BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045955
(139 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P13939|LEAD7_GOSHI Late embryogenesis abundant protein D-7 OS=Gossypium hirsutum PE=2
SV=1
Length = 136
Score = 112 bits (280), Expect = 7e-25, Method: Compositional matrix adjust.
Identities = 67/128 (52%), Positives = 88/128 (68%)
Query: 1 MASHDQSYRAGEVKGQTEERTNQTMENVRDKAQAAKDRTYEAAQQAKDKTSETAQQAKQR 60
MASH+QSY+AG +G+ E+ Q E++++KA+AAK +T E A+ AK KT ETA+ AKQ+
Sbjct: 1 MASHEQSYKAGRAEGRAHEKGEQMKESMKEKAEAAKQKTMETAEAAKQKTMETAEAAKQK 60
Query: 61 AAGTAEAGKQKTQETGQATGEKAEAAKEKTGGILKQTEEKVKDAAQSAADAVKHTFGFGG 120
G AE KT++T A KAE KE +GGIL+Q EKV++AAQ A DAVKHTFG
Sbjct: 61 TRGAAETTNDKTKQTAGAARGKAEETKETSGGILQQAGEKVRNAAQGATDAVKHTFGMAD 120
Query: 121 AGEEEERY 128
A E+E Y
Sbjct: 121 ADEDEHNY 128
>sp|P83442|LEAD3_DAUCA Late embryogenesis abundant protein Dc3 OS=Daucus carota PE=2 SV=1
Length = 163
Score = 104 bits (260), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 69/148 (46%), Positives = 87/148 (58%), Gaps = 23/148 (15%)
Query: 1 MASH-DQSYRAGEVKGQTEERTNQTMENVRDKAQAAKDRTYEAAQQA------------- 46
MASH DQSY+AGE KG +E+T Q + ++DKAQAAKD+ E A A
Sbjct: 1 MASHQDQSYKAGEPKGHAQEKTGQMADTMKDKAQAAKDKASEMAGSARDRTVESKDQTGS 60
Query: 47 ---------KDKTSETAQQAKQRAAGTAEAGKQKTQETGQATGEKAEAAKEKTGGILKQT 97
KDKT ETAQ AK++ G +A K+K E G++ E A A KEKTGG++
Sbjct: 61 YVSDKAGAVKDKTCETAQAAKEKTGGAMQATKEKASEMGESAKETAVAGKEKTGGLMSSA 120
Query: 98 EEKVKDAAQSAADAVKHTFGFGGAGEEE 125
E+VK AQ A +AVK+TFG GA EEE
Sbjct: 121 AEQVKGMAQGATEAVKNTFGMAGADEEE 148
>sp|O49817|LEA2_CICAR Late embryogenesis abundant protein 2 OS=Cicer arietinum PE=2 SV=1
Length = 155
Score = 102 bits (255), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 66/150 (44%), Positives = 88/150 (58%), Gaps = 22/150 (14%)
Query: 1 MASHDQSYRAGEVKGQTEERTNQTMENVRDK----------------------AQAAKDR 38
M SHDQSYRAGE KG+TEE+TNQ + N+ DK AQAAK++
Sbjct: 1 MTSHDQSYRAGEAKGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60
Query: 39 TYEAAQQAKDKTSETAQQAKQRAAGTAEAGKQKTQETGQATGEKAEAAKEKTGGILKQTE 98
T + AQ AKDKT +T Q K++A T K+K E GQ+T E A++ K+ + G L+QT
Sbjct: 61 TQQTAQAAKDKTQQTTQATKEKAQDTTGRAKEKGSEMGQSTKETAQSGKDNSAGFLQQTG 120
Query: 99 EKVKDAAQSAADAVKHTFGFGGAGEEEERY 128
EK K AQ A DAVK TFG ++++ +
Sbjct: 121 EKAKGMAQGATDAVKQTFGMTNDDQDKDHF 150
>sp|O49816|LEA1_CICAR Late embryogenesis abundant protein 1 OS=Cicer arietinum PE=2 SV=1
Length = 177
Score = 98.6 bits (244), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 93/172 (54%), Gaps = 44/172 (25%)
Query: 1 MASHDQSYRAGEVKGQTEERTNQTMENVRDK----------------------AQAAKDR 38
MASHDQSY+AGE G+TEE+TNQ + N+ DK AQAAK++
Sbjct: 1 MASHDQSYKAGETMGRTEEKTNQMIGNIEDKAQAAKEKAQQAAQTAKDKTSQTAQAAKEK 60
Query: 39 TYEAAQQAKDKTSETAQQAKQRAAGTAEAGKQKTQET----------------------G 76
T + AQ AK+KT +TAQ AK TA+A K KTQ+T G
Sbjct: 61 TQQTAQAAKEKTQQTAQAAKDETQQTAQAAKDKTQQTTEATKEKAQDTTGRAREKGSEMG 120
Query: 77 QATGEKAEAAKEKTGGILKQTEEKVKDAAQSAADAVKHTFGFGGAGEEEERY 128
Q+T E A++ K+ + G L+QT EKVK AQ A DAVK TFG ++++ +
Sbjct: 121 QSTKETAQSGKDNSAGFLQQTGEKVKGMAQGATDAVKQTFGMANDDKDKDHF 172
>sp|P0C5A4|LEA3_ORYSJ Late embryogenesis abundant protein, group 3 OS=Oryza sativa subsp.
