Query 045940
Match_columns 189
No_of_seqs 138 out of 1184
Neff 7.1
Searched_HMMs 29240
Date Mon Mar 25 12:09:37 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045940.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045940hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1ydh_A AT5G11950; structural g 100.0 4.7E-59 1.6E-63 381.5 21.4 185 2-186 7-191 (216)
2 3sbx_A Putative uncharacterize 100.0 9.6E-59 3.3E-63 372.4 21.4 176 4-180 13-188 (189)
3 3qua_A Putative uncharacterize 100.0 4.4E-58 1.5E-62 371.2 20.8 179 2-181 20-198 (199)
4 1t35_A Hypothetical protein YV 100.0 4E-58 1.4E-62 369.8 19.1 183 4-186 1-183 (191)
5 2a33_A Hypothetical protein; s 100.0 3.7E-57 1.3E-61 370.1 21.8 186 2-187 11-196 (215)
6 1wek_A Hypothetical protein TT 100.0 9.6E-53 3.3E-57 344.4 19.6 179 4-185 37-216 (217)
7 1weh_A Conserved hypothetical 100.0 6.2E-52 2.1E-56 328.5 16.3 168 4-181 1-170 (171)
8 3gh1_A Predicted nucleotide-bi 100.0 3.5E-48 1.2E-52 340.8 18.7 176 2-183 144-332 (462)
9 1rcu_A Conserved hypothetical 100.0 9.2E-47 3.1E-51 304.2 18.1 166 3-184 22-194 (195)
10 3bq9_A Predicted rossmann fold 100.0 9.9E-46 3.4E-50 327.1 18.5 174 2-181 142-328 (460)
11 2iz6_A Molybdenum cofactor car 100.0 8.2E-44 2.8E-48 282.9 9.6 163 2-184 11-173 (176)
12 3maj_A DNA processing chain A; 99.5 2.8E-13 9.4E-18 118.5 17.4 157 4-181 127-303 (382)
13 3uqz_A DNA processing protein 99.5 7.3E-13 2.5E-17 111.9 16.0 157 4-180 106-281 (288)
14 3imk_A Putative molybdenum car 98.0 0.00013 4.3E-09 56.0 11.7 96 38-140 10-110 (158)
15 2nx2_A Hypothetical protein YP 97.9 0.00045 1.5E-08 54.3 14.7 132 3-138 1-169 (181)
16 2f62_A Nucleoside 2-deoxyribos 96.5 0.0036 1.2E-07 48.2 5.2 89 89-185 56-160 (161)
17 2khz_A C-MYC-responsive protei 96.1 0.0038 1.3E-07 48.0 3.3 44 90-139 67-112 (165)
18 3ehd_A Uncharacterized conserv 96.0 0.032 1.1E-06 42.9 8.3 88 89-183 58-161 (162)
19 2o6l_A UDP-glucuronosyltransfe 95.6 0.21 7.3E-06 36.9 11.4 63 99-182 85-151 (170)
20 1f8y_A Nucleoside 2-deoxyribos 93.8 0.11 3.6E-06 39.7 5.6 44 90-139 68-115 (157)
21 3s2u_A UDP-N-acetylglucosamine 93.1 0.34 1.2E-05 40.9 8.2 99 4-137 180-279 (365)
22 4fyk_A Deoxyribonucleoside 5'- 93.1 0.22 7.7E-06 37.8 6.3 44 89-138 57-102 (152)
23 3otg_A CALG1; calicheamicin, T 92.7 1 3.5E-05 37.5 10.7 33 96-138 304-336 (412)
24 3rsc_A CALG2; TDP, enediyne, s 92.3 1 3.5E-05 37.8 10.1 32 96-137 309-340 (415)
25 2p6p_A Glycosyl transferase; X 92.2 2.1 7.3E-05 35.4 11.9 32 97-138 276-307 (384)
26 1rrv_A Glycosyltransferase GTF 91.8 1.5 5.2E-05 37.0 10.7 93 30-138 231-330 (416)
27 2jzc_A UDP-N-acetylglucosamine 91.8 2 6.7E-05 34.4 10.7 52 97-158 128-181 (224)
28 3hbm_A UDP-sugar hydrolase; PS 91.8 1.4 4.8E-05 36.3 10.2 37 87-138 216-252 (282)
29 2iya_A OLEI, oleandomycin glyc 91.4 3.5 0.00012 34.7 12.6 32 97-138 318-349 (424)
30 3h4t_A Glycosyltransferase GTF 91.4 1.6 5.4E-05 36.9 10.4 128 34-183 220-350 (404)
31 1iir_A Glycosyltransferase GTF 91.4 1.2 4.1E-05 37.7 9.6 93 30-138 232-329 (415)
32 1s2d_A Purine trans deoxyribos 91.3 0.48 1.6E-05 36.3 6.3 42 90-137 71-116 (167)
33 3ia7_A CALG4; glycosysltransfe 89.7 3.9 0.00013 33.6 11.1 32 96-137 293-324 (402)
34 2yjn_A ERYCIII, glycosyltransf 89.4 1.4 4.7E-05 37.6 8.3 43 84-138 321-363 (441)
35 4fzr_A SSFS6; structural genom 87.0 1.3 4.5E-05 36.9 6.5 33 95-137 295-327 (398)
36 2iyf_A OLED, oleandomycin glyc 84.6 15 0.0005 30.7 12.0 33 96-138 295-327 (430)
37 3ek6_A Uridylate kinase; UMPK 84.3 14 0.00048 29.4 11.7 125 4-143 9-172 (243)
38 1vgv_A UDP-N-acetylglucosamine 83.0 17 0.00059 29.5 12.5 65 93-182 275-339 (384)
39 3dzc_A UDP-N-acetylglucosamine 82.5 14 0.00048 31.2 11.1 65 93-182 300-364 (396)
40 2an1_A Putative kinase; struct 81.4 2.8 9.7E-05 34.1 6.0 61 2-66 3-93 (292)
41 3rpz_A ADP/ATP-dependent NAD(P 79.7 1.5 5.3E-05 36.1 3.8 102 34-142 29-136 (279)
42 3oti_A CALG3; calicheamicin, T 79.1 5.4 0.00018 33.2 7.1 32 96-137 295-326 (398)
43 3dmy_A Protein FDRA; predicted 77.8 3.7 0.00013 36.5 6.0 74 101-183 329-412 (480)
44 3hbf_A Flavonoid 3-O-glucosylt 77.7 8.5 0.00029 33.7 8.3 42 85-137 330-372 (454)
45 3beo_A UDP-N-acetylglucosamine 77.4 26 0.0009 28.2 12.5 64 93-182 275-339 (375)
46 3tsa_A SPNG, NDP-rhamnosyltran 76.0 2.2 7.5E-05 35.3 3.8 67 99-185 285-356 (391)
47 3ufx_B Succinyl-COA synthetase 75.4 13 0.00043 32.1 8.5 112 47-182 258-373 (397)
48 1f0k_A MURG, UDP-N-acetylgluco 75.3 30 0.001 27.7 11.9 71 96-182 250-322 (364)
49 1u0t_A Inorganic polyphosphate 75.0 4.1 0.00014 33.7 5.2 27 40-67 80-106 (307)
50 2bon_A Lipid kinase; DAG kinas 74.4 8.4 0.00029 32.0 7.0 40 29-69 75-118 (332)
51 4hwg_A UDP-N-acetylglucosamine 73.9 39 0.0013 28.4 11.3 75 83-183 264-340 (385)
52 3rss_A Putative uncharacterize 72.4 14 0.00048 32.9 8.3 102 35-140 244-357 (502)
53 3dhn_A NAD-dependent epimerase 72.1 3.6 0.00012 31.3 3.9 13 1-13 1-13 (227)
54 1v4v_A UDP-N-acetylglucosamine 71.6 4.4 0.00015 33.2 4.6 34 93-137 267-300 (376)
55 2i2c_A Probable inorganic poly 71.5 9.1 0.00031 30.9 6.4 57 5-66 1-67 (272)
56 2gk4_A Conserved hypothetical 71.2 5.8 0.0002 31.8 5.1 70 37-109 5-93 (232)
57 3s2e_A Zinc-containing alcohol 69.8 19 0.00064 29.5 8.1 140 36-181 168-327 (340)
58 2f9f_A First mannosyl transfer 68.1 7.4 0.00025 28.5 4.8 71 94-186 91-163 (177)
59 1pl8_A Human sorbitol dehydrog 67.8 33 0.0011 28.2 9.3 142 36-181 173-339 (356)
60 3g1w_A Sugar ABC transporter; 67.5 42 0.0014 26.2 11.3 39 1-41 1-39 (305)
61 3f6r_A Flavodoxin; FMN binding 67.3 3.9 0.00013 29.4 3.0 33 4-39 1-33 (148)
62 1nns_A L-asparaginase II; amid 66.6 10 0.00035 31.8 5.9 48 100-150 79-131 (326)
63 2zki_A 199AA long hypothetical 66.5 6.8 0.00023 29.4 4.4 34 1-38 1-34 (199)
64 3qwb_A Probable quinone oxidor 65.8 30 0.001 28.1 8.5 142 36-181 150-321 (334)
65 4ffl_A PYLC; amino acid, biosy 65.7 28 0.00097 28.6 8.5 68 39-111 5-74 (363)
66 4e3z_A Putative oxidoreductase 65.2 47 0.0016 25.9 9.8 31 35-66 26-56 (272)
67 3ico_A 6PGL, 6-phosphogluconol 64.7 25 0.00084 28.5 7.7 43 99-142 53-95 (268)
68 2hna_A Protein MIOC, flavodoxi 63.8 10 0.00035 27.1 4.8 34 4-40 1-34 (147)
69 3ip1_A Alcohol dehydrogenase, 63.1 17 0.00059 30.6 6.7 140 36-180 215-384 (404)
70 1g63_A Epidermin modifying enz 62.4 2.8 9.5E-05 32.4 1.4 88 98-186 71-179 (181)
71 3gms_A Putative NADPH:quinone 62.2 16 0.00055 29.9 6.2 33 149-181 287-319 (340)
72 2iw1_A Lipopolysaccharide core 61.9 12 0.00042 30.1 5.4 67 95-183 265-335 (374)
73 3fpc_A NADP-dependent alcohol 61.6 14 0.00049 30.4 5.8 143 36-181 168-339 (352)
74 2cf5_A Atccad5, CAD, cinnamyl 61.5 20 0.0007 29.6 6.8 139 36-181 182-339 (357)
75 3uko_A Alcohol dehydrogenase c 61.1 64 0.0022 26.7 9.9 143 36-181 195-366 (378)
76 2pq6_A UDP-glucuronosyl/UDP-gl 60.9 30 0.001 29.8 8.0 42 85-137 356-398 (482)
77 3r8s_O 50S ribosomal protein L 60.6 15 0.00052 26.3 5.0 40 22-61 67-114 (116)
78 3tx2_A Probable 6-phosphogluco 60.4 37 0.0013 27.1 7.9 44 98-142 36-79 (251)
79 3s2u_A UDP-N-acetylglucosamine 59.4 53 0.0018 27.1 9.0 118 5-141 3-126 (365)
80 1rjw_A ADH-HT, alcohol dehydro 58.3 73 0.0025 25.8 10.1 140 36-181 166-325 (339)
81 3okp_A GDP-mannose-dependent a 57.5 15 0.0005 29.8 5.1 71 92-184 264-343 (394)
82 4amg_A Snogd; transferase, pol 57.4 63 0.0021 26.2 9.1 31 97-137 301-331 (400)
83 2gek_A Phosphatidylinositol ma 57.1 19 0.00066 29.2 5.8 39 2-40 18-56 (406)
84 3oc6_A 6-phosphogluconolactona 56.8 39 0.0013 26.9 7.5 44 98-142 36-79 (248)
85 3jv7_A ADH-A; dehydrogenase, n 56.7 52 0.0018 26.8 8.4 140 36-181 173-334 (345)
86 2g1u_A Hypothetical protein TM 56.5 51 0.0017 23.4 8.9 78 36-115 20-99 (155)
87 3oid_A Enoyl-[acyl-carrier-pro 56.0 36 0.0012 26.6 7.1 58 1-66 1-59 (258)
88 2hcy_A Alcohol dehydrogenase 1 55.5 39 0.0013 27.6 7.5 141 36-181 171-334 (347)
89 3sju_A Keto reductase; short-c 55.0 35 0.0012 27.0 6.9 29 37-66 26-54 (279)
90 3zqu_A Probable aromatic acid 54.6 6.9 0.00024 30.9 2.5 78 101-180 95-183 (209)
91 2d6f_A Glutamyl-tRNA(Gln) amid 54.6 22 0.00074 31.2 5.9 49 100-151 167-220 (435)
92 3nxk_A Cytoplasmic L-asparagin 54.5 24 0.00083 29.7 6.1 49 99-150 87-140 (334)
93 1o7j_A L-asparaginase; atomic 54.2 14 0.00047 31.1 4.4 48 100-150 85-137 (327)
94 2qv7_A Diacylglycerol kinase D 53.7 13 0.00044 30.8 4.2 41 28-69 72-114 (337)
95 1agx_A Glutaminase-asparaginas 53.5 15 0.0005 30.9 4.5 49 100-151 82-135 (331)
96 4pga_A Glutaminase-asparaginas 53.4 15 0.00051 31.1 4.5 48 100-150 90-142 (337)
97 4fu0_A D-alanine--D-alanine li 53.2 8.6 0.00029 32.1 3.0 40 1-41 1-40 (357)
98 4b7c_A Probable oxidoreductase 53.1 57 0.002 26.3 8.1 32 36-68 151-182 (336)
99 2acv_A Triterpene UDP-glucosyl 52.8 29 0.00098 30.0 6.5 101 26-137 264-377 (463)
100 4eg0_A D-alanine--D-alanine li 52.8 19 0.00067 29.1 5.1 43 5-47 14-56 (317)
101 1e3i_A Alcohol dehydrogenase, 52.5 97 0.0033 25.5 10.1 143 36-181 197-366 (376)
102 1jvb_A NAD(H)-dependent alcoho 52.4 27 0.00092 28.6 6.0 32 36-68 172-204 (347)
103 1cdo_A Alcohol dehydrogenase; 52.3 97 0.0033 25.4 9.8 143 36-181 194-364 (374)
104 2c1x_A UDP-glucose flavonoid 3 52.2 29 0.001 29.9 6.4 113 28-155 261-385 (456)
105 2wlt_A L-asparaginase; hydrola 52.0 15 0.00051 30.9 4.3 48 100-150 85-137 (332)
106 2ark_A Flavodoxin; FMN, struct 51.8 11 0.00037 28.3 3.2 34 2-38 2-36 (188)
107 3tqt_A D-alanine--D-alanine li 51.3 10 0.00034 32.2 3.2 41 1-41 1-41 (372)
108 3s40_A Diacylglycerol kinase; 51.1 15 0.00051 30.0 4.2 41 27-69 55-97 (304)
109 3s99_A Basic membrane lipoprot 51.1 65 0.0022 27.0 8.2 42 23-67 195-236 (356)
110 1wls_A L-asparaginase; structu 51.0 21 0.00071 30.0 5.1 51 99-151 72-127 (328)
111 1f0k_A MURG, UDP-N-acetylgluco 50.9 23 0.00079 28.4 5.3 37 1-41 2-39 (364)
112 3qhp_A Type 1 capsular polysac 50.4 12 0.00039 26.7 3.0 68 94-183 68-138 (166)
113 1mvl_A PPC decarboxylase athal 50.3 8.2 0.00028 30.5 2.3 85 97-181 93-195 (209)
114 1ehi_A LMDDL2, D-alanine:D-lac 49.5 19 0.00066 30.2 4.7 40 1-41 1-41 (377)
115 3ot5_A UDP-N-acetylglucosamine 49.2 16 0.00054 31.0 4.1 73 83-181 283-357 (403)
116 1qyc_A Phenylcoumaran benzylic 48.9 13 0.00045 29.4 3.4 33 1-41 1-33 (308)
117 2him_A L-asparaginase 1; hydro 48.8 27 0.00093 29.7 5.5 50 99-150 100-154 (358)
118 1wsa_A Asparaginase, asparagin 48.6 34 0.0012 28.6 6.0 49 100-151 83-136 (330)
119 3r6d_A NAD-dependent epimerase 48.0 60 0.0021 24.2 7.0 28 38-66 8-36 (221)
120 3ff4_A Uncharacterized protein 47.4 12 0.0004 26.8 2.6 34 2-40 2-35 (122)
121 3v2d_S 50S ribosomal protein L 47.3 30 0.001 24.6 4.7 41 21-61 62-110 (112)
122 1id1_A Putative potassium chan 46.8 66 0.0023 22.7 6.8 74 35-111 3-82 (153)
123 1oc2_A DTDP-glucose 4,6-dehydr 46.6 20 0.0007 28.8 4.3 33 1-41 1-35 (348)
124 1nup_A FKSG76; NAD biosynthesi 46.1 40 0.0014 26.8 5.9 36 2-37 3-38 (252)
125 1qzu_A Hypothetical protein MD 46.1 2.6 9E-05 33.2 -1.2 89 97-185 93-199 (206)
126 2qjo_A Bifunctional NMN adenyl 45.9 25 0.00084 28.6 4.7 31 1-31 3-33 (341)
127 3tfo_A Putative 3-oxoacyl-(acy 45.9 63 0.0021 25.4 7.1 56 4-67 4-59 (264)
128 3jyn_A Quinone oxidoreductase; 45.8 50 0.0017 26.6 6.6 142 36-181 142-314 (325)
129 3h7a_A Short chain dehydrogena 45.8 96 0.0033 23.9 8.1 54 5-66 8-61 (252)
130 3ged_A Short-chain dehydrogena 45.7 21 0.00072 28.5 4.1 28 38-66 5-32 (247)
131 2jhf_A Alcohol dehydrogenase E 45.6 1.2E+02 0.0043 24.8 10.0 143 36-181 193-364 (374)
132 4g81_D Putative hexonate dehyd 45.1 54 0.0018 26.2 6.5 44 24-67 21-64 (255)
133 2eih_A Alcohol dehydrogenase; 45.1 1.2E+02 0.004 24.6 8.8 142 36-181 168-331 (343)
134 1hdo_A Biliverdin IX beta redu 45.0 35 0.0012 24.9 5.1 29 38-67 6-34 (206)
135 1zq1_A Glutamyl-tRNA(Gln) amid 44.7 43 0.0015 29.3 6.2 50 100-151 168-222 (438)
136 1jfl_A Aspartate racemase; alp 44.3 40 0.0014 26.0 5.5 42 27-68 65-123 (228)
137 1qyd_A Pinoresinol-lariciresin 44.2 17 0.00058 28.8 3.4 36 1-44 1-36 (313)
138 4ej6_A Putative zinc-binding d 43.8 17 0.00058 30.4 3.4 31 36-68 184-215 (370)
139 1iow_A DD-ligase, DDLB, D-ALA\ 43.7 38 0.0013 26.7 5.4 39 5-43 3-41 (306)
140 1ovy_A 50S ribosomal protein L 43.5 15 0.00052 26.5 2.6 40 21-60 70-117 (120)
141 3m6i_A L-arabinitol 4-dehydrog 43.5 79 0.0027 25.8 7.6 142 36-181 181-349 (363)
142 3bbo_Q Ribosomal protein L18; 43.3 10 0.00034 28.9 1.7 40 22-61 112-159 (161)
143 3dzc_A UDP-N-acetylglucosamine 42.9 1.4E+02 0.0049 24.7 10.7 38 2-44 23-63 (396)
144 3hly_A Flavodoxin-like domain; 42.8 23 0.00078 25.9 3.7 30 6-38 2-31 (161)
145 3j21_O 50S ribosomal protein L 42.6 24 0.00083 27.8 3.9 41 21-61 79-129 (203)
146 2r60_A Glycosyl transferase, g 42.4 41 0.0014 28.5 5.8 43 1-43 4-59 (499)
147 1ydg_A Trp repressor binding p 42.4 39 0.0013 25.4 5.1 34 2-38 4-37 (211)
148 4b79_A PA4098, probable short- 42.0 26 0.00089 28.0 4.1 29 37-66 13-41 (242)
149 1vq8_N 50S ribosomal protein L 41.9 54 0.0018 25.4 5.7 41 21-61 78-128 (187)
150 3enk_A UDP-glucose 4-epimerase 41.9 38 0.0013 27.0 5.2 35 1-43 2-36 (341)
151 4fn4_A Short chain dehydrogena 41.8 24 0.00081 28.3 3.9 40 27-66 22-61 (254)
152 3c48_A Predicted glycosyltrans 41.6 33 0.0011 28.3 4.9 39 2-40 18-63 (438)
153 3qvo_A NMRA family protein; st 41.5 1.1E+02 0.0038 23.0 11.8 74 37-113 25-101 (236)
154 1p3y_1 MRSD protein; flavoprot 41.5 8.3 0.00028 30.0 1.0 85 99-183 80-184 (194)
155 1wv9_A Rhodanese homolog TT165 41.3 31 0.0011 22.5 3.9 26 5-38 54-79 (94)
156 3pfn_A NAD kinase; structural 41.3 79 0.0027 26.9 7.2 63 2-68 36-140 (365)
157 3lab_A Putative KDPG (2-keto-3 41.2 90 0.0031 24.6 7.1 57 2-66 11-69 (217)
158 2a5l_A Trp repressor binding p 41.2 24 0.00083 26.1 3.7 33 4-39 5-37 (200)
159 3ca8_A Protein YDCF; two domai 41.0 22 0.00076 28.9 3.6 37 100-141 36-73 (266)
160 2q5c_A NTRC family transcripti 40.9 45 0.0015 25.5 5.2 56 5-66 95-166 (196)
161 3r5x_A D-alanine--D-alanine li 40.8 10 0.00036 30.3 1.6 40 3-42 2-41 (307)
162 2fzw_A Alcohol dehydrogenase c 40.3 1.2E+02 0.004 24.9 8.1 143 36-181 192-363 (373)
163 1h4x_A SPOIIAA, anti-sigma F f 40.2 33 0.0011 23.1 4.0 59 109-184 58-116 (117)
164 2jjm_A Glycosyl transferase, g 39.7 69 0.0024 25.9 6.6 67 95-182 279-347 (394)
165 3l77_A Short-chain alcohol deh 39.7 96 0.0033 23.3 7.0 34 4-45 2-35 (235)
166 3fbg_A Putative arginate lyase 39.5 66 0.0023 26.2 6.4 32 36-68 152-183 (346)
167 1yqd_A Sinapyl alcohol dehydro 39.5 1.6E+02 0.0054 24.2 9.9 139 36-181 189-346 (366)
168 4fgs_A Probable dehydrogenase 39.4 30 0.001 28.1 4.1 30 36-66 30-59 (273)
169 2i2c_A Probable inorganic poly 39.3 37 0.0013 27.2 4.7 51 100-155 35-93 (272)
170 4e12_A Diketoreductase; oxidor 39.3 44 0.0015 26.6 5.2 32 1-41 1-32 (283)
171 1rq8_A Conserved hypothetical 39.2 19 0.00064 25.3 2.5 55 125-181 12-67 (104)
172 1qor_A Quinone oxidoreductase; 38.8 99 0.0034 24.8 7.3 32 36-68 142-173 (327)
173 3rkr_A Short chain oxidoreduct 38.4 92 0.0031 24.0 6.9 30 36-66 30-59 (262)
174 3i12_A D-alanine-D-alanine lig 38.3 21 0.0007 29.8 3.1 40 1-41 1-40 (364)
175 4gkb_A 3-oxoacyl-[acyl-carrier 37.8 30 0.001 27.7 3.9 39 27-66 22-60 (258)
176 2gdz_A NAD+-dependent 15-hydro 37.7 47 0.0016 25.8 5.0 31 5-43 8-38 (267)
177 3s8m_A Enoyl-ACP reductase; ro 37.7 29 0.00098 30.3 4.0 29 37-66 63-92 (422)
178 3fro_A GLGA glycogen synthase; 37.5 46 0.0016 27.1 5.1 38 3-40 1-39 (439)
179 3llv_A Exopolyphosphatase-rela 37.4 99 0.0034 21.2 7.5 30 36-67 7-36 (141)
180 1hdo_A Biliverdin IX beta redu 37.3 1.1E+02 0.0039 21.9 8.7 36 1-45 1-36 (206)
181 2bfw_A GLGA glycogen synthase; 37.2 36 0.0012 24.7 4.1 67 95-183 110-178 (200)
182 3guy_A Short-chain dehydrogena 37.1 34 0.0012 26.0 4.0 28 38-66 4-31 (230)
183 2qjt_B Nicotinamide-nucleotide 36.7 33 0.0011 28.0 4.1 31 1-31 3-33 (352)
184 2qv7_A Diacylglycerol kinase D 36.7 22 0.00077 29.3 3.0 32 104-138 83-114 (337)
185 3r6d_A NAD-dependent epimerase 36.6 45 0.0015 24.9 4.6 36 2-45 2-39 (221)
186 3l6e_A Oxidoreductase, short-c 36.5 37 0.0013 26.1 4.1 28 38-66 6-33 (235)
187 3h7a_A Short chain dehydrogena 36.3 37 0.0013 26.4 4.1 31 36-67 8-38 (252)
188 3afo_A NADH kinase POS5; alpha 36.3 67 0.0023 27.5 6.0 62 2-67 39-146 (388)
189 1f4p_A Flavodoxin; electron tr 36.2 23 0.00079 25.0 2.7 31 6-39 2-32 (147)
190 3llo_A Prestin; STAS domain, c 36.0 74 0.0025 22.3 5.5 61 110-182 81-141 (143)
191 1e4e_A Vancomycin/teicoplanin 36.0 24 0.00081 28.9 3.1 40 1-41 1-40 (343)
192 2i87_A D-alanine-D-alanine lig 36.0 19 0.00064 29.9 2.4 41 1-42 1-41 (364)
193 3uxy_A Short-chain dehydrogena 35.6 58 0.002 25.6 5.3 30 36-66 29-58 (266)
194 4h15_A Short chain alcohol deh 35.6 31 0.0011 27.5 3.7 29 37-66 13-41 (261)
195 3dii_A Short-chain dehydrogena 35.5 39 0.0013 26.1 4.1 29 37-66 4-32 (247)
196 2yxb_A Coenzyme B12-dependent 35.4 79 0.0027 23.2 5.7 59 4-67 18-76 (161)
197 4hyl_A Stage II sporulation pr 35.3 45 0.0015 22.5 4.1 57 109-181 58-114 (117)
198 3b6i_A Flavoprotein WRBA; flav 35.3 29 0.00099 25.6 3.3 32 4-38 1-33 (198)
199 3orf_A Dihydropteridine reduct 35.2 39 0.0013 26.1 4.1 30 37-67 24-53 (251)
200 3tsc_A Putative oxidoreductase 35.1 39 0.0013 26.6 4.1 11 169-179 242-252 (277)
201 3fni_A Putative diflavin flavo 35.0 47 0.0016 24.2 4.3 30 128-157 85-115 (159)
202 4hp8_A 2-deoxy-D-gluconate 3-d 35.0 31 0.001 27.7 3.5 55 6-69 10-64 (247)
203 1pqw_A Polyketide synthase; ro 34.9 94 0.0032 22.7 6.2 32 36-68 40-71 (198)
204 3two_A Mannitol dehydrogenase; 34.9 50 0.0017 26.9 4.9 31 36-68 178-208 (348)
205 3rwb_A TPLDH, pyridoxal 4-dehy 34.9 40 0.0014 26.1 4.1 17 27-43 21-37 (247)
206 1req_B Methylmalonyl-COA mutas 34.8 39 0.0013 31.1 4.5 48 18-67 520-567 (637)
207 3ew7_A LMO0794 protein; Q8Y8U8 34.8 55 0.0019 24.1 4.8 14 129-142 146-159 (221)
208 3l49_A ABC sugar (ribose) tran 34.8 1.5E+02 0.0052 22.6 11.9 40 2-43 3-42 (291)
209 3gem_A Short chain dehydrogena 34.7 37 0.0012 26.7 3.9 31 36-67 28-58 (260)
210 3sx2_A Putative 3-ketoacyl-(ac 34.7 40 0.0014 26.4 4.1 9 171-179 245-253 (278)
211 3p19_A BFPVVD8, putative blue 34.5 38 0.0013 26.7 4.0 31 36-67 17-47 (266)
212 3pxx_A Carveol dehydrogenase; 34.4 40 0.0014 26.3 4.1 15 27-41 25-39 (287)
213 3zu3_A Putative reductase YPO4 34.3 35 0.0012 29.6 4.0 28 38-66 50-78 (405)
214 3o26_A Salutaridine reductase; 34.2 33 0.0011 27.0 3.6 30 36-66 13-42 (311)
215 2iuy_A Avigt4, glycosyltransfe 34.2 74 0.0025 25.2 5.8 39 1-40 1-51 (342)
216 3e5n_A D-alanine-D-alanine lig 34.0 26 0.00089 29.6 3.1 40 1-41 20-59 (386)
217 2d8a_A PH0655, probable L-thre 33.7 1.9E+02 0.0064 23.4 8.5 143 36-181 169-337 (348)
218 2fwm_X 2,3-dihydro-2,3-dihydro 33.6 43 0.0015 25.8 4.1 29 37-66 9-37 (250)
219 3u43_A Colicin-E2 immunity pro 33.6 8.5 0.00029 26.7 -0.1 43 138-184 29-76 (94)
220 2h1q_A Hypothetical protein; Z 33.6 67 0.0023 26.1 5.4 69 95-181 181-253 (270)
221 1f0y_A HCDH, L-3-hydroxyacyl-C 33.6 57 0.0019 26.1 5.0 30 2-40 13-42 (302)
222 3f1l_A Uncharacterized oxidore 33.5 39 0.0013 26.2 3.9 29 37-66 14-42 (252)
223 3nyw_A Putative oxidoreductase 33.3 34 0.0012 26.6 3.5 10 171-180 210-219 (250)
224 4imr_A 3-oxoacyl-(acyl-carrier 33.3 34 0.0011 27.1 3.5 29 37-66 35-63 (275)
225 1jo0_A Hypothetical protein HI 33.2 21 0.00071 24.7 1.9 52 128-181 16-68 (98)
226 3se7_A VANA; alpha-beta struct 33.2 28 0.00094 28.7 3.0 37 5-41 4-40 (346)
227 1ykg_A SIR-FP, sulfite reducta 33.2 14 0.00046 27.3 1.0 32 3-37 8-39 (167)
228 3tpc_A Short chain alcohol deh 33.1 44 0.0015 25.8 4.1 29 37-66 9-37 (257)
229 3oy2_A Glycosyltransferase B73 33.1 64 0.0022 26.3 5.3 77 92-185 265-355 (413)
230 4eso_A Putative oxidoreductase 33.1 44 0.0015 26.0 4.1 28 38-66 11-38 (255)
231 4g81_D Putative hexonate dehyd 33.0 29 0.00098 27.8 3.0 29 37-66 11-39 (255)
232 1iy8_A Levodione reductase; ox 32.9 44 0.0015 26.0 4.1 15 27-41 28-42 (267)
233 3uve_A Carveol dehydrogenase ( 32.9 44 0.0015 26.3 4.1 29 37-66 13-41 (286)
234 1pfk_A Phosphofructokinase; tr 32.9 36 0.0012 28.5 3.7 54 8-66 67-123 (320)
235 4e6p_A Probable sorbitol dehyd 32.8 45 0.0015 25.9 4.1 18 26-43 22-39 (259)
236 2kln_A Probable sulphate-trans 32.8 1.2E+02 0.004 20.9 6.0 60 109-181 64-123 (130)
237 3v2g_A 3-oxoacyl-[acyl-carrier 32.8 44 0.0015 26.3 4.1 30 36-66 32-61 (271)
238 3uf0_A Short-chain dehydrogena 32.8 44 0.0015 26.4 4.1 29 37-66 33-61 (273)
239 3t7c_A Carveol dehydrogenase; 32.7 44 0.0015 26.7 4.1 29 37-66 30-58 (299)
240 1fjh_A 3alpha-hydroxysteroid d 32.7 46 0.0016 25.5 4.1 27 39-66 5-31 (257)
241 3op4_A 3-oxoacyl-[acyl-carrier 32.6 38 0.0013 26.2 3.7 15 27-41 24-38 (248)
242 1th8_B Anti-sigma F factor ant 32.6 52 0.0018 21.8 4.0 57 109-181 59-115 (116)
243 2iuy_A Avigt4, glycosyltransfe 32.6 1.4E+02 0.0048 23.5 7.2 67 95-183 226-306 (342)
244 4imr_A 3-oxoacyl-(acyl-carrier 32.6 1.3E+02 0.0043 23.6 6.9 55 5-67 34-88 (275)
245 2ew8_A (S)-1-phenylethanol deh 32.5 46 0.0016 25.6 4.1 17 27-43 22-38 (249)
246 3tl3_A Short-chain type dehydr 32.5 39 0.0013 26.1 3.7 30 36-66 10-39 (257)
247 4da9_A Short-chain dehydrogena 32.4 45 0.0015 26.4 4.1 10 171-180 245-254 (280)
248 3h2s_A Putative NADH-flavin re 32.4 64 0.0022 23.9 4.9 27 39-66 4-30 (224)
249 3s40_A Diacylglycerol kinase; 32.4 27 0.00094 28.4 2.9 34 101-138 64-97 (304)
250 1hdc_A 3-alpha, 20 beta-hydrox 32.3 46 0.0016 25.8 4.1 10 171-180 212-221 (254)
251 3zv4_A CIS-2,3-dihydrobiphenyl 32.3 45 0.0016 26.3 4.1 28 38-66 8-35 (281)
252 3l6u_A ABC-type sugar transpor 32.2 1.7E+02 0.0057 22.3 11.5 37 3-41 7-43 (293)
253 3d7n_A Flavodoxin, WRBA-like p 32.1 12 0.00041 28.3 0.5 32 2-36 4-35 (193)
254 3asu_A Short-chain dehydrogena 32.1 41 0.0014 26.0 3.8 18 27-44 15-32 (248)
255 3vtz_A Glucose 1-dehydrogenase 31.9 36 0.0012 26.8 3.4 30 36-66 15-44 (269)
256 3osu_A 3-oxoacyl-[acyl-carrier 31.8 1.6E+02 0.0053 22.4 7.2 55 4-66 4-59 (246)
257 1dhr_A Dihydropteridine reduct 31.8 48 0.0016 25.3 4.1 30 36-66 8-37 (241)
258 3ucx_A Short chain dehydrogena 31.8 57 0.002 25.4 4.6 41 26-66 25-65 (264)
259 3hno_A Pyrophosphate-dependent 31.7 45 0.0015 29.0 4.2 54 9-66 75-139 (419)
260 3c48_A Predicted glycosyltrans 31.7 90 0.0031 25.6 6.1 70 92-182 317-388 (438)
261 3ppi_A 3-hydroxyacyl-COA dehyd 31.7 47 0.0016 26.0 4.1 29 37-66 32-60 (281)
262 2dtx_A Glucose 1-dehydrogenase 31.6 48 0.0016 25.9 4.1 29 37-66 10-38 (264)
263 3qlj_A Short chain dehydrogena 31.6 2E+02 0.0067 23.0 8.4 58 1-66 22-91 (322)
264 2ekp_A 2-deoxy-D-gluconate 3-d 31.6 49 0.0017 25.2 4.1 32 5-44 3-34 (239)
265 3v2h_A D-beta-hydroxybutyrate 31.6 47 0.0016 26.3 4.1 28 38-66 28-55 (281)
266 3sju_A Keto reductase; short-c 31.6 48 0.0016 26.2 4.1 59 2-68 22-80 (279)
267 1uls_A Putative 3-oxoacyl-acyl 31.5 49 0.0017 25.4 4.1 28 38-66 8-35 (245)
268 3npg_A Uncharacterized DUF364 31.5 76 0.0026 25.4 5.3 69 96-181 160-232 (249)
269 1w5f_A Cell division protein F 31.4 96 0.0033 26.2 6.2 55 14-68 80-143 (353)
270 3p0r_A Azoreductase; structura 31.4 76 0.0026 24.2 5.2 37 3-39 3-42 (211)
271 3a28_C L-2.3-butanediol dehydr 31.3 46 0.0016 25.8 3.9 19 26-44 16-34 (258)
272 3lf2_A Short chain oxidoreduct 31.2 49 0.0017 25.8 4.1 19 26-44 22-40 (265)
273 2k0z_A Uncharacterized protein 31.2 1E+02 0.0034 20.6 5.3 34 4-45 56-91 (110)
274 1zxx_A 6-phosphofructokinase; 31.1 40 0.0014 28.2 3.7 53 9-66 67-122 (319)
275 3v8b_A Putative dehydrogenase, 31.1 49 0.0017 26.3 4.1 30 36-66 29-58 (283)
276 3tfo_A Putative 3-oxoacyl-(acy 31.1 41 0.0014 26.5 3.7 30 36-66 5-34 (264)
277 3ijr_A Oxidoreductase, short c 31.0 49 0.0017 26.3 4.1 30 36-66 48-77 (291)
278 3qiv_A Short-chain dehydrogena 31.0 1.6E+02 0.0055 22.3 7.1 17 27-43 24-40 (253)
279 2b4q_A Rhamnolipids biosynthes 31.0 49 0.0017 26.1 4.1 29 37-66 31-59 (276)
280 3svt_A Short-chain type dehydr 31.0 49 0.0017 26.0 4.1 28 38-66 14-41 (281)
281 3m9w_A D-xylose-binding peripl 31.0 62 0.0021 25.4 4.8 37 4-42 2-38 (313)
282 3okp_A GDP-mannose-dependent a 30.9 26 0.00089 28.2 2.5 45 1-45 1-45 (394)
283 3edm_A Short chain dehydrogena 30.9 50 0.0017 25.7 4.1 25 39-64 12-36 (259)
284 3s55_A Putative short-chain de 30.9 50 0.0017 25.9 4.1 17 26-42 24-40 (281)
285 3u5t_A 3-oxoacyl-[acyl-carrier 30.9 1.8E+02 0.006 22.6 7.5 30 36-66 28-57 (267)
286 3guy_A Short-chain dehydrogena 30.8 50 0.0017 25.0 4.0 34 4-45 1-34 (230)
287 2iya_A OLEI, oleandomycin glyc 30.7 89 0.003 25.8 5.9 39 3-45 11-49 (424)
288 3tzq_B Short-chain type dehydr 30.7 50 0.0017 25.9 4.1 29 37-66 13-41 (271)
289 3ksu_A 3-oxoacyl-acyl carrier 30.7 46 0.0016 26.0 3.9 15 27-41 26-40 (262)
290 3jy6_A Transcriptional regulat 30.7 1.8E+02 0.006 22.1 11.7 42 2-45 5-46 (276)
291 2ag5_A DHRS6, dehydrogenase/re 30.7 43 0.0015 25.7 3.7 28 38-66 9-36 (246)
292 3pgx_A Carveol dehydrogenase; 30.7 50 0.0017 25.9 4.1 9 171-179 247-255 (280)
293 3ai3_A NADPH-sorbose reductase 30.7 51 0.0017 25.5 4.1 33 5-45 8-40 (263)
294 2dkn_A 3-alpha-hydroxysteroid 30.7 65 0.0022 24.3 4.7 19 129-147 174-192 (255)
295 2gdz_A NAD+-dependent 15-hydro 30.7 51 0.0017 25.6 4.1 30 37-67 9-38 (267)
296 2dq4_A L-threonine 3-dehydroge 30.6 2.1E+02 0.0072 23.0 9.2 142 36-181 166-331 (343)
297 3ioy_A Short-chain dehydrogena 30.6 58 0.002 26.4 4.6 56 5-68 9-66 (319)
298 3f9i_A 3-oxoacyl-[acyl-carrier 30.6 37 0.0013 26.0 3.2 28 38-66 17-44 (249)
299 2wm3_A NMRA-like family domain 30.6 54 0.0018 25.7 4.3 36 1-44 2-38 (299)
300 1zmo_A Halohydrin dehalogenase 30.6 39 0.0013 26.0 3.4 16 27-42 16-31 (244)
301 3uf0_A Short-chain dehydrogena 30.5 1.9E+02 0.0066 22.5 7.9 55 5-68 32-86 (273)
302 3ou5_A Serine hydroxymethyltra 30.5 28 0.00095 31.1 2.7 44 22-65 341-394 (490)
303 3ak4_A NADH-dependent quinucli 30.4 52 0.0018 25.5 4.1 16 27-42 27-42 (263)
304 1wma_A Carbonyl reductase [NAD 30.4 1.1E+02 0.0039 23.1 6.1 58 1-66 1-59 (276)
305 4fc7_A Peroxisomal 2,4-dienoyl 30.4 46 0.0016 26.2 3.8 27 38-65 30-56 (277)
306 1eiw_A Hypothetical protein MT 30.4 39 0.0013 23.7 3.0 66 99-182 37-107 (111)
307 2ae2_A Protein (tropinone redu 30.4 52 0.0018 25.4 4.1 33 5-45 10-42 (260)
308 4dqx_A Probable oxidoreductase 30.4 51 0.0017 26.1 4.1 29 37-66 29-57 (277)
309 3ucx_A Short chain dehydrogena 30.4 1.3E+02 0.0043 23.3 6.5 31 36-67 12-42 (264)
310 1o5i_A 3-oxoacyl-(acyl carrier 30.3 48 0.0016 25.6 3.9 9 171-179 214-222 (249)
311 2rhc_B Actinorhodin polyketide 30.2 1.8E+02 0.0062 22.6 7.4 33 5-45 23-55 (277)
312 4ffl_A PYLC; amino acid, biosy 30.2 62 0.0021 26.4 4.7 29 4-41 1-29 (363)
313 3r1i_A Short-chain type dehydr 30.1 1.6E+02 0.0054 23.1 7.1 29 37-66 34-62 (276)
314 2d1y_A Hypothetical protein TT 30.1 53 0.0018 25.4 4.1 16 27-42 21-36 (256)
315 3gqv_A Enoyl reductase; medium 30.1 1.5E+02 0.0052 24.3 7.2 82 37-121 167-252 (371)
316 3gvc_A Oxidoreductase, probabl 30.0 49 0.0017 26.2 3.9 29 37-66 31-59 (277)
317 2nwq_A Probable short-chain de 30.0 47 0.0016 26.3 3.8 29 37-66 23-51 (272)
318 3e03_A Short chain dehydrogena 30.0 53 0.0018 25.8 4.1 28 38-66 9-36 (274)
319 3mcu_A Dipicolinate synthase, 30.0 18 0.00063 28.4 1.3 81 99-181 83-180 (207)
320 1vl8_A Gluconate 5-dehydrogena 29.9 53 0.0018 25.7 4.1 29 37-66 23-51 (267)
321 1yde_A Retinal dehydrogenase/r 29.9 53 0.0018 25.8 4.1 16 27-42 24-39 (270)
322 3un1_A Probable oxidoreductase 29.8 45 0.0015 26.1 3.7 31 36-67 29-59 (260)
323 3v8b_A Putative dehydrogenase, 29.8 1.6E+02 0.0053 23.2 7.0 55 5-67 29-83 (283)
324 3tjr_A Short chain dehydrogena 29.7 1.7E+02 0.006 23.1 7.4 55 5-67 32-86 (301)
325 3ksm_A ABC-type sugar transpor 29.6 70 0.0024 24.2 4.7 38 96-138 54-92 (276)
326 3i1j_A Oxidoreductase, short c 29.6 42 0.0014 25.6 3.4 29 37-66 16-44 (247)
327 3ftp_A 3-oxoacyl-[acyl-carrier 29.6 42 0.0014 26.4 3.5 29 37-66 30-58 (270)
328 3qy9_A DHPR, dihydrodipicolina 29.5 86 0.0029 24.9 5.3 9 4-12 3-11 (243)
329 2qq5_A DHRS1, dehydrogenase/re 29.5 46 0.0016 25.8 3.7 17 27-43 20-36 (260)
330 2a4k_A 3-oxoacyl-[acyl carrier 29.5 55 0.0019 25.6 4.1 26 39-65 10-35 (263)
331 3m1a_A Putative dehydrogenase; 29.5 43 0.0015 26.2 3.5 27 39-66 9-35 (281)
332 1kam_A Deamido-NAD(+), nicotin 29.4 57 0.002 24.4 4.1 30 2-31 4-33 (194)
333 1yt5_A Inorganic polyphosphate 29.4 39 0.0013 26.9 3.2 48 100-154 41-95 (258)
334 2x0d_A WSAF; GT4 family, trans 29.4 57 0.0019 27.5 4.4 70 91-182 305-376 (413)
335 2z1n_A Dehydrogenase; reductas 29.3 56 0.0019 25.3 4.1 19 26-44 21-39 (260)
336 2hy7_A Glucuronosyltransferase 29.3 51 0.0017 27.5 4.1 44 92-137 276-322 (406)
337 2q62_A ARSH; alpha/beta, flavo 29.3 99 0.0034 24.4 5.6 35 4-39 34-68 (247)
338 3rd5_A Mypaa.01249.C; ssgcid, 29.2 55 0.0019 25.8 4.1 28 38-66 19-46 (291)
339 3r1i_A Short-chain type dehydr 29.2 55 0.0019 25.8 4.1 55 5-67 33-87 (276)
340 1z0s_A Probable inorganic poly 29.1 58 0.002 26.6 4.3 54 5-68 30-99 (278)
341 3k1y_A Oxidoreductase; structu 29.1 1E+02 0.0035 23.3 5.5 28 2-30 9-36 (191)
342 4fn4_A Short chain dehydrogena 29.0 1.6E+02 0.0056 23.2 7.0 30 36-66 8-37 (254)
343 3lwb_A D-alanine--D-alanine li 29.0 37 0.0013 28.5 3.2 39 3-41 9-47 (373)
344 1geg_A Acetoin reductase; SDR 29.0 57 0.0019 25.1 4.1 54 5-66 3-56 (256)
345 1mxh_A Pteridine reductase 2; 29.0 44 0.0015 26.0 3.5 29 37-66 13-41 (276)
346 2zat_A Dehydrogenase/reductase 29.0 48 0.0016 25.6 3.7 29 37-66 16-44 (260)
347 2pd6_A Estradiol 17-beta-dehyd 29.0 52 0.0018 25.2 3.9 9 171-179 225-233 (264)
348 2rhc_B Actinorhodin polyketide 29.0 56 0.0019 25.7 4.1 30 36-66 23-52 (277)
349 1fjh_A 3alpha-hydroxysteroid d 29.0 75 0.0026 24.2 4.8 33 4-44 1-33 (257)
350 2xij_A Methylmalonyl-COA mutas 28.9 96 0.0033 29.2 6.1 46 21-67 617-662 (762)
351 1oi7_A Succinyl-COA synthetase 28.9 1.4E+02 0.0047 24.2 6.6 86 89-181 186-285 (288)
352 3pxx_A Carveol dehydrogenase; 28.9 2E+02 0.0068 22.1 7.4 30 36-66 11-40 (287)
353 2ij9_A Uridylate kinase; struc 28.9 53 0.0018 25.1 3.8 41 5-45 2-43 (219)
354 1ooe_A Dihydropteridine reduct 28.9 48 0.0016 25.2 3.6 29 37-66 5-33 (236)
355 2jah_A Clavulanic acid dehydro 28.9 1.7E+02 0.0059 22.2 7.0 33 5-45 8-40 (247)
356 3r6w_A FMN-dependent NADH-azor 28.8 71 0.0024 24.1 4.6 32 4-35 1-32 (212)
357 2wsb_A Galactitol dehydrogenas 28.8 53 0.0018 25.0 3.9 33 5-45 12-44 (254)
358 2gek_A Phosphatidylinositol ma 28.8 83 0.0028 25.3 5.3 68 94-182 276-346 (406)
359 3uce_A Dehydrogenase; rossmann 28.7 40 0.0014 25.5 3.1 28 38-66 9-36 (223)
360 1u0t_A Inorganic polyphosphate 28.6 69 0.0024 26.1 4.7 126 1-157 1-133 (307)
361 3is3_A 17BETA-hydroxysteroid d 28.6 49 0.0017 25.9 3.7 25 39-64 22-46 (270)
362 1g0o_A Trihydroxynaphthalene r 28.5 45 0.0015 26.2 3.5 29 37-66 31-59 (283)
363 3n74_A 3-ketoacyl-(acyl-carrie 28.5 59 0.002 25.0 4.1 28 38-66 12-39 (261)
364 3pk0_A Short-chain dehydrogena 28.5 46 0.0016 26.0 3.5 18 27-44 25-42 (262)
365 2r7k_A 5-formaminoimidazole-4- 28.5 1.1E+02 0.0038 25.6 6.1 50 38-90 21-70 (361)
366 1xu9_A Corticosteroid 11-beta- 28.5 48 0.0016 26.1 3.7 30 36-66 29-58 (286)
367 3u5t_A 3-oxoacyl-[acyl-carrier 28.5 52 0.0018 25.8 3.8 56 5-68 28-84 (267)
368 3l77_A Short-chain alcohol deh 28.5 61 0.0021 24.5 4.1 30 37-67 4-33 (235)
369 1nff_A Putative oxidoreductase 28.4 59 0.002 25.3 4.1 9 171-179 208-216 (260)
370 3k3p_A D-alanine--D-alanine li 28.4 36 0.0012 28.8 3.0 36 6-41 39-74 (383)
371 2fvy_A D-galactose-binding per 28.4 1.1E+02 0.0037 23.6 5.7 36 98-138 57-92 (309)
372 3imf_A Short chain dehydrogena 28.3 47 0.0016 25.8 3.5 26 39-65 10-35 (257)
373 2nm0_A Probable 3-oxacyl-(acyl 28.3 60 0.002 25.3 4.1 30 36-66 22-51 (253)
374 1zem_A Xylitol dehydrogenase; 28.3 60 0.002 25.2 4.1 18 26-43 21-38 (262)
375 3qiv_A Short-chain dehydrogena 28.2 55 0.0019 25.0 3.9 31 36-67 10-40 (253)
376 3gaf_A 7-alpha-hydroxysteroid 28.0 49 0.0017 25.7 3.6 17 27-43 27-43 (256)
377 3oti_A CALG3; calicheamicin, T 28.0 67 0.0023 26.3 4.6 36 2-41 18-53 (398)
378 1zmt_A Haloalcohol dehalogenas 28.0 46 0.0016 25.7 3.4 18 27-44 16-33 (254)
379 1u7z_A Coenzyme A biosynthesis 27.9 55 0.0019 25.9 3.8 30 37-66 10-54 (226)
380 2bgk_A Rhizome secoisolaricire 27.9 61 0.0021 25.0 4.1 29 37-66 18-46 (278)
381 1ae1_A Tropinone reductase-I; 27.9 61 0.0021 25.4 4.1 27 38-65 24-50 (273)
382 2ew2_A 2-dehydropantoate 2-red 27.8 72 0.0025 25.1 4.6 30 3-41 2-31 (316)
383 4dmm_A 3-oxoacyl-[acyl-carrier 27.8 1.4E+02 0.0046 23.3 6.3 54 5-66 29-83 (269)
384 3tjr_A Short chain dehydrogena 27.7 60 0.002 26.0 4.1 31 36-67 32-62 (301)
385 1dhr_A Dihydropteridine reduct 27.7 75 0.0026 24.2 4.6 34 3-44 6-39 (241)
386 3ek2_A Enoyl-(acyl-carrier-pro 27.7 60 0.002 25.0 4.0 29 37-66 16-46 (271)
387 1yo6_A Putative carbonyl reduc 27.6 1.9E+02 0.0064 21.5 9.0 30 37-67 5-36 (250)
388 4dry_A 3-oxoacyl-[acyl-carrier 27.6 48 0.0016 26.3 3.5 30 36-66 34-63 (281)
389 4hs4_A Chromate reductase; tri 27.6 45 0.0015 25.4 3.2 46 94-139 67-118 (199)
390 1r5l_A Alpha-TTP, protein (alp 27.6 1.2E+02 0.0041 23.4 5.8 61 115-180 158-222 (262)
391 3iwh_A Rhodanese-like domain p 27.6 1.1E+02 0.0039 20.4 5.0 30 4-41 56-85 (103)
392 1uzm_A 3-oxoacyl-[acyl-carrier 27.5 49 0.0017 25.5 3.5 29 37-66 17-45 (247)
393 3cky_A 2-hydroxymethyl glutara 27.4 52 0.0018 26.0 3.7 31 1-40 1-31 (301)
394 2xci_A KDO-transferase, 3-deox 27.4 72 0.0024 26.4 4.7 67 95-182 272-343 (374)
395 3oec_A Carveol dehydrogenase ( 27.4 51 0.0017 26.7 3.7 29 37-66 48-76 (317)
396 8abp_A L-arabinose-binding pro 27.3 81 0.0028 24.4 4.8 38 96-138 53-90 (306)
397 2jah_A Clavulanic acid dehydro 27.3 64 0.0022 24.8 4.1 30 36-66 8-37 (247)
398 3hr4_A Nitric oxide synthase, 27.3 28 0.00096 27.5 2.0 22 131-152 158-180 (219)
399 3i4f_A 3-oxoacyl-[acyl-carrier 27.3 50 0.0017 25.5 3.5 18 25-42 20-37 (264)
400 3sc4_A Short chain dehydrogena 27.2 62 0.0021 25.6 4.1 29 37-66 11-39 (285)
401 1hxh_A 3BETA/17BETA-hydroxyste 27.2 50 0.0017 25.5 3.5 17 27-43 21-37 (253)
402 3rih_A Short chain dehydrogena 27.2 49 0.0017 26.6 3.5 29 37-66 43-71 (293)
403 1vej_A Riken cDNA 4931431F19; 27.2 15 0.00051 24.2 0.3 40 148-187 32-73 (74)
404 3e9n_A Putative short-chain de 27.2 57 0.0019 24.9 3.8 10 171-180 202-211 (245)
405 2l8b_A Protein TRAI, DNA helic 27.2 24 0.00083 27.4 1.5 128 8-139 26-158 (189)
406 2o23_A HADH2 protein; HSD17B10 27.2 58 0.002 24.9 3.9 29 37-66 14-42 (265)
407 1iz0_A Quinone oxidoreductase; 27.1 93 0.0032 24.6 5.2 78 36-119 127-206 (302)
408 1wv2_A Thiazole moeity, thiazo 27.1 2.5E+02 0.0087 22.8 10.2 93 24-138 123-217 (265)
409 2x9g_A PTR1, pteridine reducta 27.1 46 0.0016 26.3 3.3 30 36-66 24-53 (288)
410 2bon_A Lipid kinase; DAG kinas 27.1 45 0.0016 27.4 3.3 38 99-138 81-118 (332)
411 1kqn_A Nmnat, nicotinamide mon 27.1 98 0.0034 25.0 5.3 35 2-36 5-39 (279)
412 3rsc_A CALG2; TDP, enediyne, s 27.0 72 0.0025 26.1 4.6 39 3-45 19-57 (415)
413 3ax6_A Phosphoribosylaminoimid 27.0 82 0.0028 25.9 5.0 11 99-109 61-71 (380)
414 3oig_A Enoyl-[acyl-carrier-pro 26.9 80 0.0027 24.3 4.7 29 38-66 10-39 (266)
415 3fro_A GLGA glycogen synthase; 26.9 66 0.0022 26.1 4.3 69 94-184 324-394 (439)
416 1yob_A Flavodoxin 2, flavodoxi 26.8 56 0.0019 24.0 3.5 18 49-66 110-127 (179)
417 2dkn_A 3-alpha-hydroxysteroid 26.8 67 0.0023 24.2 4.1 28 38-66 4-31 (255)
418 3cxt_A Dehydrogenase with diff 26.8 64 0.0022 25.7 4.1 29 37-66 36-64 (291)
419 2pd4_A Enoyl-[acyl-carrier-pro 26.7 79 0.0027 24.7 4.6 28 38-66 9-38 (275)
420 2vzf_A NADH-dependent FMN redu 26.7 89 0.003 23.2 4.8 34 4-38 2-36 (197)
421 4h3k_B RNA polymerase II subun 26.7 76 0.0026 25.1 4.3 35 4-45 25-60 (214)
422 1x1t_A D(-)-3-hydroxybutyrate 26.7 52 0.0018 25.5 3.5 33 5-45 5-37 (260)
423 3zqu_A Probable aromatic acid 26.6 1.1E+02 0.0037 23.8 5.3 35 1-40 1-35 (209)
424 1via_A Shikimate kinase; struc 26.6 27 0.00093 25.3 1.7 33 1-41 1-34 (175)
425 3t6o_A Sulfate transporter/ant 26.6 71 0.0024 21.7 3.9 55 110-180 65-120 (121)
426 3orq_A N5-carboxyaminoimidazol 26.5 1.6E+02 0.0054 24.3 6.7 30 38-69 15-44 (377)
427 1vl1_A 6PGL, 6-phosphogluconol 26.5 1.3E+02 0.0045 23.5 5.9 40 100-142 44-83 (232)
428 3c1o_A Eugenol synthase; pheny 26.5 45 0.0015 26.5 3.1 31 2-40 2-32 (321)
429 3t4x_A Oxidoreductase, short c 26.4 52 0.0018 25.6 3.5 21 25-45 23-43 (267)
430 3vps_A TUNA, NAD-dependent epi 26.4 83 0.0028 24.5 4.7 33 1-41 1-36 (321)
431 1spx_A Short-chain reductase f 26.4 52 0.0018 25.6 3.5 17 27-43 21-37 (278)
432 3e48_A Putative nucleoside-dip 26.4 2.2E+02 0.0075 21.8 12.2 28 38-66 3-31 (289)
433 3k5w_A Carbohydrate kinase; 11 26.4 75 0.0026 28.0 4.7 115 34-180 235-352 (475)
434 1d7o_A Enoyl-[acyl-carrier pro 26.3 79 0.0027 24.9 4.6 29 37-66 10-40 (297)
435 3r3s_A Oxidoreductase; structu 26.3 66 0.0023 25.6 4.1 30 36-66 50-79 (294)
436 3osu_A 3-oxoacyl-[acyl-carrier 26.3 54 0.0018 25.2 3.5 30 37-67 6-35 (246)
437 2z04_A Phosphoribosylaminoimid 26.2 70 0.0024 26.1 4.4 29 4-41 1-29 (365)
438 3lyl_A 3-oxoacyl-(acyl-carrier 26.1 1.9E+02 0.0063 21.8 6.7 54 5-66 6-59 (247)
439 2uvd_A 3-oxoacyl-(acyl-carrier 26.1 54 0.0019 25.1 3.5 20 25-44 17-36 (246)
440 3oid_A Enoyl-[acyl-carrier-pro 26.1 48 0.0016 25.8 3.2 30 36-66 5-34 (258)
441 1xkq_A Short-chain reductase f 26.0 53 0.0018 25.8 3.5 33 5-45 7-39 (280)
442 1xg5_A ARPG836; short chain de 26.0 69 0.0024 25.0 4.1 29 37-66 34-62 (279)
443 1p9o_A Phosphopantothenoylcyst 26.0 2.2E+02 0.0077 23.5 7.4 32 35-66 37-85 (313)
444 4eez_A Alcohol dehydrogenase 1 25.9 84 0.0029 25.4 4.8 140 36-181 165-327 (348)
445 3tox_A Short chain dehydrogena 25.8 1.5E+02 0.0051 23.3 6.2 20 26-45 22-41 (280)
446 3d40_A FOMA protein; fosfomyci 25.8 1.2E+02 0.0042 24.3 5.7 41 5-46 25-76 (286)
447 1yb1_A 17-beta-hydroxysteroid 25.7 70 0.0024 24.9 4.1 31 36-67 32-62 (272)
448 2abw_A PDX2 protein, glutamina 25.7 1.4E+02 0.0049 22.6 5.9 62 1-66 1-86 (227)
449 2fcr_A Flavodoxin; electron tr 25.7 45 0.0015 24.4 2.8 19 48-66 105-123 (173)
450 2q2v_A Beta-D-hydroxybutyrate 25.7 59 0.002 25.0 3.7 52 5-66 5-56 (255)
451 4dyv_A Short-chain dehydrogena 25.6 55 0.0019 25.8 3.5 30 36-66 29-58 (272)
452 3qja_A IGPS, indole-3-glycerol 25.6 2.6E+02 0.0088 22.4 10.4 89 26-137 152-242 (272)
453 1ycd_A Hypothetical 27.3 kDa p 25.6 95 0.0032 23.0 4.8 23 19-41 19-41 (243)
454 2buf_A Acetylglutamate kinase; 25.6 2.2E+02 0.0075 22.9 7.3 38 7-45 30-69 (300)
455 4egf_A L-xylulose reductase; s 25.5 56 0.0019 25.5 3.5 20 26-45 34-53 (266)
456 3doj_A AT3G25530, dehydrogenas 25.5 1E+02 0.0034 24.8 5.2 30 2-40 19-48 (310)
457 3tox_A Short chain dehydrogena 25.4 47 0.0016 26.3 3.1 29 37-66 10-38 (280)
458 1e7w_A Pteridine reductase; di 25.4 55 0.0019 26.0 3.5 18 26-43 23-40 (291)
459 2fp4_B Succinyl-COA ligase [GD 25.4 3.1E+02 0.011 23.2 9.1 73 101-183 318-392 (395)
460 3lyl_A 3-oxoacyl-(acyl-carrier 25.3 61 0.0021 24.6 3.7 31 36-67 6-36 (247)
461 3hno_A Pyrophosphate-dependent 25.3 38 0.0013 29.4 2.6 34 34-67 3-43 (419)
462 1req_A Methylmalonyl-COA mutas 25.3 99 0.0034 28.9 5.5 46 21-67 609-654 (727)
463 3ia7_A CALG4; glycosysltransfe 25.2 1.3E+02 0.0044 24.2 5.8 37 4-44 4-40 (402)
464 1uuf_A YAHK, zinc-type alcohol 25.2 1.6E+02 0.0055 24.2 6.5 31 36-68 196-226 (369)
465 3d3w_A L-xylulose reductase; u 25.2 75 0.0026 24.0 4.1 32 5-44 8-39 (244)
466 3is3_A 17BETA-hydroxysteroid d 25.2 2E+02 0.007 22.1 6.8 56 5-68 19-75 (270)
467 2bkx_A Glucosamine-6-phosphate 25.1 1.7E+02 0.0058 22.4 6.3 41 101-142 28-70 (242)
468 2hpv_A FMN-dependent NADH-azor 24.9 1.1E+02 0.0038 22.6 5.0 33 4-36 1-34 (208)
469 1wcv_1 SOJ, segregation protei 24.8 1.2E+02 0.0041 23.3 5.3 37 2-41 4-40 (257)
470 2p91_A Enoyl-[acyl-carrier-pro 24.8 77 0.0026 24.9 4.3 31 36-67 22-54 (285)
471 3grp_A 3-oxoacyl-(acyl carrier 24.8 62 0.0021 25.4 3.7 27 38-65 30-56 (266)
472 1yxm_A Pecra, peroxisomal tran 24.8 73 0.0025 25.0 4.1 29 37-66 20-48 (303)
473 2nu8_A Succinyl-COA ligase [AD 24.6 1.2E+02 0.0041 24.4 5.5 87 89-182 186-286 (288)
474 2wyu_A Enoyl-[acyl carrier pro 24.6 87 0.003 24.2 4.5 28 38-66 11-40 (261)
475 1oaa_A Sepiapterin reductase; 24.6 63 0.0022 24.9 3.6 28 38-66 9-39 (259)
476 3imf_A Short chain dehydrogena 24.6 1.4E+02 0.0047 23.0 5.6 55 5-67 7-61 (257)
477 3awd_A GOX2181, putative polyo 24.5 70 0.0024 24.4 3.9 33 5-45 14-46 (260)
478 3gaf_A 7-alpha-hydroxysteroid 24.5 1.6E+02 0.0053 22.7 6.0 31 36-67 13-43 (256)
479 3lyu_A Putative hydrogenase; t 24.5 49 0.0017 23.6 2.7 35 28-62 99-133 (142)
480 1xhl_A Short-chain dehydrogena 24.4 59 0.002 26.0 3.5 29 37-66 28-56 (297)
481 3rkr_A Short chain oxidoreduct 24.4 64 0.0022 25.0 3.7 55 5-67 30-84 (262)
482 3lhi_A Putative 6-phosphogluco 24.4 85 0.0029 24.5 4.4 44 96-142 29-72 (232)
483 3u7i_A FMN-dependent NADH-azor 24.4 1.2E+02 0.0043 23.3 5.3 34 2-35 2-37 (223)
484 4f3r_A Phosphopantetheine aden 24.4 58 0.002 24.2 3.2 27 2-28 2-28 (162)
485 4iin_A 3-ketoacyl-acyl carrier 24.3 60 0.0021 25.3 3.5 9 171-179 239-247 (271)
486 3h05_A Uncharacterized protein 24.3 47 0.0016 25.0 2.7 23 4-26 1-23 (177)
487 3rot_A ABC sugar transporter, 24.3 66 0.0023 25.0 3.7 38 96-138 57-94 (297)
488 1h5q_A NADP-dependent mannitol 24.1 65 0.0022 24.6 3.6 18 26-43 28-45 (265)
489 3p9y_A CG14216, LD40846P; phos 24.1 1.1E+02 0.0037 23.9 4.7 34 5-45 10-44 (198)
490 4eue_A Putative reductase CA_C 24.1 60 0.0021 28.0 3.7 30 36-66 61-92 (418)
491 3qxc_A Dethiobiotin synthetase 24.0 1.7E+02 0.0056 23.0 6.1 75 101-181 162-240 (242)
492 1vht_A Dephospho-COA kinase; s 24.0 71 0.0024 23.8 3.8 34 1-42 1-34 (218)
493 3dbi_A Sugar-binding transcrip 24.0 2.6E+02 0.009 21.9 12.2 41 3-43 60-100 (338)
494 1uay_A Type II 3-hydroxyacyl-C 24.0 76 0.0026 23.7 3.9 26 39-65 6-31 (242)
495 2lnd_A De novo designed protei 23.9 1.7E+02 0.0058 19.7 6.5 51 128-183 49-99 (112)
496 3l2b_A Probable manganase-depe 23.9 77 0.0026 24.2 4.0 93 83-181 122-214 (245)
497 1geg_A Acetoin reductase; SDR 23.9 2.4E+02 0.0081 21.4 7.0 29 37-66 4-32 (256)
498 1bvy_F Protein (cytochrome P45 23.9 30 0.001 26.4 1.5 18 48-65 123-140 (191)
499 4dzz_A Plasmid partitioning pr 23.9 90 0.0031 22.7 4.3 35 4-41 1-35 (206)
500 1cyd_A Carbonyl reductase; sho 23.9 83 0.0028 23.7 4.1 33 5-45 8-40 (244)
No 1
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=100.00 E-value=4.7e-59 Score=381.47 Aligned_cols=185 Identities=69% Similarity=1.189 Sum_probs=177.3
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCC
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTV 81 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~ 81 (189)
++|++|||||||+.++++.+++.|++||++||++|++||||||+.|+|+|+++||+++||+||||+|+.+.+.|+.++.+
T Consensus 7 ~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~~~ 86 (216)
T 1ydh_A 7 SRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIEISGETV 86 (216)
T ss_dssp CSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSSCC
T ss_pred CCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCCcEEEEechhcCccccccCCC
Confidence 67889999999999999999999999999999999999999998899999999999999999999999888889999999
Q ss_pred ceEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcc
Q 045940 82 GDVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSS 161 (189)
Q Consensus 82 ~~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~ 161 (189)
++++++++|++||.+|+++||+||++|||+|||+|+||+|||.|++.|+|||+|+|.+|||+++++|+++|+++|||+++
T Consensus 87 ~~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~~ 166 (216)
T 1ydh_A 87 GDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKPG 166 (216)
T ss_dssp SEEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCHH
T ss_pred CcccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCChH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcEEEeCCHHHHHHHhhcCCCCC
Q 045940 162 ARNIVISAKNARDLLQGMEVPNLLP 186 (189)
Q Consensus 162 ~~~~i~~~~~~ee~~~~l~~~~~~~ 186 (189)
+.+.+.+++|++|+++.|++|++.+
T Consensus 167 ~~~~~~~~d~~ee~~~~l~~~~~~~ 191 (216)
T 1ydh_A 167 ARNIVVSAPTAKELMEKMEEYTPSH 191 (216)
T ss_dssp HHTTEEEESSHHHHHHHHHHCC---
T ss_pred HcCeEEEeCCHHHHHHHHHHhcccc
Confidence 9999999999999999999887654
No 2
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=100.00 E-value=9.6e-59 Score=372.40 Aligned_cols=176 Identities=35% Similarity=0.553 Sum_probs=169.8
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCCce
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGD 83 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~ 83 (189)
.++|||||||+ ++++.|++.|++||++||++|+.||||||+.|+|+|+++||+++||+||||+|..+...+.+++.+++
T Consensus 13 ~~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~~~~~ 91 (189)
T 3sbx_A 13 RWTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHGGWTVGVIPKMLVHRELADHDADE 91 (189)
T ss_dssp CCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCTTCSE
T ss_pred CeEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEEcCchhhhcccCCCCCCe
Confidence 37999999999 99999999999999999999999999999889999999999999999999999887777778888889
Q ss_pred EEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcccc
Q 045940 84 VLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSAR 163 (189)
Q Consensus 84 ~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~ 163 (189)
++.+++|++||.+|+++||+||+||||+|||+|+||+|||.|++.|+|||+|+|.+|||+++++|+++|+++|||++++.
