Query 045945
Match_columns 122
No_of_seqs 144 out of 1687
Neff 6.0
Searched_HMMs 29240
Date Mon Mar 25 12:14:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045945.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045945hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2pia_A Phthalate dioxygenase r 99.9 1.6E-22 5.6E-27 159.9 8.8 92 22-115 191-321 (321)
2 1awd_A Ferredoxin; electron tr 99.8 4.4E-21 1.5E-25 128.8 6.3 79 43-121 13-93 (94)
3 1czp_A Ferredoxin I; [2Fe-2S] 99.8 6.1E-21 2.1E-25 129.0 6.0 79 43-121 17-97 (98)
4 1frd_A Heterocyst [2Fe-2S] fer 99.8 5.8E-21 2E-25 128.7 5.7 79 43-121 17-97 (98)
5 1frr_A Ferredoxin I; electron 99.8 1E-20 3.5E-25 126.6 6.3 79 43-121 14-94 (95)
6 1a70_A Ferredoxin; iron-sulfur 99.8 5.5E-21 1.9E-25 129.1 4.9 79 43-121 15-95 (97)
7 1wri_A Ferredoxin II, ferredox 99.8 7.9E-21 2.7E-25 127.5 5.5 78 43-121 14-93 (93)
8 1iue_A Ferredoxin; electron tr 99.8 6.1E-21 2.1E-25 129.1 4.0 78 43-120 15-94 (98)
9 1jq4_A Methane monooxygenase c 99.8 9.5E-20 3.2E-24 122.9 1.2 76 43-118 18-97 (98)
10 1doi_A 2Fe-2S ferredoxin; halo 99.7 3.1E-18 1E-22 121.9 6.8 74 43-116 39-116 (128)
11 3lxf_A Ferredoxin; iron, iron- 99.7 3.5E-18 1.2E-22 117.2 3.4 77 43-119 14-104 (104)
12 3ah7_A [2Fe-2S]ferredoxin; [2F 99.7 9.6E-18 3.3E-22 115.8 4.8 77 43-119 18-104 (113)
13 1b9r_A Protein (terpredoxin); 99.7 1.6E-18 5.3E-23 118.2 -0.7 76 43-118 14-104 (105)
14 1xlq_A Putidaredoxin, PDX; [2F 99.7 3.2E-18 1.1E-22 116.9 0.8 77 43-119 14-105 (106)
15 1uwm_A Ferredoxin VI, FDVI; el 99.7 3.6E-18 1.2E-22 116.6 0.2 77 43-119 14-105 (106)
16 3zyy_X Iron-sulfur cluster bin 99.7 4.1E-17 1.4E-21 141.2 6.3 80 42-121 13-95 (631)
17 2wlb_A ETP1-FD, electron trans 99.7 1E-17 3.6E-22 113.7 1.8 74 43-116 17-103 (103)
18 1i7h_A Ferredoxin; 2Fe-2S,elec 99.7 4.7E-17 1.6E-21 112.1 4.5 77 43-119 18-104 (111)
19 1krh_A Benzoate 1,2-dioxygenas 99.6 1E-16 3.5E-21 126.7 5.7 76 43-118 17-98 (338)
20 2y5c_A Adrenodoxin-like protei 99.6 1.8E-17 6.3E-22 113.8 0.9 76 44-119 20-108 (109)
21 3hui_A Ferredoxin; cytochrome 99.6 1.3E-17 4.5E-22 118.5 -0.5 77 43-119 35-125 (126)
22 2bt6_A Adrenodoxin 1; rutheniu 99.6 1.3E-16 4.4E-21 109.3 1.3 74 43-116 20-108 (108)
23 1l5p_A Ferredoxin; [2Fe-2S] cl 99.6 9.5E-16 3.3E-20 102.6 3.2 67 43-111 13-86 (93)
24 3n9z_C Adrenodoxin; cytochrome 99.4 1.3E-14 4.5E-19 102.5 -2.5 78 42-119 18-110 (123)
25 1ep3_B Dihydroorotate dehydrog 98.0 4.9E-06 1.7E-10 63.2 3.6 48 23-78 190-239 (262)
26 3i9v_3 NADH-quinone oxidoreduc 97.7 1.9E-05 6.3E-10 69.4 3.7 75 43-117 10-97 (783)
27 1kf6_B Fumarate reductase iron 97.4 4.8E-05 1.7E-09 57.6 1.9 54 43-114 27-91 (243)
28 2bs2_B Quinol-fumarate reducta 97.4 5.6E-05 1.9E-09 57.2 2.2 37 45-82 29-73 (241)
29 1qfj_A Protein (flavin reducta 97.3 0.00011 3.7E-09 54.2 2.2 35 22-56 192-229 (232)
30 1t3q_A Quinoline 2-oxidoreduct 97.1 0.00021 7.3E-09 52.1 2.8 35 45-80 24-62 (168)
31 3c8y_A Iron hydrogenase 1; dit 97.0 0.00036 1.2E-08 59.4 3.5 56 44-116 11-75 (574)
32 2eix_A NADH-cytochrome B5 redu 97.0 0.00028 9.5E-09 52.4 2.1 31 22-52 209-241 (243)
33 3lrx_A Putative hydrogenase; a 97.0 0.00047 1.6E-08 49.1 3.2 25 23-47 112-138 (158)
34 2wdq_B Succinate dehydrogenase 96.9 0.00031 1E-08 53.0 2.2 37 44-81 25-70 (238)
35 2gpj_A Siderophore-interacting 96.9 0.00024 8.4E-09 53.8 1.6 35 21-55 188-225 (252)
36 3lyu_A Putative hydrogenase; t 96.9 0.00047 1.6E-08 48.3 3.0 27 23-49 107-135 (142)
37 4eh1_A Flavohemoprotein; struc 96.9 0.00032 1.1E-08 51.9 2.0 36 21-56 198-235 (243)
38 1tvc_A Methane monooxygenase c 96.9 0.00015 5E-09 54.3 0.0 34 23-56 209-244 (250)
39 2r6h_A NADH:ubiquinone oxidore 96.8 0.00013 4.5E-09 55.5 -1.0 32 23-54 254-287 (290)
40 1cqx_A Flavohemoprotein; globi 96.7 0.00026 8.7E-09 56.7 0.2 33 24-56 362-396 (403)
41 1fdr_A Flavodoxin reductase; f 96.7 0.0006 2.1E-08 50.7 2.0 31 22-52 204-237 (248)
42 1gvh_A Flavohemoprotein; oxido 96.6 0.00084 2.9E-08 53.5 2.4 33 24-56 356-390 (396)
43 2h88_B Succinate dehydrogenase 96.6 0.00098 3.4E-08 50.9 2.6 41 51-109 45-91 (252)
44 4g1v_A Flavohemoglobin; three 96.6 0.00087 3E-08 53.7 2.2 33 24-56 356-390 (399)
45 4fk8_A Ferredoxin--NADP reduct 96.5 0.00099 3.4E-08 50.3 2.3 31 22-52 226-258 (271)
46 1umk_A B5R, NADH-cytochrome B5 96.5 0.00076 2.6E-08 50.9 1.6 30 23-52 241-273 (275)
47 2bgi_A Ferredoxin-NADP(H) redu 96.5 0.00097 3.3E-08 50.6 1.9 29 23-51 225-255 (272)
48 2qdx_A Ferredoxin reductase; o 96.4 0.0017 5.6E-08 48.7 2.7 27 23-49 211-239 (257)
49 2cnd_A NADH-dependent nitrate 96.3 0.0015 5.2E-08 49.0 2.2 29 23-51 235-266 (270)
50 3a1f_A Cytochrome B-245 heavy 96.2 0.0023 7.8E-08 45.0 2.5 26 22-47 145-172 (186)
51 1krh_A Benzoate 1,2-dioxygenas 96.1 0.0012 4.2E-08 51.5 0.5 33 23-55 300-334 (338)
52 3jqq_A Ferredoxin NADP reducta 95.1 0.0027 9.3E-08 49.6 -0.8 24 23-46 277-302 (316)
53 2bmw_A Ferredoxin--NADP reduct 95.1 0.012 4.1E-07 45.0 2.8 29 22-50 254-288 (304)
54 2b5o_A FNR, ferredoxin--NADP r 95.0 0.0071 2.4E-07 48.9 1.3 27 23-49 353-381 (402)
55 1fnb_A Ferredoxin-NADP+ reduct 94.8 0.011 3.6E-07 45.7 1.8 22 23-44 265-288 (314)
56 3hrd_D Nicotinate dehydrogenas 94.5 0.018 6.1E-07 41.9 2.4 35 45-80 18-56 (160)
57 3vo2_A Putative uncharacterize 94.3 0.027 9.3E-07 43.4 3.1 22 22-43 260-283 (310)
58 3lo8_A Ferredoxin--NADP reduct 93.9 0.043 1.5E-06 42.1 3.5 22 23-44 262-285 (311)
59 1ffv_A CUTS, iron-sulfur prote 93.8 0.033 1.1E-06 40.5 2.7 35 45-80 18-56 (163)
60 1n62_A Carbon monoxide dehydro 93.7 0.037 1.3E-06 40.4 2.6 34 46-80 19-56 (166)
61 1f20_A Nitric-oxide synthase; 93.7 0.021 7E-07 46.9 1.4 26 23-48 380-407 (435)
62 1tll_A Nitric-oxide synthase, 93.1 0.066 2.2E-06 46.4 3.7 28 23-50 601-635 (688)
63 1rm6_C 4-hydroxybenzoyl-COA re 92.8 0.088 3E-06 38.0 3.5 29 51-80 25-55 (161)
64 4dql_A Bifunctional P-450/NADP 91.9 0.073 2.5E-06 43.1 2.4 21 23-43 337-360 (393)
65 2rc5_A Ferredoxin-NADP reducta 91.1 0.058 2E-06 41.4 0.9 20 27-46 269-291 (314)
66 3vr8_B Iron-sulfur subunit of 90.7 0.12 4.1E-06 40.5 2.4 31 51-82 69-105 (282)
67 1ddg_A Sulfite reductase (NADP 88.2 0.18 6.2E-06 40.4 1.7 22 23-44 320-344 (374)
68 2k02_A Ferrous iron transport 88.0 0.21 7.3E-06 32.7 1.7 38 38-75 20-66 (87)
69 3nvw_A Xanthine dehydrogenase/ 87.0 0.65 2.2E-05 33.8 3.9 34 45-78 18-55 (164)
70 2qtl_A MSR;, methionine syntha 85.7 0.3 1E-05 41.2 1.7 15 23-37 484-499 (539)
71 1xn7_A Hypothetical protein YH 84.6 0.63 2.1E-05 29.6 2.5 38 38-75 20-66 (78)
72 2w3s_A Xanthine dehydrogenase; 84.1 0.88 3E-05 37.8 3.9 27 51-77 24-51 (462)
73 2bpo_A CPR, P450R, NADPH-cytoc 83.0 0.47 1.6E-05 41.0 1.9 21 23-43 628-651 (682)
74 3qe2_A CPR, P450R, NADPH--cyto 80.4 0.53 1.8E-05 40.2 1.2 21 23-43 563-586 (618)
75 3qfs_A CPR, P450R, NADPH--cyto 80.0 0.59 2E-05 38.7 1.4 21 23-43 403-426 (458)
76 1vlb_A Aldehyde oxidoreductase 75.7 1.4 4.8E-05 39.5 2.6 29 51-80 24-54 (907)
77 1dgj_A Aldehyde oxidoreductase 75.1 1.5 5E-05 39.3 2.5 29 51-80 24-54 (907)
78 3unc_A Xanthine dehydrogenase/ 36.5 28 0.00097 32.5 3.9 34 45-78 19-56 (1332)
79 4e6k_G BFD, bacterioferritin-a 24.9 11 0.00038 23.5 -0.7 33 45-78 8-46 (73)
80 3zyv_A AOH1; oxidoreductase, m 21.4 38 0.0013 31.6 1.9 28 51-78 31-60 (1335)
81 2lg4_A Aurelin; antimicrobial 23.9 24 0.00084 19.7 0.0 17 56-73 24-40 (40)
No 1
>2pia_A Phthalate dioxygenase reductase; HET: FMN; 2.00A {Burkholderia cepacia} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.87 E-value=1.6e-22 Score=159.94 Aligned_cols=92 Identities=25% Similarity=0.504 Sum_probs=77.5
Q ss_pred CCCCeeEEcCChhhhh--HhHHHH----------cCCC------------------------Cch--HHHHHHcCCCcCC
Q 045945 22 TRMKFPLVKSPGSLVS--RSVSKA----------FGLK------------------------SSS--FKVSAMAVYKLPY 63 (122)
Q Consensus 22 ~~~~~~YvCGP~~fm~--~~~~~~----------~~~~------------------------~~~--L~a~~~~Gi~i~~ 63 (122)
+.+.++|+|||.+||+ ++++++ |+.+ +++ |++++++|+++||
T Consensus 191 ~~~~~vyvCGP~~m~~~v~~~l~~~~~~~i~~E~F~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ll~a~~~~g~~~~~ 270 (321)
T 2pia_A 191 KPAQHVYCCGPQALMDTVRDMTGHWPSGTVHFESFGATNTNARENTPFTVRLSRSGTSFEIPANRSILEVLRDANVRVPS 270 (321)
T ss_dssp CTTEEEEEESCHHHHHHHHHHTTTSCTTCEEEECCCCCCCCCSCCCCEEEEETTTCCEEEECTTSCHHHHHHHTTCCCCC
T ss_pred CCCCEEEEECCHHHHHHHHHHHHhCCHhhEEEEecCCCCCCCCCCccEEEEEeCCCeEEEECCCCcHHHHHHHcCCCCCC
Confidence 4578999999999999 555442 2211 111 8889999999999
Q ss_pred CCCCcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCC-eEEEe
Q 045945 64 SCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSD-CVIYT 115 (122)
Q Consensus 64 ~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sd-l~I~l 115 (122)
+|+.|.||+|+++|++|++++.+ ..|+++|+ +|++|+||++|.+| ++|++
T Consensus 271 ~C~~G~Cg~C~~~v~~G~~~~~~-~~l~~~e~-~g~~L~C~~~~~~d~~~i~l 321 (321)
T 2pia_A 271 SCESGTCGSCKTALCSGEADHRD-MVLRDDEK-GTQIMVCVSRAKSAELVLDL 321 (321)
T ss_dssp SCSSSSSCTTEEEEEESCEECCC-SSCCTTTT-TTEEETTTCEESSSEEEECC
T ss_pred CCCCCCCCCCEEEEecCcccccc-CCCChHHH-CCeEEEeEeEECCCcEEEeC
Confidence 99999999999999999999887 68999998 99999999999998 88864
No 2
>1awd_A Ferredoxin; electron transport, eukaryotic, green ALGA, electron transfer, metalloprotein; 1.40A {'chlorella' fusca} SCOP: d.15.4.1
Probab=99.83 E-value=4.4e-21 Score=128.77 Aligned_cols=79 Identities=57% Similarity=0.952 Sum_probs=71.9
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCCCcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCCeEEEecCCCC
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~l~~~~~ 120 (122)
.+.+++++ |++++++|+.+|++|+.|.||+|+++|++|++++.+...|+++++++|++|+||++|.+|++|++++++.
T Consensus 13 ~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d~~i~~~~~~~ 92 (94)
T 1awd_A 13 TIECPEDTYILDAAEEAGLDLPYSCRAGACSSCAGKVESGEVDQSDQSFLDDAQMGKGFVLTCVAYPTSDVTILTHQEAA 92 (94)
T ss_dssp EEECCTTSCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESSCEEEECCCGGG
T ss_pred EEEECCCCcHHHHHHHcCCCCCcCCCCCcCCCCEEEEEeCCcCccccccCCHHHHhCCcEEeeECEECCCEEEEecchhc
Confidence 45566666 9999999999999999999999999999999998887789999999999999999999999999998775
Q ss_pred C
Q 045945 121 L 121 (122)
Q Consensus 121 ~ 121 (122)
+
T Consensus 93 ~ 93 (94)
T 1awd_A 93 L 93 (94)
T ss_dssp G
T ss_pred c
Confidence 4
No 3
>1czp_A Ferredoxin I; [2Fe-2S] protein, crystal reduced with dithionite, electron; 1.17A {Nostoc SP} SCOP: d.15.4.1 PDB: 1ewy_C* 1fxa_A 1qt9_A 1qog_A 1j7c_A 1j7b_A 1qof_A 1qob_A 1j7a_A 1qoa_A 1rfk_A 3p63_A 4fxc_A 3ab5_A 1roe_A 2cjn_A 2cjo_A 1off_A 1dox_A 1doy_A ...
