BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045959
(303 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255537321|ref|XP_002509727.1| conserved hypothetical protein [Ricinus communis]
gi|223549626|gb|EEF51114.1| conserved hypothetical protein [Ricinus communis]
Length = 297
Score = 451 bits (1161), Expect = e-124, Method: Compositional matrix adjust.
Identities = 222/304 (73%), Positives = 252/304 (82%), Gaps = 8/304 (2%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
MASGDLERG+ NRG ++ S+Y SD+QWTSWLIP FVVAN+AVFI MY+N
Sbjct: 1 MASGDLERGRV----TKNRGYNNNTSFYYVETSDKQWTSWLIPTFVVANIAVFIAVMYVN 56
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
NCPKNN CVA+FLGRLSF+PLKENPLFGPSSSTL+ +GALEW++VVH HQGWRLI
Sbjct: 57 NCPKNNLGFEGNCVAKFLGRLSFQPLKENPLFGPSSSTLENMGALEWNKVVHGHQGWRLI 116
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVSL 179
TC+WLHAGV+HLLANMLSL+FIGIRLEQQFGFVRVG +YLL+GFGG+ LF+ +S
Sbjct: 117 TCMWLHAGVVHLLANMLSLIFIGIRLEQQFGFVRVGLIYLLAGFGGSILSALFIQRNIS- 175
Query: 180 LVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQL 239
+ A+ALLTLV+IIAINLAVGILPHVDNFAHIGGF+ GF LGFV+LLRPQFGW E L
Sbjct: 176 --VGASALLTLVIIIAINLAVGILPHVDNFAHIGGFLTGFFLGFVILLRPQFGWYESRHL 233
Query: 240 PAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
PA ARVKSRH YQY ++A+VLL+ GFTVGLVMLFRG NGNDHCSWCHYLSCVPTSKW
Sbjct: 234 PADARVKSRHKAYQYAFLLIAVVLLVAGFTVGLVMLFRGVNGNDHCSWCHYLSCVPTSKW 293
Query: 300 KCGN 303
KC N
Sbjct: 294 KCDN 297
>gi|224074883|ref|XP_002304474.1| predicted protein [Populus trichocarpa]
gi|222841906|gb|EEE79453.1| predicted protein [Populus trichocarpa]
Length = 321
Score = 436 bits (1122), Expect = e-120, Method: Compositional matrix adjust.
Identities = 223/325 (68%), Positives = 253/325 (77%), Gaps = 30/325 (9%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
MASGDLERG NN N SY YVE +++QWTSW+IPMFVVAN+AVFIV MY+N
Sbjct: 1 MASGDLERGTKNRGNNANFPSY-----YVET-AEKQWTSWIIPMFVVANIAVFIVVMYVN 54
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
+CPK + CVA+FLGR SF+PLKENPLFGPS++TL+K+GALEW++VVH HQGWRLI
Sbjct: 55 DCPKKSLGIEGSCVAKFLGRFSFQPLKENPLFGPSAATLEKMGALEWNKVVHGHQGWRLI 114
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS- 178
TC+WLHAGV+H+LANMLSL+FIGIRLEQQFGFVRVG +YL+SGFGG+ LF+ +S
Sbjct: 115 TCMWLHAGVVHVLANMLSLIFIGIRLEQQFGFVRVGIIYLVSGFGGSILSSLFIQQNISV 174
Query: 179 -----LLVLLA-----------------AALLTLVVIIAINLAVGILPHVDNFAHIGGFM 216
L LL AALLTLVVIIAINLAVGILPHVDNFAHIGGFM
Sbjct: 175 GASGALFGLLGAMLSELLTNWTIYSNKIAALLTLVVIIAINLAVGILPHVDNFAHIGGFM 234
Query: 217 AGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
+GFLLGFV LLRPQFGWAE PA ARVKS+H YQYVL + A VLLIVGFT+ LVMLF
Sbjct: 235 SGFLLGFVFLLRPQFGWAENRHSPADARVKSKHKAYQYVLMLAAAVLLIVGFTLALVMLF 294
Query: 277 RGENGNDHCSWCHYLSCVPTSKWKC 301
+GENGNDHCSWCHYLSCVPTSKW C
Sbjct: 295 KGENGNDHCSWCHYLSCVPTSKWNC 319
>gi|224134785|ref|XP_002321905.1| predicted protein [Populus trichocarpa]
gi|222868901|gb|EEF06032.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 411 bits (1057), Expect = e-112, Method: Compositional matrix adjust.
Identities = 213/330 (64%), Positives = 250/330 (75%), Gaps = 27/330 (8%)
Query: 1 MASGDLERGKNISNNNNNRGSY--SSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMY 58
M+ D ERG + + NN SY S+ +Y +E TSWL+PMFVVANVAVFIV M
Sbjct: 1 MSREDTERGGGVKSRGNNSNSYLSSTSTYPIEDTEAHYRTSWLVPMFVVANVAVFIVVMC 60
Query: 59 INNCPKNNWEGGRG-CVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGW 117
INNCPK+ G CVARFLGR SFEPLK+NPLFGPSS+TL++LGALEW +VV +HQGW
Sbjct: 61 INNCPKHLHTRLEGKCVARFLGRFSFEPLKDNPLFGPSSATLERLGALEWTKVVDKHQGW 120
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL-LFLFNA 176
RLITCIWLHAG+IHLLANMLSLVFIGIRLEQQFGFVR+G VYLLSGFGG+ LF+ N
Sbjct: 121 RLITCIWLHAGIIHLLANMLSLVFIGIRLEQQFGFVRIGVVYLLSGFGGSVLSSLFIRNN 180
Query: 177 VS------LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIG 213
+S L LL AAALLTL+VII INLA+GILPHVDNFAHIG
Sbjct: 181 ISVGASGALFGLLGAMLSELITNWSIYTNKAAALLTLLVIIVINLAIGILPHVDNFAHIG 240
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
GF++GFLLGFVLL RPQ+GW ER +P+ VKS++ +QY L +++++LLIVGFTV LV
Sbjct: 241 GFLSGFLLGFVLLPRPQYGWLERRNVPSGVGVKSKYRAHQYALWLISVILLIVGFTVALV 300
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
MLF+GENGNDHC WCHYLSCVPTS+WKC +
Sbjct: 301 MLFKGENGNDHCHWCHYLSCVPTSRWKCND 330
>gi|224053955|ref|XP_002298056.1| predicted protein [Populus trichocarpa]
gi|222845314|gb|EEE82861.1| predicted protein [Populus trichocarpa]
Length = 322
Score = 410 bits (1054), Expect = e-112, Method: Compositional matrix adjust.
Identities = 222/328 (67%), Positives = 251/328 (76%), Gaps = 32/328 (9%)
Query: 1 MASGDLERGKNISNNNNNRGSYSS-GSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYI 59
M SGDLERG NRG+ S+ SYYVE +++QWTSWLIPMFVVAN+ VFIV MY+
Sbjct: 1 MTSGDLERG------TKNRGNSSNFPSYYVET-AEKQWTSWLIPMFVVANIVVFIVVMYV 53
Query: 60 NNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRL 119
N+CPK N R CVA+FLGR SF+PLKENPLFGPSS+TL+K+GALEW+++V QGWRL
Sbjct: 54 NDCPKKNLGSERSCVAKFLGRFSFQPLKENPLFGPSSATLEKMGALEWNKIVRGDQGWRL 113
Query: 120 ITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS 178
ITC+WLHAGVIH+LANMLSLVFIGIRLEQQFGFVRVG +YL+SGFGG+ + LF+ +S
Sbjct: 114 ITCMWLHAGVIHVLANMLSLVFIGIRLEQQFGFVRVGLIYLVSGFGGSIFSSLFIQRNIS 173
Query: 179 ------LLVLLA-----------------AALLTLVVIIAINLAVGILPHVDNFAHIGGF 215
L LL AALLTL+VIIAINLAVGILPHVDNFAHIGGF
Sbjct: 174 VGASGALFGLLGAMLSELLTNWTIYSNKIAALLTLMVIIAINLAVGILPHVDNFAHIGGF 233
Query: 216 MAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVML 275
GFLLGFVLLLRPQFGW E A A VKS+H YQY+ + A VLLIVGFT GLVML
Sbjct: 234 FTGFLLGFVLLLRPQFGWVESQHFRADAHVKSKHKAYQYMFLLAAAVLLIVGFTFGLVML 293
Query: 276 FRGENGNDHCSWCHYLSCVPTSKWKCGN 303
F+GENGNDHCSWCHYLSCVPTSKWKC N
Sbjct: 294 FKGENGNDHCSWCHYLSCVPTSKWKCEN 321
>gi|449452364|ref|XP_004143929.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449495860|ref|XP_004159966.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 327
Score = 405 bits (1041), Expect = e-110, Method: Compositional matrix adjust.
Identities = 205/328 (62%), Positives = 246/328 (75%), Gaps = 26/328 (7%)
Query: 1 MASGDLERGK-NISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYI 59
M++ DLERG N N +YS+ YY+E S++QWT WL+PMFVVAN+A+FIV MY+
Sbjct: 1 MSNQDLERGAAKNPPNTNPNANYSTSPYYLET-SEKQWTPWLVPMFVVANIAMFIVVMYV 59
Query: 60 NNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRL 119
NNCP +N G CVA FLGR SF+P++ENPL GPSS+TL KLGAL+W++VVHEHQGWRL
Sbjct: 60 NNCPDSNLGFGDKCVASFLGRFSFQPIRENPLLGPSSNTLVKLGALKWNKVVHEHQGWRL 119
Query: 120 ITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS 178
++CIWLHAG+IHLLANMLSLV IGIRLEQQFGFVR+G +YL++G GG+ LF+ N +S
Sbjct: 120 LSCIWLHAGIIHLLANMLSLVLIGIRLEQQFGFVRIGMIYLVAGVGGSVMSSLFIQNNIS 179
Query: 179 ------LLVLLA-----------------AALLTLVVIIAINLAVGILPHVDNFAHIGGF 215
L LL AAL TL+VI+ INLAVGILPHVDNFAHIGGF
Sbjct: 180 VGASGALFGLLGAMLSELLTNWTIYTNKVAALFTLIVIVVINLAVGILPHVDNFAHIGGF 239
Query: 216 MAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVML 275
+ GFLLGFVLL+RPQF W ERH LP AR ++ YQY+L + A +LL+ GFT+GLVML
Sbjct: 240 LTGFLLGFVLLVRPQFKWTERHHLPPGARRVPKYKTYQYILWLAAAILLVAGFTLGLVML 299
Query: 276 FRGENGNDHCSWCHYLSCVPTSKWKCGN 303
FRGENGN HCSWCHYLSCVPTS+W C N
Sbjct: 300 FRGENGNKHCSWCHYLSCVPTSRWDCAN 327
>gi|449494245|ref|XP_004159491.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 322
Score = 400 bits (1027), Expect = e-109, Method: Compositional matrix adjust.
Identities = 222/327 (67%), Positives = 250/327 (76%), Gaps = 29/327 (8%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
M S DLERG + NN G+YS+ SYY E S++QWTSWL+PMFVVANVA+FIV MY+N
Sbjct: 1 MGSRDLERGG--AKTNNPPGNYSN-SYYQET-SEKQWTSWLVPMFVVANVAMFIVVMYVN 56
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
NCPK++ G CVARFLGR SFEPL+ NPLFGPSSSTLQKLGALEW+++VH HQ WRLI
Sbjct: 57 NCPKHSL-GSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLI 115
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL-LFLFNAVS- 178
T IWLHAGVIHLLANMLSLVFIGIRLEQQFGF+RVG +YLLSG GG+ LF+ N +S
Sbjct: 116 TGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISV 175
Query: 179 -----LLVLLAAALLTLVVIIAI-----------------NLAVGILPHVDNFAHIGGFM 216
L LL A L L+ I NLAVGILPHVDNFAHIGGF+
Sbjct: 176 GASGALFGLLGAMLSELLTNWTIYTDKAAALITLIVIIVINLAVGILPHVDNFAHIGGFL 235
Query: 217 AGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
GFLLGF+LLLRPQFGW ER LPA +R +H YQY+LC VAL LLIVGFT+GLVMLF
Sbjct: 236 TGFLLGFILLLRPQFGWIERRHLPANSRAVPKHKLYQYILCFVALALLIVGFTIGLVMLF 295
Query: 277 RGENGNDHCSWCHYLSCVPTSKWKCGN 303
RGENGN+HCSWCHYLSCVPTSKW+CGN
Sbjct: 296 RGENGNNHCSWCHYLSCVPTSKWECGN 322
>gi|449460471|ref|XP_004147969.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 322
Score = 398 bits (1023), Expect = e-108, Method: Compositional matrix adjust.
Identities = 221/327 (67%), Positives = 249/327 (76%), Gaps = 29/327 (8%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
M S DLERG + N G+YS+ SYY E S++QWTSWL+PMFVVANVA+FIV MY+N
Sbjct: 1 MGSRDLERGG--AKTNKPPGNYSN-SYYQET-SEKQWTSWLVPMFVVANVAMFIVVMYVN 56
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
NCPK++ G CVARFLGR SFEPL+ NPLFGPSSSTLQKLGALEW+++VH HQ WRLI
Sbjct: 57 NCPKHSL-GSEECVARFLGRFSFEPLRVNPLFGPSSSTLQKLGALEWEKIVHGHQAWRLI 115
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL-LFLFNAVS- 178
T IWLHAGVIHLLANMLSLVFIGIRLEQQFGF+RVG +YLLSG GG+ LF+ N +S
Sbjct: 116 TGIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIRVGILYLLSGLGGSILSSLFIQNNISV 175
Query: 179 -----LLVLLAAALLTLVVIIAI-----------------NLAVGILPHVDNFAHIGGFM 216
L LL A L L+ I NLAVGILPHVDNFAHIGGF+
Sbjct: 176 GASGALFGLLGAMLSELLTNWTIYTDKAAALITLIVIIVINLAVGILPHVDNFAHIGGFL 235
Query: 217 AGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
GFLLGF+LLLRPQFGW ER LPA +R +H YQY+LC VAL LLIVGFT+GLVMLF
Sbjct: 236 TGFLLGFILLLRPQFGWIERRHLPANSRAVPKHKLYQYILCFVALALLIVGFTIGLVMLF 295
Query: 277 RGENGNDHCSWCHYLSCVPTSKWKCGN 303
RGENGN+HCSWCHYLSCVPTSKW+CGN
Sbjct: 296 RGENGNNHCSWCHYLSCVPTSKWECGN 322
>gi|255539517|ref|XP_002510823.1| KOM, putative [Ricinus communis]
gi|223549938|gb|EEF51425.1| KOM, putative [Ricinus communis]
Length = 325
Score = 394 bits (1011), Expect = e-107, Method: Compositional matrix adjust.
Identities = 206/328 (62%), Positives = 245/328 (74%), Gaps = 35/328 (10%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
MA D+ERG + +G +S S Y+ + QWTSWL+PMFVVANV+VFI+ MY+N
Sbjct: 1 MAGDDIERGDGV------KGYQTSSSSYLIEYKETQWTSWLVPMFVVANVSVFIIVMYMN 54
Query: 61 NCPKN---NWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGW 117
NCP + +EG CVARFLGR SFEPL++NPLFGPSS+TL K+GAL+W++VVH HQGW
Sbjct: 55 NCPDHFHPRFEGK--CVARFLGRFSFEPLRDNPLFGPSSATLTKMGALQWEKVVHGHQGW 112
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL-LFLFNA 176
RL+TCIWLHAG+IHLLANML LVFIG+RLEQQFGFVR+G +YL+SGF G+ LF+ N+
Sbjct: 113 RLVTCIWLHAGIIHLLANMLCLVFIGVRLEQQFGFVRIGIIYLVSGFAGSVLSSLFIRNS 172
Query: 177 VS-----------------------LLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIG 213
+S L AAALLTL+VIIAINLA+GILPHVDNFAHIG
Sbjct: 173 ISVGASGALFGLLGAMLSELITNWTLYTNKAAALLTLLVIIAINLAIGILPHVDNFAHIG 232
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
GF++GFLLGF+LL RPQFGW E +PA VKS++ YQYVL +VAL LLIVG V LV
Sbjct: 233 GFLSGFLLGFILLARPQFGWLESQNVPASVGVKSKYKGYQYVLWLVALALLIVGLVVALV 292
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKC 301
MLFRGENGND C WCHYLSCVPTS+WKC
Sbjct: 293 MLFRGENGNDRCHWCHYLSCVPTSRWKC 320
>gi|356575933|ref|XP_003556090.1| PREDICTED: inactive rhomboid protein 1-like isoform 1 [Glycine max]
Length = 329
Score = 389 bits (1000), Expect = e-106, Method: Compositional matrix adjust.
Identities = 197/324 (60%), Positives = 234/324 (72%), Gaps = 25/324 (7%)
Query: 5 DLERGKN-ISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCP 63
DLE G NN +YS+ S+ WTSWL+PMFVVAN+AVF++ MYINNCP
Sbjct: 4 DLESGGGGTKNNRTAEENYSAPESSHVYDSETHWTSWLVPMFVVANIAVFVITMYINNCP 63
Query: 64 KNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCI 123
+NN CVARFLGR SF+P++ENPL GPSSSTL K+GAL WD VV+ HQGWRL TCI
Sbjct: 64 RNNLRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRHQGWRLFTCI 123
Query: 124 WLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS---- 178
WLHAGVIHLLANMLSLVFIGIRLEQQFGF+++G +YL+SGFGG+ LF+ + +S
Sbjct: 124 WLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFIRDHISVGAS 183
Query: 179 --LLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGF 219
L LL A AL+TL+VII INL +GILPHVDNFAHIGGF+ GF
Sbjct: 184 GALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHVDNFAHIGGFLVGF 243
Query: 220 LLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGE 279
LLGF+LL RPQF W E+ +LPA +KS++ YQYVL IV+L+LLI G + LVMLFRGE
Sbjct: 244 LLGFILLPRPQFSWLEQRRLPAGVGMKSKYKAYQYVLWIVSLILLIAGLSTALVMLFRGE 303
Query: 280 NGNDHCSWCHYLSCVPTSKWKCGN 303
G DHC WC YL+CVPTSKW+C N
Sbjct: 304 KGYDHCHWCRYLTCVPTSKWECSN 327
>gi|225426828|ref|XP_002283259.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
gi|297742575|emb|CBI34724.3| unnamed protein product [Vitis vinifera]
Length = 328
Score = 386 bits (991), Expect = e-105, Method: Compositional matrix adjust.
Identities = 225/330 (68%), Positives = 251/330 (76%), Gaps = 29/330 (8%)
Query: 1 MASGDLERG---KNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAM 57
MA+ DLERG KN NN + G YSS +YY E S+ WTSWLIPMFVVANVAVF+V M
Sbjct: 1 MANEDLERGGGMKNRGNNGHPPGYYSS-TYYAE-ASETHWTSWLIPMFVVANVAVFVVVM 58
Query: 58 YINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGW 117
Y+N+CPK N CVA+FL RLSF+PL+ENPLFGPSSSTL+KLG LEW++VV+ QGW
Sbjct: 59 YVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFGPSSSTLEKLGGLEWNKVVYGDQGW 118
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAY--------- 168
RL+TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR+G +YL+SGFGG+
Sbjct: 119 RLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSILSSLFIQHN 178
Query: 169 ---------------YLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIG 213
L L S+ AAAL TLVVIIAINLAVGILPHVDNFAHIG
Sbjct: 179 ISVGASGALFGLLGAMLSELITNWSIYTNKAAALFTLVVIIAINLAVGILPHVDNFAHIG 238
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
GF+ GFLLGF+LLLRPQFGW +R PA ARVKS+H YQY +VA+ LLIVGFTVGLV
Sbjct: 239 GFLTGFLLGFMLLLRPQFGWVKRQHRPADARVKSKHKVYQYAFWLVAMALLIVGFTVGLV 298
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
MLFRGENGNDHCSWCHYLSCVPTSKWKC N
Sbjct: 299 MLFRGENGNDHCSWCHYLSCVPTSKWKCDN 328
>gi|359490352|ref|XP_003634078.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 324
Score = 382 bits (981), Expect = e-103, Method: Compositional matrix adjust.
Identities = 212/326 (65%), Positives = 244/326 (74%), Gaps = 32/326 (9%)
Query: 1 MASGDLE-RGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYI 59
MA DLE RG N GSY+S S V S+ QWTSWL+PMFVVANVAVF+VAMYI
Sbjct: 1 MAGEDLESRGAK-----NRGGSYTSSS--VIEDSETQWTSWLVPMFVVANVAVFVVAMYI 53
Query: 60 NNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRL 119
NNCPK N CVA FLGR SF+PLKENPLFGPSS TL+KLGALEW +VV +HQGWRL
Sbjct: 54 NNCPKENSRVQGKCVAGFLGRFSFQPLKENPLFGPSSKTLEKLGALEWKKVVSKHQGWRL 113
Query: 120 ITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS 178
+TCIWLHAG+IHLL NMLSLV IGIRLEQQFGFVR+G +YLLSGFGG+ LF+ N++S
Sbjct: 114 VTCIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRIGVIYLLSGFGGSVLSSLFIQNSIS 173
Query: 179 ------LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGF 215
L LL AAALLTL+VI+A+NL VGILP V+NFAHIGGF
Sbjct: 174 VGASGALFGLLGAMLSELITNWSMYTNRAAALLTLLVIVAVNLTVGILPRVNNFAHIGGF 233
Query: 216 MAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVML 275
+ GF LGF+L+ RPQFGW E LPA RVKS++ YQYV +V+LVLLI GFTVGLVML
Sbjct: 234 VTGFFLGFILMPRPQFGWIEGRNLPADVRVKSKYKAYQYVCWLVSLVLLIAGFTVGLVML 293
Query: 276 FRGENGNDHCSWCHYLSCVPTSKWKC 301
++G+NG++HC WCHYLSCVPTS WKC
Sbjct: 294 YKGKNGSEHCHWCHYLSCVPTSSWKC 319
>gi|225455416|ref|XP_002279077.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Vitis vinifera]
gi|297741091|emb|CBI31822.3| unnamed protein product [Vitis vinifera]
Length = 325
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 211/324 (65%), Positives = 243/324 (75%), Gaps = 32/324 (9%)
Query: 3 SGDLE-RGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINN 61
S DLE RG N GSY+S S V S+ QWTSWL+PMFVVANVAVF+VAMYINN
Sbjct: 4 SEDLESRGAK-----NRGGSYTSSS--VIEDSETQWTSWLVPMFVVANVAVFVVAMYINN 56
Query: 62 CPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLIT 121
CPK N CVA FLGR SF+PLKENPLFGPSS TL+KLGALEW +VV +HQGWRL+T
Sbjct: 57 CPKENSRVQGKCVAGFLGRFSFQPLKENPLFGPSSKTLEKLGALEWKKVVSKHQGWRLVT 116
Query: 122 CIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS-- 178
CIWLHAG+IHLL NMLSLV IGIRLEQQFGFVR+G +YLLSGFGG+ LF+ N++S
Sbjct: 117 CIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRIGVIYLLSGFGGSVLSSLFIQNSISVG 176
Query: 179 ----LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMA 217
L LL AAALLTL+VI+A+NL VGILP V+NFAHIGGF+
Sbjct: 177 ASGALFGLLGAMLSELITNWSMYTNRAAALLTLLVIVAVNLTVGILPRVNNFAHIGGFVT 236
Query: 218 GFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFR 277
GF LGF+L+ RPQFGW E LPA RVKS++ YQYV +V+LVLLI GFTVGLVML++
Sbjct: 237 GFFLGFILMPRPQFGWIEGRNLPADVRVKSKYKAYQYVCWLVSLVLLIAGFTVGLVMLYK 296
Query: 278 GENGNDHCSWCHYLSCVPTSKWKC 301
G+NG++HC WCHYLSCVPTS WKC
Sbjct: 297 GKNGSEHCHWCHYLSCVPTSSWKC 320
>gi|356534153|ref|XP_003535622.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 369
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 197/327 (60%), Positives = 240/327 (73%), Gaps = 25/327 (7%)
Query: 1 MASGDLERGKNISNNNNN-RGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYI 59
MA DLE G ++ NN + +YS+ S+ WTSWL+PMFVVAN+AVF++ MYI
Sbjct: 1 MARRDLESGGGVTKNNRSAEENYSAPESSHVYDSETHWTSWLVPMFVVANIAVFVITMYI 60
Query: 60 NNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRL 119
NNCP+NN CVARFLGR SF+P++ENPL GPSSSTL K+GAL WD VV+ HQGWRL
Sbjct: 61 NNCPRNNIRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRHQGWRL 120
Query: 120 ITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS 178
+TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF+++G +YL+SGFGG+ LF+ + +S
Sbjct: 121 VTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFIRDHIS 180
Query: 179 ------LLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIGGF 215
L LL A AL+TL+VII INL +GILPHVDNFAHIGGF
Sbjct: 181 VGASGALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHVDNFAHIGGF 240
Query: 216 MAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVML 275
+ G LLGF+LL RPQFGW E+ +LPA ++KS++ +QYVL +V+L+LLI G + LVML
Sbjct: 241 LVGLLLGFILLPRPQFGWLEQRRLPAGVQMKSKYKTHQYVLGVVSLILLIAGLSTALVML 300
Query: 276 FRGENGNDHCSWCHYLSCVPTSKWKCG 302
FRGE G DHC WC YL+CVPTSKW CG
Sbjct: 301 FRGEKGYDHCHWCRYLTCVPTSKWDCG 327
>gi|115480259|ref|NP_001063723.1| Os09g0525900 [Oryza sativa Japonica Group]
gi|52076044|dbj|BAD46497.1| putative membrane protein [Oryza sativa Japonica Group]
gi|52077312|dbj|BAD46353.1| putative membrane protein [Oryza sativa Japonica Group]
gi|113631956|dbj|BAF25637.1| Os09g0525900 [Oryza sativa Japonica Group]
gi|125564435|gb|EAZ09815.1| hypothetical protein OsI_32104 [Oryza sativa Indica Group]
gi|125606379|gb|EAZ45415.1| hypothetical protein OsJ_30065 [Oryza sativa Japonica Group]
gi|215700990|dbj|BAG92414.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765558|dbj|BAG87255.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 323
Score = 368 bits (945), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 187/294 (63%), Positives = 225/294 (76%), Gaps = 27/294 (9%)
Query: 33 SDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLF 92
D++W WL+P +VA +AVFIV MY+NNCPK+ G GCVA FL R SF+PL+ENPL
Sbjct: 30 DDRKWWPWLVPTVIVACIAVFIVEMYVNNCPKHGSALG-GCVAGFLRRFSFQPLRENPLL 88
Query: 93 GPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 152
GPSS+TLQK+GAL+W++VVH+HQGWRLI+CIWLHAG+IHL+ NMLSL+FIGIRLEQQFGF
Sbjct: 89 GPSSATLQKMGALDWNKVVHQHQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGF 148
Query: 153 VRVGFVYLLSGFGGAYY-LLFLFN-----------------AVSLLVL-------LAAAL 187
VR+G +YLLSGFGG+ LFL N +S L++ AAA+
Sbjct: 149 VRIGAIYLLSGFGGSVLSALFLRNNYISVGASGALFGLLGSMLSELIMNWTIYSNKAAAI 208
Query: 188 LTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKS 247
+TL+ IIAINLA+GILPH DNFAHIGGF+ GFLLGFVLL RPQFGW ERH+LP Q
Sbjct: 209 ITLLFIIAINLAIGILPHADNFAHIGGFVTGFLLGFVLLARPQFGWMERHELP-QTNQPP 267
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ YQYVL +VA VLL+VGF V LVMLF+G+NGND C WCHYL+CVPTSKWKC
Sbjct: 268 KYKAYQYVLWVVAFVLLLVGFVVSLVMLFKGKNGNDGCHWCHYLNCVPTSKWKC 321
>gi|449446051|ref|XP_004140785.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449485528|ref|XP_004157199.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 323
Score = 367 bits (943), Expect = 3e-99, Method: Compositional matrix adjust.
Identities = 191/322 (59%), Positives = 230/322 (71%), Gaps = 26/322 (8%)
Query: 6 LERGKNISNNNNNRGSYSSGSY-YVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
+ R S NRGS S S Y+ ++ QWTSWL+PMFVVAN+AVFIV MYINNCPK
Sbjct: 1 MNRQDIESREVKNRGSSSLSSSSYLIEDTETQWTSWLVPMFVVANIAVFIVVMYINNCPK 60
Query: 65 NNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIW 124
+N E CVARFL R SF+PL+ENPLFGPS++TL+K+GALE +VV++HQ WRLITCIW
Sbjct: 61 HNDEFEGKCVARFLERFSFQPLRENPLFGPSATTLEKMGALESTKVVNKHQAWRLITCIW 120
Query: 125 LHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAY---------------- 168
LHAGV HLLANML LVFIG RLEQQFGFVR+G +YL+SGFGG+
Sbjct: 121 LHAGVFHLLANMLCLVFIGTRLEQQFGFVRIGVIYLVSGFGGSVLSSLLIQNNISVGASG 180
Query: 169 --------YLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFL 220
L LF ++ AAAL TL+VII IN +G+LPHV+NFAHIGGF+ GFL
Sbjct: 181 SLFGLLGAMLSELFTNWTIYTNKAAALATLLVIIFINFGIGLLPHVNNFAHIGGFLTGFL 240
Query: 221 LGFVLLLRPQFGWAERHQLPA-QARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGE 279
LGF LL RP++GW E+ LP A + S++ YQYVL IV++VLLI GFT+ LVMLFR E
Sbjct: 241 LGFALLPRPKYGWLEQRNLPGVGAGLSSKYKTYQYVLWIVSVVLLIAGFTIALVMLFREE 300
Query: 280 NGNDHCSWCHYLSCVPTSKWKC 301
N ND C WCHYL+CVPTS+W+C
Sbjct: 301 NANDRCHWCHYLNCVPTSRWQC 322
>gi|110430670|gb|ABG73460.1| membrane protein [Oryza brachyantha]
Length = 326
Score = 366 bits (940), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 193/326 (59%), Positives = 234/326 (71%), Gaps = 27/326 (8%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
MAS E+ + + G G E +++W WL+P +VA +AVFIV MY+N
Sbjct: 1 MASNGEEKSRVAAAGYGGGGGGGYGYGAYEGRDERKWWPWLVPTVIVACIAVFIVEMYVN 60
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
NCPK+ G GCVA FL R SF+PL+ENPL GPSS TLQK+GAL+W++VVH+HQGWRLI
Sbjct: 61 NCPKHGSALG-GCVAGFLRRFSFQPLRENPLLGPSSPTLQKMGALDWNKVVHQHQGWRLI 119
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFN---- 175
+CIWLHAG+IHL+ NMLSL+FIGIRLEQQFGFVR+G +YLLSGFGG+ LFL N
Sbjct: 120 SCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLLSGFGGSVLSALFLRNNYIS 179
Query: 176 -------------AVSLLVL-------LAAALLTLVVIIAINLAVGILPHVDNFAHIGGF 215
+S L++ AAA++TL+ IIAINLA+GILPH DNFAHIGGF
Sbjct: 180 VGASGALFGLLGSMLSELIMNWTIYSNKAAAIITLLFIIAINLAIGILPHADNFAHIGGF 239
Query: 216 MAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVML 275
+ GFLLGFVLL RPQFGW ERH+LP Q ++ YQYVL +VA VLL+VGF V LVML
Sbjct: 240 VTGFLLGFVLLARPQFGWMERHELP-QTNQPPKYKAYQYVLWVVAFVLLLVGFVVSLVML 298
Query: 276 FRGENGNDHCSWCHYLSCVPTSKWKC 301
F+G+NGND C WCHYL+CVPTSKWKC
Sbjct: 299 FKGKNGNDGCHWCHYLNCVPTSKWKC 324
>gi|224122384|ref|XP_002318821.1| predicted protein [Populus trichocarpa]
gi|222859494|gb|EEE97041.1| predicted protein [Populus trichocarpa]
Length = 298
Score = 366 bits (939), Expect = 7e-99, Method: Compositional matrix adjust.
Identities = 197/299 (65%), Positives = 227/299 (75%), Gaps = 29/299 (9%)
Query: 30 EPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKN---NWEGGRGCVARFLGRLSFEPL 86
E WTSWL+PMFVVA+V VFIV MYINNCPK+ +EG C ARFLGR SFEPL
Sbjct: 1 EDAEAHYWTSWLVPMFVVAHVVVFIVVMYINNCPKHLHTRFEGK--CAARFLGRFSFEPL 58
Query: 87 KENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
K+NPLFGPSS+TL++ GALEW +VVH+HQGWRLI+CIWLHAG+IHLLANMLSLVFIGIRL
Sbjct: 59 KDNPLFGPSSATLERFGALEWTKVVHKHQGWRLISCIWLHAGIIHLLANMLSLVFIGIRL 118
Query: 147 EQQFGFVRVGFVYLLSGFGGAYYL-LFLFNAVS------LLVLL---------------- 183
EQQFGFVR+G VYLLSGFGG+ LF+ N++S L LL
Sbjct: 119 EQQFGFVRIGIVYLLSGFGGSVLSSLFIRNSISVGASGALFGLLGAMLSELITNWSIYTN 178
Query: 184 -AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQ 242
AAL TL+VI AINLA+GILP VDNFAHIGGF++GFLLGFVLL R Q+GW R LP+
Sbjct: 179 KTAALFTLLVITAINLAIGILPRVDNFAHIGGFLSGFLLGFVLLPRSQYGWQGRRNLPSG 238
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
KS+ YQY L +V++ LLIVGFTV LVMLF+G+NGNDHC WCHYLSCVPTS+WKC
Sbjct: 239 VGFKSKLKAYQYALWLVSVALLIVGFTVALVMLFKGKNGNDHCHWCHYLSCVPTSRWKC 297
>gi|297810841|ref|XP_002873304.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297319141|gb|EFH49563.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 346
Score = 362 bits (928), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 188/310 (60%), Positives = 231/310 (74%), Gaps = 28/310 (9%)
Query: 21 SYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGR---GCVARF 77
+ SS + + + +WTSWL+PMFVVANVA+F+VAM++NNCPK+ +E R CVARF
Sbjct: 37 ALSSSTEFGDNALSSRWTSWLVPMFVVANVAIFVVAMFVNNCPKH-FESHRLRGNCVARF 95
Query: 78 LGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANML 137
LGRLSFEPL+ NPLFGPSS TL+KLGALEW +VV + +GWRL+TCIWLHAGVIHL ANML
Sbjct: 96 LGRLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANML 155
Query: 138 SLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL-LFLFNAVS------LLVLLA------ 184
SL+FIGIRLEQQFGFVR+G +YLLSG GG+ LF+ N++S L LL
Sbjct: 156 SLIFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSEL 215
Query: 185 -----------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW 233
AALLTL+ +I INLA+GILPHVDNFAH+GGF+ GFLLGF+LL RPQF W
Sbjct: 216 FTNWTIYSNKIAALLTLLFVILINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKW 275
Query: 234 AERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSC 293
R +P ++ ++ PYQY+L +++LVLLI GF V L+MLFRGENGNDHC WC YL C
Sbjct: 276 LARVHMPQGTPLRYKYKPYQYLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCRYLRC 335
Query: 294 VPTSKWKCGN 303
VPTS W+C +
Sbjct: 336 VPTSSWRCDD 345
>gi|326514946|dbj|BAJ99834.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 321
Score = 360 bits (923), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 180/297 (60%), Positives = 224/297 (75%), Gaps = 26/297 (8%)
Query: 30 EPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKEN 89
E D++W WL+P +VA VAVF+V M++N+CP++ G GCVA FL R SF+PL+EN
Sbjct: 24 ESAGDRKWWPWLVPTVIVACVAVFVVEMWVNDCPRHGSALGGGCVAGFLRRFSFQPLREN 83
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
PL GPSS+TL K+GAL+W++VVH+HQGWRLI+CIWLHAG+IHL+ +MLSL+FIGIRLEQQ
Sbjct: 84 PLLGPSSTTLGKMGALDWNKVVHQHQGWRLISCIWLHAGLIHLVVDMLSLLFIGIRLEQQ 143
Query: 150 FGFVRVGFVYLLSGFGGAYY-LLFLFN-------AVSLLVLLA----------------- 184
FGFVR+G +YLLSGFGG+ LFL N + +L LL
Sbjct: 144 FGFVRIGAIYLLSGFGGSVMSALFLRNNYISVGASGALFGLLGSMLSELLMNWTIYSNKV 203
Query: 185 AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
AA++TL+ IIAIN+A+GILPH DNFAHIGGF+ GFLLGFVLL RPQFGW ER +LP
Sbjct: 204 AAIITLLFIIAINVAIGILPHADNFAHIGGFLTGFLLGFVLLARPQFGWLERSELP-HTN 262
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ PYQYVL +VA VLL+VGFT+ LVMLF+G+NGND C WCHYL+CVPTS+WKC
Sbjct: 263 QPPKYKPYQYVLWVVAFVLLLVGFTISLVMLFKGKNGNDGCHWCHYLNCVPTSRWKC 319
>gi|297837099|ref|XP_002886431.1| hypothetical protein ARALYDRAFT_893154 [Arabidopsis lyrata subsp.
lyrata]
gi|297332272|gb|EFH62690.1| hypothetical protein ARALYDRAFT_893154 [Arabidopsis lyrata subsp.
lyrata]
Length = 317
Score = 358 bits (920), Expect = 1e-96, Method: Compositional matrix adjust.
Identities = 194/325 (59%), Positives = 235/325 (72%), Gaps = 32/325 (9%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
MA+ D+ERG NRG+ +S +Y E + WTSWLIP VVAN+AVFI M++N
Sbjct: 1 MANRDVERG-----GKKNRGA-NSNYFYDESSGETHWTSWLIPAIVVANLAVFIAVMFVN 54
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
+CPK + CVARFLGR SF+PLKENPLFGPSSSTL+K+GALEW +VVHEHQGWRL+
Sbjct: 55 DCPKKITGANKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRLL 114
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS- 178
+C+WLHAG+IHLL NMLSL+FIGIRLEQQFGF+RVG +YL+SG GG+ LFL ++S
Sbjct: 115 SCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESISV 174
Query: 179 -----LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFM 216
L LL AAAL+TL+ IIAINLA+G+LP VDNFAHIGGF+
Sbjct: 175 GASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVDNFAHIGGFL 234
Query: 217 AGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
GF LGFVLL+RPQ+GW +R K +++ YQY L +VA+VLL+VG TV VMLF
Sbjct: 235 TGFCLGFVLLVRPQYGWEASRT--NTSRTKRKYSMYQYALFVVAVVLLVVGLTVASVMLF 292
Query: 277 RGENGNDHCSWCHYLSCVPTSKWKC 301
+GENGN HC WCHYLSC PTSKW C
Sbjct: 293 KGENGNKHCKWCHYLSCFPTSKWTC 317
>gi|356559853|ref|XP_003548211.1| PREDICTED: inactive rhomboid protein 1-like isoform 1 [Glycine max]
Length = 329
Score = 358 bits (919), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 202/323 (62%), Positives = 238/323 (73%), Gaps = 26/323 (8%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
DLE G N NN S + SY +P + WTSWL+P+FV NV VF+VAMY+N+CP+
Sbjct: 8 DLESGGANKNYNNISYSAAPTSYVYDP--EVHWTSWLVPLFVAVNVVVFVVAMYLNDCPR 65
Query: 65 NNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIW 124
N CVARFLGR SF+PL+ENPLFGPSSSTL K+GAL WD VV+ HQ WRL+TCIW
Sbjct: 66 KNLGFEGECVARFLGRFSFQPLRENPLFGPSSSTLTKMGALRWDDVVNHHQAWRLVTCIW 125
Query: 125 LHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS----- 178
LHAGV+HL ANMLSLVFIGIRLEQQFGFVR+G +YLLSGFGG+ LF+ N +S
Sbjct: 126 LHAGVVHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNNISVGASG 185
Query: 179 -LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFL 220
L LL AAAL TL+ II INLA+G+LPHVDNFAHIGGF+ GFL
Sbjct: 186 ALFGLLGAMLSELITNWSIYTNKAAALFTLLFIIVINLAIGMLPHVDNFAHIGGFLTGFL 245
Query: 221 LGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGEN 280
LGF+LLLRPQFGW E+ + PA R+KS++ YQYVL IV+ +LLIVG ++ LVMLFRGEN
Sbjct: 246 LGFILLLRPQFGWLEQRRPPAGVRLKSKYKAYQYVLWIVSAILLIVGLSIALVMLFRGEN 305
Query: 281 GNDHCSWCHYLSCVPTSKWKCGN 303
G DHC WCHYL+CVPTSKWKC +
Sbjct: 306 GYDHCHWCHYLTCVPTSKWKCND 328
>gi|414867422|tpg|DAA45979.1| TPA: membrane protein [Zea mays]
Length = 334
Score = 358 bits (918), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 185/329 (56%), Positives = 228/329 (69%), Gaps = 31/329 (9%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
D+E+G +N + G Y + +++W WL+P+ V N+ +F VAMY+NNCP
Sbjct: 7 DVEKGGR-NNGDGKPSPPPPGHLYPQRDGEREWVPWLVPLVVAVNIVLFAVAMYVNNCPA 65
Query: 65 NNWEGGRG----CVAR-FLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRL 119
+ RG CVAR FL R SF+PL ENPL GPSS+TLQKLGAL WD+VV EHQGWRL
Sbjct: 66 HAASSRRGGAGSCVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVWDKVVREHQGWRL 125
Query: 120 ITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS 178
+TCIWLHAGV HLLANM+SLV IG+RLEQQFG+VRVG +YL+SG GG+ LF+ N +S
Sbjct: 126 VTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGIIYLVSGVGGSVLSSLFIRNNIS 185
Query: 179 ------LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGF 215
L LL AAAL+TL+V+IAINLA+GILPHVDNFAHIGGF
Sbjct: 186 VGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVIAINLAIGILPHVDNFAHIGGF 245
Query: 216 MAGFLLGFVLLLRPQFGWAERHQLPAQAR-VKSRHNPYQYVLCIVALVLLIVGFTVGLVM 274
+ GFLLGFVLL+RP +GW +R+ LP+ + ++ YQ+ L VA VL ++GF VGL M
Sbjct: 246 LTGFLLGFVLLMRPHYGWMQRYALPSDVKYTTKKYLAYQWALLAVASVLAVIGFAVGLGM 305
Query: 275 LFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
LFRG N NDHC WCHYLSCVPTS+W CG
Sbjct: 306 LFRGVNANDHCGWCHYLSCVPTSRWSCGK 334
>gi|195652545|gb|ACG45740.1| membrane protein [Zea mays]
Length = 334
Score = 357 bits (917), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 185/329 (56%), Positives = 228/329 (69%), Gaps = 31/329 (9%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
D+E+G +N + G Y + +++W WL+P+ V N+ +F VAMY+NNCP
Sbjct: 7 DVEKGGR-NNGDGKPSPPPPGHLYPQRDGEREWLPWLVPLVVAVNIVLFAVAMYVNNCPA 65
Query: 65 NNWEGGRG----CVAR-FLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRL 119
+ RG CVAR FL R SF+PL ENPL GPSS+TLQKLGAL WD+VV EHQGWRL
Sbjct: 66 HAASSRRGGAGSCVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVWDKVVREHQGWRL 125
Query: 120 ITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS 178
+TCIWLHAGV HLLANM+SLV IG+RLEQQFG+VRVG +YL+SG GG+ LF+ N +S
Sbjct: 126 VTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGIIYLVSGVGGSVLSSLFIRNNIS 185
Query: 179 ------LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGF 215
L LL AAAL+TL+V+IAINLA+GILPHVDNFAHIGGF
Sbjct: 186 VGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVIAINLAIGILPHVDNFAHIGGF 245
Query: 216 MAGFLLGFVLLLRPQFGWAERHQLPAQAR-VKSRHNPYQYVLCIVALVLLIVGFTVGLVM 274
+ GFLLGFVLL+RP +GW +R+ LP+ + ++ YQ+ L VA VL ++GF VGL M
Sbjct: 246 LTGFLLGFVLLMRPHYGWMQRYALPSDVKYTTKKYLAYQWALLAVASVLAVIGFAVGLGM 305
Query: 275 LFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
LFRG N NDHC WCHYLSCVPTS+W CG
Sbjct: 306 LFRGVNANDHCGWCHYLSCVPTSRWSCGK 334
>gi|115450317|ref|NP_001048759.1| Os03g0116400 [Oryza sativa Japonica Group]
gi|108705857|gb|ABF93652.1| membrane protein, putative, expressed [Oryza sativa Japonica Group]
gi|113547230|dbj|BAF10673.1| Os03g0116400 [Oryza sativa Japonica Group]
gi|125542142|gb|EAY88281.1| hypothetical protein OsI_09736 [Oryza sativa Indica Group]
gi|125584694|gb|EAZ25358.1| hypothetical protein OsJ_09173 [Oryza sativa Japonica Group]
gi|215692511|dbj|BAG87931.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 325
Score = 355 bits (910), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 180/327 (55%), Positives = 229/327 (70%), Gaps = 30/327 (9%)
Query: 2 ASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINN 61
+ D+E+G G S Y G +++W W++P F+VAN+ VF++ MY NN
Sbjct: 4 SHADVEKGAR----RKEVGKVPSPLYPQHEG-EREWVPWIVPSFLVANIVVFVLTMYANN 58
Query: 62 CPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLIT 121
CP + C+ARFLGR SF+PL ENPL GPSS+TLQK+GAL WD+VVHEHQG+RLIT
Sbjct: 59 CPLHTPPRSGKCIARFLGRFSFQPLHENPLLGPSSATLQKMGALVWDKVVHEHQGYRLIT 118
Query: 122 CIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS-- 178
IWLHAGV+HL+ANMLSL+FIG+RLEQQFG+VR+G +YLLSG GG+ LF+ N +S
Sbjct: 119 SIWLHAGVLHLVANMLSLIFIGLRLEQQFGYVRIGAIYLLSGLGGSVLSSLFIRNHISVG 178
Query: 179 ----LLVLLA-----------------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMA 217
L LL AA++TL+ +IA+NLA+GILPHV+NFAHIGGF+
Sbjct: 179 ASGALFGLLGAMLSELLTNWTIYTNKVAAVITLLFVIAVNLALGILPHVNNFAHIGGFLT 238
Query: 218 GFLLGFVLLLRPQFGWAERHQLPAQARVKS-RHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
GFLLGFVLL+RP FGW ER+ LP+ + S ++ YQ++L +A L+IVGF VG+ MLF
Sbjct: 239 GFLLGFVLLMRPHFGWMERYSLPSGSPCSSKKYLVYQWILLAIATALVIVGFAVGMTMLF 298
Query: 277 RGENGNDHCSWCHYLSCVPTSKWKCGN 303
RGEN ND C WCHYLSCVPTS+W C N
Sbjct: 299 RGENANDSCHWCHYLSCVPTSRWTCSN 325
>gi|194688302|gb|ACF78235.1| unknown [Zea mays]
Length = 336
Score = 354 bits (908), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 184/330 (55%), Positives = 230/330 (69%), Gaps = 31/330 (9%)
Query: 5 DLERG-KNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCP 63
D+E+G +N + + G Y + +++W WL+P+ V N+ +F VAMY+NNCP
Sbjct: 7 DVEKGGRNNGDGKPSPPPPPPGHLYPQRDGEREWVPWLVPLVVAVNIVLFAVAMYVNNCP 66
Query: 64 K---NNWEGGRG-CVAR-FLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWR 118
++ GG G CVAR FL R SF+PL ENPL GPSS+TLQKLGAL WD+VV EHQGWR
Sbjct: 67 AHAASSRHGGAGSCVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVWDKVVREHQGWR 126
Query: 119 LITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAV 177
L+TCIWLHAGV HLLANM+SLV IG+RLEQQFG+VRVG +YL+SG GG+ LF+ N +
Sbjct: 127 LVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGIIYLVSGVGGSVLSSLFIRNNI 186
Query: 178 S------LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGG 214
S L LL AAAL+TL+V+IAINLA+GILPHVDNFAHIGG
Sbjct: 187 SVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVIAINLAIGILPHVDNFAHIGG 246
Query: 215 FMAGFLLGFVLLLRPQFGWAERHQLPAQAR-VKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
F+ GFLLGFV L+RP +GW +R+ LP+ + ++ YQ+ L VA VL ++GF +GL
Sbjct: 247 FLTGFLLGFVFLMRPHYGWMQRYALPSDVKYTTKKYLVYQWALLAVASVLAVIGFAIGLG 306
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
MLFRG N NDHC WCHYLSCVPTS+W CG
Sbjct: 307 MLFRGVNANDHCGWCHYLSCVPTSRWSCGK 336
>gi|15221690|ref|NP_176500.1| rhomboid -like 2 [Arabidopsis thaliana]
gi|12323258|gb|AAG51610.1|AC010795_14 membrane protein, putative; 61952-60281 [Arabidopsis thaliana]
gi|28393358|gb|AAO42103.1| putative membrane protein [Arabidopsis thaliana]
gi|28827620|gb|AAO50654.1| putative membrane protein [Arabidopsis thaliana]
gi|77999980|dbj|BAE46871.1| Rhomboid family protein AtRBL2 [Arabidopsis thaliana]
gi|332195937|gb|AEE34058.1| rhomboid -like 2 [Arabidopsis thaliana]
Length = 317
Score = 353 bits (907), Expect = 5e-95, Method: Compositional matrix adjust.
Identities = 195/326 (59%), Positives = 235/326 (72%), Gaps = 34/326 (10%)
Query: 1 MASGDLER-GKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYI 59
MA+ D+ER GK NNN +Y E + WTSWLIP VVAN+AVFI M++
Sbjct: 1 MANRDVERVGKKNRGANNNY-------FYEESSGETHWTSWLIPAIVVANLAVFIAVMFV 53
Query: 60 NNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRL 119
N+CPK + CVARFLGR SF+PLKENPLFGPSSSTL+K+GALEW +VVHEHQGWRL
Sbjct: 54 NDCPKKITGPNKECVARFLGRFSFQPLKENPLFGPSSSTLEKMGALEWRKVVHEHQGWRL 113
Query: 120 ITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS 178
++C+WLHAG+IHLL NMLSL+FIGIRLEQQFGF+RVG +YL+SG GG+ LFL ++S
Sbjct: 114 LSCMWLHAGIIHLLTNMLSLIFIGIRLEQQFGFIRVGLIYLISGLGGSILSSLFLQESIS 173
Query: 179 ------LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGF 215
L LL AAAL+TL+ IIAINLA+G+LP VDNFAHIGGF
Sbjct: 174 VGASGALFGLLGAMLSELLTNWTIYANKAAALITLLFIIAINLALGMLPRVDNFAHIGGF 233
Query: 216 MAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVML 275
+ GF LGFVLL+RPQ+GW +R K +++ YQYVL +V++VLL+VG TV LVML
Sbjct: 234 LTGFCLGFVLLVRPQYGWEASRT--NTSRTKRKYSMYQYVLFVVSVVLLVVGLTVALVML 291
Query: 276 FRGENGNDHCSWCHYLSCVPTSKWKC 301
F+GENGN HC WCHYLSC PTSKW C
Sbjct: 292 FKGENGNKHCKWCHYLSCFPTSKWTC 317
>gi|217072548|gb|ACJ84634.1| unknown [Medicago truncatula]
gi|388512075|gb|AFK44099.1| unknown [Medicago truncatula]
Length = 326
Score = 352 bits (903), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 195/327 (59%), Positives = 235/327 (71%), Gaps = 26/327 (7%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
M+ DLER NNNN+ + S +P + WTSWL+PMFVVAN+ VF+VAMYIN
Sbjct: 1 MSGRDLERDGGNKNNNNHAYAVPPTSSGYDP--ETSWTSWLVPMFVVANLVVFVVAMYIN 58
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
NCP N CV +FLGR SF+PLKENPL GPSS TL K+GAL+WD VV+ HQGWRL+
Sbjct: 59 NCPSKNLGFDGACVLKFLGRFSFQPLKENPLLGPSSETLTKMGALKWDAVVNHHQGWRLV 118
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS- 178
+CIWLHAG+IHL ANM+SLVFIGIRLEQQFGFVR+G VYL+SGFGG+ LF+ ++S
Sbjct: 119 SCIWLHAGIIHLAANMISLVFIGIRLEQQFGFVRIGIVYLVSGFGGSILSALFIRKSISV 178
Query: 179 -----LLVLLA-----------------AALLTLVVIIAINLAVGILPHVDNFAHIGGFM 216
L LL AAL+TL+ II INL +G+LPHVDNFAHIGGF+
Sbjct: 179 GASGALFGLLGAMLSELITNWSIYTNKVAALMTLLFIIVINLVIGMLPHVDNFAHIGGFL 238
Query: 217 AGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
GFLLGF+ L RPQFGW + +PA R+KS++ YQYVL +V+LVLLI G +GLVML
Sbjct: 239 TGFLLGFIFLPRPQFGWLAQRHVPAGVRLKSKYKVYQYVLWVVSLVLLIAGLCIGLVMLL 298
Query: 277 RGENGNDHCSWCHYLSCVPTSKWKCGN 303
RGE+G DHC WCHYL+CVPTSKWKC +
Sbjct: 299 RGESGYDHCHWCHYLTCVPTSKWKCDD 325
>gi|125532680|gb|EAY79245.1| hypothetical protein OsI_34361 [Oryza sativa Indica Group]
Length = 332
Score = 352 bits (902), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 183/325 (56%), Positives = 234/325 (72%), Gaps = 27/325 (8%)
Query: 5 DLERGKNISNNNNNR-GSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCP 63
D+E+G R GS ++ + Y + +++W WL+P +VANV VF VAMY+NNCP
Sbjct: 9 DVEKGGRKREGEEERCGSPAAVAQYPQREGEREWVPWLVPAILVANVVVFAVAMYVNNCP 68
Query: 64 KNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCI 123
+ GG CVA FL R SF+PL ENPL GPSS+TLQK+GAL WD+VVHEHQGWRL+TCI
Sbjct: 69 SHASRGG-ACVAGFLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCI 127
Query: 124 WLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS---- 178
WLHAGV+HLLANMLSLV IG+RLEQQFG++R+G +YL+SG GG+ LF+ N++S
Sbjct: 128 WLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLVSGIGGSVLSSLFIRNSISVGAS 187
Query: 179 --LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGF 219
L LL AAAL+TL+++IAINLA+GILPHVDNFAHIGGF+ GF
Sbjct: 188 GALFGLLGAMLSELFTNWTIYTNKAAALVTLLIVIAINLAIGILPHVDNFAHIGGFLTGF 247
Query: 220 LLGFVLLLRPQFGWAERHQLPAQARVKS-RHNPYQYVLCIVALVLLIVGFTVGLVMLFRG 278
LLGF+ L+RP +GW +R+ LP+ + S ++ YQ++L VA VL ++GF VGL MLFRG
Sbjct: 248 LLGFIFLMRPHYGWMQRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRG 307
Query: 279 ENGNDHCSWCHYLSCVPTSKWKCGN 303
N N+ C WCHYLSC+PTS+W CGN
Sbjct: 308 VNANERCHWCHYLSCIPTSRWTCGN 332
>gi|115477653|ref|NP_001062422.1| Os08g0546700 [Oryza sativa Japonica Group]
gi|42408095|dbj|BAD09236.1| putative membrane protein [Oryza sativa Japonica Group]
gi|113624391|dbj|BAF24336.1| Os08g0546700 [Oryza sativa Japonica Group]
gi|215686417|dbj|BAG87702.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218201559|gb|EEC83986.1| hypothetical protein OsI_30137 [Oryza sativa Indica Group]
gi|222640971|gb|EEE69103.1| hypothetical protein OsJ_28172 [Oryza sativa Japonica Group]
Length = 323
Score = 351 bits (901), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 177/305 (58%), Positives = 226/305 (74%), Gaps = 30/305 (9%)
Query: 25 GSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWE-GGRGCVARFLGRLSF 83
GSYY E +++W WL+P +VA + VF+V M++N+CP++ G CVA FL + +F
Sbjct: 23 GSYYDE---ERRWWPWLVPTVLVACIVVFLVEMFVNDCPRHGSPLRGESCVAGFLHQFAF 79
Query: 84 EPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIG 143
+PL+ENPL GPSS+TL+K+GAL+W +VVH+HQ WRLI+CIWLHAG+IHL+ NMLSL+FIG
Sbjct: 80 QPLRENPLLGPSSATLEKMGALDWAKVVHQHQAWRLISCIWLHAGLIHLIVNMLSLLFIG 139
Query: 144 IRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFN-----------------AVSLLVL--- 182
+RLEQQFGFVR+G +YLLSGFGG+ +LFL N +S L++
Sbjct: 140 LRLEQQFGFVRIGIIYLLSGFGGSVLSVLFLRNNYISVGASGALFGLLGSMLSELIMNWT 199
Query: 183 ----LAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
AAA++TL+ IIAINLA+GILPH DNFAHIGGF+ GFLLGFVLL RPQFGW ERH+
Sbjct: 200 IYSNKAAAIITLLFIIAINLAIGILPHADNFAHIGGFVTGFLLGFVLLARPQFGWMERHE 259
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
LP Q ++ YQYVL VAL LL+VGF + LVMLF+G+NGND C WCHYL+C+PTS+
Sbjct: 260 LP-QTNQPRKYRAYQYVLWAVALFLLLVGFVIALVMLFKGKNGNDGCHWCHYLNCIPTSR 318
Query: 299 WKCGN 303
WKC
Sbjct: 319 WKCST 323
>gi|449455106|ref|XP_004145294.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449473549|ref|XP_004153913.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
gi|449508492|ref|XP_004163327.1| PREDICTED: inactive rhomboid protein 1-like [Cucumis sativus]
Length = 383
Score = 350 bits (899), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 185/312 (59%), Positives = 228/312 (73%), Gaps = 33/312 (10%)
Query: 21 SYSSGSYYVEPGSD---QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARF 77
S SG+ +E G ++W WL+P+FVVAN +F ++MY+N+CPKN+ C+ RF
Sbjct: 30 SRPSGTSPIEFGQYRPFKKWVPWLVPVFVVANSVMFTISMYVNDCPKNS----ASCIGRF 85
Query: 78 LGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANML 137
LGR SF+PLKENPL GPSSSTL+K+GALE D+VV+ HQ WRLI+C+WLHAGV H+LANML
Sbjct: 86 LGRFSFQPLKENPLLGPSSSTLEKMGALEVDKVVYGHQAWRLISCLWLHAGVFHILANML 145
Query: 138 SLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA------ 184
SLVFIGIRLEQ+FGFVR+G +Y++SGFGG+ LF+ + +S L LL
Sbjct: 146 SLVFIGIRLEQEFGFVRIGMLYIVSGFGGSLMSALFIQSGISVGASGALFGLLGGMLSEL 205
Query: 185 -----------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW 233
AALLTL+ II INLAVG+LPHVDNFAHIGGF++GFLLGFV L+RPQFGW
Sbjct: 206 LTNWTIYANKLAALLTLLFIIVINLAVGVLPHVDNFAHIGGFISGFLLGFVFLVRPQFGW 265
Query: 234 AERHQLPA--QARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYL 291
+ P + KS++ PYQYVL +V+LVLLI GF VGLV LFRGEN ND CSWCHYL
Sbjct: 266 VSQRNAPRGNSSTSKSKYKPYQYVLWVVSLVLLIAGFAVGLVFLFRGENMNDRCSWCHYL 325
Query: 292 SCVPTSKWKCGN 303
SC+PTSKW C +
Sbjct: 326 SCIPTSKWSCNS 337
>gi|148906261|gb|ABR16286.1| unknown [Picea sitchensis]
Length = 383
Score = 349 bits (896), Expect = 7e-94, Method: Compositional matrix adjust.
Identities = 193/340 (56%), Positives = 236/340 (69%), Gaps = 40/340 (11%)
Query: 1 MASG--DLERGKNISNNNNNR-------GSYSSGSYYVEPGSDQQWTSWLIPMFVVANVA 51
M SG D+ER ++ N+ + Y E +++ +S +I +FVV N+
Sbjct: 1 MGSGPMDIERKGSMDWGRGNKVIHPMQDSPRPAAVPYFEARPNRRRSSCIISLFVVLNIV 60
Query: 52 VFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVV 111
+F+VAM+IN+CPK + G C +FLGR SF+PLKENPLFGPSSSTL+K+GALEW +VV
Sbjct: 61 IFLVAMFINDCPK---DLGDSCTLKFLGRFSFQPLKENPLFGPSSSTLEKMGALEWQKVV 117
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-L 170
EHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ+FGF R+G VYL+S FGG+
Sbjct: 118 KEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQEFGFARIGTVYLVSAFGGSVLSA 177
Query: 171 LFLFNAVS------LLVLLA-----------------AALLTLVVIIAINLAVGILPHVD 207
LF N VS L LL AAL+TLV II +NLA G+LPHVD
Sbjct: 178 LFNQNGVSVGASGALFGLLGAMLSELITNWTIYASKFAALVTLVFIIVVNLAFGLLPHVD 237
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP----AQARVKSRHNPYQYVLCIVALVL 263
NFAHIGGF++GFLLGFV L+RPQFGW R +P + VKS+HN YQY+L +++L+L
Sbjct: 238 NFAHIGGFISGFLLGFVFLMRPQFGWVNRKIIPPGYDVNSVVKSKHNAYQYILGLLSLIL 297
Query: 264 LIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
LIVGFTVGLV+LF G N N HCSWCHYL CVPTS+W C +
Sbjct: 298 LIVGFTVGLVLLFHGVNANKHCSWCHYLDCVPTSRWSCND 337
>gi|225434919|ref|XP_002283488.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 391
Score = 347 bits (890), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 178/294 (60%), Positives = 219/294 (74%), Gaps = 31/294 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W W++P FVVAN+A+F++ M+INNCPKN+ CVA FLGR SF+PLKENPL GP
Sbjct: 54 KRWFPWMVPTFVVANIAMFLITMFINNCPKNS----VSCVADFLGRFSFQPLKENPLLGP 109
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SSSTL+K+GALE +VVH HQ WRLI+CIWLHAGV H+LANMLSLVFIGIRLEQ+FGFVR
Sbjct: 110 SSSTLEKMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVR 169
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLAAALLTLVV--------------- 192
+G +Y++SGFGG+ LF+ +++S L LL L L+
Sbjct: 170 IGLLYVVSGFGGSMLSSLFIQSSISVGASGALFGLLGGMLSELITNWTIYANKFAALLTL 229
Query: 193 --IIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW-AERHQLPAQ--ARVKS 247
II +NLAVGILPHVDNFAHIGGF++GFLLGFV L+RPQFGW ++R+ P VK
Sbjct: 230 ILIIIVNLAVGILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKP 289
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+H YQYVL +++L+LL VGFTVG+VML RG +GND CSWCHYLSCVPTSKW C
Sbjct: 290 KHKMYQYVLWVMSLILLTVGFTVGMVMLLRGVSGNDQCSWCHYLSCVPTSKWSC 343
>gi|363808368|ref|NP_001242000.1| uncharacterized protein LOC100784671 [Glycine max]
gi|255639055|gb|ACU19828.1| unknown [Glycine max]
Length = 330
Score = 346 bits (888), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 198/323 (61%), Positives = 236/323 (73%), Gaps = 26/323 (8%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
DLE G N NN S + SY +P + WTSWL+P+FV NV VF V MY+N+CP+
Sbjct: 9 DLESGGANKNINNISYSAAPTSYVYDP--EVHWTSWLVPLFVAVNVVVFFVVMYVNDCPR 66
Query: 65 NNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIW 124
N CVARFLGR SF+PL+ENPLFGPSSSTL K+GAL WD VV+ HQ WRL+TCIW
Sbjct: 67 KNLGFEGDCVARFLGRFSFQPLRENPLFGPSSSTLTKMGALRWDDVVNHHQAWRLVTCIW 126
Query: 125 LHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS----- 178
LHAGV+HL ANMLSLVFIGIRLEQQFGFVR+G +YLLSGFGG+ LF+ N +S
Sbjct: 127 LHAGVVHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNNISVGASG 186
Query: 179 -LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFL 220
L LL AAAL TL+ II INLA+G+LPHVD+FAHIGGF++GFL
Sbjct: 187 ALFGLLGAMLSELITNWSIYTNKAAALFTLLFIIVINLAIGMLPHVDDFAHIGGFLSGFL 246
Query: 221 LGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGEN 280
LGF+LLLRPQFGW E+ +L A +KS++ YQYVL IV+ +LLIVG ++ LVMLFRGE+
Sbjct: 247 LGFILLLRPQFGWLEQQRLHAGVHLKSKYKAYQYVLWIVSAILLIVGLSIALVMLFRGES 306
Query: 281 GNDHCSWCHYLSCVPTSKWKCGN 303
G DHC WCHYL+CVPTSKWKC +
Sbjct: 307 GYDHCHWCHYLTCVPTSKWKCND 329
>gi|147818034|emb|CAN64890.1| hypothetical protein VITISV_021082 [Vitis vinifera]
Length = 391
Score = 345 bits (885), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 178/294 (60%), Positives = 218/294 (74%), Gaps = 31/294 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W W++P FVVAN+A+F++ M+INNCPKN+ CVA FLGR SF+PLKENPL GP
Sbjct: 54 KRWFPWMVPTFVVANIAMFLITMFINNCPKNS----VSCVADFLGRFSFQPLKENPLLGP 109
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SSSTL+K+GALE +VVH HQ WRLI+CIWLHAGV H+LANMLSLVFIGIRLEQ+FGFVR
Sbjct: 110 SSSTLEKMGALEVSKVVHRHQVWRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVR 169
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLAAALLTLVV--------------- 192
+G +Y++SGFGG+ LF+ +++S L LL L L+
Sbjct: 170 IGLLYVVSGFGGSMLSSLFIQSSISVGASGALFGLLGGMLSELITNWTIYANKFAALLTL 229
Query: 193 --IIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW-AERHQLPAQ--ARVKS 247
II +NLAVGILPHVDNFAHIGGF++GFLLGFV L+RPQFGW ++R+ P VK
Sbjct: 230 ILIIIVNLAVGILPHVDNFAHIGGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAXSVKP 289
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+H YQYVL +++L+LL VGFTVG+VML RG GND CSWCHYLSCVPTSKW C
Sbjct: 290 KHKMYQYVLWVMSLILLTVGFTVGMVMLLRGVXGNDXCSWCHYLSCVPTSKWSC 343
>gi|224104429|ref|XP_002313433.1| predicted protein [Populus trichocarpa]
gi|222849841|gb|EEE87388.1| predicted protein [Populus trichocarpa]
Length = 292
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 176/294 (59%), Positives = 216/294 (73%), Gaps = 31/294 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
+ W WL+P+FVVANVAVFI MY+N+CP N+ CVA LGR SF+PLKENPL GP
Sbjct: 1 KNWVPWLVPLFVVANVAVFIAVMYVNDCPSNS----GSCVAPSLGRFSFQPLKENPLLGP 56
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SSSTL+K+GAL+ +RVVH+HQ WRLI+CIWLHAGV H+LANMLSL+FIGIRLEQ+FGF+R
Sbjct: 57 SSSTLEKMGALDVNRVVHKHQSWRLISCIWLHAGVFHVLANMLSLLFIGIRLEQEFGFLR 116
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTL 190
VG VY++SGFGG+ LF+ +S L LL AALLTL
Sbjct: 117 VGLVYVISGFGGSLLSALFIQTGISVGASGALFGLLGGMLSELITNWTIYANKFAALLTL 176
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA---QARVKS 247
+ IIA+NLAVG+LPHVDNFAHIGGF++GF LGFV L+RPQF W + P +S
Sbjct: 177 LCIIAVNLAVGLLPHVDNFAHIGGFLSGFFLGFVFLIRPQFKWINQKTCPPGYIAPPAQS 236
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+H YQYVL +++L++LI+GFT+GLV LFRG N N++CSWCHYLSCVPTS W C
Sbjct: 237 KHQTYQYVLWVISLIVLIIGFTLGLVALFRGVNVNNNCSWCHYLSCVPTSLWSC 290
>gi|194703068|gb|ACF85618.1| unknown [Zea mays]
gi|195643104|gb|ACG41020.1| membrane protein [Zea mays]
gi|219888419|gb|ACL54584.1| unknown [Zea mays]
gi|224031257|gb|ACN34704.1| unknown [Zea mays]
gi|414591379|tpg|DAA41950.1| TPA: membrane protein [Zea mays]
Length = 327
Score = 343 bits (881), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 183/297 (61%), Positives = 224/297 (75%), Gaps = 26/297 (8%)
Query: 30 EPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKEN 89
E D++W WL+P +VA +AVF+V MY NNCPKN + G CVA FL R SF+PL+EN
Sbjct: 30 EGEEDRKWWPWLVPTVIVACIAVFVVEMYENNCPKNRSQLGGDCVAGFLRRFSFQPLREN 89
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
PL GPSSSTL+K+GAL+W+++VH++QGWRLI+CIWLHAG+IHL+ NMLSL+FIGIRLEQQ
Sbjct: 90 PLLGPSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQ 149
Query: 150 FGFVRVGFVYLLSGFGGAYY-LLFLFN-------AVSLLVLL-----------------A 184
FGFVR+G +YLLSGFGG+ LFL N + +L LL A
Sbjct: 150 FGFVRIGAIYLLSGFGGSVLSALFLRNNYISVGASGALFGLLGSMLSELLMNWTIYSNKA 209
Query: 185 AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
AA++TL+ IIA+NLA+GILPH DNFAHIGGF GFLLGFVLL RPQFGW E H+LP Q
Sbjct: 210 AAIITLLFIIALNLAIGILPHADNFAHIGGFATGFLLGFVLLARPQFGWMEHHELP-QTN 268
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ YQY+L +VALVLL+VGF + LVMLF+G+NGND C WCHYL+CVPTSKWKC
Sbjct: 269 QPPKYKAYQYILWVVALVLLLVGFVISLVMLFKGKNGNDGCHWCHYLNCVPTSKWKC 325
>gi|297849660|ref|XP_002892711.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297338553|gb|EFH68970.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 307
Score = 342 bits (878), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 173/326 (53%), Positives = 221/326 (67%), Gaps = 44/326 (13%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
M+S D+ERG+ +RG D QWTSWL P VVANVA+FIV M+IN
Sbjct: 1 MSSRDMERGRK------HRG-------------DTQWTSWLTPTIVVANVAIFIVVMFIN 41
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
+CPK CVA+FLGR SF+PL+ENPL GPSSSTL+KLGAL+W +VV ++ WRLI
Sbjct: 42 DCPKTTRGANEDCVAKFLGRFSFQPLRENPLLGPSSSTLEKLGALDWRKVVQGNEKWRLI 101
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS- 178
T +WLHAG+ HL NM +++F GIRLEQQFGF+R+G +YL+SGFGG+ LFL N++S
Sbjct: 102 TAMWLHAGIFHLFTNMFNVIFFGIRLEQQFGFLRIGLIYLISGFGGSILSALFLQNSISV 161
Query: 179 -----LLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIGGFM 216
LL L+ A AL +++ IIA++LA+G+LP VDNFAHIGG +
Sbjct: 162 GASGALLGLIGAMLSELVINWTIYESKLCALFSILFIIALDLAIGLLPWVDNFAHIGGLL 221
Query: 217 AGFLLGFVLLLRPQFGWAE-RHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVML 275
GF LGF+LL++PQ GW E R+ AR KS++NP QYVL +A VL++ T+G+VML
Sbjct: 222 TGFFLGFILLIQPQLGWEESRNSSQYGARAKSKYNPCQYVLFFIAAVLVVASLTIGIVML 281
Query: 276 FRGENGNDHCSWCHYLSCVPTSKWKC 301
F+GENGN HC WCH L C PTSKW C
Sbjct: 282 FKGENGNKHCKWCHRLDCYPTSKWSC 307
>gi|356504274|ref|XP_003520922.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 385
Score = 342 bits (876), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 171/294 (58%), Positives = 213/294 (72%), Gaps = 31/294 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W SWLIP+FVVAN+ +F++ MY+NNCP+N+ C+A FLGR SF+P KENPL GP
Sbjct: 48 RKWFSWLIPLFVVANIVMFVITMYVNNCPRNS----VSCIASFLGRFSFQPFKENPLLGP 103
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS TLQK+GAL+ RVVH HQGWRLITC+WLHAGV HLLANML ++ IGIRLEQ+FGFV
Sbjct: 104 SSLTLQKMGALDVSRVVHRHQGWRLITCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVL 163
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTL 190
+G ++++SGFGG+ LF+ + +S L LL ALLTL
Sbjct: 164 IGLLFVISGFGGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWSIYDNKLTALLTL 223
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARVKS 247
V+II INLAVGILPHVDNFAHIGGF+ GFLLGFV L+RPQFGW + P + RVK
Sbjct: 224 VIIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRVKP 283
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ YQ +L + +L++L+VG +VGLV L +G + NDHCSWCHYLSCVPTSKW C
Sbjct: 284 KFKKYQCILWVFSLIILVVGLSVGLVALLQGVDANDHCSWCHYLSCVPTSKWSC 337
>gi|42569431|ref|NP_180469.3| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|110737035|dbj|BAF00472.1| hypothetical protein [Arabidopsis thaliana]
gi|330253108|gb|AEC08202.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 389
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 174/293 (59%), Positives = 212/293 (72%), Gaps = 33/293 (11%)
Query: 37 WTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSS 96
W WL+P VVAN+A+F ++M+INNCPKN+ C+ARFLGR +F+P+KENPL GPSS
Sbjct: 54 WFPWLVPAIVVANIALFAISMFINNCPKNS----AYCLARFLGRFAFQPMKENPLLGPSS 109
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
TL+K+GAL+ VVH+H+ WRL TCIWLHAGV H+LANMLSL+FIGIRLEQ+FGFVR+G
Sbjct: 110 LTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIG 169
Query: 157 FVYLLSGFGGAYYLLFLFNAVSLLV----------------LLA---------AALLTLV 191
+Y++SGFGG+ L LFN + V LL AALLTL+
Sbjct: 170 LLYMISGFGGS-LLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLI 228
Query: 192 VIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARVKSR 248
IIAINLAVGILPHVDNFAH+GGF +GFLLGFV L+RPQ+G+ + P A KS+
Sbjct: 229 FIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSK 288
Query: 249 HNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
H PYQYVL I +LVLLI G+T GLV+L RG + N HCSWCHYLSC+PTS W C
Sbjct: 289 HKPYQYVLWITSLVLLIAGYTAGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSC 341
>gi|242040475|ref|XP_002467632.1| hypothetical protein SORBIDRAFT_01g031210 [Sorghum bicolor]
gi|241921486|gb|EER94630.1| hypothetical protein SORBIDRAFT_01g031210 [Sorghum bicolor]
Length = 335
Score = 341 bits (875), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 179/335 (53%), Positives = 224/335 (66%), Gaps = 36/335 (10%)
Query: 2 ASGDLERGKNISNNNNNRGSYSSGSYYVEP---GSDQQWTSWLIPMFVVANVAVFIVAMY 58
A D+E+G N + YS + ++ P +++W W +P+ N+ +F VAMY
Sbjct: 4 ARYDVEKG---GRNGEGKQRYSPQAEHLYPPQRDGEREWVPWFVPLVAAVNIVLFAVAMY 60
Query: 59 INNCPKN-----NWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHE 113
+NNCP + G FL R SF+PL ENPL GPSS+TLQKLGAL WD+VV E
Sbjct: 61 VNNCPAHASRRGGGGAGACVARGFLHRFSFQPLSENPLLGPSSATLQKLGALVWDKVVQE 120
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLF 172
HQGWRL+TCIWLHAGV HLLANM+SLV IG+RLEQQFG+VR+G +YL+SG GG+ LF
Sbjct: 121 HQGWRLVTCIWLHAGVAHLLANMVSLVLIGLRLEQQFGYVRIGIIYLVSGVGGSVLSSLF 180
Query: 173 LFNAVS------LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNF 209
+ N +S L LL AAAL+TL+++IAINLA+GILPHVDNF
Sbjct: 181 VRNTISVGASGALFGLLGAMLSELFTNWTIYSNKAAALVTLLIVIAINLAIGILPHVDNF 240
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKS-RHNPYQYVLCIVALVLLIVGF 268
AHIGGF+ GFLLGFV L+RP +GW +R+ LP+ + S ++ YQ+ L VA VL +VGF
Sbjct: 241 AHIGGFLTGFLLGFVFLMRPHYGWMQRYVLPSDVKYTSKKYLAYQWALLAVASVLAVVGF 300
Query: 269 TVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
VGL MLFRG N NDHC WCHYLSCVPTS+W CG
Sbjct: 301 AVGLGMLFRGVNANDHCGWCHYLSCVPTSRWSCGK 335
>gi|294845|gb|AAA02747.1| membrane protein [Saccharum hybrid cultivar H65-7052]
Length = 325
Score = 341 bits (874), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 184/297 (61%), Positives = 225/297 (75%), Gaps = 27/297 (9%)
Query: 30 EPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKEN 89
E D++W WL+P +VA +AVF+V MY NNCPK+ + G GCVA FL R SF+PL+EN
Sbjct: 29 EGPEDRKWWPWLVPTVIVACIAVFVVEMYENNCPKHGSQLG-GCVAGFLRRFSFQPLREN 87
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
PL GPSSSTL+K+GAL+W+++VH+ QGWRLI+CIWLHAG+IHL+ NMLSL+FIGIRLEQQ
Sbjct: 88 PLLGPSSSTLEKMGALDWNKIVHQDQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQ 147
Query: 150 FGFVRVGFVYLLSGFGGAYY-LLFLFN-------AVSLLVLL-----------------A 184
FGFVR+G +YLLSGFGG+ LFL N + +L LL A
Sbjct: 148 FGFVRIGAIYLLSGFGGSVLSALFLRNNYISVGASGALFGLLGSMLSELLMNWTIYSNKA 207
Query: 185 AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
AA++TL+ IIA+NLA+GILPHVDNFAHIGGF GFLLGFVLL RPQF W ERH+LP Q
Sbjct: 208 AAIITLLFIIALNLAIGILPHVDNFAHIGGFATGFLLGFVLLARPQFSWMERHELP-QTN 266
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ YQY+L +VALVLL+VGF + LVMLF+G+NGND C WCHYL+CVPTSKWKC
Sbjct: 267 QPPKYKAYQYILWVVALVLLLVGFVISLVMLFKGKNGNDGCHWCHYLNCVPTSKWKC 323
>gi|357114368|ref|XP_003558972.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 331
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 177/337 (52%), Positives = 229/337 (67%), Gaps = 40/337 (11%)
Query: 1 MAS-GDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYI 59
MAS D+E+G G Y + +++WT WL+P +VAN+ VF + MY
Sbjct: 1 MASRADVEKG------GKQGGKVVPAPLYPQHEGEREWTPWLVPSILVANIVVFAITMYY 54
Query: 60 NNCPKNNWEGG-RG-------CVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVV 111
NNCP +N G RG CVA FLGR SF+PL++NPL GPSS+TL+K+GAL WD+VV
Sbjct: 55 NNCPAHNANTGTRGGSKQQQQCVAGFLGRFSFQPLRQNPLLGPSSATLEKMGALVWDKVV 114
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-L 170
H HQGWRL++C+WLHAG++HLLANMLSL+FIG+RLEQQFG+VR+G +YLLSG GG+
Sbjct: 115 HSHQGWRLLSCMWLHAGILHLLANMLSLLFIGLRLEQQFGYVRIGAIYLLSGIGGSVLSS 174
Query: 171 LFLFNAVS------LLVLLA-----------------AALLTLVVIIAINLAVGILPHVD 207
LF+ ++S L LL AA++TL+ +I +NL +GILPHV+
Sbjct: 175 LFIRTSISVGASGALFGLLGAMLSELLTNWTIYTNKVAAVMTLLFVITVNLVLGILPHVN 234
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSR-HNPYQYVLCIVALVLLIV 266
NFAHIGGF+AGFLLGFV+L+RP +GW ER+ LPA SR + YQ+VL VAL+L ++
Sbjct: 235 NFAHIGGFLAGFLLGFVVLMRPHYGWMERYSLPAGTPCTSRKYLLYQWVLMAVALLLGVI 294
Query: 267 GFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
GF GL M+FRG N N C WCHYLSCVPT++W C N
Sbjct: 295 GFAAGLAMVFRGVNANSSCHWCHYLSCVPTARWTCAN 331
>gi|326529191|dbj|BAK00989.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 326
Score = 340 bits (873), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 180/329 (54%), Positives = 226/329 (68%), Gaps = 33/329 (10%)
Query: 1 MASGDLE-RGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYI 59
MASG E + SY +G+ Y E +QW WL+P + A V+VF V MY+
Sbjct: 1 MASGSGEGKAGRAGAGYQQYASYGTGTGYDE----RQWWPWLVPTVLGACVSVFAVEMYL 56
Query: 60 NNCPK--NNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGW 117
N+CP+ + G CVA FL + SF+PL+ENPL GPSS+TL+K+GAL+W +VVH+HQ W
Sbjct: 57 NDCPRHGSTLGGDAPCVAGFLRQFSFQPLRENPLLGPSSATLEKMGALDWAKVVHQHQWW 116
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFN- 175
RL +C+WLHAG+IHL+ NM+SL+FIGIRLEQQFGFVR+G +YLLSGFGG+ LFL N
Sbjct: 117 RLFSCVWLHAGLIHLIVNMMSLLFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSALFLRNH 176
Query: 176 ------AVSLLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHI 212
+ +L LL AAA+ TL+ IIAINLA+GILPH DNFAHI
Sbjct: 177 YISVGASGALFGLLGSMLSELIMNWTIYSNKAAAITTLLFIIAINLAIGILPHADNFAHI 236
Query: 213 GGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGL 272
GGF++GFL GFVLL RPQFGW ERH+LP Q ++ YQY L AL+ L+VG+ VGL
Sbjct: 237 GGFVSGFLFGFVLLARPQFGWMERHELP-QTDQPPKYKMYQYALWGAALLFLLVGYVVGL 295
Query: 273 VMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
MLF+G+NGND C WC YL+CVPTS+WKC
Sbjct: 296 AMLFKGKNGNDGCHWCRYLNCVPTSRWKC 324
>gi|297822631|ref|XP_002879198.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
gi|297325037|gb|EFH55457.1| hypothetical protein ARALYDRAFT_481823 [Arabidopsis lyrata subsp.
lyrata]
Length = 387
Score = 340 bits (873), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 174/293 (59%), Positives = 212/293 (72%), Gaps = 33/293 (11%)
Query: 37 WTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSS 96
W WL+P VVAN+A+F ++M+INNCPKN+ C ARFLGR +F+P+KENPL GPSS
Sbjct: 52 WFPWLVPAIVVANIALFAISMFINNCPKNS----AYCSARFLGRFAFQPMKENPLLGPSS 107
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
TL+K+GAL+ VVH+H+ WRL TCIWLHAGV H+LANMLSL+FIGIRLEQ+FGFVR+G
Sbjct: 108 LTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVRIG 167
Query: 157 FVYLLSGFGGAYYLLFLFNAVSLLV----------------LLA---------AALLTLV 191
+Y++SGFGG+ L LFN + V LL AALLTL+
Sbjct: 168 LLYMISGFGGS-LLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKFAALLTLI 226
Query: 192 VIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARVKSR 248
IIAINLAVGILPHVDNFAH+GGF +GFLLGFV L+RPQ+G+ + P A KS+
Sbjct: 227 FIIAINLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRSYAAPSAKSK 286
Query: 249 HNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
H PYQYVL I +L+LLI G+TVGLV+L RG + N HCSWCHYLSC+PTS W C
Sbjct: 287 HKPYQYVLWITSLLLLIAGYTVGLVVLLRGTDLNKHCSWCHYLSCIPTSLWSC 339
>gi|363807474|ref|NP_001242137.1| uncharacterized protein LOC100805186 [Glycine max]
gi|255644920|gb|ACU22960.1| unknown [Glycine max]
Length = 384
Score = 339 bits (870), Expect = 8e-91, Method: Compositional matrix adjust.
Identities = 171/294 (58%), Positives = 213/294 (72%), Gaps = 31/294 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W +WLIP+FVVANVA+F + MY+NNCP+N+ C+A FLGR SF+P KENPL GP
Sbjct: 47 RKWFAWLIPLFVVANVAMFAITMYVNNCPRNS----VSCIASFLGRFSFQPFKENPLLGP 102
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS TLQK+GAL+ RVVH+HQGWRL+TC+WLHAGV HLLANML ++ IGIRLEQ+FGFV
Sbjct: 103 SSLTLQKMGALDVSRVVHKHQGWRLVTCMWLHAGVFHLLANMLGILVIGIRLEQEFGFVL 162
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTL 190
+G ++ +SGFGG+ LF+ + +S L LL AALLTL
Sbjct: 163 IGLLFFISGFGGSLLSALFIQSNISVGASGALFGLLGGMLSELITNWSIYDNKLAALLTL 222
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARVKS 247
V+II INLAVGILPHVDNFAHIGGF+ GFLLGFV L+RPQFGW + P + R K
Sbjct: 223 VIIIVINLAVGILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWVNQRYAPLNYSPGRSKP 282
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ YQ +L +++L++L+VG +VGLV L RG + ND CSWCHYLSCVPTSKW C
Sbjct: 283 KFKKYQCILWVLSLIILVVGLSVGLVALLRGVDANDRCSWCHYLSCVPTSKWSC 336
>gi|222616447|gb|EEE52579.1| hypothetical protein OsJ_34868 [Oryza sativa Japonica Group]
Length = 864
Score = 339 bits (869), Expect = 1e-90, Method: Compositional matrix adjust.
Identities = 170/311 (54%), Positives = 215/311 (69%), Gaps = 36/311 (11%)
Query: 20 GSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLG 79
GS + YY ++WT W++ ++ V VF+V+MY+N+CP+ N C A FLG
Sbjct: 27 GSLRARPYY------RRWTPWIVAAIALSCVVVFLVSMYVNDCPRRN---SGDCAAGFLG 77
Query: 80 RLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSL 139
R +F+PLKENPL GPSS+TL K+GAL+ +VVH HQGWRLITCIWLHAGV+HLL NML L
Sbjct: 78 RFAFQPLKENPLLGPSSATLLKMGALDVTKVVHGHQGWRLITCIWLHAGVVHLLINMLCL 137
Query: 140 VFIGIRLEQQFGFVRVGFVYLLSGFGGA-YYLLFLFNAV--------------------- 177
+FIGIRLEQ+FGFVR+G VYL+SG GG+ LF+ +++
Sbjct: 138 LFIGIRLEQEFGFVRIGLVYLISGLGGSLMSALFIRSSISVGASGALFGLIGSMLSELIT 197
Query: 178 --SLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW-A 234
SL AALLTLV +I +NLA+GILP VDNFAHIGG ++GFLLGFV+ +RPQF W
Sbjct: 198 NWSLYANKVAALLTLVFVIVVNLALGILPRVDNFAHIGGLISGFLLGFVMFIRPQFAWIN 257
Query: 235 ERHQLPAQ--ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLS 292
+R P Q A VK +H YQY+L + A ++LIVGFTV +V+L RG N NDHCSWCHYLS
Sbjct: 258 QRRVAPGQQPAPVKRKHKTYQYILWLAAAIMLIVGFTVAIVLLLRGYNANDHCSWCHYLS 317
Query: 293 CVPTSKWKCGN 303
CVPT +WKC +
Sbjct: 318 CVPTKRWKCNS 328
>gi|224054696|ref|XP_002298351.1| predicted protein [Populus trichocarpa]
gi|222845609|gb|EEE83156.1| predicted protein [Populus trichocarpa]
Length = 328
Score = 338 bits (867), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 178/329 (54%), Positives = 222/329 (67%), Gaps = 34/329 (10%)
Query: 2 ASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINN 61
A D+ K NN GS Y ++W WL+P+FVV+N+AVFI MY+N+
Sbjct: 7 AGNDIVEIKVHPRRENNVGSPPP---YQNKAVFKKWVPWLVPLFVVSNIAVFIAVMYVND 63
Query: 62 CPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLIT 121
CP N+ CVA LGR SF+PLKENPL GPSSSTL K+GAL+ RVV++HQ WRLI+
Sbjct: 64 CPTNS----GSCVAPSLGRFSFQPLKENPLLGPSSSTLVKMGALDVARVVNKHQSWRLIS 119
Query: 122 CIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS-- 178
CIWLHAGV H++ANMLSL+ IGIRLEQ+FGF R+G VY++SGFGG+ LF+ +S
Sbjct: 120 CIWLHAGVFHVVANMLSLLLIGIRLEQEFGFFRIGLVYVISGFGGSLLSALFIQTGISVG 179
Query: 179 ----LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMA 217
L LL +AAL TL+ IIAINLAVG+LPHVDN+AHIGGF++
Sbjct: 180 ASGALFGLLGGMLSELITNWTIYANKSAALTTLLCIIAINLAVGLLPHVDNYAHIGGFLS 239
Query: 218 GFLLGFVLLLRPQFGWAERHQLPA---QARVKSRHNPYQYVLCIVALVLLIVGFTVGLVM 274
GF LGFV L+RPQF W + P KS+H YQYVL +V+L+++I+GFT+G+V
Sbjct: 240 GFFLGFVFLIRPQFKWINQKACPPGYIAPPAKSKHKAYQYVLWVVSLIVIIIGFTLGMVA 299
Query: 275 LFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L RG N NDHCSWCHYLSCVPTS W C +
Sbjct: 300 LLRGVNVNDHCSWCHYLSCVPTSLWSCNS 328
>gi|356557429|ref|XP_003547018.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 389
Score = 337 bits (864), Expect = 3e-90, Method: Compositional matrix adjust.
Identities = 178/298 (59%), Positives = 215/298 (72%), Gaps = 31/298 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W WL+P FVVAN+ VFIV MYIN+CPK+++ G CVA FLGR SF+PLKENPLFGP
Sbjct: 47 KRWFPWLVPTFVVANIVVFIVTMYINDCPKHSFYGS--CVASFLGRFSFQPLKENPLFGP 104
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SSSTL+K+GALE +V+H HQ WRL +CIWLH GV+HLLANMLSLVFIGIRLEQ+FGFVR
Sbjct: 105 SSSTLEKMGALEVGKVIHRHQVWRLFSCIWLHGGVVHLLANMLSLVFIGIRLEQEFGFVR 164
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTL 190
+GF+Y++SGFGG+ LF+ +S L LL AALLTL
Sbjct: 165 IGFLYVISGFGGSLLSALFIQEGISVGASGALFGLLGGMLSELLINWTIYANKFAALLTL 224
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWA-----ERHQLPAQARV 245
+VI+ INLAVGILPHVDNFAHIGGF++GFLLGF+ L+RPQF W H A V
Sbjct: 225 IVIVVINLAVGILPHVDNFAHIGGFVSGFLLGFIFLIRPQFKWVSSRHRNSHSSAAAPSV 284
Query: 246 KSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
K +H PYQY L +++ +LLI G GLV+L R N ND CSWCHYLSC+PTSKW C +
Sbjct: 285 KYKHKPYQYALWVISFILLIAGLVTGLVLLLRSANLNDRCSWCHYLSCIPTSKWSCKS 342
>gi|242049912|ref|XP_002462700.1| hypothetical protein SORBIDRAFT_02g030450 [Sorghum bicolor]
gi|241926077|gb|EER99221.1| hypothetical protein SORBIDRAFT_02g030450 [Sorghum bicolor]
Length = 325
Score = 336 bits (861), Expect = 9e-90, Method: Compositional matrix adjust.
Identities = 183/294 (62%), Positives = 224/294 (76%), Gaps = 27/294 (9%)
Query: 33 SDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLF 92
D++W WL+P +VA +AVF+V MY NNCPKN + G GCVA FL R SF+PL+ENPL
Sbjct: 32 EDRKWWPWLVPTVIVACIAVFVVEMYENNCPKNRSQLG-GCVAGFLRRFSFQPLRENPLL 90
Query: 93 GPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 152
GPSSSTL+K+GAL+W+++VH++QGWRLI+CIWLHAG+IHL+ NMLSL+FIGIRLEQQFGF
Sbjct: 91 GPSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGF 150
Query: 153 VRVGFVYLLSGFGGAYY-LLFLFN-------AVSLLVLL-----------------AAAL 187
VR+G +YLLSGFGG+ LFL N + +L LL AAA+
Sbjct: 151 VRIGAIYLLSGFGGSVLSALFLRNNYISVGASGALFGLLGSMLSELLMNWTIYSNKAAAI 210
Query: 188 LTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKS 247
+TL+ I+A+NLA+GILPH DNFAHIGGF GFLLGFVLL RPQF W ERH+LP Q
Sbjct: 211 ITLLFIVALNLAIGILPHADNFAHIGGFATGFLLGFVLLARPQFSWMERHELP-QTNQPP 269
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ YQY+L +VALVLL+VGF V LVMLF+G+NGND C WCHYL+CVPTSKWKC
Sbjct: 270 KYKAYQYILWVVALVLLLVGFVVSLVMLFKGKNGNDGCHWCHYLNCVPTSKWKC 323
>gi|255584755|ref|XP_002533096.1| KOM, putative [Ricinus communis]
gi|223527108|gb|EEF29288.1| KOM, putative [Ricinus communis]
Length = 408
Score = 335 bits (859), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 171/317 (53%), Positives = 220/317 (69%), Gaps = 32/317 (10%)
Query: 12 ISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGR 71
++++N + S+G + ++W WL+P+FV ANV +F+ MY+NNCP N+ +
Sbjct: 47 VASHNQQQNVSSAGEFR----PFRRWLPWLVPLFVGANVVLFVTTMYVNNCPSNSMKP-E 101
Query: 72 GCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIH 131
C+A+FLGR SF+P+KENPL GPSSSTL+K+GAL+ D+VV HQ WRL++C+WLHAGV H
Sbjct: 102 SCIAKFLGRFSFQPMKENPLLGPSSSTLEKMGALDVDKVVDGHQAWRLLSCMWLHAGVFH 161
Query: 132 LLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS---------LLV 181
+LANMLSLVFIGIRLEQ+FGF+R+G VY++SGFGG+ LF+ + +S LL
Sbjct: 162 ILANMLSLVFIGIRLEQEFGFIRIGLVYVISGFGGSLLSALFIQSNISVGASGALFGLLG 221
Query: 182 LLAAALLTLVVIIAINL--------------AVGILPHVDNFAHIGGFMAGFLLGFVLLL 227
+ + L+T I A L AVGILPHVDNFAHIGGF +GFLLGFV L+
Sbjct: 222 GMLSELITNWTIYANKLAALLTLVLIIIINLAVGILPHVDNFAHIGGFFSGFLLGFVFLI 281
Query: 228 RPQFGWAERHQLPA---QARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDH 284
RPQFGW + P KS+H YQYVL +V+++LLIVGF VGLV L RG N NDH
Sbjct: 282 RPQFGWVNQKACPPGYIAPPAKSKHKTYQYVLWVVSVILLIVGFAVGLVTLLRGTNLNDH 341
Query: 285 CSWCHYLSCVPTSKWKC 301
CSWCHY+SCVPTS W C
Sbjct: 342 CSWCHYMSCVPTSLWSC 358
>gi|15222058|ref|NP_172735.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|145323878|ref|NP_001077528.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|334182523|ref|NP_001184975.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|17529034|gb|AAL38727.1| putative membrane protein [Arabidopsis thaliana]
gi|20259083|gb|AAM14257.1| putative membrane protein [Arabidopsis thaliana]
gi|332190800|gb|AEE28921.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|332190801|gb|AEE28922.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
gi|332190802|gb|AEE28923.1| RHOMBOID-like protein 6 [Arabidopsis thaliana]
Length = 307
Score = 334 bits (857), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 173/326 (53%), Positives = 215/326 (65%), Gaps = 44/326 (13%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
M S D+ERG+ +RG D QWT+WL P VVANV++FIV MY N
Sbjct: 1 MRSRDMERGRK------HRG-------------DTQWTAWLTPTIVVANVSIFIVVMYTN 41
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
+CPK CVA+ L R SF+PL+ENP GPSSSTL+KLGAL+W +VV ++ WRLI
Sbjct: 42 DCPKTTTGANGDCVAKLLRRFSFQPLRENPFLGPSSSTLEKLGALDWKKVVQGNEKWRLI 101
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS- 178
T +WLHAG+IHL+ NM ++ GIRLEQQFGF+R+G +YL+SGFGG+ LFL ++S
Sbjct: 102 TAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFIRIGLIYLISGFGGSILSALFLQKSISV 161
Query: 179 -----LLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIGGFM 216
LL L+ A ALL+ + IIAINLA+G+LP VDNFAHIGG +
Sbjct: 162 GASGALLGLMGAMLSELLTNWTIYKSKLCALLSFLFIIAINLAIGLLPWVDNFAHIGGLL 221
Query: 217 AGFLLGFVLLLRPQFGWAE-RHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVML 275
GF LGF+LL++PQ GW E R+ AR +S++NP QYVL VA VL++ G TVGLVML
Sbjct: 222 TGFCLGFILLMQPQSGWEEFRNSSQYGARARSKYNPCQYVLFFVAAVLVVAGLTVGLVML 281
Query: 276 FRGENGNDHCSWCHYLSCVPTSKWKC 301
F GENGN HC WCH L C PTSKW C
Sbjct: 282 FDGENGNKHCKWCHRLDCYPTSKWSC 307
>gi|115486807|ref|NP_001068547.1| Os11g0704800 [Oryza sativa Japonica Group]
gi|62733172|gb|AAX95289.1| Rhomboid family, putative [Oryza sativa Japonica Group]
gi|77552712|gb|ABA95509.1| rhomboid family protein, putative, expressed [Oryza sativa Japonica
Group]
gi|113645769|dbj|BAF28910.1| Os11g0704800 [Oryza sativa Japonica Group]
Length = 374
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 170/311 (54%), Positives = 215/311 (69%), Gaps = 36/311 (11%)
Query: 20 GSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLG 79
GS + YY ++WT W++ ++ V VF+V+MY+N+CP+ N C A FLG
Sbjct: 27 GSLRARPYY------RRWTPWIVAAIALSCVVVFLVSMYVNDCPRRN---SGDCAAGFLG 77
Query: 80 RLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSL 139
R +F+PLKENPL GPSS+TL K+GAL+ +VVH HQGWRLITCIWLHAGV+HLL NML L
Sbjct: 78 RFAFQPLKENPLLGPSSATLLKMGALDVTKVVHGHQGWRLITCIWLHAGVVHLLINMLCL 137
Query: 140 VFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAV--------------------- 177
+FIGIRLEQ+FGFVR+G VYL+SG GG+ LF+ +++
Sbjct: 138 LFIGIRLEQEFGFVRIGLVYLISGLGGSLMSALFIRSSISVGASGALFGLIGSMLSELIT 197
Query: 178 --SLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWA- 234
SL AALLTLV +I +NLA+GILP VDNFAHIGG ++GFLLGFV+ +RPQF W
Sbjct: 198 NWSLYANKVAALLTLVFVIVVNLALGILPRVDNFAHIGGLISGFLLGFVMFIRPQFAWIN 257
Query: 235 ERHQLPAQ--ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLS 292
+R P Q A VK +H YQY+L + A ++LIVGFTV +V+L RG N NDHCSWCHYLS
Sbjct: 258 QRRVAPGQQPAPVKRKHKTYQYILWLAAAIMLIVGFTVAIVLLLRGYNANDHCSWCHYLS 317
Query: 293 CVPTSKWKCGN 303
CVPT +WKC +
Sbjct: 318 CVPTKRWKCNS 328
>gi|356547255|ref|XP_003542031.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 392
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 174/298 (58%), Positives = 213/298 (71%), Gaps = 31/298 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W WL+P FVVAN+ VFIV MYIN+CP +++ G CVA FLGR SF+PLKENPL GP
Sbjct: 50 KRWFPWLVPTFVVANIVVFIVTMYINDCPNHSFYGS--CVASFLGRFSFQPLKENPLLGP 107
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SSSTL+K+GALE +V+H HQ WRL +CIWLH GV+H+LANMLSLVFIGIRLEQ+FGFVR
Sbjct: 108 SSSTLEKMGALEVGKVIHGHQVWRLFSCIWLHGGVVHVLANMLSLVFIGIRLEQEFGFVR 167
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTL 190
+GF+Y++SGFGG+ LF+ +S L LL AALLTL
Sbjct: 168 IGFLYVISGFGGSLLSALFIQEGISVGASGALFGLLGGMLSELLINWTIYANKFAALLTL 227
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE-----RHQLPAQARV 245
+VI+ INLA+G+LPHVDNFAHIGGF++GF LGF+ L+RPQF W H A V
Sbjct: 228 IVIVVINLAIGVLPHVDNFAHIGGFVSGFFLGFIFLIRPQFKWVSSRHRNSHSTAAAPSV 287
Query: 246 KSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
K +H PYQY L +++ +LLI G GLV+L RG N ND CSWCHYLSCVPTSKW C +
Sbjct: 288 KYKHKPYQYALWVISFILLIAGLVTGLVLLLRGVNLNDRCSWCHYLSCVPTSKWSCKS 345
>gi|357159526|ref|XP_003578474.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 330
Score = 334 bits (856), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 176/292 (60%), Positives = 218/292 (74%), Gaps = 26/292 (8%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W WL+P +VA +AVF+V M++N+CP++ G GCV FL R SF+PL+ENPL GP
Sbjct: 38 RKWWPWLVPTVIVACIAVFVVEMWVNDCPRHGSALGGGCVVGFLRRFSFQPLRENPLLGP 97
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS+TL K+GAL+W++VVHEHQGWRLI+CIWLHAG+IHL+ NMLSL+FIGIRLEQQFGFVR
Sbjct: 98 SSATLGKMGALDWNKVVHEHQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVR 157
Query: 155 VGFVYLLSGFGGAYY--LLFLFNAVS------LLVLLA-----------------AALLT 189
+G +YLLSGFGG+ L N +S L LL AA++T
Sbjct: 158 IGAIYLLSGFGGSVLSALFLRSNYISVGASGALFGLLGSMLSELIMNWTIYSNKVAAIIT 217
Query: 190 LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRH 249
L+ IIAIN+A+GILPH DNFAHIGGF+ GFLLGFVLL RPQFGW ER++LP ++
Sbjct: 218 LLFIIAINMAIGILPHADNFAHIGGFVTGFLLGFVLLARPQFGWMERNELP-HTNQPPKY 276
Query: 250 NPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
YQYVL +VAL+LL+VGF LVMLF+G+NGND C WCHYL+CVPTSKWKC
Sbjct: 277 KAYQYVLWVVALLLLLVGFVTSLVMLFKGKNGNDGCHWCHYLNCVPTSKWKC 328
>gi|226504776|ref|NP_001142335.1| membrane protein [Zea mays]
gi|194708266|gb|ACF88217.1| unknown [Zea mays]
gi|224034285|gb|ACN36218.1| unknown [Zea mays]
gi|414886370|tpg|DAA62384.1| TPA: membrane protein [Zea mays]
Length = 324
Score = 333 bits (855), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 179/294 (60%), Positives = 222/294 (75%), Gaps = 27/294 (9%)
Query: 33 SDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLF 92
+++W WL+P +VA +AVF+V MY NNCPK+ + G CVA FL R SF+PL+ENPL
Sbjct: 31 EERKWWPWLVPTVIVACIAVFVVEMYENNCPKHGSQLGD-CVAGFLRRFSFQPLRENPLL 89
Query: 93 GPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 152
GPSSSTL+K+GAL+W+++VH++QGWRLI+CIWLHAG+IHL+ NMLSL+FIGIRLEQQFGF
Sbjct: 90 GPSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGF 149
Query: 153 VRVGFVYLLSGFGGAYY-LLFLFNAV--------------SLLVLL----------AAAL 187
VR+G +YLLSGFGG+ LFL N+ S+L L AAA+
Sbjct: 150 VRIGAIYLLSGFGGSVLSALFLRNSYISVGASGALFGLLGSMLSELLMNWTIYSNKAAAI 209
Query: 188 LTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKS 247
+TL+ IIA+NLA+GILPHVDNFAHIGGF GFLLGFVLL RPQF W E H+LP
Sbjct: 210 ITLLFIIALNLAIGILPHVDNFAHIGGFATGFLLGFVLLARPQFSWMESHELP-HTNQPP 268
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ YQY+L +VALVLL+VGF + LVMLF+G+NGND C WCHYL+CVPTSKWKC
Sbjct: 269 KYKAYQYILWVVALVLLLVGFVISLVMLFKGKNGNDGCHWCHYLNCVPTSKWKC 322
>gi|226532718|ref|NP_001149879.1| membrane protein [Zea mays]
gi|194700888|gb|ACF84528.1| unknown [Zea mays]
gi|195635233|gb|ACG37085.1| membrane protein [Zea mays]
gi|414864370|tpg|DAA42927.1| TPA: membrane protein [Zea mays]
Length = 322
Score = 333 bits (853), Expect = 7e-89, Method: Compositional matrix adjust.