T Consensus 92 ~i~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~~ 171 (189)
T 3sbx_A 92 LVVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAM 171 (189)
T ss_dssp EEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHHTTSSCHHHH
T ss_pred eEEcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCCHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeCCHHHHHHHhh
Q 045940 164 NIVISAKNARDLLQGME 180 (189)
Q Consensus 164 ~~i~~~~~~ee~~~~l~ 180 (189)
+.+.+++|+||++++|+
T Consensus 172 ~~i~~~d~~ee~~~~l~ 188 (189)
T 3sbx_A 172 ERLIVVDNLDDALQACA 188 (189)
T ss_dssp HHEEEESSHHHHHHHHC
T ss_pred CeEEEeCCHHHHHHHhc
Confidence 99999999999999885
No 3
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=100.00 E-value=4.4e-58 Score=371.20 Aligned_cols=179 Identities=37% Similarity=0.618 Sum_probs=171.5
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCC
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTV 81 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~ 81 (189)
+++++|||||||+ ++++.|++.|++||++||++|+.||||||+.|+|+|+++||+++||+||||+|..+...+.+++.+
T Consensus 20 ~~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~~~ 98 (199)
T 3qua_A 20 DRQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKGGHTVGVIPKALVHRELADVDA 98 (199)
T ss_dssp -CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCTTS
T ss_pred CCCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEEeCchhhhccccCCCC
Confidence 4568999999999 899999999999999999999999999998899999999999999999999998877778888888
Q ss_pred ceEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcc
Q 045940 82 GDVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSS 161 (189)
Q Consensus 82 ~~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~ 161 (189)
++++++++|++||.+|+++||+||+||||+|||+|+|++|||.|+|.|+|||+|+|.+|||+++++|+++|+++|||+++
T Consensus 99 ~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~ 178 (199)
T 3qua_A 99 AELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPFGHYDGLLTWLRGLVPTGYVSQR 178 (199)
T ss_dssp SEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTSTTHHHHHHHHHTTTTTSSCHH
T ss_pred CeeEEcCCHHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCCccchHHHHHHHHHHHCCCCCHH
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcEEEeCCHHHHHHHhhc
Q 045940 162 ARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 162 ~~~~i~~~~~~ee~~~~l~~ 181 (189)
+.+.+++++|++|+++.|++
T Consensus 179 ~~~~i~~~d~~~e~~~~l~~ 198 (199)
T 3qua_A 179 AMDSLVVVDNVEAALEACAP 198 (199)
T ss_dssp HHHTSEEESSHHHHHHHHSC
T ss_pred HCCeEEEeCCHHHHHHHHhc
Confidence 99999999999999999973
No 4
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=100.00 E-value=4e-58 Score=369.83 Aligned_cols=183 Identities=38% Similarity=0.781 Sum_probs=173.0
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCCce
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGD 83 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~ 83 (189)
|++|||||||+.++++.+++.|++||+.||++|++||||||+.|+|+|+++||+++||+||||+|..+.+.+.+++.+++
T Consensus 1 m~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg~~GiM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~~~~~ 80 (191)
T 1t35_A 1 MKTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTE 80 (191)
T ss_dssp CCEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSE
T ss_pred CCEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCCcccHHHHHHHHHHHcCCeEEEEeCchhcccccccCCCCc
Confidence 57899999999999999999999999999999999999999889999999999999999999999987777777888888
Q ss_pred EEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcccc
Q 045940 84 VLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSAR 163 (189)
Q Consensus 84 ~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~ 163 (189)
.+.+.+|++||++|+++||+||++|||+|||+|+|++|||.|+|+|+|||+++|.+|||+++++|+++|+++||+++++.
T Consensus 81 ~~~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~ 160 (191)
T 1t35_A 81 LIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHL 160 (191)
T ss_dssp EEEESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHH
T ss_pred cccCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEEEeCCHHHHHHHhhcCCCCC
Q 045940 164 NIVISAKNARDLLQGMEVPNLLP 186 (189)
Q Consensus 164 ~~i~~~~~~ee~~~~l~~~~~~~ 186 (189)
+.+.+++||||+++.|++|.+++
T Consensus 161 ~~~~~~~~~~e~~~~l~~~~~~~ 183 (191)
T 1t35_A 161 KLIHSSSRPDELIEQMQNYSYPI 183 (191)
T ss_dssp HHEEEESSHHHHHHHHHTC----
T ss_pred CeEEEeCCHHHHHHHHHHhcCCc
Confidence 99999999999999999988655
No 5
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=100.00 E-value=3.7e-57 Score=370.07 Aligned_cols=186 Identities=63% Similarity=1.123 Sum_probs=167.1
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCC
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTV 81 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~ 81 (189)
++|++|||||||+...++.|++.|++||+.||++|+.||||||+.|+|+|+++||+++||+||||+|..+.+.+..++.+
T Consensus 11 ~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~~GiM~aa~~gAl~~GG~tiGVlP~~~~~~e~~~~~~ 90 (215)
T 2a33_A 11 SKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTLMPRELTGETV 90 (215)
T ss_dssp CSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEESSCC--------C
T ss_pred CCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCChhhHhHHHHHHHHHcCCcEEEEcchHhcchhhccCCC
Confidence 57889999999998888889999999999999999999999997799999999999999999999999887777778888
Q ss_pred ceEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcc
Q 045940 82 GDVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSS 161 (189)
Q Consensus 82 ~~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~ 161 (189)
++++++++|++||++|+++||+||++|||+|||+|+||+|||.|++.|+|||+|+|.+|||++|++|+++|+++|||+++
T Consensus 91 ~~~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gfi~~~ 170 (215)
T 2a33_A 91 GEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGFISPT 170 (215)
T ss_dssp CEEEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTSSCHH
T ss_pred CceeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCCCCHH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccCcEEEeCCHHHHHHHhhcCCCCCC
Q 045940 162 ARNIVISAKNARDLLQGMEVPNLLPS 187 (189)
Q Consensus 162 ~~~~i~~~~~~ee~~~~l~~~~~~~~ 187 (189)
+.+.+.+++||+|+++.|++|++++.
T Consensus 171 ~~~~~~~~d~~ee~~~~l~~~~~~~~ 196 (215)
T 2a33_A 171 AREIIVSAPTAKELVKKLEEYAPCHE 196 (215)
T ss_dssp HHTTEEEESSHHHHHHHHHC------
T ss_pred HCCeEEEeCCHHHHHHHHHHhcCccc
Confidence 99999999999999999999876543
No 6
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=9.6e-53 Score=344.36 Aligned_cols=179 Identities=24% Similarity=0.371 Sum_probs=163.0
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCCce
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGD 83 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~ 83 (189)
+++|||||||+.++++.+++.|++||+.||++|++||||||+ |+|+|+++||+++||+|+||+|+ +...+.+++.+++
T Consensus 37 ~~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGGg~-GiM~aa~~gAl~~gG~~iGV~~~-~P~~~~~~~~~t~ 114 (217)
T 1wek_A 37 VPLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGGGP-GVMEAVNRGAYEAGGVSVGLNIE-LPHEQKPNPYQTH 114 (217)
T ss_dssp SCEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECSCS-HHHHHHHHHHHHTTCCEEEEEEC-CTTCCCCCSCCSE
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh-hHHHHHHHHHHHcCCCEEEEeeC-CcchhhccccCCc
Confidence 469999999999999999999999999999999999999997 99999999999999999999764 2223455566778
Q ss_pred EEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCC-CCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccc
Q 045940 84 VLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGI-HDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSA 162 (189)
Q Consensus 84 ~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~-~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~ 162 (189)
.+.+.+|++||++|+++||+||++|||+|||+|+|++|+|.|+|. ++|||+++|. +||+++++|+++|+++||+++++
T Consensus 115 ~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~-~~w~~l~~~l~~~~~~Gfi~~~~ 193 (217)
T 1wek_A 115 ALSLRYFFVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDR-GYWEGLVRWLAFLRDQKAVGPED 193 (217)
T ss_dssp EEEESCHHHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECH-HHHHHHHHHHHHHHHTTSSCTTG
T ss_pred CcccCCHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCc-ccchhHHHHHHHHHHCCCCCHHH
Confidence 888999999999999999999999999999999999999999996 6799999998 59999999999999999999999
Q ss_pred cCcEEEeCCHHHHHHHhhcCCCC
Q 045940 163 RNIVISAKNARDLLQGMEVPNLL 185 (189)
Q Consensus 163 ~~~i~~~~~~ee~~~~l~~~~~~ 185 (189)
.+.+.+++||+|+++.|++++++
T Consensus 194 ~~~~~~~~~~~e~~~~l~~~~~~ 216 (217)
T 1wek_A 194 LQLFRLTDEPEEVVQALKAEAPP 216 (217)
T ss_dssp GGGSEEESCHHHHHHHHHC----
T ss_pred cCeEEEeCCHHHHHHHHHHhcCC
Confidence 99999999999999999998764
No 7
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=6.2e-52 Score=328.48 Aligned_cols=168 Identities=22% Similarity=0.292 Sum_probs=157.5
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCcccccc-ccCCCCc
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIE-ISGQTVG 82 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e-~~~~~~~ 82 (189)
|++|||||||+.++++.+++.|++||+.||++|++||||||+ |+|+|+++||+++||+|+||+|+.++|.| .+++.++
T Consensus 1 m~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~-GiM~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~~~~~ 79 (171)
T 1weh_A 1 MRLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQ-GGMEALARGVKAKGGLVVGVTAPAFFPERRGPNPFVD 79 (171)
T ss_dssp CEEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSS-THHHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTCS
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh-hHHHHHHHHHHHcCCcEEEEeccccCcccccccCCCc
Confidence 579999999999999999999999999999999999999999 99999999999999999999998767766 4556667
Q ss_pred eEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCC-CCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcc
Q 045940 83 DVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGI-HDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSS 161 (189)
Q Consensus 83 ~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~-~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~ 161 (189)
+.+.+.+|++||++|+++||+||++|||+|||+|+|++|+|.|+++ ++|| +++| |||++++ +++||++++
T Consensus 80 ~~~~~~~f~~Rk~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~--g~~~~l~------~~~gfi~~~ 150 (171)
T 1weh_A 80 LELPAATLPQRIGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD--PYWLGLL------KAHGEIAPE 150 (171)
T ss_dssp EECCCSSHHHHHHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC--GGGGGTC------CCBTTBCHH
T ss_pred eeeecCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC--cchhhhH------hhcCCCChh
Confidence 7888999999999999999999999999999999999999999997 6899 9999 8999987 789999999
Q ss_pred ccCcEEEeCCHHHHHHHhhc
Q 045940 162 ARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 162 ~~~~i~~~~~~ee~~~~l~~ 181 (189)
+.+.+.+++||+|+++.|++
T Consensus 151 ~~~~~~~~~~~~e~~~~l~~ 170 (171)
T 1weh_A 151 DVGLLRVVADEEDLRRFLRS 170 (171)
T ss_dssp HHTTSEECCSHHHHHHHHHT
T ss_pred hcCeEEEeCCHHHHHHHHHh
Confidence 99999999999999999875
No 8
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=100.00 E-value=3.5e-48 Score=340.84 Aligned_cols=176 Identities=23% Similarity=0.341 Sum_probs=161.6
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhc-------CCeEEEEecCccccc
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDG-------GCHVLGVIPKALVPI 74 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~-------gg~viGv~p~~~~~~ 74 (189)
.+.++|||||||+. .++++|+.|++||++||++|+.||||||+ |+|+++++||..+ ||+||||+|..+...
T Consensus 144 ~r~~~IvV~cGSs~-~~p~yye~A~eLGr~LA~~G~~LVtGGG~-GLMeAa~aGA~~a~a~qr~aGG~vIGIiP~~L~~~ 221 (462)
T 3gh1_A 144 GATPNLVVCWGGHS-INEVEYQYTREVGHELGLRELNICTGCGP-GAMEGPMKGAAVGHAKQRYSEYRYLGLTEPSIIAA 221 (462)
T ss_dssp TCCSCEEEEECCSS-CCHHHHHHHHHHHHHHHHTTCEEEECCSS-GGGTHHHHHHHHHHHHTTCTTCCEEEEECTTTTTT
T ss_pred CCCCCEEEEECCCC-CCHHHHHHHHHHHHHHHHCCCEEEeCCcH-HHHHHHHHHHHHhccccccCCCeEEEEccchhhhh
Confidence 46789999999988 58999999999999999999999999997 9999999999886 899999999877777
Q ss_pred cccCCCCceEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcC---CCCCcEEEEeC---CCCchHHHHH
Q 045940 75 EISGQTVGDVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLG---IHDKPVGVLNV---DGYYDSLLRF 148 (189)
Q Consensus 75 e~~~~~~~~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~---~~~kPiill~~---~g~~~~l~~~ 148 (189)
|.+++.+++++++++|++||.+|++.|||||+||||+|||||+||+|||.|++ .|+|||+|+|. +|||++|++|
T Consensus 222 E~~N~~vteliiv~~m~~RK~~mv~~SDAfIaLPGG~GTLEELfE~LTw~qLgtgk~h~kPIVLln~~~~~gYwd~Ll~f 301 (462)
T 3gh1_A 222 EPPNPIVNELVIMPDIEKRLEAFVRMAHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPIVLTGPKQSEAYFRSLDKF 301 (462)
T ss_dssp SCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHH
T ss_pred hccCCCCCeeEEeCCHHHHHHHHHHHCCEEEEcCCCcchHHHHHHHHHHHhcccCcCCCCCEEEEcCCCcccHHHHHHHH
Confidence 77888889999999999999999999999999999999999999999999888 68999999998 7899999999
Q ss_pred HHHHHHcCCCCccccCcEEEeCCHHHHHHHhhcCC
Q 045940 149 FDKGVEEGFIKSSARNIVISAKNARDLLQGMEVPN 183 (189)
Q Consensus 149 l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~~~ 183 (189)
+++++.++ +..+.+.+++||+|+++.|++++
T Consensus 302 L~~~v~eg----~~~~~~iv~DdpeEvl~~i~~~~ 332 (462)
T 3gh1_A 302 ITDTLGEA----ARKHYSIAIDNPAEAARIMSNAM 332 (462)
T ss_dssp HHHHHCGG----GGGGCEEEESCHHHHHHHHHHHH
T ss_pred HHHHhhhh----hhhccEEEcCCHHHHHHHHHHHH
Confidence 99988775 34467789999999999998764
No 9
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=100.00 E-value=9.2e-47 Score=304.19 Aligned_cols=166 Identities=25% Similarity=0.343 Sum_probs=148.5
Q ss_pred CCeEEEEEcCCCCCCCh----HHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccC
Q 045940 3 KFKRVCVFCGSNSGNRK----IFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISG 78 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~~~----~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~ 78 (189)
+|++|||||||+. .++ .+++.|++||+.||++|++|||||+. |+|+|+++||+++||+||||+|.. ...
T Consensus 22 ~m~~IaV~Gss~~-~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg~~-GiM~aa~~gAl~~GG~~iGVlP~e-----~~~ 94 (195)
T 1rcu_A 22 HMKKVVVVGYSGP-VNKSPVSELRDICLELGRTLAKKGYLVFNGGRD-GVMELVSQGVREAGGTVVGILPDE-----EAG 94 (195)
T ss_dssp -CCEEEEEECCSC-TTSTTTGGGHHHHHHHHHHHHHTTCEEEECCSS-HHHHHHHHHHHHTTCCEEEEESTT-----CCC
T ss_pred CCCeEEEEecCCC-CCccccHHHHHHHHHHHHHHHHCCCEEEeCCHH-HHHHHHHHHHHHcCCcEEEEeCCc-----ccC
Confidence 5779999999876 445 89999999999999999999999888 999999999999999999999972 233
Q ss_pred CCCceEEec--CCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcC
Q 045940 79 QTVGDVLIV--SDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEG 156 (189)
Q Consensus 79 ~~~~~~~~~--~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g 156 (189)
+++.++++. .+|++||++|+++||+||++|||+|||+|++++|+ ++|||+++|.+|||+++ +++++++|
T Consensus 95 ~~~~~~~~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~------~~kPV~lln~~g~w~~~---l~~~~~~G 165 (195)
T 1rcu_A 95 NPYLSVAVKTGLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYA------LGKPVILLRGTGGWTDR---ISQVLIDG 165 (195)
T ss_dssp CTTCSEEEECCCCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHH------TTCCEEEETTSCHHHHH---GGGGCBTT
T ss_pred CCCcceeeecCCCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHh------cCCCEEEECCCCccHHH---HHHHHHcC
Confidence 555777665 68999999999999999999999999999999997 78999999999999986 47888898
Q ss_pred -CCCccccCcEEEeCCHHHHHHHhhcCCC
Q 045940 157 -FIKSSARNIVISAKNARDLLQGMEVPNL 184 (189)
Q Consensus 157 -~i~~~~~~~i~~~~~~ee~~~~l~~~~~ 184 (189)
|+++++.+.+.+++||||+++.|++|+.
T Consensus 166 ~fi~~~~~~~i~~~~~~ee~~~~l~~~~~ 194 (195)
T 1rcu_A 166 KYLDNRRIVEIHQAWTVEEAVQIIEQILG 194 (195)
T ss_dssp TBSSTTCCSCEEEESSHHHHHHHHHTC--
T ss_pred CcCCHHHcCeEEEeCCHHHHHHHHHHHhc
Confidence 9999999999999999999999998753
No 10
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=100.00 E-value=9.9e-46 Score=327.13 Aligned_cols=174 Identities=22% Similarity=0.316 Sum_probs=155.4
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhc-------CCeEEEEecCccccc
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDG-------GCHVLGVIPKALVPI 74 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~-------gg~viGv~p~~~~~~ 74 (189)
.++++|||||||+.. ++++|+.|++||++||++|+.||||||+ |+|+++++||..+ ||+||||+|..+...
T Consensus 142 ~~~~~ivVv~GSs~~-~~~~Ye~A~eLGr~LA~~G~~LVtGGG~-GlMEaa~aGA~~a~s~qr~~GG~vIGIiP~~L~~~ 219 (460)
T 3bq9_A 142 QEEPNMVVCWGGHSI-NEIEYKYTKDVGYHIGLRGLNICTGCGP-GAMKGPMKGATIGHAKQRVEGGRYLGLTEPGIIAA 219 (460)
T ss_dssp TCCSCEEEEECCSSC-CHHHHHHHHHHHHHHHHTTCEEEECCSS-GGGTHHHHHHHHHHHHTTCSSCCEEEEECTTTTTT
T ss_pred CCCCCEEEEEcCCCC-CCHHHHHHHHHHHHHHHCCCEEEeCCcH-HHhhHHHhhHHhhcccccCCCCEEEEEeChhhhhh
Confidence 356778887777765 6778899999999999999999999999 9998888888765 999999999988888
Q ss_pred cccCCCCceEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCC---CCCcEEEEe---CCCCchHHHHH
Q 045940 75 EISGQTVGDVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGI---HDKPVGVLN---VDGYYDSLLRF 148 (189)
Q Consensus 75 e~~~~~~~~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~---~~kPiill~---~~g~~~~l~~~ 148 (189)
|.+++.+++++++++|++||.+|++.|||||+||||+|||+|+|++|||.|++. ++|||+|+| .+|||+++++|
T Consensus 220 E~~N~~vtelIiv~~m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~Ll~~ 299 (460)
T 3bq9_A 220 EPPNPIVNELVILPDIEKRLEAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEALDEF 299 (460)
T ss_dssp SCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHHHHH
T ss_pred hhcCCCCCeEEEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHHHHH
Confidence 888888899999999999999999999999999999999999999999999875 899999998 57899999999
Q ss_pred HHHHHHcCCCCccccCcEEEeCCHHHHHHHhhc
Q 045940 149 FDKGVEEGFIKSSARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 149 l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~ 181 (189)
+++++++ ++....+.+++||+|+++.|++
T Consensus 300 l~~~l~~----~~~~~~iiv~ddpeEal~~l~~ 328 (460)
T 3bq9_A 300 IGATIGD----EARQLYKIIIDDPAAVAQHMHA 328 (460)
T ss_dssp HHHHTCT----TGGGGCEEEESCHHHHHHHHHH
T ss_pred HHHHhcc----hhhcCcEEEeCCHHHHHHHHHH
Confidence 9988765 3445667899999999999865
No 11
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=100.00 E-value=8.2e-44 Score=282.94 Aligned_cols=163 Identities=20% Similarity=0.203 Sum_probs=144.7
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCC
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTV 81 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~ 81 (189)
+..++||||||++.++++.+++.|++||+.||++|++|||||+..|+|+++++||+++||+||||+|.. .++.+++.+
T Consensus 11 ~~~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~gG~tigVlP~~--~~~~~~~~~ 88 (176)
T 2iz6_A 11 GRKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGP--DTSEISDAV 88 (176)
T ss_dssp CCCCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHTTCCEEEEECC-------CCTTC
T ss_pred CCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHhHHHHHHHHHcCCEEEEEeCch--hhhhhccCC
Confidence 345799999999978899999999999999999999999999933999999999999999999999976 345667777
Q ss_pred ceEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcc
Q 045940 82 GDVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSS 161 (189)
Q Consensus 82 ~~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~ 161 (189)
++++++.+|++||++|+++||+||++|||+|||+|++++| .++|||+++|. |+ .++||++++
T Consensus 89 ~~~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al------~~~kpV~~l~~---~~---------~~~gfi~~~ 150 (176)
T 2iz6_A 89 DIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALAL------KAKKPVVLLGT---QP---------EAEKFFTSL 150 (176)
T ss_dssp SEEEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHH------HTTCCEEEESC---CH---------HHHHHHHHH
T ss_pred ceeEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHH------HhCCcEEEEcC---cc---------cccccCChh
Confidence 8888999999999999999999999999999999999999 47999999985 76 456788888
Q ss_pred ccCcEEEeCCHHHHHHHhhcCCC
Q 045940 162 ARNIVISAKNARDLLQGMEVPNL 184 (189)
Q Consensus 162 ~~~~i~~~~~~ee~~~~l~~~~~ 184 (189)
..+.+.+++||+|+++.|++++.
T Consensus 151 ~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 151 DAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp CTTTEEEESSHHHHHHHHHHHHH
T ss_pred hcCeEEEcCCHHHHHHHHHHHHH
Confidence 99999999999999999988653
No 12
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=99.54 E-value=2.8e-13 Score=118.49 Aligned_cols=157 Identities=14% Similarity=0.139 Sum_probs=121.0
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCcc---cccc-----
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKAL---VPIE----- 75 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~---~~~e----- 75 (189)
.+.|+|.|+.+. ++.-.+.|++|++.|+++|++||+|+.. |++.++.++|+++| +|+|++..+ +|.+
T Consensus 127 ~~~vAIVGsR~~--s~yG~~~a~~l~~~La~~g~~VVSGlA~-GID~~AH~~AL~~g--TIaVLg~Gld~~YP~~n~~L~ 201 (382)
T 3maj_A 127 RPMIAIVGSRNA--SGAGLKFAGQLAADLGAAGFVVISGLAR-GIDQAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLL 201 (382)
T ss_dssp SCEEEEECCSSC--CHHHHHHHHHHHHHHHHHTCEEEECCCT-THHHHHHHHHTTTC--EEEECSSCTTSCSSGGGHHHH
T ss_pred CceEEEEeCCCC--CHHHHHHHHHHHHHHHHCCcEEEeCCcc-CHHHHHHHHHHhCC--eEEEECCCcCccCCHhhHHHH
Confidence 368999998765 5666899999999999999999999999 99999999999977 999998653 3332
Q ss_pred --c-cCCC-------CceEEecCCHHHHHHHHHHhcCeeEEecCC--cchHHHHHHHHHHHhcCCCCCcEEEEeCCCCch
Q 045940 76 --I-SGQT-------VGDVLIVSDMHERKAEMARRADAFIALPGG--YGTMEELLEMITWSQLGIHDKPVGVLNVDGYYD 143 (189)
Q Consensus 76 --~-~~~~-------~~~~~~~~~~~~R~~~m~~~sda~I~lpGG--~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~ 143 (189)
+ ..+. ..+-....+|..||+++...||++||+-.+ .|||...-.++. .+|||+.+-.. ..+
T Consensus 202 ~~I~~~~G~liSE~ppg~~p~~~~Fp~RNRiIagLS~~vvVvEA~~kSGsliTA~~Ale------~gR~VfavPG~-i~~ 274 (382)
T 3maj_A 202 LDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAAD------QGREVFAVPGS-PLD 274 (382)
T ss_dssp HHHHHTTCEEEECSCTTCCCCTTHHHHHHHHHHHHCSCEEECCCCTTCTHHHHHHHHHH------HTCCEEECCCC-TTC
T ss_pred HHHHHhCCcEEecCCCCCCCCccccHHHHHHHHHhCCceEEEecCCCCcHHHHHHHHHH------hCCcEEEEcCC-CCC
Confidence 1 1111 111122447899999999999999999887 899988887774 68999887432 555
Q ss_pred HHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhhc
Q 045940 144 SLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 144 ~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~ 181 (189)
+.-.-...++++|- ..+.+++++++.|..
T Consensus 275 ~~s~G~n~LI~~GA---------~lv~~~~Dil~~l~~ 303 (382)
T 3maj_A 275 PRAAGTNDLIKQGA---------TLITSASDIVEAVAS 303 (382)
T ss_dssp GGGHHHHHHHHTTC---------EECSSHHHHHHHHTT
T ss_pred cccccHHHHHHCCC---------EEECCHHHHHHHhhh
Confidence 55555667777662 578899999998864
No 13
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=99.50 E-value=7.3e-13 Score=111.85 Aligned_cols=157 Identities=17% Similarity=0.175 Sum_probs=119.8
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccc---cccc----
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALV---PIEI---- 76 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~---~~e~---- 76 (189)
.+.|+|.|+.+. ++.-.+.|+++++.|+ ++++||+|+.. |+..++.++|+++||++|+|++..+. |.+-
T Consensus 106 ~~~vaIVGsR~~--s~yg~~~a~~l~~~La-~~~~VVSGlA~-GID~~AH~~aL~~~g~TIaVl~~Gld~~YP~~n~~L~ 181 (288)
T 3uqz_A 106 FPKVAVVGSRAC--SKQGAKSVEKVIQGLE-NELVIVSGLAK-GIDTAAHMAALQNGGKTIAVIGTGLDVFYPKANKRLQ 181 (288)
T ss_dssp SCEEEEEECTTC--CHHHHHHHHHHHHTTT-TCSEEEECCCT-THHHHHHHHHHHHTCCEEEECSSCTTCCSSGGGHHHH
T ss_pred CCcEEEEcCCCC--CHHHHHHHHHHHHHHh-hhheEecCccc-CHHHHHHHHHHhcCCCEEEEecccccccCchhhHHHH
Confidence 368999998764 6777899999999997 58999999998 99999999999999999999986542 3220
Q ss_pred ----------cCCCCceEEecCCHHHHHHHHHHhcCeeEEecCC--cchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchH
Q 045940 77 ----------SGQTVGDVLIVSDMHERKAEMARRADAFIALPGG--YGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDS 144 (189)
Q Consensus 77 ----------~~~~~~~~~~~~~~~~R~~~m~~~sda~I~lpGG--~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~ 144 (189)
..-+...-.....|..||+++...||++||+--+ .|||.=.-.++. .+|||+.+-. ...++
T Consensus 182 ~~i~~~GlliSE~ppg~~p~~~~Fp~RNRiIagLS~~~vVvEA~~~SGsliTA~~Ale------~gR~VfavPG-~i~~~ 254 (288)
T 3uqz_A 182 DYIGNDHLVLSEYGPGEQPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERAME------EGRDVFAIPG-SILDG 254 (288)
T ss_dssp HHHHHHSEEEESSCTTCCCCTTHHHHHHHHHHHHCSEEEEESCCTTCHHHHHHHHHHH------TTCEEEECCC-CSSSS
T ss_pred HHhcccCcEeeccCCCCCccccccHHHHHHHHHcCCeEEEEecCCCChHHHHHHHHHH------cCCeEEEECC-CCCCc
Confidence 0011122234567899999999999999999876 898876666653 6899987743 24455
Q ss_pred HHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhh
Q 045940 145 LLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGME 180 (189)
Q Consensus 145 l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~ 180 (189)
.-.-...++++|. ..+.+++|+++.+.
T Consensus 255 ~s~G~n~LI~~GA---------~lv~~~~Dil~el~ 281 (288)
T 3uqz_A 255 LSDGCHHLIQEGA---------KLVTSGQDVLAEFE 281 (288)
T ss_dssp TTHHHHHHHHTTC---------EECSSHHHHHHHCC
T ss_pred cchHHHHHHHCCC---------EEECCHHHHHHHhC
Confidence 4455566776663 67889999999885
No 14
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=97.97 E-value=0.00013 Score=56.04 Aligned_cols=96 Identities=17% Similarity=0.148 Sum_probs=68.9
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccC-CCCc-eEEecCCHHHHHHHHHHhcCeeEEec-CCc--c
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISG-QTVG-DVLIVSDMHERKAEMARRADAFIALP-GGY--G 112 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~-~~~~-~~~~~~~~~~R~~~m~~~sda~I~lp-GG~--G 112 (189)
.||+||-. |+..|+-+.|+++|-..-|..|......+-+- ..|. .-....++..|....++.||+.++|- |.. |
T Consensus 10 kIiSGGQT-GvDraALd~A~~~gi~~gGwcP~GR~aEDG~ip~~Y~L~E~~~~~y~~Rt~~NV~DSDgTLI~~~g~lsGG 88 (158)
T 3imk_A 10 KIISGGQT-GADRAALDFAIKHHIPYGGWVPKGRLAEGGRVPETYQLQEMPTSDYSKRTEKNVLDSDGTLIISHGILKGG 88 (158)
T ss_dssp EEECCCCT-THHHHHHHHHHHTTCCEECEECGGGCCTTSSCCTTSCCEECSSCCHHHHHHHHHHTSSEEEEEESSSCCHH
T ss_pred EEeeCCcc-hHHHHHHHHHHHcCCCcceecCCCcccccCCCCccccccccCCCCHHHHHHHhhhhcCeEEEEecCCCCCc
Confidence 48888876 99999999999999999999997654433211 1221 11124678999999999999988777 653 5
Q ss_pred hHHHHHHHHHHHhcCCCCCcEEEEeCCC
Q 045940 113 TMEELLEMITWSQLGIHDKPVGVLNVDG 140 (189)
Q Consensus 113 TL~El~~~~~~~~~~~~~kPiill~~~g 140 (189)
|..=+..+- .|.||+.+++.+.
T Consensus 89 T~lT~~~a~------~~~KP~l~i~l~~ 110 (158)
T 3imk_A 89 SALTEFFAE------QYKKPCLHIDLDR 110 (158)
T ss_dssp HHHHHHHHH------HTTCCEEEEETTT
T ss_pred hHHHHHHHH------HhCCCEEEEeccc
Confidence 543222222 5899999998764
No 15
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=97.93 E-value=0.00045 Score=54.30 Aligned_cols=132 Identities=10% Similarity=0.026 Sum_probs=81.9
Q ss_pred CCeEEEEEcCCCCCC------ChHHHHHH----HHHHHHHHHCCC-eEEEcCCCCChhHHHHHHHHh-----cCCeEEEE
Q 045940 3 KFKRVCVFCGSNSGN------RKIFSDAA----LDLATQLVERKI-NLVYGGGSVGLMGLVSQTIFD-----GGCHVLGV 66 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~------~~~~~~~A----~~lg~~la~~g~-~lv~GGg~~GlM~a~a~ga~~-----~gg~viGv 66 (189)
+|++|+|-|...... ++.....- +.|-+++ +.|+ .+++||.. |+...+++.|++ .+.+.+-|
T Consensus 1 ~m~~i~vTGhR~~~l~if~~~~~~~~~ik~~L~~~l~~l~-~~G~~~~isgga~-G~D~~aae~vl~lk~~y~~i~L~~v 78 (181)
T 2nx2_A 1 SLKVLAITGYKPFELGIFKQDDKALYYIKKAIKNRLIAFL-DEGLEWILISGQL-GVELWAAEAAYDLQEEYPDLKVAVI 78 (181)
T ss_dssp CCCEEEEEECCHHHHTCCSSCCHHHHHHHHHHHHHHHHHH-TTTCCEEEECCCT-THHHHHHHHHHTTTTTCTTCEEEEE
T ss_pred CceEEEEEeCCCccccCccccchHHHHHHHHHHHHHHHHH-hCCCcEEEECCCc-cHHHHHHHHHHHhccccCCceEEEE
Confidence 478999998765431 33332222 2334434 4575 58888877 999999999999 46788888
Q ss_pred ecCccccccccC----------CCCceEEe---c-----CCHHHHHHHHHHhcCeeEEec-CCc--chHHHHHHHHHHHh
Q 045940 67 IPKALVPIEISG----------QTVGDVLI---V-----SDMHERKAEMARRADAFIALP-GGY--GTMEELLEMITWSQ 125 (189)
Q Consensus 67 ~p~~~~~~e~~~----------~~~~~~~~---~-----~~~~~R~~~m~~~sda~I~lp-GG~--GTL~El~~~~~~~~ 125 (189)
+|-...+..+.. ...+.+.. . ..+..|++.|++.||.+|++- |.. ||-.=+-.+-...+
T Consensus 79 ~Pf~~~~~~w~~~~~~~y~~ll~~aD~v~~l~~~~y~~~~~~~~rn~~mvd~sD~liavyDg~~~GgT~~~v~~A~~~~~ 158 (181)
T 2nx2_A 79 TPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYESPLQFKQKNQFFIDKSDGLLLLYDPEKEGSPKYMLGTAEKRRE 158 (181)
T ss_dssp ESSBCTTTTSCHHHHHHHHHHHHHCSEEEESSSSBCCCHHHHHHHHHHHHHHSSEEEEECCTTTCCTTHHHHHHHHHHHH
T ss_pred ecccchhhCCCHHHHHHHHHHHHhCCeEEecccCCCCCHHHHHHHHHHHHHHCCEEEEEEcCCCCCCHHHHHHHHHHhcc
Confidence 984433221110 00112221 1 136799999999999999988 443 67654444432211
Q ss_pred cCCCCCcEEEEeC
Q 045940 126 LGIHDKPVGVLNV 138 (189)
Q Consensus 126 ~~~~~kPiill~~ 138 (189)
.+++|+.+++.
T Consensus 159 --~~~~pv~~I~~ 169 (181)
T 2nx2_A 159 --QDGYPIYFITM 169 (181)
T ss_dssp --HHCCCEEEECH
T ss_pred --ccCCeEEEEcH
Confidence 34799999863
No 16
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=96.47 E-value=0.0036 Score=48.20 Aligned_cols=89 Identities=19% Similarity=0.171 Sum_probs=56.8
Q ss_pred CHHHHHHHHHHhcCeeEEe--c--C---CcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHH-cCCC--
Q 045940 89 DMHERKAEMARRADAFIAL--P--G---GYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVE-EGFI-- 158 (189)
Q Consensus 89 ~~~~R~~~m~~~sda~I~l--p--G---G~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~-~g~i-- 158 (189)
....++...++.||++|++ | | -.||.-|+-.++. .+|||+++..+ + .++.+......+ +|+.
T Consensus 56 ~i~~~d~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~A------lgKPVi~l~~d-~-r~~~~~~~~~~d~~g~~ve 127 (161)
T 2f62_A 56 DIRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAA------LNKMVLTFTSD-R-RNMREKYGSGVDKDNLRVE 127 (161)
T ss_dssp HHHHHHHHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHH------TTCEEEEECSC-C-SCHHHHHTSSBCTTSCBCC
T ss_pred HHHHHHHHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHH------CCCEEEEEEcC-c-hhhhhhccccccccccccc
Confidence 4577888999999999999 4 3 4899999999986 79999998654 2 222211100000 0100
Q ss_pred ---Ccc---ccCcEEEeCCHHHHHHHhhcCCCC
Q 045940 159 ---KSS---ARNIVISAKNARDLLQGMEVPNLL 185 (189)
Q Consensus 159 ---~~~---~~~~i~~~~~~ee~~~~l~~~~~~ 185 (189)
.+. ....+.+++|++++++.|.++...
T Consensus 128 df~~~~NLMl~~~~~~~~~~~~~l~~l~~~~~~ 160 (161)
T 2f62_A 128 GFGLPFNLMLYDGVEVFDSFESAFKYFLANFPS 160 (161)
T ss_dssp CSSCSSCGGGCCSSCEESSHHHHHHHHHHHSCC
T ss_pred ccCCcchhhhhhhheeeCCHHHHHHHHHHhhcC
Confidence 000 011123789999999999876554
No 17
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=96.05 E-value=0.0038 Score=48.03 Aligned_cols=44 Identities=25% Similarity=0.267 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhcCeeEEecC--CcchHHHHHHHHHHHhcCCCCCcEEEEeCC
Q 045940 90 MHERKAEMARRADAFIALPG--GYGTMEELLEMITWSQLGIHDKPVGVLNVD 139 (189)
Q Consensus 90 ~~~R~~~m~~~sda~I~lpG--G~GTL~El~~~~~~~~~~~~~kPiill~~~ 139 (189)
...|...+++.||++|++.+ ..||.-|+-.++. .+|||+++..+
T Consensus 67 i~~~d~~~i~~aD~vva~~~~~d~Gt~~EiGyA~a------lgKPVi~l~~~ 112 (165)
T 2khz_A 67 IHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVA------LGKPILCLFRP 112 (165)
T ss_dssp HHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHH------TCSSEEEEECT
T ss_pred HHHHHHHHHHhCCEEEEECCCCCCCHHHHHHHHHH------CCCEEEEEEcC
Confidence 47888899999999999975 5899999999985 79999988654
No 18
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=95.99 E-value=0.032 Score=42.92 Aligned_cols=88 Identities=19% Similarity=0.144 Sum_probs=56.4
Q ss_pred CHHHHHHHHHHhcCeeEEe-cCC---cchHHHHHHHHHHHhcCCCCCcEEEEeCCCCch------HHHHHHHHHHHcCCC
Q 045940 89 DMHERKAEMARRADAFIAL-PGG---YGTMEELLEMITWSQLGIHDKPVGVLNVDGYYD------SLLRFFDKGVEEGFI 158 (189)
Q Consensus 89 ~~~~R~~~m~~~sda~I~l-pGG---~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~------~l~~~l~~~~~~g~i 158 (189)
....+....++.||++|++ .|. .||.-|+-.++. .+|||+++.++ +.. ..+..+....+..|.
T Consensus 58 ~i~~~D~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a------~gkPVi~~~~D-~R~~g~~~~~~~~~~~~~~e~~f~ 130 (162)
T 3ehd_A 58 MIALADTENVLASDLLVALLDGPTIDAGVASEIGVAYA------KGIPVVALYTD-SRQQGADNHQKLDALNEIAENQFH 130 (162)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSSSCCHHHHHHHHHHHH------TTCCEEEECCC-GGGCCTTCHHHHHHTTSTTCCCSC
T ss_pred HHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHH------CCCEEEEEEcC-cccccCCcchhhhhhHHHhhhhhh
Confidence 4578888889999998886 554 899999999986 78999999664 221 111111111111110
Q ss_pred C------ccccCcEEEeCCHHHHHHHhhcCC
Q 045940 159 K------SSARNIVISAKNARDLLQGMEVPN 183 (189)
Q Consensus 159 ~------~~~~~~i~~~~~~ee~~~~l~~~~ 183 (189)
. .--...=.++.|.+|+++.|+++.
T Consensus 131 ~~N~~~~G~i~~~g~~~~~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 131 YLNLYTVGLIKLNGRVVSSEEDLLEEIKQRL 161 (162)
T ss_dssp CCCHHHHHHHHTTEEEESSHHHHHHHHHHTC
T ss_pred hhhHHHhhhHHhCCeEEeCHHHHHHHHHHHh
Confidence 0 000123378899999999998874
No 19
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=95.60 E-value=0.21 Score=36.92 Aligned_cols=63 Identities=21% Similarity=0.280 Sum_probs=37.1
Q ss_pred HhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeC----CHHH
Q 045940 99 RRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAK----NARD 174 (189)
Q Consensus 99 ~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~----~~ee 174 (189)
..+|+||. .||.+|+.|.. .+++|++++... .+. ....+.+.+.|. -..++ |+++
T Consensus 85 ~~ad~~I~-~~G~~t~~Ea~---------~~G~P~i~~p~~--~~Q-~~na~~l~~~g~--------g~~~~~~~~~~~~ 143 (170)
T 2o6l_A 85 PKTRAFIT-HGGANGIYEAI---------YHGIPMVGIPLF--ADQ-PDNIAHMKARGA--------AVRVDFNTMSSTD 143 (170)
T ss_dssp TTEEEEEE-CCCHHHHHHHH---------HHTCCEEECCCS--TTH-HHHHHHHHTTTS--------EEECCTTTCCHHH
T ss_pred CCcCEEEE-cCCccHHHHHH---------HcCCCEEeccch--hhH-HHHHHHHHHcCC--------eEEeccccCCHHH
Confidence 67888875 67889987764 258999988642 222 222333333332 11222 7788
Q ss_pred HHHHhhcC
Q 045940 175 LLQGMEVP 182 (189)
Q Consensus 175 ~~~~l~~~ 182 (189)
+.+.|.+.
T Consensus 144 l~~~i~~l 151 (170)
T 2o6l_A 144 LLNALKRV 151 (170)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 77777653
No 20
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=93.79 E-value=0.11 Score=39.66 Aligned_cols=44 Identities=16% Similarity=0.039 Sum_probs=37.8
Q ss_pred HHHHHHHHHHhcCeeEEecCC----cchHHHHHHHHHHHhcCCCCCcEEEEeCC
Q 045940 90 MHERKAEMARRADAFIALPGG----YGTMEELLEMITWSQLGIHDKPVGVLNVD 139 (189)
Q Consensus 90 ~~~R~~~m~~~sda~I~lpGG----~GTL~El~~~~~~~~~~~~~kPiill~~~ 139 (189)
...+....++.||++|++.-| .||.-|+-.++. .+|||+++..+
T Consensus 68 I~~~D~~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A------~gkPVv~~~~~ 115 (157)
T 1f8y_A 68 TYNNDLNGIKTNDIMLGVYIPDEEDVGLGMELGYALS------QGKYVLLVIPD 115 (157)
T ss_dssp HHHHHHHHHHTSSEEEEECCGGGCCHHHHHHHHHHHH------TTCEEEEEECG
T ss_pred HHHHhHHHHHhCCEEEEEcCCCCCCccHHHHHHHHHH------CCCeEEEEEcC
Confidence 478888899999999998755 899999999986 78999988654
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=93.09 E-value=0.34 Score=40.89 Aligned_cols=99 Identities=18% Similarity=0.143 Sum_probs=52.7
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHH-HHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCCc
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQL-VERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVG 82 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~l-a~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~ 82 (189)
.+.|.|+|||.. .. ...+...+.-..+ .+.++.++..+|. +-.+...+...+.+..+ -+.
T Consensus 180 ~~~ilv~gGs~g-~~-~~~~~~~~al~~l~~~~~~~vi~~~G~-~~~~~~~~~~~~~~~~~-~v~--------------- 240 (365)
T 3s2u_A 180 RVNLLVLGGSLG-AE-PLNKLLPEALAQVPLEIRPAIRHQAGR-QHAEITAERYRTVAVEA-DVA--------------- 240 (365)
T ss_dssp CCEEEECCTTTT-CS-HHHHHHHHHHHTSCTTTCCEEEEECCT-TTHHHHHHHHHHTTCCC-EEE---------------
T ss_pred CcEEEEECCcCC-cc-ccchhhHHHHHhcccccceEEEEecCc-cccccccceeccccccc-ccc---------------
Confidence 357778877653 22 2333222222222 2345666666666 55555544443333211 011
Q ss_pred eEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 83 DVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 83 ~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
...++|.+ ++..||.+|. -+|.+|+.|+.. .++|+|++.
T Consensus 241 --~f~~dm~~----~l~~aDlvI~-raG~~Tv~E~~a---------~G~P~Ilip 279 (365)
T 3s2u_A 241 --PFISDMAA----AYAWADLVIC-RAGALTVSELTA---------AGLPAFLVP 279 (365)
T ss_dssp --SCCSCHHH----HHHHCSEEEE-CCCHHHHHHHHH---------HTCCEEECC
T ss_pred --cchhhhhh----hhccceEEEe-cCCcchHHHHHH---------hCCCeEEec
Confidence 11245543 5688998775 566899887752 479999875
No 22
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=93.06 E-value=0.22 Score=37.79 Aligned_cols=44 Identities=25% Similarity=0.240 Sum_probs=37.2
Q ss_pred CHHHHHHHHHHhcCeeEEecC--CcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 89 DMHERKAEMARRADAFIALPG--GYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 89 ~~~~R~~~m~~~sda~I~lpG--G~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
....|+..+++.||++|+..- ..||.-|+-.++. .+|||+++-.
T Consensus 57 ~i~~~d~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~a------lgkPV~~l~~ 102 (152)
T 4fyk_A 57 FIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVA------LGKPILCLFR 102 (152)
T ss_dssp HHHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHH------TTCCEEEEEC
T ss_pred HHHHHHHHHHHHCCEEEEeCCCCCCCHHHHHHHHHH------cCCeEEEEEe
Confidence 458899999999999999853 5899999999985 6899998643
No 23
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=92.73 E-value=1 Score=37.53 Aligned_cols=33 Identities=18% Similarity=0.190 Sum_probs=24.2
Q ss_pred HHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 96 EMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 96 ~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
.++..||+|| .+||.+|+-|. +. .++|++++..
T Consensus 304 ~~l~~ad~~v-~~~g~~t~~Ea---~a------~G~P~v~~p~ 336 (412)
T 3otg_A 304 ALLPHVDLVV-HHGGSGTTLGA---LG------AGVPQLSFPW 336 (412)
T ss_dssp HHGGGCSEEE-ESCCHHHHHHH---HH------HTCCEEECCC
T ss_pred HHHhcCcEEE-ECCchHHHHHH---HH------hCCCEEecCC
Confidence 4567899876 67888897665 32 5899998754
No 24
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=92.28 E-value=1 Score=37.75 Aligned_cols=32 Identities=28% Similarity=0.489 Sum_probs=23.3
Q ss_pred HHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 96 EMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 96 ~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
.++..||++| ..||.||+.|.. ..++|++++-
T Consensus 309 ~ll~~ad~~v-~~~G~~t~~Ea~---------~~G~P~v~~p 340 (415)
T 3rsc_A 309 KVLEQATVCV-THGGMGTLMEAL---------YWGRPLVVVP 340 (415)
T ss_dssp HHHHHEEEEE-ESCCHHHHHHHH---------HTTCCEEECC
T ss_pred HHHhhCCEEE-ECCcHHHHHHHH---------HhCCCEEEeC
Confidence 4557799855 678889986653 3789999873
No 25
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=92.18 E-value=2.1 Score=35.36 Aligned_cols=32 Identities=16% Similarity=0.075 Sum_probs=24.2
Q ss_pred HHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 97 MARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 97 m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
+...+|+||. .||.||+.|.. ..++|++++..
T Consensus 276 ~l~~~d~~v~-~~G~~t~~Ea~---------~~G~P~v~~p~ 307 (384)
T 2p6p_A 276 VAPTCDLLVH-HAGGVSTLTGL---------SAGVPQLLIPK 307 (384)
T ss_dssp HGGGCSEEEE-CSCTTHHHHHH---------HTTCCEEECCC
T ss_pred HHhhCCEEEe-CCcHHHHHHHH---------HhCCCEEEccC
Confidence 3488998886 78889986654 37899998864
No 26
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=91.84 E-value=1.5 Score=36.99 Aligned_cols=93 Identities=18% Similarity=0.095 Sum_probs=50.7
Q ss_pred HHHHH-CCCeEEEcCCCCC------hhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEEecCCHHHHHHHHHHhcC
Q 045940 30 TQLVE-RKINLVYGGGSVG------LMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGDVLIVSDMHERKAEMARRAD 102 (189)
Q Consensus 30 ~~la~-~g~~lv~GGg~~G------lM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~~~~~~~~~~R~~~m~~~sd 102 (189)
++|.+ ....+|++|+. + .++.+.++..+.+-+++=++...... . .+....+.+...... ..+ ...+|
T Consensus 231 ~~l~~~~~~v~v~~Gs~-~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~--~-~~~~~~v~~~~~~~~-~~l-l~~~d 304 (416)
T 1rrv_A 231 AFLAAGSPPVHIGFGSS-SGRGIADAAKVAVEAIRAQGRRVILSRGWTELV--L-PDDRDDCFAIDEVNF-QAL-FRRVA 304 (416)
T ss_dssp HHHHSSSCCEEECCTTC-CSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC--C-SCCCTTEEEESSCCH-HHH-GGGSS
T ss_pred HHHhcCCCeEEEecCCC-CccChHHHHHHHHHHHHHCCCeEEEEeCCcccc--c-cCCCCCEEEeccCCh-HHH-hccCC
Confidence 34433 35667777765 4 34455555555555555443222111 1 111112333333332 234 48999
Q ss_pred eeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 103 AFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 103 a~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
+||. .||.||+.|.. .+++|++++..
T Consensus 305 ~~v~-~~G~~t~~Ea~---------~~G~P~i~~p~ 330 (416)
T 1rrv_A 305 AVIH-HGSAGTEHVAT---------RAGVPQLVIPR 330 (416)
T ss_dssp EEEE-CCCHHHHHHHH---------HHTCCEEECCC
T ss_pred EEEe-cCChhHHHHHH---------HcCCCEEEccC
Confidence 9887 78899987775 25899998854
No 27
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=91.80 E-value=2 Score=34.37 Aligned_cols=52 Identities=29% Similarity=0.363 Sum_probs=34.1
Q ss_pred HHH-hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCC-CchHHHHHHHHHHHcCCC
Q 045940 97 MAR-RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDG-YYDSLLRFFDKGVEEGFI 158 (189)
Q Consensus 97 m~~-~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g-~~~~l~~~l~~~~~~g~i 158 (189)
++. .||++|.= ||.||+.|+. ..++|.+++-... ..++=....+.+.+.|..
T Consensus 128 ~l~~~AdlvIsh-aGagTv~Eal---------~~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~ 181 (224)
T 2jzc_A 128 IIRDYSDLVISH-AGTGSILDSL---------RLNKPLIVCVNDSLMDNHQQQIADKFVELGYV 181 (224)
T ss_dssp HHHHHCSCEEES-SCHHHHHHHH---------HTTCCCCEECCSSCCCCHHHHHHHHHHHHSCC
T ss_pred HHHhcCCEEEEC-CcHHHHHHHH---------HhCCCEEEEcCcccccchHHHHHHHHHHCCCE
Confidence 446 88887665 8899997775 3689999884321 234444445567777753
No 28
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=91.78 E-value=1.4 Score=36.29 Aligned_cols=37 Identities=8% Similarity=0.205 Sum_probs=27.8
Q ss_pred cCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 87 VSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 87 ~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
+++|.+ ++..||.+|. +|| +|+.|+. ..++|.+++-.
T Consensus 216 ~~~m~~----~m~~aDlvI~-~gG-~T~~E~~---------~~g~P~i~ip~ 252 (282)
T 3hbm_A 216 HENIAK----LMNESNKLII-SAS-SLVNEAL---------LLKANFKAICY 252 (282)
T ss_dssp CSCHHH----HHHTEEEEEE-ESS-HHHHHHH---------HTTCCEEEECC
T ss_pred HHHHHH----HHHHCCEEEE-CCc-HHHHHHH---------HcCCCEEEEeC
Confidence 456654 4579999999 677 7998775 25899998853
No 29
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=91.43 E-value=3.5 Score=34.68 Aligned_cols=32 Identities=28% Similarity=0.411 Sum_probs=23.9
Q ss_pred HHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 97 MARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 97 m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
++..+|+|| ..||.||+.|.. .+++|++++..
T Consensus 318 ~l~~~d~~v-~~~G~~t~~Ea~---------~~G~P~i~~p~ 349 (424)
T 2iya_A 318 ILTKASAFI-THAGMGSTMEAL---------SNAVPMVAVPQ 349 (424)
T ss_dssp HHTTCSEEE-ECCCHHHHHHHH---------HTTCCEEECCC
T ss_pred HHhhCCEEE-ECCchhHHHHHH---------HcCCCEEEecC
Confidence 567899765 578889986654 37899998853
No 30
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=91.39 E-value=1.6 Score=36.95 Aligned_cols=128 Identities=15% Similarity=0.080 Sum_probs=65.5
Q ss_pred HCCCeEEEcCCC---CChhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEEecCCHHHHHHHHHHhcCeeEEecCC
Q 045940 34 ERKINLVYGGGS---VGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGDVLIVSDMHERKAEMARRADAFIALPGG 110 (189)
Q Consensus 34 ~~g~~lv~GGg~---~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~~~~~~~~~~R~~~m~~~sda~I~lpGG 110 (189)
.....+|++|+. ..++..+.++..+.+-+++=........ . . +....+.+...... ..+ ...+|++| -.||
T Consensus 220 ~~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~-~-~-~~~~~v~~~~~~~~-~~l-l~~~d~~v-~~gG 293 (404)
T 3h4t_A 220 GSPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLG-R-I-DEGDDCLVVGEVNH-QVL-FGRVAAVV-HHGG 293 (404)
T ss_dssp SSCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCC-C-S-SCCTTEEEESSCCH-HHH-GGGSSEEE-ECCC
T ss_pred CCCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCcccc-c-c-cCCCCEEEecCCCH-HHH-HhhCcEEE-ECCc
Confidence 346677877764 2356777776666666655443221111 1 1 11122344444433 334 47788876 5677
Q ss_pred cchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhhcCC
Q 045940 111 YGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGMEVPN 183 (189)
Q Consensus 111 ~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~~~ 183 (189)
.||..|.. .+++|++++-. +.+ =..+.+.+.+.|.-..-..+. -|++++.+.+.+..
T Consensus 294 ~~t~~Eal---------~~GvP~v~~p~--~~d-Q~~na~~~~~~G~g~~l~~~~----~~~~~l~~ai~~ll 350 (404)
T 3h4t_A 294 AGTTTAVT---------RAGAPQVVVPQ--KAD-QPYYAGRVADLGVGVAHDGPT----PTVESLSAALATAL 350 (404)
T ss_dssp HHHHHHHH---------HHTCCEEECCC--STT-HHHHHHHHHHHTSEEECSSSS----CCHHHHHHHHHHHT
T ss_pred HHHHHHHH---------HcCCCEEEcCC--ccc-HHHHHHHHHHCCCEeccCcCC----CCHHHHHHHHHHHh
Confidence 89987664 26899998842 222 222234444444311100010 16777777666543
No 31
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=91.39 E-value=1.2 Score=37.68 Aligned_cols=93 Identities=18% Similarity=0.123 Sum_probs=49.2
Q ss_pred HHHHH-CCCeEEEcCCCCC----hhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEEecCCHHHHHHHHHHhcCee
Q 045940 30 TQLVE-RKINLVYGGGSVG----LMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGDVLIVSDMHERKAEMARRADAF 104 (189)
Q Consensus 30 ~~la~-~g~~lv~GGg~~G----lM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~~~~~~~~~~R~~~m~~~sda~ 104 (189)
++|.+ ....+|++|+. | ..+.+.++..+.+-+++=++..... +. ......+.+...... ..+| ..+|+|
T Consensus 232 ~~l~~~~~~v~v~~Gs~-~~~~~~~~~~~~al~~~~~~~v~~~g~~~~--~~-~~~~~~v~~~~~~~~-~~~l-~~~d~~ 305 (415)
T 1iir_A 232 AFLDAGPPPVYLGFGSL-GAPADAVRVAIDAIRAHGRRVILSRGWADL--VL-PDDGADCFAIGEVNH-QVLF-GRVAAV 305 (415)
T ss_dssp HHHHTSSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTC--CC-SSCGGGEEECSSCCH-HHHG-GGSSEE
T ss_pred HHHhhCCCeEEEeCCCC-CCcHHHHHHHHHHHHHCCCeEEEEeCCCcc--cc-cCCCCCEEEeCcCCh-HHHH-hhCCEE
Confidence 34433 35678888775 4 3445555554555555433222111 11 111112344444443 2344 899998
Q ss_pred EEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 105 IALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 105 I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
|. .||.||+.|.. .+++|++++..
T Consensus 306 v~-~~G~~t~~Ea~---------~~G~P~i~~p~ 329 (415)
T 1iir_A 306 IH-HGGAGTTHVAA---------RAGAPQILLPQ 329 (415)
T ss_dssp EE-CCCHHHHHHHH---------HHTCCEEECCC
T ss_pred Ee-CCChhHHHHHH---------HcCCCEEECCC
Confidence 86 78889987764 25899998854
No 32
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=91.26 E-value=0.48 Score=36.32 Aligned_cols=42 Identities=17% Similarity=0.017 Sum_probs=35.8
Q ss_pred HHHHHHHHHHhcCeeEEe----cCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 90 MHERKAEMARRADAFIAL----PGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 90 ~~~R~~~m~~~sda~I~l----pGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
...+....++.||++|++ .=-.||.-|+-.++. .+|||+++.
T Consensus 71 I~~~D~~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~a------lgKPVv~l~ 116 (167)
T 1s2d_A 71 TYQNDLTGISNATCGVFLYDMDQLDDGSAFXIGFMRA------MHKPVILVP 116 (167)
T ss_dssp HHHHHHHHHHHCSEEEEEEESSSCCHHHHHHHHHHHH------TTCCEEEEE
T ss_pred HHHHHHHHHHhCCEEEEECCCCCCCCCceeehhhHhh------CCCeEEEEE
Confidence 477888889999999996 335999999999986 689999995
No 33
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=89.66 E-value=3.9 Score=33.64 Aligned_cols=32 Identities=19% Similarity=0.244 Sum_probs=23.3
Q ss_pred HHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 96 EMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 96 ~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
.++..||++| ..||.||+.|. + .+++|++++-
T Consensus 293 ~ll~~ad~~v-~~~G~~t~~Ea---~------~~G~P~v~~p 324 (402)
T 3ia7_A 293 SVLAHARACL-THGTTGAVLEA---F------AAGVPLVLVP 324 (402)
T ss_dssp HHHTTEEEEE-ECCCHHHHHHH---H------HTTCCEEECG
T ss_pred HHHhhCCEEE-ECCCHHHHHHH---H------HhCCCEEEeC
Confidence 4557789754 67888998665 3 3789999874
No 34
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=89.40 E-value=1.4 Score=37.64 Aligned_cols=43 Identities=26% Similarity=0.215 Sum_probs=29.1
Q ss_pred EEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 84 VLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 84 ~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
+.+...... ..+ ...+|+||. .||.||+.|.. .+++|++++..
T Consensus 321 v~~~~~~~~-~~l-l~~ad~~V~-~~G~~t~~Ea~---------~~G~P~i~~p~ 363 (441)
T 2yjn_A 321 VRTVGFVPM-HAL-LPTCAATVH-HGGPGSWHTAA---------IHGVPQVILPD 363 (441)
T ss_dssp EEECCSCCH-HHH-GGGCSEEEE-CCCHHHHHHHH---------HTTCCEEECCC
T ss_pred EEEecCCCH-HHH-HhhCCEEEE-CCCHHHHHHHH---------HhCCCEEEeCC
Confidence 334444443 334 488999886 78899986664 37899999854
No 35
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=86.96 E-value=1.3 Score=36.93 Aligned_cols=33 Identities=18% Similarity=0.249 Sum_probs=24.7
Q ss_pred HHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 95 AEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 95 ~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
..++..||+|| ..||.||+.|. + .+++|++++.
T Consensus 295 ~~ll~~ad~~v-~~gG~~t~~Ea---~------~~G~P~v~~p 327 (398)
T 4fzr_A 295 SAIMPACDVVV-HHGGHGTTLTC---L------SEGVPQVSVP 327 (398)
T ss_dssp HHHGGGCSEEE-ECCCHHHHHHH---H------HTTCCEEECC
T ss_pred HHHHhhCCEEE-ecCCHHHHHHH---H------HhCCCEEecC
Confidence 34567799988 57889997655 4 3789999874
No 36
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=84.64 E-value=15 Score=30.66 Aligned_cols=33 Identities=24% Similarity=0.372 Sum_probs=23.7
Q ss_pred HHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 96 EMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 96 ~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
.+...+|+|| ..||.+|+.|. + ..++|+++...
T Consensus 295 ~~l~~ad~~v-~~~G~~t~~Ea---~------~~G~P~i~~p~ 327 (430)
T 2iyf_A 295 AILRQADLFV-THAGAGGSQEG---L------ATATPMIAVPQ 327 (430)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHH---H------HTTCCEEECCC
T ss_pred HHhhccCEEE-ECCCccHHHHH---H------HhCCCEEECCC
Confidence 3567899765 57888887655 4 37899998853
No 37
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=84.34 E-value=14 Score=29.41 Aligned_cols=125 Identities=21% Similarity=0.329 Sum_probs=61.2
Q ss_pred CeEEEE-EcCCCCCCC------h-HHHHHHHHHHHHHHHCCC--eEEEcCCCC---------ChhH--------------
Q 045940 4 FKRVCV-FCGSNSGNR------K-IFSDAALDLATQLVERKI--NLVYGGGSV---------GLMG-------------- 50 (189)
Q Consensus 4 ~~~I~V-~g~s~~~~~------~-~~~~~A~~lg~~la~~g~--~lv~GGg~~---------GlM~-------------- 50 (189)
.++|-| +|||....+ + ...+.|+++.+.. +.|+ .||.|||.. |+-.
T Consensus 9 ~~riViKlGGs~l~~~~~~~~~~~~i~~la~~i~~l~-~~G~~vviV~gGG~~~~~~~~~~~g~~~~~~d~~g~l~t~~N 87 (243)
T 3ek6_A 9 YRRILLKLSGEALMGDGDYGIDPKVINRLAHEVIEAQ-QAGAQVALVIGGGNIFRGAGLAASGMDRVTGDHMGMLATVIN 87 (243)
T ss_dssp CSEEEEEECGGGGTTTSSSSCCHHHHHHHHHHHHHHH-HTTCEEEEEECSTTTSCSTTTSCSSSCHHHHHHHHHHHHHHH
T ss_pred CcEEEEEEchhhccCCCCCCCCHHHHHHHHHHHHHHH-HCCCeEEEEECCCHHHHHHHHHHcCCCCCCHHHHHHHHHHHH
Confidence 455555 566665432 2 2345555555443 3455 578888652 2211
Q ss_pred -HHHHHHH-hcCCeEEEEecCccccccccCCCCceEEecCCH-HHHHHHHHHhcCeeEEecCC---cchHHHHHHHHHHH
Q 045940 51 -LVSQTIF-DGGCHVLGVIPKALVPIEISGQTVGDVLIVSDM-HERKAEMARRADAFIALPGG---YGTMEELLEMITWS 124 (189)
Q Consensus 51 -a~a~ga~-~~gg~viGv~p~~~~~~e~~~~~~~~~~~~~~~-~~R~~~m~~~sda~I~lpGG---~GTL~El~~~~~~~ 124 (189)
.....|+ +.|..++++.+... ...++ ++ ..|-..+.+.....|+-|+. ++|-|.+...++.
T Consensus 88 ~~~l~~al~~~G~~a~~~~~~~~-------~~v~~-----~~~~~~~~~lL~~g~IpVv~~~~g~~~~~~D~~Aa~lA~- 154 (243)
T 3ek6_A 88 ALAMQDALEKLGAKVRVMSAIKI-------NDVCE-----DFIRRRAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRAI- 154 (243)
T ss_dssp HHHHHHHHHHTTCCEEEEESSCB-------TTTBE-----ECCHHHHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHHH-
T ss_pred HHHHHHHHHHcCCCeEEechhhc-------CcccC-----cCCHHHHHHHHHCCcEEEEECCCCCCcCChHHHHHHHHH-
Confidence 1133344 45667888865321 11111 12 23333444444444444432 5777877665542
Q ss_pred hcCCCCCcEEEEeCCCCch
Q 045940 125 QLGIHDKPVGVLNVDGYYD 143 (189)
Q Consensus 125 ~~~~~~kPiill~~~g~~~ 143 (189)
.++ ..+=+++-+.+|.|+
T Consensus 155 ~l~-Ad~li~lTdVdGvy~ 172 (243)
T 3ek6_A 155 EIG-ADLLLKATKVDGVYD 172 (243)
T ss_dssp HHT-CSEEEEECSSSSCBS
T ss_pred HcC-CCEEEEEeCCCccCC
Confidence 121 234444557889886
No 38
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=83.05 E-value=17 Score=29.46 Aligned_cols=65 Identities=12% Similarity=0.092 Sum_probs=37.3
Q ss_pred HHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCH
Q 045940 93 RKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNA 172 (189)
Q Consensus 93 R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ 172 (189)
....+...||++|.-.| ++ +.|++. .++|++..+..|-...+ + +.| .-+.+-.|+
T Consensus 275 ~~~~~~~~ad~~v~~Sg---~~--~lEA~a------~G~PvI~~~~~~~~~e~---v----~~g-------~g~lv~~d~ 329 (384)
T 1vgv_A 275 PFVWLMNHAWLILTDSG---GI--QEEAPS------LGKPVLVMRDTTERPEA---V----TAG-------TVRLVGTDK 329 (384)
T ss_dssp HHHHHHHHCSEEEESSS---TG--GGTGGG------GTCCEEEESSCCSCHHH---H----HHT-------SEEEECSSH
T ss_pred HHHHHHHhCcEEEECCc---ch--HHHHHH------cCCCEEEccCCCCcchh---h----hCC-------ceEEeCCCH
Confidence 34566789999765443 33 456663 78999998752223322 2 111 112232378
Q ss_pred HHHHHHhhcC
Q 045940 173 RDLLQGMEVP 182 (189)
Q Consensus 173 ee~~~~l~~~ 182 (189)
+++.+.|.+.
T Consensus 330 ~~la~~i~~l 339 (384)
T 1vgv_A 330 QRIVEEVTRL 339 (384)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8887777553
No 39
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=82.55 E-value=14 Score=31.18 Aligned_cols=65 Identities=18% Similarity=0.196 Sum_probs=37.5
Q ss_pred HHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCH
Q 045940 93 RKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNA 172 (189)
Q Consensus 93 R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ 172 (189)
....++..||++|.=. | |+. .|+. ..++|+++.+..+-|..+ ++.|. .+.+-+|+
T Consensus 300 ~~~~l~~~ad~vv~~S-G-g~~---~EA~------a~G~PvV~~~~~~~~~e~-------v~~G~-------~~lv~~d~ 354 (396)
T 3dzc_A 300 PFVYLMDRAHIILTDS-G-GIQ---EEAP------SLGKPVLVMRETTERPEA-------VAAGT-------VKLVGTNQ 354 (396)
T ss_dssp HHHHHHHHCSEEEESC-S-GGG---TTGG------GGTCCEEECCSSCSCHHH-------HHHTS-------EEECTTCH
T ss_pred HHHHHHHhcCEEEECC-c-cHH---HHHH------HcCCCEEEccCCCcchHH-------HHcCc-------eEEcCCCH
Confidence 3556789999976544 3 443 3444 368999988443445332 22231 12233468
Q ss_pred HHHHHHhhcC
Q 045940 173 RDLLQGMEVP 182 (189)
Q Consensus 173 ee~~~~l~~~ 182 (189)
+++.+.+.+.
T Consensus 355 ~~l~~ai~~l 364 (396)
T 3dzc_A 355 QQICDALSLL 364 (396)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888777653
No 40
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=81.44 E-value=2.8 Score=34.12 Aligned_cols=61 Identities=20% Similarity=0.187 Sum_probs=40.7
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe------------------------------EEEcCCCCChhHH
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKIN------------------------------LVYGGGSVGLMGL 51 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~------------------------------lv~GGg~~GlM~a 51 (189)
++|++|+|+.-.. ++...+.++++-+.|.++|+. ||.-||. |.+-.
T Consensus 3 ~~mkki~ii~np~---~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~GGD-GT~l~ 78 (292)
T 2an1_A 3 NHFKCIGIVGHPR---HPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGD-GNMLG 78 (292)
T ss_dssp -CCCEEEEECC----------CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSSCCEECHHHHHHHCSEEEECSCH-HHHHH
T ss_pred CcCcEEEEEEcCC---CHHHHHHHHHHHHHHHHCCCEEEEecchhhhcccccccccchhhcccCCCEEEEEcCc-HHHHH
Confidence 4578999997643 233445566777777666653 4456677 99999
Q ss_pred HHHHHHhcCCeEEEE
Q 045940 52 VSQTIFDGGCHVLGV 66 (189)
Q Consensus 52 ~a~ga~~~gg~viGv 66 (189)
++++....+-.++||
T Consensus 79 a~~~~~~~~~P~lGI 93 (292)
T 2an1_A 79 AARTLARYDINVIGI 93 (292)
T ss_dssp HHHHHTTSSCEEEEB
T ss_pred HHHHhhcCCCCEEEE
Confidence 999988777788998
No 41
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=79.70 E-value=1.5 Score=36.11 Aligned_cols=102 Identities=13% Similarity=0.173 Sum_probs=51.4
Q ss_pred HCCCeEEEcCCCCChhHHHH---HHHHhcC-CeEEEEecCccccccccCCCCceEEec-CCHHHH-HHHHHHhcCeeEEe
Q 045940 34 ERKINLVYGGGSVGLMGLVS---QTIFDGG-CHVLGVIPKALVPIEISGQTVGDVLIV-SDMHER-KAEMARRADAFIAL 107 (189)
Q Consensus 34 ~~g~~lv~GGg~~GlM~a~a---~ga~~~g-g~viGv~p~~~~~~e~~~~~~~~~~~~-~~~~~R-~~~m~~~sda~I~l 107 (189)
.+|+.+|-||.. |..+|+. ++|+..| |.|.-+.|....+. -....-|+++. .+.... .....+.+|++++=
T Consensus 29 ~~G~vlvigGs~-~~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~--~~~~~Pe~m~~~~~~~~~~~~~~l~~~davviG 105 (279)
T 3rpz_A 29 TYGTALLLAGSD-DMPGAALLAGLGAMRSGLGKLVIGTSENVIPL--IVPVLPEATYWRDGWKKAADAQLEETYRAIAIG 105 (279)
T ss_dssp GGCEEEEECCBT-TBCHHHHHHHHHHHTTTCSEEEEEECTTTHHH--HTTTCTTCEEEETHHHHTTTSCCSSCCSEEEEC
T ss_pred CCCEEEEEeCCC-CCCcHHHHHHHHHHHhCCCeEEEEecHHHHHH--HHhcCCeeEEccccccchhhHhhccCCCEEEEC
Confidence 369999999986 7777665 5666666 67776677543221 11111233222 111100 00112567777664
Q ss_pred cCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCc
Q 045940 108 PGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYY 142 (189)
Q Consensus 108 pGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~ 142 (189)
-|.|+-++..+.+.. +-...+|+ ++|.++.+
T Consensus 106 -PGlg~~~~~~~~~~~--~l~~~~p~-VlDAdal~ 136 (279)
T 3rpz_A 106 -PGLPQTESVQQAVDH--VLTADCPV-ILDAGALA 136 (279)
T ss_dssp -TTCCCCHHHHHHHHH--HTTSSSCE-EECGGGCC
T ss_pred -CCCCCCHHHHHHHHH--HHhhCCCE-EEECCccc
Confidence 456764443333221 11356787 45666554
No 42
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=79.05 E-value=5.4 Score=33.18 Aligned_cols=32 Identities=22% Similarity=0.244 Sum_probs=23.7
Q ss_pred HHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 96 EMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 96 ~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
.++..||+|| ..||.||+.|.. ..++|++++.
