BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045945
(122 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P27788|FER3_MAIZE Ferredoxin-3, chloroplastic OS=Zea mays GN=FDX3 PE=2 SV=1
Length = 152
Score = 123 bits (308), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 78/151 (51%), Positives = 87/151 (57%), Gaps = 35/151 (23%)
Query: 6 MSTVRLPTSC--LFQTAPTRMKFPLVKSPGSLVSRS-VSKAFGLKSSS-FKVSAMAVYK- 60
MST TSC L T+ VKSP SL S V+K LK+S VSAMAVYK
Sbjct: 1 MSTSTFATSCTLLGNVRTTQASQTAVKSPSSLSFFSQVTKVPSLKTSKKLDVSAMAVYKV 60
Query: 61 ------------------------------LPYSCRAGACSTCAGLMVSGSVDQSDGSFL 90
LPYSCRAGACSTCAG + SGSVDQSDGSFL
Sbjct: 61 KLVGPEGEEHEFDAPDDAYILDAAETAGVELPYSCRAGACSTCAGKIESGSVDQSDGSFL 120
Query: 91 DDNQMEKGYVLTCIAYPKSDCVIYTHKESEL 121
DD Q E+GYVLTC++YPKSDCVI+THKE +L
Sbjct: 121 DDGQQEEGYVLTCVSYPKSDCVIHTHKEGDL 151
>sp|Q9ZQG8|FER3_ARATH Ferredoxin-3, chloroplastic OS=Arabidopsis thaliana GN=FD3 PE=1
SV=1
Length = 155
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 71/154 (46%), Positives = 92/154 (59%), Gaps = 38/154 (24%)
Query: 6 MSTVRLPTSCLFQT---APTRMKFPLVKSPGSLV--SRSVSKAFGLKSSSFKVSAM--AV 58
M+TVR+ ++ + + + T K KS V ++ VS++FGLK S+ A AV
Sbjct: 1 MATVRISSTSMTKAVLRSQTTNKLITNKSYNLSVGSTKRVSRSFGLKCSANSGGATMSAV 60
Query: 59 YK-------------------------------LPYSCRAGACSTCAGLMVSGSVDQSDG 87
YK LPYSCRAGACSTCAG +VSG+VDQSDG
Sbjct: 61 YKVKLLGPDGQEDEFEVQDDQYILDAAEEAGVDLPYSCRAGACSTCAGQIVSGNVDQSDG 120
Query: 88 SFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESEL 121
SFL+D+ +EKGYVLTC+AYP+SDCVI+THKE+EL
Sbjct: 121 SFLEDSHLEKGYVLTCVAYPQSDCVIHTHKETEL 154
>sp|P14937|FER2_RAPSA Ferredoxin, root R-B2 OS=Raphanus sativus PE=1 SV=1
Length = 98
Score = 111 bits (278), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 51/80 (63%), Positives = 63/80 (78%), Gaps = 2/80 (2%)
Query: 44 FGLKSSSFKVSAM--AVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVL 101
F ++ F + A A LPYSCRAGACSTCAG +V G VDQS+GSFL+D+ EKG+VL
Sbjct: 18 FEVQDDQFILDAAEEAGVDLPYSCRAGACSTCAGQIVKGQVDQSEGSFLEDDHFEKGFVL 77
Query: 102 TCIAYPKSDCVIYTHKESEL 121
TC+AYP+SDCVI+THKE+EL
Sbjct: 78 TCVAYPQSDCVIHTHKETEL 97
>sp|P00248|FER_MASLA Ferredoxin OS=Mastigocladus laminosus GN=petF PE=1 SV=2
Length = 99
Score = 111 bits (277), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 49/62 (79%), Positives = 55/62 (88%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG ++SG+VDQSD SFLDD+Q+E GYVLTC+AYP SDCVI THKE
Sbjct: 37 DLPYSCRAGACSTCAGKLISGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCVIETHKEE 96
Query: 120 EL 121
EL
Sbjct: 97 EL 98
>sp|P94044|FER6_MAIZE Ferredoxin-6, chloroplastic OS=Zea mays GN=FDX6 PE=2 SV=1
Length = 155
Score = 109 bits (272), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 46/71 (64%), Positives = 59/71 (83%)
Query: 51 FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSD 110
+ + A +LP+SCRAG+CSTCAG M +G VDQS+GSFLDD QM +GY+LTCI+YPK+D
Sbjct: 84 LEAAETAGVELPFSCRAGSCSTCAGRMSAGEVDQSEGSFLDDGQMAEGYLLTCISYPKAD 143
Query: 111 CVIYTHKESEL 121
CVI+THKE +L
Sbjct: 144 CVIHTHKEEDL 154