Identities = 167/325 (51%), Positives = 219/325 (67%), Gaps = 32/325 (9%)
Query: 4 GDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCP 63
D+E+G G S Y G +++W WL+P+ VA++ VF+V MY NNCP
Sbjct: 5 ADVEKG---GPARKEPGKVPSPLYPQHEG-EREWVPWLVPVIFVASITVFVVTMYANNCP 60
Query: 64 KNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCI 123
+ CVARFLGR SF+PL++NPLFGPSS+TL K+GAL W++VVH HQGWRL++ +
Sbjct: 61 ARD---TNKCVARFLGRFSFQPLRQNPLFGPSSATLTKMGALVWEKVVHRHQGWRLLSSM 117
Query: 124 WLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVSLLVL 182
WLHAGVIHL+ANML L+FIG+RLEQQFG+VR+G +Y+LSG GGA L + N V++
Sbjct: 118 WLHAGVIHLVANMLCLLFIGMRLEQQFGYVRIGAIYVLSGVGGAVLSSLVVRNRVTVGAS 177
Query: 183 L-----------------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGF 219
AAA+ TL+ + A+NL +G+LPHVDN AH+GGF+AGF
Sbjct: 178 GALLGLLGAMLSELLTNWTIYTNKAAAVATLLSVAAVNLVLGVLPHVDNLAHLGGFLAGF 237
Query: 220 LLGFVLLLRPQFGWAERHQLPAQARVKSR-HNPYQYVLCIVALVLLIVGFTVGLVMLFRG 278
LLGFV+L+RP GW ER+ LPA A +R + YQ+ L VA+++L+VGF G+ MLFRG
Sbjct: 238 LLGFVVLMRPHLGWMERYGLPAGAPCTARKYLAYQWTLLAVAIIILLVGFAAGMAMLFRG 297
Query: 279 ENGNDHCSWCHYLSCVPTSKWKCGN 303
N ND C WCHYLSCVPT++W C N
Sbjct: 298 ANANDSCHWCHYLSCVPTARWNCTN 322
>gi|15240744|ref|NP_196342.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
gi|7546703|emb|CAB87281.1| membrane protein [Arabidopsis thaliana]
gi|16648762|gb|AAL25572.1| AT5g07250/T28J14_190 [Arabidopsis thaliana]
gi|20466143|gb|AAM19993.1| AT5g07250/T28J14_190 [Arabidopsis thaliana]
gi|332003744|gb|AED91127.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
Length = 346
Score = 333 bits (853), Expect = 8e-89, Method: Compositional matrix adjust.
Identities = 189/308 (61%), Positives = 230/308 (74%), Gaps = 28/308 (9%)
Query: 23 SSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGR---GCVARFLG 79
SS + + + +WTSWL+PMFVVANVAVF+VAM++NNCP N++E R CVA+FLG
Sbjct: 39 SSSTEFGDNALSSRWTSWLVPMFVVANVAVFVVAMFVNNCP-NHFESHRLRGHCVAKFLG 97
Query: 80 RLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSL 139
RLSFEPL+ NPLFGPSS TL+KLGALEW +VV + +GWRL+TCIWLHAGVIHL ANMLSL
Sbjct: 98 RLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSL 157
Query: 140 VFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL-LFLFNAVS------LLVLLA-------- 184
VFIGIRLEQQFGFVR+G +YLLSG GG+ LF+ N++S L LL
Sbjct: 158 VFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNSISVGASGALFGLLGSMLSELFT 217
Query: 185 ---------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE 235
AALLTL+ +I INLA+GILPHVDNFAH+GGF+ GFLLGF+LL RPQF W
Sbjct: 218 NWTIYSNKIAALLTLLFVILINLAIGILPHVDNFAHVGGFVTGFLLGFILLARPQFKWLA 277
Query: 236 RHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
R +P ++ ++ YQY+L +++LVLLI GF V L+MLFRGENGNDHC WCHYL CVP
Sbjct: 278 REHMPQGTPLRYKYKTYQYLLWLLSLVLLIAGFVVALLMLFRGENGNDHCRWCHYLRCVP 337
Query: 296 TSKWKCGN 303
TS W+C +
Sbjct: 338 TSSWRCDD 345
>gi|445067421|gb|AGE14563.1| rhomboid [Triticum aestivum]
Length = 323
Score = 332 bits (852), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 175/297 (58%), Positives = 217/297 (73%), Gaps = 27/297 (9%)
Query: 33 SDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCV-ARFLGRLSFEPLKENPL 91
+++W W++P+FV ANVA+F VAMY NNCP + G R CV A FL R +F+PL +NPL
Sbjct: 28 EEREWVPWIVPVFVAANVALFAVAMYANNCPAHA-RGRRKCVGAGFLRRFAFQPLSQNPL 86
Query: 92 FGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
GPSS+TLQKLGAL WD+VVHEHQGWRL+TCIWLHAGV+HLLANMLSLV +G+RLEQQFG
Sbjct: 87 LGPSSATLQKLGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLVGLRLEQQFG 146
Query: 152 FVRVGFVYLLSGFGGAY------------------------YLLFLFNAVSLLVLLAAAL 187
FVRVG +YL+SG GG+ L LF ++ AAAL
Sbjct: 147 FVRVGVIYLVSGVGGSVMSSLFIRDNISVGASGALFGLLGAMLSELFTNWTIYTNKAAAL 206
Query: 188 LTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR-VK 246
+TL+ +IA+NLA+GILPHVDNFAHIGGF+ GFLLGFVLL+RP +GWA+R+ LP+ + V
Sbjct: 207 VTLLFVIAVNLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWAQRYVLPSSVKDVG 266
Query: 247 SRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ YQ+ L VA VL++VG VG+ MLFRG NGN+HC WCHYLSCVPT++W CG
Sbjct: 267 RKFLAYQWALLAVASVLVVVGLAVGMAMLFRGVNGNEHCQWCHYLSCVPTARWSCGK 323
>gi|326532882|dbj|BAJ89286.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 325
Score = 331 bits (849), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 173/299 (57%), Positives = 215/299 (71%), Gaps = 28/299 (9%)
Query: 33 SDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEG--GRGCV-ARFLGRLSFEPLKEN 89
+++W W++P+FV ANVA+F VAMY NNCP + G GR CV A L R +FEPL +N
Sbjct: 27 EEREWVPWIVPVFVAANVALFAVAMYANNCPAHARGGRSGRRCVGAGLLRRFAFEPLSQN 86
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
PL GPSS+TLQKLGAL W++VVHE QGWRL+TCIWLHAGV+HLLANMLSLV +G+RLEQQ
Sbjct: 87 PLLGPSSATLQKLGALVWEKVVHEQQGWRLVTCIWLHAGVVHLLANMLSLVLVGLRLEQQ 146
Query: 150 FGFVRVGFVYLLSGFGGAY------------------------YLLFLFNAVSLLVLLAA 185
FGFVRVG +YL+SG GG+ L LF ++ AA
Sbjct: 147 FGFVRVGVIYLVSGVGGSVMSSLFIRDNISVGASGALFGLLGAMLSELFTNWTIYTNKAA 206
Query: 186 ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR- 244
AL+TL+ +IA+NLA+GILPHVDNFAHIGGF+ GFLLGFVLL+RP +GWA+R+ LP+ +
Sbjct: 207 ALVTLLFVIAVNLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWAQRYVLPSSVKD 266
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
V + YQ+ L A VL++VG VG+ MLFRG NGN+HC WCHYLSCVPT++W CG
Sbjct: 267 VGRKFLAYQWALLAAASVLVVVGLAVGMAMLFRGVNGNEHCQWCHYLSCVPTARWSCGK 325
>gi|357155676|ref|XP_003577199.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 383
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 167/296 (56%), Positives = 212/296 (71%), Gaps = 30/296 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++WT W++P VA VA F+V M++N+CP+ G C A FLGR +F+PL+ENPL GP
Sbjct: 45 RRWTPWVVPAASVACVAAFLVTMFVNDCPR---RGVGDCSASFLGRFAFQPLRENPLLGP 101
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS+TL K+GAL+ ++V QGWRLITCIWLHAGV+HLL N+L L+FIGIRLEQ+FGFVR
Sbjct: 102 SSATLLKMGALDVSKIVQGRQGWRLITCIWLHAGVVHLLINVLCLLFIGIRLEQEFGFVR 161
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAV-----------------------SLLVLLAAALLTL 190
+G VYL+SGFGG+ LF+ +++ SL AALLTL
Sbjct: 162 IGLVYLISGFGGSLMSALFIRSSISVGASGALFGLIGSMLSELITNWSLYANKVAALLTL 221
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQL-PAQ--ARVKS 247
V +I +NLA+GILP VDNFAHIGG ++GFLLGFV+ +RPQF W + ++ P Q A VK
Sbjct: 222 VFVIVVNLALGILPRVDNFAHIGGLISGFLLGFVVFIRPQFAWINQKRVAPGQETAPVKR 281
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+H YQY+L + A+VLLIVGFTV +V+LFRG N NDHCSWCHYLSCVPT KWKC +
Sbjct: 282 KHKTYQYILWLAAVVLLIVGFTVAIVLLFRGYNANDHCSWCHYLSCVPTKKWKCNS 337
>gi|9502383|gb|AAF88090.1|AC025417_18 T12C24.28 [Arabidopsis thaliana]
Length = 302
Score = 331 bits (848), Expect = 3e-88, Method: Compositional matrix adjust.
Identities = 165/293 (56%), Positives = 204/293 (69%), Gaps = 25/293 (8%)
Query: 34 DQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFG 93
D QWT+WL P VVANV++FIV MY N+CPK CVA+ L R SF+PL+ENP G
Sbjct: 10 DTQWTAWLTPTIVVANVSIFIVVMYTNDCPKTTTGANGDCVAKLLRRFSFQPLRENPFLG 69
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
PSSSTL+KLGAL+W +VV ++ WRLIT +WLHAG+IHL+ NM ++ GIRLEQQFGF+
Sbjct: 70 PSSSTLEKLGALDWKKVVQGNEKWRLITAMWLHAGIIHLVMNMFDVIIFGIRLEQQFGFI 129
Query: 154 RVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLAA-----------------ALLT 189
R+G +YL+SGFGG+ LFL ++S LL L+ A ALL+
Sbjct: 130 RIGLIYLISGFGGSILSALFLQKSISVGASGALLGLMGAMLSELLTNWTIYKSKLCALLS 189
Query: 190 LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE-RHQLPAQARVKSR 248
+ IIAINLA+G+LP VDNFAHIGG + GF LGF+LL++PQ GW E R+ AR +S+
Sbjct: 190 FLFIIAINLAIGLLPWVDNFAHIGGLLTGFCLGFILLMQPQSGWEEFRNSSQYGARARSK 249
Query: 249 HNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+NP QYVL VA VL++ G TVGLVMLF GENGN HC WCH L C PTSKW C
Sbjct: 250 YNPCQYVLFFVAAVLVVAGLTVGLVMLFDGENGNKHCKWCHRLDCYPTSKWSC 302
>gi|226494811|ref|NP_001140268.1| uncharacterized protein LOC100272312 [Zea mays]
gi|194698764|gb|ACF83466.1| unknown [Zea mays]
gi|195610418|gb|ACG27039.1| membrane protein [Zea mays]
gi|413919340|gb|AFW59272.1| membrane protein [Zea mays]
Length = 340
Score = 330 bits (845), Expect = 7e-88, Method: Compositional matrix adjust.
Identities = 178/319 (55%), Positives = 225/319 (70%), Gaps = 37/319 (11%)
Query: 14 NNNNNRGSYSSGS-YYVEPGS---DQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEG 69
NN + G Y+ S +Y +P + W SWL+P+ V+ANV +F++ M+ NNCP++
Sbjct: 30 NNMTSNGPYTPPSPFYYDPAAAHGRHHW-SWLVPLVVIANVLMFVLVMFYNNCPRS---- 84
Query: 70 GRGCVAR-FLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAG 128
G CV R FL R SF+PLKENPL GP+++TLQ+ GAL+W +VVH +Q WRL +C WLHAG
Sbjct: 85 GGDCVGRGFLRRFSFQPLKENPLLGPTAATLQRYGALDWYKVVHGNQAWRLESCTWLHAG 144
Query: 129 VIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFN-------AVSLLV 181
+IHLLANM+SL+FIG+RLEQQFGF +VG VYL+SGFGG+ +F + +L
Sbjct: 145 LIHLLANMISLIFIGVRLEQQFGFWKVGLVYLVSGFGGSVLSVFFIRKGVSVGASGALFG 204
Query: 182 LLA-----------------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
LL AA+L L++I AINLA+GILPHVDNFAHIGGF GFLLGFV
Sbjct: 205 LLGAMLSELITNWSIYTNRFAAMLNLIIIAAINLALGILPHVDNFAHIGGFATGFLLGFV 264
Query: 225 LLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDH 284
LL++PQFGW E+ P A+ KS++ YQ +L + ALVLL GF VGLVM+FRGENGNDH
Sbjct: 265 LLIQPQFGWLEQ---PFGAKTKSKYKAYQIILLLAALVLLAAGFAVGLVMVFRGENGNDH 321
Query: 285 CSWCHYLSCVPTSKWKCGN 303
CSWCHYL+CVPTS WKC N
Sbjct: 322 CSWCHYLTCVPTSSWKCDN 340
>gi|357454153|ref|XP_003597357.1| Rhomboid family protein AtRBL1 [Medicago truncatula]
gi|355486405|gb|AES67608.1| Rhomboid family protein AtRBL1 [Medicago truncatula]
Length = 383
Score = 327 bits (839), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 175/295 (59%), Positives = 218/295 (73%), Gaps = 30/295 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
+QW WLIP FV ANV VFI MY+N+CP+N + G CVA FLGR SF+PLKENPLFGP
Sbjct: 42 KQWVPWLIPTFVFANVVVFIFTMYVNDCPENAFHGT--CVAPFLGRFSFQPLKENPLFGP 99
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS TLQK+GALE D+VVHEH+GWRL++CIWLH G IH+LANMLSL+FIGIRLEQ+FGFVR
Sbjct: 100 SSFTLQKMGALEVDKVVHEHEGWRLVSCIWLHGGAIHVLANMLSLLFIGIRLEQEFGFVR 159
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTL 190
+GF+Y++SGFGG+ LF+ +S L LL AALLTL
Sbjct: 160 IGFLYVISGFGGSLLSSLFIQTGISVGASGALFGLLGGMLSELFINWTIYANKMAALLTL 219
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV----K 246
++I+ INLAVG+LPHVDNFAH+GGF +GF LGFV+L+RPQF W + Q + + +
Sbjct: 220 IIIVVINLAVGVLPHVDNFAHLGGFGSGFFLGFVVLIRPQFKWISQQQSKSGSHAFSVKQ 279
Query: 247 SRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+++ PYQYVL +++ +LLI GF G+V+LFRG N N+ CSWCHYLSCVPTSKW C
Sbjct: 280 NKYLPYQYVLWVLSFLLLIAGFIAGMVLLFRGVNLNERCSWCHYLSCVPTSKWSC 334
>gi|147810722|emb|CAN71797.1| hypothetical protein VITISV_026278 [Vitis vinifera]
Length = 754
Score = 327 bits (837), Expect = 5e-87, Method: Compositional matrix adjust.
Identities = 177/300 (59%), Positives = 213/300 (71%), Gaps = 30/300 (10%)
Query: 28 YVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLK 87
Y E ++W WLIP FVVAN+ +F + MY+NNCPKN+ C+A FLGR SF+P K
Sbjct: 45 YREIKHFKKWVPWLIPSFVVANIIMFGITMYVNNCPKNSI----SCIADFLGRFSFQPFK 100
Query: 88 ENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
ENPL GPSSSTLQK+GAL+ RVV HQGWRLITCIWLH GV HLLANMLSL+ IGIRLE
Sbjct: 101 ENPLLGPSSSTLQKMGALDVSRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLE 160
Query: 148 QQFGFVRVGFVYLLSGFGGAYYL-LFLFNAVS------LLVLLA---------------- 184
Q+FGFV+VG +Y++SGFGG+ LF+ +S L LL
Sbjct: 161 QEFGFVKVGLLYVISGFGGSLLSGLFIQENISVGASGALFGLLGGMLSELITNWSIYANK 220
Query: 185 -AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER-HQLPAQ 242
AA LTLV+IIAINLAVGILPHVDNFAHIGGF++GFLLGFV L+RPQFGW + + P
Sbjct: 221 LAAFLTLVIIIAINLAVGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQIYASPEH 280
Query: 243 ARV-KSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ K + YQ +L + +++LLI+G T+GLVML RG + ND CSWCHYLSCVPTSKW C
Sbjct: 281 STSPKPKFKTYQCILWVASVILLIIGLTLGLVMLLRGVDANDRCSWCHYLSCVPTSKWSC 340
>gi|225426830|ref|XP_002283280.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
Length = 281
Score = 326 bits (835), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 189/306 (61%), Positives = 219/306 (71%), Gaps = 28/306 (9%)
Query: 1 MASGDLERG---KNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAM 57
MA+ DLERG KN NN + G YSS +YY E S+ WTSWLIPMFVVANVAVF+V M
Sbjct: 1 MANEDLERGGGMKNRGNNGHPPGYYSS-TYYAE-ASETHWTSWLIPMFVVANVAVFVVVM 58
Query: 58 YINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGW 117
Y+N+CPK N CVA+FL RLSF+PL+ENPLFGPSSSTL+KLG LEW++VV+ QGW
Sbjct: 59 YVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFGPSSSTLEKLGGLEWNKVVYGDQGW 118
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAV 177
RL+TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR+G +YL+SGFGG+ L LF
Sbjct: 119 RLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGS-ILSSLFIQH 177
Query: 178 SLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERH 237
++ V + AL L+ G M L+ + +FGW +R
Sbjct: 178 NISVGASGALFGLL----------------------GAMLSELITNWSIYTNKFGWVKRQ 215
Query: 238 QLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
PA ARVKS+H YQY +VA+ LLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS
Sbjct: 216 HRPADARVKSKHKVYQYAFWLVAMALLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 275
Query: 298 KWKCGN 303
KWKC N
Sbjct: 276 KWKCDN 281
>gi|242042499|ref|XP_002468644.1| hypothetical protein SORBIDRAFT_01g049520 [Sorghum bicolor]
gi|241922498|gb|EER95642.1| hypothetical protein SORBIDRAFT_01g049520 [Sorghum bicolor]
Length = 326
Score = 325 bits (832), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 168/326 (51%), Positives = 225/326 (69%), Gaps = 30/326 (9%)
Query: 4 GDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCP 63
D+E+G + S Y + +++W W++P+F VAN+ VF++ MY+NNCP
Sbjct: 5 ADVEKGGVVRKEPGKVPS----PLYPQHEGEREWVPWIVPVFFVANITVFVITMYVNNCP 60
Query: 64 KNNWEGGRG-CVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITC 122
+ CVARFLGR SF+PL++NPL GPSS+TL K+GAL W++VVH HQGWRL++
Sbjct: 61 THTTTPRDAKCVARFLGRFSFQPLRQNPLLGPSSATLTKMGALVWEKVVHHHQGWRLLSS 120
Query: 123 IWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS--- 178
+WLHAGV+HL+ANML L+F+G+RLEQQFG+VR+G +Y+LSG GGA LF+ N +S
Sbjct: 121 MWLHAGVLHLVANMLCLLFVGMRLEQQFGYVRIGAIYILSGLGGAVLSSLFIRNHISVGA 180
Query: 179 ---LLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAG 218
L LL A A+ TL+ + A+NL +GILPHV+NFAHIGGF+AG
Sbjct: 181 SGALFGLLGAMLSELITNWTIYTNKAVAVATLLFVAAVNLVLGILPHVNNFAHIGGFLAG 240
Query: 219 FLLGFVLLLRPQFGWAERHQLPAQARVKSR-HNPYQYVLCIVALVLLIVGFTVGLVMLFR 277
FLLG V+L+RP FGW ER+ +PA A +R + YQ++L VAL+LL+VGF VG+ M+FR
Sbjct: 241 FLLGLVVLMRPHFGWMERYSMPAGAPCTARKYLAYQWILLAVALLLLVVGFAVGMAMVFR 300
Query: 278 GENGNDHCSWCHYLSCVPTSKWKCGN 303
G N ND C WCHYLSCVPT++W C N
Sbjct: 301 GSNANDSCHWCHYLSCVPTARWNCTN 326
>gi|225440378|ref|XP_002270642.1| PREDICTED: inactive rhomboid protein 1 [Vitis vinifera]
Length = 388
Score = 323 bits (827), Expect = 8e-86, Method: Compositional matrix adjust.
Identities = 177/300 (59%), Positives = 213/300 (71%), Gaps = 30/300 (10%)
Query: 28 YVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLK 87
Y E ++W WLIP FVVAN+ +F + MY+NNCPKN+ C+A FLGR SF+P K
Sbjct: 45 YREIKHFKKWVPWLIPSFVVANIIMFGITMYVNNCPKNSIS----CIADFLGRFSFQPFK 100
Query: 88 ENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
ENPL GPSSSTLQK+GAL+ RVV HQGWRLITCIWLH GV HLLANMLSL+ IGIRLE
Sbjct: 101 ENPLLGPSSSTLQKMGALDVSRVVDRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLE 160
Query: 148 QQFGFVRVGFVYLLSGFGGAYYL-LFLFNAVS------LLVLLA---------------- 184
Q+FGFV+VG +Y++SGFGG+ LF+ +S L LL
Sbjct: 161 QEFGFVKVGLLYVISGFGGSLLSGLFIQENISVGASGALFGLLGGMLSELITNWSIYANK 220
Query: 185 -AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER-HQLPAQ 242
AA LTLV+IIAINLAVGILPHVDNFAHIGGF++GFLLGFV L+RPQFGW + + P
Sbjct: 221 LAAFLTLVIIIAINLAVGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQIYASPEH 280
Query: 243 ARV-KSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ K + YQ +L + +++LLI+G T+GLVML RG + ND CSWCHYLSCVPTSKW C
Sbjct: 281 STSPKPKFKTYQCILWVASVILLIIGLTLGLVMLLRGVDANDRCSWCHYLSCVPTSKWSC 340
>gi|242079729|ref|XP_002444633.1| hypothetical protein SORBIDRAFT_07g025140 [Sorghum bicolor]
gi|241940983|gb|EES14128.1| hypothetical protein SORBIDRAFT_07g025140 [Sorghum bicolor]
Length = 332
Score = 321 bits (823), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 174/301 (57%), Positives = 220/301 (73%), Gaps = 31/301 (10%)
Query: 33 SDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRG----CVAR-FLGRLSFEPLK 87
+++W WL+P +VA +AVF M++N+CP++ G G CVA L R SF+PL+
Sbjct: 33 EERRWWPWLVPTVLVACIAVFAAEMFVNDCPRHGSALGGGAGSGCVAAGLLRRFSFQPLR 92
Query: 88 ENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
ENPLFGPSS+TL+K+GAL W +VVHEHQGWRLI+CIWLHAG++HL+ NMLSL+FIGIRLE
Sbjct: 93 ENPLFGPSSATLEKMGALNWAKVVHEHQGWRLISCIWLHAGLVHLVVNMLSLLFIGIRLE 152
Query: 148 QQFGFVRVGFVYLLSGFGGAYY-LLFLF-----------------NAVSLLVL------- 182
QQFGFVR+G +YL+SGFGG+ LFL + +S L++
Sbjct: 153 QQFGFVRIGVIYLISGFGGSVLSALFLHSNYISVGASGALFGLLGSMLSELIMNWTIYSN 212
Query: 183 LAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQ 242
AAA++TL+ IIAINLA+GILPH DNFAHIGGF +GFLLGFVLL RPQFGW ER +LP Q
Sbjct: 213 KAAAIITLLFIIAINLAIGILPHADNFAHIGGFASGFLLGFVLLARPQFGWMERSELP-Q 271
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCG 302
++ YQYVL + AL+LL+VGF + LVMLF+G+NGND C WCHYL+CVPTS+WKC
Sbjct: 272 TNQPPKYKLYQYVLWVAALLLLVVGFVIILVMLFKGKNGNDSCHWCHYLNCVPTSRWKCD 331
Query: 303 N 303
Sbjct: 332 T 332
>gi|449483645|ref|XP_004156648.1| PREDICTED: uncharacterized protein LOC101224387 [Cucumis sativus]
Length = 471
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 173/296 (58%), Positives = 216/296 (72%), Gaps = 31/296 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W WLIP FV+AN+ F + M +NNCPKN+ C+ARFLGR SF+ LKENPL GP
Sbjct: 134 RKWIPWLIPSFVIANIVTFFITMSVNNCPKNSVS----CIARFLGRFSFQSLKENPLLGP 189
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS TL+++GALE ++VVH +Q WRLITCIWLHAGV HLLANMLSL+ IGIRLEQ+FGF+R
Sbjct: 190 SSLTLRRMGALEVNKVVHGNQLWRLITCIWLHAGVFHLLANMLSLLVIGIRLEQEFGFIR 249
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTL 190
+G +Y++SGFGG+ LF+ + +S L LL AAL+TL
Sbjct: 250 IGLLYVISGFGGSLLSSLFIQSNISVGASGALFGLLGGMLSELITNWTIYSNKVAALVTL 309
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW-AERHQLPAQARVKSRH 249
+VIIAINLAVGILPHVDNFAHIGGF++GFLLGFV L+RPQFGW ++R+ + + H
Sbjct: 310 LVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVSQRYTSQTNSSFGANH 369
Query: 250 --NPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
YQ VL I++L+LLI GFTVG+V+L RG + N HCSWCHYLSCVPTSKW C +
Sbjct: 370 KFKIYQCVLWIISLILLIAGFTVGMVLLSRGFDANRHCSWCHYLSCVPTSKWSCNS 425
>gi|224090695|ref|XP_002309063.1| predicted protein [Populus trichocarpa]
gi|222855039|gb|EEE92586.1| predicted protein [Populus trichocarpa]
Length = 367
Score = 321 bits (822), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 172/294 (58%), Positives = 211/294 (71%), Gaps = 31/294 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W WLIP FV+ANV +FI+ MY+NNCPKN C+ARFLGR SF+P KENPL GP
Sbjct: 30 KKWWPWLIPAFVIANVVMFIITMYVNNCPKNY----VSCIARFLGRFSFQPFKENPLLGP 85
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS +LQK+GAL+ +VV HQ WRLITC WLH GV HLLANMLSL+ IGIRLEQ+FGFV+
Sbjct: 86 SSISLQKMGALDVQKVVDGHQWWRLITCNWLHGGVFHLLANMLSLLVIGIRLEQEFGFVK 145
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTL 190
VG +Y++SGFGG+ LF+ + +S L LL AA +TL
Sbjct: 146 VGLLYVISGFGGSLLSALFIQSNISVGASGALFGLLGSMLSELITNWTIYANQVAAFITL 205
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARVKS 247
VVIIA+NLA+GILPHVDNFAHIGGF++GFLLGFV L+RPQFGW + + P A VKS
Sbjct: 206 VVIIAVNLALGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWFSQRRAPLGYIPASVKS 265
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ YQ L I++L+LLI G T+G+V+L RG + N+HCSWCHYLSCVPT KW C
Sbjct: 266 KFKTYQCALWIISLILLIAGLTIGMVLLLRGVDANEHCSWCHYLSCVPTGKWSC 319
>gi|297746062|emb|CBI16118.3| unnamed protein product [Vitis vinifera]
Length = 316
Score = 320 bits (820), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 168/272 (61%), Positives = 201/272 (73%), Gaps = 31/272 (11%)
Query: 57 MYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQG 116
M+INNCPKN+ CVA FLGR SF+PLKENPL GPSSSTL+K+GALE +VVH HQ
Sbjct: 1 MFINNCPKNS----VSCVADFLGRFSFQPLKENPLLGPSSSTLEKMGALEVSKVVHRHQV 56
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFN 175
WRLI+CIWLHAGV H+LANMLSLVFIGIRLEQ+FGFVR+G +Y++SGFGG+ LF+ +
Sbjct: 57 WRLISCIWLHAGVFHVLANMLSLVFIGIRLEQEFGFVRIGLLYVVSGFGGSMLSSLFIQS 116
Query: 176 AVS------LLVLLAAALLTLVV-----------------IIAINLAVGILPHVDNFAHI 212
++S L LL L L+ II +NLAVGILPHVDNFAHI
Sbjct: 117 SISVGASGALFGLLGGMLSELITNWTIYANKFAALLTLILIIIVNLAVGILPHVDNFAHI 176
Query: 213 GGFMAGFLLGFVLLLRPQFGW-AERHQLPAQ--ARVKSRHNPYQYVLCIVALVLLIVGFT 269
GGF++GFLLGFV L+RPQFGW ++R+ P VK +H YQYVL +++L+LL VGFT
Sbjct: 177 GGFVSGFLLGFVFLIRPQFGWVSQRNASPGHIAPSVKPKHKMYQYVLWVMSLILLTVGFT 236
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
VG+VML RG +GND CSWCHYLSCVPTSKW C
Sbjct: 237 VGMVMLLRGVSGNDQCSWCHYLSCVPTSKWSC 268
>gi|449440331|ref|XP_004137938.1| PREDICTED: uncharacterized protein LOC101206123 [Cucumis sativus]
Length = 397
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 173/296 (58%), Positives = 216/296 (72%), Gaps = 31/296 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W WLIP FV+AN+ F + M +NNCPKN+ C+ARFLGR SF+ LKENPL GP
Sbjct: 60 RKWIPWLIPSFVIANIVTFFITMSVNNCPKNSVS----CIARFLGRFSFQSLKENPLLGP 115
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS TL+++GALE ++VVH +Q WRLITCIWLHAGV HLLANMLSL+ IGIRLEQ+FGF+R
Sbjct: 116 SSLTLRRMGALEVNKVVHGNQLWRLITCIWLHAGVFHLLANMLSLLVIGIRLEQEFGFIR 175
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTL 190
+G +Y++SGFGG+ LF+ + +S L LL AAL+TL
Sbjct: 176 IGLLYVISGFGGSLLSSLFIQSNISVGASGALFGLLGGMLSELITNWTIYSNKVAALVTL 235
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW-AERHQLPAQARVKSRH 249
+VIIAINLAVGILPHVDNFAHIGGF++GFLLGFV L+RPQFGW ++R+ + + H
Sbjct: 236 LVIIAINLAVGILPHVDNFAHIGGFISGFLLGFVFLIRPQFGWVSQRYTSQTNSSFGANH 295
Query: 250 --NPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
YQ VL I++L+LLI GFTVG+V+L RG + N HCSWCHYLSCVPTSKW C +
Sbjct: 296 KFKIYQCVLWIISLILLIAGFTVGMVLLSRGFDANRHCSWCHYLSCVPTSKWSCNS 351
>gi|413925083|gb|AFW65015.1| hypothetical protein ZEAMMB73_264327 [Zea mays]
Length = 322
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 178/317 (56%), Positives = 221/317 (69%), Gaps = 36/317 (11%)
Query: 20 GSYSSGSYYVEPGS-------DQQWTSWLIPMFVVANVAVFIVAMYINNCPKNN---WEG 69
G + YY P S +++W WL+P +VA +AVF M++N+CP++ G
Sbjct: 5 GQGKAAGYYQYPTSYAGAADEERRWWPWLVPTVLVACIAVFAAEMFVNDCPRHGSTLGGG 64
Query: 70 GRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGV 129
A L R SF+PL+ENPLFGPSS+TL+K+GAL W +VVHEHQGWRLI+CIWLHAG+
Sbjct: 65 AGCVAAGLLRRFSFQPLRENPLFGPSSATLEKMGALNWAKVVHEHQGWRLISCIWLHAGL 124
Query: 130 IHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLF-NAVS------LLV 181
+HL+ NMLSL+FIGIRLEQQFGFVR+G +YL+SGFGG+ LFL N VS L
Sbjct: 125 VHLVVNMLSLLFIGIRLEQQFGFVRIGVIYLISGFGGSVLSALFLHSNYVSVGASGALFG 184
Query: 182 LL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
LL AAA++TL+ II INLA+GILPH DNFAHIGGF +GFL+GFV
Sbjct: 185 LLGSMLSELIINWTIYSNKAAAIITLLFIIVINLAIGILPHADNFAHIGGFASGFLIGFV 244
Query: 225 LLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDH 284
LL RPQFGW ER +LP Q ++ YQYVL + AL+LL+VGF + LVMLF G+NGND
Sbjct: 245 LLARPQFGWMERSELP-QTSQPPKYKSYQYVLWVAALLLLVVGFAIILVMLFTGKNGNDS 303
Query: 285 CSWCHYLSCVPTSKWKC 301
C WCHYL+CVPTS+WKC
Sbjct: 304 CHWCHYLNCVPTSRWKC 320
>gi|356566513|ref|XP_003551475.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 385
Score = 319 bits (817), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 163/308 (52%), Positives = 210/308 (68%), Gaps = 31/308 (10%)
Query: 21 SYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGR 80
S++S + E ++W WLIP FV+ANV VFI+ MY+N+C K C+A FLGR
Sbjct: 33 SFTSKVEHREVKHFKEWFPWLIPFFVIANVIVFIITMYVNDCSKTL----ATCIAPFLGR 88
Query: 81 LSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLV 140
SF+P ENPL GPS TL+K+GAL+ ++VVH HQGWRLITC+WLH GV HL+ANM L+
Sbjct: 89 FSFQPFNENPLLGPSLITLRKMGALDANKVVHRHQGWRLITCMWLHGGVFHLVANMFGLL 148
Query: 141 FIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA--------- 184
+GI+LE++FGFV +G ++++SGFGG+ LF+ VS L LL
Sbjct: 149 VVGIQLEKEFGFVLIGLLFVISGFGGSLLSALFIGEKVSVGASGALFGLLGGMLSELLTN 208
Query: 185 --------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
AL T V +IAINLAVG+LPHVDNFAHIGGF++GFLLGFV L+RPQFGW ++
Sbjct: 209 WSLYEKKLGALFTFVFVIAINLAVGVLPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWIKQ 268
Query: 237 HQLP---AQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSC 293
P + +K + N YQ + I+AL+LLIVGFT GL+ L RG + ND+CSWCHYLSC
Sbjct: 269 RNAPQPYSPTLIKPKFNKYQCISWILALILLIVGFTTGLIALLRGIDANDYCSWCHYLSC 328
Query: 294 VPTSKWKC 301
VPTS+W C
Sbjct: 329 VPTSRWNC 336
>gi|357165337|ref|XP_003580349.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 343
Score = 318 bits (815), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 175/349 (50%), Positives = 226/349 (64%), Gaps = 52/349 (14%)
Query: 1 MASGDLERGKNIS--------------NNNNNRGSYSSGSYYVEP-------GSDQQWTS 39
M++GD+E G N + + Y++ V P ++Q +
Sbjct: 1 MSNGDMEAGAPARAATTTGIKPPPGRYNADGHGPQYAAAGAPVSPFYYAAAAAQEKQHRT 60
Query: 40 WLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVAR-FLGRLSFEPLKENPLFGPSSST 98
WL+P+ V+ANVA+FIV MY N+CP++ G CV R L R SF+PLKENPLFGPS++T
Sbjct: 61 WLVPLVVLANVAMFIVVMYYNDCPRS---GNGDCVGRGVLRRFSFQPLKENPLFGPSATT 117
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L K G L+ +VV ++ WRL T WLHAG+IHL ANM+SL+F+G+RLEQQFGF +VG V
Sbjct: 118 LGKYGGLDRYKVVRGNEAWRLETSTWLHAGLIHLGANMISLIFVGVRLEQQFGFWKVGLV 177
Query: 159 YLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTLVVII 194
YL+SG GG+ +LF+ N VS L LL AA+ L++I
Sbjct: 178 YLVSGLGGSILSVLFIRNGVSVGASGALFGLLGAMLSELITNWSIYTNRIAAMANLIIIA 237
Query: 195 AINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQY 254
AINLA+GILPHVDNFAHIGGF GFLLGFVLL++P+FGW E+ P A+ KS++ Q
Sbjct: 238 AINLALGILPHVDNFAHIGGFATGFLLGFVLLIQPRFGWLEQ---PFGAKSKSKYTACQI 294
Query: 255 VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+L +VAL+L I GF VGL+M+FRG NGNDHCSWCHYL+CVPTS WKC N
Sbjct: 295 ILLVVALILSIAGFAVGLLMVFRGVNGNDHCSWCHYLTCVPTSSWKCDN 343
>gi|357148757|ref|XP_003574883.1| PREDICTED: inactive rhomboid protein 1-like [Brachypodium
distachyon]
Length = 321
Score = 318 bits (814), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 179/310 (57%), Positives = 223/310 (71%), Gaps = 30/310 (9%)
Query: 22 YSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRG---CVARFL 78
Y G Y V ++QW WL+P + A V VF V MY N+CP++ G G CVA FL
Sbjct: 14 YQYGPYGVVR-EERQWWPWLVPAVLGACVTVFAVEMYNNDCPRHGSTLGGGDAPCVAGFL 72
Query: 79 GRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLS 138
R +F+PL+ENPL GPSS+TL+KLGAL+W +VVH+HQGWRLI+CIWLHAG+IHL+ NMLS
Sbjct: 73 RRFAFQPLRENPLLGPSSATLEKLGALDWAKVVHQHQGWRLISCIWLHAGLIHLIVNMLS 132
Query: 139 LVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFN-----------------AVSLL 180
L+FIGIRLEQQFGFVR+G +YLLSGFGG+ LFL N +S L
Sbjct: 133 LLFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSALFLRNHYISVGASGALFGLLGSMLSEL 192
Query: 181 VL-------LAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW 233
++ AAA++TL+ II INLA+GILPH DNFAHIGGF++GFL+GFVLL RPQFGW
Sbjct: 193 IMNWTIYSNKAAAIITLLFIIVINLAIGILPHADNFAHIGGFVSGFLIGFVLLARPQFGW 252
Query: 234 AERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSC 293
ER++LP Q ++ YQYVL VAL+LL+VG+ V L +LF+G+NGND C WC YL+C
Sbjct: 253 MERNELP-QTDQPPKYKTYQYVLWGVALLLLLVGYVVTLALLFKGKNGNDGCHWCRYLNC 311
Query: 294 VPTSKWKCGN 303
VPTS+WKCG
Sbjct: 312 VPTSRWKCGT 321
>gi|302776526|ref|XP_002971421.1| hypothetical protein SELMODRAFT_172130 [Selaginella moellendorffii]
gi|300160553|gb|EFJ27170.1| hypothetical protein SELMODRAFT_172130 [Selaginella moellendorffii]
Length = 379
Score = 317 bits (813), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 181/327 (55%), Positives = 224/327 (68%), Gaps = 36/327 (11%)
Query: 5 DLERGKNISNNNNNRGSYS--SGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNC 62
D+ER + S++ R Y + S Y E SWLIP+FVVANV VFIV MY+NNC
Sbjct: 10 DIERKGSFSSHRG-RSVYPVPASSSYEEMPPRASRISWLIPLFVVANVIVFIVTMYVNNC 68
Query: 63 PKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITC 122
PKN++ C FL RLSFE L++NPL GPSS TL+K+GAL VV HQGWRLI+C
Sbjct: 69 PKNSFN----CRLTFLKRLSFESLRDNPLLGPSSETLKKMGALNSTLVVKRHQGWRLISC 124
Query: 123 IWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS--- 178
+WLHAGV+HLLANM+ L+ IGIRLE++FGFV++G +YLLSGFGG+ LF+ + +S
Sbjct: 125 MWLHAGVLHLLANMICLLLIGIRLEREFGFVKIGLLYLLSGFGGSLLSALFIQDRISVGA 184
Query: 179 ---LLVLLA-----------------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAG 218
L LL AAL+TLV+II INLAVGILPHVDNFAHIGGF++G
Sbjct: 185 SGALFGLLGAMVSELITNWSIYSNKIAALITLVIIIGINLAVGILPHVDNFAHIGGFVSG 244
Query: 219 FLLGFVLLLRPQFGWAERHQ----LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVM 274
FLLGFVLL+RPQ GW RHQ +P A VKSRH YQ VL IVA++LL+ G++ + +
Sbjct: 245 FLLGFVLLMRPQLGWV-RHQGHAGMPGGAPVKSRHKIYQIVLLIVAVLLLVAGYSTAIAL 303
Query: 275 LFRGENGNDHCSWCHYLSCVPTSKWKC 301
L++ + N CSWCHYLSCVPTS W C
Sbjct: 304 LYKEVDVNKKCSWCHYLSCVPTSHWNC 330
>gi|356575935|ref|XP_003556091.1| PREDICTED: inactive rhomboid protein 1-like isoform 2 [Glycine max]
Length = 282
Score = 317 bits (812), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 164/300 (54%), Positives = 199/300 (66%), Gaps = 24/300 (8%)
Query: 5 DLERGKN-ISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCP 63
DLE G NN +YS+ S+ WTSWL+PMFVVAN+AVF++ MYINNCP
Sbjct: 4 DLESGGGGTKNNRTAEENYSAPESSHVYDSETHWTSWLVPMFVVANIAVFVITMYINNCP 63
Query: 64 KNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCI 123
+NN CVARFLGR SF+P++ENPL GPSSSTL K+GAL WD VV+ HQGWRL TCI
Sbjct: 64 RNNLRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRHQGWRLFTCI 123
Query: 124 WLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLL 183
WLHAGVIHLLANMLSLVFIGIRLEQQFGF+++G +YL+SGFGG+ L LF + V
Sbjct: 124 WLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGS-VLSSLFIRDHISVGA 182
Query: 184 AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
+ AL L+ G M L+ + +F W E+ +LPA
Sbjct: 183 SGALFGLL----------------------GAMLSELITNWTIYSNKFSWLEQRRLPAGV 220
Query: 244 RVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+KS++ YQYVL IV+L+LLI G + LVMLFRGE G DHC WC YL+CVPTSKW+C N
Sbjct: 221 GMKSKYKAYQYVLWIVSLILLIAGLSTALVMLFRGEKGYDHCHWCRYLTCVPTSKWECSN 280
>gi|242074036|ref|XP_002446954.1| hypothetical protein SORBIDRAFT_06g025770 [Sorghum bicolor]
gi|241938137|gb|EES11282.1| hypothetical protein SORBIDRAFT_06g025770 [Sorghum bicolor]
Length = 340
Score = 316 bits (810), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 181/319 (56%), Positives = 224/319 (70%), Gaps = 41/319 (12%)
Query: 19 RGSYSSGSYYVEPGS---------DQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEG 69
R + +S + YV+P ++ SWL+P+ V+ANVA+F+V M+ NNCP+ G
Sbjct: 29 RYNTTSNAPYVQPSPFYYDHAAAHERHHWSWLVPLVVIANVAMFVVVMFYNNCPR----G 84
Query: 70 GRGCVAR-FLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAG 128
G CV R FL R SF+PLKENPL GP+++TLQK GAL+W +VVH +Q WRL +C WLHAG
Sbjct: 85 GGDCVGRGFLRRFSFQPLKENPLLGPTAATLQKYGALDWYKVVHGNQAWRLESCTWLHAG 144
Query: 129 VIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLV 181
+IHLLANM+SL+FIG+RLEQQFGF RVG VYL+SGFGG+ +LF+ VS L
Sbjct: 145 LIHLLANMISLIFIGVRLEQQFGFWRVGLVYLVSGFGGSVLSVLFIRKGVSVGASGALFG 204
Query: 182 LLA-----------------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
LL AA+L L++I AINLA+GILPHVDNFAHIGGF GFLLGFV
Sbjct: 205 LLGAMLSELITNWSIYTNRFAAMLNLIIIAAINLALGILPHVDNFAHIGGFATGFLLGFV 264
Query: 225 LLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDH 284
LL++PQFGW E+ P ++ KS++ YQ +L I ALVLL G VGLVM+FRGENGNDH
Sbjct: 265 LLIQPQFGWLEQ---PYGSKTKSKYKAYQIILLIAALVLLAAGLAVGLVMVFRGENGNDH 321
Query: 285 CSWCHYLSCVPTSKWKCGN 303
C WCHYL+CVPTS WKC N
Sbjct: 322 CGWCHYLTCVPTSSWKCDN 340
>gi|326519200|dbj|BAJ96599.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 201/297 (67%), Gaps = 32/297 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++WT WL+P +A VAVF+V M++N+CP + C A FLGR +F+PLKENPL GP
Sbjct: 41 RRWTPWLVPAASIACVAVFLVTMFVNDCPNRS---SGNCSAGFLGRFAFQPLKENPLLGP 97
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS+TL K+GAL+ +VV QGWRLITCIWLHAGV+HLL N+L L+FIGIRLEQ+FGFVR
Sbjct: 98 SSTTLLKMGALDVSKVVQGRQGWRLITCIWLHAGVVHLLINVLCLLFIGIRLEQEFGFVR 157
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAV-------------- 200
+G VYL+SGFGG+ + LF S+ V + AL L+ + L
Sbjct: 158 IGLVYLISGFGGS-LMSALFIRASISVGASGALFGLIGSMLSELITNWSLYANKVAALLT 216
Query: 201 -----------GILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQL---PAQARVK 246
GILP VDNFAHIGG ++GFLLGFV+ +RPQF W + ++ P A +
Sbjct: 217 LVLVIVVNLALGILPRVDNFAHIGGLISGFLLGFVVFIRPQFAWINQRRVTPGPQTAPAE 276
Query: 247 SRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+H YQY+L IVA +LLI+GFTV +VMLFRG N NDHCSWCHYLSCVPT KWKC +
Sbjct: 277 RKHKTYQYILWIVAAILLIIGFTVAIVMLFRGYNANDHCSWCHYLSCVPTKKWKCNS 333
>gi|326528413|dbj|BAJ93395.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 379
Score = 314 bits (804), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 160/297 (53%), Positives = 201/297 (67%), Gaps = 32/297 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++WT WL+P +A VAVF+V M++N+CP + C A FLGR +F+PLKENPL GP
Sbjct: 41 RRWTPWLVPAASIACVAVFLVTMFVNDCPNRS---SGNCSAGFLGRFAFQPLKENPLLGP 97
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS+TL K+GAL+ +VV QGWRLITCIWLHAGV+HLL N+L L+FIGIRLEQ+FGFVR
Sbjct: 98 SSTTLLKMGALDVSKVVQGRQGWRLITCIWLHAGVVHLLINVLCLLFIGIRLEQEFGFVR 157
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAV-------------- 200
+G VYL+SGFGG+ + LF S+ V + AL L+ + L
Sbjct: 158 IGLVYLISGFGGS-LMSALFIRASISVGASGALFGLIGSMLSELITNWSLYANKVAALLT 216
Query: 201 -----------GILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQL---PAQARVK 246
GILP VDNFAHIGG ++GFLLGFV+ +RPQF W + ++ P A +
Sbjct: 217 LVLVIVVNLALGILPRVDNFAHIGGLISGFLLGFVVFIRPQFAWINQRRVTPGPQTAPAE 276
Query: 247 SRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+H YQY+L IVA +LLI+GFTV +VMLFRG N NDHCSWCHYLSCVPT KWKC +
Sbjct: 277 RKHKTYQYILWIVAAILLIIGFTVAIVMLFRGYNANDHCSWCHYLSCVPTEKWKCNS 333
>gi|116310009|emb|CAH67035.1| OSIGBa0139P06.8 [Oryza sativa Indica Group]
gi|218195395|gb|EEC77822.1| hypothetical protein OsI_17028 [Oryza sativa Indica Group]
Length = 342
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/303 (53%), Positives = 209/303 (68%), Gaps = 35/303 (11%)
Query: 27 YYVEPGSDQQW--TSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVAR-FLGRLSF 83
YY + + Q+ +W++P+ V+ANVA+F+V MY NNCP N G R CV R FL RLSF
Sbjct: 45 YYYDQAAAQERHHRTWVVPLVVIANVAMFVVVMYYNNCPANG--GRRDCVGRSFLRRLSF 102
Query: 84 EPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIG 143
+PL+ENP+ GPS++TL+K GAL+W VVH +Q WRL T WLHAG+IHL ANM+SL+ IG
Sbjct: 103 QPLRENPVLGPSAATLRKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLLIG 162
Query: 144 IRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLV--------LLA----------- 184
IRLEQQFGF +VG VYL+SGFGG+ + + + V LL
Sbjct: 163 IRLEQQFGFWKVGLVYLVSGFGGSVLSVLFISRNGITVGASGALFGLLGAMLSELITNWT 222
Query: 185 ------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
AA++ L++I AINLA+GILP VDNFAHIGGF GFLLGFVLL++PQFGW+E+
Sbjct: 223 IYSNRCAAMVNLIIIAAINLALGILPRVDNFAHIGGFATGFLLGFVLLIQPQFGWSEQ-- 280
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
+ KS++N +Q +L +++ LLI GF GLV +F+G +GN HCSWCHYL+CVPTS
Sbjct: 281 ---VSSAKSKYNAFQIILLTLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSS 337
Query: 299 WKC 301
WKC
Sbjct: 338 WKC 340
>gi|302765296|ref|XP_002966069.1| hypothetical protein SELMODRAFT_84059 [Selaginella moellendorffii]
gi|300166883|gb|EFJ33489.1| hypothetical protein SELMODRAFT_84059 [Selaginella moellendorffii]
Length = 335
Score = 311 bits (798), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 172/291 (59%), Positives = 211/291 (72%), Gaps = 33/291 (11%)
Query: 39 SWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSST 98
SWLIP+FVVANV VFIV MY+NNCPKN++ C FL RLSFE L++NPL GPSS T
Sbjct: 9 SWLIPLFVVANVIVFIVTMYVNNCPKNSFN----CRLTFLKRLSFESLRDNPLLGPSSET 64
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L+K+GAL VV +HQGWRLI+C+WLHAGV+HLLANM+ L+ IGIRLE++FGFV++G +
Sbjct: 65 LKKMGALNSTLVVKKHQGWRLISCMWLHAGVLHLLANMICLLLIGIRLEREFGFVKIGLL 124
Query: 159 YLLSGFGGAYY-LLFLFNAVS------LLVLLA-----------------AALLTLVVII 194
YLLSGFGG+ LF+ + +S L LL AAL+TLV+II
Sbjct: 125 YLLSGFGGSLLSALFIQDRISVGASGALFGLLGAMVSELITNWSIYSNKIAALITLVIII 184
Query: 195 AINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ----LPAQARVKSRHN 250
INLAVGILPHVDNFAHIGGF++GFLLGFVLL+RPQ GW RHQ +P A VKSRH
Sbjct: 185 GINLAVGILPHVDNFAHIGGFVSGFLLGFVLLMRPQLGWV-RHQGHAGMPGGAPVKSRHK 243
Query: 251 PYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
YQ VL IVA++LL+ G++ + +L++ + N CSWCHYLSCVPTS W C
Sbjct: 244 IYQIVLLIVAVLLLVAGYSTAIALLYKEVDVNKKCSWCHYLSCVPTSHWNC 294
>gi|115459992|ref|NP_001053596.1| Os04g0569300 [Oryza sativa Japonica Group]
gi|38344377|emb|CAE02252.2| OSJNBb0032E06.11 [Oryza sativa Japonica Group]
gi|113565167|dbj|BAF15510.1| Os04g0569300 [Oryza sativa Japonica Group]
gi|215704480|dbj|BAG93914.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 342
Score = 311 bits (797), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 161/303 (53%), Positives = 209/303 (68%), Gaps = 35/303 (11%)
Query: 27 YYVEPGSDQQW--TSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVAR-FLGRLSF 83
YY + + Q+ +W++P+ V+ANVA+F+V MY NNCP N G R CV R FL RLSF
Sbjct: 45 YYYDQAAAQERHHRTWVVPLVVIANVAMFVVVMYYNNCPANG--GRRDCVGRSFLRRLSF 102
Query: 84 EPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIG 143
+PL+ENP+ GPS++TL+K GAL+W VVH +Q WRL T WLHAG+IHL ANM+SL+ IG
Sbjct: 103 QPLRENPVLGPSAATLRKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIG 162
Query: 144 IRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLV--------LLA----------- 184
IRLEQQFGF +VG VYL+SGFGG+ + + + V LL
Sbjct: 163 IRLEQQFGFWKVGLVYLVSGFGGSVLSVLFISRNGITVGASGALFGLLGAMLSELITNWT 222
Query: 185 ------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
AA++ L++I AINLA+GILP VDNFAHIGGF GFLLGFVLL++PQFGW+E+
Sbjct: 223 IYSNRCAAMVNLIIIAAINLALGILPRVDNFAHIGGFATGFLLGFVLLIQPQFGWSEQ-- 280
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
+ KS++N +Q +L +++ LLI GF GLV +F+G +GN HCSWCHYL+CVPTS
Sbjct: 281 ---VSSAKSKYNAFQIILLTLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSS 337
Query: 299 WKC 301
WKC
Sbjct: 338 WKC 340
>gi|115483002|ref|NP_001065094.1| Os10g0521900 [Oryza sativa Japonica Group]
gi|113639703|dbj|BAF27008.1| Os10g0521900, partial [Oryza sativa Japonica Group]
Length = 338
Score = 311 bits (796), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 153/252 (60%), Positives = 191/252 (75%), Gaps = 25/252 (9%)
Query: 77 FLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANM 136
FL R SF+PL ENPL GPSS+TLQK+GAL WD+VVHEHQGWRL+TCIWLHAGV+HLLANM
Sbjct: 87 FLRRFSFQPLSENPLLGPSSATLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANM 146
Query: 137 LSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLL------ 183
LSLV IG+RLEQQFG++R+G +YL+SG GG+ LF+ N++S L LL
Sbjct: 147 LSLVLIGLRLEQQFGYMRIGIIYLVSGIGGSVLSSLFIRNSISVGASGALFGLLGAMLSE 206
Query: 184 -----------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
AAAL+TL+++IAINLA+GILPHVDNFAHIGGF+ GFLLGF+ L+RP +G
Sbjct: 207 LFTNWTIYTNKAAALVTLLIVIAINLAIGILPHVDNFAHIGGFLTGFLLGFIFLMRPHYG 266
Query: 233 WAERHQLPAQARVKS-RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYL 291
W +R+ LP+ + S ++ YQ++L VA VL ++GF VGL MLFRG N N+ C WCHYL
Sbjct: 267 WMQRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCHWCHYL 326
Query: 292 SCVPTSKWKCGN 303
SC+PTS+W CGN
Sbjct: 327 SCIPTSRWTCGN 338
>gi|414876345|tpg|DAA53476.1| TPA: hypothetical protein ZEAMMB73_598699 [Zea mays]
Length = 663
Score = 310 bits (795), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 156/306 (50%), Positives = 211/306 (68%), Gaps = 41/306 (13%)
Query: 37 WTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGG-------------RGC-VARFLGRLS 82
W +L+P+F+VAN+ +F++ MY+N+CP + G +GC +A LGR +
Sbjct: 60 WFPFLVPLFIVANIVLFVLTMYVNDCPAHARATGAAIGGSVGESATAQGCWLAPELGRFA 119
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
F+ KENPL GPSS+TL ++GALE +V +H+GWRLITCIWLHAGV+H+LANMLSL+ I
Sbjct: 120 FQSFKENPLIGPSSATLLEMGALETSKVTKDHEGWRLITCIWLHAGVVHILANMLSLLMI 179
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGA-YYLLFLFNAVS------LLVLLA----------- 184
GIRLE++FGF+R+G +Y++SG GG+ LF+ + +S L LL
Sbjct: 180 GIRLEKEFGFIRIGTLYVISGVGGSLLSSLFMVSNISVGASGALFGLLGSMLSELITNWT 239
Query: 185 ------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
AALLTLV+II INLAVGILPHVDNFAH+GGFM+GF LGFVLL+RPQFG+ +
Sbjct: 240 IYENKFAALLTLVMIILINLAVGILPHVDNFAHLGGFMSGFCLGFVLLMRPQFGYINQKN 299
Query: 239 LP---AQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
P K + YQ +L +++ ++L+ GFT+GLV+LF+G N ++HCSWCHY+SCVP
Sbjct: 300 SPLGFPMGVTKRKFKTYQVILLVISTMILVSGFTIGLVLLFQGFNASEHCSWCHYMSCVP 359
Query: 296 TSKWKC 301
TSKW C
Sbjct: 360 TSKWSC 365
>gi|225455418|ref|XP_002279126.1| PREDICTED: inactive rhomboid protein 1 isoform 2 [Vitis vinifera]
Length = 278
Score = 309 bits (791), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 180/301 (59%), Positives = 210/301 (69%), Gaps = 33/301 (10%)
Query: 3 SGDLE-RGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINN 61
S DLE RG N GSY+S S V S+ QWTSWL+PMFVVANVAVF+VAMYINN
Sbjct: 4 SEDLESRGAK-----NRGGSYTSSS--VIEDSETQWTSWLVPMFVVANVAVFVVAMYINN 56
Query: 62 CPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLIT 121
CPK N CVA FLGR SF+PLKENPLFGPSS TL+KLGALEW +VV +HQGWRL+T
Sbjct: 57 CPKENSRVQGKCVAGFLGRFSFQPLKENPLFGPSSKTLEKLGALEWKKVVSKHQGWRLVT 116
Query: 122 CIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVSLL 180
CIWLHAG+IHLL NMLSLV IGIRLEQQFGFVR+G +YLLSGFGG+ LF+ N++S
Sbjct: 117 CIWLHAGIIHLLVNMLSLVLIGIRLEQQFGFVRIGVIYLLSGFGGSVLSSLFIQNSIS-- 174
Query: 181 VLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP 240
V + AL L+ G M L+ + +FGW E LP
Sbjct: 175 VGASGALFGLL----------------------GAMLSELITNWSMYTNRFGWIEGRNLP 212
Query: 241 AQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWK 300
A RVKS++ YQYV +V+LVLLI GFTVGLVML++G+NG++HC WCHYLSCVPTS WK
Sbjct: 213 ADVRVKSKYKAYQYVCWLVSLVLLIAGFTVGLVMLYKGKNGSEHCHWCHYLSCVPTSSWK 272
Query: 301 C 301
C
Sbjct: 273 C 273
>gi|22122915|gb|AAM92298.1| putative membrane protein [Oryza sativa Japonica Group]
Length = 329
Score = 308 bits (789), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 169/328 (51%), Positives = 219/328 (66%), Gaps = 30/328 (9%)
Query: 2 ASGDLERGKNISNNNNNR-GSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
A D+E+G R GS ++ + Y + +++W WL+P +VANV VF VAMY+N
Sbjct: 6 ARYDVEKGGRKREGEEERCGSPAAVAQYPQREGEREWVPWLVPAILVANVVVFAVAMYVN 65
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
NCP + GG CV L L+E P K+GAL WD+VVHEHQGWRL+
Sbjct: 66 NCPSHASRGG-ACVRIPPPLLLPASLREP---APRPLLRHKMGALVWDKVVHEHQGWRLV 121
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS- 178
TCIWLHAGV+HLLANMLSLV IG+RLEQQFG++R+G +YL+SG GG+ LF+ N++S
Sbjct: 122 TCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLVSGIGGSVLSSLFIRNSISV 181
Query: 179 -----LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFM 216
L LL AAAL+TL+++IAINLA+GILPHVDNFAHIGGF+
Sbjct: 182 GASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLIVIAINLAIGILPHVDNFAHIGGFL 241
Query: 217 AGFLLGFVLLLRPQFGWAERHQLPAQARVKS-RHNPYQYVLCIVALVLLIVGFTVGLVML 275
GFLLGF+ L+RP +GW +R+ LP+ + S ++ YQ++L VA VL ++GF VGL ML
Sbjct: 242 TGFLLGFIFLMRPHYGWMQRYVLPSSVKYTSKKYLAYQWILLAVASVLAVIGFAVGLSML 301
Query: 276 FRGENGNDHCSWCHYLSCVPTSKWKCGN 303
FRG N N+ C WCHYLSC+PTS+W CGN
Sbjct: 302 FRGVNANERCHWCHYLSCIPTSRWTCGN 329
>gi|226494277|ref|NP_001151264.1| membrane protein [Zea mays]
gi|195645390|gb|ACG42163.1| membrane protein [Zea mays]
Length = 414
Score = 308 bits (788), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/306 (50%), Positives = 211/306 (68%), Gaps = 41/306 (13%)
Query: 37 WTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGG-------------RGC-VARFLGRLS 82
W +L+P+F+VAN+ +F++ MY+N+CP + G +GC +A LGR +
Sbjct: 60 WFPFLVPLFIVANIVLFVLTMYVNDCPAHARATGAAIGGSVGESATAQGCWLAPELGRFA 119
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
F+ KENPL GPSS+TL ++GALE +V +H+GWRLITCIWLHAGV+H+LANMLSL+ I
Sbjct: 120 FQSFKENPLIGPSSATLLEMGALETSKVTKDHEGWRLITCIWLHAGVVHILANMLSLLMI 179
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA----------- 184
GIRLE++FGF+R+G +Y++SG GG+ LF+ + +S L LL
Sbjct: 180 GIRLEKEFGFIRIGTLYVISGVGGSLLSSLFMVSNISVGASGALFGLLGSMLSELITNWT 239
Query: 185 ------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
AALLTLV+II INLAVGILPHVDNFAH+GGFM+GF LGFVLL+RPQFG+ +
Sbjct: 240 IYENKFAALLTLVMIILINLAVGILPHVDNFAHLGGFMSGFCLGFVLLMRPQFGYINQKN 299
Query: 239 LP---AQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
P K + YQ +L +++ ++L+ GFT+GLV+LF+G N ++HCSWCHY+SCVP
Sbjct: 300 SPLGFPMGVTKRKFKTYQVILLVISTMILVSGFTIGLVLLFQGFNASEHCSWCHYMSCVP 359
Query: 296 TSKWKC 301
TSKW C
Sbjct: 360 TSKWSC 365
>gi|147777535|emb|CAN75940.1| hypothetical protein VITISV_040961 [Vitis vinifera]
Length = 292
Score = 308 bits (788), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 193/294 (65%), Positives = 222/294 (75%), Gaps = 29/294 (9%)
Query: 1 MASGDLERG---KNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAM 57
MA+ DLERG KN NN + G YSS +YY E S+ WTSWLIPMFVVANVAVF+V M
Sbjct: 1 MANEDLERGGGMKNRGNNGHPPGYYSS-TYYAE-ASETHWTSWLIPMFVVANVAVFVVVM 58
Query: 58 YINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGW 117
Y+N+CPK N CVA+FL RLSF+PL+ENPLFGPSSSTL+KLG LEW++VV+ QGW
Sbjct: 59 YVNDCPKKNTGIEGACVAKFLRRLSFQPLRENPLFGPSSSTLEKLGGLEWNKVVYGDQGW 118
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNA 176
RL+TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR+G +YL+SGFGG+ LF+ +
Sbjct: 119 RLVTCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRIGIIYLVSGFGGSILSSLFIQHN 178
Query: 177 VS------LLVLL-----------------AAALLTLVVIIAINLAVGILPHVDNFAHIG 213
+S L LL AAAL TLVVIIAINLAVGILPHVDNFAHIG
Sbjct: 179 ISVGASGALFGLLGAMLSELITNWSIYTNKAAALFTLVVIIAINLAVGILPHVDNFAHIG 238
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
GF+ GFLLGF+LLLRPQFGW +R PA ARV+S+H YQYV +VA+ LLIVG
Sbjct: 239 GFLTGFLLGFMLLLRPQFGWVKRQHRPADARVQSKHKVYQYVFWLVAMALLIVG 292
>gi|357444041|ref|XP_003592298.1| Rhomboid family member [Medicago truncatula]
gi|355481346|gb|AES62549.1| Rhomboid family member [Medicago truncatula]
Length = 314
Score = 306 bits (784), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 174/326 (53%), Positives = 216/326 (66%), Gaps = 46/326 (14%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
D+E G+ +N SY + ++ SWL+P FV N+ VFIV M INNCP
Sbjct: 6 DVESGRTKNN----------CSYVYVAETHRESCSWLVPAFVFVNIVVFIVVMGINNCPN 55
Query: 65 NNW---EGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLIT 121
+ + CVARFL R SF+P +ENPL GPSS TL K+GAL W VVH+HQ WRL T
Sbjct: 56 TTFGFHKHHHHCVARFLHRFSFQPFRENPLLGPSSLTLIKMGALRWVNVVHQHQEWRLFT 115
Query: 122 CIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS-- 178
CIWLHAG+IHLL+NML LV IGIRLEQQFGFV++G +YLLSGFGG+ + +F+ N++S
Sbjct: 116 CIWLHAGIIHLLSNMLCLVLIGIRLEQQFGFVKIGLIYLLSGFGGSVFSSIFIRNSISVG 175
Query: 179 ----LLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMA 217
L LL A ALLTL+V+IAINL +G+LP VDN AHIGG +
Sbjct: 176 ASSALFGLLGAMISELLTNWTIYSNKVMALLTLLVMIAINLTIGLLPRVDNLAHIGGLVV 235
Query: 218 GFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFR 277
GFLLGF+LL RPQ+ R KS++N YQ+VL IV+LVLL G + GLVMLFR
Sbjct: 236 GFLLGFILLPRPQYDGVLR---------KSKYNAYQFVLGIVSLVLLTAGLSFGLVMLFR 286
Query: 278 GENGNDHCSWCHYLSCVPTSKWKCGN 303
GENG DHC WCHYL+CVP+S+W+C +
Sbjct: 287 GENGYDHCHWCHYLTCVPSSRWECNS 312
>gi|356559855|ref|XP_003548212.1| PREDICTED: inactive rhomboid protein 1-like isoform 2 [Glycine max]
Length = 282
Score = 302 bits (774), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 168/300 (56%), Positives = 204/300 (68%), Gaps = 27/300 (9%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
DLE G N NN S + SY +P + WTSWL+P+FV NV VF+VAMY+N+CP+
Sbjct: 8 DLESGGANKNYNNISYSAAPTSYVYDP--EVHWTSWLVPLFVAVNVVVFVVAMYLNDCPR 65
Query: 65 NNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIW 124
N CVARFLGR SF+PL+ENPLFGPSSSTL K+GAL WD VV+ HQ WRL+TCIW
Sbjct: 66 KNLGFEGECVARFLGRFSFQPLRENPLFGPSSSTLTKMGALRWDDVVNHHQAWRLVTCIW 125
Query: 125 LHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVSLLVLL 183
LHAGV+HL ANMLSLVFIGIRLEQQFGFVR+G +YLLSGFGG+ LF+ N +S V
Sbjct: 126 LHAGVVHLAANMLSLVFIGIRLEQQFGFVRIGIIYLLSGFGGSVLSSLFIRNNIS--VGA 183
Query: 184 AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
+ AL L+ G M L+ + +FGW E+ + PA
Sbjct: 184 SGALFGLL----------------------GAMLSELITNWSIYTNKFGWLEQRRPPAGV 221
Query: 244 RVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
R+KS++ YQYVL IV+ +LLIVG ++ LVMLFRGENG DHC WCHYL+CVPTSKWKC +
Sbjct: 222 RLKSKYKAYQYVLWIVSAILLIVGLSIALVMLFRGENGYDHCHWCHYLTCVPTSKWKCND 281
>gi|357134029|ref|XP_003568622.1| PREDICTED: uncharacterized protein LOC100834911 [Brachypodium
distachyon]
Length = 417
Score = 301 bits (772), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 161/332 (48%), Positives = 221/332 (66%), Gaps = 45/332 (13%)
Query: 15 NNNNRGSYSSGSYYVEPGSD----QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGG 70
++ +RG + +P + ++W +L+P+F+VAN+A+F++ MY N+CP + G
Sbjct: 37 HHGHRGPQHRNGGHPQPPQEFRPFRRWFPFLVPLFIVANIALFVLTMYENDCPAHAAAAG 96
Query: 71 RG-------------CVAR-FLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQG 116
C+ LGR +F+ +ENPL GPSS+TL K+GALE +V +H+G
Sbjct: 97 AAIGGSVGGAGAAQGCLLEPELGRFAFQSYRENPLVGPSSATLLKMGALETSKVAKDHEG 156
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFN 175
WRLITCIWLHAGVIH+LANMLSL+ IGIRLE++FGF+R+G +Y++SG GG+ LF+ +
Sbjct: 157 WRLITCIWLHAGVIHILANMLSLLMIGIRLEKEFGFLRIGTLYVISGVGGSLLSALFMVS 216
Query: 176 AVS------LLVLLA-----------------AALLTLVVIIAINLAVGILPHVDNFAHI 212
+S L LL AALLTLV+IIAINLAVGILPHVDNFAHI
Sbjct: 217 NISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVMIIAINLAVGILPHVDNFAHI 276
Query: 213 GGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARVKSRHNPYQYVLCIVALVLLIVGFT 269
GGF++GF LGFVLL+RPQFG+ + P + K ++ YQ +L ++AL++LI GFT
Sbjct: 277 GGFISGFFLGFVLLIRPQFGYINQKNSPLGLSTGPTKCKYKTYQIILLVIALMILISGFT 336
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+G V+L +G N +++CSWCHYLSCVPTSKW C
Sbjct: 337 IGFVLLMKGFNASENCSWCHYLSCVPTSKWSC 368
>gi|297740363|emb|CBI30545.3| unnamed protein product [Vitis vinifera]
Length = 320
Score = 298 bits (764), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 165/276 (59%), Positives = 198/276 (71%), Gaps = 30/276 (10%)
Query: 52 VFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVV 111
+F + MY+NNCPKN+ C+A FLGR SF+P KENPL GPSSSTLQK+GAL+ RVV
Sbjct: 1 MFGITMYVNNCPKNSIS----CIADFLGRFSFQPFKENPLLGPSSSTLQKMGALDVSRVV 56
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL- 170
HQGWRLITCIWLH GV HLLANMLSL+ IGIRLEQ+FGFV+VG +Y++SGFGG+
Sbjct: 57 DRHQGWRLITCIWLHGGVFHLLANMLSLLVIGIRLEQEFGFVKVGLLYVISGFGGSLLSG 116
Query: 171 LFLFNAVS------LLVLLA-----------------AALLTLVVIIAINLAVGILPHVD 207
LF+ +S L LL AA LTLV+IIAINLAVGILPHVD
Sbjct: 117 LFIQENISVGASGALFGLLGGMLSELITNWSIYANKLAAFLTLVIIIAINLAVGILPHVD 176
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAER-HQLPAQARV-KSRHNPYQYVLCIVALVLLI 265
NFAHIGGF++GFLLGFV L+RPQFGW + + P + K + YQ +L + +++LLI
Sbjct: 177 NFAHIGGFLSGFLLGFVFLIRPQFGWVSQIYASPEHSTSPKPKFKTYQCILWVASVILLI 236
Query: 266 VGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+G T+GLVML RG + ND CSWCHYLSCVPTSKW C
Sbjct: 237 IGLTLGLVMLLRGVDANDRCSWCHYLSCVPTSKWSC 272
>gi|326488163|dbj|BAJ89920.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326499095|dbj|BAK06038.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 342
Score = 298 bits (763), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 168/303 (55%), Positives = 211/303 (69%), Gaps = 29/303 (9%)
Query: 27 YYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRG-CVAR-FLGRLSFE 84
Y E ++Q +WL+P+ V+ANVA+FIV MY N+CP+N G CV R L R SF+
Sbjct: 43 YGQEAERERQHHTWLVPLVVLANVAMFIVVMYYNDCPRNGRGGAAADCVGRGVLRRFSFQ 102
Query: 85 PLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGI 144
PLKENPLFGPSS+TL K G L+ +VVH ++ WRL T WLHAG+IHL ANM+SL+F+G+
Sbjct: 103 PLKENPLFGPSSATLGKYGGLDRYKVVHGNEAWRLETSTWLHAGLIHLGANMISLIFVGV 162
Query: 145 RLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA------------- 184
RLEQQFGF +VG VYL SG GG+ +LF+ N VS L LL
Sbjct: 163 RLEQQFGFWKVGLVYLFSGLGGSVLSVLFIRNGVSVGASGALFGLLGAMLSELITNWTIY 222
Query: 185 ----AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP 240
AA+ L++I AINLA+GILPHVDNFAHIGGF+ GFLLGFVLL++P+FGW E+ P
Sbjct: 223 TNRLAAMANLIIIAAINLALGILPHVDNFAHIGGFLTGFLLGFVLLIQPRFGWLEQ---P 279
Query: 241 AQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWK 300
+ KS++ Q VL ++AL+L I G VGL+M+FRG NGNDHCSWCHY++CVPTS WK
Sbjct: 280 FGGKTKSKYTACQIVLLVLALLLAIAGLAVGLLMVFRGVNGNDHCSWCHYITCVPTSHWK 339
Query: 301 CGN 303
C N
Sbjct: 340 CDN 342
>gi|326504866|dbj|BAK06724.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 418
Score = 288 bits (737), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 153/315 (48%), Positives = 203/315 (64%), Gaps = 48/315 (15%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGC--------------------- 73
++W +L+P+F+ AN+A+F+ MY+N+CP +
Sbjct: 55 RRWFPFLVPLFIAANIALFVRTMYVNDCPAHAAAAAAAIGDSVGGAAGGSAGAAASRGCM 114
Query: 74 VARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLL 133
+ LGR +F+P KENPL GP+S+TL ++GALE +V +H+ WRLITCIWLHAGVIH+L
Sbjct: 115 LEPDLGRYAFQPYKENPLVGPTSATLLQMGALETGKVAKDHEWWRLITCIWLHAGVIHIL 174
Query: 134 ANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA-- 184
ANMLSL+ IGIRLE++FGF+R+G +Y++SG GG+ LF+ + +S L LL
Sbjct: 175 ANMLSLLMIGIRLEKEFGFLRIGTLYVISGVGGSLLSALFMVSNISVGASGALFGLLGSM 234
Query: 185 ---------------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRP 229
AALLTLV+II INLAVGILPHVDNFAHIGGF++GF LGFVLL+RP
Sbjct: 235 LSELITNWTIYENKCAALLTLVMIIVINLAVGILPHVDNFAHIGGFVSGFFLGFVLLMRP 294
Query: 230 QFGWAERHQLPA---QARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCS 286
QFG+ + K ++ PYQ VL ++ALV+LI GF G V+L +G + + CS
Sbjct: 295 QFGYINQKNSRLGVHSGTTKCKYKPYQIVLLVIALVILICGFITGFVLLMQGFDASQQCS 354
Query: 287 WCHYLSCVPTSKWKC 301
WCHYLSCVPTSKW C
Sbjct: 355 WCHYLSCVPTSKWDC 369
>gi|30693911|ref|NP_850698.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
gi|332645622|gb|AEE79143.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
Length = 394
Score = 286 bits (732), Expect = 7e-75, Method: Compositional matrix adjust.
Identities = 162/325 (49%), Positives = 210/325 (64%), Gaps = 36/325 (11%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSD----QQWTSWLIPMFVVANVAVFIVAMYIN 60
DLE ++S R S S Y E G + W WLIP FVVANVAVF++ MY+N
Sbjct: 30 DLESSSSVSGQQ--RSLTQSRSSYEERGRGVKEFRSWFPWLIPCFVVANVAVFVITMYVN 87
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
NCPK + + C A FLGR SF+ +ENPL GPSS TLQ +G L+ +VV +GWRL+
Sbjct: 88 NCPKKSGD----CFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGWRLL 143
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS- 178
+C WLH GV+HLL NML+L+FIGIR+E++FGF+R+G +YL+SGFGG+ LFL + +S
Sbjct: 144 SCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLISGFGGSILSALFLRSNISV 203
Query: 179 -----LLVLLAAAL-----------------LTLVVIIAINLAVGILPHVDNFAHIGGFM 216
+ LL L +TLV+I+A+NL +G+LP VDNFAHIGGF
Sbjct: 204 GASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLIVAVNLGLGVLPGVDNFAHIGGFA 263
Query: 217 AGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
GFLLGFVLL+RP +GW + P R YQ +L ++L++L+ GF VGL+ LF
Sbjct: 264 TGFLLGFVLLIRPHYGWINQRNGPGAK--PHRFKIYQGILWTISLLILVAGFIVGLISLF 321
Query: 277 RGENGNDHCSWCHYLSCVPTSKWKC 301
+GN+HCSWCHYLSCVPTSKW C
Sbjct: 322 NNVDGNEHCSWCHYLSCVPTSKWSC 346
>gi|145329975|ref|NP_001077973.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
gi|77999982|dbj|BAE46872.1| Rhomboid family protein AtRBL1 [Arabidopsis thaliana]
gi|330253109|gb|AEC08203.1| protein RHOMBOID-like 1 [Arabidopsis thaliana]
Length = 346
Score = 280 bits (715), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 154/291 (52%), Positives = 189/291 (64%), Gaps = 61/291 (20%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
+ W WL+P VVAN+A+F ++M+INNCPKN+ C+ARFLGR +F+P+KENPL GP
Sbjct: 52 KLWFPWLVPAIVVANIALFAISMFINNCPKNSAY----CLARFLGRFAFQPMKENPLLGP 107
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
SS TL+K+GAL+ VVH+H+ WRL TCIWLHAGV H+LANMLSL+FIGIRLEQ+FGFVR
Sbjct: 108 SSLTLEKMGALDVSMVVHKHEVWRLFTCIWLHAGVFHVLANMLSLIFIGIRLEQEFGFVR 167
Query: 155 VGFVYLLSGFGGAYYLLFLFN----------------------------------AVSLL 180
+G +Y++SGFGG+ L LFN A S L
Sbjct: 168 IGLLYMISGFGGS-LLSSLFNRAGISVGASGALFGLLGAMLSELLTNWTIYANKVAKSSL 226
Query: 181 VLLAA-------------------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLL 221
V AA ALLTL+ IIAINLAVGILPHVDNFAH+GGF +GFLL
Sbjct: 227 VKQAALSMNDVSIMSLVFLHLQFAALLTLIFIIAINLAVGILPHVDNFAHLGGFTSGFLL 286
Query: 222 GFVLLLRPQFGWAERHQLP---AQARVKSRHNPYQYVLCIVALVLLIVGFT 269
GFV L+RPQ+G+ + P A KS+H PYQYVL I +LVLLI G+T
Sbjct: 287 GFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPYQYVLWITSLVLLIAGYT 337
>gi|297799698|ref|XP_002867733.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297313569|gb|EFH43992.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 318
Score = 279 bits (714), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 167/323 (51%), Positives = 206/323 (63%), Gaps = 36/323 (11%)
Query: 2 ASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINN 61
A D E G+ NN G D +W SW+IP+ V+ANV VFIV MY N+
Sbjct: 6 AEEDPEGGRRRDPNNG-------GETTTATTPDLRWRSWIIPIVVIANVVVFIVVMYFND 58
Query: 62 CPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLIT 121
CP + C+A+FLGR SFE K NPL GPSSSTL+K+GAL W ++VH+ Q WRL T
Sbjct: 59 CPHKS----HHCLAKFLGRFSFESFKSNPLLGPSSSTLEKMGALAWGKIVHKRQVWRLFT 114
Query: 122 CIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS-- 178
C+WLHAGVIHLLANM + FIG+RLEQQFGFVRVG +YL+SGF G+ LFL NA+S
Sbjct: 115 CMWLHAGVIHLLANMCCVAFIGVRLEQQFGFVRVGTIYLVSGFCGSILSCLFLQNAISVG 174
Query: 179 ----LLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMA 217
L LL A AL+ L+VI+ +NL +G LP VDNFAHIGGF+
Sbjct: 175 ASSALFGLLGAMLSELLINWTTYDNKGVALVMLLVIVGVNLGLGTLPPVDNFAHIGGFLG 234
Query: 218 GFLLGFVLLLRPQFGWAE-RHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
GFLLGF+LL+ PQF W E R L VK ++N Q VLCI+A ++ + GFT GLV+LF
Sbjct: 235 GFLLGFLLLIHPQFEWEENRVSLMPGTIVKPKYNTCQLVLCIIASIVFVAGFTSGLVILF 294
Query: 277 RGENGNDHCSWCHYLSCVPTSKW 299
RG+N N +C WCH LS S+W
Sbjct: 295 RGDNLNRYCKWCHKLSYSSKSQW 317
>gi|297820116|ref|XP_002877941.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297323779|gb|EFH54200.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 393
Score = 278 bits (711), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 159/339 (46%), Positives = 208/339 (61%), Gaps = 48/339 (14%)
Query: 5 DLERGKNISNNNN--------------NRGSYSSGSYYVEPGSD----QQWTSWLIPMFV 46
+ R + SNNNN R S S Y E G + W SWLIP FV
Sbjct: 13 EKTRQRESSNNNNIHPMDLESSSLSGQQRSLNRSRSSYEERGRGVKEFRSWFSWLIPCFV 72
Query: 47 VANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALE 106
VANV VF++ MY+NNCPK + + C A FLGR SF+ +ENPL GPSS TLQ +G L+
Sbjct: 73 VANVVVFVITMYVNNCPKKSGD----CFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLD 128
Query: 107 WDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG 166
+VV +GWRL++C WLH GV+HLL NML+L+FIGIR+E++FGF+R+G +YL+SGFGG
Sbjct: 129 VKKVVKGDEGWRLLSCNWLHGGVVHLLVNMLTLLFIGIRMEREFGFIRIGLLYLISGFGG 188
Query: 167 A-YYLLFLFNAVSL-----LVLLAAALLTLVVI------------------IAINLAVGI 202
+ LFL + +S+ + L +L+ + I +A+NL +G+
Sbjct: 189 SILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKIVTIITLVIIVAVNLGLGV 248
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALV 262
LP VDNFAHIGGF GFLLGFVLL+RP +GW + P R YQ +L ++L+
Sbjct: 249 LPGVDNFAHIGGFSTGFLLGFVLLIRPHYGWINQRNAPGAK--PHRFKMYQGILWTISLL 306
Query: 263 LLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LL+ GF GL+ LF +GN HCSWCHYLSC+PTSKW C
Sbjct: 307 LLVAGFITGLISLFNNVDGNKHCSWCHYLSCIPTSKWSC 345
>gi|125575434|gb|EAZ16718.1| hypothetical protein OsJ_32194 [Oryza sativa Japonica Group]
Length = 253
Score = 278 bits (710), Expect = 3e-72, Method: Compositional matrix adjust.
Identities = 137/234 (58%), Positives = 173/234 (73%), Gaps = 25/234 (10%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
LQK+GAL WD+VVHEHQGWRL+TCIWLHAGV+HLLANMLSLV IG+RLEQQFG++R
Sbjct: 20 KEERLQKMGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMR 79
Query: 155 VGFVYLLSGFGGAYY-LLFLFNAVS------LLVLL-----------------AAALLTL 190
+G +YL+SG GG+ LF+ N++S L LL AAAL+TL
Sbjct: 80 IGIIYLVSGIGGSVLSSLFIRNSISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTL 139
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKS-RH 249
+++IAINLA+GILPHVDNFAHIGGF+ GFLLGF+ L+RP +GW +R+ LP+ + S ++
Sbjct: 140 LIVIAINLAIGILPHVDNFAHIGGFLTGFLLGFIFLMRPHYGWMQRYVLPSSVKYTSKKY 199
Query: 250 NPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
YQ++L VA VL ++GF VGL MLFRG N N+ C WCHYLSC+PTS+W CGN
Sbjct: 200 LAYQWILLAVASVLAVIGFAVGLSMLFRGVNANERCHWCHYLSCIPTSRWTCGN 253
>gi|414867424|tpg|DAA45981.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 254
Score = 276 bits (707), Expect = 6e-72, Method: Compositional matrix adjust.
Identities = 143/230 (62%), Positives = 170/230 (73%), Gaps = 25/230 (10%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
LQKLGAL WD+VV EHQGWRL+TCIWLHAGV HLLANM+SLV IG+RLEQQFG+VRVG +
Sbjct: 19 LQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGII 78
Query: 159 YLLSGFGGAYY-LLFLFNAVS------LLVLL-----------------AAALLTLVVII 194
YL+SG GG+ LF+ N +S L LL AAAL+TL+V+I
Sbjct: 79 YLVSGVGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVI 138
Query: 195 AINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR-VKSRHNPYQ 253
AINLA+GILPHVDNFAHIGGF+ GFLLGFVLL+RP +GW +R+ LP+ + ++ YQ
Sbjct: 139 AINLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWMQRYALPSDVKYTTKKYLAYQ 198
Query: 254 YVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ L VA VL ++GF VGL MLFRG N NDHC WCHYLSCVPTS+W CGN
Sbjct: 199 WALLAVASVLAVIGFAVGLGMLFRGVNANDHCGWCHYLSCVPTSRWSCGN 248
>gi|218186222|gb|EEC68649.1| hypothetical protein OsI_37086 [Oryza sativa Indica Group]
Length = 773
Score = 275 bits (702), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 144/280 (51%), Positives = 186/280 (66%), Gaps = 36/280 (12%)
Query: 20 GSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLG 79
GS + YY ++WT W++ ++ V VF+V+MY+N+CP+ N C A FLG
Sbjct: 27 GSLRARPYY------RRWTPWIVAAIALSCVVVFLVSMYVNDCPRRN---SGDCAAGFLG 77
Query: 80 RLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSL 139
R +F+PLKENPL GPSS+TL K+GAL+ +VVH HQGWRLITCIWLHAGV+HLL NML L
Sbjct: 78 RFAFQPLKENPLLGPSSATLLKMGALDVTKVVHGHQGWRLITCIWLHAGVVHLLINMLCL 137
Query: 140 VFIGIRLEQQFGFVRVGFVYLLSGFGGA-YYLLFLFNAV--------------------- 177
+FIGIRLEQ+FGFVR+G VYL+SG GG+ LF+ +++
Sbjct: 138 LFIGIRLEQEFGFVRIGLVYLISGLGGSLMSALFIRSSISVGASGALFGLIGSMLSELIT 197
Query: 178 --SLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW-A 234
SL AALLTLV +I +NLA+GILP VDNFAHIGG ++GFLLGFV+ +RPQF W
Sbjct: 198 NWSLYANKVAALLTLVFVIVVNLALGILPRVDNFAHIGGLISGFLLGFVMFIRPQFAWIN 257
Query: 235 ERHQLPAQ--ARVKSRHNPYQYVLCIVALVLLIVGFTVGL 272
+R P Q A VK +H YQY+L + A ++LIVG +
Sbjct: 258 QRRVAPGQQPAPVKRKHKTYQYILWLAAAIMLIVGHRRAM 297
>gi|212722852|ref|NP_001132594.1| uncharacterized protein LOC100194066 [Zea mays]
gi|194694850|gb|ACF81509.1| unknown [Zea mays]
Length = 248
Score = 274 bits (701), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 142/230 (61%), Positives = 169/230 (73%), Gaps = 25/230 (10%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
LQKLGAL WD+VV EHQGWRL+TCIWLHAGV HLLANM+SLV IG+RLEQQFG+VRVG +
Sbjct: 19 LQKLGALVWDKVVREHQGWRLVTCIWLHAGVAHLLANMISLVLIGLRLEQQFGYVRVGII 78
Query: 159 YLLSGFGGAYY-LLFLFNAVS------LLVLL-----------------AAALLTLVVII 194
YL+SG GG+ LF+ N +S L LL AAAL+TL+V+I
Sbjct: 79 YLVSGVGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYANKAAALVTLLVVI 138
Query: 195 AINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR-VKSRHNPYQ 253
AINLA+GILPHVDNFAHIGGF+ GFLLGFVLL+RP +GW +R+ LP+ + ++ YQ
Sbjct: 139 AINLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWMQRYALPSDVKYTTKKYLAYQ 198
Query: 254 YVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ L VA VL ++GF VGL MLFRG N NDHC WCHYLSCVPTS+W CG
Sbjct: 199 WALLAVASVLAVIGFAVGLGMLFRGVNANDHCGWCHYLSCVPTSRWSCGK 248
>gi|218187509|gb|EEC69936.1| hypothetical protein OsI_00380 [Oryza sativa Indica Group]
Length = 428
Score = 274 bits (700), Expect = 4e-71, Method: Compositional matrix adjust.
Identities = 152/308 (49%), Positives = 206/308 (66%), Gaps = 41/308 (13%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGG-------------RGC-VARFLGR 80
++W +L+P+FVV NVA+F+V MYIN+CP + G +GC + LGR
Sbjct: 72 RRWFPFLVPLFVVVNVALFVVTMYINDCPAHMQATGDAIGGDVGEGAASQGCWLEPELGR 131
Query: 81 LSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLV 140
+F+ KENPL GPSS+TL K+GALE +V ++H+GWRLITCIWLHAGV+H+LANMLSL+
Sbjct: 132 FAFQSYKENPLIGPSSATLLKMGALETSKVTNDHEGWRLITCIWLHAGVVHILANMLSLL 191
Query: 141 FIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLAAALLTLVVI 193
IGIRLE++FGF+R+G +Y++SG GG+ LF+ + +S L LL + L L+
Sbjct: 192 LIGIRLEKEFGFMRIGTLYVISGVGGSLLSALFMVSNISVGASGALFGLLGSMLSELITN 251
Query: 194 IAI-----------------NLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
I NLAVGILPHVDNFAH+GGF +GF LGFVLL+RPQFG+ +
Sbjct: 252 WTIYENKFAALLTLVIIILINLAVGILPHVDNFAHLGGFTSGFFLGFVLLVRPQFGYINQ 311
Query: 237 HQLP---AQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSC 293
P KS++ YQ +L ++A ++LI GFT+G +++ +G N ++HCSWCHYLSC
Sbjct: 312 KNSPLGLPMGTTKSKYKTYQIILWVIATLILISGFTIGFILVLKGFNASEHCSWCHYLSC 371
Query: 294 VPTSKWKC 301
VPTSKW C
Sbjct: 372 VPTSKWSC 379
>gi|7629998|emb|CAB88340.1| putative protein [Arabidopsis thaliana]
Length = 361
Score = 271 bits (693), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 159/325 (48%), Positives = 205/325 (63%), Gaps = 41/325 (12%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSD----QQWTSWLIPMFVVANVAVFIVAMYIN 60
DLE ++S R S S Y E G + W WLIP FVVANVAVF++ MY+N
Sbjct: 2 DLESSSSVSGQQ--RSLTQSRSSYEERGRGVKEFRSWFPWLIPCFVVANVAVFVITMYVN 59
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
NCPK + + C A FLGR SF+ +ENPL GPSS TLQ +G L+ +VV +GWRL+
Sbjct: 60 NCPKKSGD----CFADFLGRFSFQNTRENPLLGPSSLTLQTMGGLDVKKVVKGDEGWRLL 115
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS- 178
+C WLH GV+HLL NML+L+FIGIR+E +R+G +YL+SGFGG+ LFL + +S
Sbjct: 116 SCNWLHGGVVHLLMNMLTLLFIGIRME-----LRIGLLYLISGFGGSILSALFLRSNISV 170
Query: 179 -----LLVLLAAAL-----------------LTLVVIIAINLAVGILPHVDNFAHIGGFM 216
+ LL L +TLV+I+A+NL +G+LP VDNFAHIGGF
Sbjct: 171 GASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLIVAVNLGLGVLPGVDNFAHIGGFA 230
Query: 217 AGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
GFLLGFVLL+RP +GW + P R YQ +L ++L++L+ GF VGL+ LF
Sbjct: 231 TGFLLGFVLLIRPHYGWINQRNGPGAK--PHRFKIYQGILWTISLLILVAGFIVGLISLF 288
Query: 277 RGENGNDHCSWCHYLSCVPTSKWKC 301
+GN+HCSWCHYLSCVPTSKW C
Sbjct: 289 NNVDGNEHCSWCHYLSCVPTSKWSC 313
>gi|110289433|gb|ABG66197.1| Rhomboid family protein, expressed [Oryza sativa Japonica Group]
gi|215686404|dbj|BAG87689.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 227
Score = 270 bits (691), Expect = 4e-70, Method: Compositional matrix adjust.
Identities = 134/227 (59%), Positives = 170/227 (74%), Gaps = 25/227 (11%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+GAL WD+VVHEHQGWRL+TCIWLHAGV+HLLANMLSLV IG+RLEQQFG++R+G +YL+
Sbjct: 1 MGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLV 60
Query: 162 SGFGGAYY-LLFLFNAVS------LLVLL-----------------AAALLTLVVIIAIN 197
SG GG+ LF+ N++S L LL AAAL+TL+++IAIN
Sbjct: 61 SGIGGSVLSSLFIRNSISVGASGALFGLLGAMLSELFTNWTIYTNKAAALVTLLIVIAIN 120
Query: 198 LAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKS-RHNPYQYVL 256
LA+GILPHVDNFAHIGGF+ GFLLGF+ L+RP +GW +R+ LP+ + S ++ YQ++L
Sbjct: 121 LAIGILPHVDNFAHIGGFLTGFLLGFIFLMRPHYGWMQRYVLPSSVKYTSKKYLAYQWIL 180
Query: 257 CIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
VA VL ++GF VGL MLFRG N N+ C WCHYLSC+PTS+W CGN
Sbjct: 181 LAVASVLAVIGFAVGLSMLFRGVNANERCHWCHYLSCIPTSRWTCGN 227
>gi|222617736|gb|EEE53868.1| hypothetical protein OsJ_00361 [Oryza sativa Japonica Group]
Length = 335
Score = 266 bits (681), Expect = 6e-69, Method: Compositional matrix adjust.
