BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>045941
FNFTPDEDDMSSGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAEGRSRGGQTRKEQL
GTEGYQEMGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS

High Scoring Gene Products

Symbol, full name Information P value
EMP1
Embryonic abundant protein 1
protein from Oryza sativa Japonica Group 5.3e-24
GEA6
AT2G40170
protein from Arabidopsis thaliana 7.8e-23
EM1
AT3G51810
protein from Arabidopsis thaliana 1.6e-15

Back to top

Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  045941
        (102 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

UNIPROTKB|P46520 - symbol:EMP1 "Embryonic abundant protei...   275  5.3e-24   1
TAIR|locus:2065041 - symbol:GEA6 "AT2G40170" species:3702...   264  7.8e-23   1
TAIR|locus:2074383 - symbol:EM1 "AT3G51810" species:3702 ...   195  1.6e-15   1


>UNIPROTKB|P46520 [details] [associations]
            symbol:EMP1 "Embryonic abundant protein 1" species:39947
            "Oryza sativa Japonica Group" [GO:0009737 "response to abscisic
            acid stimulus" evidence=IEP] GO:GO:0009737 EMBL:AC136221
            HOGENOM:HOG000201826 InterPro:IPR022377 InterPro:IPR000389
            Pfam:PF00477 PROSITE:PS00431 eggNOG:NOG319720 GO:GO:0048700
            EMBL:X63126 EMBL:U22102 PIR:S22483 RefSeq:NP_001055273.1
            UniGene:Os.12812 STRING:P46520 PRIDE:P46520
            EnsemblPlants:LOC_Os05g28210.1 GeneID:4338499
            KEGG:dosa:Os05t0349800-01 KEGG:osa:4338499 Gramene:P46520
            OMA:DIDESKY Uniprot:P46520
        Length = 95

 Score = 275 (101.9 bits), Expect = 5.3e-24, P = 5.3e-24
 Identities = 61/96 (63%), Positives = 71/96 (73%)

Query:    10 MSSGQE---RAELDAKARXXXXXXXXXXXXKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQ 66
             M+SGQ+   R+ELD  AR            KS EAQE+LAEGRSRGGQTRKEQ+G EGY+
Sbjct:     1 MASGQQQQGRSELDRMAREGQTVVPGGTGGKSLEAQENLAEGRSRGGQTRKEQMGEEGYR 60

Query:    67 EMGGKGGLSTGDQSGRERAAQEWGIDVNESKVTTTS 102
             EMG KGGLSTGD+SG ERAA+E GID++ESK  T S
Sbjct:    61 EMGRKGGLSTGDESGGERAARE-GIDIDESKYKTKS 95


>TAIR|locus:2065041 [details] [associations]
            symbol:GEA6 "AT2G40170" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0048316 "seed development"
            evidence=IMP] [GO:0048700 "acquisition of desiccation tolerance in
            seed" evidence=IMP] [GO:0009640 "photomorphogenesis" evidence=RCA]
            [GO:0009737 "response to abscisic acid stimulus" evidence=RCA;TAS]
            [GO:0009793 "embryo development ending in seed dormancy"
            evidence=RCA] [GO:0009845 "seed germination" evidence=RCA]
            [GO:0009909 "regulation of flower development" evidence=RCA]
            [GO:0009933 "meristem structural organization" evidence=RCA]
            [GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
            "sugar mediated signaling pathway" evidence=RCA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA] [GO:0016114 "terpenoid biosynthetic process"
            evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
            [GO:0019915 "lipid storage" evidence=RCA] [GO:0050826 "response to
            freezing" evidence=RCA] GO:GO:0009737 EMBL:CP002685
            GenomeReviews:CT485783_GR EMBL:AF085279 HOGENOM:HOG000201826
            InterPro:IPR022377 InterPro:IPR000389 Pfam:PF00477 PROSITE:PS00431
            EMBL:Z11923 EMBL:Z11924 EMBL:X66023 EMBL:AF360157 EMBL:AY113885
            IPI:IPI00548376 PIR:S34802 RefSeq:NP_181546.1 UniGene:At.25587
            STRING:Q02973 PaxDb:Q02973 PRIDE:Q02973 ProMEX:Q02973
            EnsemblPlants:AT2G40170.1 GeneID:818608 KEGG:ath:AT2G40170
            TAIR:At2g40170 eggNOG:NOG319720 InParanoid:Q02973 OMA:GKSFEAQ
            PhylomeDB:Q02973 ProtClustDB:CLSN2913055 Genevestigator:Q02973
            GermOnline:AT2G40170 GO:GO:0048700 Uniprot:Q02973
        Length = 92

 Score = 264 (98.0 bits), Expect = 7.8e-23, P = 7.8e-23
 Identities = 54/91 (59%), Positives = 67/91 (73%)

Query:    10 MSSGQERAELDAKARXXXXXXXXXXXXKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMG 69
             M+S QE+ +LD +A+            KS EAQ+HLAEGRSRGGQTRKEQLGTEGYQ+MG
Sbjct:     1 MASQQEKKQLDERAKKGETVVPGGTGGKSFEAQQHLAEGRSRGGQTRKEQLGTEGYQQMG 60

Query:    70 GKGGLSTGDQSGRERAAQEWGIDVNESKVTT 100
              KGGLSTGD+ G E A +E G++++ESK  T
Sbjct:    61 RKGGLSTGDKPGGEHAEEE-GVEIDESKFRT 90


