Query 045947
Match_columns 101
No_of_seqs 157 out of 1093
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 12:17:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045947.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045947hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2fo3_A Ubiquitin-conjugating e 100.0 1.8E-43 6.3E-48 221.7 10.8 100 2-101 7-107 (125)
2 4gpr_A Ubiquitin-conjugating e 100.0 5.5E-43 1.9E-47 225.6 11.1 101 1-101 4-104 (151)
3 2h2y_A Ubiquitin-conjugating e 100.0 9.8E-43 3.3E-47 221.1 11.9 100 2-101 21-121 (136)
4 2ayv_A Ubiquitin-conjugating e 100.0 1.1E-42 3.6E-47 227.3 11.9 101 1-101 21-121 (166)
5 1z2u_A Ubiquitin-conjugating e 100.0 7.7E-43 2.6E-47 224.7 10.1 101 1-101 4-104 (150)
6 2r0j_A Ubiquitin carrier prote 100.0 8.4E-43 2.9E-47 224.3 10.0 100 2-101 2-101 (149)
7 2c4o_A Ubiquitin-conjugating e 100.0 1.5E-42 5.3E-47 226.3 11.4 101 1-101 19-119 (165)
8 2c2v_B Ubiquitin-conjugating e 100.0 9.6E-43 3.3E-47 225.1 9.4 100 2-101 6-105 (154)
9 1fxt_A Ubiquitin-conjugating e 100.0 7.9E-43 2.7E-47 224.4 8.9 101 1-101 1-103 (149)
10 1ayz_A UBC2, ubiquitin-conjuga 100.0 2E-42 6.7E-47 226.6 10.7 100 2-101 5-104 (169)
11 2e2c_A Ubiquitin conjugating e 100.0 3.3E-42 1.1E-46 223.0 11.2 101 1-101 9-109 (156)
12 2a7l_A Hypothetical ubiquitin- 100.0 1.7E-42 5.7E-47 219.9 9.5 99 3-101 24-126 (136)
13 1jat_A Ubiquitin-conjugating e 100.0 2E-42 6.9E-47 223.8 9.9 101 1-101 5-105 (155)
14 1zdn_A Ubiquitin-conjugating e 100.0 3E-42 1E-46 223.6 10.5 99 2-100 14-112 (158)
15 2aak_A UBC1, ubiquitin conjuga 100.0 5E-42 1.7E-46 221.3 10.8 100 2-101 5-104 (152)
16 3h8k_A Ubiquitin-conjugating e 100.0 8.3E-42 2.8E-46 222.6 11.8 100 2-101 4-117 (164)
17 1yh2_A HSPC150 protein similar 100.0 1.1E-41 3.9E-46 222.9 11.8 100 2-101 5-108 (169)
18 2ucz_A UBC7, ubiquitin conjuga 100.0 1.3E-41 4.4E-46 221.9 11.8 100 2-101 5-118 (165)
19 1i7k_A Ubiquitin-conjugating e 100.0 5.3E-42 1.8E-46 226.2 10.0 101 1-101 30-130 (179)
20 3rcz_B SUMO-conjugating enzyme 100.0 1.8E-41 6.1E-46 220.9 10.2 100 2-101 11-117 (163)
21 3bzh_A Ubiquitin-conjugating e 100.0 3.4E-41 1.1E-45 224.7 11.8 99 2-100 49-147 (194)
22 2awf_A Ubiquitin-conjugating e 100.0 4E-41 1.4E-45 220.9 11.9 101 1-101 17-131 (172)
23 3rz3_A Ubiquitin-conjugating e 100.0 6.8E-41 2.3E-45 221.6 11.7 100 2-101 8-121 (183)
24 2f4z_A Tgtwinscan_2721 - E2 do 100.0 4.9E-41 1.7E-45 223.7 10.6 101 1-101 32-146 (193)
25 1yrv_A Ubiquitin-conjugating l 100.0 2.2E-41 7.4E-46 221.6 8.6 100 2-101 24-126 (169)
26 2pwq_A Ubiquitin conjugating e 100.0 2.7E-41 9.1E-46 228.3 9.0 100 2-101 24-124 (216)
27 2bep_A Ubiquitin-conjugating e 100.0 8.3E-41 2.8E-45 217.0 11.0 100 2-101 9-112 (159)
28 3k9o_A Ubiquitin-conjugating e 100.0 1.4E-40 5E-45 222.8 11.2 101 1-101 5-109 (201)
29 2gjd_A Ubiquitin-conjugating e 100.0 1E-40 3.6E-45 216.1 9.7 100 2-101 5-111 (157)
30 1wzv_A Ubiquitin-conjugating e 100.0 1.3E-40 4.6E-45 215.2 10.1 100 1-101 4-105 (155)
31 2grr_A Ubiquitin-conjugating e 100.0 3E-40 1E-44 214.7 9.7 100 2-101 8-114 (161)
32 2a4d_A Ubiquitin-conjugating e 100.0 7.3E-40 2.5E-44 212.6 11.1 100 2-101 26-132 (160)
33 1tte_A Ubiquitin-conjugating e 100.0 7E-41 2.4E-45 226.1 6.0 101 1-101 2-104 (215)
34 1y8x_A Ubiquitin-conjugating e 100.0 7.1E-40 2.4E-44 212.8 10.1 97 2-101 7-104 (160)
35 3e46_A Ubiquitin-conjugating e 100.0 2.3E-39 7.9E-44 223.0 11.1 100 2-101 58-161 (253)
36 2nvu_C NEDD8-conjugating enzym 100.0 1.6E-39 5.4E-44 214.6 9.3 97 2-101 27-124 (180)
37 4ds2_A Ubiquitin-conjugating e 100.0 3.9E-40 1.3E-44 215.3 6.3 99 2-100 9-121 (167)
38 3fn1_B NEDD8-conjugating enzym 100.0 3.8E-39 1.3E-43 210.6 10.3 99 2-101 15-120 (167)
39 2q0v_A Ubiquitin-conjugating e 100.0 4E-39 1.4E-43 208.5 10.2 99 2-101 22-127 (156)
40 1c4z_D UBCH7, ubiquitin conjug 100.0 1.4E-39 4.7E-44 210.3 8.0 100 1-101 2-103 (154)
41 1jat_B Ubiquitin-conjugating e 100.0 4.9E-39 1.7E-43 204.5 9.7 99 2-101 7-112 (138)
42 2onu_A Ubiquitin-conjugating e 100.0 3.4E-40 1.1E-44 212.8 4.3 96 2-100 3-99 (152)
43 2hlw_A Ubiquitin-conjugating e 100.0 2.5E-39 8.6E-44 211.9 8.4 100 2-101 36-142 (170)
44 2y9m_A Ubiquitin-conjugating e 100.0 1.6E-38 5.6E-43 208.5 10.6 100 2-101 7-121 (172)
45 4ddg_A Ubiquitin-conjugating e 100.0 9.1E-39 3.1E-43 232.0 10.1 101 1-101 3-103 (399)
46 2z5d_A Ubiquitin-conjugating e 100.0 4.5E-39 1.5E-43 212.1 7.3 96 2-101 26-122 (179)
47 3o2u_A NEDD8-conjugating enzym 100.0 6.5E-38 2.2E-42 208.4 9.6 97 2-101 30-133 (190)
48 2f4w_A Ubiquitin-conjugating e 100.0 9.9E-38 3.4E-42 207.0 10.3 99 1-101 14-115 (187)
49 1yf9_A Ubiquitin carrier prote 100.0 2.8E-38 9.5E-43 207.2 7.4 96 2-101 13-109 (171)
50 1zuo_A Hypothetical protein LO 100.0 3.3E-38 1.1E-42 209.2 5.5 100 2-101 28-144 (186)
51 3ceg_A Baculoviral IAP repeat- 100.0 4.3E-36 1.5E-40 212.1 10.6 99 2-100 77-192 (323)
52 2z6o_A UFM1-conjugating enzyme 100.0 5.1E-32 1.8E-36 174.8 0.1 92 3-100 34-140 (172)
53 3kpa_A Probable ubiquitin fold 99.9 5.8E-24 2E-28 134.8 0.6 87 3-98 36-133 (168)
54 3r3q_A Suppressor protein STP2 99.8 4.6E-19 1.6E-23 114.8 5.4 96 4-100 31-144 (162)
55 3obq_A Tumor susceptibility ge 99.5 7.3E-15 2.5E-19 93.6 5.0 89 5-99 24-125 (146)
56 2ebm_A RWD domain-containing p 97.3 0.0024 8.1E-08 38.9 8.2 66 4-71 13-78 (128)
57 2day_A Ring finger protein 25; 97.0 0.0079 2.7E-07 36.5 8.6 68 5-72 12-83 (128)
58 2yz0_A Serine/threonine-protei 96.9 0.014 4.9E-07 35.8 9.5 67 5-72 14-86 (138)
59 1ukx_A GCN2, GCN2 EIF2alpha ki 95.9 0.063 2.1E-06 32.8 7.7 67 4-71 13-86 (137)
60 2ebk_A RWD domain-containing p 95.5 0.04 1.4E-06 33.4 5.7 66 5-71 11-79 (128)
61 2dax_A Protein C21ORF6; RWD do 93.6 0.055 1.9E-06 33.8 3.0 24 49-72 74-97 (152)
62 2daw_A RWD domain containing p 93.6 0.087 3E-06 33.1 3.9 24 49-72 76-99 (154)
63 3zqs_A E3 ubiquitin-protein li 91.9 1 3.5E-05 29.3 7.3 58 4-72 4-62 (186)
64 3u3c_B Paxillin LD2 peptide; 4 77.5 2 7E-05 18.3 2.0 19 3-21 7-25 (26)
65 2bum_A Protocatechuate 3,4-dio 62.7 8.2 0.00028 25.4 3.5 27 45-71 108-139 (209)
66 3pft_A Flavin reductase; desul 47.9 10 0.00035 23.4 2.0 67 8-91 5-74 (157)
67 3t63_M 3,4-PCD, protocatechuat 44.8 14 0.00049 24.8 2.5 25 46-70 133-164 (238)
68 2bum_B Protocatechuate 3,4-dio 44.8 14 0.00049 24.8 2.5 26 46-71 134-166 (241)
69 2xsu_A Catechol 1,2 dioxygenas 42.0 16 0.00055 25.5 2.4 25 46-70 187-229 (312)
70 3t63_A 3,4-PCD, protocatechuat 42.0 18 0.00061 23.6 2.5 23 48-70 102-129 (200)
71 3s7v_A Major capsid protein VP 41.9 70 0.0024 21.8 5.4 45 39-86 193-239 (277)
72 2azq_A Catechol 1,2-dioxygenas 41.4 17 0.00057 25.4 2.4 25 46-70 183-225 (311)
73 1tmx_A Hydroxyquinol 1,2-dioxy 40.9 17 0.00059 25.2 2.4 26 45-70 182-225 (293)
74 3rls_A YAF9, protein AF-9 homo 40.4 71 0.0024 20.4 5.9 43 28-72 30-72 (175)
75 3n9t_A PNPC; phospholipid bind 39.8 19 0.00063 25.0 2.4 25 46-70 180-222 (290)
76 3g9r_A Fusion complex of HIV-1 39.0 22 0.00076 17.0 1.9 12 3-14 30-41 (42)
77 2boy_A 3-chlorocatechol 1,2-di 38.4 20 0.0007 24.2 2.4 25 46-70 153-195 (254)
78 1dmh_A 1,2-CTD, catechol 1,2-d 37.7 21 0.00072 25.0 2.5 25 46-70 186-228 (311)
79 1sid_A Polyomavirus coat prote 36.0 80 0.0027 22.6 5.1 44 40-86 229-274 (383)
80 3hhy_A 1,2-CTD, catechol 1,2-d 35.9 21 0.00071 24.6 2.2 25 46-70 182-224 (280)
81 2cu9_A Spcia1, histone chapero 35.4 68 0.0023 20.2 4.3 36 29-64 36-84 (161)
82 1vps_A Polyomavirus VP1 pentam 34.6 1.1E+02 0.0038 21.0 5.6 44 40-86 198-243 (289)
83 3th1_A Chlorocatechol 1,2-diox 34.4 40 0.0014 22.9 3.4 25 46-70 150-192 (260)
84 4fmh_A VP1; viral capsid prote 33.7 97 0.0033 21.3 5.1 61 18-86 182-247 (289)
85 2ecu_A Flavin reductase (HPAC) 32.9 9.3 0.00032 23.3 0.0 30 63-92 41-73 (149)
86 3qrl_A Transcription initiatio 32.3 89 0.003 19.2 5.7 43 30-74 32-77 (140)
87 3nxg_A Major capsid protein VP 31.4 76 0.0026 21.6 4.3 45 39-86 184-230 (272)
88 1sva_1 Simian virus 40; virus 30.9 70 0.0024 22.7 4.2 44 40-86 210-255 (361)
89 4dac_A Computationally designe 30.3 29 0.001 14.9 1.4 14 2-15 9-22 (28)
90 2c5k_P Vacuolar protein sortin 29.9 28 0.00097 15.1 1.3 12 4-15 13-24 (26)
91 2jrw_A Cyclic extended PEP.1; 29.8 11 0.00039 15.9 0.0 13 64-76 7-19 (26)
92 2qck_A Flavin reductase domain 29.4 14 0.00046 23.1 0.4 29 63-91 49-80 (167)
93 2r0x_A Possible flavin reducta 29.4 11 0.00038 23.1 -0.1 29 63-91 44-75 (158)
94 2ccv_A Helix pomatia agglutini 28.8 80 0.0027 18.0 3.6 24 47-71 28-51 (101)
95 4hx6_A Oxidoreductase; structu 28.8 13 0.00044 23.6 0.2 29 63-91 58-89 (185)
96 1m46_B IQ4, IQ4 motif from MYO 28.7 41 0.0014 14.1 1.7 10 3-12 10-19 (26)
97 2d37_A Hypothetical NADH-depen 28.3 22 0.00076 22.3 1.2 29 62-90 60-91 (176)
98 3rco_A Tudor domain-containing 28.1 34 0.0012 19.4 1.9 18 2-19 30-47 (89)
99 2lw9_A Unconventionnal myosin- 27.3 39 0.0013 17.0 1.8 14 3-16 8-21 (51)
100 3o5u_A Chlorocatechol 1,2-diox 26.8 46 0.0016 22.6 2.7 25 46-70 155-198 (257)
101 1yoa_A Putative flavoprotein; 24.9 12 0.00041 22.9 -0.5 29 63-91 42-73 (159)
102 3kxt_A Chromatin protein CREN7 24.9 48 0.0016 17.1 1.9 11 52-62 46-56 (56)
103 1ogy_B Diheme cytochrome C NAP 22.6 30 0.001 21.1 1.0 32 54-87 29-60 (130)
104 1usc_A Putative styrene monoox 22.2 13 0.00043 23.3 -0.8 31 62-92 45-78 (178)
105 3bnk_A Flavoredoxin; protein-F 21.9 17 0.00059 23.1 -0.2 29 63-91 43-74 (196)
106 1i0r_A Conserved hypothetical 21.8 12 0.00042 23.2 -1.0 31 63-93 38-71 (169)
107 3s93_A Tudor domain-containing 21.4 62 0.0021 18.6 2.2 18 2-19 28-45 (102)
108 3e4v_A NADH:FMN oxidoreductase 21.2 19 0.00064 22.7 -0.2 29 63-91 46-77 (186)
109 3rh7_A Hypothetical oxidoreduc 21.2 33 0.0011 23.8 1.1 29 63-91 58-89 (321)
110 2ys2_A Cytoplasmic tyrosine-pr 20.2 28 0.00096 17.6 0.4 16 72-87 13-29 (50)
111 1u9d_A Hypothetical protein VC 20.2 1.5E+02 0.0051 17.6 4.4 26 3-28 33-58 (122)
112 3cb0_A 4-hydroxyphenylacetate 20.1 19 0.00064 22.4 -0.3 29 63-91 55-86 (173)
No 1
>2fo3_A Ubiquitin-conjugating enzyme; SGC, UBC, structural genomics, structural genomics consortium, unknown function; 1.86A {Plasmodium vivax} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-43 Score=221.65 Aligned_cols=100 Identities=37% Similarity=0.737 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCC-ccccccC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINS 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i-~HPnv~~ 80 (101)
|.+||++|+++++++++.|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 7 a~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 86 (125)
T 2fo3_A 7 ANYRIQKELHNFLNNPPINCTLDVHPNNIRIWIVKYVGLENTIYANEVYKLKIIFPDDYPLKPPIVYFLQKPPKHTHVYS 86 (125)
T ss_dssp --CHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCcchhhhhheEEeCCCCCCcCCCEEEEEEEcCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|+||+++|.++|+|++||++
T Consensus 87 ~G~iCl~iL~~~W~P~~~i~~ 107 (125)
T 2fo3_A 87 NGDICLSLLGDDYNPSLSISG 107 (125)
T ss_dssp TSBBCCGGGTTTCCTTCCHHH
T ss_pred CCEEEchhcCCCCCCCCcHHH
Confidence 999999999999999999863
No 2
>4gpr_A Ubiquitin-conjugating enzyme family protein; ubiquitin conjugation, EHU ehring1, thiol esterification, ligase; 1.60A {Entamoeba histolytica}
Probab=100.00 E-value=5.5e-43 Score=225.60 Aligned_cols=101 Identities=68% Similarity=1.339 Sum_probs=97.9
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
+|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 83 (151)
T 4gpr_A 4 MAMRRIQKELREIQQDPPCNCSAGPVGDDIFHWTATITGPDDSPYQGGLFFLDVHFPVDYPFKAPRVTFMTKVYHPNINK 83 (151)
T ss_dssp HHHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCSSSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCceEEEEEEeCCCCCCcCCCEEEEEEECCCCCCCCcceeEEecCcccceECC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|++||++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~ 104 (151)
T 4gpr_A 84 NGVICLDILKDQWSPALTLSR 104 (151)
T ss_dssp TCBBCCGGGTTTCCTTCCHHH
T ss_pred CCEEEcccccCCCCCCCcHHH
Confidence 999999999999999999863
No 3
>2h2y_A Ubiquitin-conjugating enzyme; structural genomics, unknown function, structural genomics consortium, SGC; 2.80A {Plasmodium falciparum 3D7}
Probab=100.00 E-value=9.8e-43 Score=221.09 Aligned_cols=100 Identities=37% Similarity=0.738 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCC-ccccccC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKV-FHPNINS 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i-~HPnv~~ 80 (101)
|.+||++|+++++++++.|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++ |||||+.
T Consensus 21 ~~~RL~kEl~~l~~~~~~~~~~~~~~~nl~~W~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~~HPnv~~ 100 (136)
T 2h2y_A 21 ANYRIQKELNNFLKNPPINCTIDVHPSNIRIWIVQYVGLENTIYANEVYKIKIIFPDNYPLKPPIVYFLQKPPKHTHVYS 100 (136)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCeEEEeccccccccEEEEECCCCCceeCCEEEEEEEeCCCCCCCCCEEEEeCCCCCCCcCCC
Confidence 679999999999999999999999999999999999999999999999999999999999999999999996 9999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|++||++
T Consensus 101 ~G~ICl~iL~~~WsP~~ti~~ 121 (136)
T 2h2y_A 101 NGDICLSVLGDDYNPSLSISG 121 (136)
T ss_dssp TCCBCCGGGTTTCCTTCCHHH
T ss_pred CCEEECccccCCCCCCCcHHH
Confidence 999999999999999999863
No 4
>2ayv_A Ubiquitin-conjugating enzyme E2; structural genomics, structural genomics consortium, ubiquit ubiquitin-conjugating enzyme, SGC, ligase; 2.00A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-42 Score=227.27 Aligned_cols=101 Identities=79% Similarity=1.412 Sum_probs=97.8
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
+|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.
T Consensus 21 ~~~~RL~kEl~~l~~~~~~gi~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~ 100 (166)
T 2ayv_A 21 GALKRINKELNDLSKDPPTNCSAGPVGDDMFHWQATIMGPEDSPYSGGVFFLNIHFPSDYPFKPPKVNFTTKIYHPNINS 100 (166)
T ss_dssp THHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeeEEEECCCCCCcCCCEEEEEEeCCCcCCCCCceeeeccCCcCCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|++||++
T Consensus 101 ~G~ICL~iL~~~WsP~~ti~~ 121 (166)
T 2ayv_A 101 QGAICLDILKDQWSPALTISK 121 (166)
T ss_dssp TCBBCCGGGTTTCCTTCCHHH
T ss_pred CCeEEcccccccCCCCCcHHH
Confidence 999999999999999999863
No 5
>1z2u_A Ubiquitin-conjugating enzyme E2 2; PSI, secsg, proteosome pathway, structural genomics, protein structure initiative; 1.10A {Caenorhabditis elegans} SCOP: d.20.1.1 PDB: 3tgd_A 2esk_A 1ur6_A 1w4u_A 4a49_B* 4a4b_C* 4a4c_C* 3eb6_B 3l1y_A 2esp_A 2eso_A 2esq_A 3l1z_A 2oxq_A 3a33_A 4ddg_D 4ddi_D 1x23_A 3rpg_A 2fuh_A ...