>sp|P00253|FER_NOSMU Ferredoxin OS=Nostoc muscorum PE=1 SV=2
Length = 99
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 55/63 (87%)
Query: 59 YKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 118
Y LP+SCRAGACSTCAG +VSG+VDQSD SFLDD+Q+E GYVLTC+AYP SD VI THKE
Sbjct: 36 YDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKE 95
Query: 119 SEL 121
+L
Sbjct: 96 EDL 98
>sp|P0A3C7|FER1_NOSS1 Ferredoxin-1 OS=Nostoc sp. (strain PCC 7120 / UTEX 2576) GN=petF
PE=1 SV=2
Length = 99
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 55/63 (87%)
Query: 59 YKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 118
Y LP+SCRAGACSTCAG +VSG+VDQSD SFLDD+Q+E GYVLTC+AYP SD VI THKE
Sbjct: 36 YDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKE 95
Query: 119 SEL 121
+L
Sbjct: 96 EDL 98
>sp|P0A3C8|FER1_ANASO Ferredoxin-1 OS=Anabaena sp. (strain PCC 7119) GN=petF PE=1 SV=2
Length = 99
Score = 108 bits (270), Expect = 9e-24, Method: Compositional matrix adjust.
Identities = 48/63 (76%), Positives = 55/63 (87%)
Query: 59 YKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 118
Y LP+SCRAGACSTCAG +VSG+VDQSD SFLDD+Q+E GYVLTC+AYP SD VI THKE
Sbjct: 36 YDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKE 95
Query: 119 SEL 121
+L
Sbjct: 96 EDL 98
>sp|P00247|FER_CHLFR Ferredoxin OS=Chlorogloeopsis fritschii PE=1 SV=2
Length = 99
Score = 107 bits (267), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 53/62 (85%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG + SG+VDQSD SFLDD+Q+E GYVLTC+AYP SDC I THKE
Sbjct: 37 DLPYSCRAGACSTCAGKIKSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEE 96
Query: 120 EL 121
EL
Sbjct: 97 EL 98
>sp|P83522|FER_HORVU Ferredoxin OS=Hordeum vulgare PE=1 SV=1
Length = 97
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 54/62 (87%)
Query: 61 LPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120
LPYSCRAG+CS+CAG +VSG +DQSD SFLDD+QME+G+VLTC AYPKSD VI THKE E
Sbjct: 35 LPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEEGWVLTCAAYPKSDVVIETHKEEE 94
Query: 121 LN 122
L
Sbjct: 95 LT 96
>sp|O04166|FER_PHYPA Ferredoxin, chloroplastic OS=Physcomitrella patens subsp. patens
GN=PETF PE=2 SV=1
Length = 145
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 56/118 (47%), Positives = 72/118 (61%), Gaps = 33/118 (27%)
Query: 37 SRSVSKAFGLKSSSF-KVSAMAVYK--------------------------------LPY 63
S SV+KAFGLKS S +++ MA YK LPY
Sbjct: 28 SVSVAKAFGLKSRSMGRLTCMATYKVTFLDGETGAENVXECSDEEYXLDAAERAGMDLPY 87
Query: 64 SCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESEL 121
SCRAGACS+CAG++ +G VDQSD SFLDD+Q++ G+VLTC+AYP SDC+I TH+E +
Sbjct: 88 SCRAGACSSCAGIIKAGEVDQSDQSFLDDSQIDDGFVLTCVAYPASDCIIXTHQEENM 145
>sp|P00254|FER1_ANAVT Ferredoxin-1 OS=Anabaena variabilis (strain ATCC 29413 / PCC 7937)
GN=petF1 PE=1 SV=2
Length = 99
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/63 (74%), Positives = 54/63 (85%)
Query: 59 YKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 118
Y LP+SCRAGACSTCAG +VSG+VDQSD SFLDD+Q+E GYVLTC+AYP SD I THKE
