGKVLVVEDSRVNQQVAKMMLKKLGFEVDIADNGEIGVEKFKAN 716
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLC 125
+ ++F+D +MPV+DG EATK +RA++ + IV +T+ + ++ + G+D
Sbjct: 717 -DYVMIFMDCQMPVLDGFEATKQIRALEEGTSKHIPIVALTANVVQRDKHLCFDVGMDEF 775
Query: 126 YTKPLTMAKI 135
KP+ K+
Sbjct: 776 LPKPVNQGKL 785
>gi|213025912|ref|ZP_03340359.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhi str. 404ty]
Length = 252
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 119 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 177
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 178 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 233
>gi|209523104|ref|ZP_03271660.1| histidine kinase [Arthrospira maxima CS-328]
gi|376006114|ref|ZP_09783450.1| putative Signal transduction histidine kinase (fragment)
[Arthrospira sp. PCC 8005]
gi|423066418|ref|ZP_17055208.1| histidine kinase [Arthrospira platensis C1]
gi|209496255|gb|EDZ96554.1| histidine kinase [Arthrospira maxima CS-328]
gi|375325510|emb|CCE19203.1| putative Signal transduction histidine kinase (fragment)
[Arthrospira sp. PCC 8005]
gi|406712090|gb|EKD07281.1| histidine kinase [Arthrospira platensis C1]
Length = 410
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 70/113 (61%), Gaps = 4/113 (3%)
Query: 21 VSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
++ N+P Y LVVDD +++ L VGF+V AENG+EA+ ++ H++++DM
Sbjct: 195 LAPNQPKYRILVVDDRESNQQLLVKFLIPVGFEVLEAENGQEAIAIWNQWEP-HLIWMDM 253
Query: 80 EMPVMDGIEATKAMRA-MKVESK-IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
MPVMDG EATK +++ +K ++ I+ +T+ E EREV + AG D KP
Sbjct: 254 RMPVMDGYEATKRIKSHLKGQATVIIALTASAFEEEREVVLSAGCDDFVRKPF 306
>gi|153827167|ref|ZP_01979834.1| sensor histidine kinase/response regulator [Vibrio cholerae MZO-2]
gi|149738929|gb|EDM53251.1| sensor histidine kinase/response regulator [Vibrio cholerae MZO-2]
Length = 572
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLDRNHA 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|297579033|ref|ZP_06940961.1| sensor histidine kinase/response regulator [Vibrio cholerae RC385]
gi|297536627|gb|EFH75460.1| sensor histidine kinase/response regulator [Vibrio cholerae RC385]
Length = 572
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KQSASSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|436841522|ref|YP_007325900.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
gi|432170428|emb|CCO23799.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio hydrothermalis
AM13 = DSM 14728]
Length = 1045
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 4/116 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFK-VEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
LV +D M + + I + G + ENGK AVD F F I+F+D++MPVMDG E
Sbjct: 928 LVAEDSKMNQILLRKIFEKNGLSDYLIVENGKYAVDAFTQSHDFDIIFMDIQMPVMDGFE 987
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
AT+A+R + +IV +T+ + E E + G+D TKP + LL+EL K
Sbjct: 988 ATRAIRKLHSPVRIVALTANSGEEYWEQCRECGMDSRITKPFN---VDDLLDELSK 1040
>gi|357635000|ref|ZP_09132878.1| histidine kinase [Desulfovibrio sp. FW1012B]
gi|357583554|gb|EHJ48887.1| histidine kinase [Desulfovibrio sp. FW1012B]
Length = 310
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 76/128 (59%), Gaps = 6/128 (4%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
S +P L+ +D+P+ R +L++ G + A +G+EA++ RT A F IV +D+ M
Sbjct: 183 SPGKPLKILLAEDNPINRLFLQELLRNEGHSITYAADGQEALEALRTEA-FDIVLMDISM 241
Query: 82 PVMDGIEATKAMR---AMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
P MDGIEAT+ +R + K+ +K IV +T+ + E F++AG+D +KP+ AK+
Sbjct: 242 PRMDGIEATRRIRESVSGKINAKIPIVALTAHAFRVDAERFLKAGMDGYLSKPIDPAKLK 301
Query: 137 PLLEELQK 144
+L + K
Sbjct: 302 EILGKYAK 309
>gi|386829552|ref|ZP_10116659.1| PAS domain S-box [Beggiatoa alba B18LD]
gi|386430436|gb|EIJ44264.1| PAS domain S-box [Beggiatoa alba B18LD]
Length = 1259
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/115 (38%), Positives = 73/115 (63%), Gaps = 8/115 (6%)
Query: 21 VSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF--HIVFI 77
++ N+P Y LVV+D R + S +L+ +GF V+ A NG+EAV ++ AK+ H++++
Sbjct: 1047 LAPNQPVYRLLVVEDRWENRELISRLLEPLGFAVQKAANGQEAVAIW---AKWQPHLIWM 1103
Query: 78 DMEMPVMDGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
D+ MPVMDG+ AT++++A K + I+ +T+ E ER ++AG D TKP
Sbjct: 1104 DIRMPVMDGVAATRSIKARKTGHRTVIIALTAGAFEEERAAMLEAGCDDFVTKPF 1158
>gi|357633576|ref|ZP_09131454.1| signal transduction histidine kinase with CheB and CheR activity
[Desulfovibrio sp. FW1012B]
gi|357582130|gb|EHJ47463.1| signal transduction histidine kinase with CheB and CheR activity
[Desulfovibrio sp. FW1012B]
Length = 1821
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/132 (32%), Positives = 75/132 (56%), Gaps = 7/132 (5%)
Query: 7 GASSSKKARISENPVSKNRPYF-ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
G + ++ A P S+ R L V+DD + + +L+ +G V A++G+EAVD
Sbjct: 1665 GGAPARPAEAGNRPRSQARERLRILFVEDDAVNQMTGKRMLEKLGHAVVAADDGREAVDC 1724
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMR-----AMKVESKIVGVTSRNSETEREVFMQA 120
F +F ++F+D++MP MDG+EAT+A+R + + I+ +T+ ++RE F+ A
Sbjct: 1725 FLR-QEFDLIFMDIQMPRMDGVEATRAIRNAGAPGRRTDLPIIALTAYAMTSDREKFLAA 1783
Query: 121 GLDLCYTKPLTM 132
GLD KP+ +
Sbjct: 1784 GLDDYVAKPVEL 1795
>gi|422910550|ref|ZP_16945185.1| his Kinase A domain protein [Vibrio cholerae HE-09]
gi|341633338|gb|EGS58159.1| his Kinase A domain protein [Vibrio cholerae HE-09]
Length = 570
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S V + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KQSTSSSQQVVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R V+ I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHVDIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|253699183|ref|YP_003020372.1| response regulator receiver protein [Geobacter sp. M21]
gi|251774033|gb|ACT16614.1| response regulator receiver protein [Geobacter sp. M21]
Length = 125
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/115 (30%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +DDP IR++ + +L GF +NG++AV+ + + F +F+D++MPVMDG A
Sbjct: 4 LIAEDDPTIRQMMATLLSRCGFDCRSVDNGRKAVEAWEDES-FDFIFMDVQMPVMDGFTA 62
Query: 90 TKAMRAMKV----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
T+ +R + + I+ +T+ E +R+ + +G+D +KP+ + ++ LL+
Sbjct: 63 TRIIREKEALKGGHTSIIALTAHAMEQDRQQCLDSGMDDYLSKPIDLDELFSLLK 117
>gi|333978015|ref|YP_004515960.1| response regulator receiver protein [Desulfotomaculum kuznetsovii
DSM 6115]
gi|333821496|gb|AEG14159.1| response regulator receiver protein [Desulfotomaculum kuznetsovii
DSM 6115]
Length = 136
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/119 (31%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH--IVFIDMEMPVMDG 86
L+VDD P +R + ++++ G +V AENG A++ R + H ++F+D+ MP+MDG
Sbjct: 8 VLIVDDQPGVRYLLDILIREFGHRVHTAENGLVAIEKVR---QIHPDVIFMDVRMPLMDG 64
Query: 87 IEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
+EA + +R + ++ ++ +T+ SE +E ++ G C +KP + K+ L+++L N
Sbjct: 65 LEALRRIRRIAPDTIVIIMTAYISEQTKEQALKNGALCCMSKPFDIEKVKALIQDLTWN 123
>gi|308125824|ref|ZP_07663531.1| signal transduction histidine kinase [Vibrio parahaemolyticus
K5030]
gi|308111583|gb|EFO49123.1| signal transduction histidine kinase [Vibrio parahaemolyticus
K5030]
Length = 231
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 8/132 (6%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+S P+ + R L+V+D+ + +++ S++L G++ EVAENG+ AV++F+ F I+
Sbjct: 102 LSAAPMRRER---ILLVEDNRVNQKVASLLLSKAGYQFEVAENGQIAVEMFQRDGGFDII 158
Query: 76 FIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+D MPVMDG EATK +RA + ++ I+ +T+ + + + +G+D KP+
Sbjct: 159 LMDCMMPVMDGFEATKQIRAYEASLGLEKTPIIALTASVVDDDIQRCFDSGMDAYVPKPV 218
Query: 131 TMAKIVPLLEEL 142
K++ +E +
Sbjct: 219 RKEKLLHQIENV 230
>gi|242212075|ref|XP_002471873.1| hypothetical histidine kinase [Postia placenta Mad-698-R]
gi|220729061|gb|EED82942.1| hypothetical histidine kinase [Postia placenta Mad-698-R]
Length = 1151
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK---- 71
++EN V PY L+ +D+ + +++ IL+ G +VE+AENG AVD F+ +
Sbjct: 998 VAENDV----PYDILIAEDNLVNQKLAVKILEKYGHQVEIAENGSLAVDAFKARIQRNRP 1053
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCY 126
F I+ +D+ MP M G+EAT+ +RA + I+ +T+ +RE +QAG+D
Sbjct: 1054 FDIILMDVSMPFMGGMEATELIRAYETSHGLDPVPIIALTAHAMIGDRERCLQAGMDDHI 1113
Query: 127 TKPLTMAKIVPLLEEL 142
TKPL + ++ + +L
Sbjct: 1114 TKPLRRSDLINAINKL 1129
>gi|374334750|ref|YP_005091437.1| hybrid sensory histidine kinase BarA [Oceanimonas sp. GK1]
gi|372984437|gb|AEY00687.1| hybrid sensory histidine kinase BarA [Oceanimonas sp. GK1]
Length = 898
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 76/134 (56%), Gaps = 4/134 (2%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
A I+ P + +P L VDD+P ++ S +L +V+ NG+EA++L T ++
Sbjct: 650 APIALPPPASRQPMRVLAVDDNPANLKLISAMLAEQVSQVDTGRNGREALNL-ATTHRYD 708
Query: 74 IVFIDMEMPVMDGIEATKAMR---AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
I+F+D++MPV+DGI+AT+ +R + V + IV VT+ ER+ ++ G+D KP+
Sbjct: 709 IIFMDIQMPVLDGIQATQEIRRQGGLNVHTPIVAVTAHAIAGERDRLLRQGMDDYLAKPI 768
Query: 131 TMAKIVPLLEELQK 144
A + ++ +
Sbjct: 769 DEAILARIINHFAR 782
>gi|167648426|ref|YP_001686089.1| integral membrane sensor hybrid histidine kinase [Caulobacter sp.
K31]
gi|167350856|gb|ABZ73591.1| integral membrane sensor hybrid histidine kinase [Caulobacter sp.
K31]
Length = 627
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 70/126 (55%), Gaps = 6/126 (4%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P+ R L DD+P +++ + +L +G +VE+ +G V+ ++ G F IV +D+
Sbjct: 487 PIESERRLRVLAADDNPTNQKVIAAVLAPLGAEVELVADGAACVEAWKRGG-FDIVLMDI 545
Query: 80 EMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
MPVMDG+EA + +R+++V IV VT+ + E +M AG+D KP+ + K
Sbjct: 546 HMPVMDGVEAARTIRSLEVSEGRKRIPIVAVTANALVHQVEGYMAAGMDGHVAKPIEVTK 605
Query: 135 IVPLLE 140
+ +E
Sbjct: 606 LYDAIE 611
>gi|426405408|ref|YP_007024379.1| signal transduction histidine kinase [Bdellovibrio bacteriovorus
str. Tiberius]
gi|425862076|gb|AFY03112.1| signal transduction histidine kinase [Bdellovibrio bacteriovorus
str. Tiberius]
Length = 838
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 82/148 (55%), Gaps = 5/148 (3%)
Query: 1 MMIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGK 60
M+ E + + + SE +K LV +D + +R+ L +G KVE+A NG+
Sbjct: 574 FMVNLEECAGEVQPQSSEVRFAKIFSGHVLVAEDQIVNQRVAESYLTKLGLKVEIAGNGQ 633
Query: 61 EAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK----VESKIVGVTSRNSETEREV 116
A++ R+ + + ++F+D +MPVM+G EATK +R ++ ++ +V +T+ + ER+
Sbjct: 634 IALEKARSKS-YDLIFMDCQMPVMNGYEATKQLRLLENTLGRKTPVVALTAEGTSGERKS 692
Query: 117 FMQAGLDLCYTKPLTMAKIVPLLEELQK 144
+AG+D TKPL + K++ L K
Sbjct: 693 CYEAGMDDFLTKPLELHKLIETLHRWLK 720
>gi|156974495|ref|YP_001445401.1| Signal transduction histidine kinase [Vibrio harveyi ATCC BAA-1116]
gi|156526089|gb|ABU71175.1| hypothetical protein VIBHAR_02212 [Vibrio harveyi ATCC BAA-1116]
Length = 1054
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + +++ S++L G++ E+AENG+ A+D+F+ F I+ +D MPVMDG EA
Sbjct: 936 LLVEDNTVNQKVASLLLSKAGYQFEIAENGQIALDMFQQDNSFDIILMDCMMPVMDGFEA 995
Query: 90 TKAMRAM-KV----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
TK +RA KV ++ I+ +T+ + + + +G+D KP+ K++ +E
Sbjct: 996 TKEIRAYEKVSGLPKTPIIALTASVVDDDIQRCYDSGMDAYVPKPVRKEKLLHQIE 1051
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + ++I + + G++ ++A NG+EAV++F ++ ++ +D MPVMDG EA
Sbjct: 773 LVVDDNTVNQKIAGLHVTKAGYEFDIAANGQEAVEMFAKN-QYALILMDCMMPVMDGFEA 831
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
TK +R ++ ES I+ +T+ + + + G+D KP
Sbjct: 832 TKRIRQLEKESNRGYQIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 878
>gi|104781536|ref|YP_608034.1| sensor histidine kinase/response regulator [Pseudomonas entomophila
L48]
gi|95110523|emb|CAK15231.1| putative sensor histidine kinase/response regulator [Pseudomonas
entomophila L48]
Length = 1093
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
S N P LVVDD P + L+S+G +V +A+ G+ A+ L++ +F +V D M
Sbjct: 841 SDNGPLHVLVVDDYPANLLLLDKQLRSLGHRVALADQGETALTLWQAN-RFDVVVTDCSM 899
Query: 82 PVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
PVMDG E T+ +R ++ ES I+GVT+ ER+ +++G+D C KP+ +
Sbjct: 900 PVMDGHELTRRIRGLERESMLPACHIIGVTANAQAEERQRCLESGMDECLFKPIGL 955
>gi|432793432|ref|ZP_20027516.1| sensor kinase RcsC [Escherichia coli KTE78]
gi|432799390|ref|ZP_20033412.1| sensor kinase RcsC [Escherichia coli KTE79]
gi|431339095|gb|ELG26157.1| sensor kinase RcsC [Escherichia coli KTE78]
gi|431343256|gb|ELG30220.1| sensor kinase RcsC [Escherichia coli KTE79]
Length = 949
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 75/131 (57%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + + +++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 800 LIEMESDNPANALPLTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 859
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 860 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 918
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 919 MDSCLSKPVTL 929
>gi|147674610|ref|YP_001217001.1| sensor histidine kinase/response regulator [Vibrio cholerae O395]
gi|227117911|ref|YP_002819807.1| sensor histidine kinase/response regulator [Vibrio cholerae O395]
gi|146316493|gb|ABQ21032.1| sensor histidine kinase/response regulator [Vibrio cholerae O395]
gi|227013361|gb|ACP09571.1| sensor histidine kinase/response regulator [Vibrio cholerae O395]
Length = 514
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 73/131 (55%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K + S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 381 KPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 440
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 441 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 500
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 501 SKDIMEVVKRF 511
>gi|153836217|ref|ZP_01988884.1| sensory transduction protein kinase [Vibrio parahaemolyticus AQ3810]
gi|149750492|gb|EDM61237.1| sensory transduction protein kinase [Vibrio parahaemolyticus AQ3810]
Length = 1051
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 8/132 (6%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+S P+ + R L+V+D+ + +++ S++L G++ EVAENG+ AV++F+ F I+
Sbjct: 922 LSAAPMRRER---ILLVEDNRVNQKVASLLLSKAGYQFEVAENGQIAVEMFQRDGGFDII 978
Query: 76 FIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+D MPVMDG EATK +RA + ++ I+ +T+ + + + +G+D KP+
Sbjct: 979 LMDCMMPVMDGFEATKQIRAYEASLGLEKTPIIALTASVVDDDIQRCFDSGMDAYVPKPV 1038
Query: 131 TMAKIVPLLEEL 142
K++ +E +
Sbjct: 1039 RKEKLLHQIENV 1050
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + ++I + + GF +VA NG+EAVD+FRT +++ ++ +D MPVMDG EA
Sbjct: 771 LVVDDNTVNQKIAGLHVTKAGFSFDVAANGEEAVDMFRT-SQYCLILMDCMMPVMDGFEA 829
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
TK +R ++++ I+ +T+ + + + G+D KP
Sbjct: 830 TKQIRQIELKENRTFRIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 876
>gi|28898529|ref|NP_798134.1| histidine kinase [Vibrio parahaemolyticus RIMD 2210633]
gi|260879574|ref|ZP_05891929.1| signal transduction histidine kinase [Vibrio parahaemolyticus
AN-5034]
gi|260894951|ref|ZP_05903447.1| signal transduction histidine kinase [Vibrio parahaemolyticus
Peru-466]
gi|260901039|ref|ZP_05909434.1| response regulator receiver domain protein [Vibrio parahaemolyticus
AQ4037]
gi|28806747|dbj|BAC60018.1| putative histidine kinase [Vibrio parahaemolyticus RIMD 2210633]
gi|308086084|gb|EFO35779.1| signal transduction histidine kinase [Vibrio parahaemolyticus
Peru-466]
gi|308093366|gb|EFO43061.1| signal transduction histidine kinase [Vibrio parahaemolyticus
AN-5034]
gi|308110723|gb|EFO48263.1| response regulator receiver domain protein [Vibrio parahaemolyticus
AQ4037]
Length = 1051
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 8/132 (6%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+S P+ + R L+V+D+ + +++ S++L G++ EVAENG+ AV++F+ F I+
Sbjct: 922 LSAAPMRRER---ILLVEDNRVNQKVASLLLSKAGYQFEVAENGQIAVEMFQRDGGFDII 978
Query: 76 FIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+D MPVMDG EATK +RA + ++ I+ +T+ + + + +G+D KP+
Sbjct: 979 LMDCMMPVMDGFEATKQIRAYEASLGLEKTPIIALTASVVDDDIQRCFDSGMDAYVPKPV 1038
Query: 131 TMAKIVPLLEEL 142
K++ +E +
Sbjct: 1039 RKEKLLHQIENV 1050
Score = 65.9 bits (159), Expect = 5e-09, Method: Composition-based stats.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + ++I + + GF +VA NG+EAVDLFRT +++ ++ +D MPVMDG EA
Sbjct: 771 LVVDDNTVNQKIAGLHVTKAGFSFDVAANGEEAVDLFRT-SQYCLILMDCMMPVMDGFEA 829
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
TK +R ++ + I+ +T+ + + + G+D KP
Sbjct: 830 TKQIRQIEQKENRTFRIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 876
>gi|437643429|ref|ZP_20808416.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
gi|435274612|gb|ELO52713.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 648904 3-6]
Length = 194
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 61 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 119
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 120 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 175
>gi|254423730|ref|ZP_05037448.1| PAS fold family [Synechococcus sp. PCC 7335]
gi|196191219|gb|EDX86183.1| PAS fold family [Synechococcus sp. PCC 7335]
Length = 774
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 79/127 (62%), Gaps = 3/127 (2%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
+E+ +S P L+ +D + +++ ++ S G++ +VA NGKEAV+ ++ A + +V
Sbjct: 628 TESTISIQNPLRILLAEDIALNQKVALYMITSFGYQADVANNGKEAVEALQSHA-YDLVL 686
Query: 77 IDMEMPVMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
+D++MP MDG+EAT+ +RA V+ IV +T+ + +RE + AG++ KP+T +
Sbjct: 687 MDVQMPEMDGLEATRIIRANSNIVQPHIVAMTAHALQGDREECLSAGMNGYIRKPITKDE 746
Query: 135 IVPLLEE 141
++ L++
Sbjct: 747 LLKTLQQ 753
>gi|444424360|ref|ZP_21219818.1| Signal transduction histidine kinase [Vibrio campbellii CAIM 519 =
NBRC 15631]
gi|444242355|gb|ELU53869.1| Signal transduction histidine kinase [Vibrio campbellii CAIM 519 =
NBRC 15631]
Length = 1000
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + +++ S++L G++ E+AENG+ A+D+F+ F I+ +D MPVMDG EA
Sbjct: 882 LLVEDNTVNQKVASLLLSKAGYQFEIAENGQIALDMFQQDNSFDIILMDCMMPVMDGFEA 941
Query: 90 TKAMRAM-KV----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
TK +RA KV ++ I+ +T+ + + + +G+D KP+ K++ +E
Sbjct: 942 TKEIRAYEKVSGLPKTPIIALTASVVDDDIQRCYDSGMDAYVPKPVRKEKLLHQIE 997
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 72/132 (54%), Gaps = 10/132 (7%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
+ ++ +A SE + N+ LVVDD+ + ++I + + G++ ++A NG+EAV++F
Sbjct: 700 SQTALEAAASETSNANNK---ILVVDDNTVNQKIAGLHVTKAGYEFDLAANGQEAVEMFA 756
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK------IVGVTSRNSETEREVFMQAG 121
++ ++ +D MPVMDG EATK +R ++ E I+ +T+ + + + G
Sbjct: 757 KN-QYALILMDCMMPVMDGFEATKRIRQLEKEVHRGYRIPIIALTASVVDDDIQKCFDVG 815
Query: 122 LDLCYTKPLTMA 133
+D KP A
Sbjct: 816 MDDYVPKPFKAA 827
>gi|298528267|ref|ZP_07015671.1| integral membrane sensor hybrid histidine kinase
[Desulfonatronospira thiodismutans ASO3-1]
gi|298511919|gb|EFI35821.1| integral membrane sensor hybrid histidine kinase
[Desulfonatronospira thiodismutans ASO3-1]
Length = 809
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/131 (30%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
+N +P LV +D+P + +L+ +G KV +AE+G +A++L + +F + +
Sbjct: 669 QNHKGAGKPLRILVAEDEPTNQLFAGRLLEYLGHKVMIAEDGSQALELLQQ-HEFDCILM 727
Query: 78 DMEMPVMDGIEATKAMR-----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG+EA +A+R + + I+ +T+ E +REVF QAG++ KP+
Sbjct: 728 DIRMPFMDGLEAARAIRTSRELGARRDVPIIAMTAHAMEGDREVFFQAGMNGYLAKPVQK 787
Query: 133 AKIVPLLEELQ 143
+ +L+ +Q
Sbjct: 788 EDLEKVLQGIQ 798
>gi|153832421|ref|ZP_01985088.1| sensory transduction protein kinase [Vibrio harveyi HY01]
gi|148871450|gb|EDL70313.1| sensory transduction protein kinase [Vibrio harveyi HY01]
Length = 1000
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + +++ S++L G++ E+AENG+ A+D+F+ F I+ +D MPVMDG EA
Sbjct: 882 LLVEDNTVNQKVASLLLSKAGYQFEIAENGQIALDMFQQDNSFDIILMDCMMPVMDGFEA 941
Query: 90 TKAMRAM-KV----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
TK +RA KV ++ I+ +T+ + + + +G+D KP+ K++ +E
Sbjct: 942 TKEIRAYEKVSGLPKTPIIALTASVVDDDIQRCYDSGMDAYVPKPVRKEKLLHQIE 997
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 73/135 (54%), Gaps = 10/135 (7%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
A + ++ +A SE + N+ LVVDD+ + ++I + + G++ ++A NG+EAV+
Sbjct: 697 ARFSQTALEADASETSNTNNK---ILVVDDNTVNQKIAGLHVTKAGYEFDLAANGQEAVE 753
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK------IVGVTSRNSETEREVFM 118
+F ++ ++ +D MPVMDG EATK +R ++ E I+ +T+ + + +
Sbjct: 754 MFAKN-QYALILMDCMMPVMDGFEATKRIRQLEKEVNRGYRIPIIALTASVVDDDIQKCF 812
Query: 119 QAGLDLCYTKPLTMA 133
G+D KP A
Sbjct: 813 DVGMDDYVPKPFKAA 827
>gi|346975181|gb|EGY18633.1| histidine kinase G7 [Verticillium dahliae VdLs.17]
Length = 1292
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 49/146 (33%), Positives = 82/146 (56%), Gaps = 9/146 (6%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I SS A IS P + +RP F L+VDD+ + +I + +K +G + + NG++
Sbjct: 1129 IIETNSRSSDSTATIS--PQACDRPQF-LIVDDNIINLKILCIFMKRLGREHCTSMNGQQ 1185
Query: 62 AVDLFRTGA-KFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETERE 115
A+D F KF + +D+ MPVMDG+E+T+ +R + K I+ +T S+ R+
Sbjct: 1186 ALDAFSANPEKFCCILMDINMPVMDGLESTRRIRQFERLHKLDPTTIIAITGLGSQDARK 1245
Query: 116 VFMQAGLDLCYTKPLTMAKIVPLLEE 141
+GLDL TKP+ M ++ +L+E
Sbjct: 1246 EGFASGLDLFLTKPVRMRELRTILKE 1271
>gi|328856197|gb|EGG05319.1| hypothetical protein MELLADRAFT_78083 [Melampsora larici-populina
98AG31]
Length = 477
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/116 (34%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L+V+DD + R + IL+ +G K+ +G EAV + +F +VF+D+ MP MD
Sbjct: 315 PPTVLLVEDDQIYRSLSGRILEFIGCKMVTCNDGIEAVQVM-AQQQFDLVFMDIYMPFMD 373
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
GI AT +R + + I+ +TS + TE ++ G++ C KP T K++ +LE+
Sbjct: 374 GILATSLIRQFDLFTPIISMTSNFTPTEINKYLGIGMNDCLPKPFTKEKMLKMLEK 429
>gi|421351208|ref|ZP_15801573.1| his Kinase A domain protein [Vibrio cholerae HE-25]
gi|395951653|gb|EJH62267.1| his Kinase A domain protein [Vibrio cholerae HE-25]
Length = 570
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/131 (29%), Positives = 73/131 (55%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K + S V + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KPSTSSSQQVVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLDRNHA 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|386815517|ref|ZP_10102735.1| histidine kinase [Thiothrix nivea DSM 5205]
gi|386420093|gb|EIJ33928.1| histidine kinase [Thiothrix nivea DSM 5205]
Length = 448
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 72/120 (60%), Gaps = 2/120 (1%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N + LVV+D + + + +L +G+KV +AE G +AV+L R+ F +V +D++MP
Sbjct: 322 NTGHHVLVVEDHKVNQLVAKGMLTKLGYKVTLAETGFQAVELLRSQDDFDLVLMDIQMPG 381
Query: 84 MDGIEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
M+G+EAT+ +R + I+ +T+ + + + ++ AG+D C TKP+ + ++ L E
Sbjct: 382 MNGVEATRIIRNEFPDRPLPILALTANAMKGDEQEYLAAGMDACLTKPIQIVQLAAALRE 441
>gi|221635617|ref|YP_002523493.1| transcriptional regulatory protein ResD [Thermomicrobium roseum DSM
5159]
gi|221157956|gb|ACM07074.1| transcriptional regulatory protein ResD [Thermomicrobium roseum DSM
5159]
Length = 126
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 69/119 (57%), Gaps = 7/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAE--NGKEAVDLFRTGAKFHIVFIDMEMPVMDGI 87
L+ DD M+R +H L+ VG++VE +E NG+EA+ LF G KF +V +D MP MDGI
Sbjct: 5 LIADDSKMMRVMHVRSLRQVGYEVEASEANNGEEALALFEPG-KFDLVIVDWNMPGMDGI 63
Query: 88 EATKAMR----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
E +A R + I+ +TS+++E + +AG+D TKP+T I LE L
Sbjct: 64 EFVRAAREKEQGAGKRTPILMITSQSTEEQMLKAKEAGVDNLLTKPVTPEAIGAALEML 122
>gi|433657885|ref|YP_007275264.1| CheY-like receiver [Vibrio parahaemolyticus BB22OP]
gi|432508573|gb|AGB10090.1| CheY-like receiver [Vibrio parahaemolyticus BB22OP]
Length = 1051
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 8/132 (6%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+S P+ + R L+V+D+ + +++ S++L G++ EVAENG+ AV++F+ F I+
Sbjct: 922 LSAAPMRRER---ILLVEDNRVNQKVASLLLSKAGYQFEVAENGQIAVEMFQRDGGFDII 978
Query: 76 FIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+D MPVMDG EATK +RA + ++ I+ +T+ + + + +G+D KP+
Sbjct: 979 LMDCMMPVMDGFEATKQIRAYEASLGLEKTPIIALTASVVDDDIQRCFDSGMDAYVPKPV 1038
Query: 131 TMAKIVPLLEEL 142
K++ +E +
Sbjct: 1039 RKEKLLHQIENV 1050
Score = 66.2 bits (160), Expect = 4e-09, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 64/107 (59%), Gaps = 7/107 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + ++I + + GF +VA NG+EAVD+FRT +++ ++ +D MPVMDG EA
Sbjct: 771 LVVDDNTVNQKIAGLHVTKAGFSFDVAANGEEAVDMFRT-SQYCLILMDCMMPVMDGFEA 829
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
TK +R ++++ I+ +T+ + + + G+D KP
Sbjct: 830 TKQIRQIELKENRTFRIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 876
>gi|417323449|ref|ZP_12109977.1| putative histidine kinase [Vibrio parahaemolyticus 10329]
gi|328468861|gb|EGF39821.1| putative histidine kinase [Vibrio parahaemolyticus 10329]
Length = 1051
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/132 (31%), Positives = 78/132 (59%), Gaps = 8/132 (6%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+S P+ + R L+V+D+ + +++ S++L G++ EVAENG+ AV++F+ F I+
Sbjct: 922 LSAAPMRRER---ILLVEDNRVNQKVASLLLSKAGYQFEVAENGQIAVEMFQRDGGFDII 978
Query: 76 FIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+D MPVMDG EATK +RA + ++ I+ +T+ + + + +G+D KP+
Sbjct: 979 LMDCMMPVMDGFEATKQIRAYEASLGLEKTPIIALTASVVDDDIQRCFDSGMDAYVPKPV 1038
Query: 131 TMAKIVPLLEEL 142
K++ +E +
Sbjct: 1039 RKEKLLHQIENV 1050
Score = 65.5 bits (158), Expect = 8e-09, Method: Composition-based stats.
Identities = 37/107 (34%), Positives = 63/107 (58%), Gaps = 7/107 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + ++I + GF +VA NG+EAVD+FRT +++ ++ +D MPVMDG EA
Sbjct: 771 LVVDDNTVNQKIAGLHATKAGFSFDVAANGEEAVDMFRT-SQYCLILMDCMMPVMDGFEA 829
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
TK +R ++++ I+ +T+ + + + G+D KP
Sbjct: 830 TKQIRQIELKENRTFRIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 876
>gi|407069151|ref|ZP_11099989.1| two-component sensor [Vibrio cyclitrophicus ZF14]
Length = 791
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D + +++ M+LK +GF+V++A+NG+ V+ F+ ++ ++F+D +MPV+DG EA
Sbjct: 660 LVVEDSRVNQQVAKMMLKKLGFEVDIADNGEIGVEKFKAN-EYEMIFMDCQMPVLDGFEA 718
Query: 90 TKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
TK +R ++ +S IV +T+ + ++ + G+D KP+ K+ ++E
Sbjct: 719 TKQIRVLEEDSSKHIPIVALTANVVQRDKHLCFDVGMDEFLPKPVNQGKLREIVE 773
>gi|117619875|ref|YP_855359.1| hybrid sensory histidine kinase BarA [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117561282|gb|ABK38230.1| sensor protein BarA [Aeromonas hydrophila subsp. hydrophila ATCC
7966]
Length = 903
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L VDD+ ++ + +LK + +V V +NGKEAV L ++ F I+F+D++MP+MDGI A
Sbjct: 668 LAVDDNAANLKLIAAMLKEMVSQVVVCKNGKEAVRLAQS-QPFDIIFMDIQMPIMDGISA 726
Query: 90 TKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+A+R ++ E+ IV VT+ ERE ++ G+D KP+ A + L+ +
Sbjct: 727 TQAIRSQSLNTETPIVAVTAHAILGERERLIRQGMDDYLAKPIDEAMLAKLITDF 781
>gi|410464424|ref|ZP_11317860.1| PAS domain S-box [Desulfovibrio magneticus str. Maddingley MBC34]
gi|409982461|gb|EKO38914.1| PAS domain S-box [Desulfovibrio magneticus str. Maddingley MBC34]
Length = 667
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGF-KVEVAENGKEAV----DLFRTGAKFHIVFIDMEMPV 83
ALV +D+P R + IL+ +G + + A +G+EAV D A +H++F+D+ MP+
Sbjct: 542 ALVAEDNPYNRFLLQKILQKLGVGQADFASDGQEAVRMVLDARDADAPYHVIFMDVRMPI 601
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
+DG+EA +++R V + I+ +T++ +E + QAG++ ++KP + I +L E+
Sbjct: 602 LDGLEAARSLREYGVTTPIIALTAQAAEDDNAQCRQAGMNAYFSKPYRINDIEAVLAEIA 661
Query: 144 KN 145
N
Sbjct: 662 AN 663
>gi|197116920|ref|YP_002137347.1| response receiver [Geobacter bemidjiensis Bem]
gi|197086280|gb|ACH37551.1| response receiver [Geobacter bemidjiensis Bem]
Length = 125
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +DDP IR++ + +L GF +NG++AV+ + F +F+D++MPVMDG A
Sbjct: 4 LVAEDDPTIRQMMATLLSRCGFDCRSVDNGRKAVEAWED-ETFDFIFMDVQMPVMDGFAA 62
Query: 90 TKAMRAMKV----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
T+ +R + + I+ +T+ E +R+ + +G+D +KP+ + ++ LL+
Sbjct: 63 TRMIREKEALKGGHTPIIALTAHAMEQDRQQCLDSGMDDYLSKPIDLDELFSLLK 117
>gi|388601250|ref|ZP_10159646.1| Signal transduction histidine kinase [Vibrio campbellii DS40M4]
Length = 1000
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + +++ S++L G++ E+AENG+ A+D+F+ F I+ +D MPVMDG EA
Sbjct: 882 LLVEDNTVNQKVASLLLSKAGYQFEIAENGQIALDMFQQDNSFDIILMDCMMPVMDGFEA 941
Query: 90 TKAMRAM-KV----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
TK +RA KV ++ I+ +T+ + + + +G+D KP+ K++ +E
Sbjct: 942 TKEIRAYEKVSGLPKTPIIALTASVVDDDIQRCYDSGMDAYVPKPVRKEKLLHQIE 997
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 73/132 (55%), Gaps = 10/132 (7%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
+ ++ +A SE + N+ LVVDD+ + ++I + + G++ ++A NG+EAV++F
Sbjct: 700 SQTALEAAASETSNANNK---ILVVDDNTVNQKIAGLHVTKAGYEFDLAANGQEAVEMFA 756
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVE------SKIVGVTSRNSETEREVFMQAG 121
++ ++ +D MPVMDG EATK +R ++ E + I+ +T+ + + + G
Sbjct: 757 KN-QYALILMDCMMPVMDGFEATKRIRQLEKEVHRGYRTPIIALTASVVDDDIQKCFDVG 815
Query: 122 LDLCYTKPLTMA 133
+D KP A
Sbjct: 816 MDDYVPKPFKAA 827
>gi|229523471|ref|ZP_04412876.1| signal transduction histidine kinase [Vibrio cholerae bv. albensis
VL426]
gi|229337052|gb|EEO02069.1| signal transduction histidine kinase [Vibrio cholerae bv. albensis
VL426]
Length = 572
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 73/131 (55%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K + S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KPSTSSSQKIVNVKKHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|254446138|ref|ZP_05059614.1| response regulator receiver domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198260446|gb|EDY84754.1| response regulator receiver domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 271
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 77/125 (61%), Gaps = 6/125 (4%)
Query: 15 RISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI 74
++ EN ++ RP LV DD+ + R++ +IL+ +G+ AENG++A+ +++ G +
Sbjct: 132 QLDEN-FAQRRPLKILVADDNEINRKVIRIILQKLGYSCVEAENGEDALQMYQRG-DYDY 189
Query: 75 VFIDMEMPVMDGIEATKAMRAM----KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+F+D++MP MDGIE T+A+R K +++I+ VT+ S+ R + G++ KP+
Sbjct: 190 IFMDLDMPEMDGIETTQAIREAEGDGKRKTEIIAVTANVSQETRLKCRRVGMNGYLEKPI 249
Query: 131 TMAKI 135
T + I
Sbjct: 250 TASII 254
>gi|254443113|ref|ZP_05056589.1| response regulator receiver domain protein [Verrucomicrobiae
bacterium DG1235]
gi|198257421|gb|EDY81729.1| response regulator receiver domain protein [Verrucomicrobiae
bacterium DG1235]
Length = 601
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/121 (35%), Positives = 75/121 (61%), Gaps = 5/121 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
+P LVV+DD + +++ + +LK +G K +NGK+AV++ R GA F +V +D+ MPVM
Sbjct: 470 QPPEVLVVEDDLVNQKVVTALLKKLGAKTVCVDNGKKAVEILRPGA-FDLVLMDISMPVM 528
Query: 85 DGIEATKAMR---AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
DGIEAT+ +R A+K + IV +T+ + + +AG++ TKP ++ ++ +
Sbjct: 529 DGIEATEEIRKNDALK-DLPIVALTAHSYSKSEKACFEAGMNGFLTKPAKADQLFEIISK 587
Query: 142 L 142
L
Sbjct: 588 L 588
>gi|46117570|ref|XP_384803.1| hypothetical protein FG04627.1 [Gibberella zeae PH-1]
Length = 1153
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 75/131 (57%), Gaps = 14/131 (10%)
Query: 19 NPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFI 77
NP S + + L+VDD+ + ++ M +K + + A NG+EAV ++ A + VF+
Sbjct: 1023 NPESTEKTF--LLVDDNSINLKMLVMFMKKLKLQYSTASNGQEAVTKYKENPASYKCVFM 1080
Query: 78 DMEMPVMDGIEATKAMRAMKVES--------KIVGVTSRNSETEREVFMQAGLDLCYTKP 129
D+ MPVM+G EAT+ +R + E I G+ SR+++ E + +G+DL TKP
Sbjct: 1081 DISMPVMNGFEATRHIRTFEAECAIPKCSIFAITGLASRDAQQEA---VLSGIDLFLTKP 1137
Query: 130 LTMAKIVPLLE 140
+ +A++ LLE
Sbjct: 1138 IALAEMKHLLE 1148
>gi|325107448|ref|YP_004268516.1| PAS/PAC sensor hybrid histidine kinase [Planctomyces brasiliensis DSM
5305]
gi|324967716|gb|ADY58494.1| PAS/PAC sensor hybrid histidine kinase [Planctomyces brasiliensis DSM
5305]
Length = 1168
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/127 (30%), Positives = 71/127 (55%), Gaps = 4/127 (3%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIV 75
P + PY L+ +D P +R+ S +L+ +G VE+AENG A+D F +G+ F ++
Sbjct: 1020 PDQASFPYRILLAEDGPDNQRLISFLLRKLGATVEIAENGAVALDRFHAAAESGSPFELL 1079
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
D++MP MDG T+ +R+ I+ +T+ +R+ + AG + TKP+ + +
Sbjct: 1080 VTDIQMPEMDGYTLTRTLRSEGSTIPILALTAHAMAEDRQKCLAAGCNEFLTKPVKKSDL 1139
Query: 136 VPLLEEL 142
+ LE++
Sbjct: 1140 INALEQI 1146
>gi|359437875|ref|ZP_09227924.1| hypothetical protein P20311_1967 [Pseudoalteromonas sp. BSi20311]
gi|358027362|dbj|GAA64173.1| hypothetical protein P20311_1967 [Pseudoalteromonas sp. BSi20311]
Length = 1573
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK--FHIVFIDMEM 81
++P L+V+D+P+ +++ +++LK + +V VAENG++A+++ K F +V +D +M
Sbjct: 1447 DKPAEILLVEDNPINQQVSTLMLKKLSCEVTVAENGQQAIEILSAHEKGHFSLVLMDCQM 1506
Query: 82 PVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
PVMDG AT A+R KI+ +T+ E++++ + AG+D +KP+ + +
Sbjct: 1507 PVMDGYSATTAIRNNAAGEQHKAIKIIALTANAMESDKQRCIDAGMDDYLSKPIQLDVLK 1566
Query: 137 PLLEE 141
LE+
Sbjct: 1567 QKLEQ 1571
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-----FHIVFIDMEMPVM 84
LVVDD+ R + S L G VE+A + K+A+++ K + I +DM+MP M
Sbjct: 1302 LVVDDNQTNRLVISEQLGHWGAHVELASDAKQALEMCENRIKNQQKVYDIAVLDMQMPDM 1361
Query: 85 DGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
DGIE K ++A +V +TS + + + AG + KP+T A ++ L +
Sbjct: 1362 DGIELCKILKADANYQPMPLVMMTSIAGMEDAQRYSDAGFQAYFPKPVTTADLISALSVI 1421
Query: 143 QKN 145
N
Sbjct: 1422 ANN 1424
>gi|332663407|ref|YP_004446195.1| integral membrane sensor hybrid histidine kinase [Haliscomenobacter
hydrossis DSM 1100]
gi|332332221|gb|AEE49322.1| integral membrane sensor hybrid histidine kinase [Haliscomenobacter
hydrossis DSM 1100]
Length = 597
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 73/115 (63%), Gaps = 2/115 (1%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P LVV+D+ + +++ I++ G+++++ ENG+EA+ T + ++F+D++MP +D
Sbjct: 472 PLSILVVEDNMLNQKLILRIMEHFGYQIDIVENGREALHKLNTQV-YDLIFMDVQMPELD 530
Query: 86 GIEATKAMRAMKV-ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
GIE T+A+R M + + IV +T+ + ++E AG++ KP++M KI L+
Sbjct: 531 GIETTQALRQMPINQPYIVAMTAAAAPEDQEACFAAGMNDYVVKPISMTKIRALI 585
>gi|301022436|ref|ZP_07186318.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 69-1]
gi|300397537|gb|EFJ81075.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 69-1]
Length = 933
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + +++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 784 LIEMESDDPANALPLTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 843
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 844 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 902
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 903 MDSCLSKPVTL 913
>gi|432602778|ref|ZP_19839022.1| sensor kinase RcsC [Escherichia coli KTE66]
gi|431141352|gb|ELE43117.1| sensor kinase RcsC [Escherichia coli KTE66]
Length = 949
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + +++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 800 LIEMESDDPANALPLTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 859
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 860 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 918
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 919 MDSCLSKPVTL 929
>gi|145550776|ref|XP_001461066.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124428898|emb|CAK93674.1| unnamed protein product [Paramecium tetraurelia]
Length = 779
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/153 (30%), Positives = 81/153 (52%), Gaps = 15/153 (9%)
Query: 6 EGASSSKKARISENPVSK-NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
E S ++ RI + +K N ++VDD+P + ILKS+ FKV A+NG EA+
Sbjct: 627 ESEDSIQQIRIQKKDENKCNCLQCIMIVDDEPFNNLVLESILKSLHFKVVKAQNGLEALK 686
Query: 65 LFRTGAK---------FHIVFIDMEMPVMDGIEATKAM-----RAMKVESKIVGVTSRNS 110
L+R F+ +F+D +MP+M+G+E+TKA+ + +V+ I+G T+ ++
Sbjct: 687 LYREQYDLCDIDECKLFYAIFMDYQMPIMNGLESTKAIIEECNKLKQVQPTIIGCTAFSA 746
Query: 111 ETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
+ + AG+ KP++ I +L LQ
Sbjct: 747 TDDINELLNAGMKSVCIKPISKDSIKQILSHLQ 779
>gi|336373194|gb|EGO01532.1| SSK1, two-component response regulator activity [Serpula lacrymans
var. lacrymans S7.3]
gi|336386040|gb|EGO27186.1| SKN7, signal transduction response regulator [Serpula lacrymans
var. lacrymans S7.9]
Length = 624
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 56/88 (63%), Gaps = 1/88 (1%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L+VDD+P+ + I S +K K +VA+NG+EAV + G FH++ +D++MPVMD
Sbjct: 306 PISVLIVDDNPINQTILSTFMKKKKIKFDVAKNGEEAVQKWHCGG-FHLILMDIQMPVMD 364
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETE 113
GIEATK +R ++ S G T +++
Sbjct: 365 GIEATKEIRRLENLSASSGYTPSTPQSD 392
>gi|319956174|ref|YP_004167437.1| integral membrane sensor hybrid histidine kinase [Nitratifractor
salsuginis DSM 16511]
gi|319418578|gb|ADV45688.1| integral membrane sensor hybrid histidine kinase [Nitratifractor
salsuginis DSM 16511]
Length = 800
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 77/121 (63%), Gaps = 6/121 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D+ + +++ IL+ +G V++A NG EA +L R G + ++F+D++MPVM+GIEA
Sbjct: 523 LVVEDNIINQKLVKNILEGLGLDVDIANNGLEAFEL-RRGNDYDLIFMDIQMPVMNGIEA 581
Query: 90 TKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
T + + + + IV +T+ + +RE F+ G+D +KP+ M++++ +L + K
Sbjct: 582 THEILEYEEDEELPHVPIVALTANALKGDRERFLAEGMDEYISKPIEMSELIYILNKFLK 641
Query: 145 N 145
+
Sbjct: 642 D 642
>gi|194334444|ref|YP_002016304.1| histidine kinase [Prosthecochloris aestuarii DSM 271]
gi|194312262|gb|ACF46657.1| histidine kinase [Prosthecochloris aestuarii DSM 271]
Length = 676
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 78/121 (64%), Gaps = 6/121 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP+ L+V+D+ + +++ +++ +G+++++A NG+EAV+ + ++ +V +D++MPVM
Sbjct: 544 RPHRILLVEDNVINQKVAQAMIEKIGYEIDIAVNGEEAVEALQQ-KQYGLVLMDLQMPVM 602
Query: 85 DGIEATKAMR-----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
DG EAT+ +R A +V +T+ + +RE+ ++AG+D +KP+ ++ +L
Sbjct: 603 DGFEATRRIRKFGGLASNARVPVVAMTANATREDRELCLRAGMDDYLSKPVERQVLLDML 662
Query: 140 E 140
+
Sbjct: 663 Q 663
>gi|444376284|ref|ZP_21175531.1| transcriptional regulator [Enterovibrio sp. AK16]
gi|443679643|gb|ELT86296.1| transcriptional regulator [Enterovibrio sp. AK16]
Length = 998
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/143 (32%), Positives = 76/143 (53%), Gaps = 4/143 (2%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E + K++ NP + + LV +D+P + + +++ G V++ NG EAV+
Sbjct: 701 ESGEVTSKSKQDINPTNISDNLRILVAEDNPANQIVLRTMMEFSGISVDIVSNGVEAVEA 760
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGL 122
+ + IV +D+ MP MDG+EATK +RAM +K IV +T+ +RE F++ G+
Sbjct: 761 V-SRIPYDIVLMDISMPHMDGMEATKRIRAMNTPAKDVVIVALTAHALRGDREHFIELGM 819
Query: 123 DLCYTKPLTMAKIVPLLEELQKN 145
D +KP T I+ L Q N
Sbjct: 820 DDFVSKPFTRQSILDCLNRWQPN 842
>gi|354584519|ref|ZP_09003413.1| histidine kinase [Paenibacillus lactis 154]
gi|353194040|gb|EHB59543.1| histidine kinase [Paenibacillus lactis 154]
Length = 560
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 74/120 (61%), Gaps = 5/120 (4%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMP 82
N+P ++VDD P+ R++ +L +G + ++AENGK+AVDL + + ++F+D++MP
Sbjct: 419 NQPRI-MIVDDHPINRKLMDSMLGKMGLRADMAENGKQAVDLAASSKTSYDLIFMDLQMP 477
Query: 83 VMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
VMDG+EA + +R + E +V +T+ + ++ +AG+D +KP+ + + LL
Sbjct: 478 VMDGLEAARQIRGLCSEEDRPVLVAMTANVMDGIQKRCQEAGMDEYLSKPVKFSCVEQLL 537
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 39/72 (54%), Gaps = 1/72 (1%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
+ P L+VDD P +L S + + A +G+EA+ + F ++ +D++MP
Sbjct: 4 HEPIHILLVDDRPENLLALEAVLDSEQYTLVKATSGEEALR-YLLKYDFAVIVLDVQMPG 62
Query: 84 MDGIEATKAMRA 95
MDGIE + ++A
Sbjct: 63 MDGIETARLIKA 74
>gi|419920624|ref|ZP_14438736.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli KD2]
gi|432543829|ref|ZP_19780672.1| sensor kinase RcsC [Escherichia coli KTE236]
gi|432549319|ref|ZP_19786087.1| sensor kinase RcsC [Escherichia coli KTE237]
gi|432622468|ref|ZP_19858499.1| sensor kinase RcsC [Escherichia coli KTE76]
gi|388384508|gb|EIL46237.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli KD2]
gi|431074239|gb|ELD81803.1| sensor kinase RcsC [Escherichia coli KTE236]
gi|431079597|gb|ELD86551.1| sensor kinase RcsC [Escherichia coli KTE237]
gi|431159268|gb|ELE59825.1| sensor kinase RcsC [Escherichia coli KTE76]
Length = 949
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + +++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 800 LIEMESDDPANALPLTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 859
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 860 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 918
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 919 MDSCLSKPVTL 929
>gi|331683895|ref|ZP_08384491.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli H299]
gi|331078847|gb|EGI50049.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli H299]
Length = 949
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + +++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 800 LIEMESDDPANALPLTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 859
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 860 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 918
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 919 MDSCLSKPVTL 929
>gi|293410582|ref|ZP_06654158.1| hypothetical protein ECEG_01547 [Escherichia coli B354]
gi|432719340|ref|ZP_19954309.1| sensor kinase RcsC [Escherichia coli KTE9]
gi|291471050|gb|EFF13534.1| hypothetical protein ECEG_01547 [Escherichia coli B354]
gi|431263152|gb|ELF55141.1| sensor kinase RcsC [Escherichia coli KTE9]
Length = 949
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + +++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 800 LIEMESDDPANALPLTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 859
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 860 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 918
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 919 MDSCLSKPVTL 929
>gi|315649482|ref|ZP_07902567.1| histidine kinase [Paenibacillus vortex V453]
gi|315274955|gb|EFU38330.1| histidine kinase [Paenibacillus vortex V453]
Length = 559
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 71/113 (62%), Gaps = 3/113 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD P+ R++ +LK +G ++AE+GK+AVD+ + I+F+D++MPVMDG+EA
Sbjct: 424 LIVDDHPINRKLMDSMLKKMGMSADMAEDGKQAVDMVAGPKVYDIIFMDLQMPVMDGLEA 483
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
+ +R MK + +V +T+ + ++ AG+D +KP+ ++ + LL
Sbjct: 484 ARLIRQMKHGADAPILVAMTANVMDGIQKRCSDAGMDEYISKPVKISCVKHLL 536
Score = 37.4 bits (85), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 47/95 (49%), Gaps = 2/95 (2%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
+ P L+VDD P +L S + + A +G+EA+ + F ++ +D++MP
Sbjct: 4 HEPIHILLVDDRPENLLALEAVLDSEQYTLIKATSGEEALR-YLLKYDFAVIVLDVQMPG 62
Query: 84 MDGIEATKAMRAMKVESKI-VGVTSRNSETEREVF 117
MDGIE + ++A I + S NS+ +F
Sbjct: 63 MDGIETARLIKARDKTKDIPIIFISANSKDAEHLF 97
>gi|32472478|ref|NP_865472.1| receptor-like histidine kinase BpdS [Rhodopirellula baltica SH 1]
gi|32443714|emb|CAD73156.1| receptor-like histidine kinase BpdS [Rhodopirellula baltica SH 1]
Length = 1998
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/114 (41%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF-HIVFIDMEMPVMDGIE 88
LVVDD RR+ S++L+ G +V++ NG+EAVD R+ IV +DM+MPVMDG
Sbjct: 1696 LVVDDCETNRRLLSLLLQDAGAEVDIRCNGREAVDALRSDPSMVDIVLMDMQMPVMDGYT 1755
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREV-FMQAGLDLCYTKPLTMAKIVPLLEE 141
AT A+RA ++ IV +T+ N+ T EV +AG TKPL + ++ + E
Sbjct: 1756 ATSALRAQGFQAPIVALTA-NAMTGDEVRCREAGCTDYQTKPLDLNALLQCVAE 1808
>gi|71908559|ref|YP_286146.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase, HAMP region:histidine
kinase A, N-terminal, partial [Dechloromonas aromatica
RCB]
gi|71848180|gb|AAZ47676.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase, HAMP region:Histidine
kinase A, N-terminal [Dechloromonas aromatica RCB]
Length = 777
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/103 (37%), Positives = 68/103 (66%), Gaps = 3/103 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD+P+ R I ++L+ + F+++ AENG+EA+ L + ++ +DM+MPVMDG+EA
Sbjct: 645 LLVDDEPINREITQILLEDLHFRIDSAENGEEALAL-ACIYPYDLILMDMQMPVMDGLEA 703
Query: 90 TKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +RA+ + I+ +T+ +RE + AG+D TKP+
Sbjct: 704 TRRIRALPDGHRFLIIAMTANAFSEDRERCLAAGMDDFTTKPI 746
>gi|386829452|ref|ZP_10116559.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Beggiatoa alba B18LD]
gi|386430336|gb|EIJ44164.1| response regulator containing a CheY-like receiver domain and a
GGDEF domain [Beggiatoa alba B18LD]
Length = 407
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 79/136 (58%), Gaps = 4/136 (2%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
A +S AR++ V K+ Y L+V+D+ + + + +L ++G++ +V NG EAV
Sbjct: 141 APASATARVASTSVDKSH-YNILLVEDNQVNCIVATNMLNALGYQTDVVYNGCEAVTAC- 198
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLC 125
++ ++ +D+ MP MDG EAT+ +R ++ I+ VT+ S T+ ++ Q G++ C
Sbjct: 199 ANKQYDLLLMDIRMPTMDGTEATQLIREYPNYADTPIIAVTANTSATDLILYKQVGMNEC 258
Query: 126 YTKPLTMAKIVPLLEE 141
KPLT+ + +L++
Sbjct: 259 LPKPLTIETLRNILDK 274
Score = 68.6 bits (166), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/115 (33%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD + R + ILK +G +V A NGKEAV+ + + +V +D+ MPVM G+EA
Sbjct: 13 LLVDDTAVNRLVAGSILKELGCQVAEATNGKEAVEAVISDTDYDLVLMDINMPVMSGLEA 72
Query: 90 TKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
+R ++ + +V +T+ S+ ER+ G D KP+T+ + LL++
Sbjct: 73 IHVIRTVESSDSHTTVVALTA--SDAERQQLNNVGFDDILPKPVTVDNLTTLLQK 125
>gi|432617322|ref|ZP_19853436.1| sensor kinase RcsC [Escherichia coli KTE75]
gi|431153742|gb|ELE54637.1| sensor kinase RcsC [Escherichia coli KTE75]
Length = 949
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + +++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 800 LIEMESDDPANALPLTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 859
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 860 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 918
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 919 MDSCLSKPVTL 929
>gi|145551143|ref|XP_001461249.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124429082|emb|CAK93876.1| unnamed protein product [Paramecium tetraurelia]
Length = 766
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 14/128 (10%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK---------FHIVFIDME 80
++VDD+P + IL+S+ FKV AENG EA+ L+R F+ +F+D +
Sbjct: 639 MIVDDEPFNNLVLEQILRSLNFKVIKAENGLEALSLYREQYNLCEMEECKLFYAIFMDYQ 698
Query: 81 MPVMDGIEATKA-----MRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
MP+M+G+E+TKA ++ ++++ I+G T+ ++ + + AG+ KP+ I
Sbjct: 699 MPIMNGLESTKAIIEECIKLKQIQTNIIGCTAFSATDDINELLNAGMKNVCIKPINKDSI 758
Query: 136 VPLLEELQ 143
+L LQ
Sbjct: 759 KRILSHLQ 766
>gi|403417591|emb|CCM04291.1| predicted protein [Fibroporia radiculosa]
Length = 1431
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 77/136 (56%), Gaps = 13/136 (9%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK---- 71
++EN V PY L+ +D+ + +++ IL+ G +VE+AENG+ AVD F+ +
Sbjct: 1271 VAENDV----PYDILIAEDNLVNQKLAVKILEKYGHQVEIAENGQLAVDAFKARIQRNRP 1326
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCY 126
F I+ +D+ MP M G+EAT+ +RA + I+ +T+ +RE +QAG+D
Sbjct: 1327 FDIILMDVSMPFMGGMEATEHIRAYETSHGLDPVPIIALTAHAMIGDRERCLQAGMDDHI 1386
Query: 127 TKPLTMAKIVPLLEEL 142
TKPL ++ + +L
Sbjct: 1387 TKPLRRNDLINAINKL 1402
>gi|443242509|ref|YP_007375734.1| sensor protein [Nonlabens dokdonensis DSW-6]
gi|442799908|gb|AGC75713.1| sensor protein [Nonlabens dokdonensis DSW-6]
Length = 782
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 47/116 (40%), Positives = 71/116 (61%), Gaps = 6/116 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D+ + + I IL+S F EVA NG EAV+ +T AK+ ++ +D+ MP+MDG EA
Sbjct: 664 LVVEDNKINQMITRKILESKNFSCEVANNGLEAVEAVKT-AKYDLILMDIHMPIMDGKEA 722
Query: 90 TKAMRAMKVESKIVGVTSRN-SETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
TK +R+ E I+ +T+ SE+E++ F + G D KP KI E++QK
Sbjct: 723 TKKIRSFDPEIPIIALTAVTLSESEKD-FYEIGFDDIIPKPF---KIEEFFEKIQK 774
>gi|34497036|ref|NP_901251.1| sensor/response hybrid [Chromobacterium violaceum ATCC 12472]
gi|34330322|gb|AAQ59257.2| probable sensor/response hybrid [Chromobacterium violaceum ATCC
12472]
Length = 664
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 46/136 (33%), Positives = 79/136 (58%), Gaps = 8/136 (5%)
Query: 11 SKKARISENPVSKNRPYFA---LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
S A++ P ++P + L+V+D+ + + + + +L+++G +VE+A NG+EA+ L
Sbjct: 390 SAAAKVEPAPDGHDQPRLSGRVLLVEDNLVNQELATAMLRNLGCEVELARNGEEALRLCE 449
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMK----VESKIVGVTSRNSETEREVFMQAGLD 123
G F + +D EMPVMDG +AT A+RA + IV +T+ ERE +QAG+D
Sbjct: 450 AGG-FDLALMDCEMPVMDGWQATGAIRARERPGGARLTIVALTANAGLGERERCLQAGMD 508
Query: 124 LCYTKPLTMAKIVPLL 139
+KP T ++ +L
Sbjct: 509 DYLSKPFTQNELGAVL 524
>gi|359446280|ref|ZP_09235975.1| hypothetical protein P20439_2310 [Pseudoalteromonas sp. BSi20439]
gi|358039883|dbj|GAA72224.1| hypothetical protein P20439_2310 [Pseudoalteromonas sp. BSi20439]
Length = 1573
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 76/125 (60%), Gaps = 7/125 (5%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK--FHIVFIDMEM 81
++P L+V+D+P+ +++ +++LK + +V VAENG++A+++ K F +V +D +M
Sbjct: 1447 DKPAEILLVEDNPINQQVSTLMLKKLSCEVTVAENGQQAIEILSAHEKGHFSLVLMDCQM 1506
Query: 82 PVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
PVMDG AT A+R KI+ +T+ E++++ + AG+D +KP+ + +
Sbjct: 1507 PVMDGYSATTAIRNNAAGEQHKAIKIIALTANAMESDKQRCIDAGMDDYLSKPIQLDVLK 1566
Query: 137 PLLEE 141
LE+
Sbjct: 1567 QKLEQ 1571
Score = 52.8 bits (125), Expect = 4e-05, Method: Composition-based stats.
Identities = 38/123 (30%), Positives = 61/123 (49%), Gaps = 7/123 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-----FHIVFIDMEMPVM 84
LVVDD+ R + S L G VE+A + K+A+++ K + I +DM+MP M
Sbjct: 1302 LVVDDNQTNRLVISEQLGHWGAHVELASDAKQALEMCENRIKNQQKVYDIAVLDMQMPDM 1361
Query: 85 DGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
DGIE K ++A +V +TS + + + AG + KP+T A ++ L +
Sbjct: 1362 DGIELCKILKADANYQPMPLVMMTSIAGMEDAQRYSDAGFQAYFPKPVTTADLISALSVI 1421
Query: 143 QKN 145
N
Sbjct: 1422 ANN 1424
>gi|262169261|ref|ZP_06036953.1| signal transduction histidine kinase [Vibrio cholerae RC27]
gi|262022074|gb|EEY40783.1| signal transduction histidine kinase [Vibrio cholerae RC27]
Length = 570
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 73/131 (55%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K + S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|255745823|ref|ZP_05419771.1| signal transduction histidine kinase [Vibrio cholera CIRS 101]
gi|262153458|ref|ZP_06028589.1| signal transduction histidine kinase [Vibrio cholerae INDRE 91/1]
gi|360035340|ref|YP_004937103.1| sensor histidine kinase/response regulator [Vibrio cholerae O1 str.
2010EL-1786]
gi|417813458|ref|ZP_12460114.1| his Kinase A domain protein [Vibrio cholerae HC-49A2]
gi|417816322|ref|ZP_12462954.1| his Kinase A domain protein [Vibrio cholerae HCUF01]
gi|418337213|ref|ZP_12946111.1| his Kinase A domain protein [Vibrio cholerae HC-23A1]
gi|418344731|ref|ZP_12950513.1| his Kinase A domain protein [Vibrio cholerae HC-28A1]
gi|418348881|ref|ZP_12953615.1| his Kinase A domain protein [Vibrio cholerae HC-43A1]
gi|419825923|ref|ZP_14349427.1| his Kinase A domain protein [Vibrio cholerae CP1033(6)]
gi|421316436|ref|ZP_15767007.1| his Kinase A domain protein [Vibrio cholerae CP1032(5)]
gi|421325042|ref|ZP_15775568.1| his Kinase A domain protein [Vibrio cholerae CP1041(14)]
gi|421328702|ref|ZP_15779216.1| his Kinase A domain protein [Vibrio cholerae CP1042(15)]
gi|421331726|ref|ZP_15782206.1| his Kinase A domain protein [Vibrio cholerae CP1046(19)]
gi|422891554|ref|ZP_16933927.1| his Kinase A domain protein [Vibrio cholerae HC-40A1]
gi|422902761|ref|ZP_16937755.1| his Kinase A domain protein [Vibrio cholerae HC-48A1]
gi|422906644|ref|ZP_16941468.1| his Kinase A domain protein [Vibrio cholerae HC-70A1]
gi|422913223|ref|ZP_16947740.1| his Kinase A domain protein [Vibrio cholerae HFU-02]
gi|422925703|ref|ZP_16958726.1| his Kinase A domain protein [Vibrio cholerae HC-38A1]
gi|423145026|ref|ZP_17132633.1| his Kinase A domain protein [Vibrio cholerae HC-19A1]
gi|423149701|ref|ZP_17137029.1| his Kinase A domain protein [Vibrio cholerae HC-21A1]
gi|423153514|ref|ZP_17140708.1| his Kinase A domain protein [Vibrio cholerae HC-22A1]
gi|423156329|ref|ZP_17143433.1| his Kinase A domain protein [Vibrio cholerae HC-32A1]
gi|423731010|ref|ZP_17704322.1| his Kinase A domain protein [Vibrio cholerae HC-17A1]
gi|423892699|ref|ZP_17726379.1| his Kinase A domain protein [Vibrio cholerae HC-62A1]
gi|423927618|ref|ZP_17730997.1| his Kinase A domain protein [Vibrio cholerae HC-77A1]
gi|424002347|ref|ZP_17745431.1| his Kinase A domain protein [Vibrio cholerae HC-17A2]
gi|424006181|ref|ZP_17749159.1| his Kinase A domain protein [Vibrio cholerae HC-37A1]
gi|424024199|ref|ZP_17763857.1| his Kinase A domain protein [Vibrio cholerae HC-62B1]
gi|424027048|ref|ZP_17766659.1| his Kinase A domain protein [Vibrio cholerae HC-69A1]
gi|424586323|ref|ZP_18025910.1| his Kinase A domain protein [Vibrio cholerae CP1030(3)]
gi|424595025|ref|ZP_18034357.1| his Kinase A domain protein [Vibrio cholerae CP1040(13)]
gi|424598893|ref|ZP_18038082.1| his Kinase A domain protein [Vibrio Cholerae CP1044(17)]
gi|424606621|ref|ZP_18045579.1| his Kinase A domain protein [Vibrio cholerae CP1050(23)]
gi|424617247|ref|ZP_18055931.1| his Kinase A domain protein [Vibrio cholerae HC-42A1]
gi|424652716|ref|ZP_18090150.1| his Kinase A domain protein [Vibrio cholerae HC-57A2]
gi|440709697|ref|ZP_20890354.1| signal transduction histidine kinase [Vibrio cholerae 4260B]
gi|443503533|ref|ZP_21070509.1| his Kinase A domain protein [Vibrio cholerae HC-64A1]
gi|443507432|ref|ZP_21074214.1| his Kinase A domain protein [Vibrio cholerae HC-65A1]
gi|443511562|ref|ZP_21078214.1| his Kinase A domain protein [Vibrio cholerae HC-67A1]
gi|443515117|ref|ZP_21081641.1| his Kinase A domain protein [Vibrio cholerae HC-68A1]
gi|443518910|ref|ZP_21085319.1| his Kinase A domain protein [Vibrio cholerae HC-71A1]
gi|443523805|ref|ZP_21090028.1| his Kinase A domain protein [Vibrio cholerae HC-72A2]
gi|443538753|ref|ZP_21104608.1| his Kinase A domain protein [Vibrio cholerae HC-81A1]
gi|449056073|ref|ZP_21734741.1| Signal transduction histidine kinase [Vibrio cholerae O1 str. Inaba
G4222]
gi|255736898|gb|EET92295.1| signal transduction histidine kinase [Vibrio cholera CIRS 101]
gi|262030759|gb|EEY49392.1| signal transduction histidine kinase [Vibrio cholerae INDRE 91/1]
gi|340041044|gb|EGR02013.1| his Kinase A domain protein [Vibrio cholerae HC-49A2]
gi|340042048|gb|EGR03014.1| his Kinase A domain protein [Vibrio cholerae HCUF01]
gi|341623146|gb|EGS48712.1| his Kinase A domain protein [Vibrio cholerae HC-70A1]
gi|341623183|gb|EGS48748.1| his Kinase A domain protein [Vibrio cholerae HC-48A1]
gi|341624209|gb|EGS49717.1| his Kinase A domain protein [Vibrio cholerae HC-40A1]
gi|341639295|gb|EGS63916.1| his Kinase A domain protein [Vibrio cholerae HFU-02]
gi|341647141|gb|EGS71231.1| his Kinase A domain protein [Vibrio cholerae HC-38A1]
gi|356419366|gb|EHH72914.1| his Kinase A domain protein [Vibrio cholerae HC-21A1]
gi|356424428|gb|EHH77834.1| his Kinase A domain protein [Vibrio cholerae HC-19A1]
gi|356430615|gb|EHH83821.1| his Kinase A domain protein [Vibrio cholerae HC-22A1]
gi|356432791|gb|EHH85988.1| his Kinase A domain protein [Vibrio cholerae HC-23A1]
gi|356435929|gb|EHH89065.1| his Kinase A domain protein [Vibrio cholerae HC-28A1]
gi|356441729|gb|EHH94617.1| his Kinase A domain protein [Vibrio cholerae HC-32A1]
gi|356447620|gb|EHI00411.1| his Kinase A domain protein [Vibrio cholerae HC-43A1]
gi|356646494|gb|AET26549.1| sensor histidine kinase/response regulator [Vibrio cholerae O1 str.
2010EL-1786]
gi|395920712|gb|EJH31534.1| his Kinase A domain protein [Vibrio cholerae CP1041(14)]
gi|395921393|gb|EJH32213.1| his Kinase A domain protein [Vibrio cholerae CP1032(5)]
gi|395930208|gb|EJH40957.1| his Kinase A domain protein [Vibrio cholerae CP1042(15)]
gi|395932990|gb|EJH43733.1| his Kinase A domain protein [Vibrio cholerae CP1046(19)]
gi|395961148|gb|EJH71490.1| his Kinase A domain protein [Vibrio cholerae HC-57A2]
gi|395963999|gb|EJH74244.1| his Kinase A domain protein [Vibrio cholerae HC-42A1]
gi|395975055|gb|EJH84553.1| his Kinase A domain protein [Vibrio cholerae CP1030(3)]
gi|408033657|gb|EKG70189.1| his Kinase A domain protein [Vibrio cholerae CP1040(13)]
gi|408043205|gb|EKG79213.1| his Kinase A domain protein [Vibrio Cholerae CP1044(17)]
gi|408044486|gb|EKG80399.1| his Kinase A domain protein [Vibrio cholerae CP1050(23)]
gi|408610004|gb|EKK83380.1| his Kinase A domain protein [Vibrio cholerae CP1033(6)]
gi|408625152|gb|EKK98072.1| his Kinase A domain protein [Vibrio cholerae HC-17A1]
gi|408655775|gb|EKL26883.1| his Kinase A domain protein [Vibrio cholerae HC-77A1]
gi|408657261|gb|EKL28347.1| his Kinase A domain protein [Vibrio cholerae HC-62A1]
gi|408846748|gb|EKL86833.1| his Kinase A domain protein [Vibrio cholerae HC-37A1]
gi|408847073|gb|EKL87146.1| his Kinase A domain protein [Vibrio cholerae HC-17A2]
gi|408871210|gb|EKM10454.1| his Kinase A domain protein [Vibrio cholerae HC-62B1]
gi|408879734|gb|EKM18685.1| his Kinase A domain protein [Vibrio cholerae HC-69A1]
gi|439975286|gb|ELP51422.1| signal transduction histidine kinase [Vibrio cholerae 4260B]
gi|443432125|gb|ELS74659.1| his Kinase A domain protein [Vibrio cholerae HC-64A1]
gi|443435964|gb|ELS82089.1| his Kinase A domain protein [Vibrio cholerae HC-65A1]
gi|443439504|gb|ELS89205.1| his Kinase A domain protein [Vibrio cholerae HC-67A1]
gi|443443605|gb|ELS96894.1| his Kinase A domain protein [Vibrio cholerae HC-68A1]
gi|443447461|gb|ELT04104.1| his Kinase A domain protein [Vibrio cholerae HC-71A1]
gi|443450207|gb|ELT10488.1| his Kinase A domain protein [Vibrio cholerae HC-72A2]
gi|443466342|gb|ELT41001.1| his Kinase A domain protein [Vibrio cholerae HC-81A1]
gi|448264409|gb|EMB01647.1| Signal transduction histidine kinase [Vibrio cholerae O1 str. Inaba
G4222]
Length = 570
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 73/131 (55%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K + S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|149376372|ref|ZP_01894135.1| Signal transduction histidine kinase [Marinobacter algicola DG893]
gi|149359386|gb|EDM47847.1| Signal transduction histidine kinase [Marinobacter algicola DG893]
Length = 756
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 43/139 (30%), Positives = 80/139 (57%), Gaps = 3/139 (2%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
A G ++ +A+ P +R L+V+D+ + + + S +LK +G V +AENGK+A++
Sbjct: 608 ATGLDTADRAKTIATPAVVSRALNLLLVEDNQVNQVVASSMLKKLGHTVTLAENGKQALE 667
Query: 65 LFRTG-AKFHIVFIDMEMPVMDGIEATKAMRAMKV--ESKIVGVTSRNSETEREVFMQAG 121
+ G KF IV +D +MPVMDG EAT+ +R ++ VT+ + +R+ +++G
Sbjct: 668 ALQQGEGKFDIVLMDCQMPVMDGYEATRTIRENPEWRNLPVIAVTANVMQGDRDDCIESG 727
Query: 122 LDLCYTKPLTMAKIVPLLE 140
++ TKP A + +++
Sbjct: 728 MNDYITKPYNRADLKSIID 746
>gi|452842922|gb|EME44857.1| hypothetical protein DOTSEDRAFT_70797 [Dothistroma septosporum NZE10]
Length = 1239
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 86/148 (58%), Gaps = 11/148 (7%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
E ++S++ R +E P + AL+V+D+ + ++ ++K + K + A +GKEA D
Sbjct: 1086 GEAGNASEQKRNAEGPHGEQ---MALLVEDNDVNLKLLVALMKKLQLKYQCAAHGKEAYD 1142
Query: 65 LFRTGAK-FHIVFIDMEMPVMDGIEATKAMRAMKVE-----SKIVGVTS-RNSETEREVF 117
++R+ + ++ +D+ MPVMDG AT +RA++ + ++IV +T N E +R+ F
Sbjct: 1143 VYRSRPDGYFLILMDISMPVMDGFTATMKIRALENKQRLPRTRIVALTGVTNQEAKRQAF 1202
Query: 118 MQAGLDLCYTKPLTMAKIVPLLEELQKN 145
AG+D Y KP+ M ++ L+ Q++
Sbjct: 1203 -DAGVDEYYAKPVRMKELRELVNRTQQS 1229
>gi|449549637|gb|EMD40602.1| response regulator receiver [Ceriporiopsis subvermispora B]
Length = 1399
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 1/82 (1%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L+VDD+P+ + I S +K K +VA+NG+EAV +RTG +H++ +D++MPVMD
Sbjct: 987 PISVLIVDDNPINQTILSTFMKKKKIKYDVAKNGEEAVQKWRTG-NYHLILMDIQMPVMD 1045
Query: 86 GIEATKAMRAMKVESKIVGVTS 107
GI+ATK +R M+ + VG S
Sbjct: 1046 GIQATKEIRRMEKNNGAVGFPS 1067
>gi|399078165|ref|ZP_10752765.1| PAS domain S-box [Caulobacter sp. AP07]
gi|398034103|gb|EJL27380.1| PAS domain S-box [Caulobacter sp. AP07]
Length = 737
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 70/112 (62%), Gaps = 6/112 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D P +R+ +IL+S G ++ + NG+EAVD+F+ G +F +V +DM+MP+MDG+ A
Sbjct: 607 LLAEDHPTNQRVVQLILESTGVELTIVNNGQEAVDIFQPG-RFDLVLMDMQMPLMDGLAA 665
Query: 90 TKAMRAMK-----VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
T+A+RA + + I T+ + R + + AG + +KP+T +++
Sbjct: 666 TRAIRAREKALGCSPTPIAMFTANAMDEHRALAIAAGAEHHISKPITPERLL 717
>gi|393215387|gb|EJD00878.1| hypothetical protein FOMMEDRAFT_141652 [Fomitiporia mediterranea
MF3/22]
Length = 1217
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
Query: 4 GAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
G G +K + S+ + P L+V+D+P+ + I S ++ K +VA+NG EAV
Sbjct: 985 GTSGTPVPRKGKTSDGNIVP--PVNVLIVEDNPINQTILSTFMRKKKIKYDVAKNGAEAV 1042
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVT 106
++TG FH++ +D++MPVMDGIEATK +R ++E +++G T
Sbjct: 1043 AKWKTGG-FHLILMDIQMPVMDGIEATKEIR--RLERQVLGNT 1082
>gi|157963514|ref|YP_001503548.1| PAS/PAC sensor hybrid histidine kinase [Shewanella pealeana ATCC
700345]
gi|157848514|gb|ABV89013.1| PAS/PAC sensor hybrid histidine kinase [Shewanella pealeana ATCC
700345]
Length = 1234
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 28 FALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGI 87
+ L+V+D+ + +++ + +LKS G+ V+VAENG+ A+D+ AK+ V +D++MPVMDG+
Sbjct: 1111 YVLLVEDNFINQQVATELLKSAGYTVDVAENGQIALDML-DKAKYDAVLMDIQMPVMDGL 1169
Query: 88 EATKAMRAMKV--ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
ATK +R E ++ +T+ +RE + AG++ TKP+ + ++ L
Sbjct: 1170 TATKELRKRYPVDELPVIAMTAHAMSGDREKSLAAGMNAHITKPIVLTELFDTL 1223
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 41/75 (54%), Gaps = 3/75 (4%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGI 87
LV+DD+P +I+S +++ F V+ A +G E L++ ++ +D MP MDG+
Sbjct: 969 TLVIDDNPTALQIYSSVMRDFHFNVDTAASGPEG--LYKLSKNPVDLLLLDWMMPEMDGV 1026
Query: 88 EATKAMRAMKVESKI 102
E K + M + ++
Sbjct: 1027 EVIKQIDQMVADGRL 1041
>gi|451971858|ref|ZP_21925073.1| hypothetical protein C408_1685 [Vibrio alginolyticus E0666]
gi|451932216|gb|EMD79895.1| hypothetical protein C408_1685 [Vibrio alginolyticus E0666]
Length = 533
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Query: 11 SKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA 70
+ A SE V+ R L+V+D+ + +++ S++L G++ EVAENG+ AV++F+
Sbjct: 396 TSHAEQSEATVTPIRSERILLVEDNRVNQKVASLLLSKAGYQFEVAENGQVAVEMFQKDG 455
Query: 71 KFHIVFIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLC 125
F I+ +D MP+MDG EA++ +RA + ++ I+ +T+ + + + +G+D
Sbjct: 456 GFDIILMDCMMPIMDGFEASRQIRAYEASKGLPKTPIIALTASVVDDDIQRCFDSGMDAY 515
Query: 126 YTKPLTMAKIVPLLE 140
KP+ K++ +E
Sbjct: 516 VPKPVRREKLLYQIE 530
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 66/117 (56%), Gaps = 8/117 (6%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P +K P LVVDD+ + ++I + + GF ++A NG+EAVD+F+ ++ ++ +D
Sbjct: 244 PNAKTLPKI-LVVDDNTVNQKIAGLHVTKAGFDFDIAVNGEEAVDMFQQN-QYSLILMDC 301
Query: 80 EMPVMDGIEATKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
MPVMDG EATK +R ++ + K I+ +T+ + + + G+D KP
Sbjct: 302 MMPVMDGFEATKMIRQIEAKEKRTIRIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 358
>gi|432815971|ref|ZP_20049755.1| sensor kinase RcsC [Escherichia coli KTE115]
gi|431364195|gb|ELG50739.1| sensor kinase RcsC [Escherichia coli KTE115]
Length = 949
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + +++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 800 LIEMESDDPANALPLTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGID 859
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 860 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 918
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 919 MDSCLSKPVTL 929
>gi|386285963|ref|ZP_10063167.1| putative sensor kinase/response regulator fusion protein [gamma
proteobacterium BDW918]
gi|385281006|gb|EIF44914.1| putative sensor kinase/response regulator fusion protein [gamma
proteobacterium BDW918]
Length = 945
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/108 (33%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+P ++ + +L S+G V NG++A++ F G +F V +D+EMP+MDG EA
Sbjct: 810 LIAEDNPTNAQVLTRMLSSLGIDVHHVGNGQQALNSFIRG-RFDFVIMDIEMPIMDGAEA 868
Query: 90 TKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R + E + I G+T+ + +R+ +++AG+DL KP+ +
Sbjct: 869 TRQIRLFESEEGRERTPIFGLTANTLDEQRDSYLRAGMDLHLVKPIRL 916
>gi|323492426|ref|ZP_08097574.1| sensor/response regulator hybrid [Vibrio brasiliensis LMG 20546]
gi|323313213|gb|EGA66329.1| sensor/response regulator hybrid [Vibrio brasiliensis LMG 20546]
Length = 569
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 71/130 (54%), Gaps = 7/130 (5%)
Query: 17 SENPVSK--NRPYFA----LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA 70
S+NPVS N F LVVDD M + I + +LK + ++A NG EA+ G
Sbjct: 438 SDNPVSVEINPKSFEDLSILVVDDIRMNQVIINQMLKKLSITPDIATNGVEAIKAVSAG- 496
Query: 71 KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+ IVF+D MP MDG EAT +R + + I+ +T+ + ERE +Q+G+D TKP
Sbjct: 497 HYDIVFMDCRMPEMDGFEATAYLREQQCKLPIIALTAGTTLEEREKCIQSGMDDILTKPY 556
Query: 131 TMAKIVPLLE 140
T + +LE
Sbjct: 557 TAKDLKLMLE 566
>gi|424658802|ref|ZP_18096053.1| his Kinase A domain protein [Vibrio cholerae HE-16]
gi|408053994|gb|EKG88988.1| his Kinase A domain protein [Vibrio cholerae HE-16]
Length = 572
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R V+ I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHVDIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|254286108|ref|ZP_04961068.1| sensor histidine kinase/response regulator [Vibrio cholerae
AM-19226]
gi|150423777|gb|EDN15718.1| sensor histidine kinase/response regulator [Vibrio cholerae
AM-19226]
Length = 572
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 73/131 (55%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K + S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIEIXIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|402573960|ref|YP_006623303.1| signal transduction histidine kinase [Desulfosporosinus meridiei
DSM 13257]
gi|402255157|gb|AFQ45432.1| signal transduction histidine kinase [Desulfosporosinus meridiei
DSM 13257]
Length = 906
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 68/107 (63%), Gaps = 4/107 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D +R+ ILK +G+ VE+A NG++AV++ T K+ ++ +D +MP+MDG EA
Sbjct: 790 LLVEDMLANQRLEMTILKKLGYTVELATNGQQAVEICNT-KKYDLILMDCQMPIMDGYEA 848
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
T +R V +K I+ +T+ E +RE + AG+D +KP++M
Sbjct: 849 TIQIRKKSVFNKNTTILAMTAYTMEGDREKCINAGMDDYISKPVSMG 895
Score = 40.0 bits (92), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 29/118 (24%), Positives = 59/118 (50%), Gaps = 5/118 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH---IVFIDMEMPVMDG 86
+++DD+ R I L VG V+ A++G E +++ R + + I+ +D MP M G
Sbjct: 642 MIIDDNDTNRMIFREYLGEVGCLVKSAKDGFEGIEILRELSSKNLPRIILVDYMMPGMSG 701
Query: 87 IE-ATKAMRAMKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
E K +R + K++ +TS + + ++ G C KP+ +++ L+ ++
Sbjct: 702 YEFGKKVLRDERYRDIKLILITSAAQKGDAKLAKTIGFAGCLLKPVRKKELIELISQI 759
>gi|254417113|ref|ZP_05030859.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
gi|196176091|gb|EDX71109.1| response regulator receiver domain protein [Coleofasciculus
chthonoplastes PCC 7420]
Length = 2454
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 68/121 (56%), Gaps = 3/121 (2%)
Query: 11 SKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA 70
S+ A I E P + + P L+VDD +R + SM G++VE + +G+EA D R+G
Sbjct: 2310 SEGAGIEEAPETPHEP-LVLIVDDSITVRELLSMTFAKAGYRVEQSRDGQEAWDKLRSGL 2368
Query: 71 KFHIVFIDMEMPVMDGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTK 128
IVF D+EMP MDG+E ++ + S+ I +TSR ++ R++ Q G +TK
Sbjct: 2369 PCDIVFCDIEMPRMDGLELLSRLQKDENLSQLPIAMLTSRGAKRHRQMAAQLGASGYFTK 2428
Query: 129 P 129
P
Sbjct: 2429 P 2429
>gi|408390504|gb|EKJ69899.1| hypothetical protein FPSE_09922 [Fusarium pseudograminearum CS3096]
Length = 1270
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 51/150 (34%), Positives = 77/150 (51%), Gaps = 19/150 (12%)
Query: 10 SSKKARISENPVSKNRPYFA--LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
+ K AR S+ P P A L+VDD+ + + +M +K GF E AENG+EAV+ F
Sbjct: 1119 NGKSARESQKPNKPEMPNKAHVLLVDDNKINLNLLTMFMKKCGFTYEEAENGEEAVETFT 1178
Query: 68 TGA------------KFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNS 110
+F V +D+ MPVM+GIEATK +R ++ + K + +T S
Sbjct: 1179 KSTIGKGEPRGPIKKRFDYVLMDISMPVMNGIEATKRIRMIEAKYKVPRTTVFALTGLAS 1238
Query: 111 ETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
R + AG+DL KP+ A++ +LE
Sbjct: 1239 ADARLDAISAGVDLFLPKPVKFAELKTMLE 1268
>gi|376297674|ref|YP_005168904.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio desulfuricans
ND132]
gi|323460236|gb|EGB16101.1| PAS/PAC sensor hybrid histidine kinase [Desulfovibrio desulfuricans
ND132]
Length = 1049
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 74/127 (58%), Gaps = 14/127 (11%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSV----GFKVEVAENGKEAVDLFRTGAKFHIVFIDME 80
RP L+ +D+ R++S+++K + G V ENG E ++ RT A F ++ +D++
Sbjct: 922 RPLSILLAEDE----RVNSLVMKRLLEKGGHTVVAVENGAEVLETLRT-ASFDVILMDIQ 976
Query: 81 MPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
MPVMDG+E +A+RA +V + IV VT+ +RE F++AG+D KP+ M K+
Sbjct: 977 MPVMDGVETARAIRAGRVGADLTDIPIVAVTAYAMVGDREKFLKAGMDGYVVKPIEMEKL 1036
Query: 136 VPLLEEL 142
L E+
Sbjct: 1037 EQALAEV 1043
>gi|410995138|gb|AFV96603.1| hypothetical protein B649_01445 [uncultured Sulfuricurvum sp.