japonica GN=LEA3 PE=2 SV=1
Length = 200
Score = 84.0 bits (206), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 82/171 (47%), Gaps = 53/171 (30%)
Query: 1 MASH-DQ-SYRAGEVKGQTEERTNQTM-----------------------------ENVR 29
MASH DQ SYRAGE K TEE+ Q M E +
Sbjct: 1 MASHQDQASYRAGETKAHTEEKAGQVMGASKDKASEAKDRASEAAGHAAGKGQDTKEATK 60
Query: 30 DKAQAAKDRTYEAAQQAKDKTSETAQ----------------------QAKQRAAGTAEA 67
+KAQAAK+R E AQ AKDKTS T+Q QAKQ+AA TA A
Sbjct: 61 EKAQAAKERASETAQAAKDKTSSTSQAARDKAAESKDQTGGFLGEKTEQAKQKAAETAGA 120
Query: 68 GKQKTQETGQATGEKAEAAKEKTGGILKQTEEKVKDAAQSAADAVKHTFGF 118
KQKT ET Q T + A A K+KTG +L+Q E+VK A DAV T G
Sbjct: 121 AKQKTAETAQYTKDSAIAGKDKTGSVLQQASEQVKSTVVGAKDAVMSTLGM 171
>sp|A2Y720|LEA3_ORYSI Late embryogenesis abundant protein, group 3 OS=Oryza sativa subsp.
indica GN=LEA3 PE=1 SV=1
Length = 200
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 82/171 (47%), Gaps = 53/171 (30%)
Query: 1 MASH-DQ-SYRAGEVKGQTEERTNQTM-----------------------------ENVR 29
MASH DQ SYRAGE K TEE+ Q M E +
Sbjct: 1 MASHQDQASYRAGETKAHTEEKAGQVMGASKDKASEAKDRASEAAGHAAGKGQDTKEATK 60
Query: 30 DKAQAAKDRTYEAAQQAKDKTSETAQ----------------------QAKQRAAGTAEA 67
+KAQAAK+R E AQ AKDKTS TAQ QAKQ+AA TA A
Sbjct: 61 EKAQAAKERASETAQAAKDKTSGTAQAARDKAAESKDQTGGFLGEKTEQAKQKAAETAGA 120
Query: 68 GKQKTQETGQATGEKAEAAKEKTGGILKQTEEKVKDAAQSAADAVKHTFGF 118
KQKT ET Q T + A A K+KTG +L+Q E+VK A DAV T G
Sbjct: 121 AKQKTAETAQYTKDSAIAGKDKTGSVLQQASEQVKSTVVGAKDAVMSTLGM 171
>sp|P13934|LEA76_BRANA Late embryogenesis abundant protein 76 OS=Brassica napus PE=2 SV=2
Length = 280
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/247 (32%), Positives = 100/247 (40%), Gaps = 109/247 (44%)
Query: 1 MASHDQSYRAGEVKGQTEERTNQTMENVRDKA---------------------------- 32
MAS+ QSY+AGE +G+T+E+T Q M +RDKA
Sbjct: 1 MASNQQSYKAGETRGKTQEKTGQAMGAMRDKAEEGKDKTSQTAQKAQQKAQETAQAAKDK 60
Query: 33 ----------------QAAKDRTYEAAQQ-----------AKDKTSETAQQAKQRAAGTA 65
QAAKD+T +AAQ AKDKTS+ AQ +Q+A T
Sbjct: 61 TSQAAQTTQQKAQETAQAAKDKTSQAAQTTQQKAQETAQAAKDKTSQAAQTTQQKAHETT 120
Query: 66 EAGKQKT----------------------QETGQA----------------------TGE 81
++ K+KT ETG+A T E