T Consensus 295 ~ll~~ad~~v-~~~G~~t~~Eal---------~~G~P~v~~p 326 (398)
T 3oti_A 295 TLLRTCTAVV-HHGGGGTVMTAI---------DAGIPQLLAP 326 (398)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---------HHTCCEEECC
T ss_pred HHHhhCCEEE-ECCCHHHHHHHH---------HhCCCEEEcC
Confidence 3457799876 688899986654 2589999873
No 43
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=77.79 E-value=3.7 Score=36.53 Aligned_cols=74 Identities=8% Similarity=0.029 Sum_probs=40.0
Q ss_pred cCeeEE--e--cCCcchH-HHHHHHHHHHhcCC-CCCcEEEEe-CCCC---chHHHHHHHHHHHcCCCCccccCcEEEeC
Q 045940 101 ADAFIA--L--PGGYGTM-EELLEMITWSQLGI-HDKPVGVLN-VDGY---YDSLLRFFDKGVEEGFIKSSARNIVISAK 170 (189)
Q Consensus 101 sda~I~--l--pGG~GTL-~El~~~~~~~~~~~-~~kPiill~-~~g~---~~~l~~~l~~~~~~g~i~~~~~~~i~~~~ 170 (189)
.|++++ + |+..-.. +++.+++.-.+-.. .+||++++. ..|. -+...+..+.+.+.| |-.++
T Consensus 329 vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~~~~~~~~~~~L~~aG---------Ip~f~ 399 (480)
T 3dmy_A 329 VRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAG---------IAVVS 399 (480)
T ss_dssp EEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTSTTCHHHHHHHHHHTT---------CEECS
T ss_pred CCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccchhhHHHHHHHHHhCC---------CcccC
Confidence 455555 4 5655443 77777765433221 279953322 1121 122222233344433 78999
Q ss_pred CHHHHHHHhhcCC
Q 045940 171 NARDLLQGMEVPN 183 (189)
Q Consensus 171 ~~ee~~~~l~~~~ 183 (189)
+||++++.+....
T Consensus 400 spe~Av~a~~~l~ 412 (480)
T 3dmy_A 400 SLPEATLLAAALI 412 (480)
T ss_dssp SHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHH
Confidence 9999999887644
No 44
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=77.72 E-value=8.5 Score=33.66 Aligned_cols=42 Identities=14% Similarity=0.211 Sum_probs=28.2
Q ss_pred EecCCHHHHHHHHHHhcC-eeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 85 LIVSDMHERKAEMARRAD-AFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 85 ~~~~~~~~R~~~m~~~sd-a~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
.+++..+. ..+...+| ..++--||+||..|.. .+++|++++-
T Consensus 330 ~vv~w~Pq--~~vL~h~~v~~fvtH~G~~S~~Eal---------~~GvP~i~~P 372 (454)
T 3hbf_A 330 KIVAWAPQ--VEILKHSSVGVFLTHSGWNSVLECI---------VGGVPMISRP 372 (454)
T ss_dssp EEESSCCH--HHHHHSTTEEEEEECCCHHHHHHHH---------HHTCCEEECC
T ss_pred EEEeeCCH--HHHHhhcCcCeEEecCCcchHHHHH---------HcCCCEecCc
Confidence 33444444 23446666 4777789999997774 2689999874
No 45
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=77.42 E-value=26 Score=28.15 Aligned_cols=64 Identities=16% Similarity=0.156 Sum_probs=37.4
Q ss_pred HHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC-CCCchHHHHHHHHHHHcCCCCccccCcEEEeCC
Q 045940 93 RKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV-DGYYDSLLRFFDKGVEEGFIKSSARNIVISAKN 171 (189)
Q Consensus 93 R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~-~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~ 171 (189)
....+...||++|. |. |+. +.|++. .++|++..+. .| ...+ + +.| .-+.+-.|
T Consensus 275 ~~~~~~~~ad~~v~-~s--g~~--~lEA~a------~G~Pvi~~~~~~~-~~e~---v----~~g-------~g~~v~~d 328 (375)
T 3beo_A 275 DFHNVAARSYLMLT-DS--GGV--QEEAPS------LGVPVLVLRDTTE-RPEG---I----EAG-------TLKLAGTD 328 (375)
T ss_dssp HHHHHHHTCSEEEE-CC--HHH--HHHHHH------HTCCEEECSSCCS-CHHH---H----HTT-------SEEECCSC
T ss_pred HHHHHHHhCcEEEE-CC--CCh--HHHHHh------cCCCEEEecCCCC-Ccee---e----cCC-------ceEEcCCC
Confidence 34456688999865 53 444 667774 6899998854 43 3332 2 221 12223257
Q ss_pred HHHHHHHhhcC
Q 045940 172 ARDLLQGMEVP 182 (189)
Q Consensus 172 ~ee~~~~l~~~ 182 (189)
++++.+.|.+.
T Consensus 329 ~~~la~~i~~l 339 (375)
T 3beo_A 329 EETIFSLADEL 339 (375)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 88877777553
No 46
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=76.05 E-value=2.2 Score=35.32 Aligned_cols=67 Identities=18% Similarity=0.182 Sum_probs=38.9
Q ss_pred HhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEe-----CCHH
Q 045940 99 RRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISA-----KNAR 173 (189)
Q Consensus 99 ~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~-----~~~e 173 (189)
..||+|| ..||.||+.|. + .+++|++++.. +.+.. ...+.+.+.|. -+.+. .|++
T Consensus 285 ~~ad~~v-~~~G~~t~~Ea---~------~~G~P~v~~p~--~~~q~-~~a~~~~~~g~-------g~~~~~~~~~~~~~ 344 (391)
T 3tsa_A 285 RTCELVI-CAGGSGTAFTA---T------RLGIPQLVLPQ--YFDQF-DYARNLAAAGA-------GICLPDEQAQSDHE 344 (391)
T ss_dssp GGCSEEE-ECCCHHHHHHH---H------HTTCCEEECCC--STTHH-HHHHHHHHTTS-------EEECCSHHHHTCHH
T ss_pred hhCCEEE-eCCCHHHHHHH---H------HhCCCEEecCC--cccHH-HHHHHHHHcCC-------EEecCcccccCCHH
Confidence 8899988 57888998655 4 37899999843 22221 22233344332 11111 3577
Q ss_pred HHHHHhhcCCCC
Q 045940 174 DLLQGMEVPNLL 185 (189)
Q Consensus 174 e~~~~l~~~~~~ 185 (189)
++.+.+.+....
T Consensus 345 ~l~~ai~~ll~~ 356 (391)
T 3tsa_A 345 QFTDSIATVLGD 356 (391)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHcC
Confidence 777777655443
No 47
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=75.38 E-value=13 Score=32.12 Aligned_cols=112 Identities=12% Similarity=0.051 Sum_probs=61.4
Q ss_pred ChhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEEecCCHHHHHHHHHH--hcCeeEE-ecCCcchHHHHHHHHHH
Q 045940 47 GLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGDVLIVSDMHERKAEMAR--RADAFIA-LPGGYGTMEELLEMITW 123 (189)
Q Consensus 47 GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~~~~~~~~~~R~~~m~~--~sda~I~-lpGG~GTL~El~~~~~~ 123 (189)
|+--+.++....+|++ |.. +.+...... ...+..--+.+.+ ..|++++ ++||+-.-+++.+.+.-
T Consensus 258 Gl~~~t~D~i~~~G~~-----~aN--~lD~gG~a~-----~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~ 325 (397)
T 3ufx_B 258 GLVMYTLDLVNRVGGK-----PAN--FLDIGGGAK-----ADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIR 325 (397)
T ss_dssp HHHHHHHHHHHHTTCC-----BSE--EEECCSCCC-----HHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCC-----cCC--cEecCCCCC-----HHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHH
Confidence 6666778888888886 211 111111110 1123222233332 2466665 78999888999887654
Q ss_pred HhcC-CCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhhcC
Q 045940 124 SQLG-IHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGMEVP 182 (189)
Q Consensus 124 ~~~~-~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~~ 182 (189)
..-. ..+|||++.-...-.+.- .+.+.+. -|..++|||++++.+.+.
T Consensus 326 a~~~~~~~kPvvv~~~G~~~~~~---~~~l~~~---------gip~~~~~e~Aa~~~~~l 373 (397)
T 3ufx_B 326 ALEEGLLTKPVVMRVAGTAEEEA---KKLLEGK---------PVYMYPTSIEAAKVTVAM 373 (397)
T ss_dssp HHTTTCCCSCEEEEEEEECHHHH---HHHTTTS---------SEEECSSHHHHHHHHHHS
T ss_pred HHHhhCCCCcEEEEccCCCHHHH---HHHHHhC---------CCcccCCHHHHHHHHHHH
Confidence 3322 248999854222112222 2222221 289999999999998653
No 48
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=75.29 E-value=30 Score=27.73 Aligned_cols=71 Identities=11% Similarity=-0.019 Sum_probs=38.6
Q ss_pred HHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCC--HH
Q 045940 96 EMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKN--AR 173 (189)
Q Consensus 96 ~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~--~e 173 (189)
.+...||++|.-. |.+|+- |++. .++|++..+..|.-+.-....+.+.+.|. ..+.-.+| ++
T Consensus 250 ~~~~~ad~~v~~s-g~~~~~---EAma------~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~------g~~~~~~d~~~~ 313 (364)
T 1f0k_A 250 AAYAWADVVVCRS-GALTVS---EIAA------AGLPALFVPFQHKDRQQYWNALPLEKAGA------AKIIEQPQLSVD 313 (364)
T ss_dssp HHHHHCSEEEECC-CHHHHH---HHHH------HTCCEEECCCCCTTCHHHHHHHHHHHTTS------EEECCGGGCCHH
T ss_pred HHHHhCCEEEECC-chHHHH---HHHH------hCCCEEEeeCCCCchhHHHHHHHHHhCCc------EEEeccccCCHH
Confidence 4568899887654 455554 4443 58999998876542211111223333321 11111233 78
Q ss_pred HHHHHhhcC
Q 045940 174 DLLQGMEVP 182 (189)
Q Consensus 174 e~~~~l~~~ 182 (189)
++.+.|.+.
T Consensus 314 ~la~~i~~l 322 (364)
T 1f0k_A 314 AVANTLAGW 322 (364)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 888877665
No 49
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=75.00 E-value=4.1 Score=33.69 Aligned_cols=27 Identities=26% Similarity=0.290 Sum_probs=21.3
Q ss_pred EEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 40 VYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 40 v~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
|.-||. |.+-.+++.....+-.++||-
T Consensus 80 i~~GGD-GT~l~a~~~~~~~~~pvlgi~ 106 (307)
T 1u0t_A 80 LVLGGD-GTFLRAAELARNASIPVLGVN 106 (307)
T ss_dssp EEEECH-HHHHHHHHHHHHHTCCEEEEE
T ss_pred EEEeCC-HHHHHHHHHhccCCCCEEEEe
Confidence 344567 999999998887778889984
No 50
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=74.36 E-value=8.4 Score=31.97 Aligned_cols=40 Identities=23% Similarity=0.470 Sum_probs=26.4
Q ss_pred HHHHHHCCC-eEEEcCCCCChhHHHHHHHHhc---CCeEEEEecC
Q 045940 29 ATQLVERKI-NLVYGGGSVGLMGLVSQTIFDG---GCHVLGVIPK 69 (189)
Q Consensus 29 g~~la~~g~-~lv~GGg~~GlM~a~a~ga~~~---gg~viGv~p~ 69 (189)
.+.+...++ .||.-||. |.+..++++..+. -...+|++|.
T Consensus 75 ~~~~~~~~~d~vvv~GGD-GTl~~v~~~l~~~~~~~~~plgiiP~ 118 (332)
T 2bon_A 75 VEEARKFGVATVIAGGGD-GTINEVSTALIQCEGDDIPALGILPL 118 (332)
T ss_dssp HHHHHHHTCSEEEEEESH-HHHHHHHHHHHHCCSSCCCEEEEEEC
T ss_pred HHHHHhcCCCEEEEEccc-hHHHHHHHHHhhcccCCCCeEEEecC
Confidence 333433344 35556667 9999999998843 3446899884
No 51
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=73.94 E-value=39 Score=28.44 Aligned_cols=75 Identities=12% Similarity=0.094 Sum_probs=44.4
Q ss_pred eEEecCCH-HHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcc
Q 045940 83 DVLIVSDM-HERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSS 161 (189)
Q Consensus 83 ~~~~~~~~-~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~ 161 (189)
.+.+.+.+ ...-..++..||.+|.=.||+ . .|+.. .++|++.++...-|... ++.|.
T Consensus 264 ~v~l~~~lg~~~~~~l~~~adlvvt~SGgv--~---~EA~a------lG~Pvv~~~~~ter~e~-------v~~G~---- 321 (385)
T 4hwg_A 264 KIRFLPAFSFTDYVKLQMNAFCILSDSGTI--T---EEASI------LNLPALNIREAHERPEG-------MDAGT---- 321 (385)
T ss_dssp GEEECCCCCHHHHHHHHHHCSEEEECCTTH--H---HHHHH------TTCCEEECSSSCSCTHH-------HHHTC----
T ss_pred CEEEEcCCCHHHHHHHHHhCcEEEECCccH--H---HHHHH------cCCCEEEcCCCccchhh-------hhcCc----
Confidence 34454444 234566789999998666652 2 34443 68999998654224332 22332
Q ss_pred ccCcEEEe-CCHHHHHHHhhcCC
Q 045940 162 ARNIVISA-KNARDLLQGMEVPN 183 (189)
Q Consensus 162 ~~~~i~~~-~~~ee~~~~l~~~~ 183 (189)
...+ .|++++.+.+.+..
T Consensus 322 ----~~lv~~d~~~i~~ai~~ll 340 (385)
T 4hwg_A 322 ----LIMSGFKAERVLQAVKTIT 340 (385)
T ss_dssp ----CEECCSSHHHHHHHHHHHH
T ss_pred ----eEEcCCCHHHHHHHHHHHH
Confidence 2334 48888888876543
No 52
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=72.38 E-value=14 Score=32.87 Aligned_cols=102 Identities=20% Similarity=0.163 Sum_probs=50.5
Q ss_pred CCCeEEEcCCCCChhHH---HHHHHHhcC-CeEEEEecCccccc-cccCCCCceEEecC-------CHHHHHHHHHHhcC
Q 045940 35 RKINLVYGGGSVGLMGL---VSQTIFDGG-CHVLGVIPKALVPI-EISGQTVGDVLIVS-------DMHERKAEMARRAD 102 (189)
Q Consensus 35 ~g~~lv~GGg~~GlM~a---~a~ga~~~g-g~viGv~p~~~~~~-e~~~~~~~~~~~~~-------~~~~R~~~m~~~sd 102 (189)
+|+.+|-||.. |..+| ++++|+..| |.|.-+.|....+. ....++..-..... .-.+.-.-+.+.+|
T Consensus 244 ~G~vlvigGs~-~~~GA~~Laa~aAlr~GaGlv~~~~~~~~~~~~~~~~PE~m~~~~~~~~~~~~~~~~~~~~~~~~~~d 322 (502)
T 3rss_A 244 YGKVLIIAGSR-LYSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNLQECLELSKDVD 322 (502)
T ss_dssp GCEEEEECCCS-SCCSHHHHHHHHHHHTTCSEEEEEEETTTHHHHHHHCTTSEEEEECCSSSSCCGGGHHHHHHHHTTCS
T ss_pred CceEEEEECCC-CCCCHHHHHHHHHHHhCcCeEEEEEcHHHHHHHhhcCCeEEEecccccccccchhhHHHHHHHhccCC
Confidence 59999999975 55555 456666666 67776666543211 00011111010111 01122233557789
Q ss_pred eeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCC
Q 045940 103 AFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDG 140 (189)
Q Consensus 103 a~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g 140 (189)
++++=|| .|+-++..+.+.. .+...++|++ +|.++
T Consensus 323 avviGpG-lg~~~~~~~~~~~-~l~~~~~pvV-lDadg 357 (502)
T 3rss_A 323 VVAIGPG-LGNNEHVREFVNE-FLKTLEKPAV-IDADA 357 (502)
T ss_dssp EEEECTT-CCCSHHHHHHHHH-HHHHCCSCEE-ECHHH
T ss_pred EEEEeCC-CCCCHHHHHHHHH-HHHhcCCCEE-EeCcc
Confidence 8887765 5553333332211 1113478874 55543
No 53
>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}
Probab=72.12 E-value=3.6 Score=31.26 Aligned_cols=13 Identities=31% Similarity=0.496 Sum_probs=5.9
Q ss_pred CCCCeEEEEEcCC
Q 045940 1 MGKFKRVCVFCGS 13 (189)
Q Consensus 1 ~~~~~~I~V~g~s 13 (189)
|++|++|.|.|++
T Consensus 1 M~~m~~ilItGat 13 (227)
T 3dhn_A 1 MEKVKKIVLIGAS 13 (227)
T ss_dssp --CCCEEEEETCC
T ss_pred CCCCCEEEEEcCC
Confidence 4455555555554
No 54
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=71.65 E-value=4.4 Score=33.17 Aligned_cols=34 Identities=24% Similarity=0.218 Sum_probs=24.1
Q ss_pred HHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 93 RKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 93 R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
....+...||++| +|. |++ +.|+++ .++|++..+
T Consensus 267 ~~~~~~~~ad~~v-~~S--~g~--~lEA~a------~G~PvI~~~ 300 (376)
T 1v4v_A 267 SMAALMRASLLLV-TDS--GGL--QEEGAA------LGVPVVVLR 300 (376)
T ss_dssp HHHHHHHTEEEEE-ESC--HHH--HHHHHH------TTCCEEECS
T ss_pred HHHHHHHhCcEEE-ECC--cCH--HHHHHH------cCCCEEecc
Confidence 3455678999985 454 555 667775 799999874
No 55
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=71.46 E-value=9.1 Score=30.93 Aligned_cols=57 Identities=11% Similarity=0.123 Sum_probs=43.5
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe--------EEEcCCCCChhHHHHHHHHhc--CCeEEEE
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKIN--------LVYGGGSVGLMGLVSQTIFDG--GCHVLGV 66 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~--------lv~GGg~~GlM~a~a~ga~~~--gg~viGv 66 (189)
|+|+++... ++...+.+.++-+.|.++|+. +|.=||. |.|-.+++..... +-.++||
T Consensus 1 mki~ii~n~----~~~~~~~~~~l~~~l~~~g~~v~~~~~D~vv~lGGD-GT~l~aa~~~~~~~~~~PilGI 67 (272)
T 2i2c_A 1 MKYMITSKG----DEKSDLLRLNMIAGFGEYDMEYDDVEPEIVISIGGD-GTFLSAFHQYEERLDEIAFIGI 67 (272)
T ss_dssp CEEEEEECC----SHHHHHHHHHHHHHHTTSSCEECSSSCSEEEEEESH-HHHHHHHHHTGGGTTTCEEEEE
T ss_pred CEEEEEECC----CHHHHHHHHHHHHHHHHCCCEeCCCCCCEEEEEcCc-HHHHHHHHHHhhcCCCCCEEEE
Confidence 468888762 355678888899999888753 4555667 9999999988765 7788999
No 56
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=71.20 E-value=5.8 Score=31.84 Aligned_cols=70 Identities=20% Similarity=0.282 Sum_probs=38.7
Q ss_pred CeEEEcCCC--------------CChhHH-HHHHHHhcCCeEEEEe-cCccccccccCCCCceEEecCCH---HHHHHHH
Q 045940 37 INLVYGGGS--------------VGLMGL-VSQTIFDGGCHVLGVI-PKALVPIEISGQTVGDVLIVSDM---HERKAEM 97 (189)
Q Consensus 37 ~~lv~GGg~--------------~GlM~a-~a~ga~~~gg~viGv~-p~~~~~~e~~~~~~~~~~~~~~~---~~R~~~m 97 (189)
..|||||++ +|-|+. .++.+.+.|..|+-+. |....+ ..+...+.+.+.+. .+.-...
T Consensus 5 ~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~---~~~~~~~~~~v~s~~em~~~v~~~ 81 (232)
T 2gk4_A 5 KILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP---EPHPNLSIREITNTKDLLIEMQER 81 (232)
T ss_dssp EEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC---CCCTTEEEEECCSHHHHHHHHHHH
T ss_pred EEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---cCCCCeEEEEHhHHHHHHHHHHHh
Confidence 468999972 386765 5777778899988873 322211 11122344444443 3322223
Q ss_pred HHhcCeeEEecC
Q 045940 98 ARRADAFIALPG 109 (189)
Q Consensus 98 ~~~sda~I~lpG 109 (189)
....|++|-.-+
T Consensus 82 ~~~~Dili~aAA 93 (232)
T 2gk4_A 82 VQDYQVLIHSMA 93 (232)
T ss_dssp GGGCSEEEECSB
T ss_pred cCCCCEEEEcCc
Confidence 345787776555
No 57
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=69.83 E-value=19 Score=29.46 Aligned_cols=140 Identities=11% Similarity=0.044 Sum_probs=67.7
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCcccccccc-CCCCceEEecC--CHHHHHHHHHHhcCeeEEecCCcc
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEIS-GQTVGDVLIVS--DMHERKAEMARRADAFIALPGGYG 112 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~-~~~~~~~~~~~--~~~~R~~~m~~~sda~I~lpGG~G 112 (189)
...+|+|+|+.|++ +.+-|+..|.+|+++..... ..+.. .-..+..+... ++.++-.......|.+|...|+--
T Consensus 168 ~~VlV~GaG~vG~~--a~qla~~~Ga~Vi~~~~~~~-~~~~~~~lGa~~~i~~~~~~~~~~~~~~~g~~d~vid~~g~~~ 244 (340)
T 3s2e_A 168 QWVVISGIGGLGHV--AVQYARAMGLRVAAVDIDDA-KLNLARRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPK 244 (340)
T ss_dssp SEEEEECCSTTHHH--HHHHHHHTTCEEEEEESCHH-HHHHHHHTTCSEEEETTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CEEEEECCCHHHHH--HHHHHHHCCCeEEEEeCCHH-HHHHHHHcCCCEEEeCCCcCHHHHHHHhCCCCCEEEEeCCCHH
Confidence 45688888766665 45667777889999854321 11111 11122333322 343322221224577776667666
Q ss_pred hHHHHHHHHH----HHhcCCCCCcE------------EEEeCCCC-chHHHHHHHHHHHcCCCCccccCcEEEeCCHHHH
Q 045940 113 TMEELLEMIT----WSQLGIHDKPV------------GVLNVDGY-YDSLLRFFDKGVEEGFIKSSARNIVISAKNARDL 175 (189)
Q Consensus 113 TL~El~~~~~----~~~~~~~~kPi------------ill~~~g~-~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~ 175 (189)
++++.+..+. +...|....++ -+.+...+ ++.+.+ +-+++++|-+++.. +. +-.++..|+
T Consensus 245 ~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~-~~~l~~~g~l~~~~-~~-~~l~~~~~A 321 (340)
T 3s2e_A 245 AFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQE-SLDFAAHGDVKATV-ST-AKLDDVNDV 321 (340)
T ss_dssp HHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHH-HHHHHHTTSCCCCE-EE-ECGGGHHHH
T ss_pred HHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHH-HHHHHHhCCCCceE-EE-EeHHHHHHH
Confidence 7766655442 00112111111 11221111 223333 33566777777532 22 255677777
Q ss_pred HHHhhc
Q 045940 176 LQGMEV 181 (189)
Q Consensus 176 ~~~l~~ 181 (189)
++.+++
T Consensus 322 ~~~~~~ 327 (340)
T 3s2e_A 322 FGRLRE 327 (340)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 777754
No 58
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=68.06 E-value=7.4 Score=28.47 Aligned_cols=71 Identities=13% Similarity=0.276 Sum_probs=44.2
Q ss_pred HHHHHHhcCeeEEec--CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCC
Q 045940 94 KAEMARRADAFIALP--GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKN 171 (189)
Q Consensus 94 ~~~m~~~sda~I~lp--GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~ 171 (189)
...+...||++|..+ .|+|+- ++|++. .++|+|..+.. ...+++ .......+. .+|
T Consensus 91 ~~~~~~~adi~v~ps~~e~~~~~--~~Eama------~G~PvI~~~~~----~~~e~i---------~~~~~g~~~-~~d 148 (177)
T 2f9f_A 91 LIDLYSRCKGLLCTAKDEDFGLT--PIEAMA------SGKPVIAVNEG----GFKETV---------INEKTGYLV-NAD 148 (177)
T ss_dssp HHHHHHHCSEEEECCSSCCSCHH--HHHHHH------TTCCEEEESSH----HHHHHC---------CBTTTEEEE-CSC
T ss_pred HHHHHHhCCEEEeCCCcCCCChH--HHHHHH------cCCcEEEeCCC----CHHHHh---------cCCCccEEe-CCC
Confidence 456678999988744 455633 467774 79999987643 222221 112223344 789
Q ss_pred HHHHHHHhhcCCCCC
Q 045940 172 ARDLLQGMEVPNLLP 186 (189)
Q Consensus 172 ~ee~~~~l~~~~~~~ 186 (189)
++++.+.|.+....|
T Consensus 149 ~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 149 VNEIIDAMKKVSKNP 163 (177)
T ss_dssp HHHHHHHHHHHHHCT
T ss_pred HHHHHHHHHHHHhCH
Confidence 999999987765433
No 59
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=67.77 E-value=33 Score=28.22 Aligned_cols=142 Identities=13% Similarity=0.110 Sum_probs=67.8
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEEecC--C-HHHHHHHHH---HhcCeeEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIPKALVPIEISG-QTVGDVLIVS--D-MHERKAEMA---RRADAFIAL 107 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p~~~~~~e~~~-~~~~~~~~~~--~-~~~R~~~m~---~~sda~I~l 107 (189)
...+|+|+|+.|++ +.+-|+..|. +|+++-.... ..+... -..+..+... + -...+.+.. ...|.+|-.
T Consensus 173 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~ 249 (356)
T 1pl8_A 173 HKVLVCGAGPIGMV--TLLVAKAMGAAQVVVTDLSAT-RLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIEC 249 (356)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEEESCHH-HHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEEC
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEECCCHH-HHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEEC
Confidence 45688998766665 4555667787 8888854321 111110 1122333332 1 111112211 236888888
Q ss_pred cCCcchHHHHHHHHHH----HhcCCCCC------------cEEEEeCCCCchHHHHHHHHHHHcCCCCccc-cCcEEEeC
Q 045940 108 PGGYGTMEELLEMITW----SQLGIHDK------------PVGVLNVDGYYDSLLRFFDKGVEEGFIKSSA-RNIVISAK 170 (189)
Q Consensus 108 pGG~GTL~El~~~~~~----~~~~~~~k------------Piill~~~g~~~~l~~~l~~~~~~g~i~~~~-~~~i~~~~ 170 (189)
.|+.-++++.+..+.- ..+|.... -+-+.+...+.+.+.+.+ .++++|-++.+. ....+-.+
T Consensus 250 ~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~-~l~~~g~i~~~~~i~~~~~l~ 328 (356)
T 1pl8_A 250 TGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAI-SMLASKSVNVKPLVTHRFPLE 328 (356)
T ss_dssp SCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHH-HHHHTTSCCCGGGEEEEEEGG
T ss_pred CCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHH-HHHHcCCCChHHheEEEecHH
Confidence 8876677766554421 00111111 111222211222233322 345666665332 23455677
Q ss_pred CHHHHHHHhhc
Q 045940 171 NARDLLQGMEV 181 (189)
Q Consensus 171 ~~ee~~~~l~~ 181 (189)
+..|+++.+++
T Consensus 329 ~~~~A~~~~~~ 339 (356)
T 1pl8_A 329 KALEAFETFKK 339 (356)
T ss_dssp GHHHHHHHHHT
T ss_pred HHHHHHHHHhC
Confidence 88888887764
No 60
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=67.52 E-value=42 Score=26.17 Aligned_cols=39 Identities=5% Similarity=0.043 Sum_probs=24.9
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
||+-++|+++..... ++-+.+....+-+.+.++|+.++.
T Consensus 1 ~s~~~~I~~i~~~~~--~~~~~~~~~gi~~~a~~~g~~~~~ 39 (305)
T 3g1w_A 1 MSLNETYMMITFQSG--MDYWKRCLKGFEDAAQALNVTVEY 39 (305)
T ss_dssp ----CEEEEEESSTT--STHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCCCceEEEEEccCC--ChHHHHHHHHHHHHHHHcCCEEEE
Confidence 678888988876642 565666666777777777887765
No 61
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=67.26 E-value=3.9 Score=29.36 Aligned_cols=33 Identities=21% Similarity=0.354 Sum_probs=21.6
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINL 39 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~l 39 (189)
|++|.|+.+|..++. .+.|+++++.+.+.|+.+
T Consensus 1 M~ki~I~y~S~tGnT---~~~A~~ia~~l~~~g~~v 33 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNT---ESIAQKLEELIAAGGHEV 33 (148)
T ss_dssp -CEEEEEEECSSSHH---HHHHHHHHHHHHTTTCEE
T ss_pred CCeEEEEEECCCchH---HHHHHHHHHHHHhCCCeE
Confidence 467777777776633 467777777777766543
No 62
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=66.62 E-value=10 Score=31.79 Aligned_cols=48 Identities=25% Similarity=0.367 Sum_probs=35.2
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHH
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFD 150 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~ 150 (189)
..|+|||+-| .-||+|-..++.++- ..+|||||.+.- --.|...++++
T Consensus 79 ~~dG~VItHG-TDTmeeTA~~Ls~~l--~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 131 (326)
T 1nns_A 79 KTDGFVITHG-TDTMEETAYFLDLTV--KCDKPVVMVGAMRPSTSMSADGPFNLYN 131 (326)
T ss_dssp GCSEEEEECC-SSSHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred cCCcEEEEcC-chhHHHHHHHHHHhc--CCCCCEEEeCCCCCCcCCCCchHHHHHH
Confidence 4589999976 899999999988764 468999998752 13345555554
No 63
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=66.51 E-value=6.8 Score=29.41 Aligned_cols=34 Identities=15% Similarity=0.123 Sum_probs=20.7
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKIN 38 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~ 38 (189)
|++|++|.|+.+| .++ -.+.|+.+.+.+.+.|+.
T Consensus 1 M~~mmkilii~~S-~g~---T~~la~~i~~~l~~~g~~ 34 (199)
T 2zki_A 1 MSCKPNILVLFYG-YGS---IVELAKEIGKGAEEAGAE 34 (199)
T ss_dssp --CCCEEEEEECC-SSH---HHHHHHHHHHHHHHHSCE
T ss_pred CCCCcEEEEEEeC-ccH---HHHHHHHHHHHHHhCCCE
Confidence 6677777777666 442 346667777777666654
No 64
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=65.82 E-value=30 Score=28.13 Aligned_cols=142 Identities=15% Similarity=0.181 Sum_probs=70.9
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCcccccccc-CCCCceEEec--CCHHHHHHHHHH--hcCeeEEecCC
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEIS-GQTVGDVLIV--SDMHERKAEMAR--RADAFIALPGG 110 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~-~~~~~~~~~~--~~~~~R~~~m~~--~sda~I~lpGG 110 (189)
...+|+||.. |+=.++++-|+..|.+|+++..+.. ..+.. .-..+..+.. .++.++-..+.. ..|+++-..|+
T Consensus 150 ~~vlV~Ga~g-~iG~~~~~~a~~~Ga~Vi~~~~~~~-~~~~~~~~ga~~~~~~~~~~~~~~~~~~~~~~g~D~vid~~g~ 227 (334)
T 3qwb_A 150 DYVLLFAAAG-GVGLILNQLLKMKGAHTIAVASTDE-KLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDASFDSVGK 227 (334)
T ss_dssp CEEEESSTTB-HHHHHHHHHHHHTTCEEEEEESSHH-HHHHHHHTTCSEEEETTTSCHHHHHHHHTTTSCEEEEEECCGG
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHcCCcEEEeCCCchHHHHHHHHhCCCCceEEEECCCh
Confidence 3468888654 5556677778888999998865321 11111 0112223332 233332222211 25777766665
Q ss_pred cchHHHHHHHHHH----HhcCCC-------------CCcEEEEeCC--CCc---hHHH---HHHHHHHHcCCCCccccCc
Q 045940 111 YGTMEELLEMITW----SQLGIH-------------DKPVGVLNVD--GYY---DSLL---RFFDKGVEEGFIKSSARNI 165 (189)
Q Consensus 111 ~GTL~El~~~~~~----~~~~~~-------------~kPiill~~~--g~~---~~l~---~~l~~~~~~g~i~~~~~~~ 165 (189)
.+++..+..+.- ..+|.. .|-+-+.... +|. +.+. +.+-.++++|-+++. ...
T Consensus 228 -~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-i~~ 305 (334)
T 3qwb_A 228 -DTFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIK-IYK 305 (334)
T ss_dssp -GGHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCC-EEE
T ss_pred -HHHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCc-eee
Confidence 566655543320 011111 1222232211 111 1222 234456778888765 344
Q ss_pred EEEeCCHHHHHHHhhc
Q 045940 166 VISAKNARDLLQGMEV 181 (189)
Q Consensus 166 i~~~~~~ee~~~~l~~ 181 (189)
.+-.++.+|+++.+++
T Consensus 306 ~~~l~~~~~A~~~~~~ 321 (334)
T 3qwb_A 306 TYPLRDYRTAAADIES 321 (334)
T ss_dssp EEEGGGHHHHHHHHHT
T ss_pred EEcHHHHHHHHHHHHh
Confidence 5567889999988865
No 65
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=65.69 E-value=28 Score=28.57 Aligned_cols=68 Identities=16% Similarity=0.211 Sum_probs=39.0
Q ss_pred EEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEEecCCH--HHHHHHHHHhcCeeEEecCCc
Q 045940 39 LVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGDVLIVSDM--HERKAEMARRADAFIALPGGY 111 (189)
Q Consensus 39 lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~~~~~~~~--~~R~~~m~~~sda~I~lpGG~ 111 (189)
++.|||..|.| ++..|++.|=+|+.+-++.. .......++.+..+.. .+....+.+..|+++...|..
T Consensus 5 ~ilGgg~~g~~--~~~~Ak~~G~~vv~vd~~~~---~~~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~ 74 (363)
T 4ffl_A 5 CLVGGKLQGFE--AAYLSKKAGMKVVLVDKNPQ---ALIRNYADEFYCFDVIKEPEKLLELSKRVDAVLPVNENL 74 (363)
T ss_dssp EEECCSHHHHH--HHHHHHHTTCEEEEEESCTT---CTTTTTSSEEEECCTTTCHHHHHHHHTSSSEEEECCCCH
T ss_pred EEECCCHHHHH--HHHHHHHCCCEEEEEeCCCC---ChhHhhCCEEEECCCCcCHHHHHHHhcCCCEEEECCCCh
Confidence 55666655665 55678899999998854322 1122223344444433 344444556788887766643
No 66
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=65.18 E-value=47 Score=25.90 Aligned_cols=31 Identities=26% Similarity=0.251 Sum_probs=21.7
Q ss_pred CCCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 35 RKINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 35 ~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
....|||||.. |+=.++++...+.|-+|+.+
T Consensus 26 ~k~vlITGas~-gIG~a~a~~l~~~G~~V~~~ 56 (272)
T 4e3z_A 26 TPVVLVTGGSR-GIGAAVCRLAARQGWRVGVN 56 (272)
T ss_dssp SCEEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 34567777776 77777777777777766544
No 67
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=64.74 E-value=25 Score=28.54 Aligned_cols=43 Identities=28% Similarity=0.276 Sum_probs=28.9
Q ss_pred HhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCc
Q 045940 99 RRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYY 142 (189)
Q Consensus 99 ~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~ 142 (189)
+...+.|+|+||. |...+++.+.-..-...-+-|.+++.+.||
T Consensus 53 ~~~~~~l~LsgGs-tP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 95 (268)
T 3ico_A 53 ARGQALIVLTGGG-NGIALLRYLSAQAQQIEWSKVHLFWGDERY 95 (268)
T ss_dssp HHSCEEEEECCSH-HHHHHHHHHHHHGGGSCGGGEEEEESEEEC
T ss_pred hcCceEEEEecCC-chhHHHHHHHHHhhhhhheeeEEeeccccc
Confidence 3678999999995 666777776543222334667777776677
No 68
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=63.84 E-value=10 Score=27.11 Aligned_cols=34 Identities=24% Similarity=0.282 Sum_probs=25.3
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv 40 (189)
|++|.|+.+|..++.. +.|+++++.|.+.|+.+.
T Consensus 1 M~ki~I~Y~S~tGnT~---~~A~~ia~~l~~~g~~v~ 34 (147)
T 2hna_A 1 MADITLISGSTLGGAE---YVAEHLAEKLEEAGFTTE 34 (147)
T ss_dssp CCSEEEECCTTSCCCH---HHHHHHHHHHHHTTCCEE
T ss_pred CCeEEEEEECCchHHH---HHHHHHHHHHHHCCCceE
Confidence 4567888888888777 566688888888777654
No 69
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=63.10 E-value=17 Score=30.64 Aligned_cols=140 Identities=14% Similarity=0.220 Sum_probs=69.9
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEEec--CCHHHHHHHHHH--hcCeeEEecC
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIPKALVPIEISG-QTVGDVLIV--SDMHERKAEMAR--RADAFIALPG 109 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p~~~~~~e~~~-~~~~~~~~~--~~~~~R~~~m~~--~sda~I~lpG 109 (189)
...+|+|+|..|++ +.+-|+..|. +|+++-.... ..+... -..+.++.. .++.++-..+.. -.|+++=.-|
T Consensus 215 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~i~~~t~g~g~D~vid~~g 291 (404)
T 3ip1_A 215 DNVVILGGGPIGLA--AVAILKHAGASKVILSEPSEV-RRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKLFLEATG 291 (404)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEECSCHH-HHHHHHHHTCSEEECTTTSCHHHHHHHHTTTCCCSEEEECSS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEECCCHH-HHHHHHHcCCCEEEcCCCCCHHHHHHHHhCCCCCCEEEECCC
Confidence 35689998766665 5566777787 8888843221 111100 011223322 244433322222 3677777777
Q ss_pred Cc-chHHHHHHHH-HH-Hh------cCCCCCc------------EEEEeCCCC--chHHHHHHHHHHHcCCCCccc-cCc
Q 045940 110 GY-GTMEELLEMI-TW-SQ------LGIHDKP------------VGVLNVDGY--YDSLLRFFDKGVEEGFIKSSA-RNI 165 (189)
Q Consensus 110 G~-GTL~El~~~~-~~-~~------~~~~~kP------------iill~~~g~--~~~l~~~l~~~~~~g~i~~~~-~~~ 165 (189)
+. .+++.+..++ .. .. .|....+ +-+.+..++ .+.+.. +-.++++| ++... ...
T Consensus 292 ~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~-~~~ll~~g-l~~~~~i~~ 369 (404)
T 3ip1_A 292 VPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFPR-VISLMASG-MDMTKIISK 369 (404)
T ss_dssp CHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCCCCSTTHHHH-HHHHHHTT-CCGGGGCCE
T ss_pred CcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecCCCchHHHHH-HHHHHHcC-CChhheEEE
Confidence 76 3666555544 00 11 1111111 112222111 233333 33556778 77543 355
Q ss_pred EEEeCCHHHHHHHhh
Q 045940 166 VISAKNARDLLQGME 180 (189)
Q Consensus 166 i~~~~~~ee~~~~l~ 180 (189)
.+-.++.+|+++.+.
T Consensus 370 ~~~l~~~~~A~~~~~ 384 (404)
T 3ip1_A 370 TVSMEEIPEYIKRLQ 384 (404)
T ss_dssp EECGGGHHHHHHHTT
T ss_pred EeeHHHHHHHHHHHh
Confidence 667788888888775
No 70
>1g63_A Epidermin modifying enzyme EPID; alpha, beta protein, rossmann like fold, oxidoreductase; HET: FMN; 2.50A {Staphylococcus epidermidis} SCOP: c.34.1.1 PDB: 1g5q_A*
Probab=62.43 E-value=2.8 Score=32.40 Aligned_cols=88 Identities=11% Similarity=0.085 Sum_probs=52.5
Q ss_pred HHhcCeeEEecCCcchHHHHHHHHH-----HHhcCCCCCcEEEEeC--CCCchHH--HHHHHHHHHcCC--CCccccCcE
Q 045940 98 ARRADAFIALPGGYGTMEELLEMIT-----WSQLGIHDKPVGVLNV--DGYYDSL--LRFFDKGVEEGF--IKSSARNIV 166 (189)
Q Consensus 98 ~~~sda~I~lpGG~GTL~El~~~~~-----~~~~~~~~kPiill~~--~g~~~~l--~~~l~~~~~~g~--i~~~~~~~i 166 (189)
...+|++|+.|-..+|+.-+..=++ ..-+ ..++|+++.-. ...|..- .+.++.+.+.|+ +++.....+
T Consensus 71 ~~~aD~~vIaPaTantlAKiA~GiaDnllt~~~l-a~~~pvvlaPamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f 149 (181)
T 1g63_A 71 VENHEYILVLPASANTINKIANGICDNLLTTVCL-TGYQKLFIFPNMNIRMWGNPFLQKNIDLLKNNDVKVYSPDMNKSF 149 (181)
T ss_dssp HHTCSEEEEEEECHHHHHHHHTTCCCSHHHHHHH-HTGGGEEEEECCCHHHHTCHHHHHHHHHHHTTTCEECCCEECC--
T ss_pred cccCCEEEEecCCHHHHHHHHccccCcHHHHHHH-HcCCCEEEEeCCChhhcCCHHHHHHHHHHHHCCCEEECCCCCccc
Confidence 5679999999999999988753211 0001 15799998841 2366642 334556666664 444332111
Q ss_pred ----------EEeCCHHHHHHHhhcCCCCC
Q 045940 167 ----------ISAKNARDLLQGMEVPNLLP 186 (189)
Q Consensus 167 ----------~~~~~~ee~~~~l~~~~~~~ 186 (189)
--..++|++++.+.+..+.|
T Consensus 150 ~lacg~~~g~g~~~~~~~iv~~v~~~l~~~ 179 (181)
T 1g63_A 150 EISSGRYKNNITMPNIENVLNFVLNNEKRP 179 (181)
T ss_dssp --------CCEECCCHHHHHHHHHC-----
T ss_pred ccccCCccCCcCCCCHHHHHHHHHHHhccc
Confidence 35679999999998876433
No 71
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=62.21 E-value=16 Score=29.93 Aligned_cols=33 Identities=6% Similarity=0.027 Sum_probs=24.3
Q ss_pred HHHHHHcCCCCccccCcEEEeCCHHHHHHHhhc
Q 045940 149 FDKGVEEGFIKSSARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 149 l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~ 181 (189)
+-.++++|-++.......+-.++.+|+++.+++
T Consensus 287 ~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~ 319 (340)
T 3gms_A 287 LIRLVENEQLRFMKVHSTYELADVKAAVDVVQS 319 (340)
T ss_dssp HHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHC
T ss_pred HHHHHHcCCCccccccEEEeHHHHHHHHHHHHh
Confidence 335678888887544556778899999998865
No 72
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=61.93 E-value=12 Score=30.10 Aligned_cols=67 Identities=22% Similarity=0.255 Sum_probs=40.5
Q ss_pred HHHHHhcCeeEEec--CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEE--eC
Q 045940 95 AEMARRADAFIALP--GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVIS--AK 170 (189)
Q Consensus 95 ~~m~~~sda~I~lp--GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~--~~ 170 (189)
..+...||++|.-. .|+|+- +.|+++ .++|++..+..|.-+ ++++- . .-+.+ ..
T Consensus 265 ~~~~~~ad~~v~ps~~e~~~~~--~~Ea~a------~G~Pvi~~~~~~~~e----~i~~~-~---------~g~~~~~~~ 322 (374)
T 2iw1_A 265 SELMAAADLLLHPAYQEAAGIV--LLEAIT------AGLPVLTTAVCGYAH----YIADA-N---------CGTVIAEPF 322 (374)
T ss_dssp HHHHHHCSEEEECCSCCSSCHH--HHHHHH------HTCCEEEETTSTTTH----HHHHH-T---------CEEEECSSC
T ss_pred HHHHHhcCEEEeccccCCcccH--HHHHHH------CCCCEEEecCCCchh----hhccC-C---------ceEEeCCCC
Confidence 45668899887644 345554 566664 689999988765432 22210 1 12223 23
Q ss_pred CHHHHHHHhhcCC
Q 045940 171 NARDLLQGMEVPN 183 (189)
Q Consensus 171 ~~ee~~~~l~~~~ 183 (189)
|++++.+.|.+..
T Consensus 323 ~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 323 SQEQLNEVLRKAL 335 (374)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8888888886543
No 73
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=61.57 E-value=14 Score=30.38 Aligned_cols=143 Identities=16% Similarity=0.067 Sum_probs=72.8
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEEec--CCHHHHHHHHHH--hcCeeEEecC
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIPKALVPIEISG-QTVGDVLIV--SDMHERKAEMAR--RADAFIALPG 109 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p~~~~~~e~~~-~~~~~~~~~--~~~~~R~~~m~~--~sda~I~lpG 109 (189)
...+|+|+|+.|++ +.+-|+..|. +|+++-.... ..+... -..+..+.. .++.++-..+.. -.|+++-..|
T Consensus 168 ~~VlV~GaG~vG~~--a~qla~~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g 244 (352)
T 3fpc_A 168 DTVCVIGIGPVGLM--SVAGANHLGAGRIFAVGSRKH-CCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGG 244 (352)
T ss_dssp CCEEEECCSHHHHH--HHHHHHTTTCSSEEEECCCHH-HHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCcEEEEECCCHH-HHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 45688987666655 4556777787 7888844221 111110 011233322 344443322222 2677777778
Q ss_pred CcchHHHHHHHHHH----HhcCCC--CCc--------------EEEEeCCCCc-hHHHHHHHHHHHcCCCCccc-cCcEE
Q 045940 110 GYGTMEELLEMITW----SQLGIH--DKP--------------VGVLNVDGYY-DSLLRFFDKGVEEGFIKSSA-RNIVI 167 (189)
Q Consensus 110 G~GTL~El~~~~~~----~~~~~~--~kP--------------iill~~~g~~-~~l~~~l~~~~~~g~i~~~~-~~~i~ 167 (189)
+..++++.+..+.- ..+|.. ..+ +-+.....+. ...++.+-+++++|-++.+. ....+
T Consensus 245 ~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~ 324 (352)
T 3fpc_A 245 DVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVF 324 (352)
T ss_dssp CTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTTSCCGGGGEEEEE
T ss_pred ChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcCCCChhHhheeeC
Confidence 77788877665421 112211 111 1122211000 12223344567788887653 23445
Q ss_pred E-eCCHHHHHHHhhc
Q 045940 168 S-AKNARDLLQGMEV 181 (189)
Q Consensus 168 ~-~~~~ee~~~~l~~ 181 (189)
- .++.+|+++.+++
T Consensus 325 ~gl~~~~~A~~~~~~ 339 (352)
T 3fpc_A 325 RGFDNIEKAFMLMKD 339 (352)
T ss_dssp ESTTHHHHHHHHHHS
T ss_pred CCHHHHHHHHHHHHh
Confidence 5 7889999988865
No 74
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=61.51 E-value=20 Score=29.59 Aligned_cols=139 Identities=18% Similarity=0.119 Sum_probs=67.2
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCcccccccc--CCCCceEEecCCHHHHHHHHHHhcCeeEEecCCcch
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEIS--GQTVGDVLIVSDMHERKAEMARRADAFIALPGGYGT 113 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~--~~~~~~~~~~~~~~~R~~~m~~~sda~I~lpGG~GT 113 (189)
...+|+|+|+.|++ +.+-|+..|.+|+++...... .+.. .-..+.++...+- ++-..+....|.+|-.-|+.-+
T Consensus 182 ~~VlV~GaG~vG~~--a~qlak~~Ga~Vi~~~~~~~~-~~~~~~~lGa~~vi~~~~~-~~~~~~~~g~D~vid~~g~~~~ 257 (357)
T 2cf5_A 182 LRGGILGLGGVGHM--GVKIAKAMGHHVTVISSSNKK-REEALQDLGADDYVIGSDQ-AKMSELADSLDYVIDTVPVHHA 257 (357)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHHTCEEEEEESSTTH-HHHHHTTSCCSCEEETTCH-HHHHHSTTTEEEEEECCCSCCC
T ss_pred CEEEEECCCHHHHH--HHHHHHHCCCeEEEEeCChHH-HHHHHHHcCCceeeccccH-HHHHHhcCCCCEEEECCCChHH
Confidence 34588887666655 445566678899888653211 1111 1112334433332 1111111246777777777667
Q ss_pred HHHHHHHHH----HHhcCCCCCc------------EEEEeCCCC-chHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHH
Q 045940 114 MEELLEMIT----WSQLGIHDKP------------VGVLNVDGY-YDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLL 176 (189)
Q Consensus 114 L~El~~~~~----~~~~~~~~kP------------iill~~~g~-~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~ 176 (189)
+++.+..+. +..+|....| +-+.+...+ .+.+.+.+ .++++|-+++.. ..+-.++.+|++
T Consensus 258 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~-~l~~~g~l~~~~--~~~~l~~~~~A~ 334 (357)
T 2cf5_A 258 LEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKETEEML-EFCKEKGLSSII--EVVKMDYVNTAF 334 (357)
T ss_dssp SHHHHTTEEEEEEEEECSCCSSCCCCCHHHHHHHTCEEEECCSCCHHHHHHHH-HHHHHTTCCCCE--EEEEGGGHHHHH
T ss_pred HHHHHHHhccCCEEEEeCCCCCCccccCHHHHhCccEEEEEccCCHHHHHHHH-HHHHcCCCCCce--EEEeHHHHHHHH
Confidence 766554331 0111211111 112221111 12233322 445667776543 355667888888
Q ss_pred HHhhc
Q 045940 177 QGMEV 181 (189)
Q Consensus 177 ~~l~~ 181 (189)
+.+++
T Consensus 335 ~~~~~ 339 (357)
T 2cf5_A 335 ERLEK 339 (357)
T ss_dssp HHHHT
T ss_pred HHHHC
Confidence 88764
No 75
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=61.12 E-value=64 Score=26.65 Aligned_cols=143 Identities=15% Similarity=0.171 Sum_probs=70.6
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEEec----CCHHHHHHHHH-HhcCeeEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIPKALVPIEISG-QTVGDVLIV----SDMHERKAEMA-RRADAFIALP 108 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p~~~~~~e~~~-~~~~~~~~~----~~~~~R~~~m~-~~sda~I~lp 108 (189)
...+|+|+|+.|++ +.+-|+..|. +|+++-+... ..+... -..+..+.. .++.++-..+. .-.|++|-..
T Consensus 195 ~~VlV~GaG~vG~~--a~q~a~~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~ 271 (378)
T 3uko_A 195 SNVAIFGLGTVGLA--VAEGAKTAGASRIIGIDIDSK-KYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECI 271 (378)
T ss_dssp CCEEEECCSHHHHH--HHHHHHHHTCSCEEEECSCTT-HHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCeEEEEcCCHH-HHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECC
Confidence 46789998776765 4455666787 7888843221 111111 112233332 23433222211 1368888888
Q ss_pred CCcchHHHHHHHHHHH-----hcCCCC--CcEE-----------EEeC-CCCchH--HHHHHHHHHHcCCCCccc-cCcE
Q 045940 109 GGYGTMEELLEMITWS-----QLGIHD--KPVG-----------VLNV-DGYYDS--LLRFFDKGVEEGFIKSSA-RNIV 166 (189)
Q Consensus 109 GG~GTL~El~~~~~~~-----~~~~~~--kPii-----------ll~~-~g~~~~--l~~~l~~~~~~g~i~~~~-~~~i 166 (189)
|+.-++++.+..+.-. .+|... .++- +.+. .+.|.. .+..+-.++.+|-++.+. ....
T Consensus 272 g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~ 351 (378)
T 3uko_A 272 GNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFGGFKSRTQVPWLVEKYMNKEIKVDEYITHN 351 (378)
T ss_dssp CCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEE
T ss_pred CCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEEecCCCchHHHHHHHHHHHcCCCChhHheeeE
Confidence 8777777666554211 111111 1111 1111 011111 122233456777777543 3455
Q ss_pred EEeCCHHHHHHHhhc
Q 045940 167 ISAKNARDLLQGMEV 181 (189)
Q Consensus 167 ~~~~~~ee~~~~l~~ 181 (189)
+-.++..|+++.+++
T Consensus 352 ~~l~~~~~A~~~~~~ 366 (378)
T 3uko_A 352 LTLGEINKAFDLLHE 366 (378)
T ss_dssp EEGGGHHHHHHHTTC
T ss_pred eeHHHHHHHHHHHHC
Confidence 667888888888764
No 76
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=60.93 E-value=30 Score=29.84 Aligned_cols=42 Identities=14% Similarity=0.094 Sum_probs=27.2
Q ss_pred EecCCHHHHHHHHHHhcCe-eEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 85 LIVSDMHERKAEMARRADA-FIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 85 ~~~~~~~~R~~~m~~~sda-~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
.+++..+.. . +...+++ .++--||+||..|.. .+++|++++-
T Consensus 356 ~v~~~~pq~-~-~L~h~~~~~~vth~G~~s~~Eal---------~~GvP~i~~P 398 (482)
T 2pq6_A 356 LIASWCPQD-K-VLNHPSIGGFLTHCGWNSTTESI---------CAGVPMLCWP 398 (482)
T ss_dssp EEESCCCHH-H-HHTSTTEEEEEECCCHHHHHHHH---------HHTCCEEECC
T ss_pred EEEeecCHH-H-HhcCCCCCEEEecCCcchHHHHH---------HcCCCEEecC
Confidence 344444443 2 4455554 667789999997774 2689999884
No 77
>3r8s_O 50S ribosomal protein L18; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_O 3j19_O 2wwq_O 3oat_O* 3oas_O* 3ofd_O 3ofc_O 3ofr_O* 3ofz_O* 3og0_O 3ofq_O 3r8t_O 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O ...
Probab=60.63 E-value=15 Score=26.25 Aligned_cols=40 Identities=23% Similarity=0.339 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHC----CCe-EEE--cCC-CCChhHHHHHHHHhcCC
Q 045940 22 SDAALDLATQLVER----KIN-LVY--GGG-SVGLMGLVSQTIFDGGC 61 (189)
Q Consensus 22 ~~~A~~lg~~la~~----g~~-lv~--GGg-~~GlM~a~a~ga~~~gg 61 (189)
.+.|+.+|+.||++ |+. +|+ ||. .-|-..|++++|.++|=
T Consensus 67 ~~AA~~vG~llA~Ral~~GI~~vvfDrgg~~yhGrV~Ala~~are~Gl 114 (116)
T 3r8s_O 67 KDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGL 114 (116)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCEEECTTSCSSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEecCCCcccHHHHHHHHHHHHhCC
Confidence 57899999999883 655 333 552 35999999999999873
No 78
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=60.42 E-value=37 Score=27.10 Aligned_cols=44 Identities=34% Similarity=0.330 Sum_probs=29.3
Q ss_pred HHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCc
Q 045940 98 ARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYY 142 (189)
Q Consensus 98 ~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~ 142 (189)
.+...+.|+|+||. |...+++.+.-..-...-..|.+++.+.||
T Consensus 36 ~~~~~~~l~LsgGs-tP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (251)
T 3tx2_A 36 AERGKAMIVLTGGG-TGIALLKHLRDVASGLDWTNVHVFWGDDRY 79 (251)
T ss_dssp HHHSCEEEEECCSH-HHHHHHHHHHHHHTTSCGGGEEEEESEEES
T ss_pred HhCCCEEEEECCCc-hHHHHHHHHHhhccCCCCceeEEEeeeecc
Confidence 34678999999994 666666666543322334667777776676
No 79
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=59.41 E-value=53 Score=27.08 Aligned_cols=118 Identities=12% Similarity=0.094 Sum_probs=58.4
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCCceE
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGDV 84 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~~ 84 (189)
++|.+.||..- -+.--|-.|++.|.++|+.|.+=|...|+ ++ +-.-++|-....+ |..-.+. ......
T Consensus 3 ~~i~i~~GGTg----GHi~palala~~L~~~g~~V~~vg~~~g~-e~--~~v~~~g~~~~~i-~~~~~~~----~~~~~~ 70 (365)
T 3s2u_A 3 GNVLIMAGGTG----GHVFPALACAREFQARGYAVHWLGTPRGI-EN--DLVPKAGLPLHLI-QVSGLRG----KGLKSL 70 (365)
T ss_dssp CEEEEECCSSH----HHHHHHHHHHHHHHHTTCEEEEEECSSST-HH--HHTGGGTCCEEEC-C----------------
T ss_pred CcEEEEcCCCH----HHHHHHHHHHHHHHhCCCEEEEEECCchH-hh--chhhhcCCcEEEE-ECCCcCC----CCHHHH
Confidence 46777666432 46667888999999999998764444254 32 2222344443332 2111111 111111
Q ss_pred Ee-----cCC-HHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCC
Q 045940 85 LI-----VSD-MHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGY 141 (189)
Q Consensus 85 ~~-----~~~-~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~ 141 (189)
+. ... ...|+.+--..-|++|...|-..-.- ...++ ..++|+++...+-+
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~-~laA~------~~~iP~vihe~n~~ 126 (365)
T 3s2u_A 71 VKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPG-GLAAR------LNGVPLVIHEQNAV 126 (365)
T ss_dssp --CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHH-HHHHH------HTTCCEEEEECSSS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHH-HHHHH------HcCCCEEEEecchh
Confidence 11 111 23455444455788777766443322 22222 36799999876633
No 80
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=58.35 E-value=73 Score=25.85 Aligned_cols=140 Identities=16% Similarity=0.138 Sum_probs=69.5
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCcccccccc-CCCCceEEec--CCHHHHHHHHHHhcCeeEEecCCcc
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEIS-GQTVGDVLIV--SDMHERKAEMARRADAFIALPGGYG 112 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~-~~~~~~~~~~--~~~~~R~~~m~~~sda~I~lpGG~G 112 (189)
...+|+|+|+.|+ ++++-|+..|.+|+++..+.. ..+.. .-..+..+.. .++.++-..+....|++|-..|+.-
T Consensus 166 ~~VlV~GaG~vG~--~~~~~a~~~Ga~Vi~~~~~~~-~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~ 242 (339)
T 1rjw_A 166 EWVAIYGIGGLGH--VAVQYAKAMGLNVVAVDIGDE-KLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP 242 (339)
T ss_dssp CEEEEECCSTTHH--HHHHHHHHTTCEEEEECSCHH-HHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CEEEEECCCHHHH--HHHHHHHHcCCEEEEEeCCHH-HHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHH
Confidence 4568999866565 455667778889988854221 11110 0111222222 2343322222245677777777656
Q ss_pred hHHHHHHHHH----HHhcCCCCCc------------EEEEeCC-CCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHH
Q 045940 113 TMEELLEMIT----WSQLGIHDKP------------VGVLNVD-GYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDL 175 (189)
Q Consensus 113 TL~El~~~~~----~~~~~~~~kP------------iill~~~-g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~ 175 (189)
++++....+. +..+|....+ +-+.+.. +.++.+.+.+ +++++|-+++.. ..+-.++.+|+
T Consensus 243 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~-~l~~~g~l~~~~--~~~~l~~~~~A 319 (339)
T 1rjw_A 243 AFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEAL-QFAAEGKVKTII--EVQPLEKINEV 319 (339)
T ss_dssp HHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHH-HHHHTTSCCCCE--EEEEGGGHHHH
T ss_pred HHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHH-HHHHcCCCCccE--EEEcHHHHHHH
Confidence 6666554432 0111222122 1112211 1123333333 456777777642 34567788888
Q ss_pred HHHhhc
Q 045940 176 LQGMEV 181 (189)
Q Consensus 176 ~~~l~~ 181 (189)
++.+++
T Consensus 320 ~~~~~~ 325 (339)
T 1rjw_A 320 FDRMLK 325 (339)
T ss_dssp HHHHHT
T ss_pred HHHHHc
Confidence 888765
No 81
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=57.54 E-value=15 Score=29.78 Aligned_cols=71 Identities=17% Similarity=0.146 Sum_probs=42.1
Q ss_pred HHHHHHHHhcCeeEEec---------CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccc
Q 045940 92 ERKAEMARRADAFIALP---------GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSA 162 (189)
Q Consensus 92 ~R~~~m~~~sda~I~lp---------GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~ 162 (189)
+....+...||++|... .|+|+- +.|++. .++|++..+..+.- .+ +...
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~~--~~Ea~a------~G~PvI~~~~~~~~-e~------------i~~~- 321 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGIV--YLEAQA------CGVPVIAGTSGGAP-ET------------VTPA- 321 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCHH--HHHHHH------TTCCEEECSSTTGG-GG------------CCTT-
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCcH--HHHHHH------cCCCEEEeCCCChH-HH------------HhcC-
Confidence 34445678999988743 555553 667774 78999987765322 11 1111
Q ss_pred cCcEEEeCCHHHHHHHhhcCCC
Q 045940 163 RNIVISAKNARDLLQGMEVPNL 184 (189)
Q Consensus 163 ~~~i~~~~~~ee~~~~l~~~~~ 184 (189)
...+.-.+|++++.+.|.+...
T Consensus 322 ~g~~~~~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 322 TGLVVEGSDVDKLSELLIELLD 343 (394)
T ss_dssp TEEECCTTCHHHHHHHHHHHHT
T ss_pred CceEeCCCCHHHHHHHHHHHHh
Confidence 1122222488888888876543
No 82
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=57.39 E-value=63 Score=26.21 Aligned_cols=31 Identities=32% Similarity=0.439 Sum_probs=22.9
Q ss_pred HHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 97 MARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 97 m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
+...+|+|| --||.||+.|.. .+++|++++-
T Consensus 301 lL~~~~~~v-~h~G~~s~~Eal---------~~GvP~v~~P 331 (400)
T 4amg_A 301 LLETCDAII-HHGGSGTLLTAL---------AAGVPQCVIP 331 (400)
T ss_dssp HHTTCSEEE-ECCCHHHHHHHH---------HHTCCEEECC
T ss_pred Hhhhhhhee-ccCCccHHHHHH---------HhCCCEEEec
Confidence 447788754 688999987664 2689999874
No 83
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=57.11 E-value=19 Score=29.24 Aligned_cols=39 Identities=18% Similarity=0.194 Sum_probs=26.7
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv 40 (189)
.+||+|.+++.......--....+..+.+.|+++|+.+.
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V~ 56 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEVS 56 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEEE
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeEE
Confidence 578899999965433223456778899999999998753
No 84
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=56.76 E-value=39 Score=26.89 Aligned_cols=44 Identities=27% Similarity=0.192 Sum_probs=29.3
Q ss_pred HHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCc
Q 045940 98 ARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYY 142 (189)
Q Consensus 98 ~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~ 142 (189)
.+...+.|+|+||. |...+++.+.-..-+..-+.+.+++.+.||
T Consensus 36 ~~~~~~~l~LsgGs-tP~~~y~~L~~~~~~idw~~v~~f~~DEr~ 79 (248)
T 3oc6_A 36 GERGQATIVLTGGG-TGIGLLKRVRERSGEIDWSKVHIYWGDERF 79 (248)
T ss_dssp HHHSCEEEEECCSH-HHHHHHHHHHHTGGGSCGGGEEEEESEEEC
T ss_pred HhCCCEEEEECCCc-cHHHHHHHHHhhccCCCcceEEEEEeeecc
Confidence 34678999999995 767777776642212334567777776666
No 85
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=56.68 E-value=52 Score=26.78 Aligned_cols=140 Identities=14% Similarity=0.131 Sum_probs=70.1
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhc-CCeEEEEecCccccccccC-CCCceEEec-CCHHHHHHHHHH--hcCeeEEecCC
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDG-GCHVLGVIPKALVPIEISG-QTVGDVLIV-SDMHERKAEMAR--RADAFIALPGG 110 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~-gg~viGv~p~~~~~~e~~~-~~~~~~~~~-~~~~~R~~~m~~--~sda~I~lpGG 110 (189)
...+|.|+|..|++ +.+-|+.. +.+|+++-.... ..+... -..+..+.. +++.++-..+.. ..|.++-..|+
T Consensus 173 ~~vlv~GaG~vG~~--a~qla~~~g~~~Vi~~~~~~~-~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~ 249 (345)
T 3jv7_A 173 STAVVIGVGGLGHV--GIQILRAVSAARVIAVDLDDD-RLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGA 249 (345)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHHCCCEEEEEESCHH-HHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCC
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEEcCCHH-HHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCC
Confidence 45688888666665 44555555 568888844321 111110 112233332 234333222222 46777777787
Q ss_pred cchHHHHHHHHHH----HhcCCCC------------CcEEEEeCCCC-chHHHHHHHHHHHcCCCCccccCcEEEeCCHH
Q 045940 111 YGTMEELLEMITW----SQLGIHD------------KPVGVLNVDGY-YDSLLRFFDKGVEEGFIKSSARNIVISAKNAR 173 (189)
Q Consensus 111 ~GTL~El~~~~~~----~~~~~~~------------kPiill~~~g~-~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~e 173 (189)
.-++++....+.- ..+|... +-+-+.....+ ++.+.+ +-+++++|.++.. ...+-.++..
T Consensus 250 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~-~~~l~~~g~l~~~--~~~~~l~~~~ 326 (345)
T 3jv7_A 250 QSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELME-VVALARAGRLDIH--TETFTLDEGP 326 (345)
T ss_dssp HHHHHHHHHHEEEEEEEEECSCCTTCCEEESTTTSCTTCEEECCCSCCHHHHHH-HHHHHHTTCCCCC--EEEECSTTHH
T ss_pred HHHHHHHHHHHhcCCEEEEECCCCCCCCCcCHHHHhCCCEEEEEecCCHHHHHH-HHHHHHcCCCceE--EEEEcHHHHH
Confidence 7677766654421 0112111 11112221111 123333 3356778888762 2456678889
Q ss_pred HHHHHhhc
Q 045940 174 DLLQGMEV 181 (189)
Q Consensus 174 e~~~~l~~ 181 (189)
|+++.+.+
T Consensus 327 ~A~~~~~~ 334 (345)
T 3jv7_A 327 AAYRRLRE 334 (345)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHc
Confidence 99888865
No 86
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=56.53 E-value=51 Score=23.45 Aligned_cols=78 Identities=17% Similarity=0.202 Sum_probs=38.0
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEEecC--CHHHHHHHHHHhcCeeEEecCCcch
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGDVLIVS--DMHERKAEMARRADAFIALPGGYGT 113 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~~~~~~--~~~~R~~~m~~~sda~I~lpGG~GT 113 (189)
...+|.|+|..|.. +++...+.|-.|+.+-.+...........-...+..+ +...-+..-.+.+|++|+..+...+
T Consensus 20 ~~v~IiG~G~iG~~--la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~~ 97 (155)
T 2g1u_A 20 KYIVIFGCGRLGSL--IANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDST 97 (155)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHHH
T ss_pred CcEEEECCCHHHHH--HHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcHH
Confidence 45678887665543 4555566677888885432211111101111222222 2211111114568999988876444
Q ss_pred HH
Q 045940 114 ME 115 (189)
Q Consensus 114 L~ 115 (189)
..
T Consensus 98 ~~ 99 (155)
T 2g1u_A 98 NF 99 (155)
T ss_dssp HH
T ss_pred HH
Confidence 33
No 87
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=55.97 E-value=36 Score=26.59 Aligned_cols=58 Identities=26% Similarity=0.136 Sum_probs=30.3
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc-CCCCChhHHHHHHHHhcCCeEEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYG-GGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~G-Gg~~GlM~a~a~ga~~~gg~viGv 66 (189)
|.+-++|-|-|+++ -.-+.+++.|+++|+.++.. +....--+.+.+...+.|+++..+
T Consensus 1 M~~~k~vlVTGas~--------gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~ 59 (258)
T 3oid_A 1 MEQNKCALVTGSSR--------GVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVV 59 (258)
T ss_dssp --CCCEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCCCEEEEecCCc--------hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 44456666666664 23346667777788876653 433233333334333445555555
No 88
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=55.52 E-value=39 Score=27.61 Aligned_cols=141 Identities=16% Similarity=0.127 Sum_probs=68.0
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCcccccccc-CCCCceEEec---CCHHHHHHHHHH-hcCeeEEecCC
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEIS-GQTVGDVLIV---SDMHERKAEMAR-RADAFIALPGG 110 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~-~~~~~~~~~~---~~~~~R~~~m~~-~sda~I~lpGG 110 (189)
...+|+|++. |+=.++++-|+..|.+|+++..+... .+.. ....+..+.. .++.+.-..+.. ..|++|-..|+
T Consensus 171 ~~vlV~Ga~g-giG~~~~~~a~~~Ga~V~~~~~~~~~-~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~ 248 (347)
T 2hcy_A 171 HWVAISGAAG-GLGSLAVQYAKAMGYRVLGIDGGEGK-EELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVS 248 (347)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEECSTTH-HHHHHHTTCCEEEETTTCSCHHHHHHHHHTSCEEEEEECSSC
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCcEEEEcCCHHH-HHHHHHcCCceEEecCccHhHHHHHHHHhCCCCCEEEECCCc
Confidence 4568999855 55567778888888899888543211 1110 0111222222 233322111111 35777777776
Q ss_pred cchHHHHHHHHH----HHhcCCCC-CcE------------EEEeCC-CCchHHHHHHHHHHHcCCCCccccCcEEEeCCH
Q 045940 111 YGTMEELLEMIT----WSQLGIHD-KPV------------GVLNVD-GYYDSLLRFFDKGVEEGFIKSSARNIVISAKNA 172 (189)
Q Consensus 111 ~GTL~El~~~~~----~~~~~~~~-kPi------------ill~~~-g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ 172 (189)
.-++++.+..+. +..++... .++ -+.+.. +.++.+.+.+ .++++|-+++.. ..+-.++.