Identities = 141/286 (49%), Positives = 188/286 (65%), Gaps = 41/286 (14%)
Query: 57 MYINNCPKNNWEGG-------------RGC-VARFLGRLSFEPLKENPLFGPSSSTLQKL 102
MYIN+CP + G +GC + LGR +F+ KENPL GPSS+TL K+
Sbjct: 1 MYINDCPAHMQATGDAIGGDVGEGAASQGCWLEPELGRFAFQSYKENPLIGPSSATLLKM 60
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GALE +V ++H+GWRLITCIWLHAGV+H+LANMLSL+ IGIRLE++FGF+R+G +Y++S
Sbjct: 61 GALETSKVTNDHEGWRLITCIWLHAGVVHILANMLSLLLIGIRLEKEFGFMRIGTLYVIS 120
Query: 163 GFGGAYY-LLFLFNAVS------LLVLLAAALLTLVVIIAI-----------------NL 198
G GG+ LF+ + +S L LL + L L+ I NL
Sbjct: 121 GVGGSLLSALFMVSNISVGASGALFGLLGSMLSELITNWTIYENKFAALLTLVIIILINL 180
Query: 199 AVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARVKSRHNPYQYV 255
AVGILPHVDNFAH+GGF +GF LGFVLL+RPQFG+ + P KS++ YQ +
Sbjct: 181 AVGILPHVDNFAHLGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQII 240
Query: 256 LCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
L ++A ++LI GFT+G +++ +G N ++HCSWCHYLSCVPTSKW C
Sbjct: 241 LWVIATLILISGFTIGFILVLKGFNASEHCSWCHYLSCVPTSKWSC 286
>gi|3461845|gb|AAC33231.1| hypothetical protein [Arabidopsis thaliana]
Length = 372
Score = 265 bits (678), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 154/317 (48%), Positives = 189/317 (59%), Gaps = 87/317 (27%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
+ W WL+P VVAN+A+F ++M+INNCPKN+ C+ARFLGR +F+P+KENPL GP
Sbjct: 52 KLWFPWLVPAIVVANIALFAISMFINNCPKNS----AYCLARFLGRFAFQPMKENPLLGP 107
Query: 95 SSST--------------------------LQKLGALEWDRVVHEHQGWRLITCIWLHAG 128
SS T L+K+GAL+ VVH+H+ WRL TCIWLHAG
Sbjct: 108 SSLTWVTLKISTLFLKIPHLIEIRVSEFEILEKMGALDVSMVVHKHEVWRLFTCIWLHAG 167
Query: 129 VIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFN------------- 175
V H+LANMLSL+FIGIRLEQ+FGFVR+G +Y++SGFGG+ L LFN
Sbjct: 168 VFHVLANMLSLIFIGIRLEQEFGFVRIGLLYMISGFGGS-LLSSLFNRAGISVGASGALF 226
Query: 176 ---------------------AVSLLVLLAA-------------------ALLTLVVIIA 195
A S LV AA ALLTL+ IIA
Sbjct: 227 GLLGAMLSELLTNWTIYANKVAKSSLVKQAALSMNDVSIMSLVFLHLQFAALLTLIFIIA 286
Query: 196 INLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARVKSRHNPY 252
INLAVGILPHVDNFAH+GGF +GFLLGFV L+RPQ+G+ + P A KS+H PY
Sbjct: 287 INLAVGILPHVDNFAHLGGFTSGFLLGFVFLIRPQYGYFNQRNNPRGYAAPSAKSKHKPY 346
Query: 253 QYVLCIVALVLLIVGFT 269
QYVL I +LVLLI G+T
Sbjct: 347 QYVLWITSLVLLIAGYT 363
>gi|255635820|gb|ACU18258.1| unknown [Glycine max]
Length = 239
Score = 263 bits (673), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 139/234 (59%), Positives = 164/234 (70%), Gaps = 25/234 (10%)
Query: 5 DLERGKN-ISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCP 63
DLE G NN +YS+ S+ WTSWL+PMFVVAN+AVF++ MYINNCP
Sbjct: 4 DLESGGGGTKNNRTAEENYSAPESSHVYDSETHWTSWLVPMFVVANIAVFVITMYINNCP 63
Query: 64 KNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCI 123
+NN CVARFLGR SF+P++ENPL GPSSSTL K+GAL WD VV+ HQGWRL TCI
Sbjct: 64 RNNLRFQGRCVARFLGRFSFQPMQENPLLGPSSSTLTKMGALRWDNVVNRHQGWRLFTCI 123
Query: 124 WLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS---- 178
WLHAGVIHLLANMLSLVFIGIRLEQQFGF+++G +YL+SGFGG+ LF+ + +S
Sbjct: 124 WLHAGVIHLLANMLSLVFIGIRLEQQFGFIKIGIIYLVSGFGGSVLSSLFIRDHISVGAS 183
Query: 179 --LLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIG 213
L LL A AL+TL+VII INL +GILPHVDNFAHIG
Sbjct: 184 GALFGLLGAMLSELITNWTIYSNKAMALITLLVIIVINLGIGILPHVDNFAHIG 237
>gi|186520951|ref|NP_001119182.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
gi|332003745|gb|AED91128.1| RHOMBOID-like protein 3 [Arabidopsis thaliana]
Length = 299
Score = 259 bits (663), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 157/285 (55%), Positives = 196/285 (68%), Gaps = 29/285 (10%)
Query: 23 SSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGR---GCVARFLG 79
SS + + + +WTSWL+PMFVVANVAVF+VAM++NNCP N++E R CVA+FLG
Sbjct: 39 SSSTEFGDNALSSRWTSWLVPMFVVANVAVFVVAMFVNNCP-NHFESHRLRGHCVAKFLG 97
Query: 80 RLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSL 139
RLSFEPL+ NPLFGPSS TL+KLGALEW +VV + +GWRL+TCIWLHAGVIHL ANMLSL
Sbjct: 98 RLSFEPLRTNPLFGPSSHTLEKLGALEWSKVVEKKEGWRLLTCIWLHAGVIHLGANMLSL 157
Query: 140 VFIGIRLEQQFGFVRVGFVYLLSGFGGA-YYLLFLFNAVSLLVLLAAALLTLVVIIAINL 198
VFIGIRLEQQFGFVR+G +YLLSG GG+ LF+ N++S V + AL L+
Sbjct: 158 VFIGIRLEQQFGFVRIGVIYLLSGIGGSVLSSLFIRNSIS--VGASGALFGLL------- 208
Query: 199 AVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCI 258
G M L + +F W R +P ++ ++ YQY+L +
Sbjct: 209 ---------------GSMLSELFTNWTIYSNKFKWLAREHMPQGTPLRYKYKTYQYLLWL 253
Query: 259 VALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
++LVLLI GF V L+MLFRGENGNDHC WCHYL CVPTS W+C +
Sbjct: 254 LSLVLLIAGFVVALLMLFRGENGNDHCRWCHYLRCVPTSSWRCDD 298
>gi|297743435|emb|CBI36302.3| unnamed protein product [Vitis vinifera]
Length = 289
Score = 259 bits (662), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 134/261 (51%), Positives = 178/261 (68%), Gaps = 30/261 (11%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCV-ARFLGRLSFEPLKENPLFG 93
+ W WL+P+F +ANVA F+ +MY+NNCP+ G CV +LGR SF+PL ENPLFG
Sbjct: 31 KSWFPWLVPVFFMANVATFVYSMYVNNCPEKT--GADRCVFNSYLGRFSFQPLSENPLFG 88
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
PS +TL+KLGALE VV E + WRL++CIWLHAG IHL+ANMLSL+FIG++LEQ+FGF+
Sbjct: 89 PSPTTLEKLGALEKKLVVQEGEEWRLVSCIWLHAGAIHLIANMLSLLFIGVKLEQEFGFL 148
Query: 154 RVGFVYLLSGFGGAY------------------------YLLFLFNAVSLLVLLAAALLT 189
R+G +Y++SGFGG+ L LF ++ AAL+T
Sbjct: 149 RIGLLYVISGFGGSLLSALHLQKSISVGASGALFGLLGAMLSELFMNWTIYANKCAALMT 208
Query: 190 LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA---QARVK 246
L+ ++ +NLAVG LPHVD+ AHIGGF++GFLLGF+LL+RPQ+G+ R +P RVK
Sbjct: 209 LMFVVVLNLAVGFLPHVDSSAHIGGFLSGFLLGFILLVRPQYGYVSRKYIPPGYDGKRVK 268
Query: 247 SRHNPYQYVLCIVALVLLIVG 267
S+H YQY+L + ALV LI G
Sbjct: 269 SKHKWYQYLLWVAALVALIFG 289
>gi|15236387|ref|NP_194038.1| RHOMBOID-like protein 7 [Arabidopsis thaliana]
gi|3292833|emb|CAA19823.1| putative membrane protein [Arabidopsis thaliana]
gi|7269154|emb|CAB79262.1| putative membrane protein [Arabidopsis thaliana]
gi|332659302|gb|AEE84702.1| RHOMBOID-like protein 7 [Arabidopsis thaliana]
Length = 313
Score = 251 bits (642), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 163/323 (50%), Positives = 205/323 (63%), Gaps = 41/323 (12%)
Query: 2 ASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINN 61
A D E G +NN E D QW SW+IP+ V+ANV VF+V MY N+
Sbjct: 6 AEEDPEGGSRETNNGG------------ETTPDMQWRSWIIPIVVIANVVVFVVVMYYND 53
Query: 62 CPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLIT 121
CP + C+A+FLGR SFE K NPL GPSSSTL+K+GAL W ++VH+ Q WRL+T
Sbjct: 54 CPHKS----HRCLAKFLGRFSFESFKSNPLLGPSSSTLEKMGALAWGKIVHKRQVWRLLT 109
Query: 122 CIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS-- 178
C+WLHAGVIHLLANM + +IG+RLEQQFGFVRVG +YL+SGF G+ LFL +A+S
Sbjct: 110 CMWLHAGVIHLLANMCCVAYIGVRLEQQFGFVRVGTIYLVSGFCGSILSCLFLEDAISVG 169
Query: 179 ----LLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMA 217
L LL A A++ L+VI+ +NL +G LP VDNFAHIGGF
Sbjct: 170 ASSALFGLLGAMLSELLINWTTYDNKGVAIVMLLVIVGVNLGLGTLPPVDNFAHIGGFFG 229
Query: 218 GFLLGFVLLLRPQFGWAERH-QLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
GFLLGF+LL+ PQF W E L VK ++N Q VLCIVA ++ + GFT GLV+LF
Sbjct: 230 GFLLGFLLLIHPQFEWEENQVSLMPGTIVKPKYNTCQLVLCIVASIVFVAGFTSGLVILF 289
Query: 277 RGENGNDHCSWCHYLSCVPTSKW 299
RG++ N +C WCH LS S+W
Sbjct: 290 RGDSLNRYCKWCHKLSYSSKSQW 312
>gi|195622898|gb|ACG33279.1| membrane protein [Zea mays]
Length = 226
Score = 251 bits (640), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 139/225 (61%), Positives = 170/225 (75%), Gaps = 26/225 (11%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+GAL+W+++VH++QGWRLI+CIWLHAG+IHL+ NMLSL+FIGIRLEQQFGFVR+G +YLL
Sbjct: 1 MGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVRIGAIYLL 60
Query: 162 SGFGGAYY-LLFLFNAV--------------SLLVLL----------AAALLTLVVIIAI 196
SGFGG+ LFL N+ S+L L AAA++TL+ IIA+
Sbjct: 61 SGFGGSVLSALFLRNSYISVGASGALFGLLGSMLSELLMNWTIYSNKAAAIITLLFIIAL 120
Query: 197 NLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVL 256
NLA+GILPHVDNFAHIGGF GFLLGFVLL RPQF W E H+LP ++ YQY+L
Sbjct: 121 NLAIGILPHVDNFAHIGGFATGFLLGFVLLARPQFSWMESHELP-HTNQPPKYKAYQYIL 179
Query: 257 CIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+VALVLL+VGF + LVMLF+G+NGND C WCHYL+CVPTSKWKC
Sbjct: 180 WVVALVLLLVGFVISLVMLFKGKNGNDGCHWCHYLNCVPTSKWKC 224
>gi|124359588|gb|ABD28718.2| Protein secE/sec61-gamma protein; Rhomboid-like protein [Medicago
truncatula]
Length = 324
Score = 247 bits (630), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 130/292 (44%), Positives = 186/292 (63%), Gaps = 43/292 (14%)
Query: 36 QWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCV-ARFLGRLSFEPLKENPLFGP 94
QW SWL+P+F +AN+A+F+ +MYIN+CP + C+ ++LG+ SF+P ENPL GP
Sbjct: 30 QWFSWLVPLFFLANIAMFVYSMYINDCP--GYLNEDDCLWYQYLGKFSFQPFNENPLLGP 87
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S TL+ LGALE D VV E++ WR ITC++LHAGVIHLLANM SL+FIG+RLE +FGF++
Sbjct: 88 SVRTLRVLGALERDLVVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFLK 147
Query: 155 VGFVYLLSGFGGAY-------------------------------------YLLFLFNAV 177
+G +YLLSGFGG+ + ++L
Sbjct: 148 IGVLYLLSGFGGSLLSILHMGDVKAPNTVSVGASGALFGLLGAMLSELLTNWTIYLNKGE 207
Query: 178 SLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERH 237
L + AL +L++II +NLAVG +PHVDN AHIGGF++GF LGFV+L+RPQFG+
Sbjct: 208 KPLTVQFKALTSLLLIIGLNLAVGFIPHVDNSAHIGGFLSGFFLGFVILMRPQFGYVNNK 267
Query: 238 QLPA--QARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSW 287
+P A+ KS++ YQY +++++ L++G+ GL L+ GE+ ND S+
Sbjct: 268 YIPPGYDAKRKSKYKGYQYFFLVLSVITLLIGYAYGLATLYIGES-NDVFSY 318
>gi|242056443|ref|XP_002457367.1| hypothetical protein SORBIDRAFT_03g006170 [Sorghum bicolor]
gi|241929342|gb|EES02487.1| hypothetical protein SORBIDRAFT_03g006170 [Sorghum bicolor]
Length = 338
Score = 246 bits (627), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 132/272 (48%), Positives = 180/272 (66%), Gaps = 41/272 (15%)
Query: 37 WTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGG-------------RGCV-ARFLGRLS 82
W +L+P+F++ANV +F++ MY+N+CP + G +GC+ A LGR +
Sbjct: 67 WFPFLVPLFILANVVLFVLTMYVNDCPAHARATGAAIGGSVGESATAQGCLLAPELGRFA 126
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
F+ KENPL GP+S+TL ++GALE +V +H+GWRLITCIWLHAGVIH+LANMLSL+ I
Sbjct: 127 FQSFKENPLIGPTSATLLEMGALETSKVTKDHEGWRLITCIWLHAGVIHILANMLSLLMI 186
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLA----------- 184
GIRLE++FGF+R+G +Y++SG GG+ LF+ + +S L LL
Sbjct: 187 GIRLEKEFGFIRIGTLYVISGVGGSLLSSLFMVSNISVGASGALFGLLGSMLSELITNWT 246
Query: 185 ------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
AALLTLV+II INLAVGILPHVDNFAH+GGFM+GF LGFVLL+RPQFG+ +
Sbjct: 247 IYENKFAALLTLVMIIVINLAVGILPHVDNFAHLGGFMSGFCLGFVLLIRPQFGYINQKN 306
Query: 239 LP---AQARVKSRHNPYQYVLCIVALVLLIVG 267
P K + YQ VL ++A ++++ G
Sbjct: 307 SPLGFPAGVTKQKFKIYQIVLLVIATMMIVSG 338
>gi|168030936|ref|XP_001767978.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680820|gb|EDQ67253.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 322
Score = 243 bits (619), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 138/316 (43%), Positives = 190/316 (60%), Gaps = 38/316 (12%)
Query: 20 GSYSSGSYYVEPGSDQQWTSWLIPMF----VVANVAVFIVAMYINNCPKNNWEGGRGCVA 75
GSYSS YV + + W P+F VVAN+ V +V MY NNCP N G + +
Sbjct: 10 GSYSS---YVATPAKRHKRCW--PIFTLGAVVANIIVLVVVMYENNCPANIGYGRKCVLG 64
Query: 76 RFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLAN 135
R+SF+P ENPL GPSS+TLQK+G L D VV + QGWRL++C+WLHAGV HLL N
Sbjct: 65 SSFKRMSFQPWSENPLLGPSSATLQKMGGLRTDLVVDQKQGWRLMSCVWLHAGVFHLLVN 124
Query: 136 MLSLVFIGIRLEQQFGFVRVGFVYLLS------------------GFGGAYYLLFLFNAV 177
M++L+ GI LE+ FGF+R+G +YL+S G GA + L
Sbjct: 125 MIALLVFGIELERDFGFIRIGLLYLISGLGGSLLSSLFNHNAISVGASGALFGLLGATTS 184
Query: 178 SLLV------LLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
L+ + L L+++ +NLA+G+LP VDNFAHIGGF+ GFLLGF+LL++ Q+
Sbjct: 185 ELITNWSRYRSRCSQLFQLIIVTGVNLAIGLLPRVDNFAHIGGFVTGFLLGFILLMKEQY 244
Query: 232 GWAERHQLPAQARVKSRH----NPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSW 287
+ +R L R+ +H YQ++L +V+L+LLI GF G V L+ G + + CSW
Sbjct: 245 RYVQRSTL-LDPRMDPQHVKRFKTYQFILLLVSLLLLIAGFAGGFVALYSGVDAYNRCSW 303
Query: 288 CHYLSCVPTSKWKCGN 303
CHYL+CVP+S W C +
Sbjct: 304 CHYLNCVPSSHWTCDS 319
>gi|222629393|gb|EEE61525.1| hypothetical protein OsJ_15827 [Oryza sativa Japonica Group]
Length = 301
Score = 237 bits (604), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 124/233 (53%), Positives = 158/233 (67%), Gaps = 30/233 (12%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P S L+K GAL+W VVH +Q WRL T WLHAG+IHL ANM+SL+ IGIRLEQQFGF
Sbjct: 72 PCSWWLRKYGALDWYGVVHGNQAWRLETSTWLHAGLIHLAANMISLLIIGIRLEQQFGFW 131
Query: 154 RVGFVYLLSGFGGAYYLLFLFN--------AVSLLVLLA-----------------AALL 188
+VG VYL+SGFGG+ + + + +L LL AA++
Sbjct: 132 KVGLVYLVSGFGGSVLSVLFISRNGITVGASGALFGLLGAMLSELITNWTIYSNRCAAMV 191
Query: 189 TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSR 248
L++I AINLA+GILP VDNFAHIGGF GFLLGFVLL++PQFGW+E+ + KS+
Sbjct: 192 NLIIIAAINLALGILPRVDNFAHIGGFATGFLLGFVLLIQPQFGWSEQ-----VSSAKSK 246
Query: 249 HNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+N +Q +L +++ LLI GF GLV +F+G +GN HCSWCHYL+CVPTS WKC
Sbjct: 247 YNAFQIILLTLSVALLIAGFAAGLVSVFKGVDGNAHCSWCHYLTCVPTSSWKC 299
>gi|317106731|dbj|BAJ53227.1| JHL06P13.7 [Jatropha curcas]
Length = 311
Score = 234 bits (596), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 125/276 (45%), Positives = 171/276 (61%), Gaps = 30/276 (10%)
Query: 33 SDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCV-ARFLGRLSFEPLKENPL 91
+QWT WL+P+ ANV +FI MY N+CP + G C+ +LGR SF+P KEN +
Sbjct: 29 KQEQWTPWLVPLIFAANVTMFIYTMYDNDCP--TYTGTDKCLFYEYLGRYSFQPFKENAV 86
Query: 92 FGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
GPS TL+ LGAL+ RV + WR +CIWLHAGV+HLL NM+SL+FIGI LEQ+FG
Sbjct: 87 LGPSVITLELLGALDPLRVERNGEAWRFFSCIWLHAGVLHLLTNMISLLFIGIPLEQEFG 146
Query: 152 FVRVGFVYLLSGFGGAY------------------------YLLFLFNAVSLLVLLAAAL 187
F+R+G +Y++SGFGG+ L LF + V A+
Sbjct: 147 FLRIGLLYVMSGFGGSLMSALSPEPNISVGASGALFGLLGSMLSELFLNWTTYVNKCKAV 206
Query: 188 LTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA---QAR 244
+L++II +NL+ G++PHVDN AHIGGF++GFLLGF+LL+RPQ+G+ R +PA +
Sbjct: 207 TSLLLIIGLNLSFGLIPHVDNSAHIGGFLSGFLLGFILLMRPQYGYVSRRYIPAGYDMIK 266
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGEN 280
K +H YQY+L I+A V LI + GL M + G
Sbjct: 267 KKPKHKCYQYLLFIIASVALIFWYLWGLDMFYNGRR 302
>gi|356557245|ref|XP_003546928.1| PREDICTED: rhomboid-related protein 3-like [Glycine max]
Length = 324
Score = 226 bits (577), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 121/309 (39%), Positives = 188/309 (60%), Gaps = 42/309 (13%)
Query: 7 ERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNN 66
++ ++S+ R S + P W WL+P+ +A +A+F+ MY N+CP
Sbjct: 3 KKPPHLSDVEAARNPPSPPPTFHVP-LPSMWFPWLVPLIFLATIAMFVYTMYENDCPA-- 59
Query: 67 WEGGRGCV-ARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWL 125
+ C+ +++LGR SF+P +ENPL GP+ TL+ LGALE + VV +++ WR +C++L
Sbjct: 60 YLDEEVCLFSQYLGRFSFQPFRENPLLGPAIRTLRLLGALEKELVVDQNEVWRFFSCMFL 119
Query: 126 HAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLF-----NAVSL- 179
HAGV+HLLANM SL+FIG+RLE++FGF+++G +Y+LSGFGG+ + N VS+
Sbjct: 120 HAGVVHLLANMFSLLFIGVRLEKEFGFLKIGLLYVLSGFGGSVLSVLHLKESEANTVSVG 179
Query: 180 ------------------------------LVLLAAALLTLVVIIAINLAVGILPHVDNF 209
+L AAL +L++I+ +NLAVG LPHVDN
Sbjct: 180 ASGALFGLLGAMLSELLTNWSIYANKVLYPCLLQCAALTSLLIIVGLNLAVGFLPHVDNS 239
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA--QARVKSRHNPYQYVLCIVALVLLIVG 267
AH+GGF+AG+ LGFVLL+RPQ+G+ R +P + KS++ YQY I+++++L++G
Sbjct: 240 AHVGGFLAGYFLGFVLLMRPQYGYVNRKYIPPGYDVKRKSKYKWYQYFFLIMSVIILLLG 299
Query: 268 FTVGLVMLF 276
+ GL L+
Sbjct: 300 YAYGLAKLY 308
>gi|242072091|ref|XP_002451322.1| hypothetical protein SORBIDRAFT_05g027720 [Sorghum bicolor]
gi|241937165|gb|EES10310.1| hypothetical protein SORBIDRAFT_05g027720 [Sorghum bicolor]
Length = 292
Score = 226 bits (576), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 124/242 (51%), Positives = 153/242 (63%), Gaps = 42/242 (17%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+GAL+ +VVH QGWRLITC+WLHAGV+HLL NML LV IGIRLEQ+FGFVR+G VYL+
Sbjct: 1 MGALDVPKVVHGRQGWRLITCMWLHAGVVHLLINMLCLVIIGIRLEQEFGFVRIGLVYLI 60
Query: 162 SGFGGAYY-LLFLFNAVS------LLVLLAAALLTLVV---IIAINLAV----------- 200
SGFGG+ LF+ + VS L L+ + L L+ + A +A
Sbjct: 61 SGFGGSLMSALFIQSNVSVGASGALFGLIGSMLSELITNWSLYANKVAALVTLVLVIVVN 120
Query: 201 ---GILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA-------------- 243
G+LP VDNFAHIGG ++GFLLGFV +RPQF W +H+ + A
Sbjct: 121 LALGLLPRVDNFAHIGGLISGFLLGFVFFIRPQFAWLTQHRRVSAAAQPDGQPPAAAPTP 180
Query: 244 ----RVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
VK +H YQYVL + A VLL+VGFTV V+LFRG N N+HC WCHYLSCVPT +W
Sbjct: 181 PPVVSVKRKHKTYQYVLWLAAAVLLVVGFTVATVLLFRGYNANEHCPWCHYLSCVPTKRW 240
Query: 300 KC 301
KC
Sbjct: 241 KC 242
>gi|297847644|ref|XP_002891703.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
gi|297337545|gb|EFH67962.1| rhomboid family protein [Arabidopsis lyrata subsp. lyrata]
Length = 309
Score = 226 bits (575), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 128/278 (46%), Positives = 168/278 (60%), Gaps = 35/278 (12%)
Query: 30 EPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVA-RFLGRLSFEPLKE 88
P W +WL+P+ + AN F MY+N+CP + E C+ LGRLSF+P+KE
Sbjct: 24 RPPIPVPWVAWLVPLILAANFVTFATTMYVNDCPARSDE----CLLFDVLGRLSFQPIKE 79
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
N L GPS TL+KLGALE R+V E + WRLI+CIWLH G +HL+ANM+SL+ IG+RLEQ
Sbjct: 80 NMLLGPSIPTLRKLGALE-RRLVEEGERWRLISCIWLHGGFLHLMANMISLMCIGMRLEQ 138
Query: 149 QFGFVRVGFVYLLSGFG-----------------GAYYLLFLFNAVSLLVLLA------- 184
+FGF+R+G +Y++SG G GA LF L L+
Sbjct: 139 EFGFMRIGALYVISGLGGSLMSCLTDSQGERVSVGASGALFGLLGAMLSELITNWTIYEN 198
Query: 185 --AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA- 241
AL+TLV+II +NL+VG LP VDN AH GGF+AGF LGFVLLLRPQ+G+ +P
Sbjct: 199 KCTALMTLVLIIVLNLSVGFLPRVDNSAHFGGFLAGFFLGFVLLLRPQYGYVSPKYIPPG 258
Query: 242 --QARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFR 277
KS+H YQ++L +L +L+VGF G L R
Sbjct: 259 YDMKHKKSKHKCYQHILMYTSLAVLLVGFIAGYTKLLR 296
>gi|255553147|ref|XP_002517616.1| KOM, putative [Ricinus communis]
gi|223543248|gb|EEF44780.1| KOM, putative [Ricinus communis]
Length = 303
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 123/273 (45%), Positives = 174/273 (63%), Gaps = 29/273 (10%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVA-RFLGRLSFEPLKENPLFG 93
++W SWL+P+ N+ +F+ MY+N+CP G C+ LGR SF+PL+EN + G
Sbjct: 32 EKWRSWLVPVIFSVNITIFVYTMYVNDCPAKT--GADKCLLYDLLGRFSFQPLQENAVLG 89
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
PS TL++LGAL+ +V + WR +CIWLHAGV+HL NM+SL+FIGIRLE++FGF+
Sbjct: 90 PSVITLERLGALDPMAIVKNGEAWRFFSCIWLHAGVVHLFTNMISLLFIGIRLEEEFGFL 149
Query: 154 RVGFVYLLSGFGGA------------------------YYLLFLFNAVSLLVLLAAALLT 189
R+G +Y+LSGFGG+ L L ++ +A+ T
Sbjct: 150 RIGLLYVLSGFGGSLMSSLRRKPSISVGASGALLGLLGSMLSELLMNWTIYANKCSAIST 209
Query: 190 LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA--QARVKS 247
L++IIA+NLA G++PHVDN AHIGGF++GFLLGF+LL+RPQ+G+ +P + KS
Sbjct: 210 LLLIIALNLAFGLIPHVDNSAHIGGFLSGFLLGFILLMRPQYGYVSSRYIPVGYNIKKKS 269
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGEN 280
+H YQY+L I ALV+LIVG+ GL L+ G
Sbjct: 270 KHKCYQYLLLITALVVLIVGYIWGLAALYGGHT 302
>gi|357142172|ref|XP_003572482.1| PREDICTED: uncharacterized protein LOC100827999 [Brachypodium
distachyon]
Length = 364
Score = 223 bits (569), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 126/305 (41%), Positives = 174/305 (57%), Gaps = 33/305 (10%)
Query: 27 YYVEPGSDQQWTSW--LIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFE 84
+ +E SD W +P + V+VF + MY+N+CP N CVA GR+SF+
Sbjct: 63 FSIEMLSDPLARFWPMFVPYVICVCVSVFSIVMYVNDCPGNTPGAAASCVAAGFGRVSFQ 122
Query: 85 PLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGI 144
P+ ENPL GPS +TL+K+GAL+W +VVH HQ RL TC W+HAG+IHL LSL G+
Sbjct: 123 PIHENPLLGPSYATLEKMGALDWAKVVHGHQISRLFTCFWVHAGLIHLFVTQLSLCSFGV 182
Query: 145 RLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLV------------- 191
R EQQFGF+R+ +YLLSG GG+ A S+ V + +L L+
Sbjct: 183 RFEQQFGFLRIVIIYLLSGLGGSVLSALFLPAGSVSVGASGPVLGLIGAMVSEIAINWNA 242
Query: 192 ------------VIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRP-QFGWAERHQ 238
+I IN+ +GI PH DNF +IGGF+ GFLLGF++L P + G+ + +
Sbjct: 243 YSNRKPALAILGLIAVINMVMGIFPHTDNFTNIGGFLTGFLLGFLVLADPARIGFLPQSR 302
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
Q + KS Y Y + +L+LL+VGF V L +LF G+NG +L+CVPTS
Sbjct: 303 TSEQPKYKS----YHYAVFGASLLLLLVGFAVALTVLFEGKNGGGGGGGL-FLNCVPTSG 357
Query: 299 WKCGN 303
WKC +
Sbjct: 358 WKCSS 362
>gi|15219034|ref|NP_175667.1| RHOMBOID-like protein 5 [Arabidopsis thaliana]
gi|5903047|gb|AAD55606.1|AC008016_16 F6D8.20 [Arabidopsis thaliana]
gi|332194705|gb|AEE32826.1| RHOMBOID-like protein 5 [Arabidopsis thaliana]
Length = 309
Score = 223 bits (568), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 126/288 (43%), Positives = 168/288 (58%), Gaps = 35/288 (12%)
Query: 20 GSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVA-RFL 78
G + P W +WL+P+ + AN F MY+N+CP + E C+ L
Sbjct: 14 GPPPPARPHFRPPIPVPWVAWLVPLILAANFVTFATTMYVNDCPARSDE----CLLFDVL 69
Query: 79 GRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLS 138
GRLSF+P+KEN L GPS TL+KLGALE R+V E + WRLI+CIWLH G +HL+ANM+S
Sbjct: 70 GRLSFQPIKENMLLGPSIPTLRKLGALE-RRLVEEGERWRLISCIWLHGGFLHLMANMIS 128
Query: 139 LVFIGIRLEQQFGFVRVGFVYLLSGFG-----------------GAYYLLFLFNAVSLLV 181
L+ IG+RLEQ+FGF+R+G +Y++SG G GA LF L
Sbjct: 129 LMCIGMRLEQEFGFMRIGALYVISGLGGSLVSCLTDSQGERVSVGASGALFGLLGAMLSE 188
Query: 182 LLA---------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ AL+TL++II +NL+VG LP VDN AH GGF+AGF LGFVLLLRPQ+G
Sbjct: 189 LITNWTIYENKCTALMTLILIIVLNLSVGFLPRVDNSAHFGGFLAGFFLGFVLLLRPQYG 248
Query: 233 WAERHQLPA---QARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFR 277
+ +P KS+H YQ++ +L +L+ GF G L R
Sbjct: 249 YVNPKYIPPGYDMKHKKSKHKCYQHIFRFTSLAILLAGFIAGYTKLLR 296
>gi|297842567|ref|XP_002889165.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297335006|gb|EFH65424.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 351
Score = 218 bits (556), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 118/332 (35%), Positives = 186/332 (56%), Gaps = 39/332 (11%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
++ + S +N S+ S++ + +WL+ +FV+ + +F V M +N+C +
Sbjct: 14 EISHNLSFSTSNAGDSSWDKISFFRHRSRQIKRDTWLVSVFVLLQIVLFAVTMGVNDCSR 73
Query: 65 NNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIW 124
N+ C A+ LGR SF+PL ENP+ GPS+STL+ +G L W+ + H+ WR++T W
Sbjct: 74 NS---HGHCAAKLLGRFSFQPLSENPMLGPSASTLEHMGGLSWNTLTENHEIWRILTSPW 130
Query: 125 LHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS----- 178
LH+G+ HL N+ SL+F+GI +EQQFG +R+ +YLLSG G+ + +LF+ N S
Sbjct: 131 LHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYLLSGIMGSLFAVLFVRNISSISSGA 190
Query: 179 --------LLVLLA----------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFL 220
+L LA +AL+ + I +N+ +G LP +DNFA+IGGF++GFL
Sbjct: 191 AFFGLIGAMLSALAKNWNLYTGKISALVIIFTIFTVNILIGFLPFIDNFANIGGFISGFL 250
Query: 221 LGFVLLLRPQF--------GWAERHQLPAQARVKSRHN-PYQYVLCIVALVLLIVGFTVG 271
LGFVLL +PQ G R+K + + P ++C+V ++ G
Sbjct: 251 LGFVLLFKPQLRQMPPSHKGKLFEDDTNRSTRLKDQFDRPVLRIICLVVFCGMLAGV--- 307
Query: 272 LVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L+ + G N N HC WC Y+ CVPT++W C +
Sbjct: 308 LLAVCWGVNLNRHCHWCRYVDCVPTNRWSCSD 339
>gi|18409916|ref|NP_566989.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
gi|119360121|gb|ABL66789.1| At3g53780 [Arabidopsis thaliana]
gi|332645621|gb|AEE79142.1| RHOMBOID-like protein 4 [Arabidopsis thaliana]
Length = 270
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 112/224 (50%), Positives = 150/224 (66%), Gaps = 26/224 (11%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+G L+ +VV +GWRL++C WLH GV+HLL NML+L+FIGIR+E++FGF+R+G +YL+
Sbjct: 1 MGGLDVKKVVKGDEGWRLLSCNWLHGGVVHLLMNMLTLLFIGIRMEREFGFIRIGLLYLI 60
Query: 162 SGFGGAYY-LLFLFNAVS------LLVLLAAAL-----------------LTLVVIIAIN 197
SGFGG+ LFL + +S + LL L +TLV+I+A+N
Sbjct: 61 SGFGGSILSALFLRSNISVGASGAVFGLLGGMLSEIFINWTIYSNKVVTIVTLVLIVAVN 120
Query: 198 LAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
L +G+LP VDNFAHIGGF GFLLGFVLL+RP +GW + P R YQ +L
Sbjct: 121 LGLGVLPGVDNFAHIGGFATGFLLGFVLLIRPHYGWINQRNGPGAK--PHRFKIYQGILW 178
Query: 258 IVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++L++L+ GF VGL+ LF +GN+HCSWCHYLSCVPTSKW C
Sbjct: 179 TISLLILVAGFIVGLISLFNNVDGNEHCSWCHYLSCVPTSKWSC 222
>gi|168067654|ref|XP_001785725.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662631|gb|EDQ49460.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 321
Score = 218 bits (555), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 136/310 (43%), Positives = 187/310 (60%), Gaps = 36/310 (11%)
Query: 26 SYYVEPGSDQQWTSWLIPMF----VVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRL 81
SYY P ++ + W P+F VVAN+ VFIV MY NNCP G + R+
Sbjct: 16 SYYAPPRKHEK-SHW--PIFTLVAVVANIIVFIVVMYENNCPAKIGPGRTCVLGSSFKRM 72
Query: 82 SFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVF 141
SF+P ENPL GPSS+TL K+G L VV + +GWRL++C+WLHAGV HLL NM++++
Sbjct: 73 SFQPWSENPLLGPSSATLVKMGGLRTVLVVDQKEGWRLMSCVWLHAGVFHLLVNMIAVLV 132
Query: 142 IGIRLEQQFGFVRVGFVYLLS------------------GFGGAYYLLFLFNAVSLLVL- 182
+G+ LE+ FGF+RVG +YL S G GA + L L +S +++
Sbjct: 133 LGLPLEKTFGFIRVGVLYLASGLGGSLLSSLFNQNGVSVGASGALFGL-LGGTISDVIIN 191
Query: 183 ------LAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
LL L+++ AINLA+G+LP VDNFAHIGGF+ G LLG VLL++ Q G+ R
Sbjct: 192 WSLYSNYCGVLLNLIILAAINLAIGLLPLVDNFAHIGGFLTGLLLGCVLLMKTQHGYVPR 251
Query: 237 HQL--PAQAR-VKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSC 293
L P R VK+R N +Q +L I++ ++LI GF G V L+ + + CSWCHYL+C
Sbjct: 252 RDLLDPNMERPVKNRFNAFQIILFIISALVLIAGFIGGFVALYNRVDAHKKCSWCHYLNC 311
Query: 294 VPTSKWKCGN 303
VP+S W C +
Sbjct: 312 VPSSHWTCDS 321
>gi|359492423|ref|XP_002284303.2| PREDICTED: uncharacterized rhomboid protein AN10929-like [Vitis
vinifera]
Length = 379
Score = 216 bits (549), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 182/305 (59%), Gaps = 32/305 (10%)
Query: 28 YVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLK 87
+ + G+ ++ SW+I +FVV ++ F M++N+C +N+ R C + LGRLSF+PL
Sbjct: 32 FFKSGTRKREDSWVISLFVVLHIVAFAATMFVNDCWQNS---HRDCAIKVLGRLSFQPLW 88
Query: 88 ENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
ENPL GPSSSTL ++GAL+ + + HQ WRL TC+WLHAG IHL+ N+ S++F+GI LE
Sbjct: 89 ENPLLGPSSSTLDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIINLSSVIFVGIHLE 148
Query: 148 QQFGFVRVGFVYLLSGFGGAYY-LLFLFNAV------SLLVLLAAALLTLVV-------- 192
Q+FG +R+G VY+LS F G+ LFL + +L LL + L L+
Sbjct: 149 QEFGPLRIGMVYILSAFFGSLVATLFLQKSPAVGSSGALFGLLGSMLSGLICNWKVYTDK 208
Query: 193 ---------IIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG-WAERH----Q 238
+ IN A+G+LP+VDNF+++GGF++G LLGFVLL P+ AE+
Sbjct: 209 LAALSALLLVAVINFALGLLPYVDNFSNLGGFISGVLLGFVLLFSPRLPRMAEKKGGFFD 268
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
+ ++ + + VL V+ VL + +V + G + N +CSWC Y++CVP+++
Sbjct: 269 YSVKKSIRLKQKLDRPVLRSVSFVLFGLVLAGAIVAVLHGIDMNKYCSWCQYINCVPSNR 328
Query: 299 WKCGN 303
W C
Sbjct: 329 WSCNT 333
>gi|302141893|emb|CBI19096.3| unnamed protein product [Vitis vinifera]
Length = 342
Score = 215 bits (548), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 119/305 (39%), Positives = 182/305 (59%), Gaps = 32/305 (10%)
Query: 28 YVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLK 87
+ + G+ ++ SW+I +FVV ++ F M++N+C +N+ R C + LGRLSF+PL
Sbjct: 32 FFKSGTRKREDSWVISLFVVLHIVAFAATMFVNDCWQNS---HRDCAIKVLGRLSFQPLW 88
Query: 88 ENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
ENPL GPSSSTL ++GAL+ + + HQ WRL TC+WLHAG IHL+ N+ S++F+GI LE
Sbjct: 89 ENPLLGPSSSTLDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIINLSSVIFVGIHLE 148
Query: 148 QQFGFVRVGFVYLLSGFGGAYY-LLFLFNAV------SLLVLLAAALLTLVV-------- 192
Q+FG +R+G VY+LS F G+ LFL + +L LL + L L+
Sbjct: 149 QEFGPLRIGMVYILSAFFGSLVATLFLQKSPAVGSSGALFGLLGSMLSGLICNWKVYTDK 208
Query: 193 ---------IIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG-WAERH----Q 238
+ IN A+G+LP+VDNF+++GGF++G LLGFVLL P+ AE+
Sbjct: 209 LAALSALLLVAVINFALGLLPYVDNFSNLGGFISGVLLGFVLLFSPRLPRMAEKKGGFFD 268
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
+ ++ + + VL V+ VL + +V + G + N +CSWC Y++CVP+++
Sbjct: 269 YSVKKSIRLKQKLDRPVLRSVSFVLFGLVLAGAIVAVLHGIDMNKYCSWCQYINCVPSNR 328
Query: 299 WKCGN 303
W C
Sbjct: 329 WSCNT 333
>gi|168027788|ref|XP_001766411.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682320|gb|EDQ68739.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 311
Score = 213 bits (542), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 126/307 (41%), Positives = 182/307 (59%), Gaps = 34/307 (11%)
Query: 28 YVEPGSDQQWTSWLIPMF----VVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSF 83
++ P + W P+F VVANV +FI+ MY NNCP N R CV R+SF
Sbjct: 5 HISPVRKRDRYYW--PIFTLAAVVANVIIFIIVMYDNNCPANIIPPDR-CVLGSFRRMSF 61
Query: 84 EPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIG 143
+P +NPL GPSS+TLQ++G L VV + QGWRL++C+WLHAGV HL+ NM +L+ G
Sbjct: 62 QPWNQNPLLGPSSATLQRMGGLMTFLVVDQQQGWRLMSCVWLHAGVFHLVINMTALLIFG 121
Query: 144 IRLEQQFGFVRVGFVYLLSGFG---------------GAYYLLFLFNAVSLLVLLA---- 184
I+LE++FG +RVG +YL+SG G GA LF +L L+
Sbjct: 122 IQLEKEFGIIRVGLLYLISGLGGGLLSTLFNSHAISVGASGALFGLAGATLAELITNWSH 181
Query: 185 -----AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQL 239
+ L+++ A+N ++G++P VDNFAHIGGF+ G LLGFVLL++ Q+G+ + L
Sbjct: 182 FHNRCSLTWQLIIVAAVNFSIGLMPRVDNFAHIGGFITGLLLGFVLLMKEQYGYVWQRDL 241
Query: 240 --PAQAR-VKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPT 296
P R +K R YQ VL + +++LLI GF G + L+ + N+ C WC ++CVP+
Sbjct: 242 VDPNIERPMKRRFKVYQIVLFVASILLLITGFIAGFIALYNNVDINEICRWCRRINCVPS 301
Query: 297 SKWKCGN 303
+W C +
Sbjct: 302 PRWSCNS 308
>gi|332148745|dbj|BAK20219.1| Rhomboid family KOMPEITO [Arabidopsis thaliana]
Length = 385
Score = 209 bits (532), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 180/332 (54%), Gaps = 41/332 (12%)
Query: 7 ERGKNISNNNNNRG--SYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
E N+S +N G S+ S++ + +WL+ +FV+ + +F V M +N+C
Sbjct: 14 EISHNLSFTTSNAGDSSWDKISFFRHRSRQIKRDTWLVSVFVLLQIVLFAVTMGVNDCSG 73
Query: 65 NNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIW 124
N+ C A+ LGR SF+ L ENP+ GPS+STL+ +G L W + H+ WR++T W
Sbjct: 74 NS---HGHCSAKLLGRFSFQSLSENPMLGPSASTLEHMGGLSWKALTENHEIWRILTSPW 130
Query: 125 LHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS----- 178
LH+G+ HL N+ SL+F+GI +EQQFG +R+ +Y LSG G+ + +LF+ N S
Sbjct: 131 LHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYFLSGIMGSLFAVLFVRNIPSISSGA 190
Query: 179 --------LLVLLA----------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFL 220
+L LA +AL + I +N +G LP +DNFA+IGGF++GFL
Sbjct: 191 AFFGLIGAMLSALAKNWNLYNSKISALAIIFTIFTVNFLIGFLPFIDNFANIGGFISGFL 250
Query: 221 LGFVLLLRPQF--------GWAERHQLPAQARVKSRHN-PYQYVLCIVALVLLIVGFTVG 271
LGFVLL +PQ G + R+K + + P ++C++ ++ G
Sbjct: 251 LGFVLLFKPQLRQMPPSHKGKLFEDDMNRSTRLKEQFDRPVLRIICLLVFCGILAGV--- 307
Query: 272 LVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L+ G N N HC WC Y+ CVPT KW C +
Sbjct: 308 LLAACWGVNLNRHCHWCRYVDCVPTKKWSCSD 339
>gi|145337690|ref|NP_177909.2| Rhomboid-related intramembrane serine protease family protein
[Arabidopsis thaliana]
gi|332197915|gb|AEE36036.1| Rhomboid-related intramembrane serine protease family protein
[Arabidopsis thaliana]
Length = 351
Score = 209 bits (531), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 119/332 (35%), Positives = 180/332 (54%), Gaps = 41/332 (12%)
Query: 7 ERGKNISNNNNNRG--SYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
E N+S +N G S+ S++ + +WL+ +FV+ + +F V M +N+C
Sbjct: 14 EISHNLSFTTSNAGDSSWDKISFFRHRSRQIKRDTWLVSVFVLLQIVLFAVTMGVNDCSG 73
Query: 65 NNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIW 124
N+ C A+ LGR SF+ L ENP+ GPS+STL+ +G L W + H+ WR++T W
Sbjct: 74 NS---HGHCSAKLLGRFSFQSLSENPMLGPSASTLEHMGGLSWKALTENHEIWRILTSPW 130
Query: 125 LHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS----- 178
LH+G+ HL N+ SL+F+GI +EQQFG +R+ +Y LSG G+ + +LF+ N S
Sbjct: 131 LHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYFLSGIMGSLFAVLFVRNIPSISSGA 190
Query: 179 --------LLVLLA----------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFL 220
+L LA +AL + I +N +G LP +DNFA+IGGF++GFL
Sbjct: 191 AFFGLIGAMLSALAKNWNLYNSKISALAIIFTIFTVNFLIGFLPFIDNFANIGGFISGFL 250
Query: 221 LGFVLLLRPQF--------GWAERHQLPAQARVKSRHN-PYQYVLCIVALVLLIVGFTVG 271
LGFVLL +PQ G + R+K + + P ++C++ ++ G
Sbjct: 251 LGFVLLFKPQLRQMPPSHKGKLFEDDMNRSTRLKEQFDRPVLRIICLLVFCGILAGV--- 307
Query: 272 LVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L+ G N N HC WC Y+ CVPT KW C +
Sbjct: 308 LLAACWGVNLNRHCHWCRYVDCVPTKKWSCSD 339
>gi|168024910|ref|XP_001764978.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683787|gb|EDQ70194.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 383
Score = 207 bits (527), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 116/300 (38%), Positives = 173/300 (57%), Gaps = 32/300 (10%)
Query: 34 DQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRG-CVARFLGRLSFEPLKENPLF 92
++ TSWLIP + ++ FI+ M NNC + GG C+ F+ R F+PL ENPL
Sbjct: 33 ERGQTSWLIPALALIHLIAFILVMSHNNCDRKGSNGGENVCIFNFVRRFPFQPLSENPLL 92
Query: 93 GPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 152
GPS+ +L GALE + V +GWR++T + LHAG+ HL+ N+ L ++G++LE++FGF
Sbjct: 93 GPSAISLLDFGALESELVGRAGEGWRMLTTLSLHAGIFHLVGNLAGLFYVGLQLEREFGF 152
Query: 153 VRVGFVYLLSGFGGAY-YLLFLFNAVSL------LVLLAAALLTLVV-----------II 194
++V +Y L+GF GA +LF+ VS+ + L+ A L +V+ I+
Sbjct: 153 LKVMLIYYLAGFAGALASVLFMHGRVSVGASGATMGLIGARLAEVVMNWNVSKHRTRSIV 212
Query: 195 AIN------LAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ-LPA------ 241
+ + L G+LP +DNF H+GGF+ G LLG VLL+RPQ W Q PA
Sbjct: 213 STSFFLVGTLVYGLLPLMDNFMHLGGFLTGSLLGNVLLIRPQAEWVNYEQCFPAVVYDVD 272
Query: 242 QARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+S+H+ Q VL IV+L +L+ G+ L+ G + CSWCHY++C+PT WKC
Sbjct: 273 DLPARSKHSRGQKVLWIVSLNILVAGYIAAAFALYTGMDARRRCSWCHYMACIPTDLWKC 332
>gi|302782782|ref|XP_002973164.1| hypothetical protein SELMODRAFT_98870 [Selaginella moellendorffii]
gi|300158917|gb|EFJ25538.1| hypothetical protein SELMODRAFT_98870 [Selaginella moellendorffii]
Length = 286
Score = 201 bits (512), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 128/280 (45%), Positives = 180/280 (64%), Gaps = 32/280 (11%)
Query: 41 LIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQ 100
++P+FV+AN+ VFI+ MY N+CP + E C+ L R SF+PL +NPL GPSS+TL
Sbjct: 7 IVPIFVIANIVVFIITMYRNDCPAHQTE--YRCILPGLKRFSFQPLSQNPLLGPSSNTLL 64
Query: 101 KLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYL 160
++GALE + V +GWRL++CIWLHAGV HLL NML L+ +G+++EQ+FGF+++GFVYL
Sbjct: 65 RMGALESELVTSGREGWRLVSCIWLHAGVFHLLLNMLGLLTLGLQMEQEFGFLKLGFVYL 124
Query: 161 LSGFGGAYY-LLFLFNAVSL-----LVLLAAALLT------------------LVVIIAI 196
++GFGG+ LFL +S+ L L ALL+ LVV+ I
Sbjct: 125 IAGFGGSLLSALFLRLTISVGASGALFGLMGALLSELLINWSHHERSWFTLSQLVVLFII 184
Query: 197 NLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA-----RVKSRHNP 251
NLA+G +PHVDN+AH+GG ++G LLGF+LL RP W + LP Q R+ S
Sbjct: 185 NLALGKMPHVDNYAHLGGCISGILLGFILLQRPPLTWPTQPHLPYQPPSRPWRIYSLPK- 243
Query: 252 YQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYL 291
Y++V+ ++AL LL+V + V L+MLFRG + C WC L
Sbjct: 244 YKFVIWVIALNLLVVLYVVALIMLFRGVDVRKKCKWCRQL 283
>gi|255545576|ref|XP_002513848.1| KOM, putative [Ricinus communis]
gi|223546934|gb|EEF48431.1| KOM, putative [Ricinus communis]
Length = 389
Score = 200 bits (509), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 124/336 (36%), Positives = 187/336 (55%), Gaps = 50/336 (14%)
Query: 11 NISNNNNN-RGSYSSGSYYVEPGSDQQWT----------SWLIPMFVVANVAVFIVAMYI 59
N+S+NN N ++SS S + + D T +WLI +FV+ ++ FI M +
Sbjct: 15 NLSDNNKNINQTFSSFSDFADSLQDPNKTPFFKSRRRRDTWLISIFVIIHLGAFIATMIV 74
Query: 60 NNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRL 119
N+C N++ C + LGRLSF+PL ENPL GPS+STL K+GAL V+ EHQ WRL
Sbjct: 75 NDCSTNSYGD---CAIKTLGRLSFQPLSENPLLGPSASTLDKMGALRRTLVI-EHQTWRL 130
Query: 120 ITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL-LFLFNAV- 177
+C WLHAG+IHL+ +++ ++F+GI LEQ+FG +RVG +Y+LS F G+ LF+ ++
Sbjct: 131 FSCPWLHAGLIHLIIDLIGVIFLGIYLEQEFGPLRVGIIYILSAFFGSLVTALFVRDSPV 190
Query: 178 -----SLLVLLAAALLTLV-----------------VIIAINLAVGILPHVDNFAHIGGF 215
+ L LL A LV + A N+ +G+LP+ DN+++IGG
Sbjct: 191 VSSSGAQLGLLGATFSALVRNWKSHTNKVAAVLIHFFVFACNVMLGLLPYADNYSNIGGL 250
Query: 216 MAGFLLGFVLLLRPQFGWAERHQ-------LPAQARVKSR-HNPYQYVLCIVALVLLIVG 267
++GFLLGFVLL PQ + L + +K + P + ++ +L+VG
Sbjct: 251 ISGFLLGFVLLYTPQLRKLAPKKSGLYDDGLKSVLNLKQKLDRPVLRTVSLLLFSVLLVG 310
Query: 268 FTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
F LV +G N + +C WC Y C+P+ W C +
Sbjct: 311 F---LVAALQGINISHYCKWCGYFDCIPSKSWSCND 343
>gi|414886371|tpg|DAA62385.1| TPA: hypothetical protein ZEAMMB73_763535 [Zea mays]
Length = 211
Score = 199 bits (506), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/145 (64%), Positives = 121/145 (83%), Gaps = 2/145 (1%)
Query: 33 SDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLF 92
+++W WL+P +VA +AVF+V MY NNCPK+ + G CVA FL R SF+PL+ENPL
Sbjct: 31 EERKWWPWLVPTVIVACIAVFVVEMYENNCPKHGSQLGD-CVAGFLRRFSFQPLRENPLL 89
Query: 93 GPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 152
GPSSSTL+K+GAL+W+++VH++QGWRLI+CIWLHAG+IHL+ NMLSL+FIGIRLEQQFGF
Sbjct: 90 GPSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQFGF 149
Query: 153 VRVGFVYLLSGFGGAYY-LLFLFNA 176
VR+G +YLLSGFGG+ LFL N+
Sbjct: 150 VRIGAIYLLSGFGGSVLSALFLRNS 174
>gi|147766525|emb|CAN76609.1| hypothetical protein VITISV_039487 [Vitis vinifera]
Length = 448
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/291 (38%), Positives = 174/291 (59%), Gaps = 21/291 (7%)
Query: 28 YVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLK 87
+ + G+ ++ SW+I +FVV ++ F M++N+C +N+ R C + LGRLSF+PL
Sbjct: 32 FFKSGTRKREDSWVISLFVVLHIVAFAATMFVNDCWQNS---HRDCAIKVLGRLSFQPLW 88
Query: 88 ENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
ENPL GPSSSTL ++GAL+ + + HQ WRL TC+WLHAG IHL+ N+ S++F+GI LE
Sbjct: 89 ENPLLGPSSSTLDEMGALQQTFLANHHQTWRLFTCLWLHAGAIHLIINLSSVIFVGIHLE 148
Query: 148 QQFGFVRVGFVYLLSGFGGAYYLLFLFNAV--------SLLVLLAAALLTLVVIIAINLA 199
Q+FG + F+ G + L L ++ + AAL L+++ IN A
Sbjct: 149 QEFGPPXL-FLQKSPAVGSSGALFGLLGSMLSGLICNWKVYTDKLAALSALLLVAVINFA 207
Query: 200 VGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF-------GWAERHQLPAQARVKSRHNPY 252
+G+LP+VDNF+++GGF++G LLGFVLL P+ G + + R+ + +
Sbjct: 208 LGLLPYVDNFSNLGGFISGVLLGFVLLFSPRLPRMXEKKGGFFDYXVKKSXRLXQKLD-- 265
Query: 253 QYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ VL V+ VL + +V + G + N +CSWC Y++CVP+++W C
Sbjct: 266 RPVLRSVSFVLFGLVLAGAIVAVLHGIDMNKYCSWCQYINCVPSNRWSCNT 316
>gi|356518507|ref|XP_003527920.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 373
Score = 194 bits (494), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 114/297 (38%), Positives = 165/297 (55%), Gaps = 36/297 (12%)
Query: 39 SWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRG-CVARFLGRLSFEPLKENPLFGPSSS 97
+W++ +FV+ + VFI M +N+C W G CV + LGR SF+PL ENPL GPS S
Sbjct: 36 TWVVSVFVIIQIGVFIATMLVNDC----WNNSHGDCVLQALGRFSFQPLPENPLLGPSQS 91
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
L ++GAL + HQ WRL T +LHAGV HLL N+ S++++G+ LE FG +R+G
Sbjct: 92 KLDEMGALRRSLLTEHHQTWRLFTFPFLHAGVFHLLLNLSSVIYVGVSLEHHFGPIRIGI 151
Query: 158 VYLLSGFGGAYYL-LFLFNAVS----------LLVLLA-------------AALLTLVVI 193
+Y LS F G+ LFL N + L LL+ +A+ +LV +
Sbjct: 152 IYALSAFVGSLVASLFLQNMPAVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFV 211
Query: 194 IAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF-------GWAERHQLPAQARVK 246
N +G LP+VDNFA IGGF++GFLLG V LL PQ G + + + ++K
Sbjct: 212 FVCNFVLGFLPYVDNFASIGGFISGFLLGSVFLLSPQLQPVAPNKGGLIDYGVKSCIKLK 271
Query: 247 SRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ + VL IV+L+L + LV + G N N +C+WC Y+ C+P + W C +
Sbjct: 272 LKQKLDRPVLRIVSLILFSLLLAGCLVAVLHGININSYCTWCPYVDCIPFTSWHCKD 328
>gi|356507686|ref|XP_003522595.1| PREDICTED: inactive rhomboid protein 1-like [Glycine max]
Length = 368
Score = 194 bits (492), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 167/297 (56%), Gaps = 36/297 (12%)
Query: 39 SWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRG-CVARFLGRLSFEPLKENPLFGPSSS 97
+W++ +FV+ + VFI M +N+C W G CV + LGR SF+PL ENPL GPS S
Sbjct: 31 TWVVSVFVIIQIGVFIATMLVNDC----WNNSHGDCVLQPLGRFSFQPLPENPLLGPSQS 86
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
L ++GAL W+ + HQ WRL T +LHAG+ HLL N+ S++++G+ LE FG +R+G
Sbjct: 87 KLDEMGALRWNLLTEHHQTWRLFTFPFLHAGLFHLLLNLSSVIYVGVNLEHHFGPIRIGI 146
Query: 158 VYLLSGFGGAYYL-LFLFNAVS----------LLVLLA-------------AALLTLVVI 193
+Y LS F G+ LFL N + L LL+ +A+ +LV +
Sbjct: 147 IYALSAFVGSLVASLFLQNIPAVGASGALYGLLGTLLSELVWNWKFHSNKISAIASLVFV 206
Query: 194 IAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF-------GWAERHQLPAQARVK 246
N +G LP+VDNFA +GGF++GFLLG V LL PQ G + + + ++K
Sbjct: 207 FVCNFVLGFLPYVDNFASMGGFISGFLLGSVFLLCPQIQPVAPNKGGLIDYGVKSYVKLK 266
Query: 247 SRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ + VL IV+L+L + LV + G N + +C+WC Y+ C+P + W C +
Sbjct: 267 LKEKLDRPVLRIVSLILFSLLLAGCLVAVLHGINISSYCTWCPYVDCIPFTSWHCKD 323
>gi|168040858|ref|XP_001772910.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675821|gb|EDQ62312.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 364
Score = 188 bits (477), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 112/297 (37%), Positives = 161/297 (54%), Gaps = 40/297 (13%)
Query: 42 IPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQK 101
+P+ ++ N+ VFI+ MY NNCP ++ + GR CV ++ +SF+P ENP+ GP ++ + K
Sbjct: 64 VPVIMIGNIVVFIMMMYYNNCP-DHIQPGRKCVGAWMKPMSFQPWDENPMLGPRAAAILK 122
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
G L V + QGWRL++ I L+ GV L+AN+ +L+ +G+R+E F F RV +Y
Sbjct: 123 WGGLLSSLVTDKGQGWRLVSSIALNGGVFQLIANLTALLGVGLRIETYFWFTRVAIIYAT 182
Query: 162 SGFGGAYYLLFLFNAVSLLVLLAAALLTLV-------------------------VIIAI 196
SGFGG L LF + V +AA++ L+ + I
Sbjct: 183 SGFGGN-VLSTLFIQDQVFVSASAAVMGLIGASLADVLTNWDMTEWKLLKLTDLLLFSLI 241
Query: 197 NLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE-RH-----------QLPAQAR 244
+L G++P VDNFA+ GGF GF LGFVLL+RPQ G+ + RH Q P
Sbjct: 242 SLGFGLMPQVDNFANAGGFFTGFCLGFVLLMRPQRGFKDTRHLSQLEAFIVNSQDPDLPP 301
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
VK HN Q + I+A +++I G V+LF N CSWC Y +CVP KW C
Sbjct: 302 VK-MHNKKQRSMQILASIVVIGLLAAGTVVLFINMKVNKGCSWCRYAACVPDLKWTC 357
>gi|357461731|ref|XP_003601147.1| Rhomboid family member [Medicago truncatula]
gi|355490195|gb|AES71398.1| Rhomboid family member [Medicago truncatula]
Length = 332
Score = 182 bits (463), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 110/289 (38%), Positives = 159/289 (55%), Gaps = 34/289 (11%)
Query: 46 VVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGAL 105
V+ + FI M +N+C N+ C LGR SF+PL ENPL GPS S L ++GAL
Sbjct: 2 VLIQLGFFIATMLVNDCFTNS---HGDCTFPSLGRFSFQPLAENPLLGPSMSKLDEMGAL 58
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+ + + HQ WRL T +LHAG+ HL+ N+ S++++GIRLEQ+FG +R+G VY+LS F
Sbjct: 59 QKNFLTERHQTWRLFTFPFLHAGLFHLVINLCSVIYVGIRLEQEFGPLRIGIVYILSAFV 118
Query: 166 GAYYL-LFLFN----------------AVSLLV-------LLAAALLTLVVIIAINLAVG 201
GA LFL N +S LV + + + V I N +G
Sbjct: 119 GALMASLFLQNIPVVGSSGALFGLLGALLSELVWNWKYHTKKISEVASFVFIFVCNFLLG 178
Query: 202 ILPHVDNFAHIGGFMAGFLLGFVLLLRPQF-------GWAERHQLPAQARVKSRHNPYQY 254
LP+VDNF+ IGGF++GFLLG VLL PQF G + L + ++K + +
Sbjct: 179 FLPYVDNFSSIGGFISGFLLGTVLLFAPQFQQVTPSKGDQIDYDLKSYIKLKLKQKLDRP 238
Query: 255 VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
V IV+L+L + L+ + G N N +C+WC Y+ C+P + W C +
Sbjct: 239 VSRIVSLILFTLLLAGCLLAVLYGININSYCTWCPYVDCIPFTSWHCKD 287
>gi|212275536|ref|NP_001130569.1| uncharacterized protein LOC100191668 [Zea mays]
gi|194689512|gb|ACF78840.1| unknown [Zea mays]
gi|414591380|tpg|DAA41951.1| TPA: hypothetical protein ZEAMMB73_621528 [Zea mays]
Length = 173
Score = 181 bits (460), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 82/126 (65%), Positives = 105/126 (83%)
Query: 30 EPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKEN 89
E D++W WL+P +VA +AVF+V MY NNCPKN + G CVA FL R SF+PL+EN
Sbjct: 30 EGEEDRKWWPWLVPTVIVACIAVFVVEMYENNCPKNRSQLGGDCVAGFLRRFSFQPLREN 89
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
PL GPSSSTL+K+GAL+W+++VH++QGWRLI+CIWLHAG+IHL+ NMLSL+FIGIRLEQQ
Sbjct: 90 PLLGPSSSTLEKMGALDWNKIVHQNQGWRLISCIWLHAGLIHLVVNMLSLLFIGIRLEQQ 149
Query: 150 FGFVRV 155
FGF ++
Sbjct: 150 FGFGKL 155
>gi|414867426|tpg|DAA45983.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 184
Score = 180 bits (456), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 120/176 (68%), Gaps = 25/176 (14%)
Query: 153 VRVGFVYLLSGFGGAYYL-LFLFNAVS------LLVLL-----------------AAALL 188
VRVG +YL+SG GG+ LF+ N +S L LL AAAL+
Sbjct: 9 VRVGIIYLVSGVGGSVLSSLFIRNNISVGASGALFGLLGAMLSELFTNWTIYANKAAALV 68
Query: 189 TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKS- 247
TL+V+IAINLA+GILPHVDNFAHIGGF+ GFLLGFVLL+RP +GW +R+ LP+ + +
Sbjct: 69 TLLVVIAINLAIGILPHVDNFAHIGGFLTGFLLGFVLLMRPHYGWMQRYALPSDVKYTTK 128
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
++ YQ+ L VA VL ++GF VGL MLFRG N NDHC WCHYLSCVPTS+W CG
Sbjct: 129 KYLAYQWALLAVASVLAVIGFAVGLGMLFRGVNANDHCGWCHYLSCVPTSRWSCGK 184
>gi|111278466|gb|ABH09088.1| putative membrane protein [Artemisia annua]
Length = 140
Score = 179 bits (453), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/120 (74%), Positives = 106/120 (88%)
Query: 184 AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
AAAL TL++II +NLAVG+LPHVDNFAHIGGF+ GFLLGFVLLLRPQF W ERH LP +A
Sbjct: 20 AAALFTLLIIILVNLAVGMLPHVDNFAHIGGFLTGFLLGFVLLLRPQFAWQERHNLPVEA 79
Query: 244 RVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
R +S++ YQYV +++L+LL+VGFTVGLVMLF+GENGN HCSWCHYLSCVPTS+W+C N
Sbjct: 80 RSRSKYTVYQYVFWLLSLILLVVGFTVGLVMLFKGENGNKHCSWCHYLSCVPTSRWRCDN 139
>gi|168001759|ref|XP_001753582.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162695461|gb|EDQ81805.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 362
Score = 177 bits (450), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 110/296 (37%), Positives = 163/296 (55%), Gaps = 38/296 (12%)
Query: 42 IPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQK 101
+P+ +V ++ VFI+ M N+CPK+ G + CV +L LSF+P ENP+ GP + K
Sbjct: 64 VPVIMVGSIVVFIMMMLYNDCPKHIAPGEK-CVGEWLKPLSFQPWDENPMLGPRWRAIMK 122
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
G +E V + +GWRL++ I ++ GV+ L+ N+++L+ +G+R+E F F +VG +Y +
Sbjct: 123 WGGVESSLVTKKKEGWRLLSSIAVNGGVLQLIMNLIALLIVGLRMELYFWFFKVGIIYTM 182
Query: 162 SGFGGAYY-------LLFLFNAVSLLVLLAAA-----------------LLTLVVIIAIN 197
SGFGG LF+ + +LL L+ A+ + L+V I+
Sbjct: 183 SGFGGNVLSTLFIQNQLFVSASAALLGLIGASFADIFINWDVVERKALKFVDLIVFGLIS 242
Query: 198 LAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE-RH-----------QLPAQARV 245
G++P VDNFA++GG GF LGFV LLRPQ G+ + RH Q P V
Sbjct: 243 FGFGLMPQVDNFANVGGLFTGFCLGFVFLLRPQRGYKDTRHLSQLEAFIVNNQDPDLPPV 302
Query: 246 KSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
K HN Q V+ ++A +LL+ G V+LF N CSWCHY +CVP KW C
Sbjct: 303 KM-HNKRQRVMQLLAGLLLVGLLAAGTVLLFLEVKVNKGCSWCHYAACVPNLKWTC 357
>gi|413920155|gb|AFW60087.1| hypothetical protein ZEAMMB73_684125, partial [Zea mays]
Length = 191
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 84/160 (52%), Positives = 113/160 (70%), Gaps = 3/160 (1%)
Query: 8 RGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNW 67
R + S+ ++ R + ++W+ WL+ VA VA+F+V MY+N+CP +N
Sbjct: 25 RSHHHSDQSSTRSHHHQQVVIRARPYYRRWSPWLVSGATVACVAIFLVTMYVNDCPTHN- 83
Query: 68 EGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHA 127
A FLGR +F+PL+ENPL GPSS+TL K+GAL+ +VVH QGWRLITC+WLHA
Sbjct: 84 --SNCAAAGFLGRFAFQPLRENPLLGPSSATLVKMGALDVAKVVHGRQGWRLITCMWLHA 141
Query: 128 GVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
GV+HLL NML L+ +GIRLEQ+FGFVR+G VYL+SGFGG+
Sbjct: 142 GVVHLLINMLCLLVVGIRLEQEFGFVRIGLVYLISGFGGS 181
>gi|167999275|ref|XP_001752343.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162696738|gb|EDQ83076.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 340
Score = 175 bits (444), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/288 (34%), Positives = 151/288 (52%), Gaps = 29/288 (10%)
Query: 40 WLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTL 99
W+ F +A+ + IV M+ N+CP + C+ + + +P ENPL GPS+ TL
Sbjct: 5 WISMAFTIAHTVILIVTMHQNDCPSHTQTA---CLNPSFHKFAMQPFDENPLLGPSAKTL 61
Query: 100 QKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVY 159
LGALE D + +GWRL++ +WLHAGV+H+ ++ +GI LE+Q GFV+VG VY
Sbjct: 62 LSLGALESDLITKSREGWRLLSAMWLHAGVLHIAGTASGMLLLGIPLERQLGFVKVGVVY 121
Query: 160 LLSGF-GGAYYLLFLFNAVSL------LVLLAAALLTLVV-----------------IIA 195
+LSGF G L + VS+ + LL A L +++V A
Sbjct: 122 ILSGFLGSVISALMVHGRVSVGASGAFMGLLGATLSSIIVNWKSYRHRSRALMGVMFFTA 181
Query: 196 INLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG-WAERHQLPAQARVKSRHNPYQY 254
+N G++P DNF HIGG + GFL+G + ++ F W + R N
Sbjct: 182 LNAVFGLMPLADNFMHIGGAVMGFLIGNLFFIKQNFRCWKSSMVYDRNDMLAKRKNIIIL 241
Query: 255 -VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ ++++ LI T+GL LF G ++ CSWC YL+C P+ WKC
Sbjct: 242 DIVWLLSIGALIAASTMGLFALFSGMEISNGCSWCQYLTCAPSKFWKC 289
>gi|293334937|ref|NP_001169173.1| hypothetical protein [Zea mays]
gi|223975303|gb|ACN31839.1| unknown [Zea mays]
gi|414864371|tpg|DAA42928.1| TPA: hypothetical protein ZEAMMB73_077306 [Zea mays]
gi|414864372|tpg|DAA42929.1| TPA: hypothetical protein ZEAMMB73_077306 [Zea mays]
Length = 148
Score = 174 bits (441), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/153 (54%), Positives = 108/153 (70%), Gaps = 7/153 (4%)
Query: 2 ASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINN 61
D+E+G G S Y G +++W WL+P+ VA++ VF+V MY NN
Sbjct: 3 TRADVEKG---GPARKEPGKVPSPLYPQHEG-EREWVPWLVPVIFVASITVFVVTMYANN 58
Query: 62 CPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLIT 121
CP + CVARFLGR SF+PL++NPLFGPSS+TL K+GAL W++VVH HQGWRL++
Sbjct: 59 CPARD---TNKCVARFLGRFSFQPLRQNPLFGPSSATLTKMGALVWEKVVHRHQGWRLLS 115
Query: 122 CIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+WLHAGVIHL+ANML L+FIG+RLEQQFG+ R
Sbjct: 116 SMWLHAGVIHLVANMLCLLFIGMRLEQQFGYGR 148
>gi|449466454|ref|XP_004150941.1| PREDICTED: inactive rhomboid protein 1-like, partial [Cucumis
sativus]
Length = 374
Score = 173 bits (438), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 114/341 (33%), Positives = 173/341 (50%), Gaps = 51/341 (14%)
Query: 1 MASGDLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYIN 60
MASG + +I N + S P D + ++ +FV+ ++ FI M +N
Sbjct: 1 MASGASDFKMHIPKNLDELKIPFFKSSSRRPRGD----TCVVSVFVLLHIVAFIAMMLVN 56
Query: 61 NCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLI 120
+C N+ + C LGR+SF+PL ENPL GPS+STL+K+G L+ + Q WRL
Sbjct: 57 DCWSNSHQD---CAFGVLGRMSFQPLAENPLLGPSASTLEKMGGLQRKSLTEYRQIWRLF 113
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS- 178
T +HAG+IHL+ N+ S++F+GI+LE ++G VR G +YLLS + G LF N+ S
Sbjct: 114 TFPCMHAGLIHLVINLGSVIFVGIQLELEYGPVRTGIIYLLSAYTGTLVAALFAQNSPSV 173
Query: 179 -----LLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIGGFM 216
L LL A AL +++ + AIN +G+LP++DNFA++GG +
Sbjct: 174 GSSGALFGLLGAMISGIIRNWKLYTDRFLALGSVLAVFAINFGLGLLPYIDNFANVGGLV 233
Query: 217 AGFLLGFVLLLRPQ--------------FGWAERHQLPAQARVKSRHNPYQYVLCIVALV 262
AG LLGF++L Q +G+ L + ++ P +
Sbjct: 234 AGVLLGFIILFTLQDRQEKAQTKGYSLSYGFKNYFNLEMKQKLD---KPILRCTSLFLFA 290
Query: 263 LLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
LL G +G+ F + N +C WC Y+ CVP KW C +
Sbjct: 291 LLFCGSLIGVAFEF---DLNQYCIWCRYIDCVPFMKWHCKD 328
>gi|449522305|ref|XP_004168167.1| PREDICTED: inactive rhomboid protein 1-like, partial [Cucumis
sativus]
Length = 380
Score = 172 bits (435), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 105/303 (34%), Positives = 161/303 (53%), Gaps = 47/303 (15%)
Query: 39 SWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSST 98
+ ++ +FV+ ++ FI M +N+C N+ + C LGR+SF+PL ENPL GPS+ST
Sbjct: 62 TCVVSVFVLLHIVAFIAMMLVNDCWSNSHQD---CAFGVLGRMSFQPLAENPLLGPSAST 118
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L+K+G L+ + Q WRL T +HAG+IHL+ N+ S++F+GI+LE ++G VR G +
Sbjct: 119 LEKMGGLQRKSLTEYRQIWRLFTFPCMHAGLIHLVINLGSVIFVGIQLELEYGPVRTGII 178
Query: 159 YLLSGFGGAYY-LLFLFNAVS------LLVLLAA-----------------ALLTLVVII 194
YLLS + G LF N+ S L LL A AL +++ +
Sbjct: 179 YLLSAYTGTLVAALFAQNSPSVGSSGALFGLLGAMISGIIRNWKLYTDRFLALGSVLAVF 238
Query: 195 AINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQ--------------FGWAERHQLP 240
AIN +G+LP++DNFA++GG +AG LLGF++L Q +G+ L
Sbjct: 239 AINFGLGLLPYIDNFANVGGLVAGVLLGFIILFTLQDRQEKAQTKGYSLSYGFKNYFNLE 298
Query: 241 AQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWK 300
+ ++ P + LL G +G+ F + N +C WC Y+ CVP KW
Sbjct: 299 MKQKLD---KPILRCTSLFLFALLFCGSLIGVAFEF---DLNQYCIWCRYIDCVPFMKWH 352
Query: 301 CGN 303
C +
Sbjct: 353 CKD 355
>gi|357455203|ref|XP_003597882.1| hypothetical protein MTR_2g103600 [Medicago truncatula]
gi|355486930|gb|AES68133.1| hypothetical protein MTR_2g103600 [Medicago truncatula]
Length = 345
Score = 167 bits (422), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 78/133 (58%), Positives = 105/133 (78%), Gaps = 3/133 (2%)
Query: 36 QWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCV-ARFLGRLSFEPLKENPLFGP 94
QW SWL+P+F +AN+A+F+ +MYIN+CP + C+ ++LG+ SF+P ENPL GP
Sbjct: 30 QWFSWLVPLFFLANIAMFVYSMYINDCP--GYLNEDDCLWYQYLGKFSFQPFNENPLLGP 87
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S TL+ LGALE D VV E++ WR ITC++LHAGVIHLLANM SL+FIG+RLE +FGF++
Sbjct: 88 SVRTLRVLGALERDLVVGENEVWRFITCMFLHAGVIHLLANMFSLLFIGVRLENEFGFLK 147
Query: 155 VGFVYLLSGFGGA 167
+G +YLLSGFGG+
Sbjct: 148 IGVLYLLSGFGGS 160
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 51/105 (48%), Positives = 76/105 (72%), Gaps = 3/105 (2%)
Query: 185 AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA--Q 242
AAL +L++II +NLAVG +PHVDN AHIGGF++GF LGFV+L+RPQFG+ +P
Sbjct: 236 AALTSLLLIIGLNLAVGFIPHVDNSAHIGGFLSGFFLGFVILMRPQFGYVNNKYIPPGYD 295
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSW 287
A+ KS++ YQY +++++ L++G+ GL L+ GE+ ND S+
Sbjct: 296 AKRKSKYKGYQYFFLVLSVITLLIGYAYGLATLYIGES-NDVFSY 339
>gi|6573780|gb|AAF17700.1|AC009243_27 F28K19.7 [Arabidopsis thaliana]
Length = 735
Score = 164 bits (416), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 105/353 (29%), Positives = 167/353 (47%), Gaps = 69/353 (19%)
Query: 7 ERGKNISNNNNNRG--SYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
E N+S +N G S+ S++ + +WL+ +FV+ + +F V M +N+C
Sbjct: 14 EISHNLSFTTSNAGDSSWDKISFFRHRSRQIKRDTWLVSVFVLLQIVLFAVTMGVNDCSG 73
Query: 65 NNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIW 124
N+ + ++ L + S Q +G L W + H+ WR++T W
Sbjct: 74 NS----------HVSKIDEFQLIHSVSISDYSDNRQHMGGLSWKALTENHEIWRILTSPW 123
Query: 125 LHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVSL---- 179
LH+G+ HL N+ SL+F+GI +EQQFG +R+ +Y LSG G+ + +LF+ N S+
Sbjct: 124 LHSGLFHLFINLGSLIFVGIYMEQQFGPLRIAVIYFLSGIMGSLFAVLFVRNIPSISSGA 183
Query: 180 ------------------------------------LVLLA----AALLTLVVIIAINLA 199
L+L+A +AL + I +N
Sbjct: 184 AFFGLIGAMLSALAKNWNLYNSKVKDFLWFCFVSCYLLLIAFLIISALAIIFTIFTVNFL 243
Query: 200 VGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF--------GWAERHQLPAQARVKSRHN- 250
+G LP +DNFA+IGGF++GFLLGFVLL +PQ G + R+K + +
Sbjct: 244 IGFLPFIDNFANIGGFISGFLLGFVLLFKPQLRQMPPSHKGKLFEDDMNRSTRLKEQFDR 303
Query: 251 PYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
P ++C++ ++ G L+ G N N HC WC Y+ CVPT KW C +
Sbjct: 304 PVLRIICLLVFCGILAGV---LLAACWGVNLNRHCHWCRYVDCVPTKKWSCSD 353
>gi|413919341|gb|AFW59273.1| hypothetical protein ZEAMMB73_333041 [Zea mays]
Length = 273
Score = 163 bits (412), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 80/146 (54%), Positives = 108/146 (73%), Gaps = 10/146 (6%)
Query: 14 NNNNNRGSYSSGS-YYVEPGS---DQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEG 69
NN + G Y+ S +Y +P + W SWL+P+ V+ANV +F++ M+ NNCP++
Sbjct: 30 NNMTSNGPYTPPSPFYYDPAAAHGRHHW-SWLVPLVVIANVLMFVLVMFYNNCPRS---- 84
Query: 70 GRGCVAR-FLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAG 128
G CV R FL R SF+PLKENPL GP+++TLQ+ GAL+W +VVH +Q WRL +C WLHAG
Sbjct: 85 GGDCVGRGFLRRFSFQPLKENPLLGPTAATLQRYGALDWYKVVHGNQAWRLESCTWLHAG 144
Query: 129 VIHLLANMLSLVFIGIRLEQQFGFVR 154
+IHLLANM+SL+FIG+RLEQQFGF +
Sbjct: 145 LIHLLANMISLIFIGVRLEQQFGFCK 170
>gi|84468346|dbj|BAE71256.1| hypothetical protein [Trifolium pratense]
Length = 184
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 75/120 (62%), Positives = 91/120 (75%), Gaps = 3/120 (2%)
Query: 185 AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQ-- 242
AALLTLV+II +NLA+GILPHVDNFAHIGGF+ GFLLGFV L+RPQFGW + +
Sbjct: 17 AALLTLVIIIGVNLAIGILPHVDNFAHIGGFLTGFLLGFVFLIRPQFGWINQRYARVEYS 76
Query: 243 -ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
R K + YQ +L +++L++LIVG +VGL L RG + N HCSWCHYLSCVPTSKW C
Sbjct: 77 PTRAKPKFKKYQCILWVLSLIILIVGLSVGLDALLRGVDANKHCSWCHYLSCVPTSKWSC 136
>gi|388506462|gb|AFK41297.1| unknown [Lotus japonicus]
Length = 136
Score = 161 bits (407), Expect = 4e-37, Method: Compositional matrix adjust.
Identities = 82/118 (69%), Positives = 97/118 (82%)
Query: 186 ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
ALLTL+VII INLA+GILPHVDNFAHIGGF+ G LLGF+LL RPQFGW E+ LPA R+
Sbjct: 18 ALLTLLVIIVINLAIGILPHVDNFAHIGGFLVGLLLGFILLPRPQFGWLEQRHLPAGVRL 77
Query: 246 KSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
KS++ YQYVL I +L+LL+ G TV LVML RGENGNDHC WC Y++ VPTSKW+C +
Sbjct: 78 KSKYKAYQYVLLIASLILLVAGLTVALVMLLRGENGNDHCHWCRYITSVPTSKWECSD 135
>gi|357142169|ref|XP_003572481.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Brachypodium distachyon]
Length = 239
Score = 160 bits (404), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 118/190 (62%), Gaps = 31/190 (16%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV--- 153
S L+K+GAL+W +V H+HQGW LI+CIWLHAG+I L NML L+FIGI LEQ FGFV
Sbjct: 19 SCLEKMGALDWAKVFHQHQGWHLISCIWLHAGLIRLFVNMLXLLFIGIHLEQXFGFVVSL 78
Query: 154 --RVGFVYLLSGFGGAYYLLFLFN---------AVSLLVLLA----------------AA 186
G +YLLSGFGG+ + L N A+ L +L+
Sbjct: 79 ARSHGIIYLLSGFGGSVQSVLLQNHYIFVGASGALXLCSMLSDLIVKWTVYSNKVSSCPV 138
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVK 246
++TL+ I+ INLA+ I+PH D FA IGGF+A F +GFVLL RP+FGW +RH+LP Q
Sbjct: 139 IITLLFIVLINLAIXIVPHADXFACIGGFVARFFVGFVLLARPKFGWMKRHELP-QTNQP 197
Query: 247 SRHNPYQYVL 256
++ QYVL
Sbjct: 198 PKYKTXQYVL 207
>gi|255586755|ref|XP_002533997.1| KOM, putative [Ricinus communis]
gi|223526008|gb|EEF28386.1| KOM, putative [Ricinus communis]
Length = 229
Score = 152 bits (385), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 119/176 (67%), Gaps = 27/176 (15%)
Query: 153 VRVGFVYLLSGFGGAYYL-LFLFNAVS------LLVLLAA-----------------ALL 188
V++G +Y++SGFGG+ LF+ +S L LL A A +
Sbjct: 6 VKIGLLYVISGFGGSLMSSLFIQTNISVGASGALFGLLGAMLSELITNWTIYTNKVAAFV 65
Query: 189 TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARV 245
TL++IIAINLAVGILPHVDNFAHIGGF++GFLLGFV L+RPQFGW + +P + A V
Sbjct: 66 TLLIIIAINLAVGILPHVDNFAHIGGFLSGFLLGFVFLIRPQFGWVSQRYVPPGYSPASV 125
Query: 246 KSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
K + YQ +L I++L++++ G T+GLV+L RG + NDHCSWCHYLSCVPTS+W C
Sbjct: 126 KPKFKAYQRILWIISLIVVVAGLTLGLVLLLRGVDANDHCSWCHYLSCVPTSRWSC 181
>gi|224066895|ref|XP_002302267.1| predicted protein [Populus trichocarpa]
gi|222843993|gb|EEE81540.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 147 bits (372), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 97/311 (31%), Positives = 152/311 (48%), Gaps = 71/311 (22%)
Query: 45 FVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSS------- 97
FV+ ++ VF++ M +N+C N+ C + LGR+SF+PL ENP GPS+S
Sbjct: 59 FVIIHLVVFLITMAVNDCGYNS---HGDCAFKALGRMSFQPLLENPFLGPSASAPIFSPC 115
Query: 98 --------------------TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANML 137
+L K+GA+ ++ EHQ WRL C LHAGV H + N+L
Sbjct: 116 LRMSRPVYWKPNAVVDKTEESLDKMGAIR-KTLLAEHQTWRLFMCPLLHAGVFHFMINLL 174
Query: 138 SLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL-LFLFNAV------SLLVLL------- 183
++F+GI LE++FG +R G +Y+LS F G +F+ ++ +L LL
Sbjct: 175 CIIFLGIYLEKEFGSIRTGIIYMLSAFSGTLVTAIFVRDSPAVCSSGALFGLLGATVSAL 234
Query: 184 ----------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW 233
AALLTL + NL +G+LP++DN++ IG ++GFLLG VL P+
Sbjct: 235 TRNWKFYTNKVAALLTLFFVAGFNLMLGLLPYMDNYSSIGSMISGFLLGLVLFYTPKLRQ 294
Query: 234 AERHQLP-AQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLS 292
++++ + VKS N Q + V ++ F++ WC Y
Sbjct: 295 VAQNKIGLCEYGVKSSFNWKQKLDRPVLRSASLILFSL---------------LWCRYTD 339
Query: 293 CVPTSKWKCGN 303
C+P +W C +
Sbjct: 340 CIPYKRWSCND 350
>gi|54290319|dbj|BAD61123.1| putative membrane protein [Oryza sativa Japonica Group]
gi|54290396|dbj|BAD61266.1| putative membrane protein [Oryza sativa Japonica Group]
Length = 329
Score = 147 bits (370), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 120/171 (70%), Gaps = 15/171 (8%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGG-------------RGC-VARFLGR 80
++W +L+P FVV NVA+F+V MYIN+CP + G +GC + LGR
Sbjct: 67 RRWFPFLVPFFVVVNVALFVVTMYINDCPAHMQATGDAIGGDVGEGAASQGCWLEPELGR 126
Query: 81 LSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLV 140
+F+ KENPL GPSS+TL K+GALE +V ++H+GWRLITCIWLHAGV+H+LANMLSL+
Sbjct: 127 FAFQSYKENPLIGPSSATLLKMGALETSKVTNDHEGWRLITCIWLHAGVVHILANMLSLL 186
Query: 141 FIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLV 191
IGIRLE++FGF+R+G +Y++SG GG+ L LF ++ V + AL L+
Sbjct: 187 LIGIRLEKEFGFMRIGTLYVISGVGGS-LLSALFMVSNISVGASGALFGLL 236
>gi|215768970|dbj|BAH01199.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 204
Score = 141 bits (356), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 61/106 (57%), Positives = 80/106 (75%), Gaps = 3/106 (2%)
Query: 199 AVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARVKSRHNPYQYV 255
AVGILPHVDNFAH+GGF +GF LGFVLL+RPQFG+ + P KS++ YQ +
Sbjct: 50 AVGILPHVDNFAHLGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQII 109
Query: 256 LCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
L ++A ++LI GFT+G +++ +G N ++HCSWCHYLSCVPTSKW C
Sbjct: 110 LWVIATLILISGFTIGFILVLKGFNASEHCSWCHYLSCVPTSKWSC 155
>gi|356547428|ref|XP_003542114.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Glycine max]
Length = 258
Score = 131 bits (330), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 84/219 (38%), Positives = 126/219 (57%), Gaps = 53/219 (24%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L+ LGALE + V +++GWR +C++LHAGV+HLLANM L+FIGIRLE++FGF+++GF+
Sbjct: 14 LRPLGALEKNLVEDQNEGWRFFSCMFLHAGVVHLLANMFGLLFIGIRLEKEFGFLKIGFL 73
Query: 159 YLLSGFGGAYYLLFL-----------FNAVSLLVLLAAALLTLVVI-------------- 193
+LS FGG+ L FL +A S L L A+L+ ++
Sbjct: 74 CMLSDFGGS-LLSFLHLQESGVSTVSVDASSALFGLLGAMLSELLTNWSIYANKCLFVKR 132
Query: 194 ----------------IAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERH 237
+ +NLAVG LP VDN AHIGG +AG+ LGF+LL+RPQ+ +
Sbjct: 133 QILTHAYFSVLLLLIIVGLNLAVGFLPRVDNSAHIGGLLAGYFLGFILLMRPQYXY---- 188
Query: 238 QLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLF 276
V ++ YQY I+++++L++G+ GL L+
Sbjct: 189 -------VNXKYKWYQYFFLIMSVIILLLGYACGLAKLY 220
>gi|110289434|gb|ABB47903.2| Rhomboid family protein, expressed [Oryza sativa Japonica Group]
Length = 250
Score = 121 bits (303), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 55/79 (69%), Positives = 70/79 (88%), Gaps = 1/79 (1%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+GAL WD+VVHEHQGWRL+TCIWLHAGV+HLLANMLSLV IG+RLEQQFG++R+G +YL+
Sbjct: 1 MGALVWDKVVHEHQGWRLVTCIWLHAGVVHLLANMLSLVLIGLRLEQQFGYMRIGIIYLV 60
Query: 162 SGFGGAYY-LLFLFNAVSL 179
SG GG+ LF+ N++S+
Sbjct: 61 SGIGGSVLSSLFIRNSISV 79
>gi|299471469|emb|CBN79420.1| Protein secE/sec61-gamma protein; Rhomboid-like protein [Ectocarpus
siliculosus]
Length = 766
Score = 115 bits (288), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 74/236 (31%), Positives = 119/236 (50%), Gaps = 35/236 (14%)
Query: 84 EPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIG 143
E L+ENP +GPS TL + GA D +V WRLI+ ++LHAGV+H L NML + +G
Sbjct: 443 ESLEENPSYGPSVETLIEAGAKRTDLIVDNGDWWRLISPMFLHAGVVHFLFNMLGFLQVG 502
Query: 144 IRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALL--------------- 188
+E+ FG+ RV +YL+SG G + +F ++V + A+
Sbjct: 503 AMVERVFGWWRVASIYLVSGVFGT-IVSAIFVPTQVMVGASGAIFGVFGALWADLWQNWS 561
Query: 189 ----------TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
L ++ A+N+ +G++P +DNFAH GG + G +G LL+ ++ +
Sbjct: 562 VNQDRCRMFTVLFILTAVNIILGLMPFLDNFAHCGGMLMGLFMGLGLLV-------QKRE 614
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCV 294
R+ + YQ L +VA V + +GL +L+ + + C WC +SCV
Sbjct: 615 DDRGDRLNKKC--YQISLQLVAAVAVPTLMILGLSLLYGRSDPAEWCGWCENISCV 668
>gi|440797932|gb|ELR19006.1| peptidase, S54 family protein [Acanthamoeba castellanii str. Neff]
Length = 459
Score = 115 bits (287), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 97/301 (32%), Positives = 141/301 (46%), Gaps = 47/301 (15%)
Query: 13 SNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRG 72
SN++N GS P + W P+F++ A I + + W GG
Sbjct: 186 SNDHNMEGSDFWSDSSPAPALVAKPKYW--PVFILLVTAADIAGLILELA----WNGG-- 237
Query: 73 CVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHL 132
E ++NP FGP+S TL+ LGA ++ +++ WR T ++LH G++HL
Sbjct: 238 ----------VEDFQDNPFFGPTSETLKTLGAKWTLAILEKNEAWRFFTAMFLHVGIVHL 287
Query: 133 LANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAY-YLLFLFNAVSLLVLLAAALLTLV 191
L N+L +G LE+Q GF R+G +Y+LSGF G +FL N +++ AA L V
Sbjct: 288 LINILR---VGWTLERQIGFWRIGPIYILSGFAGNLASCIFLPNTITVGASGAAFGLAGV 344
Query: 192 VIIAINLAVGI-----------LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP 240
++ + L GI LP +DNFAHIGG + GFL G VLL P +H
Sbjct: 345 LVADLILNWGIVGLALALAVGLLPGLDNFAHIGGLVQGFLAGLVLL--PSLAARVKHCYR 402
Query: 241 AQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDH--CSWCHYLSCVPTSK 298
+ P I AL+L I GLV+++ N ND C C + C+P
Sbjct: 403 LLRWLIILLIP-----PINALLLAI-----GLVVVYYNVNPNDPTWCDVCTTIDCIPVLS 452
Query: 299 W 299
W
Sbjct: 453 W 453
>gi|224008324|ref|XP_002293121.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971247|gb|EED89582.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 257
Score = 114 bits (284), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 80/259 (30%), Positives = 121/259 (46%), Gaps = 52/259 (20%)
Query: 82 SFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVF 141
FEPL NP+ GPS+ TL +LGA E +V E++ WRL++ + LHAGVIH L NM +L +
Sbjct: 11 KFEPLSVNPMIGPSAETLLRLGAKESYLIVQENEIWRLVSPMVLHAGVIHFLLNMFALWY 70
Query: 142 IGIRLEQQFGFVRVGFVYLLSGFGGA---------------------------------Y 168
+G +EQ GF +++ GG +
Sbjct: 71 VGKAIEQIHGFFPAVVQFVVPAVGGTILSAIFLPEYITVGASGGIFGLIGACISDIVMNW 130
Query: 169 YLLF--LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGF--V 224
LLF N + + A L+ L + I +N VG+ P VDNF H+GG + GFL G +
Sbjct: 131 NLLFNEFVNERGVRLSHARVLVVLFLDIVVNCLVGLTPFVDNFTHLGGMILGFLCGLSTI 190
Query: 225 LLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCI---VALVLLIVGFTVGLVMLFRGENG 281
L+ P+F ER + Y++ L L++ + G V ++LF G+
Sbjct: 191 QLVSPRFFGDERQRF------------YKFKLLFFRSFGLLVSMAGIIVSSIVLFSGDGE 238
Query: 282 NDHCSWCHYLSCVPTSKWK 300
+ C+ C Y+SC+ W
Sbjct: 239 TNPCTSCTYMSCIAFPPWT 257
>gi|440793889|gb|ELR15060.1| peptidase, S54 family protein [Acanthamoeba castellanii str. Neff]
Length = 434
Score = 114 bits (284), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 78/236 (33%), Positives = 125/236 (52%), Gaps = 39/236 (16%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
FEP+ NP FGP + TL LGA + ++V +++ WR T I+LHAG+IHL N++
Sbjct: 203 FEPISVNPFFGPDAETLIALGAKDVPKIVEDYEVWRFFTPIFLHAGLIHLALNLI-FQLQ 261
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGG------------------------AYYLLFLFNAVS 178
LE+Q GFVRVG VY++SGFGG + +F S
Sbjct: 262 CFMLERQMGFVRVGLVYIVSGFGGNLASSLFLPRLISVGASGALFGLVGMIFVVIFRNWS 321
Query: 179 LLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
L+V L+ L +++AI+L +G+LP+VDNFAH+GG + G + +++ + G
Sbjct: 322 LVVSPCRNLVVLCIMVAISLFLGLLPNVDNFAHVGGLVTGLVASLIVVPSLKHG------ 375
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCV 294
++ P++ ++ VAL++L G +G+ LF + CS+C ++CV
Sbjct: 376 --------AKAGPFRLLVASVALLVLAAGLGLGVYALFEDVPLREWCSFCSLINCV 423
>gi|413920157|gb|AFW60089.1| hypothetical protein ZEAMMB73_222778 [Zea mays]
Length = 194
Score = 111 bits (277), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 60/119 (50%), Positives = 74/119 (62%), Gaps = 13/119 (10%)
Query: 197 NLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQL-------------PAQA 243
NLA+G+LP VDNFAHIGG ++GFLLGFV+ +RP W + Q P A
Sbjct: 29 NLALGLLPRVDNFAHIGGLVSGFLLGFVVFVRPHLDWLTQQQRSGGGGQGQQQAPPPVAA 88
Query: 244 RVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCG 302
K +H YQYVL + A LL+ G T V+LFRG + N HC WCHYLSCVPT +W+C
Sbjct: 89 ARKRKHRTYQYVLWLAAAALLVAGLTAATVLLFRGYDANQHCPWCHYLSCVPTRRWRCD 147
>gi|219109878|ref|XP_002176692.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411227|gb|EEC51155.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 669
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/271 (30%), Positives = 127/271 (46%), Gaps = 53/271 (19%)
Query: 73 CVARFLGRL-----SFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHA 127
C A + + + E L ENP+ GPS++TL ++GA + +VH +GWRL+T LHA
Sbjct: 341 CTANMIASIAANDWTVESLDENPMIGPSAATLIRMGAKDSYLIVHAGEGWRLLTSTILHA 400
Query: 128 GVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL-----------LF 172
G++H NML+L F+G +E G++ ++ S GG A +L +F
Sbjct: 401 GLVHYFINMLALWFVGGAIEMSHGWISAMIIFSSSAIGGIILSAIFLPEFITVGASGGIF 460
Query: 173 LFNAVSLL------VLLAAALL---------TLVVI-----IAINLAVGILPHVDNFAHI 212
F L LL LL T+VV+ IA+N +G+ P+VDNF H+
Sbjct: 461 GFIGACLADIIMNWKLLFDGLLDENGKKHQHTMVVVVLLFDIALNSIIGLTPYVDNFTHL 520
Query: 213 GGFMAGFLLGFVLLLRPQ---FGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
GG GFL G + R FG E + A+ + + +++ +V
Sbjct: 521 GGMAYGFLCGLSTIERLSKDFFGLEESWMVRAK----------NFCVRFFGIIVTVVFIC 570
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSKWK 300
V ++L G+ C+ C +LSCVP W+
Sbjct: 571 VTAIILMGGDGVTTPCTNCSWLSCVPFPPWQ 601
>gi|223998534|ref|XP_002288940.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976048|gb|EED94376.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 239
Score = 108 bits (270), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 78/243 (32%), Positives = 116/243 (47%), Gaps = 36/243 (14%)
Query: 84 EPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIG 143
EPL NP+ GPS+ TL K+GA + +V++ + +RL + + LHAG+IH NM++L FIG
Sbjct: 7 EPLSVNPMIGPSAETLIKMGAKQTSLIVNQGEWYRLFSPMVLHAGLIHYFLNMMALWFIG 66
Query: 144 IRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVSL----------------------L 180
+EQ GF ++++ GG +FL +S+ L
Sbjct: 67 KAVEQCHGFAAAAIIFVIPAVGGTIMSAIFLPEYISVGASGGIFGLIGACIADICINWSL 126
Query: 181 VLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQ---FGWAERH 237
+ LL L+ I IN VG+ P VDNF H+GG + GFL G + R FG A
Sbjct: 127 LFSKHVLLWLLFDIVINCLVGLTPFVDNFTHLGGMVYGFLCGLSTIERLSTDFFGIATTF 186
Query: 238 QLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
+R++ ++ L+L +V V +L + G CS C Y+SCVP
Sbjct: 187 ----CSRLR------NVIVRFSGLILSVVLIMVTTALLVESDGGASPCSGCRYVSCVPFP 236
Query: 298 KWK 300
W
Sbjct: 237 PWA 239
>gi|219126391|ref|XP_002183442.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405198|gb|EEC45142.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 253
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 79/248 (31%), Positives = 134/248 (54%), Gaps = 41/248 (16%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGW-RLITCIWLHAGVIHLLANMLSLVF 141
FEP++ NP+FGPS+ TL K+GAL + +H+ Q W R+ I LHAG+IH + NML++
Sbjct: 12 FEPIRSNPMFGPSAETLIKMGAL-YAPYIHDEQEWFRIFVPIVLHAGIIHYVINMLAIGL 70
Query: 142 IGIRLEQQFGFVRVGFVYLLSGFGG-AYYLLFLFNAVS---------LLVL--------- 182
IG +E+ G+++ ++L+S GG L + +A+S LL L
Sbjct: 71 IGRSVERVHGWLKTALIFLISSVGGNIASALLMPSAISVGASGGIFGLLGLCLADVCANW 130
Query: 183 ---------------LAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLL 227
+ + ++ L+ +A+N+++G+ P++DNFAH+GGF+ GF G ++
Sbjct: 131 HVIQASRDDPSYSFPIRSVVVWLIFEVALNVSIGLTPYIDNFAHMGGFLYGFTFGLAIVQ 190
Query: 228 RPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSW 287
R G A ++ Q + R Y++ C + + LL++ T + + G++ + CSW
Sbjct: 191 RLG-GKAFYPKMEIQVH-RIRKTAYRF--CGLTVTLLLLALTSWKLWINDGDDPSP-CSW 245
Query: 288 CHYLSCVP 295
C YLSC P
Sbjct: 246 CRYLSCAP 253
>gi|328866134|gb|EGG14520.1| beta-lactamase family protein [Dictyostelium fasciculatum]
Length = 490
Score = 107 bits (267), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 90/297 (30%), Positives = 136/297 (45%), Gaps = 65/297 (21%)
Query: 30 EPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKEN 89
P QQ+T + I + + + + I + +N GG FEP K N
Sbjct: 226 PPAPPQQYTPYFIILVSIIDTCLLIWEIVLN--------GG------------FEPWKTN 265
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
P FGPS+STL +GA ++ ++ + WR + I+LH G+ HLL N+ + + IG++LE+
Sbjct: 266 PWFGPSASTLLNVGA-KYAPLILYGEWWRFFSPIFLHVGIFHLLMNLGTQLRIGMQLERS 324
Query: 150 FGFVRVGFVYLLSGFG---------------GAYYLLFLFNAVSLLVL------LAAALL 188
+G R+ +YLL G GA +F F V L L LA+ L
Sbjct: 325 YGAHRIVPIYLLCGVMGNLCSSIFLPLSVQVGASGSIFGFLGVLLADLARNWSALASPYL 384
Query: 189 ---TLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLL--LRPQFGWAERHQLPAQ 242
+LV I + AVG+ LP VDNFAH GGF+ G L G + L L P+ +R
Sbjct: 385 NCCSLVFTIITSFAVGLFLPGVDNFAHFGGFVMGILTGLIFLPSLTPKKAVGKR------ 438
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
L I+A+ + + F V+ +R + D C C Y++C+ W
Sbjct: 439 -----------LCLIIIAIPITVAAFIALFVVFYRQIDTKDWCPGCKYITCLEVLPW 484
>gi|125524408|gb|EAY72522.1| hypothetical protein OsI_00383 [Oryza sativa Indica Group]
Length = 265
Score = 103 bits (258), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 69/156 (44%), Positives = 96/156 (61%), Gaps = 27/156 (17%)
Query: 136 MLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLAAALL 188
MLSL+ IGIRLE++FGF+R+G +Y++SG GG+ LF+ + +S L LL + L
Sbjct: 1 MLSLLLIGIRLEKEFGFMRIGTLYVISGVGGSLLSALFMVSNISVGASGALFGLLGSMLS 60
Query: 189 TLVV-----------------IIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
L+ II INLAVGILPHVDNFAH+GGF +GF LGFVLL+RPQF
Sbjct: 61 ELITNWTIYENKFAALLTLVIIILINLAVGILPHVDNFAHLGGFTSGFFLGFVLLVRPQF 120
Query: 232 GWAERHQLP---AQARVKSRHNPYQYVLCIVALVLL 264
G+ + P KS++ YQ +L ++A +++
Sbjct: 121 GYINQKNSPLGLPMGTTKSKYKTYQIILWVIATLII 156
>gi|219110511|ref|XP_002177007.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411542|gb|EEC51470.1| predicted protein, partial [Phaeodactylum tricornutum CCAP 1055/1]
Length = 261
Score = 103 bits (257), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 75/255 (29%), Positives = 122/255 (47%), Gaps = 43/255 (16%)
Query: 82 SFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVF 141
F PL NPLFGPS+ L GA + +V + Q +R+ T I+LHAG++H NML+ F
Sbjct: 11 KFAPLDVNPLFGPSAQALLDAGARQTALIVDDGQWFRIFTPIFLHAGLVHYGINMLAFWF 70
Query: 142 IGIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVSL--------------------- 179
IG +E+ G + ++ + G GG +FL VS+
Sbjct: 71 IGGAIEETHGIINTIVLFFIPGIGGNILGAIFLPQYVSVGASGGIFGLIGGCLADIFLNW 130
Query: 180 -LVLL-------------AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVL 225
++ + A A+ LV+ I IN+ +G+ P++DNF H+GG + G L GF +
Sbjct: 131 NILFIKEYEDDTLTWRKNAVAIAWLVLDIVINVVLGLTPYIDNFTHLGGLVYGLLCGFSM 190
Query: 226 LLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHC 285
+ G+ H P K R +++ I+++ L++ + ++L + G + C
Sbjct: 191 IEPLAVGFFGVHTSPLG---KLRKIIVRFMGLILSVFLIV----ITTIVLATSDVGENPC 243
Query: 286 SWCHYLSCVPTSKWK 300
C Y+SCVP WK
Sbjct: 244 QGCRYISCVPFPWWK 258
>gi|357453409|ref|XP_003596981.1| Membrane protein [Medicago truncatula]
gi|355486029|gb|AES67232.1| Membrane protein [Medicago truncatula]
Length = 220
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 78/246 (31%), Positives = 118/246 (47%), Gaps = 39/246 (15%)
Query: 57 MYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGAL---EWDRVVHE 113
MY NCP C+A FLG LSF+P+ +NPL G S TL K+G + + DR+ H+
Sbjct: 1 MYEYNCPS---IAPHSCLASFLGILSFQPITQNPLLGSSPLTLVKMGTMYFKKSDRLHHK 57
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF-GGAYYLLF 172
G+ I ++H ++ M S +F + + V VG + G GG L
Sbjct: 58 KFGYVRIE-------ILHTMSGMGSSLFSALFIPTS---VSVGVSGAIMGLVGGTLSDLI 107
Query: 173 LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
+ S+ L+ A ++ +++ I+ A +NF IGG + LLG+VLL+
Sbjct: 108 MHPNKSIWTLIGAIIIRSGLVLIISQA-------NNFGIIGGLITEILLGYVLLI----- 155
Query: 233 WAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLS 292
+R SR P Q L + + VLL + G+V+ +G +DHCSW HYL
Sbjct: 156 ----------SRKHSRFAPCQQALRVNSSVLLTIRLMGGMVLFLKGVAMSDHCSWYHYLR 205
Query: 293 CVPTSK 298
CVP +
Sbjct: 206 CVPIKR 211
>gi|357448921|ref|XP_003594736.1| Rhomboid family member [Medicago truncatula]
gi|355483784|gb|AES64987.1| Rhomboid family member [Medicago truncatula]
Length = 190
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 86/147 (58%), Gaps = 10/147 (6%)
Query: 45 FVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGA 104
FVVAN +FI+ MY NNCP C+A L + SFE +K+NPL L K+GA
Sbjct: 54 FVVANSVIFILTMYENNCPS---IAPHSCLASLLDKFSFESIKQNPL-------LVKMGA 103
Query: 105 LEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF 164
+ + + +RL T +WLHAG + LL NM ++++ GI LE+++G V++ ++ +SG
Sbjct: 104 MYFTKSDRLQHIYRLFTSLWLHAGAVDLLINMFNILYYGISLERKYGSVQIAILHNISGI 163
Query: 165 GGAYYLLFLFNAVSLLVLLAAALLTLV 191
GG+ + ++ V + A+++LV
Sbjct: 164 GGSLFSALFIIPANVSVGASGAIMSLV 190
>gi|268637931|ref|XP_002649151.1| rhomboid family protein [Dictyostelium discoideum AX4]
gi|256012943|gb|EEU04099.1| rhomboid family protein [Dictyostelium discoideum AX4]
Length = 489
Score = 100 bits (248), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 85/297 (28%), Positives = 138/297 (46%), Gaps = 61/297 (20%)
Query: 30 EPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKEN 89
E D + +P F++A +++ + M+I WE + FEP K N
Sbjct: 224 EDHRDMEPPKQFVPYFIIA-ISLIDLVMFI-------WE--------IIYNGGFEPWKTN 267
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
P FGP+S TL +GA ++ ++ + WR T I+LH G+ H L NM++ + +G++LE+
Sbjct: 268 PWFGPNSYTLLDVGA-KYSPLILNGEWWRFFTPIFLHVGIFHYLMNMVTQLRVGMQLERA 326
Query: 150 FGFVRVGFVYLLSGFG---------------GAYYLLFLFNAVSLLVL------LAAALL 188
+G R+ +YLL G GA +F F V L L LA L
Sbjct: 327 YGGHRIVPIYLLCGVAGNLCSAIMLPNSVQVGASGAIFGFLGVLLTDLIRNWSVLAKPWL 386
Query: 189 ---TLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLL--LRPQFGWAERHQLPAQ 242
+L+ I + AVG+ LP VDNFAH+GGF+AG L + L L P+ +R
Sbjct: 387 NFGSLLFSIITSFAVGLFLPGVDNFAHLGGFIAGILTAAIFLPSLTPKRAIGKR------ 440
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
+L ++ + L + F V+ ++ + ++ C C Y++C+ W
Sbjct: 441 -----------LLLLMIVIPLTVALFVALFVVFYKNIDADEWCFGCKYITCLQVLSW 486
>gi|448114817|ref|XP_004202673.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
gi|359383541|emb|CCE79457.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
Length = 524
Score = 98.6 bits (244), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 111/246 (45%), Gaps = 49/246 (19%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
G E D HQ +R+IT I+LHAG IH++ N+L +G +E+ G ++ +Y+ S
Sbjct: 265 GIPEADSKYKPHQWYRIITPIFLHAGFIHIIFNLLLQTTMGATIERHIGLIKYFLIYIPS 324
Query: 163 GFGG----------------AYYLLFLFNAVSLLVLLAAA---------------LLTLV 191
G G A LF A L++ + L LV
Sbjct: 325 GIAGFLLGANFSPDGISSTGASGALFGILATDLILFIYCGRKNTNIYGTKKFGLFLTFLV 384
Query: 192 VIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE------RHQLPAQARV 245
I ++ +G+LP +DNF+HIGGF G L VL+ P F + + H Q +
Sbjct: 385 AEIIVSFVLGLLPGMDNFSHIGGFAMGILTSVVLIPDPFFVYVDGIIIYNAHDNTLQQFL 444
Query: 246 KS--------RHNPYQYVL-CIVALVLLIVG--FTVGLVM-LFRGENGNDHCSWCHYLSC 293
+ PY++ L C+V V L++ F LV + ++ N+HCSWC Y++C
Sbjct: 445 NNWNPFYNYEDKIPYRFYLWCLVRTVCLVLAILFIALLVKNFYSSDSPNEHCSWCKYINC 504
Query: 294 VPTSKW 299
+P W
Sbjct: 505 IPVHGW 510
>gi|448112251|ref|XP_004202049.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
gi|359465038|emb|CCE88743.1| Piso0_001522 [Millerozyma farinosa CBS 7064]
Length = 578
Score = 98.2 bits (243), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 111/246 (45%), Gaps = 49/246 (19%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
G E HQ +R++T I+LHAG IH++ N+L +G +E+ GF++ +Y+ S
Sbjct: 320 GVPEDGSKYKPHQWYRIVTPIFLHAGFIHIIFNLLLQTTMGATIERHIGFIKYFLIYMPS 379
Query: 163 GFGG----------------AYYLLFLFNAVSLLVLLAAA---------------LLTLV 191
G G A LF A L++ + L LV
Sbjct: 380 GIAGFLLGSNFSPDGIASTGASGALFGILAADLIMFIYCGRKNTNIYGTKKFGLFLTFLV 439
Query: 192 VIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE------RHQLPAQARV 245
I I+ +G+LP +DNF+HIGGF G L VL+ P F + + H AQ +
Sbjct: 440 AEIIISFVLGLLPGMDNFSHIGGFAMGILTSVVLIPDPFFIYVDGIITYNAHDNTAQQFL 499
Query: 246 KS--------RHNPYQYVL-CIVALVLLIVGFTVGLVM---LFRGENGNDHCSWCHYLSC 293
+ PY++ L C+V +V L++ ++ + ++ N HCSWC Y++C
Sbjct: 500 NNWNPFYHYEDKIPYRFYLWCVVRIVCLVLAILFIALLLKNFYSSDSPNQHCSWCKYINC 559
Query: 294 VPTSKW 299
+P W
Sbjct: 560 IPVHGW 565
>gi|50426743|ref|XP_461969.1| DEHA2G09724p [Debaryomyces hansenii CBS767]
gi|49657639|emb|CAG90439.1| DEHA2G09724p [Debaryomyces hansenii CBS767]
Length = 610
Score = 97.4 bits (241), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 72/247 (29%), Positives = 117/247 (47%), Gaps = 59/247 (23%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG- 166
D V HQ +R+IT ++LHAG +H+L N+L V +G +E+ GF++ +YL+ G G
Sbjct: 281 DDVYKPHQWYRVITPMFLHAGFLHILFNLLLQVTMGASIERSIGFIKYAIIYLMCGISGF 340
Query: 167 ---------------AYYLLFLFNAVSLLVLLAAA---------------LLTLVVIIAI 196
A LF A ++++ + + +++ I I
Sbjct: 341 LLGANFSPNGIASTGASGALFGVVATNIIMFVYCGKKNTNIYGTKKYGLFIFIMIMEIVI 400
Query: 197 NLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE-------RHQLPAQAR----- 244
+L +G+LP +DNF+HIGGF G L+ +LL P + + R Q R
Sbjct: 401 SLVLGLLPGMDNFSHIGGFAMGILMAILLLPDPFLVYVDGIITYHARDDTMQQFRNNWNP 460
Query: 245 -------VKSRHNPYQYVLC---IVALVLLIVGFTVGLVMLFR-GENG-NDHCSWCHYLS 292
+ SR Y+ C +V+LVL IV + + F GEN +++CSWC Y++
Sbjct: 461 IYNWEDKIPSRF----YIWCGIRVVSLVLAIVYIALLVKNFFNGGENPIDNNCSWCKYIN 516
Query: 293 CVPTSKW 299
C+P + W
Sbjct: 517 CLPVNGW 523
>gi|449551010|gb|EMD41974.1| hypothetical protein CERSUDRAFT_79578 [Ceriporiopsis subvermispora
B]
Length = 460
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 87/282 (30%), Positives = 129/282 (45%), Gaps = 82/282 (29%)
Query: 81 LSFEPLKENPLFGPSSSTLQKLGAL-------------------------EWDRVV---- 111
+SF+P+ NP+ GPSSS L +GA D+V
Sbjct: 181 VSFKPVV-NPMLGPSSSALINVGARFPPCMKVVEGVPLNTLLPCLNDTANPPDKVCSLED 239
Query: 112 -------HE---HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
H+ +Q +R IT I+LHAG+IH L NML+ + ++E++ G + +Y+
Sbjct: 240 VCGFGGFHDETPNQWFRFITPIFLHAGIIHYLLNMLAQLTATAQVEREMGSISFLILYMA 299
Query: 162 SG-FG---------------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAI 196
SG FG GA +F AV+ + L A L+ +++ + I
Sbjct: 300 SGIFGNVLGGNFSLVGSPSVGASGAIFGTVAVAWVDLFAHWRYIYQPGRKLVYMLIELVI 359
Query: 197 NLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVL 256
+AVG +P+VDNFAHIGG + G L+G +LL P + RH+ V+
Sbjct: 360 GIAVGFIPYVDNFAHIGGLVMGLLVG--MLLYPIISPSTRHR--------------TIVI 403
Query: 257 CI-VALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
C +A + + V V L+ F N CSWC YLSC+PTS
Sbjct: 404 CFRIAAIPIAVVLYVVLIRNFYTSNPYAACSWCRYLSCIPTS 445
>gi|281203068|gb|EFA77269.1| mitochondrial substrate carrier family protein [Polysphondylium
pallidum PN500]
Length = 800
Score = 97.1 bits (240), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/244 (30%), Positives = 118/244 (48%), Gaps = 45/244 (18%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
FEP K NP FGPS++ L GA ++ + + WR + I+LH G+ HLL N+++ V +
Sbjct: 571 FEPWKTNPWFGPSATVLLNAGA-KYTPAMLAGEWWRFFSPIFLHVGIFHLLMNLMTQVRV 629
Query: 143 GIRLEQQFGFVRVGFVYLLSG-FGGAYYLLFLFNAVS------------LLV-------- 181
G++LE+ +G R+ +YLL G G +FL +V +LV
Sbjct: 630 GMQLERAYGAHRIVPIYLLCGVMGNLCSAIFLPQSVQAGASGAIFGFLGVLVTDLFRNWS 689
Query: 182 LLAAALL---TLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLL--LRPQFGWAE 235
LLA+ + +L+ I I+ AVG+ LP VDNFAH GGF+ G + + L L P+ +
Sbjct: 690 LLASPFMNCCSLMFTIIISFAVGLFLPGVDNFAHFGGFVMGIMSSLIFLPSLTPKRAIGK 749
Query: 236 RHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
R L ++A+ + + F V+ +R + C C Y++C+
Sbjct: 750 R-----------------VCLILIAIPITVATFIALFVVFYRQIETSSWCPGCKYITCLQ 792
Query: 296 TSKW 299
W
Sbjct: 793 FLSW 796
>gi|345564498|gb|EGX47460.1| hypothetical protein AOL_s00083g396 [Arthrobotrys oligospora ATCC
24927]
Length = 482
Score = 95.9 bits (237), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/259 (30%), Positives = 122/259 (47%), Gaps = 56/259 (21%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
NPL ++ +LQ+L + Q WR I +++HAG+IH+ N+L + +G +E+
Sbjct: 213 NPL---AACSLQQLCGFQ--DFSTPDQWWRFILPMFMHAGLIHIAFNLLIQLRLGTDMER 267
Query: 149 QFGFVRVGFVYLLSG-FG---------------GAYYLLFLFNAVSLLVLL--------- 183
+ G +R VY+ SG FG GA LF A+ LL L
Sbjct: 268 EIGIIRFAIVYISSGIFGFVLGGNFAPQGLASTGASGALFGILALVLLDLFYTWKQRESP 327
Query: 184 AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRP-----QFGWAERHQ 238
L+ L++ AI+ +G+LP VDNFAHIGGF+ G LG + P + G E +
Sbjct: 328 VKDLIFLIIDFAISFVLGLLPGVDNFAHIGGFLMGLALGLAFMRSPPALQSKLGKGESYN 387
Query: 239 LPAQARVKSR---------------HNPYQYVLCIVA---LVLLIVGFTVGLVMLFRGEN 280
+ A ++++ NP+ +V ++ L L I+ FT+ L+ F N
Sbjct: 388 SMSSAAIQNQGLRRLLRDPVGFFRGRNPFWWVWWLLRAGMLALAIISFTL-LLRNFYIYN 446
Query: 281 GNDHCSWCHYLSCVPTSKW 299
G C WC Y +C+P S W
Sbjct: 447 G--ECKWCRYFTCLPVSNW 463
>gi|390343899|ref|XP_003725988.1| PREDICTED: inactive rhomboid protein 1-like isoform 1
[Strongylocentrotus purpuratus]
Length = 888
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 40/216 (18%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----- 166
+ Q +RL ++LHAG+ H + + + + I LE+ G+ R+ +Y+ SG GG
Sbjct: 673 YPDQIYRLWLSLFLHAGIFHCVLSFIMHMTILRDLEKLAGWFRIAIIYIFSGIGGNLTSA 732
Query: 167 -------------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVD 207
A ++ +F +L ALL L+ II + A+G+LP +D
Sbjct: 733 ILIPYRAEVGPAGAQFGLLACLVVEVFQNWQILRNPCKALLKLLAIIMVLFALGLLPWID 792
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
NFAH+GGF+ G L F+ L FG +R+ + R+ Q V+CI VLL+
Sbjct: 793 NFAHLGGFICGIFLSFIFLPYICFGEFDRN----RKRI-------QMVVCI---VLLVGF 838
Query: 268 FTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
FT+G V+ + CSWC YL+CVP ++ C +
Sbjct: 839 FTLGFVLFYI--RPITECSWCQYLNCVPITEDFCND 872
>gi|390343897|ref|XP_783490.3| PREDICTED: inactive rhomboid protein 1-like isoform 2
[Strongylocentrotus purpuratus]
Length = 887
Score = 95.5 bits (236), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 107/216 (49%), Gaps = 40/216 (18%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----- 166
+ Q +RL ++LHAG+ H + + + + I LE+ G+ R+ +Y+ SG GG
Sbjct: 672 YPDQIYRLWLSLFLHAGIFHCVLSFIMHMTILRDLEKLAGWFRIAIIYIFSGIGGNLTSA 731
Query: 167 -------------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVD 207
A ++ +F +L ALL L+ II + A+G+LP +D
Sbjct: 732 ILIPYRAEVGPAGAQFGLLACLVVEVFQNWQILRNPCKALLKLLAIIMVLFALGLLPWID 791
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
NFAH+GGF+ G L F+ L FG +R+ + R+ Q V+CI VLL+
Sbjct: 792 NFAHLGGFICGIFLSFIFLPYICFGEFDRN----RKRI-------QMVVCI---VLLVGF 837
Query: 268 FTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
FT+G V+ + CSWC YL+CVP ++ C +
Sbjct: 838 FTLGFVLFYI--RPITECSWCQYLNCVPITEDFCND 871
>gi|320163557|gb|EFW40456.1| predicted protein [Capsaspora owczarzaki ATCC 30864]
Length = 1087
Score = 93.6 bits (231), Expect = 1e-16, Method: Composition-based stats.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 55/213 (25%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGI-------RLEQQFGFVRVGFVYLLSGFGG- 166
Q +R I+ I+LH G+IH +F+ I ++E+ G++R ++ +SG GG
Sbjct: 886 QWYRFISPIFLHVGIIHF-------IFVAIFENSVVGQVERSAGWLRTALIFFISGIGGD 938
Query: 167 ---AYYL-----------LFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGIL 203
A ++ LF F V + L + L+ L++++ I L +G+L
Sbjct: 939 IISAIFVPNQPTVGGTGALFGFLGVLFVELFQSWQLCRRPVVELIKLILLVVIALVIGLL 998
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQFG-WAERHQLPAQARVKSRHNPYQYVLCIVALV 262
P VDN+AHIGGF G + G + L FG W +R + +L +V +
Sbjct: 999 PWVDNWAHIGGFFFGVVAGIIFLPYIVFGKWDQRR---------------KRILLVVCIP 1043
Query: 263 LLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
LLI+ F LV +F N + CSWC Y CVP
Sbjct: 1044 LLIMMFIASLV-VFYALNVPNFCSWCRYADCVP 1075
>gi|393218506|gb|EJD03994.1| rhomboid-domain-containing protein [Fomitiporia mediterranea
MF3/22]
Length = 528
Score = 93.2 bits (230), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 67/209 (32%), Positives = 105/209 (50%), Gaps = 40/209 (19%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------- 165
+Q +R IT I+LHAG IH++ NML+ +++ +LE++ G VY +G FG
Sbjct: 306 NQWFRFITPIFLHAGFIHIILNMLAQLYVSAQLEREMGTGGFFLVYFAAGIFGNILGGNF 365
Query: 166 --------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHVDN 208
GA +F AVS + L A L+ +++ + + + +G +P+VDN
Sbjct: 366 SLVGVPSVGASGAIFGTVAVSWVDLFAHWKYHYRPSTRLIYMIIELILGIGMGFIPYVDN 425
Query: 209 FAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGF 268
FAH+GGF+ G L+G + P + + RHN + I A+ L+IV F
Sbjct: 426 FAHLGGFLMGLLVGMIF-------------YPVISETR-RHNMITWGFRIAAVPLVIVLF 471
Query: 269 TVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
V L F + + C WC YLSC+PT+
Sbjct: 472 VV-LTRNFYTTDPSASCGWCRYLSCIPTN 499
>gi|258566790|ref|XP_002584139.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237905585|gb|EEP79986.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 489
Score = 92.0 bits (227), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 114/241 (47%), Gaps = 55/241 (22%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I I+LHAG+IH+ N+L+ + IG +E+ G+ R VY SG
Sbjct: 224 DDKPEPNQWFRFIIPIFLHAGLIHIGVNLLAQMIIGADMERNIGWWRFAIVYYASGIFGF 283
Query: 164 -FGGAY-----------------------YLLFLFNAVSLLVLLAAALLTLVVIIAINLA 199
FGG + LL+ +N +S V LLT+++ + I+
Sbjct: 284 VFGGNFAAPGIASTGASGSLFGILALCVLELLYKWNTISRPVTY---LLTMILAVVISFV 340
Query: 200 VGILPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERH----QLPAQARVKSRHN 250
+G+LP +DNF+HIGGF+ G +LG LL LR + G + + P++ +
Sbjct: 341 LGLLPGLDNFSHIGGFLMGLVLGVCLLRSPDTLRERIGVSTPYLSVNGAPSRDAKQFIRQ 400
Query: 251 PYQY------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
P + +L + ALV ++V F + + ++ + CSWC YLSC+P
Sbjct: 401 PIGFFKGRKPLWWGWWLLRVGALVGILVAFILLINNFYKYRS---ECSWCKYLSCLPIKN 457
Query: 299 W 299
W
Sbjct: 458 W 458
>gi|303314767|ref|XP_003067392.1| Rhomboid family protein [Coccidioides posadasii C735 delta SOWgp]
gi|240107060|gb|EER25247.1| Rhomboid family protein [Coccidioides posadasii C735 delta SOWgp]
gi|320037727|gb|EFW19664.1| rhomboid family membrane protein [Coccidioides posadasii str.
