BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045957
(217 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Q44|A Chain A, Crystal Structure Of An Arabidopsis Thaliana Putative
Steroid Sulfotransferase
pdb|2Q3M|A Chain A, Ensemble Refinement Of The Protein Crystal Structure Of An
Arabidopsis Thaliana Putative Steroid Sulphotransferase
Length = 326
Score = 144 bits (364), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 129/276 (46%), Gaps = 72/276 (26%)
Query: 5 VNGVISFRKHFQAEDSDIILAPYPKSGTTWIKALTFTIVNRSRYAIEDS---PLLTASPH 61
+ G++ +K F+A+DSDIIL PKSGTTW+KAL F ++NR ++ + S PLL +PH
Sbjct: 51 LQGILICQKRFEAKDSDIILVTNPKSGTTWLKALVFALLNRHKFPVSSSGNHPLLVTNPH 110
Query: 62 QLKDFF---------------------STHVPYASVPSSILESNCRIVYICTNPLGQFIA 100
L F +TH+ + S+P S+ S+C+IVY C NP F++
Sbjct: 111 LLVPFLEGVYYESPDFDFSSLPSPRLMNTHISHLSLPESVKSSSCKIVYCCRNPKDMFVS 170
Query: 101 ------RRNNLEPSQLELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN 154
+ E + +++A E C G + GP W+H+L YW AS E P K+LF+ YE
Sbjct: 171 LWHFGKKLAPEETADYPIEKAVEAFCEGKFIGGPFWDHILEYWYASRENPNKVLFVTYEE 230
Query: 155 LGKPLVYPI---------------------------------------LPG---NSLFLR 172
L K + LP F R
Sbjct: 231 LKKQTEVEMKRIAEFLECGFIEEEEVREIVKLCSFESLSNLEVNKEGKLPNGIETKTFFR 290
Query: 173 KGEVGNWKNYLSPSMSQHLQKVVEEKLDGPSLTFKT 208
KGE+G W++ LS S+++ + + +EEK G L F +
Sbjct: 291 KGEIGGWRDTLSESLAEEIDRTIEEKFKGSGLKFSS 326
>pdb|2REO|A Chain A, Crystal Structure Of Human Sulfotransferase 1c3 (Sult1c3)
In Complex With Pap
Length = 305
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 71/266 (26%)
Query: 14 HFQAEDSDIILAPYPKSGTTWIKALTFTIVN--------RSRYAIEDSPLLTASPHQLK- 64
+FQA+ D+ILA YPKSGTTW+ + I+N R++ + L PH+ K
Sbjct: 42 NFQAKPDDLILATYPKSGTTWMHEILDMILNDGDVEKCKRAQTLDRHAFLELKFPHKEKP 101
Query: 65 -----------DFFSTHVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLEPS 108
TH+P +P SI + NC+IVY+ NP ++ R + P
Sbjct: 102 DLEFVLEMSSPQLIKTHLPSHLIPPSIWKENCKIVYVARNPKDCLVSYYHFHRMASFMPD 161
Query: 109 QLELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK----------- 157
L+E +E+ +G V G ++HV G+W A + +IL+L YE++ K
Sbjct: 162 PQNLEEFYEKFMSGKVVGGSWFDHVKGWWAA--KDMHRILYLFYEDIKKDPKREIEKILK 219
Query: 158 --------------------------PLV-YPILPGN------SLFLRKGEVGNWKNYLS 184
P+ Y LP + S F+RKG G+WKNY +
Sbjct: 220 FLEKDISEEILNKIIYHTSFDVMKQNPMTNYTTLPTSIMDHSISPFMRKGMPGDWKNYFT 279
Query: 185 PSMSQHLQKVVEEKLDGPSLTFKTSL 210
+ ++ K ++K+ G +LTF+T +
Sbjct: 280 VAQNEEFDKDYQKKMAGSTLTFRTEI 305
>pdb|2H8K|A Chain A, Human Sulfotranferase Sult1c3 In Complex With Pap
pdb|2H8K|B Chain B, Human Sulfotranferase Sult1c3 In Complex With Pap
Length = 306
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 119/266 (44%), Gaps = 71/266 (26%)
Query: 14 HFQAEDSDIILAPYPKSGTTWIKALTFTIVN--------RSRYAIEDSPLLTASPHQLK- 64
+FQA+ D+ILA YPKSGTTW+ + I+N R++ + L PH+ K
Sbjct: 43 NFQAKPDDLILATYPKSGTTWMHEILDMILNDGDVEKCKRAQTLDRHAFLELKFPHKEKP 102
Query: 65 -----------DFFSTHVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLEPS 108
TH+P +P SI + NC+IVY+ NP ++ R + P
Sbjct: 103 DLEFVLEMSSPQLIKTHLPSHLIPPSIWKENCKIVYVARNPKDCLVSYYHFHRMASFMPD 162
Query: 109 QLELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK----------- 157
L+E +E+ +G V G ++HV G+W A + +IL+L YE++ K
Sbjct: 163 PQNLEEFYEKFMSGKVVGGSWFDHVKGWWAA--KDMHRILYLFYEDIKKDPKREIEKILK 220
Query: 158 --------------------------PLV-YPILPGN------SLFLRKGEVGNWKNYLS 184
P+ Y LP + S F+RKG G+WKNY +
Sbjct: 221 FLEKDISEEILNKIIYHTSFDVMKQNPMTNYTTLPTSIMDHSISPFMRKGMPGDWKNYFT 280
Query: 185 PSMSQHLQKVVEEKLDGPSLTFKTSL 210
+ ++ K ++K+ G +LTF+T +
Sbjct: 281 VAQNEEFDKDYQKKMAGSTLTFRTEI 306
>pdb|3CKL|A Chain A, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult1b1 In Complex With Pap And Resveratrol
pdb|3CKL|B Chain B, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult1b1 In Complex With Pap And Resveratrol
Length = 298
Score = 90.1 bits (222), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 71/267 (26%)
Query: 13 KHFQAEDSDIILAPYPKSGTTWIKALTFTIVN-------RSRYAIEDSPLL--------T 57
+ F + DI++A YPKSGTTW+ + I+N + + E P+L T
Sbjct: 34 EQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDIEKCKRGFITEKVPMLEMTLPGLRT 93
Query: 58 ASPHQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIAR-----RNNLEP 107
+ QL+ TH+P +P S E+NC+++Y+ N ++ NNL+P
Sbjct: 94 SGIEQLEKNPSPRIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSYYHFDLMNNLQP 153
Query: 108 SQLELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK---------- 157
+E E+ G +G + HV +WK E P ILFL YE++ +
Sbjct: 154 FPGTWEEYLEKFLTGKVAYGSWFTHVKNWWKKKEEHP--ILFLYYEDMKENPKEEIKKII 211
Query: 158 ---------------------------PLV-YPILP------GNSLFLRKGEVGNWKNYL 183
PLV Y LP S F+RKG G+WKNY
Sbjct: 212 RFLEKNLNDEILDRIIHHTSFEVMKDNPLVNYTHLPTTVMDHSKSPFMRKGTAGDWKNYF 271
Query: 184 SPSMSQHLQKVVEEKLDGPSLTFKTSL 210
+ + ++ + E ++ +L F+T +
Sbjct: 272 TVAQNEKFDAIYETEMSKTALQFRTEI 298
>pdb|2Z5F|A Chain A, Human Sulfotransferase Sult1b1 In Complex With Pap
pdb|2Z5F|B Chain B, Human Sulfotransferase Sult1b1 In Complex With Pap
Length = 298
Score = 89.7 bits (221), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 71/267 (26%)
Query: 13 KHFQAEDSDIILAPYPKSGTTWIKALTFTIVN-------RSRYAIEDSPLL--------T 57
+ F + DI++A YPKSGTTW+ + I+N + + E P+L T
Sbjct: 34 EQFHSRPDDIVIATYPKSGTTWVSEIIDMILNDGDIEKCKRGFITEKVPMLEMTLPGLRT 93
Query: 58 ASPHQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIAR-----RNNLEP 107
+ QL+ TH+P +P S E+NC+++Y+ N ++ NNL+P
Sbjct: 94 SGIEQLEKNPSPRIVKTHLPTDLLPKSFWENNCKMIYLARNAKDVSVSYYHFDLMNNLQP 153
Query: 108 SQLELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK---------- 157
+E E+ G +G + HV +WK E P ILFL YE++ +
Sbjct: 154 FPGTWEEYLEKFLTGKVAYGSWFTHVKNWWKRKEEHP--ILFLYYEDMKENPKEEIKKII 211
Query: 158 ---------------------------PLV-YPILP------GNSLFLRKGEVGNWKNYL 183
PLV Y LP S F+RKG G+WKNY
Sbjct: 212 RFLEKNLNDEILDRIIHHTSFEVMKDNPLVNYTHLPTTVMDHSKSPFMRKGTAGDWKNYF 271
Query: 184 SPSMSQHLQKVVEEKLDGPSLTFKTSL 210
+ + ++ + E ++ +L F+T +
Sbjct: 272 TVAQNEKFDAIYETEMSKTALQFRTEI 298
>pdb|2AD1|A Chain A, Human Sulfotransferase Sult1c2
pdb|2GWH|A Chain A, Human Sulfotranferase Sult1c2 In Complex With Pap And
Pentachlorophenol
pdb|2GWH|B Chain B, Human Sulfotranferase Sult1c2 In Complex With Pap And
Pentachlorophenol
Length = 298
Score = 84.0 bits (206), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 113/264 (42%), Gaps = 78/264 (29%)
Query: 15 FQAEDSDIILAPYPKSGTTWIKALTFTIVN-----RSRYA--IEDSPLLTA--------- 58
FQA+ D++++ YPK+GTTW + + I N +S+ A + P L
Sbjct: 37 FQAKPDDLLISTYPKAGTTWTQEIVELIQNEGDVEKSKRAPTHQRFPFLEMKIPSLGSGL 96
Query: 59 -------SPHQLKDFFSTHVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLE 106
SP LK TH+P+ +P S+LE NC+I+Y+ NP ++ R N
Sbjct: 97 EQAHAMPSPRILK----THLPFHLLPPSLLEKNCKIIYVARNPKDNMVSYYHFQRMNKAL 152
Query: 107 PSQLELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK--------- 157
P+ +E FE G +G EHV G+W+A + +IL+L YE++ K
Sbjct: 153 PAPGTWEEYFETFLAGKVCWGSWHEHVKGWWEAKDKH--RILYLFYEDMKKNPKHEIQKL 210
Query: 158 ----------------------------PLV-YPILPGN------SLFLRKGEVGNWKNY 182
P+ Y +P S F+RKG VG+WK +
Sbjct: 211 AEFIGKKLDDKVLDKIVHYTSFDVMKQNPMANYSSIPAEIMDHSISPFMRKGAVGDWKKH 270
Query: 183 LSPSMSQHLQKVVEEKLDGPSLTF 206
+ + ++ + ++K+ LTF
Sbjct: 271 FTVAQNERFDEDYKKKMTDTRLTF 294
>pdb|3BFX|A Chain A, Crystal Structure Of Human Sulfotransferase Sult1c1 In
Complex With Pap
pdb|3BFX|B Chain B, Crystal Structure Of Human Sulfotransferase Sult1c1 In
Complex With Pap
Length = 296
Score = 81.3 bits (199), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 111/264 (42%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWIKALTFTI-----VNRSRYAI--------------EDSPL 55
F+A+ D+++ YPK+GTTWI+ + I V + + AI + S +
Sbjct: 35 FEAKPDDLLICTYPKAGTTWIQEIVDMIEQNGDVEKCQRAIIQHRHPFIEWARPPQPSGV 94
Query: 56 LTASPHQLKDFFSTHVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLEPSQL 110
A TH+ +P S E+NC+ +Y+ N ++ R N++ P
Sbjct: 95 EKAKAMPSPRILKTHLSTQLLPPSFWENNCKFLYVARNAKDCMVSYYHFQRMNHMLPDPG 154
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------L 155
+E FE NG V+G ++HV G+W+ ++ +ILFL YE+ +
Sbjct: 155 TWEEYFETFINGKVVWGSWFDHVKGWWE--MKDRHQILFLFYEDIKRDPKHEIRKVMQFM 212
Query: 156 GKPLVYPILP-----------------------------GNSLFLRKGEVGNWKNYLSPS 186
GK + +L S F+RKG VG+WKN+ + +
Sbjct: 213 GKKVDETVLDKIVQETSFEKMKENPMTNRSTVSKSILDQSISSFMRKGTVGDWKNHFTVA 272
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
++ ++ K++G S+ F L
Sbjct: 273 QNERFDEIYRRKMEGTSINFSMEL 296
>pdb|1HY3|A Chain A, Crystal Structure Of Human Estrogen Sulfotransferase V269e
Mutant In The Presence Of Paps
pdb|1HY3|B Chain B, Crystal Structure Of Human Estrogen Sulfotransferase V269e
Mutant In The Presence Of Paps
Length = 294