T Consensus 249 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~-~l~~~g~l~~~~--~~~~l~~~ 325 (347)
T 2hcy_A 249 EAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREAL-DFFARGLVKSPI--KVVGLSTL 325 (347)
T ss_dssp HHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHH-HHHHTTSCCCCE--EEEEGGGH
T ss_pred HHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHH-HHHHhCCCccce--EEEcHHHH
Confidence 555554443321 00111111 111 112111 1123333333 456777777642 24567788
Q ss_pred HHHHHHhhc
Q 045940 173 RDLLQGMEV 181 (189)
Q Consensus 173 ee~~~~l~~ 181 (189)
+++++.+++
T Consensus 326 ~~A~~~~~~ 334 (347)
T 2hcy_A 326 PEIYEKMEK 334 (347)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHc
Confidence 888888764
No 89
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=54.96 E-value=35 Score=26.99 Aligned_cols=29 Identities=31% Similarity=0.360 Sum_probs=16.1
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 26 ~~lVTGas~-GIG~aia~~la~~G~~V~~~ 54 (279)
T 3sju_A 26 TAFVTGVSS-GIGLAVARTLAARGIAVYGC 54 (279)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 445566555 55555555555555555444
No 90
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=54.62 E-value=6.9 Score=30.89 Aligned_cols=78 Identities=15% Similarity=0.123 Sum_probs=48.9
Q ss_pred cCeeEEecCCcchHHHHHHHHHH--------HhcCCCCCcEEEEeCCCCchHHH--HHHHHHHHcCCC-CccccCcEEEe
Q 045940 101 ADAFIALPGGYGTMEELLEMITW--------SQLGIHDKPVGVLNVDGYYDSLL--RFFDKGVEEGFI-KSSARNIVISA 169 (189)
Q Consensus 101 sda~I~lpGG~GTL~El~~~~~~--------~~~~~~~kPiill~~~g~~~~l~--~~l~~~~~~g~i-~~~~~~~i~~~ 169 (189)
+|++||.|-..+|+.-+..=++- ..+ ..++|+++.-.+ .|.... +-+..+.+.|.+ -+.....+.--
T Consensus 95 aD~mvIaPaSanTlakiA~GiaDnLltraadv~L-k~~~plvl~Pae-m~~~~~~~~Nm~~L~~~G~~iipp~~g~ya~p 172 (209)
T 3zqu_A 95 PNAMVICPCSTGTLSAVATGACNNLIERAADVAL-KERRPLVLVPRE-APFSSIHLENMLKLSNLGAVILPAAPGFYHQP 172 (209)
T ss_dssp CCEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHH-HHTCCEEEEECC-SSCCHHHHHHHHHHHHHTCEECCSCCCCTTCC
T ss_pred cCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHH-hcCCcEEEEEcc-cccCHHHHHHHHHHHHCCCEEeCCCcccccCC
Confidence 89999999999999887542210 111 247999988654 665433 234555666642 12233445566
Q ss_pred CCHHHHHHHhh
Q 045940 170 KNARDLLQGME 180 (189)
Q Consensus 170 ~~~ee~~~~l~ 180 (189)
.+.||+++++.
T Consensus 173 ~~iediv~~vv 183 (209)
T 3zqu_A 173 QSVEDLVDFVV 183 (209)
T ss_dssp CSHHHHHHHHH
T ss_pred CCHHHHHHHHH
Confidence 78899888763
No 91
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=54.58 E-value=22 Score=31.21 Aligned_cols=49 Identities=18% Similarity=0.127 Sum_probs=36.4
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHHH
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFDK 151 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~~ 151 (189)
..|+|||+-| .-||+|-..++.++- ..+|||||.+.- --.|...+++..
T Consensus 167 ~~DG~VItHG-TDTMeeTA~~Lsl~l--~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 220 (435)
T 2d6f_A 167 GADGVVVAHG-TDTMHYTSAALSFML--RTPVPVVFTGAQRSSDRPSSDASLNIQCS 220 (435)
T ss_dssp TCSEEEEECC-TTTHHHHHHHHHHHE--ECSSCEEEECCSSCTTSTTCTHHHHHHHH
T ss_pred CCCeEEEEcC-cchHHHHHHHHHHHh--CCCCCEEEECCCCCCCCCCcchHHHHHHH
Confidence 5799999976 899999999987765 568999998752 134555565553
No 92
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=54.45 E-value=24 Score=29.69 Aligned_cols=49 Identities=22% Similarity=0.255 Sum_probs=34.9
Q ss_pred HhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHH
Q 045940 99 RRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFD 150 (189)
Q Consensus 99 ~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~ 150 (189)
+..|+|||+-| .-||+|-...+.++- ..+|||||.+.- --.|...+++.
T Consensus 87 ~~~dGvVItHG-TDTm~~TA~~L~~~l--~~~kPVVlTGa~rp~~~~~sDg~~NL~~ 140 (334)
T 3nxk_A 87 EGIDGVVITHG-TDTMEETAYFLNLTI--KSDKPVVLVGAMRPSTAISADGPKNLYN 140 (334)
T ss_dssp TTCCEEEEECC-STTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred cCCCeEEEECC-CchHHHHHHHHHHHc--CCCCCEEEECCCCCCCCCCchHHHHHHH
Confidence 34688888775 899999998887654 468999999742 12355555554
No 93
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=54.22 E-value=14 Score=31.06 Aligned_cols=48 Identities=21% Similarity=0.241 Sum_probs=34.8
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHH
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFD 150 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~ 150 (189)
..|+|||+-| .-||+|-..++.++- ..+|||||.+.- --.|...+++.
T Consensus 85 ~~dG~VItHG-TDTmeeTA~~Ls~~l--~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 137 (327)
T 1o7j_A 85 DVDGVVITHG-TDTVEESAYFLHLTV--KSDKPVVFVAAMRPATAISADGPMNLLE 137 (327)
T ss_dssp TCCEEEEECC-STTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred CCCEEEEecC-chhHHHHHHHHHHHh--CCCCCEEEeCCCCCCCCCCCchHHHHHH
Confidence 3689999876 899999999887654 278999998752 12345555554
No 94
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=53.72 E-value=13 Score=30.81 Aligned_cols=41 Identities=29% Similarity=0.390 Sum_probs=27.7
Q ss_pred HHHHHHHCCC-eEEEcCCCCChhHHHHHHHHhcC-CeEEEEecC
Q 045940 28 LATQLVERKI-NLVYGGGSVGLMGLVSQTIFDGG-CHVLGVIPK 69 (189)
Q Consensus 28 lg~~la~~g~-~lv~GGg~~GlM~a~a~ga~~~g-g~viGv~p~ 69 (189)
+.+.++..++ .||..||. |.+..++.+..+.+ ...+|++|.
T Consensus 72 ~~~~~~~~~~d~vvv~GGD-GTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 72 EAERAMHENYDVLIAAGGD-GTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHHTTTTCSEEEEEECH-HHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred HHHHHhhcCCCEEEEEcCc-hHHHHHHHHHHhCCCCCcEEEecC
Confidence 3334444454 36666777 99999999986543 456899884
No 95
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=53.48 E-value=15 Score=30.92 Aligned_cols=49 Identities=20% Similarity=0.242 Sum_probs=35.4
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHHH
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFDK 151 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~~ 151 (189)
..|+|||+-| .-||+|-..++.++- ..+|||||.+.- --.|...+++.-
T Consensus 82 ~~dG~VItHG-TDTmeeTA~~Ls~~l--~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 135 (331)
T 1agx_A 82 SVNGVVITHG-TDTMEETAFFLNLVV--HTDKPIVLVGSMRPSTALSADGPLNLYSA 135 (331)
T ss_dssp TCCEEEEECC-GGGHHHHHHHHHHHC--CCSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEecC-cchHHHHHHHHHHHc--CCCCCEEEeCCCCCCCCCCchhHHHHHHH
Confidence 3689999875 899999998887654 278999999652 134555665553
No 96
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=53.45 E-value=15 Score=31.06 Aligned_cols=48 Identities=25% Similarity=0.365 Sum_probs=35.0
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHH
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFD 150 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~ 150 (189)
..|+|||+-| .-||+|-..++.++- ..+|||||.+.- -..|...+++.
T Consensus 90 ~~dGvVItHG-TDTm~~TA~~L~~~l--~~~kPVVlTGa~rp~~~~~sDg~~NL~~ 142 (337)
T 4pga_A 90 DVDGIVITHG-TDTLEETAYFLNLVQ--KTDKPIVVVGSMRPGTAMSADGMLNLYN 142 (337)
T ss_dssp TCSEEEEECC-STTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred CCCeEEEECC-CccHHHHHHHHHHHc--CCCCCEEEeCCCCCCCCCCchhHHHHHH
Confidence 4688988875 899999999988764 468999998652 13455555554
No 97
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=53.21 E-value=8.6 Score=32.07 Aligned_cols=40 Identities=20% Similarity=0.332 Sum_probs=25.0
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|+| ++|+|++|......+.=...|..+.+.|-+.||.++.
T Consensus 1 M~k-kkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~~ 40 (357)
T 4fu0_A 1 MQN-KKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIP 40 (357)
T ss_dssp -CC-EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCC-CEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEEE
Confidence 666 4666664433322344466788888888888988753
No 98
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=53.13 E-value=57 Score=26.35 Aligned_cols=32 Identities=19% Similarity=0.367 Sum_probs=23.8
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
...+|+|++. |+=.++++-|+..|.+|+++..
T Consensus 151 ~~vlI~Ga~g-~iG~~~~~~a~~~Ga~Vi~~~~ 182 (336)
T 4b7c_A 151 ETVVISGAAG-AVGSVAGQIARLKGCRVVGIAG 182 (336)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEeC
Confidence 4568888844 5556677888888999998854
No 99
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=52.81 E-value=29 Score=29.96 Aligned_cols=101 Identities=14% Similarity=0.098 Sum_probs=55.0
Q ss_pred HHHHHHHHH---CCCeEEEcCCCCC------hhHHHHHHHHhcCCeEEEEecCc--cccccccCCC--CceEEecCCHHH
Q 045940 26 LDLATQLVE---RKINLVYGGGSVG------LMGLVSQTIFDGGCHVLGVIPKA--LVPIEISGQT--VGDVLIVSDMHE 92 (189)
Q Consensus 26 ~~lg~~la~---~g~~lv~GGg~~G------lM~a~a~ga~~~gg~viGv~p~~--~~~~e~~~~~--~~~~~~~~~~~~ 92 (189)
.++-++|.+ +...+|++|.. | .+..++++..+.+-+++=++... ..+.+..... -....+++..+.
T Consensus 264 ~~~~~wl~~~~~~~vv~vs~GS~-~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq 342 (463)
T 2acv_A 264 DLILKWLDEQPDKSVVFLCFGSM-GVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQ 342 (463)
T ss_dssp HHHHHHHHTSCTTCEEEEECCSS-CCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCH
T ss_pred hhHHHHHhcCCCCceEEEEeccc-cccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCH
Confidence 345567754 35667778776 6 36667776666677777665431 1111100000 012334444443
Q ss_pred HHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 93 RKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 93 R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
. .+|...+=..++--||.||..|.. .+++|++++-
T Consensus 343 ~-~vL~h~~~~~fvth~G~~s~~Eal---------~~GvP~i~~P 377 (463)
T 2acv_A 343 V-EVLAHKAIGGFVSHCGWNSILESM---------WFGVPILTWP 377 (463)
T ss_dssp H-HHHHSTTEEEEEECCCHHHHHHHH---------HTTCCEEECC
T ss_pred H-HHhCCCccCeEEecCCchhHHHHH---------HcCCCeeecc
Confidence 3 344322333555678899987764 3789999884
No 100
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=52.77 E-value=19 Score=29.08 Aligned_cols=43 Identities=16% Similarity=0.119 Sum_probs=31.1
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVG 47 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~G 47 (189)
++|+|.+|......+.-...++.+.+.|.+.||.++.=....+
T Consensus 14 ~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~ 56 (317)
T 4eg0_A 14 GKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAER 56 (317)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS
T ss_pred ceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 5788888765544454578899999999999999765443324
No 101
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=52.47 E-value=97 Score=25.47 Aligned_cols=143 Identities=12% Similarity=0.095 Sum_probs=70.8
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEEec----CCHHHHHHHHH-HhcCeeEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIPKALVPIEISG-QTVGDVLIV----SDMHERKAEMA-RRADAFIALP 108 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p~~~~~~e~~~-~~~~~~~~~----~~~~~R~~~m~-~~sda~I~lp 108 (189)
...+|+|+|+.|++ +.+-|+..|. +|+++-.... ..+... -..+..+.. .++.++-..+. ...|++|-..
T Consensus 197 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~ 273 (376)
T 1e3i_A 197 STCAVFGLGCVGLS--AIIGCKIAGASRIIAIDINGE-KFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCA 273 (376)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEECSCGG-GHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCeEEEEcCCHH-HHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECC
Confidence 34688987666665 4555667787 7888843221 111111 112233322 23543322222 1468888888
Q ss_pred CCcchHHHHHHHHHHH-----hcCCCCCcEE-----------EEeCC-CCc--hHHHHHHHHHHHcCCCCccc-cCcEEE
Q 045940 109 GGYGTMEELLEMITWS-----QLGIHDKPVG-----------VLNVD-GYY--DSLLRFFDKGVEEGFIKSSA-RNIVIS 168 (189)
Q Consensus 109 GG~GTL~El~~~~~~~-----~~~~~~kPii-----------ll~~~-g~~--~~l~~~l~~~~~~g~i~~~~-~~~i~~ 168 (189)
|+.-++++.+..+... .+|....++- +.+.. +.| ...+..+-.++++|-++.+. ....+-
T Consensus 274 G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~ 353 (376)
T 1e3i_A 274 GTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALP 353 (376)
T ss_dssp CCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEE
T ss_pred CCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccCeEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeec
Confidence 8766777665554211 0111111211 11111 111 12222233556778777543 244566
Q ss_pred eCCHHHHHHHhhc
Q 045940 169 AKNARDLLQGMEV 181 (189)
Q Consensus 169 ~~~~ee~~~~l~~ 181 (189)
.++.+|+++.+++
T Consensus 354 l~~~~~A~~~~~~ 366 (376)
T 1e3i_A 354 FESINDAIDLMKE 366 (376)
T ss_dssp GGGHHHHHHHHHT
T ss_pred HHHHHHHHHHHhc
Confidence 7888888888864
No 102
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=52.44 E-value=27 Score=28.60 Aligned_cols=32 Identities=34% Similarity=0.412 Sum_probs=24.2
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhc-CCeEEEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDG-GCHVLGVIP 68 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~-gg~viGv~p 68 (189)
...+|+|+|. |+=.++++-|... |.+|+++-.
T Consensus 172 ~~vlV~Gagg-~iG~~~~~~a~~~~Ga~Vi~~~~ 204 (347)
T 1jvb_A 172 KTLLVVGAGG-GLGTMAVQIAKAVSGATIIGVDV 204 (347)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHHTCCEEEEEES
T ss_pred CEEEEECCCc-cHHHHHHHHHHHcCCCeEEEEcC
Confidence 4569999985 6666677778888 889888854
No 103
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=52.35 E-value=97 Score=25.44 Aligned_cols=143 Identities=17% Similarity=0.158 Sum_probs=68.8
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEEec----CCHHHHHHHHH-HhcCeeEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIPKALVPIEISG-QTVGDVLIV----SDMHERKAEMA-RRADAFIALP 108 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p~~~~~~e~~~-~~~~~~~~~----~~~~~R~~~m~-~~sda~I~lp 108 (189)
...+|+|+|..|++ +.+-|+..|. +|+++-.... ..+... -..+..+.. .++.+.-..+. ...|++|-..
T Consensus 194 ~~VlV~GaG~vG~~--a~qla~~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 270 (374)
T 1cdo_A 194 STCAVFGLGAVGLA--AVMGCHSAGAKRIIAVDLNPD-KFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECV 270 (374)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEECSCGG-GHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEEcCCHH-HHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECC
Confidence 35688987655554 4556777787 7888843221 111110 112233322 23433222221 1368888877
Q ss_pred CCcchHHHHHHHHHHH-----hcCCCC-CcEE-----------EEeCC-CCc--hHHHHHHHHHHHcCCCCccc-cCcEE
Q 045940 109 GGYGTMEELLEMITWS-----QLGIHD-KPVG-----------VLNVD-GYY--DSLLRFFDKGVEEGFIKSSA-RNIVI 167 (189)
Q Consensus 109 GG~GTL~El~~~~~~~-----~~~~~~-kPii-----------ll~~~-g~~--~~l~~~l~~~~~~g~i~~~~-~~~i~ 167 (189)
|+.-++++.+..+.-. .+|... .++- +.+.. +.| ...+..+-.++++|-++.+. ....+
T Consensus 271 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~ 350 (374)
T 1cdo_A 271 GNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKGKDGVPKMVKAYLDKKVKLDEFITHRM 350 (374)
T ss_dssp CCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEEE
T ss_pred CCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCCeEEEEecCCCCcHHHHHHHHHHHHcCCCChHHheeeEe
Confidence 7766666655443211 011111 1211 11111 011 12222233566777776532 24455
Q ss_pred EeCCHHHHHHHhhc
Q 045940 168 SAKNARDLLQGMEV 181 (189)
Q Consensus 168 ~~~~~ee~~~~l~~ 181 (189)
-.++.+|+++.+++
T Consensus 351 ~l~~~~~A~~~~~~ 364 (374)
T 1cdo_A 351 PLESVNDAIDLMKH 364 (374)
T ss_dssp EGGGHHHHHHHHHT
T ss_pred cHHHHHHHHHHHHC
Confidence 67888888888864
No 104
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=52.22 E-value=29 Score=29.87 Aligned_cols=113 Identities=12% Similarity=0.006 Sum_probs=56.7
Q ss_pred HHHHHHH---CCCeEEEcCCCCCh-----hHHHHHHHHhcCCeEEEEecCccccccccCCC----CceEEecCCHHHHHH
Q 045940 28 LATQLVE---RKINLVYGGGSVGL-----MGLVSQTIFDGGCHVLGVIPKALVPIEISGQT----VGDVLIVSDMHERKA 95 (189)
Q Consensus 28 lg~~la~---~g~~lv~GGg~~Gl-----M~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~----~~~~~~~~~~~~R~~ 95 (189)
+-++|.+ +...+|++|.. |. +..++++..+.+-+++=++...... ..+.+. -....+.+..+.. .
T Consensus 261 ~~~wl~~~~~~~vv~vs~GS~-~~~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~-~l~~~~~~~~~~~~~v~~w~pq~-~ 337 (456)
T 2c1x_A 261 CLQWLKERKPTSVVYISFGTV-TTPPPAEVVALSEALEASRVPFIWSLRDKARV-HLPEGFLEKTRGYGMVVPWAPQA-E 337 (456)
T ss_dssp HHHHHHTSCTTCEEEEECCSS-CCCCHHHHHHHHHHHHHHTCCEEEECCGGGGG-GSCTTHHHHHTTTEEEESCCCHH-H
T ss_pred HHHHHhcCCCcceEEEecCcc-ccCCHHHHHHHHHHHHhcCCeEEEEECCcchh-hCCHHHHhhcCCceEEecCCCHH-H
Confidence 4455543 45667777765 53 5566666555666666554322110 111100 0123344444443 3
Q ss_pred HHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHc
Q 045940 96 EMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEE 155 (189)
Q Consensus 96 ~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~ 155 (189)
+|...+=.+++--||+||..|.. .+++|++++-. +.|... ..+.+.+.
T Consensus 338 vL~h~~~~~fvth~G~~S~~Eal---------~~GvP~i~~P~--~~dQ~~-Na~~l~~~ 385 (456)
T 2c1x_A 338 VLAHEAVGAFVTHCGWNSLWESV---------AGGVPLICRPF--FGDQRL-NGRMVEDV 385 (456)
T ss_dssp HHTSTTEEEEEECCCHHHHHHHH---------HHTCCEEECCC--STTHHH-HHHHHHHT
T ss_pred HhcCCcCCEEEecCCcchHHHHH---------HhCceEEecCC--hhhHHH-HHHHHHHH
Confidence 33221223555678899987764 26899998842 344332 23444444
No 105
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=52.00 E-value=15 Score=30.90 Aligned_cols=48 Identities=21% Similarity=0.261 Sum_probs=34.6
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHH
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFD 150 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~ 150 (189)
..|+|||+-| .-||+|-..++.++- ..+|||||.+.- --.|...++++
T Consensus 85 ~~dG~VItHG-TDTmeeTA~~Ls~~l--~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 137 (332)
T 2wlt_A 85 RIQGVVITHG-TDTLEESAYFLNLVL--HSTKPVVLVGAMRNASSLSADGALNLYE 137 (332)
T ss_dssp TCCEEEEECC-SSSHHHHHHHHHHHC--CCSSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred CCCEEEEecC-chhHHHHHHHHHHHh--CCCCCEEEECCCCCCCCCCcchHHHHHH
Confidence 3689999875 899999998887654 278999998752 12345555554
No 106
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=51.81 E-value=11 Score=28.25 Aligned_cols=34 Identities=15% Similarity=0.092 Sum_probs=21.8
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHH-CCCe
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVE-RKIN 38 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~-~g~~ 38 (189)
+.|++|.|+.+|..+ .-.+.|+.+.+.+.+ .|+.
T Consensus 2 ~~M~kiliiy~S~~G---nT~~~a~~i~~~l~~~~g~~ 36 (188)
T 2ark_A 2 NAMGKVLVIYDTRTG---NTKKMAELVAEGARSLEGTE 36 (188)
T ss_dssp CCCEEEEEEECCSSS---HHHHHHHHHHHHHHTSTTEE
T ss_pred CCCCEEEEEEECCCc---HHHHHHHHHHHHHhhcCCCe
Confidence 467778777777544 234666677777766 5543
No 107
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=51.28 E-value=10 Score=32.16 Aligned_cols=41 Identities=22% Similarity=0.333 Sum_probs=30.6
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|.+.++|+|.+|......+.=...|..+.+.|-+.+|.++.
T Consensus 1 ~~~~~~v~vl~GG~S~E~evSl~Sa~~v~~~l~~~~~~v~~ 41 (372)
T 3tqt_A 1 MAEKLHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLISV 41 (372)
T ss_dssp -CCSEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCCCCEEEEEeccCCCccHhHHHHHHHHHHHHhhcCceEEE
Confidence 55566777776666555677789999999999888888654
No 108
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=51.13 E-value=15 Score=29.99 Aligned_cols=41 Identities=17% Similarity=0.224 Sum_probs=28.6
Q ss_pred HHHHHHHHCCC-eEEEcCCCCChhHHHHHHHHhc-CCeEEEEecC
Q 045940 27 DLATQLVERKI-NLVYGGGSVGLMGLVSQTIFDG-GCHVLGVIPK 69 (189)
Q Consensus 27 ~lg~~la~~g~-~lv~GGg~~GlM~a~a~ga~~~-gg~viGv~p~ 69 (189)
++.+.+++ ++ .||..||. |....++.+.... ....+|++|.
T Consensus 55 ~~~~~~~~-~~d~vv~~GGD-GTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 55 KYCQEFAS-KVDLIIVFGGD-GTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp HHHHHHTT-TCSEEEEEECH-HHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred HHHHHhhc-CCCEEEEEccc-hHHHHHHHHHhhCCCCCcEEEecC
Confidence 34444443 44 46666777 9999999998773 3567999994
No 109
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=51.06 E-value=65 Score=26.95 Aligned_cols=42 Identities=17% Similarity=0.265 Sum_probs=31.8
Q ss_pred HHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 23 DAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 23 ~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
..++++++.|-++|..+|+.... .| .+.++|.+.|-.+||+=
T Consensus 195 ~kg~~~a~~l~~~G~DvIf~~~d--~~-Gv~~aa~e~Gv~vIG~D 236 (356)
T 3s99_A 195 GKEADAAKALIDQGVDIITQHTD--ST-AAIQVAHDRGIKAFGQA 236 (356)
T ss_dssp HHHHHHHHHHHHTTCSEEEESSS--SS-HHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHHhCCCcEEEECCC--ch-HHHHHHHHcCCEEEEEc
Confidence 55667777777789999987643 34 46677888999999993
No 110
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=51.01 E-value=21 Score=29.97 Aligned_cols=51 Identities=14% Similarity=0.087 Sum_probs=35.7
Q ss_pred HhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHHH
Q 045940 99 RRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFDK 151 (189)
Q Consensus 99 ~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~~ 151 (189)
+..|+|||+-| .-||+|-..++.++-. ..+|||||.+.- --.|...++++-
T Consensus 72 ~~~dG~VItHG-TDTmeeTA~~Ls~ll~-~~~kPVVlTGAqrP~~~~~sDg~~NL~~A 127 (328)
T 1wls_A 72 WEYDGIVITHG-TDTMAYSASMLSFMLR-NPPIPIVLTGSMLPITEKNSDAPFNLRTA 127 (328)
T ss_dssp TTCSEEEEECC-GGGHHHHHHHHHHHEE-SCSSEEEEECCSSCTTSSSCSHHHHHHHH
T ss_pred ccCCeEEEEcC-CchHHHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCCchHHHHHHH
Confidence 35789999976 8999999888874322 468999998752 134556665553
No 111
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=50.88 E-value=23 Score=28.44 Aligned_cols=37 Identities=22% Similarity=0.272 Sum_probs=25.0
Q ss_pred CCCC-eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 1 MGKF-KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 1 ~~~~-~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|++| ++|.++++.. .-....+..|++.|+++||.+..
T Consensus 2 M~~m~mkIl~~~~~~----gG~~~~~~~la~~L~~~G~~V~v 39 (364)
T 1f0k_A 2 MSGQGKRLMVMAGGT----GGHVFPGLAVAHHLMAQGWQVRW 39 (364)
T ss_dssp -----CEEEEECCSS----HHHHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCCCcEEEEEeCCC----ccchhHHHHHHHHHHHcCCEEEE
Confidence 5666 7899887432 25667788999999999988543
No 112
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=50.39 E-value=12 Score=26.66 Aligned_cols=68 Identities=15% Similarity=0.094 Sum_probs=40.5
Q ss_pred HHHHHHhcCeeEEec--CCcchHHHHHHHHHHHhcCCCCC-cEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeC
Q 045940 94 KAEMARRADAFIALP--GGYGTMEELLEMITWSQLGIHDK-PVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAK 170 (189)
Q Consensus 94 ~~~m~~~sda~I~lp--GG~GTL~El~~~~~~~~~~~~~k-Piill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~ 170 (189)
...+...||++|.-. -|+|.- +.|++. .++ ||+..+..|....+. .. ...+...+
T Consensus 68 ~~~~~~~adv~v~ps~~e~~~~~--~~Eama------~G~vPvi~~~~~~~~~~~~------------~~--~~~~~~~~ 125 (166)
T 3qhp_A 68 LLEILKTCTLYVHAANVESEAIA--CLEAIS------VGIVPVIANSPLSATRQFA------------LD--ERSLFEPN 125 (166)
T ss_dssp HHHHHTTCSEEEECCCSCCCCHH--HHHHHH------TTCCEEEECCTTCGGGGGC------------SS--GGGEECTT
T ss_pred HHHHHHhCCEEEECCcccCccHH--HHHHHh------cCCCcEEeeCCCCchhhhc------------cC--CceEEcCC
Confidence 345678899887643 355543 567774 787 998844333222211 11 12356667
Q ss_pred CHHHHHHHhhcCC
Q 045940 171 NARDLLQGMEVPN 183 (189)
Q Consensus 171 ~~ee~~~~l~~~~ 183 (189)
|++++.+.|.+..
T Consensus 126 ~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 126 NAKDLSAKIDWWL 138 (166)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8999888887643
No 113
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=50.30 E-value=8.2 Score=30.45 Aligned_cols=85 Identities=14% Similarity=0.104 Sum_probs=51.6
Q ss_pred HHHhcCeeEEecCCcchHHHHHHHHHHHh-----cC-CCCCcEEEEeC--CCCchH--HHHHHHHHHHcCC--CCccccC
Q 045940 97 MARRADAFIALPGGYGTMEELLEMITWSQ-----LG-IHDKPVGVLNV--DGYYDS--LLRFFDKGVEEGF--IKSSARN 164 (189)
Q Consensus 97 m~~~sda~I~lpGG~GTL~El~~~~~~~~-----~~-~~~kPiill~~--~g~~~~--l~~~l~~~~~~g~--i~~~~~~ 164 (189)
+...+|++||.|-..+|+.-+..=++-.- .. ..++|+++.-. ..+|+. ....|++|.+.|+ +++....
T Consensus 93 l~~~aD~mvIaPaTanTlAKiA~GiaDnLlt~~~~A~d~~~pvvlaPaMN~~M~e~P~t~~nl~~L~~~G~~ivpP~~g~ 172 (209)
T 1mvl_A 93 LRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKR 172 (209)
T ss_dssp HHHHCSEEEEEEECHHHHHHHHHTCCSSHHHHHHHTCCTTSCEEEEECCCHHHHHSHHHHHHHHHHHHHTCEECCCBC--
T ss_pred hcccCCEEEEecCCHHHHHHHHccccCcHHHHHHHHhcCCCCEEEEECCChhHhhChhHHHHHHHHHHCCCEEeCCcccc
Confidence 34679999999999999988764322111 11 13799998732 247752 2345667777774 3333211
Q ss_pred cE------EEeCCHHHHHHHhhc
Q 045940 165 IV------ISAKNARDLLQGMEV 181 (189)
Q Consensus 165 ~i------~~~~~~ee~~~~l~~ 181 (189)
.- --..++|++++.+..
T Consensus 173 lacg~~G~gr~~~~~~Iv~~v~~ 195 (209)
T 1mvl_A 173 LASGDYGNGAMAEPSLIYSTVRL 195 (209)
T ss_dssp -------CCBCCCHHHHHHHHHH
T ss_pred ccCCCcCCCCCCCHHHHHHHHHH
Confidence 10 135689999988864
No 114
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=49.53 E-value=19 Score=30.16 Aligned_cols=40 Identities=23% Similarity=0.363 Sum_probs=25.5
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHH-HHCCCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQL-VERKINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~l-a~~g~~lv~ 41 (189)
|+|| +|+|.+|......+.=...|+.+.+.| .+.||.++.
T Consensus 1 m~k~-~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~ 41 (377)
T 1ehi_A 1 MTKK-RVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIV 41 (377)
T ss_dssp --CE-EEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEE
T ss_pred CCCc-EEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEE
Confidence 6665 566665544332333367789999999 899998765
No 115
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=49.20 E-value=16 Score=31.03 Aligned_cols=73 Identities=15% Similarity=0.101 Sum_probs=40.7
Q ss_pred eEEecCCH-HHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCcc
Q 045940 83 DVLIVSDM-HERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSS 161 (189)
Q Consensus 83 ~~~~~~~~-~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~ 161 (189)
.+.+.+.+ ...-..++..||++|.=+ |++. .|+. ..++|++++...+=|..+ ++.|
T Consensus 283 ~v~l~~~l~~~~~~~l~~~ad~vv~~S---Gg~~--~EA~------a~g~PvV~~~~~~~~~e~-------v~~g----- 339 (403)
T 3ot5_A 283 RIHLIEPLDAIDFHNFLRKSYLVFTDS---GGVQ--EEAP------GMGVPVLVLRDTTERPEG-------IEAG----- 339 (403)
T ss_dssp TEEEECCCCHHHHHHHHHHEEEEEECC---HHHH--HHGG------GTTCCEEECCSSCSCHHH-------HHHT-----
T ss_pred CEEEeCCCCHHHHHHHHHhcCEEEECC---ccHH--HHHH------HhCCCEEEecCCCcchhh-------eeCC-----
Confidence 34455544 345566778999876433 5554 4555 378999988432334332 2222
Q ss_pred ccCcEEEe-CCHHHHHHHhhc
Q 045940 162 ARNIVISA-KNARDLLQGMEV 181 (189)
Q Consensus 162 ~~~~i~~~-~~~ee~~~~l~~ 181 (189)
....+ .|++++.+.+.+
T Consensus 340 ---~~~lv~~d~~~l~~ai~~ 357 (403)
T 3ot5_A 340 ---TLKLIGTNKENLIKEALD 357 (403)
T ss_dssp ---SEEECCSCHHHHHHHHHH
T ss_pred ---cEEEcCCCHHHHHHHHHH
Confidence 12333 377777776654
No 116
>1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2
Probab=48.86 E-value=13 Score=29.42 Aligned_cols=33 Identities=12% Similarity=0.126 Sum_probs=21.0
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|+.+++|.|.|++.. .-+.+.+.|.++|+.++.
T Consensus 1 M~~~~~ilVtGatG~--------iG~~l~~~L~~~g~~V~~ 33 (308)
T 1qyc_A 1 MGSRSRILLIGATGY--------IGRHVAKASLDLGHPTFL 33 (308)
T ss_dssp -CCCCCEEEESTTST--------THHHHHHHHHHTTCCEEE
T ss_pred CCCCCEEEEEcCCcH--------HHHHHHHHHHhCCCCEEE
Confidence 666788999998753 233555666667776654
No 117
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=48.77 E-value=27 Score=29.65 Aligned_cols=50 Identities=22% Similarity=0.247 Sum_probs=35.3
Q ss_pred HhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHH
Q 045940 99 RRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFD 150 (189)
Q Consensus 99 ~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~ 150 (189)
+..|+|||+-| .-||+|-..++.++- ...+|||||.+.- --.|...++++
T Consensus 100 ~~~dG~VItHG-TDTmeeTA~~Ls~~l-~~~~kPVVlTGAmrP~~~~~sDg~~NL~~ 154 (358)
T 2him_A 100 DDYDGFVILHG-TDTMAYTASALSFML-ENLGKPVIVTGSQIPLAELRSDGQINLLN 154 (358)
T ss_dssp GGCSEEEEECC-STTHHHHHHHHHHHE-ETCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred hcCCeEEEecC-chHHHHHHHHHHHHH-hcCCCCEEEeCCCCCCcCCCcchHHHHHH
Confidence 35789999975 899999998887653 1258999998752 13345555554
No 118
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=48.55 E-value=34 Score=28.62 Aligned_cols=49 Identities=22% Similarity=0.283 Sum_probs=35.4
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHHH
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFDK 151 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~~ 151 (189)
..|+|||+-| .-||+|-..++.++- ..+|||||.+.- --.|...++++-
T Consensus 83 ~~dG~VItHG-TDTmeeTA~~Ls~~l--~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 136 (330)
T 1wsa_A 83 ETEAVIITHG-TDTMEETAFFLNLTV--KSQKPVVLVGAMRPGSSMSADGPMNLYNA 136 (330)
T ss_dssp TCCCEEEECC-SSSHHHHHHHHHHHC--CCSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEEcC-cchHHHHHHHHHHHc--CCCCCEEEeCCCCCCCCCCCchHHHHHHH
Confidence 3689999976 899999999887654 278999998752 133455565553
No 119
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=48.04 E-value=60 Score=24.17 Aligned_cols=28 Identities=11% Similarity=0.177 Sum_probs=14.4
Q ss_pred eEEEcCCCCChhHHHHHHHH-hcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIF-DGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~-~~gg~viGv 66 (189)
.+|+||.. |+=.++++... +.|-+|+.+
T Consensus 8 vlVtGasg-~iG~~~~~~l~~~~g~~V~~~ 36 (221)
T 3r6d_A 8 ITILGAAG-QIAQXLTATLLTYTDMHITLY 36 (221)
T ss_dssp EEEESTTS-HHHHHHHHHHHHHCCCEEEEE
T ss_pred EEEEeCCc-HHHHHHHHHHHhcCCceEEEE
Confidence 35555544 55555555555 445455444
No 120
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=47.36 E-value=12 Score=26.79 Aligned_cols=34 Identities=12% Similarity=0.138 Sum_probs=22.4
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv 40 (189)
++.++|+|+|.|... + +.++.+-+.|-+.||.|+
T Consensus 2 ~~p~siAVVGaS~~~-~----~~g~~v~~~L~~~g~~V~ 35 (122)
T 3ff4_A 2 NAMKKTLILGATPET-N----RYAYLAAERLKSHGHEFI 35 (122)
T ss_dssp CCCCCEEEETCCSCT-T----SHHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEEccCCCC-C----CHHHHHHHHHHHCCCeEE
Confidence 467899999988653 2 234456666666677543
No 121
>3v2d_S 50S ribosomal protein L18; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_M 2hgj_R 2hgq_R 2hgu_R 1vsa_M 2j03_S 2jl6_S 2jl8_S 2v47_S 2v49_S 2wdi_S 2wdj_S 2wdl_S 2wdn_S 2wh2_S 2wh4_S 2wrj_S 2wrl_S 2wro_S 2wrr_S ...
Probab=47.27 E-value=30 Score=24.61 Aligned_cols=41 Identities=20% Similarity=0.325 Sum_probs=30.7
Q ss_pred HHHHHHHHHHHHHHC----CCe-EEE--cCC-CCChhHHHHHHHHhcCC
Q 045940 21 FSDAALDLATQLVER----KIN-LVY--GGG-SVGLMGLVSQTIFDGGC 61 (189)
Q Consensus 21 ~~~~A~~lg~~la~~----g~~-lv~--GGg-~~GlM~a~a~ga~~~gg 61 (189)
-.+.|+.+|+.||++ |+. +|+ ||. .-|-..|++++|.++|-
T Consensus 62 n~~AA~~vG~llA~ra~~~GI~~vvfDrgg~~yhGrV~Ala~~are~GL 110 (112)
T 3v2d_S 62 KTEVARQVGRALAEKALALGIKQVAFDRGPYKYHGRVKALAEGAREGGL 110 (112)
T ss_dssp HHHHHHHHHHHHHHHHHTTTCCBCEEECTTSCSCSSTTHHHHHHHHTTC
T ss_pred CHHHHHHHHHHHHHHHHHCCCCEEEEecCCCcccHHHHHHHHHHHHcCC
Confidence 568899999999883 655 333 542 25899999999999873
No 122
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=46.77 E-value=66 Score=22.70 Aligned_cols=74 Identities=18% Similarity=0.077 Sum_probs=39.0
Q ss_pred CCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccc---c-ccccCCCCceEEecC--CHHHHHHHHHHhcCeeEEec
Q 045940 35 RKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALV---P-IEISGQTVGDVLIVS--DMHERKAEMARRADAFIALP 108 (189)
Q Consensus 35 ~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~---~-~e~~~~~~~~~~~~~--~~~~R~~~m~~~sda~I~lp 108 (189)
+++.+|.|+|..| ..+++...+.|-.++.+-++... . .+..... .+.+..+ +...-+..-++.+|++|+..
T Consensus 3 ~~~vlI~G~G~vG--~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~-~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGHSILA--INTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDN-ADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCSHHH--HHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTT-CEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECCCHHH--HHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCC-CeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 3567888887655 56666666777788888553110 0 0000111 1233222 22221222256789999988
Q ss_pred CCc
Q 045940 109 GGY 111 (189)
Q Consensus 109 GG~ 111 (189)
+.-
T Consensus 80 ~~d 82 (153)
T 1id1_A 80 DND 82 (153)
T ss_dssp SCH
T ss_pred CCh
Confidence 764
No 123
>1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A*
Probab=46.65 E-value=20 Score=28.80 Aligned_cols=33 Identities=15% Similarity=0.292 Sum_probs=20.6
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHC--CCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVER--KINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~--g~~lv~ 41 (189)
|+.|++|.|.|++. -....+.+.|+++ |+.|+.
T Consensus 1 Ms~m~~vlVTGatG--------~iG~~l~~~L~~~~~g~~V~~ 35 (348)
T 1oc2_A 1 MSQFKNIIVTGGAG--------FIGSNFVHYVYNNHPDVHVTV 35 (348)
T ss_dssp --CCSEEEEETTTS--------HHHHHHHHHHHHHCTTCEEEE
T ss_pred CCcCcEEEEeCCcc--------HHHHHHHHHHHHhCCCCEEEE
Confidence 67788899998875 2344566666666 676653
No 124
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=46.13 E-value=40 Score=26.77 Aligned_cols=36 Identities=14% Similarity=0.121 Sum_probs=30.4
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCC
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKI 37 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~ 37 (189)
++.++|+|||||=++.+--+...+++..+.+...+.
T Consensus 3 ~~~~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~ 38 (252)
T 1nup_A 3 SRIPVVLLACGSFNPITNMHLRMFEVARDHLHQTGM 38 (252)
T ss_dssp CCEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCCceEEEEEecCcHhhHHHHHHHHHHHHHhcccCC
Confidence 677899999999999888889888888887777653
No 125
>1qzu_A Hypothetical protein MDS018; alpha-beta sandwich, lyase; HET: FMN; 2.91A {Homo sapiens} SCOP: c.34.1.1
Probab=46.07 E-value=2.6 Score=33.22 Aligned_cols=89 Identities=13% Similarity=0.133 Sum_probs=47.4
Q ss_pred HHHhcCeeEEecCCcchHHHHHHHHH-----HHhcC-CCCCcEEEEeC--CCCchH--HHHHHHHHHHcCC--CCcccc-
Q 045940 97 MARRADAFIALPGGYGTMEELLEMIT-----WSQLG-IHDKPVGVLNV--DGYYDS--LLRFFDKGVEEGF--IKSSAR- 163 (189)
Q Consensus 97 m~~~sda~I~lpGG~GTL~El~~~~~-----~~~~~-~~~kPiill~~--~g~~~~--l~~~l~~~~~~g~--i~~~~~- 163 (189)
+.+.+|++||.|-..+|+.-+..=++ ..-.. ..++|+++.-. ...|.. ..+.++.+.+.|+ +++...
T Consensus 93 l~~~aD~~vIaPaTanTlAKiA~GiaDnLlt~~~~alk~~~pvvlaPaMn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~ 172 (206)
T 1qzu_A 93 LRRWADLLLVAPLDANTLGKVASGICDNLLTCVMRAWDRSKPLLFCPAMNTAMWEHPITAQQVDQLKAFGYVEIPCVAKK 172 (206)
T ss_dssp HHTTCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHTCCTTSCCCEEECCCHHHHTSSTHHHHHHHHHTTCCCCCC-----
T ss_pred cccccCEEEEecCCHHHHHHHHccccCCHHHHHHHHhcCCCCEEEEecCCccccCCHHHHHHHHHHHHCCCEEECCccCc
Confidence 44579999999999999987753211 11111 25799998741 236653 2334556666664 333321
Q ss_pred -----CcEEEeCCHHHHHHHhhcCCCC
Q 045940 164 -----NIVISAKNARDLLQGMEVPNLL 185 (189)
Q Consensus 164 -----~~i~~~~~~ee~~~~l~~~~~~ 185 (189)
.-.-+..+|+++++.+++....
T Consensus 173 lacg~~g~g~~~~p~~I~~~v~~~l~~ 199 (206)
T 1qzu_A 173 LVCGDEGLGAMAEVGTIVDKVKEVLFQ 199 (206)
T ss_dssp -------------CCHHHHHHCCC---
T ss_pred cccCCcCCccCCCHHHHHHHHHHHhcc
Confidence 1113567888999888765543
No 126
>2qjo_A Bifunctional NMN adenylyltransferase/nudix hydrol; two individual domains, hydrolase; HET: APR NAD; 2.60A {Synechocystis SP}
Probab=45.92 E-value=25 Score=28.58 Aligned_cols=31 Identities=6% Similarity=-0.156 Sum_probs=24.1
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHH
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQ 31 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~ 31 (189)
|++|++|+||+|+=++.+--+...+++.-+.
T Consensus 3 ~~~~~~~~i~~G~FdP~H~GH~~li~~a~~~ 33 (341)
T 2qjo_A 3 MQTKYQYGIYIGRFQPFHLGHLRTLNLALEK 33 (341)
T ss_dssp CSSSEEEEEEEECCTTCCHHHHHHHHHHHHH
T ss_pred ccceeeEEEEEEEeCCCCHHHHHHHHHHHHh
Confidence 7889999999999888777777666665543
No 127
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=45.92 E-value=63 Score=25.43 Aligned_cols=56 Identities=16% Similarity=0.178 Sum_probs=31.2
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
-++|-|-|+++ -.-+.+++.|+++|+.|+.-+...--.+.+.+...+.++.+..+.
T Consensus 4 ~k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 59 (264)
T 3tfo_A 4 DKVILITGASG--------GIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV 59 (264)
T ss_dssp TCEEEESSTTS--------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCcc--------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 35566666654 233466777778888877655542223333343444566666553
No 128
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=45.84 E-value=50 Score=26.64 Aligned_cols=142 Identities=16% Similarity=0.126 Sum_probs=68.5
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccC-CCCceEEec--CCHHHHHHHHHH--hcCeeEEecCC
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISG-QTVGDVLIV--SDMHERKAEMAR--RADAFIALPGG 110 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~-~~~~~~~~~--~~~~~R~~~m~~--~sda~I~lpGG 110 (189)
...+|+|+.. |+=.++++-|+..|.+|+++..+.. ..+... -..+..+.. .++.++-..+.. ..|++|-..|+
T Consensus 142 ~~VlV~Ga~g-~iG~~~~~~a~~~Ga~Vi~~~~~~~-~~~~~~~~Ga~~~~~~~~~~~~~~~~~~~~~~g~Dvvid~~g~ 219 (325)
T 3jyn_A 142 EIILFHAAAG-GVGSLACQWAKALGAKLIGTVSSPE-KAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGVGQ 219 (325)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHHTCEEEEEESSHH-HHHHHHHHTCSEEEETTTSCHHHHHHHHTTTCCEEEEEESSCG
T ss_pred CEEEEEcCCc-HHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHHcCCCEEEeCCCccHHHHHHHHhCCCCceEEEECCCh
Confidence 3467888544 4545666777788999998854321 111100 011223332 233333222221 35666666665
Q ss_pred cchHHHHHHHHHH----HhcCCCCCc--------------EEEEeCC--CC---chHHH---HHHHHHHHcCCCCccccC
Q 045940 111 YGTMEELLEMITW----SQLGIHDKP--------------VGVLNVD--GY---YDSLL---RFFDKGVEEGFIKSSARN 164 (189)
Q Consensus 111 ~GTL~El~~~~~~----~~~~~~~kP--------------iill~~~--g~---~~~l~---~~l~~~~~~g~i~~~~~~ 164 (189)
.++++....+.- ..+|....| +.+.... .| .+.+. +.+-.++++|-++.. ..
T Consensus 220 -~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-i~ 297 (325)
T 3jyn_A 220 -DTWLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVD-GI 297 (325)
T ss_dssp -GGHHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCC-CC
T ss_pred -HHHHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCc-cc
Confidence 555544332210 011111111 1111100 00 11222 233456778888876 45
Q ss_pred cEEEeCCHHHHHHHhhc
Q 045940 165 IVISAKNARDLLQGMEV 181 (189)
Q Consensus 165 ~i~~~~~~ee~~~~l~~ 181 (189)
..+-.++.+|+++.+++
T Consensus 298 ~~~~l~~~~~A~~~~~~ 314 (325)
T 3jyn_A 298 EQYALKDAAKAQIELSA 314 (325)
T ss_dssp EEEEGGGHHHHHHHHHT
T ss_pred cEEcHHHHHHHHHHHHc
Confidence 66778889999988865
No 129
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=45.77 E-value=96 Score=23.90 Aligned_cols=54 Identities=11% Similarity=0.164 Sum_probs=30.2
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
++|-|.|+++ -.-+++++.|+++|+.|+.-+....-.+.+.+...+.|+++..+
T Consensus 8 k~vlVTGas~--------GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 61 (252)
T 3h7a_A 8 ATVAVIGAGD--------YIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR 61 (252)
T ss_dssp CEEEEECCSS--------HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE
Confidence 4556666654 23446667777778777665554334444444444445555555
No 130
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=45.75 E-value=21 Score=28.49 Aligned_cols=28 Identities=25% Similarity=0.436 Sum_probs=16.3
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. |+=.+.++...+.|.+|+.+
T Consensus 5 vlVTGas~-GIG~aia~~la~~Ga~V~~~ 32 (247)
T 3ged_A 5 VIVTGGGH-GIGKQICLDFLEAGDKVCFI 32 (247)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEecCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 45666655 66666666666666555544
No 131
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=45.63 E-value=1.2e+02 Score=24.75 Aligned_cols=143 Identities=15% Similarity=0.114 Sum_probs=69.5
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEEec----CCHHHHHHHHH-HhcCeeEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIPKALVPIEISG-QTVGDVLIV----SDMHERKAEMA-RRADAFIALP 108 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p~~~~~~e~~~-~~~~~~~~~----~~~~~R~~~m~-~~sda~I~lp 108 (189)
...+|+|+|..|++ +.+-|+..|. +|+++-.... ..+... -..+..+.. .++.++-..+. ...|.+|-.-
T Consensus 193 ~~VlV~GaG~vG~~--a~qla~~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~ 269 (374)
T 2jhf_A 193 STCAVFGLGGVGLS--VIMGCKAAGAARIIGVDINKD-KFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVI 269 (374)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEECSCGG-GHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCeEEEEcCCHH-HHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECC
Confidence 35688987665654 4556777787 7888843211 111110 112233322 23433222211 1368888777
Q ss_pred CCcchHHHHHHHHHHH-----hcCCCC--CcEE-----------EEeCC-CCc--hHHHHHHHHHHHcCCCCccc-cCcE
Q 045940 109 GGYGTMEELLEMITWS-----QLGIHD--KPVG-----------VLNVD-GYY--DSLLRFFDKGVEEGFIKSSA-RNIV 166 (189)
Q Consensus 109 GG~GTL~El~~~~~~~-----~~~~~~--kPii-----------ll~~~-g~~--~~l~~~l~~~~~~g~i~~~~-~~~i 166 (189)
|+.-++++.+..+.-. .+|... .++- +.+.. +.| ...+..+-+++++|-++.+. ....
T Consensus 270 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~ 349 (374)
T 2jhf_A 270 GRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSVPKLVADFMAKKFALDPLITHV 349 (374)
T ss_dssp CCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCCGGGEEEE
T ss_pred CCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCCeEEEeccCCCChHHHHHHHHHHHHcCCCCchhheEEE
Confidence 7766776665554311 011111 1111 11111 111 11222233566778776532 3445
Q ss_pred EEeCCHHHHHHHhhc
Q 045940 167 ISAKNARDLLQGMEV 181 (189)
Q Consensus 167 ~~~~~~ee~~~~l~~ 181 (189)
+-.++.+|+++.+++
T Consensus 350 ~~l~~~~~A~~~~~~ 364 (374)
T 2jhf_A 350 LPFEKINEGFDLLRS 364 (374)
T ss_dssp EEGGGHHHHHHHHHT
T ss_pred EeHHHHHHHHHHHHC
Confidence 667888899888864
No 132
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=45.15 E-value=54 Score=26.16 Aligned_cols=44 Identities=16% Similarity=0.175 Sum_probs=28.6
Q ss_pred HHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 24 AALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 24 ~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
.-+.+++.||++|+.|+.-+-..---+.+++...+.|+++..+.
T Consensus 21 IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~ 64 (255)
T 4g81_D 21 LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVA 64 (255)
T ss_dssp HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECC
T ss_pred HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 34467788888999988776653333344444555677777764
No 133
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=45.13 E-value=1.2e+02 Score=24.57 Aligned_cols=142 Identities=18% Similarity=0.121 Sum_probs=66.5
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccC-CCCceEEecC--CHHHHHHHHH--HhcCeeEEecCC
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISG-QTVGDVLIVS--DMHERKAEMA--RRADAFIALPGG 110 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~-~~~~~~~~~~--~~~~R~~~m~--~~sda~I~lpGG 110 (189)
...+|+|++. |+=.++++-|+..|.+|+++..+... .+... -..+..+... ++.++-..+. ...|.+|-..|
T Consensus 168 ~~vlV~Gasg-~iG~~~~~~a~~~G~~Vi~~~~~~~~-~~~~~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g- 244 (343)
T 2eih_A 168 DDVLVMAAGS-GVSVAAIQIAKLFGARVIATAGSEDK-LRRAKALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG- 244 (343)
T ss_dssp CEEEECSTTS-TTHHHHHHHHHHTTCEEEEEESSHHH-HHHHHHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESSC-
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEEeCCHHH-HHHHHhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-
Confidence 3468999843 44446667778888899888543211 11100 0112223222 3322221121 13577777777
Q ss_pred cchHHHHHHHHHH----HhcCCCC-------------CcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHH
Q 045940 111 YGTMEELLEMITW----SQLGIHD-------------KPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNAR 173 (189)
Q Consensus 111 ~GTL~El~~~~~~----~~~~~~~-------------kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~e 173 (189)
--++++....+.- ..++... |-+-+.+........+..+-.++++|-+++.. ...+-.++.+
T Consensus 245 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~i-~~~~~l~~~~ 323 (343)
T 2eih_A 245 ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVV-GQVLPLEAAA 323 (343)
T ss_dssp SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSCCCE-EEEEEGGGHH
T ss_pred HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCCCce-eEEeeHHHHH
Confidence 4566665544320 0111111 11222222211122222233455667666432 3445677888
Q ss_pred HHHHHhhc
Q 045940 174 DLLQGMEV 181 (189)
Q Consensus 174 e~~~~l~~ 181 (189)
|+++.+++
T Consensus 324 ~A~~~~~~ 331 (343)
T 2eih_A 324 EGHRLLEE 331 (343)
T ss_dssp HHHHHHHT
T ss_pred HHHHHHHc
Confidence 88888764
No 134
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=45.04 E-value=35 Score=24.85 Aligned_cols=29 Identities=10% Similarity=0.091 Sum_probs=18.2
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
.+|+||.. ++=.++++..++.|-+|+.+.
T Consensus 6 ilVtGatG-~iG~~l~~~l~~~g~~V~~~~ 34 (206)
T 1hdo_A 6 IAIFGATG-QTGLTTLAQAVQAGYEVTVLV 34 (206)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEcCCc-HHHHHHHHHHHHCCCeEEEEE
Confidence 46666655 666666666666666666653
No 135
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=44.72 E-value=43 Score=29.34 Aligned_cols=50 Identities=14% Similarity=0.133 Sum_probs=35.9
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC-----CCchHHHHHHHH
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD-----GYYDSLLRFFDK 151 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~-----g~~~~l~~~l~~ 151 (189)
..|+|||+-| .-||+|-..++.++- ...+|||||.+.- --.|...+++..
T Consensus 168 ~~DG~VItHG-TDTMeeTA~~Lsl~l-~~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 222 (438)
T 1zq1_A 168 GDYGVVVAHG-TDTMGYTAAALSFML-RNLGKPVVLVGAQRSSDRPSSDAAMNLICS 222 (438)
T ss_dssp TCSEEEEECC-SSSHHHHHHHHHHHE-ESCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCeEEEecC-chhHHHHHHHHHHHH-hCCCCCEEEeCCCCCCCCCCcchHHHHHHH
Confidence 5799999975 899999998887653 2468999998752 134556666553
No 136
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=44.27 E-value=40 Score=26.04 Aligned_cols=42 Identities=12% Similarity=0.165 Sum_probs=26.8
Q ss_pred HHHHHHHHCCCeEEEcCCC-----------------CChhHHHHHHHHhcCCeEEEEec
Q 045940 27 DLATQLVERKINLVYGGGS-----------------VGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GGg~-----------------~GlM~a~a~ga~~~gg~viGv~p 68 (189)
+..+.|.+.|...+-=++. .|+++++.+.|...+++.+||+-
T Consensus 65 ~~~~~l~~~g~d~iviaCnTa~~~~~~l~~~~~iPvi~i~~~~~~~a~~~~~~rigvla 123 (228)
T 1jfl_A 65 WTAKRLEECGADFIIMPCNTAHAFVEDIRKAIKIPIISMIEETAKKVKELGFKKAGLLA 123 (228)
T ss_dssp HHHHHHHHHTCSEEECSCTGGGGGHHHHHHHCSSCBCCHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEEcCccHHHHHHHHHHhCCCCEechHHHHHHHHHHcCCCeEEEEe
Confidence 4566666667665444333 24667777777765777788864
No 137
>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2
Probab=44.15 E-value=17 Score=28.79 Aligned_cols=36 Identities=14% Similarity=0.003 Sum_probs=22.4
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGG 44 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg 44 (189)
|+.+++|.|.|++.. ..+.+.+.|.++|+.|+.-..
T Consensus 1 M~~~~~ilVtGatG~--------iG~~l~~~L~~~g~~V~~~~R 36 (313)
T 1qyd_A 1 MDKKSRVLIVGGTGY--------IGKRIVNASISLGHPTYVLFR 36 (313)
T ss_dssp -CCCCCEEEESTTST--------THHHHHHHHHHTTCCEEEECC
T ss_pred CCCCCEEEEEcCCcH--------HHHHHHHHHHhCCCcEEEEEC
Confidence 666788999998753 233555666667777654433
No 138
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=43.77 E-value=17 Score=30.36 Aligned_cols=31 Identities=26% Similarity=0.362 Sum_probs=21.5
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIP 68 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p 68 (189)
...+|+|+|..|++ +.+-|+..|. +|+++..
T Consensus 184 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~ 215 (370)
T 4ej6_A 184 STVAILGGGVIGLL--TVQLARLAGATTVILSTR 215 (370)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCSEEEEECS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEECC
Confidence 45688888666655 5566777787 7888744
No 139
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=43.70 E-value=38 Score=26.66 Aligned_cols=39 Identities=18% Similarity=0.254 Sum_probs=27.7
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGG 43 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GG 43 (189)
++|+|.++......+.-...++.+.+.+.+.|+.++.=.
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~ 41 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVD 41 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEe
Confidence 578998876543333334578889999999999876543
No 140
>1ovy_A 50S ribosomal protein L18; ribosome; NMR {Geobacillus stearothermophilus} SCOP: c.55.4.1
Probab=43.55 E-value=15 Score=26.48 Aligned_cols=40 Identities=23% Similarity=0.356 Sum_probs=29.4
Q ss_pred HHHHHHHHHHHHHHC----CCe-EEE--cCC-CCChhHHHHHHHHhcC
Q 045940 21 FSDAALDLATQLVER----KIN-LVY--GGG-SVGLMGLVSQTIFDGG 60 (189)
Q Consensus 21 ~~~~A~~lg~~la~~----g~~-lv~--GGg-~~GlM~a~a~ga~~~g 60 (189)
-++.|+.+|+.||++ |+. +++ ||. .-|-..|+++||.++|
T Consensus 70 n~~AA~~vG~llA~Ral~~GI~~vvfDrgg~~yhgrV~ala~~are~G 117 (120)
T 1ovy_A 70 NIEAAKKVGELVAKRALEKGIKQVVFDRGGYLYHGRVKALADAAREAG 117 (120)
T ss_dssp SHHHHHHHHHHHHHHHHHHSSSCCCCCSTTCSSCSSTHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHCCCCEEEEecCCccccHHHHHHHHHHHHhC
Confidence 478899999999884 544 222 442 2588999999999976
No 141
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=43.52 E-value=79 Score=25.83 Aligned_cols=142 Identities=13% Similarity=0.136 Sum_probs=67.8
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCe-EEEEecCccc---cccccCCCCceEEec-CCHH-HHHHHHHH----hcCeeE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCH-VLGVIPKALV---PIEISGQTVGDVLIV-SDMH-ERKAEMAR----RADAFI 105 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~-viGv~p~~~~---~~e~~~~~~~~~~~~-~~~~-~R~~~m~~----~sda~I 105 (189)
...+|+|+|..|++ +.+-|+..|.+ |+++...... .++. ........+. .+-. ..+.+... -.|+++
T Consensus 181 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l-~~~~~~~~~~~~~~~~~~~~v~~~t~g~g~Dvvi 257 (363)
T 3m6i_A 181 DPVLICGAGPIGLI--TMLCAKAAGACPLVITDIDEGRLKFAKEI-CPEVVTHKVERLSAEESAKKIVESFGGIEPAVAL 257 (363)
T ss_dssp CCEEEECCSHHHHH--HHHHHHHTTCCSEEEEESCHHHHHHHHHH-CTTCEEEECCSCCHHHHHHHHHHHTSSCCCSEEE
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEECCCHHHHHHHHHh-chhcccccccccchHHHHHHHHHHhCCCCCCEEE
Confidence 56788998666655 55667778886 8887543210 1112 1111111111 1111 12222211 257888
Q ss_pred EecCCcchHHHHHHHHHHH----hcCCCCCc------------EEEEeCCCCchHHHHHHHHHHHcCCCCccc-cCcEEE
Q 045940 106 ALPGGYGTMEELLEMITWS----QLGIHDKP------------VGVLNVDGYYDSLLRFFDKGVEEGFIKSSA-RNIVIS 168 (189)
Q Consensus 106 ~lpGG~GTL~El~~~~~~~----~~~~~~kP------------iill~~~g~~~~l~~~l~~~~~~g~i~~~~-~~~i~~ 168 (189)
=..|+..|+++.+..+... .+|....+ +-+.+...+.+.+.+.+ .++++|-++.+. ....+-
T Consensus 258 d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~-~l~~~g~i~~~~~i~~~~~ 336 (363)
T 3m6i_A 258 ECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAI-RLVENGLVDLTRLVTHRFP 336 (363)
T ss_dssp ECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSCSSCHHHHH-HHHHTTSSCCGGGEEEEEE
T ss_pred ECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCCHHHHHHHH-HHHHhCCCChHHceeeeee
Confidence 8888777777766554210 01111110 11122111222333322 345667665433 234556
Q ss_pred eCCHHHHHHHhhc
Q 045940 169 AKNARDLLQGMEV 181 (189)
Q Consensus 169 ~~~~ee~~~~l~~ 181 (189)
.++..|+++.+++
T Consensus 337 l~~~~~A~~~~~~ 349 (363)
T 3m6i_A 337 LEDALKAFETASD 349 (363)
T ss_dssp GGGHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 7888888888865
No 142
>3bbo_Q Ribosomal protein L18; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=43.34 E-value=10 Score=28.91 Aligned_cols=40 Identities=15% Similarity=0.259 Sum_probs=28.9
Q ss_pred HHHHHHHHHHHHH----CCCeE-EE--cCC-CCChhHHHHHHHHhcCC
Q 045940 22 SDAALDLATQLVE----RKINL-VY--GGG-SVGLMGLVSQTIFDGGC 61 (189)
Q Consensus 22 ~~~A~~lg~~la~----~g~~l-v~--GGg-~~GlM~a~a~ga~~~gg 61 (189)
.+.|+.+|+.||+ .|+.= |+ ||. .-|-..|++++|.|+|=
T Consensus 112 ~~AA~~VG~liAeRA~e~GI~~VvFDRgg~~YhGRVkAladaaRe~GL 159 (161)
T 3bbo_Q 112 IEVAKKVGEVIASACLEKGITKVAFDRGGYPYHGRVKALADAAREKGL 159 (161)
T ss_dssp HHHHHHHHHHSSSHHHHTSSCCCCCCCSSSCSSSTTHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEeCCCCcchHHHHHHHHHHHHhCC
Confidence 4678889988877 46552 22 542 24899999999999873
No 143
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=42.91 E-value=1.4e+02 Score=24.73 Aligned_cols=38 Identities=18% Similarity=0.235 Sum_probs=24.8
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHC-CCeE--EEcCC
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVER-KINL--VYGGG 44 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~-g~~l--v~GGg 44 (189)
++|++|+++.|.+ |++... ..|-+.|.++ ++.+ +.+|.
T Consensus 23 ~~m~ki~~v~Gtr----~~~~~~-a~li~~l~~~~~~~~~~~~tG~ 63 (396)
T 3dzc_A 23 NAMKKVLIVFGTR----PEAIKM-APLVQQLCQDNRFVAKVCVTGQ 63 (396)
T ss_dssp -CCEEEEEEECSH----HHHHHH-HHHHHHHHHCTTEEEEEEECCS
T ss_pred CCCCeEEEEEecc----HhHHHH-HHHHHHHHhCCCCcEEEEEecc
Confidence 5678999999886 355554 5688888775 5543 44443
No 144
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=42.76 E-value=23 Score=25.89 Aligned_cols=30 Identities=17% Similarity=0.142 Sum_probs=16.9
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe
Q 045940 6 RVCVFCGSNSGNRKIFSDAALDLATQLVERKIN 38 (189)
Q Consensus 6 ~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~ 38 (189)
+|.|+.+|..++.. +.|+.+++.|.+.|+.
T Consensus 2 kv~IvY~S~tGnT~---~~A~~ia~~l~~~g~~ 31 (161)
T 3hly_A 2 SVLIGYLSDYGYSD---RLSQAIGRGLVKTGVA 31 (161)
T ss_dssp CEEEEECTTSTTHH---HHHHHHHHHHHHTTCC
T ss_pred EEEEEEECCChHHH---HHHHHHHHHHHhCCCe
Confidence 45555555555433 5555666666666543
No 145
>3j21_O 50S ribosomal protein L18P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=42.55 E-value=24 Score=27.77 Aligned_cols=41 Identities=20% Similarity=0.057 Sum_probs=32.1
Q ss_pred HHHHHHHHHHHHHHC----CCe---EEEcCCCC---ChhHHHHHHHHhcCC
Q 045940 21 FSDAALDLATQLVER----KIN---LVYGGGSV---GLMGLVSQTIFDGGC 61 (189)
Q Consensus 21 ~~~~A~~lg~~la~~----g~~---lv~GGg~~---GlM~a~a~ga~~~gg 61 (189)
-++.|+.+|.+||++ |+. +=-||... |-..|+++||.++|-
T Consensus 79 N~~AA~~vG~llA~Ral~kGI~~vvfDrgg~~y~~hgRV~Ala~gAre~GL 129 (203)
T 3j21_O 79 NTPSAYLLGLLIGYKAKQAGIEEAILDIGLHPPVRGSSVFAVLKGAVDAGL 129 (203)
T ss_dssp SHHHHHHHHHHSSSSTTSSCCCCCEEECCSSCCCTTSHHHHHHHHHHHHTC
T ss_pred cHHHHHHHHHHHHHHHHhCCCCEEEEecCcceeccCcchhhhhhhcccCCe
Confidence 578999999999985 443 22366653 999999999999874
No 146
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=42.37 E-value=41 Score=28.52 Aligned_cols=43 Identities=12% Similarity=0.041 Sum_probs=27.4
Q ss_pred CCCCeEEEEEcCCCCCC-----------ChHHHHHHHHHHHHHHHCCCeE--EEcC
Q 045940 1 MGKFKRVCVFCGSNSGN-----------RKIFSDAALDLATQLVERKINL--VYGG 43 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~-----------~~~~~~~A~~lg~~la~~g~~l--v~GG 43 (189)
|+++|+|++++..-... .--....+..+++.|+++||.+ ++..
T Consensus 4 m~~~MkIl~i~~~~~P~~~~l~v~~~~~~GG~~~~~~~la~~L~~~G~~V~v~~~~ 59 (499)
T 2r60_A 4 MTRIKHVAFLNPQGNFDPADSYWTEHPDFGGQLVYVKEVSLALAEMGVQVDIITRR 59 (499)
T ss_dssp ---CCEEEEECCSSCCCTTCTTTTSBTTBSHHHHHHHHHHHHHHHTTCEEEEEEEC
T ss_pred ccccceEEEEecCCCccccccccCCCCCCCCeeehHHHHHHHHHhcCCeEEEEeCC
Confidence 56678999998754321 1224567889999999998864 4443
No 147
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=42.35 E-value=39 Score=25.39 Aligned_cols=34 Identities=12% Similarity=-0.043 Sum_probs=21.2
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKIN 38 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~ 38 (189)
++|++|.|+.+|..+ .-.+.|+.+.+.+.+.|+.
T Consensus 4 ~~mmkilii~~S~~g---~T~~la~~i~~~l~~~g~~ 37 (211)
T 1ydg_A 4 TAPVKLAIVFYSSTG---TGYAMAQEAAEAGRAAGAE 37 (211)
T ss_dssp -CCCEEEEEECCSSS---HHHHHHHHHHHHHHHTTCE
T ss_pred CCCCeEEEEEECCCC---hHHHHHHHHHHHHhcCCCE
Confidence 456677777666543 3346677777777766654
No 148
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=42.00 E-value=26 Score=27.96 Aligned_cols=29 Identities=28% Similarity=0.433 Sum_probs=25.9
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.+.++...+.|.+|+..
T Consensus 13 ~alVTGas~-GIG~aia~~la~~Ga~Vv~~ 41 (242)
T 4b79_A 13 QVLVTGGSS-GIGAAIAMQFAELGAEVVAL 41 (242)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 469999998 99999999999999998776
No 149
>1vq8_N 50S ribosomal protein L18P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: c.55.4.1 PDB: 1vq4_N* 1vq5_N* 1vq6_N* 1vq7_N* 1s72_N* 1vq9_N* 1vqk_N* 1vql_N* 1vqm_N* 1vqn_N* 1vqo_N* 1vqp_N* 1yhq_N* 1yi2_N* 1yij_N* 1yit_N* 1yj9_N* 1yjn_N* 1yjw_N* 2otj_N* ...
Probab=41.93 E-value=54 Score=25.42 Aligned_cols=41 Identities=15% Similarity=0.008 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHHHHC----CCe-EEE--cCC---CCChhHHHHHHHHhcCC
Q 045940 21 FSDAALDLATQLVER----KIN-LVY--GGG---SVGLMGLVSQTIFDGGC 61 (189)
Q Consensus 21 ~~~~A~~lg~~la~~----g~~-lv~--GGg---~~GlM~a~a~ga~~~gg 61 (189)
-++.|+.+|++||++ |+. ++. ||. ..|-..|+++||.++|=
T Consensus 78 N~~AA~~vG~llA~Ral~kGI~~vvfDrgg~~yh~GgRV~Ala~gAre~GL 128 (187)
T 1vq8_N 78 NMPSAYLTGLLAGLRAQEAGVEEAVLDIGLNSPTPGSKVFAIQEGAIDAGL 128 (187)
T ss_dssp SHHHHHHHHHHHHHHHHHTTCCBCEEECTTSCCCTTCHHHHHHHHHHHTTC
T ss_pred cHHHHHHHHHHHHHHHHHCCCCEEEEcCCCceeccchHHHHHHHHhhcCCE
Confidence 468888999999884 654 222 553 23899999999999774
No 150
>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=41.91 E-value=38 Score=27.03 Aligned_cols=35 Identities=17% Similarity=0.183 Sum_probs=24.0
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGG 43 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GG 43 (189)
|++.++|.|.|++. -.-+.+.+.|+++|+.|+.-.