Silveira]
Length = 485
Score = 91.7 bits (226), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 112/238 (47%), Gaps = 49/238 (20%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I I+LHAG+IH+ N+L+ + IG +E+ G+ R +Y SG
Sbjct: 228 DDKDEPNQWFRFIIPIFLHAGLIHIGVNLLAQLVIGADMERSIGWWRFAIIYYASGIFGF 287
Query: 164 -FGGAYYL-----------LFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGI 202
FGG + LF A+ +L LL LL +++ +AI+ +G+
Sbjct: 288 VFGGNFAAPGIASTGASGSLFGILALCVLDLLYKWNSIRRPMTYLLMMILAVAISFVLGL 347
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQ----LPAQARVKSRHNPYQ 253
LP +DNF+HIGGF+ G LG L+ LR + G + PA++ K P
Sbjct: 348 LPGLDNFSHIGGFLMGLALGICLMRSPDTLRERIGSTTPYMSVDGSPAESAKKFIKEPVG 407
Query: 254 Y------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
+ +L ALV +++ F + L ++ + CSWC YLSC+P W
Sbjct: 408 FFKGRKPLWWAWWLLRAGALVGILIAFILLLNNFYKYRS---ECSWCKYLSCLPIKNW 462
>gi|392573734|gb|EIW66872.1| hypothetical protein TREMEDRAFT_34153 [Tremella mesenterica DSM
1558]
Length = 528
Score = 91.3 bits (225), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/215 (32%), Positives = 102/215 (47%), Gaps = 45/215 (20%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG----- 165
Q WR + I+LH G+IHLL NM + V IG ++E++ G + VY+ G +G
Sbjct: 305 EPDQSWRFVLPIFLHVGIIHLLLNMAAQVTIGAQIEREMGTIPFLMVYMAGGIYGFVLGG 364
Query: 166 ----------GAYYLLFLFNAVSLLVL-----------LAAALLTLVVIIAINLAVGILP 204
GA LF NA + L L A L L++ + +A+G +P
Sbjct: 365 NFSRTGIPSVGASGALFAINACVTVDLGLHWKYEPRPKLKAFL--LLIEFCVGIAIGYIP 422
Query: 205 H-VDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVL 263
+ VD AH+GGF G L+G +L P+ + KS N + L ++AL L
Sbjct: 423 NAVDGLAHLGGFAMGLLMGIIL-------------YPSISETKSHRN-VVWTLRLLALPL 468
Query: 264 LIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
+IV F + + F + N C WC +LSC+PTS
Sbjct: 469 IIVAFVL-TIRNFYTADPNAACEWCRFLSCIPTSS 502
>gi|50547561|ref|XP_501250.1| YALI0B23078p [Yarrowia lipolytica]
gi|49647116|emb|CAG83503.1| YALI0B23078p [Yarrowia lipolytica CLIB122]
Length = 611
Score = 90.9 bits (224), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 78/255 (30%), Positives = 105/255 (41%), Gaps = 75/255 (29%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLF 174
Q WR IT I++HAG+IH+ NML + +G +E+Q G +R F+Y G GG LF
Sbjct: 351 QWWRFITPIFMHAGIIHIGFNMLLQMTLGADIEKQIGIIRYFFIYFACGIGG---FLFGG 407
Query: 175 NAVSLLVLLAAALLTLVVIIAINL----------------------------AVGILPHV 206
N + A +L IIAI+L +G+LP +
Sbjct: 408 NYTPDGIASTGASGSLFGIIAIDLLDLLFNWSIFRNPVRILIIHIIEIVVSFVLGLLPGL 467
Query: 207 DNFAHIGGFMAGFLLGFVLLLRP------------------QFGWAERHQLPAQARVKSR 248
DNF+HIGGF+ G LLG +L P + R QL Q
Sbjct: 468 DNFSHIGGFIVGVLLGIAILRSPLKVVDEGTSLFNQGMSSEEQARLRRRQLIQQEEDDKN 527
Query: 249 H---------------------NPYQ-YVLCIVALV-LLIVGFTVGLVMLFRG-ENGNDH 284
H P + Y+ +V L L +VG GL L R +NG
Sbjct: 528 HLLAVFPKSRDQLDRDIEQFKSRPRRWYIWFLVRLACLALVGVFFGL--LSRDFQNGGGD 585
Query: 285 CSWCHYLSCVPTSKW 299
C WC YLSC+P + W
Sbjct: 586 CHWCKYLSCLPVNGW 600
>gi|397602203|gb|EJK58107.1| hypothetical protein THAOC_21791 [Thalassiosira oceanica]
Length = 618
Score = 90.9 bits (224), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/262 (28%), Positives = 117/262 (44%), Gaps = 58/262 (22%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVV-ANVAVFIVAMYINNCP 63
D+E ++ + N+ Y S + + D W F++ A AV +V+ ++N
Sbjct: 262 DVEWAEDAAFRRANKEPYLSWKDF-QTTRDNGWNRPFFTYFLLSACTAVLVVSFWLNG-- 318
Query: 64 KNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCI 123
WE EPL NP+ GPS+ TL K+GA + +V++ + +RL + +
Sbjct: 319 ---WE--------------VEPLSVNPMIGPSAETLLKMGAKQTSLIVNQGEWYRLFSPM 361
Query: 124 WLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA-YYLLFLFNAVS---- 178
LHAG+IH L NM++L FIG +EQ GF ++++ GG LFL +S
Sbjct: 362 VLHAGLIHYLLNMMALWFIGKAVEQCHGFAAAAILFIIPAVGGTILSALFLPEYISVGAS 421
Query: 179 --LLVLLAA------------------------------ALLTLVVIIAINLAVGILPHV 206
+ L+ A L+ L+ I IN VG+ P V
Sbjct: 422 GGIFGLIGACVADILINWRLLFSKHVNSTKDGTRFRHIKVLMYLLFDIVINCLVGLTPFV 481
Query: 207 DNFAHIGGFMAGFLLGFVLLLR 228
DNF H+GG + GF+ G + R
Sbjct: 482 DNFTHLGGMVYGFMCGLSTIER 503
>gi|119175195|ref|XP_001239866.1| hypothetical protein CIMG_09487 [Coccidioides immitis RS]
gi|392870060|gb|EAS28616.2| DHHC zinc finger membrane protein [Coccidioides immitis RS]
Length = 485
Score = 90.5 bits (223), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 111/234 (47%), Gaps = 49/234 (20%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-----FGG 166
+Q +R I I+LHAG+IH+ N+L+ + IG +E+ G+ R +Y SG FGG
Sbjct: 232 EPNQWFRFIIPIFLHAGLIHIGVNLLAQLVIGADMERSIGWWRFAIIYYASGIFGFVFGG 291
Query: 167 AYYL-----------LFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGILPHV 206
+ LF A+ +L LL LL +++ +AI+ +G+LP +
Sbjct: 292 NFAAPGIASTGASGSLFGILALCVLDLLYKWNSIRRPMTYLLMMILAVAISFVLGLLPGL 351
Query: 207 DNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQ----LPAQARVKSRHNPYQY--- 254
DNF+HIGGF+ G LG L+ LR + G + PA++ K P +
Sbjct: 352 DNFSHIGGFLMGLALGICLMRSPDTLRERIGATTPYMSVDGSPAESAKKFIKEPVGFFKG 411
Query: 255 ---------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
+L ALV +++ F + L ++ + CSWC YLSC+P W
Sbjct: 412 RKPLWWAWWLLRAGALVGILIAFILLLNNFYKYRS---ECSWCKYLSCLPIKNW 462
>gi|254572129|ref|XP_002493174.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032972|emb|CAY70995.1| Hypothetical protein PAS_chr3_0934 [Komagataella pastoris GS115]
gi|328352810|emb|CCA39208.1| Rhomboid family member 1 [Komagataella pastoris CBS 7435]
Length = 562
Score = 90.1 bits (222), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 56/241 (23%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q WR+IT ++LHAG IH++ N+L + + +E+ G +R G +YL SG G
Sbjct: 265 QWWRMITPMFLHAGFIHIIFNLLLQMTLAYNIERVIGPIRYGTIYLASGVAGFVLGSNFS 324
Query: 167 --------AYYLLFLFNAVSLLVLLAAA---------------------LLTLVVIIAIN 197
A L AV++L+L+ L+ +V + I
Sbjct: 325 PVGVSSTGASGALLGVMAVNILLLITTKSTAHFGGVKGKQVPVRNFKVILIVSIVELVII 384
Query: 198 LAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE-------RHQLPAQARVK---- 246
+G+LP +DNFAHIGGF G LLG L+ P F + + + + ++K
Sbjct: 385 FFLGLLPGLDNFAHIGGFAMGLLLGLTLIDDPFFVYDKGYYNKIYTERTSQKEKLKNWSS 444
Query: 247 ----SRHNPYQYVLCIVALVLLIVGFTVGLVMLF----RGENGNDHCSWCHYLSCVPTSK 298
SRH+ ++ +V + L+ ++ +G +D C WC Y++C+P +
Sbjct: 445 HLKTSRHSTKFFIWLLVRVAALVTAILYFYFLIHNFQKKGSESSDSCRWCKYINCLPVNG 504
Query: 299 W 299
W
Sbjct: 505 W 505
>gi|219110513|ref|XP_002177008.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411543|gb|EEC51471.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 570
Score = 89.4 bits (220), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 78/254 (30%), Positives = 114/254 (44%), Gaps = 46/254 (18%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
F PL NPL GPSS L LGA + ++ E Q +R++T I+LHAG++H L NML+ FI
Sbjct: 251 FAPLNINPLIGPSSEQLIDLGARQTSLILEEGQWFRIVTPIFLHAGIVHYLTNMLAFWFI 310
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVSL----------------LVL--- 182
G +E+ G ++ + G GG FL +S+ +VL
Sbjct: 311 GGAIEEAHGIATAIVLFFIPGVGGNILGATFLPQYISVGASGGTFGMIGGYFADIVLNWN 370
Query: 183 ----------------LAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLG-FVL 225
AA+ L + I L +G+ P +DNF H+G G L G F +
Sbjct: 371 ILCSRDHDEDVLNWRKNIAAIARLAIGIIALLVLGVTPFIDNFTHLGALCYGLLCGLFAI 430
Query: 226 LLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHC 285
P G R LP++ K ++ + IV++ LL+ + V+L + C
Sbjct: 431 EPVPLEGSIVR--LPSR---KMSDLLFRQIGAIVSVFLLV----ITSVVLNSMNVDDSPC 481
Query: 286 SWCHYLSCVPTSKW 299
C YLSCVP W
Sbjct: 482 HGCQYLSCVPFPWW 495
>gi|255586757|ref|XP_002533998.1| conserved hypothetical protein [Ricinus communis]
gi|223526009|gb|EEF28387.1| conserved hypothetical protein [Ricinus communis]
Length = 114
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 48/65 (73%), Gaps = 4/65 (6%)
Query: 34 DQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFG 93
++W W+IP FV+AN+ +F++ MY+NNCPKN CVA FLGR SF+P KENPL G
Sbjct: 54 SKKWKPWIIPSFVIANIVMFVITMYVNNCPKN----SVSCVASFLGRFSFQPFKENPLLG 109
Query: 94 PSSST 98
PSS+T
Sbjct: 110 PSSNT 114
>gi|321259830|ref|XP_003194635.1| hypothetical protein CGB_F1590W [Cryptococcus gattii WM276]
gi|317461107|gb|ADV22848.1| hypothetical protein CNBF1190 [Cryptococcus gattii WM276]
Length = 530
Score = 88.2 bits (217), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 72/213 (33%), Positives = 99/213 (46%), Gaps = 49/213 (23%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG-------- 165
Q WR I I+LH G+IHL+ NML + ++E++ G + VY+L G +G
Sbjct: 312 QWWRFILPIFLHVGIIHLIINMLVQITASAQVEREMGTIPFLIVYMLGGIYGFVLGGNFT 371
Query: 166 -------GAYYLLFLFNAVSLLVL-----------LAAALLTLVVIIAINLAVGILPH-V 206
GA LF NA L+ L L A L LV+ + I A+G +P+ V
Sbjct: 372 RTGIPSVGASGALFATNACVLVDLVLHWKYEERPKLKACL--LVLELGIGFAMGYIPNAV 429
Query: 207 DNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVL--CIVALVLL 264
D AH+GG+ G L G +L PA K R +YV+ C V V L
Sbjct: 430 DGLAHLGGWAMGILCGIIL-------------YPAITETKRR----KYVVWGCRVVAVAL 472
Query: 265 IVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
I+ V + F ++ N C WC YLSC+PTS
Sbjct: 473 IIMAMVMTIKNFYTDDPNKACEWCKYLSCIPTS 505
>gi|115387927|ref|XP_001211469.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114195553|gb|EAU37253.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 517
Score = 87.8 bits (216), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 74/264 (28%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q WR I ++LH+G+IH+ N+L + +G +E+ G+ R G VY SG
Sbjct: 237 DAKPAPNQWWRFIIPMFLHSGIIHIGFNLLVQMTMGADMERMVGWWRYGLVYFASGIWGF 296
Query: 164 -FGGAYYLLF---------LFNAVSLLVL--------LAAALLTLVVI---IAINLAVGI 202
GG Y F LF ++L +L A+ ++ LV++ + I+ +G+
Sbjct: 297 VLGGNYAAPFEASCGCSGALFGILALYILDLLYTWKDRASPVVELVIMVLGVGISFVLGL 356
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWA---------------ERHQLPA- 241
LP +DNF+HIGGF+ G LG L+ LR + G A E PA
Sbjct: 357 LPGLDNFSHIGGFVMGLALGLTLMRSPNALRERIGLARAPYVAMSGGVASTSEGETKPAG 416
Query: 242 ------------QARVKSRHNPYQ--------------YVLCIVALVLLIVGFTVGLVML 275
+A + NP +++ + ALV ++GF + LV
Sbjct: 417 SKSSFMDFFKARKAGTATADNPGPVGFFKGRKPLWWAWWLVRLGALVAALIGFILLLVDF 476
Query: 276 FRGENGNDHCSWCHYLSCVPTSKW 299
++ N CSWC+ LSC+P W
Sbjct: 477 YKYHESN--CSWCYRLSCLPVKDW 498
>gi|344232848|gb|EGV64721.1| rhomboid-domain-containing protein [Candida tenuis ATCC 10573]
Length = 535
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 71/246 (28%), Positives = 112/246 (45%), Gaps = 57/246 (23%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
D HQ +R+IT I++HAG +H+L N+L V +G +E+ G V+ +YLLSG G
Sbjct: 191 DDAYDPHQWYRIITPIFIHAGFLHILFNLLLQVTMGFSIERAIGSVKYAIIYLLSGVSG- 249
Query: 168 YYLL---FLFNAV-------SLLVLLAAALLTLVVI-----------------------I 194
+LL F N V SL ++A ++ + I
Sbjct: 250 -FLLGANFTPNGVASSGASGSLFGIVATNIVMFIYCGKKNTNMYGTKKFGLFLCIMFGEI 308
Query: 195 AINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE-----RHQLPAQARVKSRH 249
++ +G+LP +DNF+HIGGF G L +LL P F + + + L +
Sbjct: 309 VVSFVLGLLPGLDNFSHIGGFAIGVLSSILLLKDPFFVYEDGIITYQSHLSIWQEFANNW 368
Query: 250 NPYQ----------YVLC---IVALVLLIVGFTVGLVMLFRGEN---GNDHCSWCHYLSC 293
NPY Y+ C ++ L+ V F + L+ F G++ + C WC Y+SC
Sbjct: 369 NPYYNFEDKIVSRFYIWCGVRVLCFALIFVYFAL-LINNFFGKSILPEENSCHWCKYISC 427
Query: 294 VPTSKW 299
+P + W
Sbjct: 428 LPVNGW 433
>gi|156378550|ref|XP_001631205.1| predicted protein [Nematostella vectensis]
gi|156218241|gb|EDO39142.1| predicted protein [Nematostella vectensis]
Length = 587
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 67/229 (29%), Positives = 106/229 (46%), Gaps = 47/229 (20%)
Query: 108 DRVVHEHQGWRLITCIWLH--------AGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVY 159
D QG+RL++ ++LH G+IHLL N++ V IG +E + G +R +Y
Sbjct: 271 DDTSGPGQGYRLMSAVFLHLGNYGNCLHGIIHLLLNLIFQVIIGRMIEIEIGTIRTACIY 330
Query: 160 LLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAIN---------------------- 197
L+SG GG+ + +F ++ V + AL L+ ++ +
Sbjct: 331 LVSGLGGSL-VSGVFTPLTPQVGSSGALFGLIALMLAHYCYYYPSLRRPYWNLPILLSII 389
Query: 198 ---LAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQY 254
A+G LP+V NF HIGGF+ G L VL R GWA R R+ +
Sbjct: 390 ILCFALGTLPYVGNFVHIGGFVFGLLTTVVLTRRGTVGWAR--------RTSCRY----W 437
Query: 255 VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ +++L LLI V ++L+ EN + C CH + C+P + C N
Sbjct: 438 SIKLISLALLITLTIVCFLLLYTVEN-TEFCKNCHLIDCIPWTSNFCPN 485
>gi|302911024|ref|XP_003050402.1| hypothetical protein NECHADRAFT_63508 [Nectria haematococca mpVI
77-13-4]
gi|256731339|gb|EEU44689.1| hypothetical protein NECHADRAFT_63508 [Nectria haematococca mpVI
77-13-4]
Length = 569
Score = 87.4 bits (215), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/240 (30%), Positives = 115/240 (47%), Gaps = 49/240 (20%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-F 164
+ D+ +Q +R IT I+LHAGV+H+L N+L + IG +E+ G VR VY+ +G F
Sbjct: 323 DIDQSPQPNQWFRFITSIFLHAGVVHILFNLLVQLTIGKDMERAIGPVRFLLVYISAGIF 382
Query: 165 G---------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAV 200
G GA +F A++LL LL LL + + +AI +
Sbjct: 383 GNIMGGNYAPPGYASMGASGAIFGIIALTLLDLLYSWKDRKSPVKDLLFIFLDMAIAFVL 442
Query: 201 GILPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQL--PAQARVKSR--HNP 251
G+LP +DNFAHIGGF+ G LG +L LR + G + P+ + NP
Sbjct: 443 GLLPGLDNFAHIGGFLMGLSLGVCVLHSPNSLRRRIGQDLSYSAVSPSTGETPAPFFKNP 502
Query: 252 YQY------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
+ ++ LV++IV F +V+L R ++ C WC +++C+P W
Sbjct: 503 VGFFKGRKPLWWAWWLIRAGFLVMIIVVF---IVLLNRFYTSHEVCKWCKHINCLPVKDW 559
>gi|260824301|ref|XP_002607106.1| hypothetical protein BRAFLDRAFT_68100 [Branchiostoma floridae]
gi|229292452|gb|EEN63116.1| hypothetical protein BRAFLDRAFT_68100 [Branchiostoma floridae]
Length = 1084
Score = 87.4 bits (215), Expect = 8e-15, Method: Composition-based stats.
Identities = 67/211 (31%), Positives = 103/211 (48%), Gaps = 40/211 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL T ++LHAG++HLL +++ + I LE+ G+ R+ +Y+LSG GG A +L
Sbjct: 876 QFYRLWTSLFLHAGLVHLLLSVIFQMTILRDLEKLAGWGRIAIIYILSGIGGNLASAVFL 935
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ +F + +L A+L L +I+ + +G+LP +DNFA
Sbjct: 936 PYQAEVGPAGAHFGVIACLFVEVFQSWQMLQAPWRAILKLSIIVLVLFLLGLLPWIDNFA 995
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF+ G LL F L FG ++++ Q I+ LL V F
Sbjct: 996 HITGFICGILLSFSFLPYITFGAFDKNRKRIQ---------------IIVSFLLFVAFFS 1040
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF D C C Y++C+P K C
Sbjct: 1041 GLVVLFYVRPLTD-CQGCEYVNCIPFDKTFC 1070
>gi|260943073|ref|XP_002615835.1| hypothetical protein CLUG_04717 [Clavispora lusitaniae ATCC 42720]
gi|238851125|gb|EEQ40589.1| hypothetical protein CLUG_04717 [Clavispora lusitaniae ATCC 42720]
Length = 596
Score = 87.0 bits (214), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 114/249 (45%), Gaps = 53/249 (21%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
G E D Q +R++T I+LHAG +H+ NML + +G +E+Q G+++ G +Y+ S
Sbjct: 259 GVREVDGEFIPDQWYRVVTPIFLHAGFLHIAFNMLLQLTMGAAVERQIGWLKFGVIYMAS 318
Query: 163 GFG----------------GAYYLLFLFNAVSLLVLLAAA---------------LLTLV 191
G GA LF A ++L+ + + + +V
Sbjct: 319 GIAGFLLGANFSPDGIASTGASGALFGIIATNMLLFIFSGRKNTNMYGTKRYGLFMAVMV 378
Query: 192 VIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER-HQLPAQARV----K 246
+ ++ A+G+LP +DNF+HIGGF G LL VLL P + + + R
Sbjct: 379 FEVLVSFALGLLPGLDNFSHIGGFCMGLLLSVVLLQDPSHVYVDGVYTYEPDTRTWQLFL 438
Query: 247 SRHNPYQYVLCIVA------LVLLIVGFTVGLV---MLFRG-------ENGNDHCSWCHY 290
+ NP VA +VL ++ T+ ++ +LFR + GN CSWC Y
Sbjct: 439 NNWNPMNKWHDKVAWKATVWMVLRVICLTLAILFFALLFRNLYSKGMRDEGN-KCSWCKY 497
Query: 291 LSCVPTSKW 299
++C+P W
Sbjct: 498 INCIPVHDW 506
>gi|134112822|ref|XP_774954.1| hypothetical protein CNBF1190 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257602|gb|EAL20307.1| hypothetical protein CNBF1190 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 532
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 100/215 (46%), Gaps = 49/215 (22%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------- 165
Q WR I I+LH G+IHL+ NML + + ++E++ G + VY+L G +G
Sbjct: 313 DQWWRFILPIFLHVGIIHLIVNMLVQIIVSAQVEREMGTIPFLIVYMLGGIYGFVLGGNF 372
Query: 166 --------GAYYLLFLFNAVSLLVL-----------LAAALLTLVVIIAINLAVGILPH- 205
GA LF NA L+ L L A LL L +I A+G +P+
Sbjct: 373 TRTGIPSVGASGALFATNACVLVDLVLHWKYEERPKLKAFLLFLEFVIG--FAMGYIPNA 430
Query: 206 VDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVL--CIVALVL 263
VD AH+GG+ G L G +L PA K R +YV+ C V +
Sbjct: 431 VDGLAHLGGWAMGILCGTIL-------------YPAITETKRR----KYVIWGCRVVALA 473
Query: 264 LIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
LI+ V + F ++ N+ C WC YL+C+PTS
Sbjct: 474 LIIMAMVMTIKNFYTDDPNEACEWCKYLACIPTSS 508
>gi|346974557|gb|EGY18009.1| rhomboid family membrane protein [Verticillium dahliae VdLs.17]
Length = 567
Score = 87.0 bits (214), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 152/349 (43%), Gaps = 84/349 (24%)
Query: 32 GSDQQWTSWLIPMFVVANVAVFIVAMYINNCP---KNNWEGGRGCV--------ARFLGR 80
G+D++ +W++ + +A V VFI + N P K ++ G AR++
Sbjct: 196 GADKKRIAWVVYILTIAQVGVFIGQIVRNGSPIMIKPSFNPMIGPSFYVNINMGARYVPC 255
Query: 81 L-SFEPLKE--NPLFGPSSSTLQKLGALEWDRVV--------------------HEHQGW 117
+ + E +KE P++ P +T E +R +Q +
Sbjct: 256 MHTVEAIKEAQQPIWWPCPNTTSNDQNDESNRCSLGELCGFGGVPNPQDPNEKGEPNQWF 315
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG----------- 165
R IT I+LHAG+IH+ NML + IG +E G VR VY +G FG
Sbjct: 316 RFITPIFLHAGLIHIGVNMLLQMTIGKEMEMAIGPVRFFLVYFSAGIFGNVMGANYAGTG 375
Query: 166 ----GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGILPHVDNFAHI 212
GA LF A++ L L + L+ +++ + I +G+LP +DNFAHI
Sbjct: 376 EASTGASGALFGIIALTALDLAYSWKDRRHPVKDLMFVLLDVVICFVLGLLPGLDNFAHI 435
Query: 213 GGFMAGFLLGFVLL-----LRPQFGWAERHQL----PAQA-RVKSRHNPYQY-------- 254
GGF+ G LG +L LR + G+ + AQA V NP +
Sbjct: 436 GGFLMGLCLGICVLHSPNSLRRRLGYDTSYATVNGEGAQAGPVPFVKNPTGFFKGRKPLW 495
Query: 255 ----VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
++ AL+L+IV F V L + + CSWC YLSC+P + W
Sbjct: 496 WAWWLVRAAALILVIVVFIVLLNNFYVSHS---TCSWCKYLSCLPVNGW 541
>gi|402074200|gb|EJT69729.1| rhomboid family membrane protein [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 587
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 80/249 (32%), Positives = 110/249 (44%), Gaps = 69/249 (27%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG--- 165
V +Q +R IT I++HAG+IH+ N+L + IG +E G +R VY+ +G FG
Sbjct: 317 VPAPNQWFRFITPIFMHAGLIHIGFNLLLQLTIGRDMEMSIGTLRFFLVYMSAGIFGFVM 376
Query: 166 ------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGILP 204
GA LF A++LL LL LL + + +AI+ +G+LP
Sbjct: 377 GGNFAATGIASTGASGSLFGIIALTLLDLLYSWKDRKNPTKDLLFIFLDVAISFVLGLLP 436
Query: 205 HVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQLPAQ---ARVKSRH------- 249
+DNF+HIGGF+ G LG LL LR + G + P Q ARV
Sbjct: 437 GLDNFSHIGGFLMGLALGVCLLHSPNSLRRRIGTDDPPYTPVQDGRARVTGSQTAPPFYK 496
Query: 250 NPYQY-------------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHY 290
NP + +L VA VLL+ F V V HC WC Y
Sbjct: 497 NPVGFFKGRKPLWWLWWLIRAGALLLVFVAFVLLLNNFYVTRV----------HCEWCKY 546
Query: 291 LSCVPTSKW 299
LSC+ + W
Sbjct: 547 LSCLNINGW 555
>gi|302421084|ref|XP_003008372.1| rhomboid family membrane protein [Verticillium albo-atrum VaMs.102]
gi|261351518|gb|EEY13946.1| rhomboid family membrane protein [Verticillium albo-atrum VaMs.102]
Length = 524
Score = 86.7 bits (213), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 99/349 (28%), Positives = 151/349 (43%), Gaps = 84/349 (24%)
Query: 32 GSDQQWTSWLIPMFVVANVAVFIVAMYINNCP---KNNWEGGRGCV--------ARFLGR 80
G+D++ +W++ + +A V VFI + N P K ++ G AR++
Sbjct: 153 GADKKRIAWVVYILTIAQVGVFIGQIVRNGSPIMIKPSFNPMIGPSFYVNINMGARYVPC 212
Query: 81 L-SFEPLKE--NPLFGPSSSTLQKLGALEWDRVV--------------------HEHQGW 117
+ + E +KE P++ P +T E +R +Q +
Sbjct: 213 MHTVEAIKEAQQPIWWPCPNTTSNDQNDESNRCSLGELCGFGGVPNPQDPNEKGEPNQWF 272
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG----------- 165
R IT I+LHAG+IH+ NML + IG +E G VR VY +G FG
Sbjct: 273 RFITPIFLHAGLIHIGVNMLLQMTIGKEMEMAIGPVRFFLVYFSAGIFGNVMGANYAGTG 332
Query: 166 ----GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGILPHVDNFAHI 212
GA LF A++ L L L+ +++ + I +G+LP +DNFAHI
Sbjct: 333 EASTGASGALFGIIALTALDLAYSWKDRRHPVKDLMFVLLDVVICFVLGLLPGLDNFAHI 392
Query: 213 GGFMAGFLLGFVLL-----LRPQFGWAERHQL----PAQA-RVKSRHNPYQY-------- 254
GGF+ G LG +L LR + G+ + AQA V NP +
Sbjct: 393 GGFLMGLCLGICVLHSPNSLRRRLGYDTSYATVNGEGAQAGPVPFVKNPTGFFKGRKPLW 452
Query: 255 ----VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
++ AL+L+IV F V L + + CSWC YLSC+P + W
Sbjct: 453 WAWWLVRAAALILVIVVFIVLLNNFYVSHS---TCSWCKYLSCLPVNGW 498
>gi|310792586|gb|EFQ28113.1| rhomboid family protein [Glomerella graminicola M1.001]
Length = 561
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/238 (30%), Positives = 111/238 (46%), Gaps = 44/238 (18%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-F 164
+ ++ +Q +R IT I+LHAG+IH+ N+L + IG +E G +R VYL +G F
Sbjct: 313 DINQSPEPNQWFRFITPIFLHAGLIHIGFNLLLQMTIGKEMEVAIGSIRFFLVYLSAGIF 372
Query: 165 G---------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAV 200
G GA LF A++LL LL + L+ +++ + I+ +
Sbjct: 373 GNVMGANYAGVMAASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFIMLDVVISFVL 432
Query: 201 GILPHVDNFAHIGGFMAGFLLGFVLLLRP----------QFGWAERHQLPAQARVKSRHN 250
G+LP +DNFAHIGGF+ G LG +L P +A P Q N
Sbjct: 433 GLLPGLDNFAHIGGFLMGLALGVCVLHSPNSLRRRMGAEDPSYASMQLNPNQGPPPFLKN 492
Query: 251 PYQYVLCIVAL----VLLIVGFTVGLVMLFRGENGN-----DHCSWCHYLSCVPTSKW 299
P + L L+ GF + ++++F N + CSWC YLSC+P + W
Sbjct: 493 PVGFFKGRKPLWWAWWLVRAGFLLTVIIVFIVLLNNFYIYHNTCSWCKYLSCIPVNNW 550
>gi|380488088|emb|CCF37613.1| rhomboid family protein [Colletotrichum higginsianum]
Length = 572
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 76/238 (31%), Positives = 114/238 (47%), Gaps = 44/238 (18%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-F 164
+ ++ +Q +R IT I+LHAG+IH+ N+L + IG +E G +R VY+ +G F
Sbjct: 324 DINQSPEPNQWFRFITPIFLHAGLIHIGFNLLLQMTIGKEMEIAIGSIRFFLVYVSAGIF 383
Query: 165 G---------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAV 200
G GA LF A++LL LL + L+ +++ I I+ +
Sbjct: 384 GNVMGANYAGVMAASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFILLDIVISFVL 443
Query: 201 GILPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFG-----WAERHQLPAQARVKSRHN 250
G+LP +DNFAHIGGF+ G LG +L LR + G +A P Q N
Sbjct: 444 GLLPGLDNFAHIGGFLMGLALGVCVLHSPNSLRRKMGAEDPSYASMQLNPNQGPPHFLKN 503
Query: 251 PYQYVLCIVAL----VLLIVGFTVGLVMLFRGENGN-----DHCSWCHYLSCVPTSKW 299
P + L L+ GF + +V++F N + CSWC YLSC+P + W
Sbjct: 504 PVGFFKGRKPLWWAWWLVRAGFLLTVVIVFIVLLNNFYIYHNTCSWCKYLSCIPVNNW 561
>gi|336266774|ref|XP_003348154.1| hypothetical protein SMAC_03999 [Sordaria macrospora k-hell]
gi|380091090|emb|CCC11296.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 555
Score = 86.3 bits (212), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/239 (31%), Positives = 106/239 (44%), Gaps = 47/239 (19%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
+ V +Q WR IT ++LHAGVIH+ NML + IG +E+ G +R VY+ +G FG
Sbjct: 274 ENVPEPNQWWRFITPMFLHAGVIHIGFNMLLQMTIGREMERSIGSIRFFIVYVSAGIFGF 333
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A+ LL LL + LL + + I I +G+
Sbjct: 334 VMGGNFAANGMQTTGASGALFGVIALLLLDLLYSWRDRKSPWKDLLFIALDIVIAFVLGL 393
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRH------------- 249
LP +DNFAHIGGF+AG LG +L P P ++V +
Sbjct: 394 LPGLDNFAHIGGFLAGLALGICVLQSPNALRRRIGDEPPYSQVVDTNGFLRQGAPPSFFS 453
Query: 250 ---------NPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
P +V +V L + + +V+L + CSWC YLSC+P W
Sbjct: 454 NPVGFFKGRKPLWWVWWLVRAAFLTLIVAIFIVLLNNFYVDHKECSWCKYLSCLPVKNW 512
>gi|408397516|gb|EKJ76658.1| hypothetical protein FPSE_03208 [Fusarium pseudograminearum CS3096]
Length = 570
Score = 85.9 bits (211), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 104/237 (43%), Gaps = 43/237 (18%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-F 164
+ ++ +Q +R IT I++HAG+IH++ N+L + I +E G VR VY+ +G F
Sbjct: 322 DINQSPEPNQWYRFITSIFMHAGIIHIVFNLLLQLTIAKEMEMAIGPVRFLLVYMSAGIF 381
Query: 165 G---------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAV 200
G GA LF A+ LL LL LL +V+ + I +
Sbjct: 382 GNIMGGNYAPPGQPSVGASGALFGIIALVLLDLLYSWKDRRSPVKDLLFIVLDMVIAFVL 441
Query: 201 GILPHVDNFAHIGGFMAGFLLGFVLL------------------LRPQFGWAERHQLPAQ 242
G+LP +DNF HIGGF+ G LG +L + PQ G H
Sbjct: 442 GLLPGLDNFVHIGGFLMGLSLGVCVLHSPNSLRRRMGDGLSYAAVSPQTGETPPHFFKNP 501
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
P + +V L++ V +V+L +D C WC YL+C+P + W
Sbjct: 502 VGFFKGRKPLWWAWWLVRAAFLVMIIVVFIVLLNNFYKYHDTCEWCKYLNCLPINDW 558
>gi|453087192|gb|EMF15233.1| rhomboid-domain-containing protein [Mycosphaerella populorum
SO2202]
Length = 503
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 105/238 (44%), Gaps = 53/238 (22%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D Q WR I I++HAG+IH+ N+L V +G +E G VR +Y SG FG
Sbjct: 242 DDTPAPDQWWRFIVPIFIHAGIIHIGFNLLLQVTLGRDVELLIGSVRFAILYFASGIFGF 301
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A++LL LL L+ +++ I I +G+
Sbjct: 302 ILGGNFAATGIASCGASGSLFGILAITLLDLLYTWKDRRSPIKDLMFIIIDILIAFVLGL 361
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRP----------------QFGWAERHQLPAQARVK 246
LP +DNF+HIGGF+ G +LG LL P + + +K
Sbjct: 362 LPGLDNFSHIGGFLMGLVLGVCLLRSPAVIARRTSAMIDPVYTHVAYQNDRNASMKTFIK 421
Query: 247 SRHNPYQ---------YVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
++ + + +ALV ++VGF + L + NG CSWC YLSC+P
Sbjct: 422 DPVGHFKDRRGLWWAWWAVRAIALVGVLVGFILLLKNFYVWRNG---CSWCKYLSCLP 476
>gi|327300028|ref|XP_003234707.1| rhomboid family membrane protein [Trichophyton rubrum CBS 118892]
gi|326463601|gb|EGD89054.1| rhomboid family membrane protein [Trichophyton rubrum CBS 118892]
Length = 497
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 72/240 (30%), Positives = 107/240 (44%), Gaps = 51/240 (21%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R I ++LHAG++H+ N+ + + IG +E+ G+ R VY SG FG
Sbjct: 241 DDKPEPNQWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGF 300
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A+ +L L L +V+ +AI+ +G+
Sbjct: 301 VLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGL 360
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQ------------------FGWAERHQLPAQAR 244
LP +DNF+HIGGF+ G +LG +L P FG E + +
Sbjct: 361 LPGLDNFSHIGGFLTGLVLGICILRSPDTLRERIGVKTPYVSMGGNFGVDEDQKKFFKQP 420
Query: 245 VK--SRHNPY---QYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
V P ++L AL+ +IV F V L ++ CSWC YLSC+P S W
Sbjct: 421 VSFFQGRKPLWWGWWLLRAGALIGIIVSFIVLLNNFYKYRTT---CSWCKYLSCLPISNW 477
>gi|409083166|gb|EKM83523.1| hypothetical protein AGABI1DRAFT_110173 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 493
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 98/209 (46%), Gaps = 40/209 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-----FGGAYY 169
Q +R IT I+LHAG+IH L NML F+ ++E++ G Y +G GG +
Sbjct: 283 QWFRFITPIFLHAGIIHFLLNMLGQWFLSAQIEREMGSAGFIITYFAAGIFGNVLGGNFA 342
Query: 170 LLFLFNAVSLLVLLAAALLTLVVIIA--------------------INLAVGILPHVDNF 209
L+ + + + ++ +T V +IA I++A+G +P+VDNF
Sbjct: 343 LVGIPSVGASGAIMGTLAVTWVDLIAHWKYHYRPVRQLIFMFIELLISIAIGYIPYVDNF 402
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
AHIGGF+ G +G V P +RH++ + + A+ L ++ F
Sbjct: 403 AHIGGFVMGLFVGIVFY--PIISVTKRHRI------------ISWTFKLAAIPLAVILFV 448
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
V L F + C+ C YLSC+PTS
Sbjct: 449 V-LTRNFYTSDPYAACTGCRYLSCIPTSS 476
>gi|432868050|ref|XP_004071386.1| PREDICTED: inactive rhomboid protein 1-like [Oryzias latipes]
Length = 860
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 62/213 (29%), Positives = 99/213 (46%), Gaps = 41/213 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L +++ + I LE+ G++R+ +Y+LSG G A +L
Sbjct: 657 QFYRLWLSLFLHAGILHCLVSVVFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 716
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A + L+ ++ G+LP +DNFA
Sbjct: 717 PYRAEVGPAGSQFGILACLFVELFQSWQILAEPWRAFIKLLCVVIFLFIFGLLPWIDNFA 776
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG R + Y+ I+ +L+ VG
Sbjct: 777 HISGFISGFFLSFAFLPYISFG---------------RMDLYRKRCQIIVFLLVFVGLFS 821
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
GLV+LF C WC +L+C+P + C
Sbjct: 822 GLVVLFYVYPIK--CDWCEFLTCIPFTDKFCEK 852
>gi|326430143|gb|EGD75713.1| hypothetical protein PTSG_07830 [Salpingoeca sp. ATCC 50818]
Length = 628
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 96/208 (46%), Gaps = 39/208 (18%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
+Q +RL T +++HAG I L+ M + G ++E Q GF+R VY +SG GG
Sbjct: 429 NQWFRLFTSLFIHAGAIQLVIIMSIQWYAGRQIETQAGFLRTFLVYFISGVGGTTIAAIF 488
Query: 167 -----------AYY------LLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNF 209
A Y L+ L LL LL LV IIA L VG LP +DN+
Sbjct: 489 SPNLVTTGANPAVYGLLGCVLVELLQTWQLLEKPWLQLLKLVAIIAFLLLVGTLPFLDNW 548
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
+H+GGF G + G V L FG + + + +L V LLI F
Sbjct: 549 SHVGGFAFGVVAGIVFLPYITFGEWDVAR--------------KRLLFFVCFPLLIGMFI 594
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTS 297
V ++ +N N CSWC Y++C+P S
Sbjct: 595 AAFVTFYQIQNTN-FCSWCDYVNCIPYS 621
>gi|167526511|ref|XP_001747589.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774035|gb|EDQ87669.1| predicted protein [Monosiga brevicollis MX1]
Length = 883
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/214 (29%), Positives = 98/214 (45%), Gaps = 41/214 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q WR IT ++ HA V H + +++ + G ++E G +R +Y +SG GG
Sbjct: 684 QWWRFITPLFFHASVAHAILVLIAQYYYGRKMETHIGAMRSLLIYFISGIGGTCIAAVFS 743
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A +L+ LF + L+ +L L +IA+ L VG +VDN++
Sbjct: 744 PLDVSVGTNPSVYGILAVHLVDLFQSWQLVDRPGLSLAGLGGVIAVLLLVGTTSYVDNWS 803
Query: 211 HIGGFMAGFLLGFVLLLRPQFG-WAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
HIGGF G + G + + FG W AR + +L + LL+V F
Sbjct: 804 HIGGFAFGLVSGIIFIPYITFGKW-------DLARKR--------LLLFICAPLLLVMFV 848
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
V ++ +N + CSWC YL+CVP + CG
Sbjct: 849 AAFVTFYQIQN-TEFCSWCDYLNCVPYADGMCGR 881
>gi|58268562|ref|XP_571437.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227672|gb|AAW44130.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 422
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/215 (32%), Positives = 100/215 (46%), Gaps = 49/215 (22%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------- 165
Q WR I I+LH G+IHL+ NML + + ++E++ G + VY+L G +G
Sbjct: 184 DQWWRFILPIFLHVGIIHLIVNMLVQIIVSAQVEREMGTIPFLIVYMLGGIYGFVLGGNF 243
Query: 166 --------GAYYLLFLFNAVSLLVL-----------LAAALLTLVVIIAINLAVGILPH- 205
GA LF NA L+ L L A LL L +I A+G +P+
Sbjct: 244 TRTGIPSVGASGALFATNACVLVDLVLHWKYEERPKLKAFLLFLEFVIG--FAMGYIPNA 301
Query: 206 VDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVL--CIVALVL 263
VD AH+GG+ G L G +L PA K R +YV+ C V +
Sbjct: 302 VDGLAHLGGWAMGILCGTIL-------------YPAITETKRR----KYVIWGCRVVALA 344
Query: 264 LIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
LI+ V + F ++ N+ C WC YL+C+PTS
Sbjct: 345 LIIMAMVMTIKNFYTDDPNEACEWCKYLACIPTSS 379
>gi|328773737|gb|EGF83774.1| hypothetical protein BATDEDRAFT_3368, partial [Batrachochytrium
dendrobatidis JAM81]
Length = 293
Score = 85.5 bits (210), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/210 (30%), Positives = 101/210 (48%), Gaps = 44/210 (20%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS--------- 162
H Q +R I LH G++H+L NM + G++LE+ G+ R+ +Y+ S
Sbjct: 102 HPDQWFRFFVPIMLHGGIVHILFNMSFQLQTGLQLEKDMGWWRMALIYIGSGVGGFVFGA 161
Query: 163 ----------GFGGAYY------LLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHV 206
G G+ Y LL L SL+ LL +V I +L +G+LP++
Sbjct: 162 SLSDVRVPSVGASGSLYGMVACLLLDLIQNWSLIKRPWIELLKMVGNIIFSLLLGMLPYI 221
Query: 207 DNFAHIGGFMAGFLLGFVLLLRPQFG-WAERHQLPAQARVKSRHNPYQYVLCIVALVLLI 265
DN AH+GGF+ G LG + + + FG W +R ++ L + AL LI
Sbjct: 222 DNLAHVGGFITGICLGILFMPKIYFGKWDKRR---------------KFALMVAALPALI 266
Query: 266 VGFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
V F +VM +G+++C+WC Y +C+P
Sbjct: 267 VFF---VVMTKSFYDGSNNCTWCKYFNCLP 293
>gi|357453415|ref|XP_003596984.1| Rhomboid family member [Medicago truncatula]
gi|355486032|gb|AES67235.1| Rhomboid family member [Medicago truncatula]
Length = 221
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 56/81 (69%)
Query: 85 PLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGI 144
P+ NPL G S TL K+GA+ + + H +RL TC+WLHAGVI LL NML++++ I
Sbjct: 122 PITHNPLMGSSPLTLVKMGAMYFQKSDRLHHAYRLFTCLWLHAGVIDLLLNMLNILYYYI 181
Query: 145 RLEQQFGFVRVGFVYLLSGFG 165
LE++FG++R+ ++ +SG G
Sbjct: 182 YLEKKFGYIRIAILHTMSGMG 202
>gi|189207869|ref|XP_001940268.1| rhomboid family membrane protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187976361|gb|EDU42987.1| rhomboid family membrane protein [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 542
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 115/261 (44%), Gaps = 59/261 (22%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHE-HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
L G S + G +D E +Q WR IT I+LHAG+IH+ NML +G +E++
Sbjct: 240 LCGMGSGVPDQTGITRFDDHSREPNQWWRFITPIFLHAGLIHIGFNMLLQWTLGRDMEKE 299
Query: 150 FGFVRVGFVYLLSG-----FGGAYYL-----------LFLFNAVSLLVLL---------A 184
G +R VY +G GG Y LF A+++L LL
Sbjct: 300 IGPLRFLLVYFSAGIFGFVLGGNYAPEGLTSVGCSGSLFGILALTMLDLLYNWSTRRSPV 359
Query: 185 AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQ------------FG 232
LL L++ +AI +G+LP +DNF+HIGGF G +LG ++ PQ +
Sbjct: 360 KDLLFLLLDMAIAFVIGLLPGLDNFSHIGGFCMGLVLGICIIHSPQSLRARTGMNEPPYA 419
Query: 233 WAERHQL-PAQARVKSRHNPYQ-----------------YVLCIVALVLLIVGFTVGLVM 274
+ L P K++ + + +VL LV + +GF + L
Sbjct: 420 TVDTQPLAPTAEESKTKISAFAKQPVGFFKGRKPLWWAWWVLRAGGLVAVFIGFILLLRN 479
Query: 275 LFRGENGNDHCSWCHYLSCVP 295
+ N CSWC +LSC+P
Sbjct: 480 FYEWRN---TCSWCKHLSCLP 497
>gi|68479248|ref|XP_716303.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
gi|46437969|gb|EAK97307.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
Length = 669
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 62/242 (25%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
Q +R+ I+LHAG +H++ N+L V +G +E+ G ++ +Y+ SG GG
Sbjct: 307 DQWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIGIIKYAIIYISSGIGGFLLGANF 366
Query: 167 ---------AYYLLFLFNAVSLLVLLAA-------------ALLTLVVI--IAINLAVGI 202
A LF A ++++ + AL ++I I I+L +G+
Sbjct: 367 TPQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVLGL 426
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRP-------------------QF--GWAERHQLPA 241
LP +DNF+HIGGF G L V+L P QF W + +
Sbjct: 427 LPGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDGIITYPKNPSTWQQFLNNWNPMYSI-- 484
Query: 242 QARVKSRHNPYQYVLC---IVALVLLIVGFTVGLVMLFRGE-NGNDHCSWCHYLSCVPTS 297
+ +++SR ++ C I+AL+L+I+ + F + N ++C WC Y +C+P
Sbjct: 485 EDKIRSRF----FIWCGVRIIALILMIIYLVLLCKNFFNNDINRGNNCKWCKYFNCIPVK 540
Query: 298 KW 299
W
Sbjct: 541 GW 542
>gi|400602302|gb|EJP69904.1| rhomboid family protein [Beauveria bassiana ARSEF 2860]
Length = 517
Score = 85.1 bits (209), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/234 (29%), Positives = 103/234 (44%), Gaps = 42/234 (17%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D+ Q +R I I++HAG+IH+ N+L + + +EQ G +R VY+ +G FG
Sbjct: 274 DQNPAPDQWYRFIIPIFMHAGIIHIGFNLLLQLTVAKEMEQAIGSIRFFLVYMSAGIFGF 333
Query: 166 --------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGI 202
GA LF A++LL LL L+ ++V + I +G+
Sbjct: 334 VMGGNFAAPGIASTGASGSLFGIIALTLLDLLYSWSERRSPVKDLMFIIVDMVIAFVLGL 393
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSR---HNPYQYVLC-- 257
LP +DNF+HIGGF+ G LG +L P + A + V+ H P+
Sbjct: 394 LPGLDNFSHIGGFLMGLALGICVLHSPNALRRRLDEGMAYSAVQGGQGVHPPFHKSPVGF 453
Query: 258 ------------IVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
IV +LI V +V+L D C WC YLSC+P W
Sbjct: 454 FRGRKALWWAWWIVRAAVLITIIVVFIVLLNNFYKLGDQCGWCKYLSCLPIKDW 507
>gi|238878377|gb|EEQ42015.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 669
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 62/242 (25%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
Q +R+ I+LHAG +H++ N+L V +G +E+ G ++ +Y+ SG GG
Sbjct: 307 DQWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIGIIKYAIIYISSGIGGFLLGANF 366
Query: 167 ---------AYYLLFLFNAVSLLVLLAA-------------ALLTLVVI--IAINLAVGI 202
A LF A ++++ + AL ++I I I+L +G+
Sbjct: 367 TPQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVLGL 426
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRP-------------------QF--GWAERHQLPA 241
LP +DNF+HIGGF G L V+L P QF W + +
Sbjct: 427 LPGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDGIITYPKNPSTWQQFLNNWNPMYSI-- 484
Query: 242 QARVKSRHNPYQYVLC---IVALVLLIVGFTVGLVMLFRGE-NGNDHCSWCHYLSCVPTS 297
+ +++SR ++ C I+AL+L+I+ + F + N ++C WC Y +C+P
Sbjct: 485 EDKIRSRF----FIWCGVRIIALILMIIYLVLLCKNFFNNDINRGNNCKWCKYFNCIPVK 540
Query: 298 KW 299
W
Sbjct: 541 GW 542
>gi|241950141|ref|XP_002417793.1| conserved hypothetical protein [Candida dubliniensis CD36]
gi|223641131|emb|CAX45507.1| conserved hypothetical protein [Candida dubliniensis CD36]
Length = 666
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/241 (27%), Positives = 109/241 (45%), Gaps = 62/241 (25%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +R+ I+LHAG +H++ N+L V +G +E+ G ++ +Y+ SG GG
Sbjct: 314 QWYRIFIPIFLHAGFLHIIFNLLLQVTMGASIERNIGIIKYAIIYISSGIGGFLLGANFT 373
Query: 167 --------AYYLLFLFNAVSLLVLLAA-------------ALLTLVVI--IAINLAVGIL 203
A LF A ++++ + AL ++I I I+L +G+L
Sbjct: 374 PQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVLGLL 433
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRP-------------------QF--GWAERHQLPAQ 242
P +DNF+HIGGF G L V+L P QF W + + +
Sbjct: 434 PGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDGIITYPKNPSTWQQFLNNWNPMYSI--E 491
Query: 243 ARVKSRHNPYQYVLC---IVALVLLIVGFTVGLVMLFRGE-NGNDHCSWCHYLSCVPTSK 298
++ SR YV C ++ALVL+I+ + F + + ++C WC Y +C+P
Sbjct: 492 DKIPSRF----YVWCGVRVIALVLMIIYLVLLCKNFFNNDIDRGNNCKWCKYFNCIPVKG 547
Query: 299 W 299
W
Sbjct: 548 W 548
>gi|429852564|gb|ELA27696.1| rhomboid family membrane protein [Colletotrichum gloeosporioides
Nara gc5]
Length = 606
Score = 85.1 bits (209), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 110/238 (46%), Gaps = 47/238 (19%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D+ Q +R IT I+LHAG+IH+ N+L + IG +E G +R VY+ +G FG
Sbjct: 358 DQSPEPDQWFRFITPIFLHAGLIHIGFNLLLQMTIGKEMEIAIGSIRFFLVYVSAGIFGN 417
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A++LL LL + L+ +++ I I+ +G+
Sbjct: 418 VMGANYAGVMTASTGASGALFGVIALTLLDLLYSWKDRRSPVKDLMFIMLDIVISFVLGL 477
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRP----------------QFGWAERHQLPAQAR-- 244
LP +DNFAHIGGF+ G LG +L P Q A + P+ R
Sbjct: 478 LPGLDNFAHIGGFLMGLALGICVLHSPNSLRRRLGTDPSYASMQLNPANQGAGPSFLRNP 537
Query: 245 ---VKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
K R P + +V L+ V +V+L ++ CSWC YLSC+P + W
Sbjct: 538 VGFFKGR-KPLWWAWWLVRAGFLLTVIIVFIVLLNNFYVYHNTCSWCKYLSCIPVNNW 594
>gi|68479117|ref|XP_716364.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
gi|46438031|gb|EAK97368.1| potential Rhomboid family membrane protein [Candida albicans
SC5314]
Length = 669
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 110/242 (45%), Gaps = 62/242 (25%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
Q +R+ I+LHAG +H++ N+L V +G +E+ G ++ +Y+ SG GG
Sbjct: 307 DQWYRIFIPIFLHAGFLHIIFNLLLQVTMGSSIERNIGIIKYAIIYISSGIGGFLLGANF 366
Query: 167 ---------AYYLLFLFNAVSLLVLLAA-------------ALLTLVVI--IAINLAVGI 202
A LF A ++++ + AL ++I I I+L +G+
Sbjct: 367 TPQGIASTGASGALFGIVATNIILFIYTGKKNTNMYGTKHYALFICIMIGEIVISLVLGL 426
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRP-------------------QF--GWAERHQLPA 241
LP +DNF+HIGGF G L V+L P QF W + +
Sbjct: 427 LPGLDNFSHIGGFAMGILSSIVVLKDPFWVFIDGIITYPKNPSTWQQFLNNWNPMYSI-- 484
Query: 242 QARVKSRHNPYQYVLC---IVALVLLIVGFTVGLVMLFRGE-NGNDHCSWCHYLSCVPTS 297
+ +++SR ++ C I+AL+L+I+ + F + N ++C WC Y +C+P
Sbjct: 485 EDKIRSRF----FIWCGVRIIALILMIIYLVLLCKNFFNNDINRGNNCKWCKYFNCIPVK 540
Query: 298 KW 299
W
Sbjct: 541 GW 542
>gi|397645545|gb|EJK76880.1| hypothetical protein THAOC_01334 [Thalassiosira oceanica]
Length = 326
Score = 84.7 bits (208), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 115/247 (46%), Gaps = 50/247 (20%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ GPS+ TL LGA + +V E + WRL+T LHAG+IH NM +L ++ +E
Sbjct: 1 MIGPSAETLVALGAKDSFLIVVEQEVWRLVTSGVLHAGLIHYFINMFALFYVAKAVESVH 60
Query: 151 GFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLAAALLTLVV----------- 192
GF V ++++S GG +FL ++ +L L+ A L +++
Sbjct: 61 GFWAVSTLFVISSTGGTILSAIFLPQYITVGASGGILGLIGACLSDIILNWNLLFNDFVN 120
Query: 193 ------------------IIAINLAVGILPHVDNFAHIGGFMAGFLLGF--VLLLRPQFG 232
+ +N+ +G+ P VDN++H+GG M GFL G + ++ P+F
Sbjct: 121 PERRSRFAHAKVLVVLLLDVVVNIIIGMTPFVDNWSHVGGMMYGFLCGLSTIHMVSPRFF 180
Query: 233 WAERHQLPAQARVKSRHNPYQYV-LCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYL 291
ER R + Y+ V L V ++ + GF ++LF G+ + C C Y
Sbjct: 181 GDER-----------RSHKYRLVTLRSVGFLVGVAGFISSSIVLFSGDGVTNLCPDCTYS 229
Query: 292 SCVPTSK 298
+ +S+
Sbjct: 230 KSIVSSR 236
>gi|342874669|gb|EGU76647.1| hypothetical protein FOXB_12836 [Fusarium oxysporum Fo5176]
Length = 572
Score = 84.3 bits (207), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 105/237 (44%), Gaps = 43/237 (18%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-F 164
+ ++ +Q +R IT I++HAG+IH++ N+L + I +E G VR VY+ +G F
Sbjct: 320 DINQSPEPNQWYRFITSIFMHAGLIHIIFNLLLQLTIAKEMEMAIGPVRFLLVYMSAGIF 379
Query: 165 G---------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAV 200
G GA LF A+ LL LL + LL +++ + I +
Sbjct: 380 GNIMGGNYAPPGQPSVGASGALFGIIALVLLDLLYSWKDRRNPVKDLLFIILDMVIAFVL 439
Query: 201 GILPHVDNFAHIGGFMAGFLLGFVLL------------------LRPQFGWAERHQLPAQ 242
G+LP +DNF HIGGF+ G LG +L + PQ G H
Sbjct: 440 GLLPGLDNFVHIGGFLMGLSLGVCVLHSPNSLRRRMGQELSYAAVSPQTGETPPHFFKNP 499
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
P + +V L++ V +V+L +D C WC YL+C+P + W
Sbjct: 500 VGFFKGRKPLWWAWWLVRAAFLVMIIVVFIVLLNNFYKYHDTCEWCKYLNCLPINDW 556
>gi|336472615|gb|EGO60775.1| hypothetical protein NEUTE1DRAFT_76205 [Neurospora tetrasperma FGSC
2508]
gi|350294152|gb|EGZ75237.1| rhomboid-domain-containing protein [Neurospora tetrasperma FGSC
2509]
Length = 550
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 106/239 (44%), Gaps = 47/239 (19%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
+ V +Q WR IT ++LHAGVIH+ NML + IG +E+ G +R VY+ +G FG
Sbjct: 273 ESVPEPNQWWRFITPMFLHAGVIHIGFNMLLQMTIGKEMERSIGSIRFFIVYVSAGIFGF 332
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A+ LL LL + LL + + I I+ +G+
Sbjct: 333 VMGGNFAANGMQTTGASGALFGIIALLLLDLLYSWRDRKSPWKDLLFIGLDIVISFVLGL 392
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRH------------- 249
LP +DNFAHIGGF+ G LG +L P P ++V +
Sbjct: 393 LPGLDNFAHIGGFLTGLALGICVLQSPNALRRRIGDEPPYSQVVDTNGFLRQGAPPSFFS 452
Query: 250 ---------NPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
P +V +V L + + +++L + CSWC YLSC+P W
Sbjct: 453 NPVGFFKGRKPLWWVWWLVRAAFLTLTVVIFILLLNNFYVDHKECSWCKYLSCLPVKNW 511
>gi|85102797|ref|XP_961391.1| hypothetical protein NCU01305 [Neurospora crassa OR74A]
gi|16944591|emb|CAC18292.2| related to membrane protein [Neurospora crassa]
gi|28922936|gb|EAA32155.1| predicted protein [Neurospora crassa OR74A]
Length = 548
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/239 (30%), Positives = 106/239 (44%), Gaps = 47/239 (19%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
+ V +Q WR IT ++LHAGVIH+ NML + IG +E+ G +R VY+ +G FG
Sbjct: 273 ESVPEPNQWWRFITPMFLHAGVIHIGFNMLLQMTIGKEMERSIGSIRFFIVYVSAGIFGF 332
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A+ LL LL + LL + + I I+ +G+
Sbjct: 333 VMGGNFAANGMQTTGASGALFGIIALLLLDLLYSWRDRKSPWKDLLFIGLDIVISFVLGL 392
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRH------------- 249
LP +DNFAHIGGF+AG LG +L P P ++V +
Sbjct: 393 LPGLDNFAHIGGFLAGLALGICVLQSPNALRRRIGDEPPYSQVVDTNGFLRQGAPPSFFS 452
Query: 250 ---------NPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
P + +V L + + +++L + CSWC YLSC+P W
Sbjct: 453 NPVGFFKGRKPLWWAWWLVRAAFLTLTVVIFILLLNNFYVDHKECSWCKYLSCLPVKNW 511
>gi|190346548|gb|EDK38656.2| hypothetical protein PGUG_02754 [Meyerozyma guilliermondii ATCC
6260]
Length = 648
Score = 84.3 bits (207), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 64/253 (25%)
Query: 104 ALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG 163
+E++R Q +R+IT I+LHAG +H++ N+L V +G +E+Q G ++ +YL+SG
Sbjct: 298 PIEYNRY-EPDQWYRIITPIFLHAGFLHIIFNLLLQVTMGASIERQIGVIKFAIIYLMSG 356
Query: 164 FG----------------GAYYLLFLFNAVSLLVLLAAA---------------LLTLVV 192
G G LF A ++++ + + ++
Sbjct: 357 IGGFVLGANFSPNGIASTGCSGALFGIVATNIIMFVYCGRKNTNLYGTKHYVLFIFIMLT 416
Query: 193 IIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE----------------- 235
I ++ +G+LP +DNF+H+GGF G L +LL P F + +
Sbjct: 417 EIVVSFVLGLLPGLDNFSHLGGFAMGLLTSILLLQDPFFVYVDGIITYSGRDSIWDEFVN 476
Query: 236 --------RHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDH-CS 286
++P++ + VL ++ + LLIV F + E ND C+
Sbjct: 477 NWNPFYNWESKIPSRVYMWFGVRAVCLVLAVLYMALLIVNF------FGKPELDNDKSCA 530
Query: 287 WCHYLSCVPTSKW 299
WC Y +C+P + W
Sbjct: 531 WCKYFNCIPVNGW 543
>gi|146418118|ref|XP_001485025.1| hypothetical protein PGUG_02754 [Meyerozyma guilliermondii ATCC
6260]
Length = 648
Score = 84.3 bits (207), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/253 (24%), Positives = 111/253 (43%), Gaps = 64/253 (25%)
Query: 104 ALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG 163
+E++R Q +R+IT I+LHAG +H++ N+L V +G +E+Q G ++ +YL+SG
Sbjct: 298 PIEYNRY-EPDQWYRIITPIFLHAGFLHIIFNLLLQVTMGASIERQIGVIKFAIIYLMSG 356
Query: 164 FG----------------GAYYLLFLFNAVSLLVLLAAA---------------LLTLVV 192
G G LF A ++++ + + ++
Sbjct: 357 IGGFVLGANFSPNGIASTGCSGALFGIVATNIIMFVYCGRKNTNLYGTKHYVLFIFIMLT 416
Query: 193 IIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE----------------- 235
I ++ +G+LP +DNF+H+GGF G L +LL P F + +
Sbjct: 417 EIVVSFVLGLLPGLDNFSHLGGFAMGLLTSILLLQDPFFVYVDGIITYSGRDSIWDEFVN 476
Query: 236 --------RHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDH-CS 286
++P++ + VL ++ + LLIV F + E ND C+
Sbjct: 477 NWNPFYNWESKIPSRVYMWFGVRAVCLVLAVLYMALLIVNF------FGKPELDNDKSCA 530
Query: 287 WCHYLSCVPTSKW 299
WC Y +C+P + W
Sbjct: 531 WCKYFNCIPVNGW 543
>gi|308198230|ref|XP_001386926.2| Rhomboid-related protein 1 (RRP) (Rhomboid-like protein 1)
[Scheffersomyces stipitis CBS 6054]
gi|149388924|gb|EAZ62903.2| Rhomboid-related protein 1 (RRP) (Rhomboid-like protein 1)
[Scheffersomyces stipitis CBS 6054]
Length = 556
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 107/242 (44%), Gaps = 50/242 (20%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG- 166
D Q +R+IT I+LHAG +H++ N+L + +G +E+ G ++ +YL SG G
Sbjct: 291 DNKFIPDQWYRVITPIFLHAGFLHIIFNLLLQITMGSSIERHIGVLKYAIIYLSSGIAGF 350
Query: 167 ---------------AYYLLFLFNAVSLLVLLAAA---------------LLTLVVIIAI 196
A LF A ++L+ + + +V I I
Sbjct: 351 LLGANFTPQGIASTGASGALFGIVATNILLFIYCGRKNTNLYGTRHYVLFICIMVGEIII 410
Query: 197 NLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE-----RHQLPAQARVKSRHNP 251
+L +G+LP +DNF+HIGGF G L V L P F + + + + + NP
Sbjct: 411 SLVLGLLPGLDNFSHIGGFAMGVLTAVVFLPDPFFVYIDGIITYKGNATTWEQFVNAWNP 470
Query: 252 YQ----------YVLC---IVALVLLIVGFTVGLVMLFRG-ENGNDHCSWCHYLSCVPTS 297
+ Y+ C +V LVL IV + + F E+ CSWC Y++C+P +
Sbjct: 471 FYAWEDKIPLRFYIWCGFRVVCLVLAIVYLAMLIKNFFTNTESPESRCSWCKYINCIPVN 530
Query: 298 KW 299
W
Sbjct: 531 GW 532
>gi|330924089|ref|XP_003300510.1| hypothetical protein PTT_11758 [Pyrenophora teres f. teres 0-1]
gi|311325347|gb|EFQ91395.1| hypothetical protein PTT_11758 [Pyrenophora teres f. teres 0-1]
Length = 545
Score = 84.0 bits (206), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 76/261 (29%), Positives = 115/261 (44%), Gaps = 59/261 (22%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHE-HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
L G S + G +++ HE +Q WR IT I+LHAG+IH+ NML +G +E++
Sbjct: 242 LCGMGSGVPDQTGITKFNDHSHEPNQWWRFITPIFLHAGIIHIGFNMLLQWTLGRDMEKE 301
Query: 150 FGFVRVGFVYLLSG-----FGGAYYL-----------LFLFNAVSLLVLL---------A 184
G +R VY +G GG Y LF A+++L LL
Sbjct: 302 IGPLRFLLVYFSAGIFGFVLGGNYAPEGLTSVGCSGSLFGILALTMLDLLYNWSTRRSPV 361
Query: 185 AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQ------------FG 232
LL L++ +AI +G+LP +DNF+HIGGF G +LG ++ PQ +
Sbjct: 362 KDLLFLLLDMAIAFVIGLLPGLDNFSHIGGFCMGLVLGICIIHSPQSLRARTGMNEPPYA 421
Query: 233 WAERHQL-PAQARVKSRHNPYQ-----------------YVLCIVALVLLIVGFTVGLVM 274
+ L P K++ + +VL LV + +GF + L
Sbjct: 422 TVDTQPLAPTAEESKNKIAAFAKQPVGFFKGRKPLWWAWWVLRAGGLVAVFIGFVLLLRN 481
Query: 275 LFRGENGNDHCSWCHYLSCVP 295
+ N C WC +LSC+P
Sbjct: 482 FYEWRN---TCGWCKHLSCLP 499
>gi|315042361|ref|XP_003170557.1| rhomboid family membrane protein [Arthroderma gypseum CBS 118893]
gi|311345591|gb|EFR04794.1| rhomboid family membrane protein [Arthroderma gypseum CBS 118893]
Length = 498
Score = 84.0 bits (206), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 108/241 (44%), Gaps = 53/241 (21%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R I ++LHAG++H+ N+ + + IG +E+ G+ R VY SG FG
Sbjct: 242 DDKPEPNQWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERAIGWWRYAIVYFSSGIFGF 301
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A+ +L L L+ +++ +AI+ +G+
Sbjct: 302 VLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLMFMLITVAISFVLGL 361
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA------------QARVKSRHN 250
LP +DNF+HIGGF+ G +LG +L P ER + + + K
Sbjct: 362 LPGLDNFSHIGGFLTGLVLGICILRSPD-TLRERIGVKTPYVSMGGNVGADEDQKKFYKQ 420
Query: 251 PYQY------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
P + +L AL+ +IV F V + ++ CSWC YLSC+P S
Sbjct: 421 PVSFFQGRKPLWWGWWLLRAGALIGIIVSFIVLINNFYKYRT---TCSWCKYLSCLPISN 477
Query: 299 W 299
W
Sbjct: 478 W 478
>gi|403411581|emb|CCL98281.1| predicted protein [Fibroporia radiculosa]
Length = 1317
Score = 84.0 bits (206), Expect = 9e-14, Method: Composition-based stats.
Identities = 86/332 (25%), Positives = 135/332 (40%), Gaps = 97/332 (29%)
Query: 32 GSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPL 91
G Q ++++ M +A + V I + +N+ + +SF+P NP+
Sbjct: 996 GVGVQKRAYVVWMLTLAMLGVLIYELVVNDKAQGT-------------PISFKP-AVNPM 1041
Query: 92 FGPSSSTLQKLGAL--EWDRVV----------------------------------HE-- 113
GPS S L LGA ++V H+
Sbjct: 1042 LGPSGSALINLGARFPACMKIVSGIPLSTELPCLNDTANPVTSACPLEDVCGFGGFHDET 1101
Query: 114 -HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-----FGGA 167
+Q +R IT I+LHAG+IH L NML+ + ++E++ G V +Y+ SG GG
Sbjct: 1102 PNQWFRFITPIFLHAGIIHYLLNMLAQTTVSAQVEREMGSVFFLVLYIASGTFGNVLGGN 1161
Query: 168 YYL-----------LFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHVD 207
+ L +F A++ + L A L +VV + I + +G +P+VD
Sbjct: 1162 FALVGQPSVGASGAIFGTTAIAWIDLFAHWRYQYRPGTKLAWMVVELVIGVGLGFIPYVD 1221
Query: 208 NFAH--IGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLI 265
NFAH + F ++ P +RH L ++A+ + I
Sbjct: 1222 NFAHLGGLLMGLLVGMAFYPIISPS----------------ARHRTIVITLRLIAIPVAI 1265
Query: 266 VGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
V F V L+ F N CSWC YLSC+PTS
Sbjct: 1266 VLFVV-LIRNFYTSNPYAACSWCRYLSCIPTS 1296
>gi|326473553|gb|EGD97562.1| rhomboid family membrane protein [Trichophyton tonsurans CBS
112818]
gi|326480224|gb|EGE04234.1| rhomboid family membrane protein [Trichophyton equinum CBS 127.97]
Length = 497
Score = 83.6 bits (205), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 107/241 (44%), Gaps = 53/241 (21%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R I ++LHAG++H+ N+ + + IG +E+ G+ R VY SG FG
Sbjct: 241 DDEPEPNQWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGF 300
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A+ +L L L +V+ +AI+ +G+
Sbjct: 301 VLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGL 360
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA------------QARVKSRHN 250
LP +DNF+HIGGF+ G +LG +L P ER + + + K
Sbjct: 361 LPGLDNFSHIGGFLTGLVLGICILRSPD-TLRERIGVKTPYVSMGGNLGVDEDQKKFFKQ 419
Query: 251 PYQY------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
P + +L AL+ +IV F V L ++ CSWC YLSC+P S
Sbjct: 420 PVTFFQGRKPLWWGWWLLRAGALIGIIVSFIVLLNNFYKYRTT---CSWCKYLSCLPISN 476
Query: 299 W 299
W
Sbjct: 477 W 477
>gi|297719639|ref|NP_001172181.1| Os01g0147300 [Oryza sativa Japonica Group]
gi|255672873|dbj|BAH90911.1| Os01g0147300 [Oryza sativa Japonica Group]
Length = 121
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/72 (54%), Positives = 51/72 (70%), Gaps = 3/72 (4%)
Query: 199 AVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---AQARVKSRHNPYQYV 255
AVGILPHVDNFAH+GGF +GF LGFVLL+RPQFG+ + P KS++ YQ +
Sbjct: 50 AVGILPHVDNFAHLGGFTSGFFLGFVLLVRPQFGYINQKNSPLGLPMGTTKSKYKTYQII 109
Query: 256 LCIVALVLLIVG 267
L ++A ++LI G
Sbjct: 110 LWVIATLILISG 121
>gi|407927474|gb|EKG20366.1| Peptidase S54 rhomboid [Macrophomina phaseolina MS6]
Length = 557
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 110/272 (40%), Gaps = 70/272 (25%)
Query: 89 NPLFGPSSSTLQKL----GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGI 144
N G S +L L G E + +H +Q +R I I+LH G+IH+ NML V +G
Sbjct: 259 NTTTGASECSLSTLCGMTGIPESNGELHPNQWYRFIVPIFLHGGLIHIGFNMLVQVTVGR 318
Query: 145 RLEQQFGFVRVGFVYLLSG-FG---------------GAYYLLFLFNAVSLLVLL----- 183
+E+ G +R VY +G FG GA +F A++LL LL
Sbjct: 319 DMEKLIGSIRFFLVYFAAGIFGNVLGANYAPNGSPSVGASGAIFGIIALTLLDLLYHWKE 378
Query: 184 ----AAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQL 239
LL +++ + I +G+LP +DNFAHIGGF+ G LG +L PQ
Sbjct: 379 RLNPKRELLFIMLDVVIAFVLGLLPGLDNFAHIGGFIMGLGLGISILHSPQA-------- 430
Query: 240 PAQARVKSRHNPYQYVLCIVALVLL--IVGFTVGLVMLFRGEN----------------- 280
+ R+ PY V L FT + F+G
Sbjct: 431 -LRERIGVDEPPYSAVPNPKQGEGLDNPKAFTKQPIGFFKGRKPLWWAWWLIRAAFIIIV 489
Query: 281 -------------GNDHCSWCHYLSCVPTSKW 299
++ C WC YLSC+P S W
Sbjct: 490 IVAFIVLLNNFYVSHNTCKWCKYLSCIPVSNW 521
>gi|367037003|ref|XP_003648882.1| hypothetical protein THITE_2106847 [Thielavia terrestris NRRL 8126]
gi|346996143|gb|AEO62546.1| hypothetical protein THITE_2106847 [Thielavia terrestris NRRL 8126]
Length = 516
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/244 (30%), Positives = 112/244 (45%), Gaps = 57/244 (23%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R IT I++HAGVIH+ NML + +G +E+ G +R VY+ +G FG
Sbjct: 267 DTQPAPNQWFRFITPIFMHAGVIHIGFNMLLQLTLGRDMEKSIGSIRFFLVYMSAGIFGF 326
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A++LL LL + L +V+ + I+ +G+
Sbjct: 327 VLGGNFAATGIASTGASGALFGIIALTLLDLLYSWRDRVNPVRDLAFIVLDVVISFVLGL 386
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRP---------QFGWAERHQLPAQARVKSR----H 249
LP +DNF+HIGGF+ G LG +L P +A H A + +
Sbjct: 387 LPGLDNFSHIGGFLMGLALGICVLHSPNSLRRRIGDDVPYASSHVSRGSAALGTPPGFLQ 446
Query: 250 NPYQY------------VLCIVALVLLIVGFTVGL--VMLFRGENGNDHCSWCHYLSCVP 295
NP + ++ ALV++ V F + L ++R CSWC YLSC+P
Sbjct: 447 NPVGFFKGRKPLWWAWWLIRAGALVVVTVVFILLLNNFYIYRAT-----CSWCKYLSCLP 501
Query: 296 TSKW 299
S W
Sbjct: 502 VSNW 505
>gi|296416368|ref|XP_002837852.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633736|emb|CAZ82043.1| unnamed protein product [Tuber melanosporum]
Length = 551
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/243 (29%), Positives = 100/243 (41%), Gaps = 55/243 (22%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-----FGG 166
+Q +R IT I+LHAG+IH+ NML + +G +E+ G +R VY +G FGG
Sbjct: 271 EPNQWYRFITPIFLHAGLIHIAFNMLVQLKLGTEMERDIGHLRFAIVYFAAGIFGFVFGG 330
Query: 167 AYYL-----------LFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGILPHV 206
+ LF A+ LL LL L L+V I I +G+LP +
Sbjct: 331 NFAPNGQPSTGCSGSLFGIFALMLLDLLWTWGSRKSPKKDLAFLLVEIIICFVIGLLPGL 390
Query: 207 DNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQLPAQA-RVKSRHNPYQYVLC--- 257
DNF+HIGGF+ G LG +L +R + G E P R NP+ +
Sbjct: 391 DNFSHIGGFLMGLFLGLTVLHSPPSIRQKIGAGEPPYTPMTTNRPPYAANPHSTLPGGFG 450
Query: 258 ---------------------IVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPT 296
+V L V +V++ C WC YLSC+P
Sbjct: 451 GFLKNPAGFFKGRKPLWWAWWLVRAATLATALIVMVVLINNFYKYKKTCGWCKYLSCLPV 510
Query: 297 SKW 299
W
Sbjct: 511 LNW 513
>gi|384495876|gb|EIE86367.1| hypothetical protein RO3G_11078 [Rhizopus delemar RA 99-880]
Length = 396
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/212 (34%), Positives = 109/212 (51%), Gaps = 40/212 (18%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF--------- 164
+Q +RL+ I++HAG+IH L NML+ + +G+ LE+ G R +Y+ SG
Sbjct: 194 NQSFRLVLPIFMHAGIIHFLVNMLTHLRLGVDLEKALGTPRYALLYMASGIWGFVLSAML 253
Query: 165 ----------GGAYYLLFLFNAVSLLV---LLAAA---LLTLVVIIAINLAVGILPHVDN 208
GA + L + + +LV +L L+ L++ I+L +G+LP +DN
Sbjct: 254 SQNLSASTGCSGALFGLIGYMFIDVLVNWKILPHPVRNLMNLLMSTVISLVLGLLPGLDN 313
Query: 209 FAHIGGFMAGFLLG-FVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
FAHIGGF G L+G V +RP A RVK ++L +VALVLLIV
Sbjct: 314 FAHIGGFTVGILMGMLVAPMRPM----------ATPRVKI----ITWILRVVALVLLIVL 359
Query: 268 FTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
F V + L+ + + C C YLSC+P S W
Sbjct: 360 FVVTIRELYSVYDPSTICPNCKYLSCLPVSNW 391
>gi|348509157|ref|XP_003442118.1| PREDICTED: inactive rhomboid protein 1-like [Oreochromis niloticus]
Length = 858
Score = 83.6 bits (205), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 96/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G++R+ +Y+LSG G A +L
Sbjct: 655 QFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 714
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF +L A L+ ++ A G+LP +DNFA
Sbjct: 715 PYRAEVGPAGSQFGILACLFVELFQCWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFA 774
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG R + Y+ I+ +L+ VG
Sbjct: 775 HISGFISGFFLSFAFLPYVSFG---------------RMDMYRKRCQIIIFLLVFVGLFS 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC L+C+P + C
Sbjct: 820 GLVVLFYVYPIK--CEWCELLTCIPFTDKFC 848
>gi|414867423|tpg|DAA45980.1| TPA: hypothetical protein ZEAMMB73_979905 [Zea mays]
Length = 139
Score = 83.2 bits (204), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 63/111 (56%), Gaps = 13/111 (11%)
Query: 5 DLERGKNISNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPK 64
D+E+G +N + G Y + +++W WL+P+ V N+ +F VAMY+NNCP
Sbjct: 7 DVEKGGR-NNGDGKPSPPPPGHLYPQRDGEREWVPWLVPLVVAVNIVLFAVAMYVNNCPA 65
Query: 65 NNWEGGRG----CVAR-FLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRV 110
+ RG CVAR FL R SF+PL ENPL GPSS+T W+R+
Sbjct: 66 HAASSRRGGAGSCVARGFLHRFSFQPLSENPLLGPSSAT-------SWERL 109
>gi|452845449|gb|EME47382.1| hypothetical protein DOTSEDRAFT_166397 [Dothistroma septosporum
NZE10]
Length = 505
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/239 (27%), Positives = 102/239 (42%), Gaps = 55/239 (23%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
D+ Q WR I I+LHAG+IH+ N+L + +G +E Q G +R +Y SG G
Sbjct: 234 DQKPEPDQWWRFIVPIFLHAGIIHIGFNLLLQMTLGRDVELQIGSIRFAILYFASGIFG- 292
Query: 168 YYLLFLFNAVSLLVLLAAA--------------------------LLTLVVIIAINLAVG 201
+ L F A + + LL ++V + I +G
Sbjct: 293 FVLGGNFAATGIASTGCSGSLFGILALTLLDLLYHWRERNSPIKDLLFILVDVIIAFVLG 352
Query: 202 ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQ-------- 253
+LP +DNF+HIGGF+ G +LG LL P Q+P R+ Q
Sbjct: 353 LLPGLDNFSHIGGFLMGLVLGVFLLRSPHAVARRTSQVPPDYTYIPRNEDPQSDGARSFI 412
Query: 254 -----------------YVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
+++ AL+ +++GF + L + ++G CSWC YLSC+P
Sbjct: 413 KSPLGFFKDRRGVWWVWWLVRAAALIAVLIGFILLLKNFYVWKHG---CSWCKYLSCLP 468
>gi|396485661|ref|XP_003842225.1| similar to rhomboid family membrane protein [Leptosphaeria maculans
JN3]
gi|312218801|emb|CBX98746.1| similar to rhomboid family membrane protein [Leptosphaeria maculans
JN3]
Length = 549
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 104/243 (42%), Gaps = 58/243 (23%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
DR +Q WR I I+LHAG+IH+ NML + +G +E++ G +R VY +G
Sbjct: 264 DRSREPNQWWRFIVPIFLHAGLIHIGFNMLLQLTLGRDMEKEIGPLRFTLVYFAAGIFGF 323
Query: 164 -FGGAYYLLFLFNAVSLLVLLA--------------------AALLTLVVIIAINLAVGI 202
GG Y L + + L LL L++ +AI +G+
Sbjct: 324 VLGGNYAADGLASVGASGSLFGILALTLLDLLYNWSTRRSPVKDLLFLLLDVAIAFVLGL 383
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQ------------FGWAERHQL-PAQARVKSR- 248
LP +DNF+HIGGF+ G +LG LL P+ + + L P KS+
Sbjct: 384 LPGLDNFSHIGGFLMGLVLGICLLHSPESLRARTGTDEPPYATVDTQPLAPTATETKSKF 443
Query: 249 -------------HNPYQYVLCIV---ALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLS 292
P + +V LV + +GF + L + N CSWC +L+
Sbjct: 444 AVLTKSPLGFFKGRKPLWWAWWLVRAGGLVAVFIGFILLLRNFYEWRN---TCSWCKHLT 500
Query: 293 CVP 295
C+P
Sbjct: 501 CLP 503
>gi|154276072|ref|XP_001538881.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150413954|gb|EDN09319.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 548
Score = 82.8 bits (203), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/257 (28%), Positives = 109/257 (42%), Gaps = 78/257 (30%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R I I+LHAG+IH+ NM++ + IG +E+ G+ R VY SG FG
Sbjct: 288 DDRPEPNQWFRFIVPIFLHAGLIHIGFNMMAQLTIGADMERAIGWWRYAVVYFASGIFGF 347
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A++ L LL + LL +++ IAI+ +G+
Sbjct: 348 ILGANFAPAGIASTGASGSLFGIFALAFLDLLYSWSSRSNPVKELLIMLITIAISFVLGL 407
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQ--------- 253
LP +DNF+HIGGFM G +LG +L P R ++ + H+PY
Sbjct: 408 LPGLDNFSHIGGFMVGLVLGISVLRSPD---KLRKRI---DSITPHHDPYDPLSASGALG 461
Query: 254 -----------------------------------YVLCIVALVLLIVGFTVGLVMLFRG 278
+V+ LV ++V F + L ++
Sbjct: 462 AGAGAGGAIDNPKTAFMVKQPVKFFQGRKPLWWAWWVIRAGTLVGILVAFILLLNNFYKY 521
Query: 279 ENGNDHCSWCHYLSCVP 295
+ C WC YLSC+P
Sbjct: 522 RS---TCGWCKYLSCLP 535
>gi|325090543|gb|EGC43853.1| rhomboid protein [Ajellomyces capsulatus H88]
Length = 530
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 78/257 (30%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R I I+LHAG+IH+ NM++ + IG +E+ G+ R VY SG FG
Sbjct: 270 DDKPEPNQWFRFIVPIFLHAGLIHIGFNMMAQLTIGADMERTIGWWRYAVVYFASGIFGF 329
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A++ L LL + LL +++ +AI+ +G+
Sbjct: 330 ILGANFAPPGIPSTGASGSLFGIFALTFLDLLYSWSSRSNPVKELLIMLITVAISFVLGL 389
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQ--------- 253
LP +DNF+HIGGFM G +LG +L P R ++ + H+PY
Sbjct: 390 LPGLDNFSHIGGFMVGLVLGISVLRSPD---KLRKRI---DSITPHHDPYDPLSASGALG 443
Query: 254 -----------------------------------YVLCIVALVLLIVGFTVGLVMLFRG 278
+V+ LV ++V F + L ++
Sbjct: 444 AGAGAGDAIDNPKTAFMVKQPVKFFQGRKPLWWAWWVVRAGTLVGILVAFILLLNNFYKY 503
Query: 279 ENGNDHCSWCHYLSCVP 295
+ C WC YLSC+P
Sbjct: 504 RS---TCGWCKYLSCLP 517
>gi|225555969|gb|EEH04259.1| DHHC zinc finger membrane protein [Ajellomyces capsulatus G186AR]
Length = 540
Score = 82.4 bits (202), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 109/257 (42%), Gaps = 78/257 (30%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R I I+LHAG+IH+ NM++ + IG +E+ G+ R VY SG FG
Sbjct: 280 DDKPEPNQWFRFIVPIFLHAGLIHIGFNMMAQLTIGADMERTIGWWRYAVVYFASGIFGF 339
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A++ L LL + LL +++ +AI+ +G+
Sbjct: 340 ILGANFAPPGIPSTGASGSLFGIFALAFLDLLYSWSSRSNPVKELLIMLITVAISFVLGL 399
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQ--------- 253
LP +DNF+HIGGFM G +LG +L P R ++ + H+PY
Sbjct: 400 LPGLDNFSHIGGFMVGLVLGISVLRSPD---KLRRRI---DSITPHHDPYDPLSASGALG 453
Query: 254 -----------------------------------YVLCIVALVLLIVGFTVGLVMLFRG 278
+V+ LV ++V F + L ++
Sbjct: 454 AGAGAGDAIDNPKTAFMVKQPVKFFQGRKPLWWAWWVVRAGTLVGILVAFILLLNNFYKY 513
Query: 279 ENGNDHCSWCHYLSCVP 295
+ C WC YLSC+P
Sbjct: 514 RS---TCGWCKYLSCLP 527
>gi|169615256|ref|XP_001801044.1| hypothetical protein SNOG_10784 [Phaeosphaeria nodorum SN15]
gi|111061058|gb|EAT82178.1| hypothetical protein SNOG_10784 [Phaeosphaeria nodorum SN15]
Length = 521
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 103/242 (42%), Gaps = 52/242 (21%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
DR +Q WR I I+LHAG+IH+ NML + +G +E++ G +R VY +G
Sbjct: 234 DRSHEPNQWWRFIVPIFLHAGIIHIGFNMLLQLTLGRDMEKEIGPLRFALVYFSAGIFGF 293
Query: 164 -FGGAYYLLFLFNAVSLLVLLA--------------------AALLTLVVIIAINLAVGI 202
GG Y L + + L LL L++ IAI +G+
Sbjct: 294 VLGGNYAADGLSSVGASGSLFGILALTLLDLLYTWSTRRSPVKDLLFLLLDIAIAFVLGL 353
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQ------------FGWAERHQL-PAQARVKSR- 248
LP +DNF+HIGGF+ G +LG LL PQ + + L P + K +
Sbjct: 354 LPGLDNFSHIGGFLMGLVLGVCLLHSPQALRERIGVDEPPYATVDTQPLAPTDSESKQQL 413
Query: 249 -------------HNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
P + +V L+ F +++L + CSWC +L+C+P
Sbjct: 414 SRFAKAPIGFFKARKPLWWAWWLVRAGGLVCAFIAFVLLLRNFYEWRNTCSWCKHLTCLP 473
Query: 296 TS 297
+
Sbjct: 474 IT 475
>gi|346327128|gb|EGX96724.1| rhomboid family membrane protein [Cordyceps militaris CM01]
Length = 601
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/237 (30%), Positives = 105/237 (44%), Gaps = 48/237 (20%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D+ Q +R I I++HAG+IH+ N+L + + +EQ G VR VY+ +G FG
Sbjct: 358 DQHPAPDQWYRFIIPIFMHAGIIHIGFNLLLQLTVAKEMEQAIGSVRFFLVYMSAGIFGF 417
Query: 166 --------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGI 202
GA LF A++LL LL L+ +++ + I +G+
Sbjct: 418 VMGGNFAAPGIASTGASGSLFGIIALTLLDLLYSWSERRSPVKDLMFIILDMVIAFVLGL 477
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA--------------QARVKSR 248
LP +DNF+HIGGF+ G LG +L P A R +L A +KS
Sbjct: 478 LPGLDNFSHIGGFLMGLALGICVLHSPN---ALRRRLDEGTTYSAVQGGTGVHPAFLKSP 534
Query: 249 ------HNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
P + IV +LI V +V+L + C WC YLSC+P W
Sbjct: 535 VGFFKGRKPLWWAWWIVRAAVLITIIAVFIVLLNNFYKLGEQCGWCKYLSCLPIKDW 591
>gi|291190666|ref|NP_001167164.1| Rhomboid-like protease 4 [Salmo salar]
gi|223648418|gb|ACN10967.1| Rhomboid-like protease 4 [Salmo salar]
Length = 788
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 41/213 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL ++LHAG++H L ++L + I LE+ G++R+ +Y++SG G
Sbjct: 585 QFYRLWLSLFLHAGILHCLVSVLFQMTILRDLEKLAGWLRISIIYIVSGITGNLASAIFL 644
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + LF + +L A L+ ++ + G+LP +DNFA
Sbjct: 645 PYRAEVGPAGSQFGILACLFVELFQSWQILERPWRAFTKLLCVVLFLFSFGLLPWIDNFA 704
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG R + Y+ + I +L+ +G
Sbjct: 705 HISGFISGLFLSFAFLPYISFG---------------RLDMYRKRVQICVFLLVFLGLFS 749
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
GL +LF C WC YL+C+P + C
Sbjct: 750 GLAVLFYVHPVK--CEWCEYLTCIPLTDKFCDK 780
>gi|326929278|ref|XP_003210794.1| PREDICTED: rhomboid family member 1-like [Meleagris gallopavo]
Length = 769
Score = 82.0 bits (201), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G+ R+ +YLLSG G A +L
Sbjct: 566 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 625
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 626 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 685
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG + + Y+ I+ L+ +
Sbjct: 686 HISGFISGFFLSFAFLPYISFG---------------KFDLYRKRCQIIVFQLIFIALFS 730
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC +L+C+P + C
Sbjct: 731 GLVILFYFYPIK--CEWCEFLTCIPFTDKFC 759
>gi|255728583|ref|XP_002549217.1| hypothetical protein CTRG_03514 [Candida tropicalis MYA-3404]
gi|240133533|gb|EER33089.1| hypothetical protein CTRG_03514 [Candida tropicalis MYA-3404]
Length = 680
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 104/237 (43%), Gaps = 52/237 (21%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
+Q +R+ I+LHAG +H++ N+L V +G +E+ G ++ +Y++SG GG
Sbjct: 328 NQWYRIFIPIFLHAGFLHIIFNLLLQVTMGASIERNIGILKYAIIYIVSGIGGFLLGANF 387
Query: 167 ---------AYYLLFLFNAVSLLVLL---------------AAALLTLVVIIAINLAVGI 202
A LF A ++++ + A + ++ I I +G+
Sbjct: 388 TPQGIASTGASGALFGIVATNIILFIYTGRKNTNMYGTKHYALFICIMIAEIVITFVLGL 447
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRP-------------------QFGWAERHQLPAQA 243
LP +DNF+H+GGF G L +LL P QF +
Sbjct: 448 LPGLDNFSHLGGFAMGILTSILLLKDPFWVFKDGIITYPKNPSTWQQFKNNWNPLFAIED 507
Query: 244 RVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGE-NGNDHCSWCHYLSCVPTSKW 299
++K+R + +V I AL L+IV + + F N + CSWC Y +C+P W
Sbjct: 508 KIKNRFIIWCHVR-IAALSLIIVYYALLCKNFFNANLNQGNRCSWCRYFNCIPVKGW 563
>gi|118098129|ref|XP_414944.2| PREDICTED: inactive rhomboid protein 1 [Gallus gallus]
Length = 853
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G+ R+ +YLLSG G A +L
Sbjct: 650 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 709
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 710 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 769
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG + + Y+ I+ L+ +
Sbjct: 770 HISGFISGFFLSFAFLPYISFG---------------KFDLYRKRCQIIVFQLIFIALFS 814
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC +L+C+P + C
Sbjct: 815 GLVILFYFYPIK--CEWCEFLTCIPFTDKFC 843
>gi|296816012|ref|XP_002848343.1| DHHC zinc finger membrane protein [Arthroderma otae CBS 113480]
gi|238841368|gb|EEQ31030.1| DHHC zinc finger membrane protein [Arthroderma otae CBS 113480]
Length = 488
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 109/241 (45%), Gaps = 53/241 (21%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R I ++LHAG++H+ N+ + + IG +E+ G+ R VY SG FG
Sbjct: 241 DDKPEPNQWFRFILPMFLHAGLVHIGFNLFAQLSIGADMERAIGWWRYAIVYFSSGIFGF 300
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A+ +L L L+ +++ +AI+ +G+
Sbjct: 301 VLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLMFMLITVAISFVLGL 360
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER--HQLP----------AQARVKSRHN 250
LP +DNF+HIGGF+ G +LG +L P ER ++P + + K
Sbjct: 361 LPGLDNFSHIGGFLTGLVLGICVLRSPD-TLRERIGVKIPYVSMGGNLGVDENQKKFYKQ 419
Query: 251 PYQY------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
P + +L AL+ +I F V L ++ CSWC YLSC+P S
Sbjct: 420 PVNFFQGRKPLWWAWWLLRAGALIGIISSFIVLLNNFYKYRTT---CSWCKYLSCLPVSN 476
Query: 299 W 299
W
Sbjct: 477 W 477
>gi|224069971|ref|XP_002196233.1| PREDICTED: inactive rhomboid protein 1 [Taeniopygia guttata]
Length = 857
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G+ R+ +YLLSG G A +L
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 713
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 714 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 773
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG + + Y+ I+ L+ +
Sbjct: 774 HISGFISGFFLSFAFLPYISFG---------------KFDLYRKRCQIIVFQLIFIALFS 818
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC +L+C+P + C
Sbjct: 819 GLVILFYFYPIK--CEWCEFLTCIPFTDKFC 847
>gi|123479365|ref|XP_001322841.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121905694|gb|EAY10618.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 377
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 102/233 (43%), Gaps = 40/233 (17%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIR 145
+ ENP+FGPS L +GA + V+ WR T ++LH+G IHL+ ++ +F R
Sbjct: 133 MSENPMFGPSQEVLLLMGAKQ-ASVILAGSWWRFFTSMFLHSGAIHLVIILIFAIFTS-R 190
Query: 146 LEQQFGFVRVGFVYLLSGFGGAYYLLFL-------------FNAVSLLV--LLAA----- 185
+E+ GF R FV+L+SG G L F + LL L A
Sbjct: 191 VERDTGFWRAFFVFLVSGMYGTILSCLLVPELISCGASGAIFGYIGLLFADLFAGWRSNP 250
Query: 186 ----ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA 241
L LV + + + +G+ P +DNF +IGGF+ G L +LL FG ER
Sbjct: 251 KKGRDLGILVGLTVVGIILGLTPFIDNFNNIGGFIMGLLFALMLLPNLSFGSCERM---- 306
Query: 242 QARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCV 294
+ +A + F V LV +R + C +C ++C+
Sbjct: 307 ----------CHGFISFLAFPAMTFIFCVCLVGFYRSIDNVKWCPFCQRITCL 349
>gi|326430116|gb|EGD75686.1| hypothetical protein PTSG_07804 [Salpingoeca sp. ATCC 50818]
Length = 855
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 66/214 (30%), Positives = 100/214 (46%), Gaps = 42/214 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLF 174
Q +R I+LHAG IHL +L + +E+ G+ RV F+Y++SG GG + + LF
Sbjct: 645 QWYRFFLAIFLHAGGIHLFVVLLLQFSLLPDVERIAGWWRVAFIYMISGAGG-FVISGLF 703
Query: 175 NAVSLLV--------LLAA-----------------ALLTLVVIIAINLAVGILPHVDNF 209
+ + V +LAA L L+VII + A+GILP+VDN+
Sbjct: 704 SRYQVTVGASGANFGILAALVVELVQSWKFIERPGSELAKLIVIIVLAFAIGILPYVDNY 763
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
+HIGGF+ G L L FG +R +++L I+AL ++ F
Sbjct: 764 SHIGGFLFGMLAALAFLPHITFG--------------TRDKAKKHLLSILALGGIVAAFV 809
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
V + + CS+C YL+CV + C N
Sbjct: 810 VLFTIFYAATIPG--CSFCGYLNCVDLLQDFCAN 841
>gi|322693699|gb|EFY85550.1| Rhomboid family protein [Metarhizium acridum CQMa 102]
Length = 500
Score = 81.6 bits (200), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 75/238 (31%), Positives = 109/238 (45%), Gaps = 51/238 (21%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
++ +Q +R I I+LHAG+IH+ NML + + +EQ G VR VYL +G FG
Sbjct: 266 NQSPQPNQWFRFIVPIFLHAGLIHIGFNMLLQMTLAKEMEQAIGSVRFFLVYLSAGIFGF 325
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A++LL L + L+ +++ I I+ +G+
Sbjct: 326 VMGGNFAAPGIASTGASGSLFGVIALTLLDLFYSWTERRNPVKDLMFIILDIVISFVLGL 385
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP-----------------AQARV 245
LP +DNF+HIGGF+ G LG LL P A R ++ A +
Sbjct: 386 LPGLDNFSHIGGFLMGLALGVCLLHSPN---ALRRKIDGSDSTSYSAVNTSGDDTAPGFL 442
Query: 246 KSR------HNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
KS P + +V LI V +V+L NG+ CSWC YLSC+ T+
Sbjct: 443 KSPIGFFKGRKPLWWAWWLVRAGFLIAVIIVFIVLLNNFYNGSHSCSWCKYLSCLTTA 500
>gi|395515582|ref|XP_003761980.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1
[Sarcophilus harrisii]
Length = 858
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G+ R+ +YLLSG G A +L
Sbjct: 655 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 714
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 715 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 774
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG + + Y+ I+ ++ +G
Sbjct: 775 HISGFISGFFLSFAFLPYISFG---------------KFDLYRKRCQIIVFQIIFLGLLS 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC +L+C+P + C
Sbjct: 820 GLVILFYFXPIR--CEWCEFLTCIPFTDKFC 848
>gi|345312945|ref|XP_003429322.1| PREDICTED: inactive rhomboid protein 1-like, partial
[Ornithorhynchus anatinus]
Length = 599
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 94/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G
Sbjct: 396 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRISIIYLLSGVTGNLASAIFL 455
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + LF + +L A L+ ++ G+LP +DNFA
Sbjct: 456 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 515
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG R + Y+ I+ L+ +G
Sbjct: 516 HISGFISGFFLSFAFLPYISFG---------------RFDLYRKRCQIIVFQLVFLGLLA 560
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C+WC +L+C+P + C
Sbjct: 561 GLVILFYFYPIR--CAWCEFLTCLPFTDKFC 589
>gi|270012402|gb|EFA08850.1| hypothetical protein TcasGA2_TC006551 [Tribolium castaneum]
Length = 1455
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 40/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL T ++LHAGV+ L +L F+ LE+ G +R+G +Y+ SG G
Sbjct: 1247 QFYRLWTSLFLHAGVLQLAVTVLIQYFLMRDLEKLTGSLRIGIIYIGSGVAGNLASAIFV 1306
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A ++ + N+ +L AL L+ I + +G+LP VDN+A
Sbjct: 1307 PYRADVGPAGSQFGLLACLIVEVLNSWPMLKHPNQALCKLLSITLVLFLIGLLPWVDNYA 1366
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ GF+ GFLL + LL FG ER + + VL V LV V F +
Sbjct: 1367 HLFGFVFGFLLSYALLPFISFGVYERRK--------------KIVLIWVCLVSAGVLF-I 1411
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
LV+LF D C C Y +C+P ++ C +
Sbjct: 1412 CLVLLFYIIPVYD-CKICSYFNCIPFTRDFCAS 1443
>gi|91089053|ref|XP_970266.1| PREDICTED: similar to rhomboid [Tribolium castaneum]
Length = 1486
Score = 81.3 bits (199), Expect = 5e-13, Method: Composition-based stats.
