Query 045941
Match_columns 102
No_of_seqs 47 out of 49
Neff 1.8
Searched_HMMs 13730
Date Mon Mar 25 12:11:01 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045941.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/045941hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1ldda_ a.4.5.34 (A:) Anaphase 20.7 30 0.0022 20.9 2.4 21 13-33 48-69 (74)
2 d2frna1 c.66.1.47 (A:19-278) H 14.0 28 0.002 23.5 1.1 27 15-41 97-125 (260)
3 d2fuea1 c.108.1.10 (A:13-256) 11.2 71 0.0052 18.2 2.2 34 12-47 20-53 (244)
4 d1s1ma1 c.23.16.1 (A:287-544) 11.0 66 0.0048 22.8 2.4 20 28-47 61-80 (258)
5 d1t8ka_ a.28.1.1 (A:) Acyl car 10.1 35 0.0025 18.8 0.4 16 83-98 44-59 (77)
6 d2qv7a1 e.52.1.2 (A:1-312) Dia 9.6 37 0.0027 22.2 0.5 8 28-35 88-95 (312)
7 d1qora2 c.2.1.1 (A:113-291) Qu 9.3 20 0.0015 21.5 -0.9 20 23-42 26-46 (179)
8 d1bjna_ c.67.1.4 (A:) Phosphos 9.3 27 0.002 21.9 -0.3 9 1-9 3-11 (360)
9 d1xxxa1 c.1.10.1 (A:5-300) Dih 8.9 1.3E+02 0.0098 19.5 3.2 11 16-26 31-41 (296)
10 d1s0yb_ d.80.1.1 (B:) Trans-3- 8.3 34 0.0025 20.1 -0.2 8 54-61 13-20 (55)
No 1
>d1ldda_ a.4.5.34 (A:) Anaphase promoting complex (APC) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=20.71 E-value=30 Score=20.86 Aligned_cols=21 Identities=24% Similarity=0.336 Sum_probs=17.4
Q ss_pred hhhHHHHHHHHhcCCcc-ccCC
Q 045941 13 GQERAELDAKARQGQTV-VPGG 33 (102)
Q Consensus 13 ~q~r~eLd~rAr~GeTV-VpgG 33 (102)
.|-+.=|+.++++|.-+ |+||
T Consensus 48 ~eL~~FL~~~V~e~kL~~v~gG 69 (74)
T d1ldda_ 48 QQLEGYLNTLADEGRLKYIANG 69 (74)
T ss_dssp HHHHHHHHHHHHTTSEECCTTT
T ss_pred HHHHHHHHHHHhcCceEEecCC
Confidence 45799999999999884 6787
No 2
>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}
Probab=14.01 E-value=28 Score=23.51 Aligned_cols=27 Identities=30% Similarity=0.358 Sum_probs=22.2
Q ss_pred hHHHHHHHHhcCCcccc--CCCCCCCHHH
Q 045941 15 ERAELDAKARQGQTVVP--GGTGGKSPEA 41 (102)
Q Consensus 15 ~r~eLd~rAr~GeTVVp--gGTGGksleA 41 (102)
+|..|-...+.|++|+= .|+|..|+.|
T Consensus 97 er~ri~~~~~~g~~VlD~~aG~G~~~l~~ 125 (260)
T d2frna1 97 ERVRMAKVAKPDELVVDMFAGIGHLSLPI 125 (260)
T ss_dssp HHHHHHHHCCTTCEEEETTCTTTTTHHHH
T ss_pred HHHHHHhhcCCccEEEECcceEcHHHHHH
Confidence 68888888999999975 6788888765
No 3
>d2fuea1 c.108.1.10 (A:13-256) Phosphomannomutase 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=11.17 E-value=71 Score=18.15 Aligned_cols=34 Identities=21% Similarity=0.104 Sum_probs=25.2
Q ss_pred hhhhHHHHHHHHhcCCccccCCCCCCCHHHHHHHHh
Q 045941 12 SGQERAELDAKARQGQTVVPGGTGGKSPEAQEHLAE 47 (102)
Q Consensus 12 s~q~r~eLd~rAr~GeTVVpgGTGGksleAQe~LAE 47 (102)
|...++.|.+..+.|-.||. |||....+...+++
T Consensus 20 s~~~~~~i~~l~~~g~~~i~--tgrr~~~~~~~~~~ 53 (244)
T d2fuea1 20 DPEVAAFLQKLRSRVQIGVV--GGSDYCKIAEQLGD 53 (244)
T ss_dssp CHHHHHHHHHHTTTSEEEEE--CSSCHHHHHHHHSS
T ss_pred CHHHHHHHHHHHhCCCEEEE--ecCChhhhhhhhhh
Confidence 33467788877777866665 89998888887765
No 4
>d1s1ma1 c.23.16.1 (A:287-544) CTP synthase PyrG, C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=10.99 E-value=66 Score=22.82 Aligned_cols=20 Identities=35% Similarity=0.479 Sum_probs=16.6