Score = 75.1 bits (183), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 104/264 (39%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWIKALTFTIVNRS--RYAIEDS-----PLLTASPHQLKD-- 65
FQA D+++A YPKSGTTW+ + + I ED P L L +
Sbjct: 33 FQARPDDLVIATYPKSGTTWVSEIVYMIYKEGDVEKCKEDVIFNRIPFLECRKENLMNGV 92
Query: 66 ----------FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIARRNNL-----EPSQL 110
TH+P +P+S E +C+I+Y+C N ++ P+
Sbjct: 93 KQLDEMNSPRIVKTHLPPELLPASFWEKDCKIIYLCRNAKDVAVSFYYFFLMVAGHPNPG 152
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGKPLV---------- 160
E E+ G +G ++HV +W+ + ++LFL YE+L + +
Sbjct: 153 SFPEFVEKFMQGQVPYGSWYKHVKSWWEKG--KSPRVLFLFYEDLKEDIRKEVIKLIHFL 210
Query: 161 ----------------------------YPILPGN------SLFLRKGEVGNWKNYLSPS 186
Y LP S F+RKG G+WKN+ + +
Sbjct: 211 ERKPSEELVDRIIHHTSFQEMKNNPSTNYTTLPDEIMNQKLSPFMRKGITGDWKNHFTEA 270
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
+++ K E+++ +L F+T +
Sbjct: 271 LNEKFDKHYEQQMKESTLKFRTEI 294
>pdb|1G3M|A Chain A, Crystal Structure Of Human Estrogen Sulfotransferase In
Complex With In-Active Cofactor Pap And 3,5,3',5'-
Tetrachloro-Biphenyl-4,4'-Diol
pdb|1G3M|B Chain B, Crystal Structure Of Human Estrogen Sulfotransferase In
Complex With In-Active Cofactor Pap And 3,5,3',5'-
Tetrachloro-Biphenyl-4,4'-Diol
Length = 294
Score = 74.7 bits (182), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 104/264 (39%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWIKALTFTIVNRS--RYAIEDS-----PLLTASPHQLKD-- 65
FQA D+++A YPKSGTTW+ + + I ED P L L +
Sbjct: 33 FQARPDDLVIATYPKSGTTWVSEIVYMIYKEGDVEKCKEDVIFNRIPFLECRKENLMNGV 92
Query: 66 ----------FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIARRNNL-----EPSQL 110
TH+P +P+S E +C+I+Y+C N ++ P+
Sbjct: 93 KQLDEMNSPRIVKTHLPPELLPASFWEKDCKIIYLCRNAKDVAVSFYYFFLMVAGHPNPG 152
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGKPLV---------- 160
E E+ G +G ++HV +W+ + ++LFL YE+L + +
Sbjct: 153 SFPEFVEKFMQGQVPYGSWYKHVKSWWEKG--KSPRVLFLFYEDLKEDIRKEVIKLIHFL 210
Query: 161 ----------------------------YPILPGN------SLFLRKGEVGNWKNYLSPS 186
Y LP S F+RKG G+WKN+ + +
Sbjct: 211 ERKPSEELVDRIIHHTSFQEMKNNPSTNYTTLPDEIMNQKLSPFMRKGITGDWKNHFTVA 270
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
+++ K E+++ +L F+T +
Sbjct: 271 LNEKFDKHYEQQMKESTLKFRTEI 294
>pdb|1AQU|A Chain A, Estrogen Sulfotransferase With Bound Inactive Cofactor Pap
And 17-Beta Estradiol
pdb|1AQU|B Chain B, Estrogen Sulfotransferase With Bound Inactive Cofactor Pap
And 17-Beta Estradiol
pdb|1AQY|A Chain A, Estrogen Sulfotransferase With Pap
pdb|1AQY|B Chain B, Estrogen Sulfotransferase With Pap
pdb|1BO6|A Chain A, Estrogen Sulfotransferase With Inactive Cofactor Pap And
Vanadate
pdb|1BO6|B Chain B, Estrogen Sulfotransferase With Inactive Cofactor Pap And
Vanadate
Length = 297
Score = 73.9 bits (180), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 58/264 (21%), Positives = 107/264 (40%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWIKALTF--------------TIVNRSRYAIEDSPLLTASP 60
F A D+++A YPKSGTTWI + + I NR Y + L
Sbjct: 36 FLARPDDLVIATYPKSGTTWISEVVYMIYKEGDVEKCKEDAIFNRIPYLECRNEDLINGI 95
Query: 61 HQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIARRNNL-----EPSQL 110
QLK+ TH+P +P+S E NC+++Y+C N ++ L P+
Sbjct: 96 KQLKEKESPRIVKTHLPPKLLPASFWEKNCKMIYLCRNAKDVAVSYYYFLLMITSYPNPK 155
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGKPLV---------- 160
E E+ G +G ++HV +W+ S + ++LF+ YE++ + +
Sbjct: 156 SFSEFVEKFMQGQVPYGSWYDHVKAWWEKS--KNSRVLFMFYEDMKEDIRREVVKLIEFL 213
Query: 161 ----------------------------YPILPGNSL------FLRKGEVGNWKNYLSPS 186
Y ++P + F+RKG +G+WKN+ +
Sbjct: 214 ERKPSAELVDRIIQHTSFQEMKNNPSTNYTMMPEEMMNQKVSPFMRKGIIGDWKNHFPEA 273
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
+ + + ++++ ++ F+ L
Sbjct: 274 LRERFDEHYKQQMKDCTVKFRMEL 297
>pdb|3QVU|A Chain A, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And P-Nitrophenol
pdb|3QVU|B Chain B, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And P-Nitrophenol
pdb|3QVV|A Chain A, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And 3-Cyc
pdb|3QVV|B Chain B, Crystal Structure Of Ancestral Variant B9 Of Sult 1a1 In
Complex With Pap And 3-Cyc
Length = 295
Score = 70.9 bits (172), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 104/264 (39%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWI--------------KALTFTIVNRSRYAIEDSPLLTASP 60
FQA D++++ YPKSGTTW+ K I NR + +P + +
Sbjct: 34 FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFNRVPFLEFKAPGIPSGM 93
Query: 61 HQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLEPSQL 110
LKD TH+P A +P ++L+ ++VY+ N ++ + P
Sbjct: 94 ETLKDTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPDPG 153
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK------------- 157
D E+ G +G ++HV +W+ S P +L+L YE++ +
Sbjct: 154 TWDSFLEKFMVGEVCYGSWYQHVQEWWELSRTHP--VLYLFYEDMKENPKREIQKILEFV 211
Query: 158 ------------------------PLV-YPILPGN------SLFLRKGEVGNWKNYLSPS 186
P+ Y +P S F+RKG G+WK + +
Sbjct: 212 GHSLPEETVDFMVQHTSFKEMKKNPMTNYTTIPQEIMDHSISPFMRKGMAGDWKTTFTVA 271
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
++ EK+ G SL+F++ L
Sbjct: 272 QNERFDADYAEKMAGCSLSFRSEL 295
>pdb|1CJM|A Chain A, Human Sult1a3 With Sulfate Bound
pdb|2A3R|A Chain A, Crystal Structure Of Human Sulfotransferase Sult1a3 In
Complex With Dopamine And 3-Phosphoadenosine 5-Phosphate
pdb|2A3R|B Chain B, Crystal Structure Of Human Sulfotransferase Sult1a3 In
Complex With Dopamine And 3-Phosphoadenosine 5-Phosphate
Length = 295
Score = 69.3 bits (168), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 104/264 (39%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWIKALTFTI--------VNRSRYAIEDSPLLTASPHQ---- 62
FQA D+++ YPKSGTTW+ + I NR+ + L P +
Sbjct: 34 FQARPDDLLINTYPKSGTTWVSQILDMIYQGGDLEKCNRAPIYVRVPFLEVNDPGEPSGL 93
Query: 63 --LKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLEPSQL 110
LKD +H+P A +P ++L+ ++VY+ NP ++ R P
Sbjct: 94 ETLKDTPPPRLIKSHLPLALLPQTLLDQKVKVVYVARNPKDVAVSYYHFHRMEKAHPEPG 153
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK------------- 157
D E+ G +G ++HV +W+ S P +L+L YE++ +
Sbjct: 154 TWDSFLEKFMAGEVSYGSWYQHVQEWWELSRTHP--VLYLFYEDMKENPKREIQKILEFV 211
Query: 158 ------------------------PLV-YPILPGN------SLFLRKGEVGNWKNYLSPS 186
P+ Y +P S F+RKG G+WK + +
Sbjct: 212 GRSLPEETMDFMVQHTSFKEMKKNPMTNYTTVPQELMDHSISPFMRKGMAGDWKTTFTVA 271
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
++ EK+ G SL+F++ L
Sbjct: 272 QNERFDADYAEKMAGCSLSFRSEL 295
>pdb|2ZPT|X Chain X, Crystal Structure Of Mouse Sulfotransferase Sult1d1
Complex With Pap
pdb|2ZVP|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Pap And P-Nitrophenol
pdb|2ZVQ|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Pap And Alpha-naphthol
pdb|2ZYT|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Paps
pdb|2ZYU|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Paps And P-Nitrophenyl Sulfate
pdb|2ZYV|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With PapsPAP AND P-Nitrophenol
pdb|2ZYW|X Chain X, Crystal Structure Of Mouse Cytosolic Sulfotransferase
Msult1d1 Complex With Pap And P-Nitrophenol, Obtained By
Two-Step Soaking Method
Length = 295
Score = 68.6 bits (166), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 109/264 (41%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWIKALTFTIVNR------SRYAIEDS--------PLLTASP 60
F+A DI+++ YPKSGTTW+ + I N R AI P +T
Sbjct: 34 FEARPDDILISTYPKSGTTWVSEILDLIYNNGDAEKCKRDAIYKRVPFMELIIPGITNGV 93
Query: 61 HQLKDFFS-----THVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLEPSQL 110
L + S TH+P +PSS +++C+I+Y+ N ++ + + P
Sbjct: 94 EMLNNMPSPRIVKTHLPVQLLPSSFWKNDCKIIYVARNAKDVVVSYYYFYQMAKIHPEPG 153
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLG-------------- 156
+E E+ G FGP ++HV +W+ E +IL+L YE++
Sbjct: 154 TWEEFLEKFMAGQVSFGPWYDHVKSWWEKRKEY--RILYLFYEDMKENPKCEIQKILKFL 211
Query: 157 -----KPLVYPILPGNSL-------------------------FLRKGEVGNWKNYLSPS 186
+ ++ IL +S F+RKG G+WKN + +
Sbjct: 212 EKDIPEEILNKILYHSSFSVMKENPSANYTTMMKEEMDHSVSPFMRKGISGDWKNQFTVA 271
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
+ ++ +K++ +L F++ +
Sbjct: 272 QYEKFEEDYVKKMEDSTLKFRSEI 295
>pdb|3U3R|A Chain A, Crystal Structure Of D249g Mutated Human Sult1a1 Bound To
Pap And P- Nitrophenol
Length = 315
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/264 (23%), Positives = 106/264 (40%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWI--------------KALTFTIVNRSRYAIEDSPLLTASP 60
FQA D++++ YPKSGTTW+ K I R + +P + +
Sbjct: 54 FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFMRVPFLEFKAPGIPSGM 113
Query: 61 HQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLEPSQL 110