Sbjct: 36 YDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVTIQTHKE 95
Query: 119 SEL 121
+L
Sbjct: 96 EDL 98
>sp|P00228|FER_WHEAT Ferredoxin, chloroplastic OS=Triticum aestivum GN=PETF PE=1 SV=2
Length = 143
Score = 107 bits (266), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%)
Query: 61 LPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120
LPYSCRAG+CS+CAG +VSG +DQSD SFLDD+QME G+VLTC AYPKSD VI THKE E
Sbjct: 81 LPYSCRAGSCSSCAGKLVSGEIDQSDQSFLDDDQMEAGWVLTCHAYPKSDIVIETHKEEE 140
Query: 121 LN 122
L
Sbjct: 141 LT 142
>sp|P00234|FER1_EQUTE Ferredoxin-1 OS=Equisetum telmateia PE=1 SV=1
Length = 95
Score = 106 bits (265), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/65 (75%), Positives = 56/65 (86%)
Query: 57 AVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTH 116
A Y LP+SCRAGACS+C G +VSGSVDQS+GSFLDD QME+G+VLTCIA P+SD VI TH
Sbjct: 30 AGYDLPFSCRAGACSSCLGKVVSGSVDQSEGSFLDDGQMEEGFVLTCIAIPESDLVIETH 89
Query: 117 KESEL 121
KE EL
Sbjct: 90 KEEEL 94
>sp|P14936|FER1_RAPSA Ferredoxin, root R-B1 OS=Raphanus sativus PE=1 SV=1
Length = 98
Score = 106 bits (265), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 47/61 (77%), Positives = 53/61 (86%)
Query: 61 LPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120
LPYSCRAGACSTCAG + G VDQSDGSFL+D+ EKGYVLTC+AYP+SD VI+THKE E
Sbjct: 37 LPYSCRAGACSTCAGKIEKGQVDQSDGSFLEDHHFEKGYVLTCVAYPQSDLVIHTHKEEE 96
Query: 121 L 121
L
Sbjct: 97 L 97
>sp|P00243|FER_SYNY4 Ferredoxin OS=Synechocystis sp. (strain PCC 6714) PE=1 SV=2
Length = 97
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG + +GSVDQSD SFLDD+Q+E GYVLTC+AYP SDC I THKE
Sbjct: 35 DLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEE 94
Query: 120 EL 121
+L
Sbjct: 95 DL 96
>sp|P00252|FER1_NOSMU Ferredoxin-1 OS=Nostoc muscorum PE=1 SV=2
Length = 99
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 54/62 (87%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG +VSG+VDQSD SFLDD+Q+EKGYVLTC+AYP SD I THKE
Sbjct: 37 DLPYSCRAGACSTCAGKIVSGTVDQSDQSFLDDDQIEKGYVLTCVAYPTSDLKIETHKEE 96
Query: 120 EL 121
+L
Sbjct: 97 DL 98
>sp|P27320|FER_SYNY3 Ferredoxin-1 OS=Synechocystis sp. (strain PCC 6803 / Kazusa)
GN=petF PE=1 SV=2
Length = 97
Score = 106 bits (264), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 53/62 (85%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG + +GSVDQSD SFLDD+Q+E GYVLTC+AYP SDC I THKE
Sbjct: 35 DLPYSCRAGACSTCAGKITAGSVDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIETHKEE 94
Query: 120 EL 121
+L
Sbjct: 95 DL 96
>sp|O04090|FER1_ARATH Ferredoxin-1, chloroplastic OS=Arabidopsis thaliana GN=FD1 PE=1
SV=1
Length = 148
Score = 105 bits (263), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 57/111 (51%), Positives = 67/111 (60%), Gaps = 33/111 (29%)
Query: 44 FGLKSSSFK---VSAMAVYK------------------------------LPYSCRAGAC 70
FGLKSS+ + V+AMA YK LPYSCRAG+C
Sbjct: 37 FGLKSSTARGGRVTAMATYKVKFITPEGEQEVECEEDVYVLDAAEEAGLDLPYSCRAGSC 96
Query: 71 STCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESEL 121