RIFRC-1]
Length = 1136
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 72/116 (62%), Gaps = 6/116 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALV +D+ + +++ L+ +G ++ +A NG EA + + G F ++F+D++MPV+DGIE
Sbjct: 787 ALVAEDNIINQKLIRRTLEDLGLEITIASNGLEAFEKRKNG-NFDVIFMDIQMPVLDGIE 845
Query: 89 ATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
AT+ + + + I+ +T+ + +RE F+ AG+D TKPL ++I+ LL
Sbjct: 846 ATQEILDFEEDYAQHHIPIIALTANALKGDRERFLAAGMDEYTTKPLVRSEIISLL 901
>gi|15641456|ref|NP_231088.1| sensor histidine kinase/response regulator [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121588029|ref|ZP_01677780.1| sensor histidine kinase/response regulator [Vibrio cholerae
2740-80]
gi|153817899|ref|ZP_01970566.1| sensor histidine kinase/response regulator [Vibrio cholerae NCTC
8457]
gi|153822685|ref|ZP_01975352.1| sensor histidine kinase/response regulator [Vibrio cholerae B33]
gi|227081617|ref|YP_002810168.1| sensor histidine kinase/response regulator [Vibrio cholerae M66-2]
gi|229504980|ref|ZP_04394490.1| signal transduction histidine kinase [Vibrio cholerae BX 330286]
gi|229511351|ref|ZP_04400830.1| signal transduction histidine kinase [Vibrio cholerae B33]
gi|229518469|ref|ZP_04407913.1| signal transduction histidine kinase [Vibrio cholerae RC9]
gi|229607983|ref|YP_002878631.1| signal transduction histidine kinase [Vibrio cholerae MJ-1236]
gi|254848565|ref|ZP_05237915.1| sensor histidine kinase/response regulator [Vibrio cholerae MO10]
gi|298498476|ref|ZP_07008283.1| sensor histidine kinase/response regulator [Vibrio cholerae MAK
757]
gi|298499372|ref|ZP_07009178.1| sensor histidine kinase/response regulator [Vibrio cholerae MAK
757]
gi|379741240|ref|YP_005333209.1| signal transduction histidine kinase [Vibrio cholerae IEC224]
gi|418332472|ref|ZP_12943404.1| his Kinase A domain protein [Vibrio cholerae HC-06A1]
gi|418354975|ref|ZP_12957696.1| his Kinase A domain protein [Vibrio cholerae HC-61A1]
gi|421321047|ref|ZP_15771604.1| his Kinase A domain protein [Vibrio cholerae CP1038(11)]
gi|421335301|ref|ZP_15785767.1| his Kinase A domain protein [Vibrio cholerae CP1048(21)]
gi|421339191|ref|ZP_15789626.1| his Kinase A domain protein [Vibrio cholerae HC-20A2]
gi|421347377|ref|ZP_15797759.1| his Kinase A domain protein [Vibrio cholerae HC-46A1]
gi|423160153|ref|ZP_17147121.1| his Kinase A domain protein [Vibrio cholerae HC-33A2]
gi|423164879|ref|ZP_17151630.1| his Kinase A domain protein [Vibrio cholerae HC-48B2]
gi|424601623|ref|ZP_18040775.1| his Kinase A domain protein [Vibrio cholerae CP1047(20)]
gi|424610451|ref|ZP_18049302.1| his Kinase A domain protein [Vibrio cholerae HC-39A1]
gi|424613258|ref|ZP_18052059.1| his Kinase A domain protein [Vibrio cholerae HC-41A1]
gi|424622022|ref|ZP_18060543.1| his Kinase A domain protein [Vibrio cholerae HC-47A1]
gi|424644993|ref|ZP_18082741.1| his Kinase A domain protein [Vibrio cholerae HC-56A2]
gi|424656576|ref|ZP_18093874.1| his Kinase A domain protein [Vibrio cholerae HC-81A2]
gi|443531410|ref|ZP_21097425.1| his Kinase A domain protein [Vibrio cholerae HC-7A1]
gi|443535192|ref|ZP_21101081.1| his Kinase A domain protein [Vibrio cholerae HC-80A1]
gi|9655945|gb|AAF94602.1| sensor histidine kinase/response regulator [Vibrio cholerae O1
biovar El Tor str. N16961]
gi|121547724|gb|EAX57816.1| sensor histidine kinase/response regulator [Vibrio cholerae
2740-80]
gi|126511526|gb|EAZ74120.1| sensor histidine kinase/response regulator [Vibrio cholerae NCTC
8457]
gi|126519805|gb|EAZ77028.1| sensor histidine kinase/response regulator [Vibrio cholerae B33]
gi|227009505|gb|ACP05717.1| sensor histidine kinase/response regulator [Vibrio cholerae M66-2]
gi|229345184|gb|EEO10158.1| signal transduction histidine kinase [Vibrio cholerae RC9]
gi|229351316|gb|EEO16257.1| signal transduction histidine kinase [Vibrio cholerae B33]
gi|229357203|gb|EEO22120.1| signal transduction histidine kinase [Vibrio cholerae BX 330286]
gi|229370638|gb|ACQ61061.1| signal transduction histidine kinase [Vibrio cholerae MJ-1236]
gi|254844270|gb|EET22684.1| sensor histidine kinase/response regulator [Vibrio cholerae MO10]
gi|297541353|gb|EFH77404.1| sensor histidine kinase/response regulator [Vibrio cholerae MAK
757]
gi|297542809|gb|EFH78859.1| sensor histidine kinase/response regulator [Vibrio cholerae MAK
757]
gi|356419031|gb|EHH72601.1| his Kinase A domain protein [Vibrio cholerae HC-06A1]
gi|356448484|gb|EHI01254.1| his Kinase A domain protein [Vibrio cholerae HC-33A2]
gi|356453377|gb|EHI06040.1| his Kinase A domain protein [Vibrio cholerae HC-61A1]
gi|356454260|gb|EHI06912.1| his Kinase A domain protein [Vibrio cholerae HC-48B2]
gi|378794750|gb|AFC58221.1| signal transduction histidine kinase [Vibrio cholerae IEC224]
gi|395924029|gb|EJH34840.1| his Kinase A domain protein [Vibrio cholerae CP1038(11)]
gi|395936255|gb|EJH46983.1| his Kinase A domain protein [Vibrio cholerae CP1048(21)]
gi|395944139|gb|EJH54813.1| his Kinase A domain protein [Vibrio cholerae HC-20A2]
gi|395946437|gb|EJH57101.1| his Kinase A domain protein [Vibrio cholerae HC-46A1]
gi|395960065|gb|EJH70456.1| his Kinase A domain protein [Vibrio cholerae HC-56A2]
gi|395971892|gb|EJH81521.1| his Kinase A domain protein [Vibrio cholerae HC-47A1]
gi|395977172|gb|EJH86594.1| his Kinase A domain protein [Vibrio cholerae CP1047(20)]
gi|408008119|gb|EKG46136.1| his Kinase A domain protein [Vibrio cholerae HC-39A1]
gi|408014252|gb|EKG51911.1| his Kinase A domain protein [Vibrio cholerae HC-41A1]
gi|408055179|gb|EKG90119.1| his Kinase A domain protein [Vibrio cholerae HC-81A2]
gi|443458493|gb|ELT25889.1| his Kinase A domain protein [Vibrio cholerae HC-7A1]
gi|443461655|gb|ELT32717.1| his Kinase A domain protein [Vibrio cholerae HC-80A1]
Length = 572
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 73/131 (55%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K + S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|372487603|ref|YP_005027168.1| PAS domain S-box [Dechlorosoma suillum PS]
gi|359354156|gb|AEV25327.1| PAS domain S-box [Dechlorosoma suillum PS]
Length = 1430
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 74/115 (64%), Gaps = 3/115 (2%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E +++ R L+ +D+P+ + + +L+ VG V++AENGKEA++L R G + ++ +
Sbjct: 1067 ERSLARYRNQRILLAEDNPLNQEVALELLRHVGLAVDLAENGKEALELAR-GKAYALILM 1125
Query: 78 DMEMPVMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
D++MPVMDG+EA++ +RA+ + I+ +T+ +R++ + AG++ KP+
Sbjct: 1126 DIQMPVMDGLEASRQIRALPGYAGTPILAMTANAFSEDRDLCIAAGMNDHVAKPV 1180
Score = 40.0 bits (92), Expect = 0.33, Method: Composition-based stats.
Identities = 33/128 (25%), Positives = 56/128 (43%), Gaps = 5/128 (3%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGK----EAVDLFRTGAKFH 73
E P R AL VDD R + L ++G +V+ A +G+ + R G +
Sbjct: 922 ELPPCLPRNLRALAVDDSEDARESLAHTLAALGTRVDTAASGEAALDAVLAADRLGDPYQ 981
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESKIVG-VTSRNSETEREVFMQAGLDLCYTKPLTM 132
+V +D MP DG+E + +R + + + + S + +AG KP+T
Sbjct: 982 LVLLDWLMPPPDGLETGRCIRTLPLNVQPQQLLVSAAKDIPATALSEAGFAAFIAKPVTP 1041
Query: 133 AKIVPLLE 140
A ++ LE
Sbjct: 1042 ASVLVALE 1049
>gi|116208764|ref|XP_001230191.1| hypothetical protein CHGG_03675 [Chaetomium globosum CBS 148.51]
gi|88184272|gb|EAQ91740.1| hypothetical protein CHGG_03675 [Chaetomium globosum CBS 148.51]
Length = 1193
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/138 (30%), Positives = 77/138 (55%), Gaps = 11/138 (7%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT-----GAK 71
+ P + P+ L+VDD+P+ ++ + +++ + A NG EAV L++ +
Sbjct: 1053 ASQPQPTSGPHL-LLVDDNPINLKLLTQLVRKLKHTFATANNGLEAVQLYKKSLEGQANR 1111
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCY 126
F ++F+D+ MPVM+G EAT+ +R +++ KIV +T S+ +GLDL
Sbjct: 1112 FDLIFMDISMPVMNGFEATREIRQLELAVGVGRCKIVALTGLRSDVNGAEATASGLDLFL 1171
Query: 127 TKPLTMAKIVPLLEELQK 144
TKP+ + I LL+E+++
Sbjct: 1172 TKPVKLNTIRQLLDEIRE 1189
>gi|386284471|ref|ZP_10061693.1| integral membrane sensor hybrid histidine kinase [Sulfurovum sp.
AR]
gi|385344756|gb|EIF51470.1| integral membrane sensor hybrid histidine kinase [Sulfurovum sp.
AR]
Length = 624
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 80/144 (55%), Gaps = 10/144 (6%)
Query: 7 GASSSKKARISENPVSKNRPYF----ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
AS KK +I + ++ F ALV DD+ + ++ +IL+++G +V V +GKEA
Sbjct: 478 NASEHKKEKILTSDTVEDTEQFQGLHALVADDNQINCKLIKIILENLGLEVTVVNDGKEA 537
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVF 117
V + T + I+F+D+EMP+MDG+EA K + + E I+ +T+ S ++E +
Sbjct: 538 VAM-STKNVYDIIFMDIEMPIMDGVEACKHIVEHETEHHLKHVPIIALTANTSSGDKEKY 596
Query: 118 MQAGLDLCYTKPLTMAKIVPLLEE 141
M G+D KPL + + ++ E
Sbjct: 597 MSKGMDDYAVKPLDIEALKMIISE 620
>gi|85059559|ref|YP_455261.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Sodalis glossinidius str. 'morsitans']
gi|84780079|dbj|BAE74856.1| capsular synthesis sensor protein RcsC [Sodalis glossinidius str.
'morsitans']
Length = 958
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N LVVDD P+ RR+ + L S+G++V A +G +A+++ A I+ D+ MP
Sbjct: 824 NEDILILVVDDHPINRRLLADQLGSLGYQVITANDGLDALNVISRQA-VDIILSDVNMPN 882
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
MDG + A+R + ++GVT+ E++ + AG+D C +KP+T+ + P+L
Sbjct: 883 MDGYQFAHALRTQGRLTPVIGVTANALAEEKQRCLDAGMDNCLSKPVTLEVLQPVL 938
>gi|256829874|ref|YP_003158602.1| PAS/PAC sensor hybrid histidine kinase [Desulfomicrobium baculatum
DSM 4028]
gi|256579050|gb|ACU90186.1| PAS/PAC sensor hybrid histidine kinase [Desulfomicrobium baculatum
DSM 4028]
Length = 678
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 6/132 (4%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+ E P+ + R LVV+DDP+ + + +L+ +G +A NG+EA+DL F V
Sbjct: 546 LEEPPLPEVRDKHVLVVEDDPVNQLALTRMLRKLGHYSTLARNGQEALDLLAL-EDFDCV 604
Query: 76 FIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+D++MP+MDG+EAT +R+ + E ++ +T +RE FM G+ +KP+
Sbjct: 605 LMDIQMPIMDGLEATSRIRSGSIGRVSPEIPVIALTGHAMPGDREHFMACGMTAYLSKPV 664
Query: 131 TMAKIVPLLEEL 142
M + L+ +L
Sbjct: 665 DMNSLSRLIAQL 676
>gi|145300355|ref|YP_001143196.1| hybrid sensory histidine kinase BarA [Aeromonas salmonicida subsp.
salmonicida A449]
gi|142853127|gb|ABO91448.1| two-component system hybrid sensor histidine kinase/response
regulator [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 903
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 71/115 (61%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L VDD+ ++ + +LK + +V V +NGKEAV L ++ F I+F+D++MP+MDGI A
Sbjct: 668 LAVDDNAANLKLIAAMLKEMVSQVVVCKNGKEAVRLAQS-QPFDIIFMDIQMPIMDGISA 726
Query: 90 TKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+A+R ++ E+ IV VT+ ERE ++ G+D KP+ + + L+ +
Sbjct: 727 TQAIRSQSLNTETPIVAVTAHAIPGERERLIRQGMDDYLAKPIDESMLAQLITDF 781
>gi|254226277|ref|ZP_04919869.1| sensor histidine kinase/response regulator [Vibrio cholerae V51]
gi|125621191|gb|EAZ49533.1| sensor histidine kinase/response regulator [Vibrio cholerae V51]
Length = 572
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 37/131 (28%), Positives = 73/131 (55%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K + S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KPSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R +E I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|320104791|ref|YP_004180382.1| multi-sensor hybrid histidine kinase [Isosphaera pallida ATCC
43644]
gi|319752073|gb|ADV63833.1| multi-sensor hybrid histidine kinase [Isosphaera pallida ATCC
43644]
Length = 973
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 63/115 (54%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D P IR++ L+ +G VE ENG+ AV+ G F ++ +D++MP+ DG EA
Sbjct: 650 LLAEDTPEIRQVILFHLRRLGLTVEAVENGELAVEKALAGPPFDLILMDLQMPITDGYEA 709
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
T +RA E IV +T+ ERE ++AG KP+ + + + L+ K
Sbjct: 710 TARLRASGFEGPIVALTAHTMTGERERCLRAGFTDHLGKPIDLNEFLTLMNRYLK 764
>gi|171057603|ref|YP_001789952.1| Hpt sensor hybrid histidine kinase [Leptothrix cholodnii SP-6]
gi|170775048|gb|ACB33187.1| Hpt sensor hybrid histidine kinase [Leptothrix cholodnii SP-6]
Length = 822
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 66/117 (56%), Gaps = 4/117 (3%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P LV DD P+ R+ +L+ +G +V + ENG EA++ F ++ +D+ MPVMD
Sbjct: 534 PLRVLVTDDHPVNRKFMQALLQQLGHQVHLRENGAEALEALHEHT-FDLILMDVHMPVMD 592
Query: 86 GIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G+ AT+A+RA+ + KIV +T+ R+ + AG+D KP+ M + +L
Sbjct: 593 GLAATRAIRALDGAAAQVKIVALTADAFSESRQRVIDAGMDDFLAKPVQMQDVEEML 649
>gi|423953553|ref|ZP_17734561.1| his Kinase A domain protein [Vibrio cholerae HE-40]
gi|423983000|ref|ZP_17738112.1| his Kinase A domain protein [Vibrio cholerae HE-46]
gi|408659376|gb|EKL30426.1| his Kinase A domain protein [Vibrio cholerae HE-40]
gi|408664931|gb|EKL35752.1| his Kinase A domain protein [Vibrio cholerae HE-46]
Length = 570
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 67/113 (59%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D + + ++L +G+ V +AENG +AV+L F +V +D+ MP+MDGI A
Sbjct: 455 LVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAA 514
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TK +R +E I+ +T+ + ++++ + AG++ KP+ I+ +++
Sbjct: 515 TKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRF 567
>gi|436684740|ref|ZP_20517890.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
gi|435004726|gb|ELL95676.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. SE30663]
Length = 415
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 64/103 (62%), Gaps = 1/103 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV D+ MP MDG
Sbjct: 295 LVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVLSDVNMPNMDGYRL 353
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 354 TQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 396
>gi|384501284|gb|EIE91775.1| hypothetical protein RO3G_16486 [Rhizopus delemar RA 99-880]
Length = 2269
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 46/137 (33%), Positives = 75/137 (54%), Gaps = 14/137 (10%)
Query: 8 ASSSKKARISENPV--SKNRPYFA----LVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
AS++ A+ +P+ K R ++ L+ +D+P+ +++ L +GF VE A NG E
Sbjct: 2116 ASTTSSAKTKPDPLITDKERGLYSQMNILIAEDNPVAQKLLFKQLTRLGFHVECANNGLE 2175
Query: 62 AVDLF--RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES------KIVGVTSRNSETE 113
AVD + R F + F D MP DG+ ATK +R ++ E IV +T+ E+
Sbjct: 2176 AVDAWINRPTGYFSMAFFDHHMPKCDGVAATKRIREIEREEGKDVRLPIVALTADVQESA 2235
Query: 114 REVFMQAGLDLCYTKPL 130
R++ ++AG+D TKPL
Sbjct: 2236 RQICIKAGMDGYLTKPL 2252
>gi|417303692|ref|ZP_12090740.1| sensor signal transduction multi-kinase [Rhodopirellula baltica WH47]
gi|327540026|gb|EGF26622.1| sensor signal transduction multi-kinase [Rhodopirellula baltica WH47]
Length = 1976
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/114 (41%), Positives = 69/114 (60%), Gaps = 3/114 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF-HIVFIDMEMPVMDGIE 88
LVVDD RR+ S++L+ G +V++ NG+EAVD R+ IV +DM+MPVMDG
Sbjct: 1674 LVVDDCETNRRLLSLLLQDAGAEVDIRCNGREAVDALRSDPSMVDIVLMDMQMPVMDGYT 1733
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREV-FMQAGLDLCYTKPLTMAKIVPLLEE 141
AT A+RA ++ IV +T+ N+ T EV +AG TKPL + ++ + E
Sbjct: 1734 ATSALRAHGFQAPIVALTA-NAMTGDEVRCREAGCTDYQTKPLDLNALLQCVAE 1786
>gi|304311698|ref|YP_003811296.1| hypothetical protein HDN1F_20680 [gamma proteobacterium HdN1]
gi|301797431|emb|CBL45651.1| Hypothetical protein HDN1F_20680 [gamma proteobacterium HdN1]
Length = 967
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 43/129 (33%), Positives = 70/129 (54%), Gaps = 7/129 (5%)
Query: 19 NPVSKNRPY------FALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF 72
N SKN P L+ +D+P+ +++ I++ G KV +A NG EA+ + F
Sbjct: 817 NASSKNSPENSLLQGHVLLAEDNPVNQKLVRRIIEKTGAKVTIANNGVEALQHAES-KNF 875
Query: 73 HIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
+V +D+ MP+MDGIEATK +RA + I +T+ + E + +AG + KPL +
Sbjct: 876 ELVLMDINMPMMDGIEATKRLRAAGYQGSIFALTAESGSEEIRLCKEAGCNGYLQKPLEL 935
Query: 133 AKIVPLLEE 141
AK +L +
Sbjct: 936 AKFNQVLRK 944
>gi|342890338|gb|EGU89165.1| hypothetical protein FOXB_00320 [Fusarium oxysporum Fo5176]
Length = 1203
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 73/120 (60%), Gaps = 12/120 (10%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGIE 88
L+VDD+P+ ++ M +K + + A +G++AV ++ K + VF+D+ MPVM+G E
Sbjct: 1082 LLVDDNPINLKMLIMFMKKLNLQYSTATDGQQAVAKYKESPKSYKCVFMDISMPVMNGFE 1141
Query: 89 ATKAMRAMKVESKI--------VGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
AT+A+RA++ + I G+ SR++ ++E F+ +G+DL TKP+ + I LE
Sbjct: 1142 ATRAIRAIEADGAITKCPIFALTGLASRDA--QQEAFL-SGIDLFLTKPIQLTDIKHFLE 1198
>gi|256829422|ref|YP_003158150.1| PAS/PAC sensor hybrid histidine kinase [Desulfomicrobium baculatum
DSM 4028]
gi|256578598|gb|ACU89734.1| PAS/PAC sensor hybrid histidine kinase [Desulfomicrobium baculatum
DSM 4028]
Length = 1131
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 8/136 (5%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
A GA++ +A + E P S +RP L+ +DD + +L G++V VA G EAV
Sbjct: 984 APGATTVPEA-LGEVP-SPSRPVRILLAEDDEVTIFATRALLTRAGYEVSVARTGHEAVS 1041
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRA-----MKVESKIVGVTSRNSETEREVFMQ 119
L R F +V +D++MP MDG+EAT+ +R+ K I+ +T+ + E+E+F+
Sbjct: 1042 LLRE-QDFGLVLMDVQMPGMDGVEATRIIRSDPGLGDKRSIPIIALTAFAMDGEKEIFLA 1100
Query: 120 AGLDLCYTKPLTMAKI 135
AG+D KP+ M +
Sbjct: 1101 AGMDGYVAKPVGMKDL 1116
>gi|407072090|ref|ZP_11102928.1| Signal transduction histidine kinase [Vibrio cyclitrophicus ZF14]
Length = 574
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA-KFHIVFIDMEMPVMD 85
Y LVV+D+P + + +IL G +V +A NG+EA+ G I+ +D+ MPVMD
Sbjct: 454 YSVLVVEDNPTNQMVIKLILTRQGHEVFIASNGEEAIGFVERGNDSIDIILMDVSMPVMD 513
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
G+ TK MR +++ IV +T+ S ++ + AG++ TKP+ +I ++ L
Sbjct: 514 GLTTTKCMRDANIQTPIVALTAHTSIEDKYSCLDAGMNDFVTKPVRTKEITEAIDRL 570
>gi|302786022|ref|XP_002974782.1| hypothetical protein SELMODRAFT_451443 [Selaginella moellendorffii]
gi|300157677|gb|EFJ24302.1| hypothetical protein SELMODRAFT_451443 [Selaginella moellendorffii]
Length = 823
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
+SS +++ + ++ P LVV+D+ + + + +L ++G V+VA NG+EAV +
Sbjct: 684 ASSNRSKAGDKAQTRRHPK-VLVVEDNKVNQMVAIRLLNNLGCTVDVACNGQEAVSIVDK 742
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTK 128
++ ++F+D MPV+DG +A++ +R+ + + IV +T+ E+E E ++ G+D K
Sbjct: 743 PVEYDLIFMDCHMPVLDGFQASRLIRSKQKLTPIVALTAATMESELEKCLECGMDDYVRK 802
Query: 129 PLTMAKIVPLLEE 141
P T ++ +L +
Sbjct: 803 PCTKQELQRVLHK 815
>gi|196228199|ref|ZP_03127066.1| multi-sensor hybrid histidine kinase [Chthoniobacter flavus Ellin428]
gi|196227602|gb|EDY22105.1| multi-sensor hybrid histidine kinase [Chthoniobacter flavus Ellin428]
Length = 1248
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 77/126 (61%), Gaps = 7/126 (5%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
A S + A + P+ K R L+ +D+P+ +++ L+ +G+ +V ENG+ A+D
Sbjct: 981 ALSEQPASLPSEPIEKLR---ILIAEDNPVNQKVALYQLQKLGYMADVVENGRRALDAL- 1036
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVE---SKIVGVTSRNSETEREVFMQAGLDL 124
+++ IVF+D +MP +DG EAT+ +RA++ + + ++ +T+ + E +RE + AG+D
Sbjct: 1037 ARSRYDIVFMDCQMPELDGYEATRDLRAIEGDVRHTWVIAMTANSLEGDREKCLNAGMDD 1096
Query: 125 CYTKPL 130
+KP+
Sbjct: 1097 YVSKPV 1102
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 63/116 (54%), Gaps = 6/116 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT----GAKFHIVFIDMEMPVMD 85
+ VDD+ R I +L + G + + A +GK+A+ + + G F + +DM+MP MD
Sbjct: 847 ITVDDNDTNRAILHHLLSNWGMREQQAASGKQALSILQAEAGRGRMFDLAILDMQMPEMD 906
Query: 86 GIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G+E +AM+ ++IV +TS + + + E + G+D TKP+ +++ L
Sbjct: 907 GLELARAMKKDPRFASARIVMLTSVDRQEDPEALRETGVDAYLTKPVKQSQLYDCL 962
>gi|71906576|ref|YP_284163.1| response regulator receiver:ATP-binding region,
ATPase-like:histidine kinase A, N-terminal:Hpt
[Dechloromonas aromatica RCB]
gi|71846197|gb|AAZ45693.1| Response regulator receiver:ATP-binding region,
ATPase-like:Histidine kinase A, N-terminal:Hpt
[Dechloromonas aromatica RCB]
Length = 852
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/122 (33%), Positives = 73/122 (59%), Gaps = 12/122 (9%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+P+ + + + +L+ +V +A NG EAVDLF +G F ++ +DM+MPVM GIEA
Sbjct: 593 LLVEDNPVNQELATRLLERQSHRVSLANNGAEAVDLFDSG-HFDVILMDMQMPVMGGIEA 651
Query: 90 TKAMRAMKVESK-----------IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
T+A+R+ ++ I+ +T+ T+R+ ++AG++ KPL ++
Sbjct: 652 TEAIRSREMRRSWVVSHELKPVYIIAMTANVMATDRDRCLEAGMNDYVAKPLRSEELYAA 711
Query: 139 LE 140
LE
Sbjct: 712 LE 713
>gi|374608920|ref|ZP_09681717.1| two component transcriptional regulator, winged helix family
[Mycobacterium tusciae JS617]
gi|373552660|gb|EHP79263.1| two component transcriptional regulator, winged helix family
[Mycobacterium tusciae JS617]
Length = 238
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 18/141 (12%)
Query: 4 GAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
GAEGAS + L+VDDDP +R + L+ GF V VA NGKEA+
Sbjct: 7 GAEGASRT-----------------VLMVDDDPDVRTSVARGLRHSGFDVRVAANGKEAL 49
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLD 123
L + +V +D++MP +DG+ A+RA+ E I +++R++ +R ++AG D
Sbjct: 50 RLLSNESHDALV-LDVQMPELDGVAVVTALRALGNEIPICVLSARDTVNDRIAGLEAGAD 108
Query: 124 LCYTKPLTMAKIVPLLEELQK 144
TKP + ++V L L +
Sbjct: 109 DYLTKPFDLGELVARLHALLR 129
>gi|119469670|ref|ZP_01612539.1| putative sensor protein [Alteromonadales bacterium TW-7]
gi|119446917|gb|EAW28188.1| putative sensor protein [Alteromonadales bacterium TW-7]
Length = 1118
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/132 (30%), Positives = 75/132 (56%), Gaps = 7/132 (5%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF--RTGAKFH 73
+++ P+ + L+V+D+ + + + S +LK G ++AENG+EA+ + +
Sbjct: 982 LTKAPIKDSSEPVLLLVEDNKINQVVASALLKEAGVIFDIAENGEEAISKLNAKQNNPYK 1041
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTK 128
++ +D +MP+MDG +AT+A+R K I+ +T+ + +RE + AG+D TK
Sbjct: 1042 LILMDCQMPIMDGYQATQAIRQGGAGEKYNAVSIIALTANAMQGDREKCIAAGMDDYLTK 1101
Query: 129 PLTMAKIVPLLE 140
PL MA + P L+
Sbjct: 1102 PLDMAALKPKLQ 1113
>gi|313674944|ref|YP_004052940.1| multi-sensor hybrid histidine kinase [Marivirga tractuosa DSM 4126]
gi|312941642|gb|ADR20832.1| multi-sensor hybrid histidine kinase [Marivirga tractuosa DSM 4126]
Length = 1092
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 48/143 (33%), Positives = 85/143 (59%), Gaps = 10/143 (6%)
Query: 8 ASSSKKARISE----NPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
A S+K +S+ N S N P F L+VDD+ + R++ S IL GFK ++A +G A+
Sbjct: 820 AFKSQKQTVSKSQKLNFKSDNAP-FILIVDDNTINRQVASQILMKSGFKTDLAFSGPAAI 878
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAM-KVESKIVGVTSRNSETEREVFMQAGL 122
+ + + ++F+D++MPVMDG+ AT+ ++ + K IV +T+ + + +R+ F+ G+
Sbjct: 879 EKVKN-HDYDLIFMDIQMPVMDGVTATREIKKLPKKIPPIVAMTAYSMKEDRQRFLDLGM 937
Query: 123 DLCYTKPLTMAKIVPLLEELQKN 145
D KP+ + LLE +Q+N
Sbjct: 938 DDYLAKPIVSSL---LLEVIQQN 957
>gi|302760541|ref|XP_002963693.1| hypothetical protein SELMODRAFT_451444 [Selaginella moellendorffii]
gi|300168961|gb|EFJ35564.1| hypothetical protein SELMODRAFT_451444 [Selaginella moellendorffii]
Length = 825
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 38/133 (28%), Positives = 79/133 (59%), Gaps = 1/133 (0%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
+SS +++ + ++ P LVV+D+ + + + +L ++G V+VA NG+EAV +
Sbjct: 686 ASSNRSKAGDKAQTRRHPK-VLVVEDNKVNQMVAIRLLNNLGCTVDVACNGQEAVSIVDK 744
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTK 128
++ ++F+D MPV+DG +A++ +R+ + + IV +T+ E+E E ++ G+D K
Sbjct: 745 PVEYDLIFMDCHMPVLDGFQASRLIRSKQKLTPIVALTAATMESELEKCLECGMDDYVRK 804
Query: 129 PLTMAKIVPLLEE 141
P T ++ +L +
Sbjct: 805 PCTKQELQRVLHK 817
>gi|257059244|ref|YP_003137132.1| PAS/PAC sensor hybrid histidine kinase [Cyanothece sp. PCC 8802]
gi|256589410|gb|ACV00297.1| PAS/PAC sensor hybrid histidine kinase [Cyanothece sp. PCC 8802]
Length = 1611
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D RR+ +L SVGF+V+ A NG EAV + +T H++++D+ MPVMDG
Sbjct: 1410 YQILVVEDVDENRRLLVELLASVGFQVKEASNGLEAVAISQTWHP-HLIWMDIRMPVMDG 1468
Query: 87 IEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
EAT+ ++ + K I+ +T+ E +RE ++AG D +KP
Sbjct: 1469 YEATRRIKQAALSQKPVIIALTASVFEEQRETVLEAGCDDIVSKPF 1514
>gi|46117208|ref|XP_384622.1| hypothetical protein FG04446.1 [Gibberella zeae PH-1]
Length = 1191
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 77/150 (51%), Gaps = 19/150 (12%)
Query: 10 SSKKARISENPVSKNRPYFA--LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
+ K AR S+ P P A L+VDD+ + + +M +K GF E AENG+EAV+ F
Sbjct: 1040 NDKSARESQKPNKPEMPNKAHVLLVDDNKINLNLLTMFMKKCGFTYEEAENGEEAVETFT 1099
Query: 68 TGA------------KFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNS 110
+F V +D+ MPVM+G+EATK +R ++ + K + +T S
Sbjct: 1100 KSTIGKGEPRGPIKKRFDYVLMDISMPVMNGVEATKRIRKIEAKYKVPRTTVFALTGLAS 1159
Query: 111 ETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
R + AG+DL KP+ A++ +LE
Sbjct: 1160 ADARLDAISAGVDLFLPKPVKFAELKTMLE 1189
>gi|417820850|ref|ZP_12467464.1| his Kinase A domain protein [Vibrio cholerae HE39]
gi|340038481|gb|EGQ99455.1| his Kinase A domain protein [Vibrio cholerae HE39]
Length = 572
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 67/113 (59%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D + + ++L +G+ V +AENG +AV+L F +V +D+ MP+MDGI A
Sbjct: 457 LVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAA 516
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TK +R +E I+ +T+ + ++++ + AG++ KP+ I+ +++
Sbjct: 517 TKILRDKHIEIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKDIMEVVKRF 569
>gi|449304840|gb|EMD00847.1| hypothetical protein BAUCODRAFT_100388 [Baudoinia compniacensis
UAMH 10762]
Length = 655
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 83/156 (53%), Gaps = 19/156 (12%)
Query: 6 EGASSSKKARISENP------VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENG 59
E SK A E+P + N L+V+D+ + +RI + L++ GF V A+NG
Sbjct: 497 ESEKQSKAASPKESPNGHRVEPTANGRTRVLLVEDNVINQRIVNRKLQAKGFSVTTADNG 556
Query: 60 KEAVDLFRTGAK--------FHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVT 106
+ AVDL R G + F ++ +D EMPVMDG ATKA+R M+ + + I+GVT
Sbjct: 557 QVAVDLVRQGPRTSGGDDGLFDVILMDQEMPVMDGNAATKAIREMQNKGEIERLPILGVT 616
Query: 107 SRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
+ +++ + +G+D +KP + +V + ++
Sbjct: 617 ANVRGAQQDEMISSGMDDVISKPYKIEDMVAKINKI 652
>gi|345871625|ref|ZP_08823569.1| PAS/PAC sensor hybrid histidine kinase [Thiorhodococcus drewsii
AZ1]
gi|343920283|gb|EGV31019.1| PAS/PAC sensor hybrid histidine kinase [Thiorhodococcus drewsii
AZ1]
Length = 616
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 70/112 (62%), Gaps = 3/112 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +DDP+ + + +L G V+VA+NG+ A+DL R + +V +DM+MPVMDG++A
Sbjct: 489 LLAEDDPINQEVALFLLTDTGLSVDVADNGQRALDLARE-RDYALVLMDMQMPVMDGLDA 547
Query: 90 TKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+A+RA+ + I+ +T+ + +R+ + AG++ KP+ A++ L
Sbjct: 548 TRAIRALPGRESLPILAMTANAFDEDRQACLTAGMNDHIGKPVQPARLYAAL 599
>gi|262394408|ref|YP_003286262.1| hypothetical protein VEA_003637 [Vibrio sp. Ex25]
gi|262338002|gb|ACY51797.1| hypothetical protein VEA_003637 [Vibrio sp. Ex25]
Length = 1055
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E S ++++ + P+ R L+V+D+ + +++ S++L G++ EVAENG+ AV++
Sbjct: 916 EKTSHAEQSEATVTPIRSER---ILLVEDNRVNQKVASLLLSKAGYQFEVAENGQVAVEM 972
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQA 120
F+ F I+ +D MP+MDG EA++ +RA + ++ I+ +T+ + + + +
Sbjct: 973 FQKDGGFDIILMDCMMPIMDGFEASRQIRAYEASKGLPKTPIIALTASVVDDDIQRCFDS 1032
Query: 121 GLDLCYTKPLTMAKIVPLLE 140
G+D KP+ K++ +E
Sbjct: 1033 GMDAYVPKPVRREKLLYQIE 1052
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
+ P +K P LVVDD+ + ++I + + GF ++A NG+EAVD+F+ ++ ++
Sbjct: 763 TTTPNAKTLPKI-LVVDDNTVNQKIAGLHVTKAGFDFDIAVNGEEAVDMFQQN-QYCLIL 820
Query: 77 IDMEMPVMDGIEATKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+D MPVMDG EATK +R ++ + K I+ +T+ + + + G+D KP
Sbjct: 821 MDCMMPVMDGFEATKMIRQIEAKEKRTVKIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 880
>gi|409098115|ref|ZP_11218139.1| multi-sensor hybrid histidine kinase [Pedobacter agri PB92]
Length = 741
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 17 SENPVSKNRPYFA----LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF 72
SE P+ ++ F+ L+VDD+ M R + S IL G +V VA+ G A+D+ F
Sbjct: 474 SETPLIQDEELFSGRRVLIVDDNEMNRLVASTILLRYGPQVMVADTGMIALDMLNDEV-F 532
Query: 73 HIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
IV +D++MP +DG + T+A+R+ ++ +T+ E ERE + AG+D TKP+
Sbjct: 533 DIVLMDIQMPELDGYDTTRALRSRGYTGAVIALTASAIEGEREKCLAAGMDDYITKPI 590
>gi|312130024|ref|YP_003997364.1| multi-sensor hybrid histidine kinase [Leadbetterella byssophila DSM
17132]
gi|311906570|gb|ADQ17011.1| multi-sensor hybrid histidine kinase [Leadbetterella byssophila DSM
17132]
Length = 1076
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 4/118 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD+ + R++ ILK V A++G +A+D F+ F ++ +D++MP MDGIE
Sbjct: 825 LLVDDNAINRKVAMEILKKANCHVIGADSGMKALDTFQNNPDFDLILMDIQMPEMDGIET 884
Query: 90 TKAMRAMKVES---KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
TK +R K S K+V +T+ + E +RE F+ +G+D KP+ ++ +EE K
Sbjct: 885 TKILRE-KFGSKLPKVVAMTAYSMENDREKFLSSGMDNYLAKPIRANLLIQKVEECLK 941
>gi|345873782|ref|ZP_08825674.1| multi-sensor hybrid histidine kinase [Thiorhodococcus drewsii AZ1]
gi|343916870|gb|EGV27696.1| multi-sensor hybrid histidine kinase [Thiorhodococcus drewsii AZ1]
Length = 1100
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/108 (35%), Positives = 71/108 (65%), Gaps = 3/108 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +DDP+ + + +L+ + +VEV +G++AV RTG ++ +V +D++MPVMDG+ A
Sbjct: 875 LLAEDDPINQEVARELLRRLEIEVEVVNDGRQAVKRIRTG-EYALVLMDVQMPVMDGLAA 933
Query: 90 TKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
T+A+R + K E I+ +T+ + +R + AG++ TKP+T A++
Sbjct: 934 TRAIRRLHGKAELPILAMTASAFDEDRRKCLAAGMNDHITKPVTPAQL 981
>gi|419829992|ref|ZP_14353478.1| his Kinase A domain protein [Vibrio cholerae HC-1A2]
gi|419833569|ref|ZP_14357029.1| his Kinase A domain protein [Vibrio cholerae HC-61A2]
gi|422917400|ref|ZP_16951722.1| his Kinase A domain protein [Vibrio cholerae HC-02A1]
gi|423821388|ref|ZP_17716325.1| his Kinase A domain protein [Vibrio cholerae HC-55C2]
gi|423881915|ref|ZP_17723719.1| his Kinase A domain protein [Vibrio cholerae HC-60A1]
gi|423997811|ref|ZP_17741066.1| his Kinase A domain protein [Vibrio cholerae HC-02C1]
gi|424016704|ref|ZP_17756537.1| his Kinase A domain protein [Vibrio cholerae HC-55B2]
gi|424019632|ref|ZP_17759421.1| his Kinase A domain protein [Vibrio cholerae HC-59B1]
gi|424625004|ref|ZP_18063472.1| his Kinase A domain protein [Vibrio cholerae HC-50A1]
gi|424629497|ref|ZP_18067789.1| his Kinase A domain protein [Vibrio cholerae HC-51A1]
gi|424633537|ref|ZP_18071643.1| his Kinase A domain protein [Vibrio cholerae HC-52A1]
gi|424639252|ref|ZP_18077151.1| his Kinase A domain protein [Vibrio cholerae HC-56A1]
gi|424648601|ref|ZP_18086267.1| his Kinase A domain protein [Vibrio cholerae HC-57A1]
gi|443527500|ref|ZP_21093556.1| his Kinase A domain protein [Vibrio cholerae HC-78A1]
gi|341637755|gb|EGS62426.1| his Kinase A domain protein [Vibrio cholerae HC-02A1]
gi|408013564|gb|EKG51277.1| his Kinase A domain protein [Vibrio cholerae HC-50A1]
gi|408019075|gb|EKG56493.1| his Kinase A domain protein [Vibrio cholerae HC-52A1]
gi|408027511|gb|EKG64482.1| his Kinase A domain protein [Vibrio cholerae HC-56A1]
gi|408033794|gb|EKG70317.1| his Kinase A domain protein [Vibrio cholerae HC-57A1]
gi|408056389|gb|EKG91277.1| his Kinase A domain protein [Vibrio cholerae HC-51A1]
gi|408621577|gb|EKK94580.1| his Kinase A domain protein [Vibrio cholerae HC-1A2]
gi|408635340|gb|EKL07553.1| his Kinase A domain protein [Vibrio cholerae HC-55C2]
gi|408641812|gb|EKL13579.1| his Kinase A domain protein [Vibrio cholerae HC-60A1]
gi|408650172|gb|EKL21465.1| his Kinase A domain protein [Vibrio cholerae HC-61A2]
gi|408853118|gb|EKL92927.1| his Kinase A domain protein [Vibrio cholerae HC-02C1]
gi|408860441|gb|EKM00075.1| his Kinase A domain protein [Vibrio cholerae HC-55B2]
gi|408867934|gb|EKM07285.1| his Kinase A domain protein [Vibrio cholerae HC-59B1]
gi|443454154|gb|ELT17965.1| his Kinase A domain protein [Vibrio cholerae HC-78A1]
Length = 570
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R ++ I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHIDIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|302340600|ref|YP_003805806.1| multi-sensor hybrid histidine kinase [Spirochaeta smaragdinae DSM
11293]
gi|301637785|gb|ADK83212.1| multi-sensor hybrid histidine kinase [Spirochaeta smaragdinae DSM
11293]
Length = 802
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D + +++ IL+S G +V++A NGKEAV G ++ ++F+D++MP M+G EA
Sbjct: 558 LVAEDHEVNQQLFKTILESFGHEVDLASNGKEAVQATH-GRRYDLIFMDVQMPEMNGYEA 616
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
T A+R+ +++ IV VT+ E E G+ KP ++P+L+
Sbjct: 617 TSAIRSSGIDTPIVAVTASALRGEEERCRNVGMSGFLVKPFKKRDLIPVLD 667
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 35/69 (50%), Gaps = 7/69 (10%)
Query: 27 YFA---LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT----GAKFHIVFIDM 79
YF+ LVVDD P +R L G +E + NG A+D+ R+ G F + +D
Sbjct: 392 YFSAKVLVVDDTPSVREAVCAYLSEWGCSIECSSNGPAALDVLRSQAAEGNGFTLCIVDQ 451
Query: 80 EMPVMDGIE 88
MP MDG +
Sbjct: 452 MMPGMDGWQ 460
>gi|149276155|ref|ZP_01882299.1| two-component hybrid sensor and regulator [Pedobacter sp. BAL39]
gi|149232675|gb|EDM38050.1| two-component hybrid sensor and regulator [Pedobacter sp. BAL39]
Length = 633
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 37/129 (28%), Positives = 76/129 (58%), Gaps = 2/129 (1%)
Query: 13 KARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF 72
K + ++ P L+ +D+P+ ++ + IL +G++ +VA +G EA+++ ++
Sbjct: 491 KTSVFSAAFAEKNPLRILIAEDNPINIKLATTILLKLGYQADVAHDGHEALEMC-IAKRY 549
Query: 73 HIVFIDMEMPVMDGIEATKAMRAMKV-ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
+V +D+ MP MDG+EAT+ +R + + + I+ +T+ + +RE + AG+D +KPL
Sbjct: 550 DLVLMDVMMPEMDGLEATRQIRLLDIKQPTIIAMTANAMKEDREKCLNAGMDEYLSKPLN 609
Query: 132 MAKIVPLLE 140
M ++ LE
Sbjct: 610 MNLLMSTLE 618
>gi|397687581|ref|YP_006524900.1| sensor histidine kinase/response regulator GacS [Pseudomonas
stutzeri DSM 10701]
gi|395809137|gb|AFN78542.1| sensor histidine kinase/response regulator GacS [Pseudomonas
stutzeri DSM 10701]
Length = 917
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 44/132 (33%), Positives = 79/132 (59%), Gaps = 9/132 (6%)
Query: 13 KARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF 72
+A + + PVS +RP L VDD+P + +L +G +V +G++A+++ + + F
Sbjct: 654 QALVEQVPVSDSRPPSVLCVDDNPANLMLLETLLTDMGGEVVAVSSGQQALEVVQQQS-F 712
Query: 73 HIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYT 127
+VF+D++MP MDG + T+A+R ++ES IV +T+ ER +Q+GLD T
Sbjct: 713 DMVFMDVQMPGMDGRQTTEAIRRWELESGQPPLPIVALTAHALSNERRSLLQSGLDDYLT 772
Query: 128 KPLT---MAKIV 136
KP++ +A++V
Sbjct: 773 KPISERQLAQVV 784
>gi|389578387|ref|ZP_10168414.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfobacter postgatei 2ac9]
gi|389400022|gb|EIM62244.1| response regulator with CheY-like receiver domain and winged-helix
DNA-binding domain [Desulfobacter postgatei 2ac9]
Length = 264
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 72/115 (62%), Gaps = 7/115 (6%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGF-KVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
Y+ L+V+DD M + + ++K + +VE+AENGKEA+ +F +F ++ +D EMP M
Sbjct: 11 YYILLVEDDKMSQVVVEGMIKKLNLGRVEIAENGKEALKMF-CSHRFDLILMDGEMPEMS 69
Query: 86 GIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
GI+A A+RA++ + + I+ +T+ +E ++ +F+ G+D KPL+ ++
Sbjct: 70 GIDAALAIRAIEKDKDLSRTPIIALTAHTTEEDKALFLNNGMDEFLKKPLSPTRL 124
>gi|354568007|ref|ZP_08987174.1| PAS/PAC sensor hybrid histidine kinase [Fischerella sp. JSC-11]
gi|353541681|gb|EHC11148.1| PAS/PAC sensor hybrid histidine kinase [Fischerella sp. JSC-11]
Length = 665
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/125 (32%), Positives = 72/125 (57%), Gaps = 13/125 (10%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y L+VDD+ R+ +LK +GF+++ AENG++ + ++ + HI+F+DM+MP+MDG
Sbjct: 424 YRLLIVDDNQDHRQCLIKLLKPLGFEIQQAENGQQGIAIWESWCP-HIIFMDMQMPIMDG 482
Query: 87 IEATKAMRAMKVES------------KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
EAT+ ++ + S KI+ +T+ E +R+V + AG D +KP + +
Sbjct: 483 YEATREIKRREQSSWGDRENHLPSHTKIIALTAYAFEEQRQVMIAAGCDDFISKPFSEEE 542
Query: 135 IVPLL 139
I L
Sbjct: 543 IFAQL 547
>gi|254443126|ref|ZP_05056602.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Verrucomicrobiae bacterium DG1235]
gi|198257434|gb|EDY81742.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Verrucomicrobiae bacterium DG1235]
Length = 724
Score = 72.8 bits (177), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/113 (36%), Positives = 67/113 (59%), Gaps = 4/113 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD P+ + I MIL+ +GF+ ++A NG EA+D+ + +VF+D +MP MDG EA
Sbjct: 590 LIVDDHPLNQGIARMILRRLGFQADIAVNGVEALDM-TANRNYDLVFMDCQMPEMDGFEA 648
Query: 90 TKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+ +R + + IV +T+ E +R+ + G+D TKP+ +I L
Sbjct: 649 TREIRKREKNGTRTTIVAMTASALEEDRQKCLDIGMDDYLTKPVKPQEIAQAL 701
>gi|418398974|ref|ZP_12972526.1| response regulator receiver protein [Sinorhizobium meliloti
CCNWSX0020]
gi|359507066|gb|EHK79576.1| response regulator receiver protein [Sinorhizobium meliloti
CCNWSX0020]
Length = 121
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M R + S L GF V +AENGK V+L + K ++ +DM +PVMDG EA
Sbjct: 5 LLVEDNEMNRDMLSRRLSRRGFDVLIAENGKAGVELAES-QKPDLILMDMSLPVMDGWEA 63
Query: 90 TKAMRAMKVESKI--VGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ ++A + S+I + +T+ ++RE+ ++AG D +KP+ + ++V +E+L
Sbjct: 64 TRRIKANPLTSRIPVIALTAHAMASDREMALEAGCDDYDSKPVDLPQLVRKIEQL 118
>gi|424636619|ref|ZP_18074630.1| his Kinase A domain protein [Vibrio cholerae HC-55A1]
gi|408024929|gb|EKG62009.1| his Kinase A domain protein [Vibrio cholerae HC-55A1]
Length = 572
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 439 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 498
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R ++ I+ +T+ + ++++ + AG++ KP+
Sbjct: 499 FDLVLMDISMPIMDGIAATKILRDKHIDIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 558
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 559 SKDIMEVVKRF 569
>gi|345886078|ref|ZP_08837352.1| hypothetical protein HMPREF0178_00126 [Bilophila sp. 4_1_30]
gi|345040823|gb|EGW45047.1| hypothetical protein HMPREF0178_00126 [Bilophila sp. 4_1_30]
Length = 1176
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 10/142 (7%)
Query: 14 ARISENPVSKNRPYF----ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
R+ P P F LV +D+P + I + + G ++ + NGK+A+D R G
Sbjct: 790 GRLHPQPSPMETPLFHDVRILVAEDNPTNQEIMEALFEDTGVQLTIVSNGKQALDALRVG 849
Query: 70 A----KFHIVFIDMEMPVMDGIEATKAMRAM-KVES-KIVGVTSRNSETEREVFMQAGLD 123
A +F +V +D++MPVMDG EAT+ +R M ++E IV +T+ ++ + AG+
Sbjct: 850 AQRGERFDLVLMDVQMPVMDGYEATRIIRTMPELEGLPIVAITAHAMHEDKMRALSAGIA 909
Query: 124 LCYTKPLTMAKIVPLLEELQKN 145
+KPL+ A + L L N
Sbjct: 910 RYLSKPLSRAALFGTLRALLPN 931
>gi|320158979|ref|YP_004191357.1| CheY-like receiver [Vibrio vulnificus MO6-24/O]
gi|319934291|gb|ADV89154.1| CheY-like receiver [Vibrio vulnificus MO6-24/O]
Length = 881
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ M ++I S L+ GF + NG+EA+D G KF V +D MPVMDGI A
Sbjct: 761 LIAEDNLMNQKIASFFLEKAGFDYLITSNGQEALDAITQGGKFDAVLMDCMMPVMDGITA 820
Query: 90 TKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
T+ +R + E + I+ +T+ E + + +AG+D KP ++ L EL+
Sbjct: 821 TREIRRWETEQGSGKTPIIALTASVLEEDIQSCFEAGMDAYLPKPYKSNQLYDLFSELK 879
>gi|317485574|ref|ZP_07944451.1| hsp90-like protein [Bilophila wadsworthia 3_1_6]
gi|316923254|gb|EFV44463.1| hsp90-like protein [Bilophila wadsworthia 3_1_6]
Length = 1176
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 74/142 (52%), Gaps = 10/142 (7%)
Query: 14 ARISENPVSKNRPYF----ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
R+ P P F LV +D+P + I + + G ++ + NGK+A+D R G
Sbjct: 790 GRLHPQPSPMETPLFHDVRILVAEDNPTNQEIMEALFEDTGVQLTIVSNGKQALDALRVG 849
Query: 70 A----KFHIVFIDMEMPVMDGIEATKAMRAM-KVES-KIVGVTSRNSETEREVFMQAGLD 123
A +F +V +D++MPVMDG EAT+ +R M ++E IV +T+ ++ + AG+
Sbjct: 850 AQRGERFDLVLMDVQMPVMDGYEATRIIRTMPELEGLPIVAITAHAMHEDKMRALSAGIA 909
Query: 124 LCYTKPLTMAKIVPLLEELQKN 145
+KPL+ A + L L N
Sbjct: 910 RYLSKPLSRAALFGTLRALLPN 931
>gi|254228337|ref|ZP_04921764.1| response regulator receiver domain protein [Vibrio sp. Ex25]
gi|151939143|gb|EDN57974.1| response regulator receiver domain protein [Vibrio sp. Ex25]
Length = 1059
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 39/140 (27%), Positives = 81/140 (57%), Gaps = 8/140 (5%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E S ++++ + P+ R L+V+D+ + +++ S++L G++ EVAENG+ AV++
Sbjct: 920 EKTSHAEQSEATVTPIRSER---ILLVEDNRVNQKVASLLLSKAGYQFEVAENGQVAVEM 976
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQA 120
F+ F I+ +D MP+MDG EA++ +RA + ++ I+ +T+ + + + +
Sbjct: 977 FQKDGGFDIILMDCMMPIMDGFEASRQIRAYEASKGLPKTPIIALTASVVDDDIQRCFDS 1036
Query: 121 GLDLCYTKPLTMAKIVPLLE 140
G+D KP+ K++ +E
Sbjct: 1037 GMDAYVPKPVRREKLLYQIE 1056
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 38/120 (31%), Positives = 67/120 (55%), Gaps = 8/120 (6%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
+ P +K P LVVDD+ + ++I + + GF ++A NG+EAVD+F+ ++ ++
Sbjct: 767 TTTPNAKTLPKI-LVVDDNTVNQKIAGLHVTKAGFDFDIAVNGEEAVDMFQQN-QYCLIL 824
Query: 77 IDMEMPVMDGIEATKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+D MPVMDG EATK +R ++ + K I+ +T+ + + + G+D KP
Sbjct: 825 MDCMMPVMDGFEATKMIRQIEAKEKRTVKIPIIALTASVVDDDIQKCFDVGMDDYVPKPF 884
>gi|342874915|gb|EGU76822.1| hypothetical protein FOXB_12719 [Fusarium oxysporum Fo5176]
Length = 1228
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 77/148 (52%), Gaps = 18/148 (12%)
Query: 10 SSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
SS+ R + P ++ + L+VDD+ + + +M +K GF E AENG+EAV+ F+
Sbjct: 1080 SSQDTRKQKKPEMPSKAH-VLLVDDNKINLNLLTMFMKKCGFSYEEAENGEEAVETFKKS 1138
Query: 70 A------------KFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSET 112
F + +D+ MPVM+G+EATK +R ++ E K + +T S
Sbjct: 1139 TIGDAEPGTLVKKHFDYILMDISMPVMNGVEATKRIRKLEAEYKVPRTTVFALTGLASAD 1198
Query: 113 EREVFMQAGLDLCYTKPLTMAKIVPLLE 140
R M AG+DL KP+ A++ ++E
Sbjct: 1199 ARLDAMSAGVDLFLPKPVKFAELKTMIE 1226
>gi|308049363|ref|YP_003912929.1| integral membrane sensor hybrid histidine kinase [Ferrimonas
balearica DSM 9799]
gi|307631553|gb|ADN75855.1| integral membrane sensor hybrid histidine kinase [Ferrimonas
balearica DSM 9799]
Length = 788
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/120 (33%), Positives = 68/120 (56%), Gaps = 1/120 (0%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT-GAKFHIVFIDMEMPV 83
+P L+V+D + R + +LK +G +V +A NG++AV+ R G F + +D+ MPV
Sbjct: 668 QPLNLLLVEDVDINRLVMKRLLKKMGAQVHLACNGQQAVERVRAEGDTFDAILMDIHMPV 727
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
MDGIEAT+ +RA+ I+ +T+ + R QAG TKP +++ +L ++
Sbjct: 728 MDGIEATRQIRALNPSMPIIALTANITREMRATCQQAGFHDFLTKPFKEQELLEVLNQIH 787
>gi|326424287|ref|NP_762701.2| chemotaxis protein CheY [Vibrio vulnificus CMCP6]
gi|319999673|gb|AAO07691.2| FOG: CheY-like receiver [Vibrio vulnificus CMCP6]
Length = 881
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ M ++I S L+ GF + NG+EA+D G KF V +D MPVMDGI A
Sbjct: 761 LIAEDNLMNQKIASFFLEKAGFDYLITSNGQEALDAITQGGKFDAVLMDCMMPVMDGITA 820
Query: 90 TKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
T+ +R + E + I+ +T+ E + + +AG+D KP ++ L EL+
Sbjct: 821 TREIRRWETEQGSGKTPIIALTASVLEEDIQSCFEAGMDAYLPKPYKSNQLYDLFSELK 879
>gi|284041387|ref|YP_003391317.1| multi-sensor hybrid histidine kinase [Spirosoma linguale DSM 74]
gi|283820680|gb|ADB42518.1| multi-sensor hybrid histidine kinase [Spirosoma linguale DSM 74]
Length = 863
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 76/125 (60%), Gaps = 9/125 (7%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P S R LVV+D+ M +++ +LK +G++ +VA++G++A+D+ + F I+ +D+
Sbjct: 602 PRSSQRVVRVLVVEDNLMNQKLVLQVLKHLGYQGQVADDGRKAIDILQKDT-FDIILMDL 660
Query: 80 EMPVMDGIEATKAMRA-MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
+MPVMDG E T+ +R+ + I+ +T+ +E+E ++AG++ +KP
Sbjct: 661 QMPVMDGYETTRYIRSKINTTVPIIAMTAHALPSEKEECLKAGMNDFLSKPFQ------- 713
Query: 139 LEELQ 143
+EELQ
Sbjct: 714 IEELQ 718
>gi|37676889|ref|NP_937285.1| hypothetical protein VVA1229 [Vibrio vulnificus YJ016]
gi|37201433|dbj|BAC97255.1| conserved hypothetical protein [Vibrio vulnificus YJ016]
Length = 881
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ M ++I S L+ GF + NG+EA+D G KF V +D MPVMDGI A
Sbjct: 761 LIAEDNLMNQKIASFFLEKAGFDYLITSNGQEALDAITQGGKFDAVLMDCMMPVMDGITA 820
Query: 90 TKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
T+ +R + E + I+ +T+ E + + +AG+D KP ++ L EL+
Sbjct: 821 TREIRRWETEQGSGKTPIIALTASVLEEDIQSCFEAGMDAYLPKPYKSNQLYDLFSELK 879
>gi|429884870|ref|ZP_19366477.1| Signal transduction histidine kinase [Vibrio cholerae PS15]
gi|429228386|gb|EKY34308.1| Signal transduction histidine kinase [Vibrio cholerae PS15]
Length = 570
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 74/131 (56%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLERNHV 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R ++ I+ +T+ + ++++ + AG++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHIDIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|408374671|ref|ZP_11172355.1| sensor/response regulator hybrid [Alcanivorax hongdengensis A-11-3]
gi|407765479|gb|EKF73932.1| sensor/response regulator hybrid [Alcanivorax hongdengensis A-11-3]
Length = 904
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 40/127 (31%), Positives = 73/127 (57%), Gaps = 4/127 (3%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
+ ++ + +E V +RP L+VDD P R+ + L+ +G +VE ++G A++ F+
Sbjct: 627 SGQTQSSPTAEQAVPLSRPVEVLLVDDHPGNLRLAQVFLEDIGARVEACDSGAGALEAFK 686
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDL 124
F +VF+D++MP MDG E T +R ++ + I+ +T+ E+ER + +GLD
Sbjct: 687 R-RTFDLVFMDIQMPGMDGRETTARLRELEPAGRHTPIIALTAHALESERRELLSSGLDD 745
Query: 125 CYTKPLT 131
+KP+T
Sbjct: 746 YLSKPIT 752
>gi|291569600|dbj|BAI91872.1| two-component hybrid histidine kinase [Arthrospira platensis
NIES-39]
Length = 897
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 74/119 (62%), Gaps = 4/119 (3%)
Query: 21 VSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
+++N+P Y LVVDD+ R++ +L +GF V AENG+EA+ ++ H++F+DM
Sbjct: 672 LAENQPEYRILVVDDNWTNRKLVVKLLNPLGFHVREAENGQEAIAIWEKWEP-HLIFMDM 730
Query: 80 EMPVMDGIEATKAM-RAMKVESK-IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
MPVMDG EAT+ + R +K ++ I+ +T+ + E+ + + AG D KP + +++
Sbjct: 731 RMPVMDGYEATQLIKRHLKGQATVIIALTASALQQEKSIVLSAGCDDFVRKPFRVDQLL 789
>gi|430376208|ref|ZP_19430611.1| PAS/PAC sensor hybrid histidine kinase [Moraxella macacae 0408225]
gi|429541439|gb|ELA09467.1| PAS/PAC sensor hybrid histidine kinase [Moraxella macacae 0408225]
Length = 948
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 69/111 (62%), Gaps = 1/111 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-RTGAKFHIVFIDMEMPVMDGIE 88
LV +D+ + ++I L+++G++V +A G+EAV L + K +V +D +MP+MDG+
Sbjct: 833 LVAEDNLINQKIAKKHLETLGYEVIIANEGEEAVALLSQNREKIALVLMDCQMPIMDGLT 892
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
AT+ +RA + I+ +T+ +S+ R++ AG+D TKP+ K+ LL
Sbjct: 893 ATRQIRANQDSIPIIALTANDSDESRKLCSDAGMDGFLTKPINKQKLTKLL 943
>gi|346323491|gb|EGX93089.1| sensor histidine kinase/response regulator, putative [Cordyceps
militaris CM01]
Length = 1563
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 16/151 (10%)
Query: 11 SKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT-G 69
S R + +++ P L+ +DDP+ +I L+ VG V A NG++ LF + G
Sbjct: 1382 SSVVRPRNDSIAQESPLRTLIAEDDPINLKIMRKRLERVGHTVTHAVNGEDCAALFESNG 1441
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRAMKVESK---------------IVGVTSRNSETER 114
+ ++ +DM+MP++DG+ +TK +R+M+ ES+ I+ V++ E ER
Sbjct: 1442 SGVDVILMDMQMPIVDGLTSTKMIRSMEAESRQDGHSDMAKHNGRVPIIAVSASLVEKER 1501
Query: 115 EVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
+ ++ AG D KP+ ++ L+ + +
Sbjct: 1502 QKYVDAGFDAWILKPIDFKRLSVLMRGIHDD 1532
>gi|428320948|ref|YP_007118830.1| multi-sensor hybrid histidine kinase [Oscillatoria nigro-viridis
PCC 7112]
gi|428244628|gb|AFZ10414.1| multi-sensor hybrid histidine kinase [Oscillatoria nigro-viridis
PCC 7112]
Length = 955
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 77/137 (56%), Gaps = 3/137 (2%)
Query: 1 MMIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGK 60
+ + A S K +R V Y L+VDD + R++ IL +GF+++ A NG+
Sbjct: 719 IAVDAADIESLKPSRNVIALVPNQHTYRILIVDDKQLNRQLLIKILSPLGFELKEATNGQ 778
Query: 61 EAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAM-RAMKVE-SKIVGVTSRNSETEREVFM 118
EA++++ + H++++DM MPVMDG EAT+ + R +K + + I+ +T+ E ER V +
Sbjct: 779 EAIEIWDSWEP-HLIWMDMRMPVMDGYEATQYIKRTIKGQATAIIALTASVLEEERAVIL 837
Query: 119 QAGLDLCYTKPLTMAKI 135
AG D KP A I
Sbjct: 838 SAGCDAFLRKPFREADI 854
>gi|123475708|ref|XP_001321030.1| ATPase [Trichomonas vaginalis G3]
gi|121903848|gb|EAY08807.1| ATPase, putative [Trichomonas vaginalis G3]
Length = 1419
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 73/128 (57%), Gaps = 4/128 (3%)
Query: 21 VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDME 80
+ + P LVV+D+ + + IL+++ ++A+NG EA+ +F IVF+D +
Sbjct: 1293 IEQTSPLRILVVEDNKANQFVMKKILQNLQCSFKIADNGSEALTALDND-EFDIVFMDCQ 1351
Query: 81 MPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVP 137
MPV+DG+EAT+ +R+ E + IV +T+ E + +V M AG+D KP+ M +I
Sbjct: 1352 MPVLDGLEATRRIRSSGKEYRNVPIVALTASAVEGDEQVCMDAGMDAYLAKPVRMQQISA 1411
Query: 138 LLEELQKN 145
L++ +
Sbjct: 1412 LIKRFSSH 1419
>gi|94263689|ref|ZP_01287497.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93455888|gb|EAT06047.1| Response regulator receiver [delta proteobacterium MLMS-1]
Length = 500
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D P+ R I +L +VG +V++A NG+EAV++ R GA + V +D++MP +DG A
Sbjct: 149 LVAEDHPLNREIAQELLTAVGIEVDMANNGREAVEMARQGA-YQGVLMDIQMPELDGYRA 207
Query: 90 TKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T A+RA+ E I+ +T+ E ER+ ++AG++ +KP+
Sbjct: 208 TAAIRALPGGEELPIIAMTAHALEEERKKSLEAGMNDHVSKPV 250
>gi|386020082|ref|YP_005938106.1| sensor/response regulator hybrid protein [Pseudomonas stutzeri DSM
4166]
gi|327480054|gb|AEA83364.1| sensor/response regulator hybrid protein [Pseudomonas stutzeri DSM
4166]
Length = 914
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/146 (28%), Positives = 79/146 (54%), Gaps = 8/146 (5%)
Query: 1 MMIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGK 60
M+ E A++ ++ S +P LV +D+P+ + + +LK G+ V++A+NG+
Sbjct: 763 MLYAQEPATAGERG--SPSPAQPQGEPCILVAEDNPVNQMVVRGLLKKRGYAVQLADNGR 820
Query: 61 EAVDLFRTGAK-FHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETER 114
+AVDL+R ++ +D EMP +DG EA++ +R ++ E + I+ VT+ R
Sbjct: 821 QAVDLYRRDPHAVQLILMDCEMPELDGFEASRQIRELEAEQQLQAVPIIAVTAHVLAEHR 880
Query: 115 EVFMQAGLDLCYTKPLTMAKIVPLLE 140
+ + AG+D KPL ++ L+
Sbjct: 881 QRGLDAGMDEFIGKPLESRQLYACLD 906
>gi|300918613|ref|ZP_07135201.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 115-1]
gi|300414265|gb|EFJ97575.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 115-1]
Length = 933
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 70/119 (58%), Gaps = 1/119 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+ I
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTLEVI 916
>gi|331673737|ref|ZP_08374500.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli TA280]
gi|331069010|gb|EGI40402.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli TA280]
Length = 949
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + ++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 800 LIEMESDDPANALPTTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 859
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 860 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 918
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 919 MDSCLSKPVTL 929
>gi|46200979|ref|ZP_00055969.2| COG0642: Signal transduction histidine kinase [Magnetospirillum
magnetotacticum MS-1]
Length = 1666
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + + + S IL G V++A NG+ AVD +TG + ++ +DM+MPVMDG+ A
Sbjct: 1347 LLVEDNELNQEVASEILGDAGLVVDIAANGQIAVDKAKTG-HYDLILMDMQMPVMDGVTA 1405
Query: 90 TKAMRAMKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +RAM + I+ +T+ + +RE ++AG++ KP+
Sbjct: 1406 TREIRAMGFQDLPIIAMTANAMQADREKCLEAGMNDHIAKPI 1447
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 3/72 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG---AKFHIVFIDMEMPVMDG 86
LVVDD+ R + +L S+ F+V+ E G A+D R + +VF+D +MP MDG
Sbjct: 1200 LVVDDNENARAVLVDMLSSMSFEVDSVEGGAAAIDAIREAMLDQPYEVVFLDWQMPGMDG 1259
Query: 87 IEATKAMRAMKV 98
+E + + +++
Sbjct: 1260 LEVAERIHDIRL 1271
>gi|423706264|ref|ZP_17680647.1| sensor kinase RcsC [Escherichia coli B799]
gi|385712148|gb|EIG49103.1| sensor kinase RcsC [Escherichia coli B799]
Length = 949
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLSVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|403414634|emb|CCM01334.1| predicted protein [Fibroporia radiculosa]
Length = 1085
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/148 (29%), Positives = 78/148 (52%), Gaps = 29/148 (19%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF------------RTGA--- 70
P LVVDDDP+ R++ S +L +G +V AENG+ A+++ TG+
Sbjct: 927 PLRVLVVDDDPLTRKLMSRMLTRIGCRVSTAENGEMALEMILGTGQRATPSSEDTGSAGL 986
Query: 71 -----------KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQ 119
++ +VF+D +MPV+ G++A +R M +VGVT T+++ +++
Sbjct: 987 SMEVVPAPDEPRYAVVFLDNQMPVLSGLDAVLKLREMGRRDFVVGVTGNALLTDQQEYLE 1046
Query: 120 AGLDLCYTKPL---TMAKIVPLLEELQK 144
AG D TKP+ ++ ++ + +E +K
Sbjct: 1047 AGADHVLTKPVLEKSLKSMLAIADERRK 1074
>gi|322693858|gb|EFY85704.1| putative histidine kinase M232p [Metarhizium acridum CQMa 102]
Length = 1195
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 71/126 (56%), Gaps = 7/126 (5%)
Query: 21 VSKNRPYFA-LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFID 78
+ N+P + L+VDD+P+ +I +K + A NG+ AVDLFR G + VF+D
Sbjct: 1061 IDSNQPGTSFLLVDDNPINLKILITYMKKLRLPYRTATNGQHAVDLFREGNGLYKCVFMD 1120
Query: 79 MEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+ MP+MDG EAT+ +R ++E I +T S ++ +G+DL TKP+ +A
Sbjct: 1121 ISMPMMDGFEATRHIRNTEMEKSLHRCTIFALTGLASADAQQEAFTSGIDLFLTKPVKLA 1180
Query: 134 KIVPLL 139
++ +L
Sbjct: 1181 ELSQIL 1186
>gi|450190784|ref|ZP_21890945.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli SEPT362]
gi|449320092|gb|EMD10129.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli SEPT362]
Length = 506
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 74/131 (56%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + +++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 357 LIEMESDDPANALPLTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 416
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 417 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 475
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 476 MDSCLSKPVTL 486
>gi|417952117|ref|ZP_12595180.1| putative sensor protein [Vibrio splendidus ATCC 33789]
gi|342802523|gb|EGU37936.1| putative sensor protein [Vibrio splendidus ATCC 33789]
Length = 871
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/118 (34%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M ++I S L+ G++ +A NG+EAVD+ GA+F V +D MPVMDGI A
Sbjct: 751 LIVEDNLMNQKIASFFLEQAGYEYLIASNGQEAVDVITQGAQFDAVLMDCMMPVMDGITA 810
Query: 90 TKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+A+R + E + I+ +T+ E + + AG++ KP ++ L L
Sbjct: 811 TRAIRQWESEQQTTPLPIIALTASVLEEDIKDCFDAGMNAYLPKPYKSHQLYDLFSSL 868
>gi|414069249|ref|ZP_11405244.1| multi-sensor hybrid histidine kinase [Pseudoalteromonas sp. Bsw20308]
gi|410808364|gb|EKS14335.1| multi-sensor hybrid histidine kinase [Pseudoalteromonas sp. Bsw20308]
Length = 1587
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 80/140 (57%), Gaps = 14/140 (10%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
SS KK ++ E P L+V+D+P+ +++ +++LK + + +AENG+ A+D+ T
Sbjct: 1453 SSLKKEKLGE-------PIQILLVEDNPINQQVSTLMLKKLNCNITLAENGQLAIDILNT 1505
Query: 69 GAK--FHIVFIDMEMPVMDGIEATKAMRA-----MKVESKIVGVTSRNSETEREVFMQAG 121
+ F V +D +MPVMDG +ATKA+R + KI+ +T+ + +++ AG
Sbjct: 1506 HGQGYFKAVLMDCQMPVMDGFDATKAIRNGLAGDKHKDIKIIALTANAMDADKQRCFAAG 1565
Query: 122 LDLCYTKPLTMAKIVPLLEE 141
+D +KP+ + + LE+
Sbjct: 1566 MDDYLSKPIQLDFLKDKLEQ 1585
Score = 41.6 bits (96), Expect = 0.096, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-----FHIVFIDMEMPVM 84
LVVDD+ R + S L+ G V +A + +A+ + + + I +DM+MP M
Sbjct: 1316 LVVDDNETNRIVISQQLEHWGAHVALACDAYDALAMCESRISSNLKMYDIAVLDMQMPGM 1375
Query: 85 DGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
DGI KA++A +V +TS + + G + KP+T A ++ L +
Sbjct: 1376 DGIGLCKALKANDDFKNMPLVMMTSIAGMEGAQRYSSIGFQAYFPKPVTTADLISALSVI 1435
Query: 143 QKN 145
N
Sbjct: 1436 TNN 1438
>gi|359452292|ref|ZP_09241643.1| hypothetical protein P20495_0382 [Pseudoalteromonas sp. BSi20495]
gi|358050636|dbj|GAA77892.1| hypothetical protein P20495_0382 [Pseudoalteromonas sp. BSi20495]
Length = 1587
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/140 (30%), Positives = 80/140 (57%), Gaps = 14/140 (10%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
SS KK ++ E P L+V+D+P+ +++ +++LK + + +AENG+ A+D+ T
Sbjct: 1453 SSLKKEKLGE-------PIQILLVEDNPINQQVSTLMLKKLNCNITLAENGQLAIDILNT 1505
Query: 69 GAK--FHIVFIDMEMPVMDGIEATKAMRA-----MKVESKIVGVTSRNSETEREVFMQAG 121
+ F V +D +MPVMDG +ATKA+R + KI+ +T+ + +++ AG
Sbjct: 1506 HGQGYFKAVLMDCQMPVMDGFDATKAIRNGLAGDKHKDIKIIALTANAMDADKQRCFAAG 1565
Query: 122 LDLCYTKPLTMAKIVPLLEE 141
+D +KP+ + + LE+
Sbjct: 1566 MDDYLSKPIQLDFLKDKLEQ 1585
Score = 41.6 bits (96), Expect = 0.097, Method: Composition-based stats.