Identities = 66/213 (30%), Positives = 99/213 (46%), Gaps = 40/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL T ++LHAGV+ L +L F+ LE+ G +R+G +Y+ SG G
Sbjct: 1278 QFYRLWTSLFLHAGVLQLAVTVLIQYFLMRDLEKLTGSLRIGIIYIGSGVAGNLASAIFV 1337
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A ++ + N+ +L AL L+ I + +G+LP VDN+A
Sbjct: 1338 PYRADVGPAGSQFGLLACLIVEVLNSWPMLKHPNQALCKLLSITLVLFLIGLLPWVDNYA 1397
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ GF+ GFLL + LL FG ER + + VL V LV V F +
Sbjct: 1398 HLFGFVFGFLLSYALLPFISFGVYERRK--------------KIVLIWVCLVSAGVLF-I 1442
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
LV+LF D C C Y +C+P ++ C +
Sbjct: 1443 CLVLLFYIIPVYD-CKICSYFNCIPFTRDFCAS 1474
>gi|449302177|gb|EMC98186.1| hypothetical protein BAUCODRAFT_121073 [Baudoinia compniacensis
UAMH 10762]
Length = 520
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 69/238 (28%), Positives = 108/238 (45%), Gaps = 58/238 (24%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------- 165
+Q WR I I+LHAG+IH+ N+L + +G +E+ G +R VY +G FG
Sbjct: 246 NQWWRFIVPIFLHAGIIHIAFNLLLQLTLGADVEKLIGSIRFTIVYFAAGIFGFVLGGNF 305
Query: 166 --------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGILPHVDN 208
G LF A++LL LL LL +++ + I +G+LP +DN
Sbjct: 306 AANGIASCGCSGSLFGILAITLLDLLYTWHQREGPIKDLLFILIDVIIAFVLGLLPGLDN 365
Query: 209 FAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP---------AQARVKSRHNPYQ------ 253
F+HIGGF+ G +LG V +LR ++ R A+ R + Q
Sbjct: 366 FSHIGGFLMGLVLG-VCILRSPTTFSRRTSQDVGRYSGLSNARQSTSGREDGLQSFFRNP 424
Query: 254 --------------YVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
+++ ALV ++GF + L ++ G C+WC YLSC+P +
Sbjct: 425 IAFFQNRRGIWWVWWLVRAAALVGCLIGFVLLLKNFYQWRTG---CTWCKYLSCLPVT 479
>gi|357580551|sp|C8VCL5.1|Y0929_EMENI RecName: Full=Uncharacterized rhomboid protein AN10929
gi|259483309|tpe|CBF78591.1| TPA: rhomboid family membrane protein (AFU_orthologue;
AFUA_2G16490) [Aspergillus nidulans FGSC A4]
Length = 503
Score = 81.3 bits (199), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 68/254 (26%), Positives = 113/254 (44%), Gaps = 64/254 (25%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D Q +R I ++LH+G +H+ N+L + +G +E+ G+ R G VYL SG
Sbjct: 243 DDKPAPDQWFRFIIPMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSSGIWGF 302
Query: 164 -FGGAYY-----------LLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GG Y LF A+ +L LL L+ +V+ IA++ +G+
Sbjct: 303 VLGGNYAGQGEASCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVSFVLGL 362
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQF-----------------GWAERHQLPAQARV 245
LP +DNF+H+GGF G LG ++ P G A + P Q +
Sbjct: 363 LPGLDNFSHLGGFTMGLALGLCVMRSPNALRERIGLARSPYVAMSGGVAAENADPDQNKT 422
Query: 246 KS--------RHNPYQY------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHC 285
+ + NP + ++ + ALV +++GF + +V ++ + N C
Sbjct: 423 STGSNIGGLGKFNPKGFFAGRKPLWWAWWLVRLGALVAVLIGFILLIVNFYKYPSSN--C 480
Query: 286 SWCHYLSCVPTSKW 299
SWC+ SC+P + W
Sbjct: 481 SWCYRFSCLPVNGW 494
>gi|301623881|ref|XP_002941242.1| PREDICTED: rhomboid family member 1-like [Xenopus (Silurana)
tropicalis]
Length = 855
Score = 80.9 bits (198), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L ++ + I LE+ G+ R+ +Y+LSG G A +L
Sbjct: 652 QVYRLWLSLFLHAGVLHCLVSVCFQMTILRDLEKLAGWHRISIIYILSGITGNLTSAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLFAVVIFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H GF++GF L F L FG + + Y+ I+ +L+ G
Sbjct: 772 HFAGFVSGFFLSFAFLPYISFG---------------KFDMYRKRCQIIIFLLIFFGLFS 816
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC YL+C+P + C
Sbjct: 817 GLVVLFYVYPIK--CEWCEYLTCIPFTDKFC 845
>gi|326672347|ref|XP_691851.4| PREDICTED: rhomboid family member 1-like [Danio rerio]
Length = 909
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL ++LHAG++H L ++ + I LE+ G++R+ +Y+LSG G
Sbjct: 706 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 765
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + LF + +L A L ++ A G+LP +DNFA
Sbjct: 766 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFTKLSCVVLFLFAFGLLPWIDNFA 825
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG R + Y+ L I+ + L VG
Sbjct: 826 HICGFVSGFFLSFAFLPYISFG---------------RMDMYRKRLQILVALTLFVGIFS 870
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
V+LF C WC +L+C+P + C
Sbjct: 871 SFVVLFYVYPVK--CEWCEFLTCIPLTDKFC 899
>gi|327352454|gb|EGE81311.1| rhomboid family membrane protein [Ajellomyces dermatitidis ATCC
18188]
Length = 548
Score = 80.5 bits (197), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 113/252 (44%), Gaps = 58/252 (23%)
Query: 100 QKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVY 159
+ G+LE D+ +Q +R I I+LH+G+IH+ NM++ + IG +E+ G+ R VY
Sbjct: 286 KPQGSLE-DKP-EPNQWFRFIVPIFLHSGLIHIGFNMMAQLTIGADMERTIGWWRYALVY 343
Query: 160 LLSG-FG---------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVII 194
SG FG GA LF A++ L LL L+ +++ I
Sbjct: 344 FASGIFGFILGANFAPAGIASTGASGCLFGILALAFLDLLYTWGTRPKPVTELVVMLITI 403
Query: 195 AINLAVGILPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQLP--------- 240
I+ +G+LP +DNF+HIGGF+ G +LG +L LR + G H P
Sbjct: 404 GISFVLGLLPGLDNFSHIGGFLVGLVLGISVLRSPDRLRERIGAVTPHLDPYDPVSASGA 463
Query: 241 ----AQARVKSRH----NPYQYV--------LCIVALVLLIVGFTVGLVMLFRG-ENGND 283
+A K++ P ++ L V +VG + ++L
Sbjct: 464 LGAGDEAGDKAKRFMVKQPVKFFQGRKPLWWLWWVVRAGTLVGIVIAFILLLDNFYKYRS 523
Query: 284 HCSWCHYLSCVP 295
C WC YLSC+P
Sbjct: 524 TCGWCRYLSCLP 535
>gi|336377068|gb|EGO05403.1| hypothetical protein SERLA73DRAFT_174545 [Serpula lacrymans var.
lacrymans S7.3]
gi|336390111|gb|EGO31254.1| hypothetical protein SERLADRAFT_456141 [Serpula lacrymans var.
lacrymans S7.9]
Length = 419
Score = 80.5 bits (197), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 86/318 (27%), Positives = 135/318 (42%), Gaps = 88/318 (27%)
Query: 45 FVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGA 104
FVV + + +V ++IN N+ G +S +P+ NP+ GPS S L LGA
Sbjct: 108 FVVWALTIAMVGVFINELVVNSRAQGT--------PVSLKPVV-NPMLGPSESALINLGA 158
Query: 105 -----LEWDRVVHE----------------------------------HQGWRLITCIWL 125
++ + V E +Q +R IT I+L
Sbjct: 159 RFPPCMKIVQGVPETMQMACLNDTANPPNQLCSLEDICGFGGFHNQTPNQWFRFITAIFL 218
Query: 126 HAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG---------------GAYY 169
HAG IH++ NM++ + + ++E++ G Y +G FG GA
Sbjct: 219 HAGFIHIILNMIAQLTVSAQIEREMGSAGFLITYFAAGIFGNVLGGNFSLVGAPSIGASG 278
Query: 170 LLFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFL 220
+F AV+ + L A L+ + + + + +A+G +P+VDNFAH+GG G L
Sbjct: 279 AIFGTVAVTWVDLFAHWKYQYRPVRKLVFMTIELILGIALGYIPYVDNFAHLGGLCMGLL 338
Query: 221 LGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGEN 280
+G L P +RH+L + + A+ L IV F V L+ F +
Sbjct: 339 VGTTLY--PVISPTKRHKL------------VMWGFRLAAIPLAIVLFVV-LIRNFYTSD 383
Query: 281 GNDHCSWCHYLSCVPTSK 298
CS C YLSC+PTS
Sbjct: 384 PYAACSGCRYLSCIPTSS 401
>gi|226289269|gb|EEH44781.1| DHHC zinc finger membrane protein [Paracoccidioides brasiliensis
Pb18]
Length = 519
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 71/270 (26%), Positives = 105/270 (38%), Gaps = 83/270 (30%)
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
P P+ S QK +W +R I ++LHAG++H+ NM++ + IG +E+
Sbjct: 256 PDPKPNGSIKQKPEPNQW---------FRFIVPMFLHAGLVHIGFNMMAQLTIGADMERT 306
Query: 150 FGFVRVGFVYLLSGFGG-------------------------AYYLLFLFNAVSLLVLLA 184
G+ R VY SG G A L LF
Sbjct: 307 IGWWRYAIVYFASGIFGFILGANFAASGIASTGASGCLSGILALACLDLFYTWGSRPKPV 366
Query: 185 AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
L+ +++ IAI+ +G+LP +DNF+HIGGF+ G +LG LL P R
Sbjct: 367 TELIIMLITIAISFVLGLLPGLDNFSHIGGFLVGLVLGISLLRSPD----------RLRR 416
Query: 245 VKSRHNPYQYVLCIVALV----------------------------------LLIVGFTV 270
+ + +PY+ V+ ALV L+ G V
Sbjct: 417 IGASGDPYEPVVASGALVEDGVESKKKMKNKFMATKPVKFFTGRKPLWWVWWLVRAGTLV 476
Query: 271 GLVMLF-----RGENGNDHCSWCHYLSCVP 295
G+V+ F C WC YLSC+P
Sbjct: 477 GIVIAFILLLNNFYKYRSKCGWCKYLSCLP 506
>gi|378726481|gb|EHY52940.1| hypothetical protein HMPREF1120_01142 [Exophiala dermatitidis
NIH/UT8656]
Length = 524
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/251 (24%), Positives = 102/251 (40%), Gaps = 63/251 (25%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG----- 165
H +Q +R I ++LHAG++H+ N++ + + +E+ G +R VY SG FG
Sbjct: 233 HPNQWFRFIVPMFLHAGLVHIAFNLMLQLTMAREMEKAIGSIRFALVYFSSGIFGFVLGG 292
Query: 166 ----------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGILPHV 206
GA LF A++LL L+ L+ ++V + I+ +G+LP +
Sbjct: 293 NFAASAIASTGASGCLFGVLALTLLDLIYGWNERRSPVRELMWILVDVLISFVLGLLPGL 352
Query: 207 DNFAHIGGFMAGFLLGFVLLLRP--------QFGWAERHQLPAQARVKSRHNPYQYVLCI 258
DNF+HIGGF+ G +G +L P + A + ++ + + NP
Sbjct: 353 DNFSHIGGFLMGLAMGICILHSPNILRKRNGEVSAAPYRNVGSEPDISNPKNPMLAASTP 412
Query: 259 VALVLLIVGFTVGLVMLFRGENG------------------------------NDHCSWC 288
+ FT + F+ +D CSWC
Sbjct: 413 TTAPADVSAFTKHPLGFFKARKPLWWAWWLFRAGALIGVLVAFVVLLNNFYKYHDTCSWC 472
Query: 289 HYLSCVPTSKW 299
YLSC+P W
Sbjct: 473 KYLSCLPIKNW 483
>gi|121716844|ref|XP_001275927.1| DHHC zinc finger membrane protein [Aspergillus clavatus NRRL 1]
gi|119404084|gb|EAW14501.1| DHHC zinc finger membrane protein [Aspergillus clavatus NRRL 1]
Length = 526
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 72/264 (27%), Positives = 116/264 (43%), Gaps = 75/264 (28%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
DR + +Q +R I ++LH G+IH+ N+L + +G +E+ G+ R FVYL SG
Sbjct: 245 DRPM-PNQWFRFIIPMFLHTGIIHIGFNLLVQMTMGADMERTVGWWRYAFVYLASGIWGF 303
Query: 164 -FGGAYYL-----------LFLFNAVSLLVLL------AAALLTLVVI---IAINLAVGI 202
GG Y LF A+ +L LL A+ L L+++ I I+ +G+
Sbjct: 304 VLGGNYAAQGESSCGCSGSLFGILALYILDLLYTWNERASPLTELIIMVIGIGISFVLGL 363
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQ----------------FGWAERHQLPAQARV- 245
LP +DNF+HIGGF+ G G ++ P G A P +++
Sbjct: 364 LPGLDNFSHIGGFVMGLASGLCIMRSPNALRERIGLARNPYVAMTGGAGASTEPENSKIA 423
Query: 246 ----------KSRHNPYQ--------------------YVLCIVALVLLIVGFTVGLVML 275
K R P +++ + ALV +++GF + +V
Sbjct: 424 DPGSSITDFFKGRKGPKSAEVTGPLSFFKGRKPLWWAWWLVRLGALVAVLIGFILLIVDF 483
Query: 276 FRGENGNDHCSWCHYLSCVPTSKW 299
++ N CSWC+ LSC+P + W
Sbjct: 484 YKYYTSN--CSWCYRLSCLPVNDW 505
>gi|198415237|ref|XP_002121328.1| PREDICTED: similar to C16ORF8, partial [Ciona intestinalis]
Length = 397
Score = 80.1 bits (196), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 96/213 (45%), Gaps = 40/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG----FGGAYYL 170
Q +RL + LHAG++H L +++ + + +E+ G++R+G +Y+ SG F A +L
Sbjct: 192 QIYRLWLPVMLHAGILHCLVSVVFQMTVLRDMEKLAGWLRIGIIYIFSGITGNFASAIFL 251
Query: 171 LF----------------LFNAV----SLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF V LL AL LV I + G LP +DNFA
Sbjct: 252 PYRAEVGPAGSHFGILACLFVEVLQSWQLLKSPLRALFKLVAITTVLFVFGALPWIDNFA 311
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL FVLL F +RH+ Q +V L +G
Sbjct: 312 HIFGFISGLLLSFVLLPYITFNRFDRHRKRIQ---------------VVTCSALFIGLLT 356
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L + D CS C Y++C+P ++ C N
Sbjct: 357 ALFFFYYIHPITD-CSVCRYINCIPFNEDFCSN 388
>gi|344302219|gb|EGW32524.1| hypothetical protein SPAPADRAFT_61590 [Spathaspora passalidarum
NRRL Y-27907]
Length = 555
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 100/235 (42%), Gaps = 50/235 (21%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +R+ I+LHAG +H++ N+L V +G +E+ G ++ +Y+ SG G
Sbjct: 206 QWYRIFIPIFLHAGFLHIIFNLLLQVTMGGSIERNIGILKYAIIYIASGIAGFLLGANFT 265
Query: 167 ------------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAI-----NLAVGIL 203
+LF++ + TL + I I + +G+L
Sbjct: 266 PVGIASTGASGALFGIVATNMILFVYTGKKNTNMYGTKHYTLFIFIMIGEIVVSFVLGLL 325
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE----------------RHQLPAQA-RVK 246
P +DNF+HIGGF G L+ V L P + + + H P A K
Sbjct: 326 PGLDNFSHIGGFAMGILMAIVFLKDPYWVYVDGIIVYRKGRDTLQQFIDHWNPMYAIEDK 385
Query: 247 SRHNPYQYVLC-IVALVLLIVGFTVGLVMLFR-GENGNDHCSWCHYLSCVPTSKW 299
R Y ++ +VA L IV F V + F+ G + D C WC Y++C+P W
Sbjct: 386 IRTRFYIWIGARVVAFALAIVYFAVLIKNFFKSGIDRGDTCHWCKYINCIPVHGW 440
>gi|432952307|ref|XP_004085050.1| PREDICTED: inactive rhomboid protein 1-like, partial [Oryzias
latipes]
Length = 627
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 91/208 (43%), Gaps = 41/208 (19%)
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----------- 166
RL ++LHAG++H L +M + + LE+ G++R+ +Y+LSG G
Sbjct: 424 RLWLALFLHAGILHCLVSMFFQMTVLRDLEKLAGWLRISIIYMLSGITGNLASAIFLPYR 483
Query: 167 -------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIG 213
A + LF + +L A L+ I + G+LP +DNFAHI
Sbjct: 484 AEVGPAGSQFGILACLFVELFQSWQILERPWRAFAKLLAISVFFFSFGLLPWIDNFAHIC 543
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
GF++GF L F L FG H + RV+ I +L+ VG L
Sbjct: 544 GFVSGFFLSFAFLPYISFG----HSDAFRKRVQ-----------ICVFLLIFVGLFSTLA 588
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+LF C WC YL+C+P + C
Sbjct: 589 VLFYIYPIK--CDWCEYLTCIPITDKLC 614
>gi|440634935|gb|ELR04854.1| hypothetical protein GMDG_07079 [Geomyces destructans 20631-21]
Length = 515
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/231 (31%), Positives = 100/231 (43%), Gaps = 45/231 (19%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------- 165
+Q +R IT ++LHAG+IH+ N+L V IG +EQ G +R +YL SG FG
Sbjct: 257 NQWFRFITPMFLHAGLIHIGFNLLLQVTIGREMEQSIGHIRFALMYLSSGIFGFVLGGNF 316
Query: 166 --------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGILPHVDN 208
GA LF A+ LL LL L + + I I+ +G+LP +DN
Sbjct: 317 AASGISSTGASGSLFGIIALMLLELLYTWSERPNPWRDLAFVCLDIVISFVLGLLPGLDN 376
Query: 209 FAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVL----- 263
F+HIGGF+ G +G +L P + P V R V V L
Sbjct: 377 FSHIGGFLMGLAIGICILHSPTSLTRKVGAEPPYETVGKRGTGPSEVSRFVKAPLGFFKA 436
Query: 264 ---------LIVGFTVGLVMLFRGENGND------HCSWCHYLSCVPTSKW 299
LI + L+++ N+ CSWC YLSC+P W
Sbjct: 437 RKPLWWVWWLIRAAALILILVLFIVLLNNFYKYQKECSWCKYLSCLPVKDW 487
>gi|50345116|ref|NP_001002228.1| inactive rhomboid protein 1 [Danio rerio]
gi|82184057|sp|Q6GMF8.1|RHDF1_DANRE RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|49257555|gb|AAH74097.1| Zgc:91984 [Danio rerio]
Length = 857
Score = 79.7 bits (195), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 96/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G++R+ +Y+LSG G A +L
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWLRISIIYILSGITGNLASAIFL 713
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ L + +L A L+ ++ A G+LP +DNFA
Sbjct: 714 PYRAEVGPAGSQFGILACLFVELIQSWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFA 773
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG R + Y+ I+ +++ +G
Sbjct: 774 HISGFISGFFLSFAFLPYISFG---------------RLDMYRKRCQIIIFLVVFLGLFA 818
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC L+C+P + C
Sbjct: 819 GLVVLFYVHPIK--CEWCELLTCIPFTDKFC 847
>gi|326435850|gb|EGD81420.1| hypothetical protein PTSG_02140 [Salpingoeca sp. ATCC 50818]
Length = 1498
Score = 79.7 bits (195), Expect = 2e-12, Method: Composition-based stats.
Identities = 62/204 (30%), Positives = 94/204 (46%), Gaps = 43/204 (21%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL ++LH G +HL +L + +E+ G++R+ F+Y+L+G GG
Sbjct: 1297 QWYRLYLAMFLHVGFVHLFFVVLMQHSFAVEIEKLAGWLRMFFIYMLAGIGGYLVSANFT 1356
Query: 167 ----------AYYLLF------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A Y L LF + LL L L +I + LAVG+LP++DN++
Sbjct: 1357 PYQVSTGASPALYGLLGCLFVELFQSWQLLESPKKEFLKLFLIAIVALAVGLLPYIDNWS 1416
Query: 211 HIGGFMAGFLLGFVLLLRPQFG-WAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
H+GGF G L V L FG W AR ++ L ++AL L+ T
Sbjct: 1417 HLGGFAFGILSSIVFLPYITFGKW-------DAARKRT--------LILIALPGLVALIT 1461
Query: 270 VGLVMLFRGENGNDHCSWCHYLSC 293
V ++L +CSWC L+C
Sbjct: 1462 VLSILL---ATRTINCSWCGLLNC 1482
>gi|342321566|gb|EGU13499.1| Hypothetical Protein RTG_00227 [Rhodotorula glutinis ATCC 204091]
Length = 690
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 100/211 (47%), Gaps = 44/211 (20%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------- 165
+Q +R I+LHAGV+HLL NML+ ++E+ G R VYL +G FG
Sbjct: 462 NQSFRFFVPIFLHAGVVHLLLNMLAQCTSSAQVERMMGTPRFLIVYLAAGIFGFVLGANF 521
Query: 166 --------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHVDN 208
GA +F +A L+ LLA LL LVV I I L +G +P VDN
Sbjct: 522 ALVGQPSVGASGAIFGTHAALLVDLLAHWKIEYRPLRKLLFLVVEIIIGLGLGWVPGVDN 581
Query: 209 FAHIGGFMAGFLLGFVL--LLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIV 266
FAH+GGF+ G L +L ++ P SR + Y ++ + + L+V
Sbjct: 582 FAHLGGFLMGLLTSVLLFPIVHP-----------------SRTHKYIFIGLRLLALPLVV 624
Query: 267 GFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
V LV F + CSWC YLSC PT+
Sbjct: 625 VVFVVLVRNFYTGDPATACSWCRYLSCWPTA 655
>gi|406607246|emb|CCH41381.1| Rhomboid family member 1 [Wickerhamomyces ciferrii]
Length = 476
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 74/229 (32%), Positives = 113/229 (49%), Gaps = 47/229 (20%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLL 171
+Q WRLI+ ++LHAG +H+L N+L +G+ +E+Q G +R +YL+SG G +
Sbjct: 230 EPNQIWRLISAMFLHAGFVHILFNLLLQCTMGLDVEKQIGTLRYMIIYLVSGISGN---V 286
Query: 172 FLFNAVSLLVLLAAALLTLVVIIAINLAVGIL---------------------------- 203
N + + A L IIA+NL + +L
Sbjct: 287 LGVNFAQDGISSSGASGALFGIIAVNLLIFVLHRDRSTVRYYGFMISILVLEVVVCLVLG 346
Query: 204 --PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR-----VKSRHNPYQ--- 253
P +DNF HIGGF+ G LLG ++L P+F +RH + + K N +
Sbjct: 347 LLPGLDNFCHIGGFVGGLLLGLLMLNDPKFIRLKRHTRGLRLQGFGSFSKHMQNIRKDRF 406
Query: 254 ---YVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
++ IVALVL+I F VGL++ F+ NG +CSWC Y +C+P + W
Sbjct: 407 IIWIIVRIVALVLIIAWF-VGLILNFK--NGGGNCSWCKYFNCLPVNNW 452
>gi|348502086|ref|XP_003438600.1| PREDICTED: inactive rhomboid protein 1-like [Oreochromis niloticus]
Length = 865
Score = 79.3 bits (194), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 94/208 (45%), Gaps = 41/208 (19%)
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYLLF- 172
RL ++LHAG++H L ++L + + +E+ G++R+ +Y+LSG G A +L +
Sbjct: 665 RLWLSLFLHAGILHCLVSVLFQMTVLRDIEKLAGWLRISIIYMLSGITGNLASAIFLPYR 724
Query: 173 -------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIG 213
LF + +L A L+ I + G+LP +DNFAHI
Sbjct: 725 AEVGPAGSQFGILACLFVELFQSWQILERPWRAFAKLLAISVFFFSFGLLPWIDNFAHIC 784
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
GF++GF L F L FG R + Y+ + I +L+ +G L
Sbjct: 785 GFVSGFFLSFAFLPYISFG---------------RSDMYRKRVQICVFLLIFLGLFSALA 829
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+LF C WC YL+C+P + C
Sbjct: 830 VLFYIYPVK--CDWCEYLTCIPITDKFC 855
>gi|156404290|ref|XP_001640340.1| predicted protein [Nematostella vectensis]
gi|156227474|gb|EDO48277.1| predicted protein [Nematostella vectensis]
Length = 500
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 97/206 (47%), Gaps = 40/206 (19%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
Q +RL I+LHAG+IHLL ++ I LE+ G++R+ +Y+ SG GG
Sbjct: 291 DQIYRLWMAIFLHAGIIHLLCTLVFNFTILRDLERMAGWIRISIIYIFSGIGGYLISAIL 350
Query: 167 -----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNF 209
A + L + ++ ALL L ++ + L VG+LP+VDNF
Sbjct: 351 IPYQVEVGPSGSMFGIIACLFVELIQSWQMVAQPILALLKLCGVVFLLLVVGLLPYVDNF 410
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
AH+ GF GF L F+ L FG +R++ Q +VA ++I+ +T
Sbjct: 411 AHMAGFCFGFCLAFIFLPYVTFGRFDRNRKRVQI--------------LVAFAVVIIMYT 456
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVP 295
VG ++ E C C YL+C+P
Sbjct: 457 VGFIIFL--EVQTTTCYGCTYLNCIP 480
>gi|358389732|gb|EHK27324.1| hypothetical protein TRIVIDRAFT_34861 [Trichoderma virens Gv29-8]
Length = 510
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 94/379 (24%), Positives = 142/379 (37%), Gaps = 142/379 (37%)
Query: 32 GSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPL----K 87
G++++ WL+ +F VA VAVFI + N G L+ P+ +
Sbjct: 154 GANKKRIPWLVYIFSVAQVAVFIAEIVRN------------------GLLTGSPIMIKPQ 195
Query: 88 ENPLFGPSSSTLQKLGALEWDRVVH----------------------------------- 112
NP+ GPS+ L +GA + +H
Sbjct: 196 FNPMIGPSTQVLINMGA-RYVPCMHNIKEIQGSTIPVLFLCPNATKNTQFCPLSELCGFG 254
Query: 113 -----------EHQG------WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRV 155
EHQ +R I I++HAG+IH+ N+L + IG +E G +R
Sbjct: 255 GDVPNPLFDGNEHQSPAPNQWFRFIIPIFMHAGLIHIGFNLLMQLTIGKEMEMAIGSIRF 314
Query: 156 GFVYLLSG-FG---------------GAYYLLFLFNAVSLLVLLAA---------ALLTL 190
VY+ +G FG GA LF A++LL LL + LL +
Sbjct: 315 FLVYMSAGIFGFVMGGNYAAPGIASTGASGSLFGIIALTLLDLLYSWKDRRSPVKDLLFI 374
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHN 250
++ + I+ +G+LP +DNF+HIGGF+ G +LG +L P R + +
Sbjct: 375 IIDMVISFVLGLLPGLDNFSHIGGFLMGLVLGICVLHSPN-----------SLRRRIGPD 423
Query: 251 PYQYVLCIVALVLLIVGFTVGLVMLFRGENG----------------------------- 281
P+ Y A V F V F+G
Sbjct: 424 PF-YSAVPGAPEPGTVPFYKSPVGFFKGRKPLWWAWWLVRAAALVVIIVVFVVLLNNFYK 482
Query: 282 -NDHCSWCHYLSCVPTSKW 299
+ CSWC YLSC+P + W
Sbjct: 483 VGNTCSWCKYLSCLPVNGW 501
>gi|354548360|emb|CCE45096.1| hypothetical protein CPAR2_701000 [Candida parapsilosis]
Length = 664
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/238 (26%), Positives = 109/238 (45%), Gaps = 54/238 (22%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG-------- 165
+Q +R+ I+LHAG +H++ N+L + +G +E+ G ++ +Y++SG
Sbjct: 315 NQWYRIFIPIFLHAGFLHIIFNLLLQLTMGASIERNIGILKYAIIYIVSGISGFLLGANF 374
Query: 166 --------GAYYLLFLFNAVSLLVLLAAA---------------LLTLVVIIAINLAVGI 202
GA LF A ++++ + A + ++ I I+L +G+
Sbjct: 375 TPQGIASTGASGALFGIVATNIILFIYAGRKNTNMYGTTHYKLFIFFMICEIIISLVLGL 434
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKS-------RHNP---Y 252
LP +DNF+H+GGF G L VLLL+ F W + + +R + NP Y
Sbjct: 435 LPGLDNFSHLGGFAMGILTA-VLLLKDPF-WVYKDGIITYSRDPTTWQQFVNNWNPMYAY 492
Query: 253 QYVLCI----------VALVLLIVGFTVGLVMLFRGE-NGNDHCSWCHYLSCVPTSKW 299
+ L I VAL L+IV F + F + +++C WC Y +C+P W
Sbjct: 493 EDKLQIPFLLWCGARVVALALIIVYFALLCKNFFNDNYDSSENCKWCKYFNCIPVKGW 550
>gi|398408343|ref|XP_003855637.1| hypothetical protein MYCGRDRAFT_68129 [Zymoseptoria tritici IPO323]
gi|339475521|gb|EGP90613.1| hypothetical protein MYCGRDRAFT_68129 [Zymoseptoria tritici IPO323]
Length = 496
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 105/235 (44%), Gaps = 47/235 (20%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D Q WR I I+LHAG+IH+ N+L + +G +E+ G +R +Y +G FG
Sbjct: 237 DDQPAPDQWWRFIVPIFLHAGIIHIAFNLLLQLTLGRDVEKLVGSIRFAILYFAAGIFGF 296
Query: 166 --------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGI 202
G LF A++LL LL L+ ++V + I A+G+
Sbjct: 297 VLGGNFAATGIASTGCSGSLFGILAITLLDLLYTWKERTSPVKDLMFILVDMVIAFALGL 356
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP-----AQARVKSR--------H 249
LP +DNF+HIGGF+ G +LG LL P + + + AR + R
Sbjct: 357 LPGLDNFSHIGGFLMGLVLGVCLLRSPSEIARRKDDVDDVAYTSVARQEKRGDGLRRFAK 416
Query: 250 NPYQYV--------LCIVALVLLIVGFTVGLVMLFRG-ENGNDHCSWCHYLSCVP 295
+P + L I ++G + ++L + + CSWC YLSC+P
Sbjct: 417 SPLGFFQKRRGVWWLWIAIRGAALLGALIAFILLLKNFYVWKNTCSWCKYLSCLP 471
>gi|451847170|gb|EMD60478.1| hypothetical protein COCSADRAFT_40121 [Cochliobolus sativus ND90Pr]
Length = 535
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/242 (27%), Positives = 99/242 (40%), Gaps = 58/242 (23%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
DR +Q WR IT ++LHAGVIH+ NML +G +E++ G +R VY +G FG
Sbjct: 266 DRSHEPNQWWRFITPMFLHAGVIHIGFNMLLQWTLGRDMEKEIGPLRFALVYFSAGIFGF 325
Query: 166 --GAYYLLFLFNAV---------------------SLLVLLAAALLTLVVIIAINLAVGI 202
G Y +V S LL L++ +AI +G+
Sbjct: 326 VLGGNYAPDGITSVGCSGSLFGVLALTLLDLLYHWSTRRSPVKDLLFLLLDMAIAFVIGL 385
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQF-------GWAERHQLPAQARVKSRHNPYQYV 255
LP +DNF+HIGGF+ G +LG +L P+ G + Q +P V
Sbjct: 386 LPGLDNFSHIGGFLMGLVLGICILHSPEALRKRTGQGEPPYATVDTQPLAPKSESPVSKV 445
Query: 256 LCIV-----------------------ALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLS 292
+L+ + +GF + L + N CSWC +LS
Sbjct: 446 TAFAKQPIGFFKGRKPLWWAWWLVRAGSLMAVFIGFILLLRNFYEWRN---TCSWCKHLS 502
Query: 293 CV 294
C+
Sbjct: 503 CL 504
>gi|241859201|ref|XP_002416189.1| rhomboid, putative [Ixodes scapularis]
gi|215510403|gb|EEC19856.1| rhomboid, putative [Ixodes scapularis]
Length = 496
Score = 78.6 bits (192), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/213 (30%), Positives = 101/213 (47%), Gaps = 40/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL T ++LHAG+ HL ++ +F+ LE+ G VR +Y+ SG G
Sbjct: 290 QFYRLWTSLFLHAGIFHLCITVIVQLFVMRDLEKLAGPVRTAVIYMCSGVAGNLASAIFV 349
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + + + +L ++ALL L A+ +G+LP VDN+A
Sbjct: 350 PYRAEVGPAGAQFGLLACLFVEVIHCWQMLRRPSSALLKLGGGAAVLFLLGLLPWVDNYA 409
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ GF+ GFLL + LL FG +R V I A +++ V +
Sbjct: 410 HVFGFVFGFLLSYALLPFVSFGSYDR---------------TAKVALIWACLIVSVALFL 454
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
GLV+LF + CS+CHYL+C+P ++ C +
Sbjct: 455 GLVVLFYVHPIYE-CSFCHYLNCLPLTRDLCDS 486
>gi|295661783|ref|XP_002791446.1| DHHC zinc finger membrane protein [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226280003|gb|EEH35569.1| DHHC zinc finger membrane protein [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 521
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 108/282 (38%), Gaps = 87/282 (30%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
F + P P+ S QK +W +R I ++LHAG++H+ NM++ + I
Sbjct: 250 FRKRHKVPDPKPNGSIKQKPEPNQW---------FRFIVPMFLHAGLVHIGFNMMAQLTI 300
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGG-------------------------AYYLLFLFNAV 177
G +E+ G+ R VY SG G A L LF
Sbjct: 301 GADMERTIGWWRYAIVYFASGIFGFILGANFASSGIASTGASGCLSGILALACLDLFYTW 360
Query: 178 SLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERH 237
L+ +++ IAI+ +G+LP +DNF+HIGGF+ G +LG LL P
Sbjct: 361 GSRPKPVTELIIMLITIAISFVLGLLPGLDNFSHIGGFLVGLVLGISLLRSPD------- 413
Query: 238 QLPAQARVKSRHNPYQYVLCIVALV----------------------------------- 262
R+ + +PY+ V+ AL+
Sbjct: 414 ---RLRRIGAAGDPYEPVVASGALIEDGVESKKKKKKKKKNKFMATKPVKFFTGRKPLWW 470
Query: 263 ---LLIVGFTVGLVMLF-----RGENGNDHCSWCHYLSCVPT 296
L+ G VG+V+ F C WC YLSC+P+
Sbjct: 471 VWWLVRAGTLVGIVIAFILLLNNFYKYRSKCGWCKYLSCLPS 512
>gi|391344354|ref|XP_003746466.1| PREDICTED: inactive rhomboid protein 1-like [Metaseiulus
occidentalis]
Length = 692
Score = 78.2 bits (191), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 95/206 (46%), Gaps = 34/206 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL+T ++LHAG++H + +++ LE+ +G R+G +Y++SG GG
Sbjct: 474 QIYRLLTSLFLHAGLLHFALTAIVQMWLMRDLERIYGPHRIGAIYMMSGIGGNLASAIFV 533
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A ++ L L+ A L V+ I I + G+ P DNF
Sbjct: 534 PYRADVGPSAALFGIMAIFIAELVKLWDRLLDRKRATLHAVLPILIGIVCGLTPWTDNFG 593
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNP-YQYVLCIVALVLLIVGFT 269
H + G ++GFVL + P + L ++ R ++ LC +LV++ VG
Sbjct: 594 H----LFGLIIGFVLAMVPHNSEKQNADLDESQMIEYRRKARRRWCLCAASLVIVFVGLL 649
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVP 295
V +L + C++CHY +C+P
Sbjct: 650 VWFTIL-----PDIQCTFCHYFTCLP 670
>gi|348585385|ref|XP_003478452.1| PREDICTED: inactive rhomboid protein 1-like [Cavia porcellus]
Length = 856
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + + Y+ I+ + +G
Sbjct: 773 HISGFISGLFLSFAFLPYISFG---------------KFDLYRKRCQIIIFQAVFLGLLA 817
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC +L+C+P + C
Sbjct: 818 GLVILFYFYPVR--CEWCEFLTCIPFTDKFC 846
>gi|47226109|emb|CAG04483.1| unnamed protein product [Tetraodon nigroviridis]
Length = 626
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/208 (28%), Positives = 91/208 (43%), Gaps = 41/208 (19%)
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----------- 166
RL ++LHAGV+H L +++ + + +E+ G++RV +Y+LSG G
Sbjct: 426 RLWLSLFLHAGVLHCLVSVVFQMTVLRDIEKLVGWLRVSIIYMLSGITGNLASAIFLPYR 485
Query: 167 -------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIG 213
A + LF + +L A L+ I + G+LP +DNFAHI
Sbjct: 486 AEVGPAGSQFGILACLFVELFQSWPILERPWRAFAKLLAISTFFFSFGLLPWIDNFAHIC 545
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
GF++GF L F L F R + Y L I +L+ VG L+
Sbjct: 546 GFVSGFFLSFAFLPYISF---------------RRSDMYLKRLQICVFLLVFVGLLSALL 590
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+LF C WC YL+C+P + C
Sbjct: 591 VLFYVYPVK--CEWCEYLTCIPITDMFC 616
>gi|340522831|gb|EGR53064.1| predicted protein [Trichoderma reesei QM6a]
Length = 515
Score = 78.2 bits (191), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 103/235 (43%), Gaps = 55/235 (23%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------- 165
+Q +R I I++HAG+IH+ N+L + IG +E G +R VY+ +G FG
Sbjct: 278 NQWFRFIIPIFMHAGLIHIGFNLLMQLTIGKEMEIAIGSIRFFLVYMSAGIFGFVMGGNY 337
Query: 166 --------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGILPHVDN 208
GA LF A++LL LL + LL +++ + I+ +G+LP +DN
Sbjct: 338 AAPGIASTGASGSLFGIIALTLLDLLYSWKDRRSPVKDLLFIIIDMVISFVLGLLPGLDN 397
Query: 209 FAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGF 268
F+HIGGF+ G +LG +L P Q P + V P V VGF
Sbjct: 398 FSHIGGFLMGLVLGICVLHSPNSLRRRIGQDPLYSAVPGDAEP-----GTVPFYKSPVGF 452
Query: 269 TVGLVMLFRG------------------------ENGNDHCSWCHYLSCVPTSKW 299
G L+ + GN CSWC YLSC+P + W
Sbjct: 453 FKGRKPLWWAWWLVRAAALVVIIVVFVVLINNFYKVGNT-CSWCKYLSCLPVNGW 506
>gi|451997902|gb|EMD90367.1| hypothetical protein COCHEDRAFT_1179059 [Cochliobolus
heterostrophus C5]
Length = 535
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 99/242 (40%), Gaps = 58/242 (23%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
DR +Q WR IT ++LHAGVIH+ NML +G +E++ G +R VY +G FG
Sbjct: 266 DRSHEPNQWWRFITPMFLHAGVIHIGFNMLLQWTLGRDMEKEIGPLRFALVYFSAGIFGF 325
Query: 166 --GAYYLLFLFNAV---------------------SLLVLLAAALLTLVVIIAINLAVGI 202
G Y +V S L+ +++ +AI +G+
Sbjct: 326 VLGGNYAPDGITSVGCSGSLFGILALTLLDLLYNWSTRRSPVKDLIFILLDMAIAFVIGL 385
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQF-------GWAERHQLPAQARVKSRHNPYQYV 255
LP +DNF+HIGGF+ G +LG ++ P+ G + Q NP V
Sbjct: 386 LPGLDNFSHIGGFLMGLVLGICIIHSPEALRKRTGQGEPPYATVDTQPLAPKSENPASKV 445
Query: 256 LCIV-----------------------ALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLS 292
+L+ + +GF + L + N CSWC +LS
Sbjct: 446 TVFAKQPIGFFKGRKPLWWVWWLVRAGSLMAVFIGFILLLRNFYEWRN---TCSWCKHLS 502
Query: 293 CV 294
C+
Sbjct: 503 CL 504
>gi|119482167|ref|XP_001261112.1| S54 (rhomboid) family peptidase, putative [Neosartorya fischeri
NRRL 181]
gi|119409266|gb|EAW19215.1| S54 (rhomboid) family peptidase, putative [Neosartorya fischeri
NRRL 181]
Length = 524
Score = 77.8 bits (190), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/263 (26%), Positives = 111/263 (42%), Gaps = 73/263 (27%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I ++LH G+IH+ N+L + + +E+ G+ R FVYL SG
Sbjct: 249 DDRPEPNQWFRFIIPMFLHTGIIHIGFNLLVQMTMAADMERTVGWWRFAFVYLASGIWGF 308
Query: 164 -FGGAYYL-----------LFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGI 202
GG Y LF A+ +L LL A L+ +V+ IAI+ +G+
Sbjct: 309 VLGGNYAAQGESSCGCSGSLFGILALYILDLLYTWGERSSPWAELVIMVLGIAISFVLGL 368
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQLPAQARVKSRHNPYQYV-- 255
LP +DNF+HIGGF+ G G ++ LR + G A + + +P V
Sbjct: 369 LPGLDNFSHIGGFVMGLASGLCIMRSPNALRERIGLARNPYVAMTGAAGASADPGNKVTN 428
Query: 256 ---------------------------------------LCIVALVLLIVGFTVGLVMLF 276
+ + ALV +++GF + +V +
Sbjct: 429 PGSTIAEFFKAHKGSKSSKDSSALGFFKGRKPLWWAWWLVRLGALVAVLIGFILLIVDFY 488
Query: 277 RGENGNDHCSWCHYLSCVPTSKW 299
+ N CSWC+ LSC+P + W
Sbjct: 489 KYHTSN--CSWCYRLSCLPVNDW 509
>gi|67900700|ref|XP_680606.1| hypothetical protein AN7337.2 [Aspergillus nidulans FGSC A4]
gi|40742518|gb|EAA61708.1| hypothetical protein AN7337.2 [Aspergillus nidulans FGSC A4]
Length = 1070
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 111/250 (44%), Gaps = 64/250 (25%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D Q +R I ++LH+G +H+ N+L + +G +E+ G+ R G VYL SG
Sbjct: 243 DDKPAPDQWFRFIIPMFLHSGFVHIGFNLLVQMTMGADMERMIGWWRYGLVYLSSGIWGF 302
Query: 164 -FGGAYY-----------LLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GG Y LF A+ +L LL L+ +V+ IA++ +G+
Sbjct: 303 VLGGNYAGQGEASCGCSGALFGILALFVLDLLYGWNDRQNPWVELIIMVLGIAVSFVLGL 362
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQF-----------------GWAERHQLPAQARV 245
LP +DNF+H+GGF G LG ++ P G A + P Q +
Sbjct: 363 LPGLDNFSHLGGFTMGLALGLCVMRSPNALRERIGLARSPYVAMSGGVAAENADPDQNKT 422
Query: 246 KS--------RHNPYQY------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHC 285
+ + NP + ++ + ALV +++GF + +V ++ + N C
Sbjct: 423 STGSNIGGLGKFNPKGFFAGRKPLWWAWWLVRLGALVAVLIGFILLIVNFYKYPSSN--C 480
Query: 286 SWCHYLSCVP 295
SWC+ SC+P
Sbjct: 481 SWCYRFSCLP 490
>gi|415885504|ref|ZP_11547432.1| Serine protease of Rhomboid family [Bacillus methanolicus MGA3]
gi|387591173|gb|EIJ83492.1| Serine protease of Rhomboid family [Bacillus methanolicus MGA3]
Length = 518
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 83/153 (54%), Gaps = 23/153 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
++STL + GA +++ +++E + WR T I+LH G++HLL N L+L ++G +E+ +G VR
Sbjct: 207 NTSTLIRFGA-KFNPLINEGEWWRFFTPIFLHIGLLHLLMNTLALYYLGTVVERIYGNVR 265
Query: 155 VGFVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVI 193
+YL +GF G+ + L F + + + ++V+
Sbjct: 266 FMLIYLAAGFAGSLASFVFSPSLSAGASGAIFGCFGALLYFGVIHPRLFFRTMGMNILVV 325
Query: 194 IAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVL 225
+ INLA+G LP +DN HIGG + GFL VL
Sbjct: 326 LGINLALGFTLPGIDNAGHIGGLIGGFLAAGVL 358
>gi|353234818|emb|CCA66839.1| related to membrane protein [Piriformospora indica DSM 11827]
Length = 577
Score = 77.8 bits (190), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 99/211 (46%), Gaps = 40/211 (18%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-----FGG 166
+Q +R IT I+LHAG+IH L NM + + ++E++ G + +Y G GG
Sbjct: 365 EPNQWFRFITPIFLHAGIIHFLLNMFAQWVLSGQVEREMGSIGFFILYFACGVFGNILGG 424
Query: 167 AYYLLFLFNAVSLLVLLAAALLTLVVIIA----------------INL----AVGILPHV 206
+ L+ + + ++ + V +IA INL +G +P V
Sbjct: 425 NFALVGQPSVGASGAIVGTLAVLWVDLIAHWGIEYKPVQKLIGHIINLVLVVGMGYIPGV 484
Query: 207 DNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIV 266
DNF+H+GG + G + G +LL P +RH++ + L I + L IV
Sbjct: 485 DNFSHLGGLLMGLITGIILL--PIISTTKRHKM------------IVWALRIAMIPLAIV 530
Query: 267 GFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
F V L+ F + + CSWC YLSC+PT+
Sbjct: 531 LFVV-LIRNFYTGDPSKACSWCRYLSCIPTA 560
>gi|448535206|ref|XP_003870930.1| Rbd1 rhomboid-like protein [Candida orthopsilosis Co 90-125]
gi|380355286|emb|CCG24803.1| Rbd1 rhomboid-like protein [Candida orthopsilosis]
Length = 658
Score = 77.4 bits (189), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 60/236 (25%), Positives = 106/236 (44%), Gaps = 50/236 (21%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
+Q +R+ I+LHAG +H++ N+L + +G +E+ G ++ +Y+ SG G
Sbjct: 314 NQWYRIFIPIFLHAGFLHIIFNLLLQLTMGASIERNIGILKYAIIYIASGISGFLLGANF 373
Query: 167 ---------AYYLLFLFNAVSLLVLLAAA---------------LLTLVVIIAINLAVGI 202
A LF A ++++ + + ++ I I+L +G+
Sbjct: 374 TPQGIASTGASGALFGIVATNIILFIYTGRKNTNMYGTTHYKLFIFFMICEIVISLVLGL 433
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE------RHQLPAQARVKSRHNPYQY-- 254
LP +DNF+H+GGF G L +LL P + + + R Q V + + Y Y
Sbjct: 434 LPGLDNFSHLGGFAMGILTAVLLLKDPFWVYKDGIITYTRDPTTWQQFVNNWNPMYAYED 493
Query: 255 -------VLC---IVALVLLIVGFTVGLVMLFRGE-NGNDHCSWCHYLSCVPTSKW 299
+ C +VAL L+IV F + F + +++C WC Y +C+P W
Sbjct: 494 KLQVPFLLWCGARVVALALIIVYFALLCKNFFNDNYDSSENCKWCKYFNCIPVKGW 549
>gi|402594966|gb|EJW88892.1| hypothetical protein WUBG_00197 [Wuchereria bancrofti]
Length = 983
Score = 77.4 bits (189), Expect = 7e-12, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 107/241 (44%), Gaps = 41/241 (17%)
Query: 88 ENPLFGPSSSTLQKL-GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
EN S L ++ G L + R Q +RL ++LHAG+IH + + + L
Sbjct: 748 ENATLCSQVSCLSEICGMLPFLRKDRPDQWYRLFIPLFLHAGIIHCILTVFIQILYMRDL 807
Query: 147 EQQFGFVRVGFVYLLSGFG----GAYYLLF------------LFNAVSLLVLLA------ 184
E+ G+ RV +Y++SG G GA ++ + +F A+ + VL +
Sbjct: 808 EKLLGWARVALLYMVSGIGGYLAGAIFVPYRPEVGPAGSHVGMFAAMYVDVLYSWNLLER 867
Query: 185 --AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQ 242
A++ L + A+G LP VDN+AH+ GF+ G L+ +L Q
Sbjct: 868 PWHAVVQLSLFTLALFAIGTLPWVDNWAHLFGFIFGILISLAVLPYIQ------------ 915
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCG 302
RHN + ++ +V + + V L+ +F +G C +C Y +C+P + C
Sbjct: 916 ---TKRHNRTRRIIIVVTSLSTALSLFVVLLAVFYWPSGFS-CVYCEYFNCIPYTDHFCD 971
Query: 303 N 303
N
Sbjct: 972 N 972
>gi|328857613|gb|EGG06729.1| hypothetical protein MELLADRAFT_43423 [Melampsora larici-populina
98AG31]
Length = 517
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 65/207 (31%), Positives = 98/207 (47%), Gaps = 40/207 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG-------- 165
Q +R I ++LHAGVIH N+L + +E+Q G +R +Y+ SG FG
Sbjct: 270 QTFRFILPMFLHAGVIHYAINILVQMTSSALIERQMGSIRFLLLYIPSGIFGFILGGNFS 329
Query: 166 -------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHVDNF 209
GA +F +A L+ L+A L L+ I LA+G++P +DNF
Sbjct: 330 LVGQPSVGASGAIFSTHAAVLVDLVAHWSIEDRPARKLFFLLFEIIAGLALGLIPGIDNF 389
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
+H+GGF G LL +L P + H++ Y + +V L+ I+ F+
Sbjct: 390 SHLGGFAMGLLLSLILF--PVLHQTKLHRISF------------YTMRLVCLLGSILMFS 435
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPT 296
+ L F ++ CSWC YLSC PT
Sbjct: 436 L-LYRNFFTDDPAASCSWCRYLSCWPT 461
>gi|291002015|ref|XP_002683574.1| predicted protein [Naegleria gruberi]
gi|284097203|gb|EFC50830.1| predicted protein [Naegleria gruberi]
Length = 168
Score = 77.4 bits (189), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 87/165 (52%), Gaps = 25/165 (15%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEH-QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
NPL GP +TL +LGA + ++ + Q +RL+T I+LH G++HL NM+ + + + LE
Sbjct: 1 NPLIGPPEATLVQLGAKQGTLIISPNWQVYRLLTPIFLHGGIVHLCLNMMWQMSVMLPLE 60
Query: 148 QQFGFVRVGFVYLLSGFGGAYY-LLFLFNAV------SLLVLLAAA-------------- 186
+ +G + V F+YL+SG GG LFL V SL +L
Sbjct: 61 RHWGCIFVCFIYLISGVGGNLLSALFLPEIVTVGASSSLFGILGGIYADLWMNWRYMPSP 120
Query: 187 ---LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLR 228
+ + + + + VG++P +DNFAH+GG + GFL + + R
Sbjct: 121 KRDFILITIQVVAQVIVGLIPWIDNFAHVGGLLVGFLSTMIFIPR 165
>gi|367024201|ref|XP_003661385.1| hypothetical protein MYCTH_2300708 [Myceliophthora thermophila ATCC
42464]
gi|347008653|gb|AEO56140.1| hypothetical protein MYCTH_2300708 [Myceliophthora thermophila ATCC
42464]
Length = 551
Score = 77.0 bits (188), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 110/243 (45%), Gaps = 55/243 (22%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R I I++HAGVIH+ NML + + +E+ G +R VY+ +G FG
Sbjct: 305 DTKPAPNQWFRFIIPIFMHAGVIHIGFNMLLQLTLARDMEKSIGSIRFFLVYMSAGIFGF 364
Query: 166 --------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGI 202
GA LF A++LL LL L+ +++ + I+ +G+
Sbjct: 365 VMGGNYAGNAVASTGASGSLFGIIALTLLDLLYSWKDRVSPVKDLVFILLDVIISFVLGL 424
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQF------------------GWAERHQLPAQAR 244
LP +DNF+HIGGF+ G LG +L P G+A + P+ +
Sbjct: 425 LPGLDNFSHIGGFLMGLALGICVLHSPNSLRRRIGDDVPYAHSDVSGGFAAQGTPPSFLK 484
Query: 245 -----VKSRHNPYQYVLCIV---ALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPT 296
K R P + ++ ALVL+ V F V L + + CSWC YLSC+P
Sbjct: 485 NPVGFFKGR-KPLWWAWWLIRAGALVLVTVVFIVLLNNFYVDQR---TCSWCKYLSCLPI 540
Query: 297 SKW 299
W
Sbjct: 541 HDW 543
>gi|381210355|ref|ZP_09917426.1| hypothetical protein LGrbi_10556 [Lentibacillus sp. Grbi]
Length = 520
Score = 77.0 bits (188), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 99/212 (46%), Gaps = 49/212 (23%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S+ TL + GA ++ + + WR++ ++LH G++HLL NML++ ++G +E+ +G +R
Sbjct: 208 STETLIEFGAKYNPAIIEDGEWWRIVASMFLHIGILHLLMNMLAVYYLGTVVERIYGSLR 267
Query: 155 VGFVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVI 193
+Y L+G GG + L F + + + L+ I
Sbjct: 268 FLIIYFLAGIGGGLASFAFTTNVSAGASGALFGLFGALLFFGCIHRRIFFQTMGMNLLFI 327
Query: 194 IAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPY 252
I IN+ G+ +P VDN AH+GG + GF+ +L L K ++ P
Sbjct: 328 IGINIVFGLSVPQVDNGAHMGGLITGFIASAILFL-----------------PKKKNRPI 370
Query: 253 QYVLCIVALVLLIVGFTVGLVMLFRGENGNDH 284
Q L V L +LIV +GLV+ G DH
Sbjct: 371 Q--LAAVILYMLIV---LGLVIY-----GMDH 392
>gi|302497075|ref|XP_003010538.1| hypothetical protein ARB_03239 [Arthroderma benhamiae CBS 112371]
gi|291174081|gb|EFE29898.1| hypothetical protein ARB_03239 [Arthroderma benhamiae CBS 112371]
Length = 479
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 104/236 (44%), Gaps = 53/236 (22%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R I ++LHAG++H+ N+ + + IG +E+ G+ R VY SG FG
Sbjct: 237 DDKPEPNQWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGF 296
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A+ +L L L +V+ +AI+ +G+
Sbjct: 297 VLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGL 356
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA------------QARVKSRHN 250
LP +DNF+HIGGF+ G +LG +L P ER + + + K
Sbjct: 357 LPGLDNFSHIGGFLTGLVLGICILRSPD-TLRERIGVKTPYVSMGGNLGVDEDQKKFFKQ 415
Query: 251 PYQY------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCV 294
P + +L AL+ +IV F V L ++ CSWC YLSC+
Sbjct: 416 PVTFFQGRKPLWWGWWLLRAGALIGIIVSFIVLLNNFYKYRTS---CSWCKYLSCL 468
>gi|57088635|ref|XP_547222.1| PREDICTED: inactive rhomboid protein 1 isoform 1 [Canis lupus
familiaris]
Length = 856
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + + Y+ I+ ++ +G
Sbjct: 773 HISGFISGLFLSFAFLPYISFG---------------KFDLYRKRCQIIVFQVVFLGLLA 817
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC +L+C+P + C
Sbjct: 818 GLVILFYFYPVR--CEWCEFLTCIPFTDKFC 846
>gi|358401351|gb|EHK50657.1| hypothetical protein TRIATDRAFT_52595 [Trichoderma atroviride IMI
206040]
Length = 510
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/236 (29%), Positives = 103/236 (43%), Gaps = 55/236 (23%)
Query: 113 EHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------ 165
+Q +R I I++HAG+IH+ N+L + IG +E G +R VY+ +G FG
Sbjct: 272 PNQWFRFIIPIFMHAGLIHIGFNLLMQLTIGKEMEIAIGSIRFFLVYMSAGIFGFVMGGN 331
Query: 166 ---------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGILPHVD 207
GA LF A++L+ LL + LL +++ + I+ +G+LP +D
Sbjct: 332 YAAPGIASTGASGSLFGIIALTLIDLLYSWKDRRSPVKDLLFIIIDMVISFVLGLLPGLD 391
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
NF+HIGGF+ G +LG LL P P + V +P V VG
Sbjct: 392 NFSHIGGFLMGLVLGICLLHSPNSLRRRIGPDPFYSAVPGAQDP-----DTVPFYKNPVG 446
Query: 268 FTVGLVMLFRG------------------------ENGNDHCSWCHYLSCVPTSKW 299
F G L+ + GN CSWC YLSC+P + W
Sbjct: 447 FFKGRKPLWWAWWLVRAAALVAVIVVFVVLIHNFYKIGNT-CSWCKYLSCLPVNGW 501
>gi|169775935|ref|XP_001822434.1| DHHC zinc finger membrane protein [Aspergillus oryzae RIB40]
gi|83771169|dbj|BAE61301.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 518
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 101/261 (38%), Gaps = 69/261 (26%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I I+LH G IH+ N+L + +G+ +E+ G+ R G VY SG
Sbjct: 239 DDQPEPNQWYRFIVPIFLHGGFIHIGFNLLCQMTMGVDMERMVGWWRYGLVYFASGIWGF 298
Query: 164 -FGGAYYLLF---------LFNAVSLLVL-----------LAAALLTLVVIIAINLAVGI 202
GG Y F LF ++L +L L+ +V+ + I+ +G+
Sbjct: 299 VLGGNYAAPFQPSSGCSGALFGILALFILDLFYTWKERPSPFVELIIMVLGVGISFVLGL 358
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
LP +DNF+HIGGF+ G LG ++ LR + G A + +
Sbjct: 359 LPGLDNFSHIGGFIMGLALGLCIMRSPNALRERIGLARNPYVAMSGGAGPTSDDENKTTT 418
Query: 258 IVALVLLIVGF--------TVGLVMLFRGEN----------------------------- 280
+ V L G T G + F+G
Sbjct: 419 GPSFVNLFKGRTGPNSSSETAGPLGFFKGRKPLWWAWWLVRAGALVAVIVGFILLIVNFY 478
Query: 281 --GNDHCSWCHYLSCVPTSKW 299
+CSWC+ LSC+P W
Sbjct: 479 KYPKSNCSWCYRLSCLPVHDW 499
>gi|238502587|ref|XP_002382527.1| rhomboid family membrane protein [Aspergillus flavus NRRL3357]
gi|220691337|gb|EED47685.1| rhomboid family membrane protein [Aspergillus flavus NRRL3357]
gi|391871078|gb|EIT80244.1| Rhomboid family protein [Aspergillus oryzae 3.042]
Length = 518
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 101/261 (38%), Gaps = 69/261 (26%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I I+LH G IH+ N+L + +G+ +E+ G+ R G VY SG
Sbjct: 239 DDQPEPNQWYRFIVPIFLHGGFIHIGFNLLCQMTMGVDMERMVGWWRYGLVYFASGIWGF 298
Query: 164 -FGGAYYLLF---------LFNAVSLLVL-----------LAAALLTLVVIIAINLAVGI 202
GG Y F LF ++L +L L+ +V+ + I+ +G+
Sbjct: 299 VLGGNYAAPFQPSSGCSGALFGILALFILDLFYTWKERPSPFVELIIMVLGVGISFVLGL 358
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
LP +DNF+HIGGF+ G LG ++ LR + G A + +
Sbjct: 359 LPGLDNFSHIGGFIMGLALGLCIMRSPNALRERIGLARNPYVAMSGGAGPTSDDENKTTT 418
Query: 258 IVALVLLIVGF--------TVGLVMLFRGEN----------------------------- 280
+ V L G T G + F+G
Sbjct: 419 GPSFVNLFKGRTGPNSSSETAGPLGFFKGRKPLWWAWWLVRAGALVAVIVGFILLIVNFY 478
Query: 281 --GNDHCSWCHYLSCVPTSKW 299
+CSWC+ LSC+P W
Sbjct: 479 KYPKSNCSWCYRLSCLPVHDW 499
>gi|387929721|ref|ZP_10132398.1| serine protease of Rhomboid family [Bacillus methanolicus PB1]
gi|387586539|gb|EIJ78863.1| serine protease of Rhomboid family [Bacillus methanolicus PB1]
Length = 518
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/153 (32%), Positives = 82/153 (53%), Gaps = 23/153 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
++STL + GA +++ ++ E + WR T I+LH G++HLL N LSL ++G +E+ +G VR
Sbjct: 207 NTSTLIRFGA-KFNLLIIEGEWWRFFTPIFLHVGLLHLLMNTLSLYYLGTVVERLYGNVR 265
Query: 155 VGFVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVI 193
+YL +GF G+ + L F + + + ++V+
Sbjct: 266 FLLIYLFAGFAGSLTSFVFSPSLSAGASGAIFGCFGALLYFGVIHPGLFFRTMGMNILVV 325
Query: 194 IAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
+ INLA+G LP +DN HIGG + GFL +L
Sbjct: 326 LGINLALGFTLPGIDNAGHIGGLIGGFLAAGIL 358
>gi|170593681|ref|XP_001901592.1| Rhomboid family protein [Brugia malayi]
gi|158590536|gb|EDP29151.1| Rhomboid family protein [Brugia malayi]
Length = 1013
Score = 76.6 bits (187), Expect = 1e-11, Method: Composition-based stats.
Identities = 63/241 (26%), Positives = 109/241 (45%), Gaps = 41/241 (17%)
Query: 88 ENPLFGPSSSTLQKL-GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
EN S L ++ G L + R Q +RL ++LHAG+IH + + + L
Sbjct: 778 ENATLCSQVSCLSEVCGMLPFLRKDQPDQWYRLFIPLFLHAGIIHCILTIFIQILYMRDL 837
Query: 147 EQQFGFVRVGFVYLLSGFG----GAYYLLF------------LFNAVSLLVLLAAALL-- 188
E+ G+ R+ +Y++SG G GA ++ + +F A+ + VL + LL
Sbjct: 838 EKLLGWARIALLYMVSGVGGYLAGAIFVPYRPEVGPAGSHVGMFAAMYVDVLYSWNLLER 897
Query: 189 ---TLVVIIAINLA---VGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQ 242
+V + LA +G LP VDN+AH+ GF+ G L+ +L Q
Sbjct: 898 PWHAVVQLSLFTLALFTIGTLPWVDNWAHLFGFIFGILISLAVLPYIQ------------ 945
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCG 302
RHN + ++ +V + + + L+ +F +G + C +C Y +C+P + C
Sbjct: 946 ---TKRHNRTRRIIIVVTSLTTALSLFIVLLAVFYWPSGFN-CVYCEYFNCIPYTDHFCD 1001
Query: 303 N 303
N
Sbjct: 1002 N 1002
>gi|299755411|ref|XP_001828645.2| hypothetical protein CC1G_10517 [Coprinopsis cinerea okayama7#130]
gi|298411214|gb|EAU93149.2| hypothetical protein CC1G_10517 [Coprinopsis cinerea okayama7#130]
Length = 502
Score = 76.6 bits (187), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 85/168 (50%), Gaps = 29/168 (17%)
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
T+ L + + +Q +R IT I+LHAG+IHLL NML+ + ++E+ G
Sbjct: 265 TVADLCSFGYKAGQEPNQWFRFITAIFLHAGIIHLLLNMLAQFTLSAQIERDMGSTGFLI 324
Query: 158 VYLLSG-FG---------------GAYYLLFLFNAVSLLVLLA-----------AALLTL 190
VY +G FG GA +F AV+ + LLA L+ +
Sbjct: 325 VYFAAGIFGNVLGGNFSLVGIPSVGASGAIFGTLAVTWVDLLAHWKYQYRPVRKVGLVFM 384
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
+ +AI +A+G +P+VDNFAH+GGF+ G L+G + P ++RH+
Sbjct: 385 TIELAIGVAIGFIPYVDNFAHLGGFLMGLLVGTIFY--PVISASKRHK 430
>gi|386714819|ref|YP_006181142.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
gi|384074375|emb|CCG45868.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
Length = 510
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/150 (37%), Positives = 85/150 (56%), Gaps = 27/150 (18%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S STL + GA +++ + E + WR+ + ++LH G++HLL NML+L +IGI +E+ +G R
Sbjct: 207 SVSTLIEFGA-KYNPAIMEGEWWRIGSSMFLHIGLLHLLMNMLALYYIGIAVERIYGTWR 265
Query: 155 VGFVYLLSG-FGGAYYLLFLFN------AVSLLVLLAAALL----------------TLV 191
+YLL+G FGG F+ N A + L ALL L+
Sbjct: 266 FSVIYLLAGIFGGV--ASFMLNPHVAAGASGAIFGLFGALLYFGVRHRQLFFKTMGWNLI 323
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFL 220
+IA+N+A GI+ P VDN AH+GG + GF+
Sbjct: 324 FVIALNIAFGIMVPQVDNGAHMGGLIGGFI 353
>gi|402221037|gb|EJU01107.1| rhomboid-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 338
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 133/319 (41%), Gaps = 71/319 (22%)
Query: 33 SDQQWTSWLIPMFVVANVAVFIVAMYINNC---------PKNNWEGGRG------CVARF 77
+ Q+W S ++P+ VA ++VFI + +N P N+ G G ARF
Sbjct: 22 TRQRW-SIVVPILTVAMISVFIYELVLNAHFQGTPVSFHPTVNYMLGPGGSTLINVGARF 80
Query: 78 LGRLSFEPLKE--------NPLFGPSS-----STLQKLGALEWDRVVHEHQGWRLITCIW 124
+ + P N P+ ST+ G D V +Q +R I I+
Sbjct: 81 VPCMKLVPEVPPTTQLACMNDTANPADQICPLSTVCGFGGFPADGV--PNQWFRFILPIF 138
Query: 125 LHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-----FGGAYYLLFLFN---A 176
LH G+IH+L NML+ + +E+Q G +Y +G GG + LL + + +
Sbjct: 139 LHVGIIHILLNMLAQATLCTLVERQVGSTAFIIIYFAAGIFGNVLGGNFALLGITSMGAS 198
Query: 177 VSLLVLLAAALLTLVV-----------------IIAINLAVGILPHVDNFAHIGGFMAGF 219
++ +AA + L+ I +G +P VDNFAH+GGF+ G
Sbjct: 199 GAIFGCVAAQWVDLLTHWNLEDRPGRSLIFLIIEFIIGFGLGYIPGVDNFAHLGGFLMGL 258
Query: 220 LLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGE 279
L VL V H +V I+A+ L+IV F V L+ F
Sbjct: 259 LTCIVLF--------------PVISVTRTHMIVVWVCRILAIPLIIVLFVV-LIRNFYTT 303
Query: 280 NGNDHCSWCHYLSCVPTSK 298
+ C WC YLSC+PTS
Sbjct: 304 DPAAGCEWCRYLSCIPTSA 322
>gi|395334565|gb|EJF66941.1| rhomboid-domain-containing protein [Dichomitus squalens LYAD-421
SS1]
Length = 360
Score = 76.3 bits (186), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 83/284 (29%), Positives = 126/284 (44%), Gaps = 84/284 (29%)
Query: 81 LSFEPLKENPLFGPSSSTLQKLGAL---------------------EWDRVVHE------ 113
SF+P+ NP+ GPSSS L +LGA D +
Sbjct: 81 FSFKPVV-NPMLGPSSSALIELGARFPPCMKNVTDFPITTAVPCLNNTDNPATQLCSLED 139
Query: 114 ------------HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
Q +R IT I+LHAG+IH L NML+ + + ++E++ G + +YL
Sbjct: 140 ICGFGGFHNEVPDQWFRFITPIFLHAGLIHFLLNMLAQMTVSAQVEREMGTIAFLILYLA 199
Query: 162 SG-FG---------------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAI 196
+G FG GA +F AV+ + L A L+ +++ + I
Sbjct: 200 AGIFGNVLGGNFSLVGSPSVGASGAIFGTVAVAWVDLFAHWRYTYQPGKKLVFMIIELVI 259
Query: 197 NLAVGILPHVDNFAHIGGFMAGFLLGFVL--LLRPQFGWAERHQLPAQARVKSRHNPYQY 254
+A+G +P+VDNFAH+GG + G L+G L ++ P +RH
Sbjct: 260 GVAIGFIPYVDNFAHLGGLLMGLLVGMALYPIISP----------------STRHRTIII 303
Query: 255 VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
L ++A+ L IV F V L+ F + CSWC YLSC+P+S
Sbjct: 304 ALRLIAVPLAIVLFVV-LLRNFYTSDPYAACSWCRYLSCIPSSS 346
>gi|312077777|ref|XP_003141452.1| rhomboid family protein [Loa loa]
Length = 989
Score = 76.3 bits (186), Expect = 2e-11, Method: Composition-based stats.
Identities = 72/301 (23%), Positives = 125/301 (41%), Gaps = 62/301 (20%)
Query: 38 TSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEP----------LK 87
T W + +FV NV M++ C GR C + G+
Sbjct: 705 THWPVTLFVPENV------MHMQ-CEIT----GRPCCIQLHGQCRITTRDYCDFVEGYFH 753
Query: 88 ENPLFGPSSSTLQKL-GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
EN S L ++ G L + R Q +RL ++LHAG+IH + + + L
Sbjct: 754 ENATLCSQVSCLSEICGMLPFLRKNQPDQWYRLFIPLFLHAGIIHCILTVFIQMLYMRDL 813
Query: 147 EQQFGFVRVGFVYLLSGFG----GAYYLLF------------LFNAVSLLVLLA------ 184
E+ G+ RV +Y++ G G GA ++ + +F A+ + V+ +
Sbjct: 814 EKLLGWARVALLYMVPGIGGYLAGAIFVPYKPEVGPAGSHVGMFAAMYVDVVYSWNLLER 873
Query: 185 --AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQ 242
A++ L + AVG LP VDN+AH GF+ G L+ +L Q
Sbjct: 874 PWHAIMQLSLFTVAVFAVGTLPWVDNWAHFFGFIFGILVSLAVLPYIQ------------ 921
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCG 302
HN + ++ ++ + ++ G V L+ +F + + C++C Y +C+P + C
Sbjct: 922 ---TKHHNRARRLIIVITSLSIVFGLFVVLLTMFYWPSAFN-CTYCEYFNCIPYTDHFCD 977
Query: 303 N 303
N
Sbjct: 978 N 978
>gi|410896139|ref|XP_003961557.1| PREDICTED: inactive rhomboid protein 1-like [Takifugu rubripes]
Length = 847
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 94/208 (45%), Gaps = 41/208 (19%)
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----------- 166
RL ++LHAG++H L ++ + + +E+ G++RV +Y+LSG G
Sbjct: 647 RLWLSLFLHAGILHCLVSVFFQMTVLRDIEKLAGWLRVSIIYMLSGITGNLASSIFLPYR 706
Query: 167 -------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIG 213
A + LF + +L AL L+ I + G+LP +DNFAHI
Sbjct: 707 AEVGPAGSQFGILACLFVELFQSWQILERPWRALGKLLAISTFLFSFGLLPWIDNFAHIC 766
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
GF++GF L F L FG R + Y+ L I +L+ +G LV
Sbjct: 767 GFVSGFFLSFTFLPYISFG---------------RSDMYRKRLQICVFLLVFLGLLATLV 811
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+LF C WC YL+C+P ++ C
Sbjct: 812 VLFYVYPVK--CDWCEYLTCIPITEMFC 837
>gi|407796208|ref|ZP_11143164.1| S54 family peptidase [Salimicrobium sp. MJ3]
gi|407019562|gb|EKE32278.1| S54 family peptidase [Salimicrobium sp. MJ3]
Length = 507
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 82/149 (55%), Gaps = 25/149 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S STL + GA +++ + E + WRLI+ ++LH GV+HLL NML+L ++G +EQ +G R
Sbjct: 206 SISTLIEYGA-KYNPGIIEGEWWRLISSMFLHIGVLHLLMNMLALFYLGTAVEQIYGSFR 264
Query: 155 VGFVYLLSGFGGAYYLLFLFN------AVSLLVLLAAALL----------------TLVV 192
+Y L+G G+ F FN A + L ALL L++
Sbjct: 265 FTMIYFLAGILGS-AASFYFNTSVAAGASGAIFGLFGALLYFAWRYPSLFFRTMGWNLII 323
Query: 193 IIAINLAVGI-LPHVDNFAHIGGFMAGFL 220
++AIN+ GI +P VDN H+GG + GFL
Sbjct: 324 LVAINIVFGITVPQVDNSGHMGGLIGGFL 352
>gi|393912104|gb|EFO22618.2| rhomboid family protein [Loa loa]
Length = 1003
Score = 75.9 bits (185), Expect = 2e-11, Method: Composition-based stats.