S+CAG +VSGS+DQSD SFLDD QM +GYVLTC+AYP SD VI THKE +
Sbjct: 97 SSCAGKVVSGSIDQSDQSFLDDEQMSEGYVLTCVAYPTSDVVIETHKEEAI 147
>sp|P00255|FER_SYNLI Ferredoxin OS=Synechococcus lividus PE=1 SV=2
Length = 97
Score = 105 bits (262), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 45/61 (73%), Positives = 54/61 (88%)
Query: 61 LPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120
LP+SCRAGACSTCAG ++ G VDQSD SFLDD+Q+EKG+VLTC+AYP+SDC I TH+E E
Sbjct: 36 LPFSCRAGACSTCAGKLLEGEVDQSDQSFLDDDQIEKGFVLTCVAYPRSDCKILTHQEEE 95
Query: 121 L 121
L
Sbjct: 96 L 96
>sp|P00223|FER_ARCLA Ferredoxin OS=Arctium lappa PE=1 SV=1
Length = 97
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 47/69 (68%), Positives = 56/69 (81%)
Query: 54 SAMAVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVI 113
+A V LPYSCRAG+CS+CAG + +GSVDQSDGS+LDD+QME G+VLTC+AYP SD I
Sbjct: 28 AAEEVGDLPYSCRAGSCSSCAGKVTAGSVDQSDGSYLDDDQMEAGWVLTCVAYPTSDVTI 87
Query: 114 YTHKESELN 122
THKE EL
Sbjct: 88 ETHKEEELT 96
>sp|P00235|FER1_EQUAR Ferredoxin-1 OS=Equisetum arvense PE=1 SV=1
Length = 95
Score = 105 bits (262), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 56/65 (86%)
Query: 57 AVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTH 116
A Y LP+SCRAGACS+C G +VSGSVD+S+GSFLDD QME+G+VLTCIA P+SD VI TH
Sbjct: 30 AGYDLPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIPESDLVIETH 89
Query: 117 KESEL 121
KE EL
Sbjct: 90 KEEEL 94
>sp|P00242|FER_PORUM Ferredoxin OS=Porphyra umbilicalis GN=PETF PE=1 SV=1
Length = 98
Score = 105 bits (261), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 52/62 (83%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
+LPYSCRAGACSTCAG + G+VDQSD SFLDD QM KGYVLTCIAYP+SDC I TH E
Sbjct: 36 ELPYSCRAGACSTCAGKVTEGTVDQSDQSFLDDEQMLKGYVLTCIAYPESDCTILTHVEQ 95
Query: 120 EL 121
EL
Sbjct: 96 EL 97
>sp|P51320|FER_PORPU Ferredoxin OS=Porphyra purpurea GN=petF PE=3 SV=2
Length = 99
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 48/62 (77%), Positives = 52/62 (83%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
+LPYSCRAGACSTCAG + GSVDQSD SFLDD Q+ KGYVLTCIAYP+SDC I TH E
Sbjct: 37 ELPYSCRAGACSTCAGKVTEGSVDQSDQSFLDDEQLLKGYVLTCIAYPESDCTILTHVEQ 96
Query: 120 EL 121
EL
Sbjct: 97 EL 98
>sp|Q9ZTS2|FER_CAPAN Ferredoxin, chloroplastic OS=Capsicum annuum GN=AP1 PE=1 SV=1
Length = 144
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 57/65 (87%)
Query: 57 AVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTH 116
A + LPYSCRAG+CS+CAG + G+VDQ+DG+FLDD+Q+E+G+VLTC+AYP+SD I TH
Sbjct: 78 AGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETH 137
Query: 117 KESEL 121
KE+EL
Sbjct: 138 KEAEL 142
>sp|P00245|FER_SPIMA Ferredoxin OS=Spirulina maxima PE=1 SV=2
Length = 99
Score = 104 bits (259), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 52/62 (83%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG + SGS+DQSD SFLDD+Q+E GYVLTC+AYP SDC I TH+E
Sbjct: 37 DLPYSCRAGACSTCAGKITSGSIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIQTHQEE 96
Query: 120 EL 121
L
Sbjct: 97 GL 98