LKD TH+P A +P ++L+ ++VY+ N ++ + P
Sbjct: 114 ETLKDTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPEPG 173
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK------------- 157
D E+ G +G ++HV +W+ S P +L+L YE++ +
Sbjct: 174 TWDSFLEKFMVGEVSYGSWYQHVQEWWELSRTHP--VLYLFYEDMKENPKREIQKILEFV 231
Query: 158 ------------------------PLV-YPILP----GNSL--FLRKGEVGNWKNYLSPS 186
P+ Y +P G+S+ F+RKG G+WK + +
Sbjct: 232 GHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMGHSISPFMRKGMAGDWKTTFTVA 291
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
++ EK+ G SL+F++ L
Sbjct: 292 QNERFDADYAEKMAGCSLSFRSEL 315
>pdb|3F3Y|A Chain A, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|B Chain B, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|C Chain C, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
pdb|3F3Y|D Chain D, Crystal Structure Of Human Cytosolic Sulfotransferase
Sult2a1 In Complex With Pap And Lithocholic Acid
Length = 285
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 93/250 (37%), Gaps = 64/250 (25%)
Query: 12 RKHFQAEDSDIILAPYPKSGTTWIKAL--------------TFTIVNRSRYAIEDSPLLT 57
R F D D+I+ YPKSGT W+ + + I RS + +
Sbjct: 27 RDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVPIWERSPWVESEIGYTA 86
Query: 58 ASPHQLKDFFSTHVPYASVPSSILESNCRIVYICTNPL-----GQFIARRNNLEPSQLEL 112
S + FS+H+P P S S +++Y+ NP G F +
Sbjct: 87 LSETESPRLFSSHLPIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNMKFIKKPKSW 146
Query: 113 DEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGK 157
+E FE C G ++G ++H+ G+ + + L L YE LGK
Sbjct: 147 EEYFEWFCQGTVLYGSWFDHIHGW--MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGK 204
Query: 158 PL----VYPILPGNSL------------------------FLRKGEVGNWKNYLSPSMSQ 189
L + IL +S LRKG G+WKN+ + + ++
Sbjct: 205 TLEPEELNLILKNSSFQSMKENKMSNYSLLSVDYVVDKAQLLRKGVSGDWKNHFTVAQAE 264
Query: 190 HLQKVVEEKL 199
K+ +EK+
Sbjct: 265 DFDKLFQEKM 274
>pdb|1J99|A Chain A, Crystal Structure Of Human Dehydroepiandrosterone
Sulfotransferase In Complex With Substrate
Length = 293
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 93/250 (37%), Gaps = 64/250 (25%)
Query: 12 RKHFQAEDSDIILAPYPKSGTTWIKAL--------------TFTIVNRSRYAIEDSPLLT 57
R F D D+I+ YPKSGT W+ + + I RS + +
Sbjct: 35 RDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVPIWERSPWVESEIGYTA 94
Query: 58 ASPHQLKDFFSTHVPYASVPSSILESNCRIVYICTNPL-----GQFIARRNNLEPSQLEL 112
S + FS+H+P P S S +++Y+ NP G F +
Sbjct: 95 LSETESPRLFSSHLPIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNMKFLKKPKSW 154
Query: 113 DEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGK 157
+E FE C G ++G ++H+ G+ + + L L YE LGK
Sbjct: 155 EEYFEWFCQGTVLYGSWFDHIHGW--MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGK 212
Query: 158 PL----VYPILPGNSL------------------------FLRKGEVGNWKNYLSPSMSQ 189
L + IL +S LRKG G+WKN+ + + ++
Sbjct: 213 TLEPEELNLILKNSSFQSMKENKMSNYSLLSVDYVVDKTQLLRKGVSGDWKNHFTVAQAE 272
Query: 190 HLQKVVEEKL 199
K+ +EK+
Sbjct: 273 DFDKLFQEKM 282
>pdb|4IFB|A Chain A, Crystal Structure Of Sult 2a1 Llgg Mutant With Paps
pdb|4IFB|B Chain B, Crystal Structure Of Sult 2a1 Llgg Mutant With Paps
Length = 285
Score = 67.8 bits (164), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 93/250 (37%), Gaps = 64/250 (25%)
Query: 12 RKHFQAEDSDIILAPYPKSGTTWIKAL--------------TFTIVNRSRYAIEDSPLLT 57
R F D D+I+ YPKSGT W+ + + I RS + +
Sbjct: 27 RDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVPIWERSPWVESEIGYTA 86
Query: 58 ASPHQLKDFFSTHVPYASVPSSILESNCRIVYICTNPL-----GQFIARRNNLEPSQLEL 112
S + FS+H+P P S S +++Y+ NP G F +
Sbjct: 87 LSETESPRLFSSHLPIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNMKFIKKPKSW 146
Query: 113 DEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGK 157
+E FE C G ++G ++H+ G+ + + L L YE LGK
Sbjct: 147 EEYFEWFCQGTVLYGSWFDHIHGW--MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGK 204
Query: 158 PL----VYPILPGNSL------------------------FLRKGEVGNWKNYLSPSMSQ 189
L + IL +S LRKG G+WKN+ + + ++
Sbjct: 205 TLEPEELNLILKNSSFQSMKENKMSNYSGGSVDYVVDKAQLLRKGVSGDWKNHFTVAQAE 264
Query: 190 HLQKVVEEKL 199
K+ +EK+
Sbjct: 265 DFDKLFQEKM 274
>pdb|1OV4|A Chain A, Crystal Structure Of Human Dhea-st Complexed With
Androsterone
Length = 293
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 93/250 (37%), Gaps = 64/250 (25%)
Query: 12 RKHFQAEDSDIILAPYPKSGTTWIKAL--------------TFTIVNRSRYAIEDSPLLT 57
R F D D+I+ YPKSGT W+ + + I RS + +
Sbjct: 35 RDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVPIWERSPWVESEIGYTA 94
Query: 58 ASPHQLKDFFSTHVPYASVPSSILESNCRIVYICTNPL-----GQFIARRNNLEPSQLEL 112
S + FS+H+P P S S +++Y+ NP G F +
Sbjct: 95 LSETESPRLFSSHLPIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNMKFIKKPKSW 154
Query: 113 DEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGK 157
+E FE C G ++G ++H+ G+ + + L L YE LGK
Sbjct: 155 EEYFEWFCQGTVLYGSWFDHIHGW--MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGK 212
Query: 158 PL----VYPILPGNSL------------------------FLRKGEVGNWKNYLSPSMSQ 189
L + IL +S LRKG G+WKN+ + + ++
Sbjct: 213 TLEPEELNLILKNSSFQSMKENKMSNYSLLSVDYVVDKTQLLRKGVSGDWKNHFTVAQAE 272
Query: 190 HLQKVVEEKL 199
K+ +EK+
Sbjct: 273 DFDKLFQEKM 282
>pdb|1EFH|A Chain A, Crystal Structure Of The Human Hydroxysteroid
Sulfotransferase In The Presence Of Pap
pdb|1EFH|B Chain B, Crystal Structure Of The Human Hydroxysteroid
Sulfotransferase In The Presence Of Pap
Length = 292
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 95/250 (38%), Gaps = 64/250 (25%)
Query: 12 RKHFQAEDSDIILAPYPKSGTTWIKALTFTIVNRSRYA-IEDSPLLTASPHQLKD----- 65
R F D D+I+ YPKSGT W+ + + ++ I+ P+ SP +
Sbjct: 27 RDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVPIWERSPWVESEIGYTA 86
Query: 66 --------FFSTHVPYASVPSSILESNCRIVYICTNPL-----GQFIARRNNLEPSQLEL 112
FS+H+P P S S +++Y+ NP G F +
Sbjct: 87 LSETESPRLFSSHLPIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNMKFIKKPKSW 146
Query: 113 DEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGK 157
+E FE C G ++G ++H+ G+ + + L L YE LGK
Sbjct: 147 EEYFEWFCQGTVLYGSWFDHIHGW--MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGK 204
Query: 158 PL----VYPILPGNSL------------------------FLRKGEVGNWKNYLSPSMSQ 189
L + IL +S LRKG G+WKN+ + + ++
Sbjct: 205 TLEPEELNLILKNSSFQSMKENKMSNYSLLSVDYVVDKAQLLRKGVSGDWKNHFTVAQAE 264
Query: 190 HLQKVVEEKL 199
K+ +EK+
Sbjct: 265 DFDKLFQEKM 274
>pdb|2QP4|A Chain A, Identification And Characterization Of Two Amino Acids
Critical For The Substrate Inhibition Of Sult2a1
Length = 284
Score = 67.8 bits (164), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 93/250 (37%), Gaps = 64/250 (25%)
Query: 12 RKHFQAEDSDIILAPYPKSGTTWIKAL--------------TFTIVNRSRYAIEDSPLLT 57
R F D D+I+ YPKSGT W+ + + I RS + +
Sbjct: 26 RDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVPIWERSPWVESEIGYTA 85
Query: 58 ASPHQLKDFFSTHVPYASVPSSILESNCRIVYICTNPL-----GQFIARRNNLEPSQLEL 112
S + FS+H+P P S S +++Y+ NP G F +
Sbjct: 86 LSETESPRLFSSHLPIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNWKFIKKPKSW 145
Query: 113 DEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGK 157
+E FE C G ++G ++H+ G+ + + L L YE LGK
Sbjct: 146 EEYFEWFCQGTVLYGSWFDHIHGW--MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGK 203
Query: 158 PL----VYPILPGNSL------------------------FLRKGEVGNWKNYLSPSMSQ 189
L + IL +S LRKG G+WKN+ + + ++
Sbjct: 204 TLEPEELNLILKNSSFQSMKENKMSNYSLLSVDYVVDKTQLLRKGVSGDWKNHFTVAQAE 263
Query: 190 HLQKVVEEKL 199
K+ +EK+
Sbjct: 264 DFDKLFQEKM 273
>pdb|2QP3|A Chain A, Identification And Characterization Of Two Amino Acids
Critical For The Substrate Inhibition Of Sult2a1
Length = 284
Score = 67.0 bits (162), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 58/250 (23%), Positives = 93/250 (37%), Gaps = 64/250 (25%)
Query: 12 RKHFQAEDSDIILAPYPKSGTTWIKAL--------------TFTIVNRSRYAIEDSPLLT 57
R F D D+I+ YPKSGT W+ + + I RS + +
Sbjct: 26 RDEFVIRDEDVIILTYPKSGTNWLAEILCLMHSKGDAKWIQSVPIWERSPWVESEIGYTA 85
Query: 58 ASPHQLKDFFSTHVPYASVPSSILESNCRIVYICTNPL-----GQFIARRNNLEPSQLEL 112
S + FS+H+P P S S +++Y+ NP G F +
Sbjct: 86 LSETESPRLFSSHLPIQLFPKSFFSSKAKVIYLMRNPRDVLVSGYFFWKNIKFIKKPKSW 145
Query: 113 DEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGK 157
+E FE C G ++G ++H+ G+ + + L L YE LGK
Sbjct: 146 EEYFEWFCQGTVLYGSWFDHIHGW--MPMREEKNFLLLSYEELKQDTGRTIEKICQFLGK 203
Query: 158 PL----VYPILPGNSL------------------------FLRKGEVGNWKNYLSPSMSQ 189
L + IL +S LRKG G+WKN+ + + ++
Sbjct: 204 TLEPEELNLILKNSSFQSMKENKMSNYSLLSVDYVVDKTQLLRKGVSGDWKNHFTVAQAE 263
Query: 190 HLQKVVEEKL 199
K+ +EK+
Sbjct: 264 DFDKLFQEKM 273
>pdb|1Z28|A Chain A, Crystal Structures Of Sult1a2 And Sult1a13: Implications
In The Bioactivation Of N-Hydroxy-2-Acetylamino Fluorine
(Oh-Aaf)