Identities = 60/241 (24%), Positives = 107/241 (44%), Gaps = 41/241 (17%)
Query: 88 ENPLFGPSSSTLQKL-GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
EN S L ++ G L + R Q +RL ++LHAG+IH + + + L
Sbjct: 768 ENATLCSQVSCLSEICGMLPFLRKNQPDQWYRLFIPLFLHAGIIHCILTVFIQMLYMRDL 827
Query: 147 EQQFGFVRVGFVYLLSGFG----GAYYLLF------------LFNAVSLLVLLA------ 184
E+ G+ RV +Y++ G G GA ++ + +F A+ + V+ +
Sbjct: 828 EKLLGWARVALLYMVPGIGGYLAGAIFVPYKPEVGPAGSHVGMFAAMYVDVVYSWNLLER 887
Query: 185 --AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQ 242
A++ L + AVG LP VDN+AH GF+ G L+ +L Q
Sbjct: 888 PWHAIMQLSLFTVAVFAVGTLPWVDNWAHFFGFIFGILVSLAVLPYIQ------------ 935
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCG 302
HN + ++ ++ + ++ G V L+ +F + + C++C Y +C+P + C
Sbjct: 936 ---TKHHNRARRLIIVITSLSIVFGLFVVLLTMFYWPSAFN-CTYCEYFNCIPYTDHFCD 991
Query: 303 N 303
N
Sbjct: 992 N 992
>gi|393788564|ref|ZP_10376691.1| hypothetical protein HMPREF1068_02971 [Bacteroides nordii
CL02T12C05]
gi|392654244|gb|EIY47892.1| hypothetical protein HMPREF1068_02971 [Bacteroides nordii
CL02T12C05]
Length = 467
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 82/161 (50%), Gaps = 25/161 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
LF P + L + GA ++ + WR +TC ++H G++H+L NM +LV+IG+ LE F
Sbjct: 59 LFEPKTLELLQWGA-DFGPLTLTGSWWRTLTCNFVHIGIVHILMNMYALVYIGVLLEPMF 117
Query: 151 GFVRVGFVYLLSGFGGAYYLLF-------------LFNAVSLLVLL-----------AAA 186
G R+ YLL+G A LF +F + + A
Sbjct: 118 GTRRMFAAYLLTGLCSAVSSLFWHAETISAGASGAIFGLYGIFLAFLCFHHIEKAQRNAL 177
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLL 227
L ++++ + NL G+ +DN AHIGG ++GF+LGFV ++
Sbjct: 178 LSSILIFVGYNLIYGLKEGIDNAAHIGGLISGFILGFVYVM 218
>gi|261200367|ref|XP_002626584.1| rhomboid family membrane protein [Ajellomyces dermatitidis
SLH14081]
gi|239593656|gb|EEQ76237.1| rhomboid family membrane protein [Ajellomyces dermatitidis
SLH14081]
Length = 516
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 27/156 (17%)
Query: 100 QKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVY 159
+ G+LE D+ +Q +R I I+LH+G+IH+ NM++ + IG +E+ G+ R VY
Sbjct: 286 KPQGSLE-DKP-EPNQWFRFIVPIFLHSGLIHIGFNMMAQLTIGADMERTIGWWRYALVY 343
Query: 160 LLSG-FG---------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVII 194
SG FG GA LF A++ L LL L+ +++ I
Sbjct: 344 FASGIFGFILGANFAPAGIASTGASGCLFGIFALAFLDLLYTWGTRPKPVTELVVMLITI 403
Query: 195 AINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
I+ +G+LP +DNF+HIGGF+ G +LG +L P
Sbjct: 404 GISFVLGLLPGLDNFSHIGGFLVGLVLGISVLRSPD 439
>gi|302663450|ref|XP_003023367.1| hypothetical protein TRV_02469 [Trichophyton verrucosum HKI 0517]
gi|291187361|gb|EFE42749.1| hypothetical protein TRV_02469 [Trichophyton verrucosum HKI 0517]
Length = 507
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 68/236 (28%), Positives = 104/236 (44%), Gaps = 53/236 (22%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D +Q +R I ++LHAG++H+ N+ + + IG +E+ G+ R VY SG FG
Sbjct: 265 DDKPEPNQWFRFIVPMFLHAGLVHIGFNLFAQLSIGADMERTIGWWRYAIVYFSSGIFGF 324
Query: 166 --------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GA LF A+ +L L L +V+ +AI+ +G+
Sbjct: 325 VLGGNFAAPAIASTGASGCLFGIFALCVLDLFYTWGKKQRPWVDLTFMVITVAISFVLGL 384
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA------------QARVKSRHN 250
LP +DNF+HIGGF+ G +LG +L P ER + + + K
Sbjct: 385 LPGLDNFSHIGGFLTGLVLGICILRSPD-TLRERIGVKTPYVSMGGNLGVDEDQKKFFKQ 443
Query: 251 PYQY------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCV 294
P + +L AL+ +IV F V L ++ CSWC YLSC+
Sbjct: 444 PVTFFQGRKPLWWGWWLLRAGALIGIIVSFIVLLNNFYKYRTT---CSWCKYLSCL 496
>gi|239607465|gb|EEQ84452.1| rhomboid family membrane protein [Ajellomyces dermatitidis ER-3]
Length = 515
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 82/156 (52%), Gaps = 27/156 (17%)
Query: 100 QKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVY 159
+ G+LE D+ +Q +R I I+LH+G+IH+ NM++ + IG +E+ G+ R VY
Sbjct: 282 KPQGSLE-DKP-EPNQWFRFIVPIFLHSGLIHIGFNMMAQLTIGADMERTIGWWRYALVY 339
Query: 160 LLSG-FG---------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVII 194
SG FG GA LF A++ L LL L+ +++ I
Sbjct: 340 FASGIFGFILGANFAPAGIASTGASGCLFGILALAFLDLLYTWGTRPKPVTELVVMLITI 399
Query: 195 AINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
I+ +G+LP +DNF+HIGGF+ G +LG +L P
Sbjct: 400 GISFVLGLLPGLDNFSHIGGFLVGLVLGISVLRSPD 435
>gi|290991574|ref|XP_002678410.1| predicted protein [Naegleria gruberi]
gi|284092022|gb|EFC45666.1| predicted protein [Naegleria gruberi]
Length = 365
Score = 75.5 bits (184), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/251 (28%), Positives = 120/251 (47%), Gaps = 52/251 (20%)
Query: 84 EPLKENPLFGPSSSTLQKLGALEWDRVVHE-HQGWRLITCIWLHAGVIHLLANMLSLVFI 142
+PL NP+ GP + K GA + D + + Q WR + +++H V+ LL N++ L+
Sbjct: 133 DPLN-NPMIGPKEEIVIKFGAKKNDLMKSDGTQFWRFLVFMFIHQSVLILLFNLMWLLTT 191
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGAYYL-LFLFNAVS------LLVLLAAAL-------- 187
++E + R+ +Y++SG GG +F F+ +S ++ +++A+L
Sbjct: 192 VRKIEGVWTAPRMFIIYMISGIGGGLLSSVFSFDLISTGSTSCIVGIISASLSELILNWD 251
Query: 188 ---------LTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
++++ + I +G+LP VD FAHIGGF+ GFL G +L R Q E+
Sbjct: 252 VVFNPFKSLFSVIMQLLIFFVIGLLPTVDQFAHIGGFVCGFLTGIMLCARKQKPELEKKW 311
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTV------GLVMLFRGENGNDHCSWCHYLS 292
+ + SR VA VLLI+ F + GL+ L +C C++L
Sbjct: 312 VKFTV-IASRA---------VAAVLLIIYFAIFFPVFYGLIPL--------NCPGCYWLD 353
Query: 293 CVPTSKWKCGN 303
PT K G+
Sbjct: 354 --PTWKMYFGD 362
>gi|149239566|ref|XP_001525659.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146451152|gb|EDK45408.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 797
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 102/236 (43%), Gaps = 50/236 (21%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
+Q +R+ I+LHAG +H+ N+L + +G +E+ G ++ +Y++SG G
Sbjct: 408 NQWYRIFIPIFLHAGFLHIFFNLLLQLTMGASIERNIGILKYALIYIMSGIAGFLLGANF 467
Query: 167 -------------------AYYLLFLFNAVSLLVLLAAALLTLVVI-----IAINLAVGI 202
+LF++ + L + I I+ +G+
Sbjct: 468 TPQGIASTGASGALFGVVATNIILFIYTGRKNTNMYGTKHYKLFIFFMFCEIVISFVLGL 527
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE-----RHQLPAQARVKSRHNP---YQY 254
LP +DNF+H+GGF G L +LL P + + + R + + NP Y+
Sbjct: 528 LPGLDNFSHLGGFAMGILSAILLLKDPFWIYNDGIITYRRDPTTWQQFVNNWNPLFAYED 587
Query: 255 VLC----------IVALVLLIVGFTVGLVMLFRGE-NGNDHCSWCHYLSCVPTSKW 299
+ +VALVL+IV F + F + + +++C WC Y +C+P W
Sbjct: 588 KIPLRFLIWVGVRVVALVLIIVYFVLLAKNFFNNDYDLSENCKWCKYFNCIPVKGW 643
>gi|225682090|gb|EEH20374.1| rhomboid family membrane protein [Paracoccidioides brasiliensis
Pb03]
Length = 735
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 87/198 (43%), Gaps = 44/198 (22%)
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
P P+ S QK +W +R I ++LHAG++H+ NM++ + IG +E+
Sbjct: 517 PDPKPNGSIKQKPEPNQW---------FRFIVPMFLHAGLVHIGFNMMAQLTIGADMERT 567
Query: 150 FGFVRVGFVYLLSGFGG-------------------------AYYLLFLFNAVSLLVLLA 184
G+ R VY SG G A L LF
Sbjct: 568 IGWWRYAIVYFASGIFGFILGANFAASGIASTGASGCLSGILALACLDLFYTWGSRPKPV 627
Query: 185 AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
L+ +++ IAI+ +G+LP +DNF+HIGGF+ G +LG LL P R
Sbjct: 628 TELIIMLITIAISFVLGLLPGLDNFSHIGGFLVGLVLGISLLRSPD----------RLRR 677
Query: 245 VKSRHNPYQYVLCIVALV 262
+ + +PY+ V+ ALV
Sbjct: 678 IGASGDPYEPVVASGALV 695
>gi|167525860|ref|XP_001747264.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774099|gb|EDQ87731.1| predicted protein [Monosiga brevicollis MX1]
Length = 511
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 97/207 (46%), Gaps = 44/207 (21%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
Q +RLIT + L G I+LLA ++ ++I + +EQ G+ R G + L SG GG
Sbjct: 308 DQWYRLITTLVLPPGTIYLLAVLVGQLYISVPIEQSIGWKRFGVLALSSGVGGYIISGIF 367
Query: 167 ------------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDN 208
A Y+ LF + ++ A LL LV+I A+ AVG L ++DN
Sbjct: 368 VPYEIKSGISPVLYGCLGALYIE-LFQSWKRVLRPARYLLWLVLITALAFAVGTLKYIDN 426
Query: 209 FAHIGGFMAGFLLGFVLLLRPQFG-WAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
F H+GGF+ G + ++L F W +V+ R ++ IVA +L +
Sbjct: 427 FGHVGGFVFGVVTALIVLPWETFSNW---------DKVRKR------LIAIVAAGVLALM 471
Query: 268 FTVGLVMLFRGENGNDHCSWCHYLSCV 294
F MLF GE + C C+ +C+
Sbjct: 472 FITSATMLFTGEAPD--CEACYAFNCI 496
>gi|393248033|gb|EJD55540.1| rhomboid-domain-containing protein [Auricularia delicata TFB-10046
SS5]
Length = 325
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 100/209 (47%), Gaps = 39/209 (18%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFG---FVRVGFVYLLSGFGGAYYL 170
Q +R IT I+LHAG+IH+L NM + + ++E++ G FV + F + G GA +
Sbjct: 125 DQWFRFITPIFLHAGIIHILLNMFAQFMLAAQIEREMGSGGFVLLYFAAGIFGCLGANFA 184
Query: 171 LF----------LFNAVSLL-VLLAA----------ALLTLVVIIAINLAVGILPHVDNF 209
L +F +++L V L A L+ L++ + I + +G +P VDNF
Sbjct: 185 LIGSPSVGASGAIFGTIAVLWVDLFAHWQFEQQPKKKLVFLLIDLLIGIGLGYIPGVDNF 244
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
AH+GGF G L + LP + + RH + L I+ + + ++ F
Sbjct: 245 AHLGGFFMGLLFAIIF-------------LPVISTTR-RHKTIFWFLRIITIPIAVIMFV 290
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
+ L+ F + CS C YLSC PT+
Sbjct: 291 I-LIRNFYTGDPYSACSGCRYLSCFPTAS 318
>gi|358374890|dbj|GAA91478.1| rhomboid family membrane protein [Aspergillus kawachii IFO 4308]
Length = 516
Score = 75.1 bits (183), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 112/267 (41%), Gaps = 77/267 (28%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I +++H G IH+ N++ + +G+ +E+ G+ R VY+ SG
Sbjct: 237 DDTPAPNQWFRFIIPMFIHTGFIHIGFNLIVQLTMGVDMERMIGWWRYFLVYVASGIWGF 296
Query: 164 -FGGAYY-----------LLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GG Y LF A+ +L LL L+ +++ IA++ +G+
Sbjct: 297 VLGGNYAGQGEASCGCSGALFGILALFILDLLYTWKDRASPWVELIIMILGIAVSFVLGL 356
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAE---------------------- 235
LP +DNFAHIGGF+ G LG LL LR + G A
Sbjct: 357 LPGLDNFAHIGGFIMGLALGLCLLRSPNALRERIGLARNPYVAMSGGAGTPTPDDNQKVN 416
Query: 236 -----------RHQLPAQARVKSRHNPYQY------------VLCIVALVLLIVGFTVGL 272
R ++ NP + ++ ALV ++VGF + +
Sbjct: 417 TGPSLVDFLKGRRTRTGAGASNNKWNPVNFFRGRKPLWWAWWLVRAGALVAVLVGFILLI 476
Query: 273 VMLFRGENGNDHCSWCHYLSCVPTSKW 299
V ++ N CSWC+ LSC+P + W
Sbjct: 477 VDFYKYPKSN--CSWCYRLSCLPVNGW 501
>gi|359414482|ref|ZP_09206947.1| Rhomboid family protein [Clostridium sp. DL-VIII]
gi|357173366|gb|EHJ01541.1| Rhomboid family protein [Clostridium sp. DL-VIII]
Length = 332
Score = 74.7 bits (182), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 92/165 (55%), Gaps = 26/165 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+F + L GA + + ++ + WRL+TC +LH+G+IH++ NM SL IG ++EQ +
Sbjct: 165 IFDIDTRVLIYFGA-KINILIDHGEIWRLLTCAFLHSGLIHIVCNMYSLYIIGPQIEQIY 223
Query: 151 GFVRVGFVYLLSGFGGAYYLLFLF-NAVS----------LLVLLAAALL----------- 188
G + +YL+S + FL N ++ + LLA AL+
Sbjct: 224 GIRKYLIIYLISCITASISSYFLNPNGIAIGASGGIFGLMGALLAFALIERNRIQKKFLS 283
Query: 189 TLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFV--LLLRPQ 230
+L+ IIAINL +G+ + ++DNFAHIGG + G + G++ +L+R +
Sbjct: 284 SLLQIIAINLFIGLSIKNIDNFAHIGGLVGGIVSGYISYILVRKR 328
>gi|449275966|gb|EMC84691.1| Rhomboid family member 1 [Columba livia]
Length = 774
Score = 74.3 bits (181), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL ++LHAG++H L ++ + I LE+ G+ R+ +YLLSG G
Sbjct: 571 QFYRLWLSLFLHAGILHCLVSICFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 630
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 631 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 690
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG + + Y+ I+ L+ +
Sbjct: 691 HISGFISGFFLSFAFLPYISFG---------------KFDLYRKRCQIIIFQLIFIALFS 735
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC +L+C+P + C
Sbjct: 736 GLVILFYFYPIK--CEWCEFLTCIPFTDKFC 764
>gi|406862658|gb|EKD15708.1| rhomboid family protein [Marssonina brunnea f. sp. 'multigermtubi'
MB_m1]
Length = 570
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 86/297 (28%), Positives = 124/297 (41%), Gaps = 66/297 (22%)
Query: 62 CPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGW-RLI 120
CP + C L P +NP++ P S+T AL + + ++ W R I
Sbjct: 250 CPDTTSNDEQDCTLAQLCGFGM-PDSQNPVY-PGSTT----DAL--NEIANQPNQWFRFI 301
Query: 121 TCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG-------------- 165
I+LHAG+IH+ NML + +G +E G +R VY SG FG
Sbjct: 302 VPIFLHAGLIHIGFNMLLQLTLGKDMEIAIGPIRYFLVYFSSGIFGFVLGGNFAAVGIAS 361
Query: 166 -GAYYLLFLFNAVSLLVLLAA-----------ALLTLVVIIAINLAVGILPHVDNFAHIG 213
GA LF A++LL LL A + L +I+ L G+LP +DNF+HIG
Sbjct: 362 TGASGALFGVIALNLLDLLYTWSERRSPWKDFAFIMLDCVISFGL--GLLPGLDNFSHIG 419
Query: 214 GFMAGFLLGFVLL-----LRPQFGWAERHQLPAQARV---------------------KS 247
GF+ G LG +L LR + G + + A + K
Sbjct: 420 GFLMGLALGICILHSPNALRKRIGQDDPPYVVAPIKAGDGAIPTASMTGFLKNPVGFFKG 479
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW-KCGN 303
R P +V V L+ V +++L CSWC YLSC+ + W + GN
Sbjct: 480 R-KPVWWVWWFVRAGSLVFVLVVFILLLRNFYTDRKTCSWCKYLSCINVNDWCEVGN 535
>gi|340370736|ref|XP_003383902.1| PREDICTED: inactive rhomboid protein 1-like [Amphimedon
queenslandica]
Length = 399
Score = 73.9 bits (180), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 107/213 (50%), Gaps = 39/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q WRL+ +++H GVI ++ + +++GI++E+ GF+R+ +Y +SG GG A ++
Sbjct: 190 QTWRLVLSLFIHLGVIDVIVIGIIQLYLGIKIERTAGFLRIALIYFISGIGGNLVSAIFI 249
Query: 171 LF---------LFNAVSLLV--------LLAAA---LLTLVVIIAINLAVGILPHVDNFA 210
+ +F S+L+ ++ A LL L+ I+ + LA+G LP +DN A
Sbjct: 250 PYQVTGGASAAVFGLASVLIVELFQVWQIIDKAWLELLKLLSIMLVLLAIGTLPFIDNLA 309
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
+IGG + G + L FG +V + ++C+ +LLI+
Sbjct: 310 NIGGIIFGVPAAIIFLPYITFG-----------KVDAWRKRILLIICVP--LLLIMFLVC 356
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L+ F G+ D CS+CHY +C+P + C N
Sbjct: 357 FLLFFFLGD--PDFCSFCHYFNCIPYTSTFCNN 387
>gi|242817342|ref|XP_002486936.1| rhomboid family membrane protein [Talaromyces stipitatus ATCC
10500]
gi|218713401|gb|EED12825.1| rhomboid family membrane protein [Talaromyces stipitatus ATCC
10500]
Length = 526
Score = 73.9 bits (180), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/257 (24%), Positives = 105/257 (40%), Gaps = 71/257 (27%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-----FGG 166
+Q +R I ++LHAG++H+ NML + +G +E++ G+ R VY SG GG
Sbjct: 257 EPNQWFRFIVPMFLHAGLVHIGFNMLMQMTVGADMERRIGWWRYALVYFSSGIFGFVMGG 316
Query: 167 AYYLLFLFNAVSLLVLLAA--------------------ALLTLVVIIAINLAVGILPHV 206
Y + + + L L+ L++ IA++ +G+LP +
Sbjct: 317 NYAAQGISSTGASGALFGLVALTLLDLLYTWGERRSPWVELIFLIIEIAVSFVLGLLPGL 376
Query: 207 DNFAHIGGFMAGFLLGFVLLLRPQF-----GWAER------------------------- 236
DNF+HIGGF+ G +G ++ P + G R
Sbjct: 377 DNFSHIGGFIMGLAMGLCMMRSPNYIRERIGLQRRPYVVMSGGAGPTPGDGDNNSNTINS 436
Query: 237 ----HQLPAQARVKSR-------HNPYQYVLCIV---ALVLLIVGFTVGLVMLFRGENGN 282
+ P+++ R P + +V ALV +I+GF + ++
Sbjct: 437 NNIDNNKPSRSVATGRLVGFFRGRKPLWWAWWLVRAGALVAVIIGFIFLVTDFYKYPKST 496
Query: 283 DHCSWCHYLSCVPTSKW 299
CSWC+ LSC+P W
Sbjct: 497 --CSWCYRLSCLPIKNW 511
>gi|331268929|ref|YP_004395421.1| rhomboid family membrane protein [Clostridium botulinum BKT015925]
gi|329125479|gb|AEB75424.1| rhomboid family membrane protein [Clostridium botulinum BKT015925]
Length = 335
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 79/146 (54%), Gaps = 23/146 (15%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
LGA E + ++ Q +RLITC++LH G++HL+ NM +L +G +E+ +G ++ +YL+
Sbjct: 184 LGAKE-NTLIASGQYYRLITCMFLHGGLMHLILNMYALKALGPMIEKSYGKMKYVIIYLV 242
Query: 162 SGFGGAYYLLFLFNAVS------LLVLLAAALL---------------TLVVIIAINLAV 200
G + N VS + LL A L+ +V +I IN+ +
Sbjct: 243 GGLISSISSYIFSNGVSIGASGAIFSLLGAILVLTIKMRSVAGKDVIKNVVSVIVINIFI 302
Query: 201 GI-LPHVDNFAHIGGFMAGFLLGFVL 225
G+ +P++DNFAHIGG + G L +L
Sbjct: 303 GLAIPNIDNFAHIGGLLGGVFLSIIL 328
>gi|123485562|ref|XP_001324518.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121907402|gb|EAY12295.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 443
Score = 73.6 bits (179), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 111/246 (45%), Gaps = 45/246 (18%)
Query: 84 EPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIG 143
+ + NPL GPSS + LGA ++ + + + WR IT I+LH G++ L+ + L+F+
Sbjct: 202 DSMNSNPLIGPSSDNVVILGA-KYGPSILDGEIWRFITAIFLHLGLVQLVFSE-GLLFVT 259
Query: 144 IRLEQQFGFVRVGFVYLLSG-FGGAYYLLFLFNAVS---------LLVLLAAALLT---- 189
+ +E G+ R F++ ++G +G LF N + L++++ L+T
Sbjct: 260 LPVEIDGGYWRCFFIFFIAGTYGWILSSLFSPNMIGAGTSGAVLGLMMVMMCDLITSWKT 319
Query: 190 ----------LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER--H 237
++V IA + G+LP +DNF+HIGG + G L ++L A H
Sbjct: 320 AEKKGFKLGKMIVCIAACIIFGLLPFMDNFSHIGGIIVGILCSIMILPNMTMSRASTICH 379
Query: 238 QLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDH-CSWCHYLSCVPT 296
L A +A +L + ++ LV +R + C C ++C+
Sbjct: 380 GLTA----------------FLAFPILTIIYSATLVGFYRAADTTTGLCPACRVINCINI 423
Query: 297 SKWKCG 302
W G
Sbjct: 424 KNWCTG 429
>gi|290982897|ref|XP_002674166.1| predicted protein [Naegleria gruberi]
gi|284087754|gb|EFC41422.1| predicted protein [Naegleria gruberi]
Length = 424
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 81/163 (49%), Gaps = 26/163 (15%)
Query: 87 KENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
NP GPSSSTL LGA ++ E+Q WRL T + +HAG +HL N+ V I +
Sbjct: 218 SSNPSIGPSSSTLLLLGAKSAYKIKKEYQLWRLFTPLIMHAGFLHLFMNLFVQVMICMGY 277
Query: 147 EQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLAAALLTLVV------- 192
E+ + + RV +Y+++G GG + L ++VS ++ L+ A + +++
Sbjct: 278 EKTWKWYRVLPIYIIAGVGGNLLSCVALPDSVSVGASGAIMGLIGAKVANIIIRWKKIPT 337
Query: 193 ------------IIAINLAVGILPHVDNFAHIGGFMAGFLLGF 223
II I L +VD H+GG M GF++GF
Sbjct: 338 QPKIMQCISVGFIIVITLLWSFSDYVDYAGHLGGLMCGFIIGF 380
>gi|402298353|ref|ZP_10818053.1| rhomboid protein membrane-associated serine peptidase [Bacillus
alcalophilus ATCC 27647]
gi|401726454|gb|EJS99682.1| rhomboid protein membrane-associated serine peptidase [Bacillus
alcalophilus ATCC 27647]
Length = 519
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 25/164 (15%)
Query: 91 LFGPSSS--TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
L+G S S TL ++GA ++ ++ + + WR+IT +++H G +HLL N L+L F+G +E+
Sbjct: 208 LYGDSESILTLVEVGA-KYSPLILDGEWWRIITSMFIHIGFLHLLMNSLALYFLGTLVER 266
Query: 149 QFGFVRVGFVYLLSGF--------------GGAYYLLF-LFNAVSLLVLLAAALL----- 188
+G R F+Y +G GA +F LF A+ L L
Sbjct: 267 IYGSFRFVFIYFTAGVIGTLVSFWMNLSIGAGASGAIFGLFGALLYFGLNYRKLFFRTMG 326
Query: 189 -TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
+++++AINLA G L P VDN AH+GG + GFL +V+ L Q
Sbjct: 327 ANVLIVLAINLAFGFLIPVVDNSAHVGGLIGGFLAAYVIQLPKQ 370
>gi|358055893|dbj|GAA98238.1| hypothetical protein E5Q_04921 [Mixia osmundae IAM 14324]
Length = 1646
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 40/209 (19%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-----FGGAY 168
+QG+R + I++HAG++H+ N+L V +E+Q G +R +Y +G GG +
Sbjct: 1409 NQGFRFVLPIFVHAGLVHIALNLLVQVTSSAEVERQMGSLRFFLLYFPAGIFGFILGGNF 1468
Query: 169 YLLFLFNA----------VSLLVLLAA----------ALLTLVVIIAINLAVGILPHVDN 208
L+ L + S+ V L A L L++ I + +G +P VDN
Sbjct: 1469 ALVGLPSVGASGAIYGTHASVFVDLVAHWRLEPSPRKKLFFLLIEIILGFGLGYVPGVDN 1528
Query: 209 FAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGF 268
F+HIGGF G L +LL P +R ++ Y L ++ +++ F
Sbjct: 1529 FSHIGGFAMG--LTCSILLYPVIHHTKRRRV------------ILYTLRAISAPGIVLMF 1574
Query: 269 TVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
+ L+ F + N+ C +C Y+SC PT+
Sbjct: 1575 VL-LIRNFYTVDPNNACEFCKYISCWPTT 1602
>gi|358055892|dbj|GAA98237.1| hypothetical protein E5Q_04920 [Mixia osmundae IAM 14324]
Length = 1648
Score = 73.6 bits (179), Expect = 1e-10, Method: Composition-based stats.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 40/209 (19%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-----FGGAY 168
+QG+R + I++HAG++H+ N+L V +E+Q G +R +Y +G GG +
Sbjct: 1411 NQGFRFVLPIFVHAGLVHIALNLLVQVTSSAEVERQMGSLRFFLLYFPAGIFGFILGGNF 1470
Query: 169 YLLFLFNA----------VSLLVLLAA----------ALLTLVVIIAINLAVGILPHVDN 208
L+ L + S+ V L A L L++ I + +G +P VDN
Sbjct: 1471 ALVGLPSVGASGAIYGTHASVFVDLVAHWRLEPSPRKKLFFLLIEIILGFGLGYVPGVDN 1530
Query: 209 FAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGF 268
F+HIGGF G L +LL P +R ++ Y L ++ +++ F
Sbjct: 1531 FSHIGGFAMG--LTCSILLYPVIHHTKRRRV------------ILYTLRAISAPGIVLMF 1576
Query: 269 TVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
+ L+ F + N+ C +C Y+SC PT+
Sbjct: 1577 VL-LIRNFYTVDPNNACEFCKYISCWPTT 1604
>gi|351711230|gb|EHB14149.1| Rhomboid family member 1 [Heterocephalus glaber]
Length = 857
Score = 73.6 bits (179), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 94/212 (44%), Gaps = 42/212 (19%)
Query: 115 QGWRLITCIWLHAG-VIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYY 169
Q +RL ++LHAG ++H L ++ + + LE+ G+ R+ +YLLSG G A +
Sbjct: 653 QFYRLWLSLFLHAGQILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIF 712
Query: 170 LLF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNF 209
L + LF + +L A L+ ++ A G+LP +DNF
Sbjct: 713 LPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNF 772
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
AHI GF++G L F L FG + + Y+ I+ + +G
Sbjct: 773 AHISGFISGLFLSFAFLPYISFG---------------KFDLYRKRCQIIIFQAVFLGLL 817
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC +L+C+P + C
Sbjct: 818 AGLVILFYFYPVR--CEWCEFLTCIPFTDKFC 847
>gi|164662841|ref|XP_001732542.1| hypothetical protein MGL_0317 [Malassezia globosa CBS 7966]
gi|159106445|gb|EDP45328.1| hypothetical protein MGL_0317 [Malassezia globosa CBS 7966]
Length = 326
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 109/246 (44%), Gaps = 50/246 (20%)
Query: 85 PLKENPLFGPSSSTLQKLGALEWDRVVH---------EHQGWRLITCIWLHAGVIHLLAN 135
P P S+S+ QK + + H QG+R ++ I++HAG++H+L N
Sbjct: 28 PTNMIPCLKESTSSQQKFMKDQMCSLAHICGLDDPKNPDQGYRFVSAIFVHAGIVHILFN 87
Query: 136 MLSLVFIGIRLEQQFGFVRVGFVYLLS-------------------GFGGAYYLLFLFNA 176
++ L+ + ++E+ G + V++ G GA Y F
Sbjct: 88 LIVLLTLCCQIEKLIGTIAYAIVFMAGGIGGNLLGGNFGLIGQPALGASGAVYTCISFEM 147
Query: 177 VSLLV-----LLAAALLTLVVIIAI-NLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
+ L+ + LT+ +I A+ LA+G+LP +DNF+HIGGF G L G V P
Sbjct: 148 IDLIYNWKYEIKPKTRLTVSIIFAVLGLALGLLPGLDNFSHIGGFCVGILGGMV--FAPS 205
Query: 231 FGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVM-LFRGENGNDHCSWCH 289
+ H + LC + + L++ F V LV+ +R ++ C WC
Sbjct: 206 IHSTKTHM-------------FINWLCRLIGMGLLIAFIVALVLNFYRNDDPATACKWCR 252
Query: 290 YLSCVP 295
YLSC+P
Sbjct: 253 YLSCLP 258
>gi|319651546|ref|ZP_08005673.1| hypothetical protein HMPREF1013_02285 [Bacillus sp. 2_A_57_CT2]
gi|317396613|gb|EFV77324.1| hypothetical protein HMPREF1013_02285 [Bacillus sp. 2_A_57_CT2]
Length = 506
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 80/148 (54%), Gaps = 23/148 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+STL K GA +++ ++ + + WR +T I LH G++HLL N L+L ++G +E+ +G +R
Sbjct: 204 DTSTLIKYGA-KFNPLILDGEWWRFLTPIVLHIGLLHLLMNTLALFYLGSAVERVYGNLR 262
Query: 155 VGFVYLLSGFGGAYYLLFL---------------FNAVSLLVLLAAAL------LTLVVI 193
F+YL +GFGG F A+ L+ +L ++V+
Sbjct: 263 FLFIYLAAGFGGTLASFIFSPTLSAGASGAIFGCFGALLYFGLIYPSLFFRTIGFNIIVV 322
Query: 194 IAINLAVG-ILPHVDNFAHIGGFMAGFL 220
+ INLA G +P +DN HIGG + GFL
Sbjct: 323 LGINLAFGFTIPGIDNAGHIGGLIGGFL 350
>gi|335041089|ref|ZP_08534206.1| Rhomboid family protein [Caldalkalibacillus thermarum TA2.A1]
gi|334179066|gb|EGL81714.1| Rhomboid family protein [Caldalkalibacillus thermarum TA2.A1]
Length = 577
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 23/164 (14%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
TL GA +W+ ++ E + WRL+T ++LH G+ HL+ N L+L F+G +E+ FG R
Sbjct: 229 DPQTLITYGA-KWNPLIIEGEYWRLVTPMFLHIGIWHLMFNSLALYFLGGAVERIFGSFR 287
Query: 155 VGFVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVI 193
++Y+ +G G + L F + + ++ I
Sbjct: 288 FLWIYMFAGISGTLASFAFTPNLAAGASGAIFGCFGALLYFGLKRRNLFFRTIGMDIIFI 347
Query: 194 IAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
+ NLA+G I+P +DN+ HIGG + GFL ++ L + W ER
Sbjct: 348 LIFNLAIGFIIPMIDNYGHIGGLIGGFLAAAMVNLPGERQWKER 391
>gi|170083865|ref|XP_001873156.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650708|gb|EDR14948.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 332
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/213 (30%), Positives = 101/213 (47%), Gaps = 43/213 (20%)
Query: 113 EHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------ 165
+Q +R +T I+LHAG+IH+L NML+ + + ++E++ G Y +G FG
Sbjct: 128 PNQWFRFVTPIFLHAGIIHILLNMLAQITLSAQIEKEMGSGGFLLTYFAAGIFGNVLGGN 187
Query: 166 ---------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILP--- 204
GA +F AV+ + L A L+ + + + I +AVG +P
Sbjct: 188 FSLVGVPSLGASGAIFGTIAVTWVDLFAHWKYHYRPVRKLIFMTIELLIGIAVGYIPCES 247
Query: 205 HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLL 264
+D +HIGGF+ G L+G L P ++RH+L ++ + A+ L
Sbjct: 248 FIDKLSHIGGFVMGLLVGTTLY--PVISASKRHKL------------IMWIFRLAAIPLA 293
Query: 265 IVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
I+ F V LV F + CS C YLSC PTS
Sbjct: 294 ILLFVV-LVRNFYTSDPYAACSGCRYLSCFPTS 325
>gi|409051774|gb|EKM61250.1| hypothetical protein PHACADRAFT_134676 [Phanerochaete carnosa
HHB-10118-sp]
Length = 458
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 100/205 (48%), Gaps = 40/205 (19%)
Query: 119 LITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------------ 165
IT I++HAG+IH+L NML+ + +E++ G +Y +G FG
Sbjct: 251 FITPIFIHAGIIHILLNMLAQLTASAEVEKEMGSAGFLILYFAAGIFGNVLGGNFALVAA 310
Query: 166 ---GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHVDNFAHIG 213
GA +F AV+ + L+A L+ ++V + I +A+G +P+VDNFAHIG
Sbjct: 311 PSVGASGAIFGTVAVAWVDLIAHWKYQYRPVRKLMFMIVELVIGIAIGYIPYVDNFAHIG 370
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
G + G L+G VL P RH++ A ++ +A+VL +V L+
Sbjct: 371 GLLMGLLVGIVLY--PIISTTTRHKVIVWA--------FRIAAIPIAVVLFVV-----LI 415
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSK 298
F + CSWC YLSC PTS
Sbjct: 416 RNFYTSDPYAACSWCRYLSCFPTSS 440
>gi|307171848|gb|EFN63503.1| Rhomboid family member 1 [Camponotus floridanus]
Length = 925
Score = 72.8 bits (177), Expect = 2e-10, Method: Composition-based stats.
Identities = 62/213 (29%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS------------ 162
Q +RL T I+LHAG++HL+ +L F+ LE+ G +R+ +Y +
Sbjct: 718 QFYRLFTTIFLHAGIVHLVITLLIQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 777
Query: 163 ------GFGGAYYLLFLFNAVSLLVLLAA------ALLTLVVIIAINLAVGILPHVDNFA 210
G GA++ L V +L AL L++I+ L +GILP VDN+A
Sbjct: 778 PYRAEVGPAGAHFALLATLVVEVLHCWPMLKHPRRALSKLILILVGLLMLGILPWVDNYA 837
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ GF+ GFL + L+ FG +R + +L I ++LIVG
Sbjct: 838 HLFGFIFGFLAAYALMPFISFGHYDRR---------------RKILLIWVCLILIVGLFA 882
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L+ LF + C C +CVP ++ C +
Sbjct: 883 LLLALFYNVPVYE-CEVCKLFNCVPFTRDFCAS 914
>gi|171692185|ref|XP_001911017.1| hypothetical protein [Podospora anserina S mat+]
gi|170946041|emb|CAP72842.1| unnamed protein product [Podospora anserina S mat+]
Length = 523
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 100/254 (39%), Gaps = 66/254 (25%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
G + + +Q +R I I+LHAG+IH+ NML + +G +E+ G +R VY+ +
Sbjct: 241 GVQQPGQPPEPNQWFRFIVPIFLHAGLIHIGFNMLLQLTLGRDMEKHIGSIRFFIVYMSA 300
Query: 163 G-FG---------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAIN 197
G FG GA LF A++ L LL L+ L + I I+
Sbjct: 301 GIFGFVMGGNFAATGIASTGASGSLFGIIALTFLDLLYSWKDRVNPTKDLMYLFIDIIIS 360
Query: 198 LAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
+G+LP +DNF+HIGGF+ G LG +L P + R+ PY
Sbjct: 361 FVLGLLPGLDNFSHIGGFLMGLALGICILHSPNS---------LRRRIGESEVPYANSQV 411
Query: 258 IVALVL--LIVGFTVGLVMLFRGENG------------------------------NDHC 285
+ + F V F+G + C
Sbjct: 412 SSGFLKEGTVPPFFKNPVGFFKGRKPLWWGWWLIRVGALILVLVVFVLLLNNFYIHHKVC 471
Query: 286 SWCHYLSCVPTSKW 299
WC YLSC+P + W
Sbjct: 472 GWCKYLSCLPVNNW 485
>gi|295425277|ref|ZP_06817980.1| rhomboid protease GluP [Lactobacillus amylolyticus DSM 11664]
gi|295065053|gb|EFG55958.1| rhomboid protease GluP [Lactobacillus amylolyticus DSM 11664]
Length = 226
Score = 72.8 bits (177), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/174 (35%), Positives = 90/174 (51%), Gaps = 32/174 (18%)
Query: 73 CVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHL 132
C+A FL +F EN ++TL KLGA+ VV HQ WRLIT +LH G+ HL
Sbjct: 20 CIAMFLVE-TFMGGSEN------TATLVKLGAMNNYAVVAGHQWWRLITAQFLHIGIWHL 72
Query: 133 LANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-----------------AYYLLFLFN 175
++N++ + ++G+ +E G R +YLLSG GG + L LF
Sbjct: 73 VSNIVMIYYMGLIIEPMLGHWRFLLIYLLSGVGGNLLSLAFGSDKSIGAGASTALFGLFG 132
Query: 176 AVSLLVL-------LAAALLTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLL 221
AV L + +A +V+ +NL + I LP++D + HIGG ++GFLL
Sbjct: 133 AVIALGIRHRANPVVAYVGRQALVLAVLNLIIDIFLPNIDIYGHIGGLISGFLL 186
>gi|340904956|gb|EGS17324.1| hypothetical protein CTHT_0066450 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 496
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 111/255 (43%), Gaps = 58/255 (22%)
Query: 88 ENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
P + P +S K +W +R I I++HAGVIH+ N+L + +G +E
Sbjct: 249 PEPKYAPGASMDDKPEPNQW---------FRFIIPIFMHAGVIHIGFNLLLQLTLGRDME 299
Query: 148 QQFGFVRVGFVYLLSG-FG---------------GAYYLLFLFNAVSLLVLLAA------ 185
+ G +R VY+ SG FG GA LF A++LL L +
Sbjct: 300 RSIGSIRFFLVYMCSGIFGFVMGGNFAATGIASTGASGSLFGIIALTLLDLFYSWKDRMN 359
Query: 186 ---ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRP------------- 229
L +++ + I+ +G+LP +DNF+HIGGF+ G LG +L P
Sbjct: 360 PVKDLSYILLNVIISFVLGLLPGLDNFSHIGGFLMGLALGICVLHSPNSLRRRIGGDVPY 419
Query: 230 -----QFGWAERHQLPAQAR-----VKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGE 279
G+A + P+ + K R P + ++ LI+ V ++ML
Sbjct: 420 ASSHVSSGYASQGTPPSFFKNPVGFFKGR-KPLWWAWWLIRAGALILVLVVFILMLNNFY 478
Query: 280 NGNDHCSWCHYLSCV 294
+ CSWC YLSC+
Sbjct: 479 VYHTKCSWCKYLSCM 493
>gi|331217798|ref|XP_003321577.1| hypothetical protein PGTG_03114 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309300567|gb|EFP77158.1| hypothetical protein PGTG_03114 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 468
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 66/215 (30%), Positives = 97/215 (45%), Gaps = 46/215 (21%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG----- 165
Q +R + ++LHAG+IH L N+ + +E+Q G +R +YL SG FG
Sbjct: 216 QPDQKFRFVLPLFLHAGLIHYLLNIAVQMTSSALIERQMGSLRFILLYLPSGIFGFILGG 275
Query: 166 ----------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHV 206
GA +F A L+ L+A L+ LV I L +G++P +
Sbjct: 276 NFSLVGQPSVGASGAIFSTYAAVLVDLIAHWSIEYRPTRKLVFLVFEIVAGLLLGLIPGI 335
Query: 207 DNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIV 266
DNF+HIGGF G LL +L + HQ H Y + ++ L+ I+
Sbjct: 336 DNFSHIGGFSMGILLAILL-------FPVLHQ-------TITHRWTFYTVRVIGLIGAIL 381
Query: 267 GFTVGLVMLFRG---ENGNDHCSWCHYLSCVPTSK 298
F V+L+R E+ C WC YLSC PT+
Sbjct: 382 MF----VLLYRNFFTEDPAASCDWCRYLSCWPTAS 412
>gi|299470381|emb|CBN78430.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 403
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 77/171 (45%), Gaps = 29/171 (16%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIR 145
+ NPL GPS TL LGA ++ E Q WRL+T I LH GV+H+ N+ S +G
Sbjct: 201 VDSNPLLGPSIETLMALGAKHLT-LIQEGQVWRLLTPILLHGGVLHIFMNLTSQFRMGTF 259
Query: 146 LEQQFGFVRVGFVYLLSGFGGA---------------------------YYLLFLFNAVS 178
LE+++G VY + G GG ++L +N
Sbjct: 260 LEERWGTRNWLIVYWVGGLGGNLLSCVASPDKVGVGASGAIYAIMGAWLSHVLCTWNEED 319
Query: 179 LLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRP 229
A L +V+ + +A + P VD AH+GG + G L+G+ L +P
Sbjct: 320 EFA-KGAQLTQVVLYTMVGMAASLAPIVDWAAHVGGLVTGILVGWALFHKP 369
>gi|403331813|gb|EJY64875.1| hypothetical protein OXYTRI_14975 [Oxytricha trifallax]
Length = 319
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 50/82 (60%)
Query: 85 PLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGI 144
PL + GPS TL + G+ R+ ++ Q WR T I+LHAG +H+ +NMLS + IG
Sbjct: 100 PLDNDNFLGPSVITLNQFGSNNPFRMRYDIQLWRFFTPIFLHAGFMHIFSNMLSQMIIGF 159
Query: 145 RLEQQFGFVRVGFVYLLSGFGG 166
LE G RVG +YL+SG GG
Sbjct: 160 MLESIMGPFRVGLLYLVSGIGG 181
>gi|433462194|ref|ZP_20419783.1| S54 family peptidase [Halobacillus sp. BAB-2008]
gi|432189083|gb|ELK46216.1| S54 family peptidase [Halobacillus sp. BAB-2008]
Length = 510
Score = 72.0 bits (175), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/170 (32%), Positives = 86/170 (50%), Gaps = 35/170 (20%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
TL + GA +++ + E + WRL+T ++LH G+IHL+ NML+L +IG +E+ +G R
Sbjct: 208 ETLIEYGA-KFNPAIMEGEWWRLVTSMFLHIGLIHLMMNMLALYYIGTAVERIYGSWRYI 266
Query: 157 FVYLLSGFGGAYYLLFLFNAVS-----LLVLLAAALL----------------TLVVIIA 195
+YLL+G G+ L VS + L ALL L+ II
Sbjct: 267 IIYLLAGVFGSVASFMLNPQVSAGASGAIFGLFGALLYFGVWNRRLFFQTMGWNLLFIIG 326
Query: 196 INLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+N+A G+ +P +DN AH+GG + GF+ + QLP Q R
Sbjct: 327 LNIAFGLFVPQIDNGAHMGGLIGGFIAAAI------------SQLPKQKR 364
>gi|195998740|ref|XP_002109238.1| hypothetical protein TRIADDRAFT_21455 [Trichoplax adhaerens]
gi|190587362|gb|EDV27404.1| hypothetical protein TRIADDRAFT_21455 [Trichoplax adhaerens]
Length = 547
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 94/215 (43%), Gaps = 44/215 (20%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL------------- 161
Q +R ++LHAG++HL +L + I E+ G++R+ +Y+L
Sbjct: 343 QFYRFWISLFLHAGLLHLGVTLLFNLIILKDFEKMAGWLRISIIYVLSGIGGNIISGILL 402
Query: 162 ----------SGFG-GAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
S FG A + +F + +L A+ L VI+ + G+LP+VDNF+
Sbjct: 403 PYHPEIGPSGSNFGIVACLFVEVFQSWQILKRPVRAIGKLAVIVLVLFIFGLLPYVDNFS 462
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG--F 268
H GGF+ G L F +L FG +R + Q + + + IVG F
Sbjct: 463 HFGGFIFGLFLAFAILPYVSFGKWDRRRKRLQ----------------IIISIFIVGGLF 506
Query: 269 TVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L + +RG C C YL+C+P + C N
Sbjct: 507 CAILFIFYRGRPF--ECKVCRYLNCIPFTDHFCKN 539
>gi|404370657|ref|ZP_10975977.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
gi|226913215|gb|EEH98416.1| hypothetical protein CSBG_02042 [Clostridium sp. 7_2_43FAA]
Length = 325
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 24/171 (14%)
Query: 84 EPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIG 143
E +K L TL ++GA + + +++ + +RL+T +LH G+IH+ NM +L IG
Sbjct: 153 EVIKSRNLIDIDIYTLIQMGA-KVNVLINSGEIYRLLTSAFLHGGIIHIFFNMSALNIIG 211
Query: 144 IRLEQQFGFVRVGFVYLLSGFGGAYY-LLFLFNAVS------LLVLLAAALL-------- 188
+E +G R +Y++S GG+ LF N++S + LL A L+
Sbjct: 212 REVEAVYGSKRYIAIYVISALGGSVVSYLFKPNSISVGASGAIFGLLGAMLIFGLKERDK 271
Query: 189 -------TLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
++ I +N+ +GI +P++DNFAH+GG + G + F+L + F
Sbjct: 272 IGKQYMKNILETIGLNVIIGITIPNIDNFAHLGGLILGTITSFILFKKKNF 322
>gi|449669475|ref|XP_002160443.2| PREDICTED: inactive rhomboid protein 1-like [Hydra magnipapillata]
Length = 733
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/225 (25%), Positives = 101/225 (44%), Gaps = 40/225 (17%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
G L + + Q +RL ++LHAG++HL+ ++ I +E G++R +YLLS
Sbjct: 512 GLLPFVKQDQPDQIYRLWLSLFLHAGILHLVIVLIFNFTILQDIELMAGWLRTALIYLLS 571
Query: 163 GFGGAYYLLFL-------------FNAVSLLVLLAA-----------ALLTLVVIIAINL 198
G GG+ + L F ++ L + L ++ +
Sbjct: 572 GIGGSLWSSILLPYSPEVGPSGSCFGIIACLFVEYIQSWQLYKTPWIGFFKLCGLVLVLF 631
Query: 199 AVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCI 258
+G+LP++DNFAHI GF+ GFLL + L FG +R + Q
Sbjct: 632 LIGLLPYIDNFAHIFGFVYGFLLSIIFLPYITFGDWDRRRKKIQI--------------A 677
Query: 259 VALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
VA+V+L + TVG ++ ++ + H + + +C+P + C N
Sbjct: 678 VAIVILFIITTVGFILFYKVQEF--HSAAITFFNCIPITDNFCKN 720
>gi|389627590|ref|XP_003711448.1| rhomboid family membrane protein [Magnaporthe oryzae 70-15]
gi|351643780|gb|EHA51641.1| rhomboid family membrane protein [Magnaporthe oryzae 70-15]
gi|440465662|gb|ELQ34973.1| rhomboid family membrane protein [Magnaporthe oryzae Y34]
gi|440480579|gb|ELQ61238.1| rhomboid family membrane protein [Magnaporthe oryzae P131]
Length = 558
Score = 71.6 bits (174), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 77/250 (30%), Positives = 117/250 (46%), Gaps = 57/250 (22%)
Query: 101 KLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYL 160
K G D+ +Q +R IT I++HAG+IH+ NML + +G +EQ G +R VY+
Sbjct: 283 KNGQPGPDKDNQPNQWFRFITPIFMHAGLIHIGFNMLLQLTLGREMEQAIGSIRFFLVYM 342
Query: 161 LSG-FG---------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIA 195
+G FG GA LF A++L+ LL LL + + IA
Sbjct: 343 SAGIFGFVLGGNYAGAGTPSTGASGSLFGVIALTLIDLLYSWKDRKNPVKDLLFIFLDIA 402
Query: 196 INLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQL----PAQARVKSRHN- 250
I+ +G+LP +DNF+HIGGF+ G LG LL P + R ++ P A V S +
Sbjct: 403 ISFVLGLLPGLDNFSHIGGFLMGLGLGVCLLHSPN---SLRRRIGVDAPPYASVTSGQDS 459
Query: 251 ----PYQ-----------------YVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCH 289
P+ +++ ALV++ +GF + L + + CSWC
Sbjct: 460 QTAPPFHKNPIGFFKGRKPLWWAWWLIRAGALVIVTIGFILLLNNFYV---VHQKCSWCK 516
Query: 290 YLSCVPTSKW 299
YLSC+ + W
Sbjct: 517 YLSCININNW 526
>gi|410460563|ref|ZP_11314238.1| hypothetical protein BAZO_14959 [Bacillus azotoformans LMG 9581]
gi|409926821|gb|EKN63973.1| hypothetical protein BAZO_14959 [Bacillus azotoformans LMG 9581]
Length = 507
Score = 71.6 bits (174), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 74/146 (50%), Gaps = 23/146 (15%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
STL K GA +++ + E WR IT ++LH G +HLL N L+L ++GI +E+ +G R
Sbjct: 203 STLIKFGA-KYNPAILEGDWWRFITPMFLHIGFLHLLMNTLALYYLGISVERIYGTWRFL 261
Query: 157 FVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVIIA 195
+Y +G G + L F V + L + ++V++
Sbjct: 262 ILYFAAGITGGVASFAFTTQVSAGASGAIFGCFGALLYFGVVHPSLFLRSMGWNIIVVLG 321
Query: 196 INLAVGIL-PHVDNFAHIGGFMAGFL 220
INLA G L P VDN AHIGG + GFL
Sbjct: 322 INLAFGFLVPMVDNSAHIGGLIGGFL 347
>gi|388581677|gb|EIM21984.1| rhomboid-domain-containing protein [Wallemia sebi CBS 633.66]
Length = 476
Score = 71.2 bits (173), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 65/227 (28%), Positives = 105/227 (46%), Gaps = 42/227 (18%)
Query: 94 PSSST--LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
P+S T L +L Q +R + I+LH+G++HL N+ +L+ +G E+ G
Sbjct: 256 PTSETMPLYELCGFGMSSTEEPSQSFRFVLPIFLHSGILHLCINLFALLVLGAYAERVLG 315
Query: 152 FVRVGFVYLLSG-FG---------------GAYYLLFLFNAVSLLVLL--------AAAL 187
+ V+ +G FG GA + AVSL+ LL L
Sbjct: 316 SLAFIIVFGAAGIFGNILGGNFAQVTTPSVGASGAILGLIAVSLVDLLFHWKLERRPGLL 375
Query: 188 LTLVVI-IAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVK 246
LT+ +I + + +G +P++DNFAHIGG++ G LL + P ++H++
Sbjct: 376 LTIHIIELIVMFFIGYIPNLDNFAHIGGWLQGLLLSVFFI--PVISPTKKHRI------- 426
Query: 247 SRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSC 293
+L + AL IV F V L F ++ +D C+WC +LSC
Sbjct: 427 -----VTIILRLAALAGSIVLFIV-LAKNFYTDDPSDGCTWCKHLSC 467
>gi|325297592|ref|YP_004257509.1| Peptidase S54, rhomboid domain [Bacteroides salanitronis DSM 18170]
gi|324317145|gb|ADY35036.1| Peptidase S54, rhomboid domain [Bacteroides salanitronis DSM 18170]
Length = 963
Score = 71.2 bits (173), Expect = 5e-10, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 27/167 (16%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
L P+ +L K GA ++ + WR +TC ++H G+IHLL NM +L++IGI LEQ
Sbjct: 561 LIEPTGISLMKWGA-DFGPLTLTGDWWRTVTCNFIHIGIIHLLMNMYALLYIGIFLEQII 619
Query: 151 GFVRVGFVYLLSGF---------------GGAYYLLFLFNAVSLLVLL----------AA 185
G ++ YLL+G GA +F + L L+ +
Sbjct: 620 GSRKLMTAYLLTGLFSALASLTAHPETISAGASGSIFGLYGIFLSYLIFNHKIEKHQRKS 679
Query: 186 ALLTLVVIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQF 231
L ++ + NL +G +DN AHIGG ++G +LG LL ++
Sbjct: 680 LLFSIGFFVIYNLLLGTKEEGIDNAAHIGGLVSGVILGITYLLADKY 726
>gi|29568120|gb|AAO61491.1| C16orf8-like protein [Takifugu rubripes]
Length = 855
Score = 71.2 bits (173), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 92/208 (44%), Gaps = 41/208 (19%)
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AYYLLFLF- 174
RL ++LHAG++H L ++ + + +E+ G++RV +Y+LSG G A + +
Sbjct: 655 RLWLSLFLHAGILHCLVSVFFQMTVLRDIEKLAGWLRVSIIYMLSGITGNLASSIFLPYR 714
Query: 175 -------NAVSLLVLLAAALL--------------TLVVIIAINLAVGILPHVDNFAHIG 213
N +L L L L+ I + G+LP +DNF HI
Sbjct: 715 AEVGPAGNQFGILACLKEELFQNWQNLERPWRAFGKLLAISTFLFSFGLLPWIDNFGHIC 774
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
GF++GF L F L FG R + Y+ L I +L+ +G LV
Sbjct: 775 GFVSGFFLSFTFLPYISFG---------------RSDMYRKRLQICVFLLVFLGLLATLV 819
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+LF C WC YL+C+P ++ C
Sbjct: 820 VLFYVYPVK--CDWCEYLTCIPITEMFC 845
>gi|336417117|ref|ZP_08597446.1| hypothetical protein HMPREF1017_04554 [Bacteroides ovatus
3_8_47FAA]
gi|335936742|gb|EGM98660.1| hypothetical protein HMPREF1017_04554 [Bacteroides ovatus
3_8_47FAA]
Length = 592
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 25/165 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE+
Sbjct: 185 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 151 GFVRVGFVYLLSGFGGAYYLLFL-------------------FNAVSLLVLLA-----AA 186
G R+ YLL+G A + L++ F A L +A A
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 303
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
L ++++ + NL G+ +DN AHIGG ++GF+LG + ++ +F
Sbjct: 304 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 348
>gi|299149420|ref|ZP_07042477.1| putative peptidase, S54 (rhomboid) family [Bacteroides sp. 3_1_23]
gi|298512607|gb|EFI36499.1| putative peptidase, S54 (rhomboid) family [Bacteroides sp. 3_1_23]
Length = 592
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 25/165 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE+
Sbjct: 185 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 151 GFVRVGFVYLLSGFGGAYYLLFL-------------------FNAVSLLVLLA-----AA 186
G R+ YLL+G A + L++ F A L +A A
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 303
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
L ++++ + NL G+ +DN AHIGG ++GF+LG + ++ +F
Sbjct: 304 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 348
>gi|423298194|ref|ZP_17276253.1| hypothetical protein HMPREF1070_04918 [Bacteroides ovatus
CL03T12C18]
gi|392663610|gb|EIY57158.1| hypothetical protein HMPREF1070_04918 [Bacteroides ovatus
CL03T12C18]
Length = 592
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 25/165 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE+
Sbjct: 185 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 151 GFVRVGFVYLLSGFGGAYYLLFL-------------------FNAVSLLVLLA-----AA 186
G R+ YLL+G A + L++ F A L +A A
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 303
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
L ++++ + NL G+ +DN AHIGG ++GF+LG + ++ +F
Sbjct: 304 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 348
>gi|383113335|ref|ZP_09934107.1| hypothetical protein BSGG_3039 [Bacteroides sp. D2]
gi|382948721|gb|EFS32339.2| hypothetical protein BSGG_3039 [Bacteroides sp. D2]
Length = 592
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 25/165 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE+
Sbjct: 185 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 151 GFVRVGFVYLLSGFGGAYYLLFL-------------------FNAVSLLVLLA-----AA 186
G R+ YLL+G A + L++ F A L +A A
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGETISTGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 303
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
L ++++ + NL G+ +DN AHIGG ++GF+LG + ++ +F
Sbjct: 304 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 348
>gi|237723366|ref|ZP_04553847.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
gi|229447888|gb|EEO53679.1| conserved hypothetical protein [Bacteroides sp. 2_2_4]
Length = 584
Score = 70.9 bits (172), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 25/165 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE+
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 235
Query: 151 GFVRVGFVYLLSGFGGAYYLLFL-------------------FNAVSLLVLLA-----AA 186
G R+ YLL+G A + L++ F A L +A A
Sbjct: 236 GGRRMFVSYLLTGLCSAAFSLYMHGETISTGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 295
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
L ++++ + NL G+ +DN AHIGG ++GF+LG + ++ +F
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 340
>gi|293373190|ref|ZP_06619552.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CMC
3f]
gi|292631838|gb|EFF50454.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CMC
3f]
Length = 584
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 25/165 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE+
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 235
Query: 151 GFVRVGFVYLLSGFGGAYYLLFL-------------------FNAVSLLVLLA-----AA 186
G R+ YLL+G A + L++ F A L +A A
Sbjct: 236 GGRRMFVSYLLTGLCSAAFSLYMHGETISTGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 295
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
L ++++ + NL G+ +DN AHIGG ++GF+LG + ++ +F
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 340
>gi|160886529|ref|ZP_02067532.1| hypothetical protein BACOVA_04540 [Bacteroides ovatus ATCC 8483]
gi|423289697|ref|ZP_17268547.1| hypothetical protein HMPREF1069_03590 [Bacteroides ovatus
CL02T12C04]
gi|156108414|gb|EDO10159.1| peptidase, S54 family [Bacteroides ovatus ATCC 8483]
gi|392667408|gb|EIY60918.1| hypothetical protein HMPREF1069_03590 [Bacteroides ovatus
CL02T12C04]
Length = 592
Score = 70.9 bits (172), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 84/165 (50%), Gaps = 25/165 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE+
Sbjct: 185 IMSPSTLSLLKWGA-DFGPLTLTGDWWRTVTCNFIHIGAFHLLMNMYAFMYVGLLLEELI 243
Query: 151 GFVRVGFVYLLSGFGGAYYLLFL-------------------FNAVSLLVLLA-----AA 186
G R+ YLL+G A + L++ F A L +A A
Sbjct: 244 GGRRMFVSYLLTGLCSAAFSLYMHGETISAGASGSIFGLYGIFLAFLLFHRIAKEQRKAL 303
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
L ++++ + NL G+ +DN AHIGG ++GF+LG + ++ +F
Sbjct: 304 LASILIFVGYNLVYGMKAGIDNAAHIGGLLSGFVLGIIYVVGYKF 348
>gi|71006244|ref|XP_757788.1| hypothetical protein UM01641.1 [Ustilago maydis 521]
gi|46097189|gb|EAK82422.1| hypothetical protein UM01641.1 [Ustilago maydis 521]
Length = 600
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/208 (29%), Positives = 89/208 (42%), Gaps = 41/208 (19%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS----------- 162
+QG+R +T I++HAG +H+ N+L + + ++E+ G + VY
Sbjct: 390 NQGYRFVTAIFVHAGFVHIFFNLLVQLTLCAQIEKLIGSIAYFIVYFAGGIGGNLLGGNF 449
Query: 163 --------GFGGAYYLLFLFNAVSLLV-----LLAAALLTLVVIIAINLAVGILPHV-DN 208
G GA Y V L A L + + AI L DN
Sbjct: 450 GLIGQPALGASGAIYTCISIELVDLCYNWKYEYRAKMRLLMSIGFAILGLALGLLPGLDN 509
Query: 209 FAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGF 268
FAHIGGF G L G L+ P ++RH++ +VL I+AL LL VGF
Sbjct: 510 FAHIGGFCVGLLGG--LMFAPSIHSSKRHRV------------VTWVLRILALGLL-VGF 554
Query: 269 TVGLVM-LFRGENGNDHCSWCHYLSCVP 295
GL + + C+WC YLSC+P
Sbjct: 555 FAGLASNFYNSPDPTKACTWCRYLSCLP 582
>gi|413920156|gb|AFW60088.1| hypothetical protein ZEAMMB73_684125 [Zea mays]
Length = 132
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 45/64 (70%), Gaps = 3/64 (4%)
Query: 35 QQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGP 94
++W+ WL+ VA VA+F+V MY+N+CP +N A FLGR +F+PL+ENPL GP
Sbjct: 52 RRWSPWLVSGATVACVAIFLVTMYVNDCPTHN---SNCAAAGFLGRFAFQPLRENPLLGP 108
Query: 95 SSST 98
SS+T
Sbjct: 109 SSAT 112
>gi|15894241|ref|NP_347590.1| hypothetical protein CA_C0954 [Clostridium acetobutylicum ATCC 824]
gi|337736171|ref|YP_004635618.1| hypothetical protein SMB_G0971 [Clostridium acetobutylicum DSM
1731]
gi|384457680|ref|YP_005670100.1| hypothetical protein CEA_G0966 [Clostridium acetobutylicum EA 2018]
gi|15023857|gb|AAK78930.1|AE007610_10 Uncharacterized membrane protein [Clostridium acetobutylicum ATCC
824]
gi|325508369|gb|ADZ20005.1| Conserved hypothetical protein [Clostridium acetobutylicum EA 2018]
gi|336291944|gb|AEI33078.1| hypothetical protein SMB_G0971 [Clostridium acetobutylicum DSM
1731]
Length = 328
Score = 70.5 bits (171), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 88/164 (53%), Gaps = 27/164 (16%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIR 145
L NP+ S+ L +GA + ++ Q +RLITC++LHAG+ H+ ANM SL +G
Sbjct: 161 LSGNPV-AISNQVLNFMGA-KNSVLIDNGQYYRLITCMFLHAGITHIGANMYSLYSMGYM 218
Query: 146 LEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLV--------LLAAALL--------- 188
LE +G +R +Y +SG +++ ++F+ SL V LL AA++
Sbjct: 219 LENIYGKLRYTAIYFISGITASFF-SYIFSRESLSVGASGAIFGLLGAAIVFGFKLRKRI 277
Query: 189 ------TLVVIIAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVL 225
+V + A+N+ + +P++D FAH GGF+ G ++ +L
Sbjct: 278 GKAFFANMVGVFALNIFISFTIPNIDIFAHFGGFLGGVVVSVIL 321
>gi|354557489|ref|ZP_08976747.1| Peptidase S54, rhomboid domain protein [Desulfitobacterium
metallireducens DSM 15288]
gi|353550283|gb|EHC19720.1| Peptidase S54, rhomboid domain protein [Desulfitobacterium
metallireducens DSM 15288]
Length = 325
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 75/140 (53%), Gaps = 22/140 (15%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
+ ++ + Q WRL T +++H G +HL N+ +L +G E++FG R F+YLLSG G+
Sbjct: 185 NELILQGQVWRLFTSMFIHIGFLHLAFNIYALWILGSFSEERFGRWRFLFIYLLSGLAGS 244
Query: 168 YYLLFLFNAVS------LLVLLAAAL---------------LTLVVIIAINLAVGIL-PH 205
+A+S + +L A + LVVIIAINL +G++ P
Sbjct: 245 VTSFLFTDALSAGASGAIFGILGALVPYSWKNPRLWKSGFGKNLVVIIAINLGIGLIQPQ 304
Query: 206 VDNFAHIGGFMAGFLLGFVL 225
+D +AH+GG + G +GF+
Sbjct: 305 IDIYAHLGGLLIGLAIGFLF 324
>gi|205374009|ref|ZP_03226809.1| hypothetical protein Bcoam_12572 [Bacillus coahuilensis m4-4]
Length = 392
Score = 70.1 bits (170), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/156 (35%), Positives = 81/156 (51%), Gaps = 28/156 (17%)
Query: 91 LFGPSSS--TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
LFG S++ TL GA +++ ++ E + WR IT I+LH G HLL N +LV IG +E+
Sbjct: 200 LFGGSTNPETLVFFGA-KFNPLILEGEWWRFITPIFLHIGFFHLLMNTFALVLIGREVEK 258
Query: 149 QFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAAL--------------------- 187
FG R F+YLL+G G F FN V L + A+
Sbjct: 259 IFGKWRFLFIYLLAGIIGC-IASFYFNPVGLSAGASGAIFGCFGALLYFGYTFPQVFFRT 317
Query: 188 --LTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFL 220
+ ++VI+ +NL +G +P +DN HIGG + GF+
Sbjct: 318 MGMNILVIVGLNLVLGFTVPGIDNAGHIGGLVGGFI 353
>gi|324503187|gb|ADY41389.1| Rhomboid family member 1 [Ascaris suum]
Length = 952
Score = 69.7 bits (169), Expect = 2e-09, Method: Composition-based stats.
Identities = 55/214 (25%), Positives = 92/214 (42%), Gaps = 42/214 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL I+LHAG+IH +L + LE+ G+ R+ VY+ +G GG
Sbjct: 745 QFYRLFIPIFLHAGIIHCAITVLVQWYYMRDLEKLIGWARMAIVYMGAGIGGSLASAIFL 804
Query: 167 -----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNF 209
A Y ++N L+ +AL L + + G+LP +DN+
Sbjct: 805 PYRPEVGPAGSHIGIFAAMYTDIIYNW-RLIQRPWSALRELAMFTLVLFICGLLPWIDNW 863
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
AH+ GF+ GFLL F + + H H+ ++ ++A ++ G
Sbjct: 864 AHLFGFIFGFLLSLA-----TFPYIQSHN----------HDRKWRLMIVIACLMTAFGLF 908
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ L+ +F D C +C Y +C+P + C N
Sbjct: 909 MLLLAVFYLRADFD-CPFCEYFNCLPFTDHLCDN 941
>gi|220929279|ref|YP_002506188.1| rhomboid family protein [Clostridium cellulolyticum H10]
gi|219999607|gb|ACL76208.1| Rhomboid family protein [Clostridium cellulolyticum H10]
Length = 519
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 95/206 (46%), Gaps = 44/206 (21%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L+ GA + + ++ E Q WR I+ ++LH ++HL N SL IG ++E+ FG R +
Sbjct: 214 LEPFGA-KVNNLIMEGQYWRFISPMFLHGDIVHLAVNCYSLYIIGSQVEKIFGRGRFLAI 272
Query: 159 YLLSGF-GGAYYLLFLFNAV-----SLLVLLAAAL---------------LTLVVIIAIN 197
Y +SGF G A F N+ ++ L+ A L + L+ ++ IN
Sbjct: 273 YFVSGFIGSAASFAFSLNSSVGASGAIFGLVGAMLYFSLRRPALLKSSYGVNLITMLIIN 332
Query: 198 LAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVL 256
LA G + +DN AHIGGF+ GF L A A R + +L
Sbjct: 333 LAYGFMNKRIDNHAHIGGFVGGF-------------------LTAGAVYSYREINGKNIL 373
Query: 257 CIVALVLLIVGFTVGLVMLFRGENGN 282
V +LL+ T+G MLF G N +
Sbjct: 374 KKVTSILLVAAITMG--MLFYGFNND 397
>gi|71002610|ref|XP_755986.1| rhomboid family membrane protein [Aspergillus fumigatus Af293]
gi|66853624|gb|EAL93948.1| rhomboid family membrane protein [Aspergillus fumigatus Af293]
gi|159130040|gb|EDP55154.1| rhomboid family membrane protein [Aspergillus fumigatus A1163]
Length = 524
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/261 (25%), Positives = 106/261 (40%), Gaps = 69/261 (26%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I ++LH G+IH+ N+L + + +E+ G+ R FVYL SG
Sbjct: 249 DDRPEPNQWFRFIIPMFLHTGIIHIGFNLLVQMTMAADMERTVGWWRFAFVYLASGIWGF 308
Query: 164 -FGGAYYL-----------LFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGI 202
GG Y LF A+ +L LL A L+ +V+ IAI+ +G+
Sbjct: 309 VLGGNYAAQGESSCGCSGSLFGILALYILDLLYTWGERSSPWAELVIMVLGIAISFVLGL 368
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
LP +DNF+HIGGF+ G G ++ LR + G A + + +P V
Sbjct: 369 LPGLDNFSHIGGFIMGLASGLCIMRSPNALRERIGLARNPYVAMTGAAGATADPGNKVTN 428
Query: 258 IVALVL-------------------------------------LIVGFTVGLVMLFRG-- 278
+ + +V +G ++L
Sbjct: 429 PGSTIAEFFKAHKGSKSSKDSSALGFFKGRKPLWWAWWLVRLGALVAVLIGFILLIVDFY 488
Query: 279 ENGNDHCSWCHYLSCVPTSKW 299
+ +CSWC+ LSC+P + W
Sbjct: 489 KYHTSNCSWCYRLSCLPVNDW 509
>gi|443925758|gb|ELU44527.1| rhomboid family protein [Rhizoctonia solani AG-1 IA]
Length = 1236
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 98/221 (44%), Gaps = 49/221 (22%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------- 165
+Q +R IT I+LHAG+IH NM + + + ++E++ G +Y +G FG
Sbjct: 602 NQWFRFITPIFLHAGIIHFALNMFAQLTLSAQVEREMGSGAFLILYASAGIFGNVLGGNF 661
Query: 166 --------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHVDN 208
GA +F AV + LLA L L V + I +A+G +P VDN
Sbjct: 662 ALVGVPSVGASGAIFGTVAVMWVDLLAHWKIEYRPGRKLAMLCVDLIIGVALGFVPGVDN 721
Query: 209 FAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIV-- 266
FAH+GGF+ G L VL P +RH K+ + + VA+VL +V
Sbjct: 722 FAHLGGFLMGLLTAIVLY--PVISTTKRH--------KAIMWICRLAMIPVAVVLFVVLI 771
Query: 267 ------------GFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
F +G+V L C WC YLSC+P
Sbjct: 772 RNFYTSDPYAGALFPLGVVALSAHIFFIVACQWCRYLSCIP 812
>gi|339235851|ref|XP_003379480.1| peptidase, S54 family [Trichinella spiralis]
gi|316977860|gb|EFV60908.1| peptidase, S54 family [Trichinella spiralis]
Length = 966
Score = 69.3 bits (168), Expect = 2e-09, Method: Composition-based stats.
Identities = 59/210 (28%), Positives = 89/210 (42%), Gaps = 40/210 (19%)
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAY-------YL 170
RLI ++LHAG+IH ++ F+ LE+ G+ RV +Y++SG GG Y
Sbjct: 546 RLIIPLFLHAGIIHCFITVVIQYFLLRDLEKLVGWSRVAVIYMISGVGGYLGSAVFVPYQ 605
Query: 171 LFLFNAVSLLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNFAHIG 213
+ A S LLA AL L+ I +G+LP +DN+AH
Sbjct: 606 AEVGPAGSQFGLLAGLVVDVVYSWEMIARPWKALGQLLAFIVFLFILGLLPWIDNYAHAF 665
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
GF+ G LL L QF R + ++ + + + + +G LV
Sbjct: 666 GFVFGLLLSLALFPYIQFDENGRR---------------KRIIIVASSLTICIGLLGVLV 710
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+LF N C C Y +C+P + C N
Sbjct: 711 ILFY-VNPLWSCDNCVYFNCIPFTDHLCDN 739
>gi|403237491|ref|ZP_10916077.1| rhomboid protein membrane-associated serine peptidase [Bacillus sp.
10403023]
Length = 515
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/171 (32%), Positives = 87/171 (50%), Gaps = 27/171 (15%)
Query: 91 LFGPSS--STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
L+G S+ TL K GA E R+++ + WR T + LH G IHLL N +L ++G +E+
Sbjct: 200 LYGGSTNTETLLKYGAKENFRILN-GEWWRFFTPMILHIGFIHLLMNTFALYYLGTEVER 258
Query: 149 QFGFVRVGFVYLLSGFGGAYYLLFLFNA-------------VSLLVLLAAALLTL----- 190
+G R +Y+ +GF G+ F+FNA L+ A +L
Sbjct: 259 LYGKSRFLMIYVFAGFLGS-LASFVFNANISAGASGAIFGCFGALLFFGTAYPSLFFRTM 317
Query: 191 ----VVIIAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
+ II INL +G ++P +DN HIGG + GFL ++ L + +A+R
Sbjct: 318 GPNVIGIIIINLVLGFMIPGIDNSGHIGGLVGGFLAASIVHLPKRKDYAKR 368
>gi|384250948|gb|EIE24426.1| U-box-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 578
Score = 69.3 bits (168), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/251 (27%), Positives = 110/251 (43%), Gaps = 60/251 (23%)
Query: 45 FVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGA 104
VA F++A++ +N+W+ E L +NPL GPS + L+ LG+
Sbjct: 271 LTAGQVATFVLALW-----QNDWQ--------------IEALAQNPLVGPSEAALRALGS 311
Query: 105 LEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ--QFGFVRVGFVYLLS 162
L +V Q WRLIT I+L +G+I L+ +++L G+ + + +F V V +Y+L
Sbjct: 312 LSTSDIVDRRQYWRLITSIFLCSGIIELVLAVMTLWAFGVHVSRALRFSAVSVAALYILP 371
Query: 163 GFGGAYYLLFLFNAV-------SLLVLLAAA-----------------LLTLVVIIAINL 198
G GA + L V ++ L+ AA L+ L V IA
Sbjct: 372 GIVGALVSVNLSTDVPSVGAPAAVCGLIGAALADQIVGSKAYRNHACTLIMLAVAIAQFT 431
Query: 199 AVGILP-HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYV-- 255
G+LP D F +G +AG L V+ L P +R + P+Q V
Sbjct: 432 ITGLLPLSSDLFFIVGSMVAGAL---VMCLLPSVEAVQRPLI---------WRPFQAVCA 479
Query: 256 LCIVALVLLIV 266
LC+ A++ +
Sbjct: 480 LCLSAIIATCI 490
>gi|320592945|gb|EFX05354.1| rhomboid family membrane protein [Grosmannia clavigera kw1407]
Length = 734
Score = 68.9 bits (167), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/240 (30%), Positives = 104/240 (43%), Gaps = 48/240 (20%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG- 165
D+ Q +R I +++HAG+IH+ NM+ + +G +E+ G +R VY+ SG FG
Sbjct: 468 DQSPQPDQWFRFIVPMFMHAGLIHIGFNMMLQLTMGRDMERAIGSIRFFIVYICSGIFGF 527
Query: 166 --------------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGI 202
GA LF A++LL LL L+ + + + I+ +G+
Sbjct: 528 VLGGNYAATGISSTGASGALFGVIALTLLDLLYSWRDRRNPVKDLMFIFLDVLISFVLGL 587
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERHQLPAQARVKSR--------- 248
LP +DNF+HIGGF G LG +L LR + G A S
Sbjct: 588 LPGLDNFSHIGGFFMGLALGVSVLHSPNALRRRVGEENATYAAVNATYTSPTASGVAAFV 647
Query: 249 HNPYQYVLCIVAL----VLLIVGFTVGLVMLFRGENGN-----DHCSWCHYLSCVPTSKW 299
NP L LL VGF V +++LF N C WC YLSC+P W
Sbjct: 648 RNPLATFRNRRPLWWAWWLLRVGFVVLVIVLFVLLLKNFYVYRKTCGWCKYLSCLPVHNW 707
>gi|444727806|gb|ELW68284.1| Inactive rhomboid protein 2 [Tupaia chinensis]
Length = 1213
Score = 68.6 bits (166), Expect = 3e-09, Method: Composition-based stats.
Identities = 55/186 (29%), Positives = 92/186 (49%), Gaps = 31/186 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGVIH L +++ + + LE+ G+ R+ +++LSG G A +L
Sbjct: 941 QFYRLWLSLFLHAGVIHCLVSVVFQMTVLRDLEKLAGWHRIAIIFVLSGITGNLASAIFL 1000
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L ++ A G+LP +DN A
Sbjct: 1001 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLHLSAVMLFLFACGLLPWIDNIA 1060
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRH---NPYQYVLCIVALVLLIVG 267
HI GF++G LL F L FG +++++ +A + S P++ L + A++L +
Sbjct: 1061 HIFGFLSGLLLAFAFLPYITFGTSDKYR--KRALILSWQLLERPWKAFLHLSAVMLFL-- 1116
Query: 268 FTVGLV 273
F GL+
Sbjct: 1117 FACGLL 1122
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 62/220 (28%), Positives = 90/220 (40%), Gaps = 34/220 (15%)
Query: 93 GPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGI-----RLE 147
GP+ S L L V Q W+L+ W +HL A ML L G+ +
Sbjct: 1007 GPAGSQFGLLACL----FVELFQSWQLLERPW--KAFLHLSAVMLFLFACGLLPWIDNIA 1060
Query: 148 QQFGFVR---VGFV---YLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVG 201
FGF+ + F Y+ G Y L + LL A L L ++ A G
Sbjct: 1061 HIFGFLSGLLLAFAFLPYITFGTSDKYRKRALILSWQLLERPWKAFLHLSAVMLFLFACG 1120
Query: 202 ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVAL 261
+LP +DN AHI GF++G LL F L FG +++++ + L +V+L
Sbjct: 1121 LLPWIDNIAHIFGFLSGLLLAFAFLPYITFGTSDKYR--------------KRALILVSL 1166
Query: 262 VLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
L+ G LV N W YL+C+P + C
Sbjct: 1167 -LVFAGLFASLVTWLYVHPIN--WPWIEYLTCLPFTSRFC 1203
>gi|227892800|ref|ZP_04010605.1| S54 family peptidase [Lactobacillus ultunensis DSM 16047]
gi|227865441|gb|EEJ72862.1| S54 family peptidase [Lactobacillus ultunensis DSM 16047]
Length = 226
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 95/198 (47%), Gaps = 41/198 (20%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S++ L K+GA+ VV HQ WRL T +LH GV+HL++N + + ++G +E G
Sbjct: 34 ESTNVLMKMGAMNNLAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYIEPIMGHY 93
Query: 154 RVGFVYLLSGFGGAYY-----------------LLFLFNAVSLLVL--LAAALLTLV--- 191
R YLL+G GG + L LF A++ + L + +++ +
Sbjct: 94 RYLATYLLAGIGGNLFSLAFSADRGLSAGASTALFGLFGAMTAIGLRNIHNPMISFLGRQ 153
Query: 192 --VIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSR 248
V+ INLA+ I +P +D + H+GG + GFLL VL RV +
Sbjct: 154 AFVLAIINLALDIFIPGIDIWGHVGGLITGFLLAIVL----------------GDRVMKK 197
Query: 249 HNPYQYVLCIVALVLLIV 266
++P VL AL+ +V
Sbjct: 198 YDPKWRVLAGAALIFYVV 215
>gi|389751526|gb|EIM92599.1| rhomboid-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 482
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 86/366 (23%), Positives = 147/366 (40%), Gaps = 106/366 (28%)
Query: 4 GDLERGKNISNNNNNRGSY-SSGSYYVEP-------GSDQQWTSWLIPMFVVANVAVFIV 55
D +R + +S + G + S+G Y +E G +Q ++ +A V VFI
Sbjct: 146 ADGQRSQPVSEKPSPWGRFLSNGKYPIEQRIEDKKRGIGRQKYPIVVWALSIAMVGVFIN 205
Query: 56 AMYINNCPKNNWEGGRGCVARFLGR-LSFEPLKENPLFGPSSSTLQKLGA---------- 104
+ +N +R G +SF+P NP+ GPS+S L LGA
Sbjct: 206 ELVVN--------------SRAQGTPVSFKP-TVNPMLGPSTSALINLGARFPPCMKNVT 250
Query: 105 ---------------------------LEWDRVVHEHQGWRLITCIWLHAGVIHLLANML 137
+ + +Q WR ++ +++HAG IH++ N+L
Sbjct: 251 DVPVSTLFPCLNDTANPPDITCAISEICDLSDANNPNQAWRFVSPVFVHAGFIHIILNLL 310
Query: 138 SLVFIGIRLEQQFGFVRVGFVYLLSG-FG---------------GAYYLLFLFNAVSLLV 181
+ + ++E++ G +Y +G FG GA +F AVS +
Sbjct: 311 AQLTAVAQIEREMGSGGFIILYFAAGIFGNVLGGNFALVGVPSMGASGAIFGSIAVSWID 370
Query: 182 LLA---------AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L A L+ +++ + +A+G +P +H+GGF+ G L+G P
Sbjct: 371 LFAHWQFQYRPVRKLVFMIIELVFVIAMGFIP-----SHLGGFLMGLLVGATFY--PVIS 423
Query: 233 WAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLS 292
+H++ + L + A+ L IV + V L F + CSWC Y+S
Sbjct: 424 TTRKHKM------------IMWGLRLAAIPLAIVLYVV-LTRNFYTSDPYAACSWCRYIS 470
Query: 293 CVPTSK 298
C+PTS
Sbjct: 471 CIPTSS 476
>gi|335284752|ref|XP_003124711.2| PREDICTED: inactive rhomboid protein 1-like [Sus scrofa]
Length = 855
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q V +Q V + L L+V F V
Sbjct: 772 HISGFVSGLFLSFAFLPYISFGKFDLYRKRCQIIV------FQVVF-LGLLAGLVVLFYV 824
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
V C WC +L+C+P + C
Sbjct: 825 HPV----------RCEWCEFLTCIPFTDKFC 845
>gi|19483909|gb|AAH23469.1| Rhbdf1 protein, partial [Mus musculus]
Length = 621
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 91/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G
Sbjct: 418 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 477
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 478 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 537
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + I +V L + +
Sbjct: 538 HISGFVSGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQVVFLGLLAGL 584
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 585 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 611
>gi|20071092|gb|AAH27346.1| Rhomboid family 1 (Drosophila) [Mus musculus]
Length = 856
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + I +V L + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQVVFLGLLAGL 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 820 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 846
>gi|18463968|gb|AAL73049.1| C16ORF8 [Sphoeroides nephelus]
Length = 773
Score = 68.6 bits (166), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 96/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G++R+ +Y++SG G A +L
Sbjct: 570 QFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYIISGITGNLASAIFL 629
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 630 PYRAEVGPAGSQFGILACLFVELFQSWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFA 689
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG R + Y+ I+ +L+ VG
Sbjct: 690 HISGFISGFFLSFAFLPYISFG---------------RMDLYRKRCQIIVFLLVFVGLFS 734
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GL +LF C WC L+C+P + C
Sbjct: 735 GLAVLFYVYPIK--CDWCELLTCIPFTDKFC 763
>gi|212530860|ref|XP_002145587.1| rhomboid family membrane protein [Talaromyces marneffei ATCC 18224]
gi|210074985|gb|EEA29072.1| rhomboid family membrane protein [Talaromyces marneffei ATCC 18224]
Length = 529
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 71/149 (47%), Gaps = 25/149 (16%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I ++LHAG++H+ NML + +G +E++ G+ R VY SG
Sbjct: 253 DDQPEPNQWFRFIVPMFLHAGLVHIGFNMLMQMTVGADMERRIGWWRYALVYFSSGIFGF 312
Query: 164 -FGGAYYLLFLFNAVSLLVLLAA--------------------ALLTLVVIIAINLAVGI 202
GG Y + + + L L+ L++ I ++ +G+
Sbjct: 313 VMGGNYAAQGISSTGASGALFGLVALSLLDLLYTWGERRSPWVELIFLIIEIGVSFVLGL 372
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
LP +DNF+HIGGF+ G +G ++ P +
Sbjct: 373 LPGLDNFSHIGGFIMGLAMGLCMMRSPNY 401
>gi|148691816|gb|EDL23763.1| rhomboid family 1 (Drosophila) [Mus musculus]
Length = 856
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + I +V L + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQVVFLGLLAGL 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 820 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 846
>gi|397642301|gb|EJK75152.1| hypothetical protein THAOC_03139 [Thalassiosira oceanica]
Length = 399
Score = 68.2 bits (165), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/175 (32%), Positives = 86/175 (49%), Gaps = 36/175 (20%)
Query: 85 PLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGI 144
PL NP+ GP TL GA +V + + +RL+T I+LHAG+IHLL N++ +G
Sbjct: 136 PLSINPMIGPYPDTLNYWGAKNAVLIVEDGELYRLVTPIFLHAGLIHLLGNVMVQAEVGN 195
Query: 145 RLEQQFGFVRVGFVYLLSG--------------------------FGGAYYLLFLF---N 175
R E+++G V +Y+ S FG + +FL
Sbjct: 196 RWEKEWGSVIWMIIYMGSAVGSSIASTCFMPDNISVGSSGAVMGLFGAKFSEIFLLCCER 255
Query: 176 AVSLLVLLAAAL----LTLVV--IIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
+ S+ L A + LVV +I ++L + +P+VD AH+GG +AGF+LG V
Sbjct: 256 SRSIRDLAAEKARKRQVCLVVGGLIIVSL-MSFIPYVDWAAHLGGMVAGFVLGLV 309
>gi|226437617|ref|NP_034247.2| inactive rhomboid protein 1 [Mus musculus]
gi|190360227|sp|Q6PIX5.2|RHDF1_MOUSE RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Epidermal growth factor receptor-related protein;
AltName: Full=Rhomboid family member 1
Length = 856
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + I +V L + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQVVFLGLLAGL 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 820 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 846
>gi|119912793|ref|XP_596084.3| PREDICTED: inactive rhomboid protein 2 [Bos taurus]
gi|297487396|ref|XP_002696211.1| PREDICTED: inactive rhomboid protein 2 [Bos taurus]
gi|296476011|tpg|DAA18126.1| TPA: rhomboid 5 homolog 2-like [Bos taurus]
Length = 825
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGVIH L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 622 QFYRLWLSLFLHAGVIHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALFL 681
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 682 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 741
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ + L +V+LV+ F
Sbjct: 742 HIFGFLSGLLLAFAFLPYITFGTSDKYR--------------KRALILVSLVVFAGLFAS 787
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ L+ H W YL+C P + C
Sbjct: 788 LVIWLY---IYPIHWPWVEYLTCFPFTSRFC 815
>gi|395835625|ref|XP_003790777.1| PREDICTED: inactive rhomboid protein 1 [Otolemur garnettii]
Length = 856
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +LV A L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILVRPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + I +V L + +
Sbjct: 773 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQVVFLGLLAGL 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 820 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 846
>gi|388852860|emb|CCF53545.1| uncharacterized protein [Ustilago hordei]
Length = 603
Score = 68.2 bits (165), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 65/208 (31%), Positives = 95/208 (45%), Gaps = 41/208 (19%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS----------- 162
+Q +R IT I++HAG++H+L N+L + + ++E+ G + V+
Sbjct: 391 NQSYRFITAIFVHAGLVHVLFNLLVQLTLCAQIEKIIGSIAYILVWFAGGVGGNLLGGNF 450
Query: 163 --------GFGGAYYLLFLFNAVSLLV-----LLAAALLTLVVIIAI-NLAVGILPHVDN 208
G GA Y V L+ A A L + + A+ LA+G+LP +DN
Sbjct: 451 GLIGQPSLGASGAIYTCISIELVDLVYNWKYEYRAKARLAMSLGFAVVGLALGLLPGLDN 510
Query: 209 FAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGF 268
FAHIGGF G L G L+ P S+H +VL I+AL L VGF
Sbjct: 511 FAHIGGFCVGLLGG--LIFAPSI------------HPNSKHRVITWVLRIIALA-LAVGF 555
Query: 269 TVGLVM-LFRGENGNDHCSWCHYLSCVP 295
GL + + C+WC YLSC+P
Sbjct: 556 FAGLASNFYSSPDPTKACTWCRYLSCLP 583
>gi|410902671|ref|XP_003964817.1| PREDICTED: inactive rhomboid protein 1-like [Takifugu rubripes]
Length = 858
Score = 67.8 bits (164), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 97/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G++R+ +Y++SG G A +L
Sbjct: 655 QFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYIISGITGNLASAIFL 714
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 715 PYRAEVGPAGSQFGILACLFVELFQSWQILAQPWRAFTKLLCVVLFLFAFGLLPWIDNFA 774
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG R + Y+ I+ +++ +G
Sbjct: 775 HISGFISGFFLSFAFLPYISFG---------------RMDLYRKRCQIIVFLMVFLGLFS 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC L+C+P + C
Sbjct: 820 GLVVLFYVYPIK--CEWCELLTCIPFTDKFC 848
>gi|354499596|ref|XP_003511894.1| PREDICTED: inactive rhomboid protein 1-like [Cricetulus griseus]
gi|344254275|gb|EGW10379.1| Rhomboid family member 1 [Cricetulus griseus]
Length = 856
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 94/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + +Q V + L+++ +
Sbjct: 773 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII------FQAVFLGLLAGLVVLFYVY 826
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 827 PV-----------RCEWCEFLTCIPFTDKFC 846
>gi|440895146|gb|ELR47408.1| Rhomboid family member 2 [Bos grunniens mutus]
Length = 846
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGVIH L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 643 QFYRLWLSLFLHAGVIHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALFL 702
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 703 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 762
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ + L +V+LV+ F
Sbjct: 763 HIFGFLSGLLLAFAFLPYITFGTSDKYR--------------KRALILVSLVVFAGLFAS 808
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ L+ H W YL+C P + C
Sbjct: 809 LVIWLY---IYPIHWPWVEYLTCFPFTSRFC 836
>gi|426238434|ref|XP_004013158.1| PREDICTED: inactive rhomboid protein 2 [Ovis aries]
Length = 825
Score = 67.8 bits (164), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 622 QFYRLWLSLFLHAGVVHCLVSVIFQMTILRDLEKLAGWHRISIIFILSGITGNLASALFL 681
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 682 PYRAEVGPAGSQFGILACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 741
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ + L +V+LV+ F
Sbjct: 742 HIFGFLSGLLLAFAFLPYITFGTSDKYR--------------KRALILVSLVVFAGLFAS 787
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ L+ H W YL+C P + C
Sbjct: 788 LVIWLYVYPI---HWPWVEYLTCFPFTSRFC 815
>gi|390471022|ref|XP_003734416.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1-like
[Callithrix jacchus]
Length = 836
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 633 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 692
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 693 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 752
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q V +Q V + L+++ +
Sbjct: 753 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV------FQVVFLGLLAGLVVLFYVY 806
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ C WC +L+C+P + C
Sbjct: 807 PV-----------RCEWCEFLTCIPFTDKFCEK 828
>gi|157427926|ref|NP_001098870.1| inactive rhomboid protein 1 [Bos taurus]
gi|190360184|sp|A7YWH9.1|RHDF1_BOVIN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|157279163|gb|AAI34589.1| RHBDF1 protein [Bos taurus]
gi|296473636|tpg|DAA15751.1| TPA: rhomboid family 1 [Bos taurus]
Length = 856
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + + LV L + +
Sbjct: 773 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIVFQLVFLGLLAGL 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 820 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 846
>gi|212638734|ref|YP_002315254.1| serine protease of Rhomboid family, contains TPR repeats
[Anoxybacillus flavithermus WK1]
gi|212560214|gb|ACJ33269.1| Serine protease of Rhomboid family, contains TPR repeats
[Anoxybacillus flavithermus WK1]
Length = 517
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 73/145 (50%), Gaps = 23/145 (15%)
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
TL + GA +++ ++ + + WR T I LH G +HL N +L ++G +E+ +G +R F
Sbjct: 216 TLIQYGA-KFNPLILQGEWWRFFTPIVLHIGFVHLFMNTFALYYLGPLVEKLYGSLRFLF 274
Query: 158 VYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVIIAI 196
+YL +GF G+ + L F + + ++ +I I
Sbjct: 275 IYLFAGFAGSLASFLFSPSVSAGASGAIFGCFGALLYFGKAKPHIFFRTIGMNVITVIGI 334
Query: 197 NLAVG-ILPHVDNFAHIGGFMAGFL 220
NLA G ++P++DN HIGG + GFL
Sbjct: 335 NLAFGLVVPNIDNAGHIGGLIGGFL 359
>gi|187934985|ref|YP_001884978.1| rhomboid family protein [Clostridium botulinum B str. Eklund 17B]
gi|187723138|gb|ACD24359.1| rhomboid family protein [Clostridium botulinum B str. Eklund 17B]
Length = 321
Score = 67.4 bits (163), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 25/148 (16%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+++ ++++ + WRLITC +LH G+ HLL+NM SL +G ++E+ FG + +Y S
Sbjct: 174 KYNPLIYQGEIWRLITCAFLHGGIAHLLSNMYSLYILGPQVERIFGLKKYLCIYFTSAIT 233
Query: 166 GAYYLLFLFNAVSLLV--------LLAAAL---------------LTLVVIIAINLAVG- 201
+ L L N S+ V LL A L L LV II + L G
Sbjct: 234 SS-LLSVLLNENSVSVGASGAIFGLLGAILIFSIKERHRIKKGYILNLVGIIILILMSGF 292
Query: 202 ILPHVDNFAHIGGFMAGFLLGFVLLLRP 229
+ +DN HIGGF+ G ++G +L+++
Sbjct: 293 TIRGIDNLGHIGGFLGGLIMGRILMIKK 320
>gi|416361193|ref|ZP_11682501.1| rhomboid family membrane protein [Clostridium botulinum C str.
Stockholm]
gi|338194390|gb|EGO86853.1| rhomboid family membrane protein [Clostridium botulinum C str.
Stockholm]
Length = 200
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 23/146 (15%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
LGA E + +V Q +RLITC++LH G++HL+ NM +L +G +E+ +G + +YLL
Sbjct: 49 LGANE-NTLVASGQYYRLITCMFLHGGLMHLILNMYALNALGPIIEKSYGKNKYIIIYLL 107
Query: 162 SGFGGAYYLLFLFNAVSL-----LVLLAAALLTLVV----------------IIAINLAV 200
G + N VS+ + L A+L L + +I +N+ +
Sbjct: 108 GGLISSISSFIFSNGVSIGASGAIFSLLGAILVLTIKMRSVVGKDTIKNVISVIVVNIFI 167
Query: 201 GI-LPHVDNFAHIGGFMAGFLLGFVL 225
G+ +P++DNFAH+GG + G L +L
Sbjct: 168 GLAIPNIDNFAHVGGLLGGVFLSILL 193
>gi|320102859|ref|YP_004178450.1| rhomboid family protein [Isosphaera pallida ATCC 43644]
gi|319750141|gb|ADV61901.1| Rhomboid family protein [Isosphaera pallida ATCC 43644]
Length = 694
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 76/159 (47%), Gaps = 27/159 (16%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P L G L RV + WR +T ++LH G++HL N L +G +E+ FG
Sbjct: 317 PDPEDLIAWGCLYGPRVALFDESWRALTMMFLHVGILHLAMNAWCLWVVGPLIERMFGHG 376
Query: 154 RVGFVYLLSGFGGA-------------------YYLLFLFNAVSL-----LVLLAAALLT 189
+YL++G GGA + L+ A SL + L A L+
Sbjct: 377 SFLAIYLIAGLGGATASLAWHPINLSAGASGAVFGLIGALGAASLHRPQSIPPLVARTLS 436
Query: 190 LVV--IIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
V +A+NLA+G+ LP +DN AH+GG + GFL G +L
Sbjct: 437 RAVWGFVALNLAIGLSLPMIDNAAHLGGLVCGFLAGAIL 475
>gi|253682458|ref|ZP_04863255.1| putative rhomboid protease GluP [Clostridium botulinum D str. 1873]
gi|253562170|gb|EES91622.1| putative rhomboid protease GluP [Clostridium botulinum D str. 1873]
Length = 200
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 78/146 (53%), Gaps = 23/146 (15%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
LGA E + +V Q +RLITC++LH G++HL+ NM +L +G +E+ +G + +YLL
Sbjct: 49 LGANE-NTLVASGQYYRLITCMFLHGGLMHLILNMYALNALGPIIEKSYGKNKYIIIYLL 107
Query: 162 SGFGGAYYLLFLFNAVSL-----LVLLAAALLTLVV----------------IIAINLAV 200
G + N VS+ + L A+L L + +I +N+ +
Sbjct: 108 GGLISSISSFIFSNGVSIGASGAIFSLLGAILVLTIKMRSVVGKDTIKNVISVIVVNIFI 167
Query: 201 GI-LPHVDNFAHIGGFMAGFLLGFVL 225
G+ +P++DNFAH+GG + G L +L
Sbjct: 168 GLAIPNIDNFAHVGGLLGGVFLSILL 193
>gi|307192271|gb|EFN75561.1| Rhomboid family member 1 [Harpegnathos saltator]
Length = 872
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 72/148 (48%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS------------ 162
Q +RL T +LHAG++HL +L F+ LE+ G +R+ F+Y +
Sbjct: 665 QFYRLFTTTFLHAGIVHLAITLLIQYFLMRDLEKLTGSLRIAFIYFIGALAGNLASAIFV 724
Query: 163 ------GFGGAYYLLFLFNAVS------LLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
G GA++ L V +L AL L++I+ L +GILP VDN+A
Sbjct: 725 PYRAEVGPAGAHFALLATLVVEVLHCWPMLKHPRRALSKLILILMGLLVLGILPWVDNYA 784
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
H+ GF+ GFL + L+ FG +R +
Sbjct: 785 HLFGFIFGFLAAYALMPFISFGHYDRRR 812
>gi|392571168|gb|EIW64340.1| rhomboid-domain-containing protein [Trametes versicolor FP-101664
SS1]
Length = 317
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 98/209 (46%), Gaps = 45/209 (21%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-----FGGAYY 169
Q +R IT I+LHAG+IH L NML+ + ++E++ G + +Y +G GG +
Sbjct: 123 QWFRFITPIFLHAGLIHYLLNMLAQLTASAQIEREMGSLPFLILYSAAGIFGNVLGGNFA 182
Query: 170 LL-----------FLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHVDNF 209
LL F AV+ + L A L ++V + I +A+G +P
Sbjct: 183 LLGSPSVGASGAIFGTIAVAWIDLFAHWRYTFRPGRKLAFMIVELVIGVAIGFIP----- 237
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
+H+GG G L+ + L P + RH++ VL ++A+ L IV
Sbjct: 238 SHLGGLAMGLLVA--MALYPIISPSNRHRI------------IVIVLRLIAVPLAIVMMV 283
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
V L+ F + + CSWC YLSC+PTS
Sbjct: 284 V-LIRNFYKSDPSAACSWCRYLSCIPTSS 311
>gi|405950095|gb|EKC18101.1| Rhomboid family member 1 [Crassostrea gigas]
Length = 781
Score = 67.4 bits (163), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 101/228 (44%), Gaps = 40/228 (17%)
Query: 100 QKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVY 159
Q G +++ + Q +RL T ++LH G+ HL+ + + +E+ G +R+ +Y
Sbjct: 555 QICGMMDFADENNPDQFYRLWTSLFLHGGLFHLVITIGFQFLVMRDIEKLTGCIRLAIIY 614
Query: 160 LLSGFGG------------------------AYYLLFLFNAVSLLVLLAAALLTLVVIIA 195
L SG G A L+ + ++ +L A+L + IA
Sbjct: 615 LGSGVAGNLASSIFLPYHVEVGPAGCQFGILACLLVEVLQSIQMLKRPCLAILKIGGFIA 674
Query: 196 INLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYV 255
+G+LP +DN+AH+ GF+ GFLL F LL FG +R + + +
Sbjct: 675 FLFILGLLPWIDNWAHVCGFLFGFLLAFSLLPYVSFGEFDRRR--------------KII 720
Query: 256 LCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
I++L I F + LV+LF D C C Y +C+P + C N
Sbjct: 721 GIILSLGGAIFLFII-LVVLFYVLPLYD-CPGCQYFNCIPLTDDFCKN 766
>gi|311030831|ref|ZP_07708921.1| Serine protease of Rhomboid family, contains TPR repeats [Bacillus
sp. m3-13]
Length = 503
Score = 67.4 bits (163), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 81/155 (52%), Gaps = 23/155 (14%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+S TL K GA +++ + E + WR T I LH G +HLL N +++ ++G +E+ +G +R
Sbjct: 202 NSETLVKYGA-KYNPAILEGEWWRFFTPIVLHIGFLHLLLNTMAIFYLGSAVERIYGNIR 260
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVS----------LLVLLAAALL-----------TLVVI 193
+YL +GF G+ +++S LL ++ ++V+
Sbjct: 261 FLAIYLFAGFTGSLASFVFTSSLSAGASGAIFGCFGALLFVGIIHPKMFFRTMGANILVL 320
Query: 194 IAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLL 227
I INLA+G +P +DN HIGG + GFL V+ L
Sbjct: 321 IGINLAIGFTIPGIDNAGHIGGLIGGFLASAVVHL 355
>gi|330818784|ref|XP_003291518.1| hypothetical protein DICPUDRAFT_49886 [Dictyostelium purpureum]
gi|325078290|gb|EGC31949.1| hypothetical protein DICPUDRAFT_49886 [Dictyostelium purpureum]
Length = 202
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 98/216 (45%), Gaps = 41/216 (18%)
Query: 113 EHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG------- 165
+ + WR + I+LH G+ H L NM + + +G++LE+ +G R+ +YLL G
Sbjct: 3 QGEWWRFFSPIFLHVGIFHYLMNMATQLRVGMQLERAYGGHRIVPIYLLCGVMGNLCSAI 62
Query: 166 --------GAYYLLFLFNAVSLLVL------LAAALL---TLVVIIAINLAVGI-LPHVD 207
GA +F F V L L LA L TL I + AVG+ LP VD
Sbjct: 63 MLPQSVQVGASGAIFGFLGVLLADLIRNWGVLARPYLNCGTLAFTIITSFAVGLFLPGVD 122
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
N+AH GGF+ G L G++ L + R + +L VA+ L +
Sbjct: 123 NYAHFGGFIMGILTGWIFL---------------PSLTPKRAIGKRLLLLFVAIPLTVGL 167
Query: 268 FTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
F ++ ++ + ++ C C YL+C+ W C N
Sbjct: 168 FVALFIVFYKNISPSEWCYGCKYLTCLEFLSW-CNN 202
>gi|190360185|sp|B0VX73.1|RHDF1_CALJA RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|167427357|gb|ABZ80332.1| rhomboid family 1 (predicted) [Callithrix jacchus]
Length = 855
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q V +Q V + L+++ +
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV------FQVVFLGLLAGLVVLFYVY 825
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ C WC +L+C+P + C
Sbjct: 826 PV-----------RCEWCEFLTCIPFTDKFCEK 847
>gi|375009531|ref|YP_004983164.1| Rhomboid [Geobacillus thermoleovorans CCB_US3_UF5]
gi|359288380|gb|AEV20064.1| Rhomboid [Geobacillus thermoleovorans CCB_US3_UF5]
Length = 389
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 54/199 (27%)
Query: 44 MFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLG 103
+F+V VA+F+V W GG NP L G
Sbjct: 187 LFIVVQVAMFLVL---------EWSGG----------------STNP------DVLIHYG 215
Query: 104 ALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG 163
A +++ ++ + WRL+T ++LH G +HLL N L+L ++GI +E+ +G +R F+Y+ +G
Sbjct: 216 A-KFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 274
Query: 164 FGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGI 202
F GA + L F V + + ++ +I +NL G+
Sbjct: 275 FFGALASFLFTPSLSAGASGAIFGLFGALLYFGTVYRHLFFRTMGMNVISLIIVNLLFGL 334
Query: 203 L-PHVDNFAHIGGFMAGFL 220
L P +DN HIGG + GFL
Sbjct: 335 LVPGIDNAGHIGGLVGGFL 353
>gi|56420981|ref|YP_148299.1| hypothetical protein GK2446 [Geobacillus kaustophilus HTA426]
gi|56380823|dbj|BAD76731.1| hypothetical conserved protein [Geobacillus kaustophilus HTA426]
Length = 390
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 54/199 (27%)
Query: 44 MFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLG 103
+F+V VA+F+V W GG NP L G
Sbjct: 188 LFIVVQVAMFLVL---------EWSGG----------------STNP------DVLIHYG 216
Query: 104 ALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG 163
A +++ ++ + WRL+T ++LH G +HLL N L+L ++GI +E+ +G +R F+Y+ +G
Sbjct: 217 A-KFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 275
Query: 164 FGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGI 202
F GA + L F V + + ++ +I +NL G+
Sbjct: 276 FFGALASFLFTPSLSAGASGAIFGLFGALLYFGTVYRHLFFRTMGMNVISLIIVNLLFGL 335
Query: 203 L-PHVDNFAHIGGFMAGFL 220
L P +DN HIGG + GFL
Sbjct: 336 LVPGIDNAGHIGGLVGGFL 354
>gi|403273152|ref|XP_003928385.1| PREDICTED: inactive rhomboid protein 1 [Saimiri boliviensis
boliviensis]
Length = 852
Score = 67.0 bits (162), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 649 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 708
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 709 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 768
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q V +Q V + L+++ +
Sbjct: 769 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV------FQVVFLGLLAGLVVLFYVY 822
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 823 PV-----------RCEWCEFLTCIPFTDKFC 842
>gi|159475008|ref|XP_001695615.1| rhomboid-like protein [Chlamydomonas reinhardtii]
gi|158275626|gb|EDP01402.1| rhomboid-like protein [Chlamydomonas reinhardtii]
Length = 374
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 50/184 (27%), Positives = 83/184 (45%), Gaps = 28/184 (15%)
Query: 74 VARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLL 133
V ++ + L +NPL GP + + LG + R+V ++Q WRLIT ++ +AG IHL
Sbjct: 51 VGLYMVQWQVADLADNPLLGPGNVGVINLGGTDTQRIVDKYQYWRLITTLFYNAGAIHLT 110
Query: 134 ANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY------------------------ 169
AN+ G L +QF V F++ +G G +
Sbjct: 111 ANLGMTWTFGHFLVRQFSPFIVVFIWFAAGLAGVIFSANIGSENRTAGASAPAFALAGAA 170
Query: 170 -LLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAG--FLLGFVLL 226
++ + LA+A++ + I+ +N +G P VDN + F+ G LGF+L+
Sbjct: 171 TMMLVVRWRKFTWHLASAVV-VCFIVGVNTFIGATPFVDNSGNTAAFVFGGVLCLGFMLI 229
Query: 227 LRPQ 230
R Q
Sbjct: 230 RRRQ 233
>gi|347826752|emb|CCD42449.1| similar to rhomboid family membrane protein [Botryotinia
fuckeliana]
Length = 547
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG-------- 165
Q +R I ++LHAG+IH+ NML + +G +E G +R VY+ SG FG
Sbjct: 287 QWYRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIRYFLVYISSGIFGFILGGNFA 346
Query: 166 -------GAYYLLFLF-------------NAVSLLVLLAAALLTLVVIIAINLAVGILPH 205
GA LF VS + LA +L +V I+ +G+LP
Sbjct: 347 ATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKELAFIMLDIV----ISFVLGLLPG 402
Query: 206 VDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERH--QLPAQARVKSR------HNPY 252
+DNF+HIGGF+ G +LG +L LR + G ++ +P +A R NP
Sbjct: 403 LDNFSHIGGFLMGLVLGLSILRSPNSLRMRTGQSDPPYAPVPTKASQGDRGIVSLFKNPS 462
Query: 253 QY-------------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSC 293
+ V + +LL+ F V +R C WC YLSC
Sbjct: 463 GFFKGRKPAWWAWLLLRLAALVFVFIVFILLLNNFYV-----YRKT-----CGWCKYLSC 512
Query: 294 VPTSKW 299
+ + W
Sbjct: 513 INVNNW 518
>gi|154305263|ref|XP_001553034.1| hypothetical protein BC1G_08926 [Botryotinia fuckeliana B05.10]
Length = 547
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/246 (28%), Positives = 103/246 (41%), Gaps = 75/246 (30%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG-------- 165
Q +R I ++LHAG+IH+ NML + +G +E G +R VY+ SG FG
Sbjct: 287 QWYRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIRYFLVYISSGIFGFILGGNFA 346
Query: 166 -------GAYYLLFLF-------------NAVSLLVLLAAALLTLVVIIAINLAVGILPH 205
GA LF VS + LA +L +V I+ +G+LP
Sbjct: 347 ATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKELAFIMLDIV----ISFVLGLLPG 402
Query: 206 VDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERH--QLPAQARVKSR------HNPY 252
+DNF+HIGGF+ G +LG +L LR + G ++ +P +A R NP
Sbjct: 403 LDNFSHIGGFLMGLVLGLSILRSPNSLRMRTGQSDPPYAPVPTKASQGDRGIVSLFKNPS 462
Query: 253 QY-------------------VLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSC 293
+ V + +LL+ F V +R C WC YLSC
Sbjct: 463 GFFKGRKPAWWAWLLLRLAALVFVFIVFILLLNNFYV-----YRKT-----CGWCKYLSC 512
Query: 294 VPTSKW 299
+ + W
Sbjct: 513 INVNNW 518
>gi|71795631|ref|NP_001025205.1| inactive rhomboid protein 1 [Rattus norvegicus]
gi|123781648|sp|Q499S9.1|RHDF1_RAT RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|71121786|gb|AAH99777.1| Rhomboid 5 homolog 1 (Drosophila) [Rattus norvegicus]
gi|149052201|gb|EDM04018.1| rhomboid family 1 (Drosophila) [Rattus norvegicus]
Length = 856
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + I V L + +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQAVFLGLLAGL 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 820 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 846
>gi|332844857|ref|XP_510701.3| PREDICTED: inactive rhomboid protein 1 [Pan troglodytes]
gi|410226938|gb|JAA10688.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410253062|gb|JAA14498.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410292752|gb|JAA24976.1| rhomboid 5 homolog 1 [Pan troglodytes]
gi|410338761|gb|JAA38327.1| rhomboid 5 homolog 1 [Pan troglodytes]
Length = 855
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + +Q V + L+++ +
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII------FQVVFLGLLAGLVVLFYVY 825
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 826 PV-----------RCEWCEFLTCIPFTDKFC 845
>gi|376261459|ref|YP_005148179.1| hypothetical protein [Clostridium sp. BNL1100]
gi|373945453|gb|AEY66374.1| putative membrane protein [Clostridium sp. BNL1100]
Length = 519
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 44/206 (21%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L+ GA + + ++ E Q WR ++LHA ++HL N S+ IG ++E+ FG R +
Sbjct: 214 LEPFGA-KVNNLIMEGQYWRFFAPMFLHADIVHLAVNCYSIYIIGSQVEKIFGRGRFLAI 272
Query: 159 YLLSGF-GGAYYLLFLFNAV-----SLLVLLAAAL---------------LTLVVIIAIN 197
Y +SGF G A F N+ ++ L+ A L + L+ ++ IN
Sbjct: 273 YFVSGFIGSAASFAFSLNSSVGASGAIFGLVGAMLYFSLRRPALLKSSYGVNLITMLVIN 332
Query: 198 LAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVL 256
LA G + +DN AHIGGF+ GFL + + + ER+ + +L
Sbjct: 333 LAYGFMNKRIDNHAHIGGFVGGFLTTAAV-----YSYQERNG--------------KTLL 373
Query: 257 CIVALVLLIVGFTVGLVMLFRGENGN 282
+LL+ VG MLF G N +
Sbjct: 374 KKATSILLVAAIAVG--MLFYGFNND 397
>gi|190341097|ref|NP_071895.3| inactive rhomboid protein 1 [Homo sapiens]
gi|426380501|ref|XP_004056901.1| PREDICTED: inactive rhomboid protein 1-like [Gorilla gorilla
gorilla]
gi|190360226|sp|Q96CC6.2|RHDF1_HUMAN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Epidermal growth factor receptor-related protein;
AltName: Full=Rhomboid 5 homolog 1; AltName:
Full=Rhomboid family member 1; AltName: Full=p100hRho
gi|66350797|emb|CAI95608.1| rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
gi|119606282|gb|EAW85876.1| rhomboid 5 homolog 1 (Drosophila), isoform CRA_d [Homo sapiens]
gi|158255790|dbj|BAF83866.1| unnamed protein product [Homo sapiens]
Length = 855
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + +Q V + L+++ +
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII------FQVVFLGLLAGLVVLFYVY 825
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 826 PV-----------RCEWCEFLTCIPFTDKFC 845
>gi|426201783|gb|EKV51706.1| hypothetical protein AGABI2DRAFT_62207 [Agaricus bisporus var.