Probab=99.83 E-value=6.1e-21 Score=128.95 Aligned_cols=79 Identities=61% Similarity=1.046 Sum_probs=71.6
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCCCcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCCeEEEecCCCC
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~l~~~~~ 120 (122)
.+.+++++ |++++++|+++|++|+.|.||+|+++|++|++.+.+...|+++++++|++|+||++|.+|++|++++++.
T Consensus 17 ~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d~~v~~~~~~~ 96 (98)
T 1czp_A 17 EIEVPDDEYILDAAEEQGYDLPFSCRAGACSTCAGKLVSGTVDQSDQSFLDDDQIEAGYVLTCVAYPTSDVVIQTHKEED 96 (98)
T ss_dssp EEEEETTSCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESSCEEEECCCTTT
T ss_pred EEEeCCCCCHHHHHHHcCCCccCCCCCCCCCCCeEEEccCCcCccccccCCHHHhhCCeEEeeeCEECCCEEEEeccccc
Confidence 44555555 9999999999999999999999999999999998887789999999999999999999999999998877
Q ss_pred C
Q 045945 121 L 121 (122)
Q Consensus 121 ~ 121 (122)
|
T Consensus 97 ~ 97 (98)
T 1czp_A 97 L 97 (98)
T ss_dssp T
T ss_pred c
Confidence 5
No 4
>1frd_A Heterocyst [2Fe-2S] ferredoxin; electron transport; 1.70A {Nostoc SP} SCOP: d.15.4.1
Probab=99.83 E-value=5.8e-21 Score=128.74 Aligned_cols=79 Identities=44% Similarity=0.889 Sum_probs=71.9
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCCCcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCCeEEEecCCCC
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~l~~~~~ 120 (122)
.+.+++++ |++++++|+++||+|+.|.||+|+++|++|++.+.+...|+++++++|++|+||++|.+|++|++++++.
T Consensus 17 ~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaC~~~~~~d~~v~~~~~~~ 96 (98)
T 1frd_A 17 TIEIDEETTILDGAEENGIELPFSCHSGSCSSCVGKVVEGEVDQSDQIFLDDEQMGKGFALLCVTYPRSNCTIKTHQEPY 96 (98)
T ss_dssp EEEEETTSCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEEGGGCEESSSEEEECCCGGG
T ss_pred EEEeCCCCcHHHHHHHcCCCcccCCCCCCCCCCEEEEEeCCccccccccCCHHHhhCCcEEEeECEECCCEEEEecchhh
Confidence 44556665 9999999999999999999999999999999998887899999999999999999999999999998876
Q ss_pred C
Q 045945 121 L 121 (122)
Q Consensus 121 ~ 121 (122)
|
T Consensus 97 ~ 97 (98)
T 1frd_A 97 L 97 (98)
T ss_dssp C
T ss_pred c
Confidence 5
No 5
>1frr_A Ferredoxin I; electron transfer(iron-sulfur protein); 1.80A {Equisetum arvense} SCOP: d.15.4.1
Probab=99.82 E-value=1e-20 Score=126.57 Aligned_cols=79 Identities=61% Similarity=1.031 Sum_probs=71.6
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCCCcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCCeEEEecCCCC
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~l~~~~~ 120 (122)
.+.+++++ |++++++|+++|++|+.|.||+|+++|++|++.+.+...|+++++++|++|+||+++.+|++|++++++.
T Consensus 14 ~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~~~~~L~~~~~~~g~~LaC~~~~~~~~~v~~~~~~~ 93 (95)
T 1frr_A 14 TLDVPEGTTILDAAEEAGYDLPFSCRAGACSSCLGKVVSGSVDESEGSFLDDGQMEEGFVLTCIAIPESDLVIETHKEEE 93 (95)
T ss_dssp EEEECTTCCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEESSCEEEECCCTTT
T ss_pred EEEeCCCCcHHHHHHHcCCCCCCCCCCcCCCCCEEEEEeCCccccccccCCHHHHhCCcEEeeECEECCCEEEEEcchhh
Confidence 44566666 9999999999999999999999999999999999887889999999999999999999999999988765
Q ss_pred C
Q 045945 121 L 121 (122)
Q Consensus 121 ~ 121 (122)
+
T Consensus 94 ~ 94 (95)
T 1frr_A 94 L 94 (95)
T ss_dssp T
T ss_pred c
Confidence 4
No 6
>1a70_A Ferredoxin; iron-sulfur protein, photosynthesis, electron transport; 1.70A {Spinacia oleracea} SCOP: d.15.4.1 PDB: 1pfd_A
Probab=99.82 E-value=5.5e-21 Score=129.11 Aligned_cols=79 Identities=51% Similarity=0.911 Sum_probs=70.9
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCCCcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCCeEEEecCCCC
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~l~~~~~ 120 (122)
.+.+++++ |++++++|+++|++|+.|.||+|+++|++|++.+.+...|+++++++|++|+||++|.+|++|++++++.
T Consensus 15 ~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d~~v~~~~~~~ 94 (97)
T 1a70_A 15 EFQCPDDVYILDAAEEEGIDLPYSCRAGSCSSCAGKLKTGSLNQDDQSFLDDDQIDEGWVLTCAAYPVSDVTIETHKKEE 94 (97)
T ss_dssp EEEEETTSCHHHHHHHTTCCCCCSSSSSCSSTTEEEEEESCEECTTCCSSCHHHHHHTEEEGGGCEESSCEEEECCCGGG
T ss_pred EEEeCCCCcHHHHHHHcCCCcccCCCCcCCCCCeEEEccCCcCccccccCCHHHhhCCeEEEeECEECCCEEEEeCchhh
Confidence 34555555 9999999999999999999999999999999998887889998888999999999999999999998765
Q ss_pred C
Q 045945 121 L 121 (122)
Q Consensus 121 ~ 121 (122)
+
T Consensus 95 ~ 95 (97)
T 1a70_A 95 L 95 (97)
T ss_dssp C
T ss_pred c
Confidence 4
No 7
>1wri_A Ferredoxin II, ferredoxin; electron transport; 1.20A {Equisetum arvense} SCOP: d.15.4.1
Probab=99.82 E-value=7.9e-21 Score=127.45 Aligned_cols=78 Identities=60% Similarity=1.037 Sum_probs=70.8
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCCCcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCCeEEEecCCCC
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~l~~~~~ 120 (122)
.+.+++++ |++++++| .+|++|+.|.||+|+++|++|++.+.+...|+++++++|++|+||++|.+|++|+++++++
T Consensus 14 ~~~~~~g~tlL~a~~~~g-~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~~~~~g~~LaCq~~~~~d~~v~~~~~~~ 92 (93)
T 1wri_A 14 TFDVEPGERLIDIGSEKA-DLPLSCQAGACSTCLGKIVSGTVDQSEGSFLDDEQIEQGYVLTCIAIPESDVVIETHKEDE 92 (93)
T ss_dssp EEEECTTSCHHHHHHHHS-CCCCSSSSSSSSTTEEEEEESCEECTTCCSCCHHHHHTTEEETTTCEESSCEEEECCCGGG
T ss_pred EEEECCCCcHHHHHHHCc-CCCCCCCCCCCCCCEEEEecCccCccccccCCHHHHhCCcEEeeeCEECCCEEEEeccccc
Confidence 44566665 99999999 9999999999999999999999998887889999999999999999999999999998876
Q ss_pred C
Q 045945 121 L 121 (122)
Q Consensus 121 ~ 121 (122)
|
T Consensus 93 ~ 93 (93)
T 1wri_A 93 L 93 (93)
T ss_dssp C
T ss_pred C
Confidence 4
No 8
>1iue_A Ferredoxin; electron transport, iron-sulfur; 1.70A {Plasmodium falciparum} SCOP: d.15.4.1
Probab=99.81 E-value=6.1e-21 Score=129.10 Aligned_cols=78 Identities=50% Similarity=0.921 Sum_probs=70.0
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCCCcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCCeEEEecCCCC
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKESE 120 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~l~~~~~ 120 (122)
.+.+++++ |++++++|+++|++|+.|.||+|+++|++|++++.+...|+++++++|++|+||++|.+|++|++++++.
T Consensus 15 ~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~e~~~L~~~e~~~g~~LaCq~~~~~d~~i~~~~~~~ 94 (98)
T 1iue_A 15 KIECNEDEYILDASERQNVELPYSCRGGSCSTCAAKLVEGEVDNDDQSYLDEEQIKKKYILLCTCYPKSDCVIETHKEDE 94 (98)
T ss_dssp EEEEETTSCHHHHHHHTTCCCCCSSCSSSSSTTEEEEEESCEECTTCCSSCHHHHHTTEEEGGGCEESSCEEEECCCHHH
T ss_pred EEEeCCCCcHHHHHHHcCCCCCCCCCCCcCCCCEEEEeeCCccccccccCCHHHHhCCeEEEeECEECCCeEEEeCChHh
Confidence 34555555 9999999999999999999999999999999998887799999999999999999999999999987653
No 9
>1jq4_A Methane monooxygenase component C; [2Fe-2S] ferredoxin, oxidoreductase; NMR {Methylococcus capsulatus str} SCOP: d.15.4.2
Probab=99.75 E-value=9.5e-20 Score=122.91 Aligned_cols=76 Identities=32% Similarity=0.482 Sum_probs=66.3
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCCCcccCCCeeeeeeccccC--CCCCCCChhcccCCeEEeeceEECCCeEEEecCC
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQ--SDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 118 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl~G~v~~--~~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~l~~~ 118 (122)
.+.+++++ |++++++|+++|++|+.|.||+|+++|++|++.+ .+...|+++++++|++|+||++|.+|++|+++++
T Consensus 18 ~~~~~~g~tlL~a~~~~gi~i~~~C~~G~Cg~C~v~v~~G~~~~~~~e~~~L~~~~~~~g~~LaCq~~~~~d~~v~~~~~ 97 (98)
T 1jq4_A 18 RFECRSDEDVITAALRQNIFLMSSCREGGCATCKALCSEGDYDLKGCSVQALPPEEEEEGLVLLCRTYPKTDLEIELPYT 97 (98)
T ss_dssp EEEEESCCTHHHHHHHHTCCCCCSCCSSCCCCCCBCEEECCCCCCCSCTTTSCHHHHHHHCBCTTTCCSSCCSEEECSCC
T ss_pred EEEeCCCChHHHHHHHcCCCCcCCCCCCCCCCCEEEEEcCccccCcccccccCHHHhcCCcEEEeeCEECCCEEEEecCC
Confidence 44555555 8999999999999999999999999999999886 3446899988888999999999999999998753
No 10
>1doi_A 2Fe-2S ferredoxin; halophilic protein, redox protein, iron-sulfur, electron transport; 1.90A {Haloarcula marismortui} SCOP: d.15.4.1 PDB: 1e0z_A* 1e10_A
Probab=99.74 E-value=3.1e-18 Score=121.89 Aligned_cols=74 Identities=31% Similarity=0.674 Sum_probs=65.7
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCCCcccCCCeeeeeeccccCCCCCCCChhc-ccCCeEEeeceEECCC-eEEEec
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQ-MEKGYVLTCIAYPKSD-CVIYTH 116 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e-~~~g~~LaCqs~~~sd-l~I~l~ 116 (122)
.+.+++++ |++++++|+++|++|+.|.||+|+++|++|++++.+...|++++ +++|++|+||++|.+| ++|++.
T Consensus 39 ~v~v~~g~tlL~aa~~~Gi~i~~~C~~G~CgtC~v~v~~G~v~~~e~~~L~~~e~~~~g~rLaCq~~~~~d~i~i~~~ 116 (128)
T 1doi_A 39 SLEVNEGEYILEAAEAQGYDWPFSCRAGACANCAAIVLEGDIDMDMQQILSDEEVEDKNVRLTCIGSPDADEVKIVYN 116 (128)
T ss_dssp EEECCTTSCHHHHHHHTTCCCCCSSSSSSSSTTEEEEEESCEEECCCSSSCHHHHHTSCEEEGGGEEECSSEEEEEEC
T ss_pred EEEECCCCcHHHHHHHcCCCCccCCCccCCCCCEeEEecCCcCchhhccCCHhHhccCCEEEEEEeEEcCCeEEEEec
Confidence 55677766 99999999999999999999999999999999988777899866 6889999999999999 787754
No 11
>3lxf_A Ferredoxin; iron, iron-sulfur, metal-binding, metal protein; 2.30A {Novosphingobium aromaticivorans} SCOP: d.15.4.0
Probab=99.71 E-value=3.5e-18 Score=117.17 Aligned_cols=77 Identities=17% Similarity=0.221 Sum_probs=65.3
Q ss_pred HcCCCCch--HHHHHHcCCC-cCCCCC-CcccCCCeeeeeeccccCCC------CCCCCh-hcccCCeEEeeceEECCC-
Q 045945 43 AFGLKSSS--FKVSAMAVYK-LPYSCR-AGACSTCAGLMVSGSVDQSD------GSFLDD-NQMEKGYVLTCIAYPKSD- 110 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~-i~~~Cr-~G~CGtCkv~vl~G~v~~~~------~~~Ls~-~e~~~g~~LaCqs~~~sd- 110 (122)
.+.+++++ |+++.++|++ ++++|+ .|.||+|+++|++|++++.. ...|++ +++++|+||+||+++.+|
T Consensus 14 ~~~~~~g~tll~a~~~~gi~~i~~~C~G~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~g~rLaCq~~~~~dl 93 (104)
T 3lxf_A 14 EIQAEPGLSLMEALRDAGIDELLALCGGCCSCATCHVLVAPAFADRLPALSGDENDLLDSSDHRTPHSRLSCQITINDKL 93 (104)
T ss_dssp EEECCTTSBHHHHHHHTTCTTCCCTTCSSSSCSTTEEEECGGGGGGSCCCCHHHHHHHHTSTTCCTTEEEGGGCBCCGGG
T ss_pred EEEECCCChHHHHHHHcCCCCCCcCCCCCCCCCCCEEEECCcccccCCCCCHHHHHHhccccccCCCcEEEeeCEEccCC
Confidence 45566666 9999999999 999999 99999999999999876532 135666 678889999999999999
Q ss_pred --eEEEecCCC
Q 045945 111 --CVIYTHKES 119 (122)
Q Consensus 111 --l~I~l~~~~ 119 (122)
++|++++++
T Consensus 94 ~gl~v~ip~~~ 104 (104)
T 3lxf_A 94 EGLEVEIAPED 104 (104)
T ss_dssp TTCEEEECCCC
T ss_pred CCEEEEecCCC
Confidence 999999764
No 12
>3ah7_A [2Fe-2S]ferredoxin; [2Fe-2S] cluster, iron-sulfur cluster biosynthes pseudomonas, metal binding protein; 1.90A {Pseudomonas putida}
Probab=99.70 E-value=9.6e-18 Score=115.75 Aligned_cols=77 Identities=21% Similarity=0.354 Sum_probs=63.6
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCC-CcccCCCeeeeeeccccCCC-----CCCCChh-cccCCeEEeeceEEC-CCeE
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCR-AGACSTCAGLMVSGSVDQSD-----GSFLDDN-QMEKGYVLTCIAYPK-SDCV 112 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr-~G~CGtCkv~vl~G~v~~~~-----~~~Ls~~-e~~~g~~LaCqs~~~-sdl~ 112 (122)
.+.+++++ |++++++|+++||+|+ .|.||+|+++|++|.+.... ...|+++ ++++|++|+||+++. +|++
T Consensus 18 ~v~~~~g~tlL~aa~~~Gi~i~~~C~g~G~CgtC~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~~~~~~dl~ 97 (113)
T 3ah7_A 18 TVEVKPGTNILELAHDHHIEMESACGGVKACTTCHCIVRKGFDSLEEADELEEDMLDKAWGLEAQSRLGCQVFVADEDLT 97 (113)
T ss_dssp EEECCTTCBHHHHHHHTTCCCCCTTCSSSSCSTTEEEEEESGGGSCCCCHHHHHHHTTSTTCCTTEEEGGGCBCCSSCEE
T ss_pred EEEECCCCcHHHHHHHcCCCCCcCCCCCCCcCCCEEEEcCCcccCCCCCHHHHHhhhcccccCCCcEEeeeCEEeCCCEE
Confidence 55677766 9999999999999998 79999999999999754432 1246654 678899999999998 8999
Q ss_pred EEecCCC
Q 045945 113 IYTHKES 119 (122)
Q Consensus 113 I~l~~~~ 119 (122)
|++++++
T Consensus 98 v~~~~~~ 104 (113)
T 3ah7_A 98 IEIPKYS 104 (113)
T ss_dssp EECCSCC
T ss_pred EEECchh
Confidence 9998754
No 13
>1b9r_A Protein (terpredoxin); structure from molmol, ferredoxin; NMR {Pseudomonas SP} SCOP: d.15.4.1
Probab=99.68 E-value=1.6e-18 Score=118.22 Aligned_cols=76 Identities=16% Similarity=0.323 Sum_probs=62.7
Q ss_pred HcCCCCch--HHHHHHcCCC-cCCCCC-CcccCCCeeeeeecccc------CCCCCCCC--hhcccCCeEEeeceEECC-
Q 045945 43 AFGLKSSS--FKVSAMAVYK-LPYSCR-AGACSTCAGLMVSGSVD------QSDGSFLD--DNQMEKGYVLTCIAYPKS- 109 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~-i~~~Cr-~G~CGtCkv~vl~G~v~------~~~~~~Ls--~~e~~~g~~LaCqs~~~s- 109 (122)
.+.+++++ |++++++|++ ++++|+ .|.||+|+++|++|.++ ..+...|+ +.++++|+||+||+++.+
T Consensus 14 ~~~~~~g~tlL~aa~~~gi~~i~~~C~g~G~CgtC~v~v~~G~~~~l~~~~~~e~~~L~~~~~~~~~g~rLaCq~~~~~~ 93 (105)
T 1b9r_A 14 AVDAQDGQSLMEVATQNGVPGIVAECGGSCVCATCRIEIEDAWVEIVGEANPDENDLLQSTGEPMTAGTRLSCQVFIDPS 93 (105)
T ss_dssp EEECCTTCCTTHHHHHHTCCCCCCSSTTSSCCCCCCCEECTTTHHHHTCCCTTHHHHHHTSCCCCCTTBSCGGGCCCCTT
T ss_pred EEEECCCChHHHHHHHcCCCCcCcCCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEeeeeCEecCC
Confidence 45667666 9999999999 999999 79999999999999433 22234566 577889999999999999
Q ss_pred --CeEEEecCC
Q 045945 110 --DCVIYTHKE 118 (122)
Q Consensus 110 --dl~I~l~~~ 118 (122)
+++|++++.