Probab=100.00 E-value=7.7e-43 Score=224.68 Aligned_cols=101 Identities=78% Similarity=1.424 Sum_probs=97.6
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
+|.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~~~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (150)
T 1z2u_A 4 MALKRIQKELQDLGRDPPAQCSAGPVGDDLFHWQATIMGPPESPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 83 (150)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCcceEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCcEEEEecCcccCcCCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|+++|++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~ 104 (150)
T 1z2u_A 84 NGSICLDILRSQWSPALTISK 104 (150)
T ss_dssp TCBBCCGGGTTTCCTTCCHHH
T ss_pred CCeEeeccccCCCCCCCCHHH
Confidence 999999999999999999863
No 6
>2r0j_A Ubiquitin carrier protein; ubiquitin conjugating, malaria, ligas conjugation pathway, structural genomics, structural genomi consortium; 1.85A {Plasmodium falciparum} PDB: 3e95_A
Probab=100.00 E-value=8.4e-43 Score=224.31 Aligned_cols=100 Identities=45% Similarity=0.940 Sum_probs=96.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~ 81 (101)
+.+||++|++++++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 2 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 81 (149)
T 2r0j_A 2 IPRRITKETQNLANEPPPGIMAVPVPENYRHFNILINGPDGTPYEGGTYKLELFLPEQYPMEPPKVRFLTKIYHPNIDKL 81 (149)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEECSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEeCCcccCCCCCeeEeccCCccCCCCCC
Confidence 46999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCCCCCCccccC
Q 045947 82 GSICLDILKEQWSPALTISK 101 (101)
Q Consensus 82 G~iCl~~l~~~W~p~~~i~~ 101 (101)
|.||+++|+++|+|++||++
T Consensus 82 G~iCl~iL~~~W~p~~~i~~ 101 (149)
T 2r0j_A 82 GRICLDILKDKWSPALQIRT 101 (149)
T ss_dssp CBBCCGGGTTTCCTTSCHHH
T ss_pred CEEechhcCCCCCCCCcHHH
Confidence 99999999999999999863
No 7
>2c4o_A Ubiquitin-conjugating enzyme E2 D2; thioesterification, ligase, UBL conjugation pathway; HET: CME; 1.94A {Homo sapiens} SCOP: d.20.1.1 PDB: 2clw_A* 2c4p_A
Probab=100.00 E-value=1.5e-42 Score=226.31 Aligned_cols=101 Identities=80% Similarity=1.439 Sum_probs=97.6
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
+|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.
T Consensus 19 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegg~f~l~i~fp~~YP~~PP~v~F~T~i~HPnV~~ 98 (165)
T 2c4o_A 19 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 98 (165)
T ss_dssp HHHHHHHHHHHHHHSSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCCcceeEEEEECCCCCCccCceEEEEEECCCcCCCCCCEEEEecCCcCCcCCC
Confidence 37899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|+++|+|++||++
T Consensus 99 ~G~ICl~iL~~~W~P~~ti~~ 119 (165)
T 2c4o_A 99 NGSICLDILRSQWSPALTISK 119 (165)
T ss_dssp TCBBCCGGGTTTCCTTCCHHH
T ss_pred CCeEeehhhcCCCCCcCcHHH
Confidence 999999999999999999863
No 8
>2c2v_B Ubiquitin-conjugating enzyme E2 N; chaperone, heat-shock protein complex, E3 ligase, ubiquitiny TPR, heat-shock protein; 2.9A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.6e-43 Score=225.10 Aligned_cols=100 Identities=44% Similarity=0.853 Sum_probs=97.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~ 81 (101)
|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 6 ~~~RL~kEl~~l~~~~~~~i~~~~~~~~l~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 85 (154)
T 2c2v_B 6 LPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPEEYPMAAPKVRFMTKIYHPNVDKL 85 (154)
T ss_dssp CCHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCchheEEEEEECCCCCCcCCCeEEEEEEcCCCCCCCCCEEEeecCcccCcCccC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCCCCCCccccC
Q 045947 82 GSICLDILKEQWSPALTISK 101 (101)
Q Consensus 82 G~iCl~~l~~~W~p~~~i~~ 101 (101)
|.||+++|+++|+|+++|++
T Consensus 86 G~iCl~iL~~~W~p~~~i~~ 105 (154)
T 2c2v_B 86 GRICLDILKDKWSPALQIRT 105 (154)
T ss_dssp CBBCCHHHHTSCCTTCCHHH
T ss_pred CeEEchhccCCCCCCCcHHH
Confidence 99999999999999999863
No 9
>1fxt_A Ubiquitin-conjugating enzyme E2-24 kDa; ligase; NMR {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1fzy_A
Probab=100.00 E-value=7.9e-43 Score=224.42 Aligned_cols=101 Identities=49% Similarity=0.969 Sum_probs=97.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCC-CcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccccc
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 79 (101)
||.+||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 1 ~~~~RL~~El~~l~~~~~~~i~~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni~ 80 (149)
T 1fxt_A 1 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 80 (149)
T ss_dssp CCHHHHHHHHHHHHHCGGGCCEEEESSSSCSSEEEEEEECCSSSTTCSSEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred ChHHHHHHHHHHHHhCCCCCEEEEECCCCCceEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCCccCCCc
Confidence 6889999999999999999999999887 999999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEeccCCCCCCCCCccccC
Q 045947 80 S-NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 80 ~-~G~iCl~~l~~~W~p~~~i~~ 101 (101)
. +|.||+++|.++|+|++||++
T Consensus 81 ~~~G~iCl~iL~~~W~p~~~i~~ 103 (149)
T 1fxt_A 81 SVTGAICLDILKNAWSPVITLKS 103 (149)
T ss_dssp SSSCCBCCHHHHTSCCTTCCHHH
T ss_pred CCCCeEeCCcCCCCCCCCCcHHH
Confidence 8 999999999999999999863
No 10
>1ayz_A UBC2, ubiquitin-conjugating enzyme RAD6; ubiquitin conjugation; 2.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=2e-42 Score=226.56 Aligned_cols=100 Identities=40% Similarity=0.959 Sum_probs=97.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~ 81 (101)
|.+||++|+++|+++++.|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.+
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPNI~~~ 84 (169)
T 1ayz_A 5 ARRRLMRDFKRMKEDAPPGVSASPLPDNVMVWNAMIIGPADTPYEDGTFRLLLEFDEEYPNKPPHVKFLSEMFHPNVYAN 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCCccccceEEEECCCCCCcCCCEEEEEEECcccCCCCCCccccccCCccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCCCCCCccccC
Q 045947 82 GSICLDILKEQWSPALTISK 101 (101)
Q Consensus 82 G~iCl~~l~~~W~p~~~i~~ 101 (101)
|.||+++|+++|+|+++|++
T Consensus 85 G~ICl~iL~~~WsP~~~i~~ 104 (169)
T 1ayz_A 85 GEICLDILQNRWTPTYDVAS 104 (169)
T ss_dssp SBBCCGGGTTTCCTTCCHHH
T ss_pred CeEeehhhccCCCCcCcHHH
Confidence 99999999999999999863
No 11
>2e2c_A Ubiquitin conjugating enzyme; ubiquitin conjugation, ubiquitin carrier protein, thioester ligase; 2.00A {Spisula solidissima} SCOP: d.20.1.1
Probab=100.00 E-value=3.3e-42 Score=223.01 Aligned_cols=101 Identities=40% Similarity=0.833 Sum_probs=97.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
.|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 9 ~~~~RL~kEl~~l~~~~~~~i~~~p~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 88 (156)
T 2e2c_A 9 SVSKRLQQELRTLLMSGDPGITAFPDGDNLFKWVATLDGPKDTVYESLKYKLTLEFPSDYPYKPPVVKFTTPCWHPNVDQ 88 (156)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCCccEEEEEEECCCCCCcCCcEEEEEEECCCCCCCCCCEEEEeCCcccCCCcc
Confidence 36899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|+++|++
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~ 109 (156)
T 2e2c_A 89 SGNICLDILKENWTASYDVRT 109 (156)
T ss_dssp TCBBCCGGGTTTCCTTCCHHH
T ss_pred CceEECccccccCCCCCcHHH
Confidence 999999999999999999863
No 12
>2a7l_A Hypothetical ubiquitin-conjugating enzyme LOC55284; structural genomics consortium, (SGC), ligase; 1.82A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.7e-42 Score=219.95 Aligned_cols=99 Identities=38% Similarity=0.795 Sum_probs=94.7
Q ss_pred HHHHHHHHHHhhcCCCCCeeEE--ecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCc--cccc
Q 045947 3 SKRINKELKDLQKDPPASCSAG--PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVF--HPNI 78 (101)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~--~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~--HPnv 78 (101)
.+||++|++++++++++|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++| ||||
T Consensus 24 ~~RL~kEl~~l~~~~~~gi~v~~~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~~~HPNV 103 (136)
T 2a7l_A 24 QKRLQKELLALQNDPPPGMTLNEKSVQNSITQWIVDMEGAPGTLYEGEKFQLLFKFSSRYPFDSPQVMFTGENIPVHPHV 103 (136)
T ss_dssp CHHHHHHHHHHHHSCCTTCCCCTTCCCCSCEEEEEEEECCTTSTTTTCEEEEEEEECTTTTTSCCEEEEESSCCCCBTTB
T ss_pred HHHHHHHHHHHHhCCCCCEEEEEeeCccccceeEEEEECCCCCccccEEEEEEEECCCCCCCCCCEEEEeCCCcCCCccC
Confidence 4999999999999999999865 78899999999999999999999999999999999999999999999999 9999
Q ss_pred cCCCcEeccCCCCCCCCCccccC
Q 045947 79 NSNGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 79 ~~~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+.+|+||+++|+++|+|++||++
T Consensus 104 ~~~G~ICL~iL~~~WsP~~ti~~ 126 (136)
T 2a7l_A 104 YSNGHICLSILTEDWSPALSVQS 126 (136)
T ss_dssp CTTCBBCCGGGTTTCCTTSCHHH
T ss_pred CCCCeEEchhcCCCCCCCCcHHH
Confidence 99999999999999999999863
No 13
>1jat_A Ubiquitin-conjugating enzyme E2-17.5 kDa; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 1jbb_A 2gmi_A 3hct_B 3hcu_B 4dhi_D 1j7d_B 4dhj_C 4dhz_F
Probab=100.00 E-value=2e-42 Score=223.78 Aligned_cols=101 Identities=47% Similarity=0.850 Sum_probs=97.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
+|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 ~~~~RL~kE~~~l~~~~~~~i~~~~~~~~l~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 84 (155)
T 1jat_A 5 SLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPDDYPMEAPKVRFLTKIYHPNIDR 84 (155)
T ss_dssp SCCHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTEEEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCchhEEEEEEECCCCCCccCcEEEEEEEcCCCCCCCCCcceeecccccCCCCC
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|+++|++
T Consensus 85 ~G~iCl~iL~~~W~p~~~i~~ 105 (155)
T 1jat_A 85 LGRICLDVLKTNWSPALQIRT 105 (155)
T ss_dssp TCCBCCGGGTTTCCTTCCHHH
T ss_pred CCEEEchhhccCCCCCCCHHH
Confidence 999999999999999999863
No 14
>1zdn_A Ubiquitin-conjugating enzyme E2S; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC; 1.93A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=3e-42 Score=223.61 Aligned_cols=99 Identities=39% Similarity=0.790 Sum_probs=96.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~ 81 (101)
|.+||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 14 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 93 (158)
T 1zdn_A 14 IIRLVYKEVTTLTADPPDGIKVFPNEEDLTDLQVTIEGPEGTPYAGGLFRMKLLLGKDFPASPPKGYFLTKIFHPNVGAN 93 (158)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCChhheeEEEECCCCCCccCcEEEEEEEcCCCCCCCCCEEEeccCcccCCCCCC
Confidence 57999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCCCCCCcccc
Q 045947 82 GSICLDILKEQWSPALTIS 100 (101)
Q Consensus 82 G~iCl~~l~~~W~p~~~i~ 100 (101)
|.||+++|.++|+|+++|+
T Consensus 94 G~iCl~iL~~~W~p~~~i~ 112 (158)
T 1zdn_A 94 GEICVNVLKRDWTAELGIR 112 (158)
T ss_dssp SBBCHHHHTTTCCTTCCHH
T ss_pred CEEehhhcCCCCCCCCcHH
Confidence 9999999999999999986
No 15
>2aak_A UBC1, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase; 2.40A {Arabidopsis thaliana} SCOP: d.20.1.1 PDB: 1jas_A 2y4w_A 2yb6_A 2ybf_A 1q34_A 1z3d_A
Probab=100.00 E-value=5e-42 Score=221.30 Aligned_cols=100 Identities=49% Similarity=1.021 Sum_probs=96.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~ 81 (101)
|.+||++|++++++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.+
T Consensus 5 a~~RL~~E~~~l~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~~ 84 (152)
T 2aak_A 5 ARKRLMRDFKRLQQDPPAGISGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFSEDYPNKPPTVRFVSRMFHPNIYAD 84 (152)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCccEEEEEEeCCCCCCccCCEEEEEEECCCCCCCCCCEEEEecCcccCCCCCC
Confidence 68999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCCCCCCccccC
Q 045947 82 GSICLDILKEQWSPALTISK 101 (101)
Q Consensus 82 G~iCl~~l~~~W~p~~~i~~ 101 (101)
|.||+++|.++|+|+++|++
T Consensus 85 G~iCl~iL~~~W~p~~~i~~ 104 (152)
T 2aak_A 85 GSICLDILQNQWSPIYDVAA 104 (152)
T ss_dssp SBBCCGGGTTSCCTTCCHHH
T ss_pred CEEechhhcCCCCCCCcHHH
Confidence 99999999999999999863
No 16
>3h8k_A Ubiquitin-conjugating enzyme E2 G2; alpha beta, all alpha, ligase, UBL conjugation pathway, endo reticulum, membrane, metal-binding; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 3fsh_A 2cyx_A 2kly_A
Probab=100.00 E-value=8.3e-42 Score=222.60 Aligned_cols=100 Identities=46% Similarity=0.955 Sum_probs=96.1
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCC-CcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVAD-DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~-~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
|.|||++|+++++++++.|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 4 a~~RL~kEl~~l~~~~~~gi~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNV~~ 83 (164)
T 3h8k_A 4 ALKRLMAEYKQLTLNPPEGIVAGPMNEENFFEWEALIMGPEDTCFEFGVFPAILSFPLDYPLSPPKMRFTCEMFHPNIYP 83 (164)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEeCCCCCCCCCCEEEEEEECCCCCCCCCCEEEEcCCCccCCCCC
Confidence 789999999999999999999998876 9999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCC-------------CCCCCCccccC
Q 045947 81 NGSICLDILK-------------EQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~-------------~~W~p~~~i~~ 101 (101)
+|.||+++|. ++|+|++||++
T Consensus 84 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~ti~~ 117 (164)
T 3h8k_A 84 DGRVCISILHAPGDDPMGYESSAERWSPVQSVEK 117 (164)
T ss_dssp TSBBCCGGGSCSCSCCCSCCTTCCCCCTTCCHHH
T ss_pred CCcEeeecccCcccccccccccccCCCCCCcHHH
Confidence 9999999997 78999999863
No 17
>1yh2_A HSPC150 protein similar to ubiquitin-conjugating enzyme; structural genomics consortium, HSCP150, ligase, SGC; 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.1e-41 Score=222.93 Aligned_cols=100 Identities=39% Similarity=0.836 Sum_probs=96.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~ 81 (101)
|.+||++|+++++++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.+
T Consensus 5 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~l~~w~~~I~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~~ 84 (169)
T 1yh2_A 5 RASRLKRELHMLATEPPPGITCWQDKDQMDDLRAQILGGANTPYEKGVFKLEVIIPERYPFEPPQIRFLTPIYHPNIDSA 84 (169)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEEeCCCCCCCCcEEEeecCCccccCCcC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCC----CCCCCCccccC
Q 045947 82 GSICLDILK----EQWSPALTISK 101 (101)
Q Consensus 82 G~iCl~~l~----~~W~p~~~i~~ 101 (101)
|.||+|+|+ ++|+|++||++
T Consensus 85 G~iCl~iL~~~~~~~W~p~~~i~~ 108 (169)
T 1yh2_A 85 GRICLDVLKLPPKGAWRPSLNIAT 108 (169)
T ss_dssp CBBCCGGGSCTTTSCCCTTSCHHH
T ss_pred CeEecccccCCcccCCCCCCcHHH
Confidence 999999998 89999999863
No 18
>2ucz_A UBC7, ubiquitin conjugating enzyme; ubiquitin conjugation, ligase, yeast; 2.93A {Saccharomyces cerevisiae} SCOP: d.20.1.1
Probab=100.00 E-value=1.3e-41 Score=221.92 Aligned_cols=100 Identities=47% Similarity=1.003 Sum_probs=95.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecC-CCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVA-DDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
|.+||++|+++|++++++|+++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 5 a~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i~GP~~tpYegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPNv~~ 84 (165)
T 2ucz_A 5 AQKRLLKELQQLIKDSPPGIVAGPKSENNIFIWDCLIQGPPDTPYADGVFNAKLEFPKDYPLSPPKLTFTPSILHPNIYP 84 (165)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSSCCSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCSCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEECCCCCccEEEEEEECCCCCCccCcEEEEEEECCccCCCCCCEEEEeCCCccCCCCC
Confidence 78999999999999999999999876 69999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCC-------------CCCCCCCccccC
Q 045947 81 NGSICLDIL-------------KEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l-------------~~~W~p~~~i~~ 101 (101)
+|.||+++| .++|+|++||++
T Consensus 85 ~G~iCl~iL~~~~~~~~~~~~~~~~W~p~~~i~~ 118 (165)
T 2ucz_A 85 NGEVCISILHSPGDDPNMYELAEERWSPVQSVEK 118 (165)
T ss_dssp TSBBCCGGGSCCCSCTTSTTTTTTSCCTTCCHHH
T ss_pred CCcEeehhhCCccccccccCCCCCCCCCcCcHHH
Confidence 999999999 688999999863
No 19
>1i7k_A Ubiquitin-conjugating enzyme E2 H10; ligase; 1.95A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=5.3e-42 Score=226.19 Aligned_cols=101 Identities=36% Similarity=0.706 Sum_probs=97.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
.|.+||++|+++|+++++.||++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.