Identities = 34/123 (27%), Positives = 57/123 (46%), Gaps = 7/123 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-----FHIVFIDMEMPVM 84
LVVDD+ R + S L+ G V +A + +A+ + + + I +DM+MP M
Sbjct: 1316 LVVDDNETNRIVISQQLEHWGAHVALACDAYDALAMCESRISSNLKMYDIAVLDMQMPGM 1375
Query: 85 DGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
DGI KA++A +V +TS + + G + KP+T A ++ L +
Sbjct: 1376 DGIGLCKALKANDDFKNMPLVMMTSIAGMEGAQRYSSIGFQAYFPKPVTTADLISALSVI 1435
Query: 143 QKN 145
N
Sbjct: 1436 TNN 1438
>gi|158520998|ref|YP_001528868.1| PAS/PAC sensor hybrid histidine kinase [Desulfococcus oleovorans
Hxd3]
gi|158509824|gb|ABW66791.1| PAS/PAC sensor hybrid histidine kinase [Desulfococcus oleovorans
Hxd3]
Length = 1791
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP L+V+D + RR+ +L +G +A NG EAV LF + F +V +D++MPVM
Sbjct: 1669 RPLRILLVEDSAISRRVLLQMLDKMGHTATIAVNGAEAVKLF-SRQSFDMVLMDIQMPVM 1727
Query: 85 DGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
DGI ATK +++M+ E+ ++ +T+ +RE + GLD KP+ M
Sbjct: 1728 DGIAATKQIKSMQKETGKKVPVIAITANAMAGDRERILSQGLDDYVAKPVKM 1779
>gi|162458745|ref|NP_001105858.1| LOC732762 [Zea mays]
gi|89242033|dbj|BAE80687.1| histidine kinase [Zea mays]
Length = 995
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + R+ + LK G KVE E+GK+A+ + KFH+ +D++MP MDG EA
Sbjct: 853 LVVDDNKVNLRVAAGTLKKFGAKVECVESGKDALASLQVPHKFHLCLMDIQMPEMDGFEA 912
Query: 90 TKAMRAMKVESKIVGVTSRNSETE 113
TK +RAM+ ++ V +SET+
Sbjct: 913 TKQIRAMEAKANEQAVACDDSETD 936
>gi|224053436|ref|XP_002297818.1| extra response regulator [Populus trichocarpa]
gi|222845076|gb|EEE82623.1| extra response regulator [Populus trichocarpa]
Length = 209
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 65/116 (56%), Gaps = 9/116 (7%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFK------VEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
L+VDDD +R + S G + V+ A+NG+EAV L GA F I+ +D +MPV
Sbjct: 96 LIVDDDRAVRDSIRRAMMSYGAQKQFIIDVQEAKNGREAVYLHLGGASFDIILMDSQMPV 155
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
M G EA K +R M V+S+I+GV+ + E+ F + ++ KPL + KI +
Sbjct: 156 MKGHEAVKKLRQMGVKSRIIGVS---YQFEKPAFRGSSINKWIKKPLNLEKIAAIF 208
>gi|90019299|gb|ABD84300.1| signal transduction histidine kinase-like [Yersinia sp. MH-1]
Length = 166
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ + L S+G++V A +G +A+ + + IV D+ MP MDG
Sbjct: 48 LVVDDHPINRRLLADQLTSLGYQVLTANDGIDALTVLGSNP-IDIVLTDVNMPNMDGYRL 106
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
T+ +R ++ ++GVT+ E++ + AG+D C +KP+T+ + +L
Sbjct: 107 TQCLREQELHFPVIGVTANALAEEKQRCLDAGMDDCLSKPVTLDTLRQMLNH 158
>gi|452978366|gb|EME78130.1| hypothetical protein MYCFIDRAFT_94454, partial [Pseudocercospora
fijiensis CIRAD86]
Length = 1117
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 12/122 (9%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-------AKFHIVFIDMEMP 82
L+VDD+ + R++ M +K F AENG+EA+DL+R+ F V +D+ MP
Sbjct: 996 LLVDDNKINRQLLVMFMKRCKFTYLEAENGQEALDLYRSSISDLPNHKHFDFVLMDISMP 1055
Query: 83 VMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVP 137
+MDG+EAT+ +R + E+ ++ +T SE RE +G+D+ KP+ A++
Sbjct: 1056 IMDGMEATRRIRDFEKENGLKRVTVIALTGLASEKAREEAETSGIDVFLPKPVKFAELRK 1115
Query: 138 LL 139
LL
Sbjct: 1116 LL 1117
>gi|192359994|ref|YP_001980883.1| MmoS protein [Cellvibrio japonicus Ueda107]
gi|190686159|gb|ACE83837.1| MmoS [Cellvibrio japonicus Ueda107]
Length = 803
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/119 (33%), Positives = 66/119 (55%), Gaps = 6/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA-KFHIVFIDMEMPVMDGIE 88
LV +D+P+ R + +L +G + AENG+EAVDL GA +F ++ +D EMP MDG E
Sbjct: 673 LVAEDNPVNRMVIKGLLGKLGIQPVFAENGREAVDLVHHGAQRFDLILMDCEMPEMDGFE 732
Query: 89 ATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
AT+ +R ++ S +V +T+ + RE +G++ KP+T + + L
Sbjct: 733 ATRNIRELERRSGRPAVPVVALTAHALQEHREAVFASGMNYYLAKPITFDSLYAAFDAL 791
>gi|84387561|ref|ZP_00990579.1| hypothetical protein V12B01_11270 [Vibrio splendidus 12B01]
gi|84377609|gb|EAP94474.1| hypothetical protein V12B01_11270 [Vibrio splendidus 12B01]
Length = 863
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 68/118 (57%), Gaps = 5/118 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M ++I S L+ G++ +A NG+EAVD+ GA+F + +D MPVMDGI A
Sbjct: 743 LIVEDNLMNQKIASFFLEQAGYEYLIASNGQEAVDVITQGAQFDAILMDCMMPVMDGITA 802
Query: 90 TKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+A+R + + + I+ +T+ E + + +AG++ KP ++ L L
Sbjct: 803 TRAIRQWETDQQAAPLPIIALTASVLEEDIKHCFEAGMNAYLPKPYKSHQLYDLFSSL 860
>gi|427724850|ref|YP_007072127.1| histidine kinase [Leptolyngbya sp. PCC 7376]
gi|427356570|gb|AFY39293.1| histidine kinase [Leptolyngbya sp. PCC 7376]
Length = 737
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 69/114 (60%), Gaps = 4/114 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D + + I +L +GF+ ++AENG EA+ A + +V +D MP MDGI A
Sbjct: 599 LVVEDVKLNQIIICSMLTKLGFEADLAENGLEAIAALNKRA-YDVVLMDWHMPKMDGITA 657
Query: 90 TKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
TK +R ++ + I+ VT+ S +R+ + AG+D +KPLT+ ++ P++E
Sbjct: 658 TKKIRELQDIVPQPWIIAVTASASPEDRQTCLDAGMDDYLSKPLTLEQLTPVIE 711
>gi|407067989|ref|ZP_11098827.1| sensor protein [Vibrio cyclitrophicus ZF14]
Length = 880
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/118 (33%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M ++I S L+ G++ +A NG+EAVD+ GA+F + +D MPVMDGI A
Sbjct: 760 LIVEDNLMNQKIASFFLEQAGYEYLIASNGQEAVDVITQGAQFDAILMDCMMPVMDGITA 819
Query: 90 TKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+A+R +++ + I+ +T+ E + + +AG++ KP ++ L L
Sbjct: 820 TRAIRQWELDQQAIPLPIIALTASVLEEDIKDCFEAGMNAYLPKPYKSHQLYDLFSSL 877
>gi|218548321|ref|YP_002382112.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia fergusonii ATCC 35469]
gi|218355862|emb|CAQ88477.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia fergusonii ATCC 35469]
Length = 949
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 814 VADKATDSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVISKNA-IDIV 872
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 873 LSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|147525|gb|AAA24503.1| capsule synthesis regulator component C [Escherichia coli]
Length = 933
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|423104377|ref|ZP_17092079.1| hypothetical protein HMPREF9686_02983 [Klebsiella oxytoca 10-5242]
gi|376382949|gb|EHS95678.1| hypothetical protein HMPREF9686_02983 [Klebsiella oxytoca 10-5242]
Length = 1059
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
+R L+ DD P R + L ++G + A NG+EA+ + + +V D+ MPV
Sbjct: 826 DRALRVLIADDHPSSRLLLKRQLANLGIAADEAGNGEEALRYLQQD-HYDLVITDLNMPV 884
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
MDGI T+ +R + I G+T+ + ERE + AG+ C KP+T+A+I LL E+
Sbjct: 885 MDGITLTRQVRGFDSKLPIWGLTATAQQHERERCLAAGMTGCLFKPITLAQISRLLAEVS 944
Query: 144 K 144
+
Sbjct: 945 E 945
>gi|424815716|ref|ZP_18240867.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia fergusonii ECD227]
gi|325496736|gb|EGC94595.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia fergusonii ECD227]
Length = 949
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 814 VADKATDSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVISKNA-IDIV 872
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 873 LSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|422806223|ref|ZP_16854655.1| RcsC Alpha-Beta-Loop [Escherichia fergusonii B253]
gi|324112761|gb|EGC06737.1| RcsC Alpha-Beta-Loop [Escherichia fergusonii B253]
Length = 949
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 68/117 (58%), Gaps = 1/117 (0%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 814 VADKATDSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVISKNA-IDIV 872
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 873 LSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|254282460|ref|ZP_04957428.1| multi-sensor Hybrid Histidine Kinase [gamma proteobacterium NOR51-B]
gi|219678663|gb|EED35012.1| multi-sensor Hybrid Histidine Kinase [gamma proteobacterium NOR51-B]
Length = 1316
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 70/118 (59%), Gaps = 6/118 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D+ + + + + IL S+GF +AENG+ V LF + F +V +D +MP+MDG +A
Sbjct: 1051 LVVEDNVVNQMLAAEILASLGFDTTIAENGERGVALF-SEHHFDLVLMDCQMPIMDGFDA 1109
Query: 90 TKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ +R +V S I+ +T+ + ERE ++AG+D KP T +I + +L
Sbjct: 1110 TREIRRFEVAEGRHPSVIIALTAGSVANERERALEAGMDDFLMKPCTAPQIEKAIRKL 1167
>gi|56480068|ref|NP_708113.2| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Shigella flexneri 2a str. 301]
gi|56383619|gb|AAN43820.2| sensor for ctr capsule biosynthesis, probable histidine kinase
acting on RcsB [Shigella flexneri 2a str. 301]
Length = 949
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|162461543|ref|NP_001105913.1| histidine kinase [Zea mays]
gi|89242037|dbj|BAE80689.1| histidine kinase [Zea mays]
Length = 996
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 53/84 (63%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + R+ + LK G KVE E+GK+A+ L KFH+ +D++MP MDG EA
Sbjct: 854 LVVDDNKVNLRVAAGTLKKFGAKVECVESGKDALALLHVPYKFHLCLMDIQMPEMDGFEA 913
Query: 90 TKAMRAMKVESKIVGVTSRNSETE 113
TK +RAM+ ++ V +SE +
Sbjct: 914 TKQIRAMEAKANEQAVACDDSEID 937
>gi|414872484|tpg|DAA51041.1| TPA: putative histidine kinase family protein [Zea mays]
Length = 997
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/84 (42%), Positives = 54/84 (64%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + R+ + LK G KVE E+GK+A+ + KFH+ +D++MP MDG EA
Sbjct: 855 LVVDDNKVNLRVAAGTLKKFGAKVECVESGKDALASLQVPHKFHLCLMDIQMPEMDGFEA 914
Query: 90 TKAMRAMKVESKIVGVTSRNSETE 113
TK +RAM+ ++ V +SET+
Sbjct: 915 TKQIRAMEAKANEQAVACDDSETD 938
>gi|423201080|ref|ZP_17187660.1| hypothetical protein HMPREF1167_01243 [Aeromonas veronii AER39]
gi|404618063|gb|EKB14984.1| hypothetical protein HMPREF1167_01243 [Aeromonas veronii AER39]
Length = 905
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 8 ASSSKKARISENPVSKN-RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
+ S + ++ P + +P L VDD+ ++ + +LK + +V V +NGKEAV
Sbjct: 645 SPESSRQKLPAQPAPRQLQPIKVLAVDDNAANLKLIAAMLKEMVSQVVVCKNGKEAVKQA 704
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDL 124
++ F I+F+D++MP+MDGI AT+A+R ++ + IV VT+ ERE ++ G+D
Sbjct: 705 QS-QPFDIIFMDIQMPIMDGISATQAIRNQSLNTTTPIVAVTAHAIPGERERLIRQGMDD 763
Query: 125 CYTKPLTMAKIVPLLEEL 142
KP+ + + L+ +
Sbjct: 764 YLAKPIDESMLAQLITDF 781
>gi|158338757|ref|YP_001519934.1| two-component hybrid sensor and regulator [Acaryochloris marina
MBIC11017]
gi|158308998|gb|ABW30615.1| two-component hybrid sensor and regulator, putative [Acaryochloris
marina MBIC11017]
Length = 834
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 45/123 (36%), Positives = 71/123 (57%), Gaps = 8/123 (6%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D + + L SVGF+V+ A NG+EAV F+ H++++DM MPVMDG
Sbjct: 622 YRILVVEDHLDSQLLLQSWLTSVGFEVKTANNGREAVSQFQAWHS-HLIWMDMRMPVMDG 680
Query: 87 IEATKAMRAMKVESK-------IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
++AT+A+RA+ ES+ I+ +T+ E RE + AG + KP + +I L+
Sbjct: 681 MQATRAIRALVQESESQAPEPVILALTASVFEENREKILSAGCNKFVRKPYKIQEIYRLM 740
Query: 140 EEL 142
+
Sbjct: 741 ADF 743
>gi|432899237|ref|ZP_20109929.1| sensor kinase RcsC [Escherichia coli KTE192]
gi|433029194|ref|ZP_20217053.1| sensor kinase RcsC [Escherichia coli KTE109]
gi|431426889|gb|ELH08933.1| sensor kinase RcsC [Escherichia coli KTE192]
gi|431542934|gb|ELI17930.1| sensor kinase RcsC [Escherichia coli KTE109]
Length = 949
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|239908302|ref|YP_002955043.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
gi|239798168|dbj|BAH77157.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
Length = 1011
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
+V +D P+ +R+ S +L +G + ENG+EAV L+ F+ + +D++MP+MDGIEA
Sbjct: 769 MVAEDSPVNQRVISHVLHKMGHSFTIVENGQEAVTLWEK-RNFNAILMDVQMPIMDGIEA 827
Query: 90 TKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +RA+ + I+ +T+ +++RE + AG++ +KPL
Sbjct: 828 TRRIRALDTHRENPVPIIALTAHAMQSDRERCLDAGMNDYLSKPL 872
>gi|432802437|ref|ZP_20036416.1| sensor kinase RcsC [Escherichia coli KTE84]
gi|431348226|gb|ELG35084.1| sensor kinase RcsC [Escherichia coli KTE84]
Length = 949
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|215487437|ref|YP_002329868.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O127:H6 str. E2348/69]
gi|222156975|ref|YP_002557114.1| Sensor kinase protein rcsC [Escherichia coli LF82]
gi|300983211|ref|ZP_07176488.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 45-1]
gi|301048966|ref|ZP_07195955.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 185-1]
gi|387617579|ref|YP_006120601.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O83:H1 str. NRG 857C]
gi|387830153|ref|YP_003350090.1| two-component sensor kinase [Escherichia coli SE15]
gi|417662831|ref|ZP_12312412.1| two-component sensor protein RcsC [Escherichia coli AA86]
gi|418997572|ref|ZP_13545166.1| his Kinase A domain protein [Escherichia coli DEC1A]
gi|422365126|ref|ZP_16445630.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 153-1]
gi|422370204|ref|ZP_16450598.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 16-3]
gi|442607996|ref|ZP_21022756.1| Two-component sensor protein RcsC [Escherichia coli Nissle 1917]
gi|215265509|emb|CAS09911.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O127:H6 str. E2348/69]
gi|222033980|emb|CAP76721.1| Sensor kinase protein rcsC [Escherichia coli LF82]
gi|281179310|dbj|BAI55640.1| two-component sensor kinase [Escherichia coli SE15]
gi|300299217|gb|EFJ55602.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 185-1]
gi|300408612|gb|EFJ92150.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 45-1]
gi|312946840|gb|ADR27667.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O83:H1 str. NRG 857C]
gi|315292174|gb|EFU51526.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 153-1]
gi|315298048|gb|EFU57317.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 16-3]
gi|330912049|gb|EGH40559.1| two-component sensor protein RcsC [Escherichia coli AA86]
gi|377843399|gb|EHU08439.1| his Kinase A domain protein [Escherichia coli DEC1A]
gi|441710601|emb|CCQ08733.1| Two-component sensor protein RcsC [Escherichia coli Nissle 1917]
Length = 933
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|313683144|ref|YP_004060882.1| multi-sensor hybrid histidine kinase [Sulfuricurvum kujiense DSM
16994]
gi|313156004|gb|ADR34682.1| multi-sensor hybrid histidine kinase [Sulfuricurvum kujiense DSM
16994]
Length = 1421
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 67/102 (65%), Gaps = 1/102 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGIE 88
L+V+D+ + + + ++LK G +V+ A+NGKEAVD+F + + FHI+ +D++MP+M G E
Sbjct: 1101 LLVEDNELNQEVALLMLKKAGIEVKTAQNGKEAVDIFLSNPEYFHIILMDLQMPIMSGYE 1160
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
A+ +R + I+ +T+ +RE ++AG++ +KP+
Sbjct: 1161 ASAIIRENDKKIPIIALTAAAMVEDREKVIEAGMNDHLSKPI 1202
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 65/126 (51%), Gaps = 9/126 (7%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL-FRTGAK---FHIVFID 78
+N Y L+VDD + R I + ++ G + E A G+EA+++ + A + +V +D
Sbjct: 948 ENEGYKILIVDDQEISRIILREMAENFGCQTEEASGGEEAIEMILKADADKRGYDVVIMD 1007
Query: 79 MEMPVMDGIEATKAMRAMKVE----SKIVGVTSRNSETEREVFMQA-GLDLCYTKPLTMA 133
MP MDG EA + + ++ E +K+ + ++ ++ E+ ++ +D KP+T +
Sbjct: 1008 WYMPGMDGKEAIRQLNQLEREGVLKTKVPSILMVSAHSKEEIHVEEMEIDAFLAKPVTSS 1067
Query: 134 KIVPLL 139
+ L
Sbjct: 1068 TLFDAL 1073
>gi|295107999|emb|CBL21952.1| Signal transduction histidine kinase [Ruminococcus obeum A2-162]
Length = 968
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/117 (34%), Positives = 72/117 (61%), Gaps = 6/117 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR--TGAKFHIVFIDMEMPVMDGI 87
L+V+D+ + R I IL GF V+ AENG EAV+ + T K+ +V +D++MPVM+G
Sbjct: 848 LLVEDNELNREIAVEILNEYGFLVDTAENGAEAVEKVKNSTSGKYDLVLMDVQMPVMNGY 907
Query: 88 EATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
EATK +RA+ + I+ +T+ + +R+ ++ G+D +KP+ + +++ L+
Sbjct: 908 EATKQIRALDDPALSGITILAMTANAFDEDRKKALEYGMDGFLSKPIVIEELISTLQ 964
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT----GAKFHIVFIDMEMPVM 84
ALVVDDD + +L VG + E +GKEAV R G FH ID +P M
Sbjct: 705 ALVVDDDFNTCDSVTKMLVRVGMRSEWTLSGKEAVLRARQSMELGDAFHAYIIDWRLPDM 764
Query: 85 DGIEATKAMRAMKVESKIVGVTSRN-SETEREVFMQAGLDLCYTKPLTMAKI 135
+GIE T+ +R++ ++ I+ +T+ + S+ E E AG+ KPL M+ I
Sbjct: 765 NGIEVTRQIRSLGDDTPIIILTAYDWSDIEAEA-RAAGVTAFCAKPLFMSDI 815
>gi|423205365|ref|ZP_17191921.1| hypothetical protein HMPREF1168_01556 [Aeromonas veronii AMC34]
gi|404624160|gb|EKB21000.1| hypothetical protein HMPREF1168_01556 [Aeromonas veronii AMC34]
Length = 905
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 8 ASSSKKARISENPVSKN-RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
+ S + ++ P + +P L VDD+ ++ + +LK + +V V +NGKEAV
Sbjct: 645 SPESSRQKLPAQPAPRQLQPIKVLAVDDNAANLKLIAAMLKEMVSQVVVCKNGKEAVKQA 704
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDL 124
++ F I+F+D++MP+MDGI AT+A+R ++ + IV VT+ ERE ++ G+D
Sbjct: 705 QS-QPFDIIFMDIQMPIMDGISATQAIRNQSLNTTTPIVAVTAHAIPGERERLIRQGMDD 763
Query: 125 CYTKPLTMAKIVPLLEEL 142
KP+ + + L+ +
Sbjct: 764 YLAKPIDESMLAQLITDF 781
>gi|423125291|ref|ZP_17112970.1| hypothetical protein HMPREF9694_01982 [Klebsiella oxytoca 10-5250]
gi|376399258|gb|EHT11876.1| hypothetical protein HMPREF9694_01982 [Klebsiella oxytoca 10-5250]
Length = 1059
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
+R L+ DD P R + L ++G + A NG+EA+ + + +V D+ MPV
Sbjct: 826 DRALRVLIADDHPSSRLLLKRQLANLGIAADEAGNGEEALRYLQQD-HYDLVITDLNMPV 884
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
MDGI T+ +R + I G+T+ + ERE + AG+ C KP+T+A+I LL E+
Sbjct: 885 MDGITLTRQVRGFDSKLPIWGLTATAQQHERERCLAAGMTGCLFKPITLAQISRLLAEVS 944
Query: 144 K 144
+
Sbjct: 945 E 945
>gi|346306547|ref|ZP_08848702.1| hypothetical protein HMPREF9457_00411 [Dorea formicigenerans
4_6_53AFAA]
gi|345908250|gb|EGX77907.1| hypothetical protein HMPREF9457_00411 [Dorea formicigenerans
4_6_53AFAA]
Length = 995
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
Query: 22 SKNRPYFA----LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT--GAKFHIV 75
+KNR +A L+V+D+ + R I + I+K +G +V+ AE+G +AV++ + G K+ ++
Sbjct: 862 AKNRKSYAGKKVLLVEDNELNREIATAIMKEIGLEVDTAEDGTDAVNIMSSAEGRKYDLI 921
Query: 76 FIDMEMPVMDGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F+D++MP MDG AT+ +R + I+ +T+ E +R+ ++AG++ KP++
Sbjct: 922 FMDIQMPKMDGYTATREIRTLNNHKCANIPIIAMTANAFEEDRKKAVKAGMNGHIAKPIS 981
Query: 132 MAKIVPLLEEL 142
I+ L+++
Sbjct: 982 ADVILENLDQI 992
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV----DLFRTGAK 71
+ PV + + ALVVDDD S +L+ + + +GKEAV + + +
Sbjct: 716 VKREPVPELKGARALVVDDDAQTCMSVSRMLREIEMTADWTTSGKEAVLRAKEAYEQNQE 775
Query: 72 FHIVFIDMEMPVMDGIEATKAMR-AMKVESKIVGVTSRN-SETEREVFMQAGLDLCYTKP 129
F + ID MP M+GIE + +R + E I+ +T+ + S+ E+E +AG+ +KP
Sbjct: 776 FKVYIIDWLMPDMNGIETVRRIRMVVGKEYPIIILTAYDWSDVEQEA-REAGVTAFVSKP 834
Query: 130 LTMAKIVPLL-----EELQKN 145
L ++++ +L EL KN
Sbjct: 835 LFLSELREVLMSQAQRELLKN 855
>gi|345300120|ref|YP_004829478.1| integral membrane sensor hybrid histidine kinase [Enterobacter
asburiae LF7a]
gi|345094057|gb|AEN65693.1| integral membrane sensor hybrid histidine kinase [Enterobacter
asburiae LF7a]
Length = 948
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
+EGA++ E+ S+N LVVDD P+ RR+ + L S+G++ + A +G +A++
Sbjct: 806 SEGAAALPSP---ESLASENDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALN 862
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDL 124
+ + IV D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D
Sbjct: 863 VL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDS 921
Query: 125 CYTKPLTM 132
C +KP+T+
Sbjct: 922 CLSKPVTL 929
>gi|157373767|ref|YP_001472367.1| histidine kinase [Shewanella sediminis HAW-EB3]
gi|157316141|gb|ABV35239.1| Histidine kinase [Shewanella sediminis HAW-EB3]
Length = 1200
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 71/112 (63%), Gaps = 3/112 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + +++ + +LKS G++V+VAENG+ A+D+ +F V +D++MPVMDG+ A
Sbjct: 1082 LLVEDNFINQQVATELLKSAGYEVDVAENGQIAIDMIEE-KEFDAVLMDIQMPVMDGLTA 1140
Query: 90 TKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
TK +R E I+ +T+ +RE + AG++ TKP+ + ++ L
Sbjct: 1141 TKELRKRYSSTELPIIAMTAHAMSGDREKSLSAGMNAHITKPIVLNELFDTL 1192
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/75 (30%), Positives = 43/75 (57%), Gaps = 3/75 (4%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMPVMDGI 87
LVVDD+P +I+S +++ F+V+ A +G EA+ ++ G + ++ +D MP MDGI
Sbjct: 938 TLVVDDNPTALQIYSSVMQDFHFEVDTAASGSEAI--YKLGRSSVDLLLLDWMMPEMDGI 995
Query: 88 EATKAMRAMKVESKI 102
+ M + ++
Sbjct: 996 AVIDELDRMVADGRL 1010
>gi|300948912|ref|ZP_07162974.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 116-1]
gi|300958903|ref|ZP_07171007.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 175-1]
gi|387612793|ref|YP_006115909.1| two-component system sensor kinase [Escherichia coli ETEC H10407]
gi|425120357|ref|ZP_18522056.1| sensor kinase protein RcsC [Escherichia coli 8.0569]
gi|425273388|ref|ZP_18664800.1| sensor kinase protein RcsC [Escherichia coli TW15901]
gi|300314466|gb|EFJ64250.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 175-1]
gi|300451608|gb|EFK15228.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 116-1]
gi|309702529|emb|CBJ01856.1| two-component system sensor kinase [Escherichia coli ETEC H10407]
gi|408193170|gb|EKI18723.1| sensor kinase protein RcsC [Escherichia coli TW15901]
gi|408569110|gb|EKK45115.1| sensor kinase protein RcsC [Escherichia coli 8.0569]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|251785581|ref|YP_002999885.1| RcsC sensory histidine kinase [Escherichia coli BL21(DE3)]
gi|254162230|ref|YP_003045338.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli B str. REL606]
gi|254288991|ref|YP_003054739.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli BL21(DE3)]
gi|300931436|ref|ZP_07146765.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 187-1]
gi|242377854|emb|CAQ32621.1| RcsC sensory histidine kinase [Escherichia coli BL21(DE3)]
gi|253974131|gb|ACT39802.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli B str. REL606]
gi|253978298|gb|ACT43968.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli BL21(DE3)]
gi|300460806|gb|EFK24299.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 187-1]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|218690381|ref|YP_002398593.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli ED1a]
gi|300981269|ref|ZP_07175446.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 200-1]
gi|422375584|ref|ZP_16455849.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 60-1]
gi|422382199|ref|ZP_16462360.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 57-2]
gi|218427945|emb|CAR08865.2| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli ED1a]
gi|300307633|gb|EFJ62153.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 200-1]
gi|324006600|gb|EGB75819.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 57-2]
gi|324013107|gb|EGB82326.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 60-1]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|26248607|ref|NP_754647.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli CFT073]
gi|227887276|ref|ZP_04005081.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 83972]
gi|312967520|ref|ZP_07781735.1| sensor kinase protein rcsC [Escherichia coli 2362-75]
gi|331647873|ref|ZP_08348965.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli M605]
gi|331658298|ref|ZP_08359260.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli TA206]
gi|386619839|ref|YP_006139419.1| sensory protein [Escherichia coli NA114]
gi|386630015|ref|YP_006149735.1| hybrid sensory kinase in two-component [Escherichia coli str.
'clone D i2']
gi|386634935|ref|YP_006154654.1| hybrid sensory kinase in two-component [Escherichia coli str.
'clone D i14']
gi|386639793|ref|YP_006106591.1| capsular synthesis regulator component C [Escherichia coli ABU
83972]
gi|417286435|ref|ZP_12073724.1| sensor kinase protein RcsC [Escherichia coli TW07793]
gi|419002769|ref|ZP_13550296.1| his Kinase A domain protein [Escherichia coli DEC1B]
gi|419008463|ref|ZP_13555894.1| his Kinase A domain protein [Escherichia coli DEC1C]
gi|419014143|ref|ZP_13561494.1| sensor kinase protein RcsC [Escherichia coli DEC1D]
gi|419019146|ref|ZP_13566453.1| his Kinase A domain protein [Escherichia coli DEC1E]
gi|419024648|ref|ZP_13571874.1| sensor kinase protein RcsC [Escherichia coli DEC2A]
gi|419029688|ref|ZP_13576851.1| his Kinase A domain protein [Escherichia coli DEC2C]
gi|419040374|ref|ZP_13587402.1| his Kinase A domain protein [Escherichia coli DEC2E]
gi|419701054|ref|ZP_14228656.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli SCI-07]
gi|432398046|ref|ZP_19640827.1| sensor kinase RcsC [Escherichia coli KTE25]
gi|432407274|ref|ZP_19649983.1| sensor kinase RcsC [Escherichia coli KTE28]
gi|432412432|ref|ZP_19655095.1| sensor kinase RcsC [Escherichia coli KTE39]
gi|432422566|ref|ZP_19665111.1| sensor kinase RcsC [Escherichia coli KTE178]
gi|432432507|ref|ZP_19674936.1| sensor kinase RcsC [Escherichia coli KTE187]
gi|432436945|ref|ZP_19679333.1| sensor kinase RcsC [Escherichia coli KTE188]
gi|432441715|ref|ZP_19684055.1| sensor kinase RcsC [Escherichia coli KTE189]
gi|432446829|ref|ZP_19689128.1| sensor kinase RcsC [Escherichia coli KTE191]
gi|432457327|ref|ZP_19699511.1| sensor kinase RcsC [Escherichia coli KTE201]
gi|432496328|ref|ZP_19738124.1| sensor kinase RcsC [Escherichia coli KTE214]
gi|432500705|ref|ZP_19742462.1| sensor kinase RcsC [Escherichia coli KTE216]
gi|432505066|ref|ZP_19746790.1| sensor kinase RcsC [Escherichia coli KTE220]
gi|432524417|ref|ZP_19761545.1| sensor kinase RcsC [Escherichia coli KTE230]
gi|432554308|ref|ZP_19791031.1| sensor kinase RcsC [Escherichia coli KTE47]
gi|432559469|ref|ZP_19796138.1| sensor kinase RcsC [Escherichia coli KTE49]
gi|432569299|ref|ZP_19805811.1| sensor kinase RcsC [Escherichia coli KTE53]
gi|432593485|ref|ZP_19829802.1| sensor kinase RcsC [Escherichia coli KTE60]
gi|432608106|ref|ZP_19844291.1| sensor kinase RcsC [Escherichia coli KTE67]
gi|432651792|ref|ZP_19887546.1| sensor kinase RcsC [Escherichia coli KTE87]
gi|432695080|ref|ZP_19930279.1| sensor kinase RcsC [Escherichia coli KTE162]
gi|432711270|ref|ZP_19946330.1| sensor kinase RcsC [Escherichia coli KTE6]
gi|432723670|ref|ZP_19958590.1| sensor kinase RcsC [Escherichia coli KTE17]
gi|432728257|ref|ZP_19963136.1| sensor kinase RcsC [Escherichia coli KTE18]
gi|432741951|ref|ZP_19976670.1| sensor kinase RcsC [Escherichia coli KTE23]
gi|432784185|ref|ZP_20018364.1| sensor kinase RcsC [Escherichia coli KTE63]
gi|432845189|ref|ZP_20078022.1| sensor kinase RcsC [Escherichia coli KTE141]
gi|432895236|ref|ZP_20106956.1| sensor kinase RcsC [Escherichia coli KTE165]
gi|432919683|ref|ZP_20123797.1| sensor kinase RcsC [Escherichia coli KTE173]
gi|432927585|ref|ZP_20129014.1| sensor kinase RcsC [Escherichia coli KTE175]
gi|432981647|ref|ZP_20170422.1| sensor kinase RcsC [Escherichia coli KTE211]
gi|432991258|ref|ZP_20179922.1| sensor kinase RcsC [Escherichia coli KTE217]
gi|432995955|ref|ZP_20184560.1| sensor kinase RcsC [Escherichia coli KTE218]
gi|433000542|ref|ZP_20189067.1| sensor kinase RcsC [Escherichia coli KTE223]
gi|433014484|ref|ZP_20202832.1| sensor kinase RcsC [Escherichia coli KTE104]
gi|433024102|ref|ZP_20212090.1| sensor kinase RcsC [Escherichia coli KTE106]
gi|433058738|ref|ZP_20245784.1| sensor kinase RcsC [Escherichia coli KTE124]
gi|433097089|ref|ZP_20283273.1| sensor kinase RcsC [Escherichia coli KTE139]
gi|433106511|ref|ZP_20292486.1| sensor kinase RcsC [Escherichia coli KTE148]
gi|433111469|ref|ZP_20297334.1| sensor kinase RcsC [Escherichia coli KTE150]
gi|433116153|ref|ZP_20301944.1| sensor kinase RcsC [Escherichia coli KTE153]
gi|433125821|ref|ZP_20311380.1| sensor kinase RcsC [Escherichia coli KTE160]
gi|433139890|ref|ZP_20325146.1| sensor kinase RcsC [Escherichia coli KTE167]
gi|433149807|ref|ZP_20334828.1| sensor kinase RcsC [Escherichia coli KTE174]
gi|433208393|ref|ZP_20392067.1| sensor kinase RcsC [Escherichia coli KTE97]
gi|433213130|ref|ZP_20396720.1| sensor kinase RcsC [Escherichia coli KTE99]
gi|433323692|ref|ZP_20401023.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli J96]
gi|26109012|gb|AAN81215.1|AE016763_174 Sensor protein rcsC [Escherichia coli CFT073]
gi|227835626|gb|EEJ46092.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 83972]
gi|307554285|gb|ADN47060.1| capsular synthesis regulator component C [Escherichia coli ABU
83972]
gi|312287717|gb|EFR15622.1| sensor kinase protein rcsC [Escherichia coli 2362-75]
gi|331043597|gb|EGI15735.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli M605]
gi|331056546|gb|EGI28555.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli TA206]
gi|333970340|gb|AEG37145.1| sensory protein [Escherichia coli NA114]
gi|355420914|gb|AER85111.1| hybrid sensory kinase in two-component [Escherichia coli str.
'clone D i2']
gi|355425834|gb|AER90030.1| hybrid sensory kinase in two-component [Escherichia coli str.
'clone D i14']
gi|377843981|gb|EHU09018.1| his Kinase A domain protein [Escherichia coli DEC1C]
gi|377847648|gb|EHU12646.1| his Kinase A domain protein [Escherichia coli DEC1B]
gi|377857481|gb|EHU22332.1| sensor kinase protein RcsC [Escherichia coli DEC1D]
gi|377860200|gb|EHU25026.1| his Kinase A domain protein [Escherichia coli DEC1E]
gi|377863432|gb|EHU28237.1| sensor kinase protein RcsC [Escherichia coli DEC2A]
gi|377877870|gb|EHU42459.1| his Kinase A domain protein [Escherichia coli DEC2C]
gi|377890414|gb|EHU54871.1| his Kinase A domain protein [Escherichia coli DEC2E]
gi|380347800|gb|EIA36086.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli SCI-07]
gi|386249894|gb|EII96063.1| sensor kinase protein RcsC [Escherichia coli TW07793]
gi|430916150|gb|ELC37228.1| sensor kinase RcsC [Escherichia coli KTE25]
gi|430930033|gb|ELC50542.1| sensor kinase RcsC [Escherichia coli KTE28]
gi|430934839|gb|ELC55186.1| sensor kinase RcsC [Escherichia coli KTE39]
gi|430944178|gb|ELC64277.1| sensor kinase RcsC [Escherichia coli KTE178]
gi|430952932|gb|ELC71846.1| sensor kinase RcsC [Escherichia coli KTE187]
gi|430962276|gb|ELC80133.1| sensor kinase RcsC [Escherichia coli KTE188]
gi|430966169|gb|ELC83577.1| sensor kinase RcsC [Escherichia coli KTE189]
gi|430973102|gb|ELC90070.1| sensor kinase RcsC [Escherichia coli KTE191]
gi|430982061|gb|ELC98780.1| sensor kinase RcsC [Escherichia coli KTE201]
gi|431023586|gb|ELD36781.1| sensor kinase RcsC [Escherichia coli KTE214]
gi|431028282|gb|ELD41326.1| sensor kinase RcsC [Escherichia coli KTE216]
gi|431038160|gb|ELD49129.1| sensor kinase RcsC [Escherichia coli KTE220]
gi|431051533|gb|ELD61196.1| sensor kinase RcsC [Escherichia coli KTE230]
gi|431084113|gb|ELD90284.1| sensor kinase RcsC [Escherichia coli KTE47]
gi|431090689|gb|ELD96440.1| sensor kinase RcsC [Escherichia coli KTE49]
gi|431100013|gb|ELE05029.1| sensor kinase RcsC [Escherichia coli KTE53]
gi|431127585|gb|ELE29885.1| sensor kinase RcsC [Escherichia coli KTE60]
gi|431137992|gb|ELE39832.1| sensor kinase RcsC [Escherichia coli KTE67]
gi|431190239|gb|ELE89639.1| sensor kinase RcsC [Escherichia coli KTE87]
gi|431233662|gb|ELF29249.1| sensor kinase RcsC [Escherichia coli KTE162]
gi|431248950|gb|ELF43125.1| sensor kinase RcsC [Escherichia coli KTE6]
gi|431266224|gb|ELF57786.1| sensor kinase RcsC [Escherichia coli KTE17]
gi|431273946|gb|ELF65020.1| sensor kinase RcsC [Escherichia coli KTE18]
gi|431283642|gb|ELF74501.1| sensor kinase RcsC [Escherichia coli KTE23]
gi|431328608|gb|ELG15912.1| sensor kinase RcsC [Escherichia coli KTE63]
gi|431394611|gb|ELG78144.1| sensor kinase RcsC [Escherichia coli KTE141]
gi|431421603|gb|ELH03815.1| sensor kinase RcsC [Escherichia coli KTE165]
gi|431443727|gb|ELH24753.1| sensor kinase RcsC [Escherichia coli KTE173]
gi|431444108|gb|ELH25132.1| sensor kinase RcsC [Escherichia coli KTE175]
gi|431490956|gb|ELH70563.1| sensor kinase RcsC [Escherichia coli KTE211]
gi|431495340|gb|ELH74926.1| sensor kinase RcsC [Escherichia coli KTE217]
gi|431505515|gb|ELH84121.1| sensor kinase RcsC [Escherichia coli KTE218]
gi|431508528|gb|ELH86800.1| sensor kinase RcsC [Escherichia coli KTE223]
gi|431530582|gb|ELI07261.1| sensor kinase RcsC [Escherichia coli KTE104]
gi|431535795|gb|ELI12134.1| sensor kinase RcsC [Escherichia coli KTE106]
gi|431568993|gb|ELI41955.1| sensor kinase RcsC [Escherichia coli KTE124]
gi|431615437|gb|ELI84566.1| sensor kinase RcsC [Escherichia coli KTE139]
gi|431627218|gb|ELI95629.1| sensor kinase RcsC [Escherichia coli KTE148]
gi|431628773|gb|ELI97149.1| sensor kinase RcsC [Escherichia coli KTE150]
gi|431633915|gb|ELJ02177.1| sensor kinase RcsC [Escherichia coli KTE153]
gi|431645055|gb|ELJ12708.1| sensor kinase RcsC [Escherichia coli KTE160]
gi|431660203|gb|ELJ27091.1| sensor kinase RcsC [Escherichia coli KTE167]
gi|431670476|gb|ELJ36829.1| sensor kinase RcsC [Escherichia coli KTE174]
gi|431729678|gb|ELJ93297.1| sensor kinase RcsC [Escherichia coli KTE97]
gi|431734155|gb|ELJ97556.1| sensor kinase RcsC [Escherichia coli KTE99]
gi|432347790|gb|ELL42247.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli J96]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|402844463|ref|ZP_10892821.1| putative hybrid sensory histidine kinase in two-component
regulatory system with EvgA [Klebsiella sp. OBRC7]
gi|402274572|gb|EJU23752.1| putative hybrid sensory histidine kinase in two-component
regulatory system with EvgA [Klebsiella sp. OBRC7]
Length = 1059
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 1/121 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
+R L+ DD P R + L ++G + A NG+EA+ + + +V D+ MPV
Sbjct: 826 DRALRVLIADDHPSSRLLLKRQLANLGIAADEAGNGEEALRYLQQD-HYDLVITDLNMPV 884
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
MDGI T+ +R + I G+T+ + ERE + AG+ C KP+T+A+I LL E+
Sbjct: 885 MDGITLTRQVRGFDSKLPIWGLTATAQQHERERCLAAGMTGCLFKPITLAQISRLLAEVS 944
Query: 144 K 144
+
Sbjct: 945 E 945
>gi|389743515|gb|EIM84699.1| hypothetical protein STEHIDRAFT_81369 [Stereum hirsutum FP-91666 SS1]
Length = 1103
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 74/132 (56%), Gaps = 9/132 (6%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
AS+ + + IS + + L+ +D+ + +R+ + IL+ G VE+AENG AVD F+
Sbjct: 945 ASALESSTISPAATKGDTTFDILLAEDNEVNQRLATQILQKYGHSVEIAENGSVAVDKFK 1004
Query: 68 TGAK----FHIVFIDMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFM 118
T + F I+ +D+ MP M G+EAT+ +RA + + IV +T+ +RE +
Sbjct: 1005 TRTQRCQPFDIILMDVSMPFMGGMEATELIRAYERHNSLARTPIVALTAHAMIGDRERCL 1064
Query: 119 QAGLDLCYTKPL 130
+ G+D TKPL
Sbjct: 1065 KGGMDDHITKPL 1076
>gi|417618814|ref|ZP_12269228.1| sensor kinase protein rcsC [Escherichia coli G58-1]
gi|345375528|gb|EGX07475.1| sensor kinase protein rcsC [Escherichia coli G58-1]
Length = 926
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 792 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 850
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 851 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 906
>gi|417744096|ref|ZP_12392622.1| his Kinase A domain protein [Shigella flexneri 2930-71]
gi|332766037|gb|EGJ96247.1| his Kinase A domain protein [Shigella flexneri 2930-71]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|417734105|ref|ZP_12382756.1| sensor kinase protein rcsC [Shigella flexneri 2747-71]
gi|332756179|gb|EGJ86530.1| sensor kinase protein rcsC [Shigella flexneri 2747-71]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417671526|ref|ZP_12321015.1| sensor kinase protein rcsC [Shigella dysenteriae 155-74]
gi|332096152|gb|EGJ01155.1| sensor kinase protein rcsC [Shigella dysenteriae 155-74]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|330828385|ref|YP_004391337.1| two component system hybrid sensor histidine kinase/response
regulator [Aeromonas veronii B565]
gi|423210927|ref|ZP_17197480.1| hypothetical protein HMPREF1169_02998 [Aeromonas veronii AER397]
gi|328803521|gb|AEB48720.1| Two-component system hybrid sensor histidine kinase/response
regulator [Aeromonas veronii B565]
gi|404614322|gb|EKB11323.1| hypothetical protein HMPREF1169_02998 [Aeromonas veronii AER397]
Length = 905
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 8 ASSSKKARISENPVSKN-RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
+ S + ++ P + +P L VDD+ ++ + +LK + +V V +NGKEAV
Sbjct: 645 SPESSRQKLPAQPAPRQLQPIKVLAVDDNAANLKLIAAMLKEMVSQVVVCKNGKEAVKQA 704
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDL 124
++ F I+F+D++MP+MDGI AT+A+R ++ + IV VT+ ERE ++ G+D
Sbjct: 705 QS-QPFDIIFMDIQMPIMDGISATQAIRNQSLNTTTPIVAVTAHAIPGERERLIRQGMDD 763
Query: 125 CYTKPLTMAKIVPLLEEL 142
KP+ + + L+ +
Sbjct: 764 YLAKPIDESMLAQLITDF 781
>gi|239905559|ref|YP_002952298.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
gi|239795423|dbj|BAH74412.1| putative two-component hybrid sensor and regulator [Desulfovibrio
magneticus RS-1]
Length = 2025
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 72/115 (62%), Gaps = 6/115 (5%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L+V+DD + +R +L+ G+ V VA +G +A+++ R AKF V +D++MPV+D
Sbjct: 1897 PCHVLLVEDDSISQRSIQRLLEKAGYHVTVAGDGSQALEILRR-AKFDCVLMDVQMPVLD 1955
Query: 86 GIEATKAMR-----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
G+ ATK +R A+ IV +T+ ++++F++AG+D +KP+++ K+
Sbjct: 1956 GVTATKRIRSDVSGAVDRTIPIVALTAFAMSGDQDIFLKAGMDGYLSKPVSLEKM 2010
>gi|442592179|ref|ZP_21010159.1| Two-component sensor protein RcsC [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441608332|emb|CCP99185.1| Two-component sensor protein RcsC [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|428216021|ref|YP_007089165.1| PAS domain-containing protein [Oscillatoria acuminata PCC 6304]
gi|428004402|gb|AFY85245.1| PAS domain S-box [Oscillatoria acuminata PCC 6304]
Length = 1305
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/105 (38%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVVDD P RR+ L+ +GF+V AENG++A++++ H++ +DM+MPVM+G
Sbjct: 1094 YRILVVDDRPESRRLIRCYLEPLGFEVREAENGQQALEVWENWEP-HLIVMDMQMPVMNG 1152
Query: 87 IEATKAMRA-MKVESKIV-GVTSRNSETEREVFMQAGLDLCYTKP 129
EAT+ +R+ +K ++ +V +T+ E R + + AG D KP
Sbjct: 1153 YEATRQIRSHLKGQATVVIALTASAFEENRSLILSAGCDEFLRKP 1197
>gi|30063657|ref|NP_837828.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Shigella flexneri 2a str. 2457T]
gi|384543882|ref|YP_005727945.1| Integral membrane sensor hybrid histidine kinase precursor
[Shigella flexneri 2002017]
gi|415853357|ref|ZP_11529366.1| sensor kinase protein rcsC [Shigella flexneri 2a str. 2457T]
gi|417723772|ref|ZP_12372577.1| sensor kinase protein rcsC [Shigella flexneri K-304]
gi|418257186|ref|ZP_12880870.1| his Kinase A domain protein [Shigella flexneri 6603-63]
gi|420340924|ref|ZP_14842433.1| sensor kinase protein RcsC [Shigella flexneri K-404]
gi|30041910|gb|AAP17637.1| sensor for ctr capsule biosynthesis, probable histidine kinase
acting on RcsB [Shigella flexneri 2a str. 2457T]
gi|281601668|gb|ADA74652.1| Integral membrane sensor hybrid histidine kinase precursor
[Shigella flexneri 2002017]
gi|313651334|gb|EFS15732.1| sensor kinase protein rcsC [Shigella flexneri 2a str. 2457T]
gi|333016630|gb|EGK35959.1| sensor kinase protein rcsC [Shigella flexneri K-304]
gi|391271454|gb|EIQ30328.1| sensor kinase protein RcsC [Shigella flexneri K-404]
gi|397897339|gb|EJL13748.1| his Kinase A domain protein [Shigella flexneri 6603-63]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|421683282|ref|ZP_16123078.1| his Kinase A domain protein [Shigella flexneri 1485-80]
gi|404339136|gb|EJZ65576.1| his Kinase A domain protein [Shigella flexneri 1485-80]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417613689|ref|ZP_12264147.1| sensor kinase protein rcsC [Escherichia coli STEC_EH250]
gi|345361883|gb|EGW94040.1| sensor kinase protein rcsC [Escherichia coli STEC_EH250]
Length = 929
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 795 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 853
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 854 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 909
>gi|432661456|ref|ZP_19897100.1| sensor kinase RcsC [Escherichia coli KTE111]
gi|431199193|gb|ELE97946.1| sensor kinase RcsC [Escherichia coli KTE111]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|432392731|ref|ZP_19635561.1| sensor kinase RcsC [Escherichia coli KTE21]
gi|430917887|gb|ELC38926.1| sensor kinase RcsC [Escherichia coli KTE21]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|309786603|ref|ZP_07681224.1| sensor kinase protein rcsC [Shigella dysenteriae 1617]
gi|81240324|gb|ABB61034.1| sensor for ctr capsule biosynthesis [Shigella dysenteriae Sd197]
gi|308925512|gb|EFP70998.1| sensor kinase protein rcsC [Shigella dysenteriae 1617]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|417138890|ref|ZP_11982417.1| sensor kinase protein RcsC [Escherichia coli 97.0259]
gi|386157535|gb|EIH13875.1| sensor kinase protein RcsC [Escherichia coli 97.0259]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|417597541|ref|ZP_12248182.1| sensor kinase protein rcsC [Escherichia coli 3030-1]
gi|345353529|gb|EGW85761.1| sensor kinase protein rcsC [Escherichia coli 3030-1]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|417828611|ref|ZP_12475164.1| his Kinase A domain protein [Shigella flexneri J1713]
gi|418041873|ref|ZP_12680087.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli W26]
gi|335574987|gb|EGM61299.1| his Kinase A domain protein [Shigella flexneri J1713]
gi|383475276|gb|EID67241.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli W26]
Length = 926
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 792 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 850
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 851 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 906
>gi|417729141|ref|ZP_12377839.1| sensor kinase protein rcsC [Shigella flexneri K-671]
gi|332755266|gb|EGJ85630.1| sensor kinase protein rcsC [Shigella flexneri K-671]
Length = 880
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 746 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 804
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 805 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 860
>gi|417702861|ref|ZP_12351972.1| sensor kinase protein rcsC [Shigella flexneri K-218]
gi|417739053|ref|ZP_12387633.1| sensor kinase protein rcsC [Shigella flexneri 4343-70]
gi|332754864|gb|EGJ85229.1| sensor kinase protein rcsC [Shigella flexneri 4343-70]
gi|333001721|gb|EGK21287.1| sensor kinase protein rcsC [Shigella flexneri K-218]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|260856206|ref|YP_003230097.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. 11368]
gi|415793620|ref|ZP_11496237.1| sensor kinase protein rcsC [Escherichia coli EPECa14]
gi|425380273|ref|ZP_18764313.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
EC1865]
gi|257754855|dbj|BAI26357.1| hybrid sensory kinase RcsC in two-component regulatory system with
RcsB and YojN [Escherichia coli O26:H11 str. 11368]
gi|323152279|gb|EFZ38569.1| sensor kinase protein rcsC [Escherichia coli EPECa14]
gi|408296640|gb|EKJ14866.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
EC1865]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|449545055|gb|EMD36027.1| histidine kinase [Ceriporiopsis subvermispora B]
Length = 1435
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK---- 71
++EN + PY L+ +D+ + +++ IL+ G ++E+AENG AVD F+ +
Sbjct: 1270 VAENDI----PYEILIAEDNLVNQKLAVKILEKHGHQIEIAENGSLAVDAFKARIQRNRP 1325
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCY 126
F ++ +D+ MP M G+EAT+ +RA + I+ +T+ +RE +QAG+D
Sbjct: 1326 FDVILMDVSMPFMGGMEATELIRAYETAHGLDPVPIIALTAHAMIGDRERCLQAGMDDHI 1385
Query: 127 TKPLTMAKIVPLLEELQK 144
TKPL + ++ + +L K
Sbjct: 1386 TKPLRRSDLINTINKLAK 1403
>gi|325981380|ref|YP_004293782.1| multi-sensor hybrid histidine kinase [Nitrosomonas sp. AL212]
gi|325530899|gb|ADZ25620.1| multi-sensor hybrid histidine kinase [Nitrosomonas sp. AL212]
Length = 916
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 18 ENPVS--KNRPYF--------ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
+NPV+ +N P+ L+ +D+P+ + + +L +G +A +GK+AVDL R
Sbjct: 641 DNPVAPIQNPPFILDYNLHGSVLLAEDNPVNQEVAKAMLSRLGLNTVIAHDGKQAVDLIR 700
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYT 127
+ I+ +D +MPVMDG EAT +R + I+ +T+ +E +R + AG+D +
Sbjct: 701 N-HHYDIILMDCQMPVMDGFEATAQIRQHLNKIPIIALTANATEDDRTQCLNAGMDDFLS 759
Query: 128 KPLTMAKI 135
KP T+ ++
Sbjct: 760 KPYTLDQL 767
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 27/119 (22%), Positives = 57/119 (47%), Gaps = 6/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK----FHIVFIDMEMPVMD 85
LVVDD+ R I + L++ + + A+ +H+V +DM MP MD
Sbjct: 517 LVVDDNQTNREILRLQLQNWKIQAVCTHSADHALFAMTKACNINEPYHLVILDMHMPKMD 576
Query: 86 GIEATKAMRAMKV--ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
G++ K + A +++I+ +TS + + + AG+ KP+ +++ ++ ++
Sbjct: 577 GLQLAKKIHADPTLNKTRIMMLTSTHHDVTQLAKDNAGILRYVNKPVRQKELIDIIMDV 635
>gi|440717070|ref|ZP_20897569.1| protein containing ATP-binding region, ATPase-like protein
[Rhodopirellula baltica SWK14]
gi|436437896|gb|ELP31490.1| protein containing ATP-binding region, ATPase-like protein
[Rhodopirellula baltica SWK14]
Length = 1976
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 47/114 (41%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF-HIVFIDMEMPVMDGIE 88
LVVDD RR+ S++L+ G +V++ NG+EAVD R+ IV +DM+MPVMDG
Sbjct: 1674 LVVDDCETNRRLLSLLLQDAGAEVDIRCNGREAVDALRSDPSMVDIVLMDMQMPVMDGYT 1733
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREV-FMQAGLDLCYTKPLTMAKIVPLLEE 141
AT A+RA + IV +T+ N+ T EV +AG TKPL + ++ + E
Sbjct: 1734 ATSALRAQGFQVPIVALTA-NAMTGDEVRCREAGCTDYQTKPLDLNALLQCVAE 1786
>gi|433198854|ref|ZP_20382756.1| sensor kinase RcsC [Escherichia coli KTE94]
gi|431721558|gb|ELJ85552.1| sensor kinase RcsC [Escherichia coli KTE94]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|432974367|ref|ZP_20163206.1| sensor kinase RcsC [Escherichia coli KTE209]
gi|433087899|ref|ZP_20274270.1| sensor kinase RcsC [Escherichia coli KTE137]
gi|431489228|gb|ELH68856.1| sensor kinase RcsC [Escherichia coli KTE209]
gi|431604410|gb|ELI73819.1| sensor kinase RcsC [Escherichia coli KTE137]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417713254|ref|ZP_12362221.1| sensor kinase protein rcsC [Shigella flexneri K-272]
gi|333002945|gb|EGK22501.1| sensor kinase protein rcsC [Shigella flexneri K-272]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|145698285|ref|NP_416722.2| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli str. K-12 substr. MG1655]
gi|170081838|ref|YP_001731158.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli str. K-12 substr. DH10B]
gi|238901393|ref|YP_002927189.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli BW2952]
gi|301024240|ref|ZP_07187935.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 196-1]
gi|386281288|ref|ZP_10058950.1| sensor kinase RcsC [Escherichia sp. 4_1_40B]
gi|386594999|ref|YP_006091399.1| histidine kinase [Escherichia coli DH1]
gi|386614831|ref|YP_006134497.1| sensor kinase RcsC [Escherichia coli UMNK88]
gi|404375569|ref|ZP_10980753.1| sensor kinase RcsC [Escherichia sp. 1_1_43]
gi|417259922|ref|ZP_12047445.1| sensor kinase protein RcsC [Escherichia coli 2.3916]
gi|417271117|ref|ZP_12058466.1| sensor kinase protein RcsC [Escherichia coli 2.4168]
gi|417277581|ref|ZP_12064904.1| sensor kinase protein RcsC [Escherichia coli 3.2303]
gi|417635151|ref|ZP_12285364.1| sensor kinase protein rcsC [Escherichia coli STEC_S1191]
gi|417947040|ref|ZP_12590243.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli XH140A]
gi|417975469|ref|ZP_12616268.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli XH001]
gi|418303614|ref|ZP_12915408.1| sensor kinase protein rcsC [Escherichia coli UMNF18]
gi|419143159|ref|ZP_13687897.1| sensor kinase protein RcsC [Escherichia coli DEC6A]
gi|419149155|ref|ZP_13693808.1| his Kinase A domain protein [Escherichia coli DEC6B]
gi|419154621|ref|ZP_13699184.1| sensor kinase protein RcsC [Escherichia coli DEC6C]
gi|419159895|ref|ZP_13704400.1| sensor kinase protein RcsC [Escherichia coli DEC6D]
gi|419165023|ref|ZP_13709480.1| his Kinase A domain protein [Escherichia coli DEC6E]
gi|419938873|ref|ZP_14455681.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 75]
gi|421778127|ref|ZP_16214710.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli AD30]
gi|422766828|ref|ZP_16820555.1| RcsC Alpha-Beta-Loop [Escherichia coli E1520]
gi|422771935|ref|ZP_16825624.1| RcsC Alpha-Beta-Loop [Escherichia coli E482]
gi|422819605|ref|ZP_16867816.1| sensor kinase RcsC [Escherichia coli M919]
gi|425115632|ref|ZP_18517433.1| sensor kinase protein RcsC [Escherichia coli 8.0566]
gi|425283932|ref|ZP_18674971.1| sensor kinase protein RcsC [Escherichia coli TW00353]
gi|432417692|ref|ZP_19660296.1| sensor kinase RcsC [Escherichia coli KTE44]
gi|432534493|ref|ZP_19771468.1| sensor kinase RcsC [Escherichia coli KTE234]
gi|432564472|ref|ZP_19801054.1| sensor kinase RcsC [Escherichia coli KTE51]
gi|432576497|ref|ZP_19812957.1| sensor kinase RcsC [Escherichia coli KTE56]
gi|432627870|ref|ZP_19863846.1| sensor kinase RcsC [Escherichia coli KTE77]
gi|432686052|ref|ZP_19921349.1| sensor kinase RcsC [Escherichia coli KTE156]
gi|432692192|ref|ZP_19927420.1| sensor kinase RcsC [Escherichia coli KTE161]
gi|432737733|ref|ZP_19972491.1| sensor kinase RcsC [Escherichia coli KTE42]
gi|432875857|ref|ZP_20094017.1| sensor kinase RcsC [Escherichia coli KTE154]
gi|432955738|ref|ZP_20147616.1| sensor kinase RcsC [Escherichia coli KTE197]
gi|433048597|ref|ZP_20235950.1| sensor kinase RcsC [Escherichia coli KTE120]
gi|450245756|ref|ZP_21900713.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli S17]
gi|17433741|sp|P14376.3|RCSC_ECOLI RecName: Full=Sensor kinase protein RcsC; AltName: Full=Capsular
synthesis regulator component C
gi|145693157|gb|AAC75278.2| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli str. K-12 substr. MG1655]
gi|169889673|gb|ACB03380.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli str. K-12 substr. DH10B]
gi|238861443|gb|ACR63441.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli BW2952]
gi|260448688|gb|ACX39110.1| histidine kinase [Escherichia coli DH1]
gi|299880503|gb|EFI88714.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 196-1]
gi|323936833|gb|EGB33118.1| RcsC Alpha-Beta-Loop [Escherichia coli E1520]
gi|323941087|gb|EGB37274.1| RcsC Alpha-Beta-Loop [Escherichia coli E482]
gi|332344000|gb|AEE57334.1| sensor kinase RcsC [Escherichia coli UMNK88]
gi|339415712|gb|AEJ57384.1| sensor kinase protein rcsC [Escherichia coli UMNF18]
gi|342361226|gb|EGU25370.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli XH140A]
gi|344195034|gb|EGV49105.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli XH001]
gi|345387434|gb|EGX17256.1| sensor kinase protein rcsC [Escherichia coli STEC_S1191]
gi|359332562|dbj|BAL39009.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli str. K-12 substr. MDS42]
gi|377992277|gb|EHV55424.1| his Kinase A domain protein [Escherichia coli DEC6B]
gi|377993672|gb|EHV56803.1| sensor kinase protein RcsC [Escherichia coli DEC6A]
gi|377997203|gb|EHV60310.1| sensor kinase protein RcsC [Escherichia coli DEC6C]
gi|378007239|gb|EHV70208.1| sensor kinase protein RcsC [Escherichia coli DEC6D]
gi|378011105|gb|EHV74050.1| his Kinase A domain protein [Escherichia coli DEC6E]
gi|385537018|gb|EIF83903.1| sensor kinase RcsC [Escherichia coli M919]
gi|386121427|gb|EIG70042.1| sensor kinase RcsC [Escherichia sp. 4_1_40B]
gi|386226645|gb|EII48947.1| sensor kinase protein RcsC [Escherichia coli 2.3916]
gi|386234817|gb|EII66793.1| sensor kinase protein RcsC [Escherichia coli 2.4168]
gi|386239649|gb|EII76576.1| sensor kinase protein RcsC [Escherichia coli 3.2303]
gi|388409251|gb|EIL69558.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 75]
gi|404291051|gb|EJZ47949.1| sensor kinase RcsC [Escherichia sp. 1_1_43]
gi|408201622|gb|EKI26771.1| sensor kinase protein RcsC [Escherichia coli TW00353]
gi|408456800|gb|EKJ80608.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli AD30]
gi|408568119|gb|EKK44157.1| sensor kinase protein RcsC [Escherichia coli 8.0566]
gi|430938936|gb|ELC59159.1| sensor kinase RcsC [Escherichia coli KTE44]
gi|431060129|gb|ELD69463.1| sensor kinase RcsC [Escherichia coli KTE234]
gi|431093258|gb|ELD98926.1| sensor kinase RcsC [Escherichia coli KTE51]
gi|431114532|gb|ELE18060.1| sensor kinase RcsC [Escherichia coli KTE56]
gi|431162481|gb|ELE62922.1| sensor kinase RcsC [Escherichia coli KTE77]
gi|431221834|gb|ELF19131.1| sensor kinase RcsC [Escherichia coli KTE156]
gi|431226540|gb|ELF23699.1| sensor kinase RcsC [Escherichia coli KTE161]
gi|431282193|gb|ELF73078.1| sensor kinase RcsC [Escherichia coli KTE42]
gi|431420129|gb|ELH02461.1| sensor kinase RcsC [Escherichia coli KTE154]
gi|431467124|gb|ELH47135.1| sensor kinase RcsC [Escherichia coli KTE197]
gi|431564368|gb|ELI37542.1| sensor kinase RcsC [Escherichia coli KTE120]
gi|449320011|gb|EMD10051.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli S17]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|398848981|ref|ZP_10605764.1| signal transduction histidine kinase [Pseudomonas sp. GM84]
gi|398245944|gb|EJN31446.1| signal transduction histidine kinase [Pseudomonas sp. GM84]
Length = 1091
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 6/122 (4%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+ +P ++RP LVVDD P + L ++G +V +AE+G+ + L++ A F +V
Sbjct: 836 VPPHPERESRPLNILVVDDYPANLLLLEKQLNTLGHRVTLAEHGEAGLALWQAAA-FDLV 894
Query: 76 FIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
D MPVMDG E T+ +R ++ E +I+GVT+ ERE + +G+D C KP+
Sbjct: 895 ITDCSMPVMDGHELTRRIRQLEHEKGGSGCRILGVTANAQAEERERCLASGMDDCLFKPI 954
Query: 131 TM 132
+
Sbjct: 955 GL 956
>gi|417291347|ref|ZP_12078628.1| sensor kinase protein RcsC [Escherichia coli B41]
gi|386253669|gb|EIJ03359.1| sensor kinase protein RcsC [Escherichia coli B41]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|419809949|ref|ZP_14334832.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O32:H37 str. P4]
gi|385157033|gb|EIF19026.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O32:H37 str. P4]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417308685|ref|ZP_12095527.1| Sensor kinase protein RcsC [Escherichia coli PCN033]
gi|338769718|gb|EGP24496.1| Sensor kinase protein RcsC [Escherichia coli PCN033]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|416335407|ref|ZP_11672100.1| Two-component sensor protein RcsC [Escherichia coli WV_060327]
gi|320196090|gb|EFW70714.1| Two-component sensor protein RcsC [Escherichia coli WV_060327]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|312973528|ref|ZP_07787700.1| sensor kinase protein rcsC [Escherichia coli 1827-70]
gi|310332123|gb|EFP99358.1| sensor kinase protein rcsC [Escherichia coli 1827-70]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|218705748|ref|YP_002413267.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli UMN026]
gi|300897715|ref|ZP_07116112.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 198-1]
gi|218432845|emb|CAR13739.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli UMN026]
gi|300358555|gb|EFJ74425.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 198-1]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|218700687|ref|YP_002408316.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli IAI39]
gi|218370673|emb|CAR18482.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli IAI39]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|209919677|ref|YP_002293761.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli SE11]
gi|209912936|dbj|BAG78010.1| two-component sensor kinase [Escherichia coli SE11]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|194436320|ref|ZP_03068422.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
101-1]
gi|253772858|ref|YP_003035689.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|422786835|ref|ZP_16839574.1| RcsC Alpha-Beta-Loop [Escherichia coli H489]
gi|422790527|ref|ZP_16843231.1| RcsC Alpha-Beta-Loop [Escherichia coli TA007]
gi|194425048|gb|EDX41033.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
101-1]
gi|253323902|gb|ACT28504.1| histidine kinase [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|323961524|gb|EGB57132.1| RcsC Alpha-Beta-Loop [Escherichia coli H489]
gi|323973081|gb|EGB68275.1| RcsC Alpha-Beta-Loop [Escherichia coli TA007]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|194433290|ref|ZP_03065570.1| sensor histidine kinase/response regulator RcsC [Shigella
dysenteriae 1012]
gi|194418384|gb|EDX34473.1| sensor histidine kinase/response regulator RcsC [Shigella
dysenteriae 1012]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|188533372|ref|YP_001907169.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Erwinia tasmaniensis Et1/99]
gi|188028414|emb|CAO96275.1| Sensor kinase protein (Capsular synthesis regulator component C)
[Erwinia tasmaniensis Et1/99]
Length = 951
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 39/116 (33%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N LVVDD P+ R + S L S+G++V+ A++G +A+++ + IV D+ MP
Sbjct: 823 NDDILILVVDDHPINRMLLSDQLGSLGYRVKTAQDGVDALNVISRN-EIDIVLTDVNMPN 881
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
MDG T+ +R + ++GVT+ E++ ++AG+D C +KP+TM + +L
Sbjct: 882 MDGYRLTQRLRELGQTFPVIGVTANALAEEKQRCIEAGMDNCLSKPVTMETLQQVL 937
>gi|110806192|ref|YP_689712.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Shigella flexneri 5 str. 8401]
gi|110615740|gb|ABF04407.1| Sensor protein rcsC [Shigella flexneri 5 str. 8401]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|110642428|ref|YP_670158.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 536]
gi|191170203|ref|ZP_03031757.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
F11]
gi|306814668|ref|ZP_07448830.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli NC101]
gi|432381959|ref|ZP_19624902.1| sensor kinase RcsC [Escherichia coli KTE15]
gi|432387771|ref|ZP_19630660.1| sensor kinase RcsC [Escherichia coli KTE16]
gi|432466379|ref|ZP_19708467.1| sensor kinase RcsC [Escherichia coli KTE205]
gi|432471586|ref|ZP_19713632.1| sensor kinase RcsC [Escherichia coli KTE206]
gi|432514521|ref|ZP_19751745.1| sensor kinase RcsC [Escherichia coli KTE224]
gi|432584474|ref|ZP_19820868.1| sensor kinase RcsC [Escherichia coli KTE57]
gi|432612029|ref|ZP_19848191.1| sensor kinase RcsC [Escherichia coli KTE72]
gi|432646791|ref|ZP_19882581.1| sensor kinase RcsC [Escherichia coli KTE86]
gi|432656373|ref|ZP_19892077.1| sensor kinase RcsC [Escherichia coli KTE93]
gi|432699650|ref|ZP_19934804.1| sensor kinase RcsC [Escherichia coli KTE169]
gi|432713998|ref|ZP_19949038.1| sensor kinase RcsC [Escherichia coli KTE8]
gi|432732953|ref|ZP_19967786.1| sensor kinase RcsC [Escherichia coli KTE45]
gi|432746262|ref|ZP_19980928.1| sensor kinase RcsC [Escherichia coli KTE43]
gi|432760039|ref|ZP_19994533.1| sensor kinase RcsC [Escherichia coli KTE46]
gi|432905478|ref|ZP_20114345.1| sensor kinase RcsC [Escherichia coli KTE194]
gi|432938571|ref|ZP_20136849.1| sensor kinase RcsC [Escherichia coli KTE183]
gi|432972422|ref|ZP_20161289.1| sensor kinase RcsC [Escherichia coli KTE207]
gi|432985978|ref|ZP_20174701.1| sensor kinase RcsC [Escherichia coli KTE215]
gi|433039219|ref|ZP_20226818.1| sensor kinase RcsC [Escherichia coli KTE113]
gi|433073419|ref|ZP_20260073.1| sensor kinase RcsC [Escherichia coli KTE129]
gi|433078396|ref|ZP_20264934.1| sensor kinase RcsC [Escherichia coli KTE131]
gi|433083177|ref|ZP_20269634.1| sensor kinase RcsC [Escherichia coli KTE133]
gi|433101765|ref|ZP_20287851.1| sensor kinase RcsC [Escherichia coli KTE145]
gi|433120816|ref|ZP_20306488.1| sensor kinase RcsC [Escherichia coli KTE157]
gi|433144809|ref|ZP_20329953.1| sensor kinase RcsC [Escherichia coli KTE168]
gi|433183891|ref|ZP_20368141.1| sensor kinase RcsC [Escherichia coli KTE85]
gi|433189003|ref|ZP_20373101.1| sensor kinase RcsC [Escherichia coli KTE88]
gi|110344020|gb|ABG70257.1| sensor protein RcsC [Escherichia coli 536]
gi|190909719|gb|EDV69304.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
F11]
gi|305852062|gb|EFM52514.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli NC101]
gi|430906419|gb|ELC28019.1| sensor kinase RcsC [Escherichia coli KTE16]
gi|430907434|gb|ELC28932.1| sensor kinase RcsC [Escherichia coli KTE15]
gi|430993185|gb|ELD09539.1| sensor kinase RcsC [Escherichia coli KTE205]
gi|430997975|gb|ELD14224.1| sensor kinase RcsC [Escherichia coli KTE206]
gi|431041917|gb|ELD52412.1| sensor kinase RcsC [Escherichia coli KTE224]
gi|431115833|gb|ELE19327.1| sensor kinase RcsC [Escherichia coli KTE57]
gi|431148203|gb|ELE49494.1| sensor kinase RcsC [Escherichia coli KTE72]
gi|431180828|gb|ELE80715.1| sensor kinase RcsC [Escherichia coli KTE86]
gi|431190843|gb|ELE90229.1| sensor kinase RcsC [Escherichia coli KTE93]
gi|431243399|gb|ELF37786.1| sensor kinase RcsC [Escherichia coli KTE169]
gi|431256775|gb|ELF49710.1| sensor kinase RcsC [Escherichia coli KTE8]
gi|431276140|gb|ELF67167.1| sensor kinase RcsC [Escherichia coli KTE45]
gi|431291301|gb|ELF81814.1| sensor kinase RcsC [Escherichia coli KTE43]
gi|431307693|gb|ELF95983.1| sensor kinase RcsC [Escherichia coli KTE46]
gi|431432713|gb|ELH14390.1| sensor kinase RcsC [Escherichia coli KTE194]
gi|431463306|gb|ELH43499.1| sensor kinase RcsC [Escherichia coli KTE183]
gi|431481924|gb|ELH61631.1| sensor kinase RcsC [Escherichia coli KTE207]
gi|431500215|gb|ELH79231.1| sensor kinase RcsC [Escherichia coli KTE215]
gi|431551319|gb|ELI25305.1| sensor kinase RcsC [Escherichia coli KTE113]
gi|431587693|gb|ELI59045.1| sensor kinase RcsC [Escherichia coli KTE129]
gi|431596626|gb|ELI66578.1| sensor kinase RcsC [Escherichia coli KTE131]
gi|431602069|gb|ELI71578.1| sensor kinase RcsC [Escherichia coli KTE133]
gi|431619359|gb|ELI88283.1| sensor kinase RcsC [Escherichia coli KTE145]
gi|431642417|gb|ELJ10140.1| sensor kinase RcsC [Escherichia coli KTE157]
gi|431661504|gb|ELJ28317.1| sensor kinase RcsC [Escherichia coli KTE168]
gi|431705709|gb|ELJ70299.1| sensor kinase RcsC [Escherichia coli KTE88]
gi|431706141|gb|ELJ70715.1| sensor kinase RcsC [Escherichia coli KTE85]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|255085834|ref|XP_002505348.1| predicted protein [Micromonas sp. RCC299]
gi|226520617|gb|ACO66606.1| predicted protein [Micromonas sp. RCC299]
Length = 114
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDDD ++R + + +L+ + A +G EAVD +G +F +V +D+ MPVMDG+EA
Sbjct: 3 LLVDDDRLVRMVLAALLRRMDAICVTASDGAEAVDKCASG-EFDLVIMDLRMPVMDGLEA 61
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+ +R M + IVG+T+ + FM++G + KP++ + LL
Sbjct: 62 TRRIREMDADVPIVGLTANTMPEDTARFMRSGANEVIYKPISADNVEKLL 111
>gi|419132238|ref|ZP_13677075.1| his Kinase A domain protein [Escherichia coli DEC5D]
gi|420270633|ref|ZP_14772991.1| response regulator [Escherichia coli PA22]
gi|420276238|ref|ZP_14778522.1| response regulator [Escherichia coli PA40]
gi|420299051|ref|ZP_14801100.1| response regulator [Escherichia coli TW09109]
gi|424078254|ref|ZP_17815258.1| response regulator [Escherichia coli FDA505]
gi|424116560|ref|ZP_17850424.1| response regulator [Escherichia coli PA3]
gi|424135166|ref|ZP_17867652.1| response regulator [Escherichia coli PA10]
gi|424469405|ref|ZP_17919251.1| response regulator [Escherichia coli PA41]
gi|424533090|ref|ZP_17976455.1| response regulator [Escherichia coli EC4422]
gi|424557614|ref|ZP_17999051.1| response regulator [Escherichia coli EC4436]
gi|424570087|ref|ZP_18010672.1| response regulator [Escherichia coli EC4448]
gi|424576250|ref|ZP_18016353.1| response regulator [Escherichia coli EC1845]
gi|424582093|ref|ZP_18021762.1| response regulator [Escherichia coli EC1863]
gi|425098813|ref|ZP_18501565.1| sensor kinase protein RcsC [Escherichia coli 3.4870]
gi|425144890|ref|ZP_18544899.1| sensor kinase protein RcsC [Escherichia coli 10.0869]
gi|425156815|ref|ZP_18556096.1| response regulator [Escherichia coli PA34]
gi|425175053|ref|ZP_18573183.1| response regulator [Escherichia coli FDA504]
gi|425187350|ref|ZP_18584633.1| response regulator [Escherichia coli FRIK1997]
gi|425206977|ref|ZP_18602789.1| response regulator [Escherichia coli FRIK2001]
gi|425330482|ref|ZP_18718371.1| response regulator [Escherichia coli EC1846]
gi|425343054|ref|ZP_18729971.1| response regulator [Escherichia coli EC1848]
gi|428959875|ref|ZP_19031209.1| sensor kinase protein RcsC [Escherichia coli 89.0511]
gi|429027286|ref|ZP_19093319.1| sensor kinase protein RcsC [Escherichia coli 96.0427]
gi|429050892|ref|ZP_19115470.1| sensor kinase protein RcsC [Escherichia coli 97.0003]
gi|429068073|ref|ZP_19131557.1| sensor kinase protein RcsC [Escherichia coli 99.0672]
gi|429827176|ref|ZP_19358254.1| sensor kinase protein RcsC [Escherichia coli 96.0109]
gi|444953574|ref|ZP_21271685.1| sensor kinase protein RcsC [Escherichia coli 99.0848]
gi|444970198|ref|ZP_21287574.1| sensor kinase protein RcsC [Escherichia coli 99.1793]
gi|444991592|ref|ZP_21308248.1| sensor kinase protein RcsC [Escherichia coli PA19]
gi|445040720|ref|ZP_21356109.1| sensor kinase protein RcsC [Escherichia coli PA35]
gi|12516556|gb|AAG57353.1|AE005454_1 sensor for ctr capsule biosynthesis, probable histidine kinase
acting on RcsB [Escherichia coli O157:H7 str. EDL933]
gi|13362576|dbj|BAB36530.1| sensor for ctr capsule biosynthesis [Escherichia coli O157:H7 str.