T Consensus 94 ~~~l~v~~p~~ 104 (105)
T 1b9r_A 94 MDGLIVRVPLP 104 (105)
T ss_dssp STTEEEECCSC
T ss_pred CCcEEEEecCC
Confidence 699999764
No 14
>1xlq_A Putidaredoxin, PDX; [2Fe-2S], ferredoxin, oxidoreductase; 1.45A {Pseudomonas putida} SCOP: d.15.4.1 PDB: 1xlp_A 1oqr_A 1r7s_A 1pdx_A 1yji_A 1yjj_A 1oqq_A 1xln_A 1xlo_A 3lb8_C* 1put_A 1gpx_A
Probab=99.68 E-value=3.2e-18 Score=116.85 Aligned_cols=77 Identities=12% Similarity=0.211 Sum_probs=62.3
Q ss_pred HcCCCCch--HHHHHHcCCC-cCCCCC-CcccCCCeeeeeeccccCC------CCCCCChhc-c-cCCeEEeeceEECC-
Q 045945 43 AFGLKSSS--FKVSAMAVYK-LPYSCR-AGACSTCAGLMVSGSVDQS------DGSFLDDNQ-M-EKGYVLTCIAYPKS- 109 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~-i~~~Cr-~G~CGtCkv~vl~G~v~~~------~~~~Ls~~e-~-~~g~~LaCqs~~~s- 109 (122)
.+.+++|+ |++++++|++ ++++|+ .|.||+|+++|++|.++.. +...|++.+ + ++|++|+||+++.+
T Consensus 14 ~~~~~~g~tlLeaa~~~gi~~i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLaCq~~~~~d 93 (106)
T 1xlq_A 14 ELDVADGVSLMQAAVSNGIYDIVGDCGGSASCATCHVYVNEAFTDKVPAANEREIGMLESVTAELKPNSRLCCQIIMTPE 93 (106)
T ss_dssp EEECCTTCBHHHHHHHTTCTTSCCTTCSSSSSCTTEEEECTTTGGGSCCCCHHHHHHHTTCSSCCCTTEEEGGGCBCCGG
T ss_pred EEEECCCCcHHHHHHHcCCCCCCcCCCCCcccCcCEEEECCcccccCCCCCHHHHHHhhcccccCCCCcEeeeeeEeecC
Confidence 45567666 9999999999 999996 8999999999999955432 123566655 6 78999999999999
Q ss_pred --CeEEEecCCC
Q 045945 110 --DCVIYTHKES 119 (122)
Q Consensus 110 --dl~I~l~~~~ 119 (122)
+++|++++.+
T Consensus 94 ~~~l~v~~p~~~ 105 (106)
T 1xlq_A 94 LDGIVVDVPDRQ 105 (106)
T ss_dssp GTTEEEECCSCC
T ss_pred CCCEEEEecCcc
Confidence 5899998654
No 15
>1uwm_A Ferredoxin VI, FDVI; electron transport, metal-binding, iron-sulfur, iron, 2Fe-2S; 2.0A {Rhodobacter capsulatus} SCOP: d.15.4.1 PDB: 1e9m_A
Probab=99.67 E-value=3.6e-18 Score=116.61 Aligned_cols=77 Identities=21% Similarity=0.238 Sum_probs=63.1
Q ss_pred HcCCCCch--HHHHHHcCCC-cCCCCC-CcccCCCeeeeeeccccCCC------CCCCChh-ccc-CCeEEeeceEECC-
Q 045945 43 AFGLKSSS--FKVSAMAVYK-LPYSCR-AGACSTCAGLMVSGSVDQSD------GSFLDDN-QME-KGYVLTCIAYPKS- 109 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~-i~~~Cr-~G~CGtCkv~vl~G~v~~~~------~~~Ls~~-e~~-~g~~LaCqs~~~s- 109 (122)
.+.+++++ |++++++|++ ++++|+ .|.||+|+++|++|.+++.. ...|++. +++ +|++|+||+++.+
T Consensus 14 ~~~~~~g~tlL~aa~~~gi~~i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~e~~~L~~~~~~~~~g~rLaCq~~~~~d 93 (106)
T 1uwm_A 14 EVEAKPGLTVMEAARDNGVPGIDADCGGACACSTCHAYVDPAWVDKLPKALPTETDMIDFAYEPNPATSRLTCQIKVTSL 93 (106)
T ss_dssp EEECCTTSBHHHHHHTTTCTTCCCTTSSSSSSCTTEEEECHHHHTTSCCCCHHHHHHHTTSSSCCTTTEEEGGGCBCCGG
T ss_pred EEEECCCCcHHHHHHHcCCCCcccCCCCCCCcCcCEEEECCcccccCCCCCHHHHHHhcCccccCCCCcEecccCEEccC
Confidence 45667766 9999999999 999996 89999999999999655421 2356665 577 8999999999999
Q ss_pred --CeEEEecCCC
Q 045945 110 --DCVIYTHKES 119 (122)
Q Consensus 110 --dl~I~l~~~~ 119 (122)
+++|++++.+
T Consensus 94 ~~~l~v~~p~~~ 105 (106)
T 1uwm_A 94 LDGLVVHLPEKQ 105 (106)
T ss_dssp GTTEEEECCSCC
T ss_pred CCCEEEEecCCC
Confidence 5899998764
No 16
>3zyy_X Iron-sulfur cluster binding protein; iron-sulfur-binding protein, ashka family, ATPase; 2.20A {Carboxydothermus hydrogenoformans}
Probab=99.67 E-value=4.1e-17 Score=141.24 Aligned_cols=80 Identities=28% Similarity=0.525 Sum_probs=73.2
Q ss_pred HHcCCCCch--HHHHHHcCCCcCCCCC-CcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCCeEEEecCC
Q 045945 42 KAFGLKSSS--FKVSAMAVYKLPYSCR-AGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIYTHKE 118 (122)
Q Consensus 42 ~~~~~~~~~--L~a~~~~Gi~i~~~Cr-~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~l~~~ 118 (122)
+.+.+++++ |++++++|++++|+|+ +|.||+|+++|++|++++.+...|+++++++|++|+||++|.+|++|++++.
T Consensus 13 ~~v~v~~G~tLLeAa~~aGi~ip~~C~G~G~CGtC~v~V~~G~v~~~e~~~Ls~~e~~~G~rLaCqa~~~sDl~Ielp~~ 92 (631)
T 3zyy_X 13 KEVAISENTNLMEALNLAGINIKTVCGGAGTCGKCLVRVVDGQKRVESYGKLKQEEIAQGYVLACQTYPESDLIIEIPFD 92 (631)
T ss_dssp EEEEECTTSCHHHHHHHHTCCCCCSCCCSSCCSTTEEEEEESCEEESCCTTCCHHHHHTTEEETTTEEECSSEEEECCTT
T ss_pred eEEEECCCCcHHHHHHHcCCCCCcCCCCCCcCCCCEEEEeeCcccccccccCCHHHhcCCcEEeeeCEECCCEEEEecch
Confidence 456677776 9999999999999999 9999999999999999998877899999999999999999999999999987
Q ss_pred CCC
Q 045945 119 SEL 121 (122)
Q Consensus 119 ~~~ 121 (122)
+++
T Consensus 93 ~~~ 95 (631)
T 3zyy_X 93 SRL 95 (631)
T ss_dssp SSC
T ss_pred hhh
Confidence 663
No 17
>2wlb_A ETP1-FD, electron transfer protein 1, mitochondrial; iron-sulfur, iron, transport, ferredoxin, adrenodoxin-like, electron transport; 2.60A {Schizosaccharomyces pombe}
Probab=99.67 E-value=1e-17 Score=113.74 Aligned_cols=74 Identities=19% Similarity=0.254 Sum_probs=61.3
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCC-CcccCCCeeeeeeccccCCCC------CCCCh-hcccCCeEEeeceEECCC--
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCR-AGACSTCAGLMVSGSVDQSDG------SFLDD-NQMEKGYVLTCIAYPKSD-- 110 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr-~G~CGtCkv~vl~G~v~~~~~------~~Ls~-~e~~~g~~LaCqs~~~sd-- 110 (122)
.+.+++++ |++++++|++++++|+ .|.||+|+++|.+|++++... ..|+. .++++|++|+||+++.+|
T Consensus 17 ~~~~~~g~tlL~a~~~~gi~i~~~C~g~G~Cg~C~v~v~~g~~~~~~~~~~~E~~~L~~~~~~~~g~rLaCq~~~~~d~~ 96 (103)
T 2wlb_A 17 MIEGNEGDSILDLAHANNIDLEGACEGSVACSTCHVIVDPEHYELLDPPEEDEEDMLDLAFGLEETSRLGCQVLLRKDLD 96 (103)
T ss_dssp EEEECTTCBHHHHHHHTTCCCCCTTTTSSCCSTTEEEECHHHHHHSCCCCHHHHHHHTTBTTCCTTEEEGGGCBCCGGGT
T ss_pred EEEECCCCHHHHHHHHcCCCcCcCCCCCCCcCCCEEEECCCchhccCCCCHHHHHHHhcccCCCCCcEeeEeeEeCCCCC
Confidence 44556665 9999999999999999 899999999999998876542 14554 357789999999999999
Q ss_pred -eEEEec
Q 045945 111 -CVIYTH 116 (122)
Q Consensus 111 -l~I~l~ 116 (122)
++|+++
T Consensus 97 ~l~v~lp 103 (103)
T 2wlb_A 97 GIRVRIP 103 (103)
T ss_dssp TEEEECC
T ss_pred cEEEEcC
Confidence 999875
No 18
>1i7h_A Ferredoxin; 2Fe-2S,electron transport; 1.70A {Escherichia coli} SCOP: d.15.4.1
Probab=99.66 E-value=4.7e-17 Score=112.08 Aligned_cols=77 Identities=21% Similarity=0.347 Sum_probs=62.2
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCC-CcccCCCeeeeeeccccCCCCC-----CCChh-cccCCeEEeeceEEC-CCeE
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCR-AGACSTCAGLMVSGSVDQSDGS-----FLDDN-QMEKGYVLTCIAYPK-SDCV 112 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr-~G~CGtCkv~vl~G~v~~~~~~-----~Ls~~-e~~~g~~LaCqs~~~-sdl~ 112 (122)
.+.+++++ |++++++|+.+|++|+ .|.||+|+++|++|.+.+.... .|+.. ++++|++|+||+++. +|++
T Consensus 18 ~~~~~~g~tlL~a~~~~gi~i~~~C~~~G~Cg~C~v~v~~G~~~~~~~~~~e~~~L~~~~~~~~g~rLaCq~~~~~~dl~ 97 (111)
T 1i7h_A 18 VLEANSGETILDAALRNGIEIEHACEKSCACTTCHCIVREGFDSLPESSEQEDDMLDKAWGLEPESRLSCQARVTDEDLV 97 (111)
T ss_dssp EEECCTTCBHHHHHHHTTCCCCCTTSSSSCCSTTEEEEEECGGGSCCCCHHHHHHHTTCTTCCTTEEETTTCBCCSSCEE
T ss_pred EEEeCCCCcHHHHHHHcCCCCcccCCCCCcCCCCEEEEccCcccCCCCCHHHHHHhhhccccCCCcEEEEEEEEeCCCEE
Confidence 45566666 9999999999999995 9999999999999998876422 23322 456789999999996 8999
Q ss_pred EEecCCC
Q 045945 113 IYTHKES 119 (122)
Q Consensus 113 I~l~~~~ 119 (122)
|++++.+
T Consensus 98 v~~~~~~ 104 (111)
T 1i7h_A 98 VEIPRYT 104 (111)
T ss_dssp EECCSCC
T ss_pred EEEChHH
Confidence 9998643
No 19
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=99.65 E-value=1e-16 Score=126.74 Aligned_cols=76 Identities=26% Similarity=0.507 Sum_probs=67.4
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCCCCcccCCCeeeeeeccccCC----CCCCCChhcccCCeEEeeceEECCCeEEEec
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSCRAGACSTCAGLMVSGSVDQS----DGSFLDDNQMEKGYVLTCIAYPKSDCVIYTH 116 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl~G~v~~~----~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~l~ 116 (122)
.+.+++++ |++++++|++++++|+.|.||+|+++|++|++.+. +...|+++++++|++|+||+++.+|++|+++
T Consensus 17 ~~~~~~g~tll~a~~~~gi~i~~~C~~g~Cg~C~v~v~~G~~~~~~~~~~~~~l~~~~~~~g~~LaCq~~~~~~~~v~~~ 96 (338)
T 1krh_A 17 FICIAQGETLSDAAYRQQINIPMDCREGECGTCRAFCESGNYDMPEDNYIEDALTPEEAQQGYVLACQCRPTSDAVFQIQ 96 (338)
T ss_dssp EEEECTTCCHHHHHHHTTCCCSCSCSSSSSCTTEEEEEECCEECCGGGSCTTTCCHHHHHHTEEETTTCEESSSEEEEES
T ss_pred EEEeCCCCcHHHHHHHcCCCcccCCCCcCCCCCEEEEecCcEecccCccccccCCHHHHhCCeEEEEeCEECCCeEEEEe
Confidence 44566666 99999999999999999999999999999998762 4578999999999999999999999999997
Q ss_pred CC
Q 045945 117 KE 118 (122)
Q Consensus 117 ~~ 118 (122)
+.