T Consensus 30 ~~~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~ 109 (179)
T 1i7k_A 30 PVGKRLQQELMTLMMSGDKGISAFPESDNLFKWVGTIHGAAGTVYEDLRYKLSLEFPSGYPYNAPTVKFLTPCYHPNVDT 109 (179)
T ss_dssp CHHHHHHHHHHHHHHHCCTTEEEEEETTEEEEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEESSCCCSTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcccccEEEEECCCCCCcCCCEEEEEEECCCcCCCCCceEEEecCCccCcccc
Confidence 36799999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|+++|++
T Consensus 110 ~G~ICL~iL~~~WsP~~ti~~ 130 (179)
T 1i7k_A 110 QGNISLDILKEKWSALYDVRT 130 (179)
T ss_dssp TCBBCCGGGTTTCCTTCCHHH
T ss_pred CCeEEcccCcCcCCCCCCHHH
Confidence 999999999999999999863
No 20
>3rcz_B SUMO-conjugating enzyme UBC9; SUMO-like domain, protein:protein interaction, protein ligase complex; HET: DNA; 1.90A {Schizosaccharomyces pombe} SCOP: d.20.1.1
Probab=100.00 E-value=1.8e-41 Score=220.88 Aligned_cols=100 Identities=36% Similarity=0.864 Sum_probs=95.5
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCC-----CcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccc
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVAD-----DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HP 76 (101)
|.+||++|++++++++++|+++.+.++ |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||
T Consensus 11 ~~~RL~kEl~~l~~~~p~gi~~~p~~~~d~~~nl~~W~~~I~Gp~~Tpyegg~f~l~i~fp~~YP~~pP~v~F~t~i~HP 90 (163)
T 3rcz_B 11 CKTRLQEERKQWRRDHPFGFYAKPCKSSDGGLDLMNWKVGIPGKPKTSWEGGLYKLTMAFPEEYPTRPPKCRFTPPLFHP 90 (163)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSSEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEccCcCCCCCccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCEEEEeCCCccC
Confidence 789999999999999999999998876 899999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEeccCCCCC--CCCCccccC
Q 045947 77 NINSNGSICLDILKEQ--WSPALTISK 101 (101)
Q Consensus 77 nv~~~G~iCl~~l~~~--W~p~~~i~~ 101 (101)
||+.+|.||+++|.+. |+|++||++
T Consensus 91 nV~~~G~iCl~iL~~~~~W~p~~ti~~ 117 (163)
T 3rcz_B 91 NVYPSGTVCLSILNEEEGWKPAITIKQ 117 (163)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHH
T ss_pred CCCCCCcEeccccCCCCCcCCcCcHHH
Confidence 9999999999999754 999999863
No 21
>3bzh_A Ubiquitin-conjugating enzyme E2 E1; structural genomics consortium, ubiquitin-conjuga enzyme, ligase, SGC, UBL conjugation pathway; 1.60A {Homo sapiens} PDB: 1y6l_A
Probab=100.00 E-value=3.4e-41 Score=224.74 Aligned_cols=99 Identities=62% Similarity=1.227 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSN 81 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~ 81 (101)
|.+||++|+++|+++++.||.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.+
T Consensus 49 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV~~~ 128 (194)
T 3bzh_A 49 SAKRIQKELADITLDPPPNCSAGPKGDNIYEWRSTILGPPGSVYEGGVFFLDITFTPEYPFKPPKVTFRTRIYHCNINSQ 128 (194)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEESSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCceeecccCccccceEEEeCCCCCCccCCEEEEEEECCCcCCCCCccccccCCCccceECCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcEeccCCCCCCCCCcccc
Q 045947 82 GSICLDILKEQWSPALTIS 100 (101)
Q Consensus 82 G~iCl~~l~~~W~p~~~i~ 100 (101)
|.||+++|.++|+|+++|+
T Consensus 129 G~ICL~iL~~~WsP~~ti~ 147 (194)
T 3bzh_A 129 GVICLDILKDNWSPALTIS 147 (194)
T ss_dssp CBBCCGGGTTTCCTTCCHH
T ss_pred CceechhhhccCCCcCcHH
Confidence 9999999999999999986
No 22
>2awf_A Ubiquitin-conjugating enzyme E2 G1; ligase, UBL conjugation pathway, structural genomics, structural genomics consortium SGC; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1pzv_A
Probab=100.00 E-value=4e-41 Score=220.90 Aligned_cols=101 Identities=40% Similarity=0.935 Sum_probs=95.8
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecC-CCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccccc
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVA-DDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~-~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 79 (101)
.|.+||++|+++|+++++.||++.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 17 ~~~~rL~kEl~~l~~~~~~gi~~~p~~~~nl~~W~~~I~GP~~TpYegG~f~~~i~fp~~YP~~PP~v~F~T~i~HPNV~ 96 (172)
T 2awf_A 17 RGSLLLRRQLAELNKNPVEGFSAGLIDDNDLYRWEVLIIGPPDTLYEGGVFKAHLTFPKDYPLRPPKMKFITEIWHPNVD 96 (172)
T ss_dssp TTHHHHHHHHHHHHHSCCTTEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSCCCCTTBC
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCcEEEEEEECCcccCCCCCcccccCCCccCCCC
Confidence 378999999999999999999999876 6999999999999999999999999999999999999999999999999999
Q ss_pred CCCcEeccCCC-------------CCCCCCccccC
Q 045947 80 SNGSICLDILK-------------EQWSPALTISK 101 (101)
Q Consensus 80 ~~G~iCl~~l~-------------~~W~p~~~i~~ 101 (101)
.+|.||+++|. ++|+|+++|++
T Consensus 97 ~~G~IClsiL~~~~~d~~~~~~~~~~WsP~~ti~~ 131 (172)
T 2awf_A 97 KNGDVCISILHEPGEDKYGYEKPEERWLPIHTVET 131 (172)
T ss_dssp TTCBBCCGGGSCC---------CTTSCCTTCCHHH
T ss_pred CCCcEehhhcCCcccccccccccCCCCCCcCcHHH
Confidence 99999999996 68999999863
No 23
>3rz3_A Ubiquitin-conjugating enzyme E2 R1; ubiquitin conjugating enzyme domain, E2 domain, ligase-ligas inhibitor complex; HET: U94; 2.30A {Homo sapiens} PDB: 2ob4_A
Probab=100.00 E-value=6.8e-41 Score=221.63 Aligned_cols=100 Identities=36% Similarity=0.837 Sum_probs=94.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEE-ecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 2 ASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
|.|||++|+++|+++++.|+++. +.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 8 a~kRL~kEl~~l~~~~~~gi~~~~~~~~nl~~W~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~~ 87 (183)
T 3rz3_A 8 SQKALLLELKGLQEEPVEGFRVTLVDEGDLYNWEVAIFGPPNTYYEGGYFKARLKFPIDYPYSPPAFRFLTKMWHPNIYE 87 (183)
T ss_dssp HHHHHHHHHHHHHHSCCTTEEEEECTTCCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEecCccchhheeeeeeCCCCCCCCCCeEEEEEECCCCCCCCCCeeEecCCCccCCCCC
Confidence 68999999999999999999998 66789999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCC-------------CCCCCCccccC
Q 045947 81 NGSICLDILK-------------EQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~-------------~~W~p~~~i~~ 101 (101)
+|.||+++|. ++|+|++||++
T Consensus 88 ~G~iClsiL~~~~~~~~~~~~~~~~W~p~~~i~~ 121 (183)
T 3rz3_A 88 TGDVCISILHPPVDDPQSGELPSERWNPTQNVRT 121 (183)
T ss_dssp TSBBCCTTC--------------CCCCTTCCHHH
T ss_pred CCcEehhhcCcccccccccccccCCCCCcCcHHH
Confidence 9999999996 78999999863
No 24
>2f4z_A Tgtwinscan_2721 - E2 domain; ubiquitin conjugating tgtwinscan_2721, structural genomics, structural genomics consortium, SGC; 2.11A {Toxoplasma gondii} SCOP: d.20.1.1
Probab=100.00 E-value=4.9e-41 Score=223.74 Aligned_cols=101 Identities=49% Similarity=0.927 Sum_probs=93.9
Q ss_pred ChHHHHHHHHHHhhcCCC-------------CCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeE
Q 045947 1 MASKRINKELKDLQKDPP-------------ASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKV 67 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~-------------~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v 67 (101)
+|.+||++|+++|+++++ .|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|
T Consensus 32 ~a~~RL~kEl~~l~k~~~~~~~~p~~~~~~~~gi~v~~~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V 111 (193)
T 2f4z_A 32 REQARLLKELADIQQLQRAHDSEPAATHSTSHGVSAQIVGGDIHRWRGFIAGPLGTPYEGGHFTLDIVIPPDYPYNPPKM 111 (193)
T ss_dssp CHHHHHHHHHHHHHHC----------------CEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHHhCCCccccccccccCCCCcEEEEEcCCCcceEEEEEeCCCCCCcCCCEEEEEEECCCcCCCCCCeE
Confidence 367999999999999876 7999999999999999999999999999999999999999999999999
Q ss_pred EEecCCcccccc-CCCcEeccCCCCCCCCCccccC
Q 045947 68 AFRTKVFHPNIN-SNGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 68 ~f~t~i~HPnv~-~~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.|+||||||+ .+|.||+++|.++|+|++||++
T Consensus 112 ~F~T~i~HPNI~~~~G~ICL~iL~~~WsP~~ti~~ 146 (193)
T 2f4z_A 112 KFVTKIWHPNISSQTGAICLDILKHEWSPALTIRT 146 (193)
T ss_dssp EESSCCCBTTBCTTTCBBCCGGGTTTCCTTSCHHH
T ss_pred EEecCCccCCCcCCCCEEECccccccCCCCCCHHH
Confidence 999999999999 6999999999999999999863
No 25
>1yrv_A Ubiquitin-conjugating ligase MGC351130; structural genomics consortium, SGC, ubiquitin- conjugating enzyme; 2.18A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=2.2e-41 Score=221.59 Aligned_cols=100 Identities=36% Similarity=0.731 Sum_probs=96.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccc-cC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNI-NS 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv-~~ 80 (101)
|.+||++|+++|++++++|+.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||| +.
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNI~~~ 103 (169)
T 1yrv_A 24 AYLLLHRDFCDLKENNYKGITAKPVSEDMMEWEVEIEGLQNSVWQGLVFQLTIHFTSEYNYAPPVVKFITIPFHPNVDPH 103 (169)
T ss_dssp HHHHHHHHHHHHHHHCCTTEEEEECSTTSCEEEEEEECCTTSTTTTCEEEEEEECCTTBTTBCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccccceeEEECCCCCCccceEEEEEEECCccCCCCCCcceecCCCccCcccCC
Confidence 67999999999999999999999999999999999999999999999999999999999999999999999999999 79
Q ss_pred CCcEeccCCC--CCCCCCccccC
Q 045947 81 NGSICLDILK--EQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~--~~W~p~~~i~~ 101 (101)
+|.||+++|+ ++|+|++||++
T Consensus 104 ~G~ICL~iL~~~~~WsP~~ti~~ 126 (169)
T 1yrv_A 104 TGQPCIDFLDNPEKWNTNYTLSS 126 (169)
T ss_dssp TCCBCCHHHHCGGGCCTTCCHHH
T ss_pred CCeEeehhhcCCcCCCCcCCHHH
Confidence 9999999998 89999999863
No 26
>2pwq_A Ubiquitin conjugating enzyme; structural genomics consortium, SGC, ligase; 1.90A {Plasmodium yoelii}
Probab=100.00 E-value=2.7e-41 Score=228.27 Aligned_cols=100 Identities=45% Similarity=0.926 Sum_probs=96.6
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccccc-C
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~-~ 80 (101)
|.+||++|+++|+++++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+ .
T Consensus 24 a~~RL~kEl~~l~~~~~~gi~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~~~ 103 (216)
T 2pwq_A 24 ELLRLQKELKDIENENVQEIDAHIKDSNFFEWVGFIKGPEGTPYEGGHFTLAITIPNDYPYNPPKIKFVTKIWHPNISSQ 103 (216)
T ss_dssp HHHHHHHHHHHHHHSCTTTEEEEECSSCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCccceEEEEEEECCCcCCCCCCcccccCCCcCCCCcCC
Confidence 689999999999999999999999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|+++|+|++||++
T Consensus 104 ~G~ICL~iL~~~WsP~~ti~~ 124 (216)
T 2pwq_A 104 TGAICLDVLKNEWSPALTIRT 124 (216)
T ss_dssp TCBBCCHHHHHHCCTTCCHHH
T ss_pred CCEEEchhhcccCCCCCcHHH
Confidence 999999999999999999863
No 27
>2bep_A Ubiquitin-conjugating enzyme E2-25 kDa; ligase, E2 conjugating enzyme, protein degradatio structural proteomics in europe, spine; 1.8A {Bos taurus} SCOP: d.20.1.1 PDB: 2bf8_A
Probab=100.00 E-value=8.3e-41 Score=216.98 Aligned_cols=100 Identities=42% Similarity=0.866 Sum_probs=95.2
Q ss_pred hHHHHHHHHHHhhcC---CCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccc
Q 045947 2 ASKRINKELKDLQKD---PPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNI 78 (101)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv 78 (101)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 9 a~~RL~kEl~~l~~~~~~~~~~i~~~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPni 88 (159)
T 2bep_A 9 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 88 (159)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSSSSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhcCCCCCCCEEEEeCCCchheEEEEEECCCCCCccCCEEEEEEeCCCcCCCCCCEEEeeCCCCccCC
Confidence 689999999999985 57899999999999999999999999999999999999999999999999999999999999
Q ss_pred c-CCCcEeccCCCCCCCCCccccC
Q 045947 79 N-SNGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 79 ~-~~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+ .+|.||+++|.++|+|++||++
T Consensus 89 ~~~~G~iCl~iL~~~W~p~~~i~~ 112 (159)
T 2bep_A 89 SSVTGAICLDILKDQWAAAMTLRT 112 (159)
T ss_dssp CTTTCBBCCGGGTTTCCTTCCHHH
T ss_pred CCCCCEEeChhhhccCCCCCcHHH
Confidence 9 5999999999999999999863
No 28
>3k9o_A Ubiquitin-conjugating enzyme E2 K; E2-25K, complex structure, ATP-binding, isopeptide BO ligase, nucleotide-binding, UBL conjugation pathway; 1.80A {Homo sapiens} PDB: 3k9p_A 1yla_A 2o25_A
Probab=100.00 E-value=1.4e-40 Score=222.81 Aligned_cols=101 Identities=42% Similarity=0.866 Sum_probs=95.9
Q ss_pred ChHHHHHHHHHHhhcC---CCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccc
Q 045947 1 MASKRINKELKDLQKD---PPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPn 77 (101)
+|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 5 ~a~~Rl~kEl~~l~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPn 84 (201)
T 3k9o_A 5 IAVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPN 84 (201)
T ss_dssp TTHHHHHHHHHHHHTCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTT
T ss_pred HHHHHHHHHHHHHHhCCCCCCCCEEEEECCCCccEEEEEEECCCCCCCCCCEEEEEEECCCcCCCCCCccccccCcccCC
Confidence 4789999999999987 3689999999999999999999999999999999999999999999999999999999999
Q ss_pred cc-CCCcEeccCCCCCCCCCccccC
Q 045947 78 IN-SNGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 78 v~-~~G~iCl~~l~~~W~p~~~i~~ 101 (101)
|+ .+|.||+++|.++|+|++||++
T Consensus 85 v~~~~G~iCl~iL~~~W~p~~~i~~ 109 (201)
T 3k9o_A 85 ISSVTGAICLDILKDQWAAAMTLRT 109 (201)
T ss_dssp BCTTTCBBCCGGGTTTCCTTCCHHH
T ss_pred CcCCCCeeeCcccccCCCCCCCHHH
Confidence 99 5999999999999999999863
No 29
>2gjd_A Ubiquitin-conjugating enzyme E2-18 kDa; UBC9P, SMT3, crystallography, ligase; 1.75A {Saccharomyces cerevisiae} PDB: 2eke_A 3ong_B
Probab=100.00 E-value=1e-40 Score=216.15 Aligned_cols=100 Identities=41% Similarity=0.855 Sum_probs=94.8
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecC-----CCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccc
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVA-----DDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HP 76 (101)
|.+||++|+++++++++.|+.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 5 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 84 (157)
T 2gjd_A 5 CLQRLQEERKKWRKDHPFGFYAKPVKKADGSMDLQKWEAGIPGKEGTNWAGGVYPITVEYPNEYPSKPPKVKFPAGFYHP 84 (157)
T ss_dssp HHHHHHHHHHHHHHCCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTBEEEEEEECCTTTTTSCCEEECCTTCCCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCcccEEEEEEECCCCCCcCCeEEEEEEEcCCCCCCCCCeeeccCCCccC
Confidence 68999999999999999999998875 4899999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEeccCCCC--CCCCCccccC
Q 045947 77 NINSNGSICLDILKE--QWSPALTISK 101 (101)
Q Consensus 77 nv~~~G~iCl~~l~~--~W~p~~~i~~ 101 (101)
||+.+|.||+++|.+ +|+|+++|++
T Consensus 85 nv~~~G~iCl~iL~~~~~W~p~~~i~~ 111 (157)
T 2gjd_A 85 NVYPSGTICLSILNEDQDWRPAITLKQ 111 (157)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHH
T ss_pred CCCCCCcEeeecccCCCCCCCCCcHHH
Confidence 999999999999987 7999999863
No 30
>1wzv_A Ubiquitin-conjugating enzyme E2 L6; ligase; 2.10A {Homo sapiens} SCOP: d.20.1.1 PDB: 1wzw_A 2kjh_A
Probab=100.00 E-value=1.3e-40 Score=215.22 Aligned_cols=100 Identities=43% Similarity=0.912 Sum_probs=95.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeE-EecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccccc
Q 045947 1 MASKRINKELKDLQKDPPASCSA-GPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~-~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 79 (101)
+|.+||++|+++|+++++.|+.+ .+.++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 4 ~~~~RL~kEl~~l~~~~~~~i~~~~~~~~~l~~w~~~I~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnV~ 82 (155)
T 1wzv_A 4 MASMRVVKELEDLQKKPPPYLRNLSSDDANVLVWHALLL-PDQPPYHLKAFNLRISFPPEYPFKPPMIKFTTKIYHPNVD 82 (155)
T ss_dssp -CHHHHHHHHHHHHHSCCTTEEEEEECSSCTTEEEEEEC-CCSTTGGGEEEEEEEECCTTTTSSCCEEEESSCCCBTTBC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEecCCCchheEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCCcceeeCCCccCcCC
Confidence 37899999999999999999999 788899999999999 9999999999999999999999999999999999999999
Q ss_pred CCCcEeccCC-CCCCCCCccccC
Q 045947 80 SNGSICLDIL-KEQWSPALTISK 101 (101)
Q Consensus 80 ~~G~iCl~~l-~~~W~p~~~i~~ 101 (101)
.+|.||+++| .++|+|+++|++
T Consensus 83 ~~G~iCl~iL~~~~W~p~~~i~~ 105 (155)
T 1wzv_A 83 ENGQICLPIISSENWKPCTKTCQ 105 (155)
T ss_dssp TTCBCCCGGGCTTTCCTTCCHHH
T ss_pred CCCeEeecCCCccCCCCCCcHHH
Confidence 9999999999 899999999863
No 31
>2grr_A Ubiquitin-conjugating enzyme E2 I; ubiquitin, conjugation, small ubiquitin like modifer, SMT3, ligase; 1.30A {Homo sapiens} PDB: 2grq_A 2grn_A 2pe6_A 2gro_A 2grp_A 1u9a_A 1u9b_A 2vrr_A 2px9_B 1z5s_A 2xwu_A 3uin_A 3uio_A 3uip_A* 1kps_A 2o25_C 1a3s_A 3a4s_A 2uyz_A
Probab=100.00 E-value=3e-40 Score=214.73 Aligned_cols=100 Identities=39% Similarity=0.828 Sum_probs=94.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecC-----CCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccc
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVA-----DDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHP 76 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~-----~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HP 76 (101)
|.+||++|+++|+++++.|+.+.+.+ +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||
T Consensus 8 a~~RL~kE~~~l~~~~~~g~~~~p~~~~~~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HP 87 (161)
T 2grr_A 8 ALSRLAQERKAWRKDHPFGFVAVPTKNPDGTMNLMNWECAIPGKKGTPWEGGLFKLRMLFKDDYPSSPPKCKFEPPLFHP 87 (161)
T ss_dssp HHHHHHHHHHHHHHSCCTTCEEEEEECTTSCEEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCST
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeccccCCCCCccEEEEEEECCCCCCccCCEEEEEEEcCcccCCCCCEEEEecCcccC
Confidence 67999999999999999999998763 5899999999999999999999999999999999999999999999999
Q ss_pred cccCCCcEeccCCCC--CCCCCccccC
Q 045947 77 NINSNGSICLDILKE--QWSPALTISK 101 (101)
Q Consensus 77 nv~~~G~iCl~~l~~--~W~p~~~i~~ 101 (101)
||+.+|.||+++|.+ +|+|+++|++
T Consensus 88 nv~~~G~iCl~iL~~~~~W~p~~~i~~ 114 (161)
T 2grr_A 88 NVYPSGTVCLSILEEDKDWRPAITIKQ 114 (161)
T ss_dssp TBCTTSBBCCGGGCTTTTCCTTCCHHH
T ss_pred CCCCCCeEeehhcCCCCCcCCCCcHHH
Confidence 999999999999976 7999999863
No 32
>2a4d_A Ubiquitin-conjugating enzyme E2 variant 1; alternative splicing, nuclear protein, UBL conjugation pathway,ubiquitin, ligase, structural genomics; 1.69A {Homo sapiens} SCOP: d.20.1.1 PDB: 2c2v_C 1j7d_A 1j74_A 1zgu_A
Probab=100.00 E-value=7.3e-40 Score=212.57 Aligned_cols=100 Identities=28% Similarity=0.503 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHhhcCCCCC-eeEEec-CCC--cceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccc
Q 045947 2 ASKRINKELKDLQKDPPAS-CSAGPV-ADD--MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-~~~~~~-~~~--~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPn 77 (101)
|.+||++|++++++++++| +++.+. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 26 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~~l~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 105 (160)
T 2a4d_A 26 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 105 (160)
T ss_dssp HHHHHHHHHHHHHSCCTTSSEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCCccccceeeEEEEECCCCCCccCeEEEEEEECCCcCCCCCcEEEEecCceeCC
Confidence 5789999999999998888 777774 444 899999999999999999999999999999999999999999999999
Q ss_pred cc-CCCcEeccCCC--CCCCCCccccC
Q 045947 78 IN-SNGSICLDILK--EQWSPALTISK 101 (101)
Q Consensus 78 v~-~~G~iCl~~l~--~~W~p~~~i~~ 101 (101)
|+ .+|+||+++|. ++|+|++||++
T Consensus 106 V~~~~G~ICl~iL~~~~~WsP~~ti~~ 132 (160)
T 2a4d_A 106 VNSSNGVVDPRAISVLAKWQNSYSIKV 132 (160)
T ss_dssp BCTTTCBBCGGGSHHHHTCCTTCCHHH
T ss_pred EECCCCEEehhhcCCccCCCccCcHHH
Confidence 99 69999999998 89999999863
No 33
>1tte_A Ubiquitin-conjugating enzyme E2-24 kDa; UBC1, ubiquitin-dependent degradation, ligase; NMR {Saccharomyces cerevisiae} SCOP: a.5.2.1 d.20.1.1
Probab=100.00 E-value=7e-41 Score=226.08 Aligned_cols=101 Identities=47% Similarity=0.953 Sum_probs=95.8
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCCC-cceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccccc
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVADD-MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~~-~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 79 (101)
+|.+||++|++++++++++|+++.+.++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~gi~~~p~~~~~l~~w~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~V~F~T~i~HPNI~ 81 (215)
T 1tte_A 2 SRAKRIMKEIQAVKDDPAAHITLEFVSESDIHHLKGTFLGPPGTPYEGGKFVVDIEVPMEYPFKPPKMQFDTKVYHPNIS 81 (215)
T ss_dssp TTHHHHHHHHHHHHTTTCTTCEECCCSSSSCCEEEEECCEEEEETTEEECCEEEEECCSCSSSCCCEEEETTTCCCSSSC
T ss_pred hHHHHHHHHHHHHHhCCCCCEEEEECCCccccccEEEEeCCCCCCcCCCEEEEEEeCCccCCCCCCcccccCCCccCcCc
Confidence 47899999999999999999999998775 56999999999999999999999999999999999999999999999999
Q ss_pred C-CCcEeccCCCCCCCCCccccC
Q 045947 80 S-NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 80 ~-~G~iCl~~l~~~W~p~~~i~~ 101 (101)
. +|.||+++|+++|+|++||++
T Consensus 82 ~~~G~ICL~iL~~~WsP~~ti~~ 104 (215)
T 1tte_A 82 SVTGAICLDILRNAWSPVITLKS 104 (215)
T ss_dssp SSSSCCCSSTTTCCSCTTCCHHH
T ss_pred CCCCEEECccCCCCCCCcCcHHH
Confidence 8 999999999999999999863
No 34
>1y8x_A Ubiquitin-conjugating enzyme E2 M; ubiquitin-conjugating enzyme E2 M, ligase; 2.40A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=7.1e-40 Score=212.81 Aligned_cols=97 Identities=38% Similarity=0.823 Sum_probs=92.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEE-ecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 2 ASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
|.+||++|++++ ++++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 7 ~~~RL~kEl~~l--~~~~~~~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~~ 83 (160)
T 1y8x_A 7 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 83 (160)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCSSSTTTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEeccCCccceEEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCEEEEecCCccCcCCC
Confidence 789999999999 467899998 7888999999998 999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|+++|++
T Consensus 84 ~G~iCl~iL~~~W~p~~~i~~ 104 (160)
T 1y8x_A 84 EGNVCLNILREDWKPVLTINS 104 (160)
T ss_dssp TCBBCCGGGTTTCCTTCCHHH
T ss_pred CCeEEcccchhhccCCCCHHH
Confidence 999999999999999999863
No 35
>3e46_A Ubiquitin-conjugating enzyme E2-25 kDa; huntington interacting, ligase, alternative splicing, cytoplasm, UBL conjugation, UBL conjugation pathway; 1.86A {Homo sapiens} SCOP: a.5.2.1 d.20.1.1 PDB: 3f92_A*
Probab=100.00 E-value=2.3e-39 Score=223.01 Aligned_cols=100 Identities=42% Similarity=0.866 Sum_probs=95.4
Q ss_pred hHHHHHHHHHHhhcC---CCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccc
Q 045947 2 ASKRINKELKDLQKD---PPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNI 78 (101)
Q Consensus 2 a~~RL~~E~~~l~~~---~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv 78 (101)
|.+||++|+++|+++ ++.|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||
T Consensus 58 a~~RL~kEl~~l~~~~~~~~~gi~v~p~~dnl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~V~F~T~i~HPNV 137 (253)
T 3e46_A 58 AVQRIKREFKEVLKSEETSKNQIKVDLVDENFTELRGEIAGPPDTPYEGGRYQLEIKIPETYPFNPPKVRFITKIWHPNI 137 (253)
T ss_dssp HHHHHHHHHHHHHHCHHHHTTSEEEEECSTTSSEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEESSCCCBTTB
T ss_pred HHHHHHHHHHHHHhCCCCCCCCEEEEECCCcccEEEEEEECCCCCCcCCCEEEEEEECCCCCCCCCCeeeecCCCccCCc
Confidence 689999999999987 47899999999999999999999999999999999999999999999999999999999999
Q ss_pred c-CCCcEeccCCCCCCCCCccccC
Q 045947 79 N-SNGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 79 ~-~~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+ .+|.||+++|.++|+|+++|++
T Consensus 138 ~~~~G~ICL~iL~~~WsP~~ti~~ 161 (253)
T 3e46_A 138 SSVTGAICLDILKDQWAAAMTLRT 161 (253)
T ss_dssp CTTTCBBCCGGGTTCCCTTCCHHH
T ss_pred cCCCCeeecccccCCCCCCCCHHH
Confidence 9 5999999999999999999863
No 36
>2nvu_C NEDD8-conjugating enzyme UBC12; multifunction macromolecular complex, ubiquitin, ATP, conformational change, thioester, switch, adenylation, protein turnover, ligase; HET: ATP; 2.80A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=1.6e-39 Score=214.56 Aligned_cols=97 Identities=37% Similarity=0.786 Sum_probs=92.0
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEE-ecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 2 ASKRINKELKDLQKDPPASCSAG-PVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~-~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
|.+||++|++++ ++++|+++. +.++|+++|+++| ||++|||+||.|+++|.||++||++||+|+|.|+||||||+.