Sakai]
gi|209765620|gb|ACI81122.1| sensor for ctr capsule biosynthesis [Escherichia coli]
gi|209765622|gb|ACI81123.1| sensor for ctr capsule biosynthesis [Escherichia coli]
gi|209765624|gb|ACI81124.1| sensor for ctr capsule biosynthesis [Escherichia coli]
gi|209765626|gb|ACI81125.1| sensor for ctr capsule biosynthesis [Escherichia coli]
gi|377975201|gb|EHV38522.1| his Kinase A domain protein [Escherichia coli DEC5D]
gi|390644220|gb|EIN23513.1| response regulator [Escherichia coli FDA505]
gi|390677992|gb|EIN53992.1| response regulator [Escherichia coli PA3]
gi|390697114|gb|EIN71548.1| response regulator [Escherichia coli PA10]
gi|390714145|gb|EIN87059.1| response regulator [Escherichia coli PA22]
gi|390757648|gb|EIO27118.1| response regulator [Escherichia coli PA40]
gi|390767851|gb|EIO36917.1| response regulator [Escherichia coli PA41]
gi|390806746|gb|EIO73648.1| response regulator [Escherichia coli TW09109]
gi|390861696|gb|EIP23940.1| response regulator [Escherichia coli EC4422]
gi|390883988|gb|EIP44377.1| response regulator [Escherichia coli EC4436]
gi|390896250|gb|EIP55641.1| response regulator [Escherichia coli EC4448]
gi|390919598|gb|EIP77947.1| response regulator [Escherichia coli EC1863]
gi|390920567|gb|EIP78835.1| response regulator [Escherichia coli EC1845]
gi|408071199|gb|EKH05552.1| response regulator [Escherichia coli PA34]
gi|408091411|gb|EKH24642.1| response regulator [Escherichia coli FDA504]
gi|408104232|gb|EKH36554.1| response regulator [Escherichia coli FRIK1997]
gi|408121294|gb|EKH52255.1| response regulator [Escherichia coli FRIK2001]
gi|408247544|gb|EKI69744.1| response regulator [Escherichia coli EC1846]
gi|408259329|gb|EKI80516.1| response regulator [Escherichia coli EC1848]
gi|408550854|gb|EKK28170.1| sensor kinase protein RcsC [Escherichia coli 3.4870]
gi|408591611|gb|EKK66032.1| sensor kinase protein RcsC [Escherichia coli 10.0869]
gi|427207464|gb|EKV77633.1| sensor kinase protein RcsC [Escherichia coli 89.0511]
gi|427279689|gb|EKW44100.1| sensor kinase protein RcsC [Escherichia coli 96.0427]
gi|427300818|gb|EKW63743.1| sensor kinase protein RcsC [Escherichia coli 97.0003]
gi|427319763|gb|EKW81566.1| sensor kinase protein RcsC [Escherichia coli 99.0672]
gi|429254250|gb|EKY38690.1| sensor kinase protein RcsC [Escherichia coli 96.0109]
gi|444563888|gb|ELV40864.1| sensor kinase protein RcsC [Escherichia coli 99.0848]
gi|444579751|gb|ELV55728.1| sensor kinase protein RcsC [Escherichia coli 99.1793]
gi|444607746|gb|ELV82314.1| sensor kinase protein RcsC [Escherichia coli PA19]
gi|444654795|gb|ELW27442.1| sensor kinase protein RcsC [Escherichia coli PA35]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|419051935|ref|ZP_13598807.1| his Kinase A domain protein [Escherichia coli DEC3B]
gi|419115554|ref|ZP_13660572.1| his Kinase A domain protein [Escherichia coli DEC5A]
gi|424097768|ref|ZP_17833105.1| response regulator [Escherichia coli FRIK1985]
gi|424110671|ref|ZP_17844929.1| response regulator [Escherichia coli 93-001]
gi|425150933|ref|ZP_18550567.1| sensor kinase protein RcsC [Escherichia coli 88.0221]
gi|428947837|ref|ZP_19020143.1| sensor kinase protein RcsC [Escherichia coli 88.1467]
gi|428990697|ref|ZP_19059704.1| sensor kinase protein RcsC [Escherichia coli 93.0056]
gi|428996497|ref|ZP_19065126.1| sensor kinase protein RcsC [Escherichia coli 94.0618]
gi|429008877|ref|ZP_19076421.1| sensor kinase protein RcsC [Escherichia coli 95.1288]
gi|429033493|ref|ZP_19099035.1| sensor kinase protein RcsC [Escherichia coli 96.0939]
gi|429061768|ref|ZP_19125807.1| sensor kinase protein RcsC [Escherichia coli 97.0007]
gi|429073977|ref|ZP_19137241.1| response regulator [Escherichia coli 99.0678]
gi|444948034|ref|ZP_21266356.1| sensor kinase protein RcsC [Escherichia coli 99.0839]
gi|445018851|ref|ZP_21334827.1| sensor kinase protein RcsC [Escherichia coli PA8]
gi|377893620|gb|EHU58054.1| his Kinase A domain protein [Escherichia coli DEC3B]
gi|377960504|gb|EHV23985.1| his Kinase A domain protein [Escherichia coli DEC5A]
gi|390660886|gb|EIN38576.1| response regulator [Escherichia coli 93-001]
gi|390662344|gb|EIN39948.1| response regulator [Escherichia coli FRIK1985]
gi|408596656|gb|EKK70781.1| sensor kinase protein RcsC [Escherichia coli 88.0221]
gi|427208696|gb|EKV78785.1| sensor kinase protein RcsC [Escherichia coli 88.1467]
gi|427242325|gb|EKW09740.1| sensor kinase protein RcsC [Escherichia coli 93.0056]
gi|427246478|gb|EKW13692.1| sensor kinase protein RcsC [Escherichia coli 94.0618]
gi|427265055|gb|EKW30682.1| sensor kinase protein RcsC [Escherichia coli 95.1288]
gi|427283455|gb|EKW47663.1| sensor kinase protein RcsC [Escherichia coli 96.0939]
gi|427316054|gb|EKW78028.1| sensor kinase protein RcsC [Escherichia coli 97.0007]
gi|427328583|gb|EKW89945.1| response regulator [Escherichia coli 99.0678]
gi|444557614|gb|ELV34940.1| sensor kinase protein RcsC [Escherichia coli 99.0839]
gi|444630247|gb|ELW03912.1| sensor kinase protein RcsC [Escherichia coli PA8]
Length = 926
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 792 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 850
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 851 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 906
>gi|422830091|ref|ZP_16878252.1| sensor kinase RcsC [Escherichia coli B093]
gi|371607023|gb|EHN95607.1| sensor kinase RcsC [Escherichia coli B093]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|416286543|ref|ZP_11648442.1| Two-component sensor protein RcsC [Shigella boydii ATCC 9905]
gi|320178808|gb|EFW53771.1| Two-component sensor protein RcsC [Shigella boydii ATCC 9905]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|242038337|ref|XP_002466563.1| hypothetical protein SORBIDRAFT_01g010070 [Sorghum bicolor]
gi|241920417|gb|EER93561.1| hypothetical protein SORBIDRAFT_01g010070 [Sorghum bicolor]
Length = 996
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + R+ + LK G KVE E+GK+A+ L + KFH+ +D++MP MDG EA
Sbjct: 854 LVVDDNKVNLRVAAGTLKKFGAKVECVESGKDALALLQVPYKFHLCLMDIQMPEMDGFEA 913
Query: 90 TKAMRAMKVESKIVGVTSRNSETE 113
T+ +R M+ ++ V +SET+
Sbjct: 914 TQQIRTMEAKANEQAVACDDSETD 937
>gi|218246196|ref|YP_002371567.1| PAS/PAC sensor hybrid histidine kinase [Cyanothece sp. PCC 8801]
gi|218166674|gb|ACK65411.1| PAS/PAC sensor hybrid histidine kinase [Cyanothece sp. PCC 8801]
Length = 1578
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/106 (39%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D RR+ +L SVGF+V+ A NG EAV + +T H++++D+ MPVMDG
Sbjct: 1377 YQILVVEDVDENRRLLVELLASVGFQVKEASNGLEAVAISQTWHP-HLIWMDIRMPVMDG 1435
Query: 87 IEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
EAT+ ++ A++ + I+ +T+ E +RE + AG D +KP
Sbjct: 1436 YEATRRIKQAALRQKPVIIALTASVFEEQRETVLAAGCDDIVSKPF 1481
>gi|168761345|ref|ZP_02786352.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4501]
gi|217327801|ref|ZP_03443884.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. TW14588]
gi|421831755|ref|ZP_16267042.1| response regulator [Escherichia coli PA7]
gi|423725814|ref|ZP_17699924.1| response regulator [Escherichia coli PA31]
gi|424122775|ref|ZP_17856123.1| response regulator [Escherichia coli PA5]
gi|424148198|ref|ZP_17879596.1| response regulator [Escherichia coli PA15]
gi|424450458|ref|ZP_17902183.1| response regulator [Escherichia coli PA32]
gi|424456654|ref|ZP_17907816.1| response regulator [Escherichia coli PA33]
gi|425126801|ref|ZP_18527997.1| sensor kinase protein RcsC [Escherichia coli 8.0586]
gi|425212667|ref|ZP_18608088.1| response regulator [Escherichia coli PA4]
gi|425218783|ref|ZP_18613774.1| response regulator [Escherichia coli PA23]
gi|425225311|ref|ZP_18619812.1| response regulator [Escherichia coli PA49]
gi|429079174|ref|ZP_19142321.1| sensor kinase protein RcsC [Escherichia coli 99.0713]
gi|444986279|ref|ZP_21303072.1| sensor kinase protein RcsC [Escherichia coli PA11]
gi|189368285|gb|EDU86701.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4501]
gi|217320168|gb|EEC28593.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. TW14588]
gi|390681205|gb|EIN57009.1| response regulator [Escherichia coli PA5]
gi|390701073|gb|EIN75328.1| response regulator [Escherichia coli PA15]
gi|390743019|gb|EIO14006.1| response regulator [Escherichia coli PA31]
gi|390743404|gb|EIO14381.1| response regulator [Escherichia coli PA32]
gi|390745907|gb|EIO16687.1| response regulator [Escherichia coli PA33]
gi|408064127|gb|EKG98609.1| response regulator [Escherichia coli PA7]
gi|408127713|gb|EKH58150.1| response regulator [Escherichia coli PA4]
gi|408138804|gb|EKH68460.1| response regulator [Escherichia coli PA23]
gi|408140441|gb|EKH69957.1| response regulator [Escherichia coli PA49]
gi|408570326|gb|EKK46306.1| sensor kinase protein RcsC [Escherichia coli 8.0586]
gi|427329504|gb|EKW90830.1| sensor kinase protein RcsC [Escherichia coli 99.0713]
gi|444593984|gb|ELV69188.1| sensor kinase protein RcsC [Escherichia coli PA11]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|170679899|ref|YP_001744412.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli SMS-3-5]
gi|170517617|gb|ACB15795.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
SMS-3-5]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|419278722|ref|ZP_13820969.1| his Kinase A domain protein [Escherichia coli DEC10E]
gi|378128147|gb|EHW89532.1| his Kinase A domain protein [Escherichia coli DEC10E]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|442598020|ref|ZP_21015794.1| Two-component sensor protein RcsC [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
gi|441653294|emb|CCQ01497.1| Two-component sensor protein RcsC [Escherichia coli O5:K4(L):H4
str. ATCC 23502]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|432948098|ref|ZP_20143254.1| sensor kinase RcsC [Escherichia coli KTE196]
gi|433043802|ref|ZP_20231297.1| sensor kinase RcsC [Escherichia coli KTE117]
gi|431458076|gb|ELH38413.1| sensor kinase RcsC [Escherichia coli KTE196]
gi|431555640|gb|ELI29479.1| sensor kinase RcsC [Escherichia coli KTE117]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|432869586|ref|ZP_20090179.1| sensor kinase RcsC [Escherichia coli KTE147]
gi|431410172|gb|ELG93334.1| sensor kinase RcsC [Escherichia coli KTE147]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|432750703|ref|ZP_19985307.1| sensor kinase RcsC [Escherichia coli KTE29]
gi|431296685|gb|ELF86396.1| sensor kinase RcsC [Escherichia coli KTE29]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|432680829|ref|ZP_19916203.1| sensor kinase RcsC [Escherichia coli KTE143]
gi|431220226|gb|ELF17606.1| sensor kinase RcsC [Escherichia coli KTE143]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|432637466|ref|ZP_19873336.1| sensor kinase RcsC [Escherichia coli KTE81]
gi|432705012|ref|ZP_19940113.1| sensor kinase RcsC [Escherichia coli KTE171]
gi|431170660|gb|ELE70849.1| sensor kinase RcsC [Escherichia coli KTE81]
gi|431242682|gb|ELF37094.1| sensor kinase RcsC [Escherichia coli KTE171]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|386705478|ref|YP_006169325.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
P12b]
gi|425289229|ref|ZP_18680077.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
3006]
gi|383103646|gb|AFG41155.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
P12b]
gi|408213781|gb|EKI38260.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
3006]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|81245959|gb|ABB66667.1| sensor for ctr capsule biosynthesis [Shigella boydii Sb227]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|425301082|ref|ZP_18690980.1| sensor protein RcsC [Escherichia coli 07798]
gi|408213468|gb|EKI37953.1| sensor protein RcsC [Escherichia coli 07798]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|420379234|ref|ZP_14878722.1| sensor kinase protein RcsC [Shigella dysenteriae 225-75]
gi|391305388|gb|EIQ63174.1| sensor kinase protein RcsC [Shigella dysenteriae 225-75]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|420336888|ref|ZP_14838460.1| sensor kinase protein RcsC [Shigella flexneri K-315]
gi|391261391|gb|EIQ20439.1| sensor kinase protein RcsC [Shigella flexneri K-315]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|420326136|ref|ZP_14827888.1| sensor kinase protein RcsC [Shigella flexneri CCH060]
gi|391250639|gb|EIQ09859.1| sensor kinase protein RcsC [Shigella flexneri CCH060]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|419914472|ref|ZP_14432870.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Escherichia coli KD1]
gi|388386743|gb|EIL48383.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Escherichia coli KD1]
Length = 909
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 775 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 833
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 834 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 889
>gi|417133962|ref|ZP_11978747.1| sensor kinase protein RcsC [Escherichia coli 5.0588]
gi|386151816|gb|EIH03105.1| sensor kinase protein RcsC [Escherichia coli 5.0588]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417115714|ref|ZP_11966850.1| sensor kinase protein RcsC [Escherichia coli 1.2741]
gi|386141133|gb|EIG82285.1| sensor kinase protein RcsC [Escherichia coli 1.2741]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|419805509|ref|ZP_14330643.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
AI27]
gi|384471466|gb|EIE55543.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
AI27]
Length = 926
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 792 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 850
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 851 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 906
>gi|419381489|ref|ZP_13922440.1| his Kinase A domain protein [Escherichia coli DEC14C]
gi|378227856|gb|EHX88024.1| his Kinase A domain protein [Escherichia coli DEC14C]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417298318|ref|ZP_12085557.1| sensor kinase protein RcsC [Escherichia coli 900105 (10e)]
gi|419255601|ref|ZP_13798120.1| his Kinase A domain protein [Escherichia coli DEC10A]
gi|419267672|ref|ZP_13810027.1| his Kinase A domain protein [Escherichia coli DEC10C]
gi|420122393|ref|ZP_14631369.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CVM10030]
gi|420128473|ref|ZP_14637029.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CVM10224]
gi|420134377|ref|ZP_14642486.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CVM9952]
gi|424754245|ref|ZP_18182163.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CFSAN001629]
gi|378100587|gb|EHW62283.1| his Kinase A domain protein [Escherichia coli DEC10A]
gi|378111500|gb|EHW73084.1| his Kinase A domain protein [Escherichia coli DEC10C]
gi|386257998|gb|EIJ13480.1| sensor kinase protein RcsC [Escherichia coli 900105 (10e)]
gi|394385592|gb|EJE63119.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CVM10224]
gi|394421632|gb|EJE95090.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CVM9952]
gi|394421978|gb|EJE95389.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CVM10030]
gi|421933735|gb|EKT91520.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CFSAN001629]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|422978997|ref|ZP_16977776.1| sensor kinase RcsC [Escherichia coli TA124]
gi|432851508|ref|ZP_20081893.1| sensor kinase RcsC [Escherichia coli KTE144]
gi|371592350|gb|EHN81258.1| sensor kinase RcsC [Escherichia coli TA124]
gi|431399846|gb|ELG83236.1| sensor kinase RcsC [Escherichia coli KTE144]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417639973|ref|ZP_12290114.1| sensor kinase protein rcsC [Escherichia coli TX1999]
gi|345392975|gb|EGX22753.1| sensor kinase protein rcsC [Escherichia coli TX1999]
Length = 929
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 795 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 853
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 854 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 909
>gi|415879987|ref|ZP_11544988.1| sensor kinase protein RcsC [Escherichia coli MS 79-10]
gi|342926589|gb|EGU95311.1| sensor kinase protein RcsC [Escherichia coli MS 79-10]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|417718095|ref|ZP_12366996.1| sensor kinase protein rcsC [Shigella flexneri K-227]
gi|333016950|gb|EGK36274.1| sensor kinase protein rcsC [Shigella flexneri K-227]
Length = 880
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 746 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 804
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 805 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 860
>gi|417708262|ref|ZP_12357295.1| sensor kinase protein rcsC [Shigella flexneri VA-6]
gi|333001362|gb|EGK20930.1| sensor kinase protein rcsC [Shigella flexneri VA-6]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|416898283|ref|ZP_11927847.1| sensor kinase protein rcsC [Escherichia coli STEC_7v]
gi|422799525|ref|ZP_16848024.1| RcsC Alpha-Beta-Loop [Escherichia coli M863]
gi|323967660|gb|EGB63072.1| RcsC Alpha-Beta-Loop [Escherichia coli M863]
gi|327252487|gb|EGE64146.1| sensor kinase protein rcsC [Escherichia coli STEC_7v]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|415840597|ref|ZP_11522025.1| sensor kinase protein rcsC [Escherichia coli RN587/1]
gi|417282034|ref|ZP_12069334.1| sensor kinase protein RcsC [Escherichia coli 3003]
gi|425278517|ref|ZP_18669763.1| sensor protein RcsC [Escherichia coli ARS4.2123]
gi|323188054|gb|EFZ73349.1| sensor kinase protein rcsC [Escherichia coli RN587/1]
gi|386246363|gb|EII88093.1| sensor kinase protein RcsC [Escherichia coli 3003]
gi|408201930|gb|EKI27064.1| sensor protein RcsC [Escherichia coli ARS4.2123]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|331653653|ref|ZP_08354654.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli M718]
gi|331048502|gb|EGI20578.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli M718]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|301647691|ref|ZP_07247485.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 146-1]
gi|415778277|ref|ZP_11489323.1| sensor kinase protein rcsC [Escherichia coli 3431]
gi|301074221|gb|EFK89027.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 146-1]
gi|315615480|gb|EFU96112.1| sensor kinase protein rcsC [Escherichia coli 3431]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|300903600|ref|ZP_07121518.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 84-1]
gi|301306550|ref|ZP_07212613.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 124-1]
gi|415863948|ref|ZP_11537099.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 85-1]
gi|300404336|gb|EFJ87874.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 84-1]
gi|300838210|gb|EFK65970.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 124-1]
gi|315255153|gb|EFU35121.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 85-1]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|293405685|ref|ZP_06649677.1| hybrid sensory kinase [Escherichia coli FVEC1412]
gi|298381367|ref|ZP_06990966.1| two-component system [Escherichia coli FVEC1302]
gi|417587234|ref|ZP_12238004.1| sensor kinase protein rcsC [Escherichia coli STEC_C165-02]
gi|419932863|ref|ZP_14450144.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 576-1]
gi|432354157|ref|ZP_19597430.1| sensor kinase RcsC [Escherichia coli KTE2]
gi|432402509|ref|ZP_19645261.1| sensor kinase RcsC [Escherichia coli KTE26]
gi|432426773|ref|ZP_19669274.1| sensor kinase RcsC [Escherichia coli KTE181]
gi|432461239|ref|ZP_19703388.1| sensor kinase RcsC [Escherichia coli KTE204]
gi|432476446|ref|ZP_19718445.1| sensor kinase RcsC [Escherichia coli KTE208]
gi|432489894|ref|ZP_19731768.1| sensor kinase RcsC [Escherichia coli KTE213]
gi|432518288|ref|ZP_19755476.1| sensor kinase RcsC [Escherichia coli KTE228]
gi|432538409|ref|ZP_19775311.1| sensor kinase RcsC [Escherichia coli KTE235]
gi|432632004|ref|ZP_19867930.1| sensor kinase RcsC [Escherichia coli KTE80]
gi|432641718|ref|ZP_19877552.1| sensor kinase RcsC [Escherichia coli KTE83]
gi|432666613|ref|ZP_19902194.1| sensor kinase RcsC [Escherichia coli KTE116]
gi|432771180|ref|ZP_20005519.1| sensor kinase RcsC [Escherichia coli KTE50]
gi|432775302|ref|ZP_20009581.1| sensor kinase RcsC [Escherichia coli KTE54]
gi|432839902|ref|ZP_20073388.1| sensor kinase RcsC [Escherichia coli KTE140]
gi|432887199|ref|ZP_20101273.1| sensor kinase RcsC [Escherichia coli KTE158]
gi|432913397|ref|ZP_20119094.1| sensor kinase RcsC [Escherichia coli KTE190]
gi|432962386|ref|ZP_20152039.1| sensor kinase RcsC [Escherichia coli KTE202]
gi|433019286|ref|ZP_20207507.1| sensor kinase RcsC [Escherichia coli KTE105]
gi|433053826|ref|ZP_20241006.1| sensor kinase RcsC [Escherichia coli KTE122]
gi|433063680|ref|ZP_20250603.1| sensor kinase RcsC [Escherichia coli KTE125]
gi|433068531|ref|ZP_20255321.1| sensor kinase RcsC [Escherichia coli KTE128]
gi|433159260|ref|ZP_20344098.1| sensor kinase RcsC [Escherichia coli KTE177]
gi|433179073|ref|ZP_20363473.1| sensor kinase RcsC [Escherichia coli KTE82]
gi|433203835|ref|ZP_20387611.1| sensor kinase RcsC [Escherichia coli KTE95]
gi|291427893|gb|EFF00920.1| hybrid sensory kinase [Escherichia coli FVEC1412]
gi|298278809|gb|EFI20323.1| two-component system [Escherichia coli FVEC1302]
gi|345336370|gb|EGW68806.1| sensor kinase protein rcsC [Escherichia coli STEC_C165-02]
gi|388415374|gb|EIL75305.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 576-1]
gi|430875330|gb|ELB98872.1| sensor kinase RcsC [Escherichia coli KTE2]
gi|430924980|gb|ELC45653.1| sensor kinase RcsC [Escherichia coli KTE26]
gi|430955705|gb|ELC74487.1| sensor kinase RcsC [Escherichia coli KTE181]
gi|430988929|gb|ELD05398.1| sensor kinase RcsC [Escherichia coli KTE204]
gi|431005614|gb|ELD20635.1| sensor kinase RcsC [Escherichia coli KTE208]
gi|431020511|gb|ELD33856.1| sensor kinase RcsC [Escherichia coli KTE213]
gi|431050910|gb|ELD60586.1| sensor kinase RcsC [Escherichia coli KTE228]
gi|431069298|gb|ELD77627.1| sensor kinase RcsC [Escherichia coli KTE235]
gi|431170204|gb|ELE70398.1| sensor kinase RcsC [Escherichia coli KTE80]
gi|431181601|gb|ELE81463.1| sensor kinase RcsC [Escherichia coli KTE83]
gi|431200907|gb|ELE99625.1| sensor kinase RcsC [Escherichia coli KTE116]
gi|431314877|gb|ELG02809.1| sensor kinase RcsC [Escherichia coli KTE50]
gi|431318341|gb|ELG06107.1| sensor kinase RcsC [Escherichia coli KTE54]
gi|431389075|gb|ELG72790.1| sensor kinase RcsC [Escherichia coli KTE140]
gi|431416197|gb|ELG98684.1| sensor kinase RcsC [Escherichia coli KTE158]
gi|431439697|gb|ELH21030.1| sensor kinase RcsC [Escherichia coli KTE190]
gi|431474177|gb|ELH53999.1| sensor kinase RcsC [Escherichia coli KTE202]
gi|431531187|gb|ELI07856.1| sensor kinase RcsC [Escherichia coli KTE105]
gi|431570226|gb|ELI43152.1| sensor kinase RcsC [Escherichia coli KTE122]
gi|431581674|gb|ELI54121.1| sensor kinase RcsC [Escherichia coli KTE125]
gi|431584158|gb|ELI56145.1| sensor kinase RcsC [Escherichia coli KTE128]
gi|431677899|gb|ELJ43912.1| sensor kinase RcsC [Escherichia coli KTE177]
gi|431701438|gb|ELJ66357.1| sensor kinase RcsC [Escherichia coli KTE82]
gi|431721384|gb|ELJ85379.1| sensor kinase RcsC [Escherichia coli KTE95]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|290473792|ref|YP_003466666.1| hybrid sensory histidine kinase in two-component regulatory system
with RcsB and YojN, regulates capsule biosynthesis, cell
division genes, OsmC expression [Xenorhabdus bovienii
SS-2004]
gi|289173099|emb|CBJ79872.1| hybrid sensory histidine kinase in two-component regulatory system
with RcsB and YojN, regulates capsule biosynthesis, cell
division genes, OsmC expression [Xenorhabdus bovienii
SS-2004]
Length = 921
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 63/112 (56%), Gaps = 1/112 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ R + L ++GF+ A +G +A++ + + I+ D+ MP MDG E
Sbjct: 805 LVVDDHPLNRHLLIEQLNTIGFRTASANDGIDAIEHLKNNST-DIILTDVNMPNMDGYEL 863
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
TK +R S I+G+T+ E++ AG+D C +KP+++A + L E
Sbjct: 864 TKYLRDKGYTSPIIGITANALAEEKQRCADAGMDYCLSKPVSLATLRDTLIE 915
>gi|260868935|ref|YP_003235337.1| hybrid sensory kinase RcsC in two-component regulatory system with
RcsB and YojN [Escherichia coli O111:H- str. 11128]
gi|257765291|dbj|BAI36786.1| hybrid sensory kinase RcsC in two-component regulatory system with
RcsB and YojN [Escherichia coli O111:H- str. 11128]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|332278624|ref|ZP_08391037.1| hybrid sensory kinase in two-component system response regulatory
system with RcsB and YojN [Shigella sp. D9]
gi|332100976|gb|EGJ04322.1| hybrid sensory kinase in two-component system response regulatory
system with RcsB and YojN [Shigella sp. D9]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|256831239|ref|YP_003159967.1| multi-sensor hybrid histidine kinase [Desulfomicrobium baculatum DSM
4028]
gi|256580415|gb|ACU91551.1| multi-sensor hybrid histidine kinase [Desulfomicrobium baculatum DSM
4028]
Length = 1078
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 42/134 (31%), Positives = 78/134 (58%), Gaps = 7/134 (5%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRI-HSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI 74
++E+ + P L++ +D I ++ +L+ G +V +A+NG+E +DL R F
Sbjct: 941 VAESVALEAGPGLRLLLAEDEAINQLAMRTLLEKAGHRVSIAQNGQEVLDLLRE-EDFDC 999
Query: 75 VFIDMEMPVMDGIEATKAMR-----AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKP 129
V +D++MPVM GIEAT+ +R A + + I+ +T+ +RE F+QAG+D +KP
Sbjct: 1000 VLMDVQMPVMSGIEATRRIRTSPELAARKDVPIIALTAHAMSGDRESFLQAGMDDYLSKP 1059
Query: 130 LTMAKIVPLLEELQ 143
+ + +V + +L+
Sbjct: 1060 VGLDDLVKAIAKLK 1073
>gi|188493885|ref|ZP_03001155.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
53638]
gi|420321099|ref|ZP_14822929.1| sensor kinase protein RcsC [Shigella flexneri 2850-71]
gi|424838595|ref|ZP_18263232.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Shigella flexneri 5a str. M90T]
gi|188489084|gb|EDU64187.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
53638]
gi|383467647|gb|EID62668.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Shigella flexneri 5a str. M90T]
gi|391248392|gb|EIQ07634.1| sensor kinase protein RcsC [Shigella flexneri 2850-71]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|187731557|ref|YP_001879435.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Shigella boydii CDC 3083-94]
gi|187428549|gb|ACD07823.1| sensor histidine kinase/response regulator RcsC [Shigella boydii
CDC 3083-94]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|161986500|ref|YP_311159.2| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Shigella sonnei Ss046]
gi|191165347|ref|ZP_03027189.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
B7A]
gi|193062260|ref|ZP_03043355.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
E22]
gi|193068180|ref|ZP_03049144.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
E110019]
gi|194427111|ref|ZP_03059662.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
B171]
gi|293415518|ref|ZP_06658161.1| two-component system [Escherichia coli B185]
gi|293446568|ref|ZP_06662990.1| two-component system [Escherichia coli B088]
gi|307311208|ref|ZP_07590852.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
W]
gi|331668924|ref|ZP_08369772.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli TA271]
gi|331678173|ref|ZP_08378848.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli H591]
gi|378712333|ref|YP_005277226.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
KO11FL]
gi|383179187|ref|YP_005457192.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Shigella sonnei 53G]
gi|386609609|ref|YP_006125095.1| hybrid sensory kinase in two-component regulatory system with RcsB
and RcsD [Escherichia coli W]
gi|386700795|ref|YP_006164632.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli KO11FL]
gi|386710093|ref|YP_006173814.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli W]
gi|407470110|ref|YP_006783447.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407481227|ref|YP_006778376.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O104:H4 str. 2011C-3493]
gi|410481774|ref|YP_006769320.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O104:H4 str. 2009EL-2050]
gi|414576829|ref|ZP_11434011.1| sensor kinase protein RcsC [Shigella sonnei 3233-85]
gi|415798393|ref|ZP_11498411.1| sensor kinase protein rcsC [Escherichia coli E128010]
gi|415829084|ref|ZP_11515467.1| sensor kinase protein rcsC [Escherichia coli OK1357]
gi|415844512|ref|ZP_11524254.1| sensor kinase protein rcsC [Shigella sonnei 53G]
gi|416343781|ref|ZP_11677681.1| Two-component sensor protein RcsC [Escherichia coli EC4100B]
gi|417122453|ref|ZP_11971711.1| sensor kinase protein RcsC [Escherichia coli 97.0246]
gi|417145876|ref|ZP_11986834.1| sensor kinase protein RcsC [Escherichia coli 1.2264]
gi|417154623|ref|ZP_11992752.1| sensor kinase protein RcsC [Escherichia coli 96.0497]
gi|417163494|ref|ZP_11998682.1| sensor kinase protein RcsC [Escherichia coli 99.0741]
gi|417173795|ref|ZP_12003591.1| sensor kinase protein RcsC [Escherichia coli 3.2608]
gi|417182770|ref|ZP_12009327.1| sensor kinase protein RcsC [Escherichia coli 93.0624]
gi|417192260|ref|ZP_12014360.1| sensor kinase protein RcsC [Escherichia coli 4.0522]
gi|417213707|ref|ZP_12022748.1| sensor kinase protein RcsC [Escherichia coli JB1-95]
gi|417221106|ref|ZP_12024546.1| sensor kinase protein RcsC [Escherichia coli 96.154]
gi|417231551|ref|ZP_12032949.1| sensor kinase protein RcsC [Escherichia coli 5.0959]
gi|417238237|ref|ZP_12035968.1| sensor kinase protein RcsC [Escherichia coli 9.0111]
gi|417254237|ref|ZP_12045993.1| sensor kinase protein RcsC [Escherichia coli 4.0967]
gi|417269592|ref|ZP_12056952.1| sensor kinase protein RcsC [Escherichia coli 3.3884]
gi|417581745|ref|ZP_12232547.1| sensor kinase protein rcsC [Escherichia coli STEC_B2F1]
gi|417592498|ref|ZP_12243195.1| sensor kinase protein rcsC [Escherichia coli 2534-86]
gi|417602832|ref|ZP_12253402.1| sensor kinase protein rcsC [Escherichia coli STEC_94C]
gi|417608868|ref|ZP_12259371.1| sensor kinase protein rcsC [Escherichia coli STEC_DG131-3]
gi|417667641|ref|ZP_12317186.1| sensor kinase protein rcsC [Escherichia coli STEC_O31]
gi|417805786|ref|ZP_12452735.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O104:H4 str. LB226692]
gi|417833525|ref|ZP_12479973.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O104:H4 str. 01-09591]
gi|417863453|ref|ZP_12508501.1| rcsC [Escherichia coli O104:H4 str. C227-11]
gi|418266616|ref|ZP_12886097.1| his Kinase A domain protein [Shigella sonnei str. Moseley]
gi|418945044|ref|ZP_13497985.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H43 str. T22]
gi|419170894|ref|ZP_13714780.1| sensor kinase protein RcsC [Escherichia coli DEC7A]
gi|419181539|ref|ZP_13725152.1| his Kinase A domain protein [Escherichia coli DEC7C]
gi|419186979|ref|ZP_13730493.1| his Kinase A domain protein [Escherichia coli DEC7D]
gi|419192271|ref|ZP_13735724.1| sensor kinase protein RcsC [Escherichia coli DEC7E]
gi|419197703|ref|ZP_13741091.1| sensor kinase protein RcsC [Escherichia coli DEC8A]
gi|419204068|ref|ZP_13747251.1| his Kinase A domain protein [Escherichia coli DEC8B]
gi|419210395|ref|ZP_13753474.1| his Kinase A domain protein [Escherichia coli DEC8C]
gi|419216270|ref|ZP_13759272.1| his Kinase A domain protein [Escherichia coli DEC8D]
gi|419222211|ref|ZP_13765134.1| his Kinase A domain protein [Escherichia coli DEC8E]
gi|419227409|ref|ZP_13770267.1| his Kinase A domain protein [Escherichia coli DEC9A]
gi|419233038|ref|ZP_13775815.1| his Kinase A domain protein [Escherichia coli DEC9B]
gi|419238492|ref|ZP_13781213.1| his Kinase A domain protein [Escherichia coli DEC9C]
gi|419243942|ref|ZP_13786581.1| his Kinase A domain protein [Escherichia coli DEC9D]
gi|419249766|ref|ZP_13792350.1| his Kinase A domain protein [Escherichia coli DEC9E]
gi|419261805|ref|ZP_13804227.1| his Kinase A domain protein [Escherichia coli DEC10B]
gi|419273334|ref|ZP_13815633.1| his Kinase A domain protein [Escherichia coli DEC10D]
gi|419284824|ref|ZP_13827000.1| his Kinase A domain protein [Escherichia coli DEC10F]
gi|419290167|ref|ZP_13832259.1| his Kinase A domain protein [Escherichia coli DEC11A]
gi|419295494|ref|ZP_13837540.1| his Kinase A domain protein [Escherichia coli DEC11B]
gi|419300953|ref|ZP_13842952.1| sensor kinase protein RcsC [Escherichia coli DEC11C]
gi|419307086|ref|ZP_13848986.1| sensor kinase protein RcsC [Escherichia coli DEC11D]
gi|419312092|ref|ZP_13853954.1| sensor kinase protein RcsC [Escherichia coli DEC11E]
gi|419317503|ref|ZP_13859306.1| sensor kinase protein RcsC [Escherichia coli DEC12A]
gi|419323678|ref|ZP_13865371.1| his Kinase A domain protein [Escherichia coli DEC12B]
gi|419335206|ref|ZP_13876739.1| his Kinase A domain protein [Escherichia coli DEC12D]
gi|419340673|ref|ZP_13882137.1| his Kinase A domain protein [Escherichia coli DEC12E]
gi|419345884|ref|ZP_13887259.1| his Kinase A domain protein [Escherichia coli DEC13A]
gi|419355715|ref|ZP_13896973.1| his Kinase A domain protein [Escherichia coli DEC13C]
gi|419360805|ref|ZP_13902023.1| his Kinase A domain protein [Escherichia coli DEC13D]
gi|419365702|ref|ZP_13906864.1| his Kinase A domain protein [Escherichia coli DEC13E]
gi|419370727|ref|ZP_13911846.1| sensor kinase protein RcsC [Escherichia coli DEC14A]
gi|419392315|ref|ZP_13933127.1| his Kinase A domain protein [Escherichia coli DEC15A]
gi|419397355|ref|ZP_13938123.1| his Kinase A domain protein [Escherichia coli DEC15B]
gi|419402697|ref|ZP_13943421.1| his Kinase A domain protein [Escherichia coli DEC15C]
gi|419407814|ref|ZP_13948503.1| his Kinase A domain protein [Escherichia coli DEC15D]
gi|419413402|ref|ZP_13954054.1| his Kinase A domain protein [Escherichia coli DEC15E]
gi|419862568|ref|ZP_14385162.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O103:H25 str. CVM9340]
gi|419870591|ref|ZP_14392684.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O103:H2 str. CVM9450]
gi|419877046|ref|ZP_14398704.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H11 str. CVM9534]
gi|419883264|ref|ZP_14404396.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H11 str. CVM9545]
gi|419895824|ref|ZP_14415609.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H8 str. CVM9574]
gi|419899931|ref|ZP_14419412.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CVM9942]
gi|419909098|ref|ZP_14427732.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
O26:H11 str. CVM10026]
gi|419922108|ref|ZP_14440131.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 541-15]
gi|419930924|ref|ZP_14448515.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 541-1]
gi|419950527|ref|ZP_14466739.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli CUMT8]
gi|420089895|ref|ZP_14601675.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H8 str. CVM9602]
gi|420095754|ref|ZP_14607234.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H8 str. CVM9634]
gi|420102272|ref|ZP_14613296.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H11 str. CVM9455]
gi|420109991|ref|ZP_14620057.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H11 str. CVM9553]
gi|420118030|ref|ZP_14627374.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CVM10021]
gi|420359294|ref|ZP_14860268.1| sensor kinase protein RcsC [Shigella sonnei 3226-85]
gi|420364334|ref|ZP_14865217.1| his Kinase A domain protein [Shigella sonnei 4822-66]
gi|420386284|ref|ZP_14885634.1| sensor kinase protein RcsC [Escherichia coli EPECa12]
gi|422762266|ref|ZP_16816023.1| RcsC Alpha-Beta-Loop [Escherichia coli E1167]
gi|422777511|ref|ZP_16831163.1| RcsC Alpha-Beta-Loop [Escherichia coli H120]
gi|422834616|ref|ZP_16882677.1| sensor kinase RcsC [Escherichia coli E101]
gi|422956409|ref|ZP_16968883.1| sensor kinase RcsC [Escherichia coli H494]
gi|422988343|ref|ZP_16979116.1| sensor kinase RcsC [Escherichia coli O104:H4 str. C227-11]
gi|422995234|ref|ZP_16985998.1| sensor kinase RcsC [Escherichia coli O104:H4 str. C236-11]
gi|423000309|ref|ZP_16991063.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 09-7901]
gi|423003978|ref|ZP_16994724.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 04-8351]
gi|423010551|ref|ZP_17001285.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-3677]
gi|423019778|ref|ZP_17010487.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4404]
gi|423024945|ref|ZP_17015642.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4522]
gi|423030766|ref|ZP_17021454.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4623]
gi|423038592|ref|ZP_17029266.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423043711|ref|ZP_17034378.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423045440|ref|ZP_17036100.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423053979|ref|ZP_17042786.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423060954|ref|ZP_17049750.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4632 C5]
gi|424757468|ref|ZP_18185205.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H11 str. CFSAN001630]
gi|424772676|ref|ZP_18199770.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H8 str. CFSAN001632]
gi|425305947|ref|ZP_18695658.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
N1]
gi|429719823|ref|ZP_19254754.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-9450]
gi|429771705|ref|ZP_19303728.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02030]
gi|429781637|ref|ZP_19313566.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02033-1]
gi|429785377|ref|ZP_19317275.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02092]
gi|429791266|ref|ZP_19323123.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02093]
gi|429797093|ref|ZP_19328901.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02281]
gi|429798691|ref|ZP_19330492.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02318]
gi|429807204|ref|ZP_19338931.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02913]
gi|429812104|ref|ZP_19343790.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-03439]
gi|429817624|ref|ZP_19349265.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-04080]
gi|429822835|ref|ZP_19354433.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-03943]
gi|429904215|ref|ZP_19370194.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-9990]
gi|429908352|ref|ZP_19374316.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-9941]
gi|429914223|ref|ZP_19380171.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-4984]
gi|429919254|ref|ZP_19385186.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-5604]
gi|429925073|ref|ZP_19390987.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-4986]
gi|429929010|ref|ZP_19394912.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-4987]
gi|429935549|ref|ZP_19401435.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-4988]
gi|429941229|ref|ZP_19407103.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-5603]
gi|429943909|ref|ZP_19409772.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-6006]
gi|429951509|ref|ZP_19417355.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec12-0465]
gi|429954821|ref|ZP_19420653.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec12-0466]
gi|432377390|ref|ZP_19620381.1| sensor kinase RcsC [Escherichia coli KTE12]
gi|432450381|ref|ZP_19692646.1| sensor kinase RcsC [Escherichia coli KTE193]
gi|432481590|ref|ZP_19723547.1| sensor kinase RcsC [Escherichia coli KTE210]
gi|432675335|ref|ZP_19910794.1| sensor kinase RcsC [Escherichia coli KTE142]
gi|432806379|ref|ZP_20040307.1| sensor kinase RcsC [Escherichia coli KTE91]
gi|432809872|ref|ZP_20043765.1| sensor kinase RcsC [Escherichia coli KTE101]
gi|432832248|ref|ZP_20065822.1| sensor kinase RcsC [Escherichia coli KTE135]
gi|432835207|ref|ZP_20068746.1| sensor kinase RcsC [Escherichia coli KTE136]
gi|432862812|ref|ZP_20087101.1| sensor kinase RcsC [Escherichia coli KTE146]
gi|432935013|ref|ZP_20134450.1| sensor kinase RcsC [Escherichia coli KTE184]
gi|432968327|ref|ZP_20157242.1| sensor kinase RcsC [Escherichia coli KTE203]
gi|433034060|ref|ZP_20221776.1| sensor kinase RcsC [Escherichia coli KTE112]
gi|433092609|ref|ZP_20278876.1| sensor kinase RcsC [Escherichia coli KTE138]
gi|433130790|ref|ZP_20316225.1| sensor kinase RcsC [Escherichia coli KTE163]
gi|433135452|ref|ZP_20320796.1| sensor kinase RcsC [Escherichia coli KTE166]
gi|433194300|ref|ZP_20378290.1| sensor kinase RcsC [Escherichia coli KTE90]
gi|443618298|ref|YP_007382154.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli APEC O78]
gi|450218568|ref|ZP_21895942.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O08]
gi|190904510|gb|EDV64217.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
B7A]
gi|192931926|gb|EDV84525.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
E22]
gi|192958459|gb|EDV88898.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
E110019]
gi|194414732|gb|EDX31003.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
B171]
gi|291323398|gb|EFE62826.1| two-component system [Escherichia coli B088]
gi|291433166|gb|EFF06145.1| two-component system [Escherichia coli B185]
gi|306908714|gb|EFN39211.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
W]
gi|315061526|gb|ADT75853.1| hybrid sensory kinase in two-component regulatory system with RcsB
and RcsD [Escherichia coli W]
gi|320199813|gb|EFW74402.1| Two-component sensor protein RcsC [Escherichia coli EC4100B]
gi|323161685|gb|EFZ47568.1| sensor kinase protein rcsC [Escherichia coli E128010]
gi|323168624|gb|EFZ54304.1| sensor kinase protein rcsC [Shigella sonnei 53G]
gi|323184157|gb|EFZ69534.1| sensor kinase protein rcsC [Escherichia coli OK1357]
gi|323377894|gb|ADX50162.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
KO11FL]
gi|323945034|gb|EGB41099.1| RcsC Alpha-Beta-Loop [Escherichia coli H120]
gi|324117892|gb|EGC11791.1| RcsC Alpha-Beta-Loop [Escherichia coli E1167]
gi|331064118|gb|EGI36029.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli TA271]
gi|331074633|gb|EGI45953.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli H591]
gi|340734407|gb|EGR63537.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O104:H4 str. 01-09591]
gi|340739698|gb|EGR73930.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O104:H4 str. LB226692]
gi|341916742|gb|EGT66359.1| rcsC [Escherichia coli O104:H4 str. C227-11]
gi|345337516|gb|EGW69948.1| sensor kinase protein rcsC [Escherichia coli STEC_B2F1]
gi|345338835|gb|EGW71262.1| sensor kinase protein rcsC [Escherichia coli 2534-86]
gi|345350498|gb|EGW82773.1| sensor kinase protein rcsC [Escherichia coli STEC_94C]
gi|345358077|gb|EGW90265.1| sensor kinase protein rcsC [Escherichia coli STEC_DG131-3]
gi|354862069|gb|EHF22507.1| sensor kinase RcsC [Escherichia coli O104:H4 str. C236-11]
gi|354867354|gb|EHF27776.1| sensor kinase RcsC [Escherichia coli O104:H4 str. C227-11]
gi|354869425|gb|EHF29835.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 04-8351]
gi|354873280|gb|EHF33657.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 09-7901]
gi|354880034|gb|EHF40370.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-3677]
gi|354889458|gb|EHF49707.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4404]
gi|354893053|gb|EHF53257.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4522]
gi|354895190|gb|EHF55379.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354897464|gb|EHF57622.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4623]
gi|354898825|gb|EHF58976.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354912876|gb|EHF72874.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4632 C5]
gi|354915881|gb|EHF75857.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354917796|gb|EHF77758.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-4632 C4]
gi|371599944|gb|EHN88722.1| sensor kinase RcsC [Escherichia coli H494]
gi|371601408|gb|EHN90158.1| sensor kinase RcsC [Escherichia coli E101]
gi|375319639|gb|EHS65745.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H43 str. T22]
gi|378014938|gb|EHV77835.1| sensor kinase protein RcsC [Escherichia coli DEC7A]
gi|378023172|gb|EHV85849.1| his Kinase A domain protein [Escherichia coli DEC7C]
gi|378028971|gb|EHV91587.1| his Kinase A domain protein [Escherichia coli DEC7D]
gi|378038335|gb|EHW00850.1| sensor kinase protein RcsC [Escherichia coli DEC7E]
gi|378047235|gb|EHW09607.1| sensor kinase protein RcsC [Escherichia coli DEC8A]
gi|378048788|gb|EHW11141.1| his Kinase A domain protein [Escherichia coli DEC8B]
gi|378053851|gb|EHW16143.1| his Kinase A domain protein [Escherichia coli DEC8C]
gi|378062754|gb|EHW24931.1| his Kinase A domain protein [Escherichia coli DEC8D]
gi|378065533|gb|EHW27678.1| his Kinase A domain protein [Escherichia coli DEC8E]
gi|378074922|gb|EHW36951.1| his Kinase A domain protein [Escherichia coli DEC9A]
gi|378077565|gb|EHW39559.1| his Kinase A domain protein [Escherichia coli DEC9B]
gi|378084392|gb|EHW46304.1| his Kinase A domain protein [Escherichia coli DEC9C]
gi|378091020|gb|EHW52855.1| his Kinase A domain protein [Escherichia coli DEC9D]
gi|378095351|gb|EHW57139.1| his Kinase A domain protein [Escherichia coli DEC9E]
gi|378106854|gb|EHW68482.1| his Kinase A domain protein [Escherichia coli DEC10B]
gi|378116791|gb|EHW78311.1| his Kinase A domain protein [Escherichia coli DEC10D]
gi|378129968|gb|EHW91338.1| his Kinase A domain protein [Escherichia coli DEC11A]
gi|378132078|gb|EHW93431.1| his Kinase A domain protein [Escherichia coli DEC10F]
gi|378142581|gb|EHX03783.1| his Kinase A domain protein [Escherichia coli DEC11B]
gi|378149073|gb|EHX10206.1| sensor kinase protein RcsC [Escherichia coli DEC11D]
gi|378150569|gb|EHX11684.1| sensor kinase protein RcsC [Escherichia coli DEC11C]
gi|378157720|gb|EHX18751.1| sensor kinase protein RcsC [Escherichia coli DEC11E]
gi|378164754|gb|EHX25695.1| his Kinase A domain protein [Escherichia coli DEC12B]
gi|378169086|gb|EHX29986.1| sensor kinase protein RcsC [Escherichia coli DEC12A]
gi|378182285|gb|EHX42938.1| his Kinase A domain protein [Escherichia coli DEC12D]
gi|378186997|gb|EHX47618.1| his Kinase A domain protein [Escherichia coli DEC13A]
gi|378187584|gb|EHX48195.1| his Kinase A domain protein [Escherichia coli DEC12E]
gi|378201045|gb|EHX61498.1| his Kinase A domain protein [Escherichia coli DEC13C]
gi|378203246|gb|EHX63670.1| his Kinase A domain protein [Escherichia coli DEC13D]
gi|378212937|gb|EHX73256.1| his Kinase A domain protein [Escherichia coli DEC13E]
gi|378217321|gb|EHX77600.1| sensor kinase protein RcsC [Escherichia coli DEC14A]
gi|378237515|gb|EHX97538.1| his Kinase A domain protein [Escherichia coli DEC15A]
gi|378243476|gb|EHY03422.1| his Kinase A domain protein [Escherichia coli DEC15B]
gi|378247231|gb|EHY07150.1| his Kinase A domain protein [Escherichia coli DEC15C]
gi|378254193|gb|EHY14057.1| his Kinase A domain protein [Escherichia coli DEC15D]
gi|378258834|gb|EHY18650.1| his Kinase A domain protein [Escherichia coli DEC15E]
gi|383392322|gb|AFH17280.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli KO11FL]
gi|383405785|gb|AFH12028.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli W]
gi|386147733|gb|EIG94173.1| sensor kinase protein RcsC [Escherichia coli 97.0246]
gi|386163328|gb|EIH25123.1| sensor kinase protein RcsC [Escherichia coli 1.2264]
gi|386167712|gb|EIH34228.1| sensor kinase protein RcsC [Escherichia coli 96.0497]
gi|386172719|gb|EIH44733.1| sensor kinase protein RcsC [Escherichia coli 99.0741]
gi|386176487|gb|EIH53966.1| sensor kinase protein RcsC [Escherichia coli 3.2608]
gi|386184623|gb|EIH67362.1| sensor kinase protein RcsC [Escherichia coli 93.0624]
gi|386191142|gb|EIH79888.1| sensor kinase protein RcsC [Escherichia coli 4.0522]
gi|386194403|gb|EIH88659.1| sensor kinase protein RcsC [Escherichia coli JB1-95]
gi|386200908|gb|EIH99898.1| sensor kinase protein RcsC [Escherichia coli 96.154]
gi|386204550|gb|EII09061.1| sensor kinase protein RcsC [Escherichia coli 5.0959]
gi|386214015|gb|EII24440.1| sensor kinase protein RcsC [Escherichia coli 9.0111]
gi|386216164|gb|EII32656.1| sensor kinase protein RcsC [Escherichia coli 4.0967]
gi|386228397|gb|EII55753.1| sensor kinase protein RcsC [Escherichia coli 3.3884]
gi|388339392|gb|EIL05777.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O103:H2 str. CVM9450]
gi|388341797|gb|EIL07882.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H11 str. CVM9534]
gi|388344708|gb|EIL10532.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O103:H25 str. CVM9340]
gi|388358999|gb|EIL23368.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H11 str. CVM9545]
gi|388360145|gb|EIL24392.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H8 str. CVM9574]
gi|388373837|gb|EIL37065.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
O26:H11 str. CVM10026]
gi|388379093|gb|EIL41784.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CVM9942]
gi|388396793|gb|EIL57863.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 541-15]
gi|388399177|gb|EIL59979.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 541-1]
gi|388416628|gb|EIL76509.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli CUMT8]
gi|391281975|gb|EIQ40612.1| sensor kinase protein RcsC [Shigella sonnei 3226-85]
gi|391284582|gb|EIQ43177.1| sensor kinase protein RcsC [Shigella sonnei 3233-85]
gi|391293997|gb|EIQ52256.1| his Kinase A domain protein [Shigella sonnei 4822-66]
gi|391304994|gb|EIQ62789.1| sensor kinase protein RcsC [Escherichia coli EPECa12]
gi|394387105|gb|EJE64575.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H8 str. CVM9602]
gi|394391862|gb|EJE68691.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H8 str. CVM9634]
gi|394401471|gb|EJE77284.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O26:H11 str. CVM10021]
gi|394405229|gb|EJE80464.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H11 str. CVM9553]
gi|394412397|gb|EJE86532.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H11 str. CVM9455]
gi|397784787|gb|EJK95640.1| sensor kinase protein rcsC [Escherichia coli STEC_O31]
gi|397899441|gb|EJL15815.1| his Kinase A domain protein [Shigella sonnei str. Moseley]
gi|406776936|gb|AFS56360.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407053524|gb|AFS73575.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O104:H4 str. 2011C-3493]
gi|407066145|gb|AFS87192.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408228572|gb|EKI52106.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
N1]
gi|421938227|gb|EKT95814.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H8 str. CFSAN001632]
gi|421949200|gb|EKU06189.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O111:H11 str. CFSAN001630]
gi|429346214|gb|EKY82995.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02033-1]
gi|429348966|gb|EKY85722.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02092]
gi|429361188|gb|EKY97845.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02030]
gi|429362619|gb|EKY99266.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02093]
gi|429362890|gb|EKY99535.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02281]
gi|429366008|gb|EKZ02620.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02318]
gi|429376863|gb|EKZ13391.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-02913]
gi|429379337|gb|EKZ15838.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-03439]
gi|429380905|gb|EKZ17394.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-03943]
gi|429393126|gb|EKZ29525.1| sensor kinase RcsC [Escherichia coli O104:H4 str. 11-04080]
gi|429405227|gb|EKZ41493.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-4984]
gi|429406993|gb|EKZ43247.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-9990]
gi|429410741|gb|EKZ46962.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-9450]
gi|429414453|gb|EKZ50628.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-4987]
gi|429421062|gb|EKZ57184.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-4986]
gi|429429396|gb|EKZ65465.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-5604]
gi|429432083|gb|EKZ68123.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-4988]
gi|429436289|gb|EKZ72305.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-5603]
gi|429438494|gb|EKZ74487.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-6006]
gi|429448116|gb|EKZ84033.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec12-0465]
gi|429451834|gb|EKZ87722.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec11-9941]
gi|429457778|gb|EKZ93616.1| sensor kinase RcsC [Escherichia coli O104:H4 str. Ec12-0466]
gi|430898689|gb|ELC20822.1| sensor kinase RcsC [Escherichia coli KTE12]
gi|430979771|gb|ELC96536.1| sensor kinase RcsC [Escherichia coli KTE193]
gi|431006962|gb|ELD21931.1| sensor kinase RcsC [Escherichia coli KTE210]
gi|431213870|gb|ELF11725.1| sensor kinase RcsC [Escherichia coli KTE142]
gi|431354521|gb|ELG41247.1| sensor kinase RcsC [Escherichia coli KTE91]
gi|431362640|gb|ELG49218.1| sensor kinase RcsC [Escherichia coli KTE101]
gi|431376218|gb|ELG61541.1| sensor kinase RcsC [Escherichia coli KTE135]
gi|431385567|gb|ELG69554.1| sensor kinase RcsC [Escherichia coli KTE136]
gi|431404851|gb|ELG88097.1| sensor kinase RcsC [Escherichia coli KTE146]
gi|431453181|gb|ELH33591.1| sensor kinase RcsC [Escherichia coli KTE184]
gi|431471444|gb|ELH51337.1| sensor kinase RcsC [Escherichia coli KTE203]
gi|431551066|gb|ELI25053.1| sensor kinase RcsC [Escherichia coli KTE112]
gi|431609939|gb|ELI79244.1| sensor kinase RcsC [Escherichia coli KTE138]
gi|431645587|gb|ELJ13131.1| sensor kinase RcsC [Escherichia coli KTE163]
gi|431656130|gb|ELJ23151.1| sensor kinase RcsC [Escherichia coli KTE166]
gi|431715750|gb|ELJ79895.1| sensor kinase RcsC [Escherichia coli KTE90]
gi|443422806|gb|AGC87710.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli APEC O78]
gi|449317628|gb|EMD07713.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O08]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|161950145|ref|YP_402525.2| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Shigella dysenteriae Sd197]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|152991089|ref|YP_001356811.1| two-component sensor histidine kinase/response regulator
[Nitratiruptor sp. SB155-2]
gi|151422950|dbj|BAF70454.1| two-component sensor histidine kinase/response regulator
[Nitratiruptor sp. SB155-2]
Length = 1044
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 73/122 (59%), Gaps = 6/122 (4%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALV +D+ + +++ L+ +G V++A NG EA + R + I+F+D++MP+MDG+E
Sbjct: 776 ALVAEDNTINQKLIKKTLEDLGLTVDLANNGLEAFEK-RKNGDYDIIFMDIQMPIMDGVE 834
Query: 89 ATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
AT + + ES I+ +T+ + +RE ++ G+D TKPL ++V +L++
Sbjct: 835 ATHEILEYEEESNQPHIPIIALTAHALKGDRERYINEGMDEYITKPLIKNELVAILKKFL 894
Query: 144 KN 145
K+
Sbjct: 895 KD 896
>gi|157161702|ref|YP_001459020.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli HS]
gi|170019468|ref|YP_001724422.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli ATCC 8739]
gi|432370458|ref|ZP_19613544.1| sensor kinase RcsC [Escherichia coli KTE10]
gi|432486025|ref|ZP_19727940.1| sensor kinase RcsC [Escherichia coli KTE212]
gi|432526995|ref|ZP_19764088.1| sensor kinase RcsC [Escherichia coli KTE233]
gi|433174140|ref|ZP_20358665.1| sensor kinase RcsC [Escherichia coli KTE232]
gi|157067382|gb|ABV06637.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
HS]
gi|169754396|gb|ACA77095.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
ATCC 8739]
gi|430884670|gb|ELC07605.1| sensor kinase RcsC [Escherichia coli KTE10]
gi|431015234|gb|ELD28789.1| sensor kinase RcsC [Escherichia coli KTE212]
gi|431063254|gb|ELD72503.1| sensor kinase RcsC [Escherichia coli KTE233]
gi|431691884|gb|ELJ57329.1| sensor kinase RcsC [Escherichia coli KTE232]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|218554787|ref|YP_002387700.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli IAI1]
gi|218695831|ref|YP_002403498.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 55989]
gi|260844821|ref|YP_003222599.1| hybrid sensory kinase RcsC in two-component regulatory system with
RcsB and YojN [Escherichia coli O103:H2 str. 12009]
gi|300818176|ref|ZP_07098388.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 107-1]
gi|300822674|ref|ZP_07102812.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 119-7]
gi|300926329|ref|ZP_07142129.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 182-1]
gi|301328715|ref|ZP_07221768.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 78-1]
gi|309793104|ref|ZP_07687532.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 145-7]
gi|415813355|ref|ZP_11505164.1| sensor kinase protein rcsC [Escherichia coli LT-68]
gi|415822909|ref|ZP_11511428.1| sensor kinase protein rcsC [Escherichia coli OK1180]
gi|419350300|ref|ZP_13891638.1| his Kinase A domain protein [Escherichia coli DEC13B]
gi|420391952|ref|ZP_14891205.1| his Kinase A domain protein [Escherichia coli EPEC C342-62]
gi|422350985|ref|ZP_16431831.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 117-3]
gi|427805357|ref|ZP_18972424.1| sensor for ctr capsule biosynthesis [Escherichia coli chi7122]
gi|427809915|ref|ZP_18976980.1| sensor for ctr capsule biosynthesis, probable histidine kinase
acting on RcsB [Escherichia coli]
gi|73856217|gb|AAZ88924.1| sensor for ctr capsule biosynthesis [Shigella sonnei Ss046]
gi|218352563|emb|CAU98342.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli 55989]
gi|218361555|emb|CAQ99146.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli IAI1]
gi|257759968|dbj|BAI31465.1| hybrid sensory kinase RcsC in two-component regulatory system with
RcsB and YojN [Escherichia coli O103:H2 str. 12009]
gi|300417606|gb|EFK00917.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 182-1]
gi|300524874|gb|EFK45943.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 119-7]
gi|300529320|gb|EFK50382.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 107-1]
gi|300844863|gb|EFK72623.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 78-1]
gi|308123390|gb|EFO60652.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 145-7]
gi|323171896|gb|EFZ57540.1| sensor kinase protein rcsC [Escherichia coli LT-68]
gi|323176864|gb|EFZ62454.1| sensor kinase protein rcsC [Escherichia coli OK1180]
gi|324020897|gb|EGB90116.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Escherichia coli MS 117-3]
gi|378200478|gb|EHX60933.1| his Kinase A domain protein [Escherichia coli DEC13B]
gi|391312633|gb|EIQ70241.1| his Kinase A domain protein [Escherichia coli EPEC C342-62]
gi|412963539|emb|CCK47464.1| sensor for ctr capsule biosynthesis [Escherichia coli chi7122]
gi|412970094|emb|CCJ44737.1| sensor for ctr capsule biosynthesis, probable histidine kinase
acting on RcsB [Escherichia coli]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|432765615|ref|ZP_20000053.1| sensor kinase RcsC [Escherichia coli KTE48]
gi|431309790|gb|ELF97983.1| sensor kinase RcsC [Escherichia coli KTE48]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|432671291|ref|ZP_19906820.1| sensor kinase RcsC [Escherichia coli KTE119]
gi|431210210|gb|ELF08272.1| sensor kinase RcsC [Escherichia coli KTE119]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|425423037|ref|ZP_18804205.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
0.1288]
gi|408343592|gb|EKJ57986.1| integral membrane sensor hybrid histidine kinase [Escherichia coli
0.1288]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|424141768|ref|ZP_17873681.1| response regulator [Escherichia coli PA14]
gi|390701869|gb|EIN76087.1| response regulator [Escherichia coli PA14]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|419329642|ref|ZP_13871246.1| sensor kinase protein RcsC [Escherichia coli DEC12C]
gi|378169958|gb|EHX30844.1| sensor kinase protein RcsC [Escherichia coli DEC12C]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|419175709|ref|ZP_13719547.1| his Kinase A domain protein [Escherichia coli DEC7B]
gi|378033112|gb|EHV95692.1| his Kinase A domain protein [Escherichia coli DEC7B]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|374317230|ref|YP_005063658.1| CheY-like receiver domain-containing protein [Sphaerochaeta
pleomorpha str. Grapes]
gi|359352874|gb|AEV30648.1| CheY-like receiver domain-containing protein [Sphaerochaeta
pleomorpha str. Grapes]
Length = 365
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 68/115 (59%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+P+ R + ++L+ +GF + A +GKEA+ L + H++ +D+ MPVMDG EA
Sbjct: 158 LVVDDNPINRELLKIMLEPIGFSLLEAADGKEAIALCKR-MHPHLILMDLRMPVMDGYEA 216
Query: 90 TKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T + AM ++ I+ VT+ E + E +++G D +KP ++ + EL
Sbjct: 217 TSFINAMNGDAHVPIIAVTASAFEDDEEAVLKSGFDGYVSKPFKRGSLLKEVAEL 271
>gi|331663724|ref|ZP_08364634.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli TA143]
gi|387607910|ref|YP_006096766.1| two-component system sensor kinase [Escherichia coli 042]
gi|284922210|emb|CBG35292.1| two-component system sensor kinase [Escherichia coli 042]
gi|331059523|gb|EGI31500.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli TA143]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|87120676|ref|ZP_01076569.1| hypothetical protein MED121_18085 [Marinomonas sp. MED121]
gi|86163904|gb|EAQ65176.1| hypothetical protein MED121_18085 [Marinomonas sp. MED121]
Length = 351
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 69/118 (58%), Gaps = 1/118 (0%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
S++R L DD+P R++ +L+ +G KV AENG+ A++ +F ++F+D++M
Sbjct: 131 SESRIKHILCADDNPDNRQVIKALLEKMGHKVSTAENGQLALEA-TLEQEFDLIFLDIQM 189
Query: 82 PVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
PVMDG+EA + MR+ E+ ++ T++ + E ++ G + KP+ K+ +L
Sbjct: 190 PVMDGMEALELMRSTACETPVIAFTAQVFDHEVSQLLELGFNAWLAKPIDRKKLNEIL 247
>gi|334131187|ref|ZP_08504953.1| Putative histidine kinase [Methyloversatilis universalis FAM5]
gi|333443817|gb|EGK71778.1| Putative histidine kinase [Methyloversatilis universalis FAM5]
Length = 665
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 41/131 (31%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
+E A ++ + R L+V+D P+ +++ +++L+ G +V VA NG EA++
Sbjct: 512 SEAAPAATPVEPERGETATGRRLSVLLVEDHPVNQKVATVVLQRAGHRVTVAHNGIEAIE 571
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQ 119
G F +V +DM+MPVM G+EA + +R M+ E I +T+ E +R ++
Sbjct: 572 KVAEGG-FDLVLMDMQMPVMGGVEAARLIRQMEEELGRLPVPIFAMTANAQEEDRTACLE 630
Query: 120 AGLDLCYTKPL 130
AG++ TKPL
Sbjct: 631 AGMNDFLTKPL 641
>gi|424539153|ref|ZP_17982122.1| response regulator [Escherichia coli EC4013]
gi|390865896|gb|EIP27890.1| response regulator [Escherichia coli EC4013]
Length = 933
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|161984916|ref|YP_408495.2| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Shigella boydii Sb227]
gi|416296637|ref|ZP_11651497.1| Two-component sensor protein RcsC [Shigella flexneri CDC 796-83]
gi|417683009|ref|ZP_12332362.1| sensor kinase protein rcsC [Shigella boydii 3594-74]
gi|320185893|gb|EFW60643.1| Two-component sensor protein RcsC [Shigella flexneri CDC 796-83]
gi|332093693|gb|EGI98751.1| sensor kinase protein rcsC [Shigella boydii 3594-74]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|157154824|ref|YP_001463571.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli E24377A]
gi|157076854|gb|ABV16562.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
E24377A]
Length = 949
Score = 72.0 bits (175), Expect = 7e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|418048958|ref|ZP_12687045.1| two component transcriptional regulator, winged helix family
[Mycobacterium rhodesiae JS60]
gi|353189863|gb|EHB55373.1| two component transcriptional regulator, winged helix family
[Mycobacterium rhodesiae JS60]
Length = 239
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 15 RISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI 74
R+ + P + L+VDDDP +R + L+ GF V VA GKEA+ L
Sbjct: 2 RVGQQPAQEGAGRTVLMVDDDPDVRTSVARGLRHSGFDVRVAATGKEALRLL-ANENHDA 60
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
+ +D++MP +DG+ A+RA+ + I +++R++ +R ++AG D TKP + +
Sbjct: 61 LVLDVQMPELDGVAVVTALRALGNDIPICVLSARDTVNDRIAGLEAGADDYLTKPFDLGE 120
Query: 135 IVPLLEELQK 144
+V L L +
Sbjct: 121 LVARLHALLR 130
>gi|227114441|ref|ZP_03828097.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
Length = 928
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 71/131 (54%), Gaps = 7/131 (5%)
Query: 8 ASSSKKARISENPV------SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+ S + RI +P ++N LVVDD P+ RR+ + L S+G++ A +G +
Sbjct: 777 SESEDRHRIEISPPLTSYVRAENGDIMILVVDDHPINRRLLADQLSSLGYQAMTANDGVD 836
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+ + + +IV D+ MP MDG T+ MR + ++GVT+ ERE + AG
Sbjct: 837 ALGVL-SKNHINIVLTDVNMPNMDGYLFTRRMREQGLRFPVIGVTANALAEERERCLGAG 895
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 896 MDHCLSKPVTL 906
>gi|424154073|ref|ZP_17885049.1| response regulator [Escherichia coli PA24]
gi|390724662|gb|EIN97211.1| response regulator [Escherichia coli PA24]
Length = 949
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|419376154|ref|ZP_13917178.1| his Kinase A domain protein [Escherichia coli DEC14B]
gi|419386795|ref|ZP_13927673.1| his Kinase A domain protein [Escherichia coli DEC14D]
gi|378218877|gb|EHX79146.1| his Kinase A domain protein [Escherichia coli DEC14B]
gi|378231322|gb|EHX91433.1| his Kinase A domain protein [Escherichia coli DEC14D]
Length = 949
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417688607|ref|ZP_12337848.1| sensor kinase protein rcsC [Shigella boydii 5216-82]
gi|332093154|gb|EGI98214.1| sensor kinase protein rcsC [Shigella boydii 5216-82]
Length = 949
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|209765618|gb|ACI81121.1| sensor for ctr capsule biosynthesis [Escherichia coli]
Length = 933
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|161367569|ref|NP_288798.2| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. EDL933]
gi|162139775|ref|NP_311134.2| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. Sakai]
gi|168749626|ref|ZP_02774648.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4113]
gi|168754970|ref|ZP_02779977.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4401]
gi|168767843|ref|ZP_02792850.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4486]
gi|168773059|ref|ZP_02798066.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4196]
gi|168780072|ref|ZP_02805079.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4076]
gi|168787129|ref|ZP_02812136.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC869]
gi|168798388|ref|ZP_02823395.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC508]
gi|195935599|ref|ZP_03080981.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. EC4024]
gi|208807530|ref|ZP_03249867.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4206]
gi|208813546|ref|ZP_03254875.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4045]
gi|208818558|ref|ZP_03258878.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4042]
gi|209396281|ref|YP_002271632.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. EC4115]
gi|254794118|ref|YP_003078955.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. TW14359]
gi|261223323|ref|ZP_05937604.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. FRIK2000]
gi|261259127|ref|ZP_05951660.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. FRIK966]
gi|291283469|ref|YP_003500287.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O55:H7 str. CB9615]
gi|387507607|ref|YP_006159863.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O55:H7 str. RM12579]
gi|387883438|ref|YP_006313740.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli Xuzhou21]
gi|416310894|ref|ZP_11656629.1| Two-component sensor protein RcsC [Escherichia coli O157:H7 str.
1044]
gi|416318208|ref|ZP_11660918.1| Two-component sensor protein RcsC [Escherichia coli O157:H7 str.
EC1212]
gi|416330563|ref|ZP_11669513.1| Two-component sensor protein RcsC [Escherichia coli O157:H7 str.
1125]
gi|416775502|ref|ZP_11874342.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. G5101]
gi|416809168|ref|ZP_11888855.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O55:H7 str. 3256-97]
gi|416819690|ref|ZP_11893412.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O55:H7 str. USDA 5905]
gi|416830560|ref|ZP_11898700.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. LSU-61]
gi|419046219|ref|ZP_13593156.1| his Kinase A domain protein [Escherichia coli DEC3A]
gi|419057968|ref|ZP_13604773.1| his Kinase A domain protein [Escherichia coli DEC3C]
gi|419063436|ref|ZP_13610164.1| his Kinase A domain protein [Escherichia coli DEC3D]
gi|419070332|ref|ZP_13615955.1| his Kinase A domain protein [Escherichia coli DEC3E]
gi|419081425|ref|ZP_13626873.1| his Kinase A domain protein [Escherichia coli DEC4A]
gi|419087199|ref|ZP_13632556.1| his Kinase A domain protein [Escherichia coli DEC4B]
gi|419093421|ref|ZP_13638706.1| his Kinase A domain protein [Escherichia coli DEC4C]
gi|419098960|ref|ZP_13644159.1| his Kinase A domain protein [Escherichia coli DEC4D]
gi|419104786|ref|ZP_13649915.1| his Kinase A domain protein [Escherichia coli DEC4E]
gi|419110244|ref|ZP_13655302.1| his Kinase A domain protein [Escherichia coli DEC4F]
gi|419121185|ref|ZP_13666142.1| his Kinase A domain protein [Escherichia coli DEC5B]
gi|419126814|ref|ZP_13671699.1| his Kinase A domain protein [Escherichia coli DEC5C]
gi|419137271|ref|ZP_13682067.1| sensor kinase protein RcsC [Escherichia coli DEC5E]
gi|420287591|ref|ZP_14789782.1| response regulator [Escherichia coli TW10246]
gi|420293177|ref|ZP_14795300.1| response regulator [Escherichia coli TW11039]
gi|420304944|ref|ZP_14806940.1| response regulator [Escherichia coli TW10119]
gi|420310426|ref|ZP_14812359.1| response regulator [Escherichia coli EC1738]
gi|420316053|ref|ZP_14817929.1| response regulator [Escherichia coli EC1734]
gi|421813143|ref|ZP_16248867.1| response regulator [Escherichia coli 8.0416]
gi|421819029|ref|ZP_16254527.1| sensor kinase protein RcsC [Escherichia coli 10.0821]
gi|421824854|ref|ZP_16260221.1| response regulator [Escherichia coli FRIK920]
gi|424084710|ref|ZP_17821220.1| response regulator [Escherichia coli FDA517]
gi|424091193|ref|ZP_17827138.1| response regulator [Escherichia coli FRIK1996]
gi|424103968|ref|ZP_17838767.1| response regulator [Escherichia coli FRIK1990]
gi|424128913|ref|ZP_17861837.1| response regulator [Escherichia coli PA9]
gi|424247898|ref|ZP_17890533.1| response regulator [Escherichia coli PA25]
gi|424324433|ref|ZP_17896454.1| response regulator [Escherichia coli PA28]
gi|424463040|ref|ZP_17913519.1| response regulator [Escherichia coli PA39]
gi|424475945|ref|ZP_17925288.1| response regulator [Escherichia coli PA42]
gi|424481696|ref|ZP_17930695.1| response regulator [Escherichia coli TW07945]
gi|424487844|ref|ZP_17936432.1| response regulator [Escherichia coli TW09098]
gi|424494435|ref|ZP_17942208.1| response regulator [Escherichia coli TW09195]
gi|424501215|ref|ZP_17948139.1| response regulator [Escherichia coli EC4203]
gi|424507447|ref|ZP_17953877.1| response regulator [Escherichia coli EC4196]
gi|424514771|ref|ZP_17959487.1| response regulator [Escherichia coli TW14313]
gi|424521093|ref|ZP_17965236.1| response regulator [Escherichia coli TW14301]
gi|424526929|ref|ZP_17970663.1| response regulator [Escherichia coli EC4421]
gi|424545174|ref|ZP_17987623.1| response regulator [Escherichia coli EC4402]
gi|424551429|ref|ZP_17993313.1| response regulator [Escherichia coli EC4439]
gi|424563961|ref|ZP_18004981.1| response regulator [Escherichia coli EC4437]
gi|425104941|ref|ZP_18507270.1| sensor kinase protein RcsC [Escherichia coli 5.2239]
gi|425110861|ref|ZP_18512796.1| response regulator [Escherichia coli 6.0172]
gi|425132558|ref|ZP_18533422.1| sensor kinase protein RcsC [Escherichia coli 8.2524]
gi|425139027|ref|ZP_18539433.1| response regulator [Escherichia coli 10.0833]
gi|425163254|ref|ZP_18562149.1| response regulator [Escherichia coli FDA506]
gi|425168920|ref|ZP_18567419.1| response regulator [Escherichia coli FDA507]
gi|425181084|ref|ZP_18578790.1| response regulator [Escherichia coli FRIK1999]
gi|425194119|ref|ZP_18590902.1| response regulator [Escherichia coli NE1487]
gi|425200553|ref|ZP_18596783.1| response regulator [Escherichia coli NE037]
gi|425231675|ref|ZP_18625724.1| response regulator [Escherichia coli PA45]
gi|425237592|ref|ZP_18631322.1| response regulator [Escherichia coli TT12B]
gi|425243811|ref|ZP_18637131.1| response regulator [Escherichia coli MA6]
gi|425249933|ref|ZP_18642884.1| response regulator [Escherichia coli 5905]
gi|425255793|ref|ZP_18648328.1| response regulator [Escherichia coli CB7326]
gi|425262011|ref|ZP_18654041.1| response regulator [Escherichia coli EC96038]
gi|425295481|ref|ZP_18685701.1| response regulator [Escherichia coli PA38]
gi|425312150|ref|ZP_18701352.1| response regulator [Escherichia coli EC1735]
gi|425318097|ref|ZP_18706907.1| response regulator [Escherichia coli EC1736]
gi|425324198|ref|ZP_18712588.1| response regulator [Escherichia coli EC1737]
gi|425336646|ref|ZP_18724053.1| response regulator [Escherichia coli EC1847]
gi|425348854|ref|ZP_18735353.1| response regulator [Escherichia coli EC1849]
gi|425355151|ref|ZP_18741241.1| response regulator [Escherichia coli EC1850]
gi|425361111|ref|ZP_18746784.1| response regulator [Escherichia coli EC1856]
gi|425367281|ref|ZP_18752479.1| response regulator [Escherichia coli EC1862]
gi|425373656|ref|ZP_18758322.1| response regulator [Escherichia coli EC1864]
gi|425386503|ref|ZP_18770083.1| response regulator [Escherichia coli EC1866]
gi|425393226|ref|ZP_18776356.1| response regulator [Escherichia coli EC1868]
gi|425399323|ref|ZP_18782053.1| response regulator [Escherichia coli EC1869]
gi|425405402|ref|ZP_18787658.1| response regulator [Escherichia coli EC1870]
gi|425411807|ref|ZP_18793598.1| response regulator [Escherichia coli NE098]
gi|425418138|ref|ZP_18799432.1| response regulator [Escherichia coli FRIK523]
gi|425429467|ref|ZP_18810093.1| response regulator [Escherichia coli 0.1304]
gi|428953938|ref|ZP_19025753.1| sensor kinase protein RcsC [Escherichia coli 88.1042]
gi|428966444|ref|ZP_19037222.1| sensor kinase protein RcsC [Escherichia coli 90.0091]
gi|428972382|ref|ZP_19042744.1| sensor kinase protein RcsC [Escherichia coli 90.0039]
gi|428978801|ref|ZP_19048644.1| sensor kinase protein RcsC [Escherichia coli 90.2281]
gi|428984477|ref|ZP_19053889.1| sensor kinase protein RcsC [Escherichia coli 93.0055]
gi|429002737|ref|ZP_19070898.1| sensor kinase protein RcsC [Escherichia coli 95.0183]
gi|429015322|ref|ZP_19082243.1| sensor kinase protein RcsC [Escherichia coli 95.0943]
gi|429021287|ref|ZP_19087826.1| sensor kinase protein RcsC [Escherichia coli 96.0428]
gi|429039592|ref|ZP_19104725.1| sensor kinase protein RcsC [Escherichia coli 96.0932]
gi|429045413|ref|ZP_19110144.1| sensor kinase protein RcsC [Escherichia coli 96.0107]
gi|429056225|ref|ZP_19120575.1| sensor kinase protein RcsC [Escherichia coli 97.1742]
gi|444925763|ref|ZP_21245079.1| sensor kinase protein RcsC [Escherichia coli 09BKT078844]
gi|444931468|ref|ZP_21250525.1| sensor kinase protein RcsC [Escherichia coli 99.0814]
gi|444936877|ref|ZP_21255672.1| sensor kinase protein RcsC [Escherichia coli 99.0815]
gi|444942504|ref|ZP_21261040.1| sensor kinase protein RcsC [Escherichia coli 99.0816]
gi|444959064|ref|ZP_21276933.1| sensor kinase protein RcsC [Escherichia coli 99.1753]
gi|444966767|ref|ZP_21284282.1| sensor kinase protein RcsC [Escherichia coli 99.1775]
gi|444975455|ref|ZP_21292601.1| sensor kinase protein RcsC [Escherichia coli 99.1805]
gi|444980928|ref|ZP_21297847.1| sensor kinase protein RcsC [Escherichia coli ATCC 700728]
gi|444996886|ref|ZP_21313397.1| sensor kinase protein RcsC [Escherichia coli PA13]
gi|445002441|ref|ZP_21318841.1| sensor kinase protein RcsC [Escherichia coli PA2]
gi|445007941|ref|ZP_21324194.1| sensor kinase protein RcsC [Escherichia coli PA47]
gi|445012974|ref|ZP_21329092.1| sensor kinase protein RcsC [Escherichia coli PA48]
gi|445024358|ref|ZP_21340193.1| sensor kinase protein RcsC [Escherichia coli 7.1982]
gi|445029632|ref|ZP_21345320.1| sensor kinase protein RcsC [Escherichia coli 99.1781]
gi|445035094|ref|ZP_21350636.1| sensor kinase protein RcsC [Escherichia coli 99.1762]
gi|445045917|ref|ZP_21361181.1| sensor kinase protein RcsC [Escherichia coli 3.4880]
gi|445051489|ref|ZP_21366553.1| sensor kinase protein RcsC [Escherichia coli 95.0083]
gi|445057250|ref|ZP_21372120.1| sensor kinase protein RcsC [Escherichia coli 99.0670]
gi|452971971|ref|ZP_21970198.1| sensory histidine kinase [Escherichia coli O157:H7 str. EC4009]
gi|187771011|gb|EDU34855.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4196]
gi|188016099|gb|EDU54221.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4113]
gi|189002160|gb|EDU71146.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4076]
gi|189357730|gb|EDU76149.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4401]
gi|189362893|gb|EDU81312.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4486]
gi|189372926|gb|EDU91342.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC869]
gi|189379027|gb|EDU97443.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC508]
gi|208727331|gb|EDZ76932.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4206]
gi|208734823|gb|EDZ83510.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4045]
gi|208738681|gb|EDZ86363.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4042]
gi|209157681|gb|ACI35114.1| sensor histidine kinase/response regulator RcsC [Escherichia coli
O157:H7 str. EC4115]
gi|254593518|gb|ACT72879.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. TW14359]
gi|290763342|gb|ADD57303.1| Sensor histidine kinase/response regulator RcsC [Escherichia coli
O55:H7 str. CB9615]
gi|320192155|gb|EFW66800.1| Two-component sensor protein RcsC [Escherichia coli O157:H7 str.
EC1212]
gi|320641047|gb|EFX10526.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. G5101]
gi|320657656|gb|EFX25454.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O55:H7 str. 3256-97 TW 07815]
gi|320663112|gb|EFX30425.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O55:H7 str. USDA 5905]
gi|320668012|gb|EFX34915.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H7 str. LSU-61]
gi|326339572|gb|EGD63383.1| Two-component sensor protein RcsC [Escherichia coli O157:H7 str.
1125]
gi|326344033|gb|EGD67794.1| Two-component sensor protein RcsC [Escherichia coli O157:H7 str.