T Consensus 2 M~~~~~vlVTGatG--------~iG~~l~~~L~~~G~~V~~~~ 36 (341)
T 3enk_A 2 MSTKGTILVTGGAG--------YIGSHTAVELLAHGYDVVIAD 36 (341)
T ss_dssp CCSSCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEC
T ss_pred CCCCcEEEEecCCc--------HHHHHHHHHHHHCCCcEEEEe
Confidence 56667888888775 233466777777888876543
No 151
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=41.82 E-value=24 Score=28.31 Aligned_cols=40 Identities=20% Similarity=0.123 Sum_probs=17.3
Q ss_pred HHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 27 DLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.+++.||++|..|+.-+...--.+++++...+.|+++..+
T Consensus 22 aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~ 61 (254)
T 4fn4_A 22 AIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGV 61 (254)
T ss_dssp HHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE
Confidence 3444455555555544333222233333333345555554
No 152
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=41.65 E-value=33 Score=28.26 Aligned_cols=39 Identities=23% Similarity=0.181 Sum_probs=26.5
Q ss_pred CCCeEEEEEcCCCCCC-------ChHHHHHHHHHHHHHHHCCCeEE
Q 045940 2 GKFKRVCVFCGSNSGN-------RKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~-------~~~~~~~A~~lg~~la~~g~~lv 40 (189)
++||+|++++..-... .--....+..+++.|+++||.+.
T Consensus 18 ~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V~ 63 (438)
T 3c48_A 18 GSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEVD 63 (438)
T ss_dssp -CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEEE
T ss_pred cchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEEE
Confidence 5789999999754321 11235667899999999988743
No 153
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=41.51 E-value=1.1e+02 Score=23.02 Aligned_cols=74 Identities=14% Similarity=0.068 Sum_probs=41.9
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcC-CeEEEEecCccccccccCCCCceEEecCCHH--HHHHHHHHhcCeeEEecCCcch
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGG-CHVLGVIPKALVPIEISGQTVGDVLIVSDMH--ERKAEMARRADAFIALPGGYGT 113 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~g-g~viGv~p~~~~~~e~~~~~~~~~~~~~~~~--~R~~~m~~~sda~I~lpGG~GT 113 (189)
..|||||.. |+=.++++..++.| -.|+.+.-+.....+..... .+. +..++. +--..+++..|++|...|+...
T Consensus 25 ~vlVtGatG-~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~-~~~-~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 25 NVLILGAGG-QIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN-SQI-IMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp EEEEETTTS-HHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTT-EEE-EECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred EEEEEeCCc-HHHHHHHHHHHhCCCceEEEEEcChhhhcccccCC-cEE-EEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 469999987 88888899888888 57777632211111111111 122 233332 2222345678999988877554
No 154
>1p3y_1 MRSD protein; flavoprotein, FMN, rossmann fold, HFCD family, oxdidative decarboxylation, cystein, lantibiotics, mersacidin, oxidore; HET: FAD; 2.54A {Bacillus SP} SCOP: c.34.1.1
Probab=41.46 E-value=8.3 Score=29.98 Aligned_cols=85 Identities=13% Similarity=0.101 Sum_probs=52.5
Q ss_pred HhcCeeEEecCCcchHHHHHHHHHHHh----cCCCCCcEEEEeC--CCCchHH--HHHHHHHHHcCC--CCccccCc---
Q 045940 99 RRADAFIALPGGYGTMEELLEMITWSQ----LGIHDKPVGVLNV--DGYYDSL--LRFFDKGVEEGF--IKSSARNI--- 165 (189)
Q Consensus 99 ~~sda~I~lpGG~GTL~El~~~~~~~~----~~~~~kPiill~~--~g~~~~l--~~~l~~~~~~g~--i~~~~~~~--- 165 (189)
..+|++||.|-..+|+.-+..=++-.- .-..++|+++.-. ...|..- .+.++.+.+.|+ +++.....
T Consensus 80 ~~aD~~vIaPaTanTlAKiA~GiaDnLlt~~a~a~~~pvvl~Pamn~~m~~~p~~~~Nl~~L~~~G~~iv~p~~g~~f~l 159 (194)
T 1p3y_1 80 RWADIYCIIPATANILGQTANGVAMNLVATTVLAHPHNTIFFPNMNDLMWNKTVVSRNIEQLRKDGHIVIEPVEIMAFEI 159 (194)
T ss_dssp HHCSEEEEEEECHHHHHHHHTTCCSSHHHHHHHHSSSCCEEEECCCHHHHTCHHHHHHHHHHHHHTCEECCCBCCC----
T ss_pred ccCCEEEEeCCCHHHHHHHHhhccCCHHHHHHHHcCCCEEEEECCChhhcCCHHHHHHHHHHHHCCCEEECCCCCccccc
Confidence 679999999999999987753221000 0015799998742 2366642 334556666664 44443311
Q ss_pred ------E-EEeCCHHHHHHHhhcCC
Q 045940 166 ------V-ISAKNARDLLQGMEVPN 183 (189)
Q Consensus 166 ------i-~~~~~~ee~~~~l~~~~ 183 (189)
. .-..++|++++.+.+..
T Consensus 160 acg~~g~~g~~~~~~~iv~~v~~~l 184 (194)
T 1p3y_1 160 ATGTRKPNRGLITPDKALLAIEKGF 184 (194)
T ss_dssp --------CBCCCHHHHHHHHHHHC
T ss_pred ccCCcCcCCCCCCHHHHHHHHHHHh
Confidence 2 35579999999887643
No 155
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=41.35 E-value=31 Score=22.51 Aligned_cols=26 Identities=12% Similarity=0.084 Sum_probs=19.4
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKIN 38 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~ 38 (189)
+.|-|||.+. .++....+.|.+.||.
T Consensus 54 ~~ivvyC~~g--------~rs~~a~~~L~~~G~~ 79 (94)
T 1wv9_A 54 RPLLLVCEKG--------LLSQVAALYLEAEGYE 79 (94)
T ss_dssp SCEEEECSSS--------HHHHHHHHHHHHHTCC
T ss_pred CCEEEEcCCC--------ChHHHHHHHHHHcCCc
Confidence 7789999874 2456677778888887
No 156
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=41.30 E-value=79 Score=26.90 Aligned_cols=63 Identities=19% Similarity=0.145 Sum_probs=45.7
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE------------------------------------------
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINL------------------------------------------ 39 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~l------------------------------------------ 39 (189)
.+.++|+|++=.+ ++...+.+++|.++|.++|+.+
T Consensus 36 ~~~k~I~iv~K~~---~~~~~~~~~~l~~~L~~~~~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dlv 112 (365)
T 3pfn_A 36 KSPKSVLVIKKMR---DASLLQPFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFI 112 (365)
T ss_dssp SCCCEEEEEECTT---CGGGHHHHHHHHHHHHHTSCEEEEEHHHHHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEE
T ss_pred CCCCEEEEEecCC---CHHHHHHHHHHHHHHHHCCCEEEEehHHhhhhccccccccccccccccccccChhhcccCCCEE
Confidence 3568999998654 5677888888888888776543
Q ss_pred EEcCCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 40 VYGGGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 40 v~GGg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
|+=||. |.|=-+++-....+-.++||-.
T Consensus 113 I~lGGD-GT~L~aa~~~~~~~~PvlGiN~ 140 (365)
T 3pfn_A 113 ICLGGD-GTLLYASSLFQGSVPPVMAFHL 140 (365)
T ss_dssp EEESST-THHHHHHHHCSSSCCCEEEEES
T ss_pred EEEcCh-HHHHHHHHHhccCCCCEEEEcC
Confidence 344566 8887777766666678999943
No 157
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=41.22 E-value=90 Score=24.57 Aligned_cols=57 Identities=14% Similarity=0.049 Sum_probs=34.0
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE--EcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLV--YGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv--~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
++.+.|.|+-+.+. +.|..+++.|.+.|+.++ +-=.+ +-++++.+-..+....+||.
T Consensus 11 ~~~~vi~Vir~~~~-------~~a~~~a~al~~gGi~~iEvt~~t~-~a~~~I~~l~~~~p~~~IGA 69 (217)
T 3lab_A 11 NTKPLIPVIVIDDL-------VHAIPMAKALVAGGVHLLEVTLRTE-AGLAAISAIKKAVPEAIVGA 69 (217)
T ss_dssp TSCSEEEEECCSCG-------GGHHHHHHHHHHTTCCEEEEETTST-THHHHHHHHHHHCTTSEEEE
T ss_pred hhCCEEEEEEcCCH-------HHHHHHHHHHHHcCCCEEEEeCCCc-cHHHHHHHHHHHCCCCeEee
Confidence 45577888866542 456677777777777644 33333 55555555444445566666
No 158
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=41.21 E-value=24 Score=26.11 Aligned_cols=33 Identities=15% Similarity=0.119 Sum_probs=20.8
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINL 39 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~l 39 (189)
|++|.|+.+|..+ .-.+.|+.+.+.+.+.|+.+
T Consensus 5 M~kilii~~S~~g---~T~~la~~i~~~l~~~g~~v 37 (200)
T 2a5l_A 5 SPYILVLYYSRHG---ATAEMARQIARGVEQGGFEA 37 (200)
T ss_dssp CCEEEEEECCSSS---HHHHHHHHHHHHHHHTTCEE
T ss_pred cceEEEEEeCCCC---hHHHHHHHHHHHHhhCCCEE
Confidence 4566666666543 34567777777777777654
No 159
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=40.97 E-value=22 Score=28.87 Aligned_cols=37 Identities=16% Similarity=0.135 Sum_probs=24.3
Q ss_pred hcCeeEEecCCc-chHHHHHHHHHHHhcCCCCCcEEEEeCCCC
Q 045940 100 RADAFIALPGGY-GTMEELLEMITWSQLGIHDKPVGVLNVDGY 141 (189)
Q Consensus 100 ~sda~I~lpGG~-GTL~El~~~~~~~~~~~~~kPiill~~~g~ 141 (189)
.+|++|||+||. ..+++..+.+. - ...|+++-+..|.
T Consensus 36 ~~D~IVVLG~~~~~Rl~~A~~L~~---~--g~~~lIvSGG~g~ 73 (266)
T 3ca8_A 36 QADCVILAGNAVMPTIDAACKIAR---D--QQIPLLISGGIGH 73 (266)
T ss_dssp CCSEEEEESCCCHHHHHHHHHHHH---H--HTCCEEEECCSST
T ss_pred CCCEEEECCCCchHHHHHHHHHHH---c--CCCcEEEECCCCC
Confidence 689999999986 56666655553 2 2347776665444
No 160
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=40.90 E-value=45 Score=25.46 Aligned_cols=56 Identities=16% Similarity=0.169 Sum_probs=41.2
Q ss_pred eEEEEEcCCCCCCChHH----------------HHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 5 KRVCVFCGSNSGNRKIF----------------SDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~----------------~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.+|+|+|..+...+-.. .+.+++.-+.+.+.|+.+|-||+. +++-|.+.|-..+=+
T Consensus 95 ~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~------~~~~A~~~Gl~~vli 166 (196)
T 2q5c_A 95 NELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKT------VTDEAIKQGLYGETI 166 (196)
T ss_dssp SEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHH------HHHHHHHTTCEEEEC
T ss_pred CcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHH------HHHHHHHcCCcEEEE
Confidence 47888888776654332 245677888889999999999865 578888888775544
No 161
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=40.77 E-value=10 Score=30.33 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=27.1
Q ss_pred CCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 045940 3 KFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYG 42 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~G 42 (189)
..++|+|.+|......+.-...++.+.+.|.++||.++.=
T Consensus 2 ~~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i 41 (307)
T 3r5x_A 2 NAMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPI 41 (307)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEE
T ss_pred CCcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEE
Confidence 3467777766543323444677888888888899987753
No 162
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=40.28 E-value=1.2e+02 Score=24.87 Aligned_cols=143 Identities=17% Similarity=0.126 Sum_probs=68.4
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEEec----CCHHHHHHHHH-HhcCeeEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIPKALVPIEISG-QTVGDVLIV----SDMHERKAEMA-RRADAFIALP 108 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p~~~~~~e~~~-~~~~~~~~~----~~~~~R~~~m~-~~sda~I~lp 108 (189)
...+|+|+|..|++ +.+-|+..|. +|+++-.... ..+... -..+..+.. .++.++-..+. ...|.+|-..
T Consensus 192 ~~VlV~GaG~vG~~--avqla~~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~D~vid~~ 268 (373)
T 2fzw_A 192 SVCAVFGLGGVGLA--VIMGCKVAGASRIIGVDINKD-KFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECI 268 (373)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHHTCSEEEEECSCGG-GHHHHHHHTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCeEEEEcCCHH-HHHHHHHcCCceEeccccccccHHHHHHHHhCCCCCEEEECC
Confidence 34688987665654 4555667787 7888843221 111110 011233322 23433222221 1368888777
Q ss_pred CCcchHHHHHHHHHHH-----hcCCCC--CcEE-----------EEeCC-CCc--hHHHHHHHHHHHcCCCCccc-cCcE
Q 045940 109 GGYGTMEELLEMITWS-----QLGIHD--KPVG-----------VLNVD-GYY--DSLLRFFDKGVEEGFIKSSA-RNIV 166 (189)
Q Consensus 109 GG~GTL~El~~~~~~~-----~~~~~~--kPii-----------ll~~~-g~~--~~l~~~l~~~~~~g~i~~~~-~~~i 166 (189)
|+.-++++....+.-. .+|... .++- +.+.. +.| ...+..+-.++++|.++.+. ....
T Consensus 269 g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~ 348 (373)
T 2fzw_A 269 GNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSEYMSKKIKVDEFVTHN 348 (373)
T ss_dssp CCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCSGGGEEEE
T ss_pred CcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCCEEEEeccCCCCcHHHHHHHHHHHHcCCCCchheEeEE
Confidence 7766766665544211 011111 1111 11111 111 11222233566778776532 2445
Q ss_pred EEeCCHHHHHHHhhc
Q 045940 167 ISAKNARDLLQGMEV 181 (189)
Q Consensus 167 ~~~~~~ee~~~~l~~ 181 (189)
+-.++.+|+++.+++
T Consensus 349 ~~l~~~~~A~~~~~~ 363 (373)
T 2fzw_A 349 LSFDEINKAFELMHS 363 (373)
T ss_dssp EEGGGHHHHHHHHHH
T ss_pred eeHHHHHHHHHHHhC
Confidence 567888888888764
No 163
>1h4x_A SPOIIAA, anti-sigma F factor antagonist; cell differentiation, crystallography, phosphorylation, sigma factor, sporulation; HET: SEP; 1.16A {Bacillus sphaericus} SCOP: c.13.2.1 PDB: 1h4z_A 1h4y_A
Probab=40.19 E-value=33 Score=23.13 Aligned_cols=59 Identities=10% Similarity=0.110 Sum_probs=35.0
Q ss_pred CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhhcCCC
Q 045940 109 GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGMEVPNL 184 (189)
Q Consensus 109 GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~~~~ 184 (189)
-|++.|.++...+. ..+.++.+.+.. ..+...++. .|+ .+.+ +.+|.+++++.+.+|.+
T Consensus 58 sgl~~L~~~~~~~~-----~~g~~l~l~~~~---~~v~~~l~~---~gl-----~~~~-i~~~~~~Al~~~~~~~~ 116 (117)
T 1h4x_A 58 SGVGLVLGRMRELE-----AVAGRTILLNPS---PTMRKVFQF---SGL-----GPWM-MDATEEEAIDRVRGIVN 116 (117)
T ss_dssp HHHHHHHHHHHHHH-----TTTCEEEEESCC---HHHHHHHHH---TTC-----GGGE-ECSCHHHHHHHTC----
T ss_pred HHHHHHHHHHHHHH-----HcCCEEEEEeCC---HHHHHHHHH---hCC-----ceEE-EeCCHHHHHHHHHHhhc
Confidence 45666666654442 467888888754 344444432 222 2345 89999999999887653
No 164
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=39.72 E-value=69 Score=25.94 Aligned_cols=67 Identities=18% Similarity=0.245 Sum_probs=39.8
Q ss_pred HHHHHhcCeeEEec--CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCH
Q 045940 95 AEMARRADAFIALP--GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNA 172 (189)
Q Consensus 95 ~~m~~~sda~I~lp--GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ 172 (189)
..+...||++|.-. .|+|+- +.|+++ .++|+|..+..|+-+ ++.......+.-.+|+
T Consensus 279 ~~~~~~adv~v~ps~~e~~~~~--~~EAma------~G~PvI~~~~~~~~e-------------~v~~~~~g~~~~~~d~ 337 (394)
T 2jjm_A 279 AELLAMSDLMLLLSEKESFGLV--LLEAMA------CGVPCIGTRVGGIPE-------------VIQHGDTGYLCEVGDT 337 (394)
T ss_dssp HHHHHTCSEEEECCSCCSCCHH--HHHHHH------TTCCEEEECCTTSTT-------------TCCBTTTEEEECTTCH
T ss_pred HHHHHhCCEEEeccccCCCchH--HHHHHh------cCCCEEEecCCChHH-------------HhhcCCceEEeCCCCH
Confidence 34567899888543 355554 567774 799999988764321 1111111222223488
Q ss_pred HHHHHHhhcC
Q 045940 173 RDLLQGMEVP 182 (189)
Q Consensus 173 ee~~~~l~~~ 182 (189)
+++.+.|.+.
T Consensus 338 ~~la~~i~~l 347 (394)
T 2jjm_A 338 TGVADQAIQL 347 (394)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8888887654
No 165
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=39.70 E-value=96 Score=23.30 Aligned_cols=34 Identities=21% Similarity=0.206 Sum_probs=21.1
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
+++|-|-|+++ -..+++++.|+++|+.|+..+..
T Consensus 2 ~k~vlITGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 35 (235)
T 3l77_A 2 MKVAVITGASR--------GIGEAIARALARDGYALALGARS 35 (235)
T ss_dssp CCEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 45666667664 23446666777778776655544
No 166
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=39.52 E-value=66 Score=26.20 Aligned_cols=32 Identities=22% Similarity=0.290 Sum_probs=22.8
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
...+|+||.. |+=-++.+-|+..|.+|+++..
T Consensus 152 ~~VlV~gg~G-~vG~~a~qla~~~Ga~Vi~~~~ 183 (346)
T 3fbg_A 152 KTLLIINGAG-GVGSIATQIAKAYGLRVITTAS 183 (346)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEECC
T ss_pred CEEEEEcCCC-HHHHHHHHHHHHcCCEEEEEeC
Confidence 3458886654 5555667778888999999854
No 167
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=39.50 E-value=1.6e+02 Score=24.16 Aligned_cols=139 Identities=15% Similarity=0.087 Sum_probs=67.7
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCcccccccc--CCCCceEEecCCHHHHHHHHHHhcCeeEEecCCcch
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEIS--GQTVGDVLIVSDMHERKAEMARRADAFIALPGGYGT 113 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~--~~~~~~~~~~~~~~~R~~~m~~~sda~I~lpGG~GT 113 (189)
...+|+|+|..|+ ++.+-|+..|.+|+++...... .+.. .-..+..+...+-. .-..+....|++|-.-|+.-+
T Consensus 189 ~~VlV~GaG~vG~--~~~q~a~~~Ga~Vi~~~~~~~~-~~~~~~~lGa~~v~~~~~~~-~~~~~~~~~D~vid~~g~~~~ 264 (366)
T 1yqd_A 189 KHIGIVGLGGLGH--VAVKFAKAFGSKVTVISTSPSK-KEEALKNFGADSFLVSRDQE-QMQAAAGTLDGIIDTVSAVHP 264 (366)
T ss_dssp CEEEEECCSHHHH--HHHHHHHHTTCEEEEEESCGGG-HHHHHHTSCCSEEEETTCHH-HHHHTTTCEEEEEECCSSCCC
T ss_pred CEEEEECCCHHHH--HHHHHHHHCCCEEEEEeCCHHH-HHHHHHhcCCceEEeccCHH-HHHHhhCCCCEEEECCCcHHH
Confidence 3458888765555 4556677778898888543211 1111 11122333333321 111112346888877777666
Q ss_pred HHHHHHHHHH----HhcCCCCCc------------EEEEeCCCC-chHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHH
Q 045940 114 MEELLEMITW----SQLGIHDKP------------VGVLNVDGY-YDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLL 176 (189)
Q Consensus 114 L~El~~~~~~----~~~~~~~kP------------iill~~~g~-~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~ 176 (189)
+++.+..+.. ..++....| +-+.....+ .+.+.+.+ .++++|-+++.. ..+-.++.+|++
T Consensus 265 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~-~l~~~g~l~~~~--~~~~l~~~~~A~ 341 (366)
T 1yqd_A 265 LLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMI-DFAAKHNITADI--EVISTDYLNTAM 341 (366)
T ss_dssp SHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHH-HHHHHTTCCCCE--EEECGGGHHHHH
T ss_pred HHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHH-HHHHcCCCCCce--EEEcHHHHHHHH
Confidence 6666544310 011211112 222222111 12333333 345567776543 345567888888
Q ss_pred HHhhc
Q 045940 177 QGMEV 181 (189)
Q Consensus 177 ~~l~~ 181 (189)
+.+++
T Consensus 342 ~~~~~ 346 (366)
T 1yqd_A 342 ERLAK 346 (366)
T ss_dssp HHHHT
T ss_pred HHHHc
Confidence 88764
No 168
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=39.38 E-value=30 Score=28.06 Aligned_cols=30 Identities=23% Similarity=0.329 Sum_probs=23.2
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+..
T Consensus 30 KvalVTGas~-GIG~aiA~~la~~Ga~V~i~ 59 (273)
T 4fgs_A 30 KIAVITGATS-GIGLAAAKRFVAEGARVFIT 59 (273)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCcCC-HHHHHHHHHHHHCCCEEEEE
Confidence 3568888887 88888888888888877655
No 169
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=39.32 E-value=37 Score=27.21 Aligned_cols=51 Identities=12% Similarity=0.126 Sum_probs=31.7
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCC-CCCcEEEEeC--CCCc-----hHHHHHHHHHHHc
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGI-HDKPVGVLNV--DGYY-----DSLLRFFDKGVEE 155 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~-~~kPiill~~--~g~~-----~~l~~~l~~~~~~ 155 (189)
..|.+ +.-||=||+.+.+..+. +. .++|++-+|. .||. +.+.+.++.+.+.
T Consensus 35 ~~D~v-v~lGGDGT~l~aa~~~~----~~~~~~PilGIn~G~lgfl~~~~~~~~~~~l~~l~~g 93 (272)
T 2i2c_A 35 EPEIV-ISIGGDGTFLSAFHQYE----ERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAKG 93 (272)
T ss_dssp SCSEE-EEEESHHHHHHHHHHTG----GGTTTCEEEEEESSSCCSSCCBCGGGHHHHHHHHHTT
T ss_pred CCCEE-EEEcCcHHHHHHHHHHh----hcCCCCCEEEEeCCCCCcCCcCCHHHHHHHHHHHHcC
Confidence 34554 45578999988876652 11 2689776665 4676 4555666665543
No 170
>4e12_A Diketoreductase; oxidoreductase, NADH; HET: 1PE; 1.93A {Acinetobacter baylyi} PDB: 4dyd_A* 4e13_A*
Probab=39.26 E-value=44 Score=26.63 Aligned_cols=32 Identities=16% Similarity=0.059 Sum_probs=24.1
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|.++++|+|+|... ....+++.++++|+.|+-
T Consensus 1 Mm~~~kV~VIGaG~---------mG~~iA~~la~~G~~V~l 32 (283)
T 4e12_A 1 MTGITNVTVLGTGV---------LGSQIAFQTAFHGFAVTA 32 (283)
T ss_dssp CCSCCEEEEECCSH---------HHHHHHHHHHHTTCEEEE
T ss_pred CCCCCEEEEECCCH---------HHHHHHHHHHhCCCeEEE
Confidence 55688999998753 445677888889998654
No 171
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=39.20 E-value=19 Score=25.30 Aligned_cols=55 Identities=13% Similarity=0.213 Sum_probs=34.7
Q ss_pred hcCCCCCcEEEEeCCCCchHHHHHHHH-HHHcCCCCccccCcEEEeCCHHHHHHHhhc
Q 045940 125 QLGIHDKPVGVLNVDGYYDSLLRFFDK-GVEEGFIKSSARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 125 ~~~~~~kPiill~~~g~~~~l~~~l~~-~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~ 181 (189)
.++.+-+|++.++.+|.-+.+++.++. +-....|+-+.... ..+|.+++.+.|++
T Consensus 12 ~~ah~Lkpvv~IGK~GlTe~vi~ei~~aL~~hELIKVkvl~~--~~~d~~e~a~~la~ 67 (104)
T 1rq8_A 12 SLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQN--NFDDKKELAETLSE 67 (104)
T ss_dssp HHTTSSCCSCEECSSSCCHHHHHHHHHHHHHSSEEEEEECCC--CHHHHHHHHHHHHH
T ss_pred HHhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCcEEEEEeCC--CHHHHHHHHHHHHH
Confidence 344456899999999999999998874 54444444222110 13455666766654
No 172
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=38.82 E-value=99 Score=24.76 Aligned_cols=32 Identities=16% Similarity=0.151 Sum_probs=24.3
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
...+|+||.. |+=.++++-++..|.+|+++..
T Consensus 142 ~~vlV~Ga~g-giG~~~~~~a~~~G~~V~~~~~ 173 (327)
T 1qor_A 142 EQFLFHAAAG-GVGLIACQWAKALGAKLIGTVG 173 (327)
T ss_dssp CEEEESSTTB-HHHHHHHHHHHHHTCEEEEEES
T ss_pred CEEEEECCCC-HHHHHHHHHHHHcCCEEEEEeC
Confidence 4468899755 6666778888888999988854
No 173
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=38.39 E-value=92 Score=24.04 Aligned_cols=30 Identities=17% Similarity=0.314 Sum_probs=20.3
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||.. |+=.++++...+.|.+|+.+
T Consensus 30 k~vlITGas~-gIG~~la~~l~~~G~~V~~~ 59 (262)
T 3rkr_A 30 QVAVVTGASR-GIGAAIARKLGSLGARVVLT 59 (262)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 3457777766 77777777777777666655
No 174
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=38.35 E-value=21 Score=29.83 Aligned_cols=40 Identities=18% Similarity=0.394 Sum_probs=27.1
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|+|++ |+|++|......+.=...|+.+.+.|-+.||.++.
T Consensus 1 m~~~~-v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~ 40 (364)
T 3i12_A 1 MAKLR-VGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVL 40 (364)
T ss_dssp -CCEE-EEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCccE-EEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEE
Confidence 66654 55554444444566678999999999888998764
No 175
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=37.77 E-value=30 Score=27.67 Aligned_cols=39 Identities=10% Similarity=-0.003 Sum_probs=18.6
Q ss_pred HHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 27 DLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.+++.||++|..++.-+.. ---.+..+...+.++++..+
T Consensus 22 aia~~la~~Ga~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~ 60 (258)
T 4gkb_A 22 AISMRLAEERAIPVVFARH-APDGAFLDALAQRQPRATYL 60 (258)
T ss_dssp HHHHHHHHTTCEEEEEESS-CCCHHHHHHHHHHCTTCEEE
T ss_pred HHHHHHHHcCCEEEEEECC-cccHHHHHHHHhcCCCEEEE
Confidence 4455556666655544433 11123333344455555555
No 176
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=37.74 E-value=47 Score=25.77 Aligned_cols=31 Identities=13% Similarity=0.067 Sum_probs=17.3
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGG 43 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GG 43 (189)
++|.|.|+++ -.-+.+.+.|+++|+.|+.-+
T Consensus 8 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~ 38 (267)
T 2gdz_A 8 KVALVTGAAQ--------GIGRAFAEALLLKGAKVALVD 38 (267)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC--------cHHHHHHHHHHHCCCEEEEEE
Confidence 4566666654 233355666666777665443
No 177
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=37.66 E-value=29 Score=30.26 Aligned_cols=29 Identities=34% Similarity=0.205 Sum_probs=26.0
Q ss_pred CeEEEcCCCCChhHHHHHHHHh-cCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFD-GGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~-~gg~viGv 66 (189)
..|||||+. |+=.|+++...+ .|.+|+.+
T Consensus 63 vaLVTGASs-GIG~AiA~~LA~~~GA~Vv~~ 92 (422)
T 3s8m_A 63 KVLVIGASS-GYGLASRITAAFGFGADTLGV 92 (422)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHHHCCEEEEE
T ss_pred EEEEECCCh-HHHHHHHHHHHHhCCCEEEEE
Confidence 359999998 999999999988 89999887
No 178
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=37.53 E-value=46 Score=27.09 Aligned_cols=38 Identities=8% Similarity=0.014 Sum_probs=26.0
Q ss_pred CCeEEEEEcCCCCC-CChHHHHHHHHHHHHHHHCCCeEE
Q 045940 3 KFKRVCVFCGSNSG-NRKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 3 ~~~~I~V~g~s~~~-~~~~~~~~A~~lg~~la~~g~~lv 40 (189)
|.|+|++++..-.. ..--....+..+++.|+++||.|.
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V~ 39 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEVL 39 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeEE
Confidence 45778888866433 122345668899999999988743
No 179
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=37.45 E-value=99 Score=21.23 Aligned_cols=30 Identities=23% Similarity=0.230 Sum_probs=18.1
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
.+.+|+|+|..| .++++...+.|-.|+++-
T Consensus 7 ~~v~I~G~G~iG--~~la~~L~~~g~~V~~id 36 (141)
T 3llv_A 7 YEYIVIGSEAAG--VGLVRELTAAGKKVLAVD 36 (141)
T ss_dssp CSEEEECCSHHH--HHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCHHH--HHHHHHHHHCCCeEEEEE
Confidence 456777765433 345565566677777763
No 180
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=37.31 E-value=1.1e+02 Score=21.90 Aligned_cols=36 Identities=17% Similarity=0.231 Sum_probs=25.8
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
|+. ++|.|.|++. -..+.+.+.|.++|+.|+.-...
T Consensus 1 M~~-~~ilVtGatG--------~iG~~l~~~l~~~g~~V~~~~r~ 36 (206)
T 1hdo_A 1 MAV-KKIAIFGATG--------QTGLTTLAQAVQAGYEVTVLVRD 36 (206)
T ss_dssp CCC-CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CCC-CEEEEEcCCc--------HHHHHHHHHHHHCCCeEEEEEeC
Confidence 544 6899999875 34567778888889987765443
No 181
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=37.24 E-value=36 Score=24.68 Aligned_cols=67 Identities=16% Similarity=0.171 Sum_probs=40.3
Q ss_pred HHHHHhcCeeEEec--CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCH
Q 045940 95 AEMARRADAFIALP--GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNA 172 (189)
Q Consensus 95 ~~m~~~sda~I~lp--GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ 172 (189)
..+...||++|... .|+|+- ++|++. .++|+|..+.. .+.+++ ......+.-.+|+
T Consensus 110 ~~~~~~ad~~l~ps~~e~~~~~--~~Ea~a------~G~PvI~~~~~----~~~e~~----------~~~~g~~~~~~~~ 167 (200)
T 2bfw_A 110 RELYGSVDFVIIPSYFEPFGLV--ALEAMC------LGAIPIASAVG----GLRDII----------TNETGILVKAGDP 167 (200)
T ss_dssp HHHHTTCSEEEECCSCCSSCHH--HHHHHH------TTCEEEEESCH----HHHHHC----------CTTTCEEECTTCH
T ss_pred HHHHHHCCEEEECCCCCCccHH--HHHHHH------CCCCEEEeCCC----ChHHHc----------CCCceEEecCCCH
Confidence 45668899988744 344544 677774 79999988643 222211 1122233334589
Q ss_pred HHHHHHhhcCC
Q 045940 173 RDLLQGMEVPN 183 (189)
Q Consensus 173 ee~~~~l~~~~ 183 (189)
+++.+.|.+..
T Consensus 168 ~~l~~~i~~l~ 178 (200)
T 2bfw_A 168 GELANAILKAL 178 (200)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99988887643
No 182
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=37.07 E-value=34 Score=25.99 Aligned_cols=28 Identities=18% Similarity=0.122 Sum_probs=18.2
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 4 vlVTGas~-gIG~~~a~~l~~~G~~V~~~ 31 (230)
T 3guy_A 4 IVITGASS-GLGAELAKLYDAEGKATYLT 31 (230)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCCEEEE
T ss_pred EEEecCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 46667666 66666666666666666555
No 183
>2qjt_B Nicotinamide-nucleotide adenylyltransferase; two individual domains, hydrolase; HET: AMP; 2.30A {Francisella tularensis} PDB: 2r5w_B
Probab=36.71 E-value=33 Score=28.04 Aligned_cols=31 Identities=16% Similarity=0.088 Sum_probs=21.4
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHH
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQ 31 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~ 31 (189)
|++|++|+||||+=+..+.-+...+++..+.
T Consensus 3 m~~~~~~~i~~GtFdP~h~GHl~~~~~a~~~ 33 (352)
T 2qjt_B 3 MDPMYDISVFIGRFQPFHKGHLHNIIIALQN 33 (352)
T ss_dssp ---CEEEEEEEECCTTCCHHHHHHHHHHHHS
T ss_pred ccccccEEEEEEecCCCChHHHHHHHHHHHh
Confidence 6667899999999887777777766665554
No 184
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=36.65 E-value=22 Score=29.28 Aligned_cols=32 Identities=25% Similarity=0.424 Sum_probs=23.1
Q ss_pred eEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 104 FIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 104 ~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
+|+.-||=||+.|+...+.. ...+.|+.+++.
T Consensus 83 ~vvv~GGDGTv~~v~~~l~~---~~~~~pl~iIP~ 114 (337)
T 2qv7_A 83 VLIAAGGDGTLNEVVNGIAE---KPNRPKLGVIPM 114 (337)
T ss_dssp EEEEEECHHHHHHHHHHHTT---CSSCCEEEEEEC
T ss_pred EEEEEcCchHHHHHHHHHHh---CCCCCcEEEecC
Confidence 45566899999999888721 125679998864
No 185
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=36.55 E-value=45 Score=24.90 Aligned_cols=36 Identities=11% Similarity=0.221 Sum_probs=25.0
Q ss_pred CCCe-EEEEEcCCCCCCChHHHHHHHHHHHHHH-HCCCeEEEcCCC
Q 045940 2 GKFK-RVCVFCGSNSGNRKIFSDAALDLATQLV-ERKINLVYGGGS 45 (189)
Q Consensus 2 ~~~~-~I~V~g~s~~~~~~~~~~~A~~lg~~la-~~g~~lv~GGg~ 45 (189)
+.|+ +|.|.|++. ..-+.+.+.|+ ++|+.|+.-...
T Consensus 2 ~~mmk~vlVtGasg--------~iG~~~~~~l~~~~g~~V~~~~r~ 39 (221)
T 3r6d_A 2 NAMYXYITILGAAG--------QIAQXLTATLLTYTDMHITLYGRQ 39 (221)
T ss_dssp CCSCSEEEEESTTS--------HHHHHHHHHHHHHCCCEEEEEESS
T ss_pred CceEEEEEEEeCCc--------HHHHHHHHHHHhcCCceEEEEecC
Confidence 3444 599999875 34557777788 799988765544
No 186
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=36.47 E-value=37 Score=26.11 Aligned_cols=28 Identities=29% Similarity=0.395 Sum_probs=16.0
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 6 vlVTGas~-GIG~a~a~~l~~~G~~V~~~ 33 (235)
T 3l6e_A 6 IIVTGAGS-GLGRALTIGLVERGHQVSMM 33 (235)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 45666655 66666666555555555544
No 187
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=36.29 E-value=37 Score=26.43 Aligned_cols=31 Identities=16% Similarity=0.159 Sum_probs=26.9
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||+. |+=.++++...+.|.+|+.+-
T Consensus 8 k~vlVTGas~-GIG~aia~~l~~~G~~V~~~~ 38 (252)
T 3h7a_A 8 ATVAVIGAGD-YIGAEIAKKFAAEGFTVFAGR 38 (252)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEEe
Confidence 3579999998 999999999999999988773
No 188
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=36.27 E-value=67 Score=27.54 Aligned_cols=62 Identities=19% Similarity=0.185 Sum_probs=42.7
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHC--CCeE----------------------------------------
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVER--KINL---------------------------------------- 39 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~--g~~l---------------------------------------- 39 (189)
++|++|+|++-.. ++...+.++++.++|.++ |+.+
T Consensus 39 ~~~k~V~II~n~~---~~~~~~~~~~l~~~L~~~~~gi~V~ve~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (388)
T 3afo_A 39 NPLQNVYITKKPW---TPSTREAMVEFITHLHESYPEVNVIVQPDVAEEISQDFKSPLENDPNRPHILYTGPEQDIVNRT 115 (388)
T ss_dssp SCCCEEEEEECTT---CHHHHHHHHHHHHHHHHHCTTCEEECCHHHHHHHHTTCCSCGGGCTTSCEEEEECCHHHHHHHC
T ss_pred CCCcEEEEEEeCC---CHHHHHHHHHHHHHHHHhCCCeEEEEeCchhhhhhhhccccccccccccccccccchhhcccCC
Confidence 3578999998754 566777777877777665 4332
Q ss_pred ---EEcCCCCChhHHHHHHHHhcCC-eEEEEe
Q 045940 40 ---VYGGGSVGLMGLVSQTIFDGGC-HVLGVI 67 (189)
Q Consensus 40 ---v~GGg~~GlM~a~a~ga~~~gg-~viGv~ 67 (189)
|+=||. |.|-.+++.....+- .++||-
T Consensus 116 DlVIvlGGD-GTlL~aa~~~~~~~vpPiLGIN 146 (388)
T 3afo_A 116 DLLVTLGGD-GTILHGVSMFGNTQVPPVLAFA 146 (388)
T ss_dssp SEEEEEESH-HHHHHHHHTTTTSCCCCEEEEE
T ss_pred CEEEEEeCc-HHHHHHHHHhcccCCCeEEEEE
Confidence 223356 888888887766666 689993
No 189
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=36.21 E-value=23 Score=24.96 Aligned_cols=31 Identities=23% Similarity=0.371 Sum_probs=18.6
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE
Q 045940 6 RVCVFCGSNSGNRKIFSDAALDLATQLVERKINL 39 (189)
Q Consensus 6 ~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~l 39 (189)
+|.|+.+|..++ -.+.|+++.+.+.+.|+.+
T Consensus 2 ki~iiy~S~~Gn---t~~~a~~i~~~l~~~g~~v 32 (147)
T 1f4p_A 2 KALIVYGSTTGN---TEYTAETIARELADAGYEV 32 (147)
T ss_dssp EEEEEEECSSSH---HHHHHHHHHHHHHHHTCEE
T ss_pred eEEEEEECCcCH---HHHHHHHHHHHHHhcCCee
Confidence 455555555553 3466677777776666654
No 190
>3llo_A Prestin; STAS domain, cell shape, glycoprotein, membrane, motor prote transmembrane; HET: BOG; 1.57A {Rattus norvegicus}
Probab=36.05 E-value=74 Score=22.26 Aligned_cols=61 Identities=13% Similarity=0.117 Sum_probs=38.2
Q ss_pred CcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhhcC
Q 045940 110 GYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGMEVP 182 (189)
Q Consensus 110 G~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~~ 182 (189)
|++.|.++...+. ..+..+.|.+.. .++.+.|+ ..|+.+.-. ....+..|.+++++.++..
T Consensus 81 gl~~L~~~~~~~~-----~~g~~l~l~~~~---~~v~~~l~---~~gl~~~~~-~~~~if~s~~~Al~~~~~~ 141 (143)
T 3llo_A 81 GVKTLAGIVKEYG-----DVGIYVYLAGCS---AQVVNDLT---SNRFFENPA-LKELLFHSIHDAVLGSQVR 141 (143)
T ss_dssp HHHHHHHHHHHHH-----TTTCEEEEESCC---HHHHHHHH---HTTTTSSGG-GGGGEESSHHHHHHHTSSC
T ss_pred HHHHHHHHHHHHH-----HCCCEEEEEeCC---HHHHHHHH---hCCCeeccC-ccceEECcHHHHHHHHHhc
Confidence 5677777765553 567899998765 34444443 345543110 1235789999999988764
No 191
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=36.04 E-value=24 Score=28.95 Aligned_cols=40 Identities=23% Similarity=0.473 Sum_probs=25.0
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|+|++ |+|.+|......+.=...|..+.+.|.+.||.++.
T Consensus 1 m~~~~-v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~ 40 (343)
T 1e4e_A 1 MNRIK-VAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLY 40 (343)
T ss_dssp -CCEE-EEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCCcE-EEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEE
Confidence 55554 55555443332333356788899999989998664
No 192
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=35.99 E-value=19 Score=29.92 Aligned_cols=41 Identities=17% Similarity=0.247 Sum_probs=25.1
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYG 42 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~G 42 (189)
|+|+ +|+|.+|......+.-...|+.+.+.|.+.||.++.=
T Consensus 1 m~~~-~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~i 41 (364)
T 2i87_A 1 MTKE-NICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDII 41 (364)
T ss_dssp --CE-EEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEEE
T ss_pred CCCc-EEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEEE
Confidence 5655 4555555433323333567888999999999987643
No 193
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=35.61 E-value=58 Score=25.56 Aligned_cols=30 Identities=30% Similarity=0.449 Sum_probs=25.9
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 29 k~vlVTGas~-gIG~aia~~la~~G~~V~~~ 58 (266)
T 3uxy_A 29 KVALVTGAAG-GIGGAVVTALRAAGARVAVA 58 (266)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEC
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3579999988 99999999999999888765
No 194
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=35.57 E-value=31 Score=27.53 Aligned_cols=29 Identities=21% Similarity=0.273 Sum_probs=24.3
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.|.++...+.|.+|+..
T Consensus 13 ~alVTGas~-GIG~aia~~la~~Ga~V~~~ 41 (261)
T 4h15_A 13 RALITAGTK-GAGAATVSLFLELGAQVLTT 41 (261)
T ss_dssp EEEESCCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeccCc-HHHHHHHHHHHHcCCEEEEE
Confidence 458899888 99999999888888888765
No 195
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=35.49 E-value=39 Score=26.10 Aligned_cols=29 Identities=24% Similarity=0.369 Sum_probs=21.8
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 4 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 32 (247)
T 3dii_A 4 GVIVTGGGH-GIGKQICLDFLEAGDKVCFI 32 (247)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 357888877 88888888777777777665
No 196
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=35.38 E-value=79 Score=23.23 Aligned_cols=59 Identities=22% Similarity=0.178 Sum_probs=42.1
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
-++|-+.+-..+. ++ --+.-+...|..+||.+++-|.. =-.+.+.+.+.+.+-.+||+.
T Consensus 18 ~~~vlla~~~gd~-Hd---iG~~~va~~l~~~G~eVi~lG~~-~p~e~lv~aa~~~~~diV~lS 76 (161)
T 2yxb_A 18 RYKVLVAKMGLDG-HD---RGAKVVARALRDAGFEVVYTGLR-QTPEQVAMAAVQEDVDVIGVS 76 (161)
T ss_dssp SCEEEEEEESSSS-CC---HHHHHHHHHHHHTTCEEECCCSB-CCHHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEEEeCCCCc-cH---HHHHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHhcCCCEEEEE
Confidence 3556665544332 22 33445667788899999998877 456778899999999999994
No 197
>4hyl_A Stage II sporulation protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; 1.75A {Haliangium ochraceum}
Probab=35.32 E-value=45 Score=22.47 Aligned_cols=57 Identities=12% Similarity=0.231 Sum_probs=37.0
Q ss_pred CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhhc
Q 045940 109 GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 109 GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~ 181 (189)
-|++.|.++...+. ..+.++.+.+.. ..+...++. .|+ .+.+.+.+|.+++++.+.+
T Consensus 58 sgl~~L~~~~~~~~-----~~g~~l~l~~~~---~~v~~~l~~---~gl-----~~~~~i~~~~~~Al~~~~~ 114 (117)
T 4hyl_A 58 AGLRVLLSLYRHTS-----NQQGALVLVGVS---EEIRDTMEI---TGF-----WNFFTACASMDEALRILGS 114 (117)
T ss_dssp HHHHHHHHHHHHHH-----HTTCEEEEECCC---HHHHHHHHH---HTC-----GGGCEEESCHHHHHHHHCC
T ss_pred HHHHHHHHHHHHHH-----HcCCEEEEEeCC---HHHHHHHHH---hCc-----cceeeecCCHHHHHHHhcc
Confidence 56777766655542 367889898865 344444443 122 2356789999999998864
No 198
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=35.29 E-value=29 Score=25.63 Aligned_cols=32 Identities=19% Similarity=0.111 Sum_probs=19.6
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHH-CCCe
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVE-RKIN 38 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~-~g~~ 38 (189)
|++|.|+.+|..+ .-.+.|+.+.+.+.+ .|+.
T Consensus 1 Mmkilii~~S~~g---~t~~la~~i~~~l~~~~g~~ 33 (198)
T 3b6i_A 1 MAKVLVLYYSMYG---HIETMARAVAEGASKVDGAE 33 (198)
T ss_dssp -CEEEEEECCSSS---HHHHHHHHHHHHHHTSTTCE
T ss_pred CCeEEEEEeCCCc---HHHHHHHHHHHHHhhcCCCE
Confidence 3456666666443 345677788888876 6654
No 199
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=35.17 E-value=39 Score=26.14 Aligned_cols=30 Identities=20% Similarity=0.184 Sum_probs=26.1
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
..|||||+. |+=.++++...+.|.+|+.+-
T Consensus 24 ~vlITGas~-gIG~~la~~l~~~G~~V~~~~ 53 (251)
T 3orf_A 24 NILVLGGSG-ALGAEVVKFFKSKSWNTISID 53 (251)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 579999988 999999999999998888773
No 200
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=35.06 E-value=39 Score=26.55 Aligned_cols=11 Identities=9% Similarity=0.274 Sum_probs=6.8
Q ss_pred eCCHHHHHHHh
Q 045940 169 AKNARDLLQGM 179 (189)
Q Consensus 169 ~~~~ee~~~~l 179 (189)
.-+|||+.+.+
T Consensus 242 ~~~pedvA~~v 252 (277)
T 3tsc_A 242 VAEPEDIADTV 252 (277)
T ss_dssp CBCHHHHHHHH
T ss_pred CCCHHHHHHHH
Confidence 44677766655
No 201
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=35.04 E-value=47 Score=24.19 Aligned_cols=30 Identities=20% Similarity=0.288 Sum_probs=17.4
Q ss_pred CCCCcEEEEeCCCCchH-HHHHHHHHHHcCC
Q 045940 128 IHDKPVGVLNVDGYYDS-LLRFFDKGVEEGF 157 (189)
Q Consensus 128 ~~~kPiill~~~g~~~~-l~~~l~~~~~~g~ 157 (189)
..+||++++++.|+.+. +..+-+.+.+.|+
T Consensus 85 ~~~k~va~fgs~g~~~~a~~~l~~~l~~~G~ 115 (159)
T 3fni_A 85 NEKQAVGIFETGGGDDEPIDPLLSKFRNLGL 115 (159)
T ss_dssp CTTSEEEEECCSSSCBCCHHHHHHHHHHTTC
T ss_pred ccCCEEEEEEcCCCCcHHHHHHHHHHHHCCC
Confidence 46799999987665442 3333334455554
No 202
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=35.00 E-value=31 Score=27.66 Aligned_cols=55 Identities=16% Similarity=0.219 Sum_probs=37.3
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecC
Q 045940 6 RVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPK 69 (189)
Q Consensus 6 ~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~ 69 (189)
++++.-|++.+ .-+.+++.||++|..|+.-+-. .. +.+.+...+.|+++..+.-+
T Consensus 10 KvalVTGas~G-------IG~aiA~~la~~Ga~Vvi~~r~-~~-~~~~~~~~~~g~~~~~~~~D 64 (247)
T 4hp8_A 10 RKALVTGANTG-------LGQAIAVGLAAAGAEVVCAARR-AP-DETLDIIAKDGGNASALLID 64 (247)
T ss_dssp CEEEETTTTSH-------HHHHHHHHHHHTTCEEEEEESS-CC-HHHHHHHHHTTCCEEEEECC
T ss_pred CEEEEeCcCCH-------HHHHHHHHHHHcCCEEEEEeCC-cH-HHHHHHHHHhCCcEEEEEcc
Confidence 56666555443 3346778889999998876655 33 56666677788888888543
No 203
>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1
Probab=34.92 E-value=94 Score=22.72 Aligned_cols=32 Identities=9% Similarity=-0.036 Sum_probs=24.2
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
...+|+||+. |+=.++++-+...|.+|+++-.
T Consensus 40 ~~vlV~Ga~g-giG~~~~~~~~~~G~~V~~~~~ 71 (198)
T 1pqw_A 40 ERVLIHSATG-GVGMAAVSIAKMIGARIYTTAG 71 (198)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHHTCEEEEEES
T ss_pred CEEEEeeCCC-hHHHHHHHHHHHcCCEEEEEeC
Confidence 3468888765 6667778888888999988854
No 204
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=34.92 E-value=50 Score=26.94 Aligned_cols=31 Identities=23% Similarity=0.106 Sum_probs=21.9
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
...+|+|+|..|++ +.+-|+..|.+|+++..
T Consensus 178 ~~VlV~GaG~vG~~--a~qla~~~Ga~Vi~~~~ 208 (348)
T 3two_A 178 TKVGVAGFGGLGSM--AVKYAVAMGAEVSVFAR 208 (348)
T ss_dssp CEEEEESCSHHHHH--HHHHHHHTTCEEEEECS
T ss_pred CEEEEECCcHHHHH--HHHHHHHCCCeEEEEeC
Confidence 45688888665655 55667777889999854
No 205
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=34.91 E-value=40 Score=26.07 Aligned_cols=17 Identities=12% Similarity=0.270 Sum_probs=9.3
Q ss_pred HHHHHHHHCCCeEEEcC
Q 045940 27 DLATQLVERKINLVYGG 43 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GG 43 (189)
.+++.|+++|+.|+.-+
T Consensus 21 a~a~~l~~~G~~V~~~~ 37 (247)
T 3rwb_A 21 AIAARLAADGATVIVSD 37 (247)
T ss_dssp HHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHCCCEEEEEe
Confidence 45555555666655443
No 206
>1req_B Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 1e1c_B* 2req_B* 3req_B* 4req_B* 5req_B* 6req_B* 7req_B*
Probab=34.83 E-value=39 Score=31.10 Aligned_cols=48 Identities=13% Similarity=0.053 Sum_probs=41.3
Q ss_pred ChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 18 RKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 18 ~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
+..+-..+.-+...++..|+.++++|+..- +.+++.|.+.+..++|+.
T Consensus 520 Da~Hd~ga~~va~~l~~aGfeVi~~g~~~t--ee~v~aa~e~~adiv~lS 567 (637)
T 1req_B 520 RRDFGGREGFSSPVWHIAGIDTPQVEGGTT--AEIVEAFKKSGAQVADLC 567 (637)
T ss_dssp HHHHHHHHHHHHHHHHHTTCBCCEEECCCH--HHHHHHHHHHTCSEEEEE
T ss_pred chhhhhhHHHHHHHHHhCCeeEEeCCCCCC--HHHHHHHHhcCCCEEEEe
Confidence 446777788888899999999999988744 999999999999999993
No 207
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=34.82 E-value=55 Score=24.07 Aligned_cols=14 Identities=0% Similarity=0.050 Sum_probs=6.7
Q ss_pred CCCcEEEEeCCCCc
Q 045940 129 HDKPVGVLNVDGYY 142 (189)
Q Consensus 129 ~~kPiill~~~g~~ 142 (189)
.+.++.++....+|
T Consensus 146 ~gi~~~ivrp~~v~ 159 (221)
T 3ew7_A 146 AEFSWTYISPSAMF 159 (221)
T ss_dssp TTSCEEEEECSSCC
T ss_pred cCccEEEEeCccee
Confidence 34455555554444
No 208
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=34.78 E-value=1.5e+02 Score=22.57 Aligned_cols=40 Identities=5% Similarity=-0.193 Sum_probs=29.8
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGG 43 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GG 43 (189)
.+-++|+|+.... .++-+.+....+-+.+.++|+.++.--
T Consensus 3 ~~~~~Ig~i~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~~~ 42 (291)
T 3l49_A 3 LEGKTIGITAIGT--DHDWDLKAYQAQIAEIERLGGTAIALD 42 (291)
T ss_dssp CTTCEEEEEESCC--SSHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCcEEEEEeCCC--CChHHHHHHHHHHHHHHHcCCEEEEEc
Confidence 4567899998753 256566777888888889999977653
No 209
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=34.74 E-value=37 Score=26.66 Aligned_cols=31 Identities=13% Similarity=0.103 Sum_probs=26.7
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||+. |+=.++++...+.|.+|+.+-
T Consensus 28 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~ 58 (260)
T 3gem_A 28 APILITGASQ-RVGLHCALRLLEHGHRVIISY 58 (260)
T ss_dssp CCEEESSTTS-HHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 4679999988 999999999999998888773
No 210
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=34.66 E-value=40 Score=26.40 Aligned_cols=9 Identities=11% Similarity=0.316 Sum_probs=5.6
Q ss_pred CHHHHHHHh
Q 045940 171 NARDLLQGM 179 (189)
Q Consensus 171 ~~ee~~~~l 179 (189)
+|||+.+.+
T Consensus 245 ~p~dvA~~v 253 (278)
T 3sx2_A 245 APEDVANAV 253 (278)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 567666654
No 211
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=34.54 E-value=38 Score=26.68 Aligned_cols=31 Identities=19% Similarity=0.352 Sum_probs=26.1
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||+. |+=.++++...+.|.+|+.+-
T Consensus 17 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~ 47 (266)
T 3p19_A 17 KLVVITGASS-GIGEAIARRFSEEGHPLLLLA 47 (266)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEE
Confidence 4679999988 999999999888898888763
No 212
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=34.38 E-value=40 Score=26.35 Aligned_cols=15 Identities=20% Similarity=0.375 Sum_probs=7.8
Q ss_pred HHHHHHHHCCCeEEE
Q 045940 27 DLATQLVERKINLVY 41 (189)
Q Consensus 27 ~lg~~la~~g~~lv~ 41 (189)
++++.|+++|+.|+.
T Consensus 25 ~ia~~l~~~G~~V~~ 39 (287)
T 3pxx_A 25 SHAVKLAEEGADIIL 39 (287)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCeEEE
Confidence 445555555555543
No 213
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=34.26 E-value=35 Score=29.56 Aligned_cols=28 Identities=32% Similarity=0.280 Sum_probs=25.3
Q ss_pred eEEEcCCCCChhHHHHHHHHh-cCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFD-GGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~-~gg~viGv 66 (189)
.|||||+. |+=.|+++...+ .|.+|+.+
T Consensus 50 aLVTGas~-GIG~AiA~~LA~g~GA~Vv~~ 78 (405)
T 3zu3_A 50 VLVIGAST-GYGLAARITAAFGCGADTLGV 78 (405)
T ss_dssp EEEESCSS-HHHHHHHHHHHHHHCCEEEEE
T ss_pred EEEeCcch-HHHHHHHHHHHHhcCCEEEEE
Confidence 59999998 999999999988 89998876
No 214
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=34.21 E-value=33 Score=26.98 Aligned_cols=30 Identities=20% Similarity=0.299 Sum_probs=22.1
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||.. |+=.++++.-.+.|.+|+.+
T Consensus 13 k~vlITGas~-GIG~~~a~~L~~~G~~V~~~ 42 (311)
T 3o26_A 13 RCAVVTGGNK-GIGFEICKQLSSNGIMVVLT 42 (311)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEecCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 4567788776 77778887777777777666
No 215
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=34.15 E-value=74 Score=25.15 Aligned_cols=39 Identities=13% Similarity=-0.033 Sum_probs=25.1
Q ss_pred CCCCeEEEEEcCC-----------CCC-CChHHHHHHHHHHHHHHHCCCeEE
Q 045940 1 MGKFKRVCVFCGS-----------NSG-NRKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 1 ~~~~~~I~V~g~s-----------~~~-~~~~~~~~A~~lg~~la~~g~~lv 40 (189)
|+ +|+|++++.+ -.. ..--....+..+.+.|+++||.+.
T Consensus 1 M~-~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~ 51 (342)
T 2iuy_A 1 MR-PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVF 51 (342)
T ss_dssp ---CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEE
T ss_pred CC-ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEE
Confidence 44 4678888877 111 113355678889999999988754
No 216
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=34.04 E-value=26 Score=29.62 Aligned_cols=40 Identities=23% Similarity=0.340 Sum_probs=26.7
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|+|+ +|+|++|......+.=...|+.+.+.|-+.||.++.
T Consensus 20 m~~~-~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~ 59 (386)
T 3e5n_A 20 MRKI-RVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVL 59 (386)
T ss_dssp -CCE-EEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred cCCc-eEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEE
Confidence 4444 565555544444566678889999999888888764
No 217
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=33.74 E-value=1.9e+02 Score=23.36 Aligned_cols=143 Identities=18% Similarity=0.217 Sum_probs=68.3
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEecCccccccccC-CCCceEEec--CCHHHHHHHHHH--hcCeeEEecC
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIPKALVPIEISG-QTVGDVLIV--SDMHERKAEMAR--RADAFIALPG 109 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p~~~~~~e~~~-~~~~~~~~~--~~~~~R~~~m~~--~sda~I~lpG 109 (189)
...+|+|+|..|+ ++.+-|+..|. +|+++..+.. ..+... -..+..+.. +++.++-..+.. ..|++|-..|
T Consensus 169 ~~VlV~GaG~vG~--~~~q~a~~~Ga~~Vi~~~~~~~-~~~~~~~~Ga~~~~~~~~~~~~~~v~~~~~g~g~D~vid~~g 245 (348)
T 2d8a_A 169 KSVLITGAGPLGL--LGIAVAKASGAYPVIVSEPSDF-RRELAKKVGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSG 245 (348)
T ss_dssp CCEEEECCSHHHH--HHHHHHHHTTCCSEEEECSCHH-HHHHHHHHTCSEEECTTTSCHHHHHHHHTTTSCEEEEEECSC
T ss_pred CEEEEECCCHHHH--HHHHHHHHcCCCEEEEECCCHH-HHHHHHHhCCCEEECCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 4679999855454 45666777787 8998854321 111100 011222222 234332222211 3577777777
Q ss_pred CcchHHHHHHHHHH----HhcCC-------------CCCcEEEEeCCCCc-hHHHHHHHHHHHcCCCCccc-cCcEEE-e
Q 045940 110 GYGTMEELLEMITW----SQLGI-------------HDKPVGVLNVDGYY-DSLLRFFDKGVEEGFIKSSA-RNIVIS-A 169 (189)
Q Consensus 110 G~GTL~El~~~~~~----~~~~~-------------~~kPiill~~~g~~-~~l~~~l~~~~~~g~i~~~~-~~~i~~-~ 169 (189)
+.-++++....+.- ..+|. +.|-+-+.+...+. ...+..+-+++++|-++.+. ....+- .
T Consensus 246 ~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl 325 (348)
T 2d8a_A 246 APKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGF 325 (348)
T ss_dssp CHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCCCCTTTEEEEEESS
T ss_pred CHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCCChHHhheeeCCCH
Confidence 65566555544310 01111 11122233322122 22223333556677664332 233455 7
Q ss_pred CCHHHHHHHhhc
Q 045940 170 KNARDLLQGMEV 181 (189)
Q Consensus 170 ~~~ee~~~~l~~ 181 (189)
++..|+++.+++
T Consensus 326 ~~~~~A~~~~~~ 337 (348)
T 2d8a_A 326 DKYEEAFELMRA 337 (348)
T ss_dssp TTHHHHHHHHHT
T ss_pred HHHHHHHHHHhC
Confidence 889999998865
No 218
>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}
Probab=33.57 E-value=43 Score=25.81 Aligned_cols=29 Identities=24% Similarity=0.360 Sum_probs=22.7
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|.+|+.+
T Consensus 9 ~vlVTGas~-giG~~ia~~l~~~G~~V~~~ 37 (250)
T 2fwm_X 9 NVWVTGAGK-GIGYATALAFVEAGAKVTGF 37 (250)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 468888877 88888888888888777766
No 219
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=33.57 E-value=8.5 Score=26.68 Aligned_cols=43 Identities=9% Similarity=0.215 Sum_probs=28.7
Q ss_pred CCCCchHHHHHHHHHHHcCCCCccccCcEEE-----eCCHHHHHHHhhcCCC
Q 045940 138 VDGYYDSLLRFFDKGVEEGFIKSSARNIVIS-----AKNARDLLQGMEVPNL 184 (189)
Q Consensus 138 ~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~-----~~~~ee~~~~l~~~~~ 184 (189)
++.+.+.++..+++.++ .|.-.+.|+. -++|+++++.+++|++
T Consensus 29 ~E~e~d~ll~~fe~ite----HP~gSDLIfyP~~~~e~SPEgIv~~IKeWRa 76 (94)
T 3u43_A 29 TEEDDNKLVREFERLTE----HPDGSDLIYYPRDDREDSPEGIVKEIKEWRA 76 (94)
T ss_dssp SHHHHHHHHHHHHHHHC----CTTTTHHHHSCCTTSCSSHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCC----CCCccCeeeeCCCCCCCCHHHHHHHHHHHHH
Confidence 44466677776666543 2344566665 4689999999998854
No 220
>2h1q_A Hypothetical protein; ZP_00559375.1, structural genomics, PSI-2, protein structure initiative; 2.01A {Desulfitobacterium hafniense dcb-2} PDB: 3l5o_A
Probab=33.56 E-value=67 Score=26.13 Aligned_cols=69 Identities=13% Similarity=0.141 Sum_probs=47.3
Q ss_pred HHHHHhcCeeEEecCC--cchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcE--EEeC
Q 045940 95 AEMARRADAFIALPGG--YGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIV--ISAK 170 (189)
Q Consensus 95 ~~m~~~sda~I~lpGG--~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i--~~~~ 170 (189)
..++..||++++-+=- -||+++|.+.. ...++++++++.--+.| .++ +.|. +.+ ..+.
T Consensus 181 e~ll~~aD~viiTGsTlvN~Ti~~lL~~~------~~a~~vvl~GPS~p~~P--~lf----~~Gv------~~l~G~~V~ 242 (270)
T 2h1q_A 181 EFILPECDYVYITCASVVDKTLPRLLELS------RNARRITLVGPGTPLAP--VLF----EHGL------QELSGFMVK 242 (270)
T ss_dssp HHHGGGCSEEEEETHHHHHTCHHHHHHHT------TTSSEEEEESTTCCCCG--GGG----GTTC------SEEEEEEES
T ss_pred HHHhhcCCEEEEEeeeeecCCHHHHHHhC------ccCCeEEEEecChhhhH--HHH----hcCc------CEEEEeEec
Confidence 3477899988876543 58999987665 35679999998754444 122 2221 333 5678
Q ss_pred CHHHHHHHhhc
Q 045940 171 NARDLLQGMEV 181 (189)
Q Consensus 171 ~~ee~~~~l~~ 181 (189)
|++.+++.|++
T Consensus 243 D~~~~~~~i~~ 253 (270)
T 2h1q_A 243 DNARAFRIVAG 253 (270)
T ss_dssp CHHHHHHHHTT
T ss_pred CHHHHHHHHHc
Confidence 99999999875
No 221
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=33.55 E-value=57 Score=26.09 Aligned_cols=30 Identities=20% Similarity=0.107 Sum_probs=20.8
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv 40 (189)
++|++|+|+|.... ...++..|+++|+.|+
T Consensus 13 ~~~~~I~VIG~G~m---------G~~iA~~la~~G~~V~ 42 (302)
T 1f0y_A 13 IIVKHVTVIGGGLM---------GAGIAQVAAATGHTVV 42 (302)
T ss_dssp CCCCEEEEECCSHH---------HHHHHHHHHHTTCEEE
T ss_pred ccCCEEEEECCCHH---------HHHHHHHHHhCCCeEE
Confidence 45778999987533 3356677788888765
No 222
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=33.52 E-value=39 Score=26.15 Aligned_cols=29 Identities=28% Similarity=0.261 Sum_probs=17.4
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 14 ~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 42 (252)
T 3f1l_A 14 IILVTGASD-GIGREAAMTYARYGATVILL 42 (252)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 446666665 66666666666666665554
No 223
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=33.29 E-value=34 Score=26.58 Aligned_cols=10 Identities=30% Similarity=0.531 Sum_probs=6.3
Q ss_pred CHHHHHHHhh
Q 045940 171 NARDLLQGME 180 (189)
Q Consensus 171 ~~ee~~~~l~ 180 (189)
+|||+.+.+.
T Consensus 210 ~p~dva~~v~ 219 (250)
T 3nyw_A 210 QPDDLLNTIR 219 (250)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777666554
No 224
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=33.28 E-value=34 Score=27.13 Aligned_cols=29 Identities=24% Similarity=0.413 Sum_probs=20.0
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 35 ~~lVTGas~-GIG~aia~~la~~G~~V~~~ 63 (275)
T 4imr_A 35 TALVTGSSR-GIGAAIAEGLAGAGAHVILH 63 (275)
T ss_dssp EEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 457777766 77777777777777766655
No 225
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=33.23 E-value=21 Score=24.71 Aligned_cols=52 Identities=15% Similarity=0.197 Sum_probs=34.0
Q ss_pred CCCCcEEEEeCCCCchHHHHHHH-HHHHcCCCCccccCcEEEeCCHHHHHHHhhc
Q 045940 128 IHDKPVGVLNVDGYYDSLLRFFD-KGVEEGFIKSSARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 128 ~~~kPiill~~~g~~~~l~~~l~-~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~ 181 (189)
.+-+|++.++.+|.-+.+++.++ .+-....|+-+.... ..+|.+|+.+.|++
T Consensus 16 h~l~pvv~IGk~GlT~~vi~ei~~aL~~~ELIKVkvl~~--~~~~~~e~a~~la~ 68 (98)
T 1jo0_A 16 HHLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAGA--DRETKQLIINAIVR 68 (98)
T ss_dssp TTBCCSEEECTTCSCHHHHHHHHHHHHHHSEEEEEETTC--CHHHHHHHHHHHHH
T ss_pred cCCCCeEEECCCCCCHHHHHHHHHHHHHCCeEEEEEeCC--CHHHHHHHHHHHHH
Confidence 35589999999999999999887 455544444322211 12456677777754
No 226
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=33.19 E-value=28 Score=28.67 Aligned_cols=37 Identities=22% Similarity=0.289 Sum_probs=27.3
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
++|+|.+|......+.=...|..+.+.|-+.||.++.
T Consensus 4 ~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~ 40 (346)
T 3se7_A 4 MKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFY 40 (346)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEE
Confidence 4566665554444666688999999999999998774
No 227
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=33.16 E-value=14 Score=27.27 Aligned_cols=32 Identities=22% Similarity=0.418 Sum_probs=16.0
Q ss_pred CCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCC
Q 045940 3 KFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKI 37 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~ 37 (189)
+|++|.|+.+|..++.. +.|+++++.|.+.|+
T Consensus 8 ~~~ki~I~Y~S~tGnT~---~~A~~ia~~l~~~g~ 39 (167)
T 1ykg_A 8 EMPGITIISASQTGNAR---RVAEALRDDLLAAKL 39 (167)
T ss_dssp ----CEEEEECSSSHHH---HHHHHHHHHHHHHTC
T ss_pred CCCeEEEEEECCchHHH---HHHHHHHHHHHHCCC
Confidence 45566666666665333 455566666655544
No 228
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=33.08 E-value=44 Score=25.82 Aligned_cols=29 Identities=34% Similarity=0.568 Sum_probs=22.8
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 9 ~~lVTGas~-gIG~aia~~l~~~G~~V~~~ 37 (257)
T 3tpc_A 9 VFIVTGASS-GLGAAVTRMLAQEGATVLGL 37 (257)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 468888877 88888888888888777766
No 229
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=33.07 E-value=64 Score=26.30 Aligned_cols=77 Identities=22% Similarity=0.281 Sum_probs=45.1
Q ss_pred HHHHHHHHhcCeeEEec--CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCC---Ccc-----
Q 045940 92 ERKAEMARRADAFIALP--GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFI---KSS----- 161 (189)
Q Consensus 92 ~R~~~m~~~sda~I~lp--GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i---~~~----- 161 (189)
+....+...||++|.-. -|+|.. +.|++ ..++|++..+..| +.+++ +++.- +..
T Consensus 265 ~~~~~~~~~adv~v~pS~~E~~~~~--~lEAm------a~G~PvI~s~~~g----~~e~v----~~~~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 265 ERVDMMYNACDVIVNCSSGEGFGLC--SAEGA------VLGKPLIISAVGG----ADDYF----SGDCVYKIKPSAWISV 328 (413)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHH--HHHHH------TTTCCEEEECCHH----HHHHS----CTTTSEEECCCEEEEC
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCcH--HHHHH------HcCCCEEEcCCCC----hHHHH----ccCccccccccccccc
Confidence 34455678999888743 344433 56777 4799999887542 22322 22110 000
Q ss_pred --ccCc--EEEeCCHHHHHHHhhcCCCC
Q 045940 162 --ARNI--VISAKNARDLLQGMEVPNLL 185 (189)
Q Consensus 162 --~~~~--i~~~~~~ee~~~~l~~~~~~ 185 (189)
.... +.-..|++++.+.| +....