T Consensus 27 ~~~RL~kEl~~l--~~~~~i~~~~p~~~nl~~W~~~i-gP~~tpYegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNV~~ 103 (180)
T 2nvu_C 27 AQLRIQKDINEL--NLPKTCDISFSDPDDLLNFKLVI-CPDEGFYKSGKFVFSFKVGQGYPHDPPKVKCETMVYHPNIDL 103 (180)
T ss_dssp HHHHHHHHHHTC--CCCTTEEEECSSTTCTTEEEEEE-CCCSGGGTTBCEEEEEECCTTTTTSCCEEEECSCCCBTTBCT
T ss_pred HHHHHHHHHHhc--CCCCCeEEEecccccccceEEEE-CCCCCCCCCCEEEEEEeCCCcCCCCCCcCceeccCccCCCCC
Confidence 679999999999 467899998 7889999999998 999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|++||++
T Consensus 104 ~G~iCl~iL~~~W~p~~~i~~ 124 (180)
T 2nvu_C 104 EGNVALNILREDWKPVLTINS 124 (180)
T ss_dssp TSBBCCGGGTTSCCTTCCHHH
T ss_pred CCcEEcccccccCCCCCCHHH
Confidence 999999999999999999863
No 37
>4ds2_A Ubiquitin-conjugating enzyme E2, putative; structural genomics, PSI, protein structure initiative; 2.63A {Trypanosoma cruzi}
Probab=100.00 E-value=3.9e-40 Score=215.28 Aligned_cols=99 Identities=31% Similarity=0.665 Sum_probs=95.1
Q ss_pred hHHHHHHHHHHhhcCC------------CCCeeEEecCCCcceeEEEEeCCCCCCCC--CcEEEEEEEcCCCCCCCCCeE
Q 045947 2 ASKRINKELKDLQKDP------------PASCSAGPVADDMFHWQATIMGPSDSPFA--GGVFLVSIHFPPDYPFKPPKV 67 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~------------~~~~~~~~~~~~~~~w~~~i~gp~~tpy~--g~~~~~~i~fp~~YP~~pP~v 67 (101)
|.|||++|+++|++++ ..++.+.+.++|+++|+++|.||++|||+ ||.|+++|.||++||++||+|
T Consensus 9 a~kRL~kEl~~l~~~~~~~~~~~~~~~~~~~i~~~~~~~nl~~w~~~i~Gp~~tpye~~gg~f~~~i~fp~~YP~~pP~v 88 (167)
T 4ds2_A 9 SNKRIIKDLKLLLEEVDANNEANSSGSPHSTAIFSVDTDTIYNWILKVKAPADSVYGGAGNTYQLSVLFSDDYPHEPPTV 88 (167)
T ss_dssp CCHHHHHHHHHHHHHHHHHTTC----CCSSCEEEEEEESSTTEEEEEEECCTTSGGGTTCCEEEEEEECCTTTTTSCCEE
T ss_pred HHHHHHHHHHHHHhCcccccccccccCCCCcEEEEeCCCcccEEEEEEECCCCCCccCCCCEEEEEEECCCCCCCCCCEE
Confidence 6799999999999876 67899999999999999999999999999 999999999999999999999
Q ss_pred EEecCCccccccCCCcEeccCCCCCCCCCcccc
Q 045947 68 AFRTKVFHPNINSNGSICLDILKEQWSPALTIS 100 (101)
Q Consensus 68 ~f~t~i~HPnv~~~G~iCl~~l~~~W~p~~~i~ 100 (101)
+|.|++|||||+.+|.||+++|.++|+|+++|+
T Consensus 89 ~f~t~i~HPnv~~~G~iCl~il~~~W~p~~~i~ 121 (167)
T 4ds2_A 89 RFVTPVYSPLVTGEGGICDRMVNDFWTPDQHAS 121 (167)
T ss_dssp EESSCCCCSSCCTTSCCCTHHHHTTCCTTSCHH
T ss_pred EEeCCcccccCCCCCEEEcccCcCCCCCCCChH
Confidence 999999999999999999999999999999975
No 38
>3fn1_B NEDD8-conjugating enzyme UBE2F; ligase, ATP-binding, cell cycle, nucleotide-binding, UBL CON pathway; 2.50A {Homo sapiens} PDB: 2edi_A
Probab=100.00 E-value=3.8e-39 Score=210.55 Aligned_cols=99 Identities=33% Similarity=0.703 Sum_probs=92.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEec-CCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPV-ADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~-~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
|.+||++|+++|+++++.|+++.+. ++|++.|.++| ||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 15 ~~~RL~kEl~~l~~~~~~gi~~~~~~~~~l~~w~~~i-gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 93 (167)
T 3fn1_B 15 RDKLLVKEVAELEANLPCTCKVHFPDPNKLHCFQLTV-TPDEGYYQGGKFQFETEVPDAYNMVPPKVKCLTKIWHPNITE 93 (167)
T ss_dssp HHHHHHHHHHHHGGGSCTTEEEECSSSSCTTEEEEEE-CCSSSTTTTCCEEEEEECCTTBTTBCCEEEECSCCCCSSBCT
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEeCCCCcceeEEEEE-CCCCCccCCCEEEEEEECCCCCCCCCCeeEecCCcccCCCCC
Confidence 5799999999999999999999855 57899999999 899999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCC------CCCCCccccC
Q 045947 81 NGSICLDILKE------QWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~------~W~p~~~i~~ 101 (101)
+|.||+++|.. +|+|++||++
T Consensus 94 ~G~iCl~iL~~~~~~~~~W~p~~~i~~ 120 (167)
T 3fn1_B 94 TGEICLSLLREHSIDGTGWAPTRTLKD 120 (167)
T ss_dssp TCCBCCGGGSBCSSSTTSBCTTCCHHH
T ss_pred CCEEechhhccCCCCCCCCCCcCcHHH
Confidence 99999999975 7999999863
No 39
>2q0v_A Ubiquitin-conjugating enzyme E2, putative; malaria, structural G structural genomics consortium, SGC, ligase; 2.40A {Plasmodium falciparum} PDB: 3e95_C
Probab=100.00 E-value=4e-39 Score=208.46 Aligned_cols=99 Identities=31% Similarity=0.534 Sum_probs=92.0
Q ss_pred hHHHHHHHHHHhhcC-CCCCeeEEecC-C--CcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccc
Q 045947 2 ASKRINKELKDLQKD-PPASCSAGPVA-D--DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (101)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~~~~~~~~-~--~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPn 77 (101)
|.+||++|+++++++ ++.|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 22 ~~~RL~kEl~~l~~~~~~~~i~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~t~i~HPN 101 (156)
T 2q0v_A 22 RSFRLLDELERGQKGNVSEGVSFGLESADDITLSNWSCTIFGQPGTVFENRIYSLTIFCDDNYPDSPPTVKFDTKIEMSC 101 (156)
T ss_dssp HHHHHHHHHHHHHCC-CCTTEEEEESSTTCTTCCEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhCCCCCCeEEEECCCccccceeeEEEEECCCCCCcCCcEEEEEEECCCcCCCCCCeEEEEcccccCC
Confidence 679999999999998 78899998854 3 5999999999999999999999999999999999999999999999999
Q ss_pred ccCCCcE---eccCCCCCCCCCccccC
Q 045947 78 INSNGSI---CLDILKEQWSPALTISK 101 (101)
Q Consensus 78 v~~~G~i---Cl~~l~~~W~p~~~i~~ 101 (101)
|+.+|+| |+++|+ +|+|++||++
T Consensus 102 V~~~G~icisCL~iL~-~WsP~~ti~~ 127 (156)
T 2q0v_A 102 VDNCGRVIKNNLHILK-NWNRNYTIET 127 (156)
T ss_dssp BCTTSBBCGGGSHHHH-TCCTTCCHHH
T ss_pred CccCCeEehhhccccc-CCCCcCcHHH
Confidence 9999999 888886 5999999863
No 40
>1c4z_D UBCH7, ubiquitin conjugating enzyme E2; bilobal structure, elongated shape, E3 ubiquitin ligase, E2 ubiquitin conjugating enzyme; 2.60A {Homo sapiens} SCOP: d.20.1.1 PDB: 1fbv_C* 3sy2_C 3sqv_C
Probab=100.00 E-value=1.4e-39 Score=210.29 Aligned_cols=100 Identities=38% Similarity=0.872 Sum_probs=92.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEe-cCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccccc
Q 045947 1 MASKRINKELKDLQKDPPASCSAGP-VADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN 79 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~-~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~ 79 (101)
+|.+||++|+++|+++++.|+.+.+ .++|+++|+++|. |++|||+||.|+++|.||++||++||+|+|.|++|||||+
T Consensus 2 ~a~~RL~kEl~~l~~~~~~~~~~~~~~~~~l~~w~~~i~-P~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPnv~ 80 (154)
T 1c4z_D 2 AASRRLMKELEEIRKCGMKNFRNIQVDEANLLTWQGLIV-PDNPPYDKGAFRIEINFPAEYPFKPPKITFKTKIYHPNID 80 (154)
T ss_dssp --CTTHHHHHTTCSSSCCSSCEEECSSCSSSSEEEEEEC-CCSSSCCSCCEEEEEECCTTTTTSCCEEEESSCCCCTTBC
T ss_pred cHHHHHHHHHHHHHhCCCCCEEEeeCCCCchheEEEEEe-CCCCCccCCeEEEEEEeCCCCCCCCCEEEEeCCCccccCC
Confidence 4679999999999999999998654 5679999999998 9999999999999999999999999999999999999999
Q ss_pred CCCcEeccCCC-CCCCCCccccC
Q 045947 80 SNGSICLDILK-EQWSPALTISK 101 (101)
Q Consensus 80 ~~G~iCl~~l~-~~W~p~~~i~~ 101 (101)
.+|.||+++|. ++|+|++||++
T Consensus 81 ~~G~iCl~iL~~~~W~p~~~i~~ 103 (154)
T 1c4z_D 81 EKGQVCLPVISAENWKPATKTDQ 103 (154)
T ss_dssp TTCBBCCTTTSSSSCCTTCCHHH
T ss_pred CCCEEECCCCCCCCCCCCCcHHH
Confidence 99999999996 88999999863
No 41
>1jat_B Ubiquitin-conjugating enzyme variant MMS2; UEV, ligase; 1.60A {Saccharomyces cerevisiae} SCOP: d.20.1.1 PDB: 2gmi_B
Probab=100.00 E-value=4.9e-39 Score=204.49 Aligned_cols=99 Identities=35% Similarity=0.666 Sum_probs=88.9
Q ss_pred hHHHHHHHHHHhhcC-CCCCeeEEecC-C--CcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccc
Q 045947 2 ASKRINKELKDLQKD-PPASCSAGPVA-D--DMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (101)
Q Consensus 2 a~~RL~~E~~~l~~~-~~~~~~~~~~~-~--~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPn 77 (101)
+.+||++|+++++++ ++.|+++.+.+ + |+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~~~~~~d~nl~~w~~~i~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~HPn 86 (138)
T 1jat_B 7 RNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSLSIDCGPNYPDSPPKVTFISKINLPC 86 (138)
T ss_dssp HHHHHHHHHHHHHC----CCEEEEESSTTCTTCCEEEEEEECCSSSTTTTCEEEEEEECCTTTTTSCCEEEESBCCCCTT
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEeCCCCCCcceEEEEEEECCCCCCccceEEEEEEECCCCCCCCCCceEEEcccccCC
Confidence 568999999999998 78999998854 3 4899999999999999999999999999999999999999999999999
Q ss_pred ccCC-CcE--eccCCCCCCCCCccccC
Q 045947 78 INSN-GSI--CLDILKEQWSPALTISK 101 (101)
Q Consensus 78 v~~~-G~i--Cl~~l~~~W~p~~~i~~ 101 (101)
|+.+ |.| |+++|. +|+|++||++
T Consensus 87 v~~~~G~i~~cL~~l~-~W~p~~~i~~ 112 (138)
T 1jat_B 87 VNPTTGEVQTDFHTLR-DWKRAYTMET 112 (138)
T ss_dssp BCTTTCBBCTTSHHHH-TCCTTCCHHH
T ss_pred EeCCCCEEeeecccCC-CCCCcCcHHH
Confidence 9986 999 999885 8999999863
No 42
>2onu_A Ubiquitin-conjugating enzyme, putative; UBC, plasmodium FAL structural genomics consortium, SGC, ligase; HET: PG4; 2.38A {Plasmodium falciparum}
Probab=100.00 E-value=3.4e-40 Score=212.80 Aligned_cols=96 Identities=26% Similarity=0.684 Sum_probs=91.4
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccccc-C
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~-~ 80 (101)
|.+||++|++++++. |+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+ .
T Consensus 3 a~~Rl~kEl~~l~~~---~~~v~~~~~~l~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPni~~~ 79 (152)
T 2onu_A 3 SLTRKQCDFTKLIMA---GYDLELNNGSTQDFDVMFHGPNGTAYEGGIWKVHVTLPDDYPFASPSIGFMNKLLHPNVDEA 79 (152)
T ss_dssp CCCHHHHTHHHHHHH---TCCEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCCTTBCTT
T ss_pred HHHHHHHHHHhcCcC---CCEEEEccCccceEEEEEECCCCCcccceEEEEEEcCcccCCCCCCeEEEecCCccCcCcCc
Confidence 679999999999874 788999999999999999999999999999999999999999999999999999999999 5
Q ss_pred CCcEeccCCCCCCCCCcccc
Q 045947 81 NGSICLDILKEQWSPALTIS 100 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~ 100 (101)
+|.||+++|.++|+|+++|+
T Consensus 80 ~G~iCl~il~~~W~p~~~i~ 99 (152)
T 2onu_A 80 SGSVCLDVINQTWTPLYSLV 99 (152)
T ss_dssp TCBBCHHHHHHHCCTTCCHH
T ss_pred CCeEecccccccCCCCCCHH
Confidence 99999999999999999986
No 43
>2hlw_A Ubiquitin-conjugating enzyme E2 variant 1; ubiquitin-conjugating enzyme variant, UBC13, HUBC13, polyubiquitination, ligase, signaling protein; NMR {Homo sapiens}
Probab=100.00 E-value=2.5e-39 Score=211.88 Aligned_cols=100 Identities=28% Similarity=0.503 Sum_probs=92.4
Q ss_pred hHHHHHHHHHHhhcCCCCC-eeEEec-CCC--cceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccc
Q 045947 2 ASKRINKELKDLQKDPPAS-CSAGPV-ADD--MFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPN 77 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~-~~~~~~-~~~--~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPn 77 (101)
|.+||++|++++++++++| +++.+. ++| +++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+|||||
T Consensus 36 ~~~RL~kEl~~l~~~~~~g~~~~~~~~~~d~nl~~W~~~I~GP~~TpYegG~f~l~i~fp~~YP~~PP~v~F~T~i~HPN 115 (170)
T 2hlw_A 36 RNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTIYENRIYSLKIECGPKYPEAPPFVRFVTKINMNG 115 (170)
T ss_dssp HHHHHHHHHHHHHHCCGGGCEEEEESSTTCSSCCBEEEEECCCSSSTTSSCCBCEEEECCSSCTTSCCEEEECBCCCCSS
T ss_pred HHHHHHHHHHHHHhCCCCCcEEEEecCcccccceeeEEEEeCCCCCCcCCcEEEEEEECCCCCCCCCCeeEEecccccCC
Confidence 5799999999999998888 677763 444 899999999999999999999999999999999999999999999999
Q ss_pred cc-CCCcEeccCCC--CCCCCCccccC
Q 045947 78 IN-SNGSICLDILK--EQWSPALTISK 101 (101)
Q Consensus 78 v~-~~G~iCl~~l~--~~W~p~~~i~~ 101 (101)
|+ .+|.||+++|. ++|+|++||++
T Consensus 116 V~~~~G~ICl~iL~~~~~WsP~~ti~~ 142 (170)
T 2hlw_A 116 VNSSNGVVDPRAISVLAKWQNSYSIKV 142 (170)
T ss_dssp BCSSSCBBCTTTCHHHHTCCSSCCHHH
T ss_pred EeCCCCEEEhhhcCCCCCCCccCcHHH
Confidence 99 79999999998 89999999863
No 44
>2y9m_A Ubiquitin-conjugating enzyme E2-21 kDa; ligase-transport protein complex, ubiquitin conjugating ENZY complex, peroxisomal protein; 2.60A {Saccharomyces cerevisiae} PDB: 2y9p_A 2y9o_A
Probab=100.00 E-value=1.6e-38 Score=208.47 Aligned_cols=100 Identities=39% Similarity=0.768 Sum_probs=91.2
Q ss_pred hHHHHHHHHHHhhc-C-C------CC---CeeEEe-cCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEE
Q 045947 2 ASKRINKELKDLQK-D-P------PA---SCSAGP-VADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAF 69 (101)
Q Consensus 2 a~~RL~~E~~~l~~-~-~------~~---~~~~~~-~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f 69 (101)
|.+||++|+++|++ . + +. ++.+.+ .++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|
T Consensus 7 ~~~RL~kEl~~l~~~~~~~~~~~~p~~g~~~~~~p~~~~nl~~w~~~I~Gp~~tpyegg~f~~~i~fp~~YP~~PP~v~f 86 (172)
T 2y9m_A 7 CMSRIVKEYKVILKTLASDDPIANPYRGIIESLNPIDETDLSKWEAIISGPSDTPYENHQFRILIEVPSSYPMNPPKISF 86 (172)
T ss_dssp HHHHHHHHHHHHHHHHTCCCTTTCTTTTTEEEEEESSTTCTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEE
T ss_pred HHHHHHHHHHHHHhccCCcccccCCCCcceEEEecCCCCchhEEEEEEECCCCCcccCCEEEEEEECCCcCCCCCCEEEE
Confidence 67999999999998 4 3 33 466777 77899999999999999999999999999999999999999999
Q ss_pred ec-CCcccccc-CCCcEeccCCC-CCCCCCccccC
Q 045947 70 RT-KVFHPNIN-SNGSICLDILK-EQWSPALTISK 101 (101)
Q Consensus 70 ~t-~i~HPnv~-~~G~iCl~~l~-~~W~p~~~i~~ 101 (101)
.| +||||||+ .+|.||+++|. ++|+|++||++
T Consensus 87 ~t~~i~HPni~~~~G~iCl~iL~~~~W~p~~~i~~ 121 (172)
T 2y9m_A 87 MQNNILHCNVKSATGEICLNILKPEEWTPVWDLLH 121 (172)
T ss_dssp CTTSCCCTTEETTTTEECCGGGSTTTCCTTCCHHH
T ss_pred eeCCeecCCCcCCCCEEeccccCCCCCCCcCcHHH
Confidence 99 99999996 89999999998 89999999863
No 45
>4ddg_A Ubiquitin-conjugating enzyme E2 D2, ubiquitin THI OTUB1; inhibition, hydrolase-ligase complex; 3.30A {Homo sapiens} PDB: 4ddi_A
Probab=100.00 E-value=9.1e-39 Score=232.00 Aligned_cols=101 Identities=79% Similarity=1.402 Sum_probs=98.1
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
+|.|||++|+++|++++++|+++.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|++|||||+.
