BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045937
(79 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13917|7SB1_SOYBN Basic 7S globulin OS=Glycine max GN=BG PE=1 SV=2
Length = 427
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 5 LWSIIGANSIVRVSNDVSCLGFVDGGVTPKTSIVIGGHQLDNNLVQFDIATSRLGFSNSL 64
+W I G + +V+ V+CLG ++GG+ P+ I +G QL+ NLV FD+A SR+GFS S
Sbjct: 351 VWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEITLGARQLEENLVVFDLARSRVGFSTSS 410
Query: 65 LLQR-TMCSN-FNF 76
L C++ FNF
Sbjct: 411 LHSHGVKCADLFNF 424
>sp|Q8RVH5|7SBG2_SOYBN Basic 7S globulin 2 OS=Glycine max PE=1 SV=1
Length = 433
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 40/61 (65%)
Query: 5 LWSIIGANSIVRVSNDVSCLGFVDGGVTPKTSIVIGGHQLDNNLVQFDIATSRLGFSNSL 64
+W I G + +V+ V+CLG ++GG+ P+ + +G QL+ L+ FD+A SR+GFS S
Sbjct: 357 VWRISGEDLMVQAQPGVTCLGVMNGGMQPRAEVTLGTRQLEEKLMVFDLARSRVGFSTSS 416
Query: 65 L 65
L
Sbjct: 417 L 417
>sp|Q9LZL3|PCS1L_ARATH Aspartic proteinase PCS1 OS=Arabidopsis thaliana GN=PCS1 PE=2 SV=1
Length = 453
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Query: 17 VSND-VSCLGFVDGGVTPKTSIVIGGHQLDNNLVQFDIATSRLGFS 61
V ND V C F + + + VIG H N ++FD+ SR+G +
Sbjct: 393 VGNDSVYCFTFGNSDLMGMEAYVIGHHHQQNMWIEFDLQRSRIGLA 438
>sp|Q04228|UBX2_YEAST UBX domain-containing protein 2 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=UBX2 PE=1 SV=1
Length = 584
Score = 30.0 bits (66), Expect = 3.9, Method: Composition-based stats.
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 2/62 (3%)
Query: 6 WSIIGANSIVRVSNDVSCLGFVDGGVTPKTSIVIG--GHQLDNNLVQFDIATSRLGFSNS 63
WS + I ++S D L F +G + T+ I GH ++N L FD+ +L F
Sbjct: 477 WSNALQDKIRQLSADDDMLCFKEGQLETATATTIEELGHIINNELTSFDLERGKLEFDFE 536
Query: 64 LL 65
L+
Sbjct: 537 LV 538
>sp|B1H285|KBTB8_RAT Kelch repeat and BTB domain-containing protein 8 OS=Rattus
norvegicus GN=Kbtbd8 PE=2 SV=1
Length = 575
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 14 IVRVSNDVSCLGFVDGGVTPKTSIVIGGHQLDNNLVQFDIATSRLGFSNSLLLQRTMC 71
+V ND+ ++ GG P +S V H+ +N+ +D +T+R SLL R C
Sbjct: 304 LVSPDNDI----YIAGGYRPSSSEVSIDHKAENDFWMYDHSTNRWLSKPSLLRARIGC 357
>sp|Q3UQV5|KBTB8_MOUSE Kelch repeat and BTB domain-containing protein 8 OS=Mus musculus
GN=Kbtbd8 PE=2 SV=1
Length = 599
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 14 IVRVSNDVSCLGFVDGGVTPKTSIVIGGHQLDNNLVQFDIATSRLGFSNSLLLQRTMC 71
+V ND+ ++ GG P +S V H+ +N+ +D +T+R SLL R C
Sbjct: 328 LVSPDNDI----YIAGGYRPSSSEVSIDHKAENDFWMYDHSTNRWLSKPSLLRARIGC 381
>sp|Q8NFY9|KBTB8_HUMAN Kelch repeat and BTB domain-containing protein 8 OS=Homo sapiens
GN=KBTBD8 PE=2 SV=2
Length = 601
Score = 29.6 bits (65), Expect = 5.2, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 4/58 (6%)
Query: 14 IVRVSNDVSCLGFVDGGVTPKTSIVIGGHQLDNNLVQFDIATSRLGFSNSLLLQRTMC 71
+V ND+ ++ GG P +S V H+ +N+ +D +T+R SLL R C
Sbjct: 330 LVSPDNDI----YIAGGYRPSSSEVSIDHKAENDFWMYDHSTNRWLSKPSLLRARIGC 383
>sp|Q03RV2|FABH_LACBA 3-oxoacyl-[acyl-carrier-protein] synthase 3 OS=Lactobacillus brevis
(strain ATCC 367 / JCM 1170) GN=fabH PE=3 SV=1
Length = 327
Score = 29.6 bits (65), Expect = 6.3, Method: Composition-based stats.
Identities = 17/45 (37%), Positives = 24/45 (53%), Gaps = 9/45 (20%)
Query: 9 IGANSIVRVSNDVSCLGFVDG---------GVTPKTSIVIGGHQL 44
IGA V + + +C GFV G G +PKT+++IGG L
Sbjct: 100 IGATKAVALDVNAACSGFVYGLQVVHRLLMGDSPKTALLIGGETL 144
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.394
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,871,222
Number of Sequences: 539616
Number of extensions: 837132
Number of successful extensions: 1774
Number of sequences better than 100.0: 8
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 1770
Number of HSP's gapped (non-prelim): 8
length of query: 79
length of database: 191,569,459
effective HSP length: 50
effective length of query: 29
effective length of database: 164,588,659
effective search space: 4773071111
effective search space used: 4773071111
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 55 (25.8 bits)