bisporus H97]
Length = 377
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 76/292 (26%), Positives = 113/292 (38%), Gaps = 91/292 (31%)
Query: 81 LSFEPLKENPLFGPSSSTLQKLGAL-------------------------EWDRVV---- 111
+S +P+ NP+FGPSSS L LGA DR
Sbjct: 78 ISLKPVV-NPMFGPSSSALINLGARYPACMKLVKDIPPTLLQPCLNNTANPPDRFCTTEE 136
Query: 112 ----------HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
Q +R IT I+LHAG+IH L NML F+ ++E++ G Y
Sbjct: 137 LCGFGGFHGEEPSQWFRFITPIFLHAGIIHFLLNMLGQWFLSAQIEREMGSAGFIITYFA 196
Query: 162 SG-----FGGAYYLLFLFNAVSLLVLLAAALLTLVVIIA--------------------I 196
+G GG + L+ + + + ++ +T V +IA I
Sbjct: 197 AGIFGNVLGGNFALVGIPSVGASGAIMGTLAVTWVDLIAHWKYHYRPVRQLIFMFIELLI 256
Query: 197 NLAVGILPHVDNF----------AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVK 246
++A+G +P +F AHIGGF+ G L+G V V
Sbjct: 257 SIAIGYIP-CKSFSSCPYSPCLLAHIGGFVMGLLVGIVFY--------------PIISVT 301
Query: 247 SRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
RH + + A+ L ++ F V L F + C+ C YLSC+PTS
Sbjct: 302 KRHRIISWTFKLAAIPLAVILFVV-LTRNFYTSDPYAACTGCRYLSCIPTSS 352
>gi|256843575|ref|ZP_05549063.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256850051|ref|ZP_05555481.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|262047339|ref|ZP_06020296.1| membrane-associated serine protease [Lactobacillus crispatus
MV-3A-US]
gi|293381863|ref|ZP_06627832.1| peptidase, S54 (rhomboid) family protein [Lactobacillus crispatus
214-1]
gi|423319243|ref|ZP_17297119.1| hypothetical protein HMPREF9250_00309 [Lactobacillus crispatus
FB049-03]
gi|423320787|ref|ZP_17298659.1| hypothetical protein HMPREF9249_00659 [Lactobacillus crispatus
FB077-07]
gi|256614995|gb|EEU20196.1| conserved hypothetical protein [Lactobacillus crispatus 125-2-CHN]
gi|256713023|gb|EEU28014.1| conserved hypothetical protein [Lactobacillus crispatus MV-1A-US]
gi|260572313|gb|EEX28876.1| membrane-associated serine protease [Lactobacillus crispatus
MV-3A-US]
gi|290921584|gb|EFD98617.1| peptidase, S54 (rhomboid) family protein [Lactobacillus crispatus
214-1]
gi|405589376|gb|EKB62943.1| hypothetical protein HMPREF9250_00309 [Lactobacillus crispatus
FB049-03]
gi|405599039|gb|EKB72221.1| hypothetical protein HMPREF9249_00659 [Lactobacillus crispatus
FB077-07]
Length = 228
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 83/157 (52%), Gaps = 25/157 (15%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
+++ L K+GA+ VV HQ WRL T +LH G++HL++N + + ++G +E G V
Sbjct: 36 ENTNVLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGIMHLVSNAIIIYYMGQYMEPLMGHV 95
Query: 154 RVGFVYLLSGFGG-----------------AYYLLFLFNAVSLLVL--LAAALLTLV--- 191
R YLL+G GG + L LF A++ + L L ++ +
Sbjct: 96 RFLVTYLLAGVGGNLMSLAFSADRGLSAGASTALFGLFGAMTAIGLRNLHNPMIAFLGRQ 155
Query: 192 --VIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
V+ INLA+ I +P +D + HIGG +AGFLL +L
Sbjct: 156 AFVLALINLALDIFVPGIDIWGHIGGLIAGFLLAIIL 192
>gi|261417690|ref|YP_003251372.1| rhomboid family protein [Geobacillus sp. Y412MC61]
gi|319767503|ref|YP_004133004.1| rhomboid family protein [Geobacillus sp. Y412MC52]
gi|261374147|gb|ACX76890.1| Rhomboid family protein [Geobacillus sp. Y412MC61]
gi|317112369|gb|ADU94861.1| Rhomboid family protein [Geobacillus sp. Y412MC52]
Length = 386
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 54/199 (27%)
Query: 44 MFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLG 103
+F+V VA+F+V W GG NP L G
Sbjct: 184 LFIVVQVAMFLVL---------EWSGG----------------STNP------DVLIHYG 212
Query: 104 ALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG 163
A +++ ++ + WRL+T ++LH G +HLL N L+L ++GI +E+ +G +R F+Y+ +G
Sbjct: 213 A-KFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 271
Query: 164 FGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGI 202
F GA + L F V + + ++ +I +NL G+
Sbjct: 272 FFGALASFLFTPSLSAGASGAIFGLFGALLYFGTVYRHLFFRTMGMNVISLIIVNLLFGL 331
Query: 203 L-PHVDNFAHIGGFMAGFL 220
L P +DN HIGG + GFL
Sbjct: 332 LVPGIDNAGHIGGLVGGFL 350
>gi|15680161|gb|AAH14425.1| Rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
Length = 855
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + +Q V + L+++ +
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII------FQVVFLGLLAGLVVLFYVY 825
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 826 PV-----------RCEWCEFLTCIPFTDKFC 845
>gi|300812773|ref|ZP_07093172.1| peptidase, S54 family [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|313124161|ref|YP_004034420.1| membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|422844075|ref|ZP_16890785.1| S54 family peptidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
gi|300496246|gb|EFK31369.1| peptidase, S54 family [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|312280724|gb|ADQ61443.1| Membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ND02]
gi|325685831|gb|EGD27902.1| S54 family peptidase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 223
Score = 67.0 bits (162), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+S L K+GA+ VV E Q WRL T +LH G++H+ +N + + +IG E FG
Sbjct: 31 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 90
Query: 154 RVGFVYLLSGFGGAYY-----------------LLFLFNAV----------SLLVLLAAA 186
R +YLLSG GG+ L LF A+ +LL L
Sbjct: 91 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGAMTCTGFKDKDNTLLSFLGRQ 150
Query: 187 LLTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
L L V INL + + +P VD H+GG + G LL +L G+ + +L A A
Sbjct: 151 ALALAV---INLVLDVFMPDVDILGHVGGLITGALLAVILGDATYKGYGKGGRLLAAA 205
>gi|10438710|dbj|BAB15318.1| unnamed protein product [Homo sapiens]
Length = 855
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + +Q V + L+++ +
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII------FQVVFLGLLAGLVVLFYVY 825
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 826 PV-----------RCEWCEFLTCIPFTDKFC 845
>gi|386284983|ref|ZP_10062202.1| hypothetical protein SULAR_07038 [Sulfurovum sp. AR]
gi|385344386|gb|EIF51103.1| hypothetical protein SULAR_07038 [Sulfurovum sp. AR]
Length = 226
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 78/177 (44%), Gaps = 26/177 (14%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
F L L L +GAL V + + WRL+T ++LH G+ HLL NM SL +
Sbjct: 24 FSALLSQSLSDMDMQVLVDMGALFGPLTVLKGEWWRLLTAMFLHGGMTHLLMNMFSLYLV 83
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGAYYLLFL----------------FNAVSLLVL---- 182
G E F +Y SG G L++ F A++ L
Sbjct: 84 GRGAEMYFDTKSYLSIYFFSGIIGGLVSLYIHPVSVGVGASGAIFGVFGALAGFFLAHRE 143
Query: 183 -----LAAALLTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGW 233
A + +IIAINL +G +P +D AHIGG + GF+ GFVL P++ W
Sbjct: 144 KIASHTKAFMKDFSIIIAINLVIGFSIPSIDVSAHIGGLIVGFIGGFVLSKDPKWIW 200
>gi|297529385|ref|YP_003670660.1| rhomboid family protein [Geobacillus sp. C56-T3]
gi|297252637|gb|ADI26083.1| Rhomboid family protein [Geobacillus sp. C56-T3]
Length = 386
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 90/199 (45%), Gaps = 54/199 (27%)
Query: 44 MFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLG 103
+F+V VA+F+V W GG NP L G
Sbjct: 184 LFIVVQVAMFLVL---------EWSGG----------------STNP------DVLIHYG 212
Query: 104 ALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG 163
A +++ ++ + WRL+T ++LH G +HLL N L+L ++GI +E+ +G +R F+Y+ +G
Sbjct: 213 A-KFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSLRFLFIYVTAG 271
Query: 164 FGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGI 202
F GA + L F V + + ++ +I +NL G+
Sbjct: 272 FFGALASFLFTPSLSAGASGAIFGLFGALLYFGTVYRHLFFRTMGMNVISLIIVNLLFGL 331
Query: 203 L-PHVDNFAHIGGFMAGFL 220
L P +DN HIGG + GFL
Sbjct: 332 LVPGIDNAGHIGGLVGGFL 350
>gi|397476068|ref|XP_003809433.1| PREDICTED: inactive rhomboid protein 1 [Pan paniscus]
Length = 876
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 673 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 732
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 733 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 792
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + +Q V + L+++ +
Sbjct: 793 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII------FQVVFLGLLAGLVVLFYVY 846
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 847 PV-----------RCEWCEFLTCIPFTDKFC 866
>gi|281183140|ref|NP_001162285.1| inactive rhomboid protein 1 [Papio anubis]
gi|190360187|sp|A9L8T6.1|RHDF1_PAPAN RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|160904112|gb|ABX52099.1| rhomboid 5 homolog 1 (predicted) [Papio anubis]
Length = 855
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + I +V L + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQVVFLGLLAGL 818
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 819 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 845
>gi|297697614|ref|XP_002825944.1| PREDICTED: inactive rhomboid protein 1 [Pongo abelii]
Length = 855
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + I +V L + +
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQVVFLGLLAGL 818
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 819 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 845
>gi|426380485|ref|XP_004056893.1| PREDICTED: inactive rhomboid protein 1-like [Gorilla gorilla
gorilla]
Length = 876
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 673 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 732
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 733 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 792
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + +Q V + L+++ +
Sbjct: 793 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII------FQVVFLGLLAGLVVLFYVY 846
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 847 PV-----------RCEWCEFLTCIPFTDKFC 866
>gi|260817587|ref|XP_002603667.1| hypothetical protein BRAFLDRAFT_128681 [Branchiostoma floridae]
gi|229288989|gb|EEN59678.1| hypothetical protein BRAFLDRAFT_128681 [Branchiostoma floridae]
Length = 531
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 93/231 (40%), Gaps = 61/231 (26%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAY----YL 170
Q WR + WLHAG+IHLL + +G+R+E+ G VR+ +YL+ G GG YL
Sbjct: 310 QWWRWLLSPWLHAGLIHLLLVVTVQCIVGVRIERMVGGVRLAIIYLICGAGGNLMKNIYL 369
Query: 171 L-----FLFNAVSLLVLL---------AAALLTLVVIIAINL------------------ 198
FL N + + AAA L+ + L
Sbjct: 370 TVSTKSFLLNPMQTGAVFSPYTPQMGGAAAACGLLGCACVELLQAWRLVPRALCKLLTLL 429
Query: 199 -------AVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG-WAERHQLPAQARVKSRHN 250
G LP VDN+A +GGF+ G L V L G W R
Sbjct: 430 TVLTVLFMAGTLPLVDNWAQLGGFVFGLLSALVFLPYIVLGRWDARR------------- 476
Query: 251 PYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ L ++ V+L++ + V L+M + + D C C + +C+P + C
Sbjct: 477 --KRCLVVLGFVMLVLMYAVLLMMFYYVQ--GDFCPACKHFNCIPYTTDAC 523
>gi|163815124|ref|ZP_02206505.1| hypothetical protein COPEUT_01280 [Coprococcus eutactus ATCC 27759]
gi|158449533|gb|EDP26528.1| peptidase, S54 family [Coprococcus eutactus ATCC 27759]
Length = 333
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 76/148 (51%), Gaps = 27/148 (18%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAY- 168
+ + Q +R +T ++ H G+ HLL NM+ L+ +G R+E G + VY+++G A+
Sbjct: 178 ISEKRQYYRFLTSMFTHFGITHLLGNMVILIALGARIENIIGRLNYVIVYIVTGLAAAFA 237
Query: 169 -YLLF---------------LFNAVSLLVLLA---------AALLTLVVIIAINLAVGIL 203
Y+ F +F + +LV++A +L+ ++++ + L G++
Sbjct: 238 SYINFFCNDIYDYSAGASGAIFGLLGVLVVIAFYNKGRVKDLSLMNMIILFILTLVDGLM 297
Query: 204 PH-VDNFAHIGGFMAGFLLGFVLLLRPQ 230
+DN AH GFMAG L G VLLL Q
Sbjct: 298 SEGIDNVAHAAGFMAGILAGIVLLLVNQ 325
>gi|190195531|gb|ACE73629.1| rhomboid family 1 (predicted) [Sorex araneus]
Length = 868
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 665 QFYRLWLSLFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 724
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 725 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 784
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q V +Q V + L+++ +
Sbjct: 785 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV------FQVVFLGLLAGLVVLFYFY 838
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 839 PV-----------RCEWCEFLTCIPFTDKFC 858
>gi|373859031|ref|ZP_09601763.1| Rhomboid family protein [Bacillus sp. 1NLA3E]
gi|372451122|gb|EHP24601.1| Rhomboid family protein [Bacillus sp. 1NLA3E]
Length = 522
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 78/153 (50%), Gaps = 23/153 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+S+TL K GA +++ ++ E Q WR +T I++H G +HL+ N ++L +IG +E+ +G R
Sbjct: 207 NSTTLIKFGA-KFNPLIIEGQWWRFLTPIFIHIGFLHLIMNSIALYYIGPLVERIYGNFR 265
Query: 155 VGFVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVI 193
+YL +GF G + L F + + + ++V+
Sbjct: 266 FILIYLFAGFTGVLASFAFSANLSAGASGAIFGCFGALLYFGLIYPKLFFRTMGMNILVV 325
Query: 194 IAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
I +NLA G + +DN HIGG + GFL +L
Sbjct: 326 IGLNLAFGFSMQGIDNAGHIGGLIGGFLASGIL 358
>gi|251778447|ref|ZP_04821367.1| rhomboid family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243082762|gb|EES48652.1| rhomboid family protein [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 321
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 81/153 (52%), Gaps = 24/153 (15%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L LGA +++ ++++ + WRL+TC +LH G+ HLL NM +L +G ++E+ FG +
Sbjct: 166 NVLLNLGA-KYNPLIYQGEVWRLVTCAFLHGGITHLLFNMYALYILGPQVEKIFGIKKYL 224
Query: 157 FVYLLS------------------GFGGAYY----LLFLFNAVSLLVLLAAALLTLVVII 194
+Y +S G GA + + +F+ + +L L+ +I
Sbjct: 225 IIYFVSAITSSSLGVALNKNTISVGASGAIFGLLGAILVFSIKQRHKVEKEYILNLIGVI 284
Query: 195 AINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLL 226
+NL +G + ++DN HIGGF+ G ++ +L+
Sbjct: 285 ILNLLIGFNISNIDNLGHIGGFLGGVIMARILI 317
>gi|223994881|ref|XP_002287124.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976240|gb|EED94567.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 866
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 64/141 (45%), Gaps = 25/141 (17%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA D ++ Q RLIT I+LH G+ HL+AN SL +G+ +E+ FG R YLLS
Sbjct: 559 GAKRSDLLLEGRQLHRLITPIFLHGGIGHLMANSYSLKSMGMNIERSFGRSRFVATYLLS 618
Query: 163 G----------------------FG--GAYYLLFLFNAVSLLVLLAAALLTLVVIIAINL 198
G FG GAYY N L+ I NL
Sbjct: 619 GIMGNVVSAIQSPNPAVGASGAIFGLVGAYYTFLSRNQDLFGYSGQRQKSALIETIGFNL 678
Query: 199 AVGIL-PHVDNFAHIGGFMAG 218
+G+ P +DN+ HIGGF+ G
Sbjct: 679 LLGMTNPMIDNWGHIGGFIGG 699
>gi|190360186|sp|B1MT31.1|RHDF1_CALMO RecName: Full=Inactive rhomboid protein 1; Short=iRhom1; AltName:
Full=Rhomboid family member 1
gi|169246092|gb|ACA51068.1| rhomboid family 1 (predicted) [Callicebus moloch]
Length = 855
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 93/213 (43%), Gaps = 41/213 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q V +Q V + L+++ +
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV------FQVVFLGLLAGLVVLFYFY 825
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ C WC +L+C+P + C
Sbjct: 826 PV-----------RCEWCEFLTCIPFTDKFCEK 847
>gi|451821413|ref|YP_007457614.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
gi|451787392|gb|AGF58360.1| rhomboid protease GluP [Clostridium saccharoperbutylacetonicum
N1-4(HMT)]
Length = 332
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 80/146 (54%), Gaps = 24/146 (16%)
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
LF + L GA +++ ++ + Q WRL+TC +LH+G+IH+ NM SL IG ++EQ
Sbjct: 164 SLFDIDTKVLLDYGA-KYNALIDKGQVWRLLTCAFLHSGLIHIACNMYSLYIIGPQIEQI 222
Query: 150 FGFVRVGFVYLLSGFGGAYYLLFLF-NAVS----------LLVLLAAALL---------- 188
+G ++ +Y++S + F+ +++S + LLA A +
Sbjct: 223 YGTLKYLIIYIVSSITASALSYFMSPDSISVGASGAIFGLMGALLAFAFIERNKIQKKYM 282
Query: 189 -TLVVIIAINLAVGI-LPHVDNFAHI 212
+L+ +I INL +G+ + ++DNFAHI
Sbjct: 283 SSLMQVIIINLFIGLSISNIDNFAHI 308
>gi|380027526|ref|XP_003697473.1| PREDICTED: inactive rhomboid protein 1-like [Apis florea]
Length = 1022
Score = 66.2 bits (160), Expect = 2e-08, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS------------ 162
Q +RL T ++LHAG++HL +L F+ LE+ G +R+ +Y +
Sbjct: 815 QFYRLFTTMFLHAGILHLSITLLVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 874
Query: 163 ------GFGGAYYLLF------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
G GA++ L + + +L AL L+ ++ L +GILP VDN+A
Sbjct: 875 PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRALSKLIFVLIGLLILGILPWVDNYA 934
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ GF+ GFL + LL FG +R + + L + ++L++V FT+
Sbjct: 935 HLFGFIFGFLAAYALLPFISFGQYDRRR--------------KIWLIWICMILIVVLFTL 980
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L + + C C +C+P ++ C +
Sbjct: 981 LLALFYNVPVY--ECEVCKLFNCIPFTRDFCAS 1011
>gi|104774327|ref|YP_619307.1| hypothetical protein Ldb1479 [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|103423408|emb|CAI98279.1| Conserved hypothetical membrane protein [Lactobacillus delbrueckii
subsp. bulgaricus ATCC 11842]
Length = 215
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/178 (33%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+S L K+GA+ VV E Q WRL T +LH G++H+ +N + + +IG E FG
Sbjct: 23 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 82
Query: 154 RVGFVYLLSGFGGAYY-----------------LLFLFNAV----------SLLVLLAAA 186
R +YLLSG GG+ L LF A+ +LL L
Sbjct: 83 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGAMTCAGFKDKDNTLLSFLGRQ 142
Query: 187 LLTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
L L V INL + + +P VD H+GG + G LL +L G+ + +L A A
Sbjct: 143 ALALAV---INLVLDVFMPDVDILGHVGGLITGALLAVILGDATYKGYGKGGRLLAAA 197
>gi|448238728|ref|YP_007402786.1| rhomboid family protein [Geobacillus sp. GHH01]
gi|445207570|gb|AGE23035.1| rhomboid family protein [Geobacillus sp. GHH01]
Length = 389
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 89/199 (44%), Gaps = 54/199 (27%)
Query: 44 MFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLG 103
+F+V VA+F+V W GG NP L G
Sbjct: 187 LFIVVQVAMFLVL---------EWSGG----------------STNP------DVLIHYG 215
Query: 104 ALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG 163
A +++ ++ + WRL+T ++LH G +HLL N L+L ++GI +E+ +G R F+Y+ +G
Sbjct: 216 A-KFNPLIEAGEWWRLLTPMFLHIGFLHLLTNTLALYYLGITVERLYGSFRFLFIYVTAG 274
Query: 164 FGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGI 202
F GA + L F V + + ++ +I +NL G+
Sbjct: 275 FFGALASFLFTPSLSAGASGAIFGLFGALLYFGTVYRHLFFRTMGMNVISLIIVNLLFGL 334
Query: 203 L-PHVDNFAHIGGFMAGFL 220
L P +DN HIGG + GFL
Sbjct: 335 LVPGIDNAGHIGGLVGGFL 353
>gi|312110225|ref|YP_003988541.1| Rhomboid protease [Geobacillus sp. Y4.1MC1]
gi|311215326|gb|ADP73930.1| Rhomboid protease [Geobacillus sp. Y4.1MC1]
Length = 389
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 80/164 (48%), Gaps = 23/164 (14%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ L K GA +++ ++ + WR T I+LH G +HLL N +L ++G+ +E+ +G R
Sbjct: 208 NPDVLIKYGA-KFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWR 266
Query: 155 VGFVYLLSGF-----------------GGAYYLLF----LFNAVSLLVLLAAALLTLVVI 193
F+Y +GF GA + LF F V + L ++ +
Sbjct: 267 FFFIYFTAGFFGTLGSFLFTASLSAGASGAIFGLFGALLYFGTVYRHLFLQTIGTNIIGL 326
Query: 194 IAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
I INL G I+P +DN HIGG + G+L ++ L F W ++
Sbjct: 327 IVINLVFGMIVPGIDNAGHIGGLIGGYLAAGIVHLPNHFDWKKQ 370
>gi|344292280|ref|XP_003417856.1| PREDICTED: inactive rhomboid protein 1-like [Loxodonta africana]
Length = 856
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILASPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + I V L + ++
Sbjct: 773 HISGFVSGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQAVFLGLLGSL 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 820 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 846
>gi|384485233|gb|EIE77413.1| hypothetical protein RO3G_02117 [Rhizopus delemar RA 99-880]
Length = 358
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 65/126 (51%), Gaps = 25/126 (19%)
Query: 113 EHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF-------- 164
HQ +RLI I++HAGVIH L NML+ + +G+ LE+ G R +Y+ SG
Sbjct: 215 PHQSFRLILPIFMHAGVIHFLMNMLTHLRLGVDLERALGTPRYVVLYMASGIYGFVLSAM 274
Query: 165 -----------GGAYYLLFLFNAVSLLV------LLAAALLTLVVIIAINLAVGILPHVD 207
GA + L + + +LV L++L+V I+L +G+LP +D
Sbjct: 275 LSQNLSASTGCSGALFGLIGYMFIDVLVNWKVLPHPVRDLMSLLVSTIISLVLGLLPGLD 334
Query: 208 NFAHIG 213
NFAHIG
Sbjct: 335 NFAHIG 340
>gi|47220058|emb|CAG12206.1| unnamed protein product [Tetraodon nigroviridis]
Length = 894
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 97/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G++R+ +Y++SG G A +L
Sbjct: 691 QFYRLWLSLFLHAGILHCLVSVAFQMTILRDLEKLAGWLRISIIYIISGITGNLASAIFL 750
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A + L+ ++ A G+LP +DNFA
Sbjct: 751 PYRAEVGPAGSQFGILACLFVELFQSWQILAQPWRAFIKLLCVVLFLFAFGLLPWIDNFA 810
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++GF L F L FG + + Q I+ +L+ VG
Sbjct: 811 HICGFISGFFLSFAFLPYISFGRMDLCRKRCQ---------------IIVFLLVFVGLFS 855
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC L+C+P + C
Sbjct: 856 GLVVLFYVYPIK--CEWCELLTCIPFTDKFC 884
>gi|284005108|ref|NP_001164883.1| rhomboid family member 1 [Oryctolagus cuniculus]
gi|218157236|gb|ACK58461.1| rhomboid family 1 (predicted) [Oryctolagus cuniculus]
Length = 856
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ GF++G L F L FG + ++ Q + + LV L + +
Sbjct: 773 HVSGFVSGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIVFQLVFLGLLAGL 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 820 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 846
>gi|149750980|ref|XP_001494786.1| PREDICTED: inactive rhomboid protein 1-like [Equus caballus]
Length = 856
Score = 66.2 bits (160), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q V +Q V + L+++ +
Sbjct: 773 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV------FQAVFLGLLAGLVVLFYFY 826
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 827 PV-----------RCEWCEFLTCIPFTDKFC 846
>gi|366164287|ref|ZP_09464042.1| rhomboid family protein [Acetivibrio cellulolyticus CD2]
Length = 519
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 68/134 (50%), Gaps = 22/134 (16%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AYYLLFLF 174
WR IT I+LHA + HL AN LSL G +E +G + F+YL +G G A ++ +
Sbjct: 228 WRFITPIFLHADLEHLFANSLSLFVFGRIVEGMYGHKKFTFIYLAAGVIGNVASFMFSTY 287
Query: 175 NAV----SLLVLLAAALL---------------TLVVIIAINLAVGIL-PHVDNFAHIGG 214
+ V S+ A L ++++I INLA G P +DNFAH+GG
Sbjct: 288 SGVGASGSIFGFFGALLYLWVENPAAFRRYFGNNILIMIVINLAYGFASPGIDNFAHVGG 347
Query: 215 FMAGFLLGFVLLLR 228
+ GFL ++ L+
Sbjct: 348 LIGGFLTSGIVKLK 361
>gi|66363006|ref|XP_628469.1| rhomboid family membrane associated protease, 7 transmembrane
domain [Cryptosporidium parvum Iowa II]
gi|46229491|gb|EAK90309.1| rhomboid family membrane associated protease, 7 transmembrane
domain [Cryptosporidium parvum Iowa II]
gi|323508507|dbj|BAJ77147.1| cgd7_3020 [Cryptosporidium parvum]
gi|323510219|dbj|BAJ78003.1| cgd7_3020 [Cryptosporidium parvum]
Length = 464
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 36/191 (18%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
LFGP + +GAL+ + +V Q RL WLH G IHL N+ + +GI LE ++
Sbjct: 153 LFGPPPQVVFDMGALDTN-LVRNGQLARLFWSFWLHTGFIHLFINLSCQIILGIILETRW 211
Query: 151 GFVRVGFVYLLSGFGGAYYLLFLF-------NAVSLLVLLAAA---------------LL 188
R +YLL G G L ++ LLA L
Sbjct: 212 VIWRYAILYLLGGISGNLASAVLDPCTISAGSSACFFALLAGIIVLLLENWRNSRWQFLY 271
Query: 189 TLVVIIA--INLAVGILPHVDNFAHIGGFMAGFLLGFVLL---------LRPQFGWAERH 237
L+VIIA I +++ + + DN+AHIGGF+AG L F + LR + ++
Sbjct: 272 VLLVIIASLIGISLSFMSNTDNWAHIGGFVAGLLWSFASMESFSRKSKALRKSIKSSGKN 331
Query: 238 --QLPAQARVK 246
QLP+Q V+
Sbjct: 332 TIQLPSQDNVQ 342
>gi|355756393|gb|EHH60001.1| p100hRho [Macaca fascicularis]
Length = 936
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 44/129 (34%), Positives = 65/129 (50%), Gaps = 11/129 (8%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLS-LVFIGIR------LEQQFGFVRVGFVYLLSGFGG- 166
Q +RL ++LHAG + L A +L LV I + LE+ G+ R+ +YLLSG G
Sbjct: 761 QFYRLWLSLFLHAGQVTLWAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGN 820
Query: 167 ---AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGF 223
A +L + + +L A L+ ++ G+LP +DNFAH GF++G L F
Sbjct: 821 LASAIFLPYRAESWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHTSGFISGLFLSF 880
Query: 224 VLLLRPQFG 232
L FG
Sbjct: 881 AFLPYISFG 889
>gi|227877719|ref|ZP_03995755.1| S54 family peptidase [Lactobacillus crispatus JV-V01]
gi|312984383|ref|ZP_07791722.1| putative small hydrophobic molecule transporter protein
[Lactobacillus crispatus CTV-05]
gi|227862707|gb|EEJ70190.1| S54 family peptidase [Lactobacillus crispatus JV-V01]
gi|310894227|gb|EFQ43310.1| putative small hydrophobic molecule transporter protein
[Lactobacillus crispatus CTV-05]
Length = 228
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 25/157 (15%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
+++ L K+GA+ VV HQ WRL +LH G++HL++N + + ++G +E G V
Sbjct: 36 ENTNVLMKMGAMNNFAVVAGHQWWRLFMAQFLHIGIMHLVSNAIIIYYMGQYMEPLMGHV 95
Query: 154 RVGFVYLLSGFGG-----------------AYYLLFLFNAVSLLVL------LAAALLTL 190
R YLL+G GG + L LF A++ + L + A L
Sbjct: 96 RFLVTYLLAGVGGNLMSLAFSADRGLSAGASTALFGLFGAMTAIGLRNLHNPMIAFLGRQ 155
Query: 191 VVIIA-INLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
++A INLA+ I +P +D + HIGG +AGFLL +L
Sbjct: 156 AFVLALINLALDIFVPGIDIWGHIGGLIAGFLLAIIL 192
>gi|145251413|ref|XP_001397220.1| DHHC zinc finger membrane protein [Aspergillus niger CBS 513.88]
gi|134082753|emb|CAK46736.1| unnamed protein product [Aspergillus niger]
Length = 513
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/274 (24%), Positives = 105/274 (38%), Gaps = 91/274 (33%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I +++H G +H+ N++ + +G+ +E+ G+ R VY+ SG
Sbjct: 237 DDKPEPNQWFRFIIPMFIHTGFVHIGFNLIVQMTMGVDMERMIGWWRYFVVYVASGIWGF 296
Query: 164 -FGGAYY-----------LLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GG Y LF A+ +L LL ++ +++ IA++ +G+
Sbjct: 297 VLGGNYAGQGEASCGCSGALFGILALFILDLLYTWKDRPSPWVEMIIMILGIAVSFVLGL 356
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPY---------- 252
LP +DNFAHIGGF+ G LG LL P + R+ NPY
Sbjct: 357 LPGLDNFAHIGGFIMGLALGLCLLRSPNA---------LRERIGLARNPYVAMSGGAGTP 407
Query: 253 -----QYVLCIVALVLLIVGF-----------TVGLVMLFRGEN---------------- 280
Q V +LV + G + V FRG
Sbjct: 408 TPDDNQKVNTGPSLVDFLKGRRTRTGAGASNNKLNPVNFFRGRKPLWWAWWLVRAGALVA 467
Query: 281 ---------------GNDHCSWCHYLSCVPTSKW 299
+CSWC+ LSC+P + W
Sbjct: 468 VLVGFILLIVDFYKYPKSNCSWCYRLSCLPVNGW 501
>gi|302697719|ref|XP_003038538.1| hypothetical protein SCHCODRAFT_47563 [Schizophyllum commune H4-8]
gi|300112235|gb|EFJ03636.1| hypothetical protein SCHCODRAFT_47563 [Schizophyllum commune H4-8]
Length = 368
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 100/211 (47%), Gaps = 40/211 (18%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG----- 165
+Q +R IT I+LHAG++HL+ NM + V + ++E++ G Y +G FG
Sbjct: 136 EPNQWFRFITPIFLHAGIVHLILNMFAQVTVSAQIEREMGSGGFFLTYFAAGIFGNILGG 195
Query: 166 ----------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHV 206
GA +F AV+ + L A L+ +++ +AI +A+G +P+V
Sbjct: 196 NFALVGIPSVGASGAIFGTIAVTWVDLFAHWKYQYRPVRKLIFMIIELAIGIAIGFIPYV 255
Query: 207 DNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIV 266
DNFAH+GGF+ G L+G + P + K RH ++ + A+ L IV
Sbjct: 256 DNFAHLGGFLLGLLVGTIF-------------YPVISETK-RHKFIMWIFRLAAIPLAIV 301
Query: 267 GFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
F V L F + C C YLSC PT
Sbjct: 302 LFVV-LTRNFYTSDPYASCPGCRYLSCWPTD 331
>gi|295693318|ref|YP_003601928.1| hypothetical protein LCRIS_01456 [Lactobacillus crispatus ST1]
gi|295031424|emb|CBL50903.1| Membrane protein [Lactobacillus crispatus ST1]
Length = 228
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/157 (33%), Positives = 82/157 (52%), Gaps = 25/157 (15%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
+++ L K+GA+ VV HQ WRL +LH G++HL++N + + ++G +E G V
Sbjct: 36 ENTNVLMKMGAMNNFAVVAGHQWWRLFMAQFLHIGIMHLVSNAIIIYYMGQYMEPLMGHV 95
Query: 154 RVGFVYLLSGFGG-----------------AYYLLFLFNAVSLLVL------LAAALLTL 190
R YLL+G GG + L LF A++ + L + A L
Sbjct: 96 RFLVTYLLAGVGGNLMSLAFSADRGLSAGASTALFGLFGAMTAIGLRNLHNPMIAFLGRQ 155
Query: 191 VVIIA-INLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
++A INLA+ I +P +D + HIGG +AGFLL +L
Sbjct: 156 AFVLALINLALDIFVPGIDIWGHIGGLIAGFLLAIIL 192
>gi|385816085|ref|YP_005852476.1| hypothetical protein [Lactobacillus delbrueckii subsp. bulgaricus
2038]
gi|325126122|gb|ADY85452.1| Putative membrane protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 223
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/175 (30%), Positives = 80/175 (45%), Gaps = 25/175 (14%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+S L K+GA+ VV E Q WRL T +LH G++H+ +N + + +IG E FG
Sbjct: 31 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 90
Query: 154 RVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLV---------------------- 191
R +YLLSG GG+ L N ++ + AL L
Sbjct: 91 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGAMTCAGFKDKDNTLLSFLGRQ 150
Query: 192 --VIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
+ INL + + +P VD H+GG + G LL +L G+ + +L A A
Sbjct: 151 AWALAVINLVLDVFMPDVDILGHVGGLITGALLAVILGDATYKGYGKGGRLLAAA 205
>gi|183396440|gb|ACC62115.1| rhomboid family 1 (predicted) [Rhinolophus ferrumequinum]
Length = 856
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 93/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q + +Q V + L+++ +
Sbjct: 773 HISGFVSGLFLSFAFLPYVSFGRFDLYRKRCQILI------FQAVFLGLLAGLVVLFYFY 826
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 827 PV-----------RCEWCEFLTCIPFTDKFC 846
>gi|444727239|gb|ELW67740.1| Inactive rhomboid protein 1 [Tupaia chinensis]
Length = 857
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 83/198 (41%), Gaps = 38/198 (19%)
Query: 109 RVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE-----QQFGFVRVGFVYLLSG 163
R + + GW I I+L +GV N+ S +F+ R E QFG + FV L
Sbjct: 683 RDLEKLAGWHRIAIIYLLSGVT---GNLASAIFLPYRAEVGPAGSQFGILACLFVEL--- 736
Query: 164 FGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGF 223
F + +L A L+ ++ A G+LP +DNFAHI GF++G L F
Sbjct: 737 ----------FQSWQVLARPWRAFFKLLAVVLSLFAFGLLPWIDNFAHISGFISGLFLSF 786
Query: 224 VLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGND 283
L FG + + Y+ I+ ++ + GLV+LF
Sbjct: 787 AFLPYISFG---------------KFDLYRKRCQIIVFQVVFLCLLAGLVVLFYFSPVR- 830
Query: 284 HCSWCHYLSCVPTSKWKC 301
C WC L+C+P + C
Sbjct: 831 -CEWCELLTCIPFTDKFC 847
>gi|297584599|ref|YP_003700379.1| rhomboid protease [Bacillus selenitireducens MLS10]
gi|297143056|gb|ADH99813.1| Rhomboid protease [Bacillus selenitireducens MLS10]
Length = 526
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 95/193 (49%), Gaps = 37/193 (19%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S+ TL + GA ++D + + + WR ++ +++H G +HL N L+L F+G +E+ FG R
Sbjct: 215 STLTLVEFGA-KYDPAILDGEWWRFVSAMFIHIGPLHLFMNSLALFFLGAAVERIFGTGR 273
Query: 155 VGFVYLLSGFGGAYYLLFLFN------AVSLLVLLAAALL----------------TLVV 192
+Y L+G G+ F+FN A + L ALL ++V
Sbjct: 274 FFGIYFLAGLFGS-VASFVFNDNISAGASGAIFGLFGALLYFGVRHKKLFFRTMGMNILV 332
Query: 193 IIAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNP 251
I+ INL G ++P VDN AHIGG + GF+ ++ LPA + KS
Sbjct: 333 ILGINLVFGFVVPMVDNGAHIGGLIGGFIASSIV------------GLPAHKKDKSMIGA 380
Query: 252 YQYVLCIVALVLL 264
+ + ++A +LL
Sbjct: 381 FLTAVILMAGLLL 393
>gi|167763036|ref|ZP_02435163.1| hypothetical protein BACSTE_01401 [Bacteroides stercoris ATCC
43183]
gi|167699376|gb|EDS15955.1| peptidase, S54 family [Bacteroides stercoris ATCC 43183]
Length = 771
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 26/149 (17%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF------------ 164
WR ITC ++H GVIH+L NM +L++IGI LEQ G R+ Y L+G
Sbjct: 399 WRTITCNFIHIGVIHVLMNMYALLYIGIFLEQLIGGRRLISAYFLTGLFSALASLAMHPE 458
Query: 165 ---GGAYYLLFLFNAVSLLVLL----------AAALLTLVVIIAINLAVGILPH-VDNFA 210
GA +F + L L+ + L ++ + NL G +DN A
Sbjct: 459 TISAGASGSIFGLYGIFLSYLVFHHRIEKGQRKSLLYSIGFFVFYNLMSGARAEGIDNAA 518
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQL 239
HIGG ++G +LG + LL +F + L
Sbjct: 519 HIGGLVSGIILGIIYLLTDRFATKKTSTL 547
>gi|67606699|ref|XP_666769.1| F6D8.20 [Cryptosporidium hominis TU502]
gi|54657827|gb|EAL36541.1| F6D8.20 [Cryptosporidium hominis]
Length = 464
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 86/191 (45%), Gaps = 36/191 (18%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
LFGP + +GAL+ + +V Q RL WLH G IHL N+ + +GI LE ++
Sbjct: 153 LFGPPPQVVFDMGALDTN-LVRNGQLARLFWSFWLHTGFIHLFINLSCQIILGIILETRW 211
Query: 151 GFVRVGFVYLLSGFGGAYYLLFLF-------NAVSLLVLLAAA---------------LL 188
R +YLL G G L ++ LLA L
Sbjct: 212 VIWRYAILYLLGGISGNLASAVLDPCTISAGSSACFFALLAGIIVLLLENWRNSRWQFLY 271
Query: 189 TLVVIIA--INLAVGILPHVDNFAHIGGFMAGFLLGFVLL---------LRPQFGWAERH 237
L+VIIA I +++ + + DN+AHIGGF+AG L F + LR + ++
Sbjct: 272 VLLVIIASLIGISLSFMSNTDNWAHIGGFVAGLLWSFASMESFSRKSKTLRKSIKSSGKN 331
Query: 238 --QLPAQARVK 246
QLP+Q V+
Sbjct: 332 TIQLPSQDNVQ 342
>gi|255526224|ref|ZP_05393142.1| Rhomboid family protein [Clostridium carboxidivorans P7]
gi|296185575|ref|ZP_06853984.1| peptidase, S54 (rhomboid) family protein [Clostridium
carboxidivorans P7]
gi|255510064|gb|EET86386.1| Rhomboid family protein [Clostridium carboxidivorans P7]
gi|296049703|gb|EFG89128.1| peptidase, S54 (rhomboid) family protein [Clostridium
carboxidivorans P7]
Length = 323
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 74/139 (53%), Gaps = 23/139 (16%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
LGA + + ++ + +RLITC++LH G++HLL NM +L +G +E+ +G R +Y L
Sbjct: 173 LGA-KVNYLIARGEYYRLITCMFLHGGIMHLLLNMFALYSLGPFIEKIYGKTRYLIIYFL 231
Query: 162 SGFGGAYYLLFLFNAVS------LLVLLAAALL---------------TLVVIIAINLAV 200
SG + + AVS + LL AAL+ +V +I INL +
Sbjct: 232 SGIVSSIFSYMFSTAVSIGASGAIFGLLGAALIFAMKMKDRIGRGFITNIVSVIFINLFM 291
Query: 201 GI-LPHVDNFAHIGGFMAG 218
G + +VDNF H+GG + G
Sbjct: 292 GFSMSNVDNFGHLGGLIGG 310
>gi|424780986|ref|ZP_18207852.1| GlpG membrane protein [Catellicoccus marimammalium M35/04/3]
gi|422842406|gb|EKU26858.1| GlpG membrane protein [Catellicoccus marimammalium M35/04/3]
Length = 200
Score = 65.9 bits (159), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/111 (40%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 73 CVARFLGRLSFE----PLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAG 128
C+ +LG F+ P + P + TL GA EW +VH+ Q WRLIT +++H G
Sbjct: 15 CIFVYLGMCYFQYIYLPKEGIPSQNGQNVTLLTFGA-EWGPLVHQGQWWRLITAMFVHIG 73
Query: 129 VIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-AYYLLFLFNAVS 178
HL N+L+L FIG LE G +R +YLL G GG L F NA+S
Sbjct: 74 FAHLFLNLLTLYFIGPELEFYLGKIRYLLLYLLCGIGGNVVSLFFDGNAIS 124
>gi|433444473|ref|ZP_20409345.1| serine protease of Rhomboid family, contains TPR repeats
[Anoxybacillus flavithermus TNO-09.006]
gi|432001501|gb|ELK22376.1| serine protease of Rhomboid family, contains TPR repeats
[Anoxybacillus flavithermus TNO-09.006]
Length = 517
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 23/148 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
++ TL + GA +++ ++ + + WR T I LH G +HL N +L ++G +E+ +G R
Sbjct: 213 NTLTLIQYGA-KFNPLILQGEWWRFFTPIVLHIGFLHLFMNTFALYYLGSLVEKLYGSFR 271
Query: 155 VGFVYLLSGFGGAYYL---------------------LFLFNAVSLLVLLAAALLTLVVI 193
F+YL +GF G+ L F + + ++ +
Sbjct: 272 FLFIYLFAGFAGSLASFLFSSSVSAGASGAIFGCFGALLYFGKAKPHIFFRTIGMNVITV 331
Query: 194 IAINLAVG-ILPHVDNFAHIGGFMAGFL 220
I INLA G ++P++DN HIGG + GFL
Sbjct: 332 IGINLAFGLVVPNIDNAGHIGGLIGGFL 359
>gi|452991452|emb|CCQ97320.1| putative Rhomboid protease [Clostridium ultunense Esp]
Length = 400
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 83/163 (50%), Gaps = 25/163 (15%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
TL + GA +++ + + WRLIT I+LH+G H+ N ++L ++G+ +E+ +G R
Sbjct: 219 ETLIRFGA-KYNPAIKAGEWWRLITSIFLHSGFFHVALNSIALYYLGLLVERMYGRARFL 277
Query: 157 FVYLLSGFGGAYYLLFLFNAVSL-----LVLLAAALL----------------TLVVIIA 195
+Y ++G G+ + VS+ + L ALL L+ II
Sbjct: 278 LIYFMAGLLGSVASFLYSDTVSVGSSGAIYGLFGALLFFGMRRRDLFFRSFGKDLLFIIG 337
Query: 196 INLAVGIL-PHVDNFAHIGGFMAGFLL--GFVLLLRPQFGWAE 235
+NL + +L P +D +AH+GG + GFL G L P+ GW +
Sbjct: 338 LNLLISVLVPSIDLYAHLGGLVGGFLAAGGTGLPQAPKRGWQQ 380
>gi|361127409|gb|EHK99378.1| putative Inactive rhomboid protein 1 [Glarea lozoyensis 74030]
Length = 302
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 93/217 (42%), Gaps = 37/217 (17%)
Query: 95 SSSTLQKLGALEWDRVVHEHQG---WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
++S++ +GA + +HQ +R I I+LHAG+IH+ NML + +G +E G
Sbjct: 80 ANSSIPGIGAPSGTALEDKHQPDQWFRFIVPIFLHAGIIHIGFNMLLQMTLGREMEMIIG 139
Query: 152 FVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLT---------------------- 189
+R VY+ SG G + L F A + A+ L
Sbjct: 140 SIRYFLVYIASGIFG-FVLGGNFAAEGIASTGASGSLFGILALTLLDLLYHWAERISPWK 198
Query: 190 ----LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+++ IAI+ +G+LP +DNF+HIGGF+ G LG +L P Q P V
Sbjct: 199 DFAFIMLDIAISFVLGLLPGLDNFSHIGGFIMGIALGICILHSPASLQKRIGQDPPYRPV 258
Query: 246 KSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGN 282
+ + A VGF F+G + N
Sbjct: 259 HQSKSDDHLITGTQAFAKAPVGF-------FKGPSKN 288
>gi|429764176|ref|ZP_19296501.1| peptidase, S54 family [Clostridium celatum DSM 1785]
gi|429188574|gb|EKY29452.1| peptidase, S54 family [Clostridium celatum DSM 1785]
Length = 324
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 80/151 (52%), Gaps = 24/151 (15%)
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
TL +GA + + +++ Q WRLITC +LH G+ H+ NM +L IG +E +G ++
Sbjct: 168 TLVIMGA-KVNELINHGQVWRLITCTFLHGGLAHIAFNMYALKIIGSEVEFAYGKIKYIL 226
Query: 158 VYLLSGFGGAYY-LLFLFNAVS------LLVLLAAAL---------------LTLVVIIA 195
+YL S GG+ + +F N++S + L A L + L ++
Sbjct: 227 IYLFSALGGSIFSYIFSPNSISVGASGAIFGLFGAMLVFGVKNRHRIGKNYVINLFKVVI 286
Query: 196 INLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
IN+ +G+ + ++DN HIGG +AG ++ ++
Sbjct: 287 INIFIGVTISNIDNAGHIGGLVAGGIIALLV 317
>gi|296203262|ref|XP_002748805.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Callithrix
jacchus]
Length = 857
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 654 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 713
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ A G+LP +DN A
Sbjct: 714 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPWIDNIA 773
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L G
Sbjct: 774 HIFGFLSGLLLAFAFLPYITFGTSDK---------------YRKRALILVSLLAFAGLFA 818
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+ N W +L+C P + C
Sbjct: 819 GLVLWLYIYPFN--WPWIEHLTCFPFTSRFC 847
>gi|410985425|ref|XP_003999023.1| PREDICTED: inactive rhomboid protein 1 [Felis catus]
Length = 856
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q V +Q V + L+++ +
Sbjct: 773 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV------FQVVFLGLLAGLVVLFYFY 826
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC +L+C+P + C
Sbjct: 827 PV-----------RCEWCEFLTCIPFTDKFC 846
>gi|403280496|ref|XP_003931753.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 857
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 654 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 713
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ A G+LP +DN A
Sbjct: 714 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPWIDNIA 773
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L G
Sbjct: 774 HIFGFLSGLLLAFAFLPYITFGTSDK---------------YRKRALILVSLLAFAGLFA 818
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+ N W +L+C P + C
Sbjct: 819 GLVLWLYIYPFN--WPWIEHLTCFPFTSRFC 847
>gi|301769045|ref|XP_002919912.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid family member 2-like
[Ailuropoda melanoleuca]
Length = 823
Score = 65.5 bits (158), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 620 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFVLSGITGNLASAIFL 679
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 680 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 739
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L+ G
Sbjct: 740 HIFGFLSGLLLAFAFLPYITFGTSDK---------------YRKRALILVSLLVFAGLFA 784
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C+P + C
Sbjct: 785 SLVIWLYVYPIN--WPWVEYLTCLPFTSRFC 813
>gi|335297303|ref|XP_003131221.2| PREDICTED: inactive rhomboid protein 2-like [Sus scrofa]
Length = 827
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFVLSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L ++ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAVVLFLFVCGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ + L +V+L++ F
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDKYR--------------KRALILVSLLVFAGLFAS 789
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ L+ H W YL+C P + C
Sbjct: 790 LVIWLY---VYPIHWPWIEYLTCFPFTSRFC 817
>gi|350636534|gb|EHA24894.1| hypothetical protein ASPNIDRAFT_129525 [Aspergillus niger ATCC
1015]
Length = 891
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 74/147 (50%), Gaps = 25/147 (17%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I +++H G +H+ N++ + +G+ +E+ G+ R VY+ SG
Sbjct: 156 DDKPEPNQWFRFIIPMFIHTGFVHIGFNLIVQMTMGVDMERMIGWWRYFVVYVASGIWGF 215
Query: 164 -FGGAYY-----------LLFLFNAVSLLVLLAA---------ALLTLVVIIAINLAVGI 202
GG Y LF A+ +L LL ++ +++ IA++ +G+
Sbjct: 216 VLGGNYAGQGEASCGCSGALFGILALFILDLLYTWKDRPSPWVEMIIMILGIAVSFVLGL 275
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRP 229
LP +DNFAHIGGF+ G LG LL P
Sbjct: 276 LPGLDNFAHIGGFIMGLALGLCLLRSP 302
>gi|296203260|ref|XP_002748804.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Callithrix
jacchus]
Length = 828
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 625 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 684
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ A G+LP +DN A
Sbjct: 685 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPWIDNIA 744
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L G
Sbjct: 745 HIFGFLSGLLLAFAFLPYITFGTSDK---------------YRKRALILVSLLAFAGLFA 789
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+ N W +L+C P + C
Sbjct: 790 GLVLWLYIYPFN--WPWIEHLTCFPFTSRFC 818
>gi|227530504|ref|ZP_03960553.1| S54 family peptidase [Lactobacillus vaginalis ATCC 49540]
gi|227349609|gb|EEJ39900.1| S54 family peptidase [Lactobacillus vaginalis ATCC 49540]
Length = 220
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/162 (33%), Positives = 85/162 (52%), Gaps = 27/162 (16%)
Query: 90 PLFGPSS--STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
L G S+ S L + GA ++HE Q WRLIT ++LH G+ HL+ N ++L F+G+ +E
Sbjct: 27 TLLGGSTNFSVLIECGA-RVTSLIHEGQWWRLITPVFLHIGIAHLIINSITLYFLGMYIE 85
Query: 148 QQFGFVRVGFVYLLSGFGG----AYYLLFLFNA---VSLLVLLAAALL------------ 188
+ F R+ +YL+S F G AY+L +A +L L A L+
Sbjct: 86 ELFSHWRMLVIYLVSAFTGNLASAYFLPNTISAGASTALFGLFGAFLMLGESFHDNELIQ 145
Query: 189 ----TLVVIIAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVL 225
++++ IN+ + LP VD HIGG + GFL+ +V+
Sbjct: 146 DLSRQFLILVGINIVMDFFLPGVDLAGHIGGLLGGFLISYVV 187
>gi|410981852|ref|XP_003997280.1| PREDICTED: inactive rhomboid protein 2 [Felis catus]
Length = 824
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 94/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 621 QFYRLWLSLFLHAGVVHCFVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASALFL 680
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 681 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFVCGLLPWIDNIA 740
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ + L +V+L++ F
Sbjct: 741 HIFGFLSGLLLAFAFLPYITFGTSDKYR--------------KRALILVSLLVFAGLFAS 786
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ L+ H W YL+C P + C
Sbjct: 787 LVIWLYVYPV---HWPWIEYLTCFPFTSRFC 814
>gi|326202014|ref|ZP_08191884.1| Rhomboid family protein [Clostridium papyrosolvens DSM 2782]
gi|325987809|gb|EGD48635.1| Rhomboid family protein [Clostridium papyrosolvens DSM 2782]
Length = 519
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/147 (33%), Positives = 72/147 (48%), Gaps = 23/147 (15%)
Query: 96 SSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRV 155
L+ GA + + ++ E Q WR T ++LHA ++HL N S+ IG ++E+ FG R
Sbjct: 211 EQQLEPFGA-KVNNLIMEGQYWRFFTPMFLHADIVHLAVNCYSIYIIGAQVEKIFGRGRF 269
Query: 156 GFVYLLSGF-GGAYYLLFLFN--------------AVSLLVLLAAALLT------LVVII 194
+Y ++G G A F N A+ L ALL L+ +I
Sbjct: 270 LAIYFVAGLIGSAASFAFSLNSSVGASGAIFGLVGAMLYFSLRRPALLKSSYGVNLITMI 329
Query: 195 AINLAVGIL-PHVDNFAHIGGFMAGFL 220
INLA G++ +DN AHIGG + GFL
Sbjct: 330 VINLAYGVMNKRIDNHAHIGGLVGGFL 356
>gi|355709783|gb|EHH31247.1| p100hRho [Macaca mulatta]
Length = 855
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/211 (25%), Positives = 91/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H GF++G L F L FG + ++ Q + I +V L + +
Sbjct: 772 HTSGFISGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQVVFLGLLAGL 818
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 819 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 845
>gi|282851375|ref|ZP_06260740.1| peptidase, S54 (rhomboid) family protein [Lactobacillus gasseri
224-1]
gi|282557343|gb|EFB62940.1| peptidase, S54 (rhomboid) family protein [Lactobacillus gasseri
224-1]
Length = 241
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 83/174 (47%), Gaps = 31/174 (17%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+TL +LGA+ V EHQ WRL T +LH G +H+ +N + + ++G +E G R
Sbjct: 39 NTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYVGQFMEPLLGHWRFL 98
Query: 157 FVYLLSGFGG-----AY------------YLLFLFNAVSLLVLLAAALLTL-------VV 192
VYLLSG GG AY L LF V L L A+ + +
Sbjct: 99 SVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLGKQALA 158
Query: 193 IIAINLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+ INLA+ + H+D H+GG ++GFLLG + FG A Q + RV
Sbjct: 159 LAIINLALDLFASHIDILGHLGGLISGFLLGII------FGSAHLRQYHHKLRV 206
>gi|403331557|gb|EJY64731.1| Rhomboid family protein [Oxytricha trifallax]
Length = 278
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/263 (24%), Positives = 106/263 (40%), Gaps = 51/263 (19%)
Query: 19 RGSYSSGS--YYVEPGSDQQWTSW----LIPMFVVANVAVFIVAMYINNCPKNNWEGGRG 72
RGS S + ++ + D+++T + P V FI + I C
Sbjct: 8 RGSSSQAAVQFFQKSARDEKFTETIHNVMCPFLTVRQ---FIFVISIVQC---------- 54
Query: 73 CVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHL 132
++ ++++ + N L P S L G + +++Q WR I I+LHA +HL
Sbjct: 55 --GVYIASVAYKGISNNGLLAPQSEALFDFGQKYPYYMRYQYQVWRFIMPIFLHADFVHL 112
Query: 133 LANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVS------LLVLLAAA 186
+N+ S G LE GF +Y LSG GG + +A S + L+ +
Sbjct: 113 TSNIFSQFVFGSYLESTIGFFNFTILYFLSGIGGILFSSLASDATSVGASTAIFGLMGSF 172
Query: 187 LLTLVV-------------IIAINLAVGIL---------PHVDNFAHIGGFMAGFLLGFV 224
L+V IAI L +G+L +D+ H+GGF+ G +L
Sbjct: 173 AAYLIVNWKNLERQPQQKYTIAIFLIIGLLMNLTQAQSNSKIDSIGHLGGFLTGLILS-- 230
Query: 225 LLLRPQFGWAERHQLPAQARVKS 247
L L +R + Q +K+
Sbjct: 231 LFLGQTLPTTDRSIMKYQKAMKT 253
>gi|403280494|ref|XP_003931752.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 828
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 625 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 684
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ A G+LP +DN A
Sbjct: 685 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSGIVLFLFACGLLPWIDNIA 744
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L G
Sbjct: 745 HIFGFLSGLLLAFAFLPYITFGTSDK---------------YRKRALILVSLLAFAGLFA 789
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+ N W +L+C P + C
Sbjct: 790 GLVLWLYIYPFN--WPWIEHLTCFPFTSRFC 818
>gi|402572950|ref|YP_006622293.1| hypothetical protein Desmer_2505 [Desulfosporosinus meridiei DSM
13257]
gi|402254147|gb|AFQ44422.1| putative membrane protein [Desulfosporosinus meridiei DSM 13257]
Length = 314
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 78/153 (50%), Gaps = 23/153 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ S L GA + + ++ + WR +T +++H G +HLL N+ +L +G E+ FG R
Sbjct: 157 NQSVLIAFGA-KVNPLIQAGELWRFLTSVFIHIGFLHLLFNLYALWSLGPISERNFGHWR 215
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVS------LLVLLAAAL---------------LTLVVI 193
+Y++SG GG+ F A+S + LL A L + LV++
Sbjct: 216 FLVIYIMSGLGGSIASYFFSTALSAGASGAIFGLLGALLYYSLKRPSLWKSGLGMNLVIV 275
Query: 194 IAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVL 225
I IN G+ P +DN+AH+GG + GFL +L
Sbjct: 276 IIINFGFGLTQPGIDNYAHLGGLIIGFLTTMLL 308
>gi|326428155|gb|EGD73725.1| hypothetical protein PTSG_05431 [Salpingoeca sp. ATCC 50818]
Length = 745
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 95/205 (46%), Gaps = 39/205 (19%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
+Q +R T I++HAG+IH+ +E++ GF+R+ +Y ++ GG
Sbjct: 544 NQWYRFFTSIFVHAGIIHIFIVATFQWTAAAAVERKCGFLRMLLMYTIACVGGNLVSGIF 603
Query: 167 -----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNF 209
++ LF++ ++ + LL+L++ IA+ +G LP +DNF
Sbjct: 604 SPLYPQVGAAGGVFGVLGISIVDLFHSWPVIERPMSKLLSLLIEIAVLFFIGTLPWIDNF 663
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
AHIGGF+ G + V L FG + VK + VL V + LLI F
Sbjct: 664 AHIGGFVFGAVSAVVFLPYVTFGKFD--------AVK------KGVLLCVCIPLLIALFA 709
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCV 294
V L++ + ++ ++ C C + C+
Sbjct: 710 VALILFYEIQD-SEFCPGCDAIQCI 733
>gi|355716411|gb|AES05601.1| rhomboid 5-like protein 2 [Mustela putorius furo]
Length = 646
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G
Sbjct: 444 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 503
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + LF + LL A L L ++ G+LP +DN A
Sbjct: 504 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAVVLFLFICGLLPWIDNIA 563
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ + L +V+L++ F
Sbjct: 564 HIFGFLSGLLLAFAFLPYITFGTSDKYR--------------KRALILVSLLVFAGLFAS 609
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ L+ H W YL+C+P + C
Sbjct: 610 LVIWLYVYPI---HWPWIEYLTCLPFTSRFC 637
>gi|322703522|gb|EFY95130.1| DHHC zinc finger membrane protein [Metarhizium anisopliae ARSEF 23]
Length = 513
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 96/369 (26%), Positives = 139/369 (37%), Gaps = 122/369 (33%)
Query: 32 GSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPL----K 87
GSD++ W+ +F V V VFI + N G L+ P+ +
Sbjct: 155 GSDKKRIPWVCYVFTVVQVGVFIGEIIKN------------------GMLTGSPIMVKPQ 196
Query: 88 ENPLFGPSSSTLQKLGAL------------------------------------------ 105
NP+ GPS+ L +GA
Sbjct: 197 FNPMIGPSTQVLINMGARYVPCMHNVKEIQGSSIPVLFLCPNATRNDQFCPLSEVCGFGG 256
Query: 106 -------EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
++ +Q +R I I+LHAG+IH+ NML + + +E G VR V
Sbjct: 257 VPDPTFNNANQSPQPNQWFRFILPIFLHAGLIHIGFNMLLQMTLAKEMEMAIGSVRFFLV 316
Query: 159 YLLSG-FG---------------GAYYLLFLFNAVSLLVLLAA---------ALLTLVVI 193
YL +G FG GA LF A++LL L + L+ +++
Sbjct: 317 YLSAGIFGFVMGGNFAAPGVASTGASGSLFGVIALTLLDLFYSWTERRNPVKDLMFIILD 376
Query: 194 IAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP------------- 240
I I+ +G+LP +DNF+HIGGF+ G LG LL P A R ++
Sbjct: 377 IVISFVLGLLPGLDNFSHIGGFLMGLGLGICLLHSPN---ALRRRIDGSDNTSYSVVNSG 433
Query: 241 ----AQARVKSR------HNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHY 290
A +KS P + +V LI V +V+L G C WC Y
Sbjct: 434 SDDTAPGFLKSPIGFFKGRKPLWWAWWLVRAGFLIAVIIVFIVLLSNFYKGTHTCGWCKY 493
Query: 291 LSCVPTSKW 299
LSC+P S W
Sbjct: 494 LSCLPVSNW 502
>gi|167517132|ref|XP_001742907.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163779531|gb|EDQ93145.1| predicted protein [Monosiga brevicollis MX1]
Length = 323
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/216 (30%), Positives = 109/216 (50%), Gaps = 39/216 (18%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY-L 170
+ QGWR++T +++HAG IHLL + + +G+ LE++ G++R+ +YL+SG GG
Sbjct: 117 NPDQGWRILTALFMHAGAIHLLVMLYVQLSVGVPLERKAGWLRIALIYLISGCGGNLVSA 176
Query: 171 LFLFNAV------SLLVLLAAALL-----------------TLVVIIAINLAVGILPHVD 207
LF+ N+ ++ L+A AL+ T ++ A+ L +G P +D
Sbjct: 177 LFVPNSAQVGASGAVYGLVATALVDLMHCWRLLKSPWVQLGTYLIQTAVLLLLGTTPWLD 236
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
NFAH+GGF+ G L G V L FG ++ + + +L ++ L++
Sbjct: 237 NFAHVGGFLFGLLGGIVFLPYVTFGAWDKFR--------------KRLLLVICFPALVLA 282
Query: 268 FTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
F V LV+ +R +N N C C + CV K C N
Sbjct: 283 FLVVLVLFYRVQNTN-FCPGCERIQCVDWVKGLCDN 317
>gi|440302909|gb|ELP95215.1| hypothetical protein EIN_430110 [Entamoeba invadens IP1]
Length = 335
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/170 (27%), Positives = 80/170 (47%), Gaps = 26/170 (15%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
FE N + GP+S + LGA + ++ +++ WRLIT I+LHAG+IHL+ N+ + +
Sbjct: 123 FEKPSINWMLGPTSDAMDILGAKDAKKMKEQYELWRLITPIFLHAGIIHLVCNLSMQLRL 182
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAV-------SLLVLLAAALLT------ 189
G+ +E++ +R VY + G G + + +F +LL + L+
Sbjct: 183 GMIIERRMNTLRFLIVYFVGGIIGNCFSVMIFPTTQGVGASGALLAVFGGFLIDIILNKN 242
Query: 190 -------------LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLL 226
L++ I + +P +D AHI GF+ G + LL
Sbjct: 243 KFPSRQWISLIGQLLISTIIIFVLSFMPGIDYAAHIFGFIGGAVAALGLL 292
>gi|320162418|ref|YP_004175643.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
gi|319996272|dbj|BAJ65043.1| rhomboid family protein [Anaerolinea thermophila UNI-1]
Length = 258
Score = 65.1 bits (157), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 27/155 (17%)
Query: 88 ENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
PLFG L +GA + + ++ + + WRLIT ++LH + H+ NM +L G+ LE
Sbjct: 56 SRPLFG--YDLLLAMGA-KSNTLIQQGEFWRLITPMFLHVSLPHIAFNMYALYAFGVSLE 112
Query: 148 QQFGFVRVGFVYLLSGFGGAY--YLLFLFN----AVSLLVLLAA---------------- 185
+ +G R +Y + G GG YLL N + +L ++AA
Sbjct: 113 RHYGRRRFLLLYFIGGLGGVVLSYLLSPENSAGASTALFGVVAAEAVFLYYNRRWFGKEA 172
Query: 186 --ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAG 218
AL V II INL +G+ P +DN+ H+GG +AG
Sbjct: 173 VSALWNTVFIIGINLVLGLSPGIDNWGHLGGLIAG 207
>gi|226822866|gb|ACO83098.1| rhomboid family 1 (predicted) [Dasypus novemcinctus]
Length = 856
Score = 64.7 bits (156), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSICFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLLAVVLSLFTFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q V +Q V + L+++ +
Sbjct: 773 HISGFVSGLFLSFAFLPYISFGKFDLYRKRCQIIV------FQAVFLGLLAGLVVLFYVY 826
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+ C WC L+C+P + C
Sbjct: 827 PV-----------RCEWCELLTCIPFTDKFC 846
>gi|58337771|ref|YP_194356.1| hypothetical protein LBA1506 [Lactobacillus acidophilus NCFM]
gi|58255088|gb|AAV43325.1| putative membrane protein [Lactobacillus acidophilus NCFM]
Length = 226
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/154 (34%), Positives = 81/154 (52%), Gaps = 25/154 (16%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L K+GA+ VV HQ WRL T +LH GV+HL++N + + ++G +E G R
Sbjct: 37 NVLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYMEPIMGHTRFL 96
Query: 157 FVYLLSGFGG-----------------AYYLLFLFNAVSLLVL------LAAALLTLVVI 193
YLL+G GG + L LF A++ + L + + L ++
Sbjct: 97 VTYLLAGIGGNLMSLAFSADRGLSAGASTALFGLFGAMTAIGLRNFRNPMISYLGRQALV 156
Query: 194 IA-INLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
+A INLA+ I +P +D + HIGG +AGFLL +L
Sbjct: 157 LALINLALDIFVPGIDIWGHIGGLIAGFLLAIIL 190
>gi|311742190|ref|ZP_07716000.1| rhomboid family protein [Aeromicrobium marinum DSM 15272]
gi|311314683|gb|EFQ84590.1| rhomboid family protein [Aeromicrobium marinum DSM 15272]
Length = 283
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/142 (35%), Positives = 73/142 (51%), Gaps = 24/142 (16%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRV------------GFVYLLS-- 162
WRL+T +LHAGV+HLL NM +L G +E+ G R VYLL+
Sbjct: 123 WRLLTSAFLHAGVLHLLFNMYALYLFGPFVERALGSARYVAAYLTMAVFSGAVVYLLTDP 182
Query: 163 -----GFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMA 217
G GA + LF + A+ LLV + TL+V++A+N + + P++ H+GGF+A
Sbjct: 183 RTFTVGASGAVFGLFGY-ALVLLVRAKQDVRTLLVLLAVNGVISLAPNISWQGHLGGFIA 241
Query: 218 GFLLGFVLLLRPQFGWAERHQL 239
G LG + P+ ER L
Sbjct: 242 GLTLGAAVAYAPR----ERRTL 259
>gi|116829774|ref|NP_001070906.1| inactive rhomboid protein 2 [Canis lupus familiaris]
gi|122131675|sp|Q00M95.1|RHDF2_CANFA RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2; AltName: Full=Rhomboid
veinlet-like protein 6
gi|85717756|gb|ABC74872.1| rhomboid veinlet-like 6 isoform 1 [Canis lupus familiaris]
Length = 827
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L+ G
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDK---------------YRKRALILVSLLVFAGLFA 788
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 789 SLVIWLYVYPIN--WPWIEYLTCFPFTSRFC 817
>gi|149723286|ref|XP_001493344.1| PREDICTED: inactive rhomboid protein 2-like [Equus caballus]
Length = 827
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L+ G
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDK---------------YRKRALILVSLLVFAGLFA 788
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 789 SLVIWLYVYPIN--WPWIEYLTCFPFTSRFC 817
>gi|126335253|ref|XP_001364793.1| PREDICTED: rhomboid family member 1-like [Monodelphis domestica]
Length = 857
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + I LE+ G+ R+ +YLLSG G A +L
Sbjct: 654 QFYRLWLSLFLHAGILHCLVSVCFQMTILRDLEKLAGWHRISIIYLLSGITGNLASAIFL 713
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 714 PYRAEVGPAGSQFGILACLFVELFQSWQILAQPWRAFFKLLAVVLFLFTFGLLPWIDNFA 773
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
GF++ F L FG + + Y+ I+ ++ +G
Sbjct: 774 TSLGFISAFFSPCPFLPYISFG---------------KFDLYRKRCQIIVFQIIFLGLLS 818
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
GLV+LF C WC +L+C+P + C
Sbjct: 819 GLVILFYFYPIR--CEWCEFLTCIPFTDKFC 847
>gi|161507831|ref|YP_001577795.1| hypothetical protein lhv_1567 [Lactobacillus helveticus DPC 4571]
gi|160348820|gb|ABX27494.1| putative membrane protein [Lactobacillus helveticus DPC 4571]
Length = 226
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 87/195 (44%), Gaps = 41/195 (21%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L K+GA+ VV HQ WRL +LH GV+HL++N + + ++G +E G VR
Sbjct: 37 NVLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFL 96
Query: 157 FVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL------------------------VV 192
YLL+G GG + L + L + AL L +V
Sbjct: 97 VTYLLAGIGGNLFSLAFSSDRGLSAGASTALFGLFGAMVAIGLRNLHNPMISFLGRQALV 156
Query: 193 IIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNP 251
+ INLA+ I +P +D + HIGG + GFLL +L RV +NP
Sbjct: 157 LALINLALDIFVPGIDIWGHIGGLITGFLLAIIL----------------GDRVMRTYNP 200
Query: 252 YQYVLCIVALVLLIV 266
VL L++ IV
Sbjct: 201 KWRVLAGAVLIVYIV 215
>gi|441659440|ref|XP_004091347.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1
[Nomascus leucogenys]
Length = 855
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 92/213 (43%), Gaps = 41/213 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ G+LP +DNFA
Sbjct: 712 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G L F L FG + ++ Q V +Q V + L+++ +
Sbjct: 772 HISGFISGLFLSFAFLPYISFGKFDLYRKRCQIIV------FQVVFLGLLAGLVVLFYFY 825
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
+ C WC L+C+P + C
Sbjct: 826 PV-----------RCEWCEVLTCIPFTDKFCEK 847
>gi|417009713|ref|ZP_11945885.1| hypothetical protein AAULH_09078 [Lactobacillus helveticus MTCC
5463]
gi|328464817|gb|EGF36130.1| hypothetical protein AAULH_09078 [Lactobacillus helveticus MTCC
5463]
Length = 226
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 87/195 (44%), Gaps = 41/195 (21%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L K+GA+ VV HQ WRL +LH GV+HL++N + + ++G +E G VR
Sbjct: 37 NVLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFL 96
Query: 157 FVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL------------------------VV 192
YLL+G GG + L + L + AL L +V
Sbjct: 97 VTYLLAGIGGNLFSLAFSSDRGLSAGASTALFGLFGAMVAIGLRNLYNPMISFLGRQALV 156
Query: 193 IIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNP 251
+ INLA+ I +P +D + HIGG + GFLL +L RV +NP
Sbjct: 157 LALINLALDIFVPGIDIWGHIGGLITGFLLAIIL----------------GDRVMRTYNP 200
Query: 252 YQYVLCIVALVLLIV 266
VL L++ IV
Sbjct: 201 KWRVLAGAVLIVYIV 215
>gi|300361225|ref|ZP_07057402.1| S54 family peptidase [Lactobacillus gasseri JV-V03]
gi|300353844|gb|EFJ69715.1| S54 family peptidase [Lactobacillus gasseri JV-V03]
Length = 228
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 60/174 (34%), Positives = 83/174 (47%), Gaps = 31/174 (17%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+TL +LGA+ V EHQ WRL T +LH G +H+ +N + + +IG +E G R
Sbjct: 39 NTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYIGQFMEPLLGHWRFL 98
Query: 157 FVYLLSGFGG-----AY------------YLLFLFNAVSLLVLLAAALLTL-------VV 192
VYLLSG GG AY L LF V L L A+ + +
Sbjct: 99 SVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLGKQALA 158
Query: 193 IIAINLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+ INLA+ + H+D H+GG ++GFLLG + FG A Q + RV
Sbjct: 159 LAIINLALDLFASHIDILGHLGGLISGFLLGII------FGSAHLRQYHHKLRV 206
>gi|238854484|ref|ZP_04644823.1| rhomboid protease GluP [Lactobacillus jensenii 269-3]
gi|313471846|ref|ZP_07812338.1| rhomboid family protein [Lactobacillus jensenii 1153]
gi|238832911|gb|EEQ25209.1| rhomboid protease GluP [Lactobacillus jensenii 269-3]
gi|313449012|gb|EEQ68240.2| rhomboid family protein [Lactobacillus jensenii 1153]
Length = 229
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 78/156 (50%), Gaps = 25/156 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S+ L KLGA ++ Q WRL T +LH G++HL+ N ++L ++G LE G VR
Sbjct: 38 ESAVLFKLGAQFNPAIIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHVR 97
Query: 155 VGFVYLLSGFGGAYYLLFL--FNAVS-----LLVLLAAALLTL----------------- 190
+YLL+G GG L L NAVS L L A++ L
Sbjct: 98 FLIIYLLAGVGGNLMTLALGSDNAVSAGASTALFGLFGAMIALGIANRTHEGMAYLGRQS 157
Query: 191 VVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
V+ INL I +P +D + H+GG +AGFLL +L
Sbjct: 158 FVLAVINLLFDINIPQIDTWGHVGGLLAGFLLTVIL 193
>gi|431793836|ref|YP_007220741.1| hypothetical protein Desdi_1896 [Desulfitobacterium
dichloroeliminans LMG P-21439]
gi|430784062|gb|AGA69345.1| putative membrane protein [Desulfitobacterium dichloroeliminans LMG
P-21439]
Length = 321
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 108/230 (46%), Gaps = 32/230 (13%)
Query: 24 SGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSF 83
+GS + P ++++ I ++ +N +V P N+ F L++
Sbjct: 87 TGSIFAAPATEKRDRLNKILSYLESNPSVGTTQASSTGVPTNSGFSTASEAVTFRPYLTY 146
Query: 84 EPLKEN-------PLFGPSSST--LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLA 134
+ N L G S++T L GA + + ++ + + WRL T ++LH GVIHL
Sbjct: 147 SLIFINLFIFAMMTLAGGSTNTGVLIMFGA-KVNSLILQGEYWRLFTSMFLHIGVIHLAF 205
Query: 135 NMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVS------LLVLLAAALL 188
N+ +L +G LE+ FG +R +Y+ SG G+ +A+S + +L A ++
Sbjct: 206 NLYALWALGPILEELFGRIRYLLIYISSGVMGSAASFLFTDAISAGASGAIFGILGALVV 265
Query: 189 ---------------TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLG 222
LV+I+ INL++G P +D +AHIGG ++G LL
Sbjct: 266 YSRSKPFLWKSGFGKNLVIIVLINLSIGFFQPGIDVYAHIGGLLSGMLLA 315
>gi|94968908|ref|YP_590956.1| rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
gi|94550958|gb|ABF40882.1| Rhomboid-like protein [Candidatus Koribacter versatilis Ellin345]
Length = 365
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 73/136 (53%), Gaps = 27/136 (19%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-AYYLLFLFN 175
WR++T ++LH G++H+L NM +L +G E +G +Y+LSGFGG A LL+ +
Sbjct: 107 WRMLTSMFLHGGILHILVNMFALRNLGYTAELFYGRKNFLIIYMLSGFGGSAATLLWRPD 166
Query: 176 AVSL-----LVLLAAALLTLV--------------------VIIAINLAVG-ILPHVDNF 209
+VS+ + +A AL +V +I NL +G LP ++N
Sbjct: 167 SVSVGASGAIFGVAGALAAMVYFKKLPVDRALLKRDIGSIGAVIFYNLLIGAALPIINNA 226
Query: 210 AHIGGFMAGFLLGFVL 225
AH+GG +AG +LGF L
Sbjct: 227 AHVGGLVAGAILGFTL 242
>gi|443626016|ref|ZP_21110448.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
gi|443340440|gb|ELS54650.1| putative membrane protein [Streptomyces viridochromogenes Tue57]
Length = 313
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/179 (34%), Positives = 94/179 (52%), Gaps = 26/179 (14%)
Query: 73 CVARFLGRLSF-EPLKEN-PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVI 130
C+A FL +LS +P + L G + + +LG +E V E Q +RL+T ++LH I
Sbjct: 110 CLAVFLAQLSMGDPFTDRFDLMG--RAYVPELGDVEG---VAEGQWYRLLTSMFLHGSYI 164
Query: 131 HLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA--YYLLF---------------L 173
H+L NMLSL +IG LE G VR +YL+SG G+ YL+ L
Sbjct: 165 HILFNMLSLWWIGGPLEAALGRVRYIALYLVSGLAGSALTYLIAAANQPSLGASGAIFGL 224
Query: 174 FNAVSLLV-LLAAALLTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
F A ++L+ L + ++ ++ INL L + AHIGG +AG L+G+ ++ P+
Sbjct: 225 FGATAVLMRRLQYDMRPVIALLVINLIFTFGLAQIAWQAHIGGLVAGLLVGYAMVHAPR 283
>gi|301769557|ref|XP_002920196.1| PREDICTED: LOW QUALITY PROTEIN: rhomboid family member 1-like
[Ailuropoda melanoleuca]
Length = 855
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/208 (25%), Positives = 90/208 (43%), Gaps = 41/208 (19%)
Query: 118 RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYLLF- 172
RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L +
Sbjct: 655 RLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYR 714
Query: 173 -------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIG 213
LF + +L A L ++ G+LP +DNFAHI
Sbjct: 715 AEVGPAGSQFGILACLFVELFQSWQVLARPWRAFFKLSAVVLFLFTFGLLPWIDNFAHIS 774
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLV 273
GF++G L F L FG + ++ Q V +Q V + L+++ + +
Sbjct: 775 GFISGLFLSFAFLPYISFGKFDLYRKRCQILV------FQVVFLGLLAGLVVLFYVYPV- 827
Query: 274 MLFRGENGNDHCSWCHYLSCVPTSKWKC 301
C WC +L+C+P + C
Sbjct: 828 ----------RCEWCEFLTCIPFTDKFC 845
>gi|348551344|ref|XP_003461490.1| PREDICTED: inactive rhomboid protein 2-like [Cavia porcellus]
Length = 824
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 94/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 621 QFYRLWLSLFLHAGLVHCLVSVIFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 680
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L I+ G+LP +DN A
Sbjct: 681 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLFAIVLFLFICGLLPWIDNIA 740
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ + VL +V+L L+ G
Sbjct: 741 HIFGFLSGMLLAFAFLPYITFGTSDKYR--------------KRVLILVSL-LVFAGLFA 785
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 786 ALVLWLYIYPIN--LPWIEYLTCFPFTSHFC 814
>gi|345022094|ref|ZP_08785707.1| hypothetical protein OTW25_12319 [Ornithinibacillus scapharcae
TW25]
Length = 517
Score = 64.7 bits (156), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 52/220 (23%)
Query: 93 GPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 152
S+ TL + GA +++ ++ + + WR++T ++LH G+ H ++NML L + G E+ +G
Sbjct: 207 SESNETLIEYGA-KFNPLILDGEWWRVVTSMFLHIGLFHFISNMLFLYYFGSLAEKIYGS 265
Query: 153 VRVGFVYLLSGFG-----------------GAYYLLF-------LFNAVSLLVLLAAALL 188
+R F+Y+L+G GA Y LF LF+ + +L
Sbjct: 266 LRFFFIYMLAGIAGSVASFAFVTNLSAGASGALYGLFGAFIYFGLFHKKIFFRTIGKDIL 325
Query: 189 TLVVIIAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKS 247
L + IN+ +G +LP +D AH+GG +AGF+ ++
Sbjct: 326 ML---LGINIVLGFVLPQLDVTAHMGGLVAGFIAAGIV---------------------- 360
Query: 248 RHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSW 287
H P + L I AL +I + V++F N + ++
Sbjct: 361 -HFPKKRKLGIQALAFIIYAIAIYSVLMFGVTNNQTNPTY 399
>gi|431908742|gb|ELK12334.1| Rhomboid family member 2 [Pteropus alecto]
Length = 847
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H +++ + + LE+ G+ R+ +++LSG G A +L
Sbjct: 644 QFYRLWLSLFLHAGVVHCFVSIIFQMTVLRDLEKLAGWHRISIIFILSGITGNLASAIFL 703
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 704 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFLNLSAIVLFLFVCGLLPWIDNIA 763
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ + L +V+L++ F
Sbjct: 764 HIFGFLSGMLLAFAFLPYITFGTSDKYR--------------KRALILVSLLVFAGLFAS 809
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ L+ H W YL+C P + C
Sbjct: 810 LVIWLYVYPI---HWPWIEYLTCFPFTSRFC 837
>gi|116514421|ref|YP_813327.1| membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
gi|116093736|gb|ABJ58889.1| Membrane-associated serine protease [Lactobacillus delbrueckii
subsp. bulgaricus ATCC BAA-365]
Length = 223
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/173 (30%), Positives = 80/173 (46%), Gaps = 25/173 (14%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+S L K+GA+ VV E Q WRL T +LH G++H+ +N + + +IG E FG
Sbjct: 31 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 90
Query: 154 RVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL----------------------- 190
R +YLLSG GG+ L N ++ + AL L
Sbjct: 91 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGPMTCAGFKDKDNTLLSFLGRQ 150
Query: 191 -VVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA 241
+ + INL + + +P VD H+GG + G LL +L G+ + +L A
Sbjct: 151 ALALAVINLVLDVFMPDVDILGHLGGLITGALLAVILGDATYKGYGKGGRLLA 203
>gi|15613984|ref|NP_242287.1| hypothetical protein BH1421 [Bacillus halodurans C-125]
gi|10174038|dbj|BAB05140.1| BH1421 [Bacillus halodurans C-125]
Length = 514
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 81/159 (50%), Gaps = 26/159 (16%)
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
TL + GA +++ + + + WRL++ ++LH G++H + N L+L ++G +E+ +G R
Sbjct: 214 TLIEFGA-KYNPAIADGEWWRLLSSMFLHIGILHFMMNSLALFYLGGTVERIYGTSRFFI 272
Query: 158 VYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVIIAI 196
+Y ++G G+ + L F V + ++++I+
Sbjct: 273 IYFIAGLAGSIASFALNAHVSAGASGAIFGCFGALLYFGTVHKKLFFRTMGSSVLLILVF 332
Query: 197 NLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLL---RPQF 231
NLA G I+P +DN AHIGG + GFL V+ L RP+
Sbjct: 333 NLAFGFIIPMIDNGAHIGGLIGGFLASAVVHLPNHRPRL 371
>gi|256389276|ref|YP_003110840.1| rhomboid family protein [Catenulispora acidiphila DSM 44928]
gi|256355502|gb|ACU68999.1| Rhomboid family protein [Catenulispora acidiphila DSM 44928]
Length = 356
Score = 64.3 bits (155), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 22/152 (14%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNA 176
+RL+T ++LHA +IH+ +NM+SL FIG LE G +R VYL+ G GA +
Sbjct: 144 YRLVTSMFLHANLIHIASNMISLFFIGPMLEAMLGRLRFVLVYLIGGLAGAVTSYWFMTP 203
Query: 177 VSLLVLLAAALLT-----LVVI-----------IAINLAVGIL-----PHVDNFAHIGGF 215
+S L A+ ++ LVVI IA+ L + I+ ++D H+GG
Sbjct: 204 LSPASLGASGAISAVFGCLVVIGLRRKILDPGMIAVVLVINIVIPLQNTNIDWRDHVGGV 263
Query: 216 MAGFLLGFVLLLRPQF-GWAERHQLPAQARVK 246
+AG L+G V P+ G + + P + +V+
Sbjct: 264 VAGALIGAVYAFAPELIGALGKARAPREQQVR 295
>gi|149181994|ref|ZP_01860480.1| hypothetical protein BSG1_06322 [Bacillus sp. SG-1]
gi|148850259|gb|EDL64423.1| hypothetical protein BSG1_06322 [Bacillus sp. SG-1]
Length = 485
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 68/148 (45%), Gaps = 23/148 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ L + GA +++ ++ + + WR T I +H G +H+L N +L F+G +E+ FG R
Sbjct: 181 DTENLIRFGA-KYNPLIVDGEWWRFFTPIVIHIGFLHMLMNTFALYFLGPAVERIFGSAR 239
Query: 155 VGFVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVI 193
F+YL +GF G + L F + ++V+
Sbjct: 240 FLFIYLFAGFSGTLASFVFNDSLSAGASGAIFGCFGALLYFGTAHPKIFFRTMGTNILVV 299
Query: 194 IAINLAVG-ILPHVDNFAHIGGFMAGFL 220
I INLA G +P +DN HIGG G L
Sbjct: 300 IGINLAFGFTIPGIDNAGHIGGLAGGAL 327
>gi|345022776|ref|ZP_08786389.1| hypothetical protein OTW25_15910 [Ornithinibacillus scapharcae
TW25]
Length = 254
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 85/168 (50%), Gaps = 27/168 (16%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFG------------------ 151
++H+ + WR IT I+LH G++H+L N SLV G LE+ G
Sbjct: 54 MIHQGEYWRFITPIFLHGGLMHMLFNSFSLVLFGPALERMIGKSMFLIAYLGAGVLANIT 113
Query: 152 --FVRVGFVYLLSGFGGAYYLLF---LFNAV---SLLVLLAAALLTLVVIIAINLAVGIL 203
F+ F++ G GA + LF +F V SL+ A ++T++ +I + + I
Sbjct: 114 TFFINPSFMFPHVGASGAIFGLFGIYIFMVVFRKSLIDSQNAQIVTVIFLIGLIMTF-IR 172
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNP 251
P ++ +AHI GF AGFL+ ++L+R + +A +++ + R NP
Sbjct: 173 PGINQYAHILGFAAGFLIAPLVLVRAKPFYASQYRRTHHDDGEIRFNP 220
>gi|423719255|ref|ZP_17693437.1| rhomboid family protein [Geobacillus thermoglucosidans TNO-09.020]
gi|383368158|gb|EID45433.1| rhomboid family protein [Geobacillus thermoglucosidans TNO-09.020]
Length = 389
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ L K GA +++ ++ + WR T I+LH G +HLL N +L ++G+ +E+ +G R
Sbjct: 208 NPDVLIKYGA-KFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWR 266
Query: 155 VGFVYLLSGF-----------------GGAYYLLF----LFNAVSLLVLLAAALLTLVVI 193
F+Y +GF GA + LF F V + ++ +
Sbjct: 267 FFFIYFTAGFFGTLGSFLFTASLSAGASGAIFGLFGALLYFGTVYRHLFWQTIGTNIIGL 326
Query: 194 IAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
I INL G I+P +DN HIGG + G+L ++ L F W ++
Sbjct: 327 IVINLVFGMIVPGIDNAGHIGGLIGGYLAAGIVHLPNHFDWKKQ 370
>gi|333371980|ref|ZP_08463918.1| rhomboid protease GluP [Desmospora sp. 8437]
gi|332975161|gb|EGK12063.1| rhomboid protease GluP [Desmospora sp. 8437]
Length = 215
Score = 64.3 bits (155), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 60/168 (35%), Positives = 80/168 (47%), Gaps = 35/168 (20%)
Query: 87 KENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
NPL L + GALE ++ + + WRL+T ++LH G+ H L N SL +G +L
Sbjct: 55 STNPL------VLLRFGALENTALLIDGEWWRLVTPVFLHIGITHFLFNSFSLYLLGPQL 108
Query: 147 EQQFGFVRVGFVYLLSG-----------------------FG--GAYYLLFLFNAVSLLV 181
E FG R +YLL+G +G G Y LFLF S+
Sbjct: 109 EWLFGRWRFIALYLLTGIMGNLATVYLGEVGISAGASGAIYGLLGVYVYLFLFRRGSMDP 168
Query: 182 LLAAALLTLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLR 228
LL LV INL + IL P ++ AH+GG +AGFLL LL R
Sbjct: 169 DTGKGLLALV---GINLVISILTPTINLTAHLGGLVAGFLLAGPLLRR 213
>gi|138896022|ref|YP_001126475.1| hypothetical protein GTNG_2385 [Geobacillus thermodenitrificans
NG80-2]
gi|134267535|gb|ABO67730.1| Conserved hypothetical protein [Geobacillus thermodenitrificans
NG80-2]
Length = 386
Score = 63.9 bits (154), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/166 (28%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S L + GA +++ ++ + WR +T ++LH G +HLL N +L ++GI +E+ +G +R
Sbjct: 204 DPSVLIRYGA-KFNPLIEMGEWWRFLTPMFLHIGFLHLLTNTFALYYLGITVERLYGSLR 262
Query: 155 VGFVYLLSGF-----------------GGAYYLLF----LFNAVSLLVLLAAALLTLVVI 193
+Y +GF GA + LF F V + + +V +
Sbjct: 263 FLLIYTTAGFFGTLASFLFTPSISAGASGAIFGLFGALLYFGTVYRHLFFRTMGMNVVSL 322
Query: 194 IAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
I +NL G+L P +DN HIGG + GFL + L + W + +
Sbjct: 323 IVVNLLFGLLVPGIDNAGHIGGLVGGFLAAGAVHLPKRAAWGRQMK 368
>gi|452986411|gb|EME86167.1| rhomboids protein [Pseudocercospora fijiensis CIRAD86]
Length = 514
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 63/251 (25%), Positives = 97/251 (38%), Gaps = 75/251 (29%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
D Q WR I I+LHAG+IH+ N+L + +G +E G +R +Y +G G
Sbjct: 239 DDKPAPDQWWRFIVPIFLHAGIIHIGFNLLLQLTLGRDVELLIGSIRFAILYFAAGIFG- 297
Query: 168 YYLLFLFNAVSLLVLLAAALL--------------------------TLVVIIAINLAVG 201
+ L F A + + L +++ I I +G
Sbjct: 298 FILGGNFAATGIASTGCSGSLFGILAIILLDLLYNWRDRQSPIKDLLFIIIDILIAFVLG 357
Query: 202 ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVAL 261
+LP +DNF+HIGGF+ G +LG LL P + AR S+ +P+ Y +
Sbjct: 358 LLPGLDNFSHIGGFVMGLVLGICLLRSPS----------SVARRTSQLDPFSYQQVMTPA 407
Query: 262 -------------------------------VLLIVGFTVGLVMLFRG----ENGNDHCS 286
L +VG + ++L + G CS
Sbjct: 408 SRSEGLKSFVKNPQGFFKDRRGGWWAWWLVRALALVGVLIAFILLLKNFYVWRTG---CS 464
Query: 287 WCHYLSCVPTS 297
WC YLSC+P +
Sbjct: 465 WCKYLSCLPIT 475
>gi|357521427|ref|XP_003631002.1| hypothetical protein MTR_8g106030 [Medicago truncatula]
gi|355525024|gb|AET05478.1| hypothetical protein MTR_8g106030 [Medicago truncatula]
Length = 265
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/124 (38%), Positives = 64/124 (51%), Gaps = 18/124 (14%)
Query: 165 GGAYYLLFLFNAVSLLVLLAAALLTLVV--IIAINLAVGILPHVDNFAHIGGFMAGFLLG 222
G Y L+F LLV + + L + + NL +GI+P V+NF IGG + GFLLG
Sbjct: 158 GMIYELIF----AKLLVFTISIMFNLSIGMVPVFNLTIGIVPIVNNFGLIGGLIPGFLLG 213
Query: 223 FVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGN 282
FVLL + + LP Q ++ R P I+ +LL G GLV L +G N N
Sbjct: 214 FVLLCK-----KDPFVLPDQ-KLHKRCLP------IICFILLSTGLIGGLVSLLKGVNMN 261
Query: 283 DHCS 286
DHCS
Sbjct: 262 DHCS 265
>gi|116630012|ref|YP_815184.1| membrane-associated serine protease [Lactobacillus gasseri ATCC
33323]
gi|311110357|ref|ZP_07711754.1| putative small hydrophobic molecule transporter protein
[Lactobacillus gasseri MV-22]
gi|116095594|gb|ABJ60746.1| Membrane-associated serine protease [Lactobacillus gasseri ATCC
33323]
gi|311065511|gb|EFQ45851.1| putative small hydrophobic molecule transporter protein
[Lactobacillus gasseri MV-22]
Length = 228
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 83/174 (47%), Gaps = 31/174 (17%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+TL +LGA+ V EHQ WRL T +LH G +H+ +N + + ++G +E G R
Sbjct: 39 NTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYVGQFMEPLLGHWRFL 98
Query: 157 FVYLLSGFGG-----AY------------YLLFLFNAVSLLVLLAAALLTL-------VV 192
VYLLSG GG AY L LF V L L A+ + +
Sbjct: 99 SVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLGKQALA 158
Query: 193 IIAINLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+ INLA+ + H+D H+GG ++GFLLG + FG A Q + RV
Sbjct: 159 LAIINLALDLFASHIDILGHLGGLISGFLLGII------FGSAHLRQYHHKLRV 206
>gi|418035808|ref|ZP_12674250.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
gi|354689374|gb|EHE89372.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1519]
Length = 215
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 31/178 (17%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+S L ++GA+ VV E Q WRL T +LH G++H+ +N + + +IG E FG
Sbjct: 23 ESTSVLLEMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 82
Query: 154 RVGFVYLLSGFGGAYY-----------------LLFLFNAV----------SLLVLLAAA 186
R +YLLSG GG+ L LF A+ +LL L
Sbjct: 83 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGAMTCAGFKDKDNTLLSFLGRQ 142
Query: 187 LLTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
L L V INL + + +P VD H+GG + G LL +L G+ + +L A A
Sbjct: 143 ALALAV---INLVLDVFMPDVDILGHLGGLITGALLAVILGDATYKGYGKGGRLLAAA 197
>gi|336234689|ref|YP_004587305.1| rhomboid protease [Geobacillus thermoglucosidasius C56-YS93]
gi|335361544|gb|AEH47224.1| Rhomboid protease [Geobacillus thermoglucosidasius C56-YS93]
Length = 389
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 79/164 (48%), Gaps = 23/164 (14%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ L K GA +++ ++ + WR T I+LH G +HLL N +L ++G+ +E+ +G R
Sbjct: 208 NPDVLIKYGA-KFNPLIQAGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWR 266
Query: 155 VGFVYLLSGF-----------------GGAYYLLF----LFNAVSLLVLLAAALLTLVVI 193
F+Y +GF GA + LF F V + ++ +
Sbjct: 267 FFFIYFTAGFFGTLGSFLFTASLSAGASGAIFGLFGALLYFGTVYRHLFWQTIGTNIIGL 326
Query: 194 IAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
I INL G I+P +DN HIGG + G+L ++ L F W ++
Sbjct: 327 IVINLVFGMIVPGIDNAGHIGGLIGGYLAAGIVHLPNHFDWKKQ 370
>gi|116206648|ref|XP_001229133.1| hypothetical protein CHGG_02617 [Chaetomium globosum CBS 148.51]
gi|88183214|gb|EAQ90682.1| hypothetical protein CHGG_02617 [Chaetomium globosum CBS 148.51]
Length = 526
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/245 (30%), Positives = 108/245 (44%), Gaps = 60/245 (24%)
Query: 113 EHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------ 165
+Q +R I I++HAG+IH+ NML + +G +E+ G +R VY+ +G FG
Sbjct: 285 PNQWFRFIVPIFMHAGLIHIGFNMLLQLTLGRDMEKSIGSIRFFLVYMSAGIFGFVMGGN 344
Query: 166 ---------GAYYLLFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGILPHVD 207
GA LF A++LL LL LL +++ I I+ +G+LP +D
Sbjct: 345 YAGTAIASTGASGSLFGIIALTLLDLLYSWKDRVSPVKDLLFILLDIVISFVLGLLPGLD 404
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRH---------NPYQYVLCI 258
NF+HIGGF+ G LG LL P + R ++ S H P +V
Sbjct: 405 NFSHIGGFLMGLGLGVCLLHSPN---SLRRRIGDDVPYASSHVSGGSAALGTPPSFVRNP 461
Query: 259 V-------------------ALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKW 299
V ALVL+ V F + L + C WC YLSC+P W
Sbjct: 462 VGFFKGRRPLWWAWWLIRAGALVLVTVVFILLLKNFYVDRAT---CDWCRYLSCLPVRDW 518
Query: 300 -KCGN 303
+ GN
Sbjct: 519 CEVGN 523
>gi|42519493|ref|NP_965423.1| hypothetical protein LJ1618 [Lactobacillus johnsonii NCC 533]
gi|385826288|ref|YP_005862630.1| hypothetical protein [Lactobacillus johnsonii DPC 6026]
gi|417837977|ref|ZP_12484215.1| GlpG protein [Lactobacillus johnsonii pf01]
gi|41583781|gb|AAS09389.1| hypothetical protein LJ_1618 [Lactobacillus johnsonii NCC 533]
gi|329667732|gb|AEB93680.1| hypothetical protein LJP_1358c [Lactobacillus johnsonii DPC 6026]
gi|338761520|gb|EGP12789.1| GlpG protein [Lactobacillus johnsonii pf01]
Length = 228
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 59/174 (33%), Positives = 83/174 (47%), Gaps = 31/174 (17%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+TL +LGA+ V EHQ WRL T +LH G +H+ +N + + ++G +E G R
Sbjct: 39 NTLVRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYMGQFMEPLLGHWRFL 98
Query: 157 FVYLLSGFGG-----AY------------YLLFLFNAVSLLVLLAAALLTL-------VV 192
VYLLSG GG AY L LF V L L A+ + +
Sbjct: 99 TVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLGRQALA 158
Query: 193 IIAINLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+ INLA+ + H+D H+GG ++GFLLG + FG A Q + RV
Sbjct: 159 LAIINLALDLFASHIDILGHLGGLISGFLLGII------FGSAHLRQYHHKLRV 206
>gi|397612848|gb|EJK61912.1| hypothetical protein THAOC_17510, partial [Thalassiosira oceanica]
Length = 434
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 71/154 (46%), Gaps = 27/154 (17%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA D ++ Q RLIT ++LH G+ HL+AN SL +G +E FG R YL+S
Sbjct: 243 GAKRSDLLLEGRQLHRLITPVFLHGGIGHLVANSYSLKSMGNNVEGAFGPARTLATYLVS 302
Query: 163 G----------------------FG--GAYYLLFLFNAVSLLVLLAAALLTLVVIIAINL 198
G FG GAYY N+ A L+ I INL
Sbjct: 303 GVAGNIFSAVNSPNPAVGASGAIFGLVGAYYTFLARNSEIFGHSGRAQKGALLETIGINL 362
Query: 199 AVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+G+ P +DN+ HIGGF+ G +G L+ P+
Sbjct: 363 VLGMTNPVIDNWGHIGGFIGG--VGMSWLIGPKL 394
>gi|311112557|ref|YP_003983779.1| rhomboid family protein [Rothia dentocariosa ATCC 17931]
gi|310944051|gb|ADP40345.1| rhomboid family protein [Rothia dentocariosa ATCC 17931]
Length = 261
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 79/150 (52%), Gaps = 24/150 (16%)
Query: 104 ALEWDRVVHEHQGWRLITCIWLHA--GVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
AL+WD + +R++T +LH+ H++ NMLSL GI LEQ G+ R VYLL
Sbjct: 103 ALKWDYTEFTGEYYRVLTSGFLHSQNDYSHIVMNMLSLYIFGIALEQMMGWWRYLLVYLL 162
Query: 162 SGFGGAYYLLFLFNAVSLLV--------LLAAALLTLVVI------------IAINLAVG 201
S GG++ +L L + + +V L+ A L+ +VV+ IA+N+A G
Sbjct: 163 SIVGGSFGVLLLDDPTAEVVGASGGIFGLIGAYLVIMVVLRERDNIRALMIMIAVNVAFG 222
Query: 202 IL-PHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
L P + AH GGF+ G L +LL PQ
Sbjct: 223 FLVPGISWQAHAGGFVIG-ALATAVLLAPQ 251
>gi|325289903|ref|YP_004266084.1| rhomboid family protein [Syntrophobotulus glycolicus DSM 8271]
gi|324965304|gb|ADY56083.1| Rhomboid family protein [Syntrophobotulus glycolicus DSM 8271]
Length = 189
Score = 63.9 bits (154), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 72/139 (51%), Gaps = 22/139 (15%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
++++ Q WRL+T I++H G++HLL N +L+ +G E FG ++ +YLLSG GGA
Sbjct: 46 NQLIDLGQYWRLLTSIFIHIGIVHLLLNSYALIAVGQISEAVFGHLKFALLYLLSGIGGA 105
Query: 168 YYLLFLFNAVS------LLVLLAA---------------ALLTLVVIIAINLAVGILPH- 205
A+S + LL A + L+ +I N+ G++
Sbjct: 106 TASYLFSEAISAGASGAIFGLLGALVSYGWKNAGMWRSGLIANLLFVIGFNILFGLITTG 165
Query: 206 VDNFAHIGGFMAGFLLGFV 224
+DN+AHIGG + G ++G +
Sbjct: 166 IDNYAHIGGMLTGLIIGII 184
>gi|343428323|emb|CBQ71853.1| conserved hypothetical protein [Sporisorium reilianum SRZ2]
Length = 600
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/212 (27%), Positives = 83/212 (39%), Gaps = 41/212 (19%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS------- 162
H Q +R +T I++HAG +H+ N+L + + ++E+ G + G VY
Sbjct: 384 AAHPDQSYRFVTAIFVHAGFVHIFFNLLVQLTLCAQIERLIGTLAYGVVYFAGGIGGNLL 443
Query: 163 ------------GFGGAYYLLFLFNAVSLLV-----LLAAALLTLVVIIAINLAVGILPH 205
G GA Y V L A L + + A L
Sbjct: 444 GGNFGLIGQPALGASGAIYTCISIELVDLCYNWQYEYRARVRLAMSLGFATLGLALGLLP 503
Query: 206 V-DNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLL 264
DNFAHIGGF G L G V P +H++ +VL +VA+
Sbjct: 504 GLDNFAHIGGFCVGLLGGLVFA--PSIHPTTQHRI------------VTWVLRLVAMG-S 548
Query: 265 IVGFTVGLVM-LFRGENGNDHCSWCHYLSCVP 295
VGF GL + + C+WC YLSC+P
Sbjct: 549 AVGFFAGLASNFYTSPDPTKACTWCRYLSCLP 580
>gi|196248915|ref|ZP_03147615.1| Rhomboid family protein [Geobacillus sp. G11MC16]
gi|196211791|gb|EDY06550.1| Rhomboid family protein [Geobacillus sp. G11MC16]
Length = 390