T Consensus 97 ~~ 98 (338)
T 1krh_A 97 AS 98 (338)
T ss_dssp SC
T ss_pred cc
Confidence 65
No 20
>2y5c_A Adrenodoxin-like protein, mitochondrial; electron transport, iron-sulfur cluster biogenesis; 1.70A {Homo sapiens}
Probab=99.64 E-value=1.8e-17 Score=113.81 Aligned_cols=76 Identities=18% Similarity=0.236 Sum_probs=61.8
Q ss_pred cCCCCch--HHHHHHcCCCcCCCCCC-cccCCCeeeeeeccccCCC------CCCCCh-hcccCCeEEeeceEECCC---
Q 045945 44 FGLKSSS--FKVSAMAVYKLPYSCRA-GACSTCAGLMVSGSVDQSD------GSFLDD-NQMEKGYVLTCIAYPKSD--- 110 (122)
Q Consensus 44 ~~~~~~~--L~a~~~~Gi~i~~~Cr~-G~CGtCkv~vl~G~v~~~~------~~~Ls~-~e~~~g~~LaCqs~~~sd--- 110 (122)
+.+++|+ |++++++|+++|++|+. |.||+|+++|++|.+++.. ...|+. .++++|+||+||+++.+|
T Consensus 20 ~~~~~g~tlL~aa~~~gi~i~~~C~g~G~CgtC~v~v~~g~~~~l~~~~~~E~~~L~~~~~~~~g~rLaCq~~~~~d~~~ 99 (109)
T 2y5c_A 20 VSGRVGDNVLHLAQRHGVDLEGACEASLACSTCHVYVSEDHLDLLPPPEEREDDMLDMAPLLQENSRLGCQIVLTPELEG 99 (109)
T ss_dssp EEEETTCBHHHHHHHTTCCCCCTTSSSSSCCTTEEEECHHHHTTSCCCCHHHHHHHHTSTTCCTTEEEGGGCBCCGGGTT
T ss_pred EEECCCCcHHHHHHHcCCCCCcCCCCCcCcCccEEEECCcchhhcCCCCHHHHHHHhccccCCCCcEeeEEeEEecCCCe
Confidence 4455665 99999999999999985 9999999999999766432 124552 567889999999999997
Q ss_pred eEEEecCCC
Q 045945 111 CVIYTHKES 119 (122)
Q Consensus 111 l~I~l~~~~ 119 (122)
++|++++.+
T Consensus 100 ~~v~ip~~~ 108 (109)
T 2y5c_A 100 AEFTLPKIT 108 (109)
T ss_dssp CEEECCSCC
T ss_pred EEEEecCCC
Confidence 999998754
No 21
>3hui_A Ferredoxin; cytochrome P450, electron transfer, iron, iron-sulfur, metal-binding, electron transport; 2.01A {Rhodopseudomonas palustris}
Probab=99.64 E-value=1.3e-17 Score=118.48 Aligned_cols=77 Identities=14% Similarity=0.293 Sum_probs=64.1
Q ss_pred HcCCCCch--HHHHHHcCCC-cCCCCC-CcccCCCeeeeeeccccCC------CCCCCC-hhcccCCeEEeeceEECCC-
Q 045945 43 AFGLKSSS--FKVSAMAVYK-LPYSCR-AGACSTCAGLMVSGSVDQS------DGSFLD-DNQMEKGYVLTCIAYPKSD- 110 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~-i~~~Cr-~G~CGtCkv~vl~G~v~~~------~~~~Ls-~~e~~~g~~LaCqs~~~sd- 110 (122)
.+.+++++ |++++++|++ ++++|+ .|.||+|+++|++|+++.. +...|+ .+++++|+||+||+++.+|
T Consensus 35 ~v~~~~G~tLL~aa~~~gi~gi~~~C~G~G~CgtC~v~v~~G~~~~l~~~~~~E~~~L~~~~e~~~g~RLaCQ~~~~~dl 114 (126)
T 3hui_A 35 TVEVEEGATVMEAAIRNAIPGVEAECGGACACATCHVYVDEAWREKVGGPSPMEEDMLDFGYDVRPNSRLSCQIKVSNEL 114 (126)
T ss_dssp EEEEETTSBHHHHHHTTTCTTCCCTTSSSSCCSTTEEEECGGGHHHHCCCCHHHHHHHTTSSSCCTTEEEGGGCBCCGGG
T ss_pred EEEECCCCcHHHHHHHcCCCCCccCCCCCCCCCCCEEEECCCcccccCCCCHHHhhhcCchhhccCCeEEeeeCEECcCC
Confidence 45556665 9999999999 999998 8999999999999986532 123576 3678889999999999999
Q ss_pred --eEEEecCCC
Q 045945 111 --CVIYTHKES 119 (122)
Q Consensus 111 --l~I~l~~~~ 119 (122)
++|++++.+
T Consensus 115 dgl~V~lp~~~ 125 (126)
T 3hui_A 115 DGLIVTTPERQ 125 (126)
T ss_dssp TTEEEECCSCC
T ss_pred CcEEEEecCcC
Confidence 999999875
No 22
>2bt6_A Adrenodoxin 1; ruthenium(II) bipyridyl complex, intramolecular electron TRA electron transport, metal-binding; HET: RUA; 1.50A {Bos taurus} SCOP: d.15.4.1 PDB: 1ayf_A 3n9y_C* 2jqr_B* 3na0_C*
Probab=99.60 E-value=1.3e-16 Score=109.28 Aligned_cols=74 Identities=16% Similarity=0.216 Sum_probs=59.7
Q ss_pred HcCCCCch--HHHHHHcCCCcC--CCCC-CcccCCCeeeeeeccccCCC------CCCCCh-hcccCCeEEeeceEECC-
Q 045945 43 AFGLKSSS--FKVSAMAVYKLP--YSCR-AGACSTCAGLMVSGSVDQSD------GSFLDD-NQMEKGYVLTCIAYPKS- 109 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~--~~Cr-~G~CGtCkv~vl~G~v~~~~------~~~Ls~-~e~~~g~~LaCqs~~~s- 109 (122)
.+.+++|+ |++++++||+++ ++|+ .|.||+|+++|++|.++... ...|+. .++++|+||+||+++.+
T Consensus 20 ~v~~~~g~tLL~aa~~~gi~i~~~~~Cgg~G~CgtC~v~v~~g~~~~l~~~~~~E~~~L~~~~~~~~g~rLaCq~~~~~d 99 (108)
T 2bt6_A 20 TTKGKIGDSLLDVVVQNNLDIDGFGACEGTLACSTCHLIFEQHIFEKLEAITDEENDMLDLAYGLTDRSRLGCQICLTKA 99 (108)
T ss_dssp EEEEETTCBHHHHHHHTTCCCTTTTTTSSSSSBSTTEEECCHHHHTTSCCCCHHHHHHHTTCTTCCTTEEEGGGCBCCGG
T ss_pred EEEECCCChHHHHHHHcCCCCCcccCCCCCcCcCCCEEEECccccccCCCCCHHHHHHHhCcccCCCCcEeeEEEEecCC
Confidence 44556665 999999999999 9998 59999999999999765432 134654 56788999999999999
Q ss_pred --CeEEEec
Q 045945 110 --DCVIYTH 116 (122)
Q Consensus 110 --dl~I~l~ 116 (122)
+++|+++
T Consensus 100 ~d~~~V~~p 108 (108)
T 2bt6_A 100 MDNMTVRVP 108 (108)
T ss_dssp GTTEEEECC
T ss_pred CCCEEEEcC
Confidence 4888875
No 23
>1l5p_A Ferredoxin; [2Fe-2S] cluster, electron transfer, iron-sulfur protein, metalloprotein, oxidoreductase; 2.20A {Trichomonas vaginalis} SCOP: d.15.4.1
Probab=99.57 E-value=9.5e-16 Score=102.62 Aligned_cols=67 Identities=22% Similarity=0.382 Sum_probs=56.3
Q ss_pred HcCCCCch--HHHHHHcCCC-cCCCCC-CcccCCCeeeeeeccccCCC---CCCCChhcccCCeEEeeceEECCCe
Q 045945 43 AFGLKSSS--FKVSAMAVYK-LPYSCR-AGACSTCAGLMVSGSVDQSD---GSFLDDNQMEKGYVLTCIAYPKSDC 111 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~-i~~~Cr-~G~CGtCkv~vl~G~v~~~~---~~~Ls~~e~~~g~~LaCqs~~~sdl 111 (122)
.+.+++++ |++++++|++ ++++|+ .|.||+|+++|.+|++.... ...|+ ++++|++|+||++|.+|+
T Consensus 13 ~~~~~~g~tll~a~~~~gi~gi~~~C~G~G~Cg~C~v~v~~g~~~~~~~~e~~~L~--~~~~g~rLaCq~~~~~d~ 86 (93)
T 1l5p_A 13 QLKFEDDQTLFTVLTEAGLMSADDTCQGNKACGKCICKHVSGKVAAAEDDEKEFLE--DQPANARLACAITLSGEN 86 (93)
T ss_dssp EEECCTTEEHHHHHHTTTSSCCTTSCSSSSSSCCCEEEEEESCCCCCCHHHHHHHT--TSCTTEEEGGGCEECGGG
T ss_pred EEEECCCChHHHHHHHcCCCcCCcCCCCcCCcCCCEEEECCCcCCCCCHHHHHHhc--CCCCCcEEeeECEECCCC
Confidence 45667766 9999999999 999999 99999999999999886443 23465 678899999999999874
No 24
>3n9z_C Adrenodoxin; cytochrome P450, 22-hydroxycholesterol, cholesterol SIDE CHA cleavage, structural genomics; HET: HEM HC9; 2.17A {Homo sapiens} SCOP: d.15.4.1 PDB: 3na1_C* 3p1m_A* 1l6u_A 1l6v_A 1e6e_B* 1cje_A
Probab=99.38 E-value=1.3e-14 Score=102.48 Aligned_cols=78 Identities=17% Similarity=0.200 Sum_probs=18.7
Q ss_pred HHcCCCCch--HHHHHHcCCCcC--CCCC-CcccCCCeeeeeeccccCCC------CCCCCh-hcccCCeEEeeceEECC
Q 045945 42 KAFGLKSSS--FKVSAMAVYKLP--YSCR-AGACSTCAGLMVSGSVDQSD------GSFLDD-NQMEKGYVLTCIAYPKS 109 (122)
Q Consensus 42 ~~~~~~~~~--L~a~~~~Gi~i~--~~Cr-~G~CGtCkv~vl~G~v~~~~------~~~Ls~-~e~~~g~~LaCqs~~~s 109 (122)
+.+.+++|+ |+++.++|++++ +.|+ .|.||+|+++|.+|...... ...|+. .++.+++||+||.++.+
T Consensus 18 ~~v~~~~G~tLl~aa~~~gi~i~g~~~CgG~g~CgtC~v~v~~~~~~~l~~~~~~E~~~L~~~~~~~~~~RLaCQ~~v~~ 97 (123)
T 3n9z_C 18 LTTKGKVGDSLLDVVVENNLDIDGFGACEGTLACSTCHLIFEDHIYEKLDAITDEENDMLDLAYGLTDRSRLGCQICLTK 97 (123)
T ss_dssp -------------------------CTTCSSSSCSTTBC--------------CHHHHHHCC--------CBCC------
T ss_pred EEEEECCCCcHHHHHHHcCCCCCcCCCCCCCCEeCCCeeEEeccccccCCCCChHHHhhhcccccccCCeEEeeEeEEcc
Confidence 456677776 899999999999 9998 89999999999975433221 123443 45677999999999998
Q ss_pred ---CeEEEecCCC
Q 045945 110 ---DCVIYTHKES 119 (122)
Q Consensus 110 ---dl~I~l~~~~ 119 (122)
|++|++|+..
T Consensus 98 ~ld~l~V~ip~~~ 110 (123)
T 3n9z_C 98 SMDNMTVRVPETV 110 (123)
T ss_dssp -------------
T ss_pred CCCCEEEEECccc
Confidence 7999998764
No 25
>1ep3_B Dihydroorotate dehydrogenase B (PYRK subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: b.43.4.2 c.25.1.3 PDB: 1ep1_B* 1ep2_B*
Probab=97.95 E-value=4.9e-06 Score=63.19 Aligned_cols=48 Identities=10% Similarity=0.135 Sum_probs=38.1
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCCCCchHHHHHHcCCCcCCCCCCcccCCCeeeee
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGLKSSSFKVSAMAVYKLPYSCRAGACSTCAGLMV 78 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~~~~~L~a~~~~Gi~i~~~Cr~G~CGtCkv~vl 78 (122)
.+.++|+|||.+||+ ++ +++.|++ .++. +.-...|+.|.||.|.+...
T Consensus 190 ~~~~vyvCGp~~m~~~v~~-l~~~gv~-~~vs------~e~~m~CG~G~C~~C~~~~~ 239 (262)
T 1ep3_B 190 EVDALYTCGAPAMLKAVAK-KYDQLER-LYIS------MESRMACGIGACYACVEHDK 239 (262)
T ss_dssp CCSEEEEESCHHHHHHHHH-HTTTCSS-EEEE------CCCCCSSSSSSSCTTEEEET
T ss_pred CCCEEEEECCHHHHHHHHH-HHhCCCC-EEEE------ecccccCcccccccCCcccc
Confidence 368999999999999 66 7888887 2232 33567899999999999864
No 26
>3i9v_3 NADH-quinone oxidoreductase subunit 3; electron transport, respiratory chain, cell flavoprotein, FMN, iron, iron-sulfur, membrane; HET: FMN; 3.10A {Thermus thermophilus} PDB: 2ybb_3* 2fug_3* 3iam_3* 3ias_3* 3m9s_3*
Probab=97.71 E-value=1.9e-05 Score=69.38 Aligned_cols=75 Identities=16% Similarity=0.298 Sum_probs=50.6
Q ss_pred HcCCCCch--HHHHHHcCCCcCCCC------CCcccCCCeeeeeeccccCCCCCCCChhc-----ccCCeEEeeceEECC
Q 045945 43 AFGLKSSS--FKVSAMAVYKLPYSC------RAGACSTCAGLMVSGSVDQSDGSFLDDNQ-----MEKGYVLTCIAYPKS 109 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~Gi~i~~~C------r~G~CGtCkv~vl~G~v~~~~~~~Ls~~e-----~~~g~~LaCqs~~~s 109 (122)
.+.+++|. |+++.++|++||+.| ..|.|+.|.|+|..+.........++++. ...+.+++|++.+..
T Consensus 10 ~~~v~~g~til~a~~~~gi~ip~~C~~~~~~~~G~C~~C~V~v~~~~~~~~g~~~~~~~G~~~~~~~~~~~~aC~t~v~~ 89 (783)
T 3i9v_3 10 IVEVPPGTSVMDAVFHAGYDVPLFCSEKHLSPIGACRMCLVRIGLPKKGPDGKPLLNEKGEPEIQWQPKLAASCVTAVAD 89 (783)
T ss_dssp EEEECTTCBHHHHHHHTTCCCCCSSCCTTSCCCCCSCCSEEEEECC-----------------CCBCSSCEETTTCBCCS
T ss_pred EEEeCCCChHHHHHHHhCCCccccCCCCCCCCCcccCCcEEEecccccccccccccccccccccccCCCcccccCCCCCC
Confidence 45677777 999999999999999 78999999999953222111111221111 123579999999999
Q ss_pred CeEEEecC
Q 045945 110 DCVIYTHK 117 (122)
Q Consensus 110 dl~I~l~~ 117 (122)
+++|+...
T Consensus 90 gm~v~t~~ 97 (783)
T 3i9v_3 90 GMVVDTLS 97 (783)
T ss_dssp SEEEESSS
T ss_pred CCEEEECC
Confidence 99998753
No 27
>1kf6_B Fumarate reductase iron-sulfur protein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.1.2.1 d.15.4.2 PDB: 1kfy_B* 1l0v_B* 2b76_B* 3cir_B* 3p4p_B* 3p4q_B* 3p4r_B* 3p4s_B*
Probab=97.41 E-value=4.8e-05 Score=57.58 Aligned_cols=54 Identities=13% Similarity=0.368 Sum_probs=39.3
Q ss_pred HcCCCCch--HHHHHHcC------CCcCCCCCCcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCC---e
Q 045945 43 AFGLKSSS--FKVSAMAV------YKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSD---C 111 (122)
Q Consensus 43 ~~~~~~~~--L~a~~~~G------i~i~~~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sd---l 111 (122)
.+.++++. |+++..+| +...++|+.|.||+|.++| +|. .+++|++.+... +
T Consensus 27 ~~~~~~~~tll~al~~~~~~~~p~l~~~~~c~~G~Cg~C~v~v-~G~-----------------~~~aC~~~~~~~~~~~ 88 (243)
T 1kf6_B 27 EVPYDATTSLLDALGYIKDNLAPDLSYRWSCRMAICGSCGMMV-NNV-----------------PKLACKTFLRDYTDGM 88 (243)
T ss_dssp EEEECTTCBHHHHHHHHHHHTCTTCCCCCCCSSSSSCCCEEEE-TTE-----------------EEEGGGCBGGGCTTCE
T ss_pred EEecCCCChHHHHHHHcCcccCCCcccccCCCCCcCCCCEeEE-CCE-----------------EEeeeeeEHhhCCCcE
Confidence 34455555 78888777 4477899999999999995 564 277888877665 6
Q ss_pred EEE
Q 045945 112 VIY 114 (122)
Q Consensus 112 ~I~ 114 (122)
+|+
T Consensus 89 ~i~ 91 (243)
T 1kf6_B 89 KVE 91 (243)
T ss_dssp EEE
T ss_pred EEE
Confidence 664
No 28
>2bs2_B Quinol-fumarate reductase iron-sulfur subunit B; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.1.2.1 d.15.4.2 PDB: 2bs3_B* 1e7p_B* 1qlb_B* 2bs4_B*
Probab=97.40 E-value=5.6e-05 Score=57.23 Aligned_cols=37 Identities=30% Similarity=0.612 Sum_probs=27.6
Q ss_pred CCCCch--HHHHHHcC------CCcCCCCCCcccCCCeeeeeeccc
Q 045945 45 GLKSSS--FKVSAMAV------YKLPYSCRAGACSTCAGLMVSGSV 82 (122)
Q Consensus 45 ~~~~~~--L~a~~~~G------i~i~~~Cr~G~CGtCkv~vl~G~v 82 (122)
.++++. |+++...| +...++|+.|+||+|.++| +|..