T Consensus 329 ~~~~G~~gl~~~~d~~~la~~i-~l~~~ 355 (413)
T 3oy2_A 329 DDRDGIGGIEGIIDVDDLVEAF-TFFKD 355 (413)
T ss_dssp TTTCSSCCEEEECCHHHHHHHH-HHTTS
T ss_pred ccccCcceeeCCCCHHHHHHHH-HHhcC
Confidence 0133 66667999999998 76544
No 230
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=33.06 E-value=44 Score=25.99 Aligned_cols=28 Identities=29% Similarity=0.482 Sum_probs=13.7
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 11 ~lVTGas~-gIG~a~a~~l~~~G~~V~~~ 38 (255)
T 4eso_A 11 AIVIGGTH-GMGLATVRRLVEGGAEVLLT 38 (255)
T ss_dssp EEEETCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 34555544 55555555544444444443
No 231
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=32.99 E-value=29 Score=27.83 Aligned_cols=29 Identities=24% Similarity=0.245 Sum_probs=25.9
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++.-.+.|.+|+-.
T Consensus 11 valVTGas~-GIG~aia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 11 TALVTGSAR-GLGFAYAEGLAAAGARVILN 39 (255)
T ss_dssp EEEETTCSS-HHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 569999998 99999999999999987765
No 232
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=32.95 E-value=44 Score=25.99 Aligned_cols=15 Identities=20% Similarity=0.195 Sum_probs=7.2
Q ss_pred HHHHHHHHCCCeEEE
Q 045940 27 DLATQLVERKINLVY 41 (189)
Q Consensus 27 ~lg~~la~~g~~lv~ 41 (189)
++.+.|+++|+.|+.
T Consensus 28 ~ia~~l~~~G~~V~~ 42 (267)
T 1iy8_A 28 ATAVRLAAEGAKLSL 42 (267)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCEEEE
Confidence 444444555555443
No 233
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=32.87 E-value=44 Score=26.31 Aligned_cols=29 Identities=17% Similarity=0.316 Sum_probs=17.0
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 13 ~~lVTGas~-gIG~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 13 VAFVTGAAR-GQGRSHAVRLAQEGADIIAV 41 (286)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-hHHHHHHHHHHHCCCeEEEE
Confidence 346666655 66666666666666555554
No 234
>1pfk_A Phosphofructokinase; transferase(phosphotransferase); HET: FBP ADP; 2.40A {Escherichia coli} SCOP: c.89.1.1 PDB: 2pfk_A
Probab=32.87 E-value=36 Score=28.47 Aligned_cols=54 Identities=19% Similarity=0.146 Sum_probs=36.8
Q ss_pred EEEcCCCCCC--ChHHHHHHHHHHHHHHHCCCe-EEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 8 CVFCGSNSGN--RKIFSDAALDLATQLVERKIN-LVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 8 ~V~g~s~~~~--~~~~~~~A~~lg~~la~~g~~-lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
++.|+||..+ +++.+ .++.+.|-+.|+. |++=||. |-|..+.+=+. .+-.+|||
T Consensus 67 t~LGssR~~~~~~~~~~---~~~~~~l~~~~Id~LvvIGGd-gS~~~a~~L~~-~~i~vvgi 123 (320)
T 1pfk_A 67 TFLGSARFPEFRDENIR---AVAIENLKKRGIDALVVIGGD-GSYMGAMRLTE-MGFPCIGL 123 (320)
T ss_dssp CTTCCCCCGGGGSHHHH---HHHHHHHHHTTCCEEEEEECH-HHHHHHHHHHH-TTCCEEEE
T ss_pred CeeccCCCCCCCCHHHH---HHHHHHHHHcCCCEEEEECCC-chHHHHHHHHh-hCCCEEEE
Confidence 3557777643 33333 3566777788765 5566677 99998888664 58899998
No 235
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=32.82 E-value=45 Score=25.88 Aligned_cols=18 Identities=11% Similarity=0.117 Sum_probs=10.1
Q ss_pred HHHHHHHHHCCCeEEEcC
Q 045940 26 LDLATQLVERKINLVYGG 43 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GG 43 (189)
+++++.|+++|+.|+.-+
T Consensus 22 ~~ia~~l~~~G~~V~~~~ 39 (259)
T 4e6p_A 22 RAFAEAYVREGATVAIAD 39 (259)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEe
Confidence 355555666666655443
No 236
>2kln_A Probable sulphate-transport transmembrane protein; SLC26, sulfate, antisigma factor antagonist, ensemble structures, transport protein; NMR {Mycobacterium bovis}
Probab=32.79 E-value=1.2e+02 Score=20.86 Aligned_cols=60 Identities=7% Similarity=0.008 Sum_probs=39.8
Q ss_pred CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhhc
Q 045940 109 GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 109 GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~ 181 (189)
-|+++|.++...+. ..+..++|.+... .+.+.++ ..|+.+ ......+.+|.+|+++.+++
T Consensus 64 sgl~~L~~~~~~~~-----~~g~~l~l~~~~~---~v~~~l~---~~gl~~--~~~~~~i~~t~~~Al~~~~~ 123 (130)
T 2kln_A 64 TALDALDQLRTELL-----RRGIVFAMARVKQ---DLRESLR---AASLLD--KIGEDHIFMTLPTAVQAFRR 123 (130)
T ss_dssp STTTHHHHHHHHHH-----TTTEEEEEECCSS---HHHHHHH---HCTTHH--HHCTTEEESCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHH-----HCCCEEEEEcCCH---HHHHHHH---HcCChh--hcCcceeECCHHHHHHHHHh
Confidence 57899988877764 4678898988653 4444443 233321 11223688999999998875
No 237
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=32.78 E-value=44 Score=26.34 Aligned_cols=30 Identities=23% Similarity=0.331 Sum_probs=23.4
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 32 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGGSR-GIGAAIAKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3568888887 88888888888888777665
No 238
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=32.77 E-value=44 Score=26.37 Aligned_cols=29 Identities=31% Similarity=0.483 Sum_probs=16.9
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 33 ~~lVTGas~-GIG~aia~~la~~G~~V~~~ 61 (273)
T 3uf0_A 33 TAVVTGAGS-GIGRAIAHGYARAGAHVLAW 61 (273)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 346666655 66666666666666555544
No 239
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=32.74 E-value=44 Score=26.71 Aligned_cols=29 Identities=14% Similarity=0.322 Sum_probs=17.6
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 30 ~~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (299)
T 3t7c_A 30 VAFITGAAR-GQGRSHAITLAREGADIIAI 58 (299)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 456666665 66666666666666665554
No 240
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=32.66 E-value=46 Score=25.48 Aligned_cols=27 Identities=15% Similarity=0.449 Sum_probs=12.6
Q ss_pred EEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 39 LVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 39 lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
|||||.. |+=.++++...+.|-+|+.+
T Consensus 5 lVTGas~-gIG~~~a~~l~~~G~~V~~~ 31 (257)
T 1fjh_A 5 VISGCAT-GIGAATRKVLEAAGHQIVGI 31 (257)
T ss_dssp EEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4455444 44444444444444444433
No 241
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=32.61 E-value=38 Score=26.20 Aligned_cols=15 Identities=27% Similarity=0.344 Sum_probs=7.2
Q ss_pred HHHHHHHHCCCeEEE
Q 045940 27 DLATQLVERKINLVY 41 (189)
Q Consensus 27 ~lg~~la~~g~~lv~ 41 (189)
.+++.|+++|+.|+.
T Consensus 24 a~a~~l~~~G~~V~~ 38 (248)
T 3op4_A 24 AIAELLAERGAKVIG 38 (248)
T ss_dssp HHHHHHHHTTCEEEE
T ss_pred HHHHHHHHCCCEEEE
Confidence 444444555555443
No 242
>1th8_B Anti-sigma F factor antagonist; SPOIIAB, SPOIIAA, anti-ANTI-sigma, sporulation, serine kinase, transcription; HET: ADP; 2.40A {Geobacillus stearothermophilus} SCOP: c.13.2.1 PDB: 1thn_B* 1tid_B* 1til_B* 1auz_A 1buz_A
Probab=32.59 E-value=52 Score=21.82 Aligned_cols=57 Identities=23% Similarity=0.294 Sum_probs=35.8
Q ss_pred CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhhc
Q 045940 109 GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 109 GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~ 181 (189)
.|++.|.++...+. ..++.+.+.+.. ..+...++.. |+ .+.+.+.+|.+++++.+.+
T Consensus 59 sgl~~L~~~~~~~~-----~~g~~l~l~~~~---~~v~~~l~~~---gl-----~~~~~i~~~~~~Al~~~~~ 115 (116)
T 1th8_B 59 SGLGVILGRYKQIK-----NVGGQMVVCAVS---PAVKRLFDMS---GL-----FKIIRVEADEQFALQALGV 115 (116)
T ss_dssp HHHHHHHHHHHHHH-----HTTCCEEEESCC---HHHHHHHHHH---TG-----GGTSEEESSHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHH-----HhCCeEEEEeCC---HHHHHHHHHh---CC-----ceeEEEeCCHHHHHHhccC
Confidence 45666666655442 357888888765 4455545432 21 2345789999999988754
No 243
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=32.58 E-value=1.4e+02 Score=23.46 Aligned_cols=67 Identities=13% Similarity=0.079 Sum_probs=40.9
Q ss_pred HHHHHhcCeeEEe------------cCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHH-HHcCCCCcc
Q 045940 95 AEMARRADAFIAL------------PGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKG-VEEGFIKSS 161 (189)
Q Consensus 95 ~~m~~~sda~I~l------------pGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~-~~~g~i~~~ 161 (189)
..+...||++|.- ..|+|+- +.|+++ .++|++..+..| +.+++++. -..|+
T Consensus 226 ~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~~--~~EAma------~G~PvI~s~~~~----~~e~~~~~~~~~g~---- 289 (342)
T 2iuy_A 226 LDLLASAHAVLAMSQAVTGPWGGIWCEPGATV--VSEAAV------SGTPVVGTGNGC----LAEIVPSVGEVVGY---- 289 (342)
T ss_dssp HHHHHHCSEEEECCCCCCCTTCSCCCCCCCHH--HHHHHH------TTCCEEECCTTT----HHHHGGGGEEECCS----
T ss_pred HHHHHhCCEEEECCcccccccccccccCccHH--HHHHHh------cCCCEEEcCCCC----hHHHhcccCCCceE----
Confidence 5567899998864 3455654 677774 799999987653 22222110 01122
Q ss_pred ccCcEEEeC-CHHHHHHHhhcCC
Q 045940 162 ARNIVISAK-NARDLLQGMEVPN 183 (189)
Q Consensus 162 ~~~~i~~~~-~~ee~~~~l~~~~ 183 (189)
+++ |++++.+.|.+..
T Consensus 290 ------~~~~d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 290 ------GTDFAPDEARRTLAGLP 306 (342)
T ss_dssp ------SSCCCHHHHHHHHHTSC
T ss_pred ------EcCCCHHHHHHHHHHHH
Confidence 223 8899988887654
No 244
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=32.57 E-value=1.3e+02 Score=23.64 Aligned_cols=55 Identities=18% Similarity=0.184 Sum_probs=35.7
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
+++-|-|+++ -.-+++++.|+++|+.|+.-+....--+++.+...+.++.+..+.
T Consensus 34 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 88 (275)
T 4imr_A 34 RTALVTGSSR--------GIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELA 88 (275)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 4566666654 244578888889999987665554555555555555677766664
No 245
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=32.47 E-value=46 Score=25.62 Aligned_cols=17 Identities=6% Similarity=0.198 Sum_probs=9.0
Q ss_pred HHHHHHHHCCCeEEEcC
Q 045940 27 DLATQLVERKINLVYGG 43 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GG 43 (189)
.+.+.|+++|+.|+.-+
T Consensus 22 ~ia~~l~~~G~~V~~~~ 38 (249)
T 2ew8_A 22 AIAERFAVEGADIAIAD 38 (249)
T ss_dssp HHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHCCCEEEEEc
Confidence 45555555666655443
No 246
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=32.46 E-value=39 Score=26.13 Aligned_cols=30 Identities=30% Similarity=0.533 Sum_probs=23.9
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 10 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 39 (257)
T 3tl3_A 10 AVAVVTGGAS-GLGLATTKRLLDAGAQVVVL 39 (257)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHHTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 3568888887 88888888888888887766
No 247
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=32.42 E-value=45 Score=26.39 Aligned_cols=10 Identities=10% Similarity=0.086 Sum_probs=6.2
Q ss_pred CHHHHHHHhh
Q 045940 171 NARDLLQGME 180 (189)
Q Consensus 171 ~~ee~~~~l~ 180 (189)
+|||+.+.+.
T Consensus 245 ~pedvA~~v~ 254 (280)
T 4da9_A 245 EPEDIGNIVA 254 (280)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777766553
No 248
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=32.42 E-value=64 Score=23.85 Aligned_cols=27 Identities=22% Similarity=0.195 Sum_probs=15.2
Q ss_pred EEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 39 LVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 39 lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
+|+||.. ++=.++++..++.|-+|+++
T Consensus 4 lVtGatG-~iG~~l~~~L~~~g~~V~~~ 30 (224)
T 3h2s_A 4 AVLGATG-RAGSAIVAEARRRGHEVLAV 30 (224)
T ss_dssp EEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEcCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 5666544 55555555555555555555
No 249
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=32.41 E-value=27 Score=28.37 Aligned_cols=34 Identities=21% Similarity=0.178 Sum_probs=23.4
Q ss_pred cCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 101 ADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 101 sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
.| .|+.-||=||+.|+...+.-. ..+.|+.++..
T Consensus 64 ~d-~vv~~GGDGTl~~v~~~l~~~---~~~~~l~iiP~ 97 (304)
T 3s40_A 64 VD-LIIVFGGDGTVFECTNGLAPL---EIRPTLAIIPG 97 (304)
T ss_dssp CS-EEEEEECHHHHHHHHHHHTTC---SSCCEEEEEEC
T ss_pred CC-EEEEEccchHHHHHHHHHhhC---CCCCcEEEecC
Confidence 35 456678999999998776311 14578888854
No 250
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=32.33 E-value=46 Score=25.75 Aligned_cols=10 Identities=0% Similarity=0.126 Sum_probs=6.6
Q ss_pred CHHHHHHHhh
Q 045940 171 NARDLLQGME 180 (189)
Q Consensus 171 ~~ee~~~~l~ 180 (189)
+|||+.+.+.
T Consensus 212 ~~~dvA~~v~ 221 (254)
T 1hdc_A 212 EPGEIAGAVV 221 (254)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 7777766553
No 251
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=32.26 E-value=45 Score=26.34 Aligned_cols=28 Identities=29% Similarity=0.425 Sum_probs=16.0
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 8 ~lVTGas~-GIG~aia~~la~~G~~V~~~ 35 (281)
T 3zv4_A 8 ALITGGAS-GLGRALVDRFVAEGARVAVL 35 (281)
T ss_dssp EEEETCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCc-HHHHHHHHHHHHCcCEEEEE
Confidence 45566555 66666666555555555544
No 252
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=32.20 E-value=1.7e+02 Score=22.32 Aligned_cols=37 Identities=8% Similarity=-0.029 Sum_probs=22.1
Q ss_pred CCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 3 KFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
+.++|+|+.... .++-+.+....+-+.+.+.|+.++.
T Consensus 7 ~~~~Ig~i~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~ 43 (293)
T 3l6u_A 7 KRNIVGFTIVND--KHEFAQRLINAFKAEAKANKYEALV 43 (293)
T ss_dssp --CEEEEEESCS--CSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEEEEecC--CcHHHHHHHHHHHHHHHHcCCEEEE
Confidence 456788887653 2455555566666666667766554
No 253
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=32.13 E-value=12 Score=28.26 Aligned_cols=32 Identities=16% Similarity=0.021 Sum_probs=18.2
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCC
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERK 36 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g 36 (189)
++|++|.|+.+|..++ -.+.|+++.+.+.+.+
T Consensus 4 ~~~~kiliiy~S~~Gn---T~~lA~~ia~~l~~~~ 35 (193)
T 3d7n_A 4 NSSSNTVVVYHSGYGH---THRMAEAVAEGAEATL 35 (193)
T ss_dssp --CCCEEEEECCSSSH---HHHHHHHHHHHHTCEE
T ss_pred CCCCEEEEEEECCChH---HHHHHHHHHHHhhhcc
Confidence 4566777777776542 3356666666665533
No 254
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=32.10 E-value=41 Score=26.05 Aligned_cols=18 Identities=6% Similarity=0.270 Sum_probs=10.0
Q ss_pred HHHHHHHHCCCeEEEcCC
Q 045940 27 DLATQLVERKINLVYGGG 44 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GGg 44 (189)
.+.+.|+++|+.|+.-+.
T Consensus 15 aia~~l~~~G~~V~~~~r 32 (248)
T 3asu_A 15 CITRRFIQQGHKVIATGR 32 (248)
T ss_dssp HHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHCCCEEEEEeC
Confidence 455555666666554443
No 255
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=31.87 E-value=36 Score=26.84 Aligned_cols=30 Identities=33% Similarity=0.508 Sum_probs=25.3
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 15 k~vlVTGas~-GIG~aia~~l~~~G~~V~~~ 44 (269)
T 3vtz_A 15 KVAIVTGGSS-GIGLAVVDALVRYGAKVVSV 44 (269)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4568999988 99999999888888888776
No 256
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=31.85 E-value=1.6e+02 Score=22.41 Aligned_cols=55 Identities=22% Similarity=0.147 Sum_probs=29.9
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC-CCChhHHHHHHHHhcCCeEEEE
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGG-SVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg-~~GlM~a~a~ga~~~gg~viGv 66 (189)
-+++-|-|+++ -.-+.+++.|+++|+.++.-.. ...-.+++.+...+.|+++..+
T Consensus 4 ~k~~lVTGas~--------gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 59 (246)
T 3osu_A 4 TKSALVTGASR--------GIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAI 59 (246)
T ss_dssp SCEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEE
T ss_pred CCEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 35566666654 2334667777788888754322 2133344444444456666555
No 257
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=31.79 E-value=48 Score=25.33 Aligned_cols=30 Identities=27% Similarity=0.315 Sum_probs=25.2
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||.. |+=.++++...+.|-+|+.+
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 37 (241)
T 1dhr_A 8 RRVLVYGGRG-ALGSRCVQAFRARNWWVASI 37 (241)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHTTTCEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHhCCCEEEEE
Confidence 3578999988 99999999888888888776
No 258
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.75 E-value=57 Score=25.36 Aligned_cols=41 Identities=27% Similarity=0.336 Sum_probs=19.7
Q ss_pred HHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 26 LDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
+++++.|+++|+.|+.-+...--.+.+.+...+.|+++..+
T Consensus 25 ~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 65 (264)
T 3ucx_A 25 TTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSV 65 (264)
T ss_dssp HHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 35555666667766554443222233333333345555554
No 259
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=31.74 E-value=45 Score=28.97 Aligned_cols=54 Identities=15% Similarity=0.133 Sum_probs=36.6
Q ss_pred EEcCCCCCC-----ChHHHHHHHHHHHHHHHCCCe-EEEcCCCCChhHHHHHHHH---hcC--CeEEEE
Q 045940 9 VFCGSNSGN-----RKIFSDAALDLATQLVERKIN-LVYGGGSVGLMGLVSQTIF---DGG--CHVLGV 66 (189)
Q Consensus 9 V~g~s~~~~-----~~~~~~~A~~lg~~la~~g~~-lv~GGg~~GlM~a~a~ga~---~~g--g~viGv 66 (189)
+.|+||... +++.+ .++.+.|.+.|+. ||+=||. |-|..+.+=+. +.| -.+|||
T Consensus 75 iLGSsR~~~~~~~~~~~~~---~~~~~~l~~~~Id~Lv~IGGd-gS~~~A~~L~~~~~~~g~~i~vIGi 139 (419)
T 3hno_A 75 AFGSCRYKLKSLEQNRREY---ERLIEVFKAHDIGYFFYNGGG-DSADTCLKVSQLSGTLGYPIQAIHV 139 (419)
T ss_dssp TTCCCCCC------CHHHH---HHHHHHHHHTTEEEEEEEESH-HHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred eecCCCCCccccccCHHHH---HHHHHHHHHcCCCEEEEeCCc-hHHHHHHHHHHHHHHhCCCccEEEe
Confidence 567777653 33333 4566778888877 6677777 99988877654 334 689998
No 260
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=31.72 E-value=90 Score=25.56 Aligned_cols=70 Identities=16% Similarity=0.230 Sum_probs=40.7
Q ss_pred HHHHHHHHhcCeeEEec--CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEe
Q 045940 92 ERKAEMARRADAFIALP--GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISA 169 (189)
Q Consensus 92 ~R~~~m~~~sda~I~lp--GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~ 169 (189)
+....+...||++|.-. .|+|+- +.|++. .++|||..+..|+ .++ +++ .....+.-.
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~~--~~Eama------~G~PvI~~~~~~~----~e~----i~~-----~~~g~~~~~ 375 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGLV--AMEAQA------SGTPVIAARVGGL----PIA----VAE-----GETGLLVDG 375 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCHH--HHHHHH------TTCCEEEESCTTH----HHH----SCB-----TTTEEEESS
T ss_pred HHHHHHHHhCCEEEECccccCCchH--HHHHHH------cCCCEEecCCCCh----hHH----hhC-----CCcEEECCC
Confidence 34456678999877543 245543 567764 7999999876532 221 111 111222223
Q ss_pred CCHHHHHHHhhcC
Q 045940 170 KNARDLLQGMEVP 182 (189)
Q Consensus 170 ~~~ee~~~~l~~~ 182 (189)
+|++++.+.|.+.
T Consensus 376 ~d~~~la~~i~~l 388 (438)
T 3c48_A 376 HSPHAWADALATL 388 (438)
T ss_dssp CCHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 4889888887654
No 261
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=31.66 E-value=47 Score=25.98 Aligned_cols=29 Identities=24% Similarity=0.331 Sum_probs=20.6
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++.-.+.|-+|+.+
T Consensus 32 ~vlVTGas~-GIG~aia~~l~~~G~~Vi~~ 60 (281)
T 3ppi_A 32 SAIVSGGAG-GLGEATVRRLHADGLGVVIA 60 (281)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 457777776 77777777777777776655
No 262
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=31.62 E-value=48 Score=25.92 Aligned_cols=29 Identities=21% Similarity=0.473 Sum_probs=23.4
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|.+|+.+
T Consensus 10 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 38 (264)
T 2dtx_A 10 VVIVTGASM-GIGRAIAERFVDEGSKVIDL 38 (264)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 468888887 88888888888888877766
No 263
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=31.60 E-value=2e+02 Score=22.97 Aligned_cols=58 Identities=16% Similarity=0.073 Sum_probs=0.0
Q ss_pred CCCC--eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC----------CChhHHHHHHHHhcCCeEEEE
Q 045940 1 MGKF--KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS----------VGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 1 ~~~~--~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~----------~GlM~a~a~ga~~~gg~viGv 66 (189)
|+.+ ++|-|.|+++ -.-+.+++.|+++|+.|+.-+.. ..-.+...+...+.|+++..+
T Consensus 22 m~~l~gk~vlVTGas~--------GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (322)
T 3qlj_A 22 MGVVDGRVVIVTGAGG--------GIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVAD 91 (322)
T ss_dssp CCTTTTCEEEETTTTS--------HHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEE
T ss_pred hcccCCCEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEE
No 264
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=31.58 E-value=49 Score=25.23 Aligned_cols=32 Identities=22% Similarity=0.275 Sum_probs=17.3
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGG 44 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg 44 (189)
++|-|.|+++ -.-+.+.+.|+++|+.|+.-+.
T Consensus 3 k~vlVTGas~--------giG~~~a~~l~~~G~~V~~~~r 34 (239)
T 2ekp_A 3 RKALVTGGSR--------GIGRAIAEALVARGYRVAIASR 34 (239)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 3455556553 2334555666666776655443
No 265
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=31.57 E-value=47 Score=26.27 Aligned_cols=28 Identities=18% Similarity=0.328 Sum_probs=14.0
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 28 ~lVTGas~-GIG~~ia~~la~~G~~V~~~ 55 (281)
T 3v2h_A 28 AVITGSTS-GIGLAIARTLAKAGANIVLN 55 (281)
T ss_dssp EEEETCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 35555554 55555555555555444433
No 266
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=31.56 E-value=48 Score=26.18 Aligned_cols=59 Identities=17% Similarity=0.080 Sum_probs=36.0
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
.+-++|-|-|+++ -.-+++++.|+++|+.|+.-+...--.+.+.+...+.|+.+..+.-
T Consensus 22 ~~~k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~ 80 (279)
T 3sju_A 22 SRPQTAFVTGVSS--------GIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSC 80 (279)
T ss_dssp ---CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred cCCCEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEC
Confidence 3446777778775 2445778888899999876655523334444444455777776643
No 267
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=31.50 E-value=49 Score=25.44 Aligned_cols=28 Identities=14% Similarity=0.271 Sum_probs=16.1
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||.. |+=.++++...+.|-+|+.+
T Consensus 8 vlVTGas~-giG~~ia~~l~~~G~~V~~~ 35 (245)
T 1uls_A 8 VLITGAAH-GIGRATLELFAKEGARLVAC 35 (245)
T ss_dssp EEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 45666655 66666666555555555544
No 268
>3npg_A Uncharacterized DUF364 family protein; protein with unknown function from DUF364 family, structural genomics; 2.70A {Pyrococcus horikoshii}
Probab=31.47 E-value=76 Score=25.37 Aligned_cols=69 Identities=16% Similarity=0.208 Sum_probs=45.6
Q ss_pred HHHHhcCeeEEecCC--cchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcE--EEeCC
Q 045940 96 EMARRADAFIALPGG--YGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIV--ISAKN 171 (189)
Q Consensus 96 ~m~~~sda~I~lpGG--~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i--~~~~~ 171 (189)
.++..||++++-+=- -||++++.+.. ...++++++++..=+.|- ++ .+.| .+.+ ..+.|
T Consensus 160 ~~l~~~D~v~iTGsTlvN~Ti~~lL~~~------~~~~~vvl~GPS~~~~P~--~~---~~~G------v~~l~g~~v~d 222 (249)
T 3npg_A 160 HILPEVDGIIASASCIVNGTLDMILDRA------KKAKLIVITGPTGQLLPE--FL---KGTK------VTHLASMKVTN 222 (249)
T ss_dssp HHGGGCSEEEEETTHHHHTCHHHHHHHC------SSCSEEEEESGGGCSCGG--GG---TTSS------CCEEEEEEESC
T ss_pred hhhccCCEEEEEeeeeccCCHHHHHHhC------cccCeEEEEecCchhhHH--HH---hhCC------ccEEEEEEecC
Confidence 477899988876544 58999987655 456788999876433331 11 1222 1333 56789
Q ss_pred HHHHHHHhhc
Q 045940 172 ARDLLQGMEV 181 (189)
Q Consensus 172 ~ee~~~~l~~ 181 (189)
++.+++.|+.
T Consensus 223 ~~~~l~~i~~ 232 (249)
T 3npg_A 223 IEKALVKLKL 232 (249)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHc
Confidence 9999998864
No 269
>1w5f_A Cell division protein FTSZ; complete proteome, GTP-binding, multigene family, septation, tubulin, filament, Z-ring, GTPase, domain swapped; HET: G2P; 2.0A {Thermotoga maritima} SCOP: c.32.1.1 d.79.2.1
Probab=31.44 E-value=96 Score=26.18 Aligned_cols=55 Identities=20% Similarity=0.419 Sum_probs=30.8
Q ss_pred CCCCChHH-HHHHHHHHHHHHH----CCCeEEE---cCCC-CChhHHHHHHHHhcCCeEEEEec
Q 045940 14 NSGNRKIF-SDAALDLATQLVE----RKINLVY---GGGS-VGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 14 ~~~~~~~~-~~~A~~lg~~la~----~g~~lv~---GGg~-~GlM~a~a~ga~~~gg~viGv~p 68 (189)
..+++++. ++.|.+.-..|.+ +..-+++ |||+ +|.=-.+++-+.+.|..+++|.|
T Consensus 80 GAG~n~~~G~~~aee~~d~I~~~le~~d~~~i~as~GGGTGSG~ap~la~~~ke~g~lt~~Vvt 143 (353)
T 1w5f_A 80 GAGGRPEIGEQAALESEEKIREVLQDTHMVFITAGFGGGTGTGASPVIAKIAKEMGILTVAIVT 143 (353)
T ss_dssp CCTTCHHHHHHHHHHTHHHHHHHTTTCSEEEEEEETTSSHHHHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCChHHHHHHHHHHHHHHHHHHccCCEEEEEeccCCCccccHHHHHHHHHHHhCCcEEEEEe
Confidence 34556654 3334333333322 2333344 5554 35555567888888999999975
No 270
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=31.41 E-value=76 Score=24.16 Aligned_cols=37 Identities=8% Similarity=0.059 Sum_probs=22.3
Q ss_pred CCeEEEEEcCCCC-CCChHHHHHHHHHHHHHHHC--CCeE
Q 045940 3 KFKRVCVFCGSNS-GNRKIFSDAALDLATQLVER--KINL 39 (189)
Q Consensus 3 ~~~~I~V~g~s~~-~~~~~~~~~A~~lg~~la~~--g~~l 39 (189)
.|++|.|+-||-. +.++.-.+.++++.+.+.++ |+.+
T Consensus 3 mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev 42 (211)
T 3p0r_A 3 AMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTV 42 (211)
T ss_dssp -CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEE
T ss_pred ccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeE
Confidence 4567766666543 34555667777777777664 4444
No 271
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=31.33 E-value=46 Score=25.76 Aligned_cols=19 Identities=5% Similarity=0.127 Sum_probs=10.8
Q ss_pred HHHHHHHHHCCCeEEEcCC
Q 045940 26 LDLATQLVERKINLVYGGG 44 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GGg 44 (189)
+++.+.|+++|+.|+.-+.
T Consensus 16 ~~ia~~l~~~G~~V~~~~r 34 (258)
T 3a28_C 16 RGISEKLAADGFDIAVADL 34 (258)
T ss_dssp HHHHHHHHHHTCEEEEEEC
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 3555566666776655443
No 272
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=31.21 E-value=49 Score=25.78 Aligned_cols=19 Identities=16% Similarity=0.211 Sum_probs=9.9
Q ss_pred HHHHHHHHHCCCeEEEcCC
Q 045940 26 LDLATQLVERKINLVYGGG 44 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GGg 44 (189)
+++++.|+++|+.|+.-+.
T Consensus 22 ~aia~~l~~~G~~V~~~~r 40 (265)
T 3lf2_A 22 LATVELLLEAGAAVAFCAR 40 (265)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 3455555556666554433
No 273
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=31.20 E-value=1e+02 Score=20.63 Aligned_cols=34 Identities=26% Similarity=0.300 Sum_probs=20.8
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCe--EEEcCCC
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKIN--LVYGGGS 45 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~--lv~GGg~ 45 (189)
-+.|-|||.+. .++...+..|.+.||. ++-||-.
T Consensus 56 ~~~ivvyC~~G--------~rs~~aa~~L~~~G~~~~~l~GG~~ 91 (110)
T 2k0z_A 56 DKKVLLHCRAG--------RRALDAAKSMHELGYTPYYLEGNVY 91 (110)
T ss_dssp SSCEEEECSSS--------HHHHHHHHHHHHTTCCCEEEESCGG
T ss_pred CCEEEEEeCCC--------chHHHHHHHHHHCCCCEEEecCCHH
Confidence 35678888653 2455666677777763 5556644
No 274
>1zxx_A 6-phosphofructokinase; allosteric regulation, lactobacillus BU transferase; 1.85A {Lactobacillus delbrueckii subsp}
Probab=31.11 E-value=40 Score=28.16 Aligned_cols=53 Identities=21% Similarity=0.213 Sum_probs=36.2
Q ss_pred EEcCCCCCC--ChHHHHHHHHHHHHHHHCCCe-EEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 9 VFCGSNSGN--RKIFSDAALDLATQLVERKIN-LVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 9 V~g~s~~~~--~~~~~~~A~~lg~~la~~g~~-lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
+.|+||..+ +++ .-.++.+.|.+.|+. |++=||. |-|..+.+=+. .+-.+|||
T Consensus 67 ~LGssR~~~~~~~~---~~~~~~~~l~~~~Id~LvvIGGd-gS~~~a~~L~~-~~i~vvgi 122 (319)
T 1zxx_A 67 FLYSARYPEFAEEE---GQLAGIEQLKKHGIDAVVVIGGD-GSYHGALQLTR-HGFNSIGL 122 (319)
T ss_dssp TTCCCCCGGGTSHH---HHHHHHHHHHHTTCCEEEEEECH-HHHHHHHHHHH-TTCCEEEE
T ss_pred ccccCCCCccCCHH---HHHHHHHHHHHhCCCEEEEECCc-hHHHHHHHHHH-hCCCEEEE
Confidence 457776543 222 334666777788765 5566677 99998888664 47899998
No 275
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=31.10 E-value=49 Score=26.27 Aligned_cols=30 Identities=23% Similarity=0.390 Sum_probs=22.5
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 29 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (283)
T 3v8b_A 29 PVALITGAGS-GIGRATALALAADGVTVGAL 58 (283)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 3567888877 88888888777777777665
No 276
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=31.06 E-value=41 Score=26.54 Aligned_cols=30 Identities=20% Similarity=0.282 Sum_probs=26.4
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 5 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 34 (264)
T 3tfo_A 5 KVILITGASG-GIGEGIARELGVAGAKILLG 34 (264)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCcc-HHHHHHHHHHHHCCCEEEEE
Confidence 3579999998 99999999999999988876
No 277
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=31.03 E-value=49 Score=26.35 Aligned_cols=30 Identities=30% Similarity=0.347 Sum_probs=23.1
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 48 k~vlVTGas~-GIG~aia~~la~~G~~V~~~ 77 (291)
T 3ijr_A 48 KNVLITGGDS-GIGRAVSIAFAKEGANIAIA 77 (291)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3568888877 88888888888888777665
No 278
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=30.98 E-value=1.6e+02 Score=22.26 Aligned_cols=17 Identities=18% Similarity=0.182 Sum_probs=8.9
Q ss_pred HHHHHHHHCCCeEEEcC
Q 045940 27 DLATQLVERKINLVYGG 43 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GG 43 (189)
++++.|+++|+.|+.-+
T Consensus 24 ~~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 24 AYAEALAREGAAVVVAD 40 (253)
T ss_dssp HHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHCCCEEEEEc
Confidence 45555555566554433
No 279
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=30.97 E-value=49 Score=26.09 Aligned_cols=29 Identities=31% Similarity=0.606 Sum_probs=17.4
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 31 ~vlVTGas~-gIG~aia~~L~~~G~~V~~~ 59 (276)
T 2b4q_A 31 IALVTGGSR-GIGQMIAQGLLEAGARVFIC 59 (276)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 346666665 66666666666666555554
No 280
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=30.97 E-value=49 Score=25.97 Aligned_cols=28 Identities=39% Similarity=0.534 Sum_probs=13.9
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 14 vlVTGas~-gIG~aia~~l~~~G~~V~~~ 41 (281)
T 3svt_A 14 YLVTGGGS-GIGKGVAAGLVAAGASVMIV 41 (281)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 35555544 55555555555555444443
No 281
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=30.96 E-value=62 Score=25.36 Aligned_cols=37 Identities=0% Similarity=-0.143 Sum_probs=21.4
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYG 42 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~G 42 (189)
-++|+|+.... .++-+.+....+-+.+.++|+.++.-
T Consensus 2 ~~~Igvi~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~~ 38 (313)
T 3m9w_A 2 EVKIGMAIDDL--RLERWQKDRDIFVKKAESLGAKVFVQ 38 (313)
T ss_dssp -CEEEEEESCC--SSSTTHHHHHHHHHHHHHTSCEEEEE
T ss_pred CcEEEEEeCCC--CChHHHHHHHHHHHHHHHcCCEEEEE
Confidence 35677776542 24445555566666666777775553
No 282
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=30.92 E-value=26 Score=28.24 Aligned_cols=45 Identities=9% Similarity=-0.026 Sum_probs=29.6
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
|+++|+|+++...-....--....+..+.+.|......+++....
T Consensus 1 M~~~mkIl~v~~~~~p~~gG~~~~~~~l~~~L~g~~v~v~~~~~~ 45 (394)
T 3okp_A 1 MSASRKTLVVTNDFPPRIGGIQSYLRDFIATQDPESIVVFASTQN 45 (394)
T ss_dssp ---CCCEEEEESCCTTSCSHHHHHHHHHHTTSCGGGEEEEEECSS
T ss_pred CCCCceEEEEeCccCCccchHHHHHHHHHHHhcCCeEEEEECCCC
Confidence 778899999987654333445667778888885566777777655
No 283
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=30.91 E-value=50 Score=25.67 Aligned_cols=25 Identities=20% Similarity=0.335 Sum_probs=10.8
Q ss_pred EEEcCCCCChhHHHHHHHHhcCCeEE
Q 045940 39 LVYGGGSVGLMGLVSQTIFDGGCHVL 64 (189)
Q Consensus 39 lv~GGg~~GlM~a~a~ga~~~gg~vi 64 (189)
|||||+. |+=.++++...+.|.+|+
T Consensus 12 lVTGas~-GIG~aia~~la~~G~~V~ 36 (259)
T 3edm_A 12 VVAGAGR-DIGRACAIRFAQEGANVV 36 (259)
T ss_dssp EEETTTS-HHHHHHHHHHHHTTCEEE
T ss_pred EEECCCc-hHHHHHHHHHHHCCCEEE
Confidence 4444443 444444444444444433
No 284
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=30.90 E-value=50 Score=25.91 Aligned_cols=17 Identities=18% Similarity=0.124 Sum_probs=9.6
Q ss_pred HHHHHHHHHCCCeEEEc
Q 045940 26 LDLATQLVERKINLVYG 42 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~G 42 (189)
+++++.|+++|+.|+.-
T Consensus 24 ~a~a~~l~~~G~~V~~~ 40 (281)
T 3s55_A 24 RSHAVALAEAGADIAIC 40 (281)
T ss_dssp HHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHCCCeEEEE
Confidence 35555566666665543
No 285
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=30.86 E-value=1.8e+02 Score=22.63 Aligned_cols=30 Identities=20% Similarity=0.354 Sum_probs=21.4
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+..
T Consensus 28 k~~lVTGas~-GIG~aia~~la~~G~~Vv~~ 57 (267)
T 3u5t_A 28 KVAIVTGASR-GIGAAIAARLASDGFTVVIN 57 (267)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHHTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4567777776 77777777777777776654
No 286
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=30.85 E-value=50 Score=24.97 Aligned_cols=34 Identities=15% Similarity=0.092 Sum_probs=23.9
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
|++|-|.|+++ -.-+.+++.|+++|+.|+.-+..
T Consensus 1 Mk~vlVTGas~--------gIG~~~a~~l~~~G~~V~~~~r~ 34 (230)
T 3guy_A 1 MSLIVITGASS--------GLGAELAKLYDAEGKATYLTGRS 34 (230)
T ss_dssp --CEEEESTTS--------HHHHHHHHHHHHTTCCEEEEESC
T ss_pred CCEEEEecCCc--------hHHHHHHHHHHHCCCEEEEEeCC
Confidence 56788888875 24457778888999998776654
No 287
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=30.74 E-value=89 Score=25.78 Aligned_cols=39 Identities=15% Similarity=0.202 Sum_probs=30.1
Q ss_pred CCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 3 KFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
+|++|.++... ..-+..-...|++.|+++||.|..=...
T Consensus 11 ~~~~Il~~~~~----~~GHv~p~l~la~~L~~~Gh~V~~~~~~ 49 (424)
T 2iya_A 11 TPRHISFFNIP----GHGHVNPSLGIVQELVARGHRVSYAITD 49 (424)
T ss_dssp CCCEEEEECCS----CHHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred ccceEEEEeCC----CCcccchHHHHHHHHHHCCCeEEEEeCH
Confidence 45788888543 3568888999999999999987665554
No 288
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=30.73 E-value=50 Score=25.86 Aligned_cols=29 Identities=17% Similarity=0.277 Sum_probs=20.6
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 13 ~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 41 (271)
T 3tzq_B 13 VAIITGACG-GIGLETSRVLARAGARVVLA 41 (271)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 457777776 77777777777777776655
No 289
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=30.73 E-value=46 Score=26.02 Aligned_cols=15 Identities=27% Similarity=0.253 Sum_probs=7.7
Q ss_pred HHHHHHHHCCCeEEE
Q 045940 27 DLATQLVERKINLVY 41 (189)
Q Consensus 27 ~lg~~la~~g~~lv~ 41 (189)
.+++.|+++|+.|+.
T Consensus 26 aia~~la~~G~~V~~ 40 (262)
T 3ksu_A 26 LTAKTFALESVNLVL 40 (262)
T ss_dssp HHHHHHTTSSCEEEE
T ss_pred HHHHHHHHCCCEEEE
Confidence 444455555555544
No 290
>3jy6_A Transcriptional regulator, LACI family; NYSGXRC, PSI-II, protein S initiative, structural genomics; 1.97A {Lactobacillus brevis}
Probab=30.71 E-value=1.8e+02 Score=22.11 Aligned_cols=42 Identities=12% Similarity=0.017 Sum_probs=30.9
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
++.++|+|+.... .++-+.+....+-+.+.++|+.++.--..
T Consensus 5 ~~s~~Igvi~~~~--~~~~~~~~~~gi~~~~~~~g~~~~~~~~~ 46 (276)
T 3jy6_A 5 QSSKLIAVIVANI--DDYFSTELFKGISSILESRGYIGVLFDAN 46 (276)
T ss_dssp CCCCEEEEEESCT--TSHHHHHHHHHHHHHHHTTTCEEEEEECT
T ss_pred CCCcEEEEEeCCC--CchHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 4567899998754 36667777778888888899997765433
No 291
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=30.71 E-value=43 Score=25.70 Aligned_cols=28 Identities=11% Similarity=0.210 Sum_probs=15.2
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||.. |+=.++++...+.|.+|+.+
T Consensus 9 vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 36 (246)
T 2ag5_A 9 IILTAAAQ-GIGQAAALAFAREGAKVIAT 36 (246)
T ss_dssp EEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 45555554 55555555555555555444
No 292
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=30.70 E-value=50 Score=25.90 Aligned_cols=9 Identities=11% Similarity=0.191 Sum_probs=5.4
Q ss_pred CHHHHHHHh
Q 045940 171 NARDLLQGM 179 (189)
Q Consensus 171 ~~ee~~~~l 179 (189)
+|||+.+.+
T Consensus 247 ~p~dvA~~v 255 (280)
T 3pgx_A 247 TADEVADVV 255 (280)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 666666554
No 293
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=30.69 E-value=51 Score=25.50 Aligned_cols=33 Identities=15% Similarity=0.173 Sum_probs=21.4
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
++|-|.|+++ -.-+.+.+.|+++|+.|+.-+..
T Consensus 8 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 40 (263)
T 3ai3_A 8 KVAVITGSSS--------GIGLAIAEGFAKEGAHIVLVARQ 40 (263)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEcCC
Confidence 5667777764 23446777778888887765544
No 294
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=30.69 E-value=65 Score=24.26 Aligned_cols=19 Identities=16% Similarity=0.179 Sum_probs=11.2
Q ss_pred CCCcEEEEeCCCCchHHHH
Q 045940 129 HDKPVGVLNVDGYYDSLLR 147 (189)
Q Consensus 129 ~~kPiill~~~g~~~~l~~ 147 (189)
++.++..+.+...+.++..
T Consensus 174 ~gi~v~~v~pg~v~~~~~~ 192 (255)
T 2dkn_A 174 RGVRLNVVAPGAVETPLLQ 192 (255)
T ss_dssp TTCEEEEEEECCBCSHHHH
T ss_pred cCcEEEEEcCCcccchhhh
Confidence 3566766766555665543
No 295
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=30.68 E-value=51 Score=25.57 Aligned_cols=30 Identities=23% Similarity=0.314 Sum_probs=26.3
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
..|||||.. |+=.++++...+.|.+|+.+.
T Consensus 9 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 38 (267)
T 2gdz_A 9 VALVTGAAQ-GIGRAFAEALLLKGAKVALVD 38 (267)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCC-cHHHHHHHHHHHCCCEEEEEE
Confidence 579999988 999999999999998888763
No 296
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=30.63 E-value=2.1e+02 Score=22.99 Aligned_cols=142 Identities=15% Similarity=0.265 Sum_probs=70.8
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCC-eEEEEecCccccccccCCCCceEEec--CCHHHHHHHHH-HhcCeeEEecCCc
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGC-HVLGVIPKALVPIEISGQTVGDVLIV--SDMHERKAEMA-RRADAFIALPGGY 111 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg-~viGv~p~~~~~~e~~~~~~~~~~~~--~~~~~R~~~m~-~~sda~I~lpGG~ 111 (189)
...+|+|+|..|+ ++.+-|+..|. +|+++..... ..+......+..+.. .++.++-..+. ...|.+|-..|+.
T Consensus 166 ~~VlV~GaG~vG~--~~~q~a~~~Ga~~Vi~~~~~~~-~~~~~~~la~~v~~~~~~~~~~~~~~~~~~g~D~vid~~g~~ 242 (343)
T 2dq4_A 166 KSVLITGAGPIGL--MAAMVVRASGAGPILVSDPNPY-RLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNE 242 (343)
T ss_dssp SCEEEECCSHHHH--HHHHHHHHTTCCSEEEECSCHH-HHGGGTTTCSEEECTTTSCHHHHHHHHHSSCEEEEEECSCCH
T ss_pred CEEEEECCCHHHH--HHHHHHHHcCCCEEEEECCCHH-HHHHHHHhHHhccCcCccCHHHHHHHhcCCCCCEEEECCCCH
Confidence 4679999865555 45566777787 8999854321 112222222223322 24433222221 2367888777776
Q ss_pred chHHHHHHHHH----HHhcCCCCCc-------------EEEEeCCC--CchHHHHHHHHHHHcCCCCccc-cCcEEEeCC
Q 045940 112 GTMEELLEMIT----WSQLGIHDKP-------------VGVLNVDG--YYDSLLRFFDKGVEEGFIKSSA-RNIVISAKN 171 (189)
Q Consensus 112 GTL~El~~~~~----~~~~~~~~kP-------------iill~~~g--~~~~l~~~l~~~~~~g~i~~~~-~~~i~~~~~ 171 (189)
-++++....+. +..+|....+ +-+.+... ..+.+.+ +-+++++|-++.+. ....+-.++
T Consensus 243 ~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~-~~~l~~~g~~~~~~~i~~~~~l~~ 321 (343)
T 2dq4_A 243 AAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQ-GTALVYSGRVDLSPLLTHRLPLSR 321 (343)
T ss_dssp HHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHH-HHHHHHHTSSCCGGGEEEEEEGGG
T ss_pred HHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHH-HHHHHHcCCCChHHheeEEecHHH
Confidence 67666655442 0111211111 11222211 2233333 33456667654332 234556788
Q ss_pred HHHHHHHhhc
Q 045940 172 ARDLLQGMEV 181 (189)
Q Consensus 172 ~ee~~~~l~~ 181 (189)
.+|+++.+++
T Consensus 322 ~~~A~~~~~~ 331 (343)
T 2dq4_A 322 YREAFGLLAS 331 (343)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHhc
Confidence 8888888764
No 297
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=30.61 E-value=58 Score=26.36 Aligned_cols=56 Identities=20% Similarity=0.246 Sum_probs=32.0
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCC--eEEEEec
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGC--HVLGVIP 68 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg--~viGv~p 68 (189)
++|.|-|+++- ..+++++.|+++|+.|+.-+....-.+.+.+.....+. .+..+..
T Consensus 9 k~vlVTGas~g--------IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~ 66 (319)
T 3ioy_A 9 RTAFVTGGANG--------VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQL 66 (319)
T ss_dssp CEEEEETTTST--------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEEC
T ss_pred CEEEEcCCchH--------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEEC
Confidence 46777777752 44567778888899887665552222333332223333 5665543
No 298
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=30.59 E-value=37 Score=26.00 Aligned_cols=28 Identities=21% Similarity=0.383 Sum_probs=14.9
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||.. |+=.++++...+.|.+|+.+
T Consensus 17 vlVTGas~-gIG~~~a~~l~~~G~~V~~~ 44 (249)
T 3f9i_A 17 SLITGASS-GIGSAIARLLHKLGSKVIIS 44 (249)
T ss_dssp EEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 45555554 55555555555555555444
No 299
>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A
Probab=30.56 E-value=54 Score=25.70 Aligned_cols=36 Identities=25% Similarity=0.212 Sum_probs=21.3
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCC-CeEEEcCC
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERK-INLVYGGG 44 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g-~~lv~GGg 44 (189)
|+..++|.|.|++. ..-+.+.+.|.++| +.|+.-..
T Consensus 2 M~~~~~ilVtGatG--------~iG~~l~~~L~~~g~~~V~~~~R 38 (299)
T 2wm3_A 2 MVDKKLVVVFGGTG--------AQGGSVARTLLEDGTFKVRVVTR 38 (299)
T ss_dssp --CCCEEEEETTTS--------HHHHHHHHHHHHHCSSEEEEEES
T ss_pred CCCCCEEEEECCCc--------hHHHHHHHHHHhcCCceEEEEEc
Confidence 44457788888764 23445666666667 77665443
No 300
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=30.55 E-value=39 Score=25.97 Aligned_cols=16 Identities=13% Similarity=0.121 Sum_probs=10.5
Q ss_pred HHHHHHHHCCCeEEEc
Q 045940 27 DLATQLVERKINLVYG 42 (189)
Q Consensus 27 ~lg~~la~~g~~lv~G 42 (189)
++.+.|+++|+.|+.-
T Consensus 16 ~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 16 AAVEALTQDGYTVVCH 31 (244)
T ss_dssp HHHHHHHHTTCEEEEC
T ss_pred HHHHHHHHCCCEEEEe
Confidence 5566667777776654
No 301
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=30.55 E-value=1.9e+02 Score=22.49 Aligned_cols=55 Identities=16% Similarity=0.179 Sum_probs=35.1
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
++|-|-|+++ -.-+.+++.|+++|+.|+.-+.. ---+...+...+.++.+..+.-
T Consensus 32 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~ 86 (273)
T 3uf0_A 32 RTAVVTGAGS--------GIGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVVA 86 (273)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEEC
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEEe
Confidence 4666777764 24457788888999998766554 4344455555556777766643
No 302
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=30.53 E-value=28 Score=31.05 Aligned_cols=44 Identities=27% Similarity=0.330 Sum_probs=34.1
Q ss_pred HHHHHHHHHHHHHCCCeEEEcCCC----------CChhHHHHHHHHhcCCeEEE
Q 045940 22 SDAALDLATQLVERKINLVYGGGS----------VGLMGLVSQTIFDGGCHVLG 65 (189)
Q Consensus 22 ~~~A~~lg~~la~~g~~lv~GGg~----------~GlM~a~a~ga~~~gg~viG 65 (189)
.+-|+.|++.|.++|+.||+||-. .|+-+..++-+++.-|.++-
T Consensus 341 v~NAkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItvN 394 (490)
T 3ou5_A 341 LKNARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITAN 394 (490)
T ss_dssp HHHHHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEECE
T ss_pred HHHHHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEEC
Confidence 345778899999999999998743 47778888888887766554
No 303
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=30.44 E-value=52 Score=25.46 Aligned_cols=16 Identities=13% Similarity=0.137 Sum_probs=8.3
Q ss_pred HHHHHHHHCCCeEEEc
Q 045940 27 DLATQLVERKINLVYG 42 (189)
Q Consensus 27 ~lg~~la~~g~~lv~G 42 (189)
++.+.|+++|+.|+.-
T Consensus 27 ~ia~~l~~~G~~V~~~ 42 (263)
T 3ak4_A 27 AIARALDKAGATVAIA 42 (263)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCCCEEEEE
Confidence 4445555556655543
No 304
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=30.44 E-value=1.1e+02 Score=23.09 Aligned_cols=58 Identities=14% Similarity=0.019 Sum_probs=0.0
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHH-CCCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVE-RKINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~-~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
|.+.++|.|.|+++ -..+.+.+.|++ +|+.|+.-+...--.+...+...+.+.++.-+
T Consensus 1 ~~~~k~vlITGasg--------gIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 59 (276)
T 1wma_A 1 SSGIHVALVTGGNK--------GIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFH 59 (276)
T ss_dssp -CCCCEEEESSCSS--------HHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEE
T ss_pred CCCCCEEEEeCCCc--------HHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEE
No 305
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=30.43 E-value=46 Score=26.20 Aligned_cols=27 Identities=30% Similarity=0.630 Sum_probs=12.2
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLG 65 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viG 65 (189)
.|||||+. |+=.++++.-.+.|.+|+.
T Consensus 30 ~lVTGas~-GIG~aia~~l~~~G~~V~~ 56 (277)
T 4fc7_A 30 AFITGGGS-GIGFRIAEIFMRHGCHTVI 56 (277)
T ss_dssp EEEETTTS-HHHHHHHHHHHTTTCEEEE
T ss_pred EEEeCCCc-hHHHHHHHHHHHCCCEEEE
Confidence 34444444 4444444444444444433
No 306
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=30.40 E-value=39 Score=23.72 Aligned_cols=66 Identities=20% Similarity=0.200 Sum_probs=39.1
Q ss_pred HhcCeeEEecCCcch-----HHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHH
Q 045940 99 RRADAFIALPGGYGT-----MEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNAR 173 (189)
Q Consensus 99 ~~sda~I~lpGG~GT-----L~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~e 173 (189)
+.||++|+|.|-.-+ -.|+-.++ ..+||++.+...|--+ +..-+++ ...-.+--+.+
T Consensus 37 ~~~~~vIvL~G~~t~~s~wv~~EI~~A~------~~gkpIigV~~~g~~~-~P~~l~~-----------~a~~iV~Wn~~ 98 (111)
T 1eiw_A 37 EDADAVIVLAGLWGTRRDEILGAVDLAR------KSSKPIITVRPYGLEN-VPPELEA-----------VSSEVVGWNPH 98 (111)
T ss_dssp SSCSEEEEEGGGTTTSHHHHHHHHHHHT------TTTCCEEEECCSSSSC-CCTTHHH-----------HCSEEECSCHH
T ss_pred ccCCEEEEEeCCCcCCChHHHHHHHHHH------HcCCCEEEEEcCCCCc-CCHHHHh-----------hCceeccCCHH
Confidence 568888888886543 34444444 5899999998765311 1111111 02234556778
Q ss_pred HHHHHhhcC
Q 045940 174 DLLQGMEVP 182 (189)
Q Consensus 174 e~~~~l~~~ 182 (189)
.+.+.|.+.
T Consensus 99 ~I~~aI~~~ 107 (111)
T 1eiw_A 99 CIRDALEDA 107 (111)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHhc
Confidence 888887664
No 307
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=30.39 E-value=52 Score=25.44 Aligned_cols=33 Identities=12% Similarity=0.068 Sum_probs=20.7
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
++|-|.|+++ -.-+++.+.|+++|+.|+.-+..
T Consensus 10 k~vlVTGas~--------giG~~ia~~l~~~G~~V~~~~r~ 42 (260)
T 2ae2_A 10 CTALVTGGSR--------GIGYGIVEELASLGASVYTCSRN 42 (260)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4666777664 23446667777788887655443
No 308
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=30.37 E-value=51 Score=26.05 Aligned_cols=29 Identities=28% Similarity=0.453 Sum_probs=20.1
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 29 ~vlVTGas~-GIG~aia~~l~~~G~~V~~~ 57 (277)
T 4dqx_A 29 VCIVTGGGS-GIGRATAELFAKNGAYVVVA 57 (277)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 457777776 77777777777777766655
No 309
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=30.37 E-value=1.3e+02 Score=23.28 Aligned_cols=31 Identities=16% Similarity=0.265 Sum_probs=26.6
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||+. |+=.++++...+.|.+|+.+-
T Consensus 12 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~ 42 (264)
T 3ucx_A 12 KVVVISGVGP-ALGTTLARRCAEQGADLVLAA 42 (264)
T ss_dssp CEEEEESCCT-THHHHHHHHHHHTTCEEEEEE
T ss_pred cEEEEECCCc-HHHHHHHHHHHHCcCEEEEEe
Confidence 3579999998 999999999999998887763
No 310
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=30.31 E-value=48 Score=25.64 Aligned_cols=9 Identities=0% Similarity=0.161 Sum_probs=5.4
Q ss_pred CHHHHHHHh
Q 045940 171 NARDLLQGM 179 (189)
Q Consensus 171 ~~ee~~~~l 179 (189)
+|||+.+.+
T Consensus 214 ~~~dvA~~i 222 (249)
T 1o5i_A 214 KPEEIASVV 222 (249)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 566666554
No 311
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=30.17 E-value=1.8e+02 Score=22.56 Aligned_cols=33 Identities=12% Similarity=0.163 Sum_probs=18.4
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
++|-|.|+++ -.-+.+.+.|+++|+.|+.-+..
T Consensus 23 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 55 (277)
T 2rhc_B 23 EVALVTGATS--------GIGLEIARRLGKEGLRVFVCARG 55 (277)
T ss_dssp CEEEEETCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4556666553 23335666666777776654433
No 312
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=30.16 E-value=62 Score=26.45 Aligned_cols=29 Identities=17% Similarity=0.331 Sum_probs=21.5
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
||+|.|.||. +..+++.+...+.|+.++.
T Consensus 1 MK~I~ilGgg---------~~g~~~~~~Ak~~G~~vv~ 29 (363)
T 4ffl_A 1 MKTICLVGGK---------LQGFEAAYLSKKAGMKVVL 29 (363)
T ss_dssp CCEEEEECCS---------HHHHHHHHHHHHTTCEEEE
T ss_pred CCEEEEECCC---------HHHHHHHHHHHHCCCEEEE
Confidence 7899999986 3455666666778988664
No 313
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=30.15 E-value=1.6e+02 Score=23.07 Aligned_cols=29 Identities=21% Similarity=0.291 Sum_probs=19.4
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 34 ~~lVTGas~-GIG~aia~~la~~G~~V~~~ 62 (276)
T 3r1i_A 34 RALITGAST-GIGKKVALAYAEAGAQVAVA 62 (276)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 456777766 77777777666666666655
No 314
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=30.15 E-value=53 Score=25.39 Aligned_cols=16 Identities=6% Similarity=0.057 Sum_probs=8.3
Q ss_pred HHHHHHHHCCCeEEEc
Q 045940 27 DLATQLVERKINLVYG 42 (189)
Q Consensus 27 ~lg~~la~~g~~lv~G 42 (189)
++.+.|+++|+.|+.-
T Consensus 21 ~ia~~l~~~G~~V~~~ 36 (256)
T 2d1y_A 21 AIAQAFAREGALVALC 36 (256)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCCCEEEEE
Confidence 4455555556555443
No 315
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=30.10 E-value=1.5e+02 Score=24.29 Aligned_cols=82 Identities=11% Similarity=0.111 Sum_probs=45.3
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccC-CCCceEEec--CCHHHHHHHHH-HhcCeeEEecCCcc
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISG-QTVGDVLIV--SDMHERKAEMA-RRADAFIALPGGYG 112 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~-~~~~~~~~~--~~~~~R~~~m~-~~sda~I~lpGG~G 112 (189)
..+|+|++. ++=-++.+-|+..|.+|+++. . ....+... -..+..+.. .++.++-..+. ...|.++=.-|+.-
T Consensus 167 ~VlV~Ga~G-~vG~~a~qla~~~Ga~Vi~~~-~-~~~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~ 243 (371)
T 3gqv_A 167 YVLVYGGST-ATATVTMQMLRLSGYIPIATC-S-PHNFDLAKSRGAEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVE 243 (371)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEEE-C-GGGHHHHHHTTCSEEEETTSTTHHHHHHHHTTTCCCEEEESSCSHH
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEEe-C-HHHHHHHHHcCCcEEEECCCchHHHHHHHHccCCccEEEECCCchH
Confidence 358888854 555556777788899999884 2 11112111 112334433 23433222221 12688888888877
Q ss_pred hHHHHHHHH
Q 045940 113 TMEELLEMI 121 (189)
Q Consensus 113 TL~El~~~~ 121 (189)
|++..+..+
T Consensus 244 ~~~~~~~~l 252 (371)
T 3gqv_A 244 STTFCFAAI 252 (371)
T ss_dssp HHHHHHHHS
T ss_pred HHHHHHHHh
Confidence 777665554
No 316
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=30.01 E-value=49 Score=26.22 Aligned_cols=29 Identities=38% Similarity=0.713 Sum_probs=21.5
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 31 ~vlVTGas~-gIG~aia~~la~~G~~V~~~ 59 (277)
T 3gvc_A 31 VAIVTGAGA-GIGLAVARRLADEGCHVLCA 59 (277)
T ss_dssp EEEETTTTS-THHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 467778776 77777787777777777665
No 317
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=30.00 E-value=47 Score=26.26 Aligned_cols=29 Identities=14% Similarity=0.229 Sum_probs=17.2
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 23 ~vlVTGas~-gIG~aia~~La~~G~~V~~~ 51 (272)
T 2nwq_A 23 TLFITGATS-GFGEACARRFAEAGWSLVLT 51 (272)
T ss_dssp EEEESSTTT-SSHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 456666655 66666666666666555544
No 318
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=29.99 E-value=53 Score=25.79 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=15.5
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 9 ~lVTGas~-GIG~aia~~la~~G~~V~~~ 36 (274)
T 3e03_A 9 LFITGASR-GIGLAIALRAARDGANVAIA 36 (274)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 45555555 55555555555555555444
No 319
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=29.96 E-value=18 Score=28.36 Aligned_cols=81 Identities=14% Similarity=-0.015 Sum_probs=49.4
Q ss_pred HhcCeeEEecCCcchHHHHHHHHH-----H---HhcCCCCCcEEEEe--CCCCchHHHHHHHHHHHcCCC--Ccccc-C-
Q 045940 99 RRADAFIALPGGYGTMEELLEMIT-----W---SQLGIHDKPVGVLN--VDGYYDSLLRFFDKGVEEGFI--KSSAR-N- 164 (189)
Q Consensus 99 ~~sda~I~lpGG~GTL~El~~~~~-----~---~~~~~~~kPiill~--~~g~~~~l~~~l~~~~~~g~i--~~~~~-~- 164 (189)
..+|++||.|-..+|+.-+..=++ . ..+ ..++|+++.- ....|... +-+..+.+.|.+ .+... .
T Consensus 83 ~~aD~mvIaPaTanTlAKiA~GiaDnLlt~aa~~~L-~~~~plvlaPamn~~m~~h~-~Nm~~L~~~G~~ii~P~~~lac 160 (207)
T 3mcu_A 83 IPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATL-RNGKPVVLAVSTNDALGLNG-VNLMRLMATKNIYFVPFGQDAP 160 (207)
T ss_dssp SCCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHHH-HTTCCEEEEEEETTTTTTTH-HHHHHHHHBTTEEECCEEESCT
T ss_pred hhcCEEEEecCCHHHHHHHHccccCcHHHHHHHHHH-hcCCCEEEEECCChhHHHHH-HHHHHHHHCCCEEECCCCccCC
Confidence 568999999999999987753211 0 111 2579999772 23589884 446667777743 33210 0
Q ss_pred ---cEEEeCCHHHHHHHhhc
Q 045940 165 ---IVISAKNARDLLQGMEV 181 (189)
Q Consensus 165 ---~i~~~~~~ee~~~~l~~ 181 (189)
----..+++++++.+++
T Consensus 161 g~~g~g~mae~~~I~~~i~~ 180 (207)
T 3mcu_A 161 EKKPNSMVARMELLEDTVLE 180 (207)
T ss_dssp TTSTTCEEECGGGHHHHHHH
T ss_pred CCcCCcCCCCHHHHHHHHHH
Confidence 01224577777777654
No 320
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=29.93 E-value=53 Score=25.70 Aligned_cols=29 Identities=34% Similarity=0.559 Sum_probs=16.5
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|-+|+.+
T Consensus 23 ~~lVTGas~-gIG~~ia~~l~~~G~~V~~~ 51 (267)
T 1vl8_A 23 VALVTGGSR-GLGFGIAQGLAEAGCSVVVA 51 (267)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 346666655 66666666555555555544
No 321
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=29.86 E-value=53 Score=25.75 Aligned_cols=16 Identities=13% Similarity=0.202 Sum_probs=8.2
Q ss_pred HHHHHHHHCCCeEEEc
Q 045940 27 DLATQLVERKINLVYG 42 (189)
Q Consensus 27 ~lg~~la~~g~~lv~G 42 (189)
.+.+.|+++|+.|+.-
T Consensus 24 ~ia~~l~~~G~~V~~~ 39 (270)
T 1yde_A 24 GIVRAFVNSGARVVIC 39 (270)
T ss_dssp HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHCCCEEEEE
Confidence 4445555556555443
No 322
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=29.83 E-value=45 Score=26.08 Aligned_cols=31 Identities=16% Similarity=0.259 Sum_probs=26.9
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||+. |+=.++++...+.|.+|+.+-
T Consensus 29 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~ 59 (260)
T 3un1_A 29 KVVVITGASQ-GIGAGLVRAYRDRNYRVVATS 59 (260)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 4679999988 999999999999999988773
No 323
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=29.77 E-value=1.6e+02 Score=23.19 Aligned_cols=55 Identities=11% Similarity=0.059 Sum_probs=33.7
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
++|-|-|+++ -.-+++++.|+++|+.|+.-+...--.+.+.+...+.++++..+.
T Consensus 29 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 83 (283)
T 3v8b_A 29 PVALITGAGS--------GIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALE 83 (283)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 4566777764 244577888889999988766552223333333334566766664
No 324
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=29.75 E-value=1.7e+02 Score=23.07 Aligned_cols=55 Identities=20% Similarity=0.247 Sum_probs=27.1
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
++|-|.|+++ -.-+++++.|+++|+.|+.-+...---+.+.+...+.+..+..+.
T Consensus 32 k~vlVTGas~--------gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 86 (301)
T 3tjr_A 32 RAAVVTGGAS--------GIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86 (301)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEE
Confidence 3556666553 233456666677777766555442222222222233355555543
No 325
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=29.58 E-value=70 Score=24.25 Aligned_cols=38 Identities=18% Similarity=0.304 Sum_probs=24.0
Q ss_pred HHHHh-cCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 96 EMARR-ADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 96 ~m~~~-sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
++... .|++|+.|-......+....+. ..+.|+++++.
T Consensus 54 l~~~~~vdgii~~~~~~~~~~~~~~~~~-----~~~ipvV~~~~ 92 (276)
T 3ksm_A 54 HLSQAPPDALILAPNSAEDLTPSVAQYR-----ARNIPVLVVDS 92 (276)
T ss_dssp HHHHSCCSEEEECCSSTTTTHHHHHHHH-----HTTCCEEEESS
T ss_pred HHHhCCCCEEEEeCCCHHHHHHHHHHHH-----HCCCcEEEEec
Confidence 33445 7999998865544455544442 25788888864
No 326
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=29.56 E-value=42 Score=25.57 Aligned_cols=29 Identities=21% Similarity=0.306 Sum_probs=21.2
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|-+|+.+
T Consensus 16 ~vlITGas~-gIG~~ia~~l~~~G~~V~~~ 44 (247)
T 3i1j_A 16 VILVTGAAR-GIGAAAARAYAAHGASVVLL 44 (247)
T ss_dssp EEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 557777776 77777777777777776665
No 327
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=29.56 E-value=42 Score=26.43 Aligned_cols=29 Identities=21% Similarity=0.442 Sum_probs=16.4
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 30 ~~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (270)
T 3ftp_A 30 VAIVTGASR-GIGRAIALELARRGAMVIGT 58 (270)
T ss_dssp EEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 345566555 66556666555555555544
No 328
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=29.55 E-value=86 Score=24.86 Aligned_cols=9 Identities=0% Similarity=-0.112 Sum_probs=4.1
Q ss_pred CeEEEEEcC
Q 045940 4 FKRVCVFCG 12 (189)
Q Consensus 4 ~~~I~V~g~ 12 (189)
|++|+|.|.
T Consensus 3 MmkI~ViGa 11 (243)
T 3qy9_A 3 SMKILLIGY 11 (243)
T ss_dssp CCEEEEECC
T ss_pred ceEEEEECc
Confidence 344454443
No 329
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=29.55 E-value=46 Score=25.78 Aligned_cols=17 Identities=24% Similarity=0.303 Sum_probs=9.4
Q ss_pred HHHHHHHHCCCeEEEcC
Q 045940 27 DLATQLVERKINLVYGG 43 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GG 43 (189)
.+++.|+++|+.|+.-+
T Consensus 20 ~ia~~l~~~G~~V~~~~ 36 (260)
T 2qq5_A 20 GIALQLCKAGATVYITG 36 (260)
T ss_dssp HHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHCCCEEEEEe
Confidence 45555566666655443
No 330
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=29.53 E-value=55 Score=25.61 Aligned_cols=26 Identities=23% Similarity=0.325 Sum_probs=11.3
Q ss_pred EEEcCCCCChhHHHHHHHHhcCCeEEE
Q 045940 39 LVYGGGSVGLMGLVSQTIFDGGCHVLG 65 (189)
Q Consensus 39 lv~GGg~~GlM~a~a~ga~~~gg~viG 65 (189)
|||||+. |+=.++++...+.|-+|+.
T Consensus 10 lITGas~-gIG~aia~~l~~~G~~V~~ 35 (263)
T 2a4k_A 10 LVTGAAS-GIGRAALDLFAREGASLVA 35 (263)
T ss_dssp EEESTTS-HHHHHHHHHHHHTTCEEEE
T ss_pred EEECCCC-HHHHHHHHHHHHCCCEEEE
Confidence 4444443 4444444444444444333
No 331
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=29.51 E-value=43 Score=26.21 Aligned_cols=27 Identities=30% Similarity=0.495 Sum_probs=12.5
Q ss_pred EEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 39 LVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 39 lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
|||||.. |+=.++++...+.|-+|+.+
T Consensus 9 lVTGas~-gIG~~~a~~l~~~G~~V~~~ 35 (281)
T 3m1a_A 9 LVTGASS-GFGRAIAEAAVAAGDTVIGT 35 (281)
T ss_dssp EETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 4444444 44444444444444444443
No 332
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=29.42 E-value=57 Score=24.43 Aligned_cols=30 Identities=20% Similarity=0.161 Sum_probs=21.3
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHH
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQ 31 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~ 31 (189)
.+|++|+|++|+=++...-+...+++.-+.