Q ss_pred ccccCCCCCCCHHHHHHHHh
Q 045941 28 TVVPGGTGGKSPEAQEHLAE 47 (102)
Q Consensus 28 TVVpgGTGGksleAQe~LAE 47 (102)
-|||||-|-...|-....++
T Consensus 61 IlvPGGFG~RG~eGki~ai~ 80 (258)
T d1s1ma1 61 ILVPGGFGYRGVEGMITTAR 80 (258)
T ss_dssp EEECCCCSSTTHHHHHHHHH
T ss_pred EEeecccCcCCHHHHHHHHH
Confidence 68999999999988776554
No 5
>d1t8ka_ a.28.1.1 (A:) Acyl carrier protein {Escherichia coli [TaxId: 562]}
Probab=10.08 E-value=35 Score=18.85 Aligned_cols=16 Identities=6% Similarity=0.287 Sum_probs=11.9
Q ss_pred hHHHHhhCCCCCCccc
Q 045941 83 ERAAQEWGIDVNESKV 98 (102)
Q Consensus 83 Era~~e~Gi~iDEskf 98 (102)
-+.++++||.|+++.+
T Consensus 44 ~~iE~~f~i~i~~~~~ 59 (77)
T d1t8ka_ 44 MALEEEFDTEIPDEEA 59 (77)
T ss_dssp HHHHHHHTCCCCHHHH
T ss_pred HHHHHHhCCCCCHHHH
Confidence 3578888999887654
No 6
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}
Probab=9.60 E-value=37 Score=22.24 Aligned_cols=8 Identities=50% Similarity=0.638 Sum_probs=6.7
Q ss_pred ccccCCCC
Q 045941 28 TVVPGGTG 35 (102)
Q Consensus 28 TVVpgGTG 35 (102)
-|+|+|||
T Consensus 88 ~iiP~GTg 95 (312)
T d2qv7a1 88 GVIPMGTV 95 (312)
T ss_dssp EEEECSSC
T ss_pred EEeecCCC
Confidence 47899998
No 7
>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}
Probab=9.35 E-value=20 Score=21.47 Aligned_cols=20 Identities=15% Similarity=0.187 Sum_probs=13.6
Q ss_pred HhcCCcc-ccCCCCCCCHHHH
Q 045941 23 ARQGQTV-VPGGTGGKSPEAQ 42 (102)
Q Consensus 23 Ar~GeTV-VpgGTGGksleAQ 42 (102)
.+.||+| |-||.||-.+=|.
T Consensus 26 l~~g~~Vlv~ga~g~vG~~~i 46 (179)
T d1qora2 26 IKPDEQFLFHAAAGGVGLIAC 46 (179)
T ss_dssp CCTTCEEEESSTTBHHHHHHH
T ss_pred CCCCCEEEEEccccccchHHH
Confidence 4679996 7778876555443
No 8
>d1bjna_ c.67.1.4 (A:) Phosphoserine aminotransferase, PSAT {Escherichia coli [TaxId: 562]}
Probab=9.26 E-value=27 Score=21.91 Aligned_cols=9 Identities=33% Similarity=0.593 Sum_probs=6.1
Q ss_pred CCCCCCccc
Q 045941 1 FNFTPDEDD 9 (102)
Q Consensus 1 ~~~~~~~~~ 9 (102)
|||+|-.--
T Consensus 3 ~nF~pGP~~ 11 (360)
T d1bjna_ 3 FNFSSGPAM 11 (360)
T ss_dssp EECCSSSCC
T ss_pred EEeCCCCcC
Confidence 688886553
No 9
>d1xxxa1 c.1.10.1 (A:5-300) Dihydrodipicolinate synthase {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=8.94 E-value=1.3e+02 Score=19.47 Aligned_cols=11 Identities=18% Similarity=0.099 Sum_probs=4.9
Q ss_pred HHHHHHHHhcC
Q 045941 16 RAELDAKARQG 26 (102)
Q Consensus 16 r~eLd~rAr~G 26 (102)
|+.++.....|
T Consensus 31 ~~~i~~li~~G 41 (296)
T d1xxxa1 31 ARLANHLVDQG 41 (296)
T ss_dssp HHHHHHHHHTT
T ss_pred HHHHHHHHHcC
Confidence 44444444444
No 10
>d1s0yb_ d.80.1.1 (B:) Trans-3-chloroacrylic acid dehalogenase beta-subunit, CaaD2 {Pseudomonas pavonaceae [TaxId: 47881]}
Probab=8.30 E-value=34 Score=20.13 Aligned_cols=8 Identities=50% Similarity=0.455 Sum_probs=6.5
Q ss_pred cchhhhhc
Q 045941 54 QTRKEQLG 61 (102)
Q Consensus 54 QtRkEQLG 61 (102)
|+|+|||=
T Consensus 13 ~ar~~ql~ 20 (55)
T d1s0yb_ 13 VARKQQLI 20 (55)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 78999984
Done!