Sbjct: 121 QSSKEKTSQAAQTAQEKARETKDKTGSYLSETGEAVKQKAQDAAQYTKETAQNAAQYTKE 180
Query: 82 KAEAAKEKTGGILKQTEEKVKDAAQSAADAVKHTFGFGGAGEEEERYG----------DR 131
AEA K+KTGG L QT E VK A AADAVKHTFG E+ E Y D
Sbjct: 181 TAEAGKDKTGGFLSQTGEHVKQMAMGAADAVKHTFGMATEEEDREHYPGTTTCTTQSTDP 240
Query: 132 DRNTYTK 138
R+TY K
Sbjct: 241 TRHTYEK 247
>sp|P14928|LEA1_HORVU ABA-inducible protein PHV A1 OS=Hordeum vulgare GN=HVA1 PE=2 SV=1
Length = 213
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/188 (36%), Positives = 81/188 (43%), Gaps = 68/188 (36%)
Query: 1 MASHDQ--SYRAGEVKGQTEERTNQTMENVRDKA---------------QAAKDRTYEA- 42
MAS+ SY AGE K +TEE+T Q M + KA +A K +T E
Sbjct: 1 MASNQNQGSYHAGETKARTEEKTGQMMGATKQKAGQTTEATKQKAGETAEATKQKTGETA 60
Query: 43 -----------------AQQAKDKTSETAQQAKQRAA------GTA-----EAGKQKTQE 74
AQ AKDKT ETAQ AK+RAA G+A EA KQK E
Sbjct: 61 EAAKQKAAEAKDKTAQTAQAAKDKTYETAQAAKERAAQGKDQTGSALGEKTEAAKQKAAE 120
Query: 75 T----------------------GQATGEKAEAAKEKTGGILKQTEEKVKDAAQSAADAV 112
T Q T E A A K+KTG +L+Q E V +A A DAV
Sbjct: 121 TTEAAKQKAAEATEAAKQKASDTAQYTKESAVAGKDKTGSVLQQAGETVVNAVVGAKDAV 180
Query: 113 KHTFGFGG 120
+T G GG
Sbjct: 181 ANTLGMGG 188
>sp|Q03968|LEA3_WHEAT Late embryogenesis abundant protein, group 3 OS=Triticum aestivum
PE=2 SV=1
Length = 224
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 68/131 (51%), Gaps = 26/131 (19%)
Query: 16 QTEERTNQTMENVRDK----AQAAKDRTYEAAQ-------QAKDKTSET----AQQAKQR 60
+T E T Q +DK AQAAK++TYE AQ Q KD+T+ T + AKQ+
Sbjct: 69 ETAEATKQKAAEAKDKTAQTAQAAKEKTYETAQSAKERAAQGKDQTASTLGEKTEAAKQK 128
Query: 61 AAGTAEAGKQ-----------KTQETGQATGEKAEAAKEKTGGILKQTEEKVKDAAQSAA 109
AA T EA +Q K ET Q T E A K+KTG +L+Q E V +A A
Sbjct: 129 AAETTEAARQKAAEATEAAKQKASETAQYTKESAVTGKDKTGSVLQQAGETVVNAVVGAK 188
Query: 110 DAVKHTFGFGG 120
DAV +T G GG
Sbjct: 189 DAVANTLGMGG 199
Score = 57.0 bits (136), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 50/110 (45%), Positives = 64/110 (58%), Gaps = 9/110 (8%)
Query: 1 MASHDQ--SYRAGEVKGQTEERTNQTMENVRDKAQAAKDRTYEAAQQAKDKTSETAQQAK 58
MAS+ SY AGE K + EE+T Q M +DKA +T EA +Q K ET + K
Sbjct: 1 MASNQNQASYHAGETKARNEEKTGQVMGATKDKA----GQTTEATKQ---KAGETTEATK 53
Query: 59 QRAAGTAEAGKQKTQETGQATGEKAEAAKEKTGGILKQTEEKVKDAAQSA 108