>sp|P15788|FER_HALP7 Ferredoxin OS=Halothece sp. (strain PCC 7418) PE=1 SV=2
Length = 99
Score = 103 bits (258), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 51/62 (82%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG + G +DQSD SFLDD+Q+E GYVLTC+AYP SDC I TH+E
Sbjct: 37 DLPYSCRAGACSTCAGKIKEGEIDQSDQSFLDDDQIEAGYVLTCVAYPASDCTIITHQEE 96
Query: 120 EL 121
EL
Sbjct: 97 EL 98
>sp|P0A3D1|FER_THEVL Ferredoxin-1 OS=Thermosynechococcus vulcanus GN=petF1 PE=3 SV=2
Length = 98
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Query: 25 KFPLVKSPGSLVSRSVSKAFGLKSSSFKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQ 84
K LV+ GS + V + V+ LP+SCRAGACSTCAG ++ G VDQ
Sbjct: 5 KVTLVRPDGSETTIDVPE----DEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQ 60
Query: 85 SDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESEL 121
SD SFLDD+Q+EKG+VLTC+AYP+SDC I T++E EL
Sbjct: 61 SDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
>sp|P0A3C9|FER_THEEB Ferredoxin-1 OS=Thermosynechococcus elongatus (strain BP-1)
GN=petF1 PE=1 SV=2
Length = 98
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Query: 25 KFPLVKSPGSLVSRSVSKAFGLKSSSFKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQ 84
K LV+ GS + V + V+ LP+SCRAGACSTCAG ++ G VDQ
Sbjct: 5 KVTLVRPDGSETTIDVPE----DEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQ 60
Query: 85 SDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESEL 121
SD SFLDD+Q+EKG+VLTC+AYP+SDC I T++E EL
Sbjct: 61 SDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
>sp|P0A3D0|FER_SYNEL Ferredoxin-1 OS=Synechococcus elongatus GN=petF1 PE=3 SV=2
Length = 98
Score = 103 bits (258), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 51/97 (52%), Positives = 65/97 (67%), Gaps = 4/97 (4%)
Query: 25 KFPLVKSPGSLVSRSVSKAFGLKSSSFKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQ 84
K LV+ GS + V + V+ LP+SCRAGACSTCAG ++ G VDQ
Sbjct: 5 KVTLVRPDGSETTIDVPE----DEYILDVAEEQGLDLPFSCRAGACSTCAGKLLEGEVDQ 60
Query: 85 SDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESEL 121
SD SFLDD+Q+EKG+VLTC+AYP+SDC I T++E EL
Sbjct: 61 SDQSFLDDDQIEKGFVLTCVAYPRSDCKILTNQEEEL 97
>sp|P00244|FER1_APHFL Ferredoxin-1 OS=Aphanizomenon flos-aquae PE=1 SV=2
Length = 98
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 53/62 (85%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG +V+G++DQSD SFLDD+Q+E GYVLTC+AYP SD I THKE
Sbjct: 36 DLPYSCRAGACSTCAGKLVTGTIDQSDQSFLDDDQVEAGYVLTCVAYPTSDVTIETHKEE 95
Query: 120 EL 121
+L
Sbjct: 96 DL 97
>sp|P00246|FER_SPIPL Ferredoxin OS=Spirulina platensis PE=1 SV=2
Length = 99
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 52/62 (83%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG + SG++DQSD SFLDD+Q+E GYVLTC+AYP SDC I TH+E
Sbjct: 37 DLPYSCRAGACSTCAGTITSGTIDQSDQSFLDDDQIEAGYVLTCVAYPTSDCTIKTHQEE 96
Query: 120 EL 121
L
Sbjct: 97 GL 98
>sp|P09911|FER1_PEA Ferredoxin-1, chloroplastic OS=Pisum sativum GN=PETF PE=1 SV=2
Length = 149
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 52/62 (83%)
Query: 61 LPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120