1044]
gi|374359601|gb|AEZ41308.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O55:H7 str. RM12579]
gi|377893049|gb|EHU57488.1| his Kinase A domain protein [Escherichia coli DEC3A]
gi|377904555|gb|EHU68833.1| his Kinase A domain protein [Escherichia coli DEC3C]
gi|377909911|gb|EHU74109.1| his Kinase A domain protein [Escherichia coli DEC3D]
gi|377912162|gb|EHU76325.1| his Kinase A domain protein [Escherichia coli DEC3E]
gi|377926055|gb|EHU89990.1| his Kinase A domain protein [Escherichia coli DEC4A]
gi|377930389|gb|EHU94272.1| his Kinase A domain protein [Escherichia coli DEC4B]
gi|377941863|gb|EHV05600.1| his Kinase A domain protein [Escherichia coli DEC4C]
gi|377942070|gb|EHV05806.1| his Kinase A domain protein [Escherichia coli DEC4D]
gi|377947269|gb|EHV10936.1| his Kinase A domain protein [Escherichia coli DEC4E]
gi|377957126|gb|EHV20662.1| his Kinase A domain protein [Escherichia coli DEC4F]
gi|377966906|gb|EHV30315.1| his Kinase A domain protein [Escherichia coli DEC5B]
gi|377974926|gb|EHV38251.1| his Kinase A domain protein [Escherichia coli DEC5C]
gi|377984264|gb|EHV47499.1| sensor kinase protein RcsC [Escherichia coli DEC5E]
gi|386796896|gb|AFJ29930.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli Xuzhou21]
gi|390641630|gb|EIN21054.1| response regulator [Escherichia coli FRIK1996]
gi|390643191|gb|EIN22554.1| response regulator [Escherichia coli FDA517]
gi|390664190|gb|EIN41652.1| response regulator [Escherichia coli FRIK1990]
gi|390683893|gb|EIN59545.1| response regulator [Escherichia coli PA9]
gi|390723049|gb|EIN95669.1| response regulator [Escherichia coli PA25]
gi|390727946|gb|EIO00329.1| response regulator [Escherichia coli PA28]
gi|390769048|gb|EIO38004.1| response regulator [Escherichia coli PA39]
gi|390769519|gb|EIO38446.1| response regulator [Escherichia coli PA42]
gi|390790348|gb|EIO57776.1| response regulator [Escherichia coli TW10246]
gi|390791397|gb|EIO58788.1| response regulator [Escherichia coli TW07945]
gi|390797263|gb|EIO64519.1| response regulator [Escherichia coli TW11039]
gi|390806622|gb|EIO73525.1| response regulator [Escherichia coli TW09098]
gi|390815966|gb|EIO82478.1| response regulator [Escherichia coli TW10119]
gi|390826234|gb|EIO92090.1| response regulator [Escherichia coli EC4203]
gi|390830776|gb|EIO96271.1| response regulator [Escherichia coli TW09195]
gi|390831694|gb|EIO97062.1| response regulator [Escherichia coli EC4196]
gi|390846285|gb|EIP09889.1| response regulator [Escherichia coli TW14301]
gi|390847300|gb|EIP10848.1| response regulator [Escherichia coli TW14313]
gi|390850877|gb|EIP14218.1| response regulator [Escherichia coli EC4421]
gi|390871098|gb|EIP32540.1| response regulator [Escherichia coli EC4402]
gi|390878911|gb|EIP39721.1| response regulator [Escherichia coli EC4439]
gi|390893938|gb|EIP53472.1| response regulator [Escherichia coli EC4437]
gi|390899705|gb|EIP58941.1| response regulator [Escherichia coli EC1738]
gi|390908043|gb|EIP66884.1| response regulator [Escherichia coli EC1734]
gi|408067906|gb|EKH02334.1| response regulator [Escherichia coli FRIK920]
gi|408078842|gb|EKH12970.1| response regulator [Escherichia coli FDA506]
gi|408083152|gb|EKH17070.1| response regulator [Escherichia coli FDA507]
gi|408097524|gb|EKH30415.1| response regulator [Escherichia coli FRIK1999]
gi|408108460|gb|EKH40463.1| response regulator [Escherichia coli NE1487]
gi|408115276|gb|EKH46742.1| response regulator [Escherichia coli NE037]
gi|408146076|gb|EKH75219.1| response regulator [Escherichia coli PA45]
gi|408155433|gb|EKH83756.1| response regulator [Escherichia coli TT12B]
gi|408160090|gb|EKH88134.1| response regulator [Escherichia coli MA6]
gi|408164100|gb|EKH91940.1| response regulator [Escherichia coli 5905]
gi|408173566|gb|EKI00586.1| response regulator [Escherichia coli CB7326]
gi|408180678|gb|EKI07283.1| response regulator [Escherichia coli EC96038]
gi|408218039|gb|EKI42273.1| response regulator [Escherichia coli PA38]
gi|408227653|gb|EKI51235.1| response regulator [Escherichia coli EC1735]
gi|408238695|gb|EKI61481.1| response regulator [Escherichia coli EC1736]
gi|408243167|gb|EKI65711.1| response regulator [Escherichia coli EC1737]
gi|408256627|gb|EKI78002.1| response regulator [Escherichia coli EC1847]
gi|408265721|gb|EKI86403.1| response regulator [Escherichia coli EC1849]
gi|408274989|gb|EKI94971.1| response regulator [Escherichia coli EC1850]
gi|408277307|gb|EKI97117.1| response regulator [Escherichia coli EC1856]
gi|408287141|gb|EKJ06037.1| response regulator [Escherichia coli EC1862]
gi|408291309|gb|EKJ09943.1| response regulator [Escherichia coli EC1864]
gi|408308303|gb|EKJ25573.1| response regulator [Escherichia coli EC1868]
gi|408308510|gb|EKJ25779.1| response regulator [Escherichia coli EC1866]
gi|408319518|gb|EKJ35654.1| response regulator [Escherichia coli EC1869]
gi|408326111|gb|EKJ41940.1| response regulator [Escherichia coli EC1870]
gi|408326975|gb|EKJ42744.1| response regulator [Escherichia coli NE098]
gi|408336923|gb|EKJ51671.1| response regulator [Escherichia coli FRIK523]
gi|408346720|gb|EKJ61006.1| response regulator [Escherichia coli 0.1304]
gi|408550097|gb|EKK27442.1| sensor kinase protein RcsC [Escherichia coli 5.2239]
gi|408551111|gb|EKK28398.1| response regulator [Escherichia coli 6.0172]
gi|408579925|gb|EKK55373.1| response regulator [Escherichia coli 10.0833]
gi|408581563|gb|EKK56898.1| sensor kinase protein RcsC [Escherichia coli 8.2524]
gi|408601449|gb|EKK75252.1| response regulator [Escherichia coli 8.0416]
gi|408612786|gb|EKK86120.1| sensor kinase protein RcsC [Escherichia coli 10.0821]
gi|427205087|gb|EKV75347.1| sensor kinase protein RcsC [Escherichia coli 88.1042]
gi|427222261|gb|EKV91053.1| sensor kinase protein RcsC [Escherichia coli 90.0091]
gi|427224584|gb|EKV93289.1| sensor kinase protein RcsC [Escherichia coli 90.2281]
gi|427228124|gb|EKV96608.1| sensor kinase protein RcsC [Escherichia coli 90.0039]
gi|427242779|gb|EKW10176.1| sensor kinase protein RcsC [Escherichia coli 93.0055]
gi|427261735|gb|EKW27652.1| sensor kinase protein RcsC [Escherichia coli 95.0183]
gi|427262298|gb|EKW28199.1| sensor kinase protein RcsC [Escherichia coli 95.0943]
gi|427276849|gb|EKW41414.1| sensor kinase protein RcsC [Escherichia coli 96.0428]
gi|427292217|gb|EKW55573.1| sensor kinase protein RcsC [Escherichia coli 96.0932]
gi|427299505|gb|EKW62476.1| sensor kinase protein RcsC [Escherichia coli 96.0107]
gi|427313488|gb|EKW75596.1| sensor kinase protein RcsC [Escherichia coli 97.1742]
gi|444538705|gb|ELV18552.1| sensor kinase protein RcsC [Escherichia coli 99.0814]
gi|444540195|gb|ELV19894.1| sensor kinase protein RcsC [Escherichia coli 09BKT078844]
gi|444547855|gb|ELV26412.1| sensor kinase protein RcsC [Escherichia coli 99.0815]
gi|444558917|gb|ELV36178.1| sensor kinase protein RcsC [Escherichia coli 99.0816]
gi|444569543|gb|ELV46125.1| sensor kinase protein RcsC [Escherichia coli 99.1775]
gi|444573583|gb|ELV49948.1| sensor kinase protein RcsC [Escherichia coli 99.1753]
gi|444593723|gb|ELV68930.1| sensor kinase protein RcsC [Escherichia coli ATCC 700728]
gi|444596232|gb|ELV71315.1| sensor kinase protein RcsC [Escherichia coli 99.1805]
gi|444607442|gb|ELV82020.1| sensor kinase protein RcsC [Escherichia coli PA13]
gi|444616300|gb|ELV90468.1| sensor kinase protein RcsC [Escherichia coli PA2]
gi|444624205|gb|ELV98110.1| sensor kinase protein RcsC [Escherichia coli PA47]
gi|444624616|gb|ELV98498.1| sensor kinase protein RcsC [Escherichia coli PA48]
gi|444639062|gb|ELW12383.1| sensor kinase protein RcsC [Escherichia coli 7.1982]
gi|444641967|gb|ELW15183.1| sensor kinase protein RcsC [Escherichia coli 99.1781]
gi|444645598|gb|ELW18660.1| sensor kinase protein RcsC [Escherichia coli 99.1762]
gi|444660214|gb|ELW32587.1| sensor kinase protein RcsC [Escherichia coli 3.4880]
gi|444665090|gb|ELW37240.1| sensor kinase protein RcsC [Escherichia coli 95.0083]
gi|444669999|gb|ELW41933.1| sensor kinase protein RcsC [Escherichia coli 99.0670]
Length = 949
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|298528571|ref|ZP_07015975.1| histidine kinase [Desulfonatronospira thiodismutans ASO3-1]
gi|298512223|gb|EFI36125.1| histidine kinase [Desulfonatronospira thiodismutans ASO3-1]
Length = 533
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +DDPM + +L G V +A+NG+EAV+L + + F V +D++MPVM G+EA
Sbjct: 402 LVAEDDPMNQIFIKNLLTKEGHNVSMAKNGREAVELVQEHS-FDCVLMDIQMPVMTGVEA 460
Query: 90 TKAMRAM-------KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R + V+ I+ VT+ +RE F+ AG+D KP+++
Sbjct: 461 TREIRNLGGNGSIRNVQIPIIAVTAHTQPGDREKFLDAGMDDYLGKPVSL 510
>gi|337278154|ref|YP_004617625.1| histidine kinase [Ramlibacter tataouinensis TTB310]
gi|334729230|gb|AEG91606.1| candidate histidine kinase, unorthodox [Ramlibacter tataouinensis
TTB310]
Length = 740
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 75/121 (61%), Gaps = 4/121 (3%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
++++P LV DD P+ RR +L+S+G +V + +NG+EA+++ +T +F V +D+ M
Sbjct: 478 ARSQPLRVLVADDHPVNRRYLGAVLRSIGHEVTLCDNGEEALEIVQTD-RFDAVLMDIHM 536
Query: 82 PVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
PVMDG+ AT+A+RA+ + +V +T+ R ++AG+ +KP+ + ++ +
Sbjct: 537 PVMDGLAATRAIRALGGRYADLPVVALTADVMPGARLQAVRAGISAFLSKPVGVEQLSAV 596
Query: 139 L 139
L
Sbjct: 597 L 597
>gi|420348103|ref|ZP_14849492.1| sensor kinase protein RcsC [Shigella boydii 965-58]
gi|391269106|gb|EIQ28018.1| sensor kinase protein RcsC [Shigella boydii 965-58]
Length = 949
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|416787157|ref|ZP_11879253.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H- str. 493-89]
gi|416798752|ref|ZP_11884170.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H- str. H 2687]
gi|419076462|ref|ZP_13621980.1| his Kinase A domain protein [Escherichia coli DEC3F]
gi|420281290|ref|ZP_14783528.1| response regulator [Escherichia coli TW06591]
gi|425268047|ref|ZP_18659691.1| response regulator [Escherichia coli 5412]
gi|320646560|gb|EFX15476.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H- str. 493-89]
gi|320651931|gb|EFX20306.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli O157:H- str. H 2687]
gi|377921503|gb|EHU85502.1| his Kinase A domain protein [Escherichia coli DEC3F]
gi|390781577|gb|EIO49254.1| response regulator [Escherichia coli TW06591]
gi|408183108|gb|EKI09582.1| response regulator [Escherichia coli 5412]
Length = 949
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 815 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|149377882|ref|ZP_01895611.1| Response regulator containing a CheY-like receiver domain and a
GGDEF domain [Marinobacter algicola DG893]
gi|149357824|gb|EDM46317.1| Response regulator containing a CheY-like receiver domain and a
GGDEF domain [Marinobacter algicola DG893]
Length = 588
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
++P+ +NRP L+ DD R I +L+ +G +VE AENG EAV++FR A IV +
Sbjct: 2 DDPLPENRPLRILIADDSDSDRLILKTLLRRLGHEVEDAENGLEAVNIFRKSAP-DIVLL 60
Query: 78 DMEMPVMDGIEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKP 129
D MPVMDG+EA + ++ + E ++ +TS + ++AG D TKP
Sbjct: 61 DALMPVMDGMEAARQIKVLAGEQLVPLIFLTSLSDAGALARCLEAGGDDFLTKP 114
>gi|119492436|ref|ZP_01623757.1| hybrid sensory kinase [Lyngbya sp. PCC 8106]
gi|119453102|gb|EAW34271.1| hybrid sensory kinase [Lyngbya sp. PCC 8106]
Length = 885
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/121 (35%), Positives = 72/121 (59%), Gaps = 6/121 (4%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVVDD+ R++ +LK +GF+V+ AENG+EA+ ++ H++F+DM MPVMDG
Sbjct: 669 YRILVVDDNWTNRQLVVKLLKPLGFEVQEAENGQEAISIWEKWQP-HLIFMDMRMPVMDG 727
Query: 87 IEATKAMRA--MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
EAT+ ++ + I+ +T+ + +R V + AG D KP ++ L E++ K
Sbjct: 728 YEATQYIKQHLQGQATVIIALTASVFQQDRTVILSAGCDDFVRKPF---RVEVLFEKISK 784
Query: 145 N 145
+
Sbjct: 785 H 785
>gi|398884675|ref|ZP_10639603.1| signal transduction histidine kinase [Pseudomonas sp. GM60]
gi|398193887|gb|EJM80979.1| signal transduction histidine kinase [Pseudomonas sp. GM60]
Length = 1099
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 15 RISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI 74
+ +E P+ P LVVDD P R + L+ +G + VAE+G+ ++ + G F +
Sbjct: 841 KAAEVPIHTTMPLNVLVVDDHPANRLLMCQQLEFLGHRFSVAEDGEAGLEAWNNGL-FDL 899
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKP 129
V +D MPVM+G E T+A+R + SK ++G T+ E QAG+D C KP
Sbjct: 900 VIVDCNMPVMNGYELTRAIRRHEQHSKRPPCTVLGFTANAQPEELLRCKQAGMDDCLFKP 959
Query: 130 LTMAKI 135
LT+ +
Sbjct: 960 LTLTAL 965
>gi|71003411|ref|XP_756386.1| hypothetical protein UM00239.1 [Ustilago maydis 521]
gi|46095823|gb|EAK81056.1| hypothetical protein UM00239.1 [Ustilago maydis 521]
Length = 1658
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 2 MIGAEGASSSKKAR-ISENPVSKN--RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAEN 58
M+G +S+++ R + PV + P L+V+D+P+ +RI SM + K +VA N
Sbjct: 1293 MMGMGFTASARRGRGPKKAPVREAVLPPIKVLIVEDNPINQRILSMFMGKKKIKYDVANN 1352
Query: 59 GKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKI 102
G+EAV+ ++TG +H++ +D+++PVMDGIEATK +R ++ + I
Sbjct: 1353 GREAVEKWKTGG-YHLILMDIQLPVMDGIEATKEIRKLERSANI 1395
>gi|373457781|ref|ZP_09549548.1| multi-sensor hybrid histidine kinase [Caldithrix abyssi DSM 13497]
gi|371719445|gb|EHO41216.1| multi-sensor hybrid histidine kinase [Caldithrix abyssi DSM 13497]
Length = 1291
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 34/120 (28%), Positives = 77/120 (64%), Gaps = 5/120 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + +R+ +++++G+KVEVA +G+EA+D+ + K+ +V +D++MPV+DG+
Sbjct: 1169 LLVEDNVINQRVAKRMVENMGYKVEVANHGQEALDMMKN-KKYDLVLLDVQMPVLDGLRT 1227
Query: 90 TKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
+ +R ++ ++ I+ +T+ + +R+ ++AG+D +KP+ M + + KN
Sbjct: 1228 AQKIRVKELNTEEHIPIIAMTAHAQKEDRDRCLEAGMDDYLSKPINMKMLEEKINHYLKN 1287
>gi|410696421|gb|AFV75489.1| putative domain HDIG-containing protein [Thermus oshimai JL-2]
Length = 316
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 61/106 (57%), Gaps = 1/106 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+P R + L +G +V A NGKEA+DL R FH+V D+ MPVMDG+E
Sbjct: 4 LVVDDEPTQRLLLMRALAPLGVEVAEARNGKEALDLLREKF-FHLVLTDLHMPVMDGLEL 62
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
+A++A ++ +T+ R ++AG D +PL +A++
Sbjct: 63 IRAVKAQDPFLPVILLTADGERETRLKGLEAGADDFLNRPLDLAEL 108
>gi|410623247|ref|ZP_11334064.1| hypothetical protein GPAL_2583 [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410157169|dbj|GAC29438.1| hypothetical protein GPAL_2583 [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 882
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 18 ENPVSKNRPYFA---LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI 74
E V+ FA L+V+D+ + + + ++KS+G ++A NGKEAV+ + +
Sbjct: 747 EQSVTPKTTKFAGHILLVEDNAINQMLMGEMIKSLGLTHDIANNGKEAVEKVEANKAYDL 806
Query: 75 VFIDMEMPVMDGIEATKAMR-AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
V +D++MPV+DGIEATK +R + IVGV++ + +R++ +++G++ TKP+
Sbjct: 807 VLMDVQMPVLDGIEATKLIRQSGNTTVPIVGVSAHAMQEDRDIALKSGMNEYLTKPI 863
>gi|420351561|ref|ZP_14852745.1| sensor kinase protein RcsC [Shigella boydii 4444-74]
gi|391287288|gb|EIQ45818.1| sensor kinase protein RcsC [Shigella boydii 4444-74]
Length = 787
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 653 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 711
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 712 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 767
>gi|303248462|ref|ZP_07334721.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans
JJ]
gi|302490173|gb|EFL50092.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans
JJ]
Length = 1324
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/143 (30%), Positives = 81/143 (56%), Gaps = 9/143 (6%)
Query: 8 ASSSKKARISENPVSKNR----PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
A+ + A +++ P P L+V+D+ + R S +L++ G V VAENG+ A+
Sbjct: 1050 AARVEPASVADTPAGPRSDDLPPLSILLVEDNRVNRVFASDLLENRGHTVAVAENGRAAL 1109
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRA----MKVESKIVGVTSRNSETEREVFMQ 119
D + + +V +D++MPVMDG+ AT+A+RA + + ++G+++ + ERE F+
Sbjct: 1110 D-YLAAHQVDVVLMDIQMPVMDGLAATRAIRAGHPPIDPDLPVIGLSAYAMDQERERFLA 1168
Query: 120 AGLDLCYTKPLTMAKIVPLLEEL 142
AGLD KP+ + ++ ++
Sbjct: 1169 AGLDDYIIKPIDVGAFFAVVRDV 1191
>gi|357633257|ref|ZP_09131135.1| GAF sensor hybrid histidine kinase [Desulfovibrio sp. FW1012B]
gi|357581811|gb|EHJ47144.1| GAF sensor hybrid histidine kinase [Desulfovibrio sp. FW1012B]
Length = 575
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 38/111 (34%), Positives = 71/111 (63%), Gaps = 6/111 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L V+DD + +L++ GF +++A +G+EA++L R F ++ +D+++PV+DG+EA
Sbjct: 454 LFVEDDAVNALSGKSLLRTAGFSLDLAMDGREALELLRQ-KHFDLILMDIQLPVLDGVEA 512
Query: 90 TKAMRAMK-VESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
T+ +R+ K ES+ I+ +T+ +RE F++AG D +KP TM ++
Sbjct: 513 TRVIRSAKEFESQSRVPIIAMTAYAMAGDREKFLKAGFDAYLSKPFTMEEL 563
>gi|255948010|ref|XP_002564772.1| Pc22g07510 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591789|emb|CAP98039.1| Pc22g07510 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 649
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + RRI S L ++GF + VA NG+EAV+ R F + +D +MPVMDG A
Sbjct: 521 LLVEDNVINRRIISRKLSTLGFNMSVASNGQEAVEANRDNP-FDCILMDQQMPVMDGNRA 579
Query: 90 TKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
KA+R ++ E+ I+GVT+ + ++E + AG+D KP ++V + L
Sbjct: 580 AKAIRDIEKETGGHVPILGVTANVRDAQQEEMIDAGMDDIIYKPYGTHELVEKINHL 636
>gi|389749791|gb|EIM90962.1| hypothetical protein STEHIDRAFT_144448 [Stereum hirsutum FP-91666
SS1]
Length = 1518
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 79/142 (55%), Gaps = 9/142 (6%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
GAS K + S PVS R L+V+D+ ++R + + L S G++ A +G+E V +F
Sbjct: 1377 GASLLKSSVGSLEPVSGVR---VLIVEDNSILRNLLARWLSSKGYEFRDAIDGREGVRVF 1433
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVE------SKIVGVTSRNSETEREVFMQA 120
+ +F +V +D+ MPV+DGI AT +RA++ ++I+ +T +S ++ +A
Sbjct: 1434 ESDGQFDVVLLDLSMPVLDGIGATSEIRAIEASRPNHRPARILALTGMSSLDDKRRAFEA 1493
Query: 121 GLDLCYTKPLTMAKIVPLLEEL 142
G+D KP+ + + ++L
Sbjct: 1494 GVDGYLVKPVAFKTLSEMFQQL 1515
>gi|343506606|ref|ZP_08744082.1| hypothetical protein VII00023_07089 [Vibrio ichthyoenteri ATCC
700023]
gi|342802250|gb|EGU37688.1| hypothetical protein VII00023_07089 [Vibrio ichthyoenteri ATCC
700023]
Length = 555
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 68/112 (60%), Gaps = 1/112 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD M + I + +LK + ++AENG EA++ + G ++ +VF+D MP MDG EA
Sbjct: 443 LVVDDIRMNQIIINQMLKKFSIEPDLAENGLEAIEAVKHG-QYDLVFMDCRMPEMDGFEA 501
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
T +R + I+ +T+ + ER+ +++G+D TKP T A + ++E+
Sbjct: 502 TSYLRTHQYTRPIIALTAGTTLEERQKCIESGMDDILTKPYTAADLKLMIEK 553
>gi|416259893|ref|ZP_11640134.1| Two-component sensor protein RcsC [Shigella dysenteriae CDC
74-1112]
gi|320177232|gb|EFW52240.1| Two-component sensor protein RcsC [Shigella dysenteriae CDC
74-1112]
Length = 787
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 653 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 711
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 712 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 767
>gi|443477473|ref|ZP_21067318.1| integral membrane sensor hybrid histidine kinase [Pseudanabaena
biceps PCC 7429]
gi|443017406|gb|ELS31856.1| integral membrane sensor hybrid histidine kinase [Pseudanabaena
biceps PCC 7429]
Length = 758
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 76/136 (55%), Gaps = 7/136 (5%)
Query: 7 GASSSKKARISENPVSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
G + K+ I+ P N+P Y LVVDD P+ R++ +L +GF+V+ A NG+EA+ +
Sbjct: 537 GETLEKRQVIALAP---NQPDYKILVVDDKPINRQLLVKLLAPLGFEVKEASNGQEAIVM 593
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKV--ESKIVGVTSRNSETEREVFMQAGLD 123
+ H++++DM MPVMDG EATK +++ + I+ +T+ E E+ + + AG D
Sbjct: 594 WEAWQP-HLIWMDMRMPVMDGYEATKYIKSTTQGNATAIIALTASVLEQEKAIILSAGCD 652
Query: 124 LCYTKPLTMAKIVPLL 139
KP I L
Sbjct: 653 DFMRKPFKEQTIFAAL 668
>gi|425766255|gb|EKV04879.1| hypothetical protein PDIG_86800 [Penicillium digitatum PHI26]
gi|425778985|gb|EKV17080.1| hypothetical protein PDIP_32790 [Penicillium digitatum Pd1]
Length = 646
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + RRI S L ++GF + A NGKEAVD + G F + +D +MPVMDG A
Sbjct: 524 LLVEDNVINRRIISRKLNTLGFDISEARNGKEAVDANKKGP-FDCILMDQQMPVMDGNCA 582
Query: 90 TKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
TKA+R ++ E+ I+G+T+ + +++ + AG+D KP ++V
Sbjct: 583 TKAIREIEKETGGHVPILGLTANVRDEQQQEMIGAGMDDIIHKPYGTHELV 633
>gi|422780867|ref|ZP_16833652.1| RcsC Alpha-Beta-Loop [Escherichia coli TW10509]
gi|323977585|gb|EGB72671.1| RcsC Alpha-Beta-Loop [Escherichia coli TW10509]
Length = 708
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/131 (29%), Positives = 73/131 (55%), Gaps = 1/131 (0%)
Query: 2 MIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+I E + ++ VS N LVVDD P+ RR+ + L S+G++ + A +G +
Sbjct: 559 LIEMESDDPANTLPTTDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVD 618
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G
Sbjct: 619 ALNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESG 677
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 678 MDSCLSKPVTL 688
>gi|254504682|ref|ZP_05116833.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Labrenzia alexandrii DFL-11]
gi|222440753|gb|EEE47432.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Labrenzia alexandrii DFL-11]
Length = 580
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 77/114 (67%), Gaps = 4/114 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D + + + L+ +G++ ++A+NG+EA+D ++ A + ++F+DM+MPVMDG+EA
Sbjct: 463 LVVEDIVTNQLVITGFLQKLGYEADIADNGQEAIDRVQS-ADYDMIFMDMQMPVMDGLEA 521
Query: 90 TKAMRAMKVESKIV---GVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
T+ +R + + +V +T+ + + ++ +Q+G++ TKP+++ K+ +L+
Sbjct: 522 TRRIRQLPGPAGLVPIFAMTANAMQQDMDLCLQSGMNGFLTKPISLDKLKTVLQ 575
>gi|127511393|ref|YP_001092590.1| PAS/PAC sensor hybrid histidine kinase [Shewanella loihica PV-4]
gi|126636688|gb|ABO22331.1| multi-sensor hybrid histidine kinase [Shewanella loihica PV-4]
Length = 1230
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/115 (33%), Positives = 73/115 (63%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + +++ + +LKS G++V+VAENG+ A+D+ ++ V +D++MPVMDG+ A
Sbjct: 1113 LLVEDNFINQQVATELLKSAGYEVDVAENGQVALDMV-DAKQYDAVLMDIQMPVMDGLTA 1171
Query: 90 TKAMRA--MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TK +R K E ++ +T+ +RE + AG++ TKP+ + ++ L +
Sbjct: 1172 TKELRKRYTKEELPVIAMTAHAMSGDREKSLAAGMNAHITKPIVLNELFDTLAQW 1226
Score = 51.6 bits (122), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 3/74 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGIE 88
LVVDD+P +I+S ++ F V+ A NG EA L++ + ++ +D MP MDG+E
Sbjct: 970 LVVDDNPTALQIYSTAMRDFHFDVDTASNGAEA--LYKLEHRPVDLLLLDWMMPEMDGVE 1027
Query: 89 ATKAMRAMKVESKI 102
KA+ AM + ++
Sbjct: 1028 VIKALDAMVADGRL 1041
>gi|323507769|emb|CBQ67640.1| related to SSK1-two-component signal transducer [Sporisorium
reilianum SRZ2]
Length = 1676
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/104 (37%), Positives = 68/104 (65%), Gaps = 4/104 (3%)
Query: 2 MIGAEGASSSKKAR-ISENPVSKN--RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAEN 58
M+G +S+++ R + PV + P L+V+D+P+ +RI SM + K +VA N
Sbjct: 1285 MMGMGFTASARRGRGPKKAPVREAVLPPIKVLIVEDNPINQRILSMFMGKKKIKYDVANN 1344
Query: 59 GKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKI 102
G+EAV+ ++TG +H++ +D+++PVMDGIEATK +R ++ + I
Sbjct: 1345 GREAVEKWKTGG-YHLILMDIQLPVMDGIEATKEIRKLERNANI 1387
>gi|56412832|ref|YP_149907.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197361765|ref|YP_002141401.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
gi|56127089|gb|AAV76595.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Paratyphi A str. ATCC 9150]
gi|197093241|emb|CAR58686.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Paratyphi A str. AKU_12601]
Length = 948
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ + N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTANSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|392539812|ref|ZP_10286949.1| sensor protein [Pseudoalteromonas marina mano4]
Length = 1118
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/132 (29%), Positives = 75/132 (56%), Gaps = 7/132 (5%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF--RTGAKFH 73
+++ P+ + L+V+D+ + + + S +LK G ++AENG++A+ + +
Sbjct: 982 LTKAPIKDSSEPVLLLVEDNKINQVVASALLKEAGVIFDIAENGEQAISKLNAKQNNPYK 1041
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTK 128
++ +D +MP+MDG +AT+A+R K I+ +T+ + +RE + AG+D TK
Sbjct: 1042 LILMDCQMPIMDGYQATQAIRQGGAGEKYNAVSIIALTANAMQGDREKCIAAGMDDYLTK 1101
Query: 129 PLTMAKIVPLLE 140
PL MA + P L+
Sbjct: 1102 PLDMAALKPKLQ 1113
>gi|59711903|ref|YP_204679.1| hybrid sensory histidine kinase [Vibrio fischeri ES114]
gi|59480004|gb|AAW85791.1| hybrid sensory histidine kinase [Vibrio fischeri ES114]
Length = 692
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 67/113 (59%), Gaps = 3/113 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR---TGAKFHIVFIDMEMPVMDG 86
L+ +D+ + + ++L+ G V + NG+EA+ +F+ G F +V +D+ MPV DG
Sbjct: 575 LLAEDNKANQAVLQILLEKQGHHVSIVSNGEEAISIFKHQTNGCFFDVVLMDVSMPVKDG 634
Query: 87 IEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
I AT +R + +E I+ +T+ ETE+E+ ++AG++ +KP+ + +L
Sbjct: 635 ISATTELRKLGIELPIIAITAHAMETEKEMCLEAGMNDFISKPIRAKDLSDIL 687
>gi|421609706|ref|ZP_16050894.1| serine/threonine protein kinase [Rhodopirellula baltica SH28]
gi|408499479|gb|EKK03950.1| serine/threonine protein kinase [Rhodopirellula baltica SH28]
Length = 1998
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 46/114 (40%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF-HIVFIDMEMPVMDGIE 88
LVVDD RR+ S++L+ G +V++ NG+EAVD R+ IV +DM+MPVMDG
Sbjct: 1696 LVVDDCETNRRLLSLLLQDAGAEVDIRCNGREAVDALRSDPSMVDIVLMDMQMPVMDGYT 1755
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREV-FMQAGLDLCYTKPLTMAKIVPLLEE 141
AT A+R ++ IV +T+ N+ T EV +AG TKPL + ++ + E
Sbjct: 1756 ATSALRVQGFQAPIVALTA-NAMTGDEVRCREAGCTDYQTKPLDLNALLQCVAE 1808
>gi|428312058|ref|YP_007123035.1| ATPase [Microcoleus sp. PCC 7113]
gi|428253670|gb|AFZ19629.1| putative ATPase [Microcoleus sp. PCC 7113]
Length = 2014
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 68/115 (59%), Gaps = 4/115 (3%)
Query: 24 NRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
N+P Y L+ DD R++ +L +GF++ A NGKEAV+++ H++++DM+MP
Sbjct: 1792 NQPRYRILIADDKWSNRQLLIKLLNPLGFELREASNGKEAVEIWDEWEP-HLIWMDMQMP 1850
Query: 83 VMDGIEATKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
VMDG EATK ++A + ++ +T+ + E ER V + AG D KP A I
Sbjct: 1851 VMDGYEATKQIKATIKGQATAVIALTATSLEEERAVVLSAGCDDFIRKPFREADI 1905
>gi|410620824|ref|ZP_11331682.1| hypothetical protein GPAL_0175 [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410159707|dbj|GAC27056.1| hypothetical protein GPAL_0175 [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 821
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 63/104 (60%), Gaps = 4/104 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD + R I +L+ G V +AENG+EA+D + F ++ +D EMP+MDG EA
Sbjct: 703 LVVDDSEINRIIAQHMLEDFGLTVAIAENGQEALDQLQK-QTFDLILMDCEMPIMDGYEA 761
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
++ +R+M+ + IV +T+ + R+ +AG+D +KP+
Sbjct: 762 SRKIRSMQSRDERTPIVALTADAFDENRKKCKEAGMDGFLSKPI 805
>gi|406999978|gb|EKE17438.1| hypothetical protein ACD_10C00459G0002 [uncultured bacterium]
Length = 182
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 68/110 (61%), Gaps = 3/110 (2%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
++R L+V+D+P+ R + M+L+ V+ AENG++A+ L ++ ++ +DM+MP
Sbjct: 58 QSRGARVLLVEDEPINREVTQMLLEEAELVVDTAENGRQAIQLAENN-RYALILMDMQMP 116
Query: 83 VMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+ G+EAT+A+R + + I+ +T+ ETER+ + AG+ TKP+
Sbjct: 117 ELGGVEATQAIRQLPDFATTPILALTASAFETERQRALAAGMSDFITKPV 166
>gi|423197540|ref|ZP_17184123.1| hypothetical protein HMPREF1171_02155 [Aeromonas hydrophila SSU]
gi|404631228|gb|EKB27864.1| hypothetical protein HMPREF1171_02155 [Aeromonas hydrophila SSU]
Length = 1084
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
S PV+ R LVVDD+ + + LK +G +V V NG EA+ ++ F +V
Sbjct: 950 SPRPVAPTR-LRVLVVDDNHANQVLLRQQLKHLGHEVSVRGNGAEALQASQS-QPFDLVI 1007
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
D +MP+MDG E T+ +RA I G T+ + ERE+ + AG+D C KP+ +A++
Sbjct: 1008 TDCQMPLMDGFELTRRLRARGHTLPIWGFTAHATARERELCLAAGMDDCLYKPIGLARLR 1067
Query: 137 PLLEELQKN 145
L L+++
Sbjct: 1068 TALASLEQS 1076
>gi|438067229|ref|ZP_20856981.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
gi|435312212|gb|ELO86182.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 50-5646]
Length = 825
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 692 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 750
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 751 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 806
>gi|332532904|ref|ZP_08408776.1| putative two-component hybrid sensor and regulator [Pseudoalteromonas
haloplanktis ANT/505]
gi|332037570|gb|EGI74022.1| putative two-component hybrid sensor and regulator [Pseudoalteromonas
haloplanktis ANT/505]
Length = 1587
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/140 (30%), Positives = 78/140 (55%), Gaps = 14/140 (10%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
SS KK ++ E P L+V+D+P+ R++ +++LK + V +AENG+ A+D+ +
Sbjct: 1453 SSLKKEKVQE-------PTQILLVEDNPINRQVATLMLKKLNCDVTIAENGQLAIDILES 1505
Query: 69 --GAKFHIVFIDMEMPVMDGIEATKAMRA-----MKVESKIVGVTSRNSETEREVFMQAG 121
F +V +D +MPVMDG T A+R +I+ +T+ ++++E + AG
Sbjct: 1506 HDSGFFKLVLMDCQMPVMDGFATTAAIRKGMAGIQHKNIRIIAITANAMDSDKERCITAG 1565
Query: 122 LDLCYTKPLTMAKIVPLLEE 141
+D +KP+ + + LE+
Sbjct: 1566 MDDYLSKPIQLDILKDKLEQ 1585
Score = 56.6 bits (135), Expect = 3e-06, Method: Composition-based stats.
Identities = 40/123 (32%), Positives = 63/123 (51%), Gaps = 7/123 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-----FHIVFIDMEMPVM 84
LVVDD+ R + S L+ G KV +A + +EA+D+ K + I +DM+MP M
Sbjct: 1316 LVVDDNETNRIVISQQLEHWGAKVALACDAREALDMCAQQYKSNNCMYDIAVLDMQMPGM 1375
Query: 85 DGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
DGIE KA++A + +V +TS + + AG + KP+T A ++ L +
Sbjct: 1376 DGIELCKALKAHEHYKSMPLVMMTSIAGMEGAQRYSNAGFQAYFPKPVTTADLISALSVI 1435
Query: 143 QKN 145
N
Sbjct: 1436 TSN 1438
>gi|355683008|ref|ZP_09062782.1| hypothetical protein HMPREF9469_05819 [Clostridium citroniae
WAL-17108]
gi|354810733|gb|EHE95372.1| hypothetical protein HMPREF9469_05819 [Clostridium citroniae
WAL-17108]
Length = 924
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 75/128 (58%), Gaps = 7/128 (5%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTG-AK 71
SE P+ ++ L+V+D+ + R I + IL G V+ A +G EAV++ +TG
Sbjct: 794 SEAPLYNDKR--VLLVEDNEVNREIAATILSHAGLTVDTASDGLEAVEIMESMEKTGPGT 851
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
+ ++F+D+ MP MDG EA++ +R++ V + I +T+ +R+ M+AG+D KPL
Sbjct: 852 YDLIFMDIMMPRMDGYEASRRIRSLGVSTPITAMTANAFAEDRKKAMEAGIDEYLAKPLE 911
Query: 132 MAKIVPLL 139
M ++ +L
Sbjct: 912 MEELYRVL 919
>gi|254443535|ref|ZP_05057011.1| PAS fold family [Verrucomicrobiae bacterium DG1235]
gi|198257843|gb|EDY82151.1| PAS fold family [Verrucomicrobiae bacterium DG1235]
Length = 1302
Score = 71.6 bits (174), Expect = 9e-11, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 69/124 (55%), Gaps = 3/124 (2%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
K P L+ +D P+ +R+ + LK +G ++AENG E +D R+ ++ ++ +D +MP
Sbjct: 1176 KGPPLKILIAEDLPINQRVTRLQLKKIGLTADLAENGVEVLDAVRS-KRYDVILMDCQMP 1234
Query: 83 VMDGIEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
VMDG +ATK +RA+ S IV +T+ E ++E AG++ +KP ++ E
Sbjct: 1235 VMDGYQATKKLRAVPEHSDIHIVALTANAMEGDKERCFAAGMNDFVSKPTRPDTLLTAFE 1294
Query: 141 ELQK 144
K
Sbjct: 1295 NFAK 1298
>gi|257458984|ref|ZP_05624103.1| sensor histidine kinase/response regulator [Campylobacter gracilis
RM3268]
gi|257443369|gb|EEV18493.1| sensor histidine kinase/response regulator [Campylobacter gracilis
RM3268]
Length = 1517
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 66/114 (57%), Gaps = 7/114 (6%)
Query: 24 NRPYFA--LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
NR Y A L+ +D+ + +++ L S + + ENG A++ + + ++F+D+ M
Sbjct: 1219 NRKYNAKILIAEDNEINQKLMKHTLNSFNMNLTIVENGLLALEARKANNDYDLIFMDISM 1278
Query: 82 PVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
PVMDGIE+TK ++ + E+ IV VT+ + +RE FM AGLD TKP+
Sbjct: 1279 PVMDGIESTKQIKQYEHENNLRHIPIVAVTANALKGDREKFMAAGLDEYCTKPI 1332
>gi|157148541|ref|YP_001455860.1| hypothetical protein CKO_04368 [Citrobacter koseri ATCC BAA-895]
gi|157085746|gb|ABV15424.1| hypothetical protein CKO_04368 [Citrobacter koseri ATCC BAA-895]
Length = 1060
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 1/110 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD P R + L + G + AENG+EA+ + + ++ D+ MP MDGIE
Sbjct: 833 LIVDDHPSSRLLLKRQLATSGIVADEAENGEEALRHLQQ-QHYDLLITDLNMPAMDGIEL 891
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+ +R + I G+T+ E ERE + AG++ C KP+T+++I L
Sbjct: 892 TRQVRKFNRDLTIWGLTASAQEHERERCLAAGMNACIFKPITLSQISHFL 941
>gi|453087568|gb|EMF15609.1| hypothetical protein SEPMUDRAFT_123858 [Mycosphaerella populorum
SO2202]
Length = 874
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 74/122 (60%), Gaps = 9/122 (7%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR---TGAK-FHIVFIDMEMPVMD 85
L+V+D+ + ++I L++ GF V A NGKEAV+ R TGAK FH++ +D EMP+M
Sbjct: 742 LLVEDNIINQKIVHRKLEAKGFAVTTANNGKEAVEAIRKSSTGAKAFHVILMDQEMPLMS 801
Query: 86 GIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
G AT+A+R ++ +S I+GVT+ + + +++G+ TKP + + +++
Sbjct: 802 GNTATRAIRDLEKQSVIQYVPILGVTANVRGAQTDEMIESGMQDVITKPYKIEDLAEIIK 861
Query: 141 EL 142
EL
Sbjct: 862 EL 863
>gi|332532401|ref|ZP_08408279.1| sensor histidine kinase/response regulator [Pseudoalteromonas
haloplanktis ANT/505]
gi|332038044|gb|EGI74491.1| sensor histidine kinase/response regulator [Pseudoalteromonas
haloplanktis ANT/505]
Length = 936
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D+ + + L+ G +V +A +G+EA+ + K I+F+D++MP++DGI A
Sbjct: 801 LVAEDNTNNQIVIREFLEQKGCRVHIASDGQEAITKAKND-KIDIIFMDIQMPILDGISA 859
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
TKA+R + +E+ I+ +T+ ++E F++AG+D KP+ + LL+
Sbjct: 860 TKAIRELGIETPIIALTANAIHGDKERFIEAGMDDYLAKPIVSETLYLLLD 910
>gi|427712466|ref|YP_007061090.1| chemotaxis protein histidine kinase-like protein [Synechococcus sp.
PCC 6312]
gi|427376595|gb|AFY60547.1| chemotaxis protein histidine kinase-like protein [Synechococcus sp.
PCC 6312]
Length = 1026
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/129 (32%), Positives = 70/129 (54%), Gaps = 3/129 (2%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+S P ++R L+VDD +RR + L+ G++VE A++G+EA+DL G V
Sbjct: 890 VSSQP-RQSRQTTVLIVDDSINVRRFLANTLEKAGYRVEQAKDGQEALDLLSNGLSAQAV 948
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
D+EMP +DG + +K + +V +TSR+SE R++ + G +TKP A
Sbjct: 949 ICDIEMPRLDGYGFLSQAKNLKNQENLPVVMLTSRSSEKHRQLAINLGATAYFTKPFREA 1008
Query: 134 KIVPLLEEL 142
++ L+ L
Sbjct: 1009 DLLATLKTL 1017
>gi|398880719|ref|ZP_10635742.1| signal transduction histidine kinase [Pseudomonas sp. GM67]
gi|398191489|gb|EJM78678.1| signal transduction histidine kinase [Pseudomonas sp. GM67]
Length = 1099
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 6/126 (4%)
Query: 15 RISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI 74
+ +E P+ P LVVDD P R + L+ +G + VAE+G+ ++ + G F +
Sbjct: 841 KAAEVPIHTTTPLNVLVVDDHPANRLLMCQQLEFLGHRFSVAEDGEAGLEAWNNGL-FDL 899
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKP 129
V +D MP+M+G E T+A+R + SK ++G T+ E QAG+D C KP
Sbjct: 900 VIVDCNMPIMNGYELTRAIRRHEQHSKRPPCTVLGFTANAQPEELLRCKQAGMDDCLFKP 959
Query: 130 LTMAKI 135
LT+ +
Sbjct: 960 LTLTAL 965
>gi|357119147|ref|XP_003561307.1| PREDICTED: LOW QUALITY PROTEIN: autoinducer 2 sensor
kinase/phosphatase luxQ-like [Brachypodium distachyon]
Length = 126
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 66/114 (57%), Gaps = 3/114 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV++D + +I ++L+ ENGKEAVDL G KF I+ D MP+M G EA
Sbjct: 13 LVIEDCEIQSKILLIMLQMFNCHTTRVENGKEAVDLCLEGKKFDIILCDKWMPIMKGPEA 72
Query: 90 TKAMRAMKV-ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
+R+M+ E KIVGV++ + TE F+ AG D+ KP+ + + +++E+
Sbjct: 73 VAKIRSMRASEVKIVGVSADSDATEE--FLSAGADMFVAKPMKLEVLEAIIQEV 124
>gi|303246216|ref|ZP_07332496.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans
JJ]
gi|302492279|gb|EFL52151.1| multi-sensor hybrid histidine kinase [Desulfovibrio fructosovorans
JJ]
Length = 928
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/130 (34%), Positives = 69/130 (53%), Gaps = 6/130 (4%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-RTGAKFHIV 75
+ NP L+V+D R I LK+ G ++ A NGK AVD + R G +F IV
Sbjct: 670 ARNPTGNLDGMRLLLVEDIAANRMIIQHYLKTTGIDIDEAVNGKVAVDTYARAGGQFDIV 729
Query: 76 FIDMEMPVMDGIEATKAMRAMK-----VESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+D EMPVMDG+ AT+ +RA + + I+ +T+ +E +QAG D +KP+
Sbjct: 730 LMDREMPVMDGLAATREIRAFERGRGLPRTPIIALTAHAFVQHKEESLQAGCDAFLSKPV 789
Query: 131 TMAKIVPLLE 140
+ +V +E
Sbjct: 790 RKSDLVQAIE 799
Score = 37.7 bits (86), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/119 (26%), Positives = 56/119 (47%), Gaps = 6/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR----TGAKFHIVFIDMEMPVMD 85
LVVD + R + L G V AE+G A+ +G + ++F+DM MP MD
Sbjct: 539 LVVDHNETNRLLLHDHLNRWGATVAWAEDGPAALAAAYEAEGSGTPYDVIFLDMLMPGMD 598
Query: 86 GIEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
G+E + +R + ++ I+ TS ++ R + LD KP+ + + L ++
Sbjct: 599 GMEVAEKLRRLHPQAPPHIILNTSSDTFENRLKSKKLHLDGLLPKPIRRSDLRSLFSKI 657
>gi|409911822|ref|YP_006890287.1| sensor histidine kinase response regulator, PAS and PAS
domain-containing [Geobacter sulfurreducens KN400]
gi|298505397|gb|ADI84120.1| sensor histidine kinase response regulator, PAS and PAS
domain-containing [Geobacter sulfurreducens KN400]
Length = 772
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP L+VDD + R++ S++L+S G +V A +G EA+ A F +V +D++MPVM
Sbjct: 544 RPLSVLLVDDSAVSRKVVSLLLESDGHRVTFAGDGVEALAAIGREA-FDLVLMDVQMPVM 602
Query: 85 DGIEATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
DG EA +A+RA + I+ +T+R +RE+ ++AG D KP+ +++
Sbjct: 603 DGFEAMRAIRAGEAAGGARLPIIALTARALAGDRELCLEAGADDYLAKPVNFSEL 657
>gi|256831176|ref|YP_003159904.1| PAS/PAC sensor hybrid histidine kinase [Desulfomicrobium baculatum
DSM 4028]
gi|256580352|gb|ACU91488.1| PAS/PAC sensor hybrid histidine kinase [Desulfomicrobium baculatum
DSM 4028]
Length = 878
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/111 (32%), Positives = 67/111 (60%), Gaps = 1/111 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFK-VEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
L +D+P R + +L ++ +++ ENG++AVD G F IV +D++MP+MDG+E
Sbjct: 763 LAAEDNPFNRGLLVKMLNTLNVSDIQMVENGQDAVDALAAGQAFDIVLMDIQMPLMDGLE 822
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
AT+ +RAM + I+ +T+ E+++ ++AG++ KP + +V L
Sbjct: 823 ATRQIRAMGLNVPIIALTAHALESDQRKSLEAGMNGHLAKPYRLQDLVETL 873
>gi|307152388|ref|YP_003887772.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
gi|306982616|gb|ADN14497.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7822]
Length = 1308
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y L+V+D RR+ +L SVGF+V A NG +A+ L + + H++++DM MPVM+G
Sbjct: 1099 YRILIVEDVWESRRLLVELLSSVGFEVAEASNGAQALTLCESWSP-HLIWMDMRMPVMNG 1157
Query: 87 IEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
EATK ++ K I+ +T+ E +RE + AG D +KP T A I L +
Sbjct: 1158 YEATKLIKQHPFGQKTVIIALTASVFEDQRETIIAAGCDDIVSKPFTEAVIFKKLSQF 1215
>gi|392568614|gb|EIW61788.1| hypothetical protein TRAVEDRAFT_118135 [Trametes versicolor
FP-101664 SS1]
Length = 1162
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/96 (41%), Positives = 61/96 (63%), Gaps = 3/96 (3%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K R SEN + P L+VDD+P+ + I S +K K +VA+NG+EAV +R+G
Sbjct: 850 KGTRGSENNIVP--PISVLIVDDNPINQTILSTFMKKKKIKYDVAKNGEEAVQKWRSGG- 906
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTS 107
FH++ +D++MPVMDGI+ATK +R + + + G S
Sbjct: 907 FHLILMDIQMPVMDGIQATKEIRRFEKNNGVGGFPS 942
>gi|302889804|ref|XP_003043787.1| hypothetical protein NECHADRAFT_48041 [Nectria haematococca mpVI
77-13-4]
gi|256724705|gb|EEU38074.1| hypothetical protein NECHADRAFT_48041 [Nectria haematococca mpVI
77-13-4]
Length = 1228
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/137 (30%), Positives = 73/137 (53%), Gaps = 7/137 (5%)
Query: 10 SSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
S+ K E P P F L+V+D+ + RI +K +G + A +G++AVD +R G
Sbjct: 1088 STPKPPAQEKPQDTREPRF-LLVEDNAINMRILQAFMKKLGHVYDAATDGRQAVDSYRDG 1146
Query: 70 A-KFHIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLD 123
++ + +D+ MPVMDG EAT+ +R + E I ++ S+ +E GLD
Sbjct: 1147 GGRYRCILMDISMPVMDGFEATRLIRGFEKEKHLPRCHIFAISGLASKEAQEDAFATGLD 1206
Query: 124 LCYTKPLTMAKIVPLLE 140
L +KP+ + ++ +L+
Sbjct: 1207 LFLSKPVQLKELSRILK 1223
>gi|172035632|ref|YP_001802133.1| two-component hybrid sensor and regulator [Cyanothece sp. ATCC
51142]
gi|354554875|ref|ZP_08974178.1| CheA signal transduction histidine kinase [Cyanothece sp. ATCC
51472]
gi|171697086|gb|ACB50067.1| two-component hybrid sensor and regulator [Cyanothece sp. ATCC
51142]
gi|353553029|gb|EHC22422.1| CheA signal transduction histidine kinase [Cyanothece sp. ATCC
51472]
Length = 951
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/132 (34%), Positives = 73/132 (55%), Gaps = 2/132 (1%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
I +N V + L+VDD +RR ++L G++VE A++G+EAVD G + + V
Sbjct: 820 IEDNSVVVEQTSTILIVDDSINVRRYLMIMLNKAGYQVEEAKDGQEAVDKLFNGLQVNAV 879
Query: 76 FIDMEMPVMDGIEATKAMRA-MKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
D+EMP +DG + ++ + E I+ +TSR+ E R++ M G ++KP T
Sbjct: 880 ISDLEMPRLDGYGVLEMVKQDTRFEQLPIIILTSRSQEKHRKLAMNLGASAYFSKPYTEQ 939
Query: 134 KIVPLLEELQKN 145
K++ LEEL N
Sbjct: 940 KLLDTLEELLMN 951
>gi|126432768|ref|YP_001068459.1| two component transcriptional regulator [Mycobacterium sp. JLS]
gi|126232568|gb|ABN95968.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. JLS]
Length = 243
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Query: 20 PVSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFID 78
P +++ P L+VDDDP +R + L+ GF V VA NGKEA+ L + + +D
Sbjct: 10 PAAQDTPGRTVLMVDDDPDVRTSVARGLRHSGFDVRVAANGKEALRLL-SAESHDALVLD 68
Query: 79 MEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
++MP +DG+ A+RA+ + I +++R++ +R ++AG D TKP + ++V
Sbjct: 69 VQMPELDGVAVVTALRALGNDIPICVLSARDTVNDRIAGLEAGADDYLTKPFDLGELVAR 128
Query: 139 LEELQK 144
L L +
Sbjct: 129 LHALLR 134
>gi|357635433|ref|ZP_09133311.1| multi-sensor hybrid histidine kinase [Desulfovibrio sp. FW1012B]
gi|357583987|gb|EHJ49320.1| multi-sensor hybrid histidine kinase [Desulfovibrio sp. FW1012B]
Length = 1340
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + R +L+S G +V +AENG+ A+D F + +V +D++MPVMDG+ A
Sbjct: 1091 LLVEDNRVNRVFAGDLLESRGHEVAMAENGRAALD-FLARERVDVVLMDIQMPVMDGLAA 1149
Query: 90 TKAMRA----MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+A+RA + +VG+++ + ERE F+ AGLD TKP+
Sbjct: 1150 TRAIRAGEGGIDPTLPVVGLSAYAMDQERERFLAAGLDGYITKPI 1194
>gi|254423212|ref|ZP_05036930.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Synechococcus sp. PCC 7335]
gi|196190701|gb|EDX85665.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Synechococcus sp. PCC 7335]
Length = 852
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/121 (34%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
R Y LVV+D R + +L +GF+V+ NG+EA+ F++ ++++DM MP+M
Sbjct: 619 RTYRILVVEDVDSARSLMLALLSPIGFEVQAVTNGEEAIAAFKSWCP-DLIWMDMRMPIM 677
Query: 85 DGIEATKAMRAM----KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
DG EATK +RA+ + +KI+ VT+ E ER + G D KP I +
Sbjct: 678 DGYEATKQIRAIAANQDISTKIIAVTASAFEEERAQALACGCDDLVRKPFDTQTIFEKMT 737
Query: 141 E 141
E
Sbjct: 738 E 738
>gi|218441503|ref|YP_002379832.1| CheA signal transduction histidine kinase [Cyanothece sp. PCC 7424]
gi|218174231|gb|ACK72964.1| CheA signal transduction histidine kinase [Cyanothece sp. PCC 7424]
Length = 974
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 2/115 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD +RR + L G++VE+A++G+EAVD +G V D+EMP +DG
Sbjct: 856 LVVDDSVNVRRYLAFTLDKAGYQVELAKDGQEAVDKLMSGISVEAVICDLEMPRLDGYGV 915
Query: 90 TKAMRA-MKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
+ +R + E+ I+ +TSR+++ R++ M G + ++KP T +++ LE+L
Sbjct: 916 LEILRQHSQFETLPIIMLTSRSNDKHRKLAMNLGANAYFSKPYTEQELLKTLEQL 970
>gi|437189643|ref|ZP_20710648.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
gi|435233016|gb|ELO14074.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 13183-1]
Length = 863
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 730 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 788
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 789 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 844
>gi|238505703|ref|XP_002384063.1| sensor histidine kinase/response regulator, putative [Aspergillus
flavus NRRL3357]
gi|220690177|gb|EED46527.1| sensor histidine kinase/response regulator, putative [Aspergillus
flavus NRRL3357]
Length = 1238
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFK-VEVAENGKEAVDLF-RTGAK 71
+ I E R LVVDD+ + + +K ++ AENGK AVD R
Sbjct: 1090 SEIKEPESKPQRLARVLVVDDNAINLNLMLTFMKKRNLSTLDSAENGKVAVDAVERLQQG 1149
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVE------SKIVGVTSRNSETEREVFMQAGLDLC 125
+ ++F+D+ MPVM+G EAT+A+RA++ E + I+ +T +S + + +G+DL
Sbjct: 1150 YDLIFMDISMPVMNGFEATRAIRAIEKERDCCTPATIIALTGLSSSRDESEALTSGVDLF 1209
Query: 126 YTKPLTMAKIVPLLEELQKN 145
TKP++ ++ LLEE +N
Sbjct: 1210 LTKPVSFKEVSRLLEEWAEN 1229
>gi|121713400|ref|XP_001274311.1| two component histidine kinase 1, putative [Aspergillus clavatus
NRRL 1]
gi|119402464|gb|EAW12885.1| two component histidine kinase 1, putative [Aspergillus clavatus
NRRL 1]
Length = 675
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 75/129 (58%), Gaps = 8/129 (6%)
Query: 19 NPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFID 78
+P +NR L+V+D+ + +RI S L+S+GF+V A NG+EA++ +F + +D
Sbjct: 546 SPADENR--HILLVEDNVINQRIVSRKLQSLGFQVVEANNGREALEAV-YARRFDCILMD 602
Query: 79 MEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
MPVMDG AT+A+R + E ++GVT+ +++ +Q+G+D KP M
Sbjct: 603 QSMPVMDGNAATRAIREFEKEKTVDHIPVLGVTANVRAEQQQEMLQSGMDDVIHKPYKME 662
Query: 134 KIVPLLEEL 142
++ ++EL
Sbjct: 663 ELTKKIQEL 671
>gi|409195797|ref|ZP_11224460.1| sensory box histidine kinase/response regulator [Marinilabilia
salmonicolor JCM 21150]
Length = 127
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 68/107 (63%), Gaps = 5/107 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + +++ + L GFK++VA NGKEA+D + + I+ +D+ MPVMDG+EA
Sbjct: 7 LLVEDNVLNQKLIFLTLSKYGFKIDVANNGKEALDKLQI-KNYDIILMDLMMPVMDGLEA 65
Query: 90 TKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R + ++ I+G+T+ + +RE ++ G+D +KP +
Sbjct: 66 TRNIRKREQDTGNRNIIIGLTANTYDADREKCIKEGMDEYMSKPFDI 112
>gi|85675315|dbj|BAA16001.2| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Escherichia coli str. K12 substr. W3110]
Length = 124
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 66/105 (62%), Gaps = 5/105 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI--VFIDMEMPVMDGI 87
LVVDD P+ RR+ + L S+G++ + A +G +A+++ +K HI V D+ MP MDG
Sbjct: 3 LVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL---SKNHIDIVLSDVNMPNMDGY 59
Query: 88 EATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 60 RLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 104
>gi|428312873|ref|YP_007123850.1| signal transduction histidine kinase [Microcoleus sp. PCC 7113]
gi|428254485|gb|AFZ20444.1| signal transduction histidine kinase [Microcoleus sp. PCC 7113]
Length = 653
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 48/130 (36%), Positives = 78/130 (60%), Gaps = 5/130 (3%)
Query: 5 AEGAS-SSKKARISENPVSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
AE AS + ++R ++ N+P Y L VDD R++ +L +GF+V AENG+EA
Sbjct: 421 AEAASIQTGESRQRAIALAPNQPTYRLLAVDDRWESRKLLVHLLSPLGFQVREAENGQEA 480
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRA-MKVE-SKIVGVTSRNSETEREVFMQA 120
V L+ + H++ +DM+MPVMDG EAT+ ++A +K + + I+ +T+ E +R + + A
Sbjct: 481 VALWESWQP-HLILMDMQMPVMDGYEATQQIKAHLKGQATTIIALTASAFEADRTMILSA 539
Query: 121 GLDLCYTKPL 130
G D KP
Sbjct: 540 GCDDFLRKPF 549
>gi|359449540|ref|ZP_09239030.1| hypothetical protein P20480_1747 [Pseudoalteromonas sp. BSi20480]
gi|358044620|dbj|GAA75279.1| hypothetical protein P20480_1747 [Pseudoalteromonas sp. BSi20480]
Length = 310
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 75/134 (55%), Gaps = 7/134 (5%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF--RTGAKFH 73
+++ P+ + L+V+D+ + + + S +LK G ++AENG++A+ + +
Sbjct: 174 LTKAPIKDSSEPVLLLVEDNKINQVVASALLKEAGVIFDIAENGEQAISKLNAKQNNPYK 233
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTK 128
++ +D +MP+MDG +AT+A+R K I+ +T+ + +RE + AG+D TK
Sbjct: 234 LILMDCQMPIMDGYQATQAIRQGGAGEKYNAVSIIALTANAMQGDREKCIAAGMDDYLTK 293
Query: 129 PLTMAKIVPLLEEL 142
PL MA + P L+
Sbjct: 294 PLDMAALKPKLQHW 307
>gi|417947712|ref|ZP_12590863.1| putative two-component sensor [Vibrio splendidus ATCC 33789]
gi|342810750|gb|EGU45821.1| putative two-component sensor [Vibrio splendidus ATCC 33789]
Length = 796
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 68/110 (61%), Gaps = 5/110 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D + +++ M+LK +GF+V++A+NGK VD F+ ++ ++F+D +MPV+DG EA
Sbjct: 665 LVVEDSRVNQQVAKMMLKKLGFEVDIADNGKVGVDKFKHN-EYQMIFMDCQMPVLDGFEA 723
Query: 90 TKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
TK +RA++ + IV +T+ ++ + G+D KP+ +
Sbjct: 724 TKQIRALEEGTSKHIPIVALTANVVLKDKHLCFDVGMDEFLPKPVNQGTL 773
>gi|108797145|ref|YP_637342.1| two component transcriptional regulator [Mycobacterium sp. MCS]
gi|119866230|ref|YP_936182.1| two component transcriptional regulator [Mycobacterium sp. KMS]
gi|108767564|gb|ABG06286.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. MCS]
gi|119692319|gb|ABL89392.1| two component transcriptional regulator, winged helix family
[Mycobacterium sp. KMS]
Length = 243
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/126 (32%), Positives = 71/126 (56%), Gaps = 2/126 (1%)
Query: 20 PVSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFID 78
P +++ P L+VDDDP +R + L+ GF V VA NGKEA+ L + + +D
Sbjct: 10 PAAQDTPGRTVLMVDDDPDVRTSVARGLRHSGFDVRVAANGKEALRLL-SAESHDALVLD 68
Query: 79 MEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPL 138
++MP +DG+ A+RA+ + I +++R++ +R ++AG D TKP + ++V
Sbjct: 69 VQMPELDGVAVVTALRALGNDIPICVLSARDTVNDRIAGLEAGADDYLTKPFDLGELVAR 128
Query: 139 LEELQK 144
L L +
Sbjct: 129 LHALLR 134
>gi|149202987|ref|ZP_01879958.1| sensor histidine kinase/response regulator [Roseovarius sp. TM1035]
gi|149143533|gb|EDM31569.1| sensor histidine kinase/response regulator [Roseovarius sp. TM1035]
Length = 720
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 5/121 (4%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
AR+ + +R L +D+ R + S ++K + ++ AENG+EAVDLF++ A
Sbjct: 570 ARVMPPSDASSRAMRVLAAEDNRTNRLVFSNMVKGLDIELTFAENGQEAVDLFQSLAP-D 628
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKP 129
++F+D+ MP MDG EAT+A+RA++ +S IV +T+ + + AGLD TKP
Sbjct: 629 VIFMDISMPEMDGKEATRAIRAIEAQSGRHVPIVAMTAHAMTGDDAEILAAGLDHYLTKP 688
Query: 130 L 130
L
Sbjct: 689 L 689
>gi|83773310|dbj|BAE63437.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 1194
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFK-VEVAENGKEAVDLF-RTGAK 71
+ I E R LVVDD+ + + +K ++ AENGK AVD R
Sbjct: 1046 SEIKEPESKPQRLARVLVVDDNAINLNLMLTFMKKRNLSTLDSAENGKVAVDAVERLQQG 1105
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVE------SKIVGVTSRNSETEREVFMQAGLDLC 125
+ ++F+D+ MPVM+G EAT+A+RA++ E + I+ +T +S + + +G+DL
Sbjct: 1106 YDLIFMDISMPVMNGFEATRAIRAIEKERDCCTPATIIALTGLSSSRDESEALTSGVDLF 1165
Query: 126 YTKPLTMAKIVPLLEELQKN 145
TKP++ ++ LLEE +N
Sbjct: 1166 LTKPVSFKEVSRLLEEWAEN 1185
>gi|391863117|gb|EIT72431.1| signal transduction histidine kinase [Aspergillus oryzae 3.042]
Length = 1184
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFK-VEVAENGKEAVDLF-RTGAK 71
+ I E R LVVDD+ + + +K ++ AENGK AVD R
Sbjct: 1036 SEIKEPESKPQRLARVLVVDDNAINLNLMLTFMKKRNLSTLDSAENGKVAVDAVERLQQG 1095
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVE------SKIVGVTSRNSETEREVFMQAGLDLC 125
+ ++F+D+ MPVM+G EAT+A+RA++ E + I+ +T +S + + +G+DL
Sbjct: 1096 YDLIFMDISMPVMNGFEATRAIRAIEKERDCCTPATIIALTGLSSSRDESEALTSGVDLF 1155
Query: 126 YTKPLTMAKIVPLLEELQKN 145
TKP++ ++ LLEE +N
Sbjct: 1156 LTKPVSFKEVSRLLEEWAEN 1175
>gi|419886982|ref|ZP_14407600.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Escherichia coli O111:H8 str.
CVM9570]
gi|388364226|gb|EIL28095.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Escherichia coli O111:H8 str.
CVM9570]
Length = 556
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 422 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 480
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 481 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 536
>gi|334131300|ref|ZP_08505065.1| Putative histidine kinase [Methyloversatilis universalis FAM5]
gi|333443649|gb|EGK71611.1| Putative histidine kinase [Methyloversatilis universalis FAM5]
Length = 1042
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/146 (31%), Positives = 82/146 (56%), Gaps = 4/146 (2%)
Query: 2 MIGAEGASSSKKAR-ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGK 60
+I A GA S++ A S S++RP L+ +D+P+ + + +L+ +G +V+V +NG
Sbjct: 750 LITATGAGSARCASGASALSPSEHRPLTLLLAEDNPVNQTLAVRLLERLGHRVDVVDNGL 809
Query: 61 EAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVE--SKIVGVTSRNSETEREVFM 118
AV ++ + +D++MP M G EAT+ +RA E + I+ +T+ +RE
Sbjct: 810 SAVSK-AAEQRYDAILMDLQMPQMGGFEATRHIRAQDGERHTPIIAMTAHAMAGDREKCF 868
Query: 119 QAGLDLCYTKPLTMAKIVPLLEELQK 144
AG+D +KP+ +A ++ LEE K
Sbjct: 869 AAGMDAYVSKPVQVAALIRALEEALK 894
>gi|317151308|ref|XP_001824570.2| two-component sensor protein histidine protein kinase (dhkk, dhkj)
[Aspergillus oryzae RIB40]
Length = 1236
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/140 (32%), Positives = 76/140 (54%), Gaps = 8/140 (5%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFK-VEVAENGKEAVDLF-RTGAK 71
+ I E R LVVDD+ + + +K ++ AENGK AVD R
Sbjct: 1088 SEIKEPESKPQRLARVLVVDDNAINLNLMLTFMKKRNLSTLDSAENGKVAVDAVERLQQG 1147
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVE------SKIVGVTSRNSETEREVFMQAGLDLC 125
+ ++F+D+ MPVM+G EAT+A+RA++ E + I+ +T +S + + +G+DL
Sbjct: 1148 YDLIFMDISMPVMNGFEATRAIRAIEKERDCCTPATIIALTGLSSSRDESEALTSGVDLF 1207
Query: 126 YTKPLTMAKIVPLLEELQKN 145
TKP++ ++ LLEE +N
Sbjct: 1208 LTKPVSFKEVSRLLEEWAEN 1227
>gi|51246144|ref|YP_066028.1| two-component system sensory/regulatory protein [Desulfotalea
psychrophila LSv54]
gi|50877181|emb|CAG37021.1| related to two-component system sensory/regulatory protein (hybrid
family) [Desulfotalea psychrophila LSv54]
Length = 1102
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 73/124 (58%), Gaps = 12/124 (9%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
R + L+ +D P + + L+ G +V NG +AV++++ G F ++ +D+ MP M
Sbjct: 764 RRFQILLAEDVPGNATLAQLRLEQQGHRVRHVWNGSQAVEMYK-GGTFDLILMDVMMPEM 822
Query: 85 DGIEATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPL-------TMA 133
DGIEAT+ +RA++ ESK I+ +T+ + +R+ +M+AG+D KP+ TM
Sbjct: 823 DGIEATRKIRALERESKGHITIIALTASIMKEDRQRYMRAGMDAVVGKPIILEGLFATME 882
Query: 134 KIVP 137
++VP
Sbjct: 883 RVVP 886
>gi|257094787|ref|YP_003168428.1| integral membrane sensor hybrid histidine kinase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
gi|257047311|gb|ACV36499.1| integral membrane sensor hybrid histidine kinase [Candidatus
Accumulibacter phosphatis clade IIA str. UW-1]
Length = 709
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/140 (29%), Positives = 75/140 (53%), Gaps = 5/140 (3%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
A+G ++ + PV LVV+D+ + +R+ +L+ +G + ++G++AVD
Sbjct: 471 ADGVATPAPGEVRAVPVRAGSQARVLVVEDNMINQRVVEALLRKLGLSAALVQDGQQAVD 530
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQ 119
G IV +D+ MPVMDG AT+ +R +V++ I+ +T+ +RE ++
Sbjct: 531 AITRGHAADIVLMDVNMPVMDGCTATERIRRWEVDNSLPRRPIIALTANAFAEDRERCLR 590
Query: 120 AGLDLCYTKPLTMAKIVPLL 139
AG+D KP+T A + +L
Sbjct: 591 AGMDDYLAKPVTFATLQAVL 610
>gi|237653493|ref|YP_002889807.1| multi-sensor hybrid histidine kinase [Thauera sp. MZ1T]
gi|237624740|gb|ACR01430.1| multi-sensor hybrid histidine kinase [Thauera sp. MZ1T]
Length = 1407
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/114 (32%), Positives = 72/114 (63%), Gaps = 3/114 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+P+ R + +L +VG VE AE+G EA++ + A + ++ +DM+MPVMDG++A
Sbjct: 1039 LLVEDNPINRLVALELLHAVGLTVETAEDGAEALERVK-AADYALILMDMQMPVMDGLDA 1097
Query: 90 TKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
T+A+RA+ + I+ +T+ + +R ++AG++ KP+ ++ L +
Sbjct: 1098 TRAIRALPGWRDKPILAMTANAFDDDRRTCVEAGMNDFIAKPVEPERLYATLHK 1151
>gi|213419730|ref|ZP_03352796.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhi str. E01-6750]
Length = 458
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 325 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 383
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 384 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 439
>gi|418940424|ref|ZP_13493789.1| multi-sensor hybrid histidine kinase [Rhizobium sp. PDO1-076]
gi|375052838|gb|EHS49240.1| multi-sensor hybrid histidine kinase [Rhizobium sp. PDO1-076]
Length = 753
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 68/109 (62%), Gaps = 4/109 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + + + + L +G VE+A +G EAV L R KF +V +DM+MPVMDGIEA
Sbjct: 496 LLVEDNRVNQIVATRFLARLGQDVEIANDGTEAVVLARQ-QKFDLVLMDMQMPVMDGIEA 554
Query: 90 TK---AMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
T+ A R E+ I+ +T+ S+ +R + AG+ +KP+T+ ++
Sbjct: 555 TRRIIAERGPSAETPIIAMTANASDDDRRRCLDAGMSGFESKPVTLERL 603
>gi|375265667|ref|YP_005023110.1| histidine kinase [Vibrio sp. EJY3]
gi|369840988|gb|AEX22132.1| histidine kinase [Vibrio sp. EJY3]
Length = 1054
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/118 (30%), Positives = 72/118 (61%), Gaps = 5/118 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + +++ S++L G++ E+AENG+ AV+ F+ + F ++ +D MPVMDG EA
Sbjct: 936 LLVEDNRVNQKVASLLLNKAGYQYEIAENGQIAVEKFQQDSNFSVILMDCMMPVMDGFEA 995
Query: 90 TKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ +RA + E + I+ +T+ + + + +G+D KP+ K++ +E +
Sbjct: 996 TRQIRAFEKENGLKKTPIIALTASVVDDDIQRCFDSGMDAYVPKPVRKEKLLHQIETM 1053
Score = 64.3 bits (155), Expect = 2e-08, Method: Composition-based stats.
Identities = 35/107 (32%), Positives = 62/107 (57%), Gaps = 7/107 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD+ + ++I + L GF ++AENG EAVD+FR ++ ++ +D MPVMDG EA
Sbjct: 772 LIVDDNTVNQKIAGLHLTKAGFNFDIAENGVEAVDMFRK-HQYSLILMDCMMPVMDGFEA 830
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +R ++ + I+ +T+ + + + + G+D KP
Sbjct: 831 TEHIRQIEASEQRPFRIPIIALTASVVDDDIQKCLAVGMDDYIPKPF 877
>gi|331642848|ref|ZP_08343983.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli H736]
gi|331039646|gb|EGI11866.1| sensor kinase protein RcsC (Capsular synthesis regulatorcomponent
C) [Escherichia coli H736]
Length = 775
Score = 71.6 bits (174), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 641 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 699
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 700 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 755
>gi|147528|gb|AAA24505.1| capsular sunthesis regulator component C [Escherichia coli]
Length = 933
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 799 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVL 857
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 858 SDVNMPNMDGYRLTQRTRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 913
>gi|166031682|ref|ZP_02234511.1| hypothetical protein DORFOR_01382 [Dorea formicigenerans ATCC
27755]
gi|166028659|gb|EDR47416.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein [Dorea
formicigenerans ATCC 27755]
Length = 946
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 86/146 (58%), Gaps = 12/146 (8%)
Query: 8 ASSSKKARISENPVSKNRPY-----FALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
A + K+ R +EN S+ + Y LVV+D+ + R I +L+ GF+VE AENG A
Sbjct: 801 AQTEKEER-TENTESEEKDYDFRGKRILVVEDNELNREIVKAVLEETGFEVEEAENGAVA 859
Query: 63 VDLFRT-GAKFH-IVFIDMEMPVMDGIEATKAMRAMK----VESKIVGVTSRNSETEREV 116
VD +T GA ++ +V +D++MPVMDG ATK +R ++ I+ +++ E +R+
Sbjct: 860 VDKIKTAGALYYDVVLMDIQMPVMDGYMATKKIRNLEDSDLANIPIIALSANAFEEDRKA 919
Query: 117 FMQAGLDLCYTKPLTMAKIVPLLEEL 142
AG++ KP+ +++++ +L +L
Sbjct: 920 SADAGMNGHLAKPVNVSELLKMLCKL 945
>gi|239908139|ref|YP_002954880.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
gi|239798005|dbj|BAH76994.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
Length = 807
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/114 (35%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 28 FALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGI 87
L+V+D+ + +++ L+S+G V+VA NG+EAV++ R+ + + +V +D++MPVMDG+
Sbjct: 314 LVLLVEDNAINQQVARETLESLGAAVDVAINGREAVEMVRS-SLYDVVLMDVQMPVMDGL 372
Query: 88 EATKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
AT+A+R + E IV +T+ +RE ++AG++ TKPL + +++ L
Sbjct: 373 AATRAIRQLPGTAELPIVALTAHALAEDRERCLEAGMNDYLTKPLEVDRLLASL 426
Score = 63.2 bits (152), Expect = 4e-08, Method: Composition-based stats.
Identities = 44/126 (34%), Positives = 67/126 (53%), Gaps = 13/126 (10%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV-DLFRT---GAKFHIVFIDMEMPVMD 85
L+VDD + R I S IL+S G +V AENGK+A LF G F ++ +D+EMP MD
Sbjct: 588 LLVDDAKLNRAIFSQILRSGGHEVVTAENGKDACRRLFGQKPDGRPFDLILMDIEMPEMD 647
Query: 86 GIEATKAMRAMKVES---------KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
G A + +R + S IV +TS + + E ++AG+D C K +++
Sbjct: 648 GPTAARTIRRLLAASVAPPCAPGVPIVALTSHDCKDEAARCLEAGMDACLHKVFEQGELL 707
Query: 137 PLLEEL 142
+L+ L
Sbjct: 708 AILQGL 713
>gi|213646233|ref|ZP_03376286.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhi str. J185]
Length = 961
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417756480|ref|ZP_12404555.1| his Kinase A domain protein [Escherichia coli DEC2B]
gi|419035363|ref|ZP_13582449.1| his Kinase A domain protein [Escherichia coli DEC2D]
gi|377873896|gb|EHU38527.1| his Kinase A domain protein [Escherichia coli DEC2B]
gi|377879719|gb|EHU44291.1| his Kinase A domain protein [Escherichia coli DEC2D]
Length = 647
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ IV
Sbjct: 513 TDKAVSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLNKN-HIDIVL 571
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 572 SDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 627
>gi|300868943|ref|ZP_07113548.1| putative Sensor protein [Oscillatoria sp. PCC 6506]
gi|300333066|emb|CBN58740.1| putative Sensor protein [Oscillatoria sp. PCC 6506]
Length = 1739
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/124 (34%), Positives = 76/124 (61%), Gaps = 6/124 (4%)
Query: 21 VSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
++ N+P Y LVV+D R + +++++GF+V AENG+EA++L+ + + H++++DM
Sbjct: 1518 LAPNQPNYRILVVEDRYENRLLLVALIRAIGFEVCEAENGREAIELW-SNWEPHLIWMDM 1576
Query: 80 EMPVMDGIEATKAMRAMK----VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
MPVMDG EATK ++ + ++ I+G+T+ E ER + AG D KP I
Sbjct: 1577 RMPVMDGYEATKYIKDKEHLRGQKTVIIGITASAFEEERSQVLSAGCDDFVRKPFRDEAI 1636
Query: 136 VPLL 139
+ ++
Sbjct: 1637 LEMM 1640
>gi|206580985|ref|YP_002237365.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Klebsiella pneumoniae 342]
gi|206570043|gb|ACI11819.1| sensor kinase protein RcsC [Klebsiella pneumoniae 342]
Length = 946
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 3 IGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
+ + A +S+ + + N LVVDD P+ RR+ + L S+G++ A +G +A
Sbjct: 799 VALDSAENSRALMAPDAQIGNNDDMMILVVDDHPINRRLLADQLGSLGYQCVTANDGVDA 858
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G+
Sbjct: 859 LNVL-SKQHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGM 917
Query: 123 DLCYTKPLTM 132
D C +KP+T+
Sbjct: 918 DSCLSKPVTL 927
>gi|418803225|ref|ZP_13358849.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
gi|392775835|gb|EJA32526.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35202]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|290508496|ref|ZP_06547867.1| two-component system, NarL family, capsular synthesis sensor
histidine kinase RcsC [Klebsiella sp. 1_1_55]
gi|289777890|gb|EFD85887.1| two-component system, NarL family, capsular synthesis sensor
histidine kinase RcsC [Klebsiella sp. 1_1_55]
Length = 946
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 72/130 (55%), Gaps = 1/130 (0%)
Query: 3 IGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
+ + A +S+ + + N LVVDD P+ RR+ + L S+G++ A +G +A
Sbjct: 799 VALDSAENSRALMAPDAQIGNNDDMMILVVDDHPINRRLLADQLGSLGYQCVTANDGVDA 858
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G+
Sbjct: 859 LNVL-SKQHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGM 917
Query: 123 DLCYTKPLTM 132
D C +KP+T+
Sbjct: 918 DSCLSKPVTL 927
>gi|168466036|ref|ZP_02699906.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|418763717|ref|ZP_13319823.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|418765721|ref|ZP_13321804.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|418770124|ref|ZP_13326149.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|418776368|ref|ZP_13332314.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|418781809|ref|ZP_13337685.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|418785815|ref|ZP_13341642.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
gi|419789097|ref|ZP_14314779.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|419791421|ref|ZP_14317074.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|195631257|gb|EDX49817.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|392615601|gb|EIW98037.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. Levine 1]
gi|392620641|gb|EIX03008.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. Levine 15]
gi|392731410|gb|EIZ88637.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35185]
gi|392738327|gb|EIZ95473.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21539]
gi|392740234|gb|EIZ97360.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35199]
gi|392746046|gb|EJA03065.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 35188]
gi|392746079|gb|EJA03097.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 33953]
gi|392751056|gb|EJA08013.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21559]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|312172971|emb|CBX81226.1| Two component sensor kinase/response regulator protein RcsC
[Erwinia amylovora ATCC BAA-2158]
Length = 987
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N LVVDD P+ R + S L S+G++V+ A++G +A+++ + IV D+ MP
Sbjct: 854 NDDILILVVDDHPINRMLLSDQLGSLGYRVKTAQDGVDALNVIGRN-EIDIVLTDVNMPN 912
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + ++GVT+ E++ ++AG+D C +KP+TM
Sbjct: 913 MDGYRLTQRLRELGKTFPVIGVTANALAEEKQRCIEAGMDNCLSKPVTM 961
>gi|168818004|ref|ZP_02830004.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|197247563|ref|YP_002147227.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Agona str. SL483]
gi|437820527|ref|ZP_20843232.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|440761650|ref|ZP_20940721.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
gi|440767199|ref|ZP_20946183.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|440773902|ref|ZP_20952791.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|197211266|gb|ACH48663.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205345045|gb|EDZ31809.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Weltevreden str. HI_N05-537]
gi|435307075|gb|ELO82268.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SARB17]
gi|436414265|gb|ELP12196.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Agona str. SH10GFN094]
gi|436420995|gb|ELP18847.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Agona str. SH08SF124]
gi|436424632|gb|ELP22400.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Agona str. SH11G1113]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|168237284|ref|ZP_02662342.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
gi|194734600|ref|YP_002115343.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Schwarzengrund str. CVM19633]
gi|194710102|gb|ACF89323.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197289636|gb|EDY28999.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Schwarzengrund str. SL480]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|161613012|ref|YP_001586977.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Paratyphi B str. SPB7]
gi|161362376|gb|ABX66144.1| hypothetical protein SPAB_00718 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|94264477|ref|ZP_01288265.1| PAS:Response regulator receiver:CHASE [delta proteobacterium
MLMS-1]
gi|93455108|gb|EAT05332.1| PAS:Response regulator receiver:CHASE [delta proteobacterium
MLMS-1]
Length = 876
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 69/111 (62%), Gaps = 5/111 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D+ R++ + +L++ G +V A NG+EAV+++R ++ +DM MP +DG EA
Sbjct: 758 LVAEDNEFNRQLLTDLLQNHGHRVLAANNGREAVEIYRD-KPCQLILMDMMMPELDGPEA 816
Query: 90 TKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
T+A+R ++ + I+GVT+ E + + AG+D C+TKP+ + ++
Sbjct: 817 TRAIRRLEAQGGSRIPIIGVTAGTQPEEIQKCLAAGMDCCFTKPVDIKTML 867
>gi|16761198|ref|NP_456815.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhi str. CT18]
gi|29141108|ref|NP_804450.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|289830050|ref|ZP_06547499.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhi str. E98-3139]
gi|378958740|ref|YP_005216226.1| Sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
gi|17433762|sp|Q56128.2|RCSC_SALTI RecName: Full=Sensor protein RcsC; AltName: Full=Capsular synthesis
regulator component C
gi|25298510|pir||AD0790 sensor protein RcsC (EC 2.7.3.-) [imported] - Salmonella enterica
subsp. enterica serovar Typhi (strain CT18)
gi|16503497|emb|CAD07502.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Typhi]
gi|29136734|gb|AAO68299.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Typhi str. Ty2]
gi|374352612|gb|AEZ44373.1| Sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Typhi str. P-stx-12]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|437763442|ref|ZP_20834911.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
gi|435308536|gb|ELO83469.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN, partial [Salmonella enterica subsp. enterica
serovar Enteritidis str. 76-2651]
Length = 952
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 819 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 877
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 878 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 933
>gi|429763231|ref|ZP_19295585.1| response regulator receiver domain protein [Anaerostipes hadrus DSM
3319]
gi|429179149|gb|EKY20409.1| response regulator receiver domain protein [Anaerostipes hadrus DSM
3319]
Length = 982
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 69/117 (58%), Gaps = 6/117 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA--KFHIVFIDMEMPVMDGI 87
L+V+D+ + I IL GF+V AENG EAV+ R A + +V +D++MPVM+G
Sbjct: 862 LLVEDNELNSEIAIAILNEYGFQVHTAENGAEAVEKIRNSAPGDYELVLMDIQMPVMNGY 921
Query: 88 EATKAMRAMK----VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
EA K +RA+ E I+ +T+ + +R+ ++ G+D +KP+ + +++ L+
Sbjct: 922 EAAKQIRALDDPALAEITILAMTANAFDEDRKKALECGMDGFLSKPIVIEELIHTLQ 978
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT----GAKFHIVFIDMEMPVM 84
ALV+DDD + +L VG + E +GKEAV R G FH ID +P M
Sbjct: 719 ALVIDDDFNTCDSVTKMLAKVGMRSEWTLSGKEAVLRARQSIELGDAFHAYIIDWRLPDM 778
Query: 85 DGIEATKAMRAMKVESKIVGVTSRN-SETEREVFMQAGLDLCYTKPLTMAKI 135
+GIE T+ +R++ ++ I+ +T+ + SE E E AG++ KP+ M+ I
Sbjct: 779 NGIEVTRQIRSLGDDTPIIILTAYDWSEIEAEA-RAAGVNAFCAKPIFMSDI 829
>gi|62180844|ref|YP_217261.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SC-B67]
gi|194444742|ref|YP_002041532.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. SL254]
gi|224583244|ref|YP_002637042.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|375115174|ref|ZP_09760344.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|418787815|ref|ZP_13343615.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|418794832|ref|ZP_13350548.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|418800103|ref|ZP_13355767.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|418805234|ref|ZP_13360822.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|418813961|ref|ZP_13369481.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|418814445|ref|ZP_13369959.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|418819410|ref|ZP_13374861.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|418829330|ref|ZP_13384312.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|418838541|ref|ZP_13393385.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|418839241|ref|ZP_13394078.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|418847218|ref|ZP_13401980.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|418852190|ref|ZP_13406895.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|418858694|ref|ZP_13413306.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|418864999|ref|ZP_13419514.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|418867264|ref|ZP_13421724.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
gi|62128477|gb|AAX66180.1| sensory histidine kinase in two-component regulatory system with
RcsB, regulates colanic capsule biosynthesis [Salmonella
enterica subsp. enterica serovar Choleraesuis str.
SC-B67]
gi|194403405|gb|ACF63627.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|224467771|gb|ACN45601.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Paratyphi C strain RKS4594]
gi|322715320|gb|EFZ06891.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Choleraesuis str. SCSA50]
gi|392760442|gb|EJA17279.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19449]
gi|392762733|gb|EJA19547.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19567]
gi|392765340|gb|EJA22128.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19447]
gi|392772295|gb|EJA28996.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22513]
gi|392784935|gb|EJA41516.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21550]
gi|392794239|gb|EJA50662.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21538]
gi|392794701|gb|EJA51093.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 22425]
gi|392796054|gb|EJA52404.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM N1543]
gi|392804561|gb|EJA60718.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM N18486]
gi|392808981|gb|EJA65028.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19443]
gi|392812952|gb|EJA68927.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 21554]
gi|392815720|gb|EJA71656.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 37978]
gi|392829085|gb|EJA84766.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19536]
gi|392831952|gb|EJA87577.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19470]
gi|392839684|gb|EJA95223.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 4176]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|336315070|ref|ZP_08569983.1| signal transduction histidine kinase [Rheinheimera sp. A13L]
gi|335880692|gb|EGM78578.1| signal transduction histidine kinase [Rheinheimera sp. A13L]
Length = 1019
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/121 (31%), Positives = 70/121 (57%), Gaps = 8/121 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD P +R + S +LKS G +++ A NG +A+ T F ++ +DM MPVMDG+ A
Sbjct: 809 LIVDDVPDLRLLFSTLLKSTGLEIQTAFNGLDAIQKV-TLEPFDLILMDMHMPVMDGLTA 867
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL-------TMAKIVPLLEEL 142
T+ +R + + ++ +T+ ++ + +QAG TKP+ +A+ +P +++
Sbjct: 868 TREIRRLGYQLPVIALTADVQVEQKRLCLQAGCHAVLTKPVQAQVLYSKIAEFLPAKKKV 927
Query: 143 Q 143
Q
Sbjct: 928 Q 928
>gi|409250879|ref|YP_006886687.1| two component sensor kinase/response regulator protein RcsC
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|417366576|ref|ZP_12138806.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
gi|320086707|emb|CBY96478.1| two component sensor kinase/response regulator protein RcsC
[Salmonella enterica subsp. enterica serovar Weltevreden
str. 2007-60-3289-1]
gi|353591548|gb|EHC49795.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Hvittingfoss str. A4-620]
Length = 915
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 782 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 840
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 841 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 896
>gi|375119823|ref|ZP_09764990.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|445147348|ref|ZP_21388104.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|445157831|ref|ZP_21392975.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
gi|326624090|gb|EGE30435.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Dublin str. SD3246]
gi|444844891|gb|ELX70117.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Dublin str. SL1438]
gi|444845912|gb|ELX71094.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Dublin str. HWS51]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|205353388|ref|YP_002227189.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
gi|205273169|emb|CAR38130.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Gallinarum str. 287/91]
Length = 915
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 782 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 840
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 841 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 896
>gi|198244777|ref|YP_002216340.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Dublin str. CT_02021853]
gi|197939293|gb|ACH76626.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
Length = 915
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 782 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 840
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 841 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 896
>gi|204929282|ref|ZP_03220425.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|375002088|ref|ZP_09726428.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|416421238|ref|ZP_11689351.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|416434722|ref|ZP_11697846.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|416437826|ref|ZP_11699035.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|416442723|ref|ZP_11702484.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|416449940|ref|ZP_11707084.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|416456092|ref|ZP_11711156.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|416470374|ref|ZP_11718829.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|416478764|ref|ZP_11721882.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|416486130|ref|ZP_11725010.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|416497024|ref|ZP_11729457.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|416506956|ref|ZP_11735098.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|416513923|ref|ZP_11738099.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|416544106|ref|ZP_11752675.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|416557135|ref|ZP_11759317.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|416575201|ref|ZP_11768293.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|416582576|ref|ZP_11772775.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|416590220|ref|ZP_11777615.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|416596820|ref|ZP_11781635.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|416604068|ref|ZP_11785929.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|416611012|ref|ZP_11790505.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|416617650|ref|ZP_11794276.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|416630549|ref|ZP_11800798.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|416638578|ref|ZP_11804047.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|416649341|ref|ZP_11809814.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|416665193|ref|ZP_11816518.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|416674121|ref|ZP_11821189.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|416690267|ref|ZP_11825809.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|416703551|ref|ZP_11829647.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|416711749|ref|ZP_11835529.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|416715679|ref|ZP_11838318.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|416722430|ref|ZP_11843362.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|416730577|ref|ZP_11848716.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|416740591|ref|ZP_11854514.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|416751238|ref|ZP_11860048.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|416754088|ref|ZP_11861112.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|416760669|ref|ZP_11864957.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|416769288|ref|ZP_11870978.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|418483327|ref|ZP_13052337.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|418490279|ref|ZP_13056827.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|418497059|ref|ZP_13063480.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|418501782|ref|ZP_13068161.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|418506130|ref|ZP_13072468.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|418507734|ref|ZP_13074043.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|418511600|ref|ZP_13077851.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|418526285|ref|ZP_13092263.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|452123897|ref|YP_007474145.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
gi|204321826|gb|EDZ07025.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Javiana str. GA_MM04042433]
gi|322617023|gb|EFY13929.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 315996572]
gi|322617671|gb|EFY14570.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-1]
gi|322624699|gb|EFY21528.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-3]
gi|322630248|gb|EFY27018.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 495297-4]
gi|322634429|gb|EFY31162.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-1]
gi|322639139|gb|EFY35831.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 515920-2]
gi|322640136|gb|EFY36802.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 531954]
gi|322645776|gb|EFY42300.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. NC_MB110209-0054]
gi|322651551|gb|EFY47926.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. OH_2009072675]
gi|322656112|gb|EFY52411.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CASC_09SCPH15965]
gi|322659464|gb|EFY55711.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 19N]
gi|322665926|gb|EFY62109.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 81038-01]
gi|322669836|gb|EFY65977.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. MD_MDA09249507]
gi|322673821|gb|EFY69918.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 414877]
gi|322678579|gb|EFY74635.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 366867]
gi|322683625|gb|EFY79639.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 413180]
gi|322687701|gb|EFY83671.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 446600]
gi|323196202|gb|EFZ81359.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 609458-1]
gi|323198370|gb|EFZ83472.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 556150-1]
gi|323204192|gb|EFZ89203.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 609460]
gi|323218249|gb|EGA02959.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB101509-0077]
gi|323222993|gb|EGA07342.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB102109-0047]
gi|323227428|gb|EGA11593.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB110209-0055]
gi|323232244|gb|EGA16347.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. MB111609-0052]
gi|323235723|gb|EGA19807.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009083312]
gi|323241117|gb|EGA25153.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 2009085258]
gi|323244859|gb|EGA28861.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 315731156]
gi|323248570|gb|EGA32501.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2009159199]
gi|323251590|gb|EGA35458.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008282]
gi|323255022|gb|EGA38812.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008283]
gi|323263083|gb|EGA46629.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008284]
gi|323268143|gb|EGA51620.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008285]
gi|323270764|gb|EGA54202.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008287]
gi|353076776|gb|EHB42536.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Salmonella enterica subsp. enterica serovar
Infantis str. SARB27]
gi|363554499|gb|EHL38735.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB31]
gi|363567065|gb|EHL51073.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. ATCC BAA710]
gi|363579076|gb|EHL62874.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 42N]
gi|366054863|gb|EHN19206.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035318]
gi|366061907|gb|EHN26151.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 80959-06]
gi|366065853|gb|EHN30039.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035320]
gi|366066203|gb|EHN30378.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035321]
gi|366066393|gb|EHN30562.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035278]
gi|366080502|gb|EHN44471.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. CT_02035327]
gi|366084450|gb|EHN48358.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Pomona str. ATCC 10729]
gi|366829097|gb|EHN55976.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 507440-20]
gi|372205841|gb|EHP19347.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. IA_2010008286]
gi|451912901|gb|AGF84707.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Javiana str. CFSAN001992]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|94263963|ref|ZP_01287765.1| Response regulator receiver [delta proteobacterium MLMS-1]
gi|93455635|gb|EAT05817.1| Response regulator receiver [delta proteobacterium MLMS-1]
Length = 914
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D P+ R I +L +VG +V++A NG+EAV++ R GA + V +D++MPV+DG A
Sbjct: 563 LVAEDHPLNREIAQELLTAVGIEVDMANNGREAVEMARQGA-YQGVLMDIQMPVLDGYRA 621
Query: 90 TKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T A+RA+ E I+ +T+ E ER+ ++A ++ +KP+
Sbjct: 622 TAAIRALPGGEELPIIAMTAHALEEERKKSLEAVMNDHVSKPV 664
>gi|386393413|ref|ZP_10078194.1| PAS domain S-box [Desulfovibrio sp. U5L]
gi|385734291|gb|EIG54489.1| PAS domain S-box [Desulfovibrio sp. U5L]
Length = 1340
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 67/105 (63%), Gaps = 5/105 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + R +L+S G +V +AENG+ A+D F + +V +D++MPVMDG+ A
Sbjct: 1091 LLVEDNRVNRVFAGDLLESRGHEVAMAENGRAALD-FLARERVDVVLMDIQMPVMDGLAA 1149
Query: 90 TKAMRA----MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+A+RA + +VG+++ + ERE F+ AGLD TKP+
Sbjct: 1150 TRAIRAGEDGIDPALPVVGLSAYAMDQERERFLAAGLDGYITKPI 1194
>gi|333984092|ref|YP_004513302.1| multi-sensor hybrid histidine kinase [Methylomonas methanica MC09]
gi|333808133|gb|AEG00803.1| multi-sensor hybrid histidine kinase [Methylomonas methanica MC09]
Length = 1099
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/125 (36%), Positives = 73/125 (58%), Gaps = 4/125 (3%)
Query: 21 VSKNRPYFALVVDDDPMIRRIHSMILKSV-GFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
++ +P F ++V +D + R+ + L GF+V+ AENG+EAV LF+ + H++ +D
Sbjct: 891 LAPGQPTFRILVAEDQLDNRLLLVNLLEPLGFQVKHAENGREAVTLFQEW-RPHLILMDR 949
Query: 80 EMPVMDGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVP 137
+MP+MDG+EATK +R A + KIV VT+ +R + AG+D +KP +I
Sbjct: 950 QMPIMDGVEATKVIRRLAEGRQVKIVAVTASAFSEQRTELLIAGMDSFISKPFQAGEIYE 1009
Query: 138 LLEEL 142
L L
Sbjct: 1010 CLSSL 1014
>gi|375124229|ref|ZP_09769393.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|445128906|ref|ZP_21380517.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
gi|326628479|gb|EGE34822.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Gallinarum str. SG9]
gi|444854561|gb|ELX79622.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Gallinarum str. 9184]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|168229631|ref|ZP_02654689.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
gi|194468800|ref|ZP_03074784.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|194455164|gb|EDX44003.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|205335848|gb|EDZ22612.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Kentucky str. CDC 191]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|197265671|ref|ZP_03165745.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|207857690|ref|YP_002244341.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|238913908|ref|ZP_04657745.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Tennessee str. CDC07-0191]
gi|421357522|ref|ZP_15807833.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|421361682|ref|ZP_15811941.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|421367252|ref|ZP_15817446.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|421371408|ref|ZP_15821567.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|421375482|ref|ZP_15825594.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|421379375|ref|ZP_15829444.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|421384404|ref|ZP_15834429.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|421388506|ref|ZP_15838496.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|421392949|ref|ZP_15842898.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|421397752|ref|ZP_15847664.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|421401989|ref|ZP_15851854.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|421407014|ref|ZP_15856823.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|421411535|ref|ZP_15861300.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|421418367|ref|ZP_15868069.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|421419794|ref|ZP_15869478.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|421424546|ref|ZP_15874188.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|421430557|ref|ZP_15880144.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|421434003|ref|ZP_15883554.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|421441631|ref|ZP_15891097.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|421444369|ref|ZP_15893800.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|421447220|ref|ZP_15896622.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|436795655|ref|ZP_20522428.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|436808422|ref|ZP_20527846.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|436817400|ref|ZP_20534482.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|436830643|ref|ZP_20535385.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|436849181|ref|ZP_20540350.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|436856777|ref|ZP_20545699.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|436862604|ref|ZP_20549287.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|436872263|ref|ZP_20555285.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|436880058|ref|ZP_20559892.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|436889123|ref|ZP_20565044.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|436897290|ref|ZP_20569937.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|436900884|ref|ZP_20571808.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|436909659|ref|ZP_20576383.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|436917411|ref|ZP_20580945.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|436927990|ref|ZP_20587484.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|436933941|ref|ZP_20590096.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|436942326|ref|ZP_20595309.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|436948629|ref|ZP_20598842.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|436957267|ref|ZP_20602935.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|436968371|ref|ZP_20607780.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|436986318|ref|ZP_20615408.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|436990892|ref|ZP_20617189.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|437004215|ref|ZP_20621944.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|437014522|ref|ZP_20625600.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|437026885|ref|ZP_20629896.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|437045101|ref|ZP_20637536.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|437048488|ref|ZP_20639527.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|437060926|ref|ZP_20646753.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|437067988|ref|ZP_20650620.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|437075309|ref|ZP_20653763.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|437080563|ref|ZP_20657167.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|437091078|ref|ZP_20663069.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|437102682|ref|ZP_20666710.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|437119896|ref|ZP_20671114.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|437127896|ref|ZP_20674986.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|437135858|ref|ZP_20679504.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|437143361|ref|ZP_20684228.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|437154831|ref|ZP_20691291.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|437157955|ref|ZP_20692909.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|437167877|ref|ZP_20699075.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|437173998|ref|ZP_20702069.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|437183688|ref|ZP_20707843.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|437258358|ref|ZP_20716395.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|437266847|ref|ZP_20720931.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|437282297|ref|ZP_20729172.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|437298026|ref|ZP_20732935.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|437313670|ref|ZP_20736838.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|437324700|ref|ZP_20739812.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|437336954|ref|ZP_20743163.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|437367466|ref|ZP_20748870.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|437408590|ref|ZP_20752475.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|437434397|ref|ZP_20756336.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|437459486|ref|ZP_20761165.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|437472672|ref|ZP_20765676.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|437497524|ref|ZP_20773512.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|437515023|ref|ZP_20777906.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|437532387|ref|ZP_20780894.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|437549335|ref|ZP_20783331.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|437573243|ref|ZP_20789519.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|437591548|ref|ZP_20794828.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|437600865|ref|ZP_20797401.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|437615330|ref|ZP_20802152.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|437660397|ref|ZP_20812469.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|437700527|ref|ZP_20823885.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|437705240|ref|ZP_20824913.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|437804752|ref|ZP_20839080.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|437903163|ref|ZP_20849939.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|438090506|ref|ZP_20860602.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|438111591|ref|ZP_20868392.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|445177204|ref|ZP_21397693.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|445191006|ref|ZP_21399729.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|445233941|ref|ZP_21406553.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|445238132|ref|ZP_21407232.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
gi|445335581|ref|ZP_21415476.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|445344831|ref|ZP_21417867.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|445363990|ref|ZP_21424829.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|197243926|gb|EDY26546.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|206709493|emb|CAR33837.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Enteritidis str. P125109]
gi|395988064|gb|EJH97225.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 640631]
gi|395991584|gb|EJI00708.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 622731-39]
gi|395992685|gb|EJI01797.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639016-6]
gi|396004085|gb|EJI13069.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-0424]
gi|396004397|gb|EJI13379.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-6]
gi|396006674|gb|EJI15636.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 485549-17]
gi|396019392|gb|EJI28248.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-22]
gi|396019849|gb|EJI28700.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-26]
gi|396020417|gb|EJI29262.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 596866-70]
gi|396031577|gb|EJI40303.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-50]
gi|396033199|gb|EJI41914.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629164-37]
gi|396033516|gb|EJI42223.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 639672-46]
gi|396038368|gb|EJI47007.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-2659]
gi|396045901|gb|EJI54492.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 77-1427]
gi|396047205|gb|EJI55781.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 78-1757]
gi|396055605|gb|EJI64090.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 8b-1]
gi|396060087|gb|EJI68534.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22510-1]
gi|396060988|gb|EJI69424.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648905 5-18]
gi|396063386|gb|EJI71780.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 6-18]
gi|396067854|gb|EJI76211.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 50-3079]
gi|396075053|gb|EJI83329.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 58-6482]
gi|434962275|gb|ELL55496.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS44]
gi|434967440|gb|ELL60256.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1882]
gi|434971849|gb|ELL64352.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1884]
gi|434983385|gb|ELL75181.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1594]
gi|434989036|gb|ELL80609.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1566]
gi|434990788|gb|ELL82318.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1580]
gi|434998853|gb|ELL90067.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1543]
gi|435000182|gb|ELL91330.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1441]
gi|435006362|gb|ELL97263.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1810]
gi|435008149|gb|ELL98975.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1558]
gi|435014417|gb|ELM04994.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1018]
gi|435021465|gb|ELM11833.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1010]
gi|435029083|gb|ELM19143.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1729]
gi|435031859|gb|ELM21814.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0895]
gi|435035032|gb|ELM24880.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0899]
gi|435042169|gb|ELM31901.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1457]
gi|435044347|gb|ELM34044.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1747]
gi|435055500|gb|ELM44912.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0968]
gi|435056922|gb|ELM46292.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1444]
gi|435060683|gb|ELM49930.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1445]
gi|435061544|gb|ELM50767.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1559]
gi|435069389|gb|ELM58391.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1565]
gi|435072957|gb|ELM61862.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1808]
gi|435080329|gb|ELM69010.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1455]
gi|435085050|gb|ELM73605.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1811]
gi|435086031|gb|ELM74576.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_0956]
gi|435090206|gb|ELM78610.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1725]
gi|435095595|gb|ELM83890.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1745]
gi|435098921|gb|ELM87150.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1575]
gi|435106116|gb|ELM94135.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1791]
gi|435113226|gb|ELN01075.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CDC_2010K_1795]
gi|435113394|gb|ELN01242.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 576709]
gi|435122773|gb|ELN10286.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 635290-58]
gi|435128495|gb|ELN15832.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-16]
gi|435129479|gb|ELN16775.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-19]
gi|435137647|gb|ELN24687.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607307-2]
gi|435138837|gb|ELN25852.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 629163]
gi|435140215|gb|ELN27178.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 607308-9]
gi|435150855|gb|ELN37519.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_N202]
gi|435153135|gb|ELN39750.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE15-1]
gi|435158230|gb|ELN44641.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_56-3991]
gi|435162225|gb|ELN48411.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_76-3618]
gi|435166687|gb|ELN52660.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_81-2490]
gi|435167859|gb|ELN53714.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL913]
gi|435176700|gb|ELN62067.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SL909]
gi|435178902|gb|ELN64077.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CVM_69-4941]
gi|435181901|gb|ELN66935.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 638970-15]
gi|435193813|gb|ELN78286.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 17927]
gi|435197303|gb|ELN81595.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. CHS4]
gi|435204843|gb|ELN88500.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 22-17]
gi|435207816|gb|ELN91248.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22558]
gi|435214079|gb|ELN96925.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 40-18]
gi|435222286|gb|ELO04408.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 1-1]
gi|435225181|gb|ELO07091.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642046 4-7]
gi|435225973|gb|ELO07571.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 4-1]
gi|435229275|gb|ELO10653.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648898 4-5]
gi|435243101|gb|ELO23397.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648899 3-17]
gi|435246831|gb|ELO26820.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648900 1-16]
gi|435246958|gb|ELO26946.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 1-17]
gi|435254424|gb|ELO33819.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 39-2]
gi|435261990|gb|ELO41134.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648902 6-8]
gi|435262661|gb|ELO41746.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648903 1-6]
gi|435268964|gb|ELO47517.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 653049 13-19]
gi|435273761|gb|ELO51986.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 561362 9-7]
gi|435292607|gb|ELO69363.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 543463 42-20]
gi|435302555|gb|ELO78513.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 33944]
gi|435316360|gb|ELO89515.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 81-2625]
gi|435320450|gb|ELO93084.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 6.0562-1]
gi|435330827|gb|ELP02068.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 53-407]
gi|444856486|gb|ELX81516.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE8a]
gi|444860956|gb|ELX85854.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. SE10]
gi|444868246|gb|ELX92891.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 20037]
gi|444874470|gb|ELX98716.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 18569]
gi|444879847|gb|ELY03937.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 13-1]
gi|444883389|gb|ELY07275.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. PT23]
gi|444891469|gb|ELY14718.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 436]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|16765598|ref|NP_461213.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|167549739|ref|ZP_02343498.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|167992601|ref|ZP_02573698.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168242383|ref|ZP_02667315.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|168261719|ref|ZP_02683692.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|194449775|ref|YP_002046325.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. SL476]
gi|200387073|ref|ZP_03213685.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|374982212|ref|ZP_09723534.1| Two-component sensor protein RcsC [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|378445700|ref|YP_005233332.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|378450979|ref|YP_005238338.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|378700181|ref|YP_005182138.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|378984833|ref|YP_005247988.1| hybrid two-component sensor kinase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|378989657|ref|YP_005252821.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|379701502|ref|YP_005243230.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|386592081|ref|YP_006088481.1| Two-component sensor protein RcsC [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|419728403|ref|ZP_14255368.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|419734287|ref|ZP_14261180.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|419737824|ref|ZP_14264594.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|419746298|ref|ZP_14272886.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|419750325|ref|ZP_14276787.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|421570299|ref|ZP_16015991.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|421576260|ref|ZP_16021863.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|421578115|ref|ZP_16023697.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|421585538|ref|ZP_16031035.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|422026556|ref|ZP_16372939.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|422031580|ref|ZP_16377738.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|427551475|ref|ZP_18928230.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|427568027|ref|ZP_18932951.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|427588416|ref|ZP_18937746.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|427611900|ref|ZP_18942607.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|427635622|ref|ZP_18947503.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|427656581|ref|ZP_18952269.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|427661824|ref|ZP_18957177.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|427671583|ref|ZP_18961993.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
gi|20139412|sp|P58662.1|RCSC_SALTY RecName: Full=Sensor protein RcsC; AltName: Full=Capsular synthesis
regulator component C
gi|16420809|gb|AAL21172.1| sensory histidine kinase in two-component regulatory system with
RcsB [Salmonella enterica subsp. enterica serovar
Typhimurium str. LT2]
gi|194408079|gb|ACF68298.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|199604171|gb|EDZ02716.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Virchow str. SL491]
gi|205325492|gb|EDZ13331.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205329183|gb|EDZ15947.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205338298|gb|EDZ25062.1| RcsC Alpha-Beta-Loop (ABL) family protein [Salmonella enterica
subsp. enterica serovar Heidelberg str. SL486]
gi|205349323|gb|EDZ35954.1| sensor kinase protein RcsC [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|229918798|gb|ACQ91083.1| RcsC [Salmonella enterica subsp. enterica serovar Typhimurium str.