Q+AA T EA KQK ET +AT +KA AK+KT + +EK + AQSA
Sbjct: 54 QKAAETTEAAKQKASETAEATKQKAAEAKDKTAQTAQAAKEKTYETAQSA 103
>sp|Q42376|LEA3_MAIZE Late embryogenesis abundant protein, group 3 OS=Zea mays GN=MGL3
PE=2 SV=1
Length = 221
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 65/195 (33%), Positives = 80/195 (41%), Gaps = 75/195 (38%)
Query: 1 MASHDQ--SYRAGEVKGQTEERTNQTMENVRDKAQAAKDR-------------------- 38
MASH SY+AGE K +TEE+T Q + +D AQ AKDR
Sbjct: 1 MASHQDKASYQAGETKARTEEKTGQAVGATKDTAQHAKDRAADAAGHAAGKGQDAKEATK 60
Query: 39 -------------TYEAAQQA-------KDKTSETAQQAKQRAAGTAEAGKQK----TQE 74
T EA +A K K ET + AKQ+A T EA KQK T+
Sbjct: 61 QKASDTGSYLGKKTDEAKHKAGETTEATKHKAGETTEAAKQKAGETTEAAKQKAGETTET 120
Query: 75 TGQATGEKAEAA-----------------------------KEKTGGILKQTEEKVKDAA 105
T Q GE EAA K+K+GG+++Q E+VK AA
Sbjct: 121 TKQKAGETTEAARQKAADAMEAAKQKAAEAGQYAKDTAVSGKDKSGGVIQQATEQVKSAA 180
Query: 106 QSAADAVKHTFGFGG 120
DAV T G GG
Sbjct: 181 AGRKDAVMSTLGMGG 195
>sp|Q8SVY9|Y3G1_ENCCU Uncharacterized protein ECU03_1610 OS=Encephalitozoon cuniculi
(strain GB-M1) GN=ECU03_1610 PE=1 SV=1
Length = 166
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 45/92 (48%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 30 DKAQAAKDRTYEAAQQAKDKTSETAQQAKQRAAGTAEAGKQKTQET-GQA---TGEKAEA 85
DKA A+D+T E A AKDKT ETA AK + TAE+ K KT+ET G A T E AE+
Sbjct: 24 DKACEARDKTKETAGSAKDKTKETAGSAKDKTKETAESAKDKTKETAGSAKDKTKETAES 83
Query: 86 AKEKTGGILKQTEEKVKDAAQSAADAVKHTFG 117
AK+KT ++K K+ A+SA D K T G
Sbjct: 84 AKDKTKETAGSAKDKTKETAESAKDKTKETAG 115
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 60/103 (58%), Gaps = 8/103 (7%)
Query: 9 RAGEVKGQTEERTNQTMENVRDKAQAAKDRTYEAAQQAKDKTSETAQQAKQRAAGTAEAG 68
+A E + +T+E + ++ A +AKD+T E A+ AKDKT ETA AK + TAE+
Sbjct: 25 KACEARDKTKETAGSAKDKTKETAGSAKDKTKETAESAKDKTKETAGSAKDKTKETAESA 84
Query: 69 KQKTQET-GQA---TGEKAEAAKEKT----GGILKQTEEKVKD 103
K KT+ET G A T E AE+AK+KT G + E K K+
Sbjct: 85 KDKTKETAGSAKDKTKETAESAKDKTKETAGNVRDNVENKDKN 127
>sp|O85467|GERIA_BACCE Spore germination protein GerIA OS=Bacillus cereus GN=gerIA PE=3
SV=1
Length = 663
Score = 33.9 bits (76), Expect = 0.28, Method: Composition-based stats.