Length = 295
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWI--------------KALTFTIVNRSRYAIEDSPLLTASP 60
FQA D++++ YPKSGTTW+ K I R + +P + +
Sbjct: 34 FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFMRVPFLEFKAPGIPSGM 93
Query: 61 HQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIARRN-----NLEPSQL 110
LKD TH+P A +P ++L+ ++VY+ N ++ + + P
Sbjct: 94 ETLKDTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPEPG 153
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK------------- 157
D E+ G +G ++HV +W+ S P +L+L YE++ +
Sbjct: 154 TWDSFLEKFMVGEVSYGSWYQHVQEWWELSRTHP--VLYLFYEDMKENPKREIQKILEFV 211
Query: 158 ------------------------PLV-YPILPGN------SLFLRKGEVGNWKNYLSPS 186
P+ Y +P S F+RKG G+WK + +
Sbjct: 212 GRSLPEETVDFVVQHTSFKEMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVA 271
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
++ EK+ G SL+F++ L
Sbjct: 272 QNERFDADYAEKMAGCSLSFRSEL 295
>pdb|3U3K|A Chain A, Crystal Structure Of Hsult1a1 Bound To Pap And 2-Naphtol
pdb|3U3K|B Chain B, Crystal Structure Of Hsult1a1 Bound To Pap And 2-Naphtol
pdb|3U3M|A Chain A, Crystal Structure Of Human Sult1a1 Bound To Pap And
3-Cyano-7- Hydroxycoumarin
pdb|3U3O|A Chain A, Crystal Structure Of Human Sult1a1 Bound To Pap And Two
3-Cyano-7- Hydroxycoumarin
Length = 315
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWI--------------KALTFTIVNRSRYAIEDSPLLTASP 60
FQA D++++ YPKSGTTW+ K I R + +P + +
Sbjct: 54 FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFMRVPFLEFKAPGIPSGM 113
Query: 61 HQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLEPSQL 110
LKD TH+P A +P ++L+ ++VY+ N ++ + P
Sbjct: 114 ETLKDTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPEPG 173
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK------------- 157
D E+ G +G ++HV +W+ S P +L+L YE++ +
Sbjct: 174 TWDSFLEKFMVGEVSYGSWYQHVQEWWELSRTHP--VLYLFYEDMKENPKREIQKILEFV 231
Query: 158 ------------------------PLV-YPILPGN------SLFLRKGEVGNWKNYLSPS 186
P+ Y +P S F+RKG G+WK + +
Sbjct: 232 GHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVA 291
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
++ EK+ G SL+F++ L
Sbjct: 292 QNERFDADYAEKMAGCSLSFRSEL 315
>pdb|4GRA|A Chain A, Crystal Structure Of Sult1a1 Bound With Pap
pdb|4GRA|B Chain B, Crystal Structure Of Sult1a1 Bound With Pap
Length = 299
Score = 67.0 bits (162), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWI--------------KALTFTIVNRSRYAIEDSPLLTASP 60
FQA D++++ YPKSGTTW+ K I R + +P + +
Sbjct: 38 FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFMRVPFLEFKAPGIPSGM 97
Query: 61 HQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIARRN-----NLEPSQL 110
LKD TH+P A +P ++L+ ++VY+ N ++ + + P
Sbjct: 98 ETLKDTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPEPG 157
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK------------- 157
D E+ G +G ++HV +W+ S P +L+L YE++ +
Sbjct: 158 TWDSFLEKFMVGEVSYGSWYQHVQEWWELSRTHP--VLYLFYEDMKENPKREIQKILEFV 215
Query: 158 ------------------------PLV-YPILPGN------SLFLRKGEVGNWKNYLSPS 186
P+ Y +P S F+RKG G+WK + +
Sbjct: 216 GRSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVA 275
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
++ EK+ G SL+F++ L
Sbjct: 276 QNERFDADYAEKMAGCSLSFRSEL 299
>pdb|1LS6|A Chain A, Human Sult1a1 Complexed With Pap And P-Nitrophenol
pdb|2D06|A Chain A, Human Sult1a1 Complexed With Pap And Estradiol
pdb|2D06|B Chain B, Human Sult1a1 Complexed With Pap And Estradiol
Length = 295
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 104/264 (39%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWI--------------KALTFTIVNRSRYAIEDSPLLTASP 60
FQA D++++ YPKSGTTW+ K I R + +P + +
Sbjct: 34 FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFMRVPFLEFKAPGIPSGM 93
Query: 61 HQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIARRN-----NLEPSQL 110
LKD TH+P A +P ++L+ ++VY+ N ++ + + P
Sbjct: 94 ETLKDTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPEPG 153
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK------------- 157
D E+ G +G ++HV +W+ S P +L+L YE++ +
Sbjct: 154 TWDSFLEKFMVGEVSYGSWYQHVQEWWELSRTHP--VLYLFYEDMKENPKREIQKILEFV 211
Query: 158 ------------------------PLV-YPILPGN------SLFLRKGEVGNWKNYLSPS 186
P+ Y +P S F+RKG G+WK + +
Sbjct: 212 GHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVA 271
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
++ EK+ G SL+F++ L
Sbjct: 272 QNERFDADYAEKMAGCSLSFRSEL 295
>pdb|3U3J|A Chain A, Crystal Structure Of Hsult1a1 Bound To Pap
pdb|3U3J|B Chain B, Crystal Structure Of Hsult1a1 Bound To Pap
Length = 314
Score = 65.1 bits (157), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/262 (22%), Positives = 102/262 (38%), Gaps = 70/262 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWI--------------KALTFTIVNRSRYAIEDSPLLTASP 60
FQA D++++ YPKSGTTW+ K I R + +P + +
Sbjct: 54 FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFMRVPFLEFKAPGIPSGM 113
Query: 61 HQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLEPSQL 110
LKD TH+P A +P ++L+ ++VY+ N ++ + P
Sbjct: 114 ETLKDTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVHPEPG 173
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGK------------- 157
D E+ G +G ++HV +W+ S P +L+L YE++ +
Sbjct: 174 TWDSFLEKFMVGEVSYGSWYQHVQEWWELSRTHP--VLYLFYEDMKENPKREIQKILEFV 231
Query: 158 ------------------------PLV-YPILPGN------SLFLRKGEVGNWKNYLSPS 186
P+ Y +P S F+RKG G+WK + +
Sbjct: 232 GHSLPEETVDFMVQHTSFKEMKKNPMTNYTTVPQEFMDHSISPFMRKGMAGDWKTTFTVA 291
Query: 187 MSQHLQKVVEEKLDGPSLTFKT 208
++ EK+ G SL+F++
Sbjct: 292 QNERFDADYAEKMAGCSLSFRS 313
>pdb|1Z29|A Chain A, Crystal Structures Of Sult1a2 And Sult1a13: Implications
In The Bioactivation Of N-Hydroxy-2-Acetylamino Fluorine
(Oh-Aaf)
Length = 295
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 60/264 (22%), Positives = 103/264 (39%), Gaps = 70/264 (26%)
Query: 15 FQAEDSDIILAPYPKSGTTWI--------------KALTFTIVNRSRYAIEDSPLLTASP 60
FQA D++++ YPKSGTTW+ K I R + P + +
Sbjct: 34 FQARPDDLLISTYPKSGTTWVSQILDMIYQGGDLEKCHRAPIFMRVPFLEFKVPGIPSGM 93
Query: 61 HQLKD-----FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIARRN-----NLEPSQL 110
LK+ TH+P A +P ++L+ ++VY+ N ++ + + P
Sbjct: 94 ETLKNTPAPRLLKTHLPLALLPQTLLDQKVKVVYVARNAKDVAVSYYHFYHMAKVYPHPG 153
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLG---KPLVYPILP-- 165
+ E+ G +G ++HV +W+ S P +L+L YE++ K + IL
Sbjct: 154 TWESFLEKFMAGEVSYGSWYQHVQEWWELSRTHP--VLYLFYEDMKENPKREIQKILEFV 211
Query: 166 GNSL---------------------------------------FLRKGEVGNWKNYLSPS 186
G SL F+RKG G+WK + +
Sbjct: 212 GRSLPEETVDLMVEHTSFKEMKKNPMTNYTTVRREFMDHSISPFMRKGMAGDWKTTFTVA 271
Query: 187 MSQHLQKVVEEKLDGPSLTFKTSL 210
++ EK+ G SL+F++ L
Sbjct: 272 QNERFDADYAEKMAGCSLSFRSEL 295
>pdb|1ZD1|A Chain A, Human Sulfortransferase Sult4a1
pdb|1ZD1|B Chain B, Human Sulfortransferase Sult4a1
Length = 284
Score = 55.8 bits (133), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/250 (22%), Positives = 100/250 (40%), Gaps = 58/250 (23%)
Query: 14 HFQAEDSDIILAPYPKSGTTWIKALTFTIVNRSRYAIEDSPLLTASPHQL---------- 63
+F SD+ + YPKSGT+ ++ + + + S+ A D L QL
Sbjct: 40 NFPVRPSDVWIVTYPKSGTSLLQEVVYLV---SQGADPDEIGLMNIDEQLPVLEYPQPGL 96
Query: 64 ---KDFFS-----THVPYASVPSSILESNCRIVYICTNPLGQFIA-----RRNNLEPSQL 110
K+ S +H+PY +PS + + +++Y+ NP ++ R +
Sbjct: 97 DIIKELTSPRLIKSHLPYRFLPSDLHNGDSKVIYMARNPKDLVVSYYQFHRSLRTMSYRG 156
Query: 111 ELDEAFERTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYENLGKPLVYPI------- 163
E R N +G +EHV +W+ ++ +LFLKYE++ + LV +
Sbjct: 157 TFQEFCRRFMNDKLGYGSWFEHVQEFWEHRMD--SNVLFLKYEDMHRDLVTMVEQLARFL 214
Query: 164 -----------------------LPGNSLFLRKGEVGNWKNYLSPSMSQHLQKVVEEKLD 200
+L + +G VG WK+ + SM++ V ++K+
Sbjct: 215 GVSCDKAQLEALTEHCHQLVDQCCNAEALPVGRGRVGLWKDIFTVSMNEKFDLVYKQKMG 274
Query: 201 GPSLTFKTSL 210
LTF L
Sbjct: 275 KCDLTFDFYL 284
>pdb|1X8J|A Chain A, Crystal Structure Of Retinol Dehydratase In Complex With
Androsterone And Inactive Cofactor Pap
pdb|1X8J|B Chain B, Crystal Structure Of Retinol Dehydratase In Complex With
Androsterone And Inactive Cofactor Pap
pdb|1X8K|A Chain A, Crystal Structure Of Retinol Dehydratase In Complex With
Anhydroretinol And Inactive Cofactor Pap
pdb|1X8K|B Chain B, Crystal Structure Of Retinol Dehydratase In Complex With
Anhydroretinol And Inactive Cofactor Pap
pdb|1X8L|A Chain A, Crystal Structure Of Retinol Dehydratase In Complex With
All-Trans-4-Oxoretinol And Inactive Cofactor Pap
pdb|1X8L|B Chain B, Crystal Structure Of Retinol Dehydratase In Complex With
All-Trans-4-Oxoretinol And Inactive Cofactor Pap
Length = 351
Score = 53.1 bits (126), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 59/253 (23%)