T Consensus 4 ~~m~~~~v~~GsFdp~H~GH~~l~~~a~~~ 33 (194)
T 1kam_A 4 GGSKKIGIFGGTFDPPHNGHLLMANEVLYQ 33 (194)
T ss_dssp --CCEEEEEEECCSSCCHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEeccccccHHHHHHHHHHHHH
Confidence 446789999999888887777766655443
No 333
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=29.38 E-value=39 Score=26.87 Aligned_cols=48 Identities=23% Similarity=0.336 Sum_probs=28.4
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC--CCCc-----hHHHHHHHHHHH
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV--DGYY-----DSLLRFFDKGVE 154 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~--~g~~-----~~l~~~l~~~~~ 154 (189)
..|.+ +.-||=||+.+....+. . .+|++-+|. -||. +++.+.++.+.+
T Consensus 41 ~~D~v-v~~GGDGTll~~a~~~~-----~-~~PilGIn~G~~Gfl~~~~~~~~~~al~~i~~ 95 (258)
T 1yt5_A 41 TADLI-VVVGGDGTVLKAAKKAA-----D-GTPMVGFKAGRLGFLTSYTLDEIDRFLEDLRN 95 (258)
T ss_dssp CCSEE-EEEECHHHHHHHHTTBC-----T-TCEEEEEESSSCCSSCCBCGGGHHHHHHHHHT
T ss_pred CCCEE-EEEeCcHHHHHHHHHhC-----C-CCCEEEEECCCCCccCcCCHHHHHHHHHHHHc
Confidence 35655 45578999988765442 3 789776663 3554 344445555443
No 334
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=29.36 E-value=57 Score=27.54 Aligned_cols=70 Identities=17% Similarity=0.059 Sum_probs=42.9
Q ss_pred HHHHHHHHHhcCeeEEec--CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEE
Q 045940 91 HERKAEMARRADAFIALP--GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVIS 168 (189)
Q Consensus 91 ~~R~~~m~~~sda~I~lp--GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~ 168 (189)
.+....+...||+||... -++|.. ++|+++ .++|||. +..|.. ++ ++. .....+.-
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~--~lEAmA------~G~PVV~-~~~g~~-e~-------v~~-----~~~G~lv~ 362 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYP--PLEMAH------FGLRVIT-NKYENK-DL-------SNW-----HSNIVSLE 362 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSH--HHHHHH------TTCEEEE-ECBTTB-CG-------GGT-----BTTEEEES
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcH--HHHHHh------CCCcEEE-eCCCcc-hh-------hhc-----CCCEEEeC
Confidence 344556678999998754 367764 577775 7999997 555532 21 111 11122233
Q ss_pred eCCHHHHHHHhhcC
Q 045940 169 AKNARDLLQGMEVP 182 (189)
Q Consensus 169 ~~~~ee~~~~l~~~ 182 (189)
..|++++.+.|.+.
T Consensus 363 ~~d~~~la~ai~~l 376 (413)
T 2x0d_A 363 QLNPENIAETLVEL 376 (413)
T ss_dssp SCSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHH
Confidence 46888888877654
No 335
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=29.32 E-value=56 Score=25.27 Aligned_cols=19 Identities=16% Similarity=0.100 Sum_probs=10.5
Q ss_pred HHHHHHHHHCCCeEEEcCC
Q 045940 26 LDLATQLVERKINLVYGGG 44 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GGg 44 (189)
+++.+.|+++|+.|+.-+.
T Consensus 21 ~~ia~~l~~~G~~V~~~~r 39 (260)
T 2z1n_A 21 FASALELARNGARLLLFSR 39 (260)
T ss_dssp HHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHCCCEEEEEeC
Confidence 3555556666666554433
No 336
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=29.30 E-value=51 Score=27.55 Aligned_cols=44 Identities=16% Similarity=0.032 Sum_probs=23.4
Q ss_pred HHHHHHHHhcCeeEEe--cCCcchHHHHHHHH-HHHhcCCCCCcEEEEe
Q 045940 92 ERKAEMARRADAFIAL--PGGYGTMEELLEMI-TWSQLGIHDKPVGVLN 137 (189)
Q Consensus 92 ~R~~~m~~~sda~I~l--pGG~GTL~El~~~~-~~~~~~~~~kPiill~ 137 (189)
+....+...||++|.- ..|+|.. +.|++ -+...=..++|||..+
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~--~lEAm~Kl~eYla~G~PVIas~ 322 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVY--LADSSMKLLQYDFFGLPAVCPN 322 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTT--HHHHCHHHHHHHHHTCCEEEEG
T ss_pred HHHHHHHHhcCEEEECCCcccCchH--HHHHHHHHHHHhhCCCcEEEeh
Confidence 4445667899988753 2445442 23333 0000001589999765
No 337
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=29.26 E-value=99 Score=24.44 Aligned_cols=35 Identities=14% Similarity=-0.042 Sum_probs=20.8
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeE
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINL 39 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~l 39 (189)
+++|.|+.||... +..-.+.|+.+.+.+.+.|+.+
T Consensus 34 ~mkIliI~GS~r~-~s~t~~La~~~~~~l~~~g~ev 68 (247)
T 2q62_A 34 RPRILILYGSLRT-VSYSRLLAEEARRLLEFFGAEV 68 (247)
T ss_dssp CCEEEEEECCCCS-SCHHHHHHHHHHHHHHHTTCEE
T ss_pred CCeEEEEEccCCC-CCHHHHHHHHHHHHHhhCCCEE
Confidence 4455555444332 3445677777888777766654
No 338
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=29.21 E-value=55 Score=25.84 Aligned_cols=28 Identities=21% Similarity=0.373 Sum_probs=14.1
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||.. |+=.++++.-.+.|.+|+.+
T Consensus 19 vlVTGas~-gIG~~~a~~L~~~G~~V~~~ 46 (291)
T 3rd5_A 19 VVITGANS-GLGAVTARELARRGATVIMA 46 (291)
T ss_dssp EEEECCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 35555544 55555555555555444444
No 339
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=29.18 E-value=55 Score=25.83 Aligned_cols=55 Identities=16% Similarity=0.158 Sum_probs=36.0
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
++|-|-|+++ -.-+++++.|+++|+.|+.-+....--+.+.+...+.++++..+.
T Consensus 33 k~~lVTGas~--------GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 87 (276)
T 3r1i_A 33 KRALITGAST--------GIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIR 87 (276)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEE
T ss_pred CEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEE
Confidence 5667777764 234578888899999987766553444555555555677766664
No 340
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=29.14 E-value=58 Score=26.63 Aligned_cols=54 Identities=15% Similarity=0.217 Sum_probs=36.4
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE----------------EcCCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLV----------------YGGGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv----------------~GGg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
++|+|++.... + ++++.++|.++|+.++ +=||. |.|-.+++-.... -.++||-.
T Consensus 30 mki~iv~~~~~---~-----~~~l~~~L~~~g~~v~~~~~~~~~~~~~DlvIvlGGD-GT~L~aa~~~~~~-~PilGIN~ 99 (278)
T 1z0s_A 30 MRAAVVYKTDG---H-----VKRIEEALKRLEVEVELFNQPSEELENFDFIVSVGGD-GTILRILQKLKRC-PPIFGINT 99 (278)
T ss_dssp CEEEEEESSST---T-----HHHHHHHHHHTTCEEEEESSCCGGGGGSSEEEEEECH-HHHHHHHTTCSSC-CCEEEEEC
T ss_pred eEEEEEeCCcH---H-----HHHHHHHHHHCCCEEEEccccccccCCCCEEEEECCC-HHHHHHHHHhCCC-CcEEEECC
Confidence 35999986543 2 7788888888876542 23346 8887776665555 78999943
No 341
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=29.06 E-value=1e+02 Score=23.28 Aligned_cols=28 Identities=11% Similarity=0.106 Sum_probs=19.5
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHH
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLAT 30 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~ 30 (189)
++|++|.++.||... ++.-.+.++.+.+
T Consensus 9 ~~~~~il~i~GS~r~-~S~t~~La~~~~~ 36 (191)
T 3k1y_A 9 SHMRTLAVISAGLST-PSSTRQIADSISE 36 (191)
T ss_dssp CCSEEEEEEECCCSS-SCHHHHHHHHHHH
T ss_pred hhhceEEEEECCCCC-CCHHHHHHHHHHH
Confidence 678999999888654 4444566666666
No 342
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=29.04 E-value=1.6e+02 Score=23.22 Aligned_cols=30 Identities=27% Similarity=0.401 Sum_probs=26.2
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.+.++...+.|.+|+.+
T Consensus 8 KvalVTGas~-GIG~aiA~~la~~Ga~Vv~~ 37 (254)
T 4fn4_A 8 KVVIVTGAGS-GIGRAIAKKFALNDSIVVAV 37 (254)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHcCCEEEEE
Confidence 4579999998 99999999999999988766
No 343
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=29.03 E-value=37 Score=28.47 Aligned_cols=39 Identities=23% Similarity=0.299 Sum_probs=26.3
Q ss_pred CCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 3 KFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
+.++|+|.+|......+.=...|..+.+.|-+.+|.++.
T Consensus 9 ~~~~v~vl~GG~S~E~~vS~~sa~~v~~~l~~~~~~v~~ 47 (373)
T 3lwb_A 9 RRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVIA 47 (373)
T ss_dssp TCEEEEEEEEC-----CHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CCcEEEEEecCCCCChhhHHHHHHHHHHHhhhcCceEEE
Confidence 345778777666556677789999999999888887654
No 344
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=29.03 E-value=57 Score=25.15 Aligned_cols=54 Identities=19% Similarity=0.166 Sum_probs=28.5
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
++|-|.|+++ -.-+++.+.|+++|+.|+.-+...--.+.+.+...+.++++..+
T Consensus 3 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 56 (256)
T 1geg_A 3 KVALVTGAGQ--------GIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAV 56 (256)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 4566666654 23446777778888887765444122222333223335555555
No 345
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=29.00 E-value=44 Score=26.04 Aligned_cols=29 Identities=14% Similarity=0.250 Sum_probs=15.8
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 13 ~~lVTGas~-gIG~~ia~~l~~~G~~V~~~ 41 (276)
T 1mxh_A 13 AAVITGGAR-RIGHSIAVRLHQQGFRVVVH 41 (276)
T ss_dssp EEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 345555555 55555555555555555544
No 346
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=28.99 E-value=48 Score=25.63 Aligned_cols=29 Identities=21% Similarity=0.345 Sum_probs=15.7
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|.+|+.+
T Consensus 16 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 44 (260)
T 2zat_A 16 VALVTASTD-GIGLAIARRLAQDGAHVVVS 44 (260)
T ss_dssp EEEESSCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 345555555 55555555555555555444
No 347
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=28.99 E-value=52 Score=25.21 Aligned_cols=9 Identities=11% Similarity=0.276 Sum_probs=5.5
Q ss_pred CHHHHHHHh
Q 045940 171 NARDLLQGM 179 (189)
Q Consensus 171 ~~ee~~~~l 179 (189)
+|+|+.+.+
T Consensus 225 ~~~dva~~~ 233 (264)
T 2pd6_A 225 DPEDVADVV 233 (264)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 566666655
No 348
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=28.99 E-value=56 Score=25.68 Aligned_cols=30 Identities=23% Similarity=0.302 Sum_probs=26.3
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||.. |+=.++++...+.|-+|+.+
T Consensus 23 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 52 (277)
T 2rhc_B 23 EVALVTGATS-GIGLEIARRLGKEGLRVFVC 52 (277)
T ss_dssp CEEEEETCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4679999988 99999999999999888876
No 349
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=28.98 E-value=75 Score=24.21 Aligned_cols=33 Identities=6% Similarity=-0.123 Sum_probs=23.3
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGG 44 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg 44 (189)
|++|.|-|+++ -.-+++.+.|+++|+.|+.-+.
T Consensus 1 mk~vlVTGas~--------gIG~~~a~~l~~~G~~V~~~~r 33 (257)
T 1fjh_A 1 MSIIVISGCAT--------GIGAATRKVLEAAGHQIVGIDI 33 (257)
T ss_dssp CCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred CCEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 46788888775 2345677788889999776443
No 350
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=28.93 E-value=96 Score=29.17 Aligned_cols=46 Identities=22% Similarity=0.182 Sum_probs=37.7
Q ss_pred HHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 21 FSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 21 ~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
+-.-+.-+...|+..||.++++|.. =-.+.+++.|.+.+..+||+.
T Consensus 617 HdiG~~iVa~~l~~~GfeVi~lG~~-v~~eeiv~aA~e~~adiVglS 662 (762)
T 2xij_A 617 HDRGAKVIATGFADLGFDVDIGPLF-QTPREVAQQAVDADVHAVGVS 662 (762)
T ss_dssp CCHHHHHHHHHHHHTTCEEEECCTT-CCHHHHHHHHHHTTCSEEEEE
T ss_pred hhHHHHHHHHHHHhCCeEEeeCCCC-CCHHHHHHHHHHcCCCEEEEe
Confidence 3345556777888999999999887 556888899999999999994
No 351
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=28.93 E-value=1.4e+02 Score=24.15 Aligned_cols=86 Identities=13% Similarity=0.032 Sum_probs=43.6
Q ss_pred CHHHHHHHHHHh--cCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCC-----c-
Q 045940 89 DMHERKAEMARR--ADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIK-----S- 160 (189)
Q Consensus 89 ~~~~R~~~m~~~--sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~-----~- 160 (189)
++.+=-+.+.+. .++++...-++|+.+|....+--. ..+|||+++... -..+--..+.| .|-+- .
T Consensus 186 ~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~~k~G-~~~~~~~~~~H---tgal~~~~~g~~ 258 (288)
T 1oi7_A 186 TFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD---HMKKPVVGFIGG-RSAPKGKRMGH---AGAIIMGNVGTP 258 (288)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHH---HCCSCEEEEESC-C---------------------CCSH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEEEEec-CCCCccccCcc---hhhcccCCCCCH
Confidence 454444444442 447777777778777755544221 357999998653 22211110111 11110 0
Q ss_pred c------ccCcEEEeCCHHHHHHHhhc
Q 045940 161 S------ARNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 161 ~------~~~~i~~~~~~ee~~~~l~~ 181 (189)
+ ..--+..++|++|+.+.+++
T Consensus 259 ~~~~aa~~~aGv~~~~~~~el~~~~~~ 285 (288)
T 1oi7_A 259 ESKLRAFAEAGIPVADTIDEIVELVKK 285 (288)
T ss_dssp HHHHHHHHHHTCCBCSSHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEeCCHHHHHHHHHH
Confidence 0 11235788999999998765
No 352
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=28.89 E-value=2e+02 Score=22.15 Aligned_cols=30 Identities=23% Similarity=0.342 Sum_probs=26.4
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++.-.+.|.+|+.+
T Consensus 11 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 40 (287)
T 3pxx_A 11 KVVLVTGGAR-GQGRSHAVKLAEEGADIILF 40 (287)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-hHHHHHHHHHHHCCCeEEEE
Confidence 3579999998 99999999999999988876
No 353
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=28.89 E-value=53 Score=25.14 Aligned_cols=41 Identities=24% Similarity=0.322 Sum_probs=23.5
Q ss_pred eEEEEEcCCCCCCC-hHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 5 KRVCVFCGSNSGNR-KIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~-~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
+.|-=||||..... +...+.++.+.+........||.|||+
T Consensus 2 ~iViK~GGs~l~~~~~~~~~~~~~i~~l~~g~~vvlV~ggG~ 43 (219)
T 2ij9_A 2 KVVLSLGGSVLSNESEKIREFAKTIESVAQQNQVFVVVGGGK 43 (219)
T ss_dssp EEEEEECSSTTTTCHHHHHHHHHHHHHHHHHSEEEEEECCHH
T ss_pred eEEEEeChhhhCChHHHHHHHHHHHHHHcCCCEEEEEECcch
Confidence 44556788876531 344555555554433223468999865
No 354
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.88 E-value=48 Score=25.19 Aligned_cols=29 Identities=28% Similarity=0.440 Sum_probs=23.7
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|-+|+.+
T Consensus 5 ~vlITGas~-gIG~~~a~~l~~~G~~V~~~ 33 (236)
T 1ooe_A 5 KVIVYGGKG-ALGSAILEFFKKNGYTVLNI 33 (236)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 468899887 88888998888888777766
No 355
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=28.86 E-value=1.7e+02 Score=22.19 Aligned_cols=33 Identities=12% Similarity=0.033 Sum_probs=20.1
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
+++-|-|+++ -.-+.+.+.|+++|+.|+.-+..
T Consensus 8 k~~lVTGas~--------gIG~aia~~l~~~G~~V~~~~r~ 40 (247)
T 2jah_A 8 KVALITGASS--------GIGEATARALAAEGAAVAIAARR 40 (247)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEECC
Confidence 4566666654 23345667777778877655443
No 356
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=28.82 E-value=71 Score=24.06 Aligned_cols=32 Identities=19% Similarity=0.141 Sum_probs=16.3
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHC
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVER 35 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~ 35 (189)
|++|.|+.+|-.+.++.-.+.++++.+.+.++
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~ 32 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREA 32 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHh
Confidence 34455444443332344456666666666554
No 357
>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*
Probab=28.81 E-value=53 Score=24.99 Aligned_cols=33 Identities=9% Similarity=0.109 Sum_probs=20.5
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
++|-|.|+++ -.-+++.+.|+++|+.|+.-+..
T Consensus 12 k~vlITGasg--------giG~~la~~l~~~G~~V~~~~r~ 44 (254)
T 2wsb_A 12 ACAAVTGAGS--------GIGLEICRAFAASGARLILIDRE 44 (254)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeCC
Confidence 4666777664 23446667777778877665543
No 358
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=28.77 E-value=83 Score=25.29 Aligned_cols=68 Identities=21% Similarity=0.344 Sum_probs=40.4
Q ss_pred HHHHHHhcCeeEEec---CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeC
Q 045940 94 KAEMARRADAFIALP---GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAK 170 (189)
Q Consensus 94 ~~~m~~~sda~I~lp---GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~ 170 (189)
...+...||++|... .|+|+- +.|++. .++|+|..+.. .+.++++ ++ ....+.-.+
T Consensus 276 ~~~~~~~adv~v~ps~~~e~~~~~--~~Ea~a------~G~PvI~~~~~----~~~e~i~----~~-----~~g~~~~~~ 334 (406)
T 2gek_A 276 KASAMRSADVYCAPHLGGESFGIV--LVEAMA------AGTAVVASDLD----AFRRVLA----DG-----DAGRLVPVD 334 (406)
T ss_dssp HHHHHHHSSEEEECCCSCCSSCHH--HHHHHH------HTCEEEECCCH----HHHHHHT----TT-----TSSEECCTT
T ss_pred HHHHHHHCCEEEecCCCCCCCchH--HHHHHH------cCCCEEEecCC----cHHHHhc----CC-----CceEEeCCC
Confidence 356678999988763 455643 667774 68999987653 2333332 11 111222236
Q ss_pred CHHHHHHHhhcC
Q 045940 171 NARDLLQGMEVP 182 (189)
Q Consensus 171 ~~ee~~~~l~~~ 182 (189)
|++++.+.|.+.
T Consensus 335 d~~~l~~~i~~l 346 (406)
T 2gek_A 335 DADGMAAALIGI 346 (406)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 888888887654
No 359
>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}
Probab=28.74 E-value=40 Score=25.47 Aligned_cols=28 Identities=21% Similarity=0.227 Sum_probs=14.1
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 9 vlVTGas~-gIG~~~a~~l~~~G~~V~~~ 36 (223)
T 3uce_A 9 YVVLGGTS-GIGAELAKQLESEHTIVHVA 36 (223)
T ss_dssp EEEETTTS-HHHHHHHHHHCSTTEEEEEE
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEEe
Confidence 35555554 55555555544444444443
No 360
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=28.62 E-value=69 Score=26.08 Aligned_cols=126 Identities=16% Similarity=0.202 Sum_probs=59.2
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCC
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQT 80 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~ 80 (189)
|+.|++|+++.-... +...+.+.++.++|.++|+.++.=-.. . +...+. ...+..+. ...
T Consensus 1 m~~m~ki~iI~n~~~---~~~~~~~~~l~~~L~~~g~~v~~~~~~-~------~~~~~~-----~~~~~~~~-----~~g 60 (307)
T 1u0t_A 1 MTAHRSVLLVVHTGR---DEATETARRVEKVLGDNKIALRVLSAE-A------VDRGSL-----HLAPDDMR-----AMG 60 (307)
T ss_dssp ----CEEEEEESSSG---GGGSHHHHHHHHHHHTTTCEEEEEC-------------------------------------
T ss_pred CCCCCEEEEEEeCCC---HHHHHHHHHHHHHHHHCCCEEEEecch-h------hhhhcc-----cccccccc-----ccc
Confidence 777889999986433 344567889999999999987652211 0 000000 00010000 000
Q ss_pred CceEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC--CCCc-----hHHHHHHHHHH
Q 045940 81 VGDVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV--DGYY-----DSLLRFFDKGV 153 (189)
Q Consensus 81 ~~~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~--~g~~-----~~l~~~l~~~~ 153 (189)
. +. . ...|.....+..|.+|+ -||=||+.+....+.- .++|++-+|. -||+ +++.+.++.+.
T Consensus 61 ~-~~---~-~~~~~~~~~~~~d~vi~-~GGDGT~l~a~~~~~~-----~~~pvlgi~~G~~gfl~~~~~~~~~~~~~~i~ 129 (307)
T 1u0t_A 61 V-EI---E-VVDADQHAADGCELVLV-LGGDGTFLRAAELARN-----ASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVV 129 (307)
T ss_dssp --------------------CCCEEE-EECHHHHHHHHHHHHH-----HTCCEEEEECSSCCSSCSEEGGGHHHHHHHHH
T ss_pred c-cc---c-ccccccccccCCCEEEE-EeCCHHHHHHHHHhcc-----CCCCEEEEeCCCCccCcccCHHHHHHHHHHHH
Confidence 0 00 0 01111123445676665 5789999998877642 3578776664 3554 34555666655
Q ss_pred HcCC
Q 045940 154 EEGF 157 (189)
Q Consensus 154 ~~g~ 157 (189)
+..+
T Consensus 130 ~g~~ 133 (307)
T 1u0t_A 130 AQDY 133 (307)
T ss_dssp HTCC
T ss_pred cCCc
Confidence 5443
No 361
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=28.56 E-value=49 Score=25.89 Aligned_cols=25 Identities=32% Similarity=0.436 Sum_probs=11.0
Q ss_pred EEEcCCCCChhHHHHHHHHhcCCeEE
Q 045940 39 LVYGGGSVGLMGLVSQTIFDGGCHVL 64 (189)
Q Consensus 39 lv~GGg~~GlM~a~a~ga~~~gg~vi 64 (189)
|||||+. |+=.++++...+.|.+|+
T Consensus 22 lVTGas~-gIG~aia~~l~~~G~~V~ 46 (270)
T 3is3_A 22 LVTGSGR-GIGAAVAVHLGRLGAKVV 46 (270)
T ss_dssp EESCTTS-HHHHHHHHHHHHTTCEEE
T ss_pred EEECCCc-hHHHHHHHHHHHCCCEEE
Confidence 4444443 444444444444444443
No 362
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=28.54 E-value=45 Score=26.24 Aligned_cols=29 Identities=28% Similarity=0.474 Sum_probs=18.8
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 31 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 59 (283)
T 1g0o_A 31 VALVTGAGR-GIGREMAMELGRRGCKVIVN 59 (283)
T ss_dssp EEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 456666665 66666776666666666554
No 363
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=28.51 E-value=59 Score=24.99 Aligned_cols=28 Identities=32% Similarity=0.504 Sum_probs=15.3
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 12 vlITGas~-gIG~~~a~~l~~~G~~V~~~ 39 (261)
T 3n74_A 12 ALITGAGS-GFGEGMAKRFAKGGAKVVIV 39 (261)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 45555555 55555555555555555444
No 364
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=28.51 E-value=46 Score=25.97 Aligned_cols=18 Identities=22% Similarity=0.316 Sum_probs=9.6
Q ss_pred HHHHHHHHCCCeEEEcCC
Q 045940 27 DLATQLVERKINLVYGGG 44 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GGg 44 (189)
++++.|+++|+.|+.-+.
T Consensus 25 aia~~l~~~G~~V~~~~r 42 (262)
T 3pk0_A 25 GIATVFARAGANVAVAGR 42 (262)
T ss_dssp HHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHCCCEEEEEeC
Confidence 455555566666554433
No 365
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=28.50 E-value=1.1e+02 Score=25.61 Aligned_cols=50 Identities=10% Similarity=-0.006 Sum_probs=32.1
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEEecCCH
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGDVLIVSDM 90 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~~~~~~~~ 90 (189)
..+.||+ .|+| ++++|.+.|=+|+.+-+....|.-......++.++.+++
T Consensus 21 I~ilGs~-l~~~--l~~aAk~lG~~vi~vd~~~~~p~~~~~~~ad~~~~~d~~ 70 (361)
T 2r7k_A 21 IATLGSH-TSLH--ILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVDNF 70 (361)
T ss_dssp EEEESST-THHH--HHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECSSG
T ss_pred EEEECcH-HHHH--HHHHHHHCCCEEEEEECCCCCCcccccccCceEEECCCc
Confidence 3555777 4888 999999999999998665322211123334566666655
No 366
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=28.49 E-value=48 Score=26.06 Aligned_cols=30 Identities=23% Similarity=0.292 Sum_probs=22.4
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 29 k~vlITGasg-gIG~~la~~l~~~G~~V~~~ 58 (286)
T 1xu9_A 29 KKVIVTGASK-GIGREMAYHLAKMGAHVVVT 58 (286)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3467888776 88888888777777777666
No 367
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=28.49 E-value=52 Score=25.85 Aligned_cols=56 Identities=20% Similarity=0.182 Sum_probs=35.5
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc-CCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYG-GGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~G-Gg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
+++-|-|+++ -.-+++++.|+++|+.++.- ......-+++.+...+.++++..+.-
T Consensus 28 k~~lVTGas~--------GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (267)
T 3u5t_A 28 KVAIVTGASR--------GIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQA 84 (267)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEeCCCC--------HHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEc
Confidence 4566667664 23457778888889998753 33324555556555566777776643
No 368
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=28.46 E-value=61 Score=24.47 Aligned_cols=30 Identities=10% Similarity=0.235 Sum_probs=25.8
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
..|||||+. |+=.++++...+.|-+|+.+-
T Consensus 4 ~vlITGas~-gIG~~ia~~l~~~G~~V~~~~ 33 (235)
T 3l77_A 4 VAVITGASR-GIGEAIARALARDGYALALGA 33 (235)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEEe
Confidence 468999988 999999999999998887763
No 369
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=28.39 E-value=59 Score=25.27 Aligned_cols=9 Identities=0% Similarity=-0.016 Sum_probs=5.7
Q ss_pred CHHHHHHHh
Q 045940 171 NARDLLQGM 179 (189)
Q Consensus 171 ~~ee~~~~l 179 (189)
+|+|+.+.+
T Consensus 208 ~~~dvA~~v 216 (260)
T 1nff_A 208 EPVEVSNLV 216 (260)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 567766655
No 370
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=28.36 E-value=36 Score=28.83 Aligned_cols=36 Identities=11% Similarity=0.121 Sum_probs=23.8
Q ss_pred EEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 6 RVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 6 ~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
+|+|.+|......+.=...|+.+.+.|-+.||.++.
T Consensus 39 ~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~ 74 (383)
T 3k3p_A 39 TLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKT 74 (383)
T ss_dssp EEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred eEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEE
Confidence 455555544444555577888888888778887664
No 371
>2fvy_A D-galactose-binding periplasmic protein; periplasmic binding protien, hinge, chemotaxis, transport,; HET: BGC; 0.92A {Escherichia coli} SCOP: c.93.1.1 PDB: 1glg_A* 2fw0_A* 2gbp_A* 2qw1_A* 2hph_A* 2ipn_A* 2ipm_A* 2ipl_A* 1gca_A* 1gcg_A 3ga5_A* 3gbp_A*
Probab=28.35 E-value=1.1e+02 Score=23.64 Aligned_cols=36 Identities=17% Similarity=0.098 Sum_probs=22.2
Q ss_pred HHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 98 ARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 98 ~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
....|++|+.|......++....+. ..+.|+++++.
T Consensus 57 ~~~vdgiii~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 92 (309)
T 2fvy_A 57 AKGVKALAINLVDPAAAGTVIEKAR-----GQNVPVVFFNK 92 (309)
T ss_dssp HTTCSEEEECCSSGGGHHHHHHHHH-----TTTCCEEEESS
T ss_pred HcCCCEEEEeCCCcchhHHHHHHHH-----HCCCcEEEecC
Confidence 4557888888765544444444332 35678888875
No 372
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=28.29 E-value=47 Score=25.78 Aligned_cols=26 Identities=23% Similarity=0.379 Sum_probs=12.0
Q ss_pred EEEcCCCCChhHHHHHHHHhcCCeEEE
Q 045940 39 LVYGGGSVGLMGLVSQTIFDGGCHVLG 65 (189)
Q Consensus 39 lv~GGg~~GlM~a~a~ga~~~gg~viG 65 (189)
|||||+. |+=.++++...+.|.+|+.
T Consensus 10 lVTGas~-gIG~aia~~l~~~G~~V~~ 35 (257)
T 3imf_A 10 IITGGSS-GMGKGMATRFAKEGARVVI 35 (257)
T ss_dssp EETTTTS-HHHHHHHHHHHHTTCEEEE
T ss_pred EEECCCC-HHHHHHHHHHHHCCCEEEE
Confidence 4444444 4444444444444444443
No 373
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=28.25 E-value=60 Score=25.26 Aligned_cols=30 Identities=27% Similarity=0.332 Sum_probs=25.3
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||.. |+=.++++...+.|.+|+.+
T Consensus 22 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 51 (253)
T 2nm0_A 22 RSVLVTGGNR-GIGLAIARAFADAGDKVAIT 51 (253)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 3579999988 99999999988888887766
No 374
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=28.25 E-value=60 Score=25.18 Aligned_cols=18 Identities=22% Similarity=0.182 Sum_probs=9.9
Q ss_pred HHHHHHHHHCCCeEEEcC
Q 045940 26 LDLATQLVERKINLVYGG 43 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GG 43 (189)
+.+.+.|+++|+.|+.-+
T Consensus 21 ~~ia~~l~~~G~~V~~~~ 38 (262)
T 1zem_A 21 LATALRLAEEGTAIALLD 38 (262)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEe
Confidence 345555566666655443
No 375
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=28.16 E-value=55 Score=25.04 Aligned_cols=31 Identities=23% Similarity=0.377 Sum_probs=26.7
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||.. |+=.++++...+.|.+|+.+-
T Consensus 10 k~vlITGas~-giG~~~a~~l~~~G~~V~~~~ 40 (253)
T 3qiv_A 10 KVGIVTGSGG-GIGQAYAEALAREGAAVVVAD 40 (253)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEEc
Confidence 4569999988 999999999999998888763
No 376
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=28.00 E-value=49 Score=25.67 Aligned_cols=17 Identities=12% Similarity=0.171 Sum_probs=8.6
Q ss_pred HHHHHHHHCCCeEEEcC
Q 045940 27 DLATQLVERKINLVYGG 43 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GG 43 (189)
++++.|+++|+.|+.-+
T Consensus 27 ~ia~~l~~~G~~V~~~~ 43 (256)
T 3gaf_A 27 AIAGTFAKAGASVVVTD 43 (256)
T ss_dssp HHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHCCCEEEEEe
Confidence 44455555566554433
No 377
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=27.98 E-value=67 Score=26.30 Aligned_cols=36 Identities=14% Similarity=0.067 Sum_probs=27.1
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
+++|+|.++..+ ...+...+..|++.|.++||.|..
T Consensus 18 ~~~MrIl~~~~~----~~Ghv~~~~~La~~L~~~GheV~v 53 (398)
T 3oti_A 18 GRHMRVLFVSSP----GIGHLFPLIQLAWGFRTAGHDVLI 53 (398)
T ss_dssp -CCCEEEEECCS----SHHHHGGGHHHHHHHHHTTCEEEE
T ss_pred hhcCEEEEEcCC----CcchHhHHHHHHHHHHHCCCEEEE
Confidence 356789888754 355667778899999999998654
No 378
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=27.95 E-value=46 Score=25.74 Aligned_cols=18 Identities=17% Similarity=0.060 Sum_probs=11.0
Q ss_pred HHHHHHHHCCCeEEEcCC
Q 045940 27 DLATQLVERKINLVYGGG 44 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GGg 44 (189)
++++.|+++|+.|+.-+.
T Consensus 16 ~ia~~l~~~G~~V~~~~r 33 (254)
T 1zmt_A 16 GSALRLSEAGHTVACHDE 33 (254)
T ss_dssp HHHHHHHHTTCEEEECCG
T ss_pred HHHHHHHHCCCEEEEEeC
Confidence 455666667777665443
No 379
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=27.94 E-value=55 Score=25.86 Aligned_cols=30 Identities=17% Similarity=0.049 Sum_probs=21.3
Q ss_pred CeEEEcCC---------------CCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGG---------------SVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg---------------~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+ ..|+=.|.++.+.+.|..|+-+
T Consensus 10 ~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~ 54 (226)
T 1u7z_A 10 NIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLV 54 (226)
T ss_dssp EEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEE
Confidence 46899986 4144456677777888888776
No 380
>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*
Probab=27.90 E-value=61 Score=25.01 Aligned_cols=29 Identities=17% Similarity=0.361 Sum_probs=19.7
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|.+|+.+
T Consensus 18 ~vlITGasg-giG~~~a~~l~~~G~~V~~~ 46 (278)
T 2bgk_A 18 VAIITGGAG-GIGETTAKLFVRYGAKVVIA 46 (278)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 457777766 77777777776666666655
No 381
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=27.86 E-value=61 Score=25.36 Aligned_cols=27 Identities=26% Similarity=0.366 Sum_probs=12.0
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLG 65 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viG 65 (189)
.|||||.. |+=.++++...+.|.+|+.
T Consensus 24 vlVTGas~-gIG~aia~~l~~~G~~V~~ 50 (273)
T 1ae1_A 24 ALVTGGSK-GIGYAIVEELAGLGARVYT 50 (273)
T ss_dssp EEEESCSS-HHHHHHHHHHHHTTCEEEE
T ss_pred EEEECCcc-hHHHHHHHHHHHCCCEEEE
Confidence 34444444 4444444444444444433
No 382
>2ew2_A 2-dehydropantoate 2-reductase, putative; alpha-structure, alpha-beta structure, structural genomics, protein structure initiative; HET: MSE; 2.00A {Enterococcus faecalis}
Probab=27.83 E-value=72 Score=25.06 Aligned_cols=30 Identities=7% Similarity=0.068 Sum_probs=21.0
Q ss_pred CCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 3 KFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
+|++|+|+|... ....++..|+++|+.|..
T Consensus 2 ~~m~i~iiG~G~---------~G~~~a~~l~~~g~~V~~ 31 (316)
T 2ew2_A 2 NAMKIAIAGAGA---------MGSRLGIMLHQGGNDVTL 31 (316)
T ss_dssp --CEEEEECCSH---------HHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECcCH---------HHHHHHHHHHhCCCcEEE
Confidence 467999999753 344677888889997653
No 383
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=27.80 E-value=1.4e+02 Score=23.30 Aligned_cols=54 Identities=19% Similarity=0.151 Sum_probs=0.0
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC-CCChhHHHHHHHHhcCCeEEEE
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGG-SVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg-~~GlM~a~a~ga~~~gg~viGv 66 (189)
++|-|-|+++ -.-+++++.|+++|+.|+.-.. .....+.+.+...+.++++..+
T Consensus 29 k~vlVTGas~--------gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (269)
T 4dmm_A 29 RIALVTGASR--------GIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAV 83 (269)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEE
No 384
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=27.74 E-value=60 Score=25.95 Aligned_cols=31 Identities=19% Similarity=0.234 Sum_probs=27.0
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 32 k~vlVTGas~-gIG~~la~~l~~~G~~V~~~~ 62 (301)
T 3tjr_A 32 RAAVVTGGAS-GIGLATATEFARRGARLVLSD 62 (301)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEE
Confidence 4679999998 999999999999998888773
No 385
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=27.74 E-value=75 Score=24.17 Aligned_cols=34 Identities=15% Similarity=0.090 Sum_probs=23.8
Q ss_pred CCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 045940 3 KFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGG 44 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg 44 (189)
+.++|-|.|+++ -.-+++.+.|+++|+.|+.-+.
T Consensus 6 ~~k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r 39 (241)
T 1dhr_A 6 EARRVLVYGGRG--------ALGSRCVQAFRARNWWVASIDV 39 (241)
T ss_dssp CCCEEEEETTTS--------HHHHHHHHHHHTTTCEEEEEES
T ss_pred CCCEEEEECCCc--------HHHHHHHHHHHhCCCEEEEEeC
Confidence 346788888775 2445777888889999876543
No 386
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=27.74 E-value=60 Score=24.95 Aligned_cols=29 Identities=10% Similarity=-0.065 Sum_probs=18.0
Q ss_pred CeEEEcCC--CCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGG--SVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg--~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||. . |+=.++++...+.|.+|+.+
T Consensus 16 ~vlITGa~~~~-giG~~ia~~l~~~G~~V~~~ 46 (271)
T 3ek2_A 16 RILLTGLLSNR-SIAYGIAKACKREGAELAFT 46 (271)
T ss_dssp EEEECCCCSTT-SHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCCCC-cHHHHHHHHHHHcCCCEEEE
Confidence 45666665 5 66666666666666665554
No 387
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=27.62 E-value=1.9e+02 Score=21.45 Aligned_cols=30 Identities=17% Similarity=0.213 Sum_probs=23.3
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcC--CeEEEEe
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGG--CHVLGVI 67 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~g--g~viGv~ 67 (189)
..|||||.. |+=.++++...+.| -.|+.+.
T Consensus 5 ~vlItGasg-giG~~la~~l~~~g~~~~V~~~~ 36 (250)
T 1yo6_A 5 SVVVTGANR-GIGLGLVQQLVKDKNIRHIIATA 36 (250)
T ss_dssp EEEESSCSS-HHHHHHHHHHHTCTTCCEEEEEE
T ss_pred EEEEecCCc-hHHHHHHHHHHhcCCCcEEEEEe
Confidence 468888877 88888888888887 6777763
No 388
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=27.60 E-value=48 Score=26.29 Aligned_cols=30 Identities=33% Similarity=0.509 Sum_probs=25.1
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 34 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 63 (281)
T 4dry_A 34 RIALVTGGGT-GVGRGIAQALSAEGYSVVIT 63 (281)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4568999887 99899999888888888776
No 389
>4hs4_A Chromate reductase; triple-layered, A/B/A structure, NAD(P)H-dependent FMN reduc oxidoreductase; HET: FMN; 2.10A {Gluconacetobacter hansenii} PDB: 3s2y_A* 4h6p_A*
Probab=27.60 E-value=45 Score=25.38 Aligned_cols=46 Identities=20% Similarity=0.364 Sum_probs=21.6
Q ss_pred HHHHHHhcCeeEEe-cCCc----chHHHHHHHHHHHhcC-CCCCcEEEEeCC
Q 045940 94 KAEMARRADAFIAL-PGGY----GTMEELLEMITWSQLG-IHDKPVGVLNVD 139 (189)
Q Consensus 94 ~~~m~~~sda~I~l-pGG~----GTL~El~~~~~~~~~~-~~~kPiill~~~ 139 (189)
-.-.++.||++|+. |==. |.|=-+++-+.....+ ..+||+.++...
T Consensus 67 ~~~~i~~AD~iVi~tP~Y~~s~p~~LK~~iD~~~~~~~~~l~gK~v~~v~ts 118 (199)
T 4hs4_A 67 MAQQIATADAVVIVTPEYNYSVPGVLKNAIDWLSRVSPQPLAGKPVALVTAS 118 (199)
T ss_dssp HHHHHHHSSEEEEEECCBTTBCCHHHHHHHHHHTTSSSCTTTTCEEEEEEEC
T ss_pred HHHHHHhCCEEEEEcCccCCCcCHHHHHHHHHhcccCCcccCCCEEEEEEeC
Confidence 33445678875554 4322 3333333222110001 367888877654
No 390
>1r5l_A Alpha-TTP, protein (alpha-tocopherol transfer protein); ataxia with vitamin E deficiency, transport protein; HET: MSE VIV; 1.50A {Homo sapiens} SCOP: a.5.3.1 c.13.1.1 PDB: 1oiz_A* 1oip_A*
Probab=27.57 E-value=1.2e+02 Score=23.41 Aligned_cols=61 Identities=10% Similarity=0.162 Sum_probs=42.6
Q ss_pred HHHHHHHHHHhcCC--CCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCC--HHHHHHHhh
Q 045940 115 EELLEMITWSQLGI--HDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKN--ARDLLQGME 180 (189)
Q Consensus 115 ~El~~~~~~~~~~~--~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~--~ee~~~~l~ 180 (189)
+-+-.++...|-.. .=+-++++|..-+++.++.++. .|++++..+.|++..+ .+++.+++.
T Consensus 158 ~~~k~~~~~~q~~yPerl~~i~ivN~P~~f~~~~~~vk-----pfl~~~t~~Ki~~~~~~~~~~L~~~i~ 222 (262)
T 1r5l_A 158 SVAKKIAAVLTDSFPLKVRGIHLINEPVIFHAVFSMIK-----PFLTEKIKERIHMHGNNYKQSLLQHFP 222 (262)
T ss_dssp HHHHHHHHHHHTSSSSCEEEEEEESCCGGGHHHHHHHG-----GGSCHHHHTTEEECCSSCHHHHHHHST
T ss_pred HHHHHHHHHHHhhCChhhceEEEEeCCHHHHHHHHHHH-----HhcCHHHHhheEEeCCCcHHHHHHHhh
Confidence 33444454445443 2257889998878888888664 4788888899999854 688888875
No 391
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=27.57 E-value=1.1e+02 Score=20.43 Aligned_cols=30 Identities=13% Similarity=0.194 Sum_probs=21.4
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
=+.|-|||.+.. ++...++.|.+.||..++
T Consensus 56 ~~~ivv~C~~G~--------rS~~aa~~L~~~G~~~~~ 85 (103)
T 3iwh_A 56 NEIYYIVCAGGV--------RSAKVVEYLEANGIDAVN 85 (103)
T ss_dssp TSEEEEECSSSS--------HHHHHHHHHHTTTCEEEE
T ss_pred CCeEEEECCCCH--------HHHHHHHHHHHcCCCEEE
Confidence 357889997632 345567788889998775
No 392
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=27.55 E-value=49 Score=25.47 Aligned_cols=29 Identities=28% Similarity=0.312 Sum_probs=23.6
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|.+|+.+
T Consensus 17 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 45 (247)
T 1uzm_A 17 SVLVTGGNR-GIGLAIAQRLAADGHKVAVT 45 (247)
T ss_dssp EEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 468888887 88888888888888887766
No 393
>3cky_A 2-hydroxymethyl glutarate dehydrogenase; rossmann fold, two domain enzyme, oxidoreductase; 2.30A {Eubacterium barkeri}
Probab=27.44 E-value=52 Score=26.04 Aligned_cols=31 Identities=16% Similarity=0.203 Sum_probs=20.2
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv 40 (189)
|+++++|+|+|....+ ..+++.|++.|+.|+
T Consensus 1 M~~~~~i~iiG~G~~G---------~~~a~~l~~~g~~V~ 31 (301)
T 3cky_A 1 MEKSIKIGFIGLGAMG---------KPMAINLLKEGVTVY 31 (301)
T ss_dssp ---CCEEEEECCCTTH---------HHHHHHHHHTTCEEE
T ss_pred CCCCCEEEEECccHHH---------HHHHHHHHHCCCeEE
Confidence 7778899999976542 345666778888765
No 394
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=27.41 E-value=72 Score=26.36 Aligned_cols=67 Identities=21% Similarity=0.093 Sum_probs=39.1
Q ss_pred HHHHHhcCeeEEec---C-CcchHHHHHHHHHHHhcCCCCCcEEEE-eCCCCchHHHHHHHHHHHcCCCCccccCcEEEe
Q 045940 95 AEMARRADAFIALP---G-GYGTMEELLEMITWSQLGIHDKPVGVL-NVDGYYDSLLRFFDKGVEEGFIKSSARNIVISA 169 (189)
Q Consensus 95 ~~m~~~sda~I~lp---G-G~GTL~El~~~~~~~~~~~~~kPiill-~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~ 169 (189)
..+...||++++.+ + |--+ +.|++ ..++||+.- +..+ +.++.+ .+.+.| .+..+
T Consensus 272 ~~~y~~aDv~vl~ss~~e~gg~~---~lEAm------A~G~PVI~~~~~~~-~~e~~~---~~~~~G--------~l~~~ 330 (374)
T 2xci_A 272 KELYPVGKIAIVGGTFVNIGGHN---LLEPT------CWGIPVIYGPYTHK-VNDLKE---FLEKEG--------AGFEV 330 (374)
T ss_dssp HHHGGGEEEEEECSSSSSSCCCC---CHHHH------TTTCCEEECSCCTT-SHHHHH---HHHHTT--------CEEEC
T ss_pred HHHHHhCCEEEECCcccCCCCcC---HHHHH------HhCCCEEECCCccC-hHHHHH---HHHHCC--------CEEEe
Confidence 45668899887643 2 2233 45666 379999852 2232 333332 222233 35566
Q ss_pred CCHHHHHHHhhcC
Q 045940 170 KNARDLLQGMEVP 182 (189)
Q Consensus 170 ~~~ee~~~~l~~~ 182 (189)
+|++++.+.|.+.
T Consensus 331 ~d~~~La~ai~~l 343 (374)
T 2xci_A 331 KNETELVTKLTEL 343 (374)
T ss_dssp CSHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHH
Confidence 8999988887654
No 395
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=27.39 E-value=51 Score=26.65 Aligned_cols=29 Identities=10% Similarity=0.318 Sum_probs=24.1
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 48 ~~lVTGas~-GIG~aia~~la~~G~~Vv~~ 76 (317)
T 3oec_A 48 VAFITGAAR-GQGRTHAVRLAQDGADIVAI 76 (317)
T ss_dssp EEEESSCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCeEEEE
Confidence 568888887 88888888888888888776
No 396
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=27.31 E-value=81 Score=24.39 Aligned_cols=38 Identities=13% Similarity=-0.024 Sum_probs=25.1
Q ss_pred HHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 96 EMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 96 ~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
++....|++|+.|-......+..+.+. ..+.|+++++.
T Consensus 53 l~~~~vdgiii~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 90 (306)
T 8abp_A 53 LAASGAKGFVICTPDPKLGSAIVAKAR-----GYDMKVIAVDD 90 (306)
T ss_dssp HHHTTCCEEEEECSCGGGHHHHHHHHH-----HTTCEEEEESS
T ss_pred HHHcCCCEEEEeCCCchhhHHHHHHHH-----HCCCcEEEeCC
Confidence 344567999999876665555443332 35789998873
No 397
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=27.30 E-value=64 Score=24.79 Aligned_cols=30 Identities=23% Similarity=0.351 Sum_probs=26.1
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 8 k~~lVTGas~-gIG~aia~~l~~~G~~V~~~ 37 (247)
T 2jah_A 8 KVALITGASS-GIGEATARALAAEGAAVAIA 37 (247)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 3579999988 99999999999999888776
No 398
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=27.30 E-value=28 Score=27.46 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=12.2
Q ss_pred CcEEEEeC-CCCchHHHHHHHHH
Q 045940 131 KPVGVLNV-DGYYDSLLRFFDKG 152 (189)
Q Consensus 131 kPiill~~-~g~~~~l~~~l~~~ 152 (189)
-|.+..+. .|+.+.+..|.+.+
T Consensus 158 ~~~g~~D~~~~~e~~~~~W~~~l 180 (219)
T 3hr4_A 158 TPMGEGDELSGQEDAFRSWAVQT 180 (219)
T ss_dssp SCCEEEETTSCHHHHHHHHHHHH
T ss_pred eCCEEEecCCCcHHHHHHHHHHH
Confidence 36666653 35555666665543
No 399
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=27.29 E-value=50 Score=25.47 Aligned_cols=18 Identities=6% Similarity=0.193 Sum_probs=10.7
Q ss_pred HHHHHHHHHHCCCeEEEc
Q 045940 25 ALDLATQLVERKINLVYG 42 (189)
Q Consensus 25 A~~lg~~la~~g~~lv~G 42 (189)
-+++++.|+++|+.|+.-
T Consensus 20 G~~~a~~l~~~G~~v~~~ 37 (264)
T 3i4f_A 20 GKQVTEKLLAKGYSVTVT 37 (264)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEE
Confidence 345666666677766543
No 400
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=27.24 E-value=62 Score=25.58 Aligned_cols=29 Identities=21% Similarity=0.343 Sum_probs=16.7
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 11 ~vlVTGas~-GIG~aia~~l~~~G~~V~~~ 39 (285)
T 3sc4_A 11 TMFISGGSR-GIGLAIAKRVAADGANVALV 39 (285)
T ss_dssp EEEEESCSS-HHHHHHHHHHHTTTCEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 345666655 66666666555555555544
No 401
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=27.21 E-value=50 Score=25.47 Aligned_cols=17 Identities=6% Similarity=0.294 Sum_probs=8.5
Q ss_pred HHHHHHHHCCCeEEEcC
Q 045940 27 DLATQLVERKINLVYGG 43 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GG 43 (189)
++.+.|+++|+.|+.-+
T Consensus 21 ~ia~~l~~~G~~V~~~~ 37 (253)
T 1hxh_A 21 EVVKLLLGEGAKVAFSD 37 (253)
T ss_dssp HHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHCCCEEEEEe
Confidence 44445555555554433
No 402
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=27.21 E-value=49 Score=26.55 Aligned_cols=29 Identities=24% Similarity=0.284 Sum_probs=22.1
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 43 ~vlVTGas~-GIG~aia~~la~~G~~V~~~ 71 (293)
T 3rih_A 43 SVLVTGGTK-GIGRGIATVFARAGANVAVA 71 (293)
T ss_dssp EEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 457888877 88888888777777777766
No 403
>1vej_A Riken cDNA 4931431F19; UBA domain, three helix bundle, ubiquitin associated domain, structural genomics; NMR {Mus musculus} SCOP: a.5.2.1
Probab=27.18 E-value=15 Score=24.23 Aligned_cols=40 Identities=13% Similarity=0.097 Sum_probs=27.5
Q ss_pred HHHHHHHcCCCCccc--cCcEEEeCCHHHHHHHhhcCCCCCC
Q 045940 148 FFDKGVEEGFIKSSA--RNIVISAKNARDLLQGMEVPNLLPS 187 (189)
Q Consensus 148 ~l~~~~~~g~i~~~~--~~~i~~~~~~ee~~~~l~~~~~~~~ 187 (189)
.++.+.+-||-+.+. .-+.....|++.++++|....+++|
T Consensus 32 qi~qL~eMGF~dr~~~~~AL~~t~Gnve~Ave~L~~~~~~~s 73 (74)
T 1vej_A 32 ELEELKALGFANRDANLQALVATDGDIHAAIEMLLGASGPSS 73 (74)
T ss_dssp HHHHHHHHTCCCHHHHHHHHHHTTSCHHHHHHHHHTCCCCCC
T ss_pred HHHHHHHcCCCcHHHHHHHHHHhCCCHHHHHHHHHhCCCCCC
Confidence 445556668865443 2334556799999999998877765
No 404
>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}
Probab=27.18 E-value=57 Score=24.91 Aligned_cols=10 Identities=0% Similarity=0.411 Sum_probs=6.8
Q ss_pred CHHHHHHHhh
Q 045940 171 NARDLLQGME 180 (189)
Q Consensus 171 ~~ee~~~~l~ 180 (189)
+|+|+.+.+.
T Consensus 202 ~p~dvA~~i~ 211 (245)
T 3e9n_A 202 EPKEIANAIR 211 (245)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 6777776654
No 405
>2l8b_A Protein TRAI, DNA helicase I; RECD, hydrolase; NMR {Escherichia coli}
Probab=27.17 E-value=24 Score=27.44 Aligned_cols=128 Identities=15% Similarity=0.104 Sum_probs=65.4
Q ss_pred EEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCCh-hH---HHHHHHHhcCCeEEEEecCccccccccCC-CCc
Q 045940 8 CVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGL-MG---LVSQTIFDGGCHVLGVIPKALVPIEISGQ-TVG 82 (189)
Q Consensus 8 ~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~Gl-M~---a~a~ga~~~gg~viGv~p~~~~~~e~~~~-~~~ 82 (189)
.+|--....+++++...+..+.. ..+-+.+|.|-|+++- =+ +++..+.+.|-+|.++.|+.....+...+ ...
T Consensus 26 ~~~~~~~~~~~~~~~~a~~~l~~--s~~~~~iv~g~ggs~~~~~~~a~L~~~a~~~Gr~V~vLAp~~~s~~~l~~~~~l~ 103 (189)
T 2l8b_A 26 TVHPEKSVPRTAGYSDAVSVLAQ--DRPSLAIVSGQGGAAGQRERVAELVMMAREQGREVQIIAADRRSQMNMKQDERLS 103 (189)
T ss_dssp CCCGGGCCCCHHHHHHHHHHHHH--HSCCEECCBCSSCSHHHHHHHHHHHHHHHHTTCCEEEECSTTHHHHHHSCTTTCS
T ss_pred ccCCcCccccCccchhHHHHHhc--cCCceEEEecccchHHHHHHHHHHHHHHHhcCeEEEEEcCchHHHHHHHhhcCcC
Confidence 33433334445556554444433 3456778877665443 33 47778888899999998865432221111 000
Q ss_pred eEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCC
Q 045940 83 DVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVD 139 (189)
Q Consensus 83 ~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~ 139 (189)
.-.+..+.......=....|.+||=.+.-=++.|+...+.... .++-.++|+|..
T Consensus 104 ~~t~t~~~ll~~~~~~tp~s~lIVD~AekLS~kE~~~Lld~A~--~~naqvvll~~~ 158 (189)
T 2l8b_A 104 GELITGRRQLLEGMAFTPGSTVIVDQGEKLSLKETLTLLDGAA--RHNVQVLITDSG 158 (189)
T ss_dssp SCSSSTTTTTTTSCCCCCCCEEEEEESSSHHHHHHHHHHHHHH--HTTCCEEEEESS
T ss_pred cceeehhhhhcCCCCCCCCCEEEEechhhcCHHHHHHHHHHHH--hcCCEEEEeCCc
Confidence 0000110000000000134456666666667777765554333 467889999874
No 406
>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*
Probab=27.16 E-value=58 Score=24.92 Aligned_cols=29 Identities=21% Similarity=0.392 Sum_probs=19.6
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|-+|+.+
T Consensus 14 ~vlVTGasg-giG~~~a~~l~~~G~~V~~~ 42 (265)
T 2o23_A 14 VAVITGGAS-GLGLATAERLVGQGASAVLL 42 (265)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 457777766 77777777766666666655
No 407
>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D
Probab=27.14 E-value=93 Score=24.64 Aligned_cols=78 Identities=18% Similarity=0.138 Sum_probs=39.9
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCcccccccc-CCCCceEEecCC-HHHHHHHHHHhcCeeEEecCCcch
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEIS-GQTVGDVLIVSD-MHERKAEMARRADAFIALPGGYGT 113 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~-~~~~~~~~~~~~-~~~R~~~m~~~sda~I~lpGG~GT 113 (189)
...+|+|++. |+=.++++-|+..|.+|+++-.+.. ..+.. .-..+..+...+ -...+.+ ...|.+|- -|+ -+
T Consensus 127 ~~vlV~Ga~G-~vG~~~~~~a~~~Ga~Vi~~~~~~~-~~~~~~~~ga~~~~~~~~~~~~~~~~--~~~d~vid-~g~-~~ 200 (302)
T 1iz0_A 127 EKVLVQAAAG-ALGTAAVQVARAMGLRVLAAASRPE-KLALPLALGAEEAATYAEVPERAKAW--GGLDLVLE-VRG-KE 200 (302)
T ss_dssp CEEEESSTTB-HHHHHHHHHHHHTTCEEEEEESSGG-GSHHHHHTTCSEEEEGGGHHHHHHHT--TSEEEEEE-CSC-TT
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEEeCCHH-HHHHHHhcCCCEEEECCcchhHHHHh--cCceEEEE-CCH-HH
Confidence 4568888733 4444566777788889998854321 11111 011223333322 1111111 45788887 776 56
Q ss_pred HHHHHH
Q 045940 114 MEELLE 119 (189)
Q Consensus 114 L~El~~ 119 (189)
+++.+.
T Consensus 201 ~~~~~~ 206 (302)
T 1iz0_A 201 VEESLG 206 (302)
T ss_dssp HHHHHT
T ss_pred HHHHHH
Confidence 655543
No 408
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=27.11 E-value=2.5e+02 Score=22.79 Aligned_cols=93 Identities=17% Similarity=0.268 Sum_probs=56.4
Q ss_pred HHHHHHHHHHHCCCeEE-EcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCC-CCceEEecCCHHHHHHHHHHhc
Q 045940 24 AALDLATQLVERKINLV-YGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQ-TVGDVLIVSDMHERKAEMARRA 101 (189)
Q Consensus 24 ~A~~lg~~la~~g~~lv-~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~-~~~~~~~~~~~~~R~~~m~~~s 101 (189)
...+..+.|.+.|+.++ |---. =..++...+.|...+ .|... +.... .+ .++ +--+.+.+..
T Consensus 123 ~tv~aa~~L~~~Gf~Vlpy~~dd----~~~akrl~~~G~~aV--mPlg~---pIGsG~Gi------~~~-~lI~~I~e~~ 186 (265)
T 1wv2_A 123 ETLKAAEQLVKDGFDVMVYTSDD----PIIARQLAEIGCIAV--MPLAG---LIGSGLGI------CNP-YNLRIILEEA 186 (265)
T ss_dssp HHHHHHHHHHTTTCEEEEEECSC----HHHHHHHHHSCCSEE--EECSS---STTCCCCC------SCH-HHHHHHHHHC
T ss_pred HHHHHHHHHHHCCCEEEEEeCCC----HHHHHHHHHhCCCEE--EeCCc---cCCCCCCc------CCH-HHHHHHHhcC
Confidence 34456777888899987 55433 244555566777655 44211 11111 11 122 2225566778
Q ss_pred CeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 102 DAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 102 da~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
+.-|+..||++|.+.+..++.+ +.--+++++
T Consensus 187 ~vPVI~eGGI~TPsDAa~AmeL------GAdgVlVgS 217 (265)
T 1wv2_A 187 KVPVLVDAGVGTASDAAIAMEL------GCEAVLMNT 217 (265)
T ss_dssp SSCBEEESCCCSHHHHHHHHHH------TCSEEEESH
T ss_pred CCCEEEeCCCCCHHHHHHHHHc------CCCEEEECh
Confidence 9999999999999999888853 344456654
No 409
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=27.08 E-value=46 Score=26.26 Aligned_cols=30 Identities=13% Similarity=0.181 Sum_probs=25.4
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 24 k~~lVTGas~-gIG~aia~~L~~~G~~V~~~ 53 (288)
T 2x9g_A 24 PAAVVTGAAK-RIGRAIAVKLHQTGYRVVIH 53 (288)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHHTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCeEEEE
Confidence 4579999987 99999999988888888776
No 410
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=27.07 E-value=45 Score=27.38 Aligned_cols=38 Identities=21% Similarity=0.334 Sum_probs=25.0
Q ss_pred HhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 99 RRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 99 ~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
+..|. |+.-||=||+.|+...+.... ...+.|+.+++.
T Consensus 81 ~~~d~-vvv~GGDGTl~~v~~~l~~~~-~~~~~plgiiP~ 118 (332)
T 2bon_A 81 FGVAT-VIAGGGDGTINEVSTALIQCE-GDDIPALGILPL 118 (332)
T ss_dssp HTCSE-EEEEESHHHHHHHHHHHHHCC-SSCCCEEEEEEC
T ss_pred cCCCE-EEEEccchHHHHHHHHHhhcc-cCCCCeEEEecC
Confidence 34565 455688999999998875211 124578887753
No 411
>1kqn_A Nmnat, nicotinamide mononucleotide adenylyl transferase; nucleotidyltransferase superfamily; HET: NAD; 2.20A {Homo sapiens} SCOP: c.26.1.3 PDB: 1kqo_A* 1kr2_A* 1kku_A 1gzu_A*
Probab=27.06 E-value=98 Score=25.00 Aligned_cols=35 Identities=14% Similarity=0.002 Sum_probs=29.1
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCC
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERK 36 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g 36 (189)
++.++|+||||+=++..--+...+++.-+.+...+
T Consensus 5 ~~~~~i~i~gGsFDPiH~GHl~l~~~a~~~~~~d~ 39 (279)
T 1kqn_A 5 EKTEVVLLACGSFNPITNMHLRLFELAKDYMNGTG 39 (279)
T ss_dssp -CEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTS
T ss_pred CCCceEEEEEeeecHhhHHHHHHHHHHHHHhcccC
Confidence 57789999999999988888888888877777655
No 412
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=27.05 E-value=72 Score=26.10 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=30.0
Q ss_pred CCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 3 KFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
+|++|.++... ..-+......|++.|.++||.|..=..+
T Consensus 19 ~m~rIl~~~~~----~~GHv~p~l~La~~L~~~Gh~V~v~~~~ 57 (415)
T 3rsc_A 19 HMAHLLIVNVA----SHGLILPTLTVVTELVRRGHRVSYVTAG 57 (415)
T ss_dssp CCCEEEEECCS----CHHHHGGGHHHHHHHHHTTCEEEEEECG
T ss_pred cCCEEEEEeCC----CccccccHHHHHHHHHHCCCEEEEEeCH
Confidence 57899988764 3456777889999999999987665543
No 413
>3ax6_A Phosphoribosylaminoimidazole carboxylase, ATPase; structural genomics, riken structural genomics/proteomics in RSGI, ATP grAsp, ATP binding; HET: ADP; 2.20A {Thermotoga maritima}
Probab=26.98 E-value=82 Score=25.88 Aligned_cols=11 Identities=9% Similarity=-0.133 Sum_probs=6.9
Q ss_pred HhcCeeEEecC
Q 045940 99 RRADAFIALPG 109 (189)
Q Consensus 99 ~~sda~I~lpG 109 (189)
+..|+++..+.
T Consensus 61 ~~~d~v~~~~e 71 (380)
T 3ax6_A 61 KGSDVTTYDLE 71 (380)
T ss_dssp HTCSEEEESCS
T ss_pred hcCCEEEeccc
Confidence 66787665443
No 414
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=26.90 E-value=80 Score=24.34 Aligned_cols=29 Identities=10% Similarity=0.222 Sum_probs=16.1
Q ss_pred eEEEcCCC-CChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGS-VGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~-~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+. .|+=.++++...+.|.+|+.+
T Consensus 10 vlVTGasg~~GIG~~ia~~l~~~G~~V~~~ 39 (266)
T 3oig_A 10 IVVMGVANKRSIAWGIARSLHEAGARLIFT 39 (266)
T ss_dssp EEEECCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEcCCCCCcHHHHHHHHHHHCCCEEEEe
Confidence 45666552 156666666666666555544
No 415
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=26.87 E-value=66 Score=26.13 Aligned_cols=69 Identities=17% Similarity=0.168 Sum_probs=42.4
Q ss_pred HHHHHHhcCeeEEec--CCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCC
Q 045940 94 KAEMARRADAFIALP--GGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKN 171 (189)
Q Consensus 94 ~~~m~~~sda~I~lp--GG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~ 171 (189)
...+...||++|.-. .|+|.- +.|+++ .++|++..+..| +.+++ + .. ...+.-.+|
T Consensus 324 ~~~~~~~adv~v~ps~~e~~~~~--~~EAma------~G~Pvi~s~~~~----~~e~~----~-----~~-~g~~~~~~d 381 (439)
T 3fro_A 324 VRELYGSVDFVIIPSYFEPFGLV--ALEAMC------LGAIPIASAVGG----LRDII----T-----NE-TGILVKAGD 381 (439)
T ss_dssp HHHHHTTCSEEEECBSCCSSCHH--HHHHHH------TTCEEEEESSTH----HHHHC----C-----TT-TCEEECTTC
T ss_pred HHHHHHHCCEEEeCCCCCCccHH--HHHHHH------CCCCeEEcCCCC----cceeE----E-----cC-ceEEeCCCC
Confidence 345668899887543 455554 677774 799999887643 22222 1 11 233333459
Q ss_pred HHHHHHHhhcCCC
Q 045940 172 ARDLLQGMEVPNL 184 (189)
Q Consensus 172 ~ee~~~~l~~~~~ 184 (189)
++++.+.|.+...
T Consensus 382 ~~~la~~i~~ll~ 394 (439)
T 3fro_A 382 PGELANAILKALE 394 (439)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999998876543
No 416
>1yob_A Flavodoxin 2, flavodoxin II; alpha-beta fold, non- covalently bound FMN, electron transport; HET: FMN; 2.25A {Azotobacter vinelandii} SCOP: c.23.5.1
Probab=26.84 E-value=56 Score=24.03 Aligned_cols=18 Identities=22% Similarity=0.447 Sum_probs=8.8
Q ss_pred hHHHHHHHHhcCCeEEEE
Q 045940 49 MGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 49 M~a~a~ga~~~gg~viGv 66 (189)
+..+.+-..+.|.+++|-
T Consensus 110 ~~~l~~~l~~~G~~~~~~ 127 (179)
T 1yob_A 110 LGELYSFFKDRGAKIVGS 127 (179)
T ss_dssp HHHHHHHHHTTTCEEECC
T ss_pred HHHHHHHHHHCCCEEEEe
Confidence 344444334456666654
No 417
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=26.80 E-value=67 Score=24.18 Aligned_cols=28 Identities=21% Similarity=0.430 Sum_probs=23.3
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||.. |+=.++++..++.|-+|+.+
T Consensus 4 vlVtGasg-~iG~~l~~~L~~~g~~V~~~ 31 (255)
T 2dkn_A 4 IAITGSAS-GIGAALKELLARAGHTVIGI 31 (255)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCc-HHHHHHHHHHHhCCCEEEEE
Confidence 58899887 88888888888888888776
No 418
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=26.77 E-value=64 Score=25.72 Aligned_cols=29 Identities=21% Similarity=0.250 Sum_probs=21.2
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|.+|+.+
T Consensus 36 ~vlVTGas~-gIG~aia~~L~~~G~~V~~~ 64 (291)
T 3cxt_A 36 IALVTGASY-GIGFAIASAYAKAGATIVFN 64 (291)
T ss_dssp EEEEETCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 467787776 77777777777777776665
No 419
>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*
Probab=26.70 E-value=79 Score=24.65 Aligned_cols=28 Identities=18% Similarity=0.265 Sum_probs=14.3
Q ss_pred eEEEcCC--CCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGG--SVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg--~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+ . |+=.++++...+.|.+|+.+
T Consensus 9 vlVTGas~~~-gIG~~~a~~l~~~G~~V~~~ 38 (275)
T 2pd4_A 9 GLIVGVANNK-SIAYGIAQSCFNQGATLAFT 38 (275)
T ss_dssp EEEECCCSTT-SHHHHHHHHHHTTTCEEEEE
T ss_pred EEEECCCCCC-cHHHHHHHHHHHCCCEEEEE
Confidence 4555554 3 55555555555555554444
No 420
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=26.70 E-value=89 Score=23.22 Aligned_cols=34 Identities=15% Similarity=0.069 Sum_probs=20.2
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHH-HHHCCCe
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQ-LVERKIN 38 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~-la~~g~~ 38 (189)
|++|.|+.+|... ...-.+.|+.+.+. +.++|+.
T Consensus 2 Mmkilii~gS~r~-~g~t~~la~~i~~~~l~~~g~~ 36 (197)
T 2vzf_A 2 TYSIVAISGSPSR-NSTTAKLAEYALAHVLARSDSQ 36 (197)
T ss_dssp CEEEEEEECCSST-TCHHHHHHHHHHHHHHHHSSEE
T ss_pred CceEEEEECCCCC-CChHHHHHHHHHHHHHHHCCCe
Confidence 4566666655432 33445677777777 7766643
No 421
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=26.70 E-value=76 Score=25.07 Aligned_cols=35 Identities=26% Similarity=0.355 Sum_probs=24.4
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE-cCCC
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY-GGGS 45 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~-GGg~ 45 (189)
..++||.|+|+-. +.-+.=+.|.++|+.|.+ |.|.
T Consensus 25 ~Lr~avVCaSN~N-------RSMEAH~~L~k~Gf~V~SfGTGs 60 (214)
T 4h3k_B 25 PLRVAVVSSSNQN-------RSMEAHNILSKRGFSVRSFGTGT 60 (214)
T ss_dssp -CEEEEEESSSSS-------HHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCeEEEECCCCcc-------hhHHHHHHHHHCCCceEeecCCC
Confidence 3579999999753 333445678899999876 5444
No 422
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=26.67 E-value=52 Score=25.46 Aligned_cols=33 Identities=24% Similarity=0.295 Sum_probs=20.2
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
++|-|.|+++ -.-+++.+.|+++|+.|+.-+..