Identities = 25/112 (22%), Positives = 55/112 (49%), Gaps = 2/112 (1%)
Query: 3 SHDQSYRAGEVKGQTEERTNQTMENVRDKAQAAKDRTYEAAQQAKDKTSETAQQAKQRAA 62
+ +Q + + +E+T ++M++ + K KD + + Q AK S +Q +
Sbjct: 20 TDNQEQHSNNQEDDNKEQT-RSMKHNKGKNNEQKDSSQDKQQSAKQGDSSQDKQQNPKQE 78
Query: 63 GTAEAGKQKTQETGQATGEKAEAAKEKTGGILKQTEEKVKDAAQSAADAVKH 114
+++ KQ+ + G ++ +K ++AK+K KQ K +D++Q + K
Sbjct: 79 DSSQ-DKQQNPKQGDSSQDKQQSAKQKDPSQDKQQNPKQEDSSQDKQQSAKQ 129
Score = 32.0 bits (71), Expect = 1.1, Method: Composition-based stats.
Identities = 21/86 (24%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 12 EVKGQTEERTNQTMENVRDKAQAAKDRTYEAAQQAKDKTSETAQQAKQRAA-GTAEAGKQ 70
E Q +++ + ++ +DK Q+AK + +Q K +++Q +Q A G + KQ
Sbjct: 78 EDSSQDKQQNPKQGDSSQDKQQSAKQKDPSQDKQQNPKQEDSSQDKQQSAKQGDSSQDKQ 137
Query: 71 KTQETGQATGEKAEAAKEKTGGILKQ 96
++ + G ++ +K + AK+ KQ
Sbjct: 138 QSAKQGDSSQDKQQNAKQDEPSQSKQ 163
Score = 30.4 bits (67), Expect = 3.8, Method: Composition-based stats.
Identities = 25/104 (24%), Positives = 52/104 (50%), Gaps = 4/104 (3%)
Query: 6 QSYRAGEVKGQTEERTNQTMENVRDKAQAAK--DRTYEAAQQAKDKTSETAQQAKQRAAG 63
QS + G+ Q +++ + ++ +DK Q K D + + Q AK K +Q +
Sbjct: 60 QSAKQGD-SSQDKQQNPKQEDSSQDKQQNPKQGDSSQDKQQSAKQKDPSQDKQQNPKQED 118
Query: 64 TAEAGKQKTQETGQATGEKAEAAKEKTGGILKQTEEKVKDAAQS 107
+++ KQ++ + G ++ +K ++AK+ KQ K + +QS
Sbjct: 119 SSQ-DKQQSAKQGDSSQDKQQSAKQGDSSQDKQQNAKQDEPSQS 161
>sp|Q6KCD5|NIPBL_MOUSE Nipped-B-like protein OS=Mus musculus GN=Nipbl PE=1 SV=1
Length = 2798
Score = 32.7 bits (73), Expect = 0.73, Method: Composition-based stats.
Identities = 22/106 (20%), Positives = 41/106 (38%)
Query: 9 RAGEVKGQTEERTNQTMENVRDKAQAAKDRTYEAAQQAKDKTSETAQQAKQRAAGTAEAG 68
R + K ++ N EN + + + K + + K K+ + KQ+ G E
Sbjct: 677 RPCDTKPNDNKQNNTRSENTKARPETPKQKAESRPETPKQKSEGRPETPKQKGDGRPETP 736
Query: 69 KQKTQETGQATGEKAEAAKEKTGGILKQTEEKVKDAAQSAADAVKH 114
KQK++ + +K E E + + K + + D KH
Sbjct: 737 KQKSEGRPETPKQKGEGRPETPKHRHENRRDSGKPSTEKKPDVSKH 782
>sp|Q9RV58|UB72_DEIRA Protein DR_1172 OS=Deinococcus radiodurans (strain ATCC 13939 / DSM
20539 / JCM 16871 / LMG 4051 / NBRC 15346 / NCIMB 9279 /
R1 / VKM B-1422) GN=DR_1172 PE=1 SV=1
Length = 298
Score = 32.3 bits (72), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 44/90 (48%), Gaps = 1/90 (1%)
Query: 29 RDKAQAAKDRTYEAAQQAKDKTSETAQQAKQRAAGTAEAGKQKTQETGQATGEKAEAAKE 88
+DK Q K +AA QAKDK + AQ KQ A A K K Q+ A+ AK+
Sbjct: 171 KDKVQDVKADASKAADQAKDKAQDVAQNVKQGAQQAASDAKDKVQDVKADASRAADQAKD 230
Query: 89 KTGGILKQTEEKVKDAAQSAADAVKHTFGF 118
K + + ++ +D A++ DA ++ F
Sbjct: 231 KAQDVAQNVKQSAQD-AKTDVDAKAKSWAF 259
>sp|P20075|LEAD8_DAUCA Embryonic protein DC-8 OS=Daucus carota PE=3 SV=1
Length = 555