LPYSCRAG+CS+CAG +V G VDQSDGSFLDD Q+E G+VLTC+AYP SD VI THKE +
Sbjct: 87 LPYSCRAGSCSSCAGKVVGGEVDQSDGSFLDDEQIEAGFVLTCVAYPTSDVVIETHKEED 146
Query: 121 LN 122
L
Sbjct: 147 LT 148
>sp|O04683|FER1_MESCR Ferredoxin-1, chloroplastic OS=Mesembryanthemum crystallinum PE=2
SV=1
Length = 148
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 54/111 (48%), Positives = 67/111 (60%), Gaps = 32/111 (28%)
Query: 44 FGLKSSS--FKVSAMAVYK------------------------------LPYSCRAGACS 71
FGLKSS+ +V+AMA YK LPYSCRAG+CS
Sbjct: 37 FGLKSSASRGRVTAMAAYKVTLVTPEGKQELECPDDVYILDAAEEAGIDLPYSCRAGSCS 96
Query: 72 TCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESELN 122
+CAG + SGSV+Q DGSFLDD+Q+++G+VLTC+AYP D I THKE EL
Sbjct: 97 SCAGKVTSGSVNQDDGSFLDDDQIKEGWVLTCVAYPTGDVTIETHKEEELT 147
>sp|P00226|FER_SAMNI Ferredoxin OS=Sambucus nigra PE=1 SV=1
Length = 97
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 54/62 (87%)
Query: 61 LPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120
+PYSCRAG+CS+CAG +V+GSVDQSD SFLDD Q+E+G+VLTC+AYPKSD I THKE E
Sbjct: 35 IPYSCRAGSCSSCAGKLVAGSVDQSDQSFLDDEQIEEGWVLTCVAYPKSDVTIETHKEEE 94
Query: 121 LN 122
L
Sbjct: 95 LT 96
>sp|Q51577|FER1_PLEBO Ferredoxin-1 OS=Plectonema boryanum GN=petF1 PE=1 SV=1
Length = 99
Score = 103 bits (257), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 44/62 (70%), Positives = 53/62 (85%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG + +G+VDQSD SFLDD+Q++ GYVLTC+AYP SDC I TH+E
Sbjct: 37 DLPYSCRAGACSTCAGKITAGTVDQSDQSFLDDDQIQAGYVLTCVAYPTSDCTILTHQEE 96
Query: 120 EL 121
+L
Sbjct: 97 DL 98
>sp|P04669|FER_SILPR Ferredoxin, chloroplastic OS=Silene pratensis GN=PETF PE=2 SV=1
Length = 146
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/128 (46%), Positives = 73/128 (57%), Gaps = 34/128 (26%)
Query: 27 PLVKSPGSLVSRSVSKAFGLKSSSF-KVSAMAVYK------------------------- 60
P+V S SL + FGLK+ S +V+AMA YK
Sbjct: 20 PMVAS--SLPTNMGQALFGLKAGSRGRVTAMATYKVTLITKESGTVTFDCPDDVYVLDQA 77
Query: 61 ------LPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIY 114
LPYSCRAG+CS+CAG +V+GSVDQSD SFLDD+Q+E G+VLTC AYP +D I
Sbjct: 78 EEEGIDLPYSCRAGSCSSCAGKVVAGSVDQSDQSFLDDDQIEAGWVLTCAAYPSADVTIE 137
Query: 115 THKESELN 122
THKE EL
Sbjct: 138 THKEEELT 145
>sp|P83527|FER_CAPAA Ferredoxin OS=Capsicum annuum var. annuum PE=1 SV=1
Length = 97
Score = 103 bits (256), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 43/65 (66%), Positives = 57/65 (87%)
Query: 57 AVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTH 116
A + LPYSCRAG+CS+CAG + G+VDQ+DG+FLDD+Q+E+G+VLTC+AYP+SD I TH
Sbjct: 31 AGHDLPYSCRAGSCSSCAGKIAGGAVDQTDGNFLDDDQLEEGWVLTCVAYPQSDVTIETH 90
Query: 117 KESEL 121
KE+EL
Sbjct: 91 KEAEL 95
>sp|P81372|FERA_ALOMA Ferredoxin-A OS=Alocasia macrorrhizos PE=1 SV=1
Length = 97
Score = 102 bits (255), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 52/62 (83%)
Query: 61 LPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120
LPYSCRAG+CS+CAG + G VDQSDGSFLDD QME+G+VLTC+A+P SD VI THKE E