T Consensus 5 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 37 (260)
T 1x1t_A 5 KVAVVTGSTS--------GIGLGIATALAAQGADIVLNGFG 37 (260)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEECCS
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHcCCEEEEEeCC
Confidence 4566666654 23346677777788887655543
No 423
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=26.64 E-value=1.1e+02 Score=23.81 Aligned_cols=35 Identities=20% Similarity=0.148 Sum_probs=23.2
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv 40 (189)
|++.++|.|-.+.+. ..+| +.+|-+.|.+.|+.+-
T Consensus 1 m~~~k~IllgvTGai---aa~k--~~~ll~~L~~~g~eV~ 35 (209)
T 3zqu_A 1 MSGPERITLAMTGAS---GAQY--GLRLLDCLVQEEREVH 35 (209)
T ss_dssp CCSCSEEEEEECSSS---CHHH--HHHHHHHHHHTTCEEE
T ss_pred CCCCCEEEEEEECHH---HHHH--HHHHHHHHHHCCCEEE
Confidence 777777666544432 2344 7788888888888754
No 424
>1via_A Shikimate kinase; structural genomics, transferase; HET: MSE; 1.57A {Campylobacter jejuni} SCOP: c.37.1.2
Probab=26.60 E-value=27 Score=25.28 Aligned_cols=33 Identities=21% Similarity=0.209 Sum_probs=17.9
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHH-CCCeEEE
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVE-RKINLVY 41 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~-~g~~lv~ 41 (189)
|+.|++|.+.|.+..|.+. +++.||+ .|+..+.
T Consensus 1 ~~~m~~i~i~G~~GsGKsT--------la~~La~~l~~~~~d 34 (175)
T 1via_A 1 MSLAKNIVFIGFMGSGKST--------LARALAKDLDLVFLD 34 (175)
T ss_dssp ----CCEEEECCTTSCHHH--------HHHHHHHHHTCEEEE
T ss_pred CCCCCEEEEEcCCCCCHHH--------HHHHHHHHcCCCEEc
Confidence 6778889999888766332 3444443 2666665
No 425
>3t6o_A Sulfate transporter/antisigma-factor antagonist S; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 2.10A {Planctomyces limnophilus}
Probab=26.58 E-value=71 Score=21.74 Aligned_cols=55 Identities=7% Similarity=-0.008 Sum_probs=33.5
Q ss_pred CcchHHHHHHHHHHHhcCC-CCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhh
Q 045940 110 GYGTMEELLEMITWSQLGI-HDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGME 180 (189)
Q Consensus 110 G~GTL~El~~~~~~~~~~~-~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~ 180 (189)
|+|.|.++...+ .. .+.++.+.+.. ..+...++. .|+ .+.+.+.+|.+++++.+.
T Consensus 65 Gl~~L~~~~~~~-----~~~~g~~l~l~~~~---~~v~~~l~~---~gl-----~~~~~i~~~~~~Al~~~~ 120 (121)
T 3t6o_A 65 FIELLVRGWKRI-----KEDQQGVFALCSVS---PYCVEVLQV---THI-----DEVWPRYSTKQEALLAMA 120 (121)
T ss_dssp HHHHHHHHHHHH-----TTSTTCEEEEESCC---HHHHHHHTT---CSG-----GGGSCEESSHHHHHHHTC
T ss_pred HHHHHHHHHHHH-----HHhcCCEEEEEeCC---HHHHHHHHH---hCc-----cceecccCCHHHHHHHhc
Confidence 466665554443 35 67899998765 344444432 122 234568899999998764
No 426
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=26.54 E-value=1.6e+02 Score=24.34 Aligned_cols=30 Identities=30% Similarity=0.452 Sum_probs=19.6
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEEEecC
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPK 69 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~ 69 (189)
.+|.|||..|.| +++.|.+.|-+|+.+-|.
T Consensus 15 IlIlG~G~lg~~--la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 15 IGIIGGGQLGKM--MAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp EEEECCSHHHHH--HHHHHHHTTCEEEEEESC
T ss_pred EEEECCCHHHHH--HHHHHHHCCCEEEEEECC
Confidence 356666654444 667778888888877553
No 427
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=26.52 E-value=1.3e+02 Score=23.48 Aligned_cols=40 Identities=20% Similarity=0.254 Sum_probs=25.6
Q ss_pred hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCc
Q 045940 100 RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYY 142 (189)
Q Consensus 100 ~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~ 142 (189)
..++.|+|+|| .|...+++.+.- ....-+-+.+++.+.||
T Consensus 44 ~~~~~l~LsgG-sTp~~ly~~L~~--~~i~w~~v~~f~~DEr~ 83 (232)
T 1vl1_A 44 KDKIFVVLAGG-RTPLPVYEKLAE--QKFPWNRIHFFLSDERY 83 (232)
T ss_dssp CSCEEEEECCS-TTHHHHHHHHTT--SCCCGGGEEEEESEEES
T ss_pred CCCeEEEEcCC-ccHHHHHHHHHH--cCCChhHEEEEeCeEee
Confidence 45789999988 677778877752 12223456666665555
No 428
>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}
Probab=26.49 E-value=45 Score=26.46 Aligned_cols=31 Identities=3% Similarity=0.094 Sum_probs=0.0
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv 40 (189)
++|++|.|.|++. ..-+.+.+.|.++|+.|+
T Consensus 2 ~~~~~ilVtGatG--------~iG~~l~~~L~~~g~~V~ 32 (321)
T 3c1o_A 2 SHMEKIIIYGGTG--------YIGKFMVRASLSFSHPTF 32 (321)
T ss_dssp --CCCEEEETTTS--------TTHHHHHHHHHHTTCCEE
T ss_pred CcccEEEEEcCCc--------hhHHHHHHHHHhCCCcEE
No 429
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=26.44 E-value=52 Score=25.65 Aligned_cols=21 Identities=29% Similarity=0.389 Sum_probs=12.6
Q ss_pred HHHHHHHHHHCCCeEEEcCCC
Q 045940 25 ALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 25 A~~lg~~la~~g~~lv~GGg~ 45 (189)
-+.+++.|+++|+.|+.-+..
T Consensus 23 G~aia~~l~~~G~~V~~~~r~ 43 (267)
T 3t4x_A 23 GKAIATSLVAEGANVLINGRR 43 (267)
T ss_dssp HHHHHHHHHHTTCEEEEEESS
T ss_pred HHHHHHHHHHCCCEEEEEeCC
Confidence 345666666777776655443
No 430
>3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis}
Probab=26.40 E-value=83 Score=24.54 Aligned_cols=33 Identities=21% Similarity=0.192 Sum_probs=0.0
Q ss_pred CCC---CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 1 MGK---FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 1 ~~~---~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|++ +++|.|.|++. -....+.+.|.++|+.|+.
T Consensus 1 M~~~~~~~~vlVtGatG--------~iG~~l~~~L~~~g~~V~~ 36 (321)
T 3vps_A 1 MQRNTLKHRILITGGAG--------FIGGHLARALVASGEEVTV 36 (321)
T ss_dssp ------CCEEEEETTTS--------HHHHHHHHHHHHTTCCEEE
T ss_pred CCcccCCCeEEEECCCC--------hHHHHHHHHHHHCCCEEEE
No 431
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=26.38 E-value=52 Score=25.62 Aligned_cols=17 Identities=12% Similarity=0.151 Sum_probs=9.0
Q ss_pred HHHHHHHHCCCeEEEcC
Q 045940 27 DLATQLVERKINLVYGG 43 (189)
Q Consensus 27 ~lg~~la~~g~~lv~GG 43 (189)
.+.+.|+++|+.|+.-+
T Consensus 21 ~ia~~l~~~G~~V~~~~ 37 (278)
T 1spx_A 21 ATAVLFAREGAKVTITG 37 (278)
T ss_dssp HHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHCCCEEEEEe
Confidence 44555555666655443
No 432
>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}
Probab=26.36 E-value=2.2e+02 Score=21.81 Aligned_cols=28 Identities=11% Similarity=-0.037 Sum_probs=16.5
Q ss_pred eEEEcCCCCChhHHHHHHHHhc-CCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDG-GCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~-gg~viGv 66 (189)
.+||||.. ++=.++++...+. |-+|+++
T Consensus 3 ilVtGatG-~iG~~l~~~L~~~~g~~V~~~ 31 (289)
T 3e48_A 3 IMLTGATG-HLGTHITNQAIANHIDHFHIG 31 (289)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCTTEEEE
T ss_pred EEEEcCCc-hHHHHHHHHHhhCCCCcEEEE
Confidence 46777654 5555666664444 5566665
No 433
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=26.35 E-value=75 Score=27.96 Aligned_cols=115 Identities=12% Similarity=0.153 Sum_probs=63.7
Q ss_pred HCCCeEEEcCCCCChhHHHHHHHHhcC-CeEEEEecCccccccccCCCC-ceEEecCCHHHHHHHHHHhcCeeEEecCCc
Q 045940 34 ERKINLVYGGGSVGLMGLVSQTIFDGG-CHVLGVIPKALVPIEISGQTV-GDVLIVSDMHERKAEMARRADAFIALPGGY 111 (189)
Q Consensus 34 ~~g~~lv~GGg~~GlM~a~a~ga~~~g-g~viGv~p~~~~~~e~~~~~~-~~~~~~~~~~~R~~~m~~~sda~I~lpGG~ 111 (189)
.+|+.+|-||...|----++++|+..| |.|.-+.|..... ...+ -|+++.+. +.+..|++++=|| .
T Consensus 235 ~~G~vlvigGs~~GA~~laa~aAlr~GaGlv~~~~~~~~~~----~~~~~pe~m~~~~-------~~~~~~a~~iGPG-l 302 (475)
T 3k5w_A 235 DYGHAHVLLGKHSGAGLLSALSALSFGSGVVSVQALECEIT----SNNKPLELVFCEN-------FPNLLSAFALGMG-L 302 (475)
T ss_dssp GGCEEEEEECSSHHHHHHHHHHHHHTTCSEEEEEESSSCCS----SSSSCTTSEEESS-------CCSSCSEEEECTT-C
T ss_pred CCCeEEEEeCCCCcHHHHHHHHHHHhCCCeEEEeccHHHhh----cccCChhheeehh-------hccCCCEEEEcCC-C
Confidence 368999988875566666778888877 6777667754211 1111 12333222 1257888888776 4
Q ss_pred chHH-HHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhh
Q 045940 112 GTME-ELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGME 180 (189)
Q Consensus 112 GTL~-El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~ 180 (189)
|+-+ ++.+++. .. |+ ++|-++.+.+ +++ ..+ .....++.++.|+...+.
T Consensus 303 G~~~~~l~~~l~------~~-p~-VlDADaL~~~--~~~------~~~----~~~~VlTPh~~E~~rL~g 352 (475)
T 3k5w_A 303 ENIPKDFNRWLE------LA-PC-VLDAGVFYHK--EIL------QAL----EKEAVLTPHPKEFLSLLN 352 (475)
T ss_dssp SSCCTTHHHHHH------HS-CE-EEEGGGGGSG--GGG------TTT----TSSEEEECCHHHHHHHHH
T ss_pred CCCHHHHHHHHh------cC-CE-EEECcccCCc--hhh------hcc----CCCEEECCCHHHHHHHhC
Confidence 4322 2222221 23 77 5666666521 111 011 123678888888877653
No 434
>1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A*
Probab=26.35 E-value=79 Score=24.90 Aligned_cols=29 Identities=17% Similarity=0.206 Sum_probs=21.4
Q ss_pred CeEEEcCC--CCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGG--SVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg--~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+ . |+=.++++.-.+.|.+|+.+
T Consensus 10 ~~lVTGas~~~-GIG~aia~~la~~G~~V~~~ 40 (297)
T 1d7o_A 10 RAFIAGIADDN-GYGWAVAKSLAAAGAEILVG 40 (297)
T ss_dssp EEEEECCSSSS-SHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCCCC-ChHHHHHHHHHHCCCeEEEe
Confidence 45788876 5 88788888777777777665
No 435
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=26.31 E-value=66 Score=25.59 Aligned_cols=30 Identities=27% Similarity=0.266 Sum_probs=22.6
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 50 k~vlVTGas~-GIG~aia~~la~~G~~V~~~ 79 (294)
T 3r3s_A 50 RKALVTGGDS-GIGRAAAIAYAREGADVAIN 79 (294)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3568888877 88888888877777777655
No 436
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=26.25 E-value=54 Score=25.18 Aligned_cols=30 Identities=20% Similarity=0.244 Sum_probs=26.0
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
..|||||+. |+=.++++...+.|.+|+.+.
T Consensus 6 ~~lVTGas~-gIG~~ia~~l~~~G~~V~~~~ 35 (246)
T 3osu_A 6 SALVTGASR-GIGRSIALQLAEEGYNVAVNY 35 (246)
T ss_dssp EEEETTCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred EEEEECCCC-hHHHHHHHHHHHCCCEEEEEe
Confidence 469999998 999999999999999887763
No 437
>2z04_A Phosphoribosylaminoimidazole carboxylase ATPase subunit; purine nucleotide biosynthetic pathway, structural genomics, NPPSFA; 2.35A {Aquifex aeolicus}
Probab=26.21 E-value=70 Score=26.09 Aligned_cols=29 Identities=7% Similarity=-0.023 Sum_probs=19.2
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|++|.|.|+. +.++.+.+.+.+.|+.++.
T Consensus 1 M~~Ililg~g---------~~~~~~~~a~~~~G~~v~~ 29 (365)
T 2z04_A 1 MLTVGILGGG---------QLGWMTILEGRKLGFKFHV 29 (365)
T ss_dssp -CEEEEECCS---------HHHHHHHHHHGGGTCEEEE
T ss_pred CCEEEEECCC---------HHHHHHHHHHHHCCCEEEE
Confidence 5678888764 4466777777777877553
No 438
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=26.12 E-value=1.9e+02 Score=21.79 Aligned_cols=54 Identities=17% Similarity=0.167 Sum_probs=26.0
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
++|-|.|+++ -..+++++.|+++|+.|+.-+...---+...+...+.+.++..+
T Consensus 6 k~vlITGas~--------gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~ 59 (247)
T 3lyl_A 6 KVALVTGASR--------GIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGL 59 (247)
T ss_dssp CEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 4455555553 23345666667777776655444122222233333345555444
No 439
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=26.12 E-value=54 Score=25.10 Aligned_cols=20 Identities=20% Similarity=0.222 Sum_probs=11.5
Q ss_pred HHHHHHHHHHCCCeEEEcCC
Q 045940 25 ALDLATQLVERKINLVYGGG 44 (189)
Q Consensus 25 A~~lg~~la~~g~~lv~GGg 44 (189)
-+++.+.|+++|+.|+.-+.
T Consensus 17 G~~ia~~l~~~G~~V~~~~r 36 (246)
T 2uvd_A 17 GRAIAIDLAKQGANVVVNYA 36 (246)
T ss_dssp HHHHHHHHHHTTCEEEEEES
T ss_pred HHHHHHHHHHCCCEEEEEeC
Confidence 33555666667777655433
No 440
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=26.07 E-value=48 Score=25.82 Aligned_cols=30 Identities=20% Similarity=0.283 Sum_probs=26.1
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 5 k~vlVTGas~-gIG~aia~~l~~~G~~vv~~ 34 (258)
T 3oid_A 5 KCALVTGSSR-GVGKAAAIRLAENGYNIVIN 34 (258)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEecCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 4579999998 99999999999999888765
No 441
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=26.03 E-value=53 Score=25.75 Aligned_cols=33 Identities=24% Similarity=0.214 Sum_probs=18.4
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
++|-|.|+++ -.-+++++.|+++|+.|+.-+..
T Consensus 7 k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~ 39 (280)
T 1xkq_A 7 KTVIITGSSN--------GIGRTTAILFAQEGANVTITGRS 39 (280)
T ss_dssp CEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEeCC
Confidence 3455555553 23345666667777776654443
No 442
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=25.96 E-value=69 Score=24.97 Aligned_cols=29 Identities=28% Similarity=0.552 Sum_probs=19.9
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|-+|+.+
T Consensus 34 ~vlVTGasg-gIG~~la~~l~~~G~~V~~~ 62 (279)
T 1xg5_A 34 LALVTGASG-GIGAAVARALVQQGLKVVGC 62 (279)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 457777766 77777777777776666655
No 443
>1p9o_A Phosphopantothenoylcysteine synthetase; ligase; 2.30A {Homo sapiens} SCOP: c.72.3.1
Probab=25.96 E-value=2.2e+02 Score=23.47 Aligned_cols=32 Identities=31% Similarity=0.535 Sum_probs=24.5
Q ss_pred CCCeEEEcCCC----------------CChhHHH-HHHHHhcCCeEEEE
Q 045940 35 RKINLVYGGGS----------------VGLMGLV-SQTIFDGGCHVLGV 66 (189)
Q Consensus 35 ~g~~lv~GGg~----------------~GlM~a~-a~ga~~~gg~viGv 66 (189)
+...|||+||+ +|-|+++ ++.|++.|..|+=|
T Consensus 37 k~~VLITaGgT~EpID~DpVRfItN~SSGkmG~aiAe~~~~~Ga~V~lv 85 (313)
T 1p9o_A 37 RRVVLVTSGGTKVPLEARPVRFLDNFSSGRRGATSAEAFLAAGYGVLFL 85 (313)
T ss_dssp CCEEEEEESBCEEESSSSCSEEEEECCCCHHHHHHHHHHHHTTCEEEEE
T ss_pred CeEEEEeCCCcccccCCCceeEecCCCCcHHHHHHHHHHHHCCCEEEEE
Confidence 33479999886 2989865 67777889998877
No 444
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=25.91 E-value=84 Score=25.36 Aligned_cols=140 Identities=13% Similarity=0.130 Sum_probs=64.2
Q ss_pred CCeEEEcCCCCChhHHHHHHHH-hcCCeEEEEecCcccccccc-CCCCceEEec--CCHHHHHHHHHHh--cCeeEEecC
Q 045940 36 KINLVYGGGSVGLMGLVSQTIF-DGGCHVLGVIPKALVPIEIS-GQTVGDVLIV--SDMHERKAEMARR--ADAFIALPG 109 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~-~~gg~viGv~p~~~~~~e~~-~~~~~~~~~~--~~~~~R~~~m~~~--sda~I~lpG 109 (189)
...+|+|+|+.|.+ ++.-|+ ..|.+||++-.... ..+.. ....+..+.. .+..++-..+... .|.++...|
T Consensus 165 ~~VlV~GaG~~g~~--a~~~a~~~~g~~Vi~~~~~~~-r~~~~~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~~~~ 241 (348)
T 4eez_A 165 DWQVIFGAGGLGNL--AIQYAKNVFGAKVIAVDINQD-KLNLAKKIGADVTINSGDVNPVDEIKKITGGLGVQSAIVCAV 241 (348)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTSCCEEEEEESCHH-HHHHHHHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEECCS
T ss_pred CEEEEEcCCCccHH--HHHHHHHhCCCEEEEEECcHH-HhhhhhhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEEecc
Confidence 35688888764443 334444 45678998854321 11111 1112233332 3444433332222 244555567
Q ss_pred CcchHHHHHHHHHH----HhcCCCCCcE------------EEEeC-CCCchHHHHHHHHHHHcCCCCccccCcEEEeCCH
Q 045940 110 GYGTMEELLEMITW----SQLGIHDKPV------------GVLNV-DGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNA 172 (189)
Q Consensus 110 G~GTL~El~~~~~~----~~~~~~~kPi------------ill~~-~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ 172 (189)
+--|++.....+.. ...+....+. -+.+. .+-+.++.+.+ +++++|-+++-. ..+-.++.
T Consensus 242 ~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~-~l~~~g~i~p~~--~~~~l~~~ 318 (348)
T 4eez_A 242 ARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAF-QFGAEGKVKPIV--ATRKLEEI 318 (348)
T ss_dssp CHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHH-HHHHTTSCCCCE--EEECGGGH
T ss_pred CcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHH-HHHHcCCCEEEE--EEEeHHHH
Confidence 66666655443310 0011111111 11111 11223444433 456778776532 23446788
Q ss_pred HHHHHHhhc
Q 045940 173 RDLLQGMEV 181 (189)
Q Consensus 173 ee~~~~l~~ 181 (189)
.|+++.+++
T Consensus 319 ~~A~~~l~~ 327 (348)
T 4eez_A 319 NDIIDEMKA 327 (348)
T ss_dssp HHHHHHHHT
T ss_pred HHHHHHHHC
Confidence 888888765
No 445
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=25.83 E-value=1.5e+02 Score=23.29 Aligned_cols=20 Identities=10% Similarity=0.019 Sum_probs=11.1
Q ss_pred HHHHHHHHHCCCeEEEcCCC
Q 045940 26 LDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GGg~ 45 (189)
+.+++.|+++|+.|+.-+..
T Consensus 22 ~aia~~la~~G~~V~~~~r~ 41 (280)
T 3tox_A 22 RAAALLFAREGAKVVVTARN 41 (280)
T ss_dssp HHHHHHHHHTTCEEEECCSC
T ss_pred HHHHHHHHHCCCEEEEEECC
Confidence 35555566666665554433
No 446
>3d40_A FOMA protein; fosfomycin, antibiotic resistance, kinase, phosphoryl transfer, transferase; 1.53A {Streptomyces wedmorensis} PDB: 3d41_A* 3qun_A* 3quo_A* 3qur_A* 3qvf_A* 3qvh_A*
Probab=25.79 E-value=1.2e+02 Score=24.32 Aligned_cols=41 Identities=20% Similarity=0.174 Sum_probs=23.9
Q ss_pred eEEEEEcCCCCCCCh--------HHHHHHHHHHHHHHHCC---CeEEEcCCCC
Q 045940 5 KRVCVFCGSNSGNRK--------IFSDAALDLATQLVERK---INLVYGGGSV 46 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~--------~~~~~A~~lg~~la~~g---~~lv~GGg~~ 46 (189)
+.|-=+||+...... ...+.|+++.++..+ | ..||.|||+.
T Consensus 25 ~iVIKlGGs~l~~~~~~~~~~~~~l~~la~~Ia~l~~~-G~~~vViVhGgG~~ 76 (286)
T 3d40_A 25 FLAIKVGGSLFSRKDEPGSLDDDAVTRFARNFARLAET-YRGRMVLISGGGAF 76 (286)
T ss_dssp EEEEEECGGGTBCTTSTTCBCHHHHHHHHHHHHHHHHH-TTTSEEEEECCCCC
T ss_pred EEEEEeCchHhCCCcccccchHHHHHHHHHHHHHHHHc-CCCeEEEEECCHHH
Confidence 344446776554322 455666666655433 4 4689999984
No 447
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=25.73 E-value=70 Score=24.92 Aligned_cols=31 Identities=19% Similarity=0.186 Sum_probs=24.2
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||.. |+=.++++...+.|.+|+.+.
T Consensus 32 k~vlITGasg-gIG~~la~~L~~~G~~V~~~~ 62 (272)
T 1yb1_A 32 EIVLITGAGH-GIGRLTAYEFAKLKSKLVLWD 62 (272)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEEE
Confidence 3568888887 888888888888888877763
No 448
>2abw_A PDX2 protein, glutaminase; PLP-synthase, vitamin B6, malaria, transferase; HET: PG4; 1.62A {Plasmodium falciparum} SCOP: c.23.16.1 PDB: 4ads_G
Probab=25.68 E-value=1.4e+02 Score=22.61 Aligned_cols=62 Identities=15% Similarity=0.088 Sum_probs=35.0
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHH---H---------HHHHHCCCeEEEcCCCCChhH-----------HHHHHHH
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDL---A---------TQLVERKINLVYGGGSVGLMG-----------LVSQTIF 57 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~l---g---------~~la~~g~~lv~GGg~~GlM~-----------a~a~ga~ 57 (189)
|+| ++|+|..-. ++-..+.+.-+++ | ..|.+....|+.||.. -+|. ...+.+.
T Consensus 1 ~~~-~~I~Il~~~--~~~~~~~~~l~~~~~~G~~~~~~~~~~~l~~~dglil~GG~~-~~~~~~~~~d~~~~~~~i~~~~ 76 (227)
T 2abw_A 1 MSE-ITIGVLSLQ--GDFEPHINHFIKLQIPSLNIIQVRNVHDLGLCDGLVIPGGES-TTVRRCCAYENDTLYNALVHFI 76 (227)
T ss_dssp -CC-EEEEEECTT--SCCHHHHHHHHTTCCTTEEEEEECSHHHHHTCSEEEECCSCH-HHHHHHTTHHHHHHHHHHHHHH
T ss_pred CCC-cEEEEEeCC--CCcHHHHHHHHHhccCCeEEEEEcCccccccCCEEEECCCcH-HHHHHHHHHhHHHHHHHHHHHH
Confidence 444 578887432 2345555555555 3 4566656666767543 3332 2334455
Q ss_pred hc-CCeEEEE
Q 045940 58 DG-GCHVLGV 66 (189)
Q Consensus 58 ~~-gg~viGv 66 (189)
+. |..+.||
T Consensus 77 ~~~g~PilGI 86 (227)
T 2abw_A 77 HVLKKPIWGT 86 (227)
T ss_dssp HTSCCCEEEE
T ss_pred HhcCCEEEEE
Confidence 67 8899999
No 449
>2fcr_A Flavodoxin; electron transport; HET: FMN; 1.80A {Chondrus crispus} SCOP: c.23.5.1
Probab=25.68 E-value=45 Score=24.37 Aligned_cols=19 Identities=11% Similarity=0.240 Sum_probs=10.3
Q ss_pred hhHHHHHHHHhcCCeEEEE
Q 045940 48 LMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 48 lM~a~a~ga~~~gg~viGv 66 (189)
.+..+.+-..+.|..+++-
T Consensus 105 a~~~l~~~l~~~G~~~~~~ 123 (173)
T 2fcr_A 105 AIEEIHDCFAKQGAKPVGF 123 (173)
T ss_dssp HHHHHHHHHHHTTCEEECC
T ss_pred HHHHHHHHHHHCCCEEEee
Confidence 4445555444566666654
No 450
>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A
Probab=25.67 E-value=59 Score=25.02 Aligned_cols=52 Identities=19% Similarity=0.146 Sum_probs=27.1
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
++|-|.|+++ -.-+++.+.|+++|+.|+.-+...- +...+...+.+.++..+
T Consensus 5 k~vlVTGas~--------giG~~ia~~l~~~G~~V~~~~r~~~--~~~~~~l~~~~~~~~~~ 56 (255)
T 2q2v_A 5 KTALVTGSTS--------GIGLGIAQVLARAGANIVLNGFGDP--APALAEIARHGVKAVHH 56 (255)
T ss_dssp CEEEESSCSS--------HHHHHHHHHHHHTTCEEEEECSSCC--HHHHHHHHTTSCCEEEE
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCch--HHHHHHHHhcCCceEEE
Confidence 4555666654 2344666677777887766554422 33333333335555444
No 451
>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}
Probab=25.65 E-value=55 Score=25.83 Aligned_cols=30 Identities=33% Similarity=0.413 Sum_probs=24.3
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 29 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (272)
T 4dyv_A 29 KIAIVTGAGS-GVGRAVAVALAGAGYGVALA 58 (272)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 4568888887 88888888888888887766
No 452
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=25.61 E-value=2.6e+02 Score=22.38 Aligned_cols=89 Identities=12% Similarity=0.160 Sum_probs=50.3
Q ss_pred HHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEecCccccccccCCCCceEEecCCHHHHHHHHHHhc--Ce
Q 045940 26 LDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIPKALVPIEISGQTVGDVLIVSDMHERKAEMARRA--DA 103 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p~~~~~~e~~~~~~~~~~~~~~~~~R~~~m~~~s--da 103 (189)
+++-+...+.|..++..-.+ .+. .+-|.+.|...|||.+......+ .++ +.-..+.+.. +.
T Consensus 152 ~~l~~~a~~lGl~~lvev~t---~ee-~~~A~~~Gad~IGv~~r~l~~~~------------~dl-~~~~~l~~~v~~~~ 214 (272)
T 3qja_A 152 VSMLDRTESLGMTALVEVHT---EQE-ADRALKAGAKVIGVNARDLMTLD------------VDR-DCFARIAPGLPSSV 214 (272)
T ss_dssp HHHHHHHHHTTCEEEEEESS---HHH-HHHHHHHTCSEEEEESBCTTTCC------------BCT-THHHHHGGGSCTTS
T ss_pred HHHHHHHHHCCCcEEEEcCC---HHH-HHHHHHCCCCEEEECCCcccccc------------cCH-HHHHHHHHhCcccC
Confidence 34444444567776655433 233 34466789999999753221110 011 1112333443 78
Q ss_pred eEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEe
Q 045940 104 FIALPGGYGTMEELLEMITWSQLGIHDKPVGVLN 137 (189)
Q Consensus 104 ~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~ 137 (189)
.|+..||+.|.+.+..+.. .+.--++++
T Consensus 215 pvVaegGI~t~edv~~l~~------~GadgvlVG 242 (272)
T 3qja_A 215 IRIAESGVRGTADLLAYAG------AGADAVLVG 242 (272)
T ss_dssp EEEEESCCCSHHHHHHHHH------TTCSEEEEC
T ss_pred EEEEECCCCCHHHHHHHHH------cCCCEEEEc
Confidence 8899999999998877663 344455654
No 453
>1ycd_A Hypothetical 27.3 kDa protein in AAP1-SMF2 intergenic region; esterase, lipase, serine hydrolase, structural genomics; HET: LI5; 1.70A {Saccharomyces cerevisiae}
Probab=25.59 E-value=95 Score=22.99 Aligned_cols=23 Identities=22% Similarity=0.414 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHHHHHHCCCeEEE
Q 045940 19 KIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 19 ~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
..+......+.+.|.+.|+.+++
T Consensus 19 ~~~~~~~~~l~~~l~~~g~~v~~ 41 (243)
T 1ycd_A 19 KVFSEKSSGIRKLLKKANVQCDY 41 (243)
T ss_dssp HHHHHHTHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHHhhcceEEEE
Confidence 44455677889999998998875
No 454
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=25.58 E-value=2.2e+02 Score=22.91 Aligned_cols=38 Identities=24% Similarity=0.336 Sum_probs=23.7
Q ss_pred EEEEcCCCCCCChHHHHHHHHHHHHHHHCCC--eEEEcCCC
Q 045940 7 VCVFCGSNSGNRKIFSDAALDLATQLVERKI--NLVYGGGS 45 (189)
Q Consensus 7 I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~--~lv~GGg~ 45 (189)
|-=+||+.....+.....++.+.. |.+.|+ .||.|||+
T Consensus 30 VIKlGGs~l~~~~~~~~~~~~i~~-l~~~G~~vVlVhGgG~ 69 (300)
T 2buf_A 30 VIKYGGNAMESEELKAGFARDVVL-MKAVGINPVVVHGGGP 69 (300)
T ss_dssp EEEECCTTTTSSHHHHHHHHHHHH-HHHTTCEEEEEECCCH
T ss_pred EEEECchhhCCchHHHHHHHHHHH-HHHCCCeEEEEECCcH
Confidence 344577766544445666777764 445576 58899965
No 455
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=25.53 E-value=56 Score=25.52 Aligned_cols=20 Identities=25% Similarity=0.370 Sum_probs=11.1
Q ss_pred HHHHHHHHHCCCeEEEcCCC
Q 045940 26 LDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GGg~ 45 (189)
+++++.|+++|+.|+.-+..
T Consensus 34 ~aia~~l~~~G~~V~~~~r~ 53 (266)
T 4egf_A 34 ADIARAFAAAGARLVLSGRD 53 (266)
T ss_dssp HHHHHHHHHTTCEEEEEESC
T ss_pred HHHHHHHHHCCCEEEEEeCC
Confidence 35555566666665554433
No 456
>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}
Probab=25.51 E-value=1e+02 Score=24.80 Aligned_cols=30 Identities=7% Similarity=0.086 Sum_probs=20.5
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEE
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLV 40 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv 40 (189)
.+|++|+|+|... ....+++.|+++|+.|+
T Consensus 19 ~~m~~I~iIG~G~---------mG~~~A~~l~~~G~~V~ 48 (310)
T 3doj_A 19 SHMMEVGFLGLGI---------MGKAMSMNLLKNGFKVT 48 (310)
T ss_dssp CCSCEEEEECCSH---------HHHHHHHHHHHTTCEEE
T ss_pred ccCCEEEEECccH---------HHHHHHHHHHHCCCeEE
Confidence 4567888887653 34566777777888654
No 457
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=25.41 E-value=47 Score=26.34 Aligned_cols=29 Identities=24% Similarity=0.311 Sum_probs=25.5
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 10 ~vlVTGas~-GIG~aia~~la~~G~~V~~~ 38 (280)
T 3tox_A 10 IAIVTGASS-GIGRAAALLFAREGAKVVVT 38 (280)
T ss_dssp EEEESSTTS-HHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 569999998 99999999999999888776
No 458
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=25.41 E-value=55 Score=25.97 Aligned_cols=18 Identities=11% Similarity=-0.014 Sum_probs=10.9
Q ss_pred HHHHHHHHHCCCeEEEcC
Q 045940 26 LDLATQLVERKINLVYGG 43 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GG 43 (189)
+++++.|+++|+.|+.-+
T Consensus 23 ~aia~~la~~G~~V~~~~ 40 (291)
T 1e7w_A 23 RSIAEGLHAEGYAVCLHY 40 (291)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEc
Confidence 355566666777766544
No 459
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=25.36 E-value=3.1e+02 Score=23.21 Aligned_cols=73 Identities=15% Similarity=0.062 Sum_probs=43.2
Q ss_pred cCeeE-EecCCcchHHHHHHHHHHHhcC-CCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHH
Q 045940 101 ADAFI-ALPGGYGTMEELLEMITWSQLG-IHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQG 178 (189)
Q Consensus 101 sda~I-~lpGG~GTL~El~~~~~~~~~~-~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~ 178 (189)
-|+++ .+.||+=.-+++.+.+.-..-. .+++||++--...-++.-.+.| .+.| -.++.++|++++.+.
T Consensus 318 v~~ilvni~ggi~~~d~vA~gii~a~~~~~~~~Pivvrl~G~n~~~g~~~L---~~~g-------l~~~~~~~~~~Aa~~ 387 (395)
T 2fp4_B 318 VEAILVNIFGGIVNCAIIANGITKACRELELKVPLVVRLEGTNVHEAQNIL---TNSG-------LPITSAVDLEDAAKK 387 (395)
T ss_dssp CCEEEEEEEESSSCHHHHHHHHHHHHHHHTCCSCEEEEEEETTHHHHHHHH---HHTC-------SCCEECSSHHHHHHH
T ss_pred CCEEEEEecCCccCcHHHHHHHHHHHHhcCCCCeEEEEcCCCCHHHHHHHH---HHCC-------CceEeCCCHHHHHHH
Confidence 35544 4668888888888765532211 2679999642221233333333 2333 145677999999998
Q ss_pred hhcCC
Q 045940 179 MEVPN 183 (189)
Q Consensus 179 l~~~~ 183 (189)
+.+..
T Consensus 388 ~v~~~ 392 (395)
T 2fp4_B 388 AVASV 392 (395)
T ss_dssp HHHTT
T ss_pred HHHHh
Confidence 76543
No 460
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=25.32 E-value=61 Score=24.65 Aligned_cols=31 Identities=29% Similarity=0.439 Sum_probs=26.8
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||.. |+=.++++.-.+.|.+|+.+.
T Consensus 6 k~vlITGas~-gIG~~~a~~l~~~G~~v~~~~ 36 (247)
T 3lyl_A 6 KVALVTGASR-GIGFEVAHALASKGATVVGTA 36 (247)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEEe
Confidence 3569999988 999999999999999988774
No 461
>3hno_A Pyrophosphate-dependent phosphofructokinase; structural genomics, PSI-2, protein structure initiative; 2.00A {Nitrosospira multiformis atcc 25196} PDB: 3k2q_A
Probab=25.29 E-value=38 Score=29.43 Aligned_cols=34 Identities=6% Similarity=0.160 Sum_probs=23.5
Q ss_pred HCCCeEEEcCCCCChhHHHHHHHHh----cCC---eEEEEe
Q 045940 34 ERKINLVYGGGSVGLMGLVSQTIFD----GGC---HVLGVI 67 (189)
Q Consensus 34 ~~g~~lv~GGg~~GlM~a~a~ga~~----~gg---~viGv~ 67 (189)
++++.|+++||++--|-|+.+|+.+ .|. +|+|+.
T Consensus 3 ~kni~VltsGGdapGmNa~Ir~vv~~a~~~g~~~~~V~Gi~ 43 (419)
T 3hno_A 3 AKNAFYAQSGGVTAVINASAAGVIEAARKQSGKIGRIYAGR 43 (419)
T ss_dssp CCEEEEEECSSCCSSHHHHHHHHHHHHHHHCSSCCCEEEET
T ss_pred CceEEEEccCCChHHHHHHHHHHHHHHHHcCCCCcEEEEEe
Confidence 4567788888887777776666553 455 788873
No 462
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=25.27 E-value=99 Score=28.90 Aligned_cols=46 Identities=15% Similarity=0.129 Sum_probs=37.6
Q ss_pred HHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 21 FSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 21 ~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
+-.-+.-+...|+..||.++++|.. =-.+.+.+.|.+.+..+||+.
T Consensus 609 HdiG~~iVa~~l~~~GfeVi~lG~~-v~~eeiv~aA~e~~adiVglS 654 (727)
T 1req_A 609 HDRGQKVIATAYADLGFDVDVGPLF-QTPEETARQAVEADVHVVGVS 654 (727)
T ss_dssp CCHHHHHHHHHHHHHTCEEEECCTT-BCHHHHHHHHHHTTCSEEEEE
T ss_pred hHHHHHHHHHHHHhCCeEEEeCCCC-CCHHHHHHHHHHcCCCEEEEe
Confidence 3345556777888899999999887 556888899999999999993
No 463
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=25.24 E-value=1.3e+02 Score=24.18 Aligned_cols=37 Identities=14% Similarity=0.097 Sum_probs=28.0
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGG 44 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg 44 (189)
|++|.++... ..-+......|++.|.++||.|..=.+
T Consensus 4 M~~il~~~~~----~~Ghv~~~~~La~~L~~~GheV~v~~~ 40 (402)
T 3ia7_A 4 QRHILFANVQ----GHGHVYPSLGLVSELARRGHRITYVTT 40 (402)
T ss_dssp CCEEEEECCS----SHHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CCEEEEEeCC----CCcccccHHHHHHHHHhCCCEEEEEcC
Confidence 5578777654 345677888999999999999776543
No 464
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=25.20 E-value=1.6e+02 Score=24.21 Aligned_cols=31 Identities=29% Similarity=0.276 Sum_probs=21.6
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
...+|+|+|+.|++ +.+-|+..|.+|+++..
T Consensus 196 ~~VlV~GaG~vG~~--aiqlak~~Ga~Vi~~~~ 226 (369)
T 1uuf_A 196 KKVGVVGIGGLGHM--GIKLAHAMGAHVVAFTT 226 (369)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHH--HHHHHHHCCCEEEEEeC
Confidence 45688888665654 44556777888888864
No 465
>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*
Probab=25.18 E-value=75 Score=23.97 Aligned_cols=32 Identities=16% Similarity=0.063 Sum_probs=18.5
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGG 44 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg 44 (189)
++|.|.|+++ -..+++.+.|+++|+.|+.-+.
T Consensus 8 k~vlITGasg--------giG~~~a~~l~~~G~~V~~~~r 39 (244)
T 3d3w_A 8 RRVLVTGAGK--------GIGRGTVQALHATGARVVAVSR 39 (244)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEES
T ss_pred cEEEEECCCc--------HHHHHHHHHHHHCCCEEEEEeC
Confidence 4566666654 2334556666667777665443
No 466
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=25.16 E-value=2e+02 Score=22.12 Aligned_cols=56 Identities=16% Similarity=0.067 Sum_probs=34.2
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc-CCCCChhHHHHHHHHhcCCeEEEEec
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYG-GGSVGLMGLVSQTIFDGGCHVLGVIP 68 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~G-Gg~~GlM~a~a~ga~~~gg~viGv~p 68 (189)
+++-|-|+++ -.-+.+++.|+++|+.|+.- .....--+.+.+...+.|+++..+.-
T Consensus 19 k~~lVTGas~--------gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 75 (270)
T 3is3_A 19 KVALVTGSGR--------GIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKA 75 (270)
T ss_dssp CEEEESCTTS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred CEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEc
Confidence 4566666654 23457788888999998763 33323344555555556777776643
No 467
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=25.06 E-value=1.7e+02 Score=22.43 Aligned_cols=41 Identities=24% Similarity=0.342 Sum_probs=23.9
Q ss_pred cCeeEEecCCcchHHHHHHHHHHH--hcCCCCCcEEEEeCCCCc
Q 045940 101 ADAFIALPGGYGTMEELLEMITWS--QLGIHDKPVGVLNVDGYY 142 (189)
Q Consensus 101 sda~I~lpGG~GTL~El~~~~~~~--~~~~~~kPiill~~~g~~ 142 (189)
.+..|.++|| -|+.++++.+.-. +-....+.+-++..+++|
T Consensus 28 ~~~~i~lsgG-~T~~~~~~~L~~~~~~~~~~~~~v~v~~lder~ 70 (242)
T 2bkx_A 28 PDAVLGLATG-GTPEGTYRQLIRLHQTENLSFQNITTVNLDEYA 70 (242)
T ss_dssp TTCEEEECCS-STTHHHHHHHHHHHHHSCCCCTTCEEEESEEET
T ss_pred CCeEEEECCC-CCHHHHHHHHHHHhhccCCChhheEEEeCcccc
Confidence 4578899888 5777777766522 112233455566555555
No 468
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=24.90 E-value=1.1e+02 Score=22.64 Aligned_cols=33 Identities=9% Similarity=-0.011 Sum_probs=16.1
Q ss_pred CeEEEEEcCCCC-CCChHHHHHHHHHHHHHHHCC
Q 045940 4 FKRVCVFCGSNS-GNRKIFSDAALDLATQLVERK 36 (189)
Q Consensus 4 ~~~I~V~g~s~~-~~~~~~~~~A~~lg~~la~~g 36 (189)
|++|.|+.+|.. +.+..-...|+.+.+.+.++|
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g 34 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETN 34 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 344544444433 223444566666666665544
No 469
>1wcv_1 SOJ, segregation protein; ATPase, bacterial, chromosome segregation; 1.6A {Thermus thermophilus} PDB: 2bej_A* 2bek_A*
Probab=24.85 E-value=1.2e+02 Score=23.34 Aligned_cols=37 Identities=16% Similarity=0.182 Sum_probs=25.1
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
.+++.|+|++. .. ..--.-.|..|+..||++|..++.
T Consensus 4 ~~~~vI~v~s~-kG--GvGKTt~a~~LA~~la~~g~~Vll 40 (257)
T 1wcv_1 4 AKVRRIALANQ-KG--GVGKTTTAINLAAYLARLGKRVLL 40 (257)
T ss_dssp -CCCEEEECCS-SC--CHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEEEeC-CC--CchHHHHHHHHHHHHHHCCCCEEE
Confidence 35667777643 33 344567888999999999877654
No 470
>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}
Probab=24.81 E-value=77 Score=24.85 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=24.8
Q ss_pred CCeEEEcCC--CCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGG--SVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg--~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||+ . |+=.++++...+.|.+|+.+-
T Consensus 22 k~vlVTGas~~~-gIG~~ia~~l~~~G~~V~~~~ 54 (285)
T 2p91_A 22 KRALITGVANER-SIAYGIAKSFHREGAQLAFTY 54 (285)
T ss_dssp CEEEECCCSSTT-SHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCCCC-cHHHHHHHHHHHcCCEEEEEe
Confidence 356899987 6 888899998888888887763
No 471
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=24.80 E-value=62 Score=25.36 Aligned_cols=27 Identities=22% Similarity=0.246 Sum_probs=13.2
Q ss_pred eEEEcCCCCChhHHHHHHHHhcCCeEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFDGGCHVLG 65 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~~gg~viG 65 (189)
.|||||+. |+=.++++...+.|.+|+.
T Consensus 30 vlVTGas~-gIG~aia~~la~~G~~V~~ 56 (266)
T 3grp_A 30 ALVTGATG-GIGEAIARCFHAQGAIVGL 56 (266)
T ss_dssp EEESSTTS-HHHHHHHHHHHHTTCEEEE
T ss_pred EEEeCCCc-HHHHHHHHHHHHCCCEEEE
Confidence 35555544 5555555554444444433
No 472
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=24.79 E-value=73 Score=25.05 Aligned_cols=29 Identities=21% Similarity=0.474 Sum_probs=15.2
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|-+|+.+
T Consensus 20 ~vlVTGasg-gIG~~la~~l~~~G~~V~~~ 48 (303)
T 1yxm_A 20 VAIVTGGAT-GIGKAIVKELLELGSNVVIA 48 (303)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 345555554 55555555555555554444
No 473
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=24.64 E-value=1.2e+02 Score=24.41 Aligned_cols=87 Identities=13% Similarity=0.051 Sum_probs=44.7
Q ss_pred CHHHHHHHHHH--hcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCC-----c-
Q 045940 89 DMHERKAEMAR--RADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIK-----S- 160 (189)
Q Consensus 89 ~~~~R~~~m~~--~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~-----~- 160 (189)
++.+=-+.+.+ ..++++...-++|+.+|....+--. ..+|||+++... -..+--. .+--.|-+- .
T Consensus 186 ~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~~k~G-~~~~~g~---~~~Htga~~~~~~g~~ 258 (288)
T 2nu8_A 186 NFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE---HVTKPVVGYIAG-VTAPKGK---RMGHAGAIIAGGKGTA 258 (288)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHH---HCCSCEEEEEEC-TTCCTTC---CCSSTTCCCCTTCCCH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEEEEeC-CCCcccc---cccchhhhhccCCccH
Confidence 34444444443 2446666767777877665444222 357999988542 1110000 000001110 0
Q ss_pred ------cccCcEEEeCCHHHHHHHhhcC
Q 045940 161 ------SARNIVISAKNARDLLQGMEVP 182 (189)
Q Consensus 161 ------~~~~~i~~~~~~ee~~~~l~~~ 182 (189)
-..--+..++|++|+.+.+++.
T Consensus 259 ~~~~aa~~~aGv~~~~~~~el~~~~~~~ 286 (288)
T 2nu8_A 259 DEKFAALEAAGVKTVRSLADIGEALKTV 286 (288)
T ss_dssp HHHHHHHHHTTCEECSSGGGHHHHHHHH
T ss_pred HHHHHHHHHCCCeEeCCHHHHHHHHHHH
Confidence 0112367899999999988764
No 474
>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*
Probab=24.63 E-value=87 Score=24.18 Aligned_cols=28 Identities=21% Similarity=0.175 Sum_probs=16.8
Q ss_pred eEEEcCC--CCChhHHHHHHHHhcCCeEEEE
Q 045940 38 NLVYGGG--SVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg--~~GlM~a~a~ga~~~gg~viGv 66 (189)
.|||||+ . |+=.++++...+.|.+|+.+
T Consensus 11 vlVTGas~~~-gIG~~ia~~l~~~G~~V~~~ 40 (261)
T 2wyu_A 11 ALVMGVTNQR-SLGFAIAAKLKEAGAEVALS 40 (261)
T ss_dssp EEEESCCSSS-SHHHHHHHHHHHHTCEEEEE
T ss_pred EEEECCCCCC-cHHHHHHHHHHHCCCEEEEE
Confidence 4666665 4 66666666666666665554
No 475
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=24.57 E-value=63 Score=24.87 Aligned_cols=28 Identities=14% Similarity=0.209 Sum_probs=15.1
Q ss_pred eEEEcCCCCChhHHHHHHHHh---cCCeEEEE
Q 045940 38 NLVYGGGSVGLMGLVSQTIFD---GGCHVLGV 66 (189)
Q Consensus 38 ~lv~GGg~~GlM~a~a~ga~~---~gg~viGv 66 (189)
.|||||+. |+=.++++...+ .|.+|+.+
T Consensus 9 ~lVTGas~-gIG~~ia~~l~~~~~~G~~V~~~ 39 (259)
T 1oaa_A 9 CVLTGASR-GFGRALAPQLARLLSPGSVMLVS 39 (259)
T ss_dssp EEESSCSS-HHHHHHHHHHHTTBCTTCEEEEE
T ss_pred EEEeCCCC-hHHHHHHHHHHHhhcCCCeEEEE
Confidence 45555555 555555555555 45555444
No 476
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=24.56 E-value=1.4e+02 Score=22.98 Aligned_cols=55 Identities=20% Similarity=0.158 Sum_probs=31.5
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
++|-|-|+++ -.-+.+++.|+++|+.|+.-+...---+.+.+...+.++++..+.
T Consensus 7 k~vlVTGas~--------gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 61 (257)
T 3imf_A 7 KVVIITGGSS--------GMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQ 61 (257)
T ss_dssp CEEEETTTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 4566666654 244577888899999987765542222223332333456666553
No 477
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=24.54 E-value=70 Score=24.37 Aligned_cols=33 Identities=18% Similarity=0.206 Sum_probs=20.0
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
++|-|.|+++ -.-+.+.+.|+++|+.|+.-+..
T Consensus 14 k~vlItGasg--------giG~~la~~l~~~G~~V~~~~r~ 46 (260)
T 3awd_A 14 RVAIVTGGAQ--------NIGLACVTALAEAGARVIIADLD 46 (260)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCc--------hHHHHHHHHHHHCCCEEEEEeCC
Confidence 4666777664 23446666677778776654443
No 478
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=24.54 E-value=1.6e+02 Score=22.65 Aligned_cols=31 Identities=19% Similarity=0.319 Sum_probs=26.5
Q ss_pred CCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 36 KINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
...|||||+. |+=.++++...+.|.+|+.+-
T Consensus 13 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~~ 43 (256)
T 3gaf_A 13 AVAIVTGAAA-GIGRAIAGTFAKAGASVVVTD 43 (256)
T ss_dssp CEEEECSCSS-HHHHHHHHHHHHHTCEEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 3569999988 999999999999999887763
No 479
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=24.52 E-value=49 Score=23.64 Aligned_cols=35 Identities=23% Similarity=0.234 Sum_probs=24.6
Q ss_pred HHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCe
Q 045940 28 LATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCH 62 (189)
Q Consensus 28 lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~ 62 (189)
+-+.+.......+|=+|+.+.|+++.+.+.+.|-+
T Consensus 99 l~~~~~~~~~~~vy~CGP~~Mm~av~~~l~~~~~~ 133 (142)
T 3lyu_A 99 VRELLESEDWDLVFMVGPVGDQKQVFEVVKEYGVP 133 (142)
T ss_dssp HHHHHHSSCCSEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred HHHhcccCCCCEEEEECCHHHHHHHHHHHHHcCCc
Confidence 44444444556666667779999999998887743
No 480
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=24.43 E-value=59 Score=25.98 Aligned_cols=29 Identities=14% Similarity=0.169 Sum_probs=18.2
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 28 ~vlVTGas~-gIG~aia~~L~~~G~~V~~~ 56 (297)
T 1xhl_A 28 SVIITGSSN-GIGRSAAVIFAKEGAQVTIT 56 (297)
T ss_dssp EEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 456666665 66666666666666665554
No 481
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=24.42 E-value=64 Score=24.97 Aligned_cols=55 Identities=16% Similarity=0.112 Sum_probs=33.6
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCCCChhHHHHHHHHhcCCeEEEEe
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGSVGLMGLVSQTIFDGGCHVLGVI 67 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~~GlM~a~a~ga~~~gg~viGv~ 67 (189)
++|-|.|+++ -.-+.+++.|+++|+.|+.-+...--.+.+.+...+.++.+..+.
T Consensus 30 k~vlITGas~--------gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 84 (262)
T 3rkr_A 30 QVAVVTGASR--------GIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHA 84 (262)
T ss_dssp CEEEESSTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEE
Confidence 5677777764 244577788889999988766552233333343444566665553
No 482
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=24.40 E-value=85 Score=24.54 Aligned_cols=44 Identities=18% Similarity=0.298 Sum_probs=30.4
Q ss_pred HHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCc
Q 045940 96 EMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYY 142 (189)
Q Consensus 96 ~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~ 142 (189)
.+.+...+.|+|+|| .|...+++.+.- .+..-+.+.+++.+.||
T Consensus 29 ~i~~~~~~~l~lsgG-stp~~~y~~L~~--~~i~w~~v~~f~~DEr~ 72 (232)
T 3lhi_A 29 ALDEKGGAVLAVSGG-RSPIAFFNALSQ--KDLDWKNVGITLADERI 72 (232)
T ss_dssp HHHHHSCEEEEECCS-STTHHHHHHHHT--SCCCGGGEEEEESEEES
T ss_pred HHHhCCCEEEEEeCC-CCHHHHHHHHHh--cCCCchheEEEEeeecc
Confidence 344667899999999 477777777752 22334667777776666
No 483
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=24.37 E-value=1.2e+02 Score=23.29 Aligned_cols=34 Identities=3% Similarity=0.018 Sum_probs=21.9
Q ss_pred CCCeEEEEEcCCCC--CCChHHHHHHHHHHHHHHHC
Q 045940 2 GKFKRVCVFCGSNS--GNRKIFSDAALDLATQLVER 35 (189)
Q Consensus 2 ~~~~~I~V~g~s~~--~~~~~~~~~A~~lg~~la~~ 35 (189)
|.|++|.++-||-. +.++.-.+.++.+.+.+.++
T Consensus 2 ~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~ 37 (223)
T 3u7i_A 2 NAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKEL 37 (223)
T ss_dssp -CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHH
T ss_pred CccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHh
Confidence 56778877776643 23555567777777777664
No 484
>4f3r_A Phosphopantetheine adenylyltransferase; phosphopantetheine adenylyltranferase; 2.25A {Coxiella burnetii}
Probab=24.37 E-value=58 Score=24.19 Aligned_cols=27 Identities=11% Similarity=0.092 Sum_probs=18.0
Q ss_pred CCCeEEEEEcCCCCCCChHHHHHHHHH
Q 045940 2 GKFKRVCVFCGSNSGNRKIFSDAALDL 28 (189)
Q Consensus 2 ~~~~~I~V~g~s~~~~~~~~~~~A~~l 28 (189)
+.|++|++|+||=++.+.-+...+++.
T Consensus 2 ~~mm~i~i~~GsFDPiH~GHl~li~~A 28 (162)
T 4f3r_A 2 NAMKPIAIYPGTFDPLTNGHVDIIERA 28 (162)
T ss_dssp ---CCEEEEEECCTTCCHHHHHHHHHH
T ss_pred CCceEEEEEEEEcCCCCHHHHHHHHHH
Confidence 467889999999887776666655543
No 485
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=24.32 E-value=60 Score=25.29 Aligned_cols=9 Identities=11% Similarity=0.486 Sum_probs=5.5
Q ss_pred CHHHHHHHh
Q 045940 171 NARDLLQGM 179 (189)
Q Consensus 171 ~~ee~~~~l 179 (189)
+|||+.+.+
T Consensus 239 ~p~dvA~~i 247 (271)
T 4iin_A 239 SAKEVAEAV 247 (271)
T ss_dssp CHHHHHHHH
T ss_pred CHHHHHHHH
Confidence 566666654
No 486
>3h05_A Uncharacterized protein VPA0413; nucleotidylyl, transferase, MCSG, midwest center for structu genomics, PSI; 1.65A {Vibrio parahaemolyticus}
Probab=24.28 E-value=47 Score=25.00 Aligned_cols=23 Identities=9% Similarity=0.092 Sum_probs=18.3
Q ss_pred CeEEEEEcCCCCCCChHHHHHHH
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAAL 26 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~ 26 (189)
|++|+|||||=++...-+...|+
T Consensus 1 M~~igi~gGsFdPih~GHl~i~~ 23 (177)
T 3h05_A 1 MKKIAIFGSAFNPPSLGHKSVIE 23 (177)
T ss_dssp CCEEEEEEECCSSCCHHHHHHHT
T ss_pred CcEEEEEEeccchhhHHHHHHHH
Confidence 57899999998877777776664
No 487
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=24.27 E-value=66 Score=25.04 Aligned_cols=38 Identities=11% Similarity=0.074 Sum_probs=24.0
Q ss_pred HHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeC
Q 045940 96 EMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNV 138 (189)
Q Consensus 96 ~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~ 138 (189)
++....|++|+.|-....+++....+. ..+.|+++++.
T Consensus 57 l~~~~vdgiii~~~~~~~~~~~~~~~~-----~~giPvV~~~~ 94 (297)
T 3rot_A 57 ALATYPSGIATTIPSDTAFSKSLQRAN-----KLNIPVIAVDT 94 (297)
T ss_dssp HHHTCCSEEEECCCCSSTTHHHHHHHH-----HHTCCEEEESC
T ss_pred HHHcCCCEEEEeCCCHHHHHHHHHHHH-----HCCCCEEEEcC
Confidence 344567888888776665555554432 24678888764
No 488
>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2
Probab=24.14 E-value=65 Score=24.58 Aligned_cols=18 Identities=11% Similarity=0.028 Sum_probs=10.0
Q ss_pred HHHHHHHHHCCCeEEEcC
Q 045940 26 LDLATQLVERKINLVYGG 43 (189)
Q Consensus 26 ~~lg~~la~~g~~lv~GG 43 (189)
+++.+.|+++|+.|+.-+
T Consensus 28 ~~~a~~l~~~G~~V~~~~ 45 (265)
T 1h5q_A 28 LAFTRAVAAAGANVAVIY 45 (265)
T ss_dssp HHHHHHHHHTTEEEEEEE
T ss_pred HHHHHHHHHCCCeEEEEe
Confidence 355555566666655443
No 489
>3p9y_A CG14216, LD40846P; phosphatase, CIS proline, LMW PTP-like fold, RNA polymerase hydrolase; HET: N7P SEP SET IMD PG4; 2.10A {Drosophila melanogaster} PDB: 3fdf_A 3fmv_A 3omx_A 3omw_A
Probab=24.13 E-value=1.1e+02 Score=23.94 Aligned_cols=34 Identities=24% Similarity=0.303 Sum_probs=24.2
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE-cCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY-GGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~-GGg~ 45 (189)
.++||.|+|+.. +.-+.=+.|.++|+.|.+ |-|.
T Consensus 10 l~~avVCaSN~N-------RSMEaH~~L~k~G~~V~SfGTGs 44 (198)
T 3p9y_A 10 LAVAVVDSSNMN-------RSMEAHNFLAKKGFNVRSYGTGE 44 (198)
T ss_dssp CEEEEEESSSSS-------HHHHHHHHHHHTTCEEEEEECSS
T ss_pred ceEEEEcCCCCc-------ccHHHHHHHHhCCCceeecCCCc
Confidence 599999999763 223445678889999875 4444
No 490
>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*
Probab=24.12 E-value=60 Score=28.00 Aligned_cols=30 Identities=30% Similarity=0.349 Sum_probs=24.6
Q ss_pred CCeEEEcCCCCChhHH--HHHHHHhcCCeEEEE
Q 045940 36 KINLVYGGGSVGLMGL--VSQTIFDGGCHVLGV 66 (189)
Q Consensus 36 g~~lv~GGg~~GlM~a--~a~ga~~~gg~viGv 66 (189)
...|||||+. |+=.| +++...+.|..|+.+
T Consensus 61 K~aLVTGass-GIG~A~aia~ala~~Ga~Vi~~ 92 (418)
T 4eue_A 61 KKVLIVGASS-GFGLATRISVAFGGPEAHTIGV 92 (418)
T ss_dssp SEEEEESCSS-HHHHHHHHHHHHSSSCCEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHHHhCCCEEEEE
Confidence 3569999988 99888 888777779898877
No 491
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=24.03 E-value=1.7e+02 Score=23.04 Aligned_cols=75 Identities=16% Similarity=0.082 Sum_probs=44.6
Q ss_pred cCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCC----CchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHH
Q 045940 101 ADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDG----YYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLL 176 (189)
Q Consensus 101 sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g----~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~ 176 (189)
+.+++|...+.||++++..++...+-.-.+ -=+++|.-. +.+....+|++.- .......+.+..|.+.++
T Consensus 162 ~pVILV~~~~lg~i~~~~lt~~~l~~~g~~-~GvIlN~v~~~~~~~~~~~p~le~~~-----~~~~~~~~~~~~~~~~l~ 235 (242)
T 3qxc_A 162 AKMLLISHDNLGLINDCLLNDFLLKSHQLD-YKIAINLKGNNTAFHSISLPYIELFN-----TRSNNPIVIFQQSLKVLM 235 (242)
T ss_dssp CEEEEEECCSTTHHHHHHHHHHHHHTSSSC-EEEEECCCTTCCHHHHHTHHHHHHHH-----HHCSSCCEEGGGCHHHHH
T ss_pred CCEEEEEcCCCcHHHHHHHHHHHHHhCCCC-EEEEEeCCCCccchhhhhHHHHHHhc-----CcccCCceeccccHHHHH
Confidence 447888888899999988777655422223 334666421 2222333443211 123457788999999888
Q ss_pred HHhhc
Q 045940 177 QGMEV 181 (189)
Q Consensus 177 ~~l~~ 181 (189)
+.+-+
T Consensus 236 ~~~~~ 240 (242)
T 3qxc_A 236 SFALK 240 (242)
T ss_dssp HHHHS
T ss_pred HHHhc
Confidence 77643
No 492
>1vht_A Dephospho-COA kinase; structural genomics, transferase; HET: BA3; 1.59A {Escherichia coli} SCOP: c.37.1.1 PDB: 1vhl_A* 1viy_A 1t3h_A 1n3b_A
Probab=24.01 E-value=71 Score=23.83 Aligned_cols=34 Identities=24% Similarity=0.270 Sum_probs=23.9
Q ss_pred CCCCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEc
Q 045940 1 MGKFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYG 42 (189)
Q Consensus 1 ~~~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~G 42 (189)
|++.+.|+|.|.+..|.+ .+++.|++.|+.++..
T Consensus 1 M~~~~~I~i~G~~GSGKS--------T~~~~L~~lg~~~id~ 34 (218)
T 1vht_A 1 MSLRYIVALTGGIGSGKS--------TVANAFADLGINVIDA 34 (218)
T ss_dssp -CCCEEEEEECCTTSCHH--------HHHHHHHHTTCEEEEH
T ss_pred CCCceEEEEECCCCCCHH--------HHHHHHHHcCCEEEEc
Confidence 777789999998877632 3556666678887765
No 493
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=24.00 E-value=2.6e+02 Score=21.92 Aligned_cols=41 Identities=12% Similarity=0.093 Sum_probs=27.0
Q ss_pred CCeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcC
Q 045940 3 KFKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGG 43 (189)
Q Consensus 3 ~~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GG 43 (189)
+.++|+|+.......++-+.+....+-+.+.++||.++.--
T Consensus 60 ~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~ 100 (338)
T 3dbi_A 60 STQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLAD 100 (338)
T ss_dssp CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEe
Confidence 34678887765323356666777777777788888866543
No 494
>1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.97 E-value=76 Score=23.74 Aligned_cols=26 Identities=35% Similarity=0.428 Sum_probs=11.7
Q ss_pred EEEcCCCCChhHHHHHHHHhcCCeEEE
Q 045940 39 LVYGGGSVGLMGLVSQTIFDGGCHVLG 65 (189)
Q Consensus 39 lv~GGg~~GlM~a~a~ga~~~gg~viG 65 (189)
|||||.. |+=.++++...+.|-+|+.
T Consensus 6 lVtGasg-giG~~la~~l~~~G~~V~~ 31 (242)
T 1uay_A 6 LVTGGAS-GLGRAAALALKARGYRVVV 31 (242)
T ss_dssp EEETTTS-HHHHHHHHHHHHHTCEEEE
T ss_pred EEeCCCC-hHHHHHHHHHHHCCCEEEE
Confidence 4444443 4444444444444444443
No 495
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=23.92 E-value=1.7e+02 Score=19.68 Aligned_cols=51 Identities=18% Similarity=0.199 Sum_probs=29.7
Q ss_pred CCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccccCcEEEeCCHHHHHHHhhcCC
Q 045940 128 IHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSARNIVISAKNARDLLQGMEVPN 183 (189)
Q Consensus 128 ~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~~~ee~~~~l~~~~ 183 (189)
..+||++++-..---++.-+|-....++|. .-.+.-..||||+-+...+|.
T Consensus 49 dngkplvvfvngasqndvnefqneakkegv-----sydvlkstdpeeltqrvrefl 99 (112)
T 2lnd_A 49 DNGKPLVVFVNGASQNDVNEFQNEAKKEGV-----SYDVLKSTDPEELTQRVREFL 99 (112)
T ss_dssp TCCSCEEEEECSCCHHHHHHHHHHHHHHTC-----EEEEEECCCHHHHHHHHHHHH
T ss_pred hcCCeEEEEecCcccccHHHHHHHHHhcCc-----chhhhccCCHHHHHHHHHHHH
Confidence 578999866322233444444444455542 112445679999988877653
No 496
>3l2b_A Probable manganase-dependent inorganic pyrophosphatase; family II, CBS domain, bateman domain, AP4A, diadenosine polyphosphate, DRTGG; HET: B4P; 2.27A {Clostridium perfringens} PDB: 3l31_A*
Probab=23.91 E-value=77 Score=24.16 Aligned_cols=93 Identities=16% Similarity=0.155 Sum_probs=51.5
Q ss_pred eEEecCCHHHHHHHHHHhcCeeEEecCCcchHHHHHHHHHHHhcCCCCCcEEEEeCCCCchHHHHHHHHHHHcCCCCccc
Q 045940 83 DVLIVSDMHERKAEMARRADAFIALPGGYGTMEELLEMITWSQLGIHDKPVGVLNVDGYYDSLLRFFDKGVEEGFIKSSA 162 (189)
Q Consensus 83 ~~~~~~~~~~R~~~m~~~sda~I~lpGG~GTL~El~~~~~~~~~~~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~ 162 (189)
.++++.+-.+....+++..-.++++.||...-+++..... ..+.|++.-..+ .+.-.......+.-+..+.++.
T Consensus 122 ~ivIvgdr~~~~~~~i~~~~~~liit~~~~~~~~v~~~a~-----~~~~~~i~t~~d-~~~~~~~~~~~~~v~~im~~~~ 195 (245)
T 3l2b_A 122 DIAIAGDRAEIQAELIELKVSLLIVTGGHTPSKEIIELAK-----KNNITVITTPHD-SFTASRLIVQSLPVDYVMTKDN 195 (245)
T ss_dssp CEEEECSCHHHHHHHHHTTCSEEEECTTCCCCHHHHHHHH-----HHTCEEEECSSC-HHHHHHHGGGGSBHHHHSBCTT
T ss_pred CEEEECCCHHHHHHHHHcCCCEEEECCCCCCCHHHHHHHH-----HcCCeEEEeCCC-hHHHHHHHhcCCceeeEecCCc
Confidence 4555666667777778888889999999998888877764 234566543322 2221111001110011222223
Q ss_pred cCcEEEeCCHHHHHHHhhc
Q 045940 163 RNIVISAKNARDLLQGMEV 181 (189)
Q Consensus 163 ~~~i~~~~~~ee~~~~l~~ 181 (189)
...+.-.++.+++++.+.+
T Consensus 196 ~~~~~~~~~~~~~~~~m~~ 214 (245)
T 3l2b_A 196 LVAVSTDDLVEDVKVTMSE 214 (245)
T ss_dssp CCCEETTSBHHHHHHHHHH
T ss_pred cEEECCCCcHHHHHHHHHh
Confidence 3445555667777777754
No 497
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=23.90 E-value=2.4e+02 Score=21.43 Aligned_cols=29 Identities=24% Similarity=0.398 Sum_probs=25.0
Q ss_pred CeEEEcCCCCChhHHHHHHHHhcCCeEEEE
Q 045940 37 INLVYGGGSVGLMGLVSQTIFDGGCHVLGV 66 (189)
Q Consensus 37 ~~lv~GGg~~GlM~a~a~ga~~~gg~viGv 66 (189)
..|||||.. |+=.++++...+.|.+|+.+
T Consensus 4 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 32 (256)
T 1geg_A 4 VALVTGAGQ-GIGKAIALRLVKDGFAVAIA 32 (256)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 468999988 99999999988888888776
No 498
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=23.88 E-value=30 Score=26.38 Aligned_cols=18 Identities=11% Similarity=0.324 Sum_probs=9.3
Q ss_pred hhHHHHHHHHhcCCeEEE
Q 045940 48 LMGLVSQTIFDGGCHVLG 65 (189)
Q Consensus 48 lM~a~a~ga~~~gg~viG 65 (189)
.+..+.+-..+.|..+++
T Consensus 123 a~~~l~~~L~~~Ga~~v~ 140 (191)
T 1bvy_F 123 VPAFIDETLAAKGAENIA 140 (191)
T ss_dssp HHHHHHHHHHTTTCCCCE
T ss_pred HHHHHHHHHHHCCCeEee
Confidence 455555544455655544
No 499
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=23.87 E-value=90 Score=22.70 Aligned_cols=35 Identities=23% Similarity=0.374 Sum_probs=22.9
Q ss_pred CeEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEE
Q 045940 4 FKRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVY 41 (189)
Q Consensus 4 ~~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~ 41 (189)
|+.|+|++. ..+... .-.|..|+..||++|..++.
T Consensus 1 M~vi~v~s~-kgG~GK--Tt~a~~la~~la~~g~~vll 35 (206)
T 4dzz_A 1 MKVISFLNP-KGGSGK--TTAVINIATALSRSGYNIAV 35 (206)
T ss_dssp CEEEEECCS-STTSSH--HHHHHHHHHHHHHTTCCEEE
T ss_pred CeEEEEEeC-CCCccH--HHHHHHHHHHHHHCCCeEEE
Confidence 567777644 334343 36778899999998876443
No 500
>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2
Probab=23.86 E-value=83 Score=23.68 Aligned_cols=33 Identities=15% Similarity=0.032 Sum_probs=20.5
Q ss_pred eEEEEEcCCCCCCChHHHHHHHHHHHHHHHCCCeEEEcCCC
Q 045940 5 KRVCVFCGSNSGNRKIFSDAALDLATQLVERKINLVYGGGS 45 (189)
Q Consensus 5 ~~I~V~g~s~~~~~~~~~~~A~~lg~~la~~g~~lv~GGg~ 45 (189)
++|-|.|+++ -..+.+.+.|+++|+.|+.-+..
T Consensus 8 ~~vlVTGasg--------giG~~~a~~l~~~G~~V~~~~r~ 40 (244)
T 1cyd_A 8 LRALVTGAGK--------GIGRDTVKALHASGAKVVAVTRT 40 (244)
T ss_dssp CEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESC
T ss_pred CEEEEeCCCc--------hHHHHHHHHHHHCCCEEEEEeCC
Confidence 4677777764 23446667777778876654433
Done!