Query: 3 VSVNGVISFRKHFQAEDSDIILAPYPKSGTTWIKALTFTIVNRSRYAIEDSPLLTASPHQ 62
+ ++G + + Q E +DI+ P ++ L ++ SR S LL A P
Sbjct: 104 IYLDGFMIYDPEKQEEYNDILPNPENLDMERYLGLLEYS----SRPG---SSLLAAVPPT 156
Query: 63 LKDFFSTHVPYASVPSSILESNCRIVYICTNPLGQFI-----ARRNNLEPSQLELDEAFE 117
K F TH+P + +P ++L++ ++VY+ +P + AR L Q + +E
Sbjct: 157 EKRFVKTHLPLSLMPPNMLDT-VKMVYLARDPRDVAVSSFHHARLLYLLNKQSNFKDFWE 215
Query: 118 RTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGKPLVYP 162
G++ P +EHV W A P +LFL YE+ LGK L
Sbjct: 216 MFHRGLYTLTPYFEHVKEAW-AKRHDPN-MLFLFYEDYLKDLPGSIARIADFLGKKLSEE 273
Query: 163 -----------------------------ILPGNSLFLRKGEVGNWKNYLSPSMSQHLQK 193
IL F+RKG+ G W++Y M++ +K
Sbjct: 274 QIQRLSEHLNFEKFKNNGAVNMEDYREIGILADGEHFIRKGKAGCWRDYFDEEMTKQAEK 333
Query: 194 VVEEKLDGPSLTF 206
+++ L L +
Sbjct: 334 WIKDNLKDTDLRY 346
>pdb|1FMJ|A Chain A, Crystal Structure Of Mercury Derivative Of Retinol
Dehydratase In A Complex With Retinol And Pap
pdb|1FMJ|B Chain B, Crystal Structure Of Mercury Derivative Of Retinol
Dehydratase In A Complex With Retinol And Pap
pdb|1FML|A Chain A, Crystal Structure Of Retinol Dehydratase In A Complex With
Retinol And Pap
pdb|1FML|B Chain B, Crystal Structure Of Retinol Dehydratase In A Complex With
Retinol And Pap
Length = 351
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/253 (23%), Positives = 100/253 (39%), Gaps = 59/253 (23%)
Query: 3 VSVNGVISFRKHFQAEDSDIILAPYPKSGTTWIKALTFTIVNRSRYAIEDSPLLTASPHQ 62
+ ++G + + Q E +DI+ P ++ L ++ SR S LL A P
Sbjct: 104 IYLDGFMIYDPEKQEEYNDILPNPENLDMERYLGLLEYS----SRPG---SSLLAAVPPT 156
Query: 63 LKDFFSTHVPYASVPSSILESNCRIVYICTNPLGQFI-----ARRNNLEPSQLELDEAFE 117
K F TH+P + +P ++L++ ++VY+ +P + AR L Q + +E
Sbjct: 157 EKRFVKTHLPLSLMPPNMLDT-VKMVYLARDPRDVAVSSFHHARLLYLLNKQSNFKDFWE 215
Query: 118 RTCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGKPLVYP 162
G++ P +EHV W A P +LFL YE+ LGK L
Sbjct: 216 MFHRGLYTLTPYFEHVKEAW-AKRHDPN-MLFLFYEDYLKDLPGCIARIADFLGKKLSEE 273
Query: 163 -----------------------------ILPGNSLFLRKGEVGNWKNYLSPSMSQHLQK 193
IL F+RKG+ G W++Y M++ +K
Sbjct: 274 QIQRLCEHLNFEKFKNNGAVNMEDYREIGILADGEHFIRKGKAGCWRDYFDEEMTKQAEK 333
Query: 194 VVEEKLDGPSLTF 206
+++ L L +
Sbjct: 334 WIKDNLKDTDLRY 346
>pdb|1Q1Z|A Chain A, Crystal Structure Of Human Cholesterol Sulfotransferase
(Sult2b1b) In The Presence Of Pap
pdb|1Q20|A Chain A, Crystal Structure Of Human Cholesterol Sulfotransferase
(Sult2b1b) In The Presence Of Pap And Pregnenolone
pdb|1Q22|A Chain A, Crystal Structure Of Human Cholesterol Sulfotransferase
(sult2b1b) In The Presence Of Dhea And Pap
Length = 299
Score = 51.2 bits (121), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/247 (22%), Positives = 95/247 (38%), Gaps = 65/247 (26%)
Query: 18 EDSDIILAPYPKSGTTWIKALTFTIVNRSRYA-IEDSPLLTASP--------HQLKD--- 65
D DI + YPKSGTTW+ + I+ + I P+ +P L D
Sbjct: 46 RDDDIFIITYPKSGTTWMIEIICLILKEGDPSWIRSVPIWERAPWCETIVGAFSLPDQYS 105
Query: 66 --FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIARRNNLE-PSQLEL----DEAFER 118
S+H+P + S +++Y+ NP ++ + + QL+ D+
Sbjct: 106 PRLMSSHLPIQIFTKAFFSSKAKVIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRD 165
Query: 119 TCNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGKPLV--- 160
G FG ++H+ G+ + ++ LF+ YE LG+PL
Sbjct: 166 FLKGEVQFGSWFDHIKGWLR--MKGKDNFLFITYEELQQDLQGSVERICGFLGRPLGKEA 223
Query: 161 --------------------YPILPGNSL------FLRKGEVGNWKNYLSPSMSQHLQKV 194
Y +LP + L FLRKG G+WKN+ + + S+ +
Sbjct: 224 LGSVVAHSTFSAMKANTMSNYTLLPPSLLDHRRGAFLRKGVCGDWKNHFTVAQSEAFDRA 283
Query: 195 VEEKLDG 201
+++ G
Sbjct: 284 YRKQMRG 290
>pdb|1Q1Q|A Chain A, Crystal Structure Of Human Pregnenolone Sulfotransferase
(Sult2b1a) In The Presence Of Pap
Length = 350
Score = 50.1 bits (118), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/246 (22%), Positives = 95/246 (38%), Gaps = 65/246 (26%)
Query: 19 DSDIILAPYPKSGTTWIKALTFTIVNRSRYA-IEDSPLLTASP--------HQLKD---- 65
D DI + YPKSGTTW+ + I+ + I P+ +P L D
Sbjct: 45 DDDIFIITYPKSGTTWMIEIICLILKEGDPSWIRSVPIWERAPWCETIVGAFSLPDQYSP 104
Query: 66 -FFSTHVPYASVPSSILESNCRIVYICTNPLGQFIARRNNLE-PSQLE----LDEAFERT 119
S+H+P + S +++Y+ NP ++ + + QL+ D+
Sbjct: 105 RLMSSHLPIQIFTKAFFSSKAKVIYMGRNPRDVVVSLYHYSKIAGQLKDPGTPDQFLRDF 164
Query: 120 CNGIHVFGPIWEHVLGYWKASIEQPGKILFLKYEN---------------LGKPLV---- 160
G FG ++H+ G+ + ++ LF+ YE LG+PL
Sbjct: 165 LKGEVQFGSWFDHIKGWLR--MKGKDNFLFITYEELQQDLQGSVERICGFLGRPLGKEAL 222
Query: 161 -------------------YPILPGNSL------FLRKGEVGNWKNYLSPSMSQHLQKVV 195
Y +LP + L FLRKG G+WKN+ + + S+ +
Sbjct: 223 GSVVAHSTFSAMKANTMSNYTLLPPSLLDHRRGAFLRKGVCGDWKNHFTVAQSEAFDRAY 282
Query: 196 EEKLDG 201
+++ G
Sbjct: 283 RKQMRG 288
>pdb|2WZK|A Chain A, Structure Of The Cul5 N-Terminal Domain At 2.05a
Resolution
Length = 391
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 38/87 (43%), Gaps = 12/87 (13%)
Query: 33 TWIKALTFTIVNRSRYAIEDSPLLTASPHQLKDFFSTHVPYASVPSSILESNCRIVYICT 92
TW +++ I NR ++DS + +L + F + + S V +C+
Sbjct: 142 TWNESIFSNIKNR----LQDSAMKLVHAERLGEAFDSQLVIGVRES--------YVNLCS 189
Query: 93 NPLGQFIARRNNLEPSQLELDEAFERT 119
NP + R+N E + L+ E F RT
Sbjct: 190 NPEDKLQIYRDNFEKAYLDSTERFYRT 216
>pdb|4E97|A Chain A, T4 Lysozyme L99aM102H WITH 2-Mercaptoethanol Bound
pdb|4E97|B Chain B, T4 Lysozyme L99aM102H WITH 2-Mercaptoethanol Bound
pdb|4EKP|A Chain A, T4 Lysozyme L99aM102H WITH NITROBENZENE BOUND
pdb|4EKP|B Chain B, T4 Lysozyme L99aM102H WITH NITROBENZENE BOUND
pdb|4EKQ|A Chain A, T4 Lysozyme L99aM102H WITH 4-Nitrophenol Bound
pdb|4EKQ|B Chain B, T4 Lysozyme L99aM102H WITH 4-Nitrophenol Bound
pdb|4EKR|A Chain A, T4 Lysozyme L99aM102H WITH 2-Cyanophenol Bound
pdb|4EKR|B Chain B, T4 Lysozyme L99aM102H WITH 2-Cyanophenol Bound
pdb|4EKS|A Chain A, T4 Lysozyme L99aM102H WITH ISOXAZOLE BOUND
pdb|4EKS|B Chain B, T4 Lysozyme L99aM102H WITH ISOXAZOLE BOUND
Length = 187
Score = 28.1 bits (61), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 52 IGHLLTKSPDLNAAKSELDKAIGRNCNGV 80
>pdb|4EXM|A Chain A, The Crystal Structure Of An Engineered Phage Lysin
Containing The Binding Domain Of Pesticin And The
Killing Domain Of T4-Lysozyme
pdb|4EXM|B Chain B, The Crystal Structure Of An Engineered Phage Lysin
Containing The Binding Domain Of Pesticin And The
Killing Domain Of T4-Lysozyme
pdb|4EXM|C Chain C, The Crystal Structure Of An Engineered Phage Lysin
Containing The Binding Domain Of Pesticin And The
Killing Domain Of T4-Lysozyme
pdb|4EXM|D Chain D, The Crystal Structure Of An Engineered Phage Lysin
Containing The Binding Domain Of Pesticin And The
Killing Domain Of T4-Lysozyme
Length = 347
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/87 (24%), Positives = 40/87 (45%), Gaps = 7/87 (8%)
Query: 44 NRSRYAIEDSPLLT-ASPHQLKDFFSTHVPYASVPSSILESNCRI-VYICTNP-----LG 96
NR+R + D+ ++ + QLK+F V ++ R+ +Y T +G
Sbjct: 154 NRNRIVLADNTVINFDNISQLKEFLRRSVNIVIFEMLRIDERLRLKIYKDTEGYYTIGIG 213
Query: 97 QFIARRNNLEPSQLELDEAFERTCNGI 123
+ + +L ++ ELD+A R NG+
Sbjct: 214 HLLTKSPSLNAAKSELDKAIGRNTNGV 240
>pdb|3HUQ|A Chain A, Thieno[3,2-B]thiophene In Complex With T4 Lysozyme
L99aM102Q
Length = 162
Score = 28.1 bits (61), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPDLNAAKSELDKAIGRNCNGV 57
>pdb|1L19|A Chain A, Enhanced Protein Thermostability From Designed Mutations
That Interact With Alpha-helix Dipoles
Length = 164
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPDLNAAKSELDKAIGRNCNGV 57
>pdb|3HT6|A Chain A, 2-Methylphenol In Complex With T4 Lysozyme L99aM102Q
pdb|3HT7|A Chain A, 2-Ethylphenol In Complex With T4 Lysozyme L99aM102Q
pdb|3HT8|A Chain A, 5-chloro-2-methylphenol In Complex With T4 Lysozyme
L99a/m102q
pdb|3HT9|A Chain A, 2-Methoxyphenol In Complex With T4 Lysozyme L99aM102Q
pdb|3HTB|A Chain A, 2-Propylphenol In Complex With T4 Lysozyme L99aM102Q
pdb|3HTD|A Chain A, (Z)-Thiophene-2-Carboxaldoxime In Complex With T4 Lysozyme
L99aM102Q
pdb|3HTF|A Chain A, 4-Chloro-1h-Pyrazole In Complex With T4 Lysozyme L99aM102Q
pdb|3HTG|A Chain A, 2-Ethoxy-3,4-Dihydro-2h-Pyran In Complex With T4 Lysozyme
L99aM102Q
pdb|3HU8|A Chain A, 2-Ethoxyphenol In Complex With T4 Lysozyme L99aM102Q
pdb|3HU9|A Chain A, Nitrosobenzene In Complex With T4 Lysozyme L99aM102Q
pdb|3HUA|A Chain A, 4,5,6,7-Tetrahydroindole In Complex With T4 Lysozyme
L99aM102Q
pdb|3HUK|A Chain A, Benzylacetate In Complex With T4 Lysozyme L99aM102Q
Length = 164
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPDLNAAKSELDKAIGRNCNGV 57
>pdb|3GUJ|A Chain A, T4 Lysozyme M102eL99A MUTANT WITH BURIED CHARGE IN APOLAR
CAVITY-- Benzene Binding
pdb|3GUK|A Chain A, T4 Lysozyme M102eL99A MUTANT WITH BURIED CHARGE IN APOLAR
CAVITY-- Toluene Binding
pdb|3GUK|B Chain B, T4 Lysozyme M102eL99A MUTANT WITH BURIED CHARGE IN APOLAR