T Consensus 3 ~a~~RL~kEl~~l~~~~~~~~~~~p~~~nl~~w~~~i~Gp~~tpyegg~f~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 82 (399)
T 4ddg_A 3 MALKRIHKELNDLARDPPAQCSAGPVGDDMFHWQATIMGPNDSPYQGGVFFLTIHFPTDYPFKPPKVAFTTRIYHPNINS 82 (399)
T ss_dssp HHHHHHHHHHHHHHHSCCSSEEEEEETTEEEEEEEEEECCTTSSSTTCEEEEEEECCSSTTTSCCEEEESSCCCCTTBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCcceEEEEEEECCCCCCCCCCEEEEEEECCcccCCCCcEEEeeccccccccCC
Confidence 47899999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|++||++
T Consensus 83 ~G~iCl~il~~~W~p~~~i~~ 103 (399)
T 4ddg_A 83 NGSISLDILRSQWSPALTISK 103 (399)
T ss_dssp TCBBCCGGGTTSCCTTCCHHH
T ss_pred CCeEeCcccccCCCccccHHH
Confidence 999999999999999999863
No 46
>2z5d_A Ubiquitin-conjugating enzyme E2 H; UBE2H, SGC, ligase, structural genomics, structural genomics consortium; 2.10A {Homo sapiens}
Probab=100.00 E-value=4.5e-39 Score=212.08 Aligned_cols=96 Identities=28% Similarity=0.779 Sum_probs=90.2
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC-
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS- 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~- 80 (101)
|.+||++|+++|++ .|+++.+. +|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+.
T Consensus 26 a~~RL~kEl~~l~~---~g~~v~~~-ddl~~W~~~I~GP~~tpYegG~f~l~i~fp~~YP~~PP~V~F~t~i~HPNV~~~ 101 (179)
T 2z5d_A 26 GKRRMDTDVIKLIE---SKHEVTIL-GGLNEFVVKFYGPQGTPYEGGVWKVRVDLPDKYPFKSPSIGFMNKIFHPNIDEA 101 (179)
T ss_dssp HHHHHHHHHHHHHH---SSSCEEEE-EETTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHhcCc---CCCEEEEC-CCCceeEEEEECCCCCCccCCEEEEEeeCCCCCCCCCceEEEecCCccCcCCCC
Confidence 67999999999985 47888877 67899999999999999999999999999999999999999999999999998
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|+++|++
T Consensus 102 ~G~ICL~iL~~~WsP~~ti~~ 122 (179)
T 2z5d_A 102 SGTVCLDVINQTWTALYDLTN 122 (179)
T ss_dssp TCBBCHHHHHHHCCTTCCTTH
T ss_pred CCeEeccccccCCCCCCCHHH
Confidence 999999999999999999873
No 47
>3o2u_A NEDD8-conjugating enzyme UBC12; E2 conjugase, ligase; 2.00A {Saccharomyces cerevisiae} PDB: 3tdi_C
Probab=100.00 E-value=6.5e-38 Score=208.37 Aligned_cols=97 Identities=34% Similarity=0.716 Sum_probs=91.9
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEE----ecCCCcc---eeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCc
Q 045947 2 ASKRINKELKDLQKDPPASCSAG----PVADDMF---HWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVF 74 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~----~~~~~~~---~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~ 74 (101)
|.+||++|+++++ .++|+++. +.++|++ +|+++|. |++|||+||.|+++|.||++||++||+|+|.|+||
T Consensus 30 a~~RL~kEl~~l~--~~~~i~~~~~~~p~~~nl~~~~~w~~~I~-p~~tpyegg~f~~~i~fp~~YP~~PP~v~f~t~i~ 106 (190)
T 3o2u_A 30 ARIRLKRDLDSLD--LPPTVTLNVITSPDSADRSQSPKLEVIVR-PDEGYYNYGSINFNLDFNEVYPIEPPKVVCLKKIF 106 (190)
T ss_dssp HHHHHHHHHHTCC--CCTTEEEEEEECTTCCCTTSCCEEEEEEC-CSSSTTTTCCEEEEEECCTTTTTSCCEEEECSCCC
T ss_pred HHHHHHHHHHhcc--CCCCEEEEecCCCCCccCCcCCeEEEEEc-CCCCCCCCCEEEEEEECCCCCCCCCceeEEecCcc
Confidence 6899999999998 67899998 7889999 9999996 88899999999999999999999999999999999
Q ss_pred cccccCCCcEeccCCCCCCCCCccccC
Q 045947 75 HPNINSNGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 75 HPnv~~~G~iCl~~l~~~W~p~~~i~~ 101 (101)
||||+.+|.||+++|.++|+|++||++
T Consensus 107 HPnV~~~G~iCl~iL~~~W~p~~~i~~ 133 (190)
T 3o2u_A 107 HPNIDLKGNVCLNILREDWSPALDLQS 133 (190)
T ss_dssp CTTBCTTSBBCCGGGTTTCCTTCCHHH
T ss_pred cCCCCCCCeEechhccCCCCCCCCHHH
Confidence 999999999999999999999999863
No 48
>2f4w_A Ubiquitin-conjugating enzyme E2, J2; endoplasmic reticulum, ligase, UBL conjugation pathway, structural genomics consortium (SGC); 2.00A {Homo sapiens} SCOP: d.20.1.1
Probab=100.00 E-value=9.9e-38 Score=207.05 Aligned_cols=99 Identities=29% Similarity=0.734 Sum_probs=88.3
Q ss_pred ChHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccC
Q 045947 1 MASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINS 80 (101)
Q Consensus 1 ~a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~ 80 (101)
.|.+||++|+++|++++++||.+.+.++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+ ||||+.
T Consensus 14 ~a~~RL~kEl~~l~~~~~~~i~~~p~~~nl~~W~~~I~GP~~TpYegG~f~l~i~fP~~YP~~PP~v~f~T~--~~~~~~ 91 (187)
T 2f4w_A 14 TATQRLKQDYLRIKKDPVPYICAEPLPSNILEWHYVVRGPEMTPYEGGYYHGKLIFPREFPFKPPSIYMITP--NGRFKC 91 (187)
T ss_dssp CHHHHHHHHHHHHHHSCCTTEEEEEETTEEEEEEEEEECCTTSTTTTCEEEEEEECCTTTTSSCCEEEECSC--CSSBCT
T ss_pred HHHHHHHHHHHHHHhCCCCCEEEEEcCCccceeEEEEeCCCCCCCCCCEEEEEEEcCCCCCCCCCcccccCC--Cceecc
Confidence 378999999999999999999999999999999999999999999999999999999999999999999999 999999
Q ss_pred CCcEeccCC---CCCCCCCccccC
Q 045947 81 NGSICLDIL---KEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l---~~~W~p~~~i~~ 101 (101)
+|.||+++| .++|+|+++|++
T Consensus 92 ~G~ICL~iL~~~~~~W~P~~ti~~ 115 (187)
T 2f4w_A 92 NTRLCLSITDFHPDTWNPAWSVST 115 (187)
T ss_dssp TSCBC----------CCTTCCHHH
T ss_pred CCeEeeeccccCccCCCCcCcHHH
Confidence 999999999 689999999863
No 49
>1yf9_A Ubiquitin carrier protein 4; SGPP, structural genomics, PSI, protein structure initiative ubiquitin conjugating enzyme; 2.00A {Leishmania major} SCOP: d.20.1.1
Probab=100.00 E-value=2.8e-38 Score=207.16 Aligned_cols=96 Identities=26% Similarity=0.743 Sum_probs=88.7
Q ss_pred hHHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCcccccc-C
Q 045947 2 ASKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNIN-S 80 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~-~ 80 (101)
|.+||++|++++++++. ++ ..++|+++|+++|.||++|||+||.|+++|.||++||++||+|+|.|+||||||+ .
T Consensus 13 ~~~RL~~El~~l~~~~~-~v---~~~~~l~~w~~~I~GP~~tpyegg~f~~~i~fp~~YP~~PP~v~F~t~i~HPNi~~~ 88 (171)
T 1yf9_A 13 SNRRREMDYMRLCNSTR-KV---YPSDTVAEFWVEFKGPEGTPYEDGTWMLHVQLPSDYPFKSPSIGFCNRILHPNVDER 88 (171)
T ss_dssp CCHHHHHHHHHHHSSSS-CE---EECSSTTEEEEEEECCTTSTTTTCEEEEEEECCTTTTTSCCEEEESSCCCBTTBCTT
T ss_pred HHHHHHHHHHHHHhCCC-CC---CCCCCceEEEEEEECCCCCCccCceEEEEEEcCCCCCCCCCeEEeecCcccccCccc
Confidence 46999999999999863 43 3578999999999999999999999999999999999999999999999999999 5
Q ss_pred CCcEeccCCCCCCCCCccccC
Q 045947 81 NGSICLDILKEQWSPALTISK 101 (101)
Q Consensus 81 ~G~iCl~~l~~~W~p~~~i~~ 101 (101)
+|.||+++|.++|+|+++|++
T Consensus 89 ~G~iCl~iL~~~W~p~~~i~~ 109 (171)
T 1yf9_A 89 SGSVCLDVINQTWTPMYQLEN 109 (171)
T ss_dssp TCBBCHHHHHHHCCTTCCTHH
T ss_pred CCeEeccccccCCCCCCcHHH
Confidence 999999999999999999863
No 50
>1zuo_A Hypothetical protein LOC92912; ligase, ubiquitin-conjugating enzyme, structural genomics consortium ,SGC; 1.80A {Homo sapiens} SCOP: d.20.1.1 PDB: 2qgx_A
Probab=100.00 E-value=3.3e-38 Score=209.18 Aligned_cols=100 Identities=28% Similarity=0.621 Sum_probs=94.6
Q ss_pred hHHHHHHHHHHhhcCC---CCCeeEEecCCCcceeEEEEeCC-CCCCCCC-----------cEEEEEEEcCCCCCCCCCe
Q 045947 2 ASKRINKELKDLQKDP---PASCSAGPVADDMFHWQATIMGP-SDSPFAG-----------GVFLVSIHFPPDYPFKPPK 66 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~---~~~~~~~~~~~~~~~w~~~i~gp-~~tpy~g-----------~~~~~~i~fp~~YP~~pP~ 66 (101)
|.+||++|+++|++++ +.++++.+.++|+++|+++|.|| ++|||+| |.|+++|.||++||++||+
T Consensus 28 a~~RL~kEl~~l~~~~~~~~~~~~~~p~~dnl~~W~~~I~Gp~~~tpy~ggl~~~~~~~g~g~f~l~i~fp~~YP~~PP~ 107 (186)
T 1zuo_A 28 ASDRLMKELRDIYRSQSYKTGIYSVELINDSLYDWHVKLQKVDPDSPLHSDLQILKEKEGIEYILLNFSFKDNFPFDPPF 107 (186)
T ss_dssp HHHHHHHHHHHHHTSHHHHTTSEEEEEETTEEEEEEEEECCCCTTSHHHHHHHHHHHHHSCCSEEEEEECCTTTTSSCCE
T ss_pred HHHHHHHHHHHHHhCCCCCCCcEEEEEcCCccceeEEEEECCCCCCCccccchhhccccCceEEEEEEECCCCCCCCCCe
Confidence 6799999999999987 68899999999999999999997 9999998 8999999999999999999
Q ss_pred EEEecCCccc-cccCCCcEeccCCC-CCCCCCccccC
Q 045947 67 VAFRTKVFHP-NINSNGSICLDILK-EQWSPALTISK 101 (101)
Q Consensus 67 v~f~t~i~HP-nv~~~G~iCl~~l~-~~W~p~~~i~~ 101 (101)
|+|.+++||| ||+.+|.||+++|. ++|+|++||++
T Consensus 108 V~f~tpi~hPnnV~~~G~ICL~iL~~~~WsP~~ti~~ 144 (186)
T 1zuo_A 108 VRVVLPVLSGGYVLGGGALCMELLTKQGWSSAYSIES 144 (186)
T ss_dssp EEEEESCEESTTBCGGGBBCCGGGSTTTCCTTSCHHH
T ss_pred EEEeCCccCCCccCCCCcEEeccCCCCCCCCcCcHHH
Confidence 9999999999 69999999999997 78999999863
No 51
>3ceg_A Baculoviral IAP repeat-containing protein 6; apoptosis, ligase, protease inhibitor, thiol protease inhibitor, UBL conjugation pathway; HET: MSE; 2.01A {Homo sapiens}
Probab=100.00 E-value=4.3e-36 Score=212.12 Aligned_cols=99 Identities=33% Similarity=0.677 Sum_probs=91.9
Q ss_pred hHHHHHHHHHHhhcCCCCC----eeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecC-----
Q 045947 2 ASKRINKELKDLQKDPPAS----CSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTK----- 72 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~~----~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~----- 72 (101)
+.+||++|+++|++++++| +.+.+.++|++.|+++|.||++|||+||.|+++|.||++||++||+|+|.|+
T Consensus 77 ~~kRL~kEl~~L~k~~p~g~~~~i~v~~~ednl~~w~~~I~GP~~TpYegG~F~l~I~fP~dYP~~PP~V~F~T~~g~~~ 156 (323)
T 3ceg_A 77 RARRLAQEAVTLSTSLPLSSSSSVFVRCDEERLDIMKVLITGPADTPYANGCFEFDVYFPQDYPSSPPLVNLETTGGHSV 156 (323)
T ss_dssp HHHHHHHHHHHHHHHCCCCSSCCEEEEEESSCTTEEEEEEEBCTTSTTBTCEEEEEEECCTTTTTSCCEEEECCSTTTTC
T ss_pred HHHHHHHHHHHHHhCCCCCcccceeecccCCCccccEEEEeCCCCCCcCCCEEEEEEeCCCCCCCCCCeEEEeccCCCcc
Confidence 5799999999999987764 4567788999999999999999999999999999999999999999999998
Q ss_pred CccccccCCCcEeccCCC-------CCCCCCc-ccc
Q 045947 73 VFHPNINSNGSICLDILK-------EQWSPAL-TIS 100 (101)
Q Consensus 73 i~HPnv~~~G~iCl~~l~-------~~W~p~~-~i~ 100 (101)
+|||||+.+|.||+++|. ++|+|++ ||+
T Consensus 157 ifHPNV~~~G~ICLsiL~~~~g~~~e~WsPa~stI~ 192 (323)
T 3ceg_A 157 RFNPNLYNDGKVCLSILNTWHGRPEEKWNPQTSSFL 192 (323)
T ss_dssp CCBTTBCTTCBBCCGGGTSSCCCGGGSCCTTTCCHH
T ss_pred cccCCCCcCCeEechhhccccCCCcCCCCcCcCCHH
Confidence 999999999999999997 6899999 665
No 52
>2z6o_A UFM1-conjugating enzyme 1; UFC1, ubiquitin, UBL, polymorphism, UBL conjugation pathway, ligase; 1.60A {Homo sapiens} PDB: 2z6p_A 1ywz_A 2in1_A 2k07_A 3e2g_A 3evx_A
Probab=99.96 E-value=5.1e-32 Score=174.79 Aligned_cols=92 Identities=18% Similarity=0.320 Sum_probs=85.1
Q ss_pred HHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCc----------EEEEEEEcCCCCCCCCCeEEEecC
Q 045947 3 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGG----------VFLVSIHFPPDYPFKPPKVAFRTK 72 (101)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~----------~~~~~i~fp~~YP~~pP~v~f~t~ 72 (101)
.+||++|+++|++ ++.+.++|++.|.+.+.||++|+|+|| .|.+++.||++||.+||+|+|.+.
T Consensus 34 ~~RL~eE~k~L~k------~v~p~k~n~~~W~~ii~Gp~gT~WeGgcw~~~~~~~y~F~L~~~fPe~YP~~PPeV~F~~~ 107 (172)
T 2z6o_A 34 VQRLKEEYQSLIR------YVENNKNADNDWFRLESNKEGTRWFGKCWYIHDLLKYEFDIEFDIPITYPTTAPEIAVPEL 107 (172)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HhccCccccceeEEeecCCCCCcccCcccccccccceEEEEEEECCCCCCCCCCeeeeCCC
Confidence 7999999999999 467778899999999999999999999 999999999999999999999997
Q ss_pred -CccccccCCCcEeccCC-CC---CCCCCcccc
Q 045947 73 -VFHPNINSNGSICLDIL-KE---QWSPALTIS 100 (101)
Q Consensus 73 -i~HPnv~~~G~iCl~~l-~~---~W~p~~~i~ 100 (101)
+|||||+.+|+||||+| +. .|+|+++|.
T Consensus 108 ~~~hpnmY~~G~ICLdIL~kp~Ws~~~P~~~Ia 140 (172)
T 2z6o_A 108 DGKTAKMYRGGKICLTDHFKPLWARNVPKFGLA 140 (172)
T ss_dssp TTTCSSBCTTSBBCCCTTHHHHHHHHTTSCCHH
T ss_pred CCCCCCCCCCCcEechhhccccccccCCccCHH
Confidence 99999999999999999 44 455999875
No 53
>3kpa_A Probable ubiquitin fold modifier conjugating ENZY; UBL conjugation pathway, ligase, structural genomics, PSI; 2.20A {Leishmania major} SCOP: d.20.1.4
Probab=99.87 E-value=5.8e-24 Score=134.82 Aligned_cols=87 Identities=21% Similarity=0.388 Sum_probs=78.2
Q ss_pred HHHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCc----------EEEEEEEcCCCCCCCCCeEEEecC
Q 045947 3 SKRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGG----------VFLVSIHFPPDYPFKPPKVAFRTK 72 (101)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~----------~~~~~i~fp~~YP~~pP~v~f~t~ 72 (101)
..||..||+.|.+ +++.+.++-..|...+.|++||+|+|+ .|.+++.||.+||..||+|+|.+.
T Consensus 36 ~~RlkeEy~alI~------yv~~nK~~d~dWf~~~sn~~GT~W~G~cw~~~~~~kyeFkLefdiP~tYP~tPPeI~Fp~l 109 (168)
T 3kpa_A 36 TARLKEEYASLIT------YVEHNKASDSHWFHLESNPQGTRWYGTCWTYYKNEKYEFEMNFDIPVTYPQAPPEIALPEL 109 (168)
T ss_dssp HHHHHHHHHHHHH------HHHHHHHTTCCCEEEEECTTSCEEEEEEEEEETTEEEEEEEEEECCTTTTTSCCCCBCGGG
T ss_pred HHHHHHHHHHHHH------HHHhcccccCCeeeecCCCCCCcccCccceeeccceeEEEEEEeCCccCCCCCCEeecccc
Confidence 4799999999977 466666667789999999999999999 899999999999999999999995
Q ss_pred -CccccccCCCcEeccCCCCCCCCCcc
Q 045947 73 -VFHPNINSNGSICLDILKEQWSPALT 98 (101)
Q Consensus 73 -i~HPnv~~~G~iCl~~l~~~W~p~~~ 98 (101)
.+|||++.+|+|||+++ |+|+++
T Consensus 110 dgkt~kmYr~GkICLdIh---wkPlW~ 133 (168)
T 3kpa_A 110 EGKTVKMYRGGKICMTTH---FFPLWA 133 (168)
T ss_dssp TTTCSSEETTTEECCCTT---HHHHHH
T ss_pred cCcCccccCCCcEEeccc---cchhhH
Confidence 89999999999999986 888764
No 54
>3r3q_A Suppressor protein STP22 of temperature-sensitive factor receptor and arginine permease...; endosomal sorting, ESCRT-I; 1.45A {Saccharomyces cerevisiae} SCOP: d.20.1.2 PDB: 3r42_A 1uzx_A*
Probab=99.76 E-value=4.6e-19 Score=114.77 Aligned_cols=96 Identities=24% Similarity=0.346 Sum_probs=73.7
Q ss_pred HHHHHHHHHhhcCCC---CCeeEEecCCCcceeEEEEeCCCCCCCCCcE---EEEEEEcCCCCCCCCCeEEEec------
Q 045947 4 KRINKELKDLQKDPP---ASCSAGPVADDMFHWQATIMGPSDSPFAGGV---FLVSIHFPPDYPFKPPKVAFRT------ 71 (101)
Q Consensus 4 ~RL~~E~~~l~~~~~---~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~---~~~~i~fp~~YP~~pP~v~f~t------ 71 (101)
+|..+|+.++.+.-+ +...+...++...++-+.+.|.-..+|+|+. |.+.|-||++||++||.|.|.+
T Consensus 31 ~~~~~dv~~~l~~yp~L~p~t~~yt~~dG~~~~Ll~l~Gtipv~y~g~~~Yn~pi~IwlP~~YP~~PP~v~v~p~t~~m~ 110 (162)
T 3r3q_A 31 RTTFHDSLALLDNFHSLRPRTRVFTHSDGTPQLLLSIYGTISTGEDGSSPHSIPVIMWVPSMYPVKPPFISINLENFDMN 110 (162)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEECTTSCEEEEEEEEEEEECSCCTTSCCEEEEEEECCTTTTTSCCEEEECGGGCCTT
T ss_pred hHHHHHHHHHHHhCCCCceeeeeEEcCCCChheEEEEECccCccccCcccccccEEEEeCcccCCCCCEEEEECCCcccc
Confidence 577788887765321 2223344555556677777776668999998 8899999999999999998865
Q ss_pred -C---Cc-cccccCCCcEeccCCCCCCCC-Ccccc
Q 045947 72 -K---VF-HPNINSNGSICLDILKEQWSP-ALTIS 100 (101)
Q Consensus 72 -~---i~-HPnv~~~G~iCl~~l~~~W~p-~~~i~ 100 (101)
+ |+ |||||.+|+||+++| ++|+| +.+|.