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 80/166 (48%), Gaps = 23/166 (13%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S L + GA +++ ++ + WR +T ++LH G +HLL N +L ++GI +E+ +G +R
Sbjct: 208 DPSVLIRYGA-KFNPLIEMGEWWRFLTPMFLHIGFLHLLTNTFALYYLGITVERLYGSLR 266
Query: 155 VGFVYLLSGF-----------------GGAYYLLF----LFNAVSLLVLLAAALLTLVVI 193
+Y +GF GA + LF F V + + ++ +
Sbjct: 267 FLLIYATAGFFGTLASFLFTPSISAGASGAIFGLFGALLYFGTVYRHLFFRTMGMNVISL 326
Query: 194 IAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
I +NL G+L P +DN HIGG + GFL + L + W + +
Sbjct: 327 IVVNLLFGLLVPGIDNAGHIGGLVGGFLAAGAVHLPKRVAWGRQMK 372
>gi|395749487|ref|XP_003778952.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 2 [Pongo
abelii]
Length = 833
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 630 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 689
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 690 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 749
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 750 HIFGFLSGLLLAFAFLPYITFGTSDKYR 777
>gi|425778005|gb|EKV16152.1| Rhomboid family membrane protein [Penicillium digitatum Pd1]
gi|425780641|gb|EKV18647.1| Rhomboid family membrane protein [Penicillium digitatum PHI26]
Length = 507
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 62/264 (23%), Positives = 110/264 (41%), Gaps = 74/264 (28%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I I++H G IH+ N+ V +G +E+ G R Y SG
Sbjct: 239 DDQPSPNQWYRFIIPIFMHGGFIHIGFNLWVQVTMGADMERMVGMWRYTVTYFASGIFGF 298
Query: 164 -FGGAYYLLF---------LFNAVSLLVLLAA-----------ALLTLVVIIAINLAVGI 202
GG Y LF ++L +L L+ +++ + ++ +G+
Sbjct: 299 VLGGNYAAQLNPSDGCSGALFGILALFLLDLLYDWPQRESPWVELIIMLLGVGVSFVLGL 358
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLL-----LRPQFGWAERH---------QLPAQARVKSR 248
LP +DNF+HIGGF+ G +G ++ LR + G A + Q+ + + S
Sbjct: 359 LPGLDNFSHIGGFIMGLAIGLTIMRSPNALRERIGLARQPYVAMSGGAGQVGPEQKTTSV 418
Query: 249 HNPYQ---------------------------------YVLCIVALVLLIVGFTVGLVML 275
+ ++ +V+ ALV ++VGF + +V
Sbjct: 419 TDFFKGKRGLTSNSTETPGSTKGPLYFFKGRKPLWWLWWVVRAGALVAVLVGFIMLIVNF 478
Query: 276 FRGENGNDHCSWCHYLSCVPTSKW 299
++ + + CSWC+ LSC+P + W
Sbjct: 479 YKYPSSD--CSWCYRLSCMPVNGW 500
>gi|317128371|ref|YP_004094653.1| Rhomboid protease [Bacillus cellulosilyticus DSM 2522]
gi|315473319|gb|ADU29922.1| Rhomboid protease [Bacillus cellulosilyticus DSM 2522]
Length = 524
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 52/196 (26%), Positives = 91/196 (46%), Gaps = 44/196 (22%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S+ TL GA +++ ++ + + WR + ++LH G HL+ N L+L ++G +E+ +G R
Sbjct: 212 STETLISFGA-KFNPLILQGEWWRFFSAMFLHIGFFHLMMNSLALFYLGSAVERIYGTGR 270
Query: 155 VGFVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVI 193
+YL++G G+ + L F + + ++VI
Sbjct: 271 FLIIYLIAGLVGSIASFALNEQVSAGASGAIFGCFGALLYFGIKHKRLFFRTMGMNVIVI 330
Query: 194 IAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPY 252
++INLA G I+P +DN AHIGG + GF ++ LP VKS+
Sbjct: 331 LSINLAFGFIVPMIDNGAHIGGLIGGFAASAIV------------SLPRNKNVKSQ---- 374
Query: 253 QYVLCIVALVLLIVGF 268
I+A+ + I+ F
Sbjct: 375 -----IIAIFVTIIAF 385
>gi|288555804|ref|YP_003427739.1| rhomboid protein membrane-associated serine peptidase [Bacillus
pseudofirmus OF4]
gi|288546964|gb|ADC50847.1| rhomboid protein, putative membrane-associated serine peptidase
[Bacillus pseudofirmus OF4]
Length = 512
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 77/157 (49%), Gaps = 23/157 (14%)
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
TL + GA +++ + E + WR + ++LH G IHL N L+L ++G +E+ +G R
Sbjct: 211 TLIEFGA-KYNPAILEGEWWRFFSSMFLHIGFIHLFMNSLALFYLGGAVERMYGTSRFVL 269
Query: 158 VYLLSGF-----------------GGAYYLLF----LFNAVSLLVLLAAALLTLVVIIAI 196
+Y ++G GA + LF F + + ++VI+ I
Sbjct: 270 IYFIAGLIGSISSFAFNEQVAAGASGAIFGLFGALLYFGTAQPKLFFRTMGMNVLVILGI 329
Query: 197 NLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
NL G ++P +DN AHIGG + GFL ++ L + G
Sbjct: 330 NLVFGFVMPMIDNGAHIGGLVGGFLAAALVQLPKEKG 366
>gi|432843050|ref|XP_004065559.1| PREDICTED: inactive rhomboid protein 2-like [Oryzias latipes]
Length = 821
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 63/210 (30%), Positives = 97/210 (46%), Gaps = 42/210 (20%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AYYLLF 172
Q +RL ++LHAG++H + +++ + I LE+ G+ R+ +Y+LSG G A L
Sbjct: 614 QVYRLWLSLFLHAGLLHCVVSVVFQMTILRDLEKLAGWGRISVIYILSGITGNLASALFL 673
Query: 173 LFNAV-----SLLVLLA-----------------AALLTLVVIIAINLAVGILPHVDNFA 210
+ A S LLA A L L+ I+ G+LP +DN A
Sbjct: 674 PYRAEVGPAGSQFGLLACLFVELIQGWQILEKPWKAFLKLLGIVVFLFLCGLLPWIDNIA 733
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG ++ Y+ + IV +L+ VG
Sbjct: 734 HIFGFLSGLLLSFAFLPYIIFGTFDK---------------YRKRIMIVISMLVYVGLFA 778
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVP-TSKW 299
L++ F N +W YL+C+P TSK+
Sbjct: 779 SLIIWFYIYPIN--LNWLEYLTCLPLTSKF 806
>gi|93352558|ref|NP_001005498.2| inactive rhomboid protein 2 isoform 2 [Homo sapiens]
Length = 827
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDKYR 771
>gi|54311128|gb|AAH16034.2| Rhomboid 5 homolog 2 (Drosophila) [Homo sapiens]
gi|158257702|dbj|BAF84824.1| unnamed protein product [Homo sapiens]
Length = 856
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 773 HIFGFLSGLLLAFAFLPYITFGTSDKYR 800
>gi|45825436|gb|AAS77567.1| rhomboid veinlet-like 5 [Homo sapiens]
Length = 827
Score = 63.9 bits (154), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDKYR 771
>gi|397484236|ref|XP_003813283.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Pan paniscus]
Length = 856
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 773 HIFGFLSGLLLAFAFLPYITFGTSDKYR 800
>gi|426346562|ref|XP_004040945.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Gorilla gorilla
gorilla]
Length = 856
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 773 HIFGFLSGLLLAFAFLPYITFGTSDKYR 800
>gi|426346560|ref|XP_004040944.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Gorilla gorilla
gorilla]
Length = 827
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDKYR 771
>gi|397484234|ref|XP_003813282.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Pan paniscus]
Length = 827
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDKYR 771
>gi|402901170|ref|XP_003913529.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 2 [Papio
anubis]
Length = 828
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 625 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 684
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 685 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 744
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 745 HIFGFLSGLLLAFAFLPYITFGTSDKYR 772
>gi|301069362|ref|NP_078875.4| inactive rhomboid protein 2 isoform 1 [Homo sapiens]
gi|193806488|sp|Q6PJF5.2|RHDF2_HUMAN RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid 5 homolog 2; AltName: Full=Rhomboid family
member 2; AltName: Full=Rhomboid veinlet-like protein 5;
AltName: Full=Rhomboid veinlet-like protein 6
Length = 856
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 773 HIFGFLSGLLLAFAFLPYITFGTSDKYR 800
>gi|355568950|gb|EHH25231.1| hypothetical protein EGK_09013 [Macaca mulatta]
gi|355754404|gb|EHH58369.1| hypothetical protein EGM_08200 [Macaca fascicularis]
Length = 856
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 773 HIFGFLSGLLLAFAFLPYITFGTSDKYR 800
>gi|119609807|gb|EAW89401.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 851
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 648 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 707
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 708 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 767
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 768 HIFGFLSGLLLAFAFLPYITFGTSDKYR 795
>gi|109118386|ref|XP_001104742.1| PREDICTED: rhomboid family member 2-like isoform 1 [Macaca mulatta]
Length = 827
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDKYR 771
>gi|114670631|ref|XP_511699.2| PREDICTED: inactive rhomboid protein 2 isoform 6 [Pan troglodytes]
Length = 856
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 773 HIFGFLSGLLLAFAFLPYITFGTSDKYR 800
>gi|109118388|ref|XP_001104817.1| PREDICTED: rhomboid family member 2-like isoform 2 [Macaca mulatta]
Length = 856
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 713 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 773 HIFGFLSGLLLAFAFLPYITFGTSDKYR 800
>gi|330997596|ref|ZP_08321442.1| peptidase, S54 family [Paraprevotella xylaniphila YIT 11841]
gi|329570307|gb|EGG52042.1| peptidase, S54 family [Paraprevotella xylaniphila YIT 11841]
Length = 478
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/203 (31%), Positives = 92/203 (45%), Gaps = 52/203 (25%)
Query: 99 LQKLGALEWDRVVHEHQG------------WRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
L +G LE D + H G WR+ TC ++H+G+IHL+ N+ +L+F+G+ L
Sbjct: 77 LTGVGVLEPDNISLLHWGANFGPLTLTGDYWRVWTCNFVHSGLIHLIMNVYALLFVGLFL 136
Query: 147 EQQFGFVRVGFVYLLSGF------------------GGAYYLLFLFNAVSLLVLLAAALL 188
E G +RV VY L+G GA + L+ LL +
Sbjct: 137 EPMLGSLRVVMVYSLAGLYSSVAGLFCHADWISVGASGAIFGLYGALFARLLFYKGQSSW 196
Query: 189 TLVVIIAI------NLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPA 241
+++IAI NL GI +VDN AH GG +AGFLLG V +G A++ +
Sbjct: 197 RKILLIAIGGFILYNLLYGIGDNNVDNAAHTGGLVAGFLLGVV------YGVADKVREKG 250
Query: 242 QARVKSRHNPYQYVLCIVALVLL 264
+ V V C+ VLL
Sbjct: 251 KRMV---------VACLAEFVLL 264
>gi|119609810|gb|EAW89404.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_d [Homo sapiens]
Length = 827
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDKYR 771
>gi|114670635|ref|XP_001152047.1| PREDICTED: inactive rhomboid protein 2 isoform 3 [Pan troglodytes]
Length = 827
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDKYR 771
>gi|158257764|dbj|BAF84855.1| unnamed protein product [Homo sapiens]
Length = 827
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGDLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDKYR 771
>gi|297205734|ref|ZP_06923129.1| S54 family peptidase [Lactobacillus jensenii JV-V16]
gi|297148860|gb|EFH29158.1| S54 family peptidase [Lactobacillus jensenii JV-V16]
Length = 229
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 77/156 (49%), Gaps = 25/156 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S+ L KLGA V+ Q WRL T +LH G++HL+ N ++L ++G LE G VR
Sbjct: 38 DSAVLFKLGAQFNPAVIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHVR 97
Query: 155 VGFVYLLSGFGGAYYLLFL--FNAVS-----LLVLLAAALLTL----------------- 190
+YLL+G GG L NAVS L L A++ L
Sbjct: 98 FLIIYLLAGVGGNLMTLAFGSDNAVSAGASTALFGLFGAMIALGIANRTHEGMAYLGRQS 157
Query: 191 VVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
V+ INL I +P +D + H+GG +AGFLL +L
Sbjct: 158 FVLAVINLLFDINVPQIDTWGHVGGLIAGFLLTVIL 193
>gi|156041048|ref|XP_001587510.1| hypothetical protein SS1G_11502 [Sclerotinia sclerotiorum 1980]
gi|154695886|gb|EDN95624.1| hypothetical protein SS1G_11502 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 469
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/144 (34%), Positives = 71/144 (49%), Gaps = 33/144 (22%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG-------- 165
Q +R I ++LHAG+IH+ NML + +G +E G +R VY+ SG FG
Sbjct: 285 QWYRFILPMFLHAGIIHIGFNMLLQMTMGKEMEILIGPIRYFLVYISSGIFGFILGGNFA 344
Query: 166 -------GAYYLLFLF-------------NAVSLLVLLAAALLTLVVIIAINLAVGILPH 205
GA LF VS + LA LL ++ I+ +G+LP
Sbjct: 345 ATGISSTGASGALFGLIALTLLDLLYKWKERVSPMKELAFILLDVI----ISFVLGLLPG 400
Query: 206 VDNFAHIGGFMAGFLLGFVLLLRP 229
+DNF+HIGGF+ GF+LG +L P
Sbjct: 401 LDNFSHIGGFLMGFVLGLSILRSP 424
>gi|365157863|ref|ZP_09354108.1| hypothetical protein HMPREF1015_00268 [Bacillus smithii 7_3_47FAA]
gi|363622533|gb|EHL73692.1| hypothetical protein HMPREF1015_00268 [Bacillus smithii 7_3_47FAA]
Length = 397
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 83/162 (51%), Gaps = 23/162 (14%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
++ TL + GA +++ ++ + + WR T I+LH GV+HLL N ++L ++G +E+ FG R
Sbjct: 208 NTDTLIRFGA-KFNPLILDGEWWRFFTPIFLHIGVLHLLMNTMALYYLGTMVEKIFGRWR 266
Query: 155 VGFVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVI 193
++YL SGF G+ + L F V+ + + ++V+
Sbjct: 267 FLWIYLFSGFLGSVASFVFTPNLSAGASGAIFGCFGALLFFGFVNRSLFFRTIGMNVIVV 326
Query: 194 IAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWA 234
I INL G +P +DN HIGG + GFL V + Q W+
Sbjct: 327 IIINLIFGFTVPGIDNSGHIGGLIGGFLAAGVSYVPSQRNWS 368
>gi|187776993|ref|ZP_02993466.1| hypothetical protein CLOSPO_00538 [Clostridium sporogenes ATCC
15579]
gi|187773921|gb|EDU37723.1| peptidase, S54 family [Clostridium sporogenes ATCC 15579]
Length = 344
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 85/169 (50%), Gaps = 24/169 (14%)
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
+F L LGA + + ++ + +RLIT ++LH G+IHL NM +L IG +E
Sbjct: 177 SIFTSDIRVLIFLGA-KVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNSIGPLVEIY 235
Query: 150 FGFVRVGFVYLLSGFGGAYYLLFLFNAVS------LLVLLAAALL--------------- 188
FG V+ +Y +SG +Y+ ++VS + L A +
Sbjct: 236 FGKVKYLIIYFISGILSSYFSYLFSSSVSIGASGAIFGTLGATFIIAYKNRKRGGKEFLN 295
Query: 189 TLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
++ +I INL +G +P+VDNF HIGG + G ++ +L+ R Q G +R
Sbjct: 296 NIISVIVINLILGFSIPNVDNFGHIGGLIGGVIVTLLLMNRAQ-GREDR 343
>gi|441644013|ref|XP_003279183.2| PREDICTED: inactive rhomboid protein 2 [Nomascus leucogenys]
Length = 736
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G
Sbjct: 533 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASTIFL 592
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + LF + LL A L L I+ G+LP +DN A
Sbjct: 593 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 652
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 653 HIFGFLSGLLLAFAFLPYITFGTSDKYR 680
>gi|385813424|ref|YP_005849817.1| S54 family peptidase [Lactobacillus helveticus H10]
gi|323466143|gb|ADX69830.1| S54 family peptidase [Lactobacillus helveticus H10]
Length = 226
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 25/154 (16%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L K+GA+ VV HQ WRL +LH GV+HL++N + + ++G +E G VR
Sbjct: 37 NVLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFL 96
Query: 157 FVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL------------------------VV 192
YLL+G GG + L + L + AL L +V
Sbjct: 97 VTYLLAGIGGNLFSLAFSSDRGLSAGASTALFGLFGAMVAIGLRNLHNPMISFLGRQALV 156
Query: 193 IIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
+ INLA+ I +P +D + HIGG + GFLL +L
Sbjct: 157 LALINLALDIFVPGIDIWGHIGGLITGFLLAIIL 190
>gi|399220330|ref|NP_001100537.2| rhomboid family member 2 [Rattus norvegicus]
gi|399220332|ref|NP_001257763.1| rhomboid family member 2 [Rattus norvegicus]
Length = 825
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +R+ ++LHAG++H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 622 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 681
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L I+ G+LP +DN A
Sbjct: 682 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 741
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG ++R Y+ I+ +L+ G
Sbjct: 742 HIFGFLSGMLLAFAFLPYITFGTSDR---------------YRKQALILVSLLVFAGLFA 786
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 787 SLVLWLYIYPIN--WPWIEYLTCFPFTSRFC 815
>gi|255533925|ref|YP_003094297.1| rhomboid family protein [Pedobacter heparinus DSM 2366]
gi|255346909|gb|ACU06235.1| Rhomboid family protein [Pedobacter heparinus DSM 2366]
Length = 513
Score = 63.5 bits (153), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 71/137 (51%), Gaps = 27/137 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG--------FG- 165
Q WRL++ + H ++HL NM +L++IG+ E + G+ + VY+LSG +G
Sbjct: 218 QWWRLLSSQFYHFSLLHLFFNMYALIYIGLMTENKLGWAKTLIVYILSGTCGALLSVYGH 277
Query: 166 ----------------GAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHV-DN 208
GA+ L L NA A L++ V+++A L G+L DN
Sbjct: 278 KIGFMGGASGAIMGMFGAFLALLLSNAFEKTA-ARALLISTVIVVAYMLLNGLLSETADN 336
Query: 209 FAHIGGFMAGFLLGFVL 225
AH+GG ++GFL+G++L
Sbjct: 337 SAHLGGLVSGFLIGYLL 353
>gi|418029655|ref|ZP_12668189.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
gi|354689534|gb|EHE89520.1| Serine endopeptidase [Lactobacillus delbrueckii subsp. bulgaricus
CNCM I-1632]
Length = 209
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 76/160 (47%), Gaps = 31/160 (19%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+S L K+GA+ VV E Q WRL T +LH G++H+ +N + + +IG E FG
Sbjct: 17 ESTSVLLKMGAMFNPAVVMEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPVFGHW 76
Query: 154 RVGFVYLLSGFGGAYY-----------------LLFLFNAV----------SLLVLLAAA 186
R +YLLSG GG+ L LF A+ +LL L
Sbjct: 77 RFLLIYLLSGVGGSLLTLAFGNDQAISAGASTALFGLFGAMTCAGFKDKDNTLLSFLGRQ 136
Query: 187 LLTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
L L V INL + + +P VD H+GG + G LL +L
Sbjct: 137 ALALAV---INLVLDVFMPDVDILGHLGGLITGALLAVIL 173
>gi|260665468|ref|ZP_05866315.1| membrane-associated serine protease [Lactobacillus jensenii
SJ-7A-US]
gi|260560736|gb|EEX26713.1| membrane-associated serine protease [Lactobacillus jensenii
SJ-7A-US]
Length = 215
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/157 (35%), Positives = 78/157 (49%), Gaps = 25/157 (15%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+ L KLGA ++ Q WRL T +LH G++HL+ N ++L ++G LE G V
Sbjct: 23 DESAVLFKLGAQFNPAIIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHV 82
Query: 154 RVGFVYLLSGFGGAYYLLFL--FNAVS-----LLVLLAAALLTL---------------- 190
R +YLL+G GG L L NAVS L L A++ L
Sbjct: 83 RFLIIYLLAGVGGNLMTLALGSDNAVSAGASTALFGLFGAMIALGIANRTHEGMAYLGRQ 142
Query: 191 -VVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
V+ INL I +P +D + H+GG +AGFLL +L
Sbjct: 143 SFVLAVINLLFDINIPQIDTWGHVGGLLAGFLLTVIL 179
>gi|149054866|gb|EDM06683.1| rhomboid, veinlet-like 6 (Drosophila) (predicted), isoform CRA_a
[Rattus norvegicus]
Length = 595
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 91/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +R+ ++LHAG++H L +++ + I LE+ G+ R+ +++LSG G
Sbjct: 392 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 451
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + LF + LL A L I+ G+LP +DN A
Sbjct: 452 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 511
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG ++R++ A L +V+L L+ G
Sbjct: 512 HIFGFLSGMLLAFAFLPYITFGTSDRYRKQA--------------LILVSL-LVFAGLFA 556
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 557 SLVLWLYIYPIN--WPWIEYLTCFPFTSRFC 585
>gi|392426192|ref|YP_006467186.1| putative membrane protein [Desulfosporosinus acidiphilus SJ4]
gi|391356155|gb|AFM41854.1| putative membrane protein [Desulfosporosinus acidiphilus SJ4]
Length = 322
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 24/141 (17%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
+ ++ Q WRL+T +++H G HL N+ +L +G E +G + +Y+LSG GGA
Sbjct: 169 NSLIQAGQVWRLLTSMFIHIGYFHLAFNLYALWALGPLTELSYGHGKYFAIYMLSGLGGA 228
Query: 168 YYLLFLFNAV-------SLLVLLAAAL---------------LTLVVIIAINLAVGI-LP 204
FLF+ +++ LL A L + LV++I +NL G P
Sbjct: 229 -MASFLFSPFLSAGASGAIMGLLGAQLFFIYKRPYLWKSGLGMNLVIVILVNLGFGFWQP 287
Query: 205 HVDNFAHIGGFMAGFLLGFVL 225
+DNFAH+GG G +G +L
Sbjct: 288 GIDNFAHLGGLFTGMFMGALL 308
>gi|348521001|ref|XP_003448015.1| PREDICTED: inactive rhomboid protein 2-like [Oreochromis niloticus]
Length = 830
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/205 (27%), Positives = 90/205 (43%), Gaps = 41/205 (20%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H + +++ + I LE+ G++R+ +Y+LSG G A +L
Sbjct: 623 QVYRLWLSLFLHAGLLHCVVSVVFQMTILRDLEKLAGWLRISIIYMLSGITGNLASALFL 682
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF +L A L I+ G+LP +DN A
Sbjct: 683 PYRAEVGPAGSQFGLLACLFVELFQGWQMLEKPWNAFSKLSCIVLFLFLCGLLPWIDNIA 742
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG ++ Y+ + I +L VG
Sbjct: 743 HIFGFLSGLLLSFAFLPYVTFGTFDK---------------YRKRILIAVSLLAYVGLFA 787
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVP 295
L++ F N H W +L+C+P
Sbjct: 788 SLIVWFYIYPINFH--WLEHLTCLP 810
>gi|260103121|ref|ZP_05753358.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
gi|260083068|gb|EEW67188.1| conserved hypothetical protein [Lactobacillus helveticus DSM 20075]
Length = 227
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/195 (30%), Positives = 86/195 (44%), Gaps = 41/195 (21%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L K+GA+ VV HQ WRL +LH GV+HL++N + + ++G +E G R
Sbjct: 37 NVLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHFRFL 96
Query: 157 FVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL------------------------VV 192
YLL+G GG + L + L + AL L +V
Sbjct: 97 VTYLLAGIGGNLFSLAFSSDRGLSAGASTALFGLFGAMVAIGLRNLHNPMISFLGRQALV 156
Query: 193 IIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNP 251
+ INLA+ I +P +D + HIGG + GFLL +L RV +NP
Sbjct: 157 LALINLALDIFVPGIDIWGHIGGLITGFLLAIIL----------------GDRVMRTYNP 200
Query: 252 YQYVLCIVALVLLIV 266
VL L++ IV
Sbjct: 201 KWLVLAGAVLIVYIV 215
>gi|148234897|ref|NP_001090673.1| inactive rhomboid protein 2 [Xenopus (Silurana) tropicalis]
gi|193806414|sp|A0JPA1.1|RHDF2_XENTR RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2
gi|117558553|gb|AAI27322.1| rhbdf2 protein [Xenopus (Silurana) tropicalis]
Length = 826
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGVIH +++ + + LE+ G++R+ +Y+LSG G A +L
Sbjct: 623 QFYRLWLSLFLHAGVIHCCVSVVFQMTVLRDLEKLAGWLRISIIYILSGITGNLASALFL 682
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L L+ I+ G+LP +DN A
Sbjct: 683 PYRAEVGPAGSQFGLLACLFVELFQSWQILAKPWKAFLKLLGIVLFLFLFGLLPWIDNIA 742
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG A++ ++ I+ +L+ VG
Sbjct: 743 HIFGFLSGLLLSFSFLPYITFGTADK---------------FRKRAMIIISLLVFVGLFA 787
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N +W YL+C+P + C
Sbjct: 788 SLVIWLYVYPIN--WAWIEYLTCLPFTNKFC 816
>gi|403514649|ref|YP_006655469.1| S54 family peptidase [Lactobacillus helveticus R0052]
gi|403080087|gb|AFR21665.1| S54 family peptidase [Lactobacillus helveticus R0052]
Length = 226
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/154 (33%), Positives = 75/154 (48%), Gaps = 25/154 (16%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L K+GA+ VV HQ WRL +LH GV+HL++N + + ++G +E G VR
Sbjct: 37 NVLMKMGAMNNYAVVAGHQWWRLFAAQFLHIGVMHLVSNAIIIYYMGQYMEPIMGHVRFL 96
Query: 157 FVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL------------------------VV 192
YLL+G GG + L + L + AL L +V
Sbjct: 97 VTYLLAGIGGNLFSLAFSSDRGLSAGASTALFGLFGAMVAIGLRNLHNPMISFLGRQALV 156
Query: 193 IIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
+ INLA+ I +P +D + HIGG + GFLL +L
Sbjct: 157 LALINLALDIFVPGIDIWGHIGGLITGFLLAIIL 190
>gi|10438686|dbj|BAB15310.1| unnamed protein product [Homo sapiens]
Length = 619
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G
Sbjct: 416 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 475
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + LF + LL A L L I+ G+LP +DN A
Sbjct: 476 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 535
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 536 HIFGFLSGLLLAFAFLPYITFGTSDKYR 563
>gi|313884239|ref|ZP_07818005.1| peptidase, S54 family [Eremococcus coleocola ACS-139-V-Col8]
gi|312620686|gb|EFR32109.1| peptidase, S54 family [Eremococcus coleocola ACS-139-V-Col8]
Length = 229
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 76/155 (49%), Gaps = 23/155 (14%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S L GA V H+ WR+++ ++H G+ HLL NM++L F+G LE+ G +
Sbjct: 34 TDSRVLLDTGANFMPYVFQNHEYWRILSATFVHIGMSHLLFNMMTLYFMGPELEEILGHI 93
Query: 154 RVGFVYLLSGFGGAYYLLFLFNAVS------LLVLLAAALL----------------TLV 191
+ +YL++G GG L VS L + AA ++ + +
Sbjct: 94 KFLLIYLIAGIGGNLTSLAFNTGVSAGASTALFGMFAAFIVLAIIHPDSHYLWQRSRSFI 153
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVL 225
+++ +NL G L P +DN+ H+GG + G L +V+
Sbjct: 154 ILVGLNLVNGFLSPGIDNWGHLGGLLFGALATYVI 188
>gi|366053016|ref|ZP_09450738.1| membrane-associated serine protease [Lactobacillus suebicus KCTC
3549]
Length = 223
Score = 63.2 bits (152), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 87/169 (51%), Gaps = 34/169 (20%)
Query: 93 GPSSST--LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
G S++T L + GA + ++ E Q WRLIT ++LH G++HL+ N +++ +IG ++E F
Sbjct: 31 GGSTNTQILIEFGA-KVGTLIQEGQWWRLITPVFLHIGLMHLVVNSVTVYYIGTQIENMF 89
Query: 151 GFVRVGFVYLLSGF-GGAYYLLFLFNAVS-------------------------LLVLLA 184
G R +Y +S G +FL N++S + LL+
Sbjct: 90 GHARFLSIYFVSALTGNLASFVFLPNSLSAGASTAIFGLFGAFLMLGESFHHNPYIRLLS 149
Query: 185 AALLTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
LT V AINL + +P +D + H+GG + GFL+G+V + PQ G
Sbjct: 150 RQFLTFV---AINLVFDLFMPGIDIYGHLGGLVGGFLMGYV-VGTPQIG 194
>gi|255952919|ref|XP_002567212.1| Pc21g01420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211588923|emb|CAP95039.1| Pc21g01420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 507
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 103/264 (39%), Gaps = 75/264 (28%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
D +Q +R I I++H G IH+ N+L + +G +E+ G R Y SG
Sbjct: 239 DDQPAPNQWYRFIIPIFMHGGFIHIGFNLLVQMTMGADMERLIGMWRYTLTYFASGIFGF 298
Query: 164 -FGGAYYLLF---------LFNAVSLLVLLAA-----------ALLTLVVIIAINLAVGI 202
GG Y LF ++L +L L+ +++ + ++ +G+
Sbjct: 299 VLGGNYAAQLDPSDGCSGALFGILALYLLDLLYEWPQRESPWVELIIMILGVGVSFVLGL 358
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV----KSRHNPYQYVLCI 258
LP +DNF+HIGGF+ G +G ++ P ER L Q V + P Q
Sbjct: 359 LPGLDNFSHIGGFIMGLAIGMTIMRSPN-ALRERIGLARQPYVAMSGAGQAGPEQKTTSF 417
Query: 259 V-------------------------------------------ALVLLIVGFTVGLVML 275
+ ALV ++VGF + +V
Sbjct: 418 MDFFKGKRGLTSSSAETPGSTSGPLNFFKGRKPLWWLWWLVRAGALVAVLVGFIMLIVNF 477
Query: 276 FRGENGNDHCSWCHYLSCVPTSKW 299
++ + N CSWC+ LSC+ + W
Sbjct: 478 YKYPSSN--CSWCYRLSCMDVNGW 499
>gi|54311162|gb|AAH35829.1| RHBDF2 protein [Homo sapiens]
Length = 649
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 73/148 (49%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 446 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRIAIIFILSGITGNLASAIFL 505
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L L I+ G+LP +DN A
Sbjct: 506 PYRAEVGPAGSQFGLLACLFVELFQSWPLLERPWKAFLNLSAIVLFLFICGLLPWIDNIA 565
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
HI GF++G LL F L FG +++++
Sbjct: 566 HIFGFLSGLLLAFAFLPYITFGTSDKYR 593
>gi|424826465|ref|ZP_18251350.1| S54 family peptidase [Clostridium sporogenes PA 3679]
gi|365980910|gb|EHN16927.1| S54 family peptidase [Clostridium sporogenes PA 3679]
Length = 343
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 84/168 (50%), Gaps = 23/168 (13%)
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
+F L LGA + + ++ + +RLIT ++LH G+IHL NM +L IG +E
Sbjct: 177 SIFTSDIRVLIFLGA-KVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNSIGPLVEIY 235
Query: 150 FGFVRVGFVYLLSGFGGAYYLLFLFNAVS------LLVLLAAALL--------------- 188
FG V+ +Y +SG +Y+ ++VS + L A L+
Sbjct: 236 FGKVKYLIIYFISGILSSYFSYLFSSSVSIGASGAIFGTLGATLIIAYKNRKKGGKEFLN 295
Query: 189 TLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE 235
++ +I INL +G +P+VDNF HIGG + G ++ +L+ R + E
Sbjct: 296 NIISVIVINLILGFSIPNVDNFGHIGGLIGGVIVTLLLMNRTKAKSTE 343
>gi|339448421|ref|ZP_08651977.1| peptidase S54, rhomboid domain-containing protein [Lactobacillus
fructivorans KCTC 3543]
Length = 224
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 24/155 (15%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L K GA + +++V + Q WRLIT I++H G H+L N ++L ++G +E G +R +
Sbjct: 42 LLKFGA-QSNQLVRDGQWWRLITPIFVHIGFQHILINGITLYYLGKLIEPIVGHLRYFII 100
Query: 159 YLLSGFGGAYYLLFLFNAVS------LLVLLAAALL----------------TLVVIIAI 196
+++SG G L N +S + L A L+ T V+ + I
Sbjct: 101 FMVSGICGNLMSFALGNGISAGSSTAIFGLFGAFLMIAFQYRGNDFVRSTAKTFVLFVVI 160
Query: 197 NLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
NL I P +D + HIGGF+ G+L+ FV+ LR
Sbjct: 161 NLVFDIFTPGIDIYGHIGGFIGGYLVSFVVGLRQN 195
>gi|419760008|ref|ZP_14286293.1| integral membrane protein, Rhomboid family [Thermosipho africanus
H17ap60334]
gi|407515047|gb|EKF49833.1| integral membrane protein, Rhomboid family [Thermosipho africanus
H17ap60334]
Length = 223
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 27/172 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
F P+ + L + ++ +V Q +R++T +++H G IHL+ NM +L F+G +E +
Sbjct: 25 FFIPNEAVLYLMFGAQYGPLVSHGQWFRIVTSMFVHGGFIHLIFNMYALFFLGRIVENVY 84
Query: 151 GFVRVGFVYLLSGF-GGAYYLLFLFNAVS----------LLVLLAAALL----------- 188
G + Y LSG G +F +N+ S + VL AA
Sbjct: 85 GTEKFLTFYFLSGIVGNLATQIFYYNSFSVGASGAIFGLIGVLFAAGFRKDTPYSLKPIT 144
Query: 189 --TLVVIIAINLAVGILP--HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
L+ +I IN+ GI+P +++N AHIGGF+ G LLG+++ L + W R
Sbjct: 145 GSALLPMIVINIIFGIMPGTNINNAAHIGGFLTGMLLGYMIPLY-DYSWKVR 195
>gi|217077443|ref|YP_002335161.1| integral membrane protein, Rhomboid family [Thermosipho africanus
TCF52B]
gi|217037298|gb|ACJ75820.1| integral membrane protein, Rhomboid family [Thermosipho africanus
TCF52B]
Length = 223
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 27/172 (15%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
F P+ + L + ++ +V Q +R++T +++H G IHL+ NM +L F+G +E +
Sbjct: 25 FFIPNEAVLYLMFGAQYGPLVSHGQWFRIVTSMFVHGGFIHLIFNMYALFFLGRIVENVY 84
Query: 151 GFVRVGFVYLLSGF-GGAYYLLFLFNAVS----------LLVLLAAALL----------- 188
G + Y LSG G +F +N+ S + VL AA
Sbjct: 85 GTEKFLTFYFLSGIVGNLATQIFYYNSFSVGASGAIFGLIGVLFAAGFRKDTPYSLKPIT 144
Query: 189 --TLVVIIAINLAVGILP--HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
L+ +I IN+ GI+P +++N AHIGGF+ G LLG+++ L + W R
Sbjct: 145 GSALLPMIVINIIFGIMPGTNINNAAHIGGFLTGMLLGYMIPLY-DYSWKVR 195
>gi|26324818|dbj|BAC26163.1| unnamed protein product [Mus musculus]
Length = 827
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +R+ ++LHAG++H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVPFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L+ G
Sbjct: 744 HIFGFLSGMLLAFAFLPYITFGTSDK---------------YRKRALILVSLLVFAGLFA 788
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 789 SLVLWLYIYPIN--WPWIEYLTCFPFTSRFC 817
>gi|328776234|ref|XP_395087.4| PREDICTED: rhomboid family member 1 [Apis mellifera]
Length = 894
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 97/213 (45%), Gaps = 40/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS------------ 162
Q +RL T ++LHAG++HL +L F+ LE+ G +R+ +Y +
Sbjct: 687 QFYRLFTTMFLHAGILHLSITLLVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 746
Query: 163 ------GFGGAYYLLF------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
G GA++ L + + +L AL L+ ++ L +GILP VDN+A
Sbjct: 747 PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRALSKLIFVLIGLLILGILPWVDNYA 806
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ GF+ GFL + LL FG +R + + L + ++L++V FT+
Sbjct: 807 HLFGFIFGFLAAYALLPFISFGQYDRRR--------------KIWLIWICMILIVVLFTL 852
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L + + C C +C+P ++ C +
Sbjct: 853 LLALFYNVPVY--ECEVCKLFNCIPFTRDFCAS 883
>gi|340372015|ref|XP_003384540.1| PREDICTED: inactive rhomboid protein 1-like [Amphimedon
queenslandica]
Length = 876
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/217 (24%), Positives = 103/217 (47%), Gaps = 30/217 (13%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL+T ++LHAG+IHL+ + F+ +E+ G++R +YL SG GG
Sbjct: 650 QFYRLLTSLFLHAGIIHLVFTLTFHFFVLRHVEKYLGWLRTSLIYLGSGLGGNIVSAVFV 709
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+++L+++ L L L++II I L G+ P +DNFA
Sbjct: 710 PYNPEVGPAGGIFGIISFFLIYIMYQAHRLTKPWKEALKLLIIIIILLCCGLFPFIDNFA 769
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H GGF+ G L +L+ P + + + + K +NP++ + + ++ + +G V
Sbjct: 770 HFGGFLFGTLWSGILV--PYYQPLDAELAYYRDKHKREYNPWKDWIQVSKILFIFIGTPV 827
Query: 271 GLVMLFRGENGN--DHCSWC--HYLSCVPTSKWKCGN 303
+++ + +W +L+C+P ++ C N
Sbjct: 828 LILLYLLFFLIFYVEQDTWDGFRFLNCIPFTRTFCLN 864
>gi|227890613|ref|ZP_04008418.1| S54 family peptidase [Lactobacillus salivarius ATCC 11741]
gi|417788071|ref|ZP_12435754.1| GlpG protein (membrane protein of glp regulon) [Lactobacillus
salivarius NIAS840]
gi|417810486|ref|ZP_12457165.1| S54 family peptidase [Lactobacillus salivarius GJ-24]
gi|418961160|ref|ZP_13513047.1| rhomboid family integral membrane protein [Lactobacillus salivarius
SMXD51]
gi|227867551|gb|EEJ74972.1| S54 family peptidase [Lactobacillus salivarius ATCC 11741]
gi|334308248|gb|EGL99234.1| GlpG protein (membrane protein of glp regulon) [Lactobacillus
salivarius NIAS840]
gi|335349282|gb|EGM50782.1| S54 family peptidase [Lactobacillus salivarius GJ-24]
gi|380344827|gb|EIA33173.1| rhomboid family integral membrane protein [Lactobacillus salivarius
SMXD51]
Length = 220
Score = 62.8 bits (151), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 32/182 (17%)
Query: 91 LFGPSS--STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
LFG + + L + GA ++ + Q WRLIT +++H G+ HLL NM++L F+G LE
Sbjct: 28 LFGGTENIANLVRFGA-KYSPYIINGQYWRLITPMFIHIGLQHLLINMITLYFLGTLLEN 86
Query: 149 QFGFVRVGFVYLLSGF-GGAYYLLFLFNAVS------LLVLLAAALL------------- 188
FG R +YL+SG G F F+++S L + + L+
Sbjct: 87 IFGKTRFLIIYLVSGICGNIASFAFNFSSISAGASTALFGMFGSFLMLGESFRRNPYLQT 146
Query: 189 ---TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+++ +N+ G+ + D H+GG ++GFLLG+V+ G ++P R+
Sbjct: 147 MSRQFFLLVILNIFFGMFGNSDLTGHLGGLVSGFLLGYVV------GVPNLGRVPKVKRI 200
Query: 246 KS 247
S
Sbjct: 201 VS 202
>gi|123461226|ref|XP_001316801.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121899518|gb|EAY04578.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 488
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/239 (23%), Positives = 109/239 (45%), Gaps = 39/239 (16%)
Query: 78 LGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANML 137
+ + F+ ++NP G + L K GA + + + WRL T I L G++H A M+
Sbjct: 242 VAKFKFKTGQQNPYVGVTLPFLLKGGA-AYSQWIKSGDWWRLFTSISLQPGIVHY-AVMI 299
Query: 138 SLVFIGIRLEQQFGFVRVGFVYLLSG-FGGAYYLLFLFNAV--------------SLLVL 182
+ + +E+ GF ++LLSG +G + LL + + + SL+ L
Sbjct: 300 ICMGLLYEVERFNGFWVAMLLFLLSGLYGNVFSLLMVPDTIICGASGCVSGWLGFSLVRL 359
Query: 183 LAA--------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWA 234
A L+T ++++ + + G+LP ++NF ++ G + G L+ F L
Sbjct: 360 CAKFSQKRRICYLITEILMLVVLVFEGLLPFINNFQNVAGLILGILISFSL--------- 410
Query: 235 ERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSC 293
LP +R K R + ++ ++ ++I+ F+V +V + N + C C + C
Sbjct: 411 ----LPNNSRTKCR-TIARGIIAFLSFPIMIIIFSVVVVFYIKDSNISTKCKICSQIDC 464
>gi|188589117|ref|YP_001920138.1| rhomboid family protein [Clostridium botulinum E3 str. Alaska E43]
gi|188499398|gb|ACD52534.1| rhomboid family protein [Clostridium botulinum E3 str. Alaska E43]
Length = 321
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 75/144 (52%), Gaps = 23/144 (15%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS--- 162
+++ ++++ + WRL+ C +LH G+ HLL NM +L +G ++E+ FG + +Y +S
Sbjct: 174 KYNPLIYQGEVWRLVACAFLHGGITHLLFNMYALYILGPQVEKIFGIKKYLIIYFVSAIT 233
Query: 163 ---------------GFGGAYY----LLFLFNAVSLLVLLAAALLTLVVIIAINLAVGI- 202
G GA + + +F+ + +L L+ +I +NL +G
Sbjct: 234 SSSLGVALNKNTISVGASGAIFGLLGAILVFSIKQRHKVEKEYILNLLGVIILNLLIGFN 293
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLL 226
+ ++DN HIGGF+ G ++ +L+
Sbjct: 294 ISNIDNLGHIGGFLGGIIMARILI 317
>gi|325264281|ref|ZP_08131012.1| putative small hydrophobic molecule transporter protein
[Clostridium sp. D5]
gi|324030352|gb|EGB91636.1| putative small hydrophobic molecule transporter protein
[Clostridium sp. D5]
Length = 223
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 83/170 (48%), Gaps = 29/170 (17%)
Query: 90 PLFGPSSSTLQKL--GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
+ G + +L L GA+ VV HQ +R+ T ++LH G+ HLL NM+ L +G LE
Sbjct: 47 SVLGATEDSLFMLEHGAMYEPYVVEGHQYYRMFTSLFLHFGIEHLLNNMVLLGALGWNLE 106
Query: 148 QQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVL----------LAAALLTLVV----- 192
+ G ++ +Y +SG GG L++ + +V+ L ALL +V+
Sbjct: 107 LETGRIKFLIIYFISGLGGNMLSLWMNMSTDKMVVSAGASGAIFGLMGALLCVVLKNHGR 166
Query: 193 -----------IIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQ 230
++ ++L G VDN AHIGG + GF++ VL RP+
Sbjct: 167 VGRLTNRGLLFMVVLSLYFGFTSSGVDNAAHIGGLVCGFVMAAVLYRRPK 216
>gi|351696488|gb|EHA99406.1| Rhomboid family member 2 [Heterocephalus glaber]
Length = 855
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 652 QFYRLWLSLFLHAGLVHCLVSVIFQMTILRDLEKLAGWHRIAIIFVLSGITGNLASAIFL 711
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L I+ G+LP +DN A
Sbjct: 712 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFVCGLLPWIDNIA 771
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L+ G
Sbjct: 772 HIFGFLSGMLLAFAFLPYITFGTSDK---------------YRKRALILVSLLVFAGLFA 816
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 817 SLVLWLYIYPIN--WPWIEYLTCFPFTSHFC 845
>gi|90961526|ref|YP_535442.1| rhomboid family integral membrane protein [Lactobacillus salivarius
UCC118]
gi|385840241|ref|YP_005863565.1| Integral membrane protein, Rhomboid family [Lactobacillus
salivarius CECT 5713]
gi|90820720|gb|ABD99359.1| Integral membrane protein, Rhomboid family [Lactobacillus
salivarius UCC118]
gi|300214362|gb|ADJ78778.1| Integral membrane protein, Rhomboid family [Lactobacillus
salivarius CECT 5713]
Length = 220
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 32/182 (17%)
Query: 91 LFGPSS--STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
LFG + + L + GA ++ + Q WRLIT +++H G+ HLL NM++L F+G LE
Sbjct: 28 LFGGTENIANLVRFGA-KYSPYIINGQYWRLITPMFIHIGLQHLLINMITLYFLGTLLEN 86
Query: 149 QFGFVRVGFVYLLSGF-GGAYYLLFLFNAVS------LLVLLAAALL------------- 188
FG R +YL+SG G F F+++S L + + L+
Sbjct: 87 IFGKTRFLIIYLVSGICGNIASFAFNFSSISAGASTALFGMFGSFLMLGESFRRNPYLQT 146
Query: 189 ---TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+++ +N+ G+ + D H+GG ++GFLLG+V+ G ++P R+
Sbjct: 147 MSRQFFLLVILNIFFGMFGNSDLAGHLGGLVSGFLLGYVV------GVPNLGRVPKVKRI 200
Query: 246 KS 247
S
Sbjct: 201 VS 202
>gi|397576168|gb|EJK50102.1| hypothetical protein THAOC_30966 [Thalassiosira oceanica]
Length = 527
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 71/154 (46%), Gaps = 27/154 (17%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA D ++ Q RLIT ++LH G+ HL++N SL +G +E FG R YL+S
Sbjct: 232 GAKRSDLLLEGRQLHRLITPVFLHGGIGHLVSNSYSLKSMGNNVEGAFGPARTLATYLVS 291
Query: 163 G----------------------FG--GAYYLLFLFNAVSLLVLLAAALLTLVVIIAINL 198
G FG GAYY N+ A L+ I INL
Sbjct: 292 GVAGNIFSAVNSPNPAVGASGAIFGLVGAYYTFLARNSEIFGHSGRAQKGALLETIGINL 351
Query: 199 AVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+G+ P +DN+ H+GGF+ G +G L+ P+
Sbjct: 352 VLGMTNPVIDNWGHLGGFIGG--VGMSWLIGPKL 383
>gi|445383054|ref|ZP_21427373.1| hypothetical protein IQ5_08616 [Streptococcus thermophilus MTCC
5460]
gi|445395945|ref|ZP_21429103.1| hypothetical protein IQ7_08672 [Streptococcus thermophilus MTCC
5461]
gi|444748296|gb|ELW73272.1| hypothetical protein IQ7_08672 [Streptococcus thermophilus MTCC
5461]
gi|444748403|gb|ELW73372.1| hypothetical protein IQ5_08616 [Streptococcus thermophilus MTCC
5460]
Length = 224
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 67/205 (32%), Positives = 97/205 (47%), Gaps = 36/205 (17%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEH-QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
N S +L K+GA+ V + + WRLIT I++H GV H L NML+L F+G E
Sbjct: 30 NSFQATSPLSLFKMGAMFGTFVQYNPLELWRLITPIFVHIGVEHFLFNMLTLYFMGRMAE 89
Query: 148 QQFGFVRVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL------------ 188
Q FG +R +YLLSG G A+ LLF N + SL L AA ++
Sbjct: 90 QIFGTLRFLGLYLLSGVMGNAFTLLFTPNVIAAGASTSLFGLFAAIVILGYYSHSPLLNQ 149
Query: 189 ---TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+ +I INL + P V H+GG + G L L A + ++R
Sbjct: 150 LSRNYLALIVINLIFNLFTPSVGITGHLGGLVGGALAAIFL--------ANK----VESR 197
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFT 269
+ S+ + L V L+L+++GFT
Sbjct: 198 LFSKGWRFTSFLIYVTLLLIVLGFT 222
>gi|47214956|emb|CAG10778.1| unnamed protein product [Tetraodon nigroviridis]
Length = 903
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/193 (29%), Positives = 89/193 (46%), Gaps = 22/193 (11%)
Query: 109 RVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-A 167
R + + GW I+ I++ +G+ N+ S +F+ R E G V + S FG A
Sbjct: 723 RDLEKLAGWVRISIIYVFSGIT---GNLASALFLPYRAESTLGVVSLQVGPAGSQFGLLA 779
Query: 168 YYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLL 227
+ LF A +L A L L+ I+ G+LP +DN AHI GF++G LL F L
Sbjct: 780 CLFVELFQAWQMLEKPWKAFLKLLTIVLFLFLCGLLPWMDNIAHIFGFLSGLLLSFAFLP 839
Query: 228 RPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSW 287
FG +++ Y+ + I +L +G L++ F N H W
Sbjct: 840 YLTFGTSDK---------------YRKRVLIALSLLAYIGLFASLIVWFYIYPINWH--W 882
Query: 288 CHYLSCVP-TSKW 299
+L+C+P TSK+
Sbjct: 883 LEHLTCLPFTSKF 895
>gi|344291132|ref|XP_003417290.1| PREDICTED: inactive rhomboid protein 2 isoform 2 [Loxodonta
africana]
Length = 827
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ L + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELIQSWQLLERPWKAFLNLSAIVFFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L+ G
Sbjct: 744 HIFGFLSGLLLAFAFLPYITFGTSDK---------------YRKRALILVSLLVFAGLFT 788
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 789 SLVIWLYVYPIN--WPWVEYLTCFPFTSHFC 817
>gi|148657883|ref|YP_001278088.1| rhomboid family protein [Roseiflexus sp. RS-1]
gi|148569993|gb|ABQ92138.1| Rhomboid family protein [Roseiflexus sp. RS-1]
Length = 283
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 81/171 (47%), Gaps = 27/171 (15%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA E + Q +R +T ++LH + HL N +L +G E+ FG R +YL++
Sbjct: 86 GAKENAAISIGGQYYRFLTAMFLHGSIAHLFFNSFALYSLGFEAERIFGSQRFLALYLIA 145
Query: 163 GFGGAYY---------------LLFLFNAVSLLVLLAAALL---------TLVVIIAINL 198
G GG + L A+ ++A ++L +L+ ++ INL
Sbjct: 146 GLGGGVMSYAFNPNPSVGASGAIFGLIGALIAFYVVARSVLGGIARQQLGSLIFVVMINL 205
Query: 199 AVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSR 248
A+G P++DN AHIGG + G ++G+ LL P+F R P R+ R
Sbjct: 206 ALGFTSPYIDNNAHIGGLLTGAVIGW--LLAPRFALDPRSYPPTVVRLGLR 254
>gi|110803398|ref|YP_698757.1| rhomboid family protein [Clostridium perfringens SM101]
gi|110683899|gb|ABG87269.1| rhomboid family protein [Clostridium perfringens SM101]
Length = 342
Score = 62.4 bits (150), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 81/144 (56%), Gaps = 24/144 (16%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+GA + ++ + +RL+T ++LH+G++HLL NM +L +G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHSGIVHLLFNMYALYILGDFIERIYGAKKYLVIYFV 248
Query: 162 SGFGGAYYLLFLFNAV-------SLLVLLAAALL---------------TLVVIIAINLA 199
SG + + L+ F+ V ++ LL AAL+ ++VII +N+
Sbjct: 249 SGIVASIFSLY-FSPVMGVGASGAIFGLLGAALVFAYNEKDRIGKALVTNIIVIILLNVF 307
Query: 200 VGI-LPHVDNFAHIGGFMAGFLLG 222
+G+ + ++D AH GGF+AG +LG
Sbjct: 308 IGLSMSNIDISAHFGGFIAGAILG 331
>gi|408790096|ref|ZP_11201729.1| GlpG protein (membrane protein of glp regulon) [Lactobacillus
florum 2F]
gi|408520670|gb|EKK20705.1| GlpG protein (membrane protein of glp regulon) [Lactobacillus
florum 2F]
Length = 222
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 80/154 (51%), Gaps = 24/154 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S++ L + GA + + ++ Q WRL+T I+LH G+ HLL N L+L ++G LE+ G R
Sbjct: 37 SAAVLLRYGA-QSNPLIQAGQWWRLVTPIFLHIGLQHLLLNCLTLFYVGNLLEKTVGHFR 95
Query: 155 VGFVYLLSGFGGAYY------------------LLFLFNAVSLLV----LLAAALLTLVV 192
++L SG GG + LL +F +SL+V L+ +T V
Sbjct: 96 YLVLFLGSGIGGNLFSFAAGNVISAGSSTAIFGLLGVFLMLSLVVRGNLLITETGITFAV 155
Query: 193 IIAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVL 225
+ +NL +P +D + H+GG + GF L FV+
Sbjct: 156 FVGLNLLTDFFVPQIDIWGHLGGLLTGFCLAFVV 189
>gi|359425053|ref|ZP_09216156.1| rhomboid family protein [Gordonia amarae NBRC 15530]
gi|358239633|dbj|GAB05738.1| rhomboid family protein [Gordonia amarae NBRC 15530]
Length = 299
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/152 (34%), Positives = 79/152 (51%), Gaps = 20/152 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-AYY 169
VH+ + WRL+T +LH + H+ ANMLSL +G LE G+ R VYL S GG A
Sbjct: 115 VHDGEYWRLLTAGFLHFSLTHIAANMLSLFLLGRDLELAIGYPRYAGVYLASLVGGSAAV 174
Query: 170 LLF----------------LFNAVSLLVL-LAAALLTLVVIIAINLAVGI-LPHVDNFAH 211
+LF L A+ ++VL + A+ + ++ II +N+ + I +P + AH
Sbjct: 175 MLFAGDLTINAGASGAIYGLMGAMLVIVLRMRASPVPVLSIIGLNIVLSITVPGISLAAH 234
Query: 212 IGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
+GG + G L L+ PQ +R + PA A
Sbjct: 235 LGGLLFGALATAGLIYLPQVA-GDRGRTPAGA 265
>gi|344291130|ref|XP_003417289.1| PREDICTED: inactive rhomboid protein 2 isoform 1 [Loxodonta
africana]
Length = 860
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 657 QFYRLWLSLFLHAGVVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 716
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ L + LL A L L I+ G+LP +DN A
Sbjct: 717 PYRAEVGPAGSQFGLLACLFVELIQSWQLLERPWKAFLNLSAIVFFLFICGLLPWIDNIA 776
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L+ G
Sbjct: 777 HIFGFLSGLLLAFAFLPYITFGTSDK---------------YRKRALILVSLLVFAGLFT 821
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 822 SLVIWLYVYPIN--WPWVEYLTCFPFTSHFC 850
>gi|227904420|ref|ZP_04022225.1| Rhomboid family protein [Lactobacillus acidophilus ATCC 4796]
gi|227867795|gb|EEJ75216.1| Rhomboid family protein [Lactobacillus acidophilus ATCC 4796]
Length = 226
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 52/154 (33%), Positives = 80/154 (51%), Gaps = 25/154 (16%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L K+GA+ VV HQ WRL T +LH GV+HL++N + + ++G +E G R
Sbjct: 37 NVLMKMGAMNNFAVVAGHQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYMEPIMGHTRFL 96
Query: 157 FVYLLSGFGG-----------------AYYLLFLFNAVSLLVL------LAAALLTLVVI 193
YLL+ GG + L LF A++ + L + + L ++
Sbjct: 97 VTYLLAEIGGNLMSLAFSADRGLSAGASTALFGLFGAMTAIGLRNFRNPMISYLGRQALV 156
Query: 194 IA-INLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
+A INLA+ I +P +D + HIGG +AGFLL +L
Sbjct: 157 LALINLALDIFVPGIDIWGHIGGLIAGFLLAIIL 190
>gi|264681541|ref|NP_766160.2| inactive rhomboid protein 2 [Mus musculus]
gi|264681547|ref|NP_001161152.1| inactive rhomboid protein 2 [Mus musculus]
gi|81873327|sp|Q80WQ6.1|RHDF2_MOUSE RecName: Full=Inactive rhomboid protein 2; Short=iRhom2; AltName:
Full=Rhomboid family member 2; AltName: Full=Rhomboid
veinlet-like protein 6; AltName: Full=Rhomboid-related
protein
gi|30354647|gb|AAH52182.1| Rhomboid 5 homolog 2 (Drosophila) [Mus musculus]
gi|37726547|gb|AAO34122.1| rhomboid-related protein [Mus musculus]
gi|148702639|gb|EDL34586.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_a [Mus musculus]
Length = 827
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +R+ ++LHAG++H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 624 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 683
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L+ G
Sbjct: 744 HIFGFLSGMLLAFAFLPYITFGTSDK---------------YRKRALILVSLLVFAGLFA 788
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 789 SLVLWLYIYPIN--WPWIEYLTCFPFTSRFC 817
>gi|301300052|ref|ZP_07206273.1| peptidase, S54 family [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852350|gb|EFK80013.1| peptidase, S54 family [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 220
Score = 62.0 bits (149), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 53/182 (29%), Positives = 89/182 (48%), Gaps = 32/182 (17%)
Query: 91 LFGPSSS--TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
LFG + + L + GA ++ + Q WRLIT +++H G+ HLL NM++L F+G LE
Sbjct: 28 LFGGTENIVNLVRFGA-KYSPYIINGQYWRLITPMFIHIGLQHLLINMITLYFLGTLLEN 86
Query: 149 QFGFVRVGFVYLLSGF-GGAYYLLFLFNAVS------LLVLLAAALL------------- 188
FG R +YL+SG G F F+++S L + + L+
Sbjct: 87 IFGKTRFLIIYLVSGICGNIASFAFNFSSISAGASTALFGMFGSFLMLGESFRRNPYLQT 146
Query: 189 ---TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+++ +N+ G+ + D H+GG ++GFLLG+V+ G ++P R+
Sbjct: 147 MSRQFFLLVILNIFFGMFGNSDLAGHLGGLVSGFLLGYVV------GVPNLGRVPKVKRI 200
Query: 246 KS 247
S
Sbjct: 201 VS 202
>gi|354489445|ref|XP_003506873.1| PREDICTED: inactive rhomboid protein 2 [Cricetulus griseus]
Length = 825
Score = 62.0 bits (149), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +R+ ++LHAG++H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 622 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 681
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L I+ G+LP +DN A
Sbjct: 682 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 741
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+A +L+ G
Sbjct: 742 HIFGFLSGMLLAFAFLPYITFGTSDK---------------YRKRALILASLLVFAGLFA 786
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W +L+C P + C
Sbjct: 787 SLVLWLYIYPIN--WPWIEHLTCFPFTSRFC 815
>gi|209876404|ref|XP_002139644.1| rhomboid family protein [Cryptosporidium muris RN66]
gi|209555250|gb|EEA05295.1| rhomboid family protein [Cryptosporidium muris RN66]
Length = 469
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 25/159 (15%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIR 145
L +N L GP + + +GAL+ + ++ + Q RL WLH G++HL N+LS + +G+
Sbjct: 140 LSDNSLLGPPAQVIFNMGALDTN-LIRQGQISRLFWSFWLHTGLLHLAINVLSQIALGVI 198
Query: 146 LEQQFGFVRVGFVYLLSGFGGAYYLLFLF-------NAVSLLVLLAAALLTLV------- 191
LE ++ R +Y + G G L ++ LLA ++ L+
Sbjct: 199 LETRWVVWRYIILYYIGGLVGNLASAVLDPCSISAGSSACFFALLAGVIVMLLENWKHTN 258
Query: 192 ----VIIAINLA------VGILPHVDNFAHIGGFMAGFL 220
+I+I LA + + + DN+AHIGGF AGFL
Sbjct: 259 WQFFYVISICLATLLGISLSFMSNTDNWAHIGGFTAGFL 297
>gi|331092038|ref|ZP_08340869.1| hypothetical protein HMPREF9477_01512 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330402239|gb|EGG81810.1| hypothetical protein HMPREF9477_01512 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 203
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 33/177 (18%)
Query: 81 LSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLV 140
LSF + E+ S + + GA+ V+ H+ +RLIT I+LH G HL+ NM+ L
Sbjct: 24 LSFFGMTED------GSYMLEHGAMFVPLVLGNHEYYRLITSIFLHFGFAHLMNNMVMLF 77
Query: 141 FIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAA-------LLTLVVI 193
F+G LE++ G + +Y +SG G F+ V+ A A + L++I
Sbjct: 78 FLGSILEEEIGSFKYLLLYFVSGVAGNILSAFMDLKTGEFVISAGASGAIFGVIGALLII 137
Query: 194 IAIN--------------LAVGILPH------VDNFAHIGGFMAGFLLGFVLLLRPQ 230
+ N + V L H VDN AHIGG ++G LL F+L + Q
Sbjct: 138 VTKNHGHLRTLDGRGMVFMVVCSLYHGFTSTGVDNMAHIGGLLSGILLAFILYRKRQ 194
>gi|148702640|gb|EDL34587.1| rhomboid 5 homolog 2 (Drosophila), isoform CRA_b [Mus musculus]
Length = 888
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 90/211 (42%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +R+ ++LHAG++H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 685 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 744
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L I+ G+LP +DN A
Sbjct: 745 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 804
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++ Y+ I+ +L+ G
Sbjct: 805 HIFGFLSGMLLAFAFLPYITFGTSDK---------------YRKRALILVSLLVFAGLFA 849
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 850 SLVLWLYIYPIN--WPWIEYLTCFPFTSRFC 878
>gi|116748348|ref|YP_845035.1| rhomboid family protein [Syntrophobacter fumaroxidans MPOB]
gi|116697412|gb|ABK16600.1| Rhomboid family protein [Syntrophobacter fumaroxidans MPOB]
Length = 284
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/217 (28%), Positives = 100/217 (46%), Gaps = 44/217 (20%)
Query: 89 NPL--FGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
NPL P S +L LGA + + W L++ +LH ++H+L NM++ I +
Sbjct: 80 NPLNFLSPGSRSLLLLGATGRIPIDQFDRWWTLLSASYLHGSILHILFNMMAFSQIAPLI 139
Query: 147 EQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVV-------------- 192
++G R +Y LSG GG Y+L F ++ + +AA+ L+
Sbjct: 140 VHEYGASRTLAIYTLSGIGG--YVLSYFAGTAVTLGASAAVCGLIGAALYYGRSRGGQFG 197
Query: 193 ----------IIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQ 242
+I + + + P +DN+AH GG + G L GFVL G+ ER P +
Sbjct: 198 QLVYRQVSGWVIGLFIFGFLFPGIDNWAHGGGLLTGILAGFVL------GYQERQ--PER 249
Query: 243 ARVKSRHNPYQYVLCIVALVLLIVGFTVG--LVMLFR 277
K+ N LC++A L +V + VG +++FR
Sbjct: 250 LLHKTVGN-----LCVIATALTLV-YAVGTSFLIIFR 280
>gi|375088668|ref|ZP_09735006.1| hypothetical protein HMPREF9703_01088 [Dolosigranulum pigrum ATCC
51524]
gi|374561633|gb|EHR32972.1| hypothetical protein HMPREF9703_01088 [Dolosigranulum pigrum ATCC
51524]
Length = 232
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 82/165 (49%), Gaps = 29/165 (17%)
Query: 91 LFGPSSS--TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
FG S + +L +GA + +++ ++ WRLIT I+LH GV HLL NML + F+G ++E
Sbjct: 33 FFGGSENIESLIIMGAKFNELIIYNNEWWRLITPIFLHIGVPHLLFNMLVVYFLGQQIEF 92
Query: 149 QFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVV---------------- 192
FG VR +YL SG G + F FN SL + A+ L V
Sbjct: 93 IFGHVRFALLYLFSGLMGNAF-SFAFNT-SLSAGASTAIFGLFVSTIVLSKLFPHVRELG 150
Query: 193 --------IIAINLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLR 228
+I +N+ + VDN HIGG + G+L+ + + ++
Sbjct: 151 MLARQYGMLIFLNIVFSFMSGGVDNMGHIGGLVGGYLISYAISVK 195
>gi|116333635|ref|YP_795162.1| membrane-associated serine protease [Lactobacillus brevis ATCC 367]
gi|116098982|gb|ABJ64131.1| Membrane-associated serine protease [Lactobacillus brevis ATCC 367]
Length = 226
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 81/161 (50%), Gaps = 25/161 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S + L GA + + ++ + Q WRLIT ++LH G H+ NM++L F+G +LE FG R
Sbjct: 40 SLNVLVAFGA-KVNPLIQQGQWWRLITPMFLHIGFTHIFLNMVTLYFVGTQLEAAFGHAR 98
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVS------LLVLLAAALL----------------TLVV 192
++L++G GG N++S + L A ++ T +
Sbjct: 99 FLIIFLVAGIGGNVASFCFLNSLSAGASTAIFGLFGAFMMLGESFWQNPIIRQLARTFLA 158
Query: 193 IIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
+ +N+A + P +D H+GG +AGFL+ + + + PQ G
Sbjct: 159 FVVMNIAFDLFTPGIDLAGHLGGLIAGFLVAYTVGV-PQIG 198
>gi|238853801|ref|ZP_04644167.1| membrane-associated serine protease [Lactobacillus gasseri 202-4]
gi|238833610|gb|EEQ25881.1| membrane-associated serine protease [Lactobacillus gasseri 202-4]
Length = 228
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/174 (33%), Positives = 82/174 (47%), Gaps = 31/174 (17%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+TL +LGA+ V EHQ WRL T +LH G +H+ +N + + ++G +E G R
Sbjct: 39 NTLLRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYVGQFMEPLLGHWRFL 98
Query: 157 FVYLLSGFGG-----AY------------YLLFLFNAVSLLVLLAAALLTL-------VV 192
VYLLSG GG AY L LF V L L A+ + +
Sbjct: 99 SVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLGKQALA 158
Query: 193 IIAINLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+ INLA+ + H+D H+G ++GFLLG + FG A Q + RV
Sbjct: 159 LAIINLALDLFASHIDILGHLGDLISGFLLGII------FGSAHLRQYHHKLRV 206
>gi|91776194|ref|YP_545950.1| rhomboid-like protein [Methylobacillus flagellatus KT]
gi|91710181|gb|ABE50109.1| Rhomboid-like protein [Methylobacillus flagellatus KT]
Length = 356
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 80/167 (47%), Gaps = 30/167 (17%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P++ LQ + + + WRL T ++LH G +HL NM++ G +E+ +G
Sbjct: 50 PNNVQLQLAWGANFGPATQDGEWWRLFTALFLHFGAVHLALNMIAFWDGGQLVERMYGHW 109
Query: 154 RVGFVYLLSGF----------------GGAYYLLF-LFNAVSLLVLLAAALLT------- 189
R +YL+SG GGA +F ++ A+ + + ALL
Sbjct: 110 RYLVIYLVSGLVGNLLSLVWQGNQAVSGGASGAIFGIYGALIVFLWQERALLDRREFRWL 169
Query: 190 ---LVVIIAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLL--LRPQ 230
V +A+G ++P +DN AHIGGF+AG L G +L+ LRPQ
Sbjct: 170 FGGACVFATATIALGFMIPAIDNAAHIGGFVAGMLAGLLLMRGLRPQ 216
>gi|383761642|ref|YP_005440624.1| rhomboid family protein [Caldilinea aerophila DSM 14535 = NBRC
104270]
gi|381381910|dbj|BAL98726.1| rhomboid family protein [Caldilinea aerophila DSM 14535 = NBRC
104270]
Length = 260
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 77/152 (50%), Gaps = 33/152 (21%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY------- 169
WRL+T I+LH+GV+HLL N+ +L +G LE G VR V+L+SG G +
Sbjct: 70 WRLVTPIFLHSGVMHLLFNLYALYILGPMLEGYIGHVRFLAVFLISGLYGTLFSYALSGP 129
Query: 170 --------LLFLFNAVSLLVLL---------AAALLTLVVIIAINLAVGI-LPHVDNFAH 211
+ L A++L L A L +++I+A+NL +G ++DN+ H
Sbjct: 130 VSVGASGAIFGLLGAIALFFLRYRDNFGPQGRAILQNMLIILALNLVIGFSSSYIDNWGH 189
Query: 212 IGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
IGG + G FV+L G R++ PA A
Sbjct: 190 IGGLIGG---AFVML-----GVMPRYRSPASA 213
>gi|291521749|emb|CBK80042.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Coprococcus catus GD/7]
Length = 211
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 76/156 (48%), Gaps = 27/156 (17%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA W ++ EH+ +RL+TC ++H G+ HL NML L +IG LE+ G + VYL +
Sbjct: 50 GASFWPAIIEEHEYYRLLTCTFIHFGISHLFNNMLVLAYIGDNLERALGKFKYLIVYLAA 109
Query: 163 GFG-------------------GAYYLLF-LFNAVSLLVLLAAALLT------LVVIIAI 196
G G GA +F + A+ ++V+ L L++
Sbjct: 110 GVGSSAVSAVWSMIKDEYSVSGGASGAIFGVVGALLVIVIRNRGQLEDLNSRQLMLFAGF 169
Query: 197 NLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQF 231
++ G+ +DN AHI GF+ G LLG +L R ++
Sbjct: 170 SIYHGVTSAGIDNMAHISGFVIGALLGGLLYRRKRY 205
>gi|386345548|ref|YP_006041712.1| hypothetical protein STH8232_2117 [Streptococcus thermophilus JIM
8232]
gi|339279009|emb|CCC20757.1| hypothetical protein STH8232_2117 [Streptococcus thermophilus JIM
8232]
Length = 224
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 36/205 (17%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEH-QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
N S +L K+GA+ V + + WRLIT I++H GV H L NML+L F+G E
Sbjct: 30 NSFQATSPLSLFKMGAMFGTFVQYNPLELWRLITPIFVHIGVEHFLFNMLTLYFMGRMAE 89
Query: 148 QQFGFVRVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL------------ 188
Q FG +R +YLL+G G A+ LLF N + SL L AA ++
Sbjct: 90 QIFGTLRFLGLYLLAGVMGNAFTLLFTPNVIAAGASTSLFGLFAAIVIIGYYSHSPLLNQ 149
Query: 189 ---TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+ +I INL + P V H+GG + G L L A + ++R
Sbjct: 150 LGRNYLALIVINLIFNLFTPSVGITGHLGGLVGGALAAIFL--------ANK----VESR 197
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFT 269
+ S+ + L V L+L+++GFT
Sbjct: 198 LFSKGWRFTSFLTYVTLLLIVLGFT 222
>gi|256850860|ref|ZP_05556249.1| membrane-associated serine protease [Lactobacillus jensenii
27-2-CHN]
gi|260661071|ref|ZP_05861985.1| membrane-associated serine protease [Lactobacillus jensenii
115-3-CHN]
gi|256615922|gb|EEU21110.1| membrane-associated serine protease [Lactobacillus jensenii
27-2-CHN]
gi|260548008|gb|EEX23984.1| membrane-associated serine protease [Lactobacillus jensenii
115-3-CHN]
Length = 215
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/157 (35%), Positives = 77/157 (49%), Gaps = 25/157 (15%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+ L KLGA V+ Q WRL T +LH G++HL+ N ++L ++G LE G V
Sbjct: 23 EDSAVLFKLGAQFNPAVIILGQWWRLFTAQFLHIGLLHLVVNCVTLFYMGQYLEPMLGHV 82
Query: 154 RVGFVYLLSGFGGAYYLLFL--FNAVS-----LLVLLAAALLTL---------------- 190
R +YLL+G GG + NAVS L L A++ L
Sbjct: 83 RFLIIYLLAGVGGNLMTMAFGSDNAVSAGASTALFGLFGAMIALGIANRTHEGMAYLGRQ 142
Query: 191 -VVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
V+ INL I +P +D + H+GG +AGFLL +L
Sbjct: 143 SFVLAVINLLFDINVPQIDTWGHVGGLIAGFLLTVIL 179
>gi|433629203|ref|YP_007262831.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070010]
gi|432160796|emb|CCK58126.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070010]
Length = 249
Score = 61.6 bits (148), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/192 (32%), Positives = 88/192 (45%), Gaps = 32/192 (16%)
Query: 107 WDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG 166
W V Q +RL+T +LH G +HLL NM +L +G LE G +R G +Y +S GG
Sbjct: 67 WPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGG 126
Query: 167 A--YYLLFLFNAVS------LLVLLAAALLT----------LVVIIAINLAVGIL-PHVD 207
+ YL+ N + + L A + +V +I INLA L P +
Sbjct: 127 SVLVYLIAPLNTATAGASGAVFGLFGATFMVARRLHLDVRWVVALIVINLAFTFLAPAIS 186
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
H+GG + G L+G + P+ ER L QA V + +VA V+LI
Sbjct: 187 WQGHVGGLVTGALVGATYVYAPR----ERRNL-IQATVT--------ITVLVAFVVLIGW 233
Query: 268 FTVGLVMLFRGE 279
TV L+ LF G
Sbjct: 234 RTVDLLALFGGR 245
>gi|328714292|ref|XP_003245324.1| PREDICTED: rhomboid family member 1-like isoform 2 [Acyrthosiphon
pisum]
Length = 1358
Score = 61.6 bits (148), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL +++HAG++HL ++ F+ LE+ G +R+ +YL SG G
Sbjct: 1150 QFYRLWISLFIHAGILHLATTIVIQYFLMRDLEKLTGSLRIALIYLGSGVAGNLGSAIFV 1209
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A ++ + N +L AL L+ I + +G+LP VDNFA
Sbjct: 1210 PYRADVGPAGSQFGLLACLIVEVLNCWPMLKRPEQALSKLLAITFLLFLLGLLPWVDNFA 1269
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
H+ GF+ GFLL + LL FG +R +
Sbjct: 1270 HLFGFIFGFLLSYALLPFVSFGPYDRQK 1297
>gi|328714294|ref|XP_001950020.2| PREDICTED: rhomboid family member 1-like isoform 1 [Acyrthosiphon
pisum]
Length = 1386
Score = 61.2 bits (147), Expect = 5e-07, Method: Composition-based stats.
Identities = 45/148 (30%), Positives = 71/148 (47%), Gaps = 24/148 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL +++HAG++HL ++ F+ LE+ G +R+ +YL SG G
Sbjct: 1178 QFYRLWISLFIHAGILHLATTIVIQYFLMRDLEKLTGSLRIALIYLGSGVAGNLGSAIFV 1237
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A ++ + N +L AL L+ I + +G+LP VDNFA
Sbjct: 1238 PYRADVGPAGSQFGLLACLIVEVLNCWPMLKRPEQALSKLLAITFLLFLLGLLPWVDNFA 1297
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
H+ GF+ GFLL + LL FG +R +
Sbjct: 1298 HLFGFIFGFLLSYALLPFVSFGPYDRQK 1325
>gi|21595108|gb|AAH31398.1| Rhbdf2 protein, partial [Mus musculus]
Length = 607
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/211 (26%), Positives = 91/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +R+ ++LHAG++H L +++ + I LE+ G+ R+ +++LSG G
Sbjct: 404 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 463
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + LF + LL A L I+ G+LP +DN A
Sbjct: 464 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 523
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ + L +V+L L+ G
Sbjct: 524 HIFGFLSGMLLAFAFLPYITFGTSDKYR--------------KRALILVSL-LVFAGLFA 568
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 569 SLVLWLYIYPIN--WPWIEYLTCFPFTSRFC 597
>gi|366089319|ref|ZP_09455792.1| membrane-associated serine protease [Lactobacillus acidipiscis KCTC
13900]
Length = 217
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 91/184 (49%), Gaps = 36/184 (19%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
++++ + + WRL T +++H G+ H++ NM++L FIGI++E FG R +YL+SG GG
Sbjct: 44 NQLIGQGEWWRLFTPMFIHIGLQHIVLNMVTLYFIGIQIEAVFGKWRFVILYLISGLGGN 103
Query: 168 YYLLFLFN-------AVSLLVLLAAALL----------------TLVVIIAINLAVGILP 204
F+F+ + S+ L A L+ ++++ +NL +G
Sbjct: 104 -IASFVFSPSISAGASTSIFGLFGAFLMLGESYRQNPYIRATAKQFLILVILNLGLG-FT 161
Query: 205 HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLL 264
+D HIGG +AGFL +VL G ++P ++ + L I+ +L
Sbjct: 162 GIDIAGHIGGLLAGFLTAYVL------GTPNLEKIPTNKKILAGA-----ALVIIYGILA 210
Query: 265 IVGF 268
+ GF
Sbjct: 211 VAGF 214
>gi|15839491|ref|NP_334528.1| rhomboid family protein [Mycobacterium tuberculosis CDC1551]
gi|148821302|ref|YP_001286056.1| integral membrane protein [Mycobacterium tuberculosis F11]
gi|253797028|ref|YP_003030029.1| hypothetical protein TBMG_00111 [Mycobacterium tuberculosis KZN
1435]
gi|254233504|ref|ZP_04926830.1| hypothetical protein TBCG_00110 [Mycobacterium tuberculosis C]
gi|289445640|ref|ZP_06435384.1| rhomboid family protein [Mycobacterium tuberculosis CPHL_A]
gi|289747877|ref|ZP_06507255.1| rhomboid family protein [Mycobacterium tuberculosis 02_1987]
gi|308378549|ref|ZP_07482957.2| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308394636|ref|ZP_07491694.2| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|375294312|ref|YP_005098579.1| hypothetical protein TBSG_00111 [Mycobacterium tuberculosis KZN
4207]
gi|392430521|ref|YP_006471565.1| hypothetical protein TBXG_000111 [Mycobacterium tuberculosis KZN
605]
gi|422815296|ref|ZP_16863514.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|13879598|gb|AAK44342.1| Rhomboid family protein [Mycobacterium tuberculosis CDC1551]
gi|124603297|gb|EAY61572.1| hypothetical protein TBCG_00110 [Mycobacterium tuberculosis C]
gi|148719829|gb|ABR04454.1| conserved integral membrane protein [Mycobacterium tuberculosis
F11]
gi|253318531|gb|ACT23134.1| conserved membrane protein [Mycobacterium tuberculosis KZN 1435]
gi|289418598|gb|EFD15799.1| rhomboid family protein [Mycobacterium tuberculosis CPHL_A]
gi|289688405|gb|EFD55893.1| rhomboid family protein [Mycobacterium tuberculosis 02_1987]
gi|308197784|gb|ADO17908.1| rhomboid protease 1 [Mycobacterium tuberculosis H37Rv]
gi|308197788|gb|ADO17910.1| rhomboid protease 1 [Mycobacterium tuberculosis]
gi|308197792|gb|ADO17912.1| rhomboid protease 1 [Mycobacterium bovis BCG]
gi|308197796|gb|ADO17914.1| rhomboid protease 1 [Mycobacterium bovis]
gi|308352202|gb|EFP41053.1| conserved membrane protein [Mycobacterium tuberculosis SUMu009]
gi|308367674|gb|EFP56525.1| conserved membrane protein [Mycobacterium tuberculosis SUMu012]
gi|323717250|gb|EGB26458.1| membrane protein [Mycobacterium tuberculosis CDC1551A]
gi|328456817|gb|AEB02240.1| conserved membrane protein [Mycobacterium tuberculosis KZN 4207]
gi|392051930|gb|AFM47488.1| conserved membrane protein [Mycobacterium tuberculosis KZN 605]
Length = 284
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 107 WDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG 166
W V Q +RL+T +LH G +HLL NM +L +G LE G +R G +Y +S GG
Sbjct: 102 WPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGG 161
Query: 167 A--YYLLFLFNAVS------LLVLLAAALLT----------LVVIIAINLAVGIL-PHVD 207
+ YL+ N + + L A + +V +I INLA L P +
Sbjct: 162 SVLVYLIAPLNTATAGASGAVFGLFGATFMVARRLHLDVRWVVALIVINLAFTFLAPAIS 221
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
H+GG + G L+ + P+ ER L QA V + +VA V+LI
Sbjct: 222 WQGHVGGLVTGALVAATYVYAPR----ERRNL-IQATVT--------ITVLVAFVVLIGW 268
Query: 268 FTVGLVMLFRGE 279
TV L+ LF G
Sbjct: 269 RTVDLLALFGGR 280
>gi|395825880|ref|XP_003786148.1| PREDICTED: inactive rhomboid protein 2 [Otolemur garnettii]
Length = 829
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAGV+H +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 626 QFYRLWLSLFLHAGVVHCFVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 685
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L I+ G+LP +DN A
Sbjct: 686 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 745
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ + VL +V+L L G
Sbjct: 746 HIFGFLSGLLLAFAFLPYITFGTSDKYR--------------KRVLILVSL-LAFAGLFA 790
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W +L+C P + C
Sbjct: 791 SLVLWLYIYPIN--WPWVEFLTCFPFTSRFC 819
>gi|224369448|ref|YP_002603612.1| putative rhomboid-family protein (ventrhoid transmembrane protein)
[Desulfobacterium autotrophicum HRM2]
gi|223692165|gb|ACN15448.1| putative rhomboid-family protein (ventrhoid transmembrane protein)
[Desulfobacterium autotrophicum HRM2]
Length = 239
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 36/203 (17%)
Query: 74 VARFLGRLSFE----PLKENPL--FGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHA 127
VA F+ L+ + NP F PS + L LGA + H H+ W LI+ WLH
Sbjct: 21 VALFVASLALSGREIQISLNPFTAFSPSMNALIFLGATGTIPIDHYHEWWSLISANWLHG 80
Query: 128 GVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFN-------AVSLL 180
++H+L NM +LV I + +G R+ +Y + G G +YL +L + ++
Sbjct: 81 SLVHILFNMTALVQIAPLIIHAYGISRMLAIYAIGGTLG-FYLSYLAGVGVTIGASAAIC 139
Query: 181 VLLAAALL----------------TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
L+ AAL T ++++ + ++P ++N+ H GG +AG LG++
Sbjct: 140 ALIGAALYFGKSRGGDFGKAVYKQTTGWVVSLAVIGLLIPSINNWGHGGGVVAGIFLGWL 199
Query: 225 LLLRPQFGWAERHQLPAQARVKS 247
L G+ ER Q A R+ +
Sbjct: 200 L------GYNERKQENAGHRIAA 216
>gi|326432700|gb|EGD78270.1| hypothetical protein PTSG_09335 [Salpingoeca sp. ATCC 50818]
Length = 475
Score = 61.2 bits (147), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 48/204 (23%), Positives = 85/204 (41%), Gaps = 38/204 (18%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFL 173
Q +RLI ++ G +H L +L+ + +G+ LE+ G+ R+ +YL+S GG + L
Sbjct: 266 DQWYRLILAPFVPVGAVHHLVFLLAQLSLGVPLERAIGWTRLALIYLVSAIGGYTIAIIL 325
Query: 174 ------------------------FNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNF 209
F + +V L L+++ G+LP VDNF
Sbjct: 326 APYQVKAGPSPGVYGLLACLLLQLFESWKQVVSPGRELFKLLLLTTCAFIFGLLPFVDNF 385
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
+ + GF+ G F L P + + A+ R+ + I+ L ++ F
Sbjct: 386 SQLAGFVFGIAASFAFL--PWQSFTSKSFYRARKRIAT----------IIGLGAVVAMFA 433
Query: 270 VGLVMLFRGENGNDHCSWCHYLSC 293
+ + MLF G+ + C C +C
Sbjct: 434 LAIPMLFTGQTAD--CPQCWRFNC 455
>gi|414872601|tpg|DAA51158.1| TPA: hypothetical protein ZEAMMB73_303498, partial [Zea mays]
Length = 490
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/40 (77%), Positives = 34/40 (85%), Gaps = 1/40 (2%)
Query: 122 CIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR-VGFVYL 160
C WLHAG+IHL+ NMLSL+FIGIRLEQQFGFV VG V L
Sbjct: 206 CNWLHAGLIHLVVNMLSLLFIGIRLEQQFGFVHSVGSVAL 245
>gi|227889556|ref|ZP_04007361.1| S54 family peptidase [Lactobacillus johnsonii ATCC 33200]
gi|227849858|gb|EEJ59944.1| S54 family peptidase [Lactobacillus johnsonii ATCC 33200]
Length = 228
Score = 61.2 bits (147), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 62/187 (33%), Positives = 89/187 (47%), Gaps = 38/187 (20%)
Query: 88 ENPLFGPSS-STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
E + G ++ + L +LGA+ V EHQ WRL T +LH G +H+ +N + + ++G +
Sbjct: 29 ETMMGGSTNINILVRLGAMNNQLVTVEHQWWRLFTAQFLHIGWLHIASNAVMIYYMGQFM 88
Query: 147 EQQFGFVRVGFVYLLSGFGG-----AY------------YLLFLFNAVSLLVLLAAAL-- 187
E G R VYLLSG GG AY L LF V L L A+
Sbjct: 89 EPLLGHWRFLTVYLLSGIGGNLLSYAYGSDSVVSAGASTALFGLFGVVIALYLANRAIPA 148
Query: 188 --------LTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
LTL + INLA+ + + H++ H+GG ++GFLLG + FG A Q
Sbjct: 149 INYLGKQALTLAI---INLALDLFVSHINILGHLGGLISGFLLGII------FGSAHLRQ 199
Query: 239 LPAQARV 245
+ RV
Sbjct: 200 YHHKLRV 206
>gi|225026638|ref|ZP_03715830.1| hypothetical protein EUBHAL_00889 [Eubacterium hallii DSM 3353]
gi|224956008|gb|EEG37217.1| peptidase, S54 family [Eubacterium hallii DSM 3353]
Length = 343
Score = 60.8 bits (146), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 76/154 (49%), Gaps = 32/154 (20%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA++W VV +HQ +RL T ++LH G HLL NML L+ IG RLE+ G + +Y+ +
Sbjct: 185 GAIDWMDVVEKHQYYRLFTSMFLHFGADHLLQNMLILLVIGCRLERITGKLSYLLIYIGA 244
Query: 163 GFGGA-YYLLFLF----NAVS-------------LLVLLAAALLT-------------LV 191
G GA ++F N VS LL + + ++ ++
Sbjct: 245 GLIGAGTSIIFTLGNNPNTVSAGASGAIFGVMGGLLYCIISDIIQKKRHRVEEIGLTGMI 304
Query: 192 VIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFV 224
++A L+ G +DN AHIGG + GFL+ +
Sbjct: 305 FMVASALSYGFFSTGIDNAAHIGGLVGGFLITMI 338
>gi|300742642|ref|ZP_07072663.1| rhomboid family protein [Rothia dentocariosa M567]
gi|300381827|gb|EFJ78389.1| rhomboid family protein [Rothia dentocariosa M567]
Length = 261
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 73/138 (52%), Gaps = 23/138 (16%)
Query: 104 ALEWDRVVHEHQGWRLITCIWLHA--GVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
AL+WD + +R++T +LH+ H++ NMLSL GI LEQ G+ R VYLL
Sbjct: 103 ALKWDYTEFTGEYYRVLTSGFLHSQNDYSHIVMNMLSLYIFGIALEQMMGWWRYLLVYLL 162
Query: 162 SGFGGAYYLLFLFNAVSLLV--------LLAAALLTLVVI------------IAINLAVG 201
S GG++ +L L + + +V L+ A L+ +V++ IA+N+A G
Sbjct: 163 SIVGGSFGVLLLDDPTAEVVGASGGIFGLIGAYLVIMVILRERDNIRALMIMIAVNVAFG 222
Query: 202 IL-PHVDNFAHIGGFMAG 218
L P + AH GGF+ G
Sbjct: 223 FLVPGISWQAHAGGFVVG 240
>gi|262200065|ref|YP_003271273.1| rhomboid family protein [Gordonia bronchialis DSM 43247]
gi|262083412|gb|ACY19380.1| Rhomboid family protein [Gordonia bronchialis DSM 43247]
Length = 303
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 65/214 (30%), Positives = 99/214 (46%), Gaps = 27/214 (12%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIR 145
+ E + P ++ L G+L +V E + WRL+T +LH V+H+ NM+SL IG
Sbjct: 95 VAEAGITNPGNAALMSDGSL-VKGIVGEGEYWRLLTAGFLHFSVMHVAVNMISLYIIGRD 153
Query: 146 LEQQFGFVRVGFVYLLSGFGG-AYYLLF----------------LFNAVSLLVLLAAALL 188
LE+ G R VYL+S GG A +LF L A+ ++VL A
Sbjct: 154 LERALGTYRYLAVYLISLLGGSAAVMLFEADNVQTAGASGAIYGLIGAMLVIVLKARVPA 213
Query: 189 TLV-VIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVK 246
T V VII N+ + + LP + AH+GG G ++ P LP +AR+
Sbjct: 214 TPVLVIIGFNVVLSVSLPGISLMAHLGGLAFGVAATAAIVYLPGL------VLP-RARLD 266
Query: 247 SRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGEN 280
+ +V L+++ +G VG ML+ G
Sbjct: 267 AASANRVAWAALVTLLVVALGLGVGAGMLYDGPT 300
>gi|407045142|gb|EKE43034.1| peptidase S54 (rhomboid) family protein, partial [Entamoeba
nuttalli P19]
Length = 330
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/171 (30%), Positives = 80/171 (46%), Gaps = 28/171 (16%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
FE N + GP+S + LGA + +Q WRLIT I+LH G+IHLL N+ + +
Sbjct: 114 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 173
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL----VVIIAINL 198
G+ +E+++ R VY +SG G + + + S+ V + +LL + VV I IN
Sbjct: 174 GMIIERRWNSFRFLIVYFVSGIIGNCFSI-ICQPTSIGVGASGSLLGIFGGFVVDIIINK 232
Query: 199 A----------VGIL-------------PHVDNFAHIGGFMAGFLLGFVLL 226
+G L P +D AH+ GFM G + F L
Sbjct: 233 NKFENRVWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFMGGAICAFGLF 283
>gi|168214465|ref|ZP_02640090.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|168216839|ref|ZP_02642464.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|422346116|ref|ZP_16427030.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
gi|170714094|gb|EDT26276.1| rhomboid family protein [Clostridium perfringens CPE str. F4969]
gi|182381088|gb|EDT78567.1| rhomboid family protein [Clostridium perfringens NCTC 8239]
gi|373226738|gb|EHP49060.1| hypothetical protein HMPREF9476_01103 [Clostridium perfringens
WAL-14572]
Length = 342
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 80/144 (55%), Gaps = 24/144 (16%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+GA + ++ + +RL+T ++LH G++HLL NM +L +G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 162 SGFGGAYYLLFLFNAV-------SLLVLLAAALL---------------TLVVIIAINLA 199
SG + + L+ F+ V ++ LL AAL+ ++VII +N+
Sbjct: 249 SGIVASIFSLY-FSPVMGVGASGAIFGLLGAALVFAYNEKDRIGKALVTNIIVIILLNVF 307
Query: 200 VGI-LPHVDNFAHIGGFMAGFLLG 222
+G+ + ++D AH GGF+AG +LG
Sbjct: 308 IGLSMSNIDISAHFGGFIAGAILG 331
>gi|110799144|ref|YP_696141.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|168206356|ref|ZP_02632361.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
gi|169347261|ref|ZP_02866200.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|110673791|gb|ABG82778.1| rhomboid family protein [Clostridium perfringens ATCC 13124]
gi|169296657|gb|EDS78788.1| rhomboid family protein [Clostridium perfringens C str. JGS1495]
gi|170662212|gb|EDT14895.1| rhomboid family protein [Clostridium perfringens E str. JGS1987]
Length = 342
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 80/144 (55%), Gaps = 24/144 (16%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+GA + ++ + +RL+T ++LH G++HLL NM +L +G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 162 SGFGGAYYLLFLFNAV-------SLLVLLAAALL---------------TLVVIIAINLA 199
SG + + L+ F+ V ++ LL AAL+ ++VII +N+
Sbjct: 249 SGIVASIFSLY-FSPVMGVGASGAIFGLLGAALVFAYNEKDRIGKALVTNIIVIILLNVF 307
Query: 200 VGI-LPHVDNFAHIGGFMAGFLLG 222
+G+ + ++D AH GGF+AG +LG
Sbjct: 308 IGLSMSNIDISAHFGGFIAGAILG 331
>gi|408530693|emb|CCK28867.1| integral membrane protein [Streptomyces davawensis JCM 4913]
Length = 296
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 78/149 (52%), Gaps = 24/149 (16%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA--Y 168
V E Q +RL+T ++LH VIHLL NMLSL ++G LE G R +Y +SG G+
Sbjct: 127 VAEGQSYRLLTSMFLHGSVIHLLFNMLSLWWLGGPLEAALGRARYLALYFVSGLAGSALA 186
Query: 169 YLLF---------------LFNAVSLLV-LLAAALLTLVVIIAINLAVGILP--HVDNFA 210
YLL LF A ++L+ L + ++ ++AINL P ++ A
Sbjct: 187 YLLAEPNTATLGASGAIFGLFGATAVLMRRLNYDMRPIIALLAINLIFTFSPGFNISWQA 246
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQL 239
HIGG +AG ++G+ ++ P+ ER L
Sbjct: 247 HIGGLVAGVVIGYGMVHAPR----ERRAL 271
>gi|386087436|ref|YP_006003310.1| hypothetical protein [Streptococcus thermophilus ND03]
gi|312279149|gb|ADQ63806.1| Conserved hypothetical, predicted membrane protein (TMS6)
[Streptococcus thermophilus ND03]
Length = 224
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 66/205 (32%), Positives = 97/205 (47%), Gaps = 36/205 (17%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEH-QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
N S +L K+GA+ V + + WRLIT I++H GV H L NML+L F+G E
Sbjct: 30 NSFQATSPLSLFKMGAMFGTFVQYNPLELWRLITPIFVHIGVEHFLFNMLTLYFMGRMAE 89
Query: 148 QQFGFVRVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL------------ 188
Q FG +R +YLL+G G A+ LLF N + SL L AA ++
Sbjct: 90 QIFGTLRFLGLYLLAGVMGNAFTLLFTPNVIAAGASTSLFGLFAAIVIIGYYSHSPLLNQ 149
Query: 189 ---TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+ +I INL + P V H+GG + G L L A + ++R
Sbjct: 150 LGRNYLALIVINLIFNLFTPSVGITGHLGGLVGGALAAIFL--------ANK----VESR 197
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFT 269
+ S+ + L V L+L+++GFT
Sbjct: 198 LFSKGWRFTSFLTYVILLLIVLGFT 222
>gi|315038824|ref|YP_004032392.1| hypothetical protein LA2_08440 [Lactobacillus amylovorus GRL 1112]
gi|325957263|ref|YP_004292675.1| hypothetical protein LAC30SC_08175 [Lactobacillus acidophilus 30SC]
gi|385818055|ref|YP_005854445.1| hypothetical protein LAB52_07605 [Lactobacillus amylovorus GRL1118]
gi|312276957|gb|ADQ59597.1| hypothetical protein LA2_08440 [Lactobacillus amylovorus GRL 1112]
gi|325333828|gb|ADZ07736.1| hypothetical protein LAC30SC_08175 [Lactobacillus acidophilus 30SC]
gi|327183993|gb|AEA32440.1| hypothetical protein LAB52_07605 [Lactobacillus amylovorus GRL1118]
Length = 226
Score = 60.8 bits (146), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 91/198 (45%), Gaps = 41/198 (20%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
+++ L K+GA+ VV +Q WRL T +LH GV+HL++N + + ++G +E G
Sbjct: 34 ENTNVLMKMGAMSNYAVVVGNQWWRLFTAQFLHIGVMHLVSNAVIIYYMGQYIEPIMGHA 93
Query: 154 RVGFVYLLSGFGG-----------------AYYLLFLFNAVSLLVL--LAAALLTLV--- 191
R YLL+G GG + L LF A++ + L + +++ +
Sbjct: 94 RFLVTYLLAGIGGNLMSLAFSSDRGLSAGASTALFGLFGAMTAIGLRNIHNPMISFLGRQ 153
Query: 192 --VIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSR 248
V+ INL + I P +D + H+GG + GFLL +L RV
Sbjct: 154 AFVLALINLGIDIFAPGIDIWGHLGGLIVGFLLAVIL----------------GDRVMKT 197
Query: 249 HNPYQYVLCIVALVLLIV 266
+NP VL L+ IV
Sbjct: 198 YNPKWRVLAGAVLIFYIV 215
>gi|418476663|ref|ZP_13045815.1| hypothetical protein SMCF_8893 [Streptomyces coelicoflavus ZG0656]
gi|371542672|gb|EHN71698.1| hypothetical protein SMCF_8893 [Streptomyces coelicoflavus ZG0656]
Length = 297
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 57/179 (31%), Positives = 86/179 (48%), Gaps = 36/179 (20%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA--Y 168
V E Q +RL+T ++LH G +H+L NMLSL ++G LE G R +Y SG G+
Sbjct: 129 VAEGQWYRLLTAMFLHTGYMHILFNMLSLWWLGGPLEGALGRARYLALYFCSGLAGSALT 188
Query: 169 YLLF---------------LFNAVSLLV-LLAAALLTLVVIIAINLAVGIL-PHVDNFAH 211
YL+ LF A + LV L A + +V+++AINL ++ AH
Sbjct: 189 YLIAEPNQPSLGASGAIFGLFGATATLVRRLNADMRPVVILLAINLVFTFTWANIAWQAH 248
Query: 212 IGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
+GG +AG ++G+ +L P + R QY C + LV +VG T+
Sbjct: 249 VGGLVAGAVIGYAMLHAP----------------RQRRTLVQYGTCALVLV-AVVGLTL 290
>gi|422874373|ref|ZP_16920858.1| rhomboid family protein [Clostridium perfringens F262]
gi|380304681|gb|EIA16968.1| rhomboid family protein [Clostridium perfringens F262]
Length = 342
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 80/144 (55%), Gaps = 24/144 (16%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+GA + ++ + +RL+T ++LH G++HLL NM +L +G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 162 SGFGGAYYLLFLFNAV-------SLLVLLAAALL---------------TLVVIIAINLA 199
SG + + L+ F+ V ++ LL AAL+ ++VII +N+
Sbjct: 249 SGIVASIFSLY-FSPVMGVGASGAIFGLLGAALVFAYNEKDRIGKALVTNIIVIILLNVF 307
Query: 200 VGI-LPHVDNFAHIGGFMAGFLLG 222
+G+ + ++D AH GGF+AG +LG
Sbjct: 308 IGLSMSNIDISAHFGGFIAGAILG 331
>gi|299538296|ref|ZP_07051581.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|424736343|ref|ZP_18164803.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
gi|298726498|gb|EFI67088.1| hypothetical protein BFZC1_19855 [Lysinibacillus fusiformis ZC1]
gi|422949946|gb|EKU44319.1| hypothetical protein C518_0957 [Lysinibacillus fusiformis ZB2]
Length = 207
Score = 60.8 bits (146), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 77/161 (47%), Gaps = 33/161 (20%)
Query: 97 STLQKLGALEWDR------VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
S + +G L W+ ++ + WR+ + I+LHAG +H+ NM SL G LE+
Sbjct: 32 SLIPSIGTLLWNYGIQANFLIQSGEWWRVFSAIFLHAGFMHVFFNMFSLYLFGPELEKIA 91
Query: 151 GFVRVGFVYLLSGFGG--AYYLLF---------------LFNAVSLLV--------LLAA 185
G R +YL+SG G A Y+ + +F A LV +L
Sbjct: 92 GKARFITIYLVSGIVGNMATYIFYDSSYASLGASGAIFGIFGAFGALVYYTRRTMPMLRK 151
Query: 186 ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLL 226
+L ++VI I + P+V+ FAH+GG + GF+LG V L
Sbjct: 152 LILPIIVISVI--MTFLQPNVNVFAHLGGLVTGFILGLVYL 190
>gi|340502629|gb|EGR29302.1| rhomboid family protein, putative [Ichthyophthirius multifiliis]
Length = 255
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 50/190 (26%), Positives = 80/190 (42%), Gaps = 39/190 (20%)
Query: 87 KENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
+E+ L L K GA + +E+Q WR +T +LHA +H+ NM+S L
Sbjct: 61 EESKLLEQDQQVLIKYGANVPSLIKNENQLWRFVTAAFLHANFLHIFFNMISTFIFVSSL 120
Query: 147 EQQFGFVRVGFVYLLSGFGGAY----------------------------YLLFLFNAVS 178
E +GF V ++++LS GG YL+ +NA+
Sbjct: 121 EHTYGFFTVFYIWILSAIGGNIFSADFATQNSIAVGASTALFGMIGLYLAYLILNWNALR 180
Query: 179 LL------VLLAAALLTLVVIIAINLAVGIL-----PHVDNFAHIGGFMAGFLLGFVLLL 227
L VL A L+ +V + + GI+ ++DN+ H GGF+ G L G
Sbjct: 181 FLEDLRCFVLCMAILIVSMVFLLSSGNSGIMGGEKEQNIDNYGHFGGFITGILAGVAFPK 240
Query: 228 RPQFGWAERH 237
++G E+
Sbjct: 241 SLEYGSYEKQ 250
>gi|225572886|ref|ZP_03781641.1| hypothetical protein RUMHYD_01077 [Blautia hydrogenotrophica DSM
10507]
gi|225039751|gb|EEG49997.1| peptidase, S54 family [Blautia hydrogenotrophica DSM 10507]
Length = 222
Score = 60.5 bits (145), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 33/179 (18%)
Query: 90 PLFGPSSST--LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
L G S +T + + GA +V + +RL T ++LH G+ HL NML L IG LE
Sbjct: 44 DLSGNSGNTEHMLRCGAANAALIVEAKEYYRLFTSMFLHFGMAHLANNMLVLYVIGDNLE 103
Query: 148 QQFGFVRVGFVYLLSGFGG---AYYLLFLFNAVS----------------LLVLLAA--- 185
+ G V+ +YL SG GG + YL + A+S L VLLA
Sbjct: 104 RAVGKVKYLLIYLFSGLGGNILSCYLEYQEGALSVSAGASGAIFGVMGAMLYVLLANHGR 163
Query: 186 ----ALLTLVVIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQ----FGWAE 235
+V++ +L G VDN AH+GG + GFL+ +L R + WAE
Sbjct: 164 LEDLTARQIVIMAGFSLYFGFTSSGVDNAAHVGGLICGFLVAMLLYHRKRNIVMKSWAE 222
>gi|443731516|gb|ELU16621.1| hypothetical protein CAPTEDRAFT_101212 [Capitella teleta]
Length = 466
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 95/211 (45%), Gaps = 40/211 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL +++HAG+ L+ ++L F+ LE+ G++R+ +YL SG G A +L
Sbjct: 258 QFYRLWLSLFVHAGLFQLIISVLFQFFMMRDLEKLAGWLRIAIIYLGSGVAGSLSSAIFL 317
Query: 171 LFLFNA------VSLLVLLAAALLTLVVIIA--------------INLAVGILPHVDNFA 210
+ A LL L +L I+A + VG+LP +DN+A
Sbjct: 318 PYHVEAGPAGAQFGLLACLVVEILHNWYILASPWWAMGKLIVIIIVLFIVGLLPFIDNYA 377
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ G + GFLL F LL F +R ++ IV +++ G
Sbjct: 378 HLIGLVFGFLLSFSLLPYVNFNTLDRR---------------SKIIGIVLSLIVSAGLFA 422
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
L++LF + C +CHY +C+P + C
Sbjct: 423 LLIVLFYVTPVYN-CPYCHYFNCIPFTDKFC 452
>gi|385259605|ref|ZP_10037774.1| peptidase, S54 family [Streptococcus sp. SK140]
gi|385193633|gb|EIF40991.1| peptidase, S54 family [Streptococcus sp. SK140]
Length = 224
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 95 SSSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S++TL K GA+ + Q WRL + ++H G+ H L NMLSL F+G ++EQ FG
Sbjct: 36 SAATLYKFGAVYPPAIKAMPEQIWRLFSATFVHIGLEHFLVNMLSLYFLGRQMEQIFGSK 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAVS 178
+ F+YLLSG G + L+F NA++
Sbjct: 96 QFFFIYLLSGMMGNLFVLVFSPNAIT 121
>gi|322388635|ref|ZP_08062235.1| S54 family peptidase [Streptococcus infantis ATCC 700779]
gi|419843677|ref|ZP_14366985.1| peptidase, S54 family [Streptococcus infantis ATCC 700779]
gi|321140555|gb|EFX36060.1| S54 family peptidase [Streptococcus infantis ATCC 700779]