CAVITY-- Toluene Binding
pdb|3GUL|A Chain A, T4 Lysozyme M102eL99A MUTANT WITH BURIED CHARGE IN APOLAR
CAVITY-- Ethylbenzene Binding
pdb|3GUL|B Chain B, T4 Lysozyme M102eL99A MUTANT WITH BURIED CHARGE IN APOLAR
CAVITY-- Ethylbenzene Binding
pdb|3GUM|A Chain A, T4 Lysozyme M102eL99A MUTANT WITH BURIED CHARGE IN APOLAR
CAVITY--P- Xylene Binding
pdb|3GUM|B Chain B, T4 Lysozyme M102eL99A MUTANT WITH BURIED CHARGE IN APOLAR
CAVITY--P- Xylene Binding
pdb|3GUN|A Chain A, T4 Lysozyme M102eL99A MUTANT WITH BURIED CHARGE IN APOLAR
CAVITY-- Aniline Binding
pdb|3GUN|B Chain B, T4 Lysozyme M102eL99A MUTANT WITH BURIED CHARGE IN APOLAR
CAVITY-- Aniline Binding
pdb|3GUO|A Chain A, T4 Lysozyme M102e/l99a Mutant With Buried Charge In Apolar
Cavity-- Phenol Binding
pdb|3GUO|B Chain B, T4 Lysozyme M102e/l99a Mutant With Buried Charge In Apolar
Cavity-- Phenol Binding
pdb|3GUP|A Chain A, T4 Lysozyme M102e/l99a Mutant With Buried Charge In Apolar
Cavity-- Pyridine Binding
pdb|3GUP|B Chain B, T4 Lysozyme M102e/l99a Mutant With Buried Charge In Apolar
Cavity-- Pyridine Binding
Length = 164
Score = 28.1 bits (61), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 92 TNPLGQFIARRNNLEPSQLELDEAFERTCNGI 123
T +G + + +L ++ ELD+A R CNG+
Sbjct: 26 TIGIGHLLTKSPDLNAAKSELDKAIGRNCNGV 57
>pdb|3FAD|A Chain A, Evaulaution At Atomic Resolution Of The Role Of Strain In
Destabilizing The Temperature Sensitive T4 Lysozyme
Mutant Arg96-->his
Length = 164
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3C7Z|A Chain A, T4 Lysozyme Mutant D89aR96H AT ROOM TEMPERATURE
Length = 164
Score = 27.7 bits (60), Expect = 4.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L72|A Chain A, Multiple Stabilizing Alanine Replacements Within Alpha-
Helix 126-134 Of T4 Lysozyme Have Independent, Additive
Effects On Both Structure And Stability
Length = 164
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L34|A Chain A, High-Resolution Structure Of The Temperature-Sensitive
Mutant Of Phage Lysozyme, Arg 96 (Right Arrow) His
pdb|3F8V|A Chain A, Evaulaution At Atomic Resolution Of The Role Of Strain In
Destabilizing The Temperature Sensitive T4 Lysozyme
Mutant Arg96-->his
Length = 164
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3C82|A Chain A, Bacteriophage Lysozyme T4 Lysozyme Mutant K85aR96H
Length = 164
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3CDQ|A Chain A, Contributions Of All 20 Amino Acids At Site 96 To The
Stability And Structure Of T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3CDO|A Chain A, Bacteriophage T4 Lysozyme Mutant R96v In Wildtype
Background At Low Temperature
pdb|3CDO|B Chain B, Bacteriophage T4 Lysozyme Mutant R96v In Wildtype
Background At Low Temperature
pdb|3CDO|C Chain C, Bacteriophage T4 Lysozyme Mutant R96v In Wildtype
Background At Low Temperature
pdb|3CDO|D Chain D, Bacteriophage T4 Lysozyme Mutant R96v In Wildtype
Background At Low Temperature
Length = 164
Score = 27.7 bits (60), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3CDV|A Chain A, Contributions Of All 20 Amino Acids At Site 96 To The
Stability And Structure Of T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3C80|A Chain A, T4 Lysozyme Mutant R96y At Room Temperature
Length = 164
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3C7Y|A Chain A, Mutant R96a Of T4 Lysozyme In Wildtype Background At 298k
Length = 164
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3C7W|A Chain A, Contributions Of All 20 Amino Acids At Site 96 To The
Stability And Structure Of T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L99|A Chain A, Perturbation Of Trp 138 In T4 Lysozyme By Mutations At Gln
105 Used To Correlate Changes In Structure, Stability,
Solvation, And Spectroscopic Properties
Length = 164
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3FI5|A Chain A, Crystal Structure Of T4 Lysozyme Mutant R96w
pdb|3FI5|B Chain B, Crystal Structure Of T4 Lysozyme Mutant R96w
pdb|3FI5|C Chain C, Crystal Structure Of T4 Lysozyme Mutant R96w
pdb|3FI5|D Chain D, Crystal Structure Of T4 Lysozyme Mutant R96w
Length = 164
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3C8R|A Chain A, Contributions Of All 20 Amino Acids At Site 96 To
Stability And Structure Of T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|169L|A Chain A, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
pdb|169L|B Chain B, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
pdb|169L|C Chain C, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
pdb|169L|D Chain D, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
pdb|169L|E Chain E, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L09|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L49|A Chain A, Structural And Thermodynamic Analysis Of The Packing Of
Two Alpha- Helices In Bacteriophage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L71|A Chain A, Multiple Stabilizing Alanine Replacements Within Alpha-
Helix 126-134 Of T4 Lysozyme Have Independent, Additive
Effects On Both Structure And Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L00|A Chain A, Perturbation Of Trp 138 In T4 Lysozyme By Mutations At Gln
105 Used To Correlate Changes In Structure, Stability,
Solvation, And Spectroscopic Properties
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3CDT|A Chain A, Contributions Of All 20 Amino Acids At Site 96 To The
Stability And Structure Of T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L24|A Chain A, Enhanced Protein Thermostability From Site-directed
Mutations That Decrease The Entropy Of Unfolding
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1SWY|A Chain A, Use Of A Halide Binding Site To Bypass The 1000-Atom Limit
To Ab Initio Structure Determination
pdb|1SX2|A Chain A, Use Of A Halide Binding Site To Bypass The 1000-Atom Limit
To Structure Determination By Direct Methods
pdb|1SX7|A Chain A, Use Of An Ion-Binding Site To Bypass The 1000-Atom Limit
To Ab Initio Structure Determination By Direct Methods
pdb|1SWZ|A Chain A, Use Of An Ion-Binding Site To Bypass The 1000-Atom Limit
To Ab Initio Structure Determination By Direct Methods
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L17|A Chain A, Hydrophobic Stabilization In T4 Lysozyme Determined
Directly By Multiple Substitutions Of Ile 3
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3FA0|A Chain A, Evaulaution At Atomic Resolution Of The Role Of Strain In
Destabilizing The Temperature Sensitive T4 Lysozyme
Mutant Arg96-->his
Length = 162
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3C8Q|A Chain A, Contribution Of All 20 Amino Acids At Site 96 To The
Stability And Structure Of T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1T6H|A Chain A, Crystal Structure T4 Lysozyme Incorporating An Unnatural
Amino Acid P-Iodo-L-Phenylalanine At Position 153
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L14|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L48|A Chain A, Structural And Thermodynamic Analysis Of The Packing Of
Two Alpha- Helices In Bacteriophage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L52|A Chain A, Structural And Thermodynamic Analysis Of The Packing Of
Two Alpha- Helices In Bacteriophage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L56|A Chain A, Analysis Of The Interaction Between Charged Side Chains
And The Alpha-helix Dipole Using Designed Thermostable
Mutants Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3F9L|A Chain A, Evaulaution At Atomic Resolution Of The Role Of Strain In
Destabilizing The Temperature Sensitive T4 Lysozyme
Mutant Arg96-->his
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3C83|A Chain A, Bacteriophage T4 Lysozyme Mutant D89a In Wildtype
Background At Room Temperature
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L51|A Chain A, Structural And Thermodynamic Analysis Of The Packing Of
Two Alpha- Helices In Bacteriophage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L97|A Chain A, Structure Of A Hinge-Bending Bacteriophage T4 Lysozyme
Mutant, Ile3-> Pro
pdb|1L97|B Chain B, Structure Of A Hinge-Bending Bacteriophage T4 Lysozyme
Mutant, Ile3-> Pro
pdb|1L96|A Chain A, Structure Of A Hinge-bending Bacteriophage T4 Lysozyme
Mutant, Ile3-> Pro
Length = 164
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L15|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L10|A Chain A, Structural Studies Of Mutants Of The Lysozyme Of
Bacteriophage T4. The Temperature-Sensitive Mutant
Protein Thr157 (Right Arrow) Ile
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|150L|A Chain A, Conservation Of Solvent-Binding Sites In 10 Crystal Forms