T Consensus 111 ~~~~~I~~hpnVD~~G~I~lpyL-~~W~p~~s~L~ 144 (162)
T 3r3q_A 111 TISSSLPIQEYIDSNGWIALPIL-HAWDPAAMNLI 144 (162)
T ss_dssp TSCTTSTHHHHBCTTSBBCCGGG-GSCCGGGCCHH
T ss_pred ccccccCCCCCCCCCCcEeCccc-ccCCCCcCcHH
Confidence 1 77 999999999999999 57999 55654
No 55
>3obq_A Tumor susceptibility gene 101 protein; protein transprot, ubiquitin binding, protein transport; 1.40A {Homo sapiens} SCOP: d.20.1.2 PDB: 3obs_A 3obu_A 3obx_A 3p9g_A* 3p9h_A* 2f0r_A 1kpp_A 1kpq_A 1m4p_A 1m4q_A 1s1q_A
Probab=99.53 E-value=7.3e-15 Score=93.62 Aligned_cols=89 Identities=19% Similarity=0.375 Sum_probs=65.9
Q ss_pred HHHHHHHHhhcCCC-CCeeEE---ecCCCcceeEEEEeCCCCCCCCCcEEEE--EEEcCCCCCCCCCeEEEecC------
Q 045947 5 RINKELKDLQKDPP-ASCSAG---PVADDMFHWQATIMGPSDSPFAGGVFLV--SIHFPPDYPFKPPKVAFRTK------ 72 (101)
Q Consensus 5 RL~~E~~~l~~~~~-~~~~~~---~~~~~~~~w~~~i~gp~~tpy~g~~~~~--~i~fp~~YP~~pP~v~f~t~------ 72 (101)
+..+|+..+.+.-+ -..... -...+++.|.++|. .+|+|+.|.+ .|-||++||++||.| |.++
T Consensus 24 ~t~~dv~~vl~~yp~L~p~~~~y~G~~~~LL~l~GtIp----v~y~g~~y~iPi~Iwlp~~YP~~pP~v-fv~pt~~m~I 98 (146)
T 3obq_A 24 LTVRETVNVITLYKDLKPVLDSYGTGSRELMNLTGTIP----VPYRGNTYNIPICLWLLDTYPYNPPIC-FVKPTSSMTI 98 (146)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEESSSTTCEEEEEEEEEE----EECSSCEEEEEEEEECCTTTTTSCCEE-EECCCTTEEE
T ss_pred hhHHHHHHHHHhCCCCceEeeeeeCChheEEEEEEEee----eeecCccccceEEEEeCccCCCCCCEE-EEeCCCCCEE
Confidence 44567766655321 111111 22357899999996 5799999985 888999999999999 6655
Q ss_pred CccccccCCCcEeccCCCCCCCC-Cccc
Q 045947 73 VFHPNINSNGSICLDILKEQWSP-ALTI 99 (101)
Q Consensus 73 i~HPnv~~~G~iCl~~l~~~W~p-~~~i 99 (101)
..|||||.+|+||++.|.+ |++ ..+|
T Consensus 99 ~~~~~Vd~~G~i~lpyL~~-W~~~~snL 125 (146)
T 3obq_A 99 KTGKHVDANGKIYLPYLHE-WKHPQSDL 125 (146)
T ss_dssp CCBTTBCTTCBBCCHHHHT-CCTTTCCH
T ss_pred CCCCCCCCCCCEecccccc-cCCCCCCH
Confidence 5899999999999999954 988 5554
No 56
>2ebm_A RWD domain-containing protein 1; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.28 E-value=0.0024 Score=38.90 Aligned_cols=66 Identities=14% Similarity=0.165 Sum_probs=43.0
Q ss_pred HHHHHHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEec
Q 045947 4 KRINKELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRT 71 (101)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t 71 (101)
.+...|+..|..--+..+.+. ++....+.+.+....+..-+.-.+.+.+.||++||.+||.|...+
T Consensus 13 e~q~~EleaL~sIy~d~~~~~--~~~~~~~~i~i~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 78 (128)
T 2ebm_A 13 EEQRNELEALESIYPDSFTVL--SENPPSFTITVTSEAGENDETVQTTLKFTYSEKYPDEAPLYEIFS 78 (128)
T ss_dssp HHHHHHHHHHHHHCSSSEEEC--CSSSCEEEECCBCCCCTTSCCCBEEEEEECCSSTTTSCCEEEEEE
T ss_pred HHHHHHHHHHHHHccCceEEc--cCCCCEEEEEEecCCCCCcCceeEEEEEEeCCCCCCCCceEEEEc
Confidence 456778888876544455442 223456666665322222234478899999999999999998866
No 57
>2day_A Ring finger protein 25; ligase, metal-binding, UB1 conjugation, UB1 conjugation pathway, RWD domain, alpha+beta sandwich fold, structural genomics; NMR {Homo sapiens} SCOP: d.20.1.3 PDB: 2dmf_A
Probab=97.01 E-value=0.0079 Score=36.51 Aligned_cols=68 Identities=13% Similarity=0.179 Sum_probs=42.0
Q ss_pred HHHHHHHHhhcCCCCCeeEEecCC--CcceeEEEEeCCCCCCCC--CcEEEEEEEcCCCCCCCCCeEEEecC
Q 045947 5 RINKELKDLQKDPPASCSAGPVAD--DMFHWQATIMGPSDSPFA--GGVFLVSIHFPPDYPFKPPKVAFRTK 72 (101)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~~--~~~~w~~~i~gp~~tpy~--g~~~~~~i~fp~~YP~~pP~v~f~t~ 72 (101)
....|+..|..--...+....... +...+.+.+..+.+..-+ .-.+.+.+.+|++||..+|.|...+.
T Consensus 12 ~~~~EleaL~SIY~de~~~~~~~~~~~~~~~~i~l~~~~~~~~~~~~~~~~L~~~~p~~YP~~~P~i~~~~~ 83 (128)
T 2day_A 12 VLPSEVEVLESIYLDELQVIKGNGRTSPWEIYITLHPATAEDQDSQYVCFTLVLQVPAEYPHEVPQISIRNP 83 (128)
T ss_dssp HHHHHHHHHHHHSTTTEEEECCTTSSCCEEEEEEECCSCCSSSSCCCCEEEEEEEECSSTTSSCCEEEEEEE
T ss_pred HHHHHHHHHHHHCCCceEEecCCCCCCCeEEEEEEecCCCCCccccceeEEEEEEcCCCCCCCCCCeEEEcC
Confidence 467788888765555565432221 233445555422221111 24688999999999999999988763
No 58
>2yz0_A Serine/threonine-protein kinase GCN2; A-B-B-B-B-A-A, amino acid starvation signal response, EIF2alpha kinase, transferase; NMR {Saccharomyces cerevisiae}
Probab=96.95 E-value=0.014 Score=35.83 Aligned_cols=67 Identities=12% Similarity=0.208 Sum_probs=41.3
Q ss_pred HHHHHHHHhhcCCCCCeeEEecC------CCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecC
Q 045947 5 RINKELKDLQKDPPASCSAGPVA------DDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTK 72 (101)
Q Consensus 5 RL~~E~~~l~~~~~~~~~~~~~~------~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~ 72 (101)
+-..|+..|..--+..+...... .....+.+.+....+ .-..-.+.+.+.+|++||..+|.|...+.
T Consensus 14 ~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~f~I~l~~~~~-~~~~~~~~L~~~~p~~YP~~~P~i~l~~~ 86 (138)
T 2yz0_A 14 IQCNELEAIRSIYMDDFTDLTKRKSSWDKQPQIIFEITLRSVDK-EPVESSITLHFAMTPMYPYTAPEIEFKNV 86 (138)
T ss_dssp HHHHHHHHHHTTSSSSEECCSTTSSSSCSSCCSCEEEEEECSSC-SSCCCEEEEEEECCSSTTSSCCEEEEECC
T ss_pred HHHHHHHHHHHHChhhheecccccccccCCCCcEEEEEEecCCC-CCCceEEEEEEECCCCCCCCCCeEEEecC
Confidence 45667777766444444332111 124567777763222 11234788999999999999999998653
No 59
>1ukx_A GCN2, GCN2 EIF2alpha kinase; UBC-like fold, triple beta-turns, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.20.1.3
Probab=95.90 E-value=0.063 Score=32.75 Aligned_cols=67 Identities=15% Similarity=0.201 Sum_probs=39.9
Q ss_pred HHHHHHHHHhhcCCCCCeeEEecCC-----CcceeEEEEeCCCC-C-CCCCcEEEEEEEcCCCCCCCCCeEEEec
Q 045947 4 KRINKELKDLQKDPPASCSAGPVAD-----DMFHWQATIMGPSD-S-PFAGGVFLVSIHFPPDYPFKPPKVAFRT 71 (101)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~~~~~~~~-----~~~~w~~~i~gp~~-t-py~g~~~~~~i~fp~~YP~~pP~v~f~t 71 (101)
.+...|+..|..--...+....... ....+.+.+. +.+ . .-..-.+.+.+.||++||..+|.|...+
T Consensus 13 e~q~~EleaL~SIY~d~~~~~~~~~~~~~~~~~~~~i~l~-~~~~~~~~~~~~~~L~v~~p~~YP~~~P~i~l~~ 86 (137)
T 1ukx_A 13 QRQDHELQALEAIYGSDFQDLRPDARGRVREPPEINLVLY-PQGLAGEEVYVQVELRVKCPPTYPDVVPEIDLKN 86 (137)
T ss_dssp HHHHHHHHHHHHHTSSSEEECCCCCSSSCCCCCCEEEEEC-CTTSCSSSCSCEEEEEECCCTTTTSSCCCCEEEE
T ss_pred HHHHHHHHHHHHHCcccceeccCcccCccCCCcEEEEEEe-cCCcCCcccceEEEEEEECCCCCCCCCCcEEEec
Confidence 3566777777765444454321111 1345566664 322 1 0012468899999999999999998843
No 60
>2ebk_A RWD domain-containing protein 3; alpha+beta sandwich fold, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=95.54 E-value=0.04 Score=33.38 Aligned_cols=66 Identities=15% Similarity=0.102 Sum_probs=39.5
Q ss_pred HHHHHHHHhhcCCCC--CeeEEe-cCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEec
Q 045947 5 RINKELKDLQKDPPA--SCSAGP-VADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRT 71 (101)
Q Consensus 5 RL~~E~~~l~~~~~~--~~~~~~-~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t 71 (101)
....|+..|..--.. .+.+.. ...+...+.+.+.. .+..-..-.+.+.+.+|.+||..+|.|...+
T Consensus 11 ~q~~EleaL~SIy~d~~e~~~~~~~~~~~~~f~i~l~~-~~~~~~~~~~~L~~~~p~~YP~~~P~i~l~~ 79 (128)
T 2ebk_A 11 PVQEELSVLAAIFCRPHEWEVLSRSETDGTVFRIHTKA-EGFMDADIPLELVFHLPVNYPSCLPGISINS 79 (128)
T ss_dssp HHHHHHHHHHHHHCCTTTCCCSEECSSSCEEEEEEEEC-CTTTTCCCEEEEEEEECSSTTSSCCCCCCCC
T ss_pred HHHHHHHHHHHHcCCCCceEEecCCCCCCCeEEEEecC-CCCCCCCeEEEEEEECCCCCCCCCCeEEEEh
Confidence 356677777653222 343321 11234577777753 2211112478899999999999999987654
No 61
>2dax_A Protein C21ORF6; RWD domain, alpha+beta sandwich fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.62 E-value=0.055 Score=33.80 Aligned_cols=24 Identities=25% Similarity=0.537 Sum_probs=21.3
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecC
Q 045947 49 VFLVSIHFPPDYPFKPPKVAFRTK 72 (101)
Q Consensus 49 ~~~~~i~fp~~YP~~pP~v~f~t~ 72 (101)
.+.+.+.+|.+||..||.|.....
T Consensus 74 ~l~L~v~lP~~YP~~~P~i~l~~~ 97 (152)
T 2dax_A 74 MFSLACILPFKYPAVLPEITVRSV 97 (152)
T ss_dssp EEEEEEEECSSTTSSCCCCEEECT
T ss_pred eEEEEEECCCCCCCCCCeEEEEcc
Confidence 588899999999999999988764
No 62
>2daw_A RWD domain containing protein 2; alpha+beta sandwich fold, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.20.1.3
Probab=93.60 E-value=0.087 Score=33.10 Aligned_cols=24 Identities=17% Similarity=0.379 Sum_probs=21.9
Q ss_pred EEEEEEEcCCCCCCCCCeEEEecC
Q 045947 49 VFLVSIHFPPDYPFKPPKVAFRTK 72 (101)
Q Consensus 49 ~~~~~i~fp~~YP~~pP~v~f~t~ 72 (101)
.+.++|.+|.+||..+|.|...+.
T Consensus 76 ~i~L~v~lP~~YP~~~P~i~l~~~ 99 (154)
T 2daw_A 76 KIDLQVTMPHSYPYLALQLFGRSS 99 (154)
T ss_dssp EEEEEEEECSSTTSSCCEEEEECS
T ss_pred eEEEEEEcCCCCCCCCCcEEEEeC
Confidence 789999999999999999988765
No 63
>3zqs_A E3 ubiquitin-protein ligase fancl; HET: P6G; 2.00A {Homo sapiens}
Probab=91.93 E-value=1 Score=29.34 Aligned_cols=58 Identities=12% Similarity=0.168 Sum_probs=43.0
Q ss_pred HHHHHHHHHhhcCCCCCe-eEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecC
Q 045947 4 KRINKELKDLQKDPPASC-SAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTK 72 (101)
Q Consensus 4 ~RL~~E~~~l~~~~~~~~-~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~ 72 (101)
.+|.+|+.++ |. .+...+.++....+.+... .|..+.++|.++.+||.++|.+...-|
T Consensus 4 ~~li~Ei~~i------GW~~l~~id~~~~~i~l~~~D~-----~gR~H~l~v~l~~~yp~~~P~~~~DlP 62 (186)
T 3zqs_A 4 SSLIEEIGTL------GWDKLVYADTCFSTIKLKAEDA-----SGREHLITLKLKAKYPAESPDYFVDFP 62 (186)
T ss_dssp CSHHHHHHHH------CGGGEEEECTTSSEEEEEEECT-----TSCEEEEEEECCTTTTTSCCEEECCCS
T ss_pred HHHHHHHHHh------CCceeeeecCCccEEEEEEEeC-----CCCeEEEEEEECCCCCCCCCeeEEcCC
Confidence 3678888876 22 2333466788888888732 368899999999999999998766555
No 64
>3u3c_B Paxillin LD2 peptide; 4-helix bundle, focal adhesion, tyrosine kinase, transferase-signaling protein complex; 3.70A {Homo sapiens}
Probab=77.47 E-value=2 Score=18.30 Aligned_cols=19 Identities=32% Similarity=0.574 Sum_probs=15.7
Q ss_pred HHHHHHHHHHhhcCCCCCe
Q 045947 3 SKRINKELKDLQKDPPASC 21 (101)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~ 21 (101)
..||.-|+...+.+++.|.
T Consensus 7 ldrlllelnavqhnppsg~ 25 (26)
T 3u3c_B 7 LDRLLLELNAVQHNPPSGX 25 (26)
T ss_pred HHHHHHHHhhhccCCCCCC
Confidence 4689999999998888774
No 65
>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*
Probab=62.70 E-value=8.2 Score=25.39 Aligned_cols=27 Identities=19% Similarity=0.368 Sum_probs=23.1
Q ss_pred CCCcEEEEEEEcCCCCCC-----CCCeEEEec
Q 045947 45 FAGGVFLVSIHFPPDYPF-----KPPKVAFRT 71 (101)
Q Consensus 45 y~g~~~~~~i~fp~~YP~-----~pP~v~f~t 71 (101)
-+.|.|.|+-.+|-.||. .||.|+|.-
T Consensus 108 d~~G~y~F~TI~Pg~yp~~~G~~R~~HIH~~V 139 (209)
T 2bum_A 108 FGTGFWSFNTIKPGAVPGRKGSTQAPHISLII 139 (209)
T ss_dssp TTTCCEEEEEECCCCCBCSTTCBCCCCEEEEE
T ss_pred CCCcEEEEEEEccCcccCCCCCccCcEEEEEE
Confidence 356889999999999998 899998863
No 66
>3pft_A Flavin reductase; desulfurization, oxidoreductase; HET: FMN; 1.60A {Mycobacterium goodii} SCOP: b.45.1.0
Probab=47.89 E-value=10 Score=23.37 Aligned_cols=67 Identities=21% Similarity=0.306 Sum_probs=39.9
Q ss_pred HHHHHhhcCCCCCeeEEecCCCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEe---cCCccccccCCCcE
Q 045947 8 KELKDLQKDPPASCSAGPVADDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFR---TKVFHPNINSNGSI 84 (101)
Q Consensus 8 ~E~~~l~~~~~~~~~~~~~~~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~---t~i~HPnv~~~G~i 84 (101)
+++++.+..-+.++.+....++- ..++...+ + ...+. .+||.|.+. +.--|++|..+|..
T Consensus 5 ~~fr~a~~~~p~~V~vVTt~~~g-~~~g~t~s---~-------~~svs------~~PP~v~v~i~~~~~t~~~i~~~~~F 67 (157)
T 3pft_A 5 TSLREAFGHFPSGVIAIAAEVDG-TRVGLAAS---T-------FVPVS------LEPPLVAFAVQNSSTTWPKLKDLPSL 67 (157)
T ss_dssp HHHHHHHHTSCBCCEEEEEEETT-EEEEEEES---C-------CEEEE------TTTTEEEEEEETTCSSHHHHTTSSCE
T ss_pred HHHHHHHHhCCCceEEEEEeeCC-EEEEEEee---e-------EeEEE------CCCcEEEEEECCCCchHHHHHhCCEE
Confidence 56777777777787664332211 11111110 0 01222 368888775 34568999999999
Q ss_pred eccCCCC
Q 045947 85 CLDILKE 91 (101)
Q Consensus 85 Cl~~l~~ 91 (101)
|+++|.+
T Consensus 68 ~Vnvl~~ 74 (157)
T 3pft_A 68 GISVLGE 74 (157)
T ss_dssp EEEECBT
T ss_pred EEEECCH
Confidence 9999963
No 67
>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...
Probab=44.83 E-value=14 Score=24.78 Aligned_cols=25 Identities=20% Similarity=0.480 Sum_probs=22.2
Q ss_pred CCcEEEEEEEcCCCCCC-------CCCeEEEe
Q 045947 46 AGGVFLVSIHFPPDYPF-------KPPKVAFR 70 (101)
Q Consensus 46 ~g~~~~~~i~fp~~YP~-------~pP~v~f~ 70 (101)
+.|.|.|+-.+|-.||. .||.|+|.
T Consensus 133 ~~G~y~F~TI~Pg~Yp~p~~~~~~Rp~HIHf~ 164 (238)
T 3t63_M 133 SDGYYSFRTIKPGPAPWRNGPNDWRPAHIYFG 164 (238)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEE
T ss_pred CCceEEEEEECCcCccCCCCCCCCcCCeEEEE
Confidence 46889999999999996 79999987
No 68
>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*
Probab=44.78 E-value=14 Score=24.79 Aligned_cols=26 Identities=23% Similarity=0.636 Sum_probs=22.3
Q ss_pred CCcEEEEEEEcCCCCC-------CCCCeEEEec
Q 045947 46 AGGVFLVSIHFPPDYP-------FKPPKVAFRT 71 (101)
Q Consensus 46 ~g~~~~~~i~fp~~YP-------~~pP~v~f~t 71 (101)
+.|.|.|+-.+|-.|| ..||.|+|.-
T Consensus 134 ~~G~y~F~TI~Pg~Yp~~~~~~~~RpaHIH~~V 166 (241)
T 2bum_B 134 DNGYYVFRTIKPGPYPWRNRINEWRPAHIHFSL 166 (241)
T ss_dssp TTSEEEEEEECCCCEEESSSTTEEECSEEEEEE
T ss_pred CCceEEEEEecCCccccCCCCCCCcCceEEEEE
Confidence 5688999999999998 4799998863
No 69
>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*
Probab=42.01 E-value=16 Score=25.54 Aligned_cols=25 Identities=20% Similarity=0.478 Sum_probs=21.3
Q ss_pred CCcEEEEEEEcCCCCC------------------CCCCeEEEe
Q 045947 46 AGGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (101)
Q Consensus 46 ~g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (101)
+.|.|.|+-.+|-.|| ..||.|.|.
T Consensus 187 ~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~grh~~RpaHIH~~ 229 (312)
T 2xsu_A 187 VNGKYVALTTMPVGYGCPPEGTTQALLNKLGRHGNRPSHVHYF 229 (312)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECcCcccCCCCCcHHHHHHHhhccCCCCceEEEE
Confidence 4688999999999998 568898886
No 70
>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...
Probab=42.00 E-value=18 Score=23.59 Aligned_cols=23 Identities=13% Similarity=0.182 Sum_probs=21.0
Q ss_pred cEEEEEEEcCCCCCCC-----CCeEEEe
Q 045947 48 GVFLVSIHFPPDYPFK-----PPKVAFR 70 (101)
Q Consensus 48 ~~~~~~i~fp~~YP~~-----pP~v~f~ 70 (101)
|.|.|+-.+|-.||.. ||.|+|.
T Consensus 102 G~~~F~TI~Pg~Y~~~~g~~rp~HIH~~ 129 (200)
T 3t63_A 102 GEWTLHTVKPGVVNNAAGVPMAPHINIS 129 (200)
T ss_dssp CSEEEEEECCCCEECTTSCEECSCEEEE
T ss_pred CEEEEEEECCcCcCCCCCCccCCEEEEE
Confidence 8899999999999987 8888886
No 71
>3s7v_A Major capsid protein VP1; jelly-roll, antiparallel beta sandwich, major capsid protein protein; 2.55A {Ki polyomavirus} PDB: 3s7x_A
Probab=41.93 E-value=70 Score=21.82 Aligned_cols=45 Identities=22% Similarity=0.393 Sum_probs=32.4
Q ss_pred CCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCCCc--Eec
Q 045947 39 GPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (101)
Q Consensus 39 gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~--iCl 86 (101)
.|+-+-=|+.+|..++.=.. ..||.+.|....-.+.+|++|. +|.