Score = 32.3 bits (72), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 51/102 (50%), Gaps = 7/102 (6%)
Query: 9 RAGEVKGQTEERTNQTMENVRDKAQAAKDRTYEAAQQAKDKTSETAQQAKQRAAGTAEAG 68
+A E K T E+T + + KA KD T E A++AKD T + + K AA A+ G
Sbjct: 310 KAAETKDATMEKTKEYKDYTAQKAAETKDATMEKAKEAKDTTVQKTGEYKDYAAEKAKEG 369
Query: 69 KQKTQETGQATGEKAEAAKEKTGGILKQTEEKVKDAAQSAAD 110
K T EKA+ K+ T G + + ++ DAA+ A D
Sbjct: 370 K-------DVTVEKAKEGKDTTVGKMTELKDSAADAARKAMD 404
>sp|A2XG55|LEA1_ORYSI Late embryogenesis abundant protein 1 OS=Oryza sativa subsp. indica
GN=LEA1 PE=1 SV=2
Length = 333
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 32/111 (28%), Positives = 53/111 (47%), Gaps = 4/111 (3%)
Query: 9 RAGEVKGQTEERTNQTMENVRDKAQAAKDRTYEAAQQAKD----KTSETAQQAKQRAAGT 64
+A E +TN+T + RDK KD T + Q+ KD K S+ ++ K +
Sbjct: 122 KARETNDSVARKTNETADATRDKLGEYKDYTADKTQETKDAVAQKASDASEATKNKLGEY 181
Query: 65 AEAGKQKTQETGQATGEKAEAAKEKTGGILKQTEEKVKDAAQSAADAVKHT 115
+A +KT++ T +KA K+ ++T + KD Q+AAD + T
Sbjct: 182 KDALARKTRDAKDTTAQKATEFKDGVKATAQETRDATKDTTQTAADKARET 232
Score = 30.8 bits (68), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 4/80 (5%)
Query: 19 ERTNQTMENVRDKAQAAKDRTYEAAQQAKD----KTSETAQQAKQRAAGTAEAGKQKTQE 74
E+T+QT + RDK KD T + A++ D KT+ETA + + + KTQE
Sbjct: 99 EKTSQTADATRDKLGEYKDYTADKARETNDSVARKTNETADATRDKLGEYKDYTADKTQE 158
Query: 75 TGQATGEKAEAAKEKTGGIL 94
T A +KA A E T L
Sbjct: 159 TKDAVAQKASDASEATKNKL 178
>sp|P13940|LEA29_GOSHI Late embryogenesis abundant protein D-29 OS=Gossypium hirsutum PE=3
SV=1
Length = 302
Score = 30.4 bits (67), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 40/82 (48%), Gaps = 8/82 (9%)
Query: 1 MASHDQSYR-AGEVKGQTEE-------RTNQTMENVRDKAQAAKDRTYEAAQQAKDKTSE 52
M S D+ R ++K +TEE RT Q + ++ KA A + QQAKD+ SE
Sbjct: 26 MPSTDEDARDYSKLKTKTEEATDEHHSRTQQAKDELKSKADHAANEVKSNTQQAKDRASE 85
Query: 53 TAQQAKQRAAGTAEAGKQKTQE 74
++AK+ E K+K E
Sbjct: 86 VGKEAKEYTESWTEWAKEKISE 107
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.299 0.115 0.296
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 46,766,284
Number of Sequences: 539616
Number of extensions: 1665883
Number of successful extensions: 12199
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 424
Number of HSP's successfully gapped in prelim test: 889
Number of HSP's that attempted gapping in prelim test: 9447
Number of HSP's gapped (non-prelim): 2750
length of query: 139
length of database: 191,569,459
effective HSP length: 104
effective length of query: 35
effective length of database: 135,449,395
effective search space: 4740728825
effective search space used: 4740728825
T: 11
A: 40
X1: 17 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.7 bits)
S2: 55 (25.8 bits)