SL1344]
gi|261247479|emb|CBG25306.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Typhimurium str. D23580]
gi|267994357|gb|ACY89242.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. 14028S]
gi|301158829|emb|CBW18342.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Typhimurium str. SL1344]
gi|312913261|dbj|BAJ37235.1| hybrid two-component sensor kinase [Salmonella enterica subsp.
enterica serovar Typhimurium str. T000240]
gi|321223029|gb|EFX48100.1| Two-component sensor protein RcsC [Salmonella enterica subsp.
enterica serovar Typhimurium str. TN061786]
gi|323130601|gb|ADX18031.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. ST4/74]
gi|332989204|gb|AEF08187.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. UK-1]
gi|381297945|gb|EIC39028.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41563]
gi|381299457|gb|EIC40529.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41579]
gi|381302777|gb|EIC43807.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41566]
gi|381303845|gb|EIC44859.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41573]
gi|381307199|gb|EIC48062.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. 41565]
gi|383799125|gb|AFH46207.1| Two-component sensor protein RcsC [Salmonella enterica subsp.
enterica serovar Heidelberg str. B182]
gi|402519058|gb|EJW26422.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00325]
gi|402525155|gb|EJW32449.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00322]
gi|402525692|gb|EJW32979.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00326]
gi|402530014|gb|EJW37239.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Heidelberg str. CFSAN00328]
gi|414017348|gb|EKT01078.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm1]
gi|414018253|gb|EKT01917.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm8]
gi|414019363|gb|EKT02978.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm2]
gi|414031866|gb|EKT14902.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm9]
gi|414033004|gb|EKT15982.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm3]
gi|414036285|gb|EKT19122.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm4]
gi|414046380|gb|EKT28711.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm10]
gi|414047320|gb|EKT29606.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm6]
gi|414052127|gb|EKT34194.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm11]
gi|414059052|gb|EKT40668.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhimurium str. STm12]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|418856576|ref|ZP_13411218.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
gi|392819085|gb|EJA74958.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Newport str. CVM 19593]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|416530291|ref|ZP_11744857.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|416532901|ref|ZP_11745910.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|416554279|ref|ZP_11758187.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|416567030|ref|ZP_11764157.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
gi|363551036|gb|EHL35357.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. LQC 10]
gi|363561564|gb|EHL45680.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 29N]
gi|363568854|gb|EHL52820.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. SARB30]
gi|363579380|gb|EHL63171.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 4441 H]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|254292589|ref|YP_003058612.1| Hpt sensor hybrid histidine kinase [Hirschia baltica ATCC 49814]
gi|254041120|gb|ACT57915.1| Hpt sensor hybrid histidine kinase [Hirschia baltica ATCC 49814]
Length = 943
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 74/137 (54%), Gaps = 11/137 (8%)
Query: 14 ARISENPVSKNRPYF----ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT- 68
A +S+N ++ F L DD+ + R + L ++ V+ AENG+EA+++
Sbjct: 647 AALSDNTAEQSHAQFEGVHVLAADDNAVNREVLREALSTLSVTVDFAENGQEALEMVNDK 706
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRA---MKVESK---IVGVTSRNSETEREVFMQAGL 122
K+ IVF+D MPVMDG EAT+ +RA + + K IVG+T++ + + G+
Sbjct: 707 STKYDIVFMDGSMPVMDGFEATRRIRAGEDARGKEKRLPIVGLTAQVQGLGADHWKDVGM 766
Query: 123 DLCYTKPLTMAKIVPLL 139
D C KP T+ ++V L
Sbjct: 767 DECLYKPFTIERLVSTL 783
>gi|86145971|ref|ZP_01064298.1| signal transduction histidine kinase [Vibrio sp. MED222]
gi|85836176|gb|EAQ54307.1| signal transduction histidine kinase [Vibrio sp. MED222]
Length = 574
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMD 85
Y LVV+D+P + + +IL G +V +A NG+EA+ G I+ +D+ MPVMD
Sbjct: 454 YSVLVVEDNPTNQMVIQLILARQGHEVFIASNGEEAIGFVERGNDPIDIILMDVSMPVMD 513
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
GI TK MR +++ IV +T+ S ++ + G++ TKP+ +I+ ++ L
Sbjct: 514 GITTTKYMRDANIKTPIVALTAHTSVEDKFSCLDVGMNDFITKPVRTKEIIEAIDRL 570
>gi|406865156|gb|EKD18199.1| hsp90-like protein [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 1521
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/153 (28%), Positives = 78/153 (50%), Gaps = 21/153 (13%)
Query: 8 ASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
ASS K I + L+V+D+ + +++ L++ G+ EVA +G EA+D+ R
Sbjct: 1344 ASSPSKTPIDHTKIK------VLIVEDNLVNQKVLQKQLRNRGYMTEVANHGGEALDILR 1397
Query: 68 T---------GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIV------GVTSRNSET 112
T G ++ +D+EMP+MDG+ + +R + + IV VT+
Sbjct: 1398 TSNFWSGVENGIDLAVILMDLEMPIMDGLTCARMIREFEADGTIVRHVPIIAVTANARLE 1457
Query: 113 EREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
+ E+ M AG+D +KP M +++P ++EL N
Sbjct: 1458 QIEMAMAAGMDNLVSKPFRMPELIPKIDELVLN 1490
>gi|292488814|ref|YP_003531701.1| Two component sensor kinase/response regulator protein RcsC
[Erwinia amylovora CFBP1430]
gi|428785765|ref|ZP_19003254.1| Two component sensor kinase/response regulator protein RcsC
[Erwinia amylovora ACW56400]
gi|291554248|emb|CBA21540.1| Two component sensor kinase/response regulator protein RcsC
[Erwinia amylovora CFBP1430]
gi|426275629|gb|EKV53358.1| Two component sensor kinase/response regulator protein RcsC
[Erwinia amylovora ACW56400]
Length = 987
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N LVVDD P+ R + S L S+G++V+ A++G +A+++ + IV D+ MP
Sbjct: 854 NDDILILVVDDHPINRMLLSDQLGSLGYRVKTAQDGVDALNVIGRN-EIDIVLTDVNMPN 912
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + ++GVT+ E++ ++AG+D C +KP+TM
Sbjct: 913 MDGYRLTQRLRELGKTFPVIGVTANALAEEKQRCIEAGMDNCLSKPVTM 961
>gi|256828233|ref|YP_003156961.1| multi-sensor hybrid histidine kinase [Desulfomicrobium baculatum
DSM 4028]
gi|256577409|gb|ACU88545.1| multi-sensor hybrid histidine kinase [Desulfomicrobium baculatum
DSM 4028]
Length = 1260
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 78/140 (55%), Gaps = 9/140 (6%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E S S++ R+++ ++ + L+VDD RR+ + LKS + AENGK A++
Sbjct: 755 EVVSESQRRRMTD---FHDKGWKVLLVDDVEANRRVVELFLKSSNVSIVHAENGKIALEK 811
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQA 120
F T F +V +DMEMPVMDG+EAT+ +RA + E + I+ +T+ + R+ M A
Sbjct: 812 F-TEEPFDLVLMDMEMPVMDGLEATRRIRAWEQEKREYKTPIIALTAHAFQEHRQKTMDA 870
Query: 121 GLDLCYTKPLTMAKIVPLLE 140
G KP+ ++ +++
Sbjct: 871 GCTEFLAKPIKKQALINIID 890
>gi|119470374|ref|ZP_01613102.1| Signal transduction histidine kinase [Alteromonadales bacterium
TW-7]
gi|119446299|gb|EAW27575.1| Signal transduction histidine kinase [Alteromonadales bacterium
TW-7]
Length = 573
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D+P+ I + IL + + E A+NGK A ++ T ++ ++F+D+ MP+MDG EA
Sbjct: 458 LVVEDNPLNMHILTRILSQLNYSYECAKNGKVACEM-ATKNEYQVIFMDLNMPIMDGFEA 516
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
K +R + I+ VT+ SE++ + +Q G + KP++ + +L
Sbjct: 517 IKKIRIFDANTPIIVVTANTSESDIAITIQLGANGHVFKPISTQALAEVL 566
>gi|384539505|ref|YP_005723589.1| putative two-component response regulator [Sinorhizobium meliloti
SM11]
gi|407723936|ref|YP_006843597.1| two-component response regulator [Sinorhizobium meliloti Rm41]
gi|433611486|ref|YP_007194947.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain protein [Sinorhizobium
meliloti GR4]
gi|336038158|gb|AEH84088.1| putative two-component response regulator [Sinorhizobium meliloti
SM11]
gi|407323996|emb|CCM72597.1| putative two-component response regulator [Sinorhizobium meliloti
Rm41]
gi|429556428|gb|AGA11348.1| Response regulators consisting of a CheY-like receiver domain and a
winged-helix DNA-binding domain protein [Sinorhizobium
meliloti GR4]
Length = 121
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M R + S L GF V +AENGK V+L + K ++ +DM +PVMDG EA
Sbjct: 5 LLVEDNEMNRDMLSRRLSRRGFDVLIAENGKAGVELAES-QKPDLILMDMSLPVMDGWEA 63
Query: 90 TKAMRAMKVESKI--VGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ ++A + S I + +T+ ++RE+ ++AG D +KP+ + ++V +E+L
Sbjct: 64 TRRIKANPLTSAIPVIALTAHAMASDREMALEAGCDDYDSKPVDLPQLVRKIEQL 118
>gi|163782893|ref|ZP_02177889.1| chemotaxis protein CheY [Hydrogenivirga sp. 128-5-R1-1]
gi|159882014|gb|EDP75522.1| chemotaxis protein CheY [Hydrogenivirga sp. 128-5-R1-1]
Length = 123
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/118 (36%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVVDD IR HS +L++ G++V+ AENG EA+++ K+ +V D+ MPVMDG E
Sbjct: 8 ALVVDDSLTIRIYHSSLLRNFGYEVDTAENGLEALEM-AMKKKYDLVLSDINMPVMDGFE 66
Query: 89 ATKAMRAMKVE--SKIVGVTSRNSETE-REVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
+ +R + + +V +T+ NSE + R+ FM G L KP+ + + +L+ +
Sbjct: 67 FVRKLRKLDEYRFTPVVFITTLNSEEDKRKAFMSGG-TLYIVKPINLQVLEKILKSIS 123
>gi|218778728|ref|YP_002430046.1| multi-sensor hybrid histidine kinase [Desulfatibacillum
alkenivorans AK-01]
gi|218760112|gb|ACL02578.1| multi-sensor hybrid histidine kinase [Desulfatibacillum
alkenivorans AK-01]
Length = 1022
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 68/116 (58%), Gaps = 15/116 (12%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D P + I L S G++V +AENG++AV+ FR F +VF+D++MP+MDG EA
Sbjct: 748 LLVEDYPANQFIAMEHLTSDGYRVALAENGQKAVEAFRK-KTFDLVFMDIQMPIMDGYEA 806
Query: 90 TKAMRAMKVESK--------------IVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
TK +RA++ E+ I+ +T+ RE ++A +D TKP++
Sbjct: 807 TKQIRALEAENAGEGNGDGSKKERCPIIAMTAHAFNGYREKCLEADMDDYITKPIS 862
>gi|383496972|ref|YP_005397661.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
gi|380463793|gb|AFD59196.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Typhimurium str. 798]
Length = 915
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 782 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 840
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 841 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 896
>gi|423140896|ref|ZP_17128534.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
gi|379053450|gb|EHY71341.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Salmonella enterica subsp. houtenae str. ATCC
BAA-1581]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 815 ADKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417324898|ref|ZP_12111030.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
gi|353577715|gb|EHC39792.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Adelaide str. A4-669]
Length = 675
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 542 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 600
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 601 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 656
>gi|218709447|ref|YP_002417068.1| Signal transduction histidine kinase [Vibrio splendidus LGP32]
gi|218322466|emb|CAV18619.1| Signal transduction histidine kinase [Vibrio splendidus LGP32]
Length = 574
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/117 (33%), Positives = 66/117 (56%), Gaps = 1/117 (0%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMD 85
Y LVV+D+P + + +IL G +V +A NG+EA+ G I+ +D+ MPVMD
Sbjct: 454 YSVLVVEDNPTNQMVIQLILARQGHEVFIASNGEEAIGFVERGNDPIDIILMDVSMPVMD 513
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
GI TK MR +++ IV +T+ S ++ + G++ TKP+ +I+ ++ L
Sbjct: 514 GITTTKYMRDANIKTPIVALTAHTSVEDKFSCLDVGMNDFITKPVRTKEIIEAIDRL 570
>gi|428316305|ref|YP_007114187.1| CheA signal transduction histidine kinase [Oscillatoria
nigro-viridis PCC 7112]
gi|428239985|gb|AFZ05771.1| CheA signal transduction histidine kinase [Oscillatoria
nigro-viridis PCC 7112]
Length = 936
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/131 (30%), Positives = 77/131 (58%), Gaps = 2/131 (1%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
++ E P S ++ LVVDD IR++ S+ L ++V A++G +A++ + G
Sbjct: 800 GKVHEIPPSSSKSPQILVVDDSYTIRQLLSLTLTRARYRVVQAKDGLDALEKLQNGLDCS 859
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESKI--VGVTSRNSETEREVFMQAGLDLCYTKPLT 131
+ +D+EMP MDG E +++R+ + +KI +TSR+ E R++ M+ G + +TKP +
Sbjct: 860 LAIVDIEMPRMDGFELLRSIRSTERFAKIPVAMLTSRSGEKHRQMAMELGANKYFTKPYS 919
Query: 132 MAKIVPLLEEL 142
A+++ + +L
Sbjct: 920 EAQLLQAIPKL 930
>gi|417392021|ref|ZP_12154996.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
gi|353613337|gb|EHC65453.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Minnesota str. A4-603]
Length = 687
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 554 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 612
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 613 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 668
>gi|417629485|ref|ZP_12279722.1| sensor kinase protein rcsC [Escherichia coli STEC_MHI813]
gi|345372232|gb|EGX04196.1| sensor kinase protein rcsC [Escherichia coli STEC_MHI813]
Length = 949
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/112 (33%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 21 VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDME 80
VS N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV D+
Sbjct: 819 VSDNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVLSDVN 877
Query: 81 MPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 878 MPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|417420297|ref|ZP_12160002.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
gi|353619347|gb|EHC69773.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Mississippi str. A4-633]
Length = 684
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 551 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 609
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 610 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 665
>gi|302902039|ref|XP_003048567.1| hypothetical protein NECHADRAFT_105157 [Nectria haematococca mpVI
77-13-4]
gi|256729500|gb|EEU42854.1| hypothetical protein NECHADRAFT_105157 [Nectria haematococca mpVI
77-13-4]
Length = 1152
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/122 (35%), Positives = 70/122 (57%), Gaps = 10/122 (8%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-----RTGAKFHIVFIDMEMPVM 84
L+VDD+ + ++ M +K F E AENG+EA+D F + +F + +D+ MPVM
Sbjct: 1030 LLVDDNKINLQLLVMFMKKCKFTYEEAENGQEALDKFTQRNLNSKKRFDYILMDISMPVM 1089
Query: 85 DGIEATKAMRAMKVESKI-----VGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
+GIEATK +R ++ E++I + +T S R + AG+D+ KP+ A++ LL
Sbjct: 1090 NGIEATKRIRQVERENQIQPTTVLALTGLASADARRDVLSAGVDVFLPKPVRFAELKKLL 1149
Query: 140 EE 141
E
Sbjct: 1150 TE 1151
>gi|242075126|ref|XP_002447499.1| hypothetical protein SORBIDRAFT_06g002020 [Sorghum bicolor]
gi|241938682|gb|EES11827.1| hypothetical protein SORBIDRAFT_06g002020 [Sorghum bicolor]
Length = 129
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVV+D + I +L + + ENGKEAVDLF G F IVF D +MP+M G E
Sbjct: 9 ALVVEDIKVDCMILMHMLHKLNCEAIAVENGKEAVDLFLEGKTFDIVFSDKDMPIMSGPE 68
Query: 89 ATKAMRAM-KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
A +RAM E KIVGV++ +E FM AG D+ KP+ + + +L+
Sbjct: 69 AVAKIRAMGATEVKIVGVSADFG--GQEAFMHAGADVFLPKPVKLETLESMLK 119
>gi|417342529|ref|ZP_12123314.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
gi|417532434|ref|ZP_12186814.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|353662753|gb|EHD01654.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Urbana str. R8-2977]
gi|357956521|gb|EHJ81923.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Baildon str. R6-199]
Length = 675
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 542 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 600
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 601 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 656
>gi|444350370|ref|YP_007386514.1| Two-component sensor protein RcsC (EC 2.7.3.-) [Enterobacter
aerogenes EA1509E]
gi|443901200|emb|CCG28974.1| Two-component sensor protein RcsC (EC 2.7.3.-) [Enterobacter
aerogenes EA1509E]
Length = 950
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P N LVVDD P+ RR+ + L S+G++ A +G +A+++ + IV D+
Sbjct: 818 PTVSNDDMMILVVDDHPINRRLLADQLGSLGYQCMTANDGVDALNVL-SKQHIDIVLSDV 876
Query: 80 EMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MP MDG T+ +R +++ ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 877 NMPNMDGYRLTQRIRQLEMTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|428205191|ref|YP_007089544.1| CheA signal transduction histidine kinase [Chroococcidiopsis
thermalis PCC 7203]
gi|428007112|gb|AFY85675.1| CheA signal transduction histidine kinase [Chroococcidiopsis
thermalis PCC 7203]
Length = 2059
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/109 (37%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
K P L++DD +R + SM + G++VE A +G+EA D R G +VF D+EMP
Sbjct: 1924 KTEP-LVLIIDDSITVRELLSMTFTNAGYRVEQARDGQEAWDKLRDGLPCDLVFCDIEMP 1982
Query: 83 VMDGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKP 129
MDG+E M+ + S+ I +TSR S+ R++ +Q G +TKP
Sbjct: 1983 RMDGLELLSRMQKEERLSQLPIAMLTSRGSDRHRQMALQLGASGYFTKP 2031
>gi|148555601|ref|YP_001263183.1| PAS/PAC sensor hybrid histidine kinase [Sphingomonas wittichii RW1]
gi|148500791|gb|ABQ69045.1| PAS/PAC sensor hybrid histidine kinase [Sphingomonas wittichii RW1]
Length = 624
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/123 (30%), Positives = 74/123 (60%), Gaps = 4/123 (3%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L+ +D+P+ RR+ + +L G V E+G++A+ T F +V +DM+MP +D
Sbjct: 364 PMRILLAEDNPINRRLMAGLLAREGHDVVAVEDGRKALGAVAT-QPFDLVLMDMQMPELD 422
Query: 86 GIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
GIEAT+A+RA+ ++ I+ +++ + R V+ +AG+D KP+ +++ ++ +
Sbjct: 423 GIEATRAIRALDPPASDTPILAISADSMPERRRVYFEAGIDSFLPKPIVSGQLLDMIGTM 482
Query: 143 QKN 145
++N
Sbjct: 483 RRN 485
>gi|428297287|ref|YP_007135593.1| integral membrane sensor hybrid histidine kinase [Calothrix sp. PCC
6303]
gi|428233831|gb|AFY99620.1| integral membrane sensor hybrid histidine kinase [Calothrix sp. PCC
6303]
Length = 759
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/124 (32%), Positives = 74/124 (59%), Gaps = 4/124 (3%)
Query: 21 VSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
++ N+P Y L+VDD P+ R++ +L +GF+++ A NG+EA++++ T H++++DM
Sbjct: 549 LAPNQPTYRLLIVDDKPLNRQLLIKLLSPLGFQLQEASNGQEAINIWETWEP-HLIWMDM 607
Query: 80 EMPVMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVP 137
M VMDG EAT+ ++ + ++ VT+ E E+ V + AG D KP +I
Sbjct: 608 RMTVMDGYEATQRIKNTTKGQATAVIAVTASVLEEEKAVVLSAGCDDFLRKPFREEEIFQ 667
Query: 138 LLEE 141
++ +
Sbjct: 668 VMHK 671
>gi|242812549|ref|XP_002485980.1| sensor histidine kinase/response regulator, putative [Talaromyces
stipitatus ATCC 10500]
gi|218714319|gb|EED13742.1| sensor histidine kinase/response regulator, putative [Talaromyces
stipitatus ATCC 10500]
Length = 1268
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/131 (33%), Positives = 79/131 (60%), Gaps = 8/131 (6%)
Query: 21 VSKNRPYFALVVDDDPM-IRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFID 78
+S P LVVDD+ + +R + + + + ++ AENGK AVD ++ + I+F+D
Sbjct: 1132 LSPATPVNVLVVDDNHINLRLLLTYLSRRNIANLDSAENGKMAVDAVEKRSEGYDIIFMD 1191
Query: 79 MEMPVMDGIEATKAMRAMKVE------SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
+ MPVM+G EAT+A+R+++ E + I+ +T +S + M +G+DL TKP+++
Sbjct: 1192 ISMPVMNGFEATRAIRSLENERDEKRPATIIALTGLSSARDETEAMTSGVDLFLTKPVSL 1251
Query: 133 AKIVPLLEELQ 143
++ LL+E Q
Sbjct: 1252 KEVSRLLDEWQ 1262
>gi|436619924|ref|ZP_20514570.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
gi|434964899|gb|ELL57866.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 22704]
Length = 707
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 574 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 632
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 633 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 688
>gi|428311153|ref|YP_007122130.1| PAS domain-containing protein [Microcoleus sp. PCC 7113]
gi|428252765|gb|AFZ18724.1| PAS domain S-box [Microcoleus sp. PCC 7113]
Length = 1152
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 46/106 (43%), Positives = 66/106 (62%), Gaps = 3/106 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVVDD R + +L SVGF+V A NG+EA++L+ + H++++DM MPVMDG
Sbjct: 922 YRILVVDDRLESRVLLVKLLASVGFEVLEAVNGQEAIELWSSWEP-HLIWMDMRMPVMDG 980
Query: 87 IEATKAMRA-MKVE-SKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
EATK ++A +K + + IV +T+ E ER V + AG D KP
Sbjct: 981 YEATKRIKADLKGQATAIVALTASAFEEERSVVLSAGCDDFVRKPF 1026
Score = 35.8 bits (81), Expect = 6.3, Method: Composition-based stats.
Identities = 26/116 (22%), Positives = 56/116 (48%), Gaps = 6/116 (5%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
KN P L++ + R++ L + + A NG+EA+ + G K ++ +D MP
Sbjct: 4 KNNP--ILIIGNRIENRQVFVQYLSQSKYDITQASNGEEALKIIENGLKPSLILLD--MP 59
Query: 83 VMDGIEATKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
G + T+ +R + + I+ + +N E ++ G++ T+PL+ +++
Sbjct: 60 HRGGSKVTQKIRKIWQAEQVPILWLIDKNQNQNWETGLEMGVNDYLTQPLSKEELI 115
>gi|400600246|gb|EJP67920.1| putative phytochrome-like histidine kinase PHY1p [Beauveria bassiana
ARSEF 2860]
Length = 1401
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 45/145 (31%), Positives = 78/145 (53%), Gaps = 16/145 (11%)
Query: 11 SKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA 70
S+ R + V++ P AL+ +DDP+ +I L+ G V A NG++ LF++ A
Sbjct: 1220 SQLGRPRNDSVAQEIPLRALIAEDDPINLKIVRKRLERAGHMVTHAVNGEDCAALFKSCA 1279
Query: 71 K-FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVG---VTSRNS------------ETER 114
I+ +DM+MP++DG+ +TK +R+M+ ES+I G V RN E +R
Sbjct: 1280 STVDIILMDMQMPIVDGLTSTKMIRSMEHESQIEGHSDVAKRNGRVPIIAVSASLVEGQR 1339
Query: 115 EVFMQAGLDLCYTKPLTMAKIVPLL 139
++++ AG D KP+ ++ L+
Sbjct: 1340 QMYIDAGFDAWILKPIDFKRLSVLM 1364
>gi|417374613|ref|ZP_12144318.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
gi|353598988|gb|EHC55280.1| sensor protein RcsC, partial [Salmonella enterica subsp. enterica
serovar Inverness str. R8-3668]
Length = 675
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 542 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 600
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 601 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 656
>gi|345873778|ref|ZP_08825671.1| multi-sensor hybrid histidine kinase [Thiorhodococcus drewsii AZ1]
gi|343916883|gb|EGV27708.1| multi-sensor hybrid histidine kinase [Thiorhodococcus drewsii AZ1]
Length = 1230
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/113 (30%), Positives = 69/113 (61%), Gaps = 3/113 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+DDP+ R + ++ + V+ AENG EA++ R ++ ++ +D++MPVMDG+EA
Sbjct: 1109 LLVEDDPINREVTLGLIAGLNLSVDAAENGAEALEFVRLN-RYDLILMDVQMPVMDGLEA 1167
Query: 90 TKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
T+ +R + E +V +T+ +RE ++AG+ KP+ +++ +L+
Sbjct: 1168 TRQIRKLPQAAEVPVVALTANVFAEDREQCLEAGMSDFLVKPIEPGRLMAVLQ 1220
>gi|329910714|ref|ZP_08275357.1| multi-sensor hybrid histidine kinase [Oxalobacteraceae bacterium
IMCC9480]
gi|327546114|gb|EGF31175.1| multi-sensor hybrid histidine kinase [Oxalobacteraceae bacterium
IMCC9480]
Length = 1105
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 66/118 (55%), Gaps = 2/118 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D+ + + + L G VE+A NG++AV + ++F V +D+ MPVMDG EA
Sbjct: 853 LVAEDNVINQMVIEQTLSGAGASVELASNGQDAVAATQRASRFTAVLMDIRMPVMDGYEA 912
Query: 90 TKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
T+ +RA ++ +T+ + E F QAG+ KPL +A ++ +L+ L ++
Sbjct: 913 TRLIRAQPGMASLPVLALTASARRQDHESFRQAGMSGVIAKPLAIADLLAMLDSLARH 970
>gi|437670015|ref|ZP_20815570.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
gi|435281776|gb|ELO59427.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 642044 8-1]
Length = 556
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 423 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 481
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 482 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 537
>gi|403667503|ref|ZP_10932808.1| transcriptional regulatory protein [Kurthia sp. JC8E]
Length = 239
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD+ IRR+ M L+ G+ ++ AENG+EAV+ ++H++ +D+ MPVMDG+EA
Sbjct: 8 LIVDDEDRIRRLLRMYLEREGYVIDEAENGQEAVEK-ALSTEYHVIILDIMMPVMDGLEA 66
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
A+R K + IV +T++ E R + G D KP + ++V
Sbjct: 67 CTAIREEKT-TPIVLLTAKGEEANRVEGFETGADDYIVKPFSPREVV 112
>gi|292899966|ref|YP_003539335.1| two-component system, sensor kinase and response regulator [Erwinia
amylovora ATCC 49946]
gi|291199814|emb|CBJ46937.1| two-component system, sensor kinase and response regulator [Erwinia
amylovora ATCC 49946]
Length = 956
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N LVVDD P+ R + S L S+G++V+ A++G +A+++ + IV D+ MP
Sbjct: 823 NDDILILVVDDHPINRMLLSDQLGSLGYRVKTAQDGVDALNVIGRN-EIDIVLTDVNMPN 881
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + ++GVT+ E++ ++AG+D C +KP+TM
Sbjct: 882 MDGYRLTQRLRELGKTFPVIGVTANALAEEKQRCIEAGMDNCLSKPVTM 930
>gi|16329398|ref|NP_440126.1| hybrid sensory kinase [Synechocystis sp. PCC 6803]
gi|383321139|ref|YP_005381992.1| hybrid sensory kinase Hik12 [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|383324309|ref|YP_005385162.1| hybrid sensory kinase Hik12 [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|383490193|ref|YP_005407869.1| hybrid sensory kinase Hik12 [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|384435459|ref|YP_005650183.1| hybrid sensory kinase Hik12 [Synechocystis sp. PCC 6803]
gi|451813557|ref|YP_007450009.1| hybrid sensory kinase [Synechocystis sp. PCC 6803]
gi|1651879|dbj|BAA16806.1| hybrid sensory kinase [Synechocystis sp. PCC 6803]
gi|339272491|dbj|BAK48978.1| hybrid sensory kinase Hik12 [Synechocystis sp. PCC 6803]
gi|359270458|dbj|BAL27977.1| hybrid sensory kinase Hik12 [Synechocystis sp. PCC 6803 substr.
GT-I]
gi|359273629|dbj|BAL31147.1| hybrid sensory kinase Hik12 [Synechocystis sp. PCC 6803 substr.
PCC-N]
gi|359276799|dbj|BAL34316.1| hybrid sensory kinase Hik12 [Synechocystis sp. PCC 6803 substr.
PCC-P]
gi|407957273|dbj|BAM50513.1| hybrid sensory kinase [Bacillus subtilis BEST7613]
gi|451779526|gb|AGF50495.1| hybrid sensory kinase [Synechocystis sp. PCC 6803]
Length = 834
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVVDD + R++ +L GF++E A NG+EA+ L+ + H++F+DM MPVMDG
Sbjct: 630 YKILVVDDKSVNRQLLIKLLAPFGFEIEEASNGQEAIALWESWEP-HLIFMDMRMPVMDG 688
Query: 87 IEATKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
EATK ++ + +V +T+ E E+ + + AG D KP
Sbjct: 689 YEATKYIKGQVKGNATAVVALTASVLEEEKAIVLSAGCDDFLRKPF 734
>gi|440227494|ref|YP_007334585.1| two component sensor kinase/response regulator hybrid [Rhizobium
tropici CIAT 899]
gi|440039005|gb|AGB72039.1| two component sensor kinase/response regulator hybrid [Rhizobium
tropici CIAT 899]
Length = 935
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 69/108 (63%), Gaps = 7/108 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D+ + + + + IL++ G + V ENG+ AVD +R + ++ +D+ MPVM+G +A
Sbjct: 805 LVAEDNEVNQIVFTQILQATGLRFLVVENGQAAVDAWRQ-LRPSLILMDVSMPVMNGHQA 863
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
T+ +R + ++ IVGVT++ + +R + MQ+G+D C +KP++
Sbjct: 864 TRTIRQFETQAGQGWHVPIVGVTAQALDVDRVMCMQSGMDDCISKPIS 911
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 11 SKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL----F 66
+ + +++E P + R L+V+DDP+ RRI + L GF VAE+G A+ + F
Sbjct: 621 AARGKVAELPANV-RDARVLIVEDDPIHRRILNEQLAQWGFDGHVAEDGGTALAILEAAF 679
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRA 95
G + +D MP M+G + A+RA
Sbjct: 680 DIGVSVDAIIVDDSMPGMNGYQIASALRA 708
>gi|401675701|ref|ZP_10807690.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Enterobacter sp. SST3]
gi|400217084|gb|EJO47981.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Enterobacter sp. SST3]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E+ S N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 816 ESLASVNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVLS 874
Query: 78 DMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 875 DVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|296103859|ref|YP_003614005.1| two-component system, NarL family, capsular synthesis sensor
histidine kinase RcsC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058318|gb|ADF63056.1| two-component system, NarL family, capsular synthesis sensor
histidine kinase RcsC [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E+ S N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 816 ESLASVNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVLS 874
Query: 78 DMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 875 DVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|392980009|ref|YP_006478597.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Enterobacter cloacae subsp. dissolvens SDM]
gi|392325942|gb|AFM60895.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Enterobacter cloacae subsp. dissolvens SDM]
Length = 948
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E+ S N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 816 ESLASVNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVLS 874
Query: 78 DMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 875 DVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|375146036|ref|YP_005008477.1| signal transduction histidine kinase [Niastella koreensis GR20-10]
gi|361060082|gb|AEV99073.1| signal transduction histidine kinase [Niastella koreensis GR20-10]
Length = 1347
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 71/114 (62%), Gaps = 6/114 (5%)
Query: 30 LVVDDDPMIRRIHSM--ILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGI 87
L+VDDD +R I+S+ +L+ G K VAENG+ A+++ IV +D+ MP MDG
Sbjct: 1230 LIVDDD--MRNIYSLTNVLEEEGMKCVVAENGRVAIEMLEKQPDTDIVLMDIMMPEMDGF 1287
Query: 88 EATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
EAT A+R M +K I+ +T++ + +RE ++AG+ +KP+ M +++ L+
Sbjct: 1288 EATMAIRKMNRFNKLPIIALTAKAMKGDREKCLEAGMSDYVSKPVNMEQLLSLM 1341
>gi|336363430|gb|EGN91820.1| Tco5, signal transduction HAMP domain histidine kinase [Serpula
lacrymans var. lacrymans S7.3]
Length = 1000
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF--------RTGA------- 70
P ALVVDDD + R I S +L +G V A+NG+ A+++ + G+
Sbjct: 849 PMVALVVDDDMLTRTIMSRMLSRLGCTVSTADNGETALEMIIGRISMQGQNGSSHVINMN 908
Query: 71 -------KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLD 123
K+ +VF+D +MP+M G+E +R M+ + +VGVT ++ ++ AG+D
Sbjct: 909 GSHEDSYKYDVVFLDNQMPIMSGLEVVSKLREMERDDFVVGVTGNALLEDQRAYIDAGVD 968
Query: 124 LCYTKPLTMAKIVPLL 139
TKP+ + ++ +L
Sbjct: 969 HILTKPVFESSLIKML 984
>gi|254486230|ref|ZP_05099435.1| sensory box histidine kinase/response regulator [Roseobacter sp.
GAI101]
gi|214043099|gb|EEB83737.1| sensory box histidine kinase/response regulator [Roseobacter sp.
GAI101]
Length = 845
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 73/129 (56%), Gaps = 12/129 (9%)
Query: 20 PVSKN-RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFID 78
P KN RP L+V+D+ + R + +L G KV A NG+ AVDL + F ++ +D
Sbjct: 597 PGKKNLRPSHILLVEDNEINRVVAREMLSGAGHKVTEAPNGQVAVDLAAVNS-FDLILMD 655
Query: 79 MEMPVMDGIEATKAMRA---MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT---- 131
+ MPVMDG AT+A+RA + ++ I+ +T+ E+E F+ G++ TKPL+
Sbjct: 656 ISMPVMDGRAATRAIRAGHGVCAKTPIIALTASAMADEQEAFLADGMNNILTKPLSQESL 715
Query: 132 ---MAKIVP 137
+AK VP
Sbjct: 716 NRVLAKHVP 724
>gi|254487929|ref|ZP_05101134.1| sensory box histidine kinase/response regulator [Roseobacter sp.
GAI101]
gi|214044798|gb|EEB85436.1| sensory box histidine kinase/response regulator [Roseobacter sp.
GAI101]
Length = 786
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/106 (37%), Positives = 67/106 (63%), Gaps = 6/106 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGIE 88
L+V+D+ + R + ++ S G +V A NG+EAV++ GA+ F ++F+D+ MPVMDG
Sbjct: 542 LLVEDNKINRIVAREMITSAGHQVSEAHNGREAVEM--AGAQAFDLIFMDISMPVMDGRG 599
Query: 89 ATKAMRA---MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
AT+A+RA ++ IV +T+ E+E F+ G++ TKPL+
Sbjct: 600 ATRAIRAGQGASAQTPIVALTANAMAEEQEAFLSDGMNYVLTKPLS 645
>gi|323483926|ref|ZP_08089301.1| two-component hybrid sensor kinase/response regulator [Clostridium
symbiosum WAL-14163]
gi|323693481|ref|ZP_08107689.1| sensor protein [Clostridium symbiosum WAL-14673]
gi|323402764|gb|EGA95087.1| two-component hybrid sensor kinase/response regulator [Clostridium
symbiosum WAL-14163]
gi|323502466|gb|EGB18320.1| sensor protein [Clostridium symbiosum WAL-14673]
Length = 409
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA-KFHIVFIDMEMPVMDGIE 88
L+V+D+ + I +L G V+VA +G EA++ FR K+ I+F+D++MPVMDG
Sbjct: 287 LLVEDNTLNAEIAQTLLTDYGLHVDVASDGNEALEFFRADTNKYDIIFMDVQMPVMDGYH 346
Query: 89 ATKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
AT A+R ++ ++ I+G+++ + + + + G+D TKP+ + K+ LL +
Sbjct: 347 ATAAIRDLESKNSKHSHTVIIGMSANAFKEDVDKALACGMDDYITKPIDIKKLQNLLRKF 406
Query: 143 QK 144
K
Sbjct: 407 CK 408
Score = 45.8 bits (107), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 13/116 (11%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI----VFIDMEMPVM 84
L+VDDD + ++LK +G E NG +AV + K H+ V +D +MP M
Sbjct: 144 CLIVDDDRDVCENTVLLLKEIGMHSEWVLNGADAVVYVESAHKRHLDYNAVILDWQMPDM 203
Query: 85 DGIEATKAMRAMKVESKIVGVTSRNSETE-----REVFMQAGLDLCYTKPLTMAKI 135
DGIE + +R ++ + + S TE REV + A L KPL +++
Sbjct: 204 DGIETARRIRNKVGDTLPIIILSAYDWTEIEDEAREVGITAFL----AKPLFKSRL 255
>gi|409990973|ref|ZP_11274279.1| two-component hybrid sensor and regulator, partial [Arthrospira
platensis str. Paraca]
gi|409938161|gb|EKN79519.1| two-component hybrid sensor and regulator, partial [Arthrospira
platensis str. Paraca]
Length = 483
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 74/119 (62%), Gaps = 4/119 (3%)
Query: 21 VSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
+++N+P Y LVVDD+ R++ +L +GF V AENG+EA+ ++ H++F+DM
Sbjct: 258 LAENQPEYRILVVDDNWTNRKLVVKLLNPLGFHVREAENGQEAIAIWEKWEP-HLIFMDM 316
Query: 80 EMPVMDGIEATKAM-RAMKVESK-IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
MPVMDG EAT+ + R +K ++ I+ +T+ + E+ + + AG D KP + +++
Sbjct: 317 RMPVMDGYEATQLIKRHLKGQATVIIALTASALQQEKSIVLSAGCDDFVRKPFRVDQLL 375
>gi|417359585|ref|ZP_12133923.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
gi|353589110|gb|EHC47978.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Give str. S5-487]
Length = 646
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 513 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 571
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 572 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 627
>gi|414069629|ref|ZP_11405621.1| two-component system, NarL family, sensor histidine kinase BarA
[Pseudoalteromonas sp. Bsw20308]
gi|410807859|gb|EKS13833.1| two-component system, NarL family, sensor histidine kinase BarA
[Pseudoalteromonas sp. Bsw20308]
Length = 1074
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 49/139 (35%), Positives = 76/139 (54%), Gaps = 6/139 (4%)
Query: 9 SSSKKARISENP--VSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
+S KA I+ P + K AL+VDD+P+ I S +LK + + A NG+EAV+
Sbjct: 744 ASESKATITPKPDNLIKFTGVKALIVDDNPLNIEITSAMLKKLDLDIVTAMNGQEAVECV 803
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCY 126
+ F I+F+D++MPVMDGI AT +R IV +T+ +++ + AG++
Sbjct: 804 KNNI-FDIIFMDIQMPVMDGILATSKIRENGETLPIVALTAAVLPEDKKAAIDAGMNDFL 862
Query: 127 TKPLTMAKIVPLLEELQKN 145
TKPL L + L+KN
Sbjct: 863 TKPLIFDM---LFQSLEKN 878
>gi|403057576|ref|YP_006645793.1| hypothetical protein PCC21_011370 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
gi|402804902|gb|AFR02540.1| hypothetical protein PCC21_011370 [Pectobacterium carotovorum
subsp. carotovorum PCC21]
Length = 935
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/131 (32%), Positives = 70/131 (53%), Gaps = 7/131 (5%)
Query: 8 ASSSKKARISENPV------SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+ S + RI +P ++N LVVDD P+ RR+ + L S+G++ A +G +
Sbjct: 784 SESEDRHRIEISPPLTSYVRAENGDIMILVVDDHPINRRLLADQLSSLGYQAMTANDGVD 843
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAG 121
A+ + + IV D+ MP MDG T+ MR + ++GVT+ ERE + AG
Sbjct: 844 ALGVL-SKNHIDIVLTDVNMPNMDGYLFTRRMREQGLRFPVIGVTANALAEERERCLGAG 902
Query: 122 LDLCYTKPLTM 132
+D C +KP+T+
Sbjct: 903 MDHCLSKPVTL 913
>gi|345865191|ref|ZP_08817381.1| sensory/regulatory protein RpfC [endosymbiont of Tevnia jerichonana
(vent Tica)]
gi|345123689|gb|EGW53579.1| sensory/regulatory protein RpfC [endosymbiont of Tevnia jerichonana
(vent Tica)]
Length = 1565
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + R + +L G V+ AENG+EAV + R A + +V +D++MP MDG EA
Sbjct: 1189 LLVEDNAINREVAMELLSGAGLAVDTAENGREAVTMVRATA-YDLVLMDIQMPEMDGREA 1247
Query: 90 TKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL-------TMAKIVP 137
T+ +R+M K I+ +T+ E +R+ ++AG++ KP+ T+AK +P
Sbjct: 1248 TRVIRSMASKAALPILAMTANVFEEDRQACLEAGMNDFIAKPVDPESLFSTIAKWLP 1304
>gi|417824497|ref|ZP_12471087.1| his Kinase A domain protein [Vibrio cholerae HE48]
gi|340047501|gb|EGR08425.1| his Kinase A domain protein [Vibrio cholerae HE48]
Length = 570
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/131 (26%), Positives = 73/131 (55%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
K++ S + + + LVV+D + + ++L +G+ V +AENG +AV+L
Sbjct: 437 KQSTSSSQQIVNVKNHHILVVEDTKTNQMVIQLLLNKLGYDVTIAENGLQAVELLEKNHV 496
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F +V +D+ MP+MDGI ATK +R ++ I+ +T+ + ++++ + G++ KP+
Sbjct: 497 FDLVLMDISMPIMDGIAATKILRDKHIDIPIIALTAHTAGSDKQNCIDVGMNDIVLKPIR 556
Query: 132 MAKIVPLLEEL 142
I+ +++
Sbjct: 557 SKDIMEVVKRF 567
>gi|336381482|gb|EGO22634.1| BaeS type histidine kinase [Serpula lacrymans var. lacrymans S7.9]
Length = 1009
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 71/136 (52%), Gaps = 22/136 (16%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF--------RTGA------- 70
P ALVVDDD + R I S +L +G V A+NG+ A+++ + G+
Sbjct: 858 PMVALVVDDDMLTRTIMSRMLSRLGCTVSTADNGETALEMIIGRISMQGQNGSSHVINMN 917
Query: 71 -------KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLD 123
K+ +VF+D +MP+M G+E +R M+ + +VGVT ++ ++ AG+D
Sbjct: 918 GSHEDSYKYDVVFLDNQMPIMSGLEVVSKLREMERDDFVVGVTGNALLEDQRAYIDAGVD 977
Query: 124 LCYTKPLTMAKIVPLL 139
TKP+ + ++ +L
Sbjct: 978 HILTKPVFESSLIKML 993
>gi|417476474|ref|ZP_12170984.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
gi|353640763|gb|EHC85661.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Rubislaw str. A4-653]
Length = 497
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 364 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 422
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 423 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 478
>gi|417350228|ref|ZP_12128665.1| Two-component sensor protein RcsC [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|417519391|ref|ZP_12181545.1| Two-component sensor protein RcsC [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
gi|353570675|gb|EHC34878.1| Two-component sensor protein RcsC [Salmonella enterica subsp.
enterica serovar Gaminara str. A4-567]
gi|353646723|gb|EHC90055.1| Two-component sensor protein RcsC [Salmonella enterica subsp.
enterica serovar Uganda str. R8-3404]
Length = 497
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 364 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 422
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 423 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 478
>gi|336251307|ref|YP_004595017.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Enterobacter aerogenes KCTC 2190]
gi|334737363|gb|AEG99738.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Enterobacter aerogenes KCTC 2190]
Length = 950
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/113 (31%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P N LVVDD P+ RR+ + L S+G++ A +G +A+++ + IV D+
Sbjct: 818 PTVSNDDMMILVVDDHPINRRLLADQLGSLGYQCVTANDGVDALNVL-SKQHIDIVLSDV 876
Query: 80 EMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MP MDG T+ +R +++ ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 877 NMPNMDGYRLTQRIRQLEMTLPVIGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|118470690|ref|YP_884659.1| two component response transcriptional regulatory protein prra
[Mycobacterium smegmatis str. MC2 155]
gi|118171977|gb|ABK72873.1| two component response transcriptional regulatory protein prra
[Mycobacterium smegmatis str. MC2 155]
Length = 246
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
S P NR L+VDDDP +R + L+ GF V VA +GKEA+ L T + +V
Sbjct: 13 SRAPEGVNRT--VLMVDDDPDVRTSVARGLRHSGFDVRVAASGKEALRLLSTESHDALV- 69
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
+D++MP +DG+ A+RA+ + I +++R++ +R ++AG D TKP + ++V
Sbjct: 70 LDVQMPELDGVAVVTALRALGNDIPICVLSARDTVNDRIAGLEAGADDYLTKPFDLGELV 129
Query: 137 PLLEELQK 144
L L +
Sbjct: 130 ARLHALLR 137
>gi|337281043|ref|YP_004620515.1| histidine kinase [Ramlibacter tataouinensis TTB310]
gi|334732120|gb|AEG94496.1| candidate histidine kinase, unorthodox [Ramlibacter tataouinensis
TTB310]
Length = 919
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/103 (37%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D+ + +++ + +L+S G VEVAE+G+ A+DL + +VF+DM+MPVMDG+ A
Sbjct: 665 LVVEDNEINQQVVTELLQSAGLVVEVAEHGRAALDLLAC-RDYDLVFMDMQMPVMDGLTA 723
Query: 90 TKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +R ++ K +V VT+ E R ++AG++ KP+
Sbjct: 724 TREIRKIERLRKLPVVAVTASVMEQNRRDCLEAGMNAFLAKPI 766
>gi|242038167|ref|XP_002466478.1| hypothetical protein SORBIDRAFT_01g008510 [Sorghum bicolor]
gi|241920332|gb|EER93476.1| hypothetical protein SORBIDRAFT_01g008510 [Sorghum bicolor]
Length = 201
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 70/119 (58%), Gaps = 5/119 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSV--GFKVEVAENGKEAVDLFRTGAK---FHIVFIDMEMPVM 84
L+V+D+ + R + +L+S G +++ A G EAV R G + ++ D +MPVM
Sbjct: 81 LLVEDEEIHRVLARALLRSAVGGVELDEARTGAEAVRRVRDGGAAGAYDLIITDGKMPVM 140
Query: 85 DGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
DG EAT+ +RAM V + IVG++S ++ + F++AG D KPL+ K+V +L +
Sbjct: 141 DGREATRQIRAMGVTTPIVGLSSDTFPSDVDAFLKAGADDFTPKPLSKEKLVRILAKFN 199
>gi|441201911|ref|ZP_20971060.1| response regulator [Mycobacterium smegmatis MKD8]
gi|440630601|gb|ELQ92372.1| response regulator [Mycobacterium smegmatis MKD8]
Length = 242
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
S P NR L+VDDDP +R + L+ GF V VA +GKEA+ L T + +V
Sbjct: 9 SRAPEGVNRT--VLMVDDDPDVRTSVARGLRHSGFDVRVAASGKEALRLLSTESHDALV- 65
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
+D++MP +DG+ A+RA+ + I +++R++ +R ++AG D TKP + ++V
Sbjct: 66 LDVQMPELDGVAVVTALRALGNDIPICVLSARDTVNDRIAGLEAGADDYLTKPFDLGELV 125
Query: 137 PLLEELQK 144
L L +
Sbjct: 126 ARLHALLR 133
>gi|340000018|ref|YP_004730901.1| sensor protein RcsC [Salmonella bongori NCTC 12419]
gi|339513379|emb|CCC31129.1| sensor protein RcsC [Salmonella bongori NCTC 12419]
Length = 948
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV D+ MP
Sbjct: 822 NDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVLSDVNMPN 880
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 881 MDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|218709788|ref|YP_002417409.1| hypothetical protein VS_1800 [Vibrio splendidus LGP32]
gi|218322807|emb|CAV18984.1| hypothetical protein VS_1800 [Vibrio splendidus LGP32]
Length = 565
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD M + I +L+ + +A NG E ++L + ++ IVF+D MPVMDG EA
Sbjct: 453 LVVDDIKMNQIIIQQMLRKYEIEPAIAGNGIEGLEL-ASNNEYDIVFMDCRMPVMDGFEA 511
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
TK +R+ I+ +T+ ++ ERE+ +++G+D +KP T +V +L +
Sbjct: 512 TKKLRSSGYSQPIIALTAGTTKEERELCIESGMDDILSKPYTANDLVIMLNK 563
>gi|126661522|ref|ZP_01732570.1| hybrid sensory kinase [Cyanothece sp. CCY0110]
gi|126617188|gb|EAZ88009.1| hybrid sensory kinase [Cyanothece sp. CCY0110]
Length = 611
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y L+VDD P R + +L+ VGF+++ A NG+EA++ + T H++F+DM MPVMDG
Sbjct: 404 YKILIVDDHPANRLLLIKLLQPVGFELQQATNGQEAIEKWETWQP-HLIFMDMRMPVMDG 462
Query: 87 IEATKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
EAT+ ++ + + IV +T+ E E+ + + AG D KP + I ++ +
Sbjct: 463 YEATQYIKGIIKGNATAIVALTASFLEEEKAIVLSAGCDDFIRKPFQESVIFDVISK 519
>gi|86146268|ref|ZP_01064593.1| hypothetical protein MED222_16191 [Vibrio sp. MED222]
gi|85835979|gb|EAQ54112.1| hypothetical protein MED222_16191 [Vibrio sp. MED222]
Length = 565
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD M + I +L+ + +A NG E ++L + ++ IVF+D MPVMDG EA
Sbjct: 453 LVVDDIKMNQIIIQQMLRKYEIEPAIAGNGIEGLEL-ASNNEYDIVFMDCRMPVMDGFEA 511
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
TK +R+ I+ +T+ ++ ERE+ +++G+D +KP T +V +L +
Sbjct: 512 TKKLRSSGYSQPIIALTAGTTKEERELCIESGMDDILSKPYTANDLVIMLNK 563
>gi|416657425|ref|ZP_11813683.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|417384403|ref|ZP_12149788.1| sensory kinase TorS [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|417512140|ref|ZP_12176551.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|437733669|ref|ZP_20832060.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
gi|323212345|gb|EFZ97168.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Montevideo str. 556152]
gi|353608990|gb|EHC62419.1| sensory kinase TorS [Salmonella enterica subsp. enterica serovar
Johannesburg str. S5-703]
gi|353640746|gb|EHC85651.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Senftenberg str. A4-543]
gi|435286998|gb|ELO64222.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 648901 16-16]
Length = 646
Score = 70.9 bits (172), Expect = 1e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 513 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 571
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 572 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 627
>gi|224373295|ref|YP_002607667.1| sensor histidine kinase/response regulator [Nautilia profundicola
AmH]
gi|223588528|gb|ACM92264.1| sensor histidine kinase/response regulator [Nautilia profundicola
AmH]
Length = 1030
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 73/118 (61%), Gaps = 6/118 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA-KFHIVFIDMEMPVMDGI 87
AL+ +D+P+ +++ LKS+G + ++A NG EA + + K+ ++F+D++MPVMDG+
Sbjct: 771 ALIAEDNPINQKLLQTTLKSLGIESDLANNGLEAFNKYTINPDKYDVIFMDVQMPVMDGL 830
Query: 88 EATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
EAT+ + + + I+ VT+ + +RE F+ +G+D +KP+ ++ +LE
Sbjct: 831 EATQEILEFEQEEEIPHTPIIAVTANVLKGDRERFLGSGMDEYISKPIEKDALLKILE 888
>gi|125973324|ref|YP_001037234.1| PAS/PAC sensor hybrid histidine kinase [Clostridium thermocellum
ATCC 27405]
gi|256005431|ref|ZP_05430394.1| multi-sensor hybrid histidine kinase [Clostridium thermocellum DSM
2360]
gi|385778763|ref|YP_005687928.1| multi-sensor hybrid histidine kinase [Clostridium thermocellum DSM
1313]
gi|419722127|ref|ZP_14249276.1| PAS sensor protein [Clostridium thermocellum AD2]
gi|419724874|ref|ZP_14251931.1| PAS sensor protein [Clostridium thermocellum YS]
gi|125713549|gb|ABN52041.1| multi-sensor hybrid histidine kinase [Clostridium thermocellum ATCC
27405]
gi|255990571|gb|EEU00690.1| multi-sensor hybrid histidine kinase [Clostridium thermocellum DSM
2360]
gi|316940443|gb|ADU74477.1| multi-sensor hybrid histidine kinase [Clostridium thermocellum DSM
1313]
gi|380771763|gb|EIC05626.1| PAS sensor protein [Clostridium thermocellum YS]
gi|380781881|gb|EIC11530.1| PAS sensor protein [Clostridium thermocellum AD2]
Length = 902
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
Query: 8 ASSSKKARISENPVSK--NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
A SS KA + N + R L+ +DD + +++ + +LK + +AENG EA+ L
Sbjct: 644 AKSSVKAECTSNADERVLGRKLNILLAEDDKVNQQVIAGMLKKEQCSLTIAENGFEAIKL 703
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAG 121
F +F ++ +D++MP MDGIEATK +R M+ + I+ VT+ E +RE ++AG
Sbjct: 704 FEEN-EFDLILMDVQMPEMDGIEATKRIRKMEEGTFRHIPIIAVTAFAFENDREKILEAG 762
Query: 122 LDLCYTKPLTMAKI 135
+D +KP + I
Sbjct: 763 MDDYISKPFSFDDI 776
>gi|213857465|ref|ZP_03384436.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Typhi str. M223]
Length = 513
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 380 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 438
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 439 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 494
>gi|117926468|ref|YP_867085.1| PAS/PAC sensor hybrid histidine kinase [Magnetococcus marinus MC-1]
gi|117610224|gb|ABK45679.1| multi-sensor hybrid histidine kinase [Magnetococcus marinus MC-1]
Length = 1075
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/130 (33%), Positives = 75/130 (57%), Gaps = 8/130 (6%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E+ N P LVVDD R + ++ LK + + +AENG EAV+ F+ F +V +
Sbjct: 947 ESAAHHNDPI--LVVDDAEDNRMLVNVFLKKTRYTLVMAENGLEAVNAFKQ-QPFALVLM 1003
Query: 78 DMEMPVMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D++MP+MDG EAT+ +R + + + I+ +T+ E + ++AG D+ TKP+
Sbjct: 1004 DIQMPLMDGYEATRQIRQWEQQKGSGRTPIIALTAHALSEESQQILEAGCDIHLTKPIRK 1063
Query: 133 AKIVPLLEEL 142
+K++ +L E+
Sbjct: 1064 SKLLEVLAEV 1073
>gi|281417527|ref|ZP_06248547.1| multi-sensor hybrid histidine kinase [Clostridium thermocellum
JW20]
gi|281408929|gb|EFB39187.1| multi-sensor hybrid histidine kinase [Clostridium thermocellum
JW20]
Length = 902
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 76/134 (56%), Gaps = 7/134 (5%)
Query: 8 ASSSKKARISENPVSK--NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
A SS KA + N + R L+ +DD + +++ + +LK + +AENG EA+ L
Sbjct: 644 AKSSVKAECTSNADERVLGRKLNILLAEDDKVNQQVIAGMLKKEQCSLTIAENGFEAIKL 703
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAG 121
F +F ++ +D++MP MDGIEATK +R M+ + I+ VT+ E +RE ++AG
Sbjct: 704 FEEN-EFDLILMDVQMPEMDGIEATKRIRKMEEGTFRHIPIIAVTAFAFENDREKILEAG 762
Query: 122 LDLCYTKPLTMAKI 135
+D +KP + I
Sbjct: 763 MDDYISKPFSFDDI 776
>gi|87121408|ref|ZP_01077297.1| Serine/Threonine protein kinase and Signal Transduction Histidine
Kinase (STHK) with GAF sensor [Marinomonas sp. MED121]
gi|86163251|gb|EAQ64527.1| Serine/Threonine protein kinase and Signal Transduction Histidine
Kinase (STHK) with GAF sensor [Marinomonas sp. MED121]
Length = 2241
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/103 (34%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + R + +L G KV++A NG++AV+L +H++ +D++MP+MDG+ A
Sbjct: 1893 LLVEDNEINRHVALELLSETGIKVDIALNGQDAVNLVSVN-DYHLILMDIQMPIMDGLTA 1951
Query: 90 TKAMRAMKV--ESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
TK +R +K E I+ +T+ +E+E + AG++ TKP+
Sbjct: 1952 TKRIRQLKSKEELPIIAMTAHAMPSEKEKSLIAGMNDHLTKPI 1994
Score = 47.0 bits (110), Expect = 0.003, Method: Composition-based stats.
Identities = 30/120 (25%), Positives = 64/120 (53%), Gaps = 7/120 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK----FHIVFIDMEMPVMD 85
LVVDD+P+ +++ S +L + A +G +AV+ + A F +V +D +MP MD
Sbjct: 1744 LVVDDNPISQQVISRMLGHLNISCTQANDGSKAVECVQDAASKNTHFDMVIMDWKMPNMD 1803
Query: 86 GIEATKAMRA---MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
GIEA++ ++ + I+ +++ + + + + +D KP++ + +V + E+
Sbjct: 1804 GIEASRIIKQELELDTPPHILMLSAYDRDEVKLLGSPITIDHYLEKPVSQSTLVETIGEV 1863
>gi|421601056|ref|ZP_16043942.1| two-component hybrid sensor and regulator [Bradyrhizobium sp.
CCGE-LA001]
gi|404266837|gb|EJZ31631.1| two-component hybrid sensor and regulator [Bradyrhizobium sp.
CCGE-LA001]
Length = 896
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/143 (29%), Positives = 74/143 (51%), Gaps = 11/143 (7%)
Query: 1 MMIGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGK 60
+++ A GA + P S +RP L+VDDDP+ + IL +G + +A NG
Sbjct: 630 LVLAASGAQGA--------PASPSRPLRVLLVDDDPVNCEVGEAILTRLGHRATIARNGT 681
Query: 61 EAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES--KIVGVTSRNSETEREVFM 118
A++L + F ++ +D+ MP MDG+EA +R + + +I+ VT+ S RE
Sbjct: 682 SAIEL-ASDQVFDVILMDLHMPDMDGVEAASKIRKLGLARMPRIIAVTADVSTNARERLA 740
Query: 119 QAGLDLCYTKPLTMAKIVPLLEE 141
AG+ +KP+ + + +E+
Sbjct: 741 GAGIGKVVSKPILINALREAIED 763
>gi|354598627|ref|ZP_09016644.1| integral membrane sensor hybrid histidine kinase [Brenneria sp.
EniD312]
gi|353676562|gb|EHD22595.1| integral membrane sensor hybrid histidine kinase [Brenneria sp.
EniD312]
Length = 954
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ RR+ + L S+G+ A +G +A+ + IV D+ MP MDG
Sbjct: 829 LVVDDHPINRRLLADQLGSLGYMALTANDGVDALSVLSKNT-VDIVLTDVNMPNMDGYRL 887
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
T+ +R +K ++GVT+ ER+ +Q+G+D C +KP+T+
Sbjct: 888 TQRLRELKRTFPVIGVTANALAEERQRCLQSGMDNCLSKPVTL 930
>gi|350531306|ref|ZP_08910247.1| Signal transduction histidine kinase [Vibrio rotiferianus DAT722]
Length = 1034
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/144 (27%), Positives = 82/144 (56%), Gaps = 6/144 (4%)
Query: 5 AEGASSSKKARISENPV-SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
A+ ++ + I E+P + N+ L+V+D+ + +++ S++L G++ E+AENG+ AV
Sbjct: 890 ADKPEAAATSIIEESPKNTANKNGRILLVEDNNVNQKVASLLLNKAGYQFEIAENGQVAV 949
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFM 118
D+F+ F I+ +D MP+ DG EAT+ +R + +S I+ +T+ + + +
Sbjct: 950 DMFQQDRGFDIILMDCMMPIKDGFEATREIRQFEQDSGLSKTPIIALTASVVDDDIQRCF 1009
Query: 119 QAGLDLCYTKPLTMAKIVPLLEEL 142
+G+D KP+ K++ +E +
Sbjct: 1010 DSGMDAYVPKPIRKEKLIHQIESV 1033
Score = 55.8 bits (133), Expect = 6e-06, Method: Composition-based stats.
Identities = 26/70 (37%), Positives = 48/70 (68%), Gaps = 1/70 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD+ + ++I + ++ GF + A +G+EA++L++ ++ I+ +D MPVMDG EA
Sbjct: 772 LIVDDNNVNQKIAGLHVRKAGFDFDFANDGQEALELYQAN-QYCIILMDCMMPVMDGFEA 830
Query: 90 TKAMRAMKVE 99
TK +R ++ E
Sbjct: 831 TKRIRQIEAE 840
>gi|417321705|ref|ZP_12108239.1| putative two-component sensor [Vibrio parahaemolyticus 10329]
gi|328469859|gb|EGF40770.1| putative two-component sensor [Vibrio parahaemolyticus 10329]
Length = 632
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/128 (32%), Positives = 79/128 (61%), Gaps = 8/128 (6%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++NP ++P+ L+V+D + +R+ +IL+ +G KV VA +G+EA+ L R A F ++F
Sbjct: 497 NKNP---DKPW-VLIVEDTEVNQRVVRIILEQLGLKVSVASHGEEALQLCREHA-FDLIF 551
Query: 77 IDMEMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+D +MPVMDG AT+ +R M I+ +T+ + +++ +AG++ KP+T A
Sbjct: 552 MDCQMPVMDGFIATEQIRDMNEWGAHVPIIALTANVVKEDQQRCFEAGMNEFVAKPVTKA 611
Query: 134 KIVPLLEE 141
++ + E+
Sbjct: 612 RLQQIFEQ 619
>gi|288940436|ref|YP_003442676.1| multi-sensor hybrid histidine kinase [Allochromatium vinosum DSM
180]
gi|288895808|gb|ADC61644.1| multi-sensor hybrid histidine kinase [Allochromatium vinosum DSM
180]
Length = 729
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/131 (34%), Positives = 78/131 (59%), Gaps = 7/131 (5%)
Query: 6 EGASSSKKARISENPVSKNRPYFA----LVVDDDPMIRRIHSMILKSVGFKVEVAENGKE 61
+G S+ +A +SEN ++ R A L+V+D+P+ + I +LK VG V+ A++G+E
Sbjct: 581 KGESAEPEAPVSENAGTRLRRDQAGRRVLLVEDEPINQEIAREMLKDVGLCVDTADDGRE 640
Query: 62 AVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQ 119
AV L + ++ +DM+MP MDG+EAT+ +R ++ IV +T+ +RE ++
Sbjct: 641 AVRL-SAERDYALILMDMQMPNMDGLEATRCIRQTPRGARIPIVAMTANVFAEDREHCLE 699
Query: 120 AGLDLCYTKPL 130
AG+D KP+
Sbjct: 700 AGMDDFLAKPV 710
>gi|256829549|ref|YP_003158277.1| histidine kinase [Desulfomicrobium baculatum DSM 4028]
gi|256578725|gb|ACU89861.1| histidine kinase [Desulfomicrobium baculatum DSM 4028]
Length = 742
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+DD + R IL G +V A NG EAV++ + +VF+D++MPVMDG+EA
Sbjct: 628 LLVEDDSVNRMAMERILGKFGCEVISAGNGLEAVEILKR-ENVDLVFMDVQMPVMDGMEA 686
Query: 90 TKAMR-AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
T+ +R + ++ IV +T+ +RE F+Q G+D +KP+ MA++
Sbjct: 687 TRIIREELGLDVPIVAMTAYAMAGDRERFLQGGMDSYVSKPVDMARL 733
>gi|345876839|ref|ZP_08828601.1| phosphoenolpyruvate synthase [endosymbiont of Riftia pachyptila (vent
Ph05)]
gi|344226132|gb|EGV52473.1| phosphoenolpyruvate synthase [endosymbiont of Riftia pachyptila (vent
Ph05)]
Length = 1426
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 70/117 (59%), Gaps = 10/117 (8%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + R + +L G V+ AENG+EAV + R A + +V +D++MP MDG EA
Sbjct: 1050 LLVEDNAINREVAMELLSGAGLAVDTAENGREAVTMVRATA-YDLVLMDIQMPEMDGREA 1108
Query: 90 TKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL-------TMAKIVP 137
T+ +R+M K I+ +T+ E +R+ ++AG++ KP+ T+AK +P
Sbjct: 1109 TRVIRSMASKAALPILAMTANVFEEDRQACLEAGMNDFIAKPVDPESLFSTIAKWLP 1165
>gi|85708049|ref|ZP_01039115.1| probable sensor/response hybrid [Erythrobacter sp. NAP1]
gi|85689583|gb|EAQ29586.1| probable sensor/response hybrid [Erythrobacter sp. NAP1]
Length = 551
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/104 (36%), Positives = 62/104 (59%), Gaps = 4/104 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D R + +L S+G + V NG EA++ R A F +V +D+ MP+MDG +A
Sbjct: 313 LLAEDTESNRYVIERLLGSIGCETAVVTNGVEAIEAMRN-ATFDLVLMDVMMPIMDGEQA 371
Query: 90 TKAMRAM---KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+A+R M + I+GVT+ + + ERE + AG+ C +KP+
Sbjct: 372 TQAIRNMPGAPSRTPIIGVTAHSLQAERERLLSAGMTACLSKPV 415
>gi|89242035|dbj|BAE80688.1| histidine kinase [Zea mays]
Length = 995
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 54/84 (64%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+ + R+ + LK G KVE E+GK+A+ + KFH+ +D++MP MDG EA
Sbjct: 853 LVVDDNKVNLRVAAGTLKKFGAKVECVESGKDALASLQVPHKFHLCLMDIQMPEMDGFEA 912
Query: 90 TKAMRAMKVESKIVGVTSRNSETE 113
TK +RAM+ ++ V +S+T+
Sbjct: 913 TKQIRAMEAKANEQAVACDDSDTD 936
>gi|406934281|gb|EKD68627.1| hypothetical protein ACD_47C00511G0002 [uncultured bacterium]
Length = 811
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D P + + ++K +G + V ENG AV+ R+ KF ++F+D++MP MDGIEA
Sbjct: 694 LLAEDSPANIALMAKLMKILGHDITVVENGLRAVEAARS-QKFDLIFMDVQMPEMDGIEA 752
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
T+ +R +E+ IV +T+ + + + + AG+D +KP+ + +I L+++ ++
Sbjct: 753 TRKIRESGIETPIVAITAAALKDDIDSCLSAGMDAYTSKPINVVEIQELIKKYAED 808
>gi|430748143|ref|YP_007207272.1| PAS domain-containing protein [Singulisphaera acidiphila DSM 18658]
gi|430019863|gb|AGA31577.1| PAS domain S-box [Singulisphaera acidiphila DSM 18658]
Length = 1519
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 71/117 (60%), Gaps = 5/117 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ + +R+ +LK G +V V NG+EA+ G++F V +D++MP MDG EA
Sbjct: 1274 LLAEDNAINQRLAMALLKKQGHQVVVVNNGREALAAM-NGSRFDAVLMDVQMPEMDGFEA 1332
Query: 90 TKAMRAMK----VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T A+R+ + V + I+ +T+ + +R+ + AG+D +KPL + ++ +LE L
Sbjct: 1333 TAAIRSREAGTGVHTTIIAMTAHALKGDRDRCLDAGMDAYVSKPLRLEDLLGVLEGL 1389
Score = 40.4 bits (93), Expect = 0.26, Method: Composition-based stats.