Of T4 Lysozyme
pdb|150L|B Chain B, Conservation Of Solvent-Binding Sites In 10 Crystal Forms
Of T4 Lysozyme
pdb|150L|C Chain C, Conservation Of Solvent-Binding Sites In 10 Crystal Forms
Of T4 Lysozyme
pdb|150L|D Chain D, Conservation Of Solvent-Binding Sites In 10 Crystal Forms
Of T4 Lysozyme
pdb|256L|A Chain A, Bacteriophage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1C69|A Chain A, T4 Lysozyme Mutant C54tC97AL133A IN THE PRESENCE OF 8 ATM
Argon
pdb|1C6A|A Chain A, T4 Lysozyme Mutant C54tC97AL133A IN THE PRESENCE OF 8 ATM
Krypton
pdb|1C6B|A Chain A, T4 Lysozyme Mutant C54tC97AL133A IN THE PRESENCE OF 8 ATM
Xenon
pdb|1L69|A Chain A, Multiple Stabilizing Alanine Replacements Within Alpha-
Helix 126-134 Of T4 Lysozyme Have Independent, Additive
Effects On Both Structure And Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1DYE|A Chain A, Determination Of Alpha-Helix Propensity Within The Context
Of A Folded Protein: Sites 44 And 131 In Bacteriophage
T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|223L|A Chain A, Generating Ligand Binding Sites In T4 Lysozyme Using
Deficiency-Creating Substitutions
pdb|225L|A Chain A, Generating Ligand Binding Sites In T4 Lysozyme Using
Deficiency-Creating Substitutions
pdb|226L|A Chain A, Generating Ligand Binding Sites In T4 Lysozyme Using
Deficiency-Creating Substitutions
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L75|A Chain A, Multiple Stabilizing Alanine Replacements Within Alpha-
Helix 126-134 Of T4 Lysozyme Have Independent, Additive
Effects On Both Structure And Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|2RBN|A Chain A, N-Phenylglycinonitrile In Complex With T4 Lysozyme
L99aM102Q
pdb|2RBO|A Chain A, 2-Nitrothiophene In Complex With T4 Lysozyme L99aM102Q
pdb|2RBP|A Chain A, 2-(N-Propylthio)ethanol In Complex With T4 Lysozyme
L99aM102Q
pdb|2RBQ|A Chain A, 3-Methylbenzylazide In Complex With T4 L99aM102Q
pdb|2RBR|A Chain A, 2-Phenoxyethanol In Complex With T4 Lysozyme L99aM102Q
pdb|2RBS|A Chain A, (r)(+)-3-chloro-1-phenyl-1-propanol In Complex With T4
Lysozyme L99a/m102q
Length = 162
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1LYD|A Chain A, Crystal Structure Of T4-Lysozyme Generated From Synthetic
Coding Dna Expressed In Escherichia Coli
pdb|2LZM|A Chain A, Structure Of Bacteriophage T4 Lysozyme Refined At 1.7
Angstroms Resolution
pdb|3LZM|A Chain A, Structural Studies Of Mutants Of T4 Lysozyme That Alter
Hydrophobic Stabilization
pdb|4LZM|A Chain A, Comparison Of The Crystal Structure Of Bacteriophage T4
Lysozyme At Low, Medium, And High Ionic Strengths
pdb|5LZM|A Chain A, Comparison Of The Crystal Structure Of Bacteriophage T4
Lysozyme At Low, Medium, And High Ionic Strengths
pdb|6LZM|A Chain A, Comparison Of The Crystal Structure Of Bacteriophage T4
Lysozyme At Low, Medium, And High Ionic Strengths
pdb|7LZM|A Chain A, Comparison Of The Crystal Structure Of Bacteriophage T4
Lysozyme At Low, Medium, And High Ionic Strengths
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|168L|A Chain A, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
pdb|168L|B Chain B, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
pdb|168L|C Chain C, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
pdb|168L|D Chain D, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
pdb|168L|E Chain E, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1DYC|A Chain A, Determination Of Alpha-Helix Propensity Within The Context
Of A Folded Protein: Sites 44 And 131 In Bacteriophage
T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L73|A Chain A, Multiple Stabilizing Alanine Replacements Within Alpha-
Helix 126-134 Of T4 Lysozyme Have Independent, Additive
Effects On Both Structure And Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L01|A Chain A, Structural Studies Of Mutants Of The Lysozyme Of
Bacteriophage T4. The Temperature-Sensitive Mutant
Protein Thr157 (Right Arrow) Ile
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L44|A Chain A, Cumulative Site-Directed Charge-Change Replacements In
Bacteriophage T4 Lysozyme Suggest That Long-Range
Electrostatic Interactions Contribute Little To Protein
Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L74|A Chain A, Multiple Stabilizing Alanine Replacements Within Alpha-
Helix 126-134 Of T4 Lysozyme Have Independent, Additive
Effects On Both Structure And Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L20|A Chain A, Enhanced Protein Thermostability From Designed Mutations
That Interact With Alpha-helix Dipoles
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3C81|A Chain A, Mutant K85a Of T4 Lysozyme In Wildtype Background At Room
Temperature
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3C8S|A Chain A, Contributions Of All 20 Amino Acids At Site 96 To The
Stability And Structure Of T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L70|A Chain A, Multiple Stabilizing Alanine Replacements Within Alpha-
Helix 126-134 Of T4 Lysozyme Have Independent, Additive
Effects On Both Structure And Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L36|A Chain A, Toward A Simplification Of The Protein Folding Problem: A
Stabilizing Polyalanine Alpha-Helix Engineered In T4
Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L57|A Chain A, Analysis Of The Interaction Between Charged Side Chains
And The Alpha-Helix Dipole Using Designed Thermostable
Mutants Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L11|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L47|A Chain A, Cumulative Site-Directed Charge-Change Replacements In
Bacteriophage T4 Lysozyme Suggest That Long-Range
Electrostatic Interactions Contribute Little To Protein
Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|149L|A Chain A, Conservation Of Solvent-Binding Sites In 10 Crystal Forms
Of T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L02|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L18|A Chain A, Hydrophobic Stabilization In T4 Lysozyme Determined
Directly By Multiple Substitutions Of Ile 3
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L38|A Chain A, Contributions Of Engineered Surface Salt Bridges To The
Stability Of T4 Lysozyme Determined By Directed
Mutagenesis
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L23|A Chain A, Enhanced Protein Thermostability From Site-Directed
Mutations That Decrease The Entropy Of Unfolding
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L08|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L98|A Chain A, Perturbation Of Trp 138 In T4 Lysozyme By Mutations At Gln
105 Used To Correlate Changes In Structure, Stability,
Solvation, And Spectroscopic Properties
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3CDR|A Chain A, R96q Mutant Of Wildtype Phage T4 Lysozyme At 298 K
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L29|A Chain A, Replacements Of Pro86 In Phage T4 Lysozyme Extend An
Alpha-Helix But Do Not Alter Protein Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L60|A Chain A, Analysis Of The Interaction Between Charged Side Chains
And The Alpha-Helix Dipole Using Designed Thermostable
Mutants Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L22|A Chain A, Contributions Of Left-Handed Helical Residues To The
Structure And Stability Of Bacteriophage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1DYF|A Chain A, Determination Of Alpha-Helix Propensity Within The Context
Of A Folded Protein: Sites 44 And 131 In Bacteriophage
T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L32|A Chain A, Replacements Of Pro86 In Phage T4 Lysozyme Extend An
Alpha-Helix But Do Not Alter Protein Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1DYD|A Chain A, Determination Of Alpha-Helix Propensity Within The Context
Of A Folded Protein: Sites 44 And 131 In Bacteriophage
T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L33|A Chain A, Contributions Of Left-Handed Helical Residues To The
Structure And Stability Of Bacteriophage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L12|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1LGU|A Chain A, T4 Lysozyme Mutant L99aM102Q
pdb|1LGW|A Chain A, T4 Lysozyme Mutant L99aM102Q BOUND BY 2-Fluoroaniline
pdb|1LGX|A Chain A, T4 Lysozyme Mutant L99aM102Q BOUND BY 3,5-Difluoroaniline
pdb|1LI2|A Chain A, T4 Lysozyme Mutant L99aM102Q BOUND BY PHENOL
pdb|1LI3|A Chain A, T4 Lysozyme Mutant L99aM102Q BOUND BY 3-Chlorophenol
pdb|1LI6|A Chain A, T4 Lysozyme Mutant L99aM102Q BOUND BY 5-Methylpyrrole