T Consensus 29 ~~~~~~tlL~~l~~~~~~~~~~l~~~~~c~~g~Cg~C~v~i-~G~~ 73 (241)
T 2bs2_B 29 EEAPSMTIFIVLNMIRETYDPDLNFDFVCRAGICGSCGMMI-NGRP 73 (241)
T ss_dssp ECCTTCBHHHHHHHHHHHTCTTCCCCCSSSSSSSCTTEEEE-TTEE
T ss_pred eCCCCChHHHHHHHhchhcCCCCccCCCCCCCCCCCCEeEE-CCCe
Confidence 345554 77776543 4577899999999999999 7754
No 29
>1qfj_A Protein (flavin reductase); riboflavin, ferredoxin reductase superfami oxidoreductase; 2.20A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1
Probab=97.25 E-value=0.00011 Score=54.21 Aligned_cols=35 Identities=6% Similarity=-0.062 Sum_probs=29.5
Q ss_pred CCCCeeEEcCChhhhh--HhHH-HHcCCCCchHHHHHH
Q 045945 22 TRMKFPLVKSPGSLVS--RSVS-KAFGLKSSSFKVSAM 56 (122)
Q Consensus 22 ~~~~~~YvCGP~~fm~--~~~~-~~~~~~~~~L~a~~~ 56 (122)
..+.++|+|||.+||+ ++.+ ++.|++.+++|.+.+
T Consensus 192 ~~~~~vyvCGp~~m~~~v~~~l~~~~g~~~~~i~~E~F 229 (232)
T 1qfj_A 192 LAEHDIYIAGRFEMAKIARDLFCSERNAREDRLFGDAF 229 (232)
T ss_dssp CTTCEEEEESCHHHHHHHHHHHHHHSCCCGGGEECTHH
T ss_pred ccccEEEEECCHHHHHHHHHHHHHHcCCCHHHEEEeee
Confidence 3568999999999999 7777 899999998876654
No 30
>1t3q_A Quinoline 2-oxidoreductase small subunit; QOR, molybdenum, MCD; HET: FAD MCN; 1.80A {Pseudomonas putida} SCOP: a.56.1.1 d.15.4.2
Probab=97.15 E-value=0.00021 Score=52.14 Aligned_cols=35 Identities=17% Similarity=0.374 Sum_probs=29.3
Q ss_pred CCCCch--HHHHHHc-CCC-cCCCCCCcccCCCeeeeeec
Q 045945 45 GLKSSS--FKVSAMA-VYK-LPYSCRAGACSTCAGLMVSG 80 (122)
Q Consensus 45 ~~~~~~--L~a~~~~-Gi~-i~~~Cr~G~CGtCkv~vl~G 80 (122)
.++++. |+++..+ |+. ++++|+.|.||+|.+.| +|
T Consensus 24 ~v~~~~tlL~~Lr~~~gl~g~~~~C~~G~CGaC~V~v-dG 62 (168)
T 1t3q_A 24 YVEPRMHLADALREVVGLTGTKIGCEQGVCGSCTILI-DG 62 (168)
T ss_dssp EECTTSBHHHHHHHTTCCTTSCCSCSSSSSCTTEEEE-TT
T ss_pred ecCCCCcHHHHHHhcCCCCccccCCCCCCCCCcEEEE-CC
Confidence 355555 8888886 997 99999999999999998 66
No 31
>3c8y_A Iron hydrogenase 1; dithiomethylether, H-cluster, iron-sulfur binding, oxidoreductase; HET: HCN; 1.39A {Clostridium pasteurianum} SCOP: c.96.1.1 d.15.4.2 d.58.1.5 PDB: 1c4c_A* 1c4a_A* 1feh_A*
Probab=97.02 E-value=0.00036 Score=59.39 Aligned_cols=56 Identities=18% Similarity=0.358 Sum_probs=45.7
Q ss_pred cCCCCch--HHHHHHcCCCcCCCCC-------CcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECCCeEEE
Q 045945 44 FGLKSSS--FKVSAMAVYKLPYSCR-------AGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKSDCVIY 114 (122)
Q Consensus 44 ~~~~~~~--L~a~~~~Gi~i~~~Cr-------~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~sdl~I~ 114 (122)
+.++++. |+++..+|+.+|+.|. .|.||.|.+.| +|. . .+++|++.+.++++|.
T Consensus 11 v~v~~g~tiL~a~~~~gi~ip~lC~~~~~~~~~G~Cg~C~V~v-~g~---------------~-~~~aC~t~v~~gm~V~ 73 (574)
T 3c8y_A 11 FNTDEDTTILKFARDNNIDISALCFLNNCNNDINKCEICTVEV-EGT---------------G-LVTACDTLIEDGMIIN 73 (574)
T ss_dssp EEECCCCBHHHHHHHTTCCCCCSSCBTTBCCSSSCCCTTEEEE-TTT---------------E-EEEGGGCBCCTTCEEE
T ss_pred EEeCCCCHHHHHHHHcCCCCCcccCCCCCCCCcccCCCCEEEe-CCC---------------c-ccccCCCCcccceeEE
Confidence 4466666 8999999999999998 89999999987 221 1 6899999999999887
Q ss_pred ec
Q 045945 115 TH 116 (122)
Q Consensus 115 l~ 116 (122)
..
T Consensus 74 T~ 75 (574)
T 3c8y_A 74 TN 75 (574)
T ss_dssp SS
T ss_pred ec
Confidence 54
No 32
>2eix_A NADH-cytochrome B5 reductase; flavoprotein, FAD-binding domain, NADH-binding, oxidoreducta; HET: FAD; 1.56A {Physarum polycephalum}
Probab=96.97 E-value=0.00028 Score=52.35 Aligned_cols=31 Identities=6% Similarity=0.086 Sum_probs=26.4
Q ss_pred CCCCeeEEcCChhhhh--HhHHHHcCCCCchHH
Q 045945 22 TRMKFPLVKSPGSLVS--RSVSKAFGLKSSSFK 52 (122)
Q Consensus 22 ~~~~~~YvCGP~~fm~--~~~~~~~~~~~~~L~ 52 (122)
..+.++|+|||.+||+ ++.+++.|+++++++
T Consensus 209 ~~~~~vy~CGp~~m~~~v~~~l~~~G~~~~~i~ 241 (243)
T 2eix_A 209 SSDIKVMMCGPPMMNKAMQGHLETLGYTPEQWF 241 (243)
T ss_dssp TSSEEEEEESSHHHHHHHHHHHHHHTCCGGGEE
T ss_pred CCCeEEEEECCHHHHHHHHHHHHHcCCCHHHEE
Confidence 3567899999999999 888889999988754
No 33
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=96.96 E-value=0.00047 Score=49.06 Aligned_cols=25 Identities=16% Similarity=0.222 Sum_probs=22.2
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCCC
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGLK 47 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~~ 47 (122)
...++|+|||.+||+ ++++++.|++
T Consensus 112 ~~~~vy~CGP~~mm~~v~~~l~~~Gv~ 138 (158)
T 3lrx_A 112 DWDLVFMVGPVGDQKQVFEVVKEYGVP 138 (158)
T ss_dssp CCSEEEEESCHHHHHHHHHHHGGGTCC
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCC
Confidence 356899999999999 8888999998
No 34
>2wdq_B Succinate dehydrogenase iron-sulfur subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_B* 2acz_B* 1nek_B* 2wdr_B* 2wdv_B* 2ws3_B* 2wu2_B* 2wu5_B* 2wp9_B*
Probab=96.95 E-value=0.00031 Score=52.96 Aligned_cols=37 Identities=19% Similarity=0.319 Sum_probs=27.7
Q ss_pred cCCCC--ch--HHHHHHcC-----CCcCCCCCCcccCCCeeeeeecc
Q 045945 44 FGLKS--SS--FKVSAMAV-----YKLPYSCRAGACSTCAGLMVSGS 81 (122)
Q Consensus 44 ~~~~~--~~--L~a~~~~G-----i~i~~~Cr~G~CGtCkv~vl~G~ 81 (122)
+.+++ +. |+++...| +...++|+.|.||+|.+.| +|.
T Consensus 25 v~~~~~~~~tll~~l~~~~~~~~~l~~~~~C~~g~Cg~C~v~v-~G~ 70 (238)
T 2wdq_B 25 LEADEGRDMMLLDALIQLKEKDPSLSFRRSCREGVCGSDGLNM-NGK 70 (238)
T ss_dssp EECCTTCCCBHHHHHHHHHHHCTTCCCCCSSSSSSSCTTEEEE-TTE
T ss_pred eecCCCCCChHHHHHHHhcccCCCccccccCCCCCCCCCEEEE-CCE
Confidence 34555 44 67776665 6788899999999999997 554
No 35
>2gpj_A Siderophore-interacting protein; structural genomics, joint for structural genomics, JCSG; HET: FAD; 2.20A {Shewanella putrefaciens}
Probab=96.95 E-value=0.00024 Score=53.76 Aligned_cols=35 Identities=20% Similarity=0.065 Sum_probs=28.6
Q ss_pred CCCCCeeEEcCChhhhh--HhHHH-HcCCCCchHHHHH
Q 045945 21 PTRMKFPLVKSPGSLVS--RSVSK-AFGLKSSSFKVSA 55 (122)
Q Consensus 21 ~~~~~~~YvCGP~~fm~--~~~~~-~~~~~~~~L~a~~ 55 (122)
|..+.++|+|||.+||+ ++.++ +.|++.+++|.+.
T Consensus 188 ~~~~~~vy~CGP~~m~~av~~~l~~~~G~~~~~i~~e~ 225 (252)
T 2gpj_A 188 LAGEPAVWIACEFNSMRALRRHFKQAHALPKSHFYTSS 225 (252)
T ss_dssp CSSCEEEEEEEEHHHHHHHHHHHHHHCCCCGGGEEEEE
T ss_pred CCCCcEEEEEcCHHHHHHHHHHHHHhcCCCHHHeEEEE
Confidence 34567899999999999 77776 7999999877653
No 36
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=96.94 E-value=0.00047 Score=48.30 Aligned_cols=27 Identities=15% Similarity=0.163 Sum_probs=22.9
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCCCCc
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGLKSS 49 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~~~~ 49 (122)
...++|+|||.+||+ .+++++.|++.=
T Consensus 107 ~~~~vy~CGP~~Mm~av~~~l~~~~~~~~ 135 (142)
T 3lyu_A 107 DWDLVFMVGPVGDQKQVFEVVKEYGVPML 135 (142)
T ss_dssp CCSEEEEESCHHHHHHHHHHHHHHTCCBC
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCchh
Confidence 446899999999999 888899998853
No 37
>4eh1_A Flavohemoprotein; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: FAD; 2.20A {Vibrio cholerae o1 biovar el tor}
Probab=96.92 E-value=0.00032 Score=51.89 Aligned_cols=36 Identities=11% Similarity=0.102 Sum_probs=30.7
Q ss_pred CCCCCeeEEcCChhhhh--HhHHHHcCCCCchHHHHHH
Q 045945 21 PTRMKFPLVKSPGSLVS--RSVSKAFGLKSSSFKVSAM 56 (122)
Q Consensus 21 ~~~~~~~YvCGP~~fm~--~~~~~~~~~~~~~L~a~~~ 56 (122)
+..+.++|+|||.+||+ ++.+++.|++.+++|.+.+
T Consensus 198 ~~~~~~vyvCGp~~m~~~v~~~l~~~g~~~~~i~~E~F 235 (243)
T 4eh1_A 198 PIEDGDFYLCGPIGFMQYVVKQLLALGVDKARIHYEVF 235 (243)
T ss_dssp CTTTCEEEEEECHHHHHHHHHHHHHHTCCGGGEEEEEC
T ss_pred cCCCcEEEEECCHHHHHHHHHHHHHcCCCHHHEEEecc
Confidence 44678999999999999 8888899999998776654
No 38
>1tvc_A Methane monooxygenase component C, methane monooxygenase; FAD-binding, NADH-binding, oxidoreductase; HET: FDA; NMR {Methylococcus capsulatus} SCOP: b.43.4.2 c.25.1.2
Probab=96.90 E-value=0.00015 Score=54.31 Aligned_cols=34 Identities=6% Similarity=0.090 Sum_probs=29.1
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCCCCchHHHHHH
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGLKSSSFKVSAM 56 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~~~~~L~a~~~ 56 (122)
.+.++|+|||.+||+ ++.+++.|++.+++|.+.+
T Consensus 209 ~~~~vyvCGp~~m~~~v~~~l~~~G~~~~~i~~e~F 244 (250)
T 1tvc_A 209 ANPDIYLCGPPGMIDAACELVRSRGIPGEQVFFEKF 244 (250)
T ss_dssp SSSEEEEESSHHHHHHHHHHHHHHCCCCSEEEECCC
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHcCCCHHHEEEEec
Confidence 467999999999999 8888899999988776544
No 39
>2r6h_A NADH:ubiquinone oxidoreductase, Na translocating, subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: FAD; 2.95A {Porphyromonas gingivalis}
Probab=96.79 E-value=0.00013 Score=55.50 Aligned_cols=32 Identities=9% Similarity=0.187 Sum_probs=27.3
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCCCCchHHHH
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGLKSSSFKVS 54 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~~~~~L~a~ 54 (122)
.+.++|+|||.+||+ ++++++.|++.++++.+
T Consensus 254 ~~~~vyvCGp~~m~~~v~~~l~~~G~~~~~i~~e 287 (290)
T 2r6h_A 254 EDIEYYMCGPGPMANAVKGMLENLGVPRNMLFFD 287 (290)
T ss_dssp GGEEEEEECCHHHHHHHHHHHHHHTCCGGGEEEE
T ss_pred CCcEEEEECCHHHHHHHHHHHHHcCCCHHHEEec
Confidence 457899999999999 88888999998887654
No 40
>1cqx_A Flavohemoprotein; globin fold, six-stranded antiparallel beta sheet, helix-FLA five-stranded parallel beta sheet, lipid binding protein; HET: HEM FAD DGG; 1.75A {Cupriavidus necator} SCOP: a.1.1.2 b.43.4.2 c.25.1.5 PDB: 3ozu_A* 3ozv_B* 3ozw_A*
Probab=96.74 E-value=0.00026 Score=56.66 Aligned_cols=33 Identities=9% Similarity=0.144 Sum_probs=29.3
Q ss_pred CCeeEEcCChhhhh--HhHHHHcCCCCchHHHHHH
Q 045945 24 MKFPLVKSPGSLVS--RSVSKAFGLKSSSFKVSAM 56 (122)
Q Consensus 24 ~~~~YvCGP~~fm~--~~~~~~~~~~~~~L~a~~~ 56 (122)
+.++|+|||.+||+ ++.+++.|++++++|.+.+
T Consensus 362 ~~~vyvCGp~~m~~~v~~~L~~~Gv~~~~i~~E~F 396 (403)
T 1cqx_A 362 DADYYICGPIPFMRMQHDALKNLGIHEARIHYEVF 396 (403)
T ss_dssp TCEEEEESSHHHHHHHHHHHHHTTCCGGGEEECCC
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCCHHHeEEeee
Confidence 78999999999999 8888999999998877655
No 41
>1fdr_A Flavodoxin reductase; ferredoxin reductase, flavin, oxidoreductase, flavoprotein; HET: FAD; 1.70A {Escherichia coli} SCOP: b.43.4.2 c.25.1.1 PDB: 2xnj_A* 3fpk_A*
Probab=96.70 E-value=0.0006 Score=50.65 Aligned_cols=31 Identities=3% Similarity=0.037 Sum_probs=26.1
Q ss_pred CCCCeeEEcCChhhhh--HhHH-HHcCCCCchHH
Q 045945 22 TRMKFPLVKSPGSLVS--RSVS-KAFGLKSSSFK 52 (122)
Q Consensus 22 ~~~~~~YvCGP~~fm~--~~~~-~~~~~~~~~L~ 52 (122)
..+.++|+|||.+||+ ++.+ ++.|+++++++
T Consensus 204 ~~~~~vy~CGp~~m~~~v~~~l~~~~G~~~~~i~ 237 (248)
T 1fdr_A 204 KETSHVMLCGNPQMVRDTQQLLKETRQMTKHLRR 237 (248)
T ss_dssp TTTEEEEEEECHHHHHHHHHHHHHHHCCCBCBTT
T ss_pred ccCCEEEEeCCHHHHHHHHHHHHHHcCCChHHcC
Confidence 4578999999999999 7788 88999987643
No 42
>1gvh_A Flavohemoprotein; oxidoreductase, NADP, heme, flavoprotein, FAD, iron transpor; HET: FAD HEM; 2.19A {Escherichia coli} SCOP: a.1.1.2 b.43.4.2 c.25.1.5
Probab=96.61 E-value=0.00084 Score=53.52 Aligned_cols=33 Identities=9% Similarity=0.114 Sum_probs=29.3
Q ss_pred CCeeEEcCChhhhh--HhHHHHcCCCCchHHHHHH
Q 045945 24 MKFPLVKSPGSLVS--RSVSKAFGLKSSSFKVSAM 56 (122)
Q Consensus 24 ~~~~YvCGP~~fm~--~~~~~~~~~~~~~L~a~~~ 56 (122)
+.++|+|||.+||+ ++.+++.|++++++|.+.+
T Consensus 356 ~~~vyvCGp~~m~~~v~~~L~~~Gv~~~~i~~E~F 390 (396)
T 1gvh_A 356 TMQFYLCGPVGFMQFTAKQLVDLGVKQENIHYECF 390 (396)
T ss_dssp TCEEEEESCHHHHHHHHHHHHHTTCCGGGEEEECS
T ss_pred CCEEEEeCCHHHHHHHHHHHHHcCCCHHHEEEecc
Confidence 78999999999999 8888999999998876655
No 43
>2h88_B Succinate dehydrogenase IP subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_B* 1yq3_B* 2fbw_B* 2h89_B* 2wqy_B* 3aef_B* 3abv_B* 3ae1_B* 3ae3_B* 3ae2_B* 3ae5_B* 3ae6_B* 3ae7_B* 3ae8_B* 3ae9_B* 3aea_B* 3aeb_B* 3aec_B* 3aed_B* 3aee_B* ...