Identities = 32/131 (24%), Positives = 57/131 (43%), Gaps = 14/131 (10%)
Query: 20 PVSKNRPYF--------ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR---- 67
PV++ RP L+VDD+ RRI +L + G K G+EA+
Sbjct: 1104 PVARARPVEPEQVHGLPVLIVDDNATNRRILEEMLTNWGMKPTTVAGGREAIATLAEARG 1163
Query: 68 TGAKFHIVFIDMEMPVMDGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLC 125
G F +V +D MP MDG + ++ + S ++ ++S N + + G+
Sbjct: 1164 AGRPFALVLLDAMMPGMDGFTLAEQIKQDSALTGSTLMMLSSANRREDAARCQELGVATY 1223
Query: 126 YTKPLTMAKIV 136
KP+ + ++
Sbjct: 1224 LMKPIRESSLL 1234
>gi|353241632|emb|CCA73434.1| probable nik-1 protein (Os-1p protein) [Piriformospora indica DSM
11827]
Length = 1417
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/128 (33%), Positives = 74/128 (57%), Gaps = 11/128 (8%)
Query: 20 PVSKNRPYFALVVDDDPMI-RRIHSMILKSVGFKVEVAENGKEAVDLF-----RTGAKFH 73
PV+ F +++ +D ++ +R+ IL+ G VE+AENG A++ F R G +F
Sbjct: 1275 PVTSTDTSFDILLAEDNLVNQRLAVRILEKYGHTVEIAENGSVALNKFKERWQRAGNRFD 1334
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTK 128
++ +D+ MP M G+EAT+ +RA + E + I+ +T+ +RE +QAG+D TK
Sbjct: 1335 VILMDVSMPFMGGMEATELIRAYEAEHHLERTPIIALTAHAMIGDRERCLQAGMDDHITK 1394
Query: 129 PLTMAKIV 136
PL A ++
Sbjct: 1395 PLRRADLL 1402
>gi|385788866|ref|YP_005819975.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Erwinia sp. Ejp617]
gi|310768138|gb|ADP13088.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Erwinia sp. Ejp617]
Length = 992
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N LVVDD P+ R + S L S+G++V+ A++G +A+++ + IV D+ MP
Sbjct: 863 NDDILILVVDDHPINRMLLSDQLGSLGYRVKTAQDGIDALNVIGRN-EIDIVLTDVNMPN 921
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + ++GVT+ E++ ++AG+D C +KP+TM
Sbjct: 922 MDGYRLTQRLRELGQTFPVIGVTANALAEEKQRCIEAGMDNCLSKPVTM 970
>gi|427400663|ref|ZP_18891901.1| hypothetical protein HMPREF9710_01497 [Massilia timonae CCUG 45783]
gi|425720176|gb|EKU83099.1| hypothetical protein HMPREF9710_01497 [Massilia timonae CCUG 45783]
Length = 1756
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/117 (33%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
+VVDD +RR+ +L+ G++V++A++G EA++L GA ++ +D+EMP MDG +
Sbjct: 1640 MVVDDSLTVRRVTQRLLEREGYRVQLAKDGVEALELIGQGAP-DLMLVDIEMPRMDGFDL 1698
Query: 90 TKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
T+ +R + I+ +TSR ++ R V + G++ Y KP ++ +EEL K
Sbjct: 1699 TRNVRGNEATKDIPIIMITSRTADKHRNVALGLGVNAYYGKPYQEPVLLAAIEELLK 1755
>gi|374584810|ref|ZP_09657902.1| multi-sensor hybrid histidine kinase [Leptonema illini DSM 21528]
gi|373873671|gb|EHQ05665.1| multi-sensor hybrid histidine kinase [Leptonema illini DSM 21528]
Length = 793
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
AL+V+DDP+ R I LKS+GF+V+ A +G EA+D + +V +D+ MPVMDG
Sbjct: 675 ALIVEDDPLNREILRRQLKSMGFEVDEATDGSEALDRLEQ-TDYAVVLMDVHMPVMDGYT 733
Query: 89 ATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
AT A+R + +S I+ +T+ + +RE ++ G+D KP +++ +L
Sbjct: 734 ATIAIRNREAQSGGHRCIIALTADAMKGDRERCLEVGMDDYLAKPFRPSELKEVL 788
>gi|239908525|ref|YP_002955267.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
gi|239798392|dbj|BAH77381.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
Length = 669
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 72/119 (60%), Gaps = 5/119 (4%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGF-KVEVAENGKEAVDLFRTG----AKFHIVFIDMEMPV 83
ALV +D+P R + IL+ +G + + A +G+EAV L A +H+VF+D+ MP+
Sbjct: 542 ALVAEDNPYNRFLLQKILQKLGVGQADFASDGQEAVRLVLAARDADAPYHVVFMDVRMPI 601
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
+DG+EA++ +R V + I+ +T++ +E + QAG++ ++KP + + +L E+
Sbjct: 602 LDGLEASRRLREHGVTTPIIALTAQATEDDDAQCRQAGMNAYFSKPYRINDLEAVLAEI 660
>gi|87310159|ref|ZP_01092291.1| sensory box sensor histidine kinase/response regulator
[Blastopirellula marina DSM 3645]
gi|87287149|gb|EAQ79051.1| sensory box sensor histidine kinase/response regulator
[Blastopirellula marina DSM 3645]
Length = 845
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 61/108 (56%), Gaps = 1/108 (0%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVVDD RR S++L+ G + +AENG+EAVD I+ +DM+MPVMDG
Sbjct: 716 ALVVDDGEANRRFISVVLEHAGANITMAENGQEAVDSIAEHTS-DIILLDMQMPVMDGYV 774
Query: 89 ATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
A + +R I+ VT+ + +RE + AG +KPL+ +++
Sbjct: 775 AAELIRFQGFTGPIIAVTAHAMQGDREKCLAAGCSGYLSKPLSREELL 822
>gi|449135922|ref|ZP_21771348.1| two-component hybrid sensor and regulator [Rhodopirellula europaea
6C]
gi|448885364|gb|EMB15809.1| two-component hybrid sensor and regulator [Rhodopirellula europaea
6C]
Length = 801
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKE----AVDLFRTGAKFHIVFIDMEMPVMD 85
LVVDD +R I L+ G KV+ AE+G++ AV +G + ++ +DM+MPV+D
Sbjct: 653 LVVDDRRDVRHISQHFLEKAGAKVDTAEDGQQGMDAAVQARDSGHPYDLIVMDMQMPVVD 712
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G++AT +R+ ++ I+ +T+ + +R+ + G D +KP+ K+V ++
Sbjct: 713 GLQATALLRSAGIDWPIIALTADAMKGDRDRCLNGGCDDYLSKPIDHVKLVSMV 766
>gi|417335039|ref|ZP_12118026.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
gi|353572859|gb|EHC36379.1| sensor protein RcsC [Salmonella enterica subsp. enterica serovar
Alachua str. R6-377]
Length = 503
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 67/116 (57%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A+++ A IV
Sbjct: 370 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSKNA-IDIVL 428
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 429 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 484
>gi|322702847|gb|EFY94470.1| putative histidine kinase M232p [Metarhizium anisopliae ARSEF 23]
Length = 1423
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/104 (39%), Positives = 62/104 (59%), Gaps = 6/104 (5%)
Query: 21 VSKNRPYFA-LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFID 78
+ N+P + L+VDD+P+ +I +K + A NG++AVDLFR G + VF+D
Sbjct: 1025 IDSNQPGTSFLLVDDNPINLKILITYMKKLRLPYRTATNGQQAVDLFREGNGLYKCVFMD 1084
Query: 79 MEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
+ MPVMDG EAT+ +R+ ++E VG N RE+ M+ GL
Sbjct: 1085 ISMPVMDGFEATRHIRSTEMEKDFVGEIRGN----RELSMRWGL 1124
>gi|39996771|ref|NP_952722.1| response receiver-modulated diguanylate cyclase [Geobacter
sulfurreducens PCA]
gi|409912191|ref|YP_006890656.1| response receiver-modulated diguanylate cyclase [Geobacter
sulfurreducens KN400]
gi|39983659|gb|AAR35049.1| response receiver-modulated diguanylate cyclase [Geobacter
sulfurreducens PCA]
gi|298505784|gb|ADI84507.1| response receiver-modulated diguanylate cyclase [Geobacter
sulfurreducens KN400]
Length = 322
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 71/120 (59%), Gaps = 6/120 (5%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P+ L+VDD+ ++R + LKS G+ V +AENGKEA+++F G + IV D MP MD
Sbjct: 15 PFPILIVDDNRLLRTMLETSLKSAGYDVVMAENGKEALEIFNKG-YYPIVMTDWVMPEMD 73
Query: 86 GIEATKAMRA--MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
G+E +A+RA + I+ +TS++S+ + ++AG D KP A V LL L+
Sbjct: 74 GLELCRAIRADCSGRYTYIILLTSQDSKNDVIAGLEAGADEYLVKP---AHQVELLTRLK 130
>gi|398397689|ref|XP_003852302.1| histidine kinase M3YPp [Zymoseptoria tritici IPO323]
gi|339472183|gb|EGP87278.1| histidine kinase M3YPp [Zymoseptoria tritici IPO323]
Length = 968
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 14/131 (10%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT------- 68
I+ N S+ R L+V+D+ + +++ + L+S G V VA +G+EA+D RT
Sbjct: 822 IASNSDSETRRRVVLLVEDNLVNQKVMAKQLRSAGHDVTVANHGQEALDHIRTTHFCVPN 881
Query: 69 -GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVG------VTSRNSETEREVFMQAG 121
G + +V +D+EMP+M G+E T +R M+++ +I G VT+ +++ M G
Sbjct: 882 GGVELDVVLMDIEMPIMGGLECTSRIREMEMKGEIQGRVSLIAVTANARAEQQKQAMDVG 941
Query: 122 LDLCYTKPLTM 132
D TKP M
Sbjct: 942 FDAVITKPFKM 952
>gi|291571152|dbj|BAI93424.1| two-component hybrid sensor and regulator [Arthrospira platensis
NIES-39]
Length = 917
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 21 VSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
++ N+P Y LVVDD R++ L +GF+V+ AENG+EA+ ++ H++++DM
Sbjct: 702 LAPNQPKYRILVVDDRESNRQLLVKFLSPLGFEVQEAENGQEAIAIWNQWEP-HLIWMDM 760
Query: 80 EMPVMDGIEATKAMRA-MKVESK-IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
MPVMDG EAT +++ +K ++ I+ +T+ E ER V + AG D KP
Sbjct: 761 RMPVMDGYEATTQIKSYLKGQATVIIALTASAFEEERAVVLSAGCDDFVRKPF 813
>gi|283782276|ref|YP_003373031.1| PAS/PAC sensor hybrid histidine kinase [Pirellula staleyi DSM 6068]
gi|283440729|gb|ADB19171.1| PAS/PAC sensor hybrid histidine kinase [Pirellula staleyi DSM 6068]
Length = 675
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/136 (34%), Positives = 71/136 (52%), Gaps = 10/136 (7%)
Query: 13 KARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT---- 68
+ +IS P R LV DD +R+ IL G V VAENG EAV ++
Sbjct: 523 RPQISAGPQLTGR---ILVADDGIDNQRLLRQILTRAGADVTVAENGLEAVRAWQAANLA 579
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTK 128
G F ++ +DM+MP +DG +AT+ +R + I+ +T+ +R++ +QAG D TK
Sbjct: 580 GCPFALILMDMQMPELDGYQATRRLRELGATIPIIALTAHAMTGDRDLCLQAGCDDYLTK 639
Query: 129 PLTMAKIVPLLEELQK 144
P + LLE L+K
Sbjct: 640 PFERKR---LLETLRK 652
>gi|409993964|ref|ZP_11277088.1| two-component hybrid sensor and regulator histidine kinase
[Arthrospira platensis str. Paraca]
gi|409935180|gb|EKN76720.1| two-component hybrid sensor and regulator histidine kinase
[Arthrospira platensis str. Paraca]
Length = 917
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/113 (38%), Positives = 69/113 (61%), Gaps = 4/113 (3%)
Query: 21 VSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
++ N+P Y LVVDD R++ L +GF+V+ AENG+EA+ ++ H++++DM
Sbjct: 702 LAPNQPKYRILVVDDRESNRQLLVKFLSPLGFEVQEAENGQEAIAIWNQWEP-HLIWMDM 760
Query: 80 EMPVMDGIEATKAMRA-MKVESK-IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
MPVMDG EAT +++ +K ++ I+ +T+ E ER V + AG D KP
Sbjct: 761 RMPVMDGYEATTQIKSYLKGQATVIIALTASAFEEERAVVLSAGCDDFVRKPF 813
>gi|334138589|ref|ZP_08512005.1| PAS domain S-box protein [Paenibacillus sp. HGF7]
gi|333603872|gb|EGL15270.1| PAS domain S-box protein [Paenibacillus sp. HGF7]
Length = 1038
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 72/117 (61%), Gaps = 4/117 (3%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
S+ P LVV+D P+ R++ L+ +G+ ++AENG EAV+ T ++ +VF+D++M
Sbjct: 905 SRPAPLKILVVEDHPVNRQLFIKFLEKLGYGADIAENGMEAVEAV-TSTEYDLVFMDLQM 963
Query: 82 PVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
PVMDG++AT+ +R + + I+ VT+ ++E +++G+ +KP+ ++
Sbjct: 964 PVMDGLQATRLIRQLLPSGQNPVIIAVTASVRPADKEKCLESGMQDFISKPILFDEV 1020
>gi|239905424|ref|YP_002952163.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
gi|239795288|dbj|BAH74277.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
Length = 904
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/120 (34%), Positives = 67/120 (55%), Gaps = 10/120 (8%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-----RTGAKFHIVFIDMEM 81
+ LVV+DD M R +L +GF V A NG+EA+D + ++ +D++M
Sbjct: 767 HVVLVVEDDDMNRMAAQRMLVKLGFTVHTACNGQEALDFLAGQTPQAQPSVDLILMDIQM 826
Query: 82 PVMDGIEATKAMRA-----MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
PVMDG+EAT+ +R + I+ +T+ +RE F+QAGLD KP+ +A+++
Sbjct: 827 PVMDGLEATRRIRENADGRFDPLTPIIALTAYAMAGDRERFLQAGLDDHLAKPVKVAEML 886
>gi|114566147|ref|YP_753301.1| signal transduction histidine kinase-like protein [Syntrophomonas
wolfei subsp. wolfei str. Goettingen]
gi|114337082|gb|ABI67930.1| multi-sensor hybrid histidine kinase [Syntrophomonas wolfei subsp.
wolfei str. Goettingen]
Length = 1442
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 78/138 (56%), Gaps = 6/138 (4%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
G S + I ENP+ RP F L+V+D+ M ++I +L+ G ++A +G EA+
Sbjct: 1193 GDSIVTRYTIKENPIPA-RPRF-LLVEDNEMNQKIIVKMLEKRGMYCDLACSGAEALKAL 1250
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLD 123
+ + IVF+D +MP MDG E T +R M+ E + IV +T+ E +RE +QAG+D
Sbjct: 1251 QQ-KDYDIVFMDCQMPEMDGYETTARIRQMEGEERHTIIVAMTANAMEGDREKCLQAGMD 1309
Query: 124 LCYTKPLTMAKIVPLLEE 141
+KP+ + ++E+
Sbjct: 1310 DYISKPVDFQLLFNIIEQ 1327
Score = 38.9 bits (89), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 40/70 (57%), Gaps = 3/70 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA---KFHIVFIDMEMPVMDG 86
L+VDD+ R+I L+ VE +++ ++A+ + + + F +V +D +MP M+G
Sbjct: 1066 LIVDDNSSNRKIIRTYLEDAQCLVEESDSAEKAITILLSASAVKSFDVVIVDFQMPAMNG 1125
Query: 87 IEATKAMRAM 96
E A++A+
Sbjct: 1126 HELAAALKAI 1135
>gi|445499004|ref|ZP_21465859.1| multi-sensor hybrid histidine kinase [Janthinobacterium sp. HH01]
gi|444788999|gb|ELX10547.1| multi-sensor hybrid histidine kinase [Janthinobacterium sp. HH01]
Length = 1210
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/103 (35%), Positives = 66/103 (64%), Gaps = 3/103 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ + +++ + +L G VE+A NG EAV + + ++ IV +DM+MPVMDG+EA
Sbjct: 864 LLAEDNELNQQVAAELLADAGLVVEIANNGAEAVAMAQR-EQYDIVLMDMQMPVMDGVEA 922
Query: 90 TKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+A+RA+ +V +T+ + +RE+ +QAG+ KP+
Sbjct: 923 TRALRALPALDGLPVVAMTANAMQADRELCIQAGMVDFVIKPI 965
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 44/135 (32%), Positives = 72/135 (53%), Gaps = 6/135 (4%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT----G 69
AR S P R LVVDD+ R + + +L+ + F V VA +G EA+D+ R G
Sbjct: 699 ARPSLLPSPDLRGKRLLVVDDNDSARSVLAELLRGMRFDVRVASSGAEALDMVRDAAVGG 758
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYT 127
H+V +D +MPVM GI+ A+RA+ ++ +++ VT+ E ++ AG+D
Sbjct: 759 EPLHVVLLDWQMPVMSGIDTAAAIRALALQEPPRMMMVTAYGREEVQQQAHNAGIDDVLI 818
Query: 128 KPLTMAKIVPLLEEL 142
KP+ + ++ L L
Sbjct: 819 KPVNASVLLNTLIRL 833
>gi|406678409|ref|ZP_11085585.1| hypothetical protein HMPREF1170_03793 [Aeromonas veronii AMC35]
gi|404622490|gb|EKB19353.1| hypothetical protein HMPREF1170_03793 [Aeromonas veronii AMC35]
Length = 905
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/138 (31%), Positives = 78/138 (56%), Gaps = 4/138 (2%)
Query: 8 ASSSKKARISENPVSKN-RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
+ S + ++ P + +P L VDD+ ++ + +LK + +V V +NGKEAV
Sbjct: 645 SPESSRQKLPALPAPRQLQPIKVLAVDDNAANLKLIAAMLKEMVSQVVVCKNGKEAVKQA 704
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDL 124
++ F I+F+D++MP+MDGI AT+A+R ++ + IV VT+ ERE ++ G+D
Sbjct: 705 QS-QPFDIIFMDIQMPIMDGISATQAIRNQSLNTTTPIVAVTAHAIPGERERLIRQGMDD 763
Query: 125 CYTKPLTMAKIVPLLEEL 142
KP+ + + L+ +
Sbjct: 764 YLAKPIDESMLAQLITDF 781
>gi|283796048|ref|ZP_06345201.1| PAS domain protein [Clostridium sp. M62/1]
gi|291076258|gb|EFE13622.1| response regulator receiver domain protein [Clostridium sp. M62/1]
Length = 889
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 70/121 (57%), Gaps = 6/121 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG--AKFHIVFIDMEMPVMDGI 87
LVV+D+ + R I + S G +VE A NGKEAV+ F T F ++ +D++MPVMDG
Sbjct: 764 LVVEDNDLNREIAVTLFSSFGAEVETAVNGKEAVEAFETSEPGFFDLILMDVQMPVMDGY 823
Query: 88 EATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
EAT+ +R++ E I+ +T+ ++ M G+D +KP+ + ++V +E +
Sbjct: 824 EATRIIRSLDREDGREIPILAMTANAFSEDKAKSMACGMDGHISKPIDLKEVVEKIERVL 883
Query: 144 K 144
K
Sbjct: 884 K 884
>gi|295094189|emb|CBK83280.1| Signal transduction histidine kinase [Coprococcus sp. ART55/1]
Length = 581
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
A S N SK R LV +D+P+ +++ +L GF ++AENG++AV+LF+T +
Sbjct: 449 AVFSINAHSKAR---ILVAEDEPVNQQVIGKLLGMAGFSYDIAENGQKAVELFKTKI-YD 504
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTK 128
D++MPVMDGI AT+ +R ++ + K I+ VT+R ++E ++ LD K
Sbjct: 505 AALFDVQMPVMDGIAATQEIREIERKEKRKRLPIIAVTARAMFGDKERILENQLDDYIAK 564
Query: 129 PLTMAKIVPLL 139
P + +V L
Sbjct: 565 PYNLNDVVDTL 575
>gi|196228263|ref|ZP_03127130.1| integral membrane sensor hybrid histidine kinase [Chthoniobacter
flavus Ellin428]
gi|196227666|gb|EDY22169.1| integral membrane sensor hybrid histidine kinase [Chthoniobacter
flavus Ellin428]
Length = 1079
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/134 (33%), Positives = 74/134 (55%), Gaps = 5/134 (3%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
G SS ++ + E V + RP L+ +D+ + +R+ + L+S G V VA NG+EAV+LF
Sbjct: 772 GRSSRRREKPVETDVPRQRPLRILLAEDNAVNQRLAVVNLESWGHTVTVAHNGREAVELF 831
Query: 67 RTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGL 122
T F ++ +D +MP M G EAT +R + S IV +T+ + RE + AG+
Sbjct: 832 -TAQPFDLILMDSQMPRMGGFEATAEIRRREAGSGAHVPIVAMTANVMKGSREECLGAGM 890
Query: 123 DLCYTKPLTMAKIV 136
D KP+ +++
Sbjct: 891 DGYVAKPMRRHELI 904
>gi|408379903|ref|ZP_11177494.1| two component sensor kinase/response regulator hybrid
[Agrobacterium albertimagni AOL15]
gi|407746280|gb|EKF57805.1| two component sensor kinase/response regulator hybrid
[Agrobacterium albertimagni AOL15]
Length = 751
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 69/109 (63%), Gaps = 4/109 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ + + + + L +G VE+A +G EAV + R A F ++ +DM+MPVMDGIEA
Sbjct: 495 LLVEDNKVNQIVATRFLARLGQDVEIANDGAEAVSISREQA-FDLILMDMQMPVMDGIEA 553
Query: 90 TK---AMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
TK A R ++ I+ +T+ S+ +R ++AG+ +KP+T+ ++
Sbjct: 554 TKRIIAERGPSADAPIIAMTANASDDDRRRCLEAGMQGFESKPVTLERL 602
>gi|347733385|ref|ZP_08866445.1| sensory box protein [Desulfovibrio sp. A2]
gi|347517841|gb|EGY25026.1| sensory box protein [Desulfovibrio sp. A2]
Length = 1103
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/134 (32%), Positives = 73/134 (54%), Gaps = 12/134 (8%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
AEGA + + P L+V+DD + + +L+ G V +A +G++A+D
Sbjct: 959 AEGAGDA------DAPAETPTELHVLLVEDDAVNQLAVQRMLEKSGMTVTLATDGQQALD 1012
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMR-----AMKVESKIVGVTSRNSETEREVFMQ 119
R AKF V +D++MPVMDG+ AT+A+R A + +V +T+ +RE F++
Sbjct: 1013 ALRR-AKFDCVVMDVQMPVMDGLAATRAIRTDPAFAARAAIPVVAMTAHAMVGDRETFLE 1071
Query: 120 AGLDLCYTKPLTMA 133
AG+D +KP+ M
Sbjct: 1072 AGMDDYVSKPVEMG 1085
>gi|251794485|ref|YP_003009216.1| multi-sensor hybrid histidine kinase [Paenibacillus sp. JDR-2]
gi|247542111|gb|ACS99129.1| multi-sensor hybrid histidine kinase [Paenibacillus sp. JDR-2]
Length = 1267
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 79/142 (55%), Gaps = 6/142 (4%)
Query: 6 EGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
E ++++A +S P K R L+ +D+ + + + +LK GF+V +AENG+E +D
Sbjct: 991 EWTMAAQEAAVSAEPQEKIR---VLLAEDNHINQLVAIELLKERGFEVGLAENGREVLDK 1047
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLD 123
G +H+V +D+ MP MDG+EAT +R + I+ VT+ + + E ++Q G++
Sbjct: 1048 LEQG-DWHLVLMDIHMPEMDGMEATTIIRNDPRYEQLPIIAVTANSLRADHEHYLQLGMN 1106
Query: 124 LCYTKPLTMAKIVPLLEELQKN 145
TKPL ++ ++ L N
Sbjct: 1107 GVVTKPLDPDQLCMVIMNLLNN 1128
>gi|431930089|ref|YP_007243135.1| signal transduction histidine kinase [Thioflavicoccus mobilis 8321]
gi|431828392|gb|AGA89505.1| signal transduction histidine kinase [Thioflavicoccus mobilis 8321]
Length = 697
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 12/146 (8%)
Query: 5 AEGASSSKKARISENPVSK--NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
A+ A+++ K PV++ P LV +D+ + ++ L +GF V + E+G+EA
Sbjct: 551 AQNATATTKVSPRPAPVTRPDAEPIRILVAEDNAIAAKVIQTFLDRLGFSVVLVEDGEEA 610
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQA 120
+D R + F I FID+ MP +DGI T+A RA + + IV +T+ +E + ++A
Sbjct: 611 LDAAR-ASDFDIAFIDLRMPKLDGIAFTRAYRADERDGHLPIVALTANAAEDTKTACLEA 669
Query: 121 GLDLCYTKPL-------TMAKIVPLL 139
G+D +KP+ +A+ VP++
Sbjct: 670 GMDDFLSKPVKAEALRQVVARFVPVI 695
>gi|392403459|ref|YP_006440071.1| integral membrane sensor hybrid histidine kinase [Turneriella parva
DSM 21527]
gi|390611413|gb|AFM12565.1| integral membrane sensor hybrid histidine kinase [Turneriella parva
DSM 21527]
Length = 832
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/108 (37%), Positives = 66/108 (61%), Gaps = 3/108 (2%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L V+DD + + + + L+S+G+++ +AENG+EAV L F ++F+D++MP M
Sbjct: 707 PLRILAVEDDAVNQVVITETLRSLGYEISLAENGREAVALAENKI-FDLIFMDVQMPEMS 765
Query: 86 GIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
GIEAT+ +RA+ + IV +T+ +S R AG+D TKP +
Sbjct: 766 GIEATERIRALTDGDRVAIVALTADSSAENRHKCFAAGIDDFLTKPFS 813
>gi|218441977|ref|YP_002380306.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7424]
gi|218174705|gb|ACK73438.1| multi-sensor hybrid histidine kinase [Cyanothece sp. PCC 7424]
Length = 1058
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/111 (36%), Positives = 67/111 (60%), Gaps = 3/111 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVVDD R++ +L SVGF V+ A NG+EA++++ + H++++DM MP+MDG
Sbjct: 852 YKILVVDDKQTNRQLLIKLLTSVGFTVKEACNGQEAIEIWESWQP-HLIWMDMRMPIMDG 910
Query: 87 IEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
EATK ++++ + I+ +T+ E E+ V + AG D KP + I
Sbjct: 911 YEATKFIKSIPKGKNTVIIAITASVLEEEKAVVLSAGCDDFVRKPFLESTI 961
>gi|410465886|ref|ZP_11319059.1| signal transduction histidine kinase [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981092|gb|EKO37713.1| signal transduction histidine kinase [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 807
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/114 (34%), Positives = 75/114 (65%), Gaps = 3/114 (2%)
Query: 28 FALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGI 87
L+V+D+ + +++ L+++G V+VA NG+EAV++ R+ + + +V +D++MPVMDG+
Sbjct: 314 LVLLVEDNAINQQVARETLETLGAAVDVAINGREAVEMVRS-SLYDVVLMDVQMPVMDGL 372
Query: 88 EATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
AT+A+R + E IV +T+ +RE ++AG++ TKPL + +++ L
Sbjct: 373 AATRAIRQLSSTAELPIVALTAHALAEDRERCLEAGMNDYLTKPLEVDRLLASL 426
Score = 62.8 bits (151), Expect = 4e-08, Method: Composition-based stats.
Identities = 45/126 (35%), Positives = 66/126 (52%), Gaps = 13/126 (10%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV-DLF---RTGAKFHIVFIDMEMPVMD 85
L+VDD + R I S IL+S G +V AENGKEA LF G F ++ +D+EMP MD
Sbjct: 588 LLVDDAKLNRAIFSQILRSGGHEVVTAENGKEACRRLFGEKPDGRPFDLILMDIEMPEMD 647
Query: 86 GIEATKAMRAMKVES---------KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
G A + +R + S IV +TS + + E+ AG+D C K +++
Sbjct: 648 GPTAARTIRRLLGASVSPPCAPGVPIVALTSHDCKNEQARCQDAGMDACLHKVFEQGELL 707
Query: 137 PLLEEL 142
+L+ L
Sbjct: 708 AILQGL 713
>gi|449144060|ref|ZP_21774878.1| Signal transduction histidine kinase [Vibrio mimicus CAIM 602]
gi|449080384|gb|EMB51300.1| Signal transduction histidine kinase [Vibrio mimicus CAIM 602]
Length = 574
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/131 (27%), Positives = 77/131 (58%), Gaps = 3/131 (2%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-RTGAKFHI 74
+ ++ ++KN + LVV+D + + ++L +G+ V +AENG EA++L + F +
Sbjct: 443 LQQSTIAKN--HHILVVEDTKTNQMVIQLLLNKMGYDVTIAENGLEAIELLEKNNNAFDL 500
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
V +D+ MP+MDGI AT+ +R+ ++ I+ +T+ + ++++ + AG++ KP+
Sbjct: 501 VLMDISMPIMDGIMATRKIRSQDIDIPIIALTAHTAGSDKQNCIDAGMNDIVLKPIRSKD 560
Query: 135 IVPLLEELQKN 145
I+ ++ N
Sbjct: 561 IMNVVNRFLPN 571
>gi|427739079|ref|YP_007058623.1| PAS domain-containing protein [Rivularia sp. PCC 7116]
gi|427374120|gb|AFY58076.1| PAS domain S-box [Rivularia sp. PCC 7116]
Length = 1358
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/117 (34%), Positives = 68/117 (58%), Gaps = 4/117 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D R I +L+ +G++ E NG++A+D + F IVF+D +MPVMDG EA
Sbjct: 1243 LIVEDYVDSREIVVFMLEELGYQAEAVSNGEQALDKL-AESDFDIVFMDCQMPVMDGYEA 1301
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
T+ +R + E + I+G+T+ +RE + AG+D +KP+ M + ++ Q
Sbjct: 1302 TRQLRQREGEQRHTLIIGLTANAMYDDREKCLNAGMDNYLSKPVMMENLERIINNYQ 1358
>gi|402759579|ref|ZP_10861835.1| hybrid sensory histidine kinase in two-component regulatory system
with EvgA, regulates multidrug resistance [Acinetobacter
sp. NCTC 7422]
Length = 1175
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/119 (36%), Positives = 64/119 (53%), Gaps = 2/119 (1%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
+P L VDD P R + L +G V AENG++A+ L+R F +V D MPVM
Sbjct: 927 QPLSILAVDDHPANRLLLKSQLTRLGHFVMEAENGEQALKLWRK-HDFDLVITDCNMPVM 985
Query: 85 DGIEATKAMRAMKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
DGI T+ +R I G+T+ ER ++ AG+D C KPL +A++ LL ++
Sbjct: 986 DGITLTQLLRQEVTRPVTIFGLTANAQAEERARYLAAGMDDCLFKPLQLAQLETLLNKV 1044
>gi|358635214|dbj|BAL22511.1| response regulator receiver protein [Azoarcus sp. KH32C]
Length = 730
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR-TGAKFHIVFIDMEMPVMDGIE 88
L+ +D P+ + + +L+ VG V +A NGKEA+DL R T +F V +D++MPVMDG E
Sbjct: 470 LLAEDHPLNQMVARALLEDVGCVVTIAGNGKEALDLLRDTKLRFDCVLMDVQMPVMDGYE 529
Query: 89 ATKAMRAMKV--ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
AT+ +RA + +V +T+ + + + AG+D TKP+ AK+
Sbjct: 530 ATRQIRADASLDDVFVVAMTANATREDHMSCVDAGMDDFLTKPVDPAKL 578
>gi|434388441|ref|YP_007099052.1| chemotaxis protein histidine kinase-like protein [Chamaesiphon
minutus PCC 6605]
gi|428019431|gb|AFY95525.1| chemotaxis protein histidine kinase-like protein [Chamaesiphon
minutus PCC 6605]
Length = 1734
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P + R L+VDD +R + S+ K G++VE A +G+EA D R G IVF D+
Sbjct: 1601 PTVETRESMVLIVDDSITVRELLSLTFKRAGYRVEQARDGQEAWDKLRAGLPCDIVFCDI 1660
Query: 80 EMPVMDGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKP 129
EMP MDG+E ++ K + +TSR S+ R++ Q G + KP
Sbjct: 1661 EMPRMDGLEFLSRIQKDNALKKVPVAMLTSRGSDRHRQIASQLGASGYFIKP 1712
>gi|392559335|gb|EIW52519.1| histidine kinase [Trametes versicolor FP-101664 SS1]
Length = 1164
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 13/124 (10%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK---- 71
++EN V PY L+ +D+ + +++ IL+ G +VE+AENG+ AVD F+ +
Sbjct: 1004 VAENDV----PYDILIAEDNLVNQKLAVKILEKYGHQVEIAENGQLAVDAFKARVQRNRP 1059
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCY 126
F ++ +D+ MP M G+EAT+ +R + + I+ +T+ +RE +QAG+D
Sbjct: 1060 FDVILMDVSMPFMGGMEATELIRTYEQTHGLEPTPIIALTAHAMIGDRERCLQAGMDDHI 1119
Query: 127 TKPL 130
TKPL
Sbjct: 1120 TKPL 1123
>gi|411008542|ref|ZP_11384871.1| virulence sensor protein BvgS [Aeromonas aquariorum AAK1]
Length = 1084
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/129 (34%), Positives = 71/129 (55%), Gaps = 2/129 (1%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
S PV+ R LVVDD+ + + LK +G +V V NG EA+ ++ F +V
Sbjct: 950 SPRPVAATR-LRVLVVDDNHANQVLLRQQLKHLGHEVCVRGNGAEALQASQS-QDFDLVI 1007
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
D +MP+MDG E T+ +RA I G T+ + ERE+ + AG+D C KP+ +A++
Sbjct: 1008 TDCQMPLMDGFELTRRLRARGHTLPIWGFTAHATARERELCLAAGMDDCLYKPIGLARLR 1067
Query: 137 PLLEELQKN 145
L L+++
Sbjct: 1068 TALASLEQS 1076
>gi|388852348|emb|CCF53963.1| related to SSK1-two-component signal transducer [Ustilago hordei]
Length = 1722
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/104 (36%), Positives = 69/104 (66%), Gaps = 4/104 (3%)
Query: 2 MIGAEGASSSKKAR-ISENPVSKN--RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAEN 58
M+G ASS+++ R + P+ + P L+V+D+P+ +RI SM + K +VA N
Sbjct: 1353 MMGMGFASSARRGRGPKKAPIREAVLPPIKVLIVEDNPINQRILSMFMGKKKIKYDVANN 1412
Query: 59 GKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKI 102
G++AV+ ++TG +H++ +D+++PVMDGI+ATK +R ++ + I
Sbjct: 1413 GRDAVEKWKTGG-YHLILMDIQLPVMDGIQATKEIRRLERSANI 1455
>gi|387888623|ref|YP_006318921.1| capsular synthesis regulator component C RcsC [Escherichia blattae
DSM 4481]
gi|414592690|ref|ZP_11442339.1| colanic acid biosynthesis two-component histidine kinase RcsC
[Escherichia blattae NBRC 105725]
gi|386923456|gb|AFJ46410.1| capsular synthesis regulator component C RcsC [Escherichia blattae
DSM 4481]
gi|403196171|dbj|GAB79991.1| colanic acid biosynthesis two-component histidine kinase RcsC
[Escherichia blattae NBRC 105725]
Length = 949
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/121 (32%), Positives = 69/121 (57%), Gaps = 6/121 (4%)
Query: 17 SENPVSKNRP-----YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK 71
+E P N P LVVDD P+ RR+ + L S+G++ + A++G +A+++ +
Sbjct: 810 AELPAVVNAPECNDDMMILVVDDHPINRRLLADQLGSLGYQCKTAQDGVDALNVL-SKNH 868
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
IV D+ MP MDG T+ +R + + ++GVT+ ER+ + +G+D C +KP+T
Sbjct: 869 IDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEERQRCLASGMDSCLSKPVT 928
Query: 132 M 132
+
Sbjct: 929 L 929
>gi|407701521|ref|YP_006826308.1| GAF sensor hybrid histidine kinase [Alteromonas macleodii str.
'Black Sea 11']
gi|407250668|gb|AFT79853.1| GAF sensor hybrid histidine kinase [Alteromonas macleodii str.
'Black Sea 11']
Length = 702
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 73/116 (62%), Gaps = 7/116 (6%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK----FHIVFIDMEMP 82
+ AL+V+D+ + + + LK VG ++AENG+EAV+ + K + I+ +D MP
Sbjct: 564 FKALIVEDNEINQLVIKEQLKEVGLSADLAENGEEAVNKVKASLKENSPYAIILMDCHMP 623
Query: 83 VMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
VMDG+EAT+ +RAM E++ I+ +T+ ++E +++G+D +KP+ ++++
Sbjct: 624 VMDGLEATRHIRAMGEETRDVPIIALTANALTGDKEKCLKSGMDDFISKPVGVSRL 679
>gi|372271293|ref|ZP_09507341.1| multi-sensor hybrid histidine kinase [Marinobacterium stanieri S30]
Length = 874
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 32/109 (29%), Positives = 67/109 (61%), Gaps = 3/109 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+P+ R++ ++++ G + + E+G E ++ +G F +V +D+ MP +DG++
Sbjct: 620 LIAEDNPVNRKMMEVLMERAGAEYHLCEDGLEVLEALNSGQSFDLVLMDVHMPNLDGLDT 679
Query: 90 TKAMRAM---KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
T+A+R + + E I+ VT+ +RE + AG+D TKP+ ++K+
Sbjct: 680 TRAIRQLSGPQAEIPIIAVTADALAGDREKCLAAGMDDYLTKPVRLSKL 728
>gi|334120362|ref|ZP_08494443.1| integral membrane sensor hybrid histidine kinase [Microcoleus
vaginatus FGP-2]
gi|333456709|gb|EGK85339.1| integral membrane sensor hybrid histidine kinase [Microcoleus
vaginatus FGP-2]
Length = 1053
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 73/121 (60%), Gaps = 4/121 (3%)
Query: 24 NRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
N+P Y LVVDD R + +L+ +G++V A NG+EA+ ++ T K H++++DM+MP
Sbjct: 833 NQPSYRILVVDDKWESRLLLVHLLEPLGWEVREAVNGQEAIRIWETW-KPHLIWMDMQMP 891
Query: 83 VMDGIEATKAMRAMKVE--SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
V+DG EAT+ ++A E + I+ +T+ E ER + + +G D C +KP I +
Sbjct: 892 VIDGYEATRQIKAKIQEEATPILALTASAFEEERAIVLSSGCDDCVSKPFQEEVIFAKMA 951
Query: 141 E 141
E
Sbjct: 952 E 952
>gi|39726369|gb|AAR30127.1| putative histidine kinase HHK3p [Gibberella moniliformis]
Length = 988
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR---TGAKFHIVF 76
P + ++P L+VDD+ + RI M K G A +G +AV+LF+ T A ++
Sbjct: 855 PPTTSKP-MTLIVDDNAVNLRILEMYCKKRGLPYLSAIDGHQAVELFKKQQTSAPIDLIL 913
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVG--VTSRNSETEREVFMQAGLDLCYTKPL 130
+D++MPV DGI AT+ +RAM+ SK V VT ++S +RE +AG D KP+
Sbjct: 914 MDLQMPVCDGISATRQIRAMETSSKAVLFIVTGQDSLMDREAASKAGADNYLVKPV 969
>gi|449302953|gb|EMC98961.1| hypothetical protein BAUCODRAFT_22270 [Baudoinia compniacensis UAMH
10762]
Length = 1327
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/155 (27%), Positives = 81/155 (52%), Gaps = 21/155 (13%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
G +S+ + P+ + L+V+D+ + +R+ LK++G +V +A +G EA++
Sbjct: 1168 GVASAGDVEATREPLQRK----VLIVEDNLVNQRVLQKQLKNLGTEVHLANHGGEALEKL 1223
Query: 67 RTGA-----------KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVG------VTSRN 109
R + +V +D EMPVMDG+ TK +R ++ E K+ G VT+
Sbjct: 1224 RQSTYWAGDGGPGKLELGVVLMDQEMPVMDGLTCTKKIRELEQEGKLTGHVPIIAVTANA 1283
Query: 110 SETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
+ + ++AG+D +KP + ++VP +EEL +
Sbjct: 1284 RPEQVQTALKAGMDDVVSKPFRIPELVPKIEELME 1318
>gi|377576514|ref|ZP_09805498.1| colanic acid biosynthesis two-component histidine kinase RcsC
[Escherichia hermannii NBRC 105704]
gi|377542546|dbj|GAB50663.1| colanic acid biosynthesis two-component histidine kinase RcsC
[Escherichia hermannii NBRC 105704]
Length = 949
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/132 (31%), Positives = 75/132 (56%), Gaps = 7/132 (5%)
Query: 3 IGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
+G G + + A + + +N LVVDD P+ RR+ + L S+G++ + A +G +A
Sbjct: 804 VGTAGGNGALPAPTATS--EQNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDA 861
Query: 63 VDLFRTGAKFHI--VFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQA 120
+ + AK HI V D+ MP MDG T+ +R + + +VGVT+ E++ +++
Sbjct: 862 LSVL---AKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLES 918
Query: 121 GLDLCYTKPLTM 132
G+D C +KP+T+
Sbjct: 919 GMDSCLSKPVTL 930
>gi|261340634|ref|ZP_05968492.1| sensor protein RcsC [Enterobacter cancerogenus ATCC 35316]
gi|288317047|gb|EFC55985.1| sensor protein RcsC [Enterobacter cancerogenus ATCC 35316]
Length = 948
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/115 (33%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E+ S N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV
Sbjct: 816 ESLASLNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVLS 874
Query: 78 DMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 875 DVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|355622062|ref|ZP_09046493.1| hypothetical protein HMPREF1020_00572 [Clostridium sp. 7_3_54FAA]
gi|354823168|gb|EHF07506.1| hypothetical protein HMPREF1020_00572 [Clostridium sp. 7_3_54FAA]
Length = 748
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 71/122 (58%), Gaps = 7/122 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA-KFHIVFIDMEMPVMDGIE 88
L+V+D+ + I +L G V+VA +G EA++ FR K+ I+F+D++MPVMDG
Sbjct: 626 LLVEDNTLNAEIAQTLLTDYGLHVDVASDGNEALEFFRADTNKYDIIFMDVQMPVMDGYH 685
Query: 89 ATKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
AT A+R ++ ++ I+G+++ + + + + G+D TKP+ + K+ LL +
Sbjct: 686 ATAAIRDLESKNSKHSHTVIIGMSANAFKEDVDKALACGMDDYITKPIDIKKLQNLLRKF 745
Query: 143 QK 144
K
Sbjct: 746 CK 747
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 37/70 (52%), Gaps = 4/70 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI----VFIDMEMPVM 84
L+VDDD + ++LK +G E NG +AV + K H+ V +D +MP M
Sbjct: 483 CLIVDDDRDVCENTVLLLKEIGMHSEWVLNGADAVVYVESAHKRHLDYNAVILDWQMPDM 542
Query: 85 DGIEATKAMR 94
DGIE + +R
Sbjct: 543 DGIETARRIR 552
>gi|429087411|ref|ZP_19150143.1| Two-component sensor protein RcsC [Cronobacter universalis NCTC
9529]
gi|426507214|emb|CCK15255.1| Two-component sensor protein RcsC [Cronobacter universalis NCTC
9529]
Length = 948
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
+N LVVDD P+ RR+ + L S+G++ A +G +A+++ + IV D+ MP
Sbjct: 821 QNEDMMILVVDDHPINRRLLADQLGSLGYQCRTANDGVDALNVL-SKNHIDIVLSDVNMP 879
Query: 83 VMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 880 NMDGYRLTQRIRELGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|86608001|ref|YP_476763.1| sensory box histidine kinase/response regulator [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|86556543|gb|ABD01500.1| sensory box histidine kinase/response regulator [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 1526
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 72/119 (60%), Gaps = 12/119 (10%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+P+ +++ L+S+G+K +V NG+E +DL + + ++ +D +MPVMDG EA
Sbjct: 1253 LLAEDNPVNQKVALRQLESLGYKADVVANGQEVLDLLQK-VSYDLILMDCQMPVMDGYEA 1311
Query: 90 TKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
T+ +R + S ++ +T+ + +RE +QAG+D +KP+ L E+LQ+
Sbjct: 1312 TRRLRQQERRSGHRTVVIAITANAMQEDRERCLQAGMDDYLSKPV-------LKEDLQR 1363
Score = 40.8 bits (94), Expect = 0.21, Method: Composition-based stats.
Identities = 31/112 (27%), Positives = 52/112 (46%), Gaps = 6/112 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT----GAKFHIVFIDMEMPVMD 85
L VDD+ R+I + G VE AEN +A+D R G F + +DM+MP +D
Sbjct: 1100 LAVDDNATNRKILRCQATTWGMVVEEAENAYQAMDKLRQAVREGRPFPLAVLDMQMPEVD 1159
Query: 86 GIEATKAMRA--MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
G + ++A E+++V +TS + G KP+ +++
Sbjct: 1160 GETLGRWIKADPQLAETQLVMMTSLGLGEHSRRAAEIGFAAYLVKPVKQSRL 1211
>gi|392408688|ref|YP_006445295.1| PAS domain S-box [Desulfomonile tiedjei DSM 6799]
gi|390621824|gb|AFM23031.1| PAS domain S-box [Desulfomonile tiedjei DSM 6799]
Length = 1109
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 67/120 (55%), Gaps = 5/120 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP L+ +D+ +++ S +L +G + V NG EAV+ + G F ++ +D++MP+M
Sbjct: 855 RPLRILLAEDNAFNQKVASGMLSGMGHSISVVPNGAEAVEAYTRGG-FDVILMDVQMPLM 913
Query: 85 DGIEATKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
DG EAT A+RA + IV +T+ +RE + AG+D KP++ ++ LE
Sbjct: 914 DGFEATAAIRAFEKNGAPRIPIVAMTAHAMAGDRERCLNAGMDGYVAKPISSEELFCALE 973
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 68/135 (50%), Gaps = 10/135 (7%)
Query: 18 ENPVSKN----RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV----DLFRTG 69
E PVS++ + L+VDD+ RRI +L G +NG+ A+ + ++ G
Sbjct: 698 EIPVSQDLRTLKGTRVLIVDDNATNRRILVELLIQWGMIPSAVDNGRTALKTLRERYKMG 757
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYT 127
F +V +D MP MDG + ++A++A+ + I+ +TS + E AG++ C
Sbjct: 758 TPFAMVLVDCMMPEMDGFQVSEAIKAIPELASTHIIMLTSALPDYSAEKCRAAGIETCLL 817
Query: 128 KPLTMAKIVPLLEEL 142
KP+ + + + EL
Sbjct: 818 KPIHKSNLYSAIHEL 832
>gi|119503200|ref|ZP_01625284.1| Multi-sensor Hybrid Histidine Kinase [marine gamma proteobacterium
HTCC2080]
gi|119460846|gb|EAW41937.1| Multi-sensor Hybrid Histidine Kinase [marine gamma proteobacterium
HTCC2080]
Length = 664
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/148 (31%), Positives = 78/148 (52%), Gaps = 9/148 (6%)
Query: 5 AEGASSSKKARISENPVSKNRPYF--ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
AE + K + +P + + F LVVDD + R I +L ++G K VA NG+EA
Sbjct: 508 AEPTGTPPKLAVKVDPKTSSALTFLRVLVVDDSEVNRFILCELLGTLGIKATVACNGEEA 567
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK------IVGVTSRNSETEREV 116
V F+ + ++F+D++MPVMDG+ AT A++ ++ + IVGV++ +RE
Sbjct: 568 VAAFKH-STLDVIFMDIQMPVMDGVAATAAIKTLQSDQNFSPDCVIVGVSAHAMSGDREK 626
Query: 117 FMQAGLDLCYTKPLTMAKIVPLLEELQK 144
++ G+ TKP+ + L L K
Sbjct: 627 YLALGMSDYLTKPIDRKHLESCLSALAK 654
>gi|32475597|ref|NP_868591.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1]
gi|32446139|emb|CAD75968.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1]
Length = 801
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
LVVDD +R I L+ G KV+ AE+G++ VD +G + ++ +DM+MPV+D
Sbjct: 653 LVVDDRRDVRHISQHFLEKAGAKVDTAEDGQQGVDAAIQARDSGHPYDLIVMDMQMPVVD 712
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G++AT +R+ ++ I+ +T+ + +R+ + G D +KP+ ++V ++
Sbjct: 713 GLQATALLRSAGIDWPIIALTADAMKGDRDRCLNGGCDDYLSKPIDHIQLVSMV 766
>gi|403416666|emb|CCM03366.1| predicted protein [Fibroporia radiculosa]
Length = 1168
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 62/90 (68%), Gaps = 2/90 (2%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L+VDD+P+ + I S +K K +VA+NG+EAV ++TG+ FH++ +D++MPVMD
Sbjct: 961 PISVLIVDDNPINQTILSTFMKKKKIKFDVAKNGEEAVTKWQTGS-FHLILMDIQMPVMD 1019
Query: 86 GIEATKAMRAMKVESKIVGV-TSRNSETER 114
GIEATK +R ++ + + G T+ SE ++
Sbjct: 1020 GIEATKEIRRVEKMNAMGGFPTTPQSEGQQ 1049
>gi|440717843|ref|ZP_20898318.1| sensory transduction histidine kinase [Rhodopirellula baltica
SWK14]
gi|436436968|gb|ELP30649.1| sensory transduction histidine kinase [Rhodopirellula baltica
SWK14]
Length = 801
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
LVVDD +R I L+ G KV+ AE+G++ VD +G + ++ +DM+MPV+D
Sbjct: 653 LVVDDRRDVRHISQHFLEKAGAKVDTAEDGQQGVDAAIQARDSGHPYDLIVMDMQMPVVD 712
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G++AT +R+ ++ I+ +T+ + +R+ + G D +KP+ ++V ++
Sbjct: 713 GLQATALLRSAGIDWPIIALTADAMKGDRDRCLNGGCDDYLSKPIDHIQLVSMV 766
>gi|395329544|gb|EJF61930.1| histidine kinase [Dichomitus squalens LYAD-421 SS1]
Length = 1238
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/124 (33%), Positives = 72/124 (58%), Gaps = 13/124 (10%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK---- 71
++EN V PY L+ +D+ + +++ IL+ G +VE+AENG+ AVD F+ +
Sbjct: 1078 VAENDV----PYDILIAEDNLVNQKLAVKILEKYGHQVEIAENGQLAVDAFKARVQRNRP 1133
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCY 126
F ++ +D+ MP M G+EAT+ +R + + I+ +T+ +RE +QAG+D
Sbjct: 1134 FDVILMDVSMPFMGGMEATELIRTYEQTHGLEPTPIIALTAHAMIGDRERCLQAGMDDHI 1193
Query: 127 TKPL 130
TKPL
Sbjct: 1194 TKPL 1197
>gi|392539933|ref|ZP_10287070.1| Signal transduction histidine kinase [Pseudoalteromonas marina
mano4]
Length = 573
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D+P+ I + IL + + E A+NGK A ++ T ++ ++F+D+ MP+MDG EA
Sbjct: 458 LVVEDNPLNMHILTRILSQLNYSYECAKNGKVACEM-ATKNEYQVIFMDLNMPIMDGFEA 516
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
K +R + I+ VT+ SE++ + Q G + KP++ + +L
Sbjct: 517 IKKIRIFDANTPIIVVTANTSESDIAITTQLGANGHVFKPISTQALAEVL 566
>gi|166030935|ref|ZP_02233764.1| hypothetical protein DORFOR_00616 [Dorea formicigenerans ATCC
27755]
gi|166029202|gb|EDR47959.1| response regulator receiver domain protein [Dorea formicigenerans
ATCC 27755]
Length = 995
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/131 (29%), Positives = 80/131 (61%), Gaps = 10/131 (7%)
Query: 22 SKNRPYFA----LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT--GAKFHIV 75
++NR +A L+V+D+ + R I + I+K +G +V+ AE+G +AV++ + G K+ ++
Sbjct: 862 AENRKSYAGKKVLLVEDNELNREIATAIMKEIGLEVDTAEDGTDAVNIMSSAEGRKYDLI 921
Query: 76 FIDMEMPVMDGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
F+D++MP MDG AT+ +R + I+ +T+ E +R+ ++AG++ KP++
Sbjct: 922 FMDIQMPKMDGYTATREIRTLNNHKCANIPIIAMTANAFEEDRKKAVKAGMNGHIAKPIS 981
Query: 132 MAKIVPLLEEL 142
I+ L+++
Sbjct: 982 ADVILENLDQI 992
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/141 (29%), Positives = 72/141 (51%), Gaps = 12/141 (8%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV----DLFRTGAK 71
+ PV + + ALVVDDD S +L+ + + +GKEAV + + +
Sbjct: 716 VKREPVPELKGARALVVDDDAQTCMSVSRMLREIEMTADWTTSGKEAVLRAKEAYEQNQE 775
Query: 72 FHIVFIDMEMPVMDGIEATKAMR-AMKVESKIVGVTSRN-SETEREVFMQAGLDLCYTKP 129
F + ID MP M+GIE + +R + E I+ +T+ + S+ E+E +AG+ +KP
Sbjct: 776 FKVYIIDWLMPDMNGIETVRRIRMVVGEEYPIIILTAYDWSDVEQEA-REAGVTAFVSKP 834
Query: 130 LTMAKIVPLL-----EELQKN 145
L ++++ +L EL KN
Sbjct: 835 LFLSELREVLMSQAQRELLKN 855
>gi|300723733|ref|YP_003713040.1| hybrid sensory histidine kinase [Xenorhabdus nematophila ATCC
19061]
gi|297630257|emb|CBJ90908.1| hybrid sensory histidine kinase in two-component regulatory system
with RcsB and YojN, regulates capsule biosynthesis, cell
division genes, OsmC expression [Xenorhabdus nematophila
ATCC 19061]
Length = 930
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/112 (33%), Positives = 61/112 (54%), Gaps = 1/112 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ R + L S+GF +A +G EA++ + I+ D+ MP MDG E
Sbjct: 811 LVVDDHPINRHLLVDQLNSIGFNTSMANDGIEAIEYIKNNPT-DIILTDVNMPNMDGYEL 869
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
T+ +R+ I+G+T+ E+E G+D C KP+++A + +L E
Sbjct: 870 TQYLRSKGYAKPIIGITANALAEEKERCTNVGMDSCLPKPVSLAILKNILIE 921
>gi|411119419|ref|ZP_11391799.1| chemotaxis protein histidine kinase-like protein [Oscillatoriales
cyanobacterium JSC-12]
gi|410711282|gb|EKQ68789.1| chemotaxis protein histidine kinase-like protein [Oscillatoriales
cyanobacterium JSC-12]
Length = 1805
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
+ E P +K P L+VDD +R + SM VG++VE A +G+EA + R+G IV
Sbjct: 1669 LQEPPATKTEP-MVLIVDDSITVRELLSMTFNKVGYRVEQARDGQEAWEKLRSGLPCDIV 1727
Query: 76 FIDMEMPVMDGIEATKAMR--AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKP 129
F D+EMP MDG+E ++ A I +TSR ++ R++ G +TKP
Sbjct: 1728 FCDIEMPRMDGLELLSRIQKDANLKHLPIAMLTSRGADRHRQMAASLGASGYFTKP 1783
>gi|406897000|gb|EKD41090.1| two-component hybrid sensor and regulator histidine kinase, partial
[uncultured bacterium]
Length = 219
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 70/114 (61%), Gaps = 2/114 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+DDP+ + + S +L G V++A NG EA+ + + V +D+ MP MDG+ A
Sbjct: 102 LVVEDDPVNQMVTSQLLTRAGILVDIAGNGHEALAALQKKT-YDAVLMDVIMPKMDGLTA 160
Query: 90 TKAMR-AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
TKA+R +++++ I+ +T+ + +RE + AG+D TKP+ + + +LE+
Sbjct: 161 TKAIRQSLRLDLPIIALTANAIKGDREKCLAAGMDAYLTKPVEIQSMYQILEKF 214
>gi|301057759|ref|ZP_07198828.1| response regulator receiver domain protein [delta proteobacterium
NaphS2]
gi|300448070|gb|EFK11766.1| response regulator receiver domain protein [delta proteobacterium
NaphS2]
Length = 438
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 70/120 (58%), Gaps = 19/120 (15%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD-LFRTGAKFHIVFIDMEMPVMDGIE 88
L+V+D+P+ +++ M+LK G++V+VA NGKEAV+ L + F ++F+D++MP MDG+
Sbjct: 303 LLVEDNPVNQKLAKMMLKKAGYQVQVANNGKEAVEMLMASQNGFDLIFMDVQMPEMDGLT 362
Query: 89 ATKAMRAMKVES------------------KIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
AT+ +R ++ E I+ +T+ + ++E M AG+D KP+
Sbjct: 363 ATREIRRLEKEHVLRPPRGRDFHPLTRRRIPIIAMTAHAMKGDQETCMDAGMDDYVAKPI 422
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 65/149 (43%), Gaps = 15/149 (10%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
G S SK++R PVS AL+VDD+ +I + L+ VG ++ + + G + + L
Sbjct: 122 GKSESKESR-PYTPVSLTGKK-ALLVDDNETNLKILARYLEPVGMRLVLLDKGMDVLPLL 179
Query: 67 RTGAK----FHIVFIDMEMPVMDGIEATKAMR---------AMKVESKIVGVTSRNSETE 113
F I D++MP M G E + +R M + S + S E +
Sbjct: 180 EKSIDEQDPFDICIADIQMPDMSGYEVARQIRLFESPHARLRMSIRSLPLMALSSMMERD 239
Query: 114 REVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
+ + G D KP+ ++ +LE +
Sbjct: 240 AKRCGEVGFDGFLAKPVRRERLYRMLERI 268
>gi|183220472|ref|YP_001838468.1| putative two-component response regulator [Leptospira biflexa
serovar Patoc strain 'Patoc 1 (Paris)']
gi|167778894|gb|ABZ97192.1| Putative two-component response regulator; putative membrane
protein [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Paris)']
Length = 807
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 75/130 (57%), Gaps = 4/130 (3%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E +++ P L+ DDD + ++ M LK +G+ +AENG++ +++ ++ +
Sbjct: 676 EKNLAEKYPAKILIADDDSINLKVSKMFLKKLGYVALIAENGEKTLEVVEK-ENPDLILL 734
Query: 78 DMEMPVMDGIEATKAMRA---MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
D++MP +DGI+ TK +R +K + I+ +T+ E E+E + +G+D TKPL M
Sbjct: 735 DVQMPDIDGIQVTKQIRKNKNLKRQPIIIALTANVMEEEKENCLSSGMDDFMTKPLLMQD 794
Query: 135 IVPLLEELQK 144
+V ++++ K
Sbjct: 795 LVYMIKKWSK 804
>gi|189910583|ref|YP_001962138.1| two component response regulator sensor histidine kinase/response
regulator subunits [Leptospira biflexa serovar Patoc
strain 'Patoc 1 (Ames)']
gi|167775259|gb|ABZ93560.1| Sensor histidine kinase and response regulator of a two component
complex [Leptospira biflexa serovar Patoc strain 'Patoc
1 (Ames)']
Length = 812
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 75/130 (57%), Gaps = 4/130 (3%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E +++ P L+ DDD + ++ M LK +G+ +AENG++ +++ ++ +
Sbjct: 681 EKNLAEKYPAKILIADDDSINLKVSKMFLKKLGYVALIAENGEKTLEVVEK-ENPDLILL 739
Query: 78 DMEMPVMDGIEATKAMRA---MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
D++MP +DGI+ TK +R +K + I+ +T+ E E+E + +G+D TKPL M
Sbjct: 740 DVQMPDIDGIQVTKQIRKNKNLKRQPIIIALTANVMEEEKENCLSSGMDDFMTKPLLMQD 799
Query: 135 IVPLLEELQK 144
+V ++++ K
Sbjct: 800 LVYMIKKWSK 809
>gi|374586169|ref|ZP_09659261.1| integral membrane sensor hybrid histidine kinase [Leptonema illini
DSM 21528]
gi|373875030|gb|EHQ07024.1| integral membrane sensor hybrid histidine kinase [Leptonema illini
DSM 21528]
Length = 686
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 66/110 (60%), Gaps = 1/110 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D P ++ + +L+S G VE+A NG+EAV + A F I+F+D++MPVMDG+ A
Sbjct: 567 LLAEDSPDLQILIRHMLESTGCTVELASNGQEAV-IAAQAAPFDIIFMDVQMPVMDGLRA 625
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+ +R + +V +T+ ER + AG++ +KP+ ++ ++
Sbjct: 626 TQELRRLGYAGPVVALTAHAMTEERNRCLAAGMNEHISKPVRRQALIDVI 675
>gi|145538810|ref|XP_001455105.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422893|emb|CAK87708.1| unnamed protein product [Paramecium tetraurelia]
Length = 892
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 70/125 (56%), Gaps = 12/125 (9%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-------FHIVFIDMEMP 82
L VDDD ++ +I+ +GF V++A NG++A+D+ K F+ + +D +MP
Sbjct: 766 LSVDDDIFNQKALQVIITQMGFNVQIAYNGQQAIDVIEKTEKCSDACQLFYFILMDCQMP 825
Query: 83 VMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVP 137
+MDG TK + M E+ I+G+T+ NS + E M+ G+ +TKPL ++ +
Sbjct: 826 IMDGWTTTKMLMGMIQENLIPDIPIIGLTAFNSAEDIERCMEVGMREVFTKPLNISLLKQ 885
Query: 138 LLEEL 142
+L +L
Sbjct: 886 VLLKL 890
>gi|424800371|ref|ZP_18225913.1| Two-component sensor protein RcsC [Cronobacter sakazakii 696]
gi|423236092|emb|CCK07783.1| Two-component sensor protein RcsC [Cronobacter sakazakii 696]
Length = 949
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
S +N LVVDD P+ RR+ + L ++G++ A +G +A+++ + IV
Sbjct: 816 SSTSAEQNEDMMILVVDDHPINRRLLADQLGTLGYQCRTANDGVDALNVL-SKNHIDIVL 874
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 875 SDVNMPNMDGYRLTQRIRELGMTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 930
>gi|374585381|ref|ZP_09658473.1| multi-sensor hybrid histidine kinase [Leptonema illini DSM 21528]
gi|373874242|gb|EHQ06236.1| multi-sensor hybrid histidine kinase [Leptonema illini DSM 21528]
Length = 795
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y L+V+D + + +++++G V +A NG+E V LF + + H +++D MPVMDG
Sbjct: 596 YRILIVEDQRDNQLLLQTLMENIGLSVRIASNGEEGVRLFES-YRPHFIWMDRRMPVMDG 654
Query: 87 IEATKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
IEATK +R++ + +IV VT+ +R+ + GLD KP A+I L E
Sbjct: 655 IEATKKIRSLPGGADVRIVAVTASAFAEQRDEMLAVGLDDFVRKPYRPAEIYDCLAE 711
>gi|416394702|ref|ZP_11686249.1| two-component hybrid sensor and regulator [Crocosphaera watsonii WH
0003]
gi|357263210|gb|EHJ12245.1| two-component hybrid sensor and regulator [Crocosphaera watsonii WH
0003]
Length = 723
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/121 (36%), Positives = 71/121 (58%), Gaps = 4/121 (3%)
Query: 24 NRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
N+P Y LVVDD R + +L +GF++ A NGKEA+ +++ H++++DM MP
Sbjct: 514 NQPQYRILVVDDRYSNRELVVKLLTPLGFEIRTASNGKEAIQVWQQWEP-HLIWMDMRMP 572
Query: 83 VMDGIEATKAMR-AMKVE-SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
+MDG EATK ++ MK + + I+ +T+ E E+ V + G D KP A+I +E
Sbjct: 573 IMDGYEATKVIKTTMKGQATAIIALTASVFEEEKAVVLSTGCDSFIRKPFREAEIFDAME 632
Query: 141 E 141
+
Sbjct: 633 K 633
>gi|172036053|ref|YP_001802554.1| two-component hybrid sensor and regulator [Cyanothece sp. ATCC
51142]
gi|354552858|ref|ZP_08972165.1| multi-sensor hybrid histidine kinase [Cyanothece sp. ATCC 51472]
gi|171697507|gb|ACB50488.1| two-component hybrid sensor and regulator [Cyanothece sp. ATCC
51142]
gi|353554688|gb|EHC24077.1| multi-sensor hybrid histidine kinase [Cyanothece sp. ATCC 51472]
Length = 1084
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/128 (31%), Positives = 74/128 (57%), Gaps = 8/128 (6%)
Query: 21 VSKNRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
++ N+P Y L+++D+ R++ + +LK +GF ++ A NG+E V L+ T ++++D+
Sbjct: 867 LAPNQPTYSLLIIEDNSANRKVLTNLLKPLGFMIKEARNGEEGVKLWETWQP-DLIWMDL 925
Query: 80 EMPVMDGIEATKAMRAMKVE------SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
EMPVMDG EAT+ +R + +KI+ +T+ RE + G D +KP + +
Sbjct: 926 EMPVMDGYEATQLIRTKMKQFNPTKTTKIIALTASVLAENREAVLSIGCDDFVSKPFSES 985
Query: 134 KIVPLLEE 141
I+ L +
Sbjct: 986 TILDKLAQ 993
>gi|428226096|ref|YP_007110193.1| CheA signal transduction histidine kinase [Geitlerinema sp. PCC 7407]
gi|427985997|gb|AFY67141.1| CheA signal transduction histidine kinase [Geitlerinema sp. PCC 7407]
Length = 2662
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 64/114 (56%), Gaps = 3/114 (2%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E PV K P L+VDD +R + SM G++VE A +G+EA + R+G +VF
Sbjct: 2527 EPPVVKTEPT-VLIVDDSITVRELLSMTFNKSGYRVEQARDGQEAWEKLRSGLPCDLVFC 2585
Query: 78 DMEMPVMDGIEATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKP 129
D+EMP MDG+E M+ ++ I +TSR ++ R++ +Q G +TKP
Sbjct: 2586 DIEMPRMDGLELLSRMQKDPSLNRLPIAMLTSRGADRHRQMAVQLGARGYFTKP 2639
>gi|421609149|ref|ZP_16050351.1| sensory transduction histidine kinase [Rhodopirellula baltica SH28]
gi|408500074|gb|EKK04531.1| sensory transduction histidine kinase [Rhodopirellula baltica SH28]
Length = 784
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
LVVDD +R I L+ G KV+ AE+G++ VD +G + ++ +DM+MPV+D
Sbjct: 636 LVVDDRRDVRHISQHFLEKAGAKVDTAEDGQQGVDAAIQARDSGHPYDLIVMDMQMPVVD 695
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G++AT +R+ ++ I+ +T+ + +R+ + G D +KP+ ++V ++
Sbjct: 696 GLQATALLRSAGIDWPIIALTADAMKGDRDRCLNGGCDDYLSKPIDHIQLVSMV 749
>gi|421614598|ref|ZP_16055652.1| two-component hybrid sensor and regulator [Rhodopirellula baltica
SH28]
gi|408494685|gb|EKJ99289.1| two-component hybrid sensor and regulator [Rhodopirellula baltica
SH28]
Length = 953
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 67/118 (56%), Gaps = 2/118 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF--RTGAKFHIVFIDMEMPVMDGI 87
LVVDD IR + ++ G V A NG+EA+D + A+ +V +DM+MPV+DG
Sbjct: 836 LVVDDRRDIRYLAQHFIEKAGGTVITATNGQEAIDTIFAKPKAEIDLVVMDMQMPVLDGY 895
Query: 88 EATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
+AT +R E ++ +T+ +++RE + AG TKPL K++ +++ L K+
Sbjct: 896 DATAELRRRGCELPVIALTANAMKSDREECLAAGCTDYTTKPLDSQKLIAMIDRLLKS 953
>gi|407684320|ref|YP_006799494.1| diguanylate cyclase [Alteromonas macleodii str. 'English Channel
673']
gi|407245931|gb|AFT75117.1| GGDEF domain protein [Alteromonas macleodii str. 'English Channel
673']
Length = 1373
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG---AKFHIVFID 78
S + Y L+V+D+ + + + + +L+S G+ V+VA NG EA++L ++ A + + +D
Sbjct: 1240 SDDNAYRILLVEDNAINQIVATNVLESEGYVVDVANNGVEALELLKSSKLKAHYSAIVMD 1299
Query: 79 MEMPVMDGIEATKAMR---AMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+MP MDG EATK +R A +V + I+ +T+ + ++++ M+AG+D TKP+
Sbjct: 1300 CQMPEMDGFEATKLIRYGAAGEVYKRVPIIAMTANAMQGDKDMCMKAGMDDFLTKPIEHN 1359
Query: 134 KIVPLLE 140
K+ L+
Sbjct: 1360 KVTSTLQ 1366
>gi|317154768|ref|YP_004122816.1| PAS sensor protein [Desulfovibrio aespoeensis Aspo-2]
gi|316945019|gb|ADU64070.1| PAS sensor protein [Desulfovibrio aespoeensis Aspo-2]
Length = 1521
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/119 (31%), Positives = 70/119 (58%), Gaps = 2/119 (1%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP LVV+D+ R + +L +G + AE+G+EA+++ T A F + +D++MP +
Sbjct: 1398 RPLSILVVEDERTNRAVAQRLLGKLGHEAACAESGEEAIEILATAA-FDCILMDIQMPGL 1456
Query: 85 DGIEATKAMR-AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
DG+E T+A+R + ++ I+ +T+ E +R+ F+ AG+ KP + ++ LE +
Sbjct: 1457 DGVETTRAIRDTLGLDIPIIALTAHAMEGDRKRFLDAGMQGYVAKPFDLPELQDELERV 1515
>gi|406597307|ref|YP_006748437.1| diguanylate cyclase [Alteromonas macleodii ATCC 27126]
gi|406374628|gb|AFS37883.1| GGDEF domain protein [Alteromonas macleodii ATCC 27126]
Length = 1373
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/127 (32%), Positives = 77/127 (60%), Gaps = 8/127 (6%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG---AKFHIVFID 78
S + Y L+V+D+ + + + + +L+S G+ V+VA NG EA++L ++ A + + +D
Sbjct: 1240 SDDNAYRILLVEDNAINQIVATNVLESEGYVVDVANNGVEALELLKSSKLKAHYSAIVMD 1299
Query: 79 MEMPVMDGIEATKAMR---AMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+MP MDG EATK +R A +V + I+ +T+ + ++++ M+AG+D TKP+
Sbjct: 1300 CQMPEMDGFEATKLIRYGAAGEVYKRVPIIAMTANAMQGDKDMCMKAGMDDFLTKPIEHN 1359
Query: 134 KIVPLLE 140
K+ L+
Sbjct: 1360 KVTSTLQ 1366
>gi|417300803|ref|ZP_12087991.1| sensory transduction histidine kinase [Rhodopirellula baltica WH47]
gi|327542873|gb|EGF29329.1| sensory transduction histidine kinase [Rhodopirellula baltica WH47]
Length = 784
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 67/114 (58%), Gaps = 4/114 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
LVVDD +R I L+ G KV+ AE+G++ VD +G + ++ +DM+MPV+D
Sbjct: 636 LVVDDRRDVRHISQHFLEKAGAKVDTAEDGQQGVDAAIQARDSGHPYDLIVMDMQMPVVD 695
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G++AT +R+ ++ I+ +T+ + +R+ + G D +KP+ ++V ++
Sbjct: 696 GLQATALLRSAGIDWPIIALTADAMKGDRDRCLNGGCDDYLSKPIDHIQLVSMV 749
>gi|163814849|ref|ZP_02206237.1| hypothetical protein COPEUT_00999 [Coprococcus eutactus ATCC 27759]
gi|158449788|gb|EDP26783.1| ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein
[Coprococcus eutactus ATCC 27759]
Length = 599
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 9/131 (6%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
A S N SK R LV +D+P+ +++ +L GF ++AENG++AV+LF+T +
Sbjct: 467 AVFSINAHSKAR---ILVAEDEPVNQQVIGKLLGMAGFSYDIAENGQKAVELFKTKI-YD 522
Query: 74 IVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTK 128
D++MPVMDGI AT+ +R ++ + K I+ VT+R ++E ++ LD K
Sbjct: 523 AALFDVQMPVMDGIAATQEIREIERKEKRKRLPIIAVTARAMFGDKERILENQLDDYIAK 582
Query: 129 PLTMAKIVPLL 139
P + +V L
Sbjct: 583 PYNLNDVVDTL 593
>gi|156933160|ref|YP_001437076.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Cronobacter sakazakii ATCC BAA-894]
gi|156531414|gb|ABU76240.1| hypothetical protein ESA_00970 [Cronobacter sakazakii ATCC BAA-894]
Length = 973
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
S +N LVVDD P+ RR+ + L ++G++ A +G +A+++ + IV
Sbjct: 840 SSTSAEQNEDMMILVVDDHPINRRLLADQLGTLGYQCRTANDGVDALNVL-SKNHIDIVL 898
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 899 SDVNMPNMDGYRLTQRIRELGMTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 954
>gi|389840222|ref|YP_006342306.1| sensor protein RcsC [Cronobacter sakazakii ES15]
gi|429121182|ref|ZP_19181825.1| Two-component sensor protein RcsC [Cronobacter sakazakii 680]
gi|387850698|gb|AFJ98795.1| sensor protein RcsC [Cronobacter sakazakii ES15]
gi|426324338|emb|CCK12562.1| Two-component sensor protein RcsC [Cronobacter sakazakii 680]
Length = 949
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
S +N LVVDD P+ RR+ + L ++G++ A +G +A+++ + IV
Sbjct: 816 SSTSAEQNEDMMILVVDDHPINRRLLADQLGTLGYQCRTANDGVDALNVL-SKNHIDIVL 874
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 875 SDVNMPNMDGYRLTQRIRELGMTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 930
>gi|378766415|ref|YP_005194877.1| two component sensor kinase/response regulator protein RcsC
[Pantoea ananatis LMG 5342]
gi|365185890|emb|CCF08840.1| two component sensor kinase/response regulator protein RcsC
[Pantoea ananatis LMG 5342]
Length = 968
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N L+VDD P+ R + S L ++G++V+ A++G +A+++ IV D+ MP
Sbjct: 841 NDDIMVLIVDDHPINRMLLSEQLGTLGYQVKTAQDGVDALNVLSRN-NIDIVLTDVNMPN 899
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + +VGVT+ E++ M AG+D C +KP+T+
Sbjct: 900 MDGYRLTQRLRQLGHVFPVVGVTANALAEEKQRCMDAGMDNCLSKPVTL 948
>gi|330504152|ref|YP_004381021.1| integral membrane sensor hybrid histidine kinase [Pseudomonas
mendocina NK-01]
gi|328918438|gb|AEB59269.1| integral membrane sensor hybrid histidine kinase [Pseudomonas
mendocina NK-01]
Length = 916
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 41/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-RTGAKFHIVFIDMEMPVMDGIE 88
LV +D+P+ + + LK G+ V + NG+ AVD + R A H++ +D EMPVMDG E
Sbjct: 790 LVAEDNPVNQLVVQGFLKKRGYSVRLVTNGQAAVDEYGRDPAAVHLILMDCEMPVMDGFE 849
Query: 89 ATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
AT+ +R ++ + I+ +T+ E R+ + AG+D KPL + LE
Sbjct: 850 ATRQIRRLERSRQVAAVPIIALTAHILEEHRQHGLDAGMDDFLGKPLDSGLLYSTLERFL 909
Query: 144 K 144
K
Sbjct: 910 K 910
>gi|449546781|gb|EMD37750.1| response regulator receiver [Ceriporiopsis subvermispora B]
Length = 635
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 45/167 (26%)
Query: 6 EGASSSKKARIS---ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
+ AS S+K R S EN P L+VDD+P+ I S ++ K +VA+NG+EA
Sbjct: 463 QSASPSQKRRKSVADENAT----PISVLIVDDNPINLTILSTFMRKKNIKYDVAKNGEEA 518
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK--------------------- 101
V +R G +F ++ +D++MPVMDG+EATK +R M+ +
Sbjct: 519 VQKWRIG-EFRLILMDLQMPVMDGLEATKEIRRMERDKDASSDSVPLPPGRQNAPPEKSA 577
Query: 102 ----------------IVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
IV +T+ + ++R + AG D TKP++M
Sbjct: 578 LDIDSGLSTASRPSAIIVALTASSLPSDRTAALSAGCDDFLTKPVSM 624
>gi|359434928|ref|ZP_09225170.1| hypothetical protein P20652_3296 [Pseudoalteromonas sp. BSi20652]
gi|357918503|dbj|GAA61419.1| hypothetical protein P20652_3296 [Pseudoalteromonas sp. BSi20652]
Length = 983
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/119 (31%), Positives = 73/119 (61%), Gaps = 7/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF--RTGAKFHIVFIDMEMPVMDGI 87
L+V+D+ + +R+ +++LK + + +AENG++AVD+ F++V +D +MPVMDG
Sbjct: 863 LLVEDNLINQRVSTLMLKKLNCDITLAENGQQAVDILSKHEDGYFNVVLMDCQMPVMDGF 922
Query: 88 EATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
+AT A+R + KI+ +T+ E++++ AG+D +KP+ +A + LE+
Sbjct: 923 DATAAIRNGDAGDKHKDIKIIALTANAMESDKQRCFDAGMDNYLSKPIQLAILKDKLEQ 981
Score = 49.7 bits (117), Expect = 4e-04, Method: Composition-based stats.
Identities = 39/123 (31%), Positives = 62/123 (50%), Gaps = 7/123 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF--RTGAK---FHIVFIDMEMPVM 84
LVVDD+ R + S L+ G +VE+A + EA+++ R K + I +DM+MP M
Sbjct: 712 LVVDDNKTNRIVISQQLEHWGAQVELASDAYEALEMCEKRINNKQTMYDIAVLDMQMPGM 771
Query: 85 DGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
DGI KA++A +V +TS + + AG + KP+T A ++ L +
Sbjct: 772 DGIALCKALKAHNDYKNMPLVMMTSIAGMEGAQRYSDAGFQAYFPKPVTTADMISALCVI 831
Query: 143 QKN 145
N
Sbjct: 832 TNN 834
>gi|417305855|ref|ZP_12092797.1| signal transduction histidine kinase with CheB and CheR activity
[Rhodopirellula baltica WH47]
gi|327537864|gb|EGF24566.1| signal transduction histidine kinase with CheB and CheR activity
[Rhodopirellula baltica WH47]
Length = 1637
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
L+ DD +R + LK G +VEVAENG++AVD+ R G F + +DM+MP +D
Sbjct: 1518 LIADDMRDVRFVAQHFLKKAGCEVEVAENGRQAVDMVVAASRDGKPFELCLMDMQMPELD 1577
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
G+ A + +R +E ++ +T+ + R + G D +KPL + +++
Sbjct: 1578 GLGAVRELRQRGIELPVIALTADAMKGTRRRLISEGFDEYLSKPLKVNRLL 1628
>gi|322418861|ref|YP_004198084.1| multi-sensor hybrid histidine kinase [Geobacter sp. M18]
gi|320125248|gb|ADW12808.1| multi-sensor hybrid histidine kinase [Geobacter sp. M18]
Length = 823
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/120 (32%), Positives = 75/120 (62%), Gaps = 5/120 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP L+V+D+P+ + + +L+S+G +V+V E+G AV+ R ++ +VF+D +MPVM
Sbjct: 561 RPRQVLLVEDNPVNQEVGKGMLESLGCRVKVVEDGLAAVNEVRQN-RYDLVFMDCQMPVM 619
Query: 85 DGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
DG+EAT+ +RA + + ++ +T+ + +R ++AG D +KP T +I +++
Sbjct: 620 DGLEATRRIRAREEGTGNRVPVIALTAYAMKGDRLACLEAGADEYLSKPFTRDQIAKIMQ 679
>gi|153838245|ref|ZP_01990912.1| signal transduction histidine kinase, partial [Vibrio
parahaemolyticus AQ3810]
gi|149748377|gb|EDM59236.1| signal transduction histidine kinase [Vibrio parahaemolyticus
AQ3810]
Length = 364
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/132 (31%), Positives = 76/132 (57%), Gaps = 6/132 (4%)
Query: 15 RISENPVSKNRPY--FALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF 72
R N + P + L+V+D + +R+ ++L+ +G KV VA +G+EA+ L R A F
Sbjct: 221 RTEANEATNKNPDTPWVLIVEDTEVNQRVVRIMLEQLGLKVSVASHGEEALQLCREHA-F 279
Query: 73 HIVFIDMEMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKP 129
++F+D +MPVMDG AT+ +R M I+ +T+ + +++ +AG++ KP
Sbjct: 280 DLIFMDCQMPVMDGFIATEQIRDMNEWGAHVPIIALTANVVKEDQQRCFEAGMNEFVAKP 339
Query: 130 LTMAKIVPLLEE 141
+T A++ + E+
Sbjct: 340 VTKARLQQIFEQ 351
>gi|144897851|emb|CAM74715.1| PAS [Magnetospirillum gryphiswaldense MSR-1]
Length = 125
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 66/116 (56%), Gaps = 3/116 (2%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVVDD+ + R + +L G+ V++AE+G +A+D G + +V +D+ MP + G +
Sbjct: 7 ALVVDDNDVNRMLAGRLLNKAGWVVDMAEDGAQALDWLE-GNRVDLVLLDISMPGLSGED 65
Query: 89 ATKAMRAMKV--ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
+ +RA ++ +K+V T+ ERE F+ G D TKP++ A + LL L
Sbjct: 66 VCRTVRARQLCQGAKVVAYTAHAMPEEREQFLACGFDAILTKPISKAGMQDLLNTL 121
>gi|429116300|ref|ZP_19177218.1| Two-component sensor protein RcsC [Cronobacter sakazakii 701]
gi|449307510|ref|YP_007439866.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Cronobacter sakazakii SP291]
gi|426319429|emb|CCK03331.1| Two-component sensor protein RcsC [Cronobacter sakazakii 701]
gi|449097543|gb|AGE85577.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Cronobacter sakazakii SP291]
Length = 949
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
S +N LVVDD P+ RR+ + L ++G++ A +G +A+++ + IV
Sbjct: 816 SSTSAEQNEDMMILVVDDHPINRRLLADQLGTLGYQCRTANDGVDALNVL-SKNHIDIVL 874
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 875 SDVNMPNMDGYRLTQRIRELGMTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 930
>gi|421610035|ref|ZP_16051219.1| Signal Transduction Histidine Kinase (STHK) with CheB and CheR
activity [Rhodopirellula baltica SH28]
gi|408499093|gb|EKK03568.1| Signal Transduction Histidine Kinase (STHK) with CheB and CheR
activity [Rhodopirellula baltica SH28]
Length = 1637
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
L+ DD +R + LK G +VEVAENG++AVD+ R G F + +DM+MP +D
Sbjct: 1518 LIADDMRDVRFVAQHFLKKAGCEVEVAENGRQAVDMVVAASRDGKPFELCLMDMQMPELD 1577
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
G+ A + +R +E ++ +T+ + R + G D +KPL + +++
Sbjct: 1578 GLGAVRELRQRGIELPVIALTADAMKGTRRRLISEGFDEYLSKPLKVNRLL 1628
>gi|395242528|ref|ZP_10419525.1| DNA-binding response regulator [Lactobacillus pasteurii CRBIP
24.76]
gi|394480260|emb|CCI85765.1| DNA-binding response regulator [Lactobacillus pasteurii CRBIP
24.76]
Length = 221
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 67/110 (60%), Gaps = 1/110 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+P + R+ ++ L S G+ V NG+EAVD + A F ++ +D+ MPVMDG+ A
Sbjct: 4 LLAEDEPQLNRVITVALTSSGYDVTSVFNGQEAVDAVKENA-FDVLILDIMMPVMDGVTA 62
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
K +R M +S ++ +T++ +R +++G D TKP ++ +++ L
Sbjct: 63 LKTIREMGDKSYVIMLTAKAEIDDRVNGLESGADDYLTKPFSLKELIARL 112
>gi|303246402|ref|ZP_07332681.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
gi|302492112|gb|EFL51987.1| response regulator receiver protein [Desulfovibrio fructosovorans
JJ]
Length = 154
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 68/122 (55%), Gaps = 6/122 (4%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P+ LVVDD + R+I + L+ +E A+NG+EA++ F GA + V +D MPVMD
Sbjct: 27 PWKVLVVDDSSVNRQIVRLYLEEAPIVLEEAQNGREALERFVAGA-YDCVIMDNIMPVMD 85
Query: 86 GIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
G+EAT+ +RA +V + IVG++ + + + AG L KP+ A ++ L
Sbjct: 86 GLEATRRIRAYEVVHGLPPTPIVGISGKAQTADETACLDAGYTLYLRKPVRKAMLLAALT 145
Query: 141 EL 142
L
Sbjct: 146 GL 147
>gi|152993425|ref|YP_001359146.1| hypothetical protein SUN_1842 [Sulfurovum sp. NBC37-1]
gi|151425286|dbj|BAF72789.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 1046
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 76/121 (62%), Gaps = 6/121 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D+ + +++ +L +G +V +A NG+EA+ L R + ++F+D++MPVM GI+A
Sbjct: 762 LVAEDNVINQKLILNVLNKLGLQVTLANNGEEALHL-RQKNNYDMIFMDVQMPVMGGIDA 820
Query: 90 TKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
TK + + +++ IV +T+ + ++E +++AG+D +KPL + + LLE+ +
Sbjct: 821 TKEILTYEEKNRKHHIPIVALTANALQGDKEKYIKAGMDDYLSKPLVLEHLTQLLEKYFE 880
Query: 145 N 145
N
Sbjct: 881 N 881
>gi|146312440|ref|YP_001177514.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Enterobacter sp. 638]
gi|145319316|gb|ABP61463.1| integral membrane sensor hybrid histidine kinase [Enterobacter sp.
638]
Length = 949
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 68/115 (59%), Gaps = 1/115 (0%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
++ V+ N LVVDD P+ RR+ + L S+G++ A +G +A+++ + IV
Sbjct: 817 QSAVAMNDDMMILVVDDHPINRRLLADQLGSLGYQCLTANDGVDALNVL-SKNHIDIVLS 875
Query: 78 DMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E+E +++G+D C +KP+T+
Sbjct: 876 DVNMPNMDGYRLTQRIRQLGMTLPVIGVTANALAEEKERCLESGMDSCLSKPVTL 930
>gi|438098252|ref|ZP_20862660.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
gi|435326461|gb|ELO98273.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Salmonella enterica subsp. enterica serovar
Enteritidis str. 62-1976]
Length = 948
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/116 (31%), Positives = 66/116 (56%), Gaps = 1/116 (0%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++ N LVVDD P+ RR+ + L S+G++ + A +G +A++ A IV
Sbjct: 815 TDKTADSNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNALSKNA-IDIVL 873
Query: 77 IDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 874 SDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|239907556|ref|YP_002954297.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
gi|239797422|dbj|BAH76411.1| two-component hybrid sensor and regulator [Desulfovibrio magneticus
RS-1]
Length = 1011
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/105 (34%), Positives = 65/105 (61%), Gaps = 5/105 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
+V +D P+ +R+ S +L +G + ENG++AV L+ KF + +D++MPVMDGIEA
Sbjct: 769 MVAEDSPVNQRVISHVLHKMGHSFTIVENGQDAVTLWER-RKFDAILMDVQMPVMDGIEA 827
Query: 90 TKAMRAMKVESK----IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +R + + I+ +T+ +++RE + AG++ +KPL
Sbjct: 828 TRRIRELDAHCENPVPIIALTAHAMQSDRERCLDAGMNDYLSKPL 872
>gi|404492663|ref|YP_006716769.1| sensor histidine kinase response regulator, Hpt domain-containing
[Pelobacter carbinolicus DSM 2380]
gi|77544744|gb|ABA88306.1| sensor histidine kinase response regulator, Hpt domain-containing
[Pelobacter carbinolicus DSM 2380]
Length = 1014
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 78/129 (60%), Gaps = 9/129 (6%)
Query: 19 NPVSK-NRPYFA--LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
NP S+ + P A L+V+D+P+ +++ +L+ +G V +A +G+EA+ + + + F ++
Sbjct: 735 NPASETSTPTKARVLLVEDNPVNQQVAKGMLEKLGCNVTLAADGQEALTAY-SHSPFDLL 793
Query: 76 FIDMEMPVMDGIEATKAMRA-----MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
F+D +MP MDG EAT+A+RA K I+ +T+ +RE ++AG+D KP
Sbjct: 794 FMDCQMPNMDGYEATRAIRADEKQHHKTTCPIIAMTAHTLPGDRERCLKAGMDDYLGKPF 853
Query: 131 TMAKIVPLL 139
TM ++ LL
Sbjct: 854 TMRQVRTLL 862
Score = 39.7 bits (91), Expect = 0.38, Method: Composition-based stats.
Identities = 20/60 (33%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
AL+VD P+ RR L+ G K + A++GK+A+ + + F I+ + + +P M G E
Sbjct: 606 ALIVDPHPLTRRSVQQQLREWGIKAKTADHGKKALAMLQ-AQNFQIILVALTLPDMPGRE 664
>gi|343516423|ref|ZP_08753458.1| hypothetical protein VIBRN418_17943 [Vibrio sp. N418]
gi|342796008|gb|EGU31703.1| hypothetical protein VIBRN418_17943 [Vibrio sp. N418]
Length = 569
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD M + I + +LK + ++AENG EA+ G ++ ++F+D MP MDG EA
Sbjct: 457 LVVDDIRMNQVIINQMLKKFAIEPDLAENGLEAIRAAEQG-QYDLIFMDCRMPEMDGFEA 515
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
+RA I+ +T+ + ERE +++G+D TKP T A + ++E+
Sbjct: 516 ANYLRAHHYSRPIIALTAGTTLEERERCIESGMDDILTKPYTAADLKLMIEK 567
>gi|320156372|ref|YP_004188751.1| signal transduction histidine kinase [Vibrio vulnificus MO6-24/O]
gi|319931684|gb|ADV86548.1| signal transduction histidine kinase [Vibrio vulnificus MO6-24/O]
Length = 569
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 10 SSKKARISENPVS--KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
S K R+S++ + ++R LVV+D + + ++L +G V +A NG EA++
Sbjct: 432 SRKLIRLSQDGTTNKRDRALNVLVVEDTHSNQMVIQLLLNKLGHNVFIANNGSEAIEFIE 491
Query: 68 TGAK-FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCY 126
+ + +VF+D+ MPVMDG+ ATK +RA E I+ +T+ ++++ + G+D
Sbjct: 492 SNTESLDVVFMDVSMPVMDGLTATKILRAKGFEVPIIALTAHALASDKQNCLDVGMDSFV 551
Query: 127 TKPLTMAKIVPLLEEL 142
KP+ ++ +E L
Sbjct: 552 AKPVRKQELANAIEAL 567
>gi|308125497|ref|ZP_07663416.1| hybrid signal transduction histidine kinase J [Vibrio
parahaemolyticus K5030]
gi|308112027|gb|EFO49567.1| hybrid signal transduction histidine kinase J [Vibrio
parahaemolyticus K5030]
Length = 381
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 78/128 (60%), Gaps = 8/128 (6%)
Query: 17 SENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF 76
++NP ++P+ L+V+D + +R+ ++L+ +G KV VA +G+EA L R A F ++F
Sbjct: 246 NKNP---DKPW-VLIVEDTEVNQRVVRIMLEQLGLKVSVASHGEEAFQLCREHA-FDLIF 300
Query: 77 IDMEMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMA 133
+D +MPVMDG AT+ +R M I+ +T+ + +++ +AG++ KP+T A
Sbjct: 301 MDCQMPVMDGFIATEQIRDMNEWGAHVPIIALTANVVKEDQQRCFEAGMNEFVAKPVTKA 360
Query: 134 KIVPLLEE 141
++ + E+
Sbjct: 361 RLQQIFEQ 368
>gi|87308220|ref|ZP_01090362.1| ammonium/methylammonium permease [Blastopirellula marina DSM 3645]
gi|87289302|gb|EAQ81194.1| ammonium/methylammonium permease [Blastopirellula marina DSM 3645]
Length = 1259
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 46/139 (33%), Positives = 78/139 (56%), Gaps = 12/139 (8%)
Query: 9 SSSKKARISEN--PVSKNRPYFA--LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
S +K EN PV + P LVVDD+ + R + IL+S GF+V +AENG++AV+
Sbjct: 965 SPKQKVEKVENQQPVRERAPLEGAILVVDDNEINRIVAKEILQSEGFQVSLAENGRQAVE 1024
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK-------IVGVTSRNSETEREVF 117
++G +F +V +D EMP MDG AT+ +R + IV +T++ ++E
Sbjct: 1025 KIQSG-QFDLVLMDCEMPEMDGFAATRMIRNLAENGHPELANLPIVALTAQAVLGDKERC 1083
Query: 118 MQAGLDLCYTKPLTMAKIV 136
+ AG++ KP+ ++++
Sbjct: 1084 LAAGMNGYVMKPVNRSELI 1102
Score = 38.1 bits (87), Expect = 1.2, Method: Composition-based stats.