pdb|1OV5|A Chain A, T4 Lysozyme Cavity Mutant L99aM102Q BOUND WITH 2-
Allylphenol
pdb|1OV7|A Chain A, T4 Lysozyme Cavity Mutant L99aM102Q BOUND WITH 2-Allyl-6-
Methyl-Phenol
pdb|1OVH|A Chain A, T4 Lysozyme Cavity Mutant L99aM102Q BOUND WITH 2-Chloro-6-
Methyl-Aniline
pdb|1OVJ|A Chain A, T4 Lysozyme Cavity Mutant L99a/m102q Bound With
3-fluoro-2- Methyl_aniline
pdb|1OVK|A Chain A, T4 Lysozyme Cavity Mutant L99aM102Q BOUND WITH N-Allyl-
Aniline
pdb|1OWY|A Chain A, T4 Lysozyme Cavity Mutant L99a/m102q Bound With 2-propyl-
Aniline
pdb|1OWZ|A Chain A, T4 Lysozyme Cavity Mutant L99aM102Q BOUND WITH 4-
Fluorophenethyl Alcohol
pdb|1XEP|A Chain A, Catechol In Complex With T4 Lysozyme L99aM102Q
Length = 164
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L04|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
pdb|1L05|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1DYB|A Chain A, Determination Of Alpha-Helix Propensity Within The Context
Of A Folded Protein: Sites 44 And 131 In Bacteriophage
T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L25|A Chain A, Replacements Of Pro86 In Phage T4 Lysozyme Extend An
Alpha-Helix But Do Not Alter Protein Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1D9W|A Chain A, Bacteriophage T4 Lysozyme Mutant
Length = 164
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L50|A Chain A, Structural And Thermodynamic Analysis Of The Packing Of
Two Alpha- Helices In Bacteriophage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L07|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L58|A Chain A, Analysis Of The Interaction Between Charged Side Chains
And The Alpha-Helix Dipole Using Designed Thermostable
Mutants Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L28|A Chain A, Replacements Of Pro86 In Phage T4 Lysozyme Extend An
Alpha-Helix But Do Not Alter Protein Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 92 TNPLGQFIARRNNLEPSQLELDEAFERTCNGI 123
T +G + + +L ++ ELD+A R CNG+
Sbjct: 26 TIGIGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L53|A Chain A, Structural And Thermodynamic Analysis Of The Packing Of
Two Alpha- Helices In Bacteriophage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L06|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L37|A Chain A, Contributions Of Engineered Surface Salt Bridges To The
Stability Of T4 Lysozyme Determined By Directed
Mutagenesis
Length = 164
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L30|A Chain A, Replacements Of Pro86 In Phage T4 Lysozyme Extend An
Alpha-Helix But Do Not Alter Protein Stability
Length = 164
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L16|A Chain A, Structural Analysis Of The Temperature-Sensitive Mutant Of
Bacteriophage T4 Lysozyme, Glycine 156 (Right Arrow)
Aspartic Acid
Length = 164
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L45|A Chain A, Cumulative Site-Directed Charge-Change Replacements In
Bacteriophage T4 Lysozyme Suggest That Long-Range
Electrostatic Interactions Contribute Little To Protein
Stability
Length = 164
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L46|A Chain A, Cumulative Site-Directed Charge-Change Replacements In
Bacteriophage T4 Lysozyme Suggest That Long-Range
Electrostatic Interactions Contribute Little To Protein
Stability
Length = 164
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L42|A Chain A, Cumulative Site-Directed Charge-Change Replacements In
Bacteriophage T4 Lysozyme Suggest That Long-Range
Electrostatic Interactions Contribute Little To Protein
Stability
pdb|1L43|A Chain A, Cumulative Site-Directed Charge-Change Replacements In
Bacteriophage T4 Lysozyme Suggest That Long-Range
Electrostatic Interactions Contribute Little To Protein
Stability
Length = 164
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L03|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|172L|A Chain A, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
Length = 164
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L27|A Chain A, Replacements Of Pro86 In Phage T4 Lysozyme Extend An
Alpha-Helix But Do Not Alter Protein Stability
Length = 164
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1DYA|A Chain A, Determination Of Alpha-Helix Propensity Within The Context
Of A Folded Protein: Sites 44 And 131 In Bacteriophage
T4 Lysozyme
Length = 164
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L13|A Chain A, Contributions Of Hydrogen Bonds Of Thr 157 To The
Thermodynamic Stability Of Phage T4 Lysozyme
Length = 164
Score = 27.3 bits (59), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1DYG|A Chain A, Determination Of Alpha-Helix Propensity Within The Context
Of A Folded Protein: Sites 44 And 131 In Bacteriophage
T4 Lysozyme
Length = 164
Score = 27.3 bits (59), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|3M07|A Chain A, 1.4 Angstrom Resolution Crystal Structure Of Putative
Alpha Amylase From Salmonella Typhimurium
Length = 618
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 7/64 (10%)
Query: 127 GPIWEHVLGYWKASIEQPGKILFLKYENLGKPLVYPILPGNSLFLRKGEVGNWKNYLSPS 186
G + + G+ S PG L L ++ P LPG +LF W N + S
Sbjct: 549 GTVLQTAPGFIAVSWRFPGGTLSLALNISATTVLLPDLPGKTLFA-------WPNESTGS 601
Query: 187 MSQH 190
+SQH
Sbjct: 602 LSQH 605
>pdb|189L|A Chain A, Enhancement Of Protein Stability By The Combination Of
Point Mutations In T4 Lysozyme Is Additive
Length = 164
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPDLNVAKSELDKAIGRNCNGV 57
>pdb|1L31|A Chain A, Replacements Of Pro86 In Phage T4 Lysozyme Extend An
Alpha-Helix But Do Not Alter Protein Stability
Length = 164
Score = 27.3 bits (59), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|1L26|A Chain A, Replacements Of Pro86 In Phage T4 Lysozyme Extend An
Alpha-helix But Do Not Alter Protein Stability
Length = 164
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
>pdb|2OV8|A Chain A, Crystal Structure Of Stal
pdb|2OVB|A Chain A, Crystal Structure Of Stal-Sulfate Complex
pdb|2OVF|A Chain A, Crystal Structure Of Stal-Pap Complex
Length = 288
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 32/164 (19%)
Query: 24 LAPYPKSGTTWIKALTFTIVNRSRYAIEDSPLLTAS-PHQLKDFFSTHVPYASVPSSIL- 81
+A YPK+G W++ + + V +E P + A PH P A +L
Sbjct: 25 IASYPKAGGHWLRCMLTSYVTGE--PVETWPGIQAGVPHLEGLLRDGEAPSADPDEQVLL 82
Query: 82 ---------------ESNCRIVYICTNPLGQFIA--RRNNLEPSQLELDEAFERTCNGIH 124
ES ++V + NP ++ R + P +E T
Sbjct: 83 ATHFTADRPVLRFYRESTAKVVCLIRNPRDAMLSLMRMKGIPPEDVEACRKIAETFIADE 142
Query: 125 VFGPI--------WEHVLGYWKASIEQP---GKILFLKYENLGK 157
F + W + W S+ + +L ++YE+L K
Sbjct: 143 GFSSVRIWAGEGSWPENIRSWTDSVHESFPNAAVLAVRYEDLRK 186
>pdb|4EEC|A Chain A, Crystal Structure Of The Glycopeptide Antibiotic
Sulfotransferase Stal Complexed With A3p And
Desulfo-A47934.
pdb|4EEC|B Chain B, Crystal Structure Of The Glycopeptide Antibiotic
Sulfotransferase Stal Complexed With A3p And
Desulfo-A47934
Length = 286
Score = 27.3 bits (59), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 33/164 (20%), Positives = 57/164 (34%), Gaps = 32/164 (19%)
Query: 24 LAPYPKSGTTWIKALTFTIVNRSRYAIEDSPLLTAS-PHQLKDFFSTHVPYASVPSSIL- 81
+A YPK+G W++ + + V +E P + A PH P A +L
Sbjct: 23 IASYPKAGGHWLRCMLTSYVTGE--PVETWPGIQAGVPHLEGLLRDGEAPSADPDEQVLL 80
Query: 82 ---------------ESNCRIVYICTNPLGQFIA--RRNNLEPSQLELDEAFERTCNGIH 124
ES ++V + NP ++ R + P +E T
Sbjct: 81 ATHFTADRPVLRFYRESTAKVVCLIRNPRDAMLSLMRMKGIPPEDVEACRKIAETFIADE 140
Query: 125 VFGPI--------WEHVLGYWKASIEQP---GKILFLKYENLGK 157
F + W + W S+ + +L ++YE+L K
Sbjct: 141 GFSSVRIWAGEGSWPENIRSWTDSVHESFPNAAVLAVRYEDLRK 184
>pdb|173L|A Chain A, Protein Flexibility And Adaptability Seen In 25 Crystal
Forms Of T4 Lysozyme
Length = 164
Score = 27.3 bits (59), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 18/29 (62%)
Query: 95 LGQFIARRNNLEPSQLELDEAFERTCNGI 123
+G + + +L ++ ELD+A R CNG+
Sbjct: 29 IGHLLTKSPSLNAAKSELDKAIGRNCNGV 57
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.319 0.137 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,763,753
Number of Sequences: 62578
Number of extensions: 276235
Number of successful extensions: 1233
Number of sequences better than 100.0: 144
Number of HSP's better than 100.0 without gapping: 138
Number of HSP's successfully gapped in prelim test: 6
Number of HSP's that attempted gapping in prelim test: 1009
Number of HSP's gapped (non-prelim): 174
length of query: 217
length of database: 14,973,337
effective HSP length: 95
effective length of query: 122
effective length of database: 9,028,427
effective search space: 1101468094
effective search space used: 1101468094
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 49 (23.5 bits)