Probab=96.60 E-value=0.00098 Score=50.90 Aligned_cols=41 Identities=24% Similarity=0.494 Sum_probs=30.4
Q ss_pred HHHHHHcC------CCcCCCCCCcccCCCeeeeeeccccCCCCCCCChhcccCCeEEeeceEECC
Q 045945 51 FKVSAMAV------YKLPYSCRAGACSTCAGLMVSGSVDQSDGSFLDDNQMEKGYVLTCIAYPKS 109 (122)
Q Consensus 51 L~a~~~~G------i~i~~~Cr~G~CGtCkv~vl~G~v~~~~~~~Ls~~e~~~g~~LaCqs~~~s 109 (122)
|+++...| +...++|+.|.||+|.+.| +|. .+|+|++.+..
T Consensus 45 Ld~l~~~~~~~~p~l~~~~~c~~g~Cg~C~v~i-~G~-----------------~~~aC~~~~~~ 91 (252)
T 2h88_B 45 LDALIKIKNELDSTLTFRRSCREGICGSCAMNI-AGG-----------------NTLACTKKIDP 91 (252)
T ss_dssp HHHHHHHHHHTCTTCCCCCSCSSSSSCTTEEEE-TTE-----------------EEEGGGSBCCC
T ss_pred HHHHHHhCcccCCCccccCCCCCCCCCCCEEEE-CCc-----------------EEccccCCHhH
Confidence 77777665 3466799999999999995 554 36777777654
No 44
>4g1v_A Flavohemoglobin; three domains: globin fold, antiparallel beta-barrel, alpha/ fold, RESP., FAD, oxidoreductase; HET: HEM FAD; 2.10A {Saccharomyces cerevisiae} PDB: 4g1b_A*
Probab=96.55 E-value=0.00087 Score=53.65 Aligned_cols=33 Identities=3% Similarity=-0.080 Sum_probs=29.5
Q ss_pred CCeeEEcCChhhhh--HhHHHHcCCCCchHHHHHH
Q 045945 24 MKFPLVKSPGSLVS--RSVSKAFGLKSSSFKVSAM 56 (122)
Q Consensus 24 ~~~~YvCGP~~fm~--~~~~~~~~~~~~~L~a~~~ 56 (122)
+.++|+|||.+||+ ++.+++.|++++++|.+.+
T Consensus 356 ~~~vyvCGp~~m~~~v~~~L~~~Gv~~~~i~~E~F 390 (399)
T 4g1v_A 356 HADVYTCGSLAFMQAMIGHLKELEHRDDMIHYEPF 390 (399)
T ss_dssp SCEEEEEECHHHHHHHHHHHHHTTCCGGGEEEEES
T ss_pred CCEEEEECCHHHHHHHHHHHHHcCCCHHHeeeecc
Confidence 78999999999999 8888999999998876654
No 45
>4fk8_A Ferredoxin--NADP reductase; ssgcid, NIH, niaid, structural genomics, national institute allergy and infectious diseases; HET: FAD; 2.10A {Burkholderia thailandensis} PDB: 4f7d_A*
Probab=96.54 E-value=0.00099 Score=50.28 Aligned_cols=31 Identities=10% Similarity=0.100 Sum_probs=26.9
Q ss_pred CCCCeeEEcCChhhhh--HhHHHHcCCCCchHH
Q 045945 22 TRMKFPLVKSPGSLVS--RSVSKAFGLKSSSFK 52 (122)
Q Consensus 22 ~~~~~~YvCGP~~fm~--~~~~~~~~~~~~~L~ 52 (122)
..+.++|+|||.+||+ ++.+++.|+++++++
T Consensus 226 ~~~~~v~vCGp~~m~~~v~~~l~~~gv~~~~i~ 258 (271)
T 4fk8_A 226 PEQDRVMLCGSTAMLKDTTELLKKAGLVEGKNS 258 (271)
T ss_dssp TTTEEEEEEECHHHHHHHHHHHHHTTCCBCBTT
T ss_pred CCCCEEEEECCHHHHHHHHHHHHHcCCchhhcC
Confidence 4578999999999999 888899999988654
No 46
>1umk_A B5R, NADH-cytochrome B5 reductase; flavoprotein, beta barrel, FAD-binding domain, NADH-binding domain, oxidoreductase; HET: FAD; 1.75A {Homo sapiens} SCOP: b.43.4.2 c.25.1.1 PDB: 1ndh_A* 1i7p_A* 1ib0_A* 1qx4_A*
Probab=96.52 E-value=0.00076 Score=50.93 Aligned_cols=30 Identities=10% Similarity=0.101 Sum_probs=25.8
Q ss_pred CCCeeEEcCChhhhh---HhHHHHcCCCCchHH
Q 045945 23 RMKFPLVKSPGSLVS---RSVSKAFGLKSSSFK 52 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~---~~~~~~~~~~~~~L~ 52 (122)
.+.++|+|||.+||+ ++.+++.|+++++++
T Consensus 241 ~~~~vyvCGp~~m~~~~v~~~L~~~G~~~~~I~ 273 (275)
T 1umk_A 241 EEPLVLMCGPPPMIQYACLPNLDHVGHPTERCF 273 (275)
T ss_dssp GCCEEEEESCHHHHHHTTHHHHHHHTCCGGGEE
T ss_pred CCeEEEEECCHHHHHHHHHHHHHHcCCCHHHEE
Confidence 578999999999998 678889999988754
No 47
>2bgi_A Ferredoxin-NADP(H) reductase; ferredoxin(flavodoxin)-NADP(H) reductase, flavoproteins, electron transfer, oxidoreductase; HET: FAD HTG; 1.68A {Rhodobacter capsulatus} PDB: 2bgj_A* 2vnh_A* 2vni_A* 2vnj_A* 2vnk_A*
Probab=96.48 E-value=0.00097 Score=50.63 Aligned_cols=29 Identities=14% Similarity=0.187 Sum_probs=25.2
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCCCCchH
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGLKSSSF 51 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~~~~~L 51 (122)
.+.++|+|||.+||+ ++.+++.|++++++
T Consensus 225 ~~~~vyvCGp~~m~~~v~~~l~~~G~~~~~i 255 (272)
T 2bgi_A 225 ETDRAMVCGSLAFNVDVMKVLESYGLREGAN 255 (272)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHTTTCCBCBT
T ss_pred CCcEEEEECCHHHHHHHHHHHHHcCCChHHc
Confidence 568999999999999 88888999998653
No 48
>2qdx_A Ferredoxin reductase; oxidoreductase; HET: FAD; 1.55A {Pseudomonas aeruginosa} PDB: 3crz_A* 1a8p_A*
Probab=96.38 E-value=0.0017 Score=48.66 Aligned_cols=27 Identities=26% Similarity=0.377 Sum_probs=24.2
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCCCCc
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGLKSS 49 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~~~~ 49 (122)
.+.++|+|||.+||+ ++.+++.|++++
T Consensus 211 ~~~~vyvCGp~~m~~~v~~~l~~~G~~~~ 239 (257)
T 2qdx_A 211 QDDRAMICGSPSMLEETSAVLDSFGLKIS 239 (257)
T ss_dssp TTEEEEEEECHHHHHHHHHHHHHTTCCBC
T ss_pred CCCEEEEECCHHHHHHHHHHHHHcCCChH
Confidence 568999999999999 888889999987
No 49
>2cnd_A NADH-dependent nitrate reductase; nitrate assimilating enzyme, oxidoreductase, nitrogenous acceptor; HET: FAD; 2.50A {Zea mays} SCOP: b.43.4.2 c.25.1.1 PDB: 1cnf_A* 1cne_A*
Probab=96.32 E-value=0.0015 Score=49.01 Aligned_cols=29 Identities=7% Similarity=0.103 Sum_probs=24.2
Q ss_pred CCCeeEEcCChhhhh---HhHHHHcCCCCchH
Q 045945 23 RMKFPLVKSPGSLVS---RSVSKAFGLKSSSF 51 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~---~~~~~~~~~~~~~L 51 (122)
.+.++|+|||.+||+ ++++++.|++.+++
T Consensus 235 ~~~~vyvCGp~~m~~~~~~~~L~~~G~~~~~i 266 (270)
T 2cnd_A 235 DDTLALACGPPPMIQFAISPNLEKMKYDMANS 266 (270)
T ss_dssp SSEEEEEECCHHHHHTTTHHHHHTTTCCHHHH
T ss_pred CCEEEEEECCHHHHHHHHHHHHHHcCCChhhc
Confidence 456899999999998 56888999997764
No 50
>3a1f_A Cytochrome B-245 heavy chain; GP91(PHOX), NADPH binding domain, oxidoreductase; 2.00A {Homo sapiens}
Probab=96.22 E-value=0.0023 Score=44.97 Aligned_cols=26 Identities=12% Similarity=-0.032 Sum_probs=22.0
Q ss_pred CCCCeeEEcCChhhhh--HhHHHHcCCC
Q 045945 22 TRMKFPLVKSPGSLVS--RSVSKAFGLK 47 (122)
Q Consensus 22 ~~~~~~YvCGP~~fm~--~~~~~~~~~~ 47 (122)
..+.++|+|||.+||+ +++++..++.
T Consensus 145 ~~~~~v~~CGP~~m~~~v~~~l~~~g~~ 172 (186)
T 3a1f_A 145 NTRIGVFLCGPEALAETLSKQSISNSES 172 (186)
T ss_dssp TCEEEEEEESCHHHHHHHHHHHHHTCCC
T ss_pred CCcEEEEEeCCHHHHHHHHHHHHHhhcc
Confidence 3468899999999999 8888888874
No 51
>1krh_A Benzoate 1,2-dioxygenase reductase; alpha-beta, FAD-binding, ferredoxin, NADH-binding, oxidoreductase; HET: FAD; 1.50A {Acinetobacter SP} SCOP: b.43.4.2 c.25.1.2 d.15.4.2
Probab=96.05 E-value=0.0012 Score=51.46 Aligned_cols=33 Identities=18% Similarity=0.187 Sum_probs=27.9
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCCCCchHHHHH
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGLKSSSFKVSA 55 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~~~~~L~a~~ 55 (122)
.+.++|+|||.+||+ ++.+++.|++.++++.+.
T Consensus 300 ~~~~vy~CGp~~m~~~v~~~l~~~G~~~~~i~~e~ 334 (338)
T 1krh_A 300 GEVDVYLCGPVPMVEAVRSWLDTQGIQPANFLFEK 334 (338)
T ss_dssp GCSEEEEEEEHHHHHHHHHHHHHHTCCCSEEEEEE
T ss_pred CCcEEEEECCHHHHHHHHHHHHHcCCCHHHEEEEe
Confidence 567899999999999 888889999988776543
No 52
>3jqq_A Ferredoxin NADP reductase; FAD, oxidoreductase; HET: FAD A2P; 2.20A {Plasmodium falciparum} PDB: 2ok8_A* 2ok7_A* 3jqr_A* 3jqp_A*
Probab=95.09 E-value=0.0027 Score=49.59 Aligned_cols=24 Identities=8% Similarity=-0.130 Sum_probs=18.7
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCC
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGL 46 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~ 46 (122)
.+.++|+|||.+||+ ++++++.|+
T Consensus 277 ~~~~vyvCGP~~m~~~v~~~l~~~G~ 302 (316)
T 3jqq_A 277 YKCELYICGKKSIRYKVMDILKSHDQ 302 (316)
T ss_dssp TCCEEEEEECSTHHHHHHHHHHC---
T ss_pred CCeEEEEeCCHHHHHHHHHHHHHcCC
Confidence 478999999999999 778887774
No 53
>2bmw_A Ferredoxin--NADP reductase; oxidoreductase, flavoprotein, FAD, FNR, reductase reductase, phycobilisome, thylakoid; HET: FAD; 1.5A {Anabaena SP} SCOP: b.43.4.2 c.25.1.1 PDB: 1h42_A* 2vyq_A* 2vzl_A* 1ogi_A* 1ogj_A* 1gjr_A* 1e62_A* 1e64_A* 1quf_A* 1e63_A* 1go2_A* 1w34_A* 1b2r_A* 1w35_A* 1w87_A* 1que_A* 1ewy_A* 1gr1_A* 2bsa_A* 1bqe_A* ...