Identities = 30/119 (25%), Positives = 55/119 (46%), Gaps = 7/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK----FHIVFIDMEMPVMD 85
L VDD+ M ++ L+S G +V A NG+ A+ L AK + + +D MP +D
Sbjct: 843 LAVDDNHMNLQVIKEQLQSWGVEVSTAGNGRRALALLEDAAKRNVPYQLAILDHLMPELD 902
Query: 86 GIEATKAM--RAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
G+ + M E++++ +TS + + +C KP+ +++ L L
Sbjct: 903 GLRLAHLINDHQMLHETRLLMLTSYEHTIPHAELKKLEM-VCLPKPVRQTRLLDALVAL 960
>gi|291618164|ref|YP_003520906.1| RcsC [Pantoea ananatis LMG 20103]
gi|291153194|gb|ADD77778.1| RcsC [Pantoea ananatis LMG 20103]
Length = 949
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N L+VDD P+ R + S L ++G++V+ A++G +A+++ IV D+ MP
Sbjct: 822 NDDIMVLIVDDHPINRMLLSEQLGTLGYQVKTAQDGVDALNVLSRN-NIDIVLTDVNMPN 880
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + +VGVT+ E++ M AG+D C +KP+T+
Sbjct: 881 MDGYRLTQRLRQLGHVFPVVGVTANALAEEKQRCMDAGMDNCLSKPVTL 929
>gi|261416187|ref|YP_003249870.1| histidine kinase [Fibrobacter succinogenes subsp. succinogenes S85]
gi|385791053|ref|YP_005822176.1| sensor histidine kinase/response regulator [Fibrobacter succinogenes
subsp. succinogenes S85]
gi|261372643|gb|ACX75388.1| histidine kinase [Fibrobacter succinogenes subsp. succinogenes S85]
gi|302326964|gb|ADL26165.1| sensor histidine kinase/response regulator [Fibrobacter succinogenes
subsp. succinogenes S85]
Length = 1211
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 72/119 (60%), Gaps = 6/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG--AKFHIVFIDMEMPVMDGI 87
L+V+D+ + R I +L +GF V+ AE+G+ A+++ + ++ +DM+MPVMDG+
Sbjct: 1091 LLVEDNELNREIAQSVLGEMGFGVDCAEDGRVALNVLEKAKPGAYDLILMDMQMPVMDGL 1150
Query: 88 EATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
EAT+ +RAM+ + IV +T+ E +R+ + AG++ KP+ + K+ +L +
Sbjct: 1151 EATRRIRAMRDDYFKKVPIVAMTANAFEEDRKAALDAGMNEHVAKPIDVEKLKKVLRKF 1209
>gi|167033531|ref|YP_001668762.1| Hpt sensor hybrid histidine kinase [Pseudomonas putida GB-1]
gi|166860019|gb|ABY98426.1| Hpt sensor hybrid histidine kinase [Pseudomonas putida GB-1]
Length = 1090
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 6/116 (5%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
S + P LVVDD P + L ++G +V +AENG+ A+ ++ A+F +V D M
Sbjct: 841 SSSGPLNILVVDDYPANLLLLERQLNTLGHRVTLAENGEIALAHWQ-AARFDLVITDCSM 899
Query: 82 PVMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
PVMDG E T+ +RA++ E S+I+GVT+ ER + +G+D C KP+ +
Sbjct: 900 PVMDGHELTRRIRALEGERDLSASRIIGVTANAQAEERARCLASGMDECLFKPIGL 955
>gi|186685940|ref|YP_001869136.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
gi|186468392|gb|ACC84193.1| multi-sensor hybrid histidine kinase [Nostoc punctiforme PCC 73102]
Length = 1575
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 42/117 (35%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y L+VDD + + + S+GF+ + A NG+EA+ L++T H++F+DM MPVMDG
Sbjct: 1368 YRILIVDDREDNCDLLTQLFNSIGFETQAAANGQEAIALWQTWEP-HLIFMDMRMPVMDG 1426
Query: 87 IEATKAMRA-MKVESK-IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
EATK +RA +K ++ I+ +T+ + ER V + AG + KP I+ ++ +
Sbjct: 1427 YEATKQIRATLKGQATVIIALTASAFDEERFVVLSAGCNDFVRKPFREEVILNIISK 1483
>gi|288934293|ref|YP_003438352.1| integral membrane sensor hybrid histidine kinase [Klebsiella
variicola At-22]
gi|288889022|gb|ADC57340.1| integral membrane sensor hybrid histidine kinase [Klebsiella
variicola At-22]
Length = 946
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/130 (28%), Positives = 71/130 (54%), Gaps = 1/130 (0%)
Query: 3 IGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
+ A +S+ + + N LVVDD P+ RR+ + L S+G++ A +G +A
Sbjct: 799 VALASAENSRALMAPDAQIGNNDDMMILVVDDHPINRRLLADQLGSLGYQCVTANDGVDA 858
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
+++ + IV D+ MP MDG T+ +R + + ++GVT+ E++ +++G+
Sbjct: 859 LNVL-SKQHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVIGVTANALAEEKQRCLESGM 917
Query: 123 DLCYTKPLTM 132
D C +KP+T+
Sbjct: 918 DSCLSKPVTL 927
>gi|86144435|ref|ZP_01062767.1| hypothetical protein MED222_08498 [Vibrio sp. MED222]
gi|85837334|gb|EAQ55446.1| hypothetical protein MED222_08498 [Vibrio sp. MED222]
Length = 880
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M ++I S L+ G++ +A NG+EAVD+ GA+F + +D MPVMDGI A
Sbjct: 760 LIVEDNLMNQKIASFFLEQAGYEYLIASNGQEAVDVITQGAQFDAILMDCMMPVMDGITA 819
Query: 90 TKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ +R + + + I+ +T+ E + + +AG++ KP ++ L L
Sbjct: 820 TRVIREWETDQQTPPLPIIALTASVLEEDIKNCFEAGMNAYLPKPYKSHQLYDLFSSL 877
>gi|16264091|ref|NP_436883.1| histidine kinase [Sinorhizobium meliloti 1021]
gi|334319774|ref|YP_004556403.1| response regulator receiver protein [Sinorhizobium meliloti AK83]
gi|384533757|ref|YP_005716421.1| response regulator receiver protein [Sinorhizobium meliloti BL225C]
gi|15140216|emb|CAC48743.1| putative two-component response regulator [Sinorhizobium meliloti
1021]
gi|333815933|gb|AEG08600.1| response regulator receiver protein [Sinorhizobium meliloti BL225C]
gi|334097513|gb|AEG55523.1| response regulator receiver protein [Sinorhizobium meliloti AK83]
Length = 121
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 72/115 (62%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M R + S L GF V +AENG+ V+L + K ++ +DM +PVMDG EA
Sbjct: 5 LLVEDNEMNRDMLSRRLSRRGFDVLIAENGRAGVELAES-QKPDLILMDMSLPVMDGWEA 63
Query: 90 TKAMRAMKVESKI--VGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ ++A + S I + +T+ ++RE+ ++AG D +KP+ + ++V +E+L
Sbjct: 64 TRRIKANPLTSAIPVIALTAHAMASDREMALEAGCDDYDSKPVDLPQLVRKIEQL 118
>gi|386078636|ref|YP_005992161.1| integral membrane sensor hybrid histidine kinase RcsC [Pantoea
ananatis PA13]
gi|354987817|gb|AER31941.1| integral membrane sensor hybrid histidine kinase RcsC [Pantoea
ananatis PA13]
Length = 949
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N L+VDD P+ R + S L ++G++V+ A++G +A+++ IV D+ MP
Sbjct: 822 NDDIMVLIVDDHPINRMLLSEQLGTLGYQVKTAQDGVDALNVLSRN-NIDIVLTDVNMPN 880
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + +VGVT+ E++ M AG+D C +KP+T+
Sbjct: 881 MDGYRLTQRLRQLGHVFPVVGVTANALAEEKQRCMDAGMDNCLSKPVTL 929
>gi|281209323|gb|EFA83495.1| histidine kinase [Polysphondylium pallidum PN500]
Length = 1336
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/106 (33%), Positives = 66/106 (62%), Gaps = 8/106 (7%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK----FHIVFIDMEM 81
P LV +D+ M +R+ +L GFKV +A +GKEA+DL+ + + F + +D++M
Sbjct: 1224 PRKVLVAEDNTMNQRLIQKLLSKRGFKVSIANDGKEALDLYESEIEKQNPFDCILMDIQM 1283
Query: 82 PVMDGIEATKAMRAMKVE----SKIVGVTSRNSETEREVFMQAGLD 123
PV++G+E T A+R + + + I+ VT+ + ++E F++AG+D
Sbjct: 1284 PVLNGLETTSAIREREKQEGGHTPIIAVTAHAMKGDKEKFIEAGVD 1329
>gi|429094934|ref|ZP_19157443.1| Two-component sensor protein RcsC [Cronobacter dublinensis 1210]
gi|426739961|emb|CCJ83556.1| Two-component sensor protein RcsC [Cronobacter dublinensis 1210]
Length = 950
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/130 (29%), Positives = 69/130 (53%), Gaps = 1/130 (0%)
Query: 3 IGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
I E S + +N LVVDD P+ RR+ + L ++G++ A +G +A
Sbjct: 802 INVEVPGSEPTLPAASTSAEQNEDMMILVVDDHPINRRLLADQLGTLGYQCRTANDGVDA 861
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
+++ + IV D+ MP MDG T+ +R + + +VGVT+ E++ +++G+
Sbjct: 862 LNVL-SKTHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGM 920
Query: 123 DLCYTKPLTM 132
D C +KP+T+
Sbjct: 921 DSCLSKPVTL 930
>gi|406887265|gb|EKD34091.1| hypothetical protein ACD_75C02474G0004, partial [uncultured
bacterium]
Length = 1222
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/141 (33%), Positives = 75/141 (53%), Gaps = 6/141 (4%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
AEGA + I P + P LVVDD R + L+ VGF+++ A NG+EA++
Sbjct: 997 AEGAVTESSRVIGLEPGAG--PVRILVVDDKQDNRTLLRAFLEPVGFEIKEAVNGQEALE 1054
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAG 121
+F+ + H V +D+ MPVMDG EAT+ ++A + ++ VT+ E E + + AG
Sbjct: 1055 VFKKWSP-HAVLMDIRMPVMDGYEATRRIKATAKTGEAIPVIAVTANAFENEEKEALAAG 1113
Query: 122 LDLCYTKPLTMAKIVPLLEEL 142
+D KPL ++ + E
Sbjct: 1114 IDSYIRKPLRAQELFKTIGEF 1134
>gi|134300724|ref|YP_001114220.1| response regulator receiver protein [Desulfotomaculum reducens
MI-1]
gi|134053424|gb|ABO51395.1| response regulator receiver protein [Desulfotomaculum reducens
MI-1]
Length = 135
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/116 (32%), Positives = 68/116 (58%), Gaps = 1/116 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD +R + +++K G V A+NG EAVD R K ++F+D+ MP+M G+EA
Sbjct: 8 LIVDDQAGVRYLLEILVKESGHNVYTAQNGVEAVDKVRN-VKPDLIFMDVRMPIMGGLEA 66
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
++++ +++V +T+ ++E + MQ G +C +KP + +I LL + N
Sbjct: 67 LGKIKSLAPNTEVVMMTAYSAEDTATIAMQKGDFMCMSKPFDVDEIKNLLGYITTN 122
>gi|218676127|ref|YP_002394946.1| sensor protein [Vibrio splendidus LGP32]
gi|218324395|emb|CAV25783.1| putative sensor protein [Vibrio splendidus LGP32]
Length = 537
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/118 (32%), Positives = 67/118 (56%), Gaps = 5/118 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M ++I S L+ G++ +A NG+EAVD+ GA+F + +D MPVMDGI A
Sbjct: 417 LIVEDNLMNQKIASFFLEQAGYEYLIASNGQEAVDVITQGAQFDAILMDCMMPVMDGITA 476
Query: 90 TKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ +R + + + I+ +T+ E + + +AG++ KP ++ L L
Sbjct: 477 TRVIREWETDQQTPPLPIIALTASVLEEDIKNCFEAGMNAYLPKPYKSHQLYDLFSSL 534
>gi|395225615|ref|ZP_10404134.1| signal transduction histidine kinase [Thiovulum sp. ES]
gi|394446238|gb|EJF07076.1| signal transduction histidine kinase [Thiovulum sp. ES]
Length = 770
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 71/107 (66%), Gaps = 7/107 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D+ + +++ S +L+ + +VE+AENGKE VD F+T +F+++ +D+ MPVM+G+EA
Sbjct: 652 LVVEDNDINQQLISFMLEMLDIEVEIAENGKEGVDKFKTD-EFNLILMDINMPVMNGLEA 710
Query: 90 TKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ + + +S IV +T+ + ++E F+ G+D +KP+
Sbjct: 711 TQEIIDYEKDSASISHTPIVALTANAIKGDKERFISYGMDDYLSKPI 757
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/119 (32%), Positives = 63/119 (52%), Gaps = 7/119 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L V+D+ M R LK + K+ AENG+ +D+F+ + ++ D+ MP M+G+E
Sbjct: 17 LYVEDEEMTRMTFERSLKRMFGKIFQAENGRIGLDIFKKES-IDVILTDVNMPEMNGLEM 75
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQA---GLDLCYTKPLTMAKIVPLLEELQKN 145
+KA++ + IV ++ N + MQA G+D TKP+ M K LEE+ N
Sbjct: 76 SKAIKEINPRVPIVISSAYNDSS---FLMQAIDIGIDHYITKPVDMKKFRLRLEEVAIN 131
>gi|27365916|ref|NP_761444.1| signal transduction histidine kinase [Vibrio vulnificus CMCP6]
gi|27362065|gb|AAO10971.1| Signal transduction histidine kinase [Vibrio vulnificus CMCP6]
Length = 574
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/136 (29%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 10 SSKKARISENPVS--KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFR 67
S K R+S++ + ++R LVV+D + + ++L +G V +A NG EA++
Sbjct: 437 SRKLIRLSQDGTTNKRDRALNVLVVEDTHSNQMVIQLLLNKLGHNVFIANNGSEAIEFIE 496
Query: 68 TGAK-FHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCY 126
+ + +VF+D+ MPVMDG+ ATK +RA E I+ +T+ ++++ + G+D
Sbjct: 497 SNTESLDVVFMDVSMPVMDGLTATKILRAKGFEVPIIALTAHALASDKQNCLDVGMDSFV 556
Query: 127 TKPLTMAKIVPLLEEL 142
KP+ ++ +E L
Sbjct: 557 AKPVRKQELANAIEAL 572
>gi|398799249|ref|ZP_10558541.1| signal transduction histidine kinase [Pantoea sp. GM01]
gi|398099117|gb|EJL89389.1| signal transduction histidine kinase [Pantoea sp. GM01]
Length = 950
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/110 (32%), Positives = 65/110 (59%), Gaps = 1/110 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD P+ R + S L +VG++ + A++G +A+++ IV D+ MP MDG
Sbjct: 829 LIVDDHPINRMLLSEQLGTVGYQTKTAQDGVDALNVLSRN-HIDIVLSDVNMPNMDGYRL 887
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
T+ +R + ++GVT+ E++ M+AG+D C +KP+T+ ++ L
Sbjct: 888 TQRLRQLGHTFPVIGVTANALAEEKQRCMEAGMDNCLSKPVTLDVLISTL 937
>gi|291568068|dbj|BAI90340.1| two-component hybrid sensor and regulator [Arthrospira platensis
NIES-39]
Length = 1383
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P SK P L+VDD +R + SM + G++VE A +GKEA + ++G IVF D+
Sbjct: 1234 PASKTEPT-VLIVDDSITVRSLLSMTFEKSGYRVEEARDGKEAWEKLKSGLPCDIVFCDI 1292
Query: 80 EMPVMDGIEATKAM-RAMKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKP 129
EMP MDG+E M + ++E I +TSR ++ R++ Q G +TKP
Sbjct: 1293 EMPRMDGLELLSGMQKDPQLEGLPIAMLTSRGADRHRQMAYQLGARGYFTKP 1344
>gi|334129574|ref|ZP_08503378.1| Sensor protein [Methyloversatilis universalis FAM5]
gi|333445259|gb|EGK73201.1| Sensor protein [Methyloversatilis universalis FAM5]
Length = 870
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 13/125 (10%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+P+ + + L+ G+KV VA NG+EA+DL + + F +V +D++MPVM GIEA
Sbjct: 593 LLAEDNPVNQLVAVRTLERAGYKVTVANNGQEALDLIDSES-FDVVLMDVQMPVMGGIEA 651
Query: 90 TKAMRAMKVESK------------IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVP 137
T+A+RA + I+ +T+ + +RE+ + G+D +KP+ ++
Sbjct: 652 TRAIRAREQRRSWVVDTDHVQHLPIIAMTANAMKGDRELCLDEGMDDYVSKPVKAEDLLA 711
Query: 138 LLEEL 142
LE +
Sbjct: 712 ALERV 716
>gi|261211606|ref|ZP_05925893.1| signal transduction histidine kinase [Vibrio sp. RC341]
gi|260838956|gb|EEX65588.1| signal transduction histidine kinase [Vibrio sp. RC341]
Length = 569
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 36/132 (27%), Positives = 72/132 (54%)
Query: 11 SKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA 70
S + I P+S + LVV+D + + ++L +G V +AENG +A+++
Sbjct: 436 SIQEHIHLQPLSGINNHHILVVEDTKTNQTVIQLLLTKMGCSVTIAENGLQAIEILNKSP 495
Query: 71 KFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
+F +V +D+ MPVMDG+ ATK +R E I+ +T+ + ++++ + G++ KP+
Sbjct: 496 EFDLVLMDISMPVMDGLSATKIIRGFNQEIPIIALTAHTAGSDKQNCIDVGMNDIVLKPI 555
Query: 131 TMAKIVPLLEEL 142
I+ +++
Sbjct: 556 RSKDIMDVVKRF 567
>gi|260776063|ref|ZP_05884958.1| hypothetical protein VIC_001447 [Vibrio coralliilyticus ATCC
BAA-450]
gi|260607286|gb|EEX33551.1| hypothetical protein VIC_001447 [Vibrio coralliilyticus ATCC
BAA-450]
Length = 563
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 64/112 (57%), Gaps = 1/112 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD M + I + +LK + ++A NG EA+ +G+ + ++F+D MP MDG EA
Sbjct: 451 LVVDDIRMNQVIINQMLKKLSITPDIASNGLEAIKA-ASGSSYDLIFMDCRMPEMDGFEA 509
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
T +R + I+ +T+ + ERE +Q G+D TKP T + +LE+
Sbjct: 510 TSYLREQEFSQPIIALTAGTTLEEREKCIQCGMDDILTKPYTAKDLRLMLEK 561
>gi|311278813|ref|YP_003941044.1| histidine kinase [Enterobacter cloacae SCF1]
gi|308748008|gb|ADO47760.1| histidine kinase [Enterobacter cloacae SCF1]
Length = 949
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/124 (31%), Positives = 69/124 (55%), Gaps = 1/124 (0%)
Query: 9 SSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT 68
S+S E+ N LVVDD P+ RR+ + L S+G++ + A +G +A+++
Sbjct: 808 SASAALPPPESATMANDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVLSK 867
Query: 69 GAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTK 128
A IV D+ MP MDG T+ +R + ++GVT+ E++ +++G+D C +K
Sbjct: 868 NA-IDIVLSDVNMPNMDGYRLTQRIRQQGLTLPVIGVTANALAEEKQRCLESGMDSCLSK 926
Query: 129 PLTM 132
P+T+
Sbjct: 927 PVTL 930
>gi|116696021|ref|YP_841597.1| signal transduction histidine kinase [Ralstonia eutropha H16]
gi|113530520|emb|CAJ96867.1| signal transduction histidine kinase containing a receiver domain
(hybrid) [Ralstonia eutropha H16]
Length = 1106
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D P+ + + L+++G KV++A +G EA+ L +G + +V D++MP MDG
Sbjct: 876 LLVEDHPINQVVMREQLENLGQKVDLAGDGPEAL-LMASGRHYDLVLTDLQMPGMDGFTL 934
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
+ +R + + IV VT+ E QAG+D C TKP+ + + LLE+L
Sbjct: 935 ARCLRDAGLATPIVAVTASVGPDVSERCQQAGIDRCLTKPVGLGTLRKLLEDL 987
>gi|83941860|ref|ZP_00954322.1| sensor histidine kinase/response regulator [Sulfitobacter sp.
EE-36]
gi|83847680|gb|EAP85555.1| sensor histidine kinase/response regulator [Sulfitobacter sp.
EE-36]
Length = 713
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 49/150 (32%), Positives = 77/150 (51%), Gaps = 20/150 (13%)
Query: 15 RISENPVS----------------KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAEN 58
RI +NP+S RP L +D+ R + +L+ + +++A N
Sbjct: 554 RIMKNPISVTELLAEVSTMQPVPVGTRPMRVLAAEDNKTNRLVLRKMLQRLNIDLQLATN 613
Query: 59 GKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMK---VESKIVGVTSRNSETERE 115
G+EAV LF T + +VF+D+ MP M+G +A A+RA++ IV +T+ + E+E
Sbjct: 614 GQEAVALFET-FRPDLVFMDISMPKMNGKDAAAAIRALEDGASSCPIVALTAHAIQDEKE 672
Query: 116 VFMQAGLDLCYTKPLTMAKIVPLLEELQKN 145
+ AGLD TKPL A++V LL N
Sbjct: 673 RILAAGLDHFLTKPLRKAELVALLNRYCPN 702
>gi|87307297|ref|ZP_01089442.1| sensory transduction histidine kinase [Blastopirellula marina DSM
3645]
gi|87290037|gb|EAQ81926.1| sensory transduction histidine kinase [Blastopirellula marina DSM
3645]
Length = 1138
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/105 (36%), Positives = 58/105 (55%), Gaps = 4/105 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGK----EAVDLFRTGAKFHIVFIDMEMPVMD 85
L V+D P R++ S IL+ G V +AENGK A+ +R G F ++ +DM+MPVMD
Sbjct: 1006 LFVEDGPDNRKLISFILRKAGADVTIAENGKLGLEAALHAWRAGTPFDVILMDMQMPVMD 1065
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
G AT +R +I+ +T+ + ++AG D TKP+
Sbjct: 1066 GYTATAQLRDAGYTGQIIALTAHAMRGDINKCLEAGCDAYLTKPI 1110
>gi|451947129|ref|YP_007467724.1| histidine kinase [Desulfocapsa sulfexigens DSM 10523]
gi|451906477|gb|AGF78071.1| histidine kinase [Desulfocapsa sulfexigens DSM 10523]
Length = 640
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 10/138 (7%)
Query: 8 ASSSKKARISENPVSKN----RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAV 63
A S K + +P+ + P L+VDD+ R + + L++ F + AENG+EAV
Sbjct: 371 ALSDPKPAVERSPLPASCNILPPARILIVDDNEDNRNLLCLYLRNTPFILVTAENGEEAV 430
Query: 64 DLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFM 118
++F+ + F +VF+D+EMP+MDG EAT+ +R + E K IV +T+ R+ M
Sbjct: 431 NVFKR-SPFDLVFMDIEMPLMDGYEATRRLRLWEREQKLDPTPIVALTAHAFVRFRKKCM 489
Query: 119 QAGLDLCYTKPLTMAKIV 136
AG TKP+ A ++
Sbjct: 490 DAGCSDYLTKPVRRATLI 507
Score = 37.4 bits (85), Expect = 2.0, Method: Composition-based stats.
Identities = 30/109 (27%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD + + S IL+ G+ V N ++A+ + I+ +D+ MP MDG
Sbjct: 10 LVVDDHKVNLILLSRILEEEGYTVITGNNSRDALQHLHNQSP-DIILLDVMMPGMDGFSL 68
Query: 90 TKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
+ ++ K S I+ +TSR+ + + AG + TKP +++
Sbjct: 69 CRKLKKDKKFSDIPIIFLTSRSQKEDIVEGFNAGGNDYITKPFNRQELL 117
>gi|239627656|ref|ZP_04670687.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239517802|gb|EEQ57668.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 891
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 74/121 (61%), Gaps = 9/121 (7%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH--IVFIDMEMPVMDGI 87
L+ +D+ + R I +L+ G +VE A +G+EAV LFR A H V +D+ MPVM+G+
Sbjct: 772 LLAEDNELNREIAKTLLEMYGMEVEAARDGQEAVALFRDNAPDHYQAVLMDIRMPVMNGM 831
Query: 88 EATKAMRAMKV----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
EAT+++R ++ + I+ +T+ E +R M+AG+ KPL + K+V L+EL+
Sbjct: 832 EATRSIRGLERGDAGQIPILAMTANAFEEDRMAAMEAGMTGYLVKPLDI-KVV--LDELK 888
Query: 144 K 144
K
Sbjct: 889 K 889
Score = 47.4 bits (111), Expect = 0.002, Method: Composition-based stats.
Identities = 33/106 (31%), Positives = 55/106 (51%), Gaps = 5/106 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD----LFRTGAKFHIVFIDMEMPVMD 85
LV DDDP++ + ILK G ++G +AV+ R G + I ID +MP MD
Sbjct: 633 LVADDDPVVGCQCTEILKDAGANSVWVDSGFKAVEEVERQLRHGRYYDIALIDWQMPDMD 692
Query: 86 GIEATKAMRAM-KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
G+E + +R + ++ I+ +++ + E +AG+D KPL
Sbjct: 693 GVETARRIRRLVGPDTTIIMISAYDWSFIEEDARKAGVDCFVPKPL 738
>gi|154147903|ref|YP_001406226.1| sensor histidine kinase/response regulator [Campylobacter hominis
ATCC BAA-381]
gi|153803912|gb|ABS50919.1| sensor histidine kinase/response regulator [Campylobacter hominis
ATCC BAA-381]
Length = 1385
Score = 70.1 bits (170), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/128 (35%), Positives = 72/128 (56%), Gaps = 8/128 (6%)
Query: 25 RPYFA--LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
R Y A L+ +D+ + +++ L S + + ENG A++ ++G F +VF+D+ MP
Sbjct: 1036 RTYNANILIAEDNEINQKLMKHTLSSFKANLTIVENGLLALEARKSG-DFDLVFMDISMP 1094
Query: 83 VMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVP 137
VMDGIEATK ++ + E+ IV VT+ + +RE FM GLD TKP+ +
Sbjct: 1095 VMDGIEATKQIKQYEQENNLKHIPIVAVTANALKGDRERFMSQGLDEYCTKPIKKDILAS 1154
Query: 138 LLEELQKN 145
+L+ KN
Sbjct: 1155 MLDMFIKN 1162
>gi|153870045|ref|ZP_01999526.1| two-component system sensor histidine kinase/response regulator
[Beggiatoa sp. PS]
gi|152073490|gb|EDN70475.1| two-component system sensor histidine kinase/response regulator
[Beggiatoa sp. PS]
Length = 1258
Score = 70.1 bits (170), Expect = 2e-10, Method: Composition-based stats.
Identities = 43/134 (32%), Positives = 71/134 (52%), Gaps = 10/134 (7%)
Query: 17 SENPVSK------NRP-YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG 69
SE P + N+P Y L+VDD R++ +L GF++ A NG+EA+D+F
Sbjct: 1034 SEQPTQQVIALEPNQPRYRLLIVDDKWENRQLLIQLLNPFGFELREATNGQEAIDIFEHW 1093
Query: 70 AKFHIVFIDMEMPVMDGIEATKAMRA--MKVESKIVGVTSRNSETEREVFMQAGLDLCYT 127
H++++D+ MP+MDG++AT+ ++A I+ +T+ E ERE + G D
Sbjct: 1094 QP-HLIWMDIRMPIMDGLQATQQIKAKPQGQSVAIIALTASVLEEERENILAVGCDDFLH 1152
Query: 128 KPLTMAKIVPLLEE 141
KP I L+ +
Sbjct: 1153 KPFKEGTIFDLMHQ 1166
>gi|365108472|ref|ZP_09336331.1| sensor protein rcsC [Citrobacter freundii 4_7_47CFAA]
gi|363640366|gb|EHL79837.1| sensor protein rcsC [Citrobacter freundii 4_7_47CFAA]
Length = 948
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 3 IGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
+G+E S++ A + + N LVVDD P+ RR+ + L S+G++ + A +G +A
Sbjct: 803 LGSEDLSTALPA--PDKAGATNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDA 860
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
+++ + IV D+ MP MDG T+ +R + + +VGVT+ E++ +++G+
Sbjct: 861 LNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGM 919
Query: 123 DLCYTKPLTM 132
D C +KP+T+
Sbjct: 920 DSCLSKPVTL 929
>gi|71909483|ref|YP_287070.1| PAS [Dechloromonas aromatica RCB]
gi|71849104|gb|AAZ48600.1| PAS protein [Dechloromonas aromatica RCB]
Length = 853
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 66/105 (62%), Gaps = 3/105 (2%)
Query: 28 FALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGI 87
L+V+DDP+ R + M+++ VG ++VAE+G EA+D + + +V +DM+MP MDG+
Sbjct: 731 LVLLVEDDPINREVAQMMVEEVGLAIDVAEDGCEALDKV-SQTNYALVLMDMQMPRMDGL 789
Query: 88 EATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
EAT+ +R ++ I+ +T+ +RE M AG++ +KP+
Sbjct: 790 EATRRIRLLENRKNLPILAMTANAFAEDRERCMAAGMNDFVSKPV 834
>gi|32473151|ref|NP_866145.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1]
gi|32397830|emb|CAD73831.1| sensory transduction histidine kinase [Rhodopirellula baltica SH 1]
Length = 1637
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 62/111 (55%), Gaps = 4/111 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
L+ DD +R + LK G +VEVAENG++AVD+ R G F + +DM+MP +D
Sbjct: 1518 LIADDMRDVRFVAQHFLKKAGCEVEVAENGRQAVDMVVAASRDGKPFELCLMDMQMPELD 1577
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
G+ A + +R +E ++ +T+ + R + G D +KPL + +++
Sbjct: 1578 GLGAVRELRQRGIELPVIALTADAMKGTRRRLITEGFDEYLSKPLKVNRLL 1628
>gi|237732270|ref|ZP_04562751.1| sensor protein RcsC [Citrobacter sp. 30_2]
gi|226907809|gb|EEH93727.1| sensor protein RcsC [Citrobacter sp. 30_2]
Length = 948
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/130 (30%), Positives = 75/130 (57%), Gaps = 3/130 (2%)
Query: 3 IGAEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEA 62
+G+E S++ A + + N LVVDD P+ RR+ + L S+G++ + A +G +A
Sbjct: 803 LGSEDLSTALPA--PDKAGATNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDA 860
Query: 63 VDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGL 122
+++ + IV D+ MP MDG T+ +R + + +VGVT+ E++ +++G+
Sbjct: 861 LNVL-SKNHIDIVLSDVNMPNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGM 919
Query: 123 DLCYTKPLTM 132
D C +KP+T+
Sbjct: 920 DSCLSKPVTL 929
>gi|295107410|emb|CBL04953.1| Signal transduction histidine kinase [Gordonibacter pamelaeae
7-10-1-b]
Length = 727
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 45/135 (33%), Positives = 77/135 (57%), Gaps = 10/135 (7%)
Query: 17 SENPVSKNRPYF---ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-- 71
+ENP + LVV+D+ + I + +++ +G V+ A NG++AV+ +
Sbjct: 588 AENPCPPTEVHLEGRVLVVEDNLLNLEIATELIQGLGADVDQAINGQKAVNAMANTPEGY 647
Query: 72 FHIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQAGLDLCY 126
+ +VF+DM+MPVM G+EAT+A+R + IV +T+ +RE + AG+D
Sbjct: 648 YDLVFMDMQMPVMGGVEATRAIREQERTGGRKPVPIVAMTANAFNEDRERALAAGMDGFM 707
Query: 127 TKPLTMAKIVPLLEE 141
TKP+ +AK+ +LEE
Sbjct: 708 TKPIDLAKLKRILEE 722
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/111 (30%), Positives = 56/111 (50%), Gaps = 5/111 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL----FRTGAKFHIVFIDMEMPVMD 85
L+VDDDP + +IL +G + A +G +AV L G + + +D MP MD
Sbjct: 464 LLVDDDPDVIEGTLLILDELGLCGDAASSGFDAVPLVERAHHEGHDYRFIIVDWVMPGMD 523
Query: 86 GIEATKAMRAMKVESK-IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
GIE + +R+ +S IV +T+ + E AG+ +KPL +++
Sbjct: 524 GIETIRRIRSEVGDSTPIVLLTAYDWHEIEEEARAAGVSAFVSKPLFKSRL 574
>gi|167625694|ref|YP_001675988.1| PAS/PAC sensor-containing hybrid histidine kinase [Shewanella
halifaxensis HAW-EB4]
gi|167355716|gb|ABZ78329.1| PAS/PAC sensor hybrid histidine kinase [Shewanella halifaxensis
HAW-EB4]
Length = 1203
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 28 FALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGI 87
+ L+V+D+ + +++ + +LKS G+ V+VAENG+ A+D+ ++ V +D++MPVMDG+
Sbjct: 1080 YVLLVEDNFINQQVATELLKSAGYTVDVAENGQIALDMI-DKTQYDAVLMDIQMPVMDGL 1138
Query: 88 EATKAMRAMKV--ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
ATK +R E ++ +T+ +RE + AG++ TKP+ + ++ L
Sbjct: 1139 TATKELRKRYSTEELPVIAMTAHAMSGDREKSLAAGMNAHITKPIVLTELFETL 1192
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 55/109 (50%), Gaps = 9/109 (8%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK-FHIVFIDMEMPVMDGI 87
LV+DD+P +I+S +L+ F V+ A +G E L++ G ++ +D MP MDGI
Sbjct: 938 TLVIDDNPTALQIYSSVLRDFHFNVDTAASGPEG--LYKLGKNPVDLLLLDWMMPEMDGI 995
Query: 88 EATKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPL 130
E K + AM + + I+ +T+ +E + QA + KP
Sbjct: 996 EVIKQIDAMVADGRLEKRPIIIMMTAYTAEPMHKDVEQANVYALLQKPF 1044
>gi|308187582|ref|YP_003931713.1| two component sensor kinase/response regulator protein RcsC
[Pantoea vagans C9-1]
gi|308058092|gb|ADO10264.1| two component sensor kinase/response regulator protein RcsC
[Pantoea vagans C9-1]
Length = 950
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N L+VDD P+ R + S L ++G++V+ A++G +A+++ + IV D+ MP
Sbjct: 823 NDDIMVLIVDDHPINRMLLSEQLGTLGYQVKTAQDGVDALNVLSRN-EIDIVLTDVNMPN 881
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + +VGVT+ E++ M AG+D C +KP+T+
Sbjct: 882 MDGYRLTQRLRQLGHLFPVVGVTANALAEEKQRCMDAGMDNCLSKPVTL 930
>gi|269102668|ref|ZP_06155365.1| hypothetical protein VDA_002094 [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268162566|gb|EEZ41062.1| hypothetical protein VDA_002094 [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 693
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/121 (29%), Positives = 74/121 (61%), Gaps = 1/121 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG-AKFHIVFIDMEMP 82
NR L+ +D + + ++L+ G KV + NG+EA++ R G KF +VF+D+ MP
Sbjct: 568 NRCLNILLAEDSITNQMVARLMLEKRGHKVHIVNNGEEALEAIRHGHKKFDLVFMDVSMP 627
Query: 83 VMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
++DG+EAT+ +R+ +E I+ +T+ + ++ + +AG++ KP+ +++ +L++
Sbjct: 628 LVDGVEATRIVRSEGIEIPIIALTANVMKQDQIEYHEAGMNEFLPKPIRGSELTSILQKY 687
Query: 143 Q 143
Q
Sbjct: 688 Q 688
>gi|170726314|ref|YP_001760340.1| multi-sensor hybrid histidine kinase [Shewanella woodyi ATCC 51908]
gi|169811661|gb|ACA86245.1| multi-sensor hybrid histidine kinase [Shewanella woodyi ATCC 51908]
Length = 1713
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSV--GFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGI 87
L+VDDD +R +++ K + GF+VE+A NGKEAV+ F +V +D MP MDG
Sbjct: 1595 LIVDDD--MRNTYALSKKLIEYGFEVEMAHNGKEAVEQLTEDKSFELVLMDTMMPEMDGY 1652
Query: 88 EATKAMRAMKVESK--IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
+ATK +R M+ + I+ +T++ +RE +Q+G TKP+ K++ ++
Sbjct: 1653 QATKRIREMEHYKQVPIIALTAKTMPEDREKSLQSGASEYLTKPIDFEKLLSIM 1706
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/115 (22%), Positives = 62/115 (53%), Gaps = 3/115 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L++DDDP+ +I + G++ VA +G+ + L + I+ +D+ +P +DG +
Sbjct: 1326 LIIDDDPVFAKILRDHARECGYQSLVAGDGRMGIFLAQEYQPNGII-LDIMLPDIDGHQV 1384
Query: 90 TKAMR-AMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
+ ++ ++K V + S ++E + +Q + L TKP++ ++ + +E++
Sbjct: 1385 LEQLKFSLKTRHIPVEIISAHNEDKNAALVQGAIGL-QTKPVSQETLLSVFDEIK 1438
>gi|433772783|ref|YP_007303250.1| signal transduction histidine kinase [Mesorhizobium australicum
WSM2073]
gi|433664798|gb|AGB43874.1| signal transduction histidine kinase [Mesorhizobium australicum
WSM2073]
Length = 779
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 78/138 (56%), Gaps = 13/138 (9%)
Query: 14 ARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFH 73
A + E+ + N P L+ +D+ + + + IL +G +A NG+ AV+++R+ H
Sbjct: 638 AAVPESNAAPNSPIDILIAEDNDVNQMVFGQILNGLGLSYRIAGNGRTAVEMYRS---LH 694
Query: 74 --IVFIDMEMPVMDGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYT 127
+V +D+ MP M+G EAT+A+RA++ S I+GVT+ + +R+ ++AG+D
Sbjct: 695 PRLVLMDVSMPEMNGYEATRAIRAIEASSGGHIPIIGVTAHALKGDRDKCIEAGMDDYLP 754
Query: 128 KPLT----MAKIVPLLEE 141
KP++ AKI L E
Sbjct: 755 KPVSPDRLGAKIGTWLSE 772
Score = 41.2 bits (95), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 31/106 (29%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF----RTGAKFHIVFIDMEMPVMD 85
LV+DD+P+ R I L+S F AE+G + + GA + +D +MP M+
Sbjct: 480 LVIDDNPVNREILLEQLRSWSFDCAAAESGAVGLAFLDRACQLGASVDCIILDYQMPGMN 539
Query: 86 GIEATKAMRAMKVESKI--VGVTSRNSETEREVFMQAGLDLCYTKP 129
G + +A+ A S I V +TS + ++ + G+ TKP
Sbjct: 540 GADVARAIAADSRLSTIPVVILTSVDQVDFGKMIIDFGISAHLTKP 585
>gi|386016490|ref|YP_005934777.1| sensor kinase protein RcsC [Pantoea ananatis AJ13355]
gi|327394559|dbj|BAK11981.1| sensor kinase protein RcsC [Pantoea ananatis AJ13355]
Length = 880
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 63/109 (57%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N L+VDD P+ R + S L ++G++V+ A++G +A+++ IV D+ MP
Sbjct: 753 NDDIMVLIVDDHPINRMLLSEQLGTLGYQVKTAQDGVDALNVLSRN-NIDIVLTDVNMPN 811
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + +VGVT+ E++ M AG+D C +KP+T+
Sbjct: 812 MDGYRLTQRLRQLGHVFPVVGVTANALAEEKQRCMDAGMDNCLSKPVTL 860
>gi|288940787|ref|YP_003443027.1| multi-sensor hybrid histidine kinase [Allochromatium vinosum DSM 180]
gi|288896159|gb|ADC61995.1| multi-sensor hybrid histidine kinase [Allochromatium vinosum DSM 180]
Length = 1377
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/103 (33%), Positives = 67/103 (65%), Gaps = 3/103 (2%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+P+ R + +L SVG +VE AENG+ A+++ G + ++ +D++MP+MDG+ A
Sbjct: 1015 LLAEDNPINREVALELLNSVGLRVETAENGQVALEMAADG-DYDLILMDVQMPLMDGLSA 1073
Query: 90 TKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+A+RA+ + I+ +T+ E +R ++AG++ KP+
Sbjct: 1074 TRAIRALPNWCDKPILALTANAFEEDRRACLEAGMNDFVPKPV 1116
>gi|429204437|ref|ZP_19195725.1| DNA-binding response regulator [Lactobacillus saerimneri 30a]
gi|428147221|gb|EKW99449.1| DNA-binding response regulator [Lactobacillus saerimneri 30a]
Length = 227
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 70/115 (60%), Gaps = 1/115 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ +D+ + R+ +M ++S+ + V+VA NG+EAVDL T A + + +D+ MPV DGI A
Sbjct: 4 LLAEDEEQLARVVTMAIQSLNYTVDVAHNGQEAVDLAATNA-YDAIILDIMMPVKDGITA 62
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
K +RA + I+ +T++ +R + + G D TKP ++ +++ L +++
Sbjct: 63 LKEIRARGDRTYIMMLTAKAEIDDRVLGLDTGADDYLTKPFSLKELLARLRSIER 117
>gi|423121349|ref|ZP_17109033.1| sensor protein rcsC [Klebsiella oxytoca 10-5246]
gi|376394184|gb|EHT06835.1| sensor protein rcsC [Klebsiella oxytoca 10-5246]
Length = 951
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/115 (32%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFI 77
E V+ N LVVDD P+ RR+ + L S+G++ A +G +A+ + + IV
Sbjct: 816 ETQVASNDDMMILVVDDHPINRRLLADQLGSLGYQCVTANDGVDALGVL-SKQHIDIVLS 874
Query: 78 DMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+ MP MDG T+ +R + + ++GVT+ E++ +++G+D C +KP+T+
Sbjct: 875 DVNMPNMDGYRLTQRIRELGMTLPVIGVTANALAEEKQRCLESGMDNCLSKPVTL 929
>gi|386816143|ref|ZP_10103361.1| two component transcriptional regulator, winged helix family
[Thiothrix nivea DSM 5205]
gi|386420719|gb|EIJ34554.1| two component transcriptional regulator, winged helix family
[Thiothrix nivea DSM 5205]
Length = 231
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 66/107 (61%), Gaps = 2/107 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+ DDDP IR + S L+ +V AE+G++A++LFRT ++ +D+ MP +DG+E
Sbjct: 6 LIADDDPHIRDVISFALEKANMQVTQAEDGRQALELFRTHPT-DLIVLDINMPELDGLEV 64
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
+ +R E+ I+ ++SR+ E +R + ++ G D TKP + ++V
Sbjct: 65 CREIRKFS-EAPILFLSSRDDEIDRILGLEIGGDDYVTKPFSPRELV 110
>gi|317492549|ref|ZP_07950976.1| response regulator receiver domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
gi|316919299|gb|EFV40631.1| response regulator receiver domain-containing protein
[Enterobacteriaceae bacterium 9_2_54FAA]
Length = 952
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 46/117 (39%), Positives = 65/117 (55%), Gaps = 13/117 (11%)
Query: 30 LVVDDDPMIRRIHSMILKSVGF-KVEVAENGKEAVDLFRTGAKFH--IVFIDMEMPVMDG 86
L+VDD P+ RR+ + L S+G+ V A +G +A+ AK H IV D+ MP MDG
Sbjct: 830 LIVDDHPINRRLLADQLISLGYHSVSTASDGLDALGAL---AKLHADIVLTDVNMPNMDG 886
Query: 87 IEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
+ T +R + I+GVT+ ERE +Q G+D C +KP+T LEELQ
Sbjct: 887 YQLTARLRQQGRTAPIIGVTANALAEERERCIQVGMDSCLSKPVT-------LEELQ 936
>gi|295101501|emb|CBK99046.1| Signal transduction histidine kinase [Faecalibacterium prausnitzii
L2-6]
Length = 978
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 75/121 (61%), Gaps = 9/121 (7%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA--KFHIVFIDMEMPVMDGI 87
L+V+D+ + R I IL+ GF+V+ AENG+ AV+ T A + +V +D++MPVMDG
Sbjct: 859 LLVEDNELNREIAQEILREYGFRVDTAENGEVAVEKVSTAAPGSYDLVLMDVQMPVMDGY 918
Query: 88 EATKAMRAM----KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQ 143
AT+ +RA+ + + I+ +T+ + +R +++G++ +KP+ + +V +EL+
Sbjct: 919 TATRKIRALDDPARAKLPILAMTANAFDEDRRNALESGMNGFLSKPIVIGDLV---QELR 975
Query: 144 K 144
K
Sbjct: 976 K 976
>gi|359782103|ref|ZP_09285325.1| two-component system sensor-response regulator hybrid protein
[Pseudomonas psychrotolerans L19]
gi|359369896|gb|EHK70465.1| two-component system sensor-response regulator hybrid protein
[Pseudomonas psychrotolerans L19]
Length = 1620
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 70/115 (60%), Gaps = 2/115 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVV+D+ + R++ + +L + G +VE+AE G + V+ +G +V +DM+MP +DG+EA
Sbjct: 1288 LVVEDNALNRQVAAELLLAQGAQVELAEGGLQGVERVLSGGPLDVVIMDMQMPDIDGLEA 1347
Query: 90 TKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+ +RA + I+ +T+ S T+R+ + AG+D KP+ + +V L L
Sbjct: 1348 TRRIRADQRFRTLPILAMTANASHTDRDACLAAGMDDHIGKPIDLELLVARLRRL 1402
Score = 38.9 bits (89), Expect = 0.66, Method: Composition-based stats.
Identities = 31/119 (26%), Positives = 62/119 (52%), Gaps = 8/119 (6%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAK----FHIVFIDMEMPVMD 85
L+ DD+ ++ + L ++G++V++ +G A+ + + V +D MP D
Sbjct: 1141 LLADDNTLVGEVLVETLAALGWQVDLVTSGAAALARVAQAQQQAQPYEAVLMDWRMPDGD 1200
Query: 86 GIEATKAMRAMKVES--KIVGVT--SRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
G+ A + +R + ++ K++ +T R+ TE + A D TKP+T A+IV ++E
Sbjct: 1201 GLLAARQLRERQADNRPKVIMLTGFGRDFLTEAQQSDDAPFDDYLTKPVTPAQIVEVVE 1259
>gi|254420388|ref|ZP_05034112.1| Bacterial signalling protein N terminal repeat [Brevundimonas sp.
BAL3]
gi|196186565|gb|EDX81541.1| Bacterial signalling protein N terminal repeat [Brevundimonas sp.
BAL3]
Length = 746
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/122 (32%), Positives = 64/122 (52%), Gaps = 6/122 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP LV DD P RR+ +IL + + +AENG EA++ FR G F +V +DM+MP+M
Sbjct: 614 RPVRVLVADDHPTNRRVLELILSQISSVISMAENGAEALEAFRAG-DFDLVLMDMQMPIM 672
Query: 85 DGIEATKAMRAMKV-----ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
DG+ AT+ +R + + IV +T+ AG D KP +++ ++
Sbjct: 673 DGLTATQEIRLHEATAGGRRTPIVMLTANAMPEHVAAGRAAGADHHLAKPFNTTELLAIV 732
Query: 140 EE 141
+
Sbjct: 733 AD 734
>gi|167768191|ref|ZP_02440244.1| hypothetical protein CLOSS21_02747 [Clostridium sp. SS2/1]
gi|167709715|gb|EDS20294.1| response regulator receiver domain protein [Clostridium sp. SS2/1]
gi|291560213|emb|CBL39013.1| Signal transduction histidine kinase [butyrate-producing bacterium
SSC/2]
Length = 982
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA--KFHIVFIDMEMPVMDGI 87
L+V+D+ + I IL GF+V+ AE+G EAV+ R A + +V +D++MPVM+G
Sbjct: 862 LLVEDNELNSEIAMAILNEYGFQVDTAEDGAEAVEKIRNSAPGDYELVLMDIQMPVMNGY 921
Query: 88 EATKAMRAMK----VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
EA K +RA+ E I+ +T+ + +R+ ++ G+D +KP+ + +++ L+
Sbjct: 922 EAAKQIRALDDPALAEITILAMTANAFDEDRKKALECGMDGFLSKPIVIEELIHTLQ 978
Score = 55.5 bits (132), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT----GAKFHIVFIDMEMPVM 84
ALV+DDD + +L VG + E +GKEAV R G FH ID +P M
Sbjct: 719 ALVIDDDFNTCDSVTKMLAKVGMRSEWTLSGKEAVLRARQSIELGDAFHAYIIDWRLPDM 778
Query: 85 DGIEATKAMRAMKVESKIVGVTSRN-SETEREVFMQAGLDLCYTKPLTMAKI 135
+GIE T+ +R++ ++ I+ +T+ + SE E E AG++ KP+ M+ I
Sbjct: 779 NGIEVTRQIRSLGDDTPIIILTAYDWSEIEAEA-RAAGVNAFCAKPIFMSDI 829
>gi|148975728|ref|ZP_01812559.1| hypothetical protein VSWAT3_26471 [Vibrionales bacterium SWAT-3]
gi|145964801|gb|EDK30053.1| hypothetical protein VSWAT3_26471 [Vibrionales bacterium SWAT-3]
Length = 839
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/118 (33%), Positives = 66/118 (55%), Gaps = 5/118 (4%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+D+ M ++I S L+ G++ +A NG+EAVD+ GA+F V +D MPVMDGI
Sbjct: 719 LIVEDNLMNQKIASFFLEQAGYEYLIASNGQEAVDVITQGAQFDAVLMDCMMPVMDGITV 778
Query: 90 TKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+A+R + E + I+ +T+ E + + AG++ KP ++ L L
Sbjct: 779 TRAIRQWENEQQTTPLPIIALTASVLEEDIKDCFDAGMNAYLPKPYKSHQLYDLFSSL 836
>gi|443475947|ref|ZP_21065876.1| multi-sensor hybrid histidine kinase [Pseudanabaena biceps PCC 7429]
gi|443019143|gb|ELS33280.1| multi-sensor hybrid histidine kinase [Pseudanabaena biceps PCC 7429]
Length = 1390
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/127 (27%), Positives = 80/127 (62%), Gaps = 3/127 (2%)
Query: 18 ENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVE-VAENGKEAVDLFRTGAKFHIVF 76
++ +++ RP L+V+D+ + +R+ +++ + +G+++E +A +G +A+ F +F +V
Sbjct: 1255 DSKMAEKRPLRILLVEDNSVNQRVATLMFRRLGYQIEAIANDGLQAIQ-FLQNHEFDLVL 1313
Query: 77 IDMEMPVMDGIEATKAMRA-MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
+D++MP MDGI ATK +R +K + +IV +T+ +R+ AG+D +KP+ + +
Sbjct: 1314 MDIQMPEMDGITATKLIRTDLKSQVRIVAMTADVMPEDRQACFDAGMDDYVSKPIDIQDV 1373
Query: 136 VPLLEEL 142
+ ++ +
Sbjct: 1374 IRIVSSV 1380
>gi|440760444|ref|ZP_20939556.1| Two-component sensor protein RcsC [Pantoea agglomerans 299R]
gi|436425817|gb|ELP23542.1| Two-component sensor protein RcsC [Pantoea agglomerans 299R]
Length = 950
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N L+VDD P+ R + S L ++G++V+ A++G +A+++ + IV D+ MP
Sbjct: 823 NDDIMVLIVDDHPINRMLLSEQLGTLGYQVKTAQDGVDALNVLSRN-EIDIVLTDVNMPN 881
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + +VGVT+ E++ M AG+D C +KP+T+
Sbjct: 882 MDGYRLTQRLRQLGHLFPVVGVTANALAEEKQRCMDAGMDNCLSKPVTL 930
>gi|386817637|ref|ZP_10104855.1| multi-sensor hybrid histidine kinase [Thiothrix nivea DSM 5205]
gi|386422213|gb|EIJ36048.1| multi-sensor hybrid histidine kinase [Thiothrix nivea DSM 5205]
Length = 984
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 44/142 (30%), Positives = 76/142 (53%), Gaps = 5/142 (3%)
Query: 7 GASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF 66
G + K +E+ S + LVV+D+P+ + I S +L G +V+VA+NG+E VD
Sbjct: 836 GKRNHAKTPTAEDAASPLKGLRILVVEDNPINQLIASEMLAQFGAQVDVADNGQEGVDKI 895
Query: 67 RTGAK---FHIVFIDMEMPVMDGIEATKAMRAMK--VESKIVGVTSRNSETEREVFMQAG 121
F +V +D++MP+MDG AT+A+R + E I+ +T+ E+E + AG
Sbjct: 896 TANPDDIPFDVVLMDIQMPLMDGYAATRAIRKLPRFRELPIIALTANAMVEEKEHCLSAG 955
Query: 122 LDLCYTKPLTMAKIVPLLEELQ 143
++ KP +++ + EL
Sbjct: 956 MNAHVAKPFQPEELLQTVLELH 977
Score = 45.8 bits (107), Expect = 0.006, Method: Composition-based stats.
Identities = 32/117 (27%), Positives = 53/117 (45%), Gaps = 2/117 (1%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
I P+ Y ALVVDD R +L + A +G+ A+D+ R G +
Sbjct: 707 IIRQPLHNLHVYKALVVDDHAPARAAMQRMLMHFNIQSLAASSGEAALDILRQGGAIDFI 766
Query: 76 FIDMEMPVMDGIEATKAMRAM--KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
F D MP + G + A R + ++ IV V++ ++ E+ Q +D +KP+
Sbjct: 767 FTDWIMPGLRGEKLMTAFRELPQAQQASIVVVSAYDNSEIHELCSQQQVDYFLSKPV 823
>gi|386394368|ref|ZP_10079149.1| PAS domain S-box [Desulfovibrio sp. U5L]
gi|385735246|gb|EIG55444.1| PAS domain S-box [Desulfovibrio sp. U5L]
Length = 1526
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/138 (31%), Positives = 79/138 (57%), Gaps = 6/138 (4%)
Query: 13 KARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKF 72
K E + RP L+ +D+P+ R +L++ G ++ A +G+EA++ + A F
Sbjct: 1388 KTTTEEAAPAPGRPLKILLAEDNPINRLFLQELLRNDGHTIKPAVDGQEALEALQNEA-F 1446
Query: 73 HIVFIDMEMPVMDGIEATKAMRAM---KVESK--IVGVTSRNSETEREVFMQAGLDLCYT 127
+V +D+ MP MDGIEAT+ +R K+++K I+ +T+ + E F++AG+D +
Sbjct: 1447 DLVLMDISMPGMDGIEATRRIRGSVSDKIDAKIPIIALTAHAFREDEERFLKAGMDGYLS 1506
Query: 128 KPLTMAKIVPLLEELQKN 145
KP+ AK+ +L + K+
Sbjct: 1507 KPIDPAKLRKILNKYAKS 1524
>gi|304397529|ref|ZP_07379407.1| integral membrane sensor hybrid histidine kinase [Pantoea sp. aB]
gi|304355147|gb|EFM19516.1| integral membrane sensor hybrid histidine kinase [Pantoea sp. aB]
Length = 950
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N L+VDD P+ R + S L ++G++V+ A++G +A+++ + IV D+ MP
Sbjct: 823 NDDIMVLIVDDHPINRMLLSEQLGTLGYQVKTAQDGVDALNVLSRN-EIDIVLTDVNMPN 881
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + +VGVT+ E++ M AG+D C +KP+T+
Sbjct: 882 MDGYRLTQRLRQLGHLFPVVGVTANALAEEKQRCMDAGMDNCLSKPVTL 930
>gi|171912784|ref|ZP_02928254.1| Signal transduction histidine kinase [Verrucomicrobium spinosum DSM
4136]
Length = 821
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/116 (37%), Positives = 67/116 (57%), Gaps = 3/116 (2%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIE 88
ALVVDD R + + +L VG +V +AENG++A+++ R ++ IVF+DM MP +DGIE
Sbjct: 616 ALVVDDIAENREVLATLLTLVGCEVVLAENGRQAIEVVRV-SRPQIVFMDMRMPELDGIE 674
Query: 89 ATKAM--RAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
AT+ + + KIV ++ ERE +++ G D KP +I +E L
Sbjct: 675 ATRRLVEEFGSMGLKIVATSASALAHEREAYLKTGCDDFVAKPFRAERIYGCIETL 730
>gi|117926233|ref|YP_866850.1| multi-sensor hybrid histidine kinase [Magnetococcus marinus MC-1]
gi|117609989|gb|ABK45444.1| multi-sensor hybrid histidine kinase [Magnetococcus marinus MC-1]
Length = 1202
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/126 (31%), Positives = 74/126 (58%), Gaps = 6/126 (4%)
Query: 15 RISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHI 74
RIS+N +S L+V+D P+ +++ +L +G +VE+A +G E V LF ++ +
Sbjct: 921 RISQNNMSATFDAAVLLVEDHPINQQVARGMLAGLGCRVEIANDGHEGVRLF-ARHRYDL 979
Query: 75 VFIDMEMPVMDGIEATKAMRAMKVESK-----IVGVTSRNSETEREVFMQAGLDLCYTKP 129
V +D++MP MDG E T A+R M+ + IV +T+ E +R+ + A +D +KP
Sbjct: 980 VLMDIQMPGMDGYETTDAIRQMERSERWPRTPIVALTANAMEQDRDRCLAADMDDYLSKP 1039
Query: 130 LTMAKI 135
+++ ++
Sbjct: 1040 ISLDRL 1045
Score = 45.4 bits (106), Expect = 0.008, Method: Composition-based stats.
Identities = 35/123 (28%), Positives = 60/123 (48%), Gaps = 7/123 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVF----IDMEMPVM 84
ALVVDD+ R + L + G +GK+A++ AKF + F +D+ MP M
Sbjct: 788 ALVVDDNATNRNLLGRYLSNWGVTHLECASGKQALEKIADAAKFGLSFDLAILDLLMPGM 847
Query: 85 DGIEATKAMRAMKVESKIVG---VTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
DG+ + + M + +I V ++ RE QAG+ +KP+ A++ LL +
Sbjct: 848 DGLALAERITQMVQDKQIKPLRMVLLTSAHARREELEQAGVVAALSKPIRQAQLRALLGQ 907
Query: 142 LQK 144
+ +
Sbjct: 908 VMR 910
>gi|354724459|ref|ZP_09038674.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Enterobacter mori LMG 25706]
Length = 948
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/111 (33%), Positives = 66/111 (59%), Gaps = 1/111 (0%)
Query: 22 SKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEM 81
S N LVVDD P+ RR+ + L S+G++ + A +G +A+++ + IV D+ M
Sbjct: 820 SVNDDMMILVVDDHPINRRLLADQLGSLGYQCKTANDGVDALNVL-SKNHIDIVLSDVNM 878
Query: 82 PVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
P MDG T+ +R + + +VGVT+ E++ +++G+D C +KP+T+
Sbjct: 879 PNMDGYRLTQRIRQLGLTLPVVGVTANALAEEKQRCLESGMDSCLSKPVTL 929
>gi|11499482|ref|NP_070723.1| response regulator [Archaeoglobus fulgidus DSM 4304]
gi|2648641|gb|AAB89351.1| response regulator [Archaeoglobus fulgidus DSM 4304]
Length = 117
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 73/113 (64%), Gaps = 4/113 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
+VVDD+ +R I ++LK +KV A NG+EAV+L+R + IV +D+ MP+M+GIEA
Sbjct: 5 MVVDDEIAMREILKIMLKD--YKVIEASNGREAVELYRE-ERPDIVLMDVMMPLMNGIEA 61
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T ++ + ++KIV +T+ S ++ E ++AG D KP T ++V L++ +
Sbjct: 62 TSEIKKIDPDAKIVAITAYAS-SKGEKVIEAGADYILKKPFTRKEVVELIKRI 113
>gi|317499092|ref|ZP_07957371.1| response regulator receiver domain-containing protein
[Lachnospiraceae bacterium 5_1_63FAA]
gi|316893612|gb|EFV15815.1| response regulator receiver domain-containing protein
[Lachnospiraceae bacterium 5_1_63FAA]
Length = 985
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 70/117 (59%), Gaps = 6/117 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGA--KFHIVFIDMEMPVMDGI 87
L+V+D+ + I IL GF+V+ AE+G EAV+ R A + +V +D++MPVM+G
Sbjct: 865 LLVEDNELNSEIAMAILNEYGFQVDTAEDGAEAVEKIRNSAPGDYELVLMDIQMPVMNGY 924
Query: 88 EATKAMRAMK----VESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLE 140
EA K +RA+ E I+ +T+ + +R+ ++ G+D +KP+ + +++ L+
Sbjct: 925 EAAKQIRALDDPALAEITILAMTANAFDEDRKKALECGMDGFLSKPIVIEELIHTLQ 981
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 29 ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT----GAKFHIVFIDMEMPVM 84
ALV+DDD + +L VG + E +GKEAV R G FH ID +P M
Sbjct: 722 ALVIDDDFNTCDSVTKMLAKVGMRSEWTLSGKEAVLRARQSIELGDAFHAYIIDWRLPDM 781
Query: 85 DGIEATKAMRAMKVESKIVGVTSRN-SETEREVFMQAGLDLCYTKPLTMAKI 135
+GIE T+ +R++ ++ I+ +T+ + SE E E AG++ KP+ M+ I
Sbjct: 782 NGIEVTRQIRSLGDDTPIIILTAYDWSEIEAEA-RAAGVNAFCAKPIFMSDI 832
>gi|126658113|ref|ZP_01729265.1| CheA signal transduction histidine kinase [Cyanothece sp. CCY0110]
gi|126620751|gb|EAZ91468.1| CheA signal transduction histidine kinase [Cyanothece sp. CCY0110]
Length = 955
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/130 (34%), Positives = 72/130 (55%), Gaps = 4/130 (3%)
Query: 16 ISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIV 75
I +N V + LVVDD +RR S++L G++VE A++G+EAVD G + + V
Sbjct: 819 IKDNSVVTEKTSTILVVDDSINVRRYLSIMLNKAGYQVEEAKDGQEAVDKLLNGLQVNAV 878
Query: 76 FIDMEMPVMDGIEATKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
D+EMP +DG + ++ K E K I+ +TSR+ E R++ M G ++KP T
Sbjct: 879 ISDLEMPRLDGYGVLEVLK-QKDEFKQLPIMILTSRSQEKHRKLAMNLGASAYFSKPYTE 937
Query: 133 AKIVPLLEEL 142
K++ L +
Sbjct: 938 QKLLNTLAKF 947
>gi|426197980|gb|EKV47906.1| SSK1 response regulator receiver [Agaricus bisporus var. bisporus
H97]
Length = 1093
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 36/91 (39%), Positives = 58/91 (63%), Gaps = 4/91 (4%)
Query: 26 PYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMD 85
P L+VDD+P+ + I S +K + +A NGKEAV+ ++TG FH++ +D+ MP+MD
Sbjct: 797 PISVLIVDDNPINQTILSTFMKRKKIRYGIANNGKEAVEKWKTGG-FHLILMDIRMPIMD 855
Query: 86 GIEATKAMR---AMKVESKIVGVTSRNSETE 113
GIEAT+ +R M V S++V + S ++
Sbjct: 856 GIEATREIRRLEKMSVTSEVVAAVTVRSPSD 886
>gi|406671403|ref|ZP_11078642.1| hypothetical protein HMPREF9706_00902 [Facklamia hominis CCUG
36813]
gi|405580653|gb|EKB54712.1| hypothetical protein HMPREF9706_00902 [Facklamia hominis CCUG
36813]
Length = 250
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/107 (31%), Positives = 65/107 (60%), Gaps = 1/107 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD+P I + LK G+KV +A +GK A D+ + F +V +D+ +P MDG+E
Sbjct: 5 LVVDDEPSIVILLEYTLKQAGYKVSIARDGKAAYDMI-SSQNFDLVLLDIMLPKMDGMEV 63
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
+ +R +++ I+ +T+++ E ++ + ++ G D TKP + +++
Sbjct: 64 CRRIRQERIQVPIIMLTAKSEEYDKIIGLELGADDYITKPFSPREVI 110
>gi|359431887|ref|ZP_09222293.1| two-component system, NarL family, sensor histidine kinase BarA
[Pseudoalteromonas sp. BSi20652]
gi|357921409|dbj|GAA58542.1| two-component system, NarL family, sensor histidine kinase BarA
[Pseudoalteromonas sp. BSi20652]
Length = 778
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/122 (31%), Positives = 70/122 (57%), Gaps = 1/122 (0%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P K + ALVVDD+ + + I S +L + V +AENG++A+D I+F+D+
Sbjct: 463 PHPKFSGFNALVVDDNRINQEIASALLARLDMTVIIAENGRDALDKVEIN-DIDIIFMDV 521
Query: 80 EMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
+MPVMDG+EAT+ +R ++ I+ +T+ +++ +++G+D KP+ +
Sbjct: 522 QMPVMDGLEATRILRERGYKTPIITITAAADPNDKKAALRSGMDDFLVKPIIFDAFYECI 581
Query: 140 EE 141
E+
Sbjct: 582 EK 583
>gi|336172007|ref|YP_004579145.1| signal transduction histidine kinase with CheB and CheR activity
[Lacinutrix sp. 5H-3-7-4]
gi|334726579|gb|AEH00717.1| signal transduction histidine kinase with CheB and CheR activity
[Lacinutrix sp. 5H-3-7-4]
Length = 1477
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/136 (30%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 9 SSSKKARISENPVSKNRPYF---ALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDL 65
+++K I +N KN+ L+ +DD +IR + ++LK G V A+NGKEAV+L
Sbjct: 1339 ANTKHKSIEKNQKLKNKFLLNKNILIAEDDSLIRLLFKIVLKDTGVNVLFAKNGKEAVEL 1398
Query: 66 FRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLC 125
+++ +V +D+ MP M GIEA + + + E+KI+ T+ + E+E G
Sbjct: 1399 YKSTPNIDVVLLDIRMPEMSGIEAMEIILKLNPEAKIIMQTAYAMQDEKEKCYHKGCVDF 1458
Query: 126 YTKPLTMAKIVPLLEE 141
+KP+ ++ L +
Sbjct: 1459 LSKPIVKEELFTKLSK 1474
>gi|376296331|ref|YP_005167561.1| multi-sensor signal transduction histidine kinase [Desulfovibrio
desulfuricans ND132]
gi|323458892|gb|EGB14757.1| multi-sensor signal transduction histidine kinase [Desulfovibrio
desulfuricans ND132]
Length = 647
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 55/79 (69%), Gaps = 1/79 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+VDD+ +RR + L +G++VE A NG+EA+DLF + + HIVF D++MPVMDGI+
Sbjct: 7 LLVDDEEGVRRFLGLSLMDLGYEVETAANGQEALDLFDS-FRPHIVFTDIKMPVMDGIDL 65
Query: 90 TKAMRAMKVESKIVGVTSR 108
KA++ ++++V +T
Sbjct: 66 LKAIKERSPDTEVVMITGH 84
>gi|372275028|ref|ZP_09511064.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Pantoea sp. SL1_M5]
gi|390435245|ref|ZP_10223783.1| hybrid sensory kinase in two-component regulatory system with RcsB
and YojN [Pantoea agglomerans IG1]
Length = 950
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/109 (33%), Positives = 64/109 (58%), Gaps = 1/109 (0%)
Query: 24 NRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPV 83
N L+VDD P+ R + S L ++G++V+ A++G +A+++ + IV D+ MP
Sbjct: 823 NDDIMVLIVDDHPINRMLLSEQLGTLGYQVKTAQDGVDALNVLSRN-EIDIVLTDVNMPN 881
Query: 84 MDGIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTM 132
MDG T+ +R + +VGVT+ E++ M AG+D C +KP+T+
Sbjct: 882 MDGYRLTQRLRQLGHLFPVVGVTANALAEEKQRCMDAGMDNCLSKPVTL 930
>gi|442320752|ref|YP_007360773.1| DNA-binding response regulator [Myxococcus stipitatus DSM 14675]
gi|441488394|gb|AGC45089.1| DNA-binding response regulator [Myxococcus stipitatus DSM 14675]
Length = 230
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 65/107 (60%), Gaps = 2/107 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDDDP +R I L+ GF+VE A +G+ AVD R A ++ +D+ MP MDG+E
Sbjct: 8 LVVDDDPHLRDIVRFALEQGGFRVEEAPDGQAAVDHVRR-APPALIVLDIMMPEMDGLEV 66
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIV 136
+A+R E IV ++SR+ E +R + ++ G D TKP + ++V
Sbjct: 67 CRAVRRSH-ELPIVFLSSRDDEVDRILGLELGGDDYLTKPFSPRELV 112
>gi|428186585|gb|EKX55435.1| hypothetical protein GUITHDRAFT_149795 [Guillardia theta CCMP2712]
Length = 141
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 79/129 (61%), Gaps = 11/129 (8%)
Query: 26 PYFALVVDDDPMIRRIH-SMILKSVGFK---VEVAENGKEAV-DLFRTGAKFHIVFIDME 80
P LVV+D+P+ +++ +M+ K++G + V+VA NG+E + + G K+ ++ +D++
Sbjct: 2 PTHVLVVEDNPVNQKVAVAMVQKTLGREHVIVDVANNGREGLANSTEHGHKYDLILMDVQ 61
Query: 81 MPVMDGIEATKAMRAMKVESK------IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAK 134
MPVMDG+EAT+ +R + IV VT+ S+ E ++AG++ +KPLT+
Sbjct: 62 MPVMDGLEATRRIREWEKSHAGEAPYFIVAVTAHASKMHVEECLEAGMNRHASKPLTLVS 121
Query: 135 IVPLLEELQ 143
+ ++EE +
Sbjct: 122 MRRVVEEYR 130
>gi|410669241|ref|YP_006921612.1| PAS domain protein [Methanolobus psychrophilus R15]
gi|409168369|gb|AFV22244.1| PAS domain protein [Methanolobus psychrophilus R15]
Length = 1200
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 70/115 (60%), Gaps = 6/115 (5%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L+V+DD +++ +L GF V NG EA+ + +VF+D++MP MDG+EA
Sbjct: 1072 LLVEDDIYSQKVAQEMLMRDGFNVNAVNNGIEAIKALEI-MPYDLVFMDVQMPEMDGLEA 1130
Query: 90 TKAMRA--MKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
TK +R+ KV +K I+ +T+ + +RE+F++AG+D +KP+T+ + LL
Sbjct: 1131 TKHIRSPDSKVLNKNIPIIALTAHAMQGDRELFIEAGMDDYMSKPITLKTLGELL 1185
>gi|336369216|gb|EGN97558.1| hypothetical protein SERLA73DRAFT_56982 [Serpula lacrymans var.
lacrymans S7.3]
Length = 1185
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 79/142 (55%), Gaps = 14/142 (9%)
Query: 3 IGAEGASSSKKARISENPVSK----NRPYFALVVDDDPMI-RRIHSMILKSVGFKVEVAE 57
+ A+ +S+ + + N VS N F +++ +D M+ +++ IL+ G VE+AE
Sbjct: 1008 VTAQDLASALISALESNTVSPVAAPNDVVFDILLAEDNMVNQKLAVKILEKYGHSVEIAE 1067
Query: 58 NGKEAVDLFRT----GAKFHIVFIDMEMPVMDGIEATKAMRAMK-----VESKIVGVTSR 108
NG AVD F+ G F I+ +D+ MP M G+EAT+ +RA + + + I+ +T+
Sbjct: 1068 NGSLAVDAFKARIHQGRPFDIILMDVSMPFMGGMEATELIRAFEMHKGLLRTPIIALTAH 1127
Query: 109 NSETEREVFMQAGLDLCYTKPL 130
+RE +QAG+D TKPL
Sbjct: 1128 AMIGDRERCLQAGMDDHITKPL 1149
>gi|149194248|ref|ZP_01871345.1| histidine kinase [Caminibacter mediatlanticus TB-2]
gi|149135423|gb|EDM23902.1| histidine kinase [Caminibacter mediatlanticus TB-2]
Length = 1023
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/140 (28%), Positives = 83/140 (59%), Gaps = 9/140 (6%)
Query: 12 KKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRT-GA 70
+K I E P+ + + AL+ +D+P+ R++ LKS+G + ++A NG +A + +
Sbjct: 752 RKTTIQEKPIYQIK---ALIAEDNPINRKLLQTKLKSMGIESDIATNGLDAFNKYTMYPE 808
Query: 71 KFHIVFIDMEMPVMDGIEATKAMRAMKVE-----SKIVGVTSRNSETEREVFMQAGLDLC 125
K+ ++F+D++MP MDGIEAT+ + + E + I+ VT+ + ++E F+ G+D
Sbjct: 809 KYDVIFMDIQMPTMDGIEATQEIIEFEKEEGIPHTPIIAVTANVLKGDKERFLGTGMDDY 868
Query: 126 YTKPLTMAKIVPLLEELQKN 145
+KP+ ++ +++ + K+
Sbjct: 869 ISKPIETNELERVIKNIAKH 888
>gi|39996387|ref|NP_952338.1| sensor histidine kinase response regulator, PAS and PAS
domain-containing [Geobacter sulfurreducens PCA]
gi|39983267|gb|AAR34661.1| sensor histidine kinase response regulator, PAS and PAS
domain-containing [Geobacter sulfurreducens PCA]
Length = 772
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/115 (35%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 25 RPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVM 84
RP L+VDD + R++ S++L+S G +V A +G EA+ A F +V +D++MPVM
Sbjct: 544 RPLSVLLVDDSAVSRKVVSLLLESDGHRVTFAGDGVEALAAIGREA-FDLVLMDVQMPVM 602
Query: 85 DGIEATKAMRAMKVES----KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKI 135
DG EA +A+RA + I+ +T+R +RE+ ++AG D KP+ +++
Sbjct: 603 DGFEAMRAIRAGEAAGGARLPIIALTARALAGDRELCLEAGADDYLAKPVNFSEL 657
>gi|409403048|ref|ZP_11252448.1| multi-sensor hybrid histidine kinase [Acidocella sp. MX-AZ02]
gi|409128485|gb|EKM98392.1| multi-sensor hybrid histidine kinase [Acidocella sp. MX-AZ02]
Length = 849
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 42/119 (35%), Positives = 67/119 (56%), Gaps = 4/119 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLF-RTGAKFHIVFIDMEMPVMDGIE 88
L+VDD+ + +R+ + IL++ G V VA+NG AVD+ R +F IV +D MP +DG+E
Sbjct: 584 LLVDDNRVNQRVFTRILEAAGHNVTVADNGNLAVDILEREDERFDIVLMDFNMPGLDGLE 643
Query: 89 ATKAMRAMKV---ESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEELQK 144
ATK R M + IVG+T+ + A +D C KP+ +V +E++ +
Sbjct: 644 ATKLYRVMALGRDRLPIVGLTADAFAQMSGEWRSADMDGCLVKPVAPQDLVAAVEKMAR 702
>gi|388569253|ref|ZP_10155656.1| multi-sensor hybrid histidine kinase [Hydrogenophaga sp. PBC]
gi|388263494|gb|EIK89081.1| multi-sensor hybrid histidine kinase [Hydrogenophaga sp. PBC]
Length = 2097
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 2/103 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD + + I +L+ G V +A NG+EA+ L R G F +V +D++MP MDG++A
Sbjct: 1760 LVVDDSDINQEIAQHMLQREGAHVFLASNGREALALLRDGPHFDVVLMDVQMPEMDGLQA 1819
Query: 90 TKAMRAMK--VESKIVGVTSRNSETEREVFMQAGLDLCYTKPL 130
T+ +RA +V +T+ ER + AG+D TKP+
Sbjct: 1820 TRELRADDNLCHLPVVALTAGALAEERRRALDAGMDHFLTKPI 1862
>gi|253989039|ref|YP_003040395.1| sensor protein [Photorhabdus asymbiotica]
gi|253780489|emb|CAQ83651.1| sensor protein [Photorhabdus asymbiotica]
Length = 943
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/113 (32%), Positives = 66/113 (58%), Gaps = 1/113 (0%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LVVDD P+ R + + LKS+GF+ +A +G +A++ + I+ D+ MP MDG
Sbjct: 827 LVVDDHPINRYLLTDQLKSIGFQAAMANDGLDALEYLKK-EYVDIILTDVNMPNMDGYAL 885
Query: 90 TKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T +R E I+G+T+ E++ + AG++ C +KP+++A + +L E+
Sbjct: 886 TMYLRNKGCELPIIGITANALAEEKQRCIDAGMNDCLSKPVSLATLKQVLTEV 938
>gi|254463944|ref|ZP_05077355.1| sensory box sensor histidine kinase/response regulator
[Rhodobacterales bacterium Y4I]
gi|206684852|gb|EDZ45334.1| sensory box sensor histidine kinase/response regulator
[Rhodobacterales bacterium Y4I]
Length = 755
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 68/114 (59%), Gaps = 2/114 (1%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
LV +D+ + R + L+ +V A+NG+EAV F A I+ +DM MP MDG++A
Sbjct: 633 LVAEDNAVNRVLLEKFLQPTPAEVVFAQNGREAVAQFEAFAP-DIILMDMSMPEMDGLDA 691
Query: 90 TKAMRA-MKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEEL 142
T+A+RA + + IV +T+ +++RE + AG+D +KP+ K++ LL L
Sbjct: 692 TRAIRARAQTQPAIVALTANAFDSDREACLAAGMDEFMSKPVNRGKLLDLLVHL 745
>gi|254413753|ref|ZP_05027522.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Coleofasciculus chthonoplastes PCC 7420]
gi|196179350|gb|EDX74345.1| ATPase, histidine kinase-, DNA gyrase B-, and HSP90-like domain
protein [Coleofasciculus chthonoplastes PCC 7420]
Length = 1022
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/117 (31%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 27 YFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDG 86
Y LVV+D + R++ +LK VGF+V+ AENG+ A+ L++ ++F+DM +P+MDG
Sbjct: 809 YRILVVEDHLVNRQLLVTLLKEVGFQVKSAENGQAAIALWQKWQP-ELIFMDMHIPIMDG 867
Query: 87 IEATKAMRAMKVES--KIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLLEE 141
+AT+ ++ + I+ +T+ +RE + AG D +KP + +I+ ++ +
Sbjct: 868 YQATRQIKQSNFATIPPIIAITASAFAHKREECLTAGCDAFISKPFHLEEILEIISQ 924
>gi|410663232|ref|YP_006915603.1| GacS [Simiduia agarivorans SA1 = DSM 21679]
gi|409025589|gb|AFU97873.1| GacS [Simiduia agarivorans SA1 = DSM 21679]
Length = 905
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/125 (32%), Positives = 75/125 (60%), Gaps = 5/125 (4%)
Query: 23 KNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMP 82
+N+P L VDD+P ++ +L +G +V +A +GK+A++L F ++F+D++MP
Sbjct: 633 ENKPRI-LAVDDNPANLQLVGELLNGLGAEVALASDGKQAIELAENKL-FDMIFMDLQMP 690
Query: 83 VMDGIEATKAMRAM---KVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
VMDG+EATK +R+ K + IV +T+ ++ + AG+D +KP++ A++ ++
Sbjct: 691 VMDGLEATKIIRSRESGKRRTPIVALTAHAMAEQKSQLLLAGMDDYLSKPVSEAQLAHII 750
Query: 140 EELQK 144
K
Sbjct: 751 NRWLK 755
>gi|153820596|ref|ZP_01973263.1| sensor histidine kinase/response regulator [Vibrio cholerae NCTC
8457]
gi|126508859|gb|EAZ71453.1| sensor histidine kinase/response regulator [Vibrio cholerae NCTC
8457]
Length = 115
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 55/88 (62%)
Query: 43 SMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVESKI 102
++L +G+ V +AENG +AV+L F +V +D+ MP+MDGI ATK +R +E I
Sbjct: 13 QLLLNKLGYDVTIAENGLQAVELLEKNHVFDLVLMDISMPIMDGIAATKILRDKHIEIPI 72
Query: 103 VGVTSRNSETEREVFMQAGLDLCYTKPL 130
+ +T+ + ++++ + AG++ KP+
Sbjct: 73 IALTAHTAGSDKQNCIDAGMNDIVLKPI 100
>gi|254785340|ref|YP_003072769.1| signal transduction histidine-protein kinase BarA [Teredinibacter
turnerae T7901]
gi|237685431|gb|ACR12695.1| signal transduction histidine-protein kinase BarA [Teredinibacter
turnerae T7901]
Length = 932
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 37/105 (35%), Positives = 67/105 (63%), Gaps = 4/105 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDMEMPVMDGIEA 89
L VDD+P R+ S +LK + KV +NG +A+ L +T ++F ++ +D++MP MDG+EA
Sbjct: 664 LAVDDNPANLRLVSELLKEMHVKVVTVDNGADAIRLSQT-SQFDLILMDIQMPGMDGLEA 722
Query: 90 TKAMRAMKVESK---IVGVTSRNSETEREVFMQAGLDLCYTKPLT 131
TK +R+ + + +V +T+ + ++ F+ AG+D TKP++
Sbjct: 723 TKRLRSSESREERTPVVALTAHAANEQKSRFLLAGMDDYLTKPVS 767
>gi|209524853|ref|ZP_03273399.1| CheA signal transduction histidine kinase [Arthrospira maxima CS-328]
gi|376007692|ref|ZP_09784882.1| CheA Signal Transduction Histidine Kinases (STHK); Two-component
hybrid sensor and regulator [Arthrospira sp. PCC 8005]
gi|423063057|ref|ZP_17051847.1| CheA signal transduction histidine kinase [Arthrospira platensis C1]
gi|209494732|gb|EDZ95041.1| CheA signal transduction histidine kinase [Arthrospira maxima CS-328]
gi|375323936|emb|CCE20635.1| CheA Signal Transduction Histidine Kinases (STHK); Two-component
hybrid sensor and regulator [Arthrospira sp. PCC 8005]
gi|406715636|gb|EKD10790.1| CheA signal transduction histidine kinase [Arthrospira platensis C1]
Length = 1383
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 43/112 (38%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 20 PVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTGAKFHIVFIDM 79
P SK P L+VDD +R + SM + G++VE A +GKEA + ++G IVF D+
Sbjct: 1234 PASKTEPT-VLIVDDSITVRSLLSMTFEKSGYRVEEARDGKEAWEKLKSGLPCDIVFCDI 1292
Query: 80 EMPVMDGIEATKAM-RAMKVES-KIVGVTSRNSETEREVFMQAGLDLCYTKP 129
EMP MDG+E M + ++E I +TSR ++ R++ Q G +TKP
Sbjct: 1293 EMPRMDGLELLSRMQKDPQLEGLPIAMLTSRGADRHRQMAYQLGARGYFTKP 1344
>gi|149174179|ref|ZP_01852807.1| sensory transduction histidine kinase [Planctomyces maris DSM 8797]
gi|148847159|gb|EDL61494.1| sensory transduction histidine kinase [Planctomyces maris DSM 8797]
Length = 739
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 38/114 (33%), Positives = 66/114 (57%), Gaps = 4/114 (3%)
Query: 30 LVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVDLFRTG----AKFHIVFIDMEMPVMD 85
L+V+D P +R+ +LKS G +V +AENG+ A+DL + F ++ +DM+MPV+D
Sbjct: 608 LLVEDGPDNQRLIRFMLKSAGAEVTLAENGQIALDLVAKAESEQSPFDVILMDMQMPVLD 667
Query: 86 GIEATKAMRAMKVESKIVGVTSRNSETEREVFMQAGLDLCYTKPLTMAKIVPLL 139
G AT+ +R I+ +T+ T+RE +++G D KP+ ++ L+
Sbjct: 668 GYAATRQLRNEGYARPIIALTAHAMATDREKCIESGCDDYAIKPIDRLNLIELI 721
>gi|429770266|ref|ZP_19302335.1| PAS domain S-box protein [Brevundimonas diminuta 470-4]
gi|429184925|gb|EKY25922.1| PAS domain S-box protein [Brevundimonas diminuta 470-4]
Length = 527
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 45/141 (31%), Positives = 74/141 (52%), Gaps = 9/141 (6%)
Query: 5 AEGASSSKKARISENPVSKNRPYFALVVDDDPMIRRIHSMILKSVGFKVEVAENGKEAVD 64
+ G +S P + R L V+D+P + + +L+ +GF++ A+NG E V+
Sbjct: 373 SNGVEASAATAEQPEPAGRLR---VLAVEDNPANQMVVRCLLEPLGFEIVTADNGAEGVE 429
Query: 65 LFRTGAKFHIVFIDMEMPVMDGIEATKAMRAMKVES-----KIVGVTSRNSETEREVFMQ 119
F F +V +DM+MPVMDG+EA + +RA + S IV +T+ +E MQ
Sbjct: 430 RFML-EPFDMVLMDMQMPVMDGLEAMRLIRAAEARSGRRRTPIVMLTANTTEAHHVKAMQ 488
Query: 120 AGLDLCYTKPLTMAKIVPLLE 140
AG D KP+T+ ++ +E
Sbjct: 489 AGADHLTAKPVTLQILLNGME 509
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.133 0.361
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,949,402,504
Number of Sequences: 23463169
Number of extensions: 66275738
Number of successful extensions: 322438
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 18324
Number of HSP's successfully gapped in prelim test: 67599
Number of HSP's that attempted gapping in prelim test: 248980
Number of HSP's gapped (non-prelim): 91021
length of query: 145
length of database: 8,064,228,071
effective HSP length: 109
effective length of query: 36
effective length of database: 9,801,709,946
effective search space: 352861558056
effective search space used: 352861558056
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)