Sbjct: 35 LPYSCRAGSCSSCAGKVKQGEVDQSDGSFLDDEQMEQGWVLTCVAFPTSDVVIETHKEEE 94
Query: 121 LN 122
L
Sbjct: 95 LT 96
>sp|P00224|FER2_SPIOL Ferredoxin-2 OS=Spinacia oleracea PE=1 SV=1
Length = 97
Score = 102 bits (254), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 54/98 (55%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 25 KFPLVKSPGSLVSRSVSKAFGLKSSSFKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQ 84
K LV GS V + L ++ K LPYSCRAGACS+CAG + SGSVDQ
Sbjct: 4 KVTLVTPSGSQVIECGDDEYILDAAEEKG-----MDLPYSCRAGACSSCAGKVTSGSVDQ 58
Query: 85 SDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESELN 122
SD SFL+D QME+G+VLTCIAYP D I THKE EL
Sbjct: 59 SDQSFLEDGQMEEGWVLTCIAYPTGDVTIETHKEEELT 96
>sp|P31965|FER1_SYNP2 Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 /
PR-6) GN=petF PE=3 SV=2
Length = 97
Score = 102 bits (254), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 48/65 (73%), Positives = 55/65 (84%)
Query: 57 AVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTH 116
A Y LP SCRAGACSTCAG +VSG+VDQS+ SFLDD+Q+E GYVLTCIAYP+SD I T+
Sbjct: 32 AGYDLPASCRAGACSTCAGKIVSGTVDQSEQSFLDDDQIEAGYVLTCIAYPQSDVTIETN 91
Query: 117 KESEL 121
KE EL
Sbjct: 92 KEEEL 96
>sp|P83525|FER_SCOJA Ferredoxin OS=Scopolia japonica PE=1 SV=1
Length = 97
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 56/63 (88%)
Query: 59 YKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 118
++LPYSCRAG+CS+CAG + +G+VDQSDG+FLDD+QM G+VLTC+AYP+SD +I THKE
Sbjct: 33 HELPYSCRAGSCSSCAGKVSAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVIIETHKE 92
Query: 119 SEL 121
EL
Sbjct: 93 EEL 95
>sp|Q0J8M2|FER1_ORYSJ Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. japonica GN=ADI1
PE=1 SV=1
Length = 139
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 75/131 (57%), Gaps = 16/131 (12%)
Query: 7 STVRLPTSCLFQTAPTRMKFPLVKSPGSLVSRSVSKA---FGLKSSSFKVSAMA---VY- 59
S VRLP S TAP + ++ + L R +A L + +V VY
Sbjct: 8 SQVRLPMSLRVATAPAPARVSVLPASNKLGDRLRMQATYNVKLITPDGEVELQVPDDVYI 67
Query: 60 ---------KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSD 110
LPYSCRAG+CS+CAG +VSG +DQSD SFLDD+Q+ G+VLTC AYPKSD
Sbjct: 68 LDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSD 127
Query: 111 CVIYTHKESEL 121
VI THKE +L
Sbjct: 128 VVIETHKEDDL 138
>sp|A2YQD9|FER1_ORYSI Ferredoxin-1, chloroplastic OS=Oryza sativa subsp. indica GN=ADI1
PE=1 SV=1
Length = 139
Score = 102 bits (253), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 75/131 (57%), Gaps = 16/131 (12%)
Query: 7 STVRLPTSCLFQTAPTRMKFPLVKSPGSLVSRSVSKA---FGLKSSSFKVSAMA---VY- 59
S VRLP S TAP + ++ + L R +A L + +V VY
Sbjct: 8 SQVRLPMSLRVATAPAPARVSVLPASNKLGDRLRMQATYNVKLITPDGEVELQVPDDVYI 67
Query: 60 ---------KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSD 110
LPYSCRAG+CS+CAG +VSG +DQSD SFLDD+Q+ G+VLTC AYPKSD
Sbjct: 68 LDQAEEEGIDLPYSCRAGSCSSCAGKVVSGEIDQSDQSFLDDDQVAAGWVLTCHAYPKSD 127
Query: 111 CVIYTHKESEL 121
VI THKE +L
Sbjct: 128 VVIETHKEDDL 138
>sp|P83520|FER_DATAR Ferredoxin OS=Datura arborea PE=1 SV=1
Length = 97
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 55/63 (87%)