Probab=95.08 E-value=0.012 Score=45.03 Aligned_cols=29 Identities=10% Similarity=0.164 Sum_probs=20.2
Q ss_pred CCCCeeEEcCChhhhh--HhH----HHHcCCCCch
Q 045945 22 TRMKFPLVKSPGSLVS--RSV----SKAFGLKSSS 50 (122)
Q Consensus 22 ~~~~~~YvCGP~~fm~--~~~----~~~~~~~~~~ 50 (122)
..+.++|+|||.+||+ .++ +.+.|++..+
T Consensus 254 ~~~~~vyvCGp~~m~~~v~~~l~~~~~~~g~~~~~ 288 (304)
T 2bmw_A 254 NQKTHTYICGPPPMEEGIDAALSAAAAKEGVTWSD 288 (304)
T ss_dssp STTEEEEEEECTTHHHHHHHHHHHHHHTTTCCHHH
T ss_pred cCCcEEEEECCHHHHHHHHHHHHHHHHHcCccHHH
Confidence 3467899999999998 333 3455666544
No 54
>2b5o_A FNR, ferredoxin--NADP reductase; complex with FAD, oxidoreductase; HET: FAD; 2.50A {Synechococcus SP}
Probab=94.97 E-value=0.0071 Score=48.90 Aligned_cols=27 Identities=7% Similarity=-0.123 Sum_probs=21.4
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCCCCc
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGLKSS 49 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~~~~ 49 (122)
.+.++|+|||.+||+ .+++++.+++.+
T Consensus 353 ~~~~vyvCGP~~M~~~v~~~L~~~g~~~g 381 (402)
T 2b5o_A 353 PNTHVYMCGLKGMQPPIDETFTAEAEKRG 381 (402)
T ss_dssp TTEEEEEEECGGGHHHHHHHHHHHHHHTT
T ss_pred CCcEEEEECCHHHHHHHHHHHHHHHHHcC
Confidence 478999999999999 777776665544
No 55
>1fnb_A Ferredoxin-NADP+ reductase; oxidoreductase (NADP+(A),ferredoxin(A)); HET: FAD; 1.70A {Spinacia oleracea} SCOP: b.43.4.2 c.25.1.1 PDB: 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 1qg0_A* 1qga_A* 1qfz_A* 1qfy_A* 1gaw_A* 1gaq_A* 3mhp_A* 1sm4_A* 2xnc_A*
Probab=94.75 E-value=0.011 Score=45.68 Aligned_cols=22 Identities=0% Similarity=0.024 Sum_probs=17.3
Q ss_pred CCCeeEEcCChhhhh--HhHHHHc
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAF 44 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~ 44 (122)
.+.++|+|||.+||+ .++++++
T Consensus 265 ~~~~vyvCGp~~m~~~v~~~L~~~ 288 (314)
T 1fnb_A 265 DNTYVYMCGLKGMEKGIDDIMVSL 288 (314)
T ss_dssp TTEEEEEEECTTHHHHHHHHHHHH
T ss_pred CCeEEEEECCHHHHHHHHHHHHHH
Confidence 578999999999999 5555444
No 56
>3hrd_D Nicotinate dehydrogenase small FES subunit; selenium ligand, iron, iron-sulfur, metal-binding, oxidoreductase; HET: MCN FAD; 2.20A {Eubacterium barkeri}
Probab=94.52 E-value=0.018 Score=41.93 Aligned_cols=35 Identities=14% Similarity=0.421 Sum_probs=26.2
Q ss_pred CCCCch--HHHHHHc-CC-CcCCCCCCcccCCCeeeeeec
Q 045945 45 GLKSSS--FKVSAMA-VY-KLPYSCRAGACSTCAGLMVSG 80 (122)
Q Consensus 45 ~~~~~~--L~a~~~~-Gi-~i~~~Cr~G~CGtCkv~vl~G 80 (122)
.++++. |++++.. |+ ...++|+.|.||+|.|.| +|
T Consensus 18 ~v~p~~tLLd~LR~~lgltgtk~gC~~G~CGACtV~v-dG 56 (160)
T 3hrd_D 18 VTEPNKRLLDLLREDFGLTSVKEGCSEGECGACTVIF-NG 56 (160)
T ss_dssp EECSSSBHHHHHHTTSCCTTSCCSSSSSSSCTTEEEE-TT
T ss_pred ecCCCCCHHHHHHHhcCCCccccccCCCCCCCCEEEE-CC
Confidence 345554 6666654 66 589999999999999987 44
No 57
>3vo2_A Putative uncharacterized protein; rossmann fold, oxidoreductase, FAD binding; HET: FAD; 1.39A {Zea mays} PDB: 3vo1_A* 1gaw_A* 1gaq_A* 1qg0_A* 4af6_A* 1qga_A* 1qfz_A* 1qfy_A* 4af7_A* 1sm4_A* 3mhp_A* 1fnb_A* 1fnc_A* 1fnd_A* 1bx1_A* 1frq_A* 1frn_A* 1bx0_A* 2xnc_A*
Probab=94.27 E-value=0.027 Score=43.44 Aligned_cols=22 Identities=0% Similarity=-0.032 Sum_probs=17.1
Q ss_pred CCCCeeEEcCChhhhh--HhHHHH
Q 045945 22 TRMKFPLVKSPGSLVS--RSVSKA 43 (122)
Q Consensus 22 ~~~~~~YvCGP~~fm~--~~~~~~ 43 (122)
..+.++|+|||.+||+ ++++++
T Consensus 260 ~~~~~vyvCGp~~M~~~v~~~L~~ 283 (310)
T 3vo2_A 260 KDNTYVYMCGLKGMEKGIDDIMLN 283 (310)
T ss_dssp STTEEEEEEESTTHHHHHHHHHHH
T ss_pred cCCcEEEEeCCHHHHHHHHHHHHH
Confidence 3578999999999999 554443
No 58
>3lo8_A Ferredoxin--NADP reductase; electron transport, oxidoreductase, FAD, flavoprotein; HET: FAD; 1.05A {Zea mays} PDB: 3lvb_A* 1jb9_A*
Probab=93.87 E-value=0.043 Score=42.11 Aligned_cols=22 Identities=5% Similarity=-0.077 Sum_probs=17.1
Q ss_pred CCCeeEEcCChhhhh--HhHHHHc
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAF 44 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~ 44 (122)
...++|+|||.+||+ +++++++
T Consensus 262 ~~~~vyvCGp~~m~~~v~~~L~~~ 285 (311)
T 3lo8_A 262 GGAHIYFCGLKGMMPGIQDTLKKV 285 (311)
T ss_dssp TTCEEEEEECGGGHHHHHHHHHHH
T ss_pred CCcEEEEECCHHHHHHHHHHHHHH
Confidence 568999999999999 5444443
No 59
>1ffv_A CUTS, iron-sulfur protein of carbon monoxide dehydrogenase; hydrolase; HET: ARO PCD FAD; 2.25A {Hydrogenophaga pseudoflava} SCOP: a.56.1.1 d.15.4.2 PDB: 1ffu_A*
Probab=93.84 E-value=0.033 Score=40.49 Aligned_cols=35 Identities=11% Similarity=0.338 Sum_probs=24.9
Q ss_pred CCCCch--HHHHHHc-CC-CcCCCCCCcccCCCeeeeeec
Q 045945 45 GLKSSS--FKVSAMA-VY-KLPYSCRAGACSTCAGLMVSG 80 (122)
Q Consensus 45 ~~~~~~--L~a~~~~-Gi-~i~~~Cr~G~CGtCkv~vl~G 80 (122)
.++++. |+++... |+ ..+++|+.|.||+|.|.| +|
T Consensus 18 ~v~~~~tLLd~LR~~lgltg~k~gC~~G~CGaCtV~v-dG 56 (163)
T 1ffv_A 18 AVEPRTLLIHFLREELNLTGAHIGCETSHCGACTVDI-DG 56 (163)
T ss_dssp EECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEE-TT
T ss_pred ecCCCCcHHHHHHhcCCCcccccCCCCCCCCCCEEEE-CC
Confidence 344444 6666542 44 469999999999999988 44
No 60
>1n62_A Carbon monoxide dehydrogenase small chain; CODH, molybdenum, molybdopterin, oxidoreductase; HET: CUB MCN FAD; 1.09A {Oligotropha carboxidovorans} SCOP: a.56.1.1 d.15.4.2 PDB: 1n5w_A* 1n61_A* 1n60_A* 1n63_A* 1zxi_A*
Probab=93.68 E-value=0.037 Score=40.38 Aligned_cols=34 Identities=12% Similarity=0.340 Sum_probs=24.5
Q ss_pred CCCch--HHHHHHc-CC-CcCCCCCCcccCCCeeeeeec
Q 045945 46 LKSSS--FKVSAMA-VY-KLPYSCRAGACSTCAGLMVSG 80 (122)
Q Consensus 46 ~~~~~--L~a~~~~-Gi-~i~~~Cr~G~CGtCkv~vl~G 80 (122)
++++. |+++... |+ ..+++|+.|.||+|.|.| +|
T Consensus 19 v~~~~tLLd~LR~~lgl~g~k~gC~~G~CGaCtV~v-dG 56 (166)
T 1n62_A 19 VEPRTLLIHFIREQQNLTGAHIGCDTSHCGACTVDL-DG 56 (166)
T ss_dssp ECTTCBHHHHHHHTSCCTTSCCCCSSSCSCTTEEEE-TT
T ss_pred cCCCCcHHHHHHHcCCCCccccCCCCCCCCCCEEEE-CC
Confidence 44444 6666553 44 468999999999999988 44
No 61
>1f20_A Nitric-oxide synthase; nitric-xoide synthase, reductase domain, FAD, NADP+, oxidore; HET: FAD NAP; 1.90A {Rattus norvegicus} SCOP: b.43.4.1 c.25.1.4
Probab=93.65 E-value=0.021 Score=46.86 Aligned_cols=26 Identities=4% Similarity=-0.104 Sum_probs=19.8
Q ss_pred CCCeeEEcCChhhhh--HhHHHHcCCCC
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAFGLKS 48 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~~~~~ 48 (122)
.++++|+|||.+||+ .+++.+++...
T Consensus 380 ~~~~vYvCGp~~M~~~V~~~L~~i~~~~ 407 (435)
T 1f20_A 380 QGGHIYVCGDVTMAADVLKAIQRIMTQQ 407 (435)
T ss_dssp SCCEEEEEECHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCChhHHHHHHHHHHHHHHHc
Confidence 578999999999998 66666555443
No 62
>1tll_A Nitric-oxide synthase, brain; reductase module, FMN, FAD, NADP+, oxidoreductase; HET: FMN FAD NAP; 2.30A {Rattus norvegicus} SCOP: b.43.4.1 c.23.5.2 c.25.1.4
Probab=93.06 E-value=0.066 Score=46.42 Aligned_cols=28 Identities=7% Similarity=-0.013 Sum_probs=21.2
Q ss_pred CCCeeEEcCChhhhh--HhHHHHc-----CCCCch
Q 045945 23 RMKFPLVKSPGSLVS--RSVSKAF-----GLKSSS 50 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~--~~~~~~~-----~~~~~~ 50 (122)
.+.++|+|||.+||+ .+++.++ |+.+.+
T Consensus 601 ~~~~vYvCGp~~M~~~V~~~L~~i~~~~gg~~~~~ 635 (688)
T 1tll_A 601 QGGHIYVCGDVTMAADVLKAIQRIMTQQGKLSEED 635 (688)
T ss_dssp SCCEEEEEEEHHHHHHHHHHHHHHHHTTTCCCTTH
T ss_pred CCcEEEEeCCHHHHHHHHHHHHHHHHHcCCCCHHH
Confidence 578999999999999 6666655 565443
No 63
>1rm6_C 4-hydroxybenzoyl-COA reductase gamma subunit; xanthine oxidase family, dimer heterotrimers, oxidoreductase; HET: PCD FAD SF4 EPE; 1.60A {Thauera aromatica} SCOP: a.56.1.1 d.15.4.2 PDB: 1sb3_C*
Probab=92.81 E-value=0.088 Score=37.96 Aligned_cols=29 Identities=17% Similarity=0.409 Sum_probs=23.4
Q ss_pred HHHHHHc-CC-CcCCCCCCcccCCCeeeeeec
Q 045945 51 FKVSAMA-VY-KLPYSCRAGACSTCAGLMVSG 80 (122)
Q Consensus 51 L~a~~~~-Gi-~i~~~Cr~G~CGtCkv~vl~G 80 (122)
|+++... |+ ..+++|+.|.||+|.|.| +|
T Consensus 25 L~~Lr~~~gl~g~k~gC~~G~CGaCtV~v-dG 55 (161)
T 1rm6_C 25 LDYLRETVGLTGTKQGCDGGECGACTVLV-DD 55 (161)
T ss_dssp HHHHHHTTCCTTSCCCSSSSSSCTTEEEE-TT
T ss_pred HHHHHHcCCCcccccCCCCCCCCCCEEEE-CC
Confidence 6666664 54 588999999999999988 55
No 64
>4dql_A Bifunctional P-450/NADPH-P450 reductase; rossmann fold, redox, FAD and NADP+ binding, oxidoreductase; HET: FAD NAP 1PE PG4; 2.15A {Bacillus megaterium} PDB: 4dqk_A*
Probab=91.93 E-value=0.073 Score=43.11 Aligned_cols=21 Identities=10% Similarity=0.021 Sum_probs=16.0
Q ss_pred CCCeeEEcCChhhhh---HhHHHH
Q 045945 23 RMKFPLVKSPGSLVS---RSVSKA 43 (122)
Q Consensus 23 ~~~~~YvCGP~~fm~---~~~~~~ 43 (122)
.++++|+|||.++|. .+++.+
T Consensus 337 ~~~~vYvCGp~~~M~~~V~~~L~~ 360 (393)
T 4dql_A 337 QGAHFYICGDGSQMAPAVEATLMK 360 (393)
T ss_dssp TTCEEEEEEETTTHHHHHHHHHHH
T ss_pred CCcEEEEECCchhhHHHHHHHHHH
Confidence 578999999998887 444444
No 65
>2rc5_A Ferredoxin-NADP reductase; FAD, oxidoreductase; HET: FAD; 2.43A {Leptospira interrogans} PDB: 2rc6_A*
Probab=91.08 E-value=0.058 Score=41.39 Aligned_cols=20 Identities=5% Similarity=-0.047 Sum_probs=17.2
Q ss_pred eEEc-CChhhhh--HhHHHHcCC
Q 045945 27 PLVK-SPGSLVS--RSVSKAFGL 46 (122)
Q Consensus 27 ~YvC-GP~~fm~--~~~~~~~~~ 46 (122)
+|+| ||.+||+ +++++++++
T Consensus 269 ~yvCGGp~~m~~~v~~~L~~~g~ 291 (314)
T 2rc5_A 269 FYICGGPKGMEKGVIEEIQKISG 291 (314)
T ss_dssp EEEEESSTTTHHHHHHHHHHHHT
T ss_pred EEEeCCcHHHHHHHHHHHHHHHh
Confidence 4999 9999999 777777776
No 66
>3vr8_B Iron-sulfur subunit of succinate dehydrogenase; membrane protein, reductase, mitochondria MEMB oxidoreductase; HET: FAD HEM RQX EPH; 2.81A {Ascaris suum} PDB: 3vrb_B*
Probab=90.74 E-value=0.12 Score=40.55 Aligned_cols=31 Identities=26% Similarity=0.521 Sum_probs=23.0
Q ss_pred HHHHHHcC------CCcCCCCCCcccCCCeeeeeeccc
Q 045945 51 FKVSAMAV------YKLPYSCRAGACSTCAGLMVSGSV 82 (122)
Q Consensus 51 L~a~~~~G------i~i~~~Cr~G~CGtCkv~vl~G~v 82 (122)
|+++...+ +...++|+.|+||+|.+.| .|..