T Consensus 193 ~pDPskNENtRYFG~~tGG~---~TPPVl~ftNt~TTvLLDENGVGpLCk 239 (277)
T 3s7v_A 193 APDPSRNDNCRYFGRVVGGA---ATPPVVSYGNNSTIPLLDENGIGILCL 239 (277)
T ss_dssp EECTTSCCSEEEEEEEECCS---SCCCEEEEESSCCEECCCTTSCCEECT
T ss_pred CCCCCcCcCceeeEEecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 35555566677777666433 3589999999888899998764 776
No 72
>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}
Probab=41.36 E-value=17 Score=25.44 Aligned_cols=25 Identities=28% Similarity=0.460 Sum_probs=21.4
Q ss_pred CCcEEEEEEEcCCCCC------------------CCCCeEEEe
Q 045947 46 AGGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (101)
Q Consensus 46 ~g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (101)
+.|.|.|+-.+|-.|| ..||.|+|.
T Consensus 183 ~~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~grh~~RpaHIHf~ 225 (311)
T 2azq_A 183 AEGRYRARSIVPSGYGCDPQGPTQECLDLLGRHGQRPAHVHFF 225 (311)
T ss_dssp TTCEEEEEEECCCCEECCTTSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEEcCCCcCCCCCCcHHHHHHhhhccCCCCceEEEE
Confidence 4688999999999998 469999986
No 73
>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}
Probab=40.95 E-value=17 Score=25.16 Aligned_cols=26 Identities=19% Similarity=0.364 Sum_probs=21.9
Q ss_pred CCCcEEEEEEEcCCCCC------------------CCCCeEEEe
Q 045947 45 FAGGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (101)
Q Consensus 45 y~g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (101)
-+.|.|.|+-.+|-.|| ..||.|+|.
T Consensus 182 D~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 225 (293)
T 1tmx_A 182 GPDGGYAFWAITPTPYPIPHDGPVGRMLAATGRSPMRASHLHFM 225 (293)
T ss_dssp CTTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCCceEEEEEECCCcccCCCCCchHHHHHhcccCCCCCceEEEE
Confidence 35788999999999998 459999886
No 74
>3rls_A YAF9, protein AF-9 homolog; yeats domain, histone, transcription; 1.70A {Saccharomyces cerevisiae} PDB: 3fk3_A
Probab=40.38 E-value=71 Score=20.41 Aligned_cols=43 Identities=16% Similarity=0.332 Sum_probs=30.7
Q ss_pred CCcceeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecC
Q 045947 28 DDMFHWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTK 72 (101)
Q Consensus 28 ~~~~~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~ 72 (101)
+.-.+|.+-+.|+.+.-...-.=++...+.+.||. |.-.+..+
T Consensus 30 ~~TH~WtVyVr~~~~edis~~v~KV~F~LHpSF~n--p~Rvv~~P 72 (175)
T 3rls_A 30 EHTHLWTIFVRGPQNEDISYFIKKVVFKLHDTYPN--PVRSIEAP 72 (175)
T ss_dssp TCCEEEEEEEECGGGCCCTTTEEEEEEECCTTSSS--CEEEECSS
T ss_pred CCcEEEEEEEECCCCCChhheEEEEEEEcCCCCCC--CcEEEeCC
Confidence 35679999999887654445567788889999974 55555544
No 75
>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}
Probab=39.81 E-value=19 Score=24.97 Aligned_cols=25 Identities=28% Similarity=0.683 Sum_probs=21.5
Q ss_pred CCcEEEEEEEcCCCCCC------------------CCCeEEEe
Q 045947 46 AGGVFLVSIHFPPDYPF------------------KPPKVAFR 70 (101)
Q Consensus 46 ~g~~~~~~i~fp~~YP~------------------~pP~v~f~ 70 (101)
+.|.|.|+-.+|-.||. .||.|+|.
T Consensus 180 ~~G~y~F~TI~Pg~Yp~p~dGp~G~ll~~~grh~~RpaHIHf~ 222 (290)
T 3n9t_A 180 NDGCFAIQTTVPVCYPIPTDGPVGEMLDAANRHAWRPAHLHFM 222 (290)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHHTCCCEECCEEEEE
T ss_pred CCceEEEEEeCCCCcCCCCCCcHHHHHHhccCCCCcCceEEEE
Confidence 46889999999999994 58999886
No 76
>3g9r_A Fusion complex of HIV-1 envelope glycoprotein and saccharomyces cerevisiae general...; GP41, MPER, membrane fusion, AIDS; 2.00A {Human immunodeficiency virus 1}
Probab=39.02 E-value=22 Score=17.05 Aligned_cols=12 Identities=42% Similarity=0.706 Sum_probs=9.9
Q ss_pred HHHHHHHHHHhh
Q 045947 3 SKRINKELKDLQ 14 (101)
Q Consensus 3 ~~RL~~E~~~l~ 14 (101)
.+|+..|++++.
T Consensus 30 ~~~~~~~~~~~~ 41 (42)
T 3g9r_A 30 IKRIENEIKRIK 41 (42)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHhc
Confidence 589999998875
No 77
>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}
Probab=38.39 E-value=20 Score=24.25 Aligned_cols=25 Identities=20% Similarity=0.549 Sum_probs=20.9
Q ss_pred CCcEEEEEEEcCCCCC------------------CCCCeEEEe
Q 045947 46 AGGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (101)
Q Consensus 46 ~g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (101)
+.|.|.|+-.+|-.|| ..||.|+|.
T Consensus 153 ~~G~y~F~TI~Pg~Y~~p~dGp~G~ll~~~grh~~RpaHIH~~ 195 (254)
T 2boy_A 153 ENGRFTLRTIVPAPYEIPKNGPTGALLAAAGWHAWRPAHLHWI 195 (254)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECCEEEEE
T ss_pred CCceEEEEEECCccccCCCCCcHHHHHHhcccccCCCceEEEE
Confidence 4588999999999887 468999886
No 78
>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*
Probab=37.72 E-value=21 Score=24.96 Aligned_cols=25 Identities=20% Similarity=0.498 Sum_probs=21.3
Q ss_pred CCcEEEEEEEcCCCCC------------------CCCCeEEEe
Q 045947 46 AGGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (101)
Q Consensus 46 ~g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (101)
+.|.|.|+-.+|-.|| ..||.|+|.
T Consensus 186 ~~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~~grh~~RpaHIHf~ 228 (311)
T 1dmh_A 186 ENGQYRVRTILPAGYGCPPEGPTQQLLNQLGRHGNRPAHIHYF 228 (311)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHHTTCCCEECSEEEEE
T ss_pred CCceEEEEEEcCCcccCCCCCcHHHHHHhcccCCCCCceEEEE
Confidence 4588999999999997 469999886
No 79
>1sid_A Polyomavirus coat protein VP1; icosahedral virus; HET: SIA GAL BGC; 3.65A {Mouse polyomavirus} SCOP: b.121.6.1 PDB: 1sie_A*
Probab=36.03 E-value=80 Score=22.55 Aligned_cols=44 Identities=16% Similarity=0.310 Sum_probs=29.4
Q ss_pred CCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCCCc--Eec
Q 045947 40 PSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (101)
Q Consensus 40 p~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~--iCl 86 (101)
|+-+-=|+.+|..++.=.. ..||.+.|....-.+.+|++|. +|.
T Consensus 229 PDPskNENtRYFG~~tGG~---~TPPVlqftNt~TTvLLDENGVGpLCk 274 (383)
T 1sid_A 229 PDPAKNENTRYFGNYTGGT---TTPPVLQFTNTLTTVLLDENGVGPLCK 274 (383)
T ss_dssp ECCCSSCSEEEEEEEECCS---SCCCEEEEESSCEEECCCTTSCCCBCS
T ss_pred CCCCcCcCceeeEEecCCC---CCCCeEEeccceeEEEEcCCCcccccc
Confidence 4444445555555555332 2489999998888899998764 775
No 80
>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*
Probab=35.94 E-value=21 Score=24.61 Aligned_cols=25 Identities=16% Similarity=0.474 Sum_probs=20.7
Q ss_pred CCcEEEEEEEcCCCCC------------------CCCCeEEEe
Q 045947 46 AGGVFLVSIHFPPDYP------------------FKPPKVAFR 70 (101)
Q Consensus 46 ~g~~~~~~i~fp~~YP------------------~~pP~v~f~ 70 (101)
+.|.|.|+-.+|-.|| ..||.|+|.
T Consensus 182 ~dG~y~F~TI~Pg~Yp~p~dGp~G~lL~~~grh~~RpaHIH~~ 224 (280)
T 3hhy_A 182 EEGRYEITTIQPAPYQIPTDGPTGQFIEAQNGHPWRPAHLHLI 224 (280)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCCEECSCEEEE
T ss_pred CCceEEEEEECCcCcCCCCCCcHHHHHHhcCCCCCCCcEEEEE
Confidence 3588999999998887 468988886
No 81
>2cu9_A Spcia1, histone chaperone CIA1; immunoglobulin fold, structural genomics, NPPSFA; 1.80A {Schizosaccharomyces pombe} SCOP: b.1.22.1 PDB: 2dze_A* 2z34_A 2z3f_A
Probab=35.41 E-value=68 Score=20.24 Aligned_cols=36 Identities=19% Similarity=0.266 Sum_probs=24.3
Q ss_pred CcceeEEEEeCCCCC-------------CCCCcEEEEEEEcCCCCCCCC
Q 045947 29 DMFHWQATIMGPSDS-------------PFAGGVFLVSIHFPPDYPFKP 64 (101)
Q Consensus 29 ~~~~w~~~i~gp~~t-------------py~g~~~~~~i~fp~~YP~~p 64 (101)
+-.+|+++..|..++ |..-|.++|.++-+.=-+..-
T Consensus 36 ~dlewkliYVgSa~s~~~DQ~Ld~v~VGPi~~G~~kFv~~adpPd~~~I 84 (161)
T 2cu9_A 36 SDLEWKLTYVGSATSQSYDQILDTLLVGPIPIGINKFVFEADPPNIDLL 84 (161)
T ss_dssp SCEEEEEEEESSTTSCCCEEEEEEEEECSCCSEEEEEEEEECCCCGGGS
T ss_pred CCeEEEEEEEcCCCCccCCeEeeEEEECCccceEEEEEEEcCCCChhHC
Confidence 345999999885544 777888888888743333333
No 82
>1vps_A Polyomavirus VP1 pentamer; virus coat protein, oligosaccharide binding, virus assembly, acid, viral protein; HET: SIA GAL NAG; 1.90A {Murine polyomavirus} SCOP: b.121.6.1 PDB: 1vpn_A* 1cn3_A
Probab=34.61 E-value=1.1e+02 Score=20.99 Aligned_cols=44 Identities=16% Similarity=0.310 Sum_probs=32.0
Q ss_pred CCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCCCc--Eec
Q 045947 40 PSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (101)
Q Consensus 40 p~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~--iCl 86 (101)
|+-+-=|+.+|..++.=.. ..||.+.|....-.+.+|++|. +|.
T Consensus 198 PDPskNENtRYFG~~tGG~---~TPpvl~ftNt~TtvLldEnGvGpLCk 243 (289)
T 1vps_A 198 PDPAKNENTRYFGNYTGGT---TTPPVLQFTNTLTTVLLDENGVGPLCK 243 (289)
T ss_dssp ECTTSCTTEEEEEEEECCS---SCCCEEEEESSCCEECCCTTSCCCEES
T ss_pred CCCCcCcCceeeeeecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 5555566777777666543 3589999998888899998764 776
No 83
>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}
Probab=34.39 E-value=40 Score=22.90 Aligned_cols=25 Identities=28% Similarity=0.685 Sum_probs=19.9
Q ss_pred CCcEEEEEEEcCCCC------------------CCCCCeEEEe
Q 045947 46 AGGVFLVSIHFPPDY------------------PFKPPKVAFR 70 (101)
Q Consensus 46 ~g~~~~~~i~fp~~Y------------------P~~pP~v~f~ 70 (101)
+.|.|.|+=.+|-.| |..||.|+|.
T Consensus 150 ~~G~y~F~TI~P~~Ypip~dGp~g~ll~~~gr~~~RpaHIHf~ 192 (260)
T 3th1_A 150 SQGNYRVRTTMPVPYQIPYEGPTGRLLGHLGSHTWRPAHVHFK 192 (260)
T ss_dssp TTSEEEEEEECCCCEECCCSSHHHHHHHHTTCCSEECCEEEEE
T ss_pred CCCEEEEEEECCCCCCCCCCCcHHHHHHhcCCCCCCCCeEEEE
Confidence 457899999999766 4577888886
No 84
>4fmh_A VP1; viral capsid protein, jelly roll, encapsidation, receptor BI sialylated oligosaccharides, viral protein; HET: SIA GAL; 1.85A {Merkel cell polyomavirus} PDB: 4fmg_A* 4fmi_A* 4fmj_A*
Probab=33.70 E-value=97 Score=21.33 Aligned_cols=61 Identities=20% Similarity=0.320 Sum_probs=41.5
Q ss_pred CCCeeEEecCCCcc---eeEEEEeCCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCCCc--Eec
Q 045947 18 PASCSAGPVADDMF---HWQATIMGPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (101)
Q Consensus 18 ~~~~~~~~~~~~~~---~w~~~i~gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~--iCl 86 (101)
.+..++..+.+..+ .| .|+-+-=|+.+|..++.=.. ..||.+.|....-.+..|++|. +|.
T Consensus 182 ~p~~Ka~ldkdg~yPVE~W-----~PDPsrNENtRYFG~~tGG~---~TPPVl~ftNt~TTvLLDENGVGpLCk 247 (289)
T 4fmh_A 182 DPQAKAKLDKDGNYPIEVW-----CPDPSKNENSRYYGSIQTGS---QTPTVLQFSNTLTTVLLDENGVGPLCK 247 (289)
T ss_dssp CTTCEEEECSTTCSBTTTE-----EECTTSCTTEEEEEEEECSS---SCCCEEEEETTCCEECCCTTSCCCBCG
T ss_pred CchhheeeccCCccceEEE-----CCCCCcCcCceeeeEecCCC---CCCCeEEecCceeEEEEcCCCccccee
Confidence 34556665555332 34 45556667778887777543 3589999998888889998864 676
No 85
>2ecu_A Flavin reductase (HPAC) of 4-hydroxyphenylacetate monooxygnease; flavin diffusible, two-component monooxyge oxidoreductase; HET: 1PG 12P; 1.30A {Thermus thermophilus} PDB: 2ecr_A* 2ed4_A*
Probab=32.86 E-value=9.3 Score=23.28 Aligned_cols=30 Identities=27% Similarity=0.568 Sum_probs=23.8
Q ss_pred CCCeEEEe---cCCccccccCCCcEeccCCCCC
Q 045947 63 KPPKVAFR---TKVFHPNINSNGSICLDILKEQ 92 (101)
Q Consensus 63 ~pP~v~f~---t~i~HPnv~~~G~iCl~~l~~~ 92 (101)
+||.|.+. +.--|++|..+|..|+++|.++
T Consensus 41 ~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~ 73 (149)
T 2ecu_A 41 EPPLVALAVSERAKLLPVLEGAGAFTVSLLREG 73 (149)
T ss_dssp TTTEEEEEEETTCTHHHHHHHHTEEEEEECBTT
T ss_pred CCCEEEEEECCCChhHHHHHhCCEEEEEECcHH
Confidence 68888776 3345889999999999999643
No 86
>3qrl_A Transcription initiation factor TFIID subunit 14; yeats domain, IG fold, nucleus, nuclear protein; HET: PGE; 1.70A {Saccharomyces cerevisiae} PDB: 2l7e_A
Probab=32.31 E-value=89 Score=19.20 Aligned_cols=43 Identities=16% Similarity=0.355 Sum_probs=31.7
Q ss_pred cceeE--EEEeCCCCCCCC-CcEEEEEEEcCCCCCCCCCeEEEecCCc
Q 045947 30 MFHWQ--ATIMGPSDSPFA-GGVFLVSIHFPPDYPFKPPKVAFRTKVF 74 (101)
Q Consensus 30 ~~~w~--~~i~gp~~tpy~-g~~~~~~i~fp~~YP~~pP~v~f~t~i~ 74 (101)
..+|. +.+.|+.+.... .-.=++...+.+.|+ .|...+..+.|
T Consensus 32 ~h~WtieV~vr~~~g~ei~~~~i~kV~f~LH~sF~--np~r~v~~pPF 77 (140)
T 3qrl_A 32 VRQWSIEIVLLDDEGKEIPATIFDKVIYHLHPTFA--NPNRTFTDPPF 77 (140)
T ss_dssp CEEEEEEEEEECTTSCEECCTTEEEEEEECCTTSS--SCEEEECSTTC
T ss_pred ccEeeEEEEEeCCCCCcCchheEEEEEEEeCCCCC--CCeEEEcCCCc
Confidence 46998 788898887654 456678888889888 47777776644
No 87
>3nxg_A Major capsid protein VP1; beta-sandwich jelly roll, viral protein; 1.95A {Jc polyomavirus} PDB: 3nxd_C 3bwr_A* 3bwq_A*
Probab=31.40 E-value=76 Score=21.62 Aligned_cols=45 Identities=11% Similarity=0.174 Sum_probs=33.1
Q ss_pred CCCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCCCc--Eec
Q 045947 39 GPSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (101)
Q Consensus 39 gp~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~--iCl 86 (101)
.|+-+-=|+.+|..++.=.. ..||.+.|....-.+.+|++|. +|.
T Consensus 184 ~pDPskNENtRYfG~~tGG~---~TPPVlqftNt~TTvLLDENGVGpLCk 230 (272)
T 3nxg_A 184 VPDPTRNENTRYFGTLTGGE---NVPPVLHITNTATTVLLDEFGVGPLCK 230 (272)
T ss_dssp EECTTSCTTEEEEEEEECST---TCCCEEEEESSCCEECCCTTSCCCBCG
T ss_pred CCCCCcCcCceeEEEecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 35555667777777776533 3589999998888899998864 775
No 88
>1sva_1 Simian virus 40; virus coat protein, icosahedral virus; 3.10A {Simian virus 40} SCOP: b.121.6.1
Probab=30.93 E-value=70 Score=22.70 Aligned_cols=44 Identities=14% Similarity=0.212 Sum_probs=30.8
Q ss_pred CCCCCCCCcEEEEEEEcCCCCCCCCCeEEEecCCccccccCCCc--Eec
Q 045947 40 PSDSPFAGGVFLVSIHFPPDYPFKPPKVAFRTKVFHPNINSNGS--ICL 86 (101)
Q Consensus 40 p~~tpy~g~~~~~~i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~--iCl 86 (101)
|+-+-=|+.+|..++.=.. ..||.+.|....-.+.+|++|. +|.
T Consensus 210 pDPskNENtRYFG~~tGG~---~TPPVlqftNt~TTvLLDENGVGpLCk 255 (361)
T 1sva_1 210 PDPSKNENTRYFGTYTGGE---NVPPVLHITNTATTVLLDEQGVGPLCK 255 (361)
T ss_dssp ECTTTCTTEEEEEEEECCS---SCCCEEEEETTCCEECCCTTSCCCBCS
T ss_pred CCCCcCcCceeeEEecCCC---CCCCeEEecCceeEEEEcCCCcccccc
Confidence 4445556666666665432 3589999998888899998764 665
No 89
>4dac_A Computationally designed crystal forming protein; alpha-helix, three-helix bundle, coiled-coil protein, DE NOV computational protein design; 2.10A {Synthetic}
Probab=30.30 E-value=29 Score=14.86 Aligned_cols=14 Identities=36% Similarity=0.546 Sum_probs=10.2
Q ss_pred hHHHHHHHHHHhhc
Q 045947 2 ASKRINKELKDLQK 15 (101)
Q Consensus 2 a~~RL~~E~~~l~~ 15 (101)
..+||.+|.-.+..
T Consensus 9 nvkrlekevgkleg 22 (28)
T 4dac_A 9 NVKRLEKEVGKLEG 22 (28)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred cHHHHHHHHhhhhh
Confidence 35899999877653
No 90
>2c5k_P Vacuolar protein sorting protein 51; protein transport/complex, snare, VFT complex, protein transport, phosphorylation; 2.05A {Saccharomyces cerevisiae}
Probab=29.92 E-value=28 Score=15.08 Aligned_cols=12 Identities=17% Similarity=0.423 Sum_probs=7.6
Q ss_pred HHHHHHHHHhhc
Q 045947 4 KRINKELKDLQK 15 (101)
Q Consensus 4 ~RL~~E~~~l~~ 15 (101)
|++++||-.|+.