Query: 59 YKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 118
++LPYSCRAG+CS+CAG + +G+VDQSDG+FLDD+QM G+VLTC+AYP+SD I THKE
Sbjct: 33 HELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKE 92
Query: 119 SEL 121
EL
Sbjct: 93 EEL 95
>sp|P83582|FER_SOLNI Ferredoxin OS=Solanum nigrum PE=1 SV=1
Length = 97
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 55/63 (87%)
Query: 59 YKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 118
++LPYSCRAG+CS+CAG + +G+VDQSDG+FLDD+QM G+VLTC+AYPKSD I THKE
Sbjct: 33 HELPYSCRAGSCSSCAGKVTAGTVDQSDGNFLDDDQMADGFVLTCVAYPKSDVTIETHKE 92
Query: 119 SEL 121
+L
Sbjct: 93 EDL 95
>sp|P0A3D3|FER1_SYNP6 Ferredoxin-1 OS=Synechococcus sp. (strain ATCC 27144 / PCC 6301 /
SAUG 1402/1) GN=petF1 PE=1 SV=2
Length = 99
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 52/62 (83%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG +VSG+VDQSD SFLDD+Q+ G+VLTC+AYP SD I THKE
Sbjct: 37 DLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEE 96
Query: 120 EL 121
+L
Sbjct: 97 DL 98
>sp|P0A3D2|FER1_SYNE7 Ferredoxin-1 OS=Synechococcus elongatus (strain PCC 7942) GN=petF
PE=3 SV=2
Length = 99
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 45/62 (72%), Positives = 52/62 (83%)
Query: 60 KLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKES 119
LPYSCRAGACSTCAG +VSG+VDQSD SFLDD+Q+ G+VLTC+AYP SD I THKE
Sbjct: 37 DLPYSCRAGACSTCAGKVVSGTVDQSDQSFLDDDQIAAGFVLTCVAYPTSDVTIETHKEE 96
Query: 120 EL 121
+L
Sbjct: 97 DL 98
>sp|P83526|FER_TOBAC Ferredoxin OS=Nicotiana tabacum PE=1 SV=1
Length = 97
Score = 101 bits (252), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 43/63 (68%), Positives = 54/63 (85%)
Query: 59 YKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 118
+ LPYSCRAG+CS+CAG + +G+VDQSDG+FLDD+QM G+VLTC+AYP+SD I THKE
Sbjct: 33 HDLPYSCRAGSCSSCAGKVTAGNVDQSDGNFLDDDQMADGFVLTCVAYPQSDVTIETHKE 92
Query: 119 SEL 121
EL
Sbjct: 93 EEL 95
>sp|P00236|FER2_EQUTE Ferredoxin-2 OS=Equisetum telmateia PE=1 SV=1
Length = 93
Score = 101 bits (251), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 46/61 (75%), Positives = 53/61 (86%)
Query: 61 LPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120
LP SC+AGACSTC G +VSG+VDQS+GSFLDD Q+E+GYVLTCIA P+SD VI THKE E
Sbjct: 33 LPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPESDVVIETHKEDE 92
Query: 121 L 121
L
Sbjct: 93 L 93
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.128 0.374
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 38,418,418
Number of Sequences: 539616
Number of extensions: 1169751
Number of successful extensions: 2760
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 141
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 2607
Number of HSP's gapped (non-prelim): 159
length of query: 122
length of database: 191,569,459
effective HSP length: 89
effective length of query: 33
effective length of database: 143,543,635
effective search space: 4736939955
effective search space used: 4736939955
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)