>TAIR|locus:2074383 [details] [associations]
            symbol:EM1 "AT3G51810" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=RCA;TAS] [GO:0009640 "photomorphogenesis"
            evidence=RCA] [GO:0009737 "response to abscisic acid stimulus"
            evidence=RCA;TAS] [GO:0009845 "seed germination" evidence=RCA]
            [GO:0009909 "regulation of flower development" evidence=RCA]
            [GO:0009933 "meristem structural organization" evidence=RCA]
            [GO:0010162 "seed dormancy process" evidence=RCA] [GO:0010182
            "sugar mediated signaling pathway" evidence=RCA] [GO:0010228
            "vegetative to reproductive phase transition of meristem"
            evidence=RCA] [GO:0016567 "protein ubiquitination" evidence=RCA]
            [GO:0019915 "lipid storage" evidence=RCA] [GO:0048825 "cotyledon
            development" evidence=RCA] [GO:0050826 "response to freezing"
            evidence=RCA] [GO:0051301 "cell division" evidence=RCA]
            GO:GO:0009737 EMBL:CP002686 GenomeReviews:BA000014_GR EMBL:AF049236
            EMBL:Z11158 EMBL:Z11921 EMBL:BT004105 EMBL:BT005464 IPI:IPI00526670
            PIR:S34819 RefSeq:NP_190749.1 UniGene:At.35352 STRING:Q07187
            PaxDb:Q07187 PRIDE:Q07187 ProMEX:Q07187 EnsemblPlants:AT3G51810.1
            GeneID:824344 KEGG:ath:AT3G51810 TAIR:At3g51810 eggNOG:COG3729
            HOGENOM:HOG000201826 InParanoid:Q07187 OMA:SEQLGHE PhylomeDB:Q07187
            ProtClustDB:CLSN2683393 Genevestigator:Q07187 GermOnline:AT3G51810
            InterPro:IPR022377 InterPro:IPR000389 Pfam:PF00477 PROSITE:PS00431
            Uniprot:Q07187
        Length = 152

 Score = 195 (73.7 bits), Expect = 1.6e-15, P = 1.6e-15
 Identities = 47/89 (52%), Positives = 55/89 (61%)

Query:    10 MSSGQ-ERAELDAKARXXXXXXXXXXXXKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEM 68
             M+S Q  R ELD KA+             S EAQEHLAEGRS+GGQTRKEQLG EGYQE+
Sbjct:     1 MASKQLSREELDEKAKQGETVVPGGTGGHSLEAQEHLAEGRSKGGQTRKEQLGHEGYQEI 60

Query:    69 GGKGGLSTGDQSGRERAAQEWGIDVNESK 97
             G KGG +  +Q G E   QE G    E++
Sbjct:    61 GHKGGEARKEQLGHE-GYQEMGHKGGEAR 88

 Score = 161 (61.7 bits), Expect = 6.4e-12, P = 6.4e-12
 Identities = 35/63 (55%), Positives = 44/63 (69%)

Query:    37 KSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMGGKGGLSTGDQSGRERAAQEWGIDVNES 96
             K     E   E   +GG+ RKEQLG EGY+EMG KGGLST ++SG ERA +E GI+++ES
Sbjct:    89 KEQLGHEGYQEMGHKGGEARKEQLGHEGYKEMGRKGGLSTMEKSGGERAEEE-GIEIDES 147

Query:    97 KVT 99
             K T
Sbjct:   148 KFT 150

 Score = 115 (45.5 bits), Expect = 4.8e-07, P = 4.8e-07
 Identities = 30/79 (37%), Positives = 38/79 (48%)

Query:    19 LDAKARXXXXXXXXXXXXKSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMGGKGGLSTGD 78
             L+A+              K     E   E   +GG+ RKEQLG EGYQEMG KGG +  +
Sbjct:    31 LEAQEHLAEGRSKGGQTRKEQLGHEGYQEIGHKGGEARKEQLGHEGYQEMGHKGGEARKE 90

Query:    79 QSGRERAAQEWGIDVNESK 97
             Q G E   QE G    E++
Sbjct:    91 QLGHE-GYQEMGHKGGEAR 108

 Score = 110 (43.8 bits), Expect = 1.6e-06, P = 1.6e-06
 Identities = 24/47 (51%), Positives = 28/47 (59%)

Query:    37 KSPEAQEHLAEGRSRGGQTRKEQLGTEGYQEMGGKGGLSTGDQSGRE 83
             K     E   E   +GG+ RKEQLG EGYQEMG KGG +  +Q G E
Sbjct:    69 KEQLGHEGYQEMGHKGGEARKEQLGHEGYQEMGHKGGEARKEQLGHE 115


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.303   0.124   0.340    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      102        90   0.00091  102 3  11 23  0.49    30
                                                     29  0.39    31


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  3
  No. of states in DFA:  473 (50 KB)
  Total size of DFA:  95 KB (2070 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  10.05u 0.11s 10.16t   Elapsed:  00:00:00
  Total cpu time:  10.05u 0.11s 10.16t   Elapsed:  00:00:00
  Start:  Fri May 10 11:32:59 2013   End:  Fri May 10 11:32:59 2013

Back to top