T Consensus 13 R~lLkeyY~L~~ 24 (26)
T 2c5k_P 13 RLLLREFYNLEN 24 (26)
T ss_dssp HHHHHHHHHC--
T ss_pred HHHHHHHHhhhc
Confidence 567888877754
No 91
>2jrw_A Cyclic extended PEP.1; acetylcholine receptor, phage display, peptide cyclization, immune system; NMR {Synthetic}
Probab=29.81 E-value=11 Score=15.91 Aligned_cols=13 Identities=31% Similarity=0.728 Sum_probs=6.3
Q ss_pred CCeEEEecCCccc
Q 045947 64 PPKVAFRTKVFHP 76 (101)
Q Consensus 64 pP~v~f~t~i~HP 76 (101)
-|.-.|....|||
T Consensus 7 lpenyfserpyhp 19 (26)
T 2jrw_A 7 LPENYFSERPYHP 19 (26)
T ss_dssp CSSSSCCSSSCCS
T ss_pred cchhhcccCCCCC
Confidence 3333455555565
No 92
>2qck_A Flavin reductase domain protein; YP_831077.1, flavin reducta domain, structural genomics, joint center for structural GE JCSG; 1.90A {Arthrobacter SP}
Probab=29.45 E-value=14 Score=23.06 Aligned_cols=29 Identities=24% Similarity=0.487 Sum_probs=23.4
Q ss_pred CCCeEEEe---cCCccccccCCCcEeccCCCC
Q 045947 63 KPPKVAFR---TKVFHPNINSNGSICLDILKE 91 (101)
Q Consensus 63 ~pP~v~f~---t~i~HPnv~~~G~iCl~~l~~ 91 (101)
+||.|.+. +.--|++|..+|..|+++|.+
T Consensus 49 ~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 80 (167)
T 2qck_A 49 QPPRFTFNMARSSSSWPAIANTTHIGVHMLGL 80 (167)
T ss_dssp TTEEEEEEEETTSTTHHHHHHCCEEEEEECBG
T ss_pred CCCEEEEEECCCCchHHHHHhCCeEEEEECcH
Confidence 68888776 345689999999999999964
No 93
>2r0x_A Possible flavin reductase; split barrel-like, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE SO4; 1.06A {Haemophilus somnus 129PT}
Probab=29.39 E-value=11 Score=23.10 Aligned_cols=29 Identities=14% Similarity=0.212 Sum_probs=23.0
Q ss_pred CCCeEEEe---cCCccccccCCCcEeccCCCC
Q 045947 63 KPPKVAFR---TKVFHPNINSNGSICLDILKE 91 (101)
Q Consensus 63 ~pP~v~f~---t~i~HPnv~~~G~iCl~~l~~ 91 (101)
+||.|.+. +.--|++|..+|..|+++|.+
T Consensus 44 ~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 75 (158)
T 2r0x_A 44 SPPTLLVCINSNARAYEHFVKNRVLMVNTLTA 75 (158)
T ss_dssp TTEEEEEEEETTSTTHHHHHHHCEEEEEECBT
T ss_pred CCCEEEEEeCCCChHHHHHHhCCEEEEEeCCH
Confidence 67887775 345588999999999999964
No 94
>2ccv_A Helix pomatia agglutinin; lectin, snail; HET: A2G NAG; 1.30A {Helix pomatia} SCOP: b.154.1.1 PDB: 2cgy_A* 2cgz_A* 2ce6_A
Probab=28.81 E-value=80 Score=17.99 Aligned_cols=24 Identities=25% Similarity=0.350 Sum_probs=19.3
Q ss_pred CcEEEEEEEcCCCCCCCCCeEEEec
Q 045947 47 GGVFLVSIHFPPDYPFKPPKVAFRT 71 (101)
Q Consensus 47 g~~~~~~i~fp~~YP~~pP~v~f~t 71 (101)
+..+...+.|+..|+. +|+|.+.-
T Consensus 28 ~R~~~~~V~F~~~F~~-~P~V~v~l 51 (101)
T 2ccv_A 28 TRELAKNITFASPYCR-PPVVLLSI 51 (101)
T ss_dssp CEEEEEEEECSSCCSS-CCEEEEEE
T ss_pred ceEEEEEeEeCcccCC-CCEEEEEe
Confidence 3468889999999995 99988753
No 95
>4hx6_A Oxidoreductase; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomics, MCSG; HET: MSE; 1.89A {Streptomyces globisporus}
Probab=28.76 E-value=13 Score=23.62 Aligned_cols=29 Identities=21% Similarity=0.441 Sum_probs=23.0
Q ss_pred CCCeEEEe---cCCccccccCCCcEeccCCCC
Q 045947 63 KPPKVAFR---TKVFHPNINSNGSICLDILKE 91 (101)
Q Consensus 63 ~pP~v~f~---t~i~HPnv~~~G~iCl~~l~~ 91 (101)
+||.|.+. +.--|.||..+|..|+++|.+
T Consensus 58 ~PPlv~v~i~~~~~T~~~i~~~g~F~Vnvl~~ 89 (185)
T 4hx6_A 58 SPPLVLICVGKDAVMHQRLTALPTFAVSVLEA 89 (185)
T ss_dssp TTTEEEEEEETTSHHHHHHHHSCEEEEEECBT
T ss_pred CCCEEEEEECCCcHHHHHHHHCCeEEEEECCH
Confidence 68888875 234588999999999999964
No 96
>1m46_B IQ4, IQ4 motif from MYO2P, A class V myosin; protein-peptide complex, myosin light chain, cell cycle protein; 2.10A {Saccharomyces cerevisiae}
Probab=28.66 E-value=41 Score=14.15 Aligned_cols=10 Identities=60% Similarity=0.843 Sum_probs=7.1
Q ss_pred HHHHHHHHHH
Q 045947 3 SKRINKELKD 12 (101)
Q Consensus 3 ~~RL~~E~~~ 12 (101)
++.|.+|+++
T Consensus 10 qkkirkelkq 19 (26)
T 1m46_B 10 QKKIRKELKQ 19 (26)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 4677888765
No 97
>2d37_A Hypothetical NADH-dependent FMN oxidoreductase; flavin reductase; HET: FMN NAD; 1.70A {Sulfolobus tokodaii} PDB: 2d36_A* 2d38_A*
Probab=28.31 E-value=22 Score=22.30 Aligned_cols=29 Identities=17% Similarity=0.240 Sum_probs=23.3
Q ss_pred CCCCeEEEe---cCCccccccCCCcEeccCCC
Q 045947 62 FKPPKVAFR---TKVFHPNINSNGSICLDILK 90 (101)
Q Consensus 62 ~~pP~v~f~---t~i~HPnv~~~G~iCl~~l~ 90 (101)
.+||.|.+. +.--|++|..+|..|+++|.
T Consensus 60 ~~PPlv~v~i~~~~~T~~~i~~sg~F~Vnvl~ 91 (176)
T 2d37_A 60 LNPPLVSFFADRMKGNDIPYKESKYFVVNFTD 91 (176)
T ss_dssp TTTTEEEEEEEGGGTTTHHHHTCSEEEEEEEC
T ss_pred CCCCEEEEEECCCchHHHHHHhCCeEEEEchh
Confidence 368988775 34568999999999999885
No 98
>3rco_A Tudor domain-containing protein 7; structural genomics, structural genomics consortium, SGC, HL DNA binding protein; 1.80A {Homo sapiens} PDB: 2lh9_A
Probab=28.09 E-value=34 Score=19.39 Aligned_cols=18 Identities=28% Similarity=0.259 Sum_probs=14.0
Q ss_pred hHHHHHHHHHHhhcCCCC
Q 045947 2 ASKRINKELKDLQKDPPA 19 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~ 19 (101)
..++|++||+.+...+.|
T Consensus 30 tl~~L~~DYr~l~G~~iP 47 (89)
T 3rco_A 30 ALPRLQGEYRSLTGDWIP 47 (89)
T ss_dssp EHHHHHHHHHHHHSSCCC
T ss_pred CHHHHHHHHHHHhCCcCC
Confidence 468999999999876443
No 99
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=27.26 E-value=39 Score=17.00 Aligned_cols=14 Identities=43% Similarity=0.629 Sum_probs=11.3
Q ss_pred HHHHHHHHHHhhcC
Q 045947 3 SKRINKELKDLQKD 16 (101)
Q Consensus 3 ~~RL~~E~~~l~~~ 16 (101)
+.||.+|+..|++.
T Consensus 8 ILRLErEIE~Lqrq 21 (51)
T 2lw9_A 8 ILRLEKEIEDLQRM 21 (51)
T ss_dssp HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHH
Confidence 46899999988864
No 100
>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*
Probab=26.81 E-value=46 Score=22.56 Aligned_cols=25 Identities=20% Similarity=0.391 Sum_probs=20.7
Q ss_pred CCcEEEEEEEcCCCCCC-------------------CCCeEEEe
Q 045947 46 AGGVFLVSIHFPPDYPF-------------------KPPKVAFR 70 (101)
Q Consensus 46 ~g~~~~~~i~fp~~YP~-------------------~pP~v~f~ 70 (101)
+.|.|.|+-.+|-.||. .||.|+|.
T Consensus 155 ~~G~y~F~TI~Pg~Yp~p~dgp~G~ll~a~~grh~~RpaHIHf~ 198 (257)
T 3o5u_A 155 EDGSIEFHSIRPVPYEIPKAGPTGQLMNSYLGRHSWRPAHIHIR 198 (257)
T ss_dssp TTSEEEEEEECCCCEECCTTSHHHHHHHTTTSSCCEECCCEEEE
T ss_pred CCceEEEEEECCCCcCCCCCCchhhhhhhhccCCCCCCceEEEE
Confidence 46889999999999963 67888886
No 101
>1yoa_A Putative flavoprotein; HB8, FAD, structural genomics, riken structura genomics/proteomics initiative, RSGI, unknown function; HET: FAD FMN; 1.90A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1wgb_A*
Probab=24.90 E-value=12 Score=22.87 Aligned_cols=29 Identities=28% Similarity=0.479 Sum_probs=22.5
Q ss_pred CCCeEEEe---cCCccccccCCCcEeccCCCC
Q 045947 63 KPPKVAFR---TKVFHPNINSNGSICLDILKE 91 (101)
Q Consensus 63 ~pP~v~f~---t~i~HPnv~~~G~iCl~~l~~ 91 (101)
+||.|.+. +.--|+||..+|..|+++|.+
T Consensus 42 ~Pp~v~v~i~~~~~t~~~i~~~~~f~Vnvl~~ 73 (159)
T 1yoa_A 42 QPPLVAVGLKRDSHLHALVERTGKLALMTLAH 73 (159)
T ss_dssp TTTEEEEEEESSSHHHHHHHHHCEEEEEECBT
T ss_pred CCCEEEEEECCCCchHHHHHhCCeEEEEECch
Confidence 67887775 234588999999999999964
No 102
>3kxt_A Chromatin protein CREN7; protein-DNA complex, crenarchaea chromatin protein, minor-GR binding, methylation; 1.60A {Sulfolobus solfataricus} PDB: 2jtm_A 3lwh_A* 3lwi_A*
Probab=24.86 E-value=48 Score=17.06 Aligned_cols=11 Identities=36% Similarity=0.857 Sum_probs=8.8
Q ss_pred EEEEcCCCCCC
Q 045947 52 VSIHFPPDYPF 62 (101)
Q Consensus 52 ~~i~fp~~YP~ 62 (101)
|+-.+|++||.
T Consensus 46 fR~k~pddy~~ 56 (56)
T 3kxt_A 46 FRHKLPDDYPI 56 (56)
T ss_dssp EEEECCTTCCC
T ss_pred eeeeCcCcCCC
Confidence 46788999984
No 103
>1ogy_B Diheme cytochrome C NAPB molecule: nitrate reductase; oxidoreductase; HET: MGD HEC; 3.2A {Rhodobacter sphaeroides} SCOP: a.138.1.3
Probab=22.59 E-value=30 Score=21.08 Aligned_cols=32 Identities=22% Similarity=0.567 Sum_probs=21.8
Q ss_pred EEcCCCCCCCCCeEEEecCCccccccCCCcEecc
Q 045947 54 IHFPPDYPFKPPKVAFRTKVFHPNINSNGSICLD 87 (101)
Q Consensus 54 i~fp~~YP~~pP~v~f~t~i~HPnv~~~G~iCl~ 87 (101)
..+..+|+..||.|=-...-| -|+.++.-||+
T Consensus 29 ~~~~R~y~~qPPlIPH~i~gy--~It~~~N~Cls 60 (130)
T 1ogy_B 29 RRVGRNYPEQPPVIPHSIEGY--QLSVNANRCLE 60 (130)
T ss_dssp CCCCCSSTTSCCCBCSCCTTC--CBSSSCBGGGG
T ss_pred cccccccCCCCCCCCccccCc--eecCCCCcCcc
Confidence 467889999999873322222 46677888885
No 104
>1usc_A Putative styrene monooxygenase small component; FMN-binding protein, structural genomics, riken structural genomics/proteomics initiative; HET: FMN; 1.24A {Thermus thermophilus} SCOP: b.45.1.2 PDB: 1usf_A*
Probab=22.19 E-value=13 Score=23.31 Aligned_cols=31 Identities=10% Similarity=0.062 Sum_probs=23.7
Q ss_pred CCCCeEEEec---CCccccccCCCcEeccCCCCC
Q 045947 62 FKPPKVAFRT---KVFHPNINSNGSICLDILKEQ 92 (101)
Q Consensus 62 ~~pP~v~f~t---~i~HPnv~~~G~iCl~~l~~~ 92 (101)
.+||.|.+.- .--|+||..+|..|+++|.++
T Consensus 45 ~~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnil~~~ 78 (178)
T 1usc_A 45 ADPPLFGVSISPKRFTHGLLLKARRFSASFHPFG 78 (178)
T ss_dssp TTTTEEEEEECTTSHHHHHHHHHCEEEEEECBGG
T ss_pred CCCCEEEEEECCCchHHHHHHHCCeEEEEeCCHH
Confidence 3688887762 345889999999999999643
No 105
>3bnk_A Flavoredoxin; protein-FMN complex, electron transport; HET: FMN; 2.05A {Methanosarcina acetivorans}
Probab=21.87 E-value=17 Score=23.09 Aligned_cols=29 Identities=21% Similarity=0.369 Sum_probs=22.7
Q ss_pred CCCeEEEe---cCCccccccCCCcEeccCCCC
Q 045947 63 KPPKVAFR---TKVFHPNINSNGSICLDILKE 91 (101)
Q Consensus 63 ~pP~v~f~---t~i~HPnv~~~G~iCl~~l~~ 91 (101)
+||.|.+. +.--++||..+|..|+++|.+
T Consensus 43 ~PP~v~v~i~~~s~T~~~i~~~~~F~Vnil~~ 74 (196)
T 3bnk_A 43 NPPMLGVGVNKSHYTPEGIAENGSFSVNFPYS 74 (196)
T ss_dssp TTTEEEEEEETTSSHHHHHHHHTEEEEEECBG
T ss_pred CCCEEEEEECCcchHHHHHHHCCeEEEEECCH
Confidence 68887775 234588999999999999864
No 106
>1i0r_A Conserved hypothetical protein; six stranded antiparallel beta-barrel, FMN and NADP+ binding domain, oxidoreductase; HET: FMN; 1.50A {Archaeoglobus fulgidus} SCOP: b.45.1.2 PDB: 1i0s_A*
Probab=21.77 E-value=12 Score=23.24 Aligned_cols=31 Identities=19% Similarity=0.346 Sum_probs=23.7
Q ss_pred CCCeEEEe---cCCccccccCCCcEeccCCCCCC
Q 045947 63 KPPKVAFR---TKVFHPNINSNGSICLDILKEQW 93 (101)
Q Consensus 63 ~pP~v~f~---t~i~HPnv~~~G~iCl~~l~~~W 93 (101)
+||.|.+. +.--|.||..+|..|+++|.++.
T Consensus 38 ~PP~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~~~ 71 (169)
T 1i0r_A 38 KPVQIAVCLNKENDTHNAVKESGAFGVSVLELET 71 (169)
T ss_dssp TTTEEEEEEETTSHHHHHHHHHSEEEEEEEBTTC
T ss_pred CCCEEEEEECCCchhHHHHHhCCEEEEEeCChhH
Confidence 68888775 23448899999999999986543
No 107
>3s93_A Tudor domain-containing protein 5; structural genomics consortium, SGC, transcription; 2.28A {Homo sapiens}
Probab=21.43 E-value=62 Score=18.62 Aligned_cols=18 Identities=11% Similarity=0.134 Sum_probs=13.9
Q ss_pred hHHHHHHHHHHhhcCCCC
Q 045947 2 ASKRINKELKDLQKDPPA 19 (101)
Q Consensus 2 a~~RL~~E~~~l~~~~~~ 19 (101)
...+|++||+.+..++.|
T Consensus 28 tl~~L~~dYr~~~G~~iP 45 (102)
T 3s93_A 28 SPQELEKEYLLMVGNHLP 45 (102)
T ss_dssp CHHHHHHHHHHHHSSCCC
T ss_pred CHHHHHHHHHHHcCCcCC
Confidence 467899999999876443
No 108
>3e4v_A NADH:FMN oxidoreductase like protein; YP_544701.1, structural genomics, joint center for structural genom JCSG; HET: MSE FMN; 1.40A {Methylobacillus flagellatus KT}
Probab=21.22 E-value=19 Score=22.73 Aligned_cols=29 Identities=21% Similarity=0.321 Sum_probs=22.4
Q ss_pred CCCeEEEec---CCccccccCCCcEeccCCCC
Q 045947 63 KPPKVAFRT---KVFHPNINSNGSICLDILKE 91 (101)
Q Consensus 63 ~pP~v~f~t---~i~HPnv~~~G~iCl~~l~~ 91 (101)
+||.|.+.- .--|.||..+|..|+++|.+
T Consensus 46 ~PPlv~v~i~~~~~t~~~i~~~g~F~Vnvl~~ 77 (186)
T 3e4v_A 46 EPPLVGAIIGPWDYSHQALSETGECVLAVPTV 77 (186)
T ss_dssp TTTEEEEECCTTSTHHHHHHHHCEEEEEECCG
T ss_pred CCCEEEEEEcChhHHHHHHHHCCeEEEEeCCH
Confidence 688887752 23478999999999999963
No 109
>3rh7_A Hypothetical oxidoreductase; FMN-binding split barrel, nudix, structural genomics, joint for structural genomics, JCSG; HET: FMN; 3.00A {Sinorhizobium meliloti}
Probab=21.18 E-value=33 Score=23.78 Aligned_cols=29 Identities=21% Similarity=0.408 Sum_probs=23.3
Q ss_pred CCCeEEEe---cCCccccccCCCcEeccCCCC
Q 045947 63 KPPKVAFR---TKVFHPNINSNGSICLDILKE 91 (101)
Q Consensus 63 ~pP~v~f~---t~i~HPnv~~~G~iCl~~l~~ 91 (101)
+||.|.+. +.--|.||..+|..|+++|.+
T Consensus 58 ~PPlv~v~i~~~s~T~~~i~~sg~F~VnvL~~ 89 (321)
T 3rh7_A 58 DPPLLLVCLAKSSRNYESMTSAGRFAINVLSE 89 (321)
T ss_dssp TTTEEEEEEETTCSSHHHHHHCSEEEEEECBT
T ss_pred CCCEEEEEECCcchHHHHHHhCCeEEEEECCH
Confidence 68888775 345688999999999999964
No 110
>2ys2_A Cytoplasmic tyrosine-protein kinase BMX; bone marrow tyrosine kinase gene in chromosome X protein, epithelial and endothelial tyrosine kinase, ETK; NMR {Homo sapiens}
Probab=20.19 E-value=28 Score=17.56 Aligned_cols=16 Identities=19% Similarity=0.584 Sum_probs=11.8
Q ss_pred CCccccccCCCc-Eecc
Q 045947 72 KVFHPNINSNGS-ICLD 87 (101)
Q Consensus 72 ~i~HPnv~~~G~-iCl~ 87 (101)
.-|||.++.+|+ .|-.
T Consensus 13 ~~YHPg~~~~g~W~CC~ 29 (50)
T 2ys2_A 13 VKYHSGFFVDGKFLCCQ 29 (50)
T ss_dssp CCCCSSCEETTEESSSC
T ss_pred hhcCCCcccCCeECCCC
Confidence 458999998776 4553
No 111
>1u9d_A Hypothetical protein VC0714; structural genomics, MCSG, protein STR initiative, PSI, midwest center for structural genomics; 1.70A {Vibrio cholerae o1 biovar eltor str} SCOP: d.80.1.5
Probab=20.16 E-value=1.5e+02 Score=17.62 Aligned_cols=26 Identities=12% Similarity=0.102 Sum_probs=21.2
Q ss_pred HHHHHHHHHHhhcCCCCCeeEEecCC
Q 045947 3 SKRINKELKDLQKDPPASCSAGPVAD 28 (101)
Q Consensus 3 ~~RL~~E~~~l~~~~~~~~~~~~~~~ 28 (101)
.+.|..||.++.+.+...++++....
T Consensus 33 S~~Lid~La~i~~~~~e~fTle~i~s 58 (122)
T 1u9d_A 33 VPTLLNELSSLLSTARNAFTFELINT 58 (122)
T ss_dssp HHHHHHHHHHHHTCCGGGCEEEECCC
T ss_pred hHHHHHHHHHHHCCCcccEEEEEeee
Confidence 36788999999999999998876654
No 112
>3cb0_A 4-hydroxyphenylacetate 3-monooxygenase; corrin reductase, COBR, six-stranded anti-parallel beta- barrel, oxidoreductase; HET: FMN; 1.60A {Brucella melitensis}
Probab=20.06 E-value=19 Score=22.38 Aligned_cols=29 Identities=17% Similarity=0.289 Sum_probs=22.8
Q ss_pred CCCeEEEe---cCCccccccCCCcEeccCCCC
Q 045947 63 KPPKVAFR---TKVFHPNINSNGSICLDILKE 91 (101)
Q Consensus 63 ~pP~v~f~---t~i~HPnv~~~G~iCl~~l~~ 91 (101)
+||.|.+. ..--|.||..+|..|+++|.+
T Consensus 55 ~Pp~v~v~i~~~~~t~~~i~~~~~F~Vnvl~~ 86 (173)
T 3cb0_A 55 NPPTILICLQKIHEENRIFIENGVFAINTLAG 86 (173)
T ss_dssp TTEEEEEEEESSSGGGHHHHHHTEEEEEECBG
T ss_pred CCCEEEEEeCCCchHHHHHhhCCEEEEEeCCH
Confidence 67887765 334588999999999999964
Done!