T Consensus 69 LdaL~~i~~~~~ptl~~~~~C~~G~CGsC~V~I-nG~~ 105 (282)
T 3vr8_B 69 LDALIKIKNEVDPTLTFRRSCREGICGSCAMNI-AGEN 105 (282)
T ss_pred HHHHHhcCcccCCceeecCCCCCCCCCCCEEEE-CCEE
Confidence 77776544 3456799999999999876 5653
No 67
>1ddg_A Sulfite reductase (NADPH) flavoprotein alpha- component; cytochrome P450 reductase, FNR, modular protein, oxidoreductase; HET: FAD; 2.01A {Escherichia coli} SCOP: b.43.4.1 c.25.1.4 PDB: 1ddi_A*
Probab=88.22 E-value=0.18 Score=40.39 Aligned_cols=22 Identities=5% Similarity=-0.085 Sum_probs=16.7
Q ss_pred CCCeeEEcC-Chhhhh--HhHHHHc
Q 045945 23 RMKFPLVKS-PGSLVS--RSVSKAF 44 (122)
Q Consensus 23 ~~~~~YvCG-P~~fm~--~~~~~~~ 44 (122)
.++++|+|| |.+|++ .+++.++
T Consensus 320 ~~~~vYvCG~p~~M~~~V~~~L~~i 344 (374)
T 1ddg_A 320 DGAHIYVCGDANRMAKDVEQALLEV 344 (374)
T ss_dssp TTCEEEEEECTTTHHHHHHHHHHHH
T ss_pred CCcEEEEECCCHHHHHHHHHHHHHH
Confidence 478999999 999998 4444443
No 68
>2k02_A Ferrous iron transport protein C; FEOC, iron-sulfur, metal-binding, metal binding protein; NMR {Klebsiella pneumoniae subsp}
Probab=88.00 E-value=0.21 Score=32.69 Aligned_cols=38 Identities=13% Similarity=0.298 Sum_probs=30.6
Q ss_pred HhHHHHcCCCCch----HHHHHHcCCC-----cCCCCCCcccCCCee
Q 045945 38 RSVSKAFGLKSSS----FKVSAMAVYK-----LPYSCRAGACSTCAG 75 (122)
Q Consensus 38 ~~~~~~~~~~~~~----L~a~~~~Gi~-----i~~~Cr~G~CGtCkv 75 (122)
.++++.|++++.. |+.+.+.|.- .+.+|..|.|++|.-
T Consensus 20 ~eLA~~l~VS~~TIRrDL~~Le~~G~l~R~~~~~~~C~sgsC~sC~~ 66 (87)
T 2k02_A 20 KQLSARLQTPQPLIDAMLERMEAMGKVVRISETSEGCLSGSCKSCPE 66 (87)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHTTCCSEEEEEECCSSCSSSSSSCSS
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCCCCCC
Confidence 7888999999987 7777888864 346899899999953
No 69
>3nvw_A Xanthine dehydrogenase/oxidase; hydroxylase, homodimer, xanthine oxidase, guanine, oxidoredu; HET: FAD MTE GUN; 1.60A {Bos taurus} PDB: 3etr_A* 3ns1_A* 3nvv_A* 3nrz_A* 3nvy_A* 3nvz_A* 3rca_A* 3sr6_A* 3eub_A*
Probab=87.00 E-value=0.65 Score=33.79 Aligned_cols=34 Identities=12% Similarity=0.346 Sum_probs=25.6
Q ss_pred CCCCch--HHHHHHc-CC-CcCCCCCCcccCCCeeeee
Q 045945 45 GLKSSS--FKVSAMA-VY-KLPYSCRAGACSTCAGLMV 78 (122)
Q Consensus 45 ~~~~~~--L~a~~~~-Gi-~i~~~Cr~G~CGtCkv~vl 78 (122)
.++++. |++++.. |+ ...++|+.|.||.|-|.|-
T Consensus 18 ~~~p~~~Ll~~LR~~lgltGtK~GC~~G~CGACTVlvd 55 (164)
T 3nvw_A 18 NADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLS 55 (164)
T ss_dssp TCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEE
T ss_pred cCCCCCCHHHHHHHHcCCCCcCCCcCCCCCCCCEEEEc
Confidence 455554 6766653 54 6899999999999999874
No 70
>2qtl_A MSR;, methionine synthase reductase; alpha-beta-alpha structural motif, flattened antiparallel BE barrel, flexible hinge region, connecting domain; HET: FAD; 1.90A {Homo sapiens} PDB: 2qtz_A*
Probab=85.66 E-value=0.3 Score=41.23 Aligned_cols=15 Identities=7% Similarity=-0.017 Sum_probs=13.2
Q ss_pred CCCeeEEcCCh-hhhh
Q 045945 23 RMKFPLVKSPG-SLVS 37 (122)
Q Consensus 23 ~~~~~YvCGP~-~fm~ 37 (122)
.++++|+|||. +|++
T Consensus 484 ~~a~vYVCGp~~~M~~ 499 (539)
T 2qtl_A 484 ENGHIYVCGDAKNMAK 499 (539)
T ss_dssp SCCEEEEEESCHHHHH
T ss_pred CCcEEEEECCCHHHHH
Confidence 47899999996 9988
No 71
>1xn7_A Hypothetical protein YHGG; alpha+beta, GFT structural genomics, protein structure initiative, PSI, NESG; NMR {Escherichia coli} SCOP: a.4.5.62
Probab=84.65 E-value=0.63 Score=29.62 Aligned_cols=38 Identities=16% Similarity=0.381 Sum_probs=30.0
Q ss_pred HhHHHHcCCCCch----HHHHHHcCCC-----cCCCCCCcccCCCee
Q 045945 38 RSVSKAFGLKSSS----FKVSAMAVYK-----LPYSCRAGACSTCAG 75 (122)
Q Consensus 38 ~~~~~~~~~~~~~----L~a~~~~Gi~-----i~~~Cr~G~CGtCkv 75 (122)
.++++.|++++.. |+.+.+.|.- -...|..|.|++|.-
T Consensus 20 ~eLa~~l~VS~~TIRrdL~~Le~~G~l~R~~~~GgaC~~g~C~~C~~ 66 (78)
T 1xn7_A 20 AQISQTLNTPQPMINAMLQQLESMGKAVRIQEEPDGCLSGSCKSCPE 66 (78)
T ss_dssp HHHHHHTTCCHHHHHHHHHHHHHHTSEEEECCCCCCCCCSSCCCCCC
T ss_pred HHHHHHHCcCHHHHHHHHHHHHHCCCEEEecCcCCCCCCCCCCCCCC
Confidence 7888999999887 7777788864 245798889999953
No 72
>2w3s_A Xanthine dehydrogenase; XO, XDH, GOUT, iron, 2Fe-2S, iron-sulfur, oxidoreductase, purine metabolism, molybdenum cofactor, hypoxanthine; HET: MPN FAD XAN; 2.60A {Rhodobacter capsulatus} PDB: 2w3r_A* 2w54_A* 2w55_A* 1jro_A* 1jrp_A*
Probab=84.07 E-value=0.88 Score=37.76 Aligned_cols=27 Identities=15% Similarity=0.412 Sum_probs=22.1
Q ss_pred HHHHHHcCC-CcCCCCCCcccCCCeeee
Q 045945 51 FKVSAMAVY-KLPYSCRAGACSTCAGLM 77 (122)
Q Consensus 51 L~a~~~~Gi-~i~~~Cr~G~CGtCkv~v 77 (122)
|+++...|+ ...++|+.|.||+|-|.|
T Consensus 24 l~~Lr~~~l~g~k~gC~~G~CGaCtV~v 51 (462)
T 2w3s_A 24 LEWLRAEGLTGTKEGCNEGDCGACTVMI 51 (462)
T ss_dssp HHHHHHTTCTTSCCSCSSSSSCTTEEEE
T ss_pred HHHHHHcCCCccCCCCCCCCcCCcEEEE
Confidence 666664455 489999999999999988
No 73
>2bpo_A CPR, P450R, NADPH-cytochrom P450 reductase; NADPH-cytochrome P450 reductase, diflavin reductase, FAD, FMN-binding, electron transfer; HET: FAD FMN NAP; 2.9A {Saccharomyces cerevisiae} PDB: 2bn4_A* 2bf4_A*
Probab=82.97 E-value=0.47 Score=40.96 Aligned_cols=21 Identities=10% Similarity=0.026 Sum_probs=15.8
Q ss_pred CCCeeEEcCC-hhhhh--HhHHHH
Q 045945 23 RMKFPLVKSP-GSLVS--RSVSKA 43 (122)
Q Consensus 23 ~~~~~YvCGP-~~fm~--~~~~~~ 43 (122)
.++++|+||| .+|++ .+++.+
T Consensus 628 ~~~~vYvCGpa~~M~~~V~~~L~~ 651 (682)
T 2bpo_A 628 NGAFIYVCGDAKGMAKGVSTALVG 651 (682)
T ss_dssp TTCEEEEEECSTTHHHHHHHHHHH
T ss_pred CCcEEEEeCCchHhHHHHHHHHHH
Confidence 4789999999 79998 444433
No 74
>3qe2_A CPR, P450R, NADPH--cytochrome P450 reductase; cypor, antley-bixler syndrome, flavoprotein, FMN, FAD, oxidoreductase; HET: FAD FMN NAP; 1.75A {Homo sapiens} PDB: 3qfc_A* 3qfr_A* 1amo_A* 1j9z_A* 1ja0_A* 1ja1_A* 3es9_A* 3ojw_A* 3ojx_A* 3fjo_A* 1b1c_A*
Probab=80.43 E-value=0.53 Score=40.19 Aligned_cols=21 Identities=5% Similarity=-0.092 Sum_probs=15.2
Q ss_pred CCCeeEEcCCh-hhhh--HhHHHH
Q 045945 23 RMKFPLVKSPG-SLVS--RSVSKA 43 (122)
Q Consensus 23 ~~~~~YvCGP~-~fm~--~~~~~~ 43 (122)
.++++|+|||. +|++ .+++.+
T Consensus 563 ~~a~vYvCGp~~~M~~~V~~~L~~ 586 (618)
T 3qe2_A 563 GGAHIYVCGDARNMARDVQNTFYD 586 (618)
T ss_dssp HTCEEEEEEETTTHHHHHHHHHHH
T ss_pred CCcEEEEECCchHHHHHHHHHHHH
Confidence 36799999995 8888 444433
No 75
>3qfs_A CPR, P450R, NADPH--cytochrome P450 reductase; flavoprotein, FAD, oxidoreductase; HET: FAD NAP; 1.40A {Homo sapiens} PDB: 3qft_A*
Probab=80.00 E-value=0.59 Score=38.70 Aligned_cols=21 Identities=5% Similarity=-0.092 Sum_probs=14.8
Q ss_pred CCCeeEEcCCh-hhhh--HhHHHH
Q 045945 23 RMKFPLVKSPG-SLVS--RSVSKA 43 (122)
Q Consensus 23 ~~~~~YvCGP~-~fm~--~~~~~~ 43 (122)
.++++|+|||. .|++ .+++.+
T Consensus 403 ~~~~vYvCGp~~~M~~~V~~~L~~ 426 (458)
T 3qfs_A 403 GGAHIYVCGDARNMARDVQNTFYD 426 (458)
T ss_dssp TTCEEEEEEETTTHHHHHHHHHHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHH
Confidence 47899999996 5666 444443
No 76
>1vlb_A Aldehyde oxidoreductase; iron-sulphur cluster; HET: PCD; 1.28A {Desulfovibrio gigas} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1 PDB: 1sij_A* 1zcs_A* 3fah_A* 3fc4_A* 3l4p_A*
Probab=75.73 E-value=1.4 Score=39.45 Aligned_cols=29 Identities=21% Similarity=0.517 Sum_probs=22.9
Q ss_pred HHHHHH-cCC-CcCCCCCCcccCCCeeeeeec
Q 045945 51 FKVSAM-AVY-KLPYSCRAGACSTCAGLMVSG 80 (122)
Q Consensus 51 L~a~~~-~Gi-~i~~~Cr~G~CGtCkv~vl~G 80 (122)
|++++. .|. ...++|+.|.||+|-+.| +|
T Consensus 24 l~~Lr~~~~l~g~k~gC~~g~CGaCtv~v-dg 54 (907)
T 1vlb_A 24 SDVLRQQLGLTGVKVGCEQGQCGACSVIL-DG 54 (907)
T ss_dssp HHHHHHTTCCTTSCCSSSSSSSCTTEEEE-TT
T ss_pred HHHHHHhcCCCeecCCCCCCCcCccEEEE-CC
Confidence 666654 355 689999999999999987 44
No 77
>1dgj_A Aldehyde oxidoreductase; beta half-barrel, four-helix bundle, beta barrel; HET: MCN; 2.80A {Desulfovibrio desulfuricans} SCOP: a.56.1.1 d.15.4.2 d.41.1.1 d.133.1.1
Probab=75.09 E-value=1.5 Score=39.31 Aligned_cols=29 Identities=21% Similarity=0.556 Sum_probs=23.2
Q ss_pred HHHHHH-cCC-CcCCCCCCcccCCCeeeeeec
Q 045945 51 FKVSAM-AVY-KLPYSCRAGACSTCAGLMVSG 80 (122)
Q Consensus 51 L~a~~~-~Gi-~i~~~Cr~G~CGtCkv~vl~G 80 (122)
|++++. .|. ...++|+.|.||+|-+.| +|
T Consensus 24 l~~Lr~~~~l~g~k~gC~~G~CGaCtv~v-dg 54 (907)
T 1dgj_A 24 VDVLRSQLQLTSVKVGCGKGQCGACTVIL-DG 54 (907)
T ss_dssp HHHHHHTTCCTTSCCSSSSSSSCTTEEEE-TT
T ss_pred HHHHHHhcCCCccCCCCCCCCcCceEEEE-CC
Confidence 666665 355 689999999999999987 44
No 78
>3unc_A Xanthine dehydrogenase/oxidase; oxidoreductase; HET: MTE FAD SAL; 1.65A {Bos taurus} PDB: 3una_A* 3uni_A* 1v97_A* 1fo4_A* 1vdv_A* 3am9_A* 3amz_A* 3ax7_A* 3ax9_A* 3bdj_A* 1n5x_A* 2ckj_A* 2e1q_A* 3an1_A* 2e3t_A* 1wyg_A* 3b9j_B* 1fiq_B* 3b9j_A* 1fiq_A*
Probab=36.50 E-value=28 Score=32.51 Aligned_cols=34 Identities=12% Similarity=0.346 Sum_probs=24.6
Q ss_pred CCCCch--HHHHHHc-CC-CcCCCCCCcccCCCeeeee
Q 045945 45 GLKSSS--FKVSAMA-VY-KLPYSCRAGACSTCAGLMV 78 (122)
Q Consensus 45 ~~~~~~--L~a~~~~-Gi-~i~~~Cr~G~CGtCkv~vl 78 (122)
.++++. |+.++.. |+ ...++|+.|.||.|-|-|-
T Consensus 19 ~~~p~~~ll~~LR~~~~ltgtk~gC~~g~CGaCtV~~~ 56 (1332)
T 3unc_A 19 NADPETTLLAYLRRKLGLRGTKLGCGEGGCGACTVMLS 56 (1332)
T ss_dssp TCCTTCBHHHHHHHTSCCTTSCCSCSSSSSCTTEEEEE
T ss_pred cCCCCCCHHHHHhhhcCCCCcCCCcCCCCCCCcEEEEe
Confidence 345544 6666542 54 4889999999999999883
No 79
>4e6k_G BFD, bacterioferritin-associated ferredoxin; protein complex, iron storage, iron binding, iron mobilizati ferritin, iron homeostasis; HET: HEM; 2.00A {Pseudomonas aeruginosa}
Probab=24.94 E-value=11 Score=23.49 Aligned_cols=33 Identities=15% Similarity=0.273 Sum_probs=16.5
Q ss_pred CCCCchHHHHHHcCCC------cCCCCCCcccCCCeeeee
Q 045945 45 GLKSSSFKVSAMAVYK------LPYSCRAGACSTCAGLMV 78 (122)
Q Consensus 45 ~~~~~~L~a~~~~Gi~------i~~~Cr~G~CGtCkv~vl 78 (122)
++.++++..+.++|.. -...++.| ||+|+-.+.
T Consensus 8 ~Vt~~~I~~AI~~Ga~t~~~v~~~t~aGt~-CG~C~~~i~ 46 (73)
T 4e6k_G 8 GVTDNQIRDAIYEGCCSYREVREATGVGTQ-CGKCASLAK 46 (73)
T ss_dssp TEEHHHHHHHHHTTCCSHHHHHHHHCTTSS-SCTTHHHHH
T ss_pred CcCHHHHHHHHHhcCCCHHHHHHHhCCCCC-CCchHHHHH
Confidence 3444444444444432 12234444 899986553
No 80
>3zyv_A AOH1; oxidoreductase, molybdenum cofactor; HET: MTE FAD; 2.54A {Mus musculus}
Probab=21.39 E-value=38 Score=31.57 Aligned_cols=28 Identities=18% Similarity=0.473 Sum_probs=20.8
Q ss_pred HHHHHHc-CC-CcCCCCCCcccCCCeeeee
Q 045945 51 FKVSAMA-VY-KLPYSCRAGACSTCAGLMV 78 (122)
Q Consensus 51 L~a~~~~-Gi-~i~~~Cr~G~CGtCkv~vl 78 (122)
|+.++.+ |+ .-..+|..|.||.|-|-|-
T Consensus 31 l~~LR~~~~ltGTK~gC~EG~CGACtV~v~ 60 (1335)
T 3zyv_A 31 LFYLRKVIRLTGTKYGCGGGDCGACTVMIS 60 (1335)
T ss_dssp HHHHHHTTCCTTSCCSCSSSSSCTTEEEEE
T ss_pred HHHHhccCCCcccccccCCCCCcceEEEEe
Confidence 6666542 33 3667999999999999885
No 81
>2lg4_A Aurelin; antimicrobial protein; NMR {Aurelia aurita}
Probab=23.93 E-value=24 Score=19.73 Aligned_cols=17 Identities=29% Similarity=0.688 Sum_probs=12.5
Q ss_pred HcCCCcCCCCCCcccCCC
Q 045945 56 MAVYKLPYSCRAGACSTC 73 (122)
Q Consensus 56 ~~Gi~i~~~Cr~G~CGtC 73 (122)
++|..+.+.|+. +||.|
T Consensus 24 ~ng~~~r~~C~k-TCG~C 40 (40)
T 2lg4_A 24 RNGVKLRANCKK-TCGLC 40 (40)
Confidence 678889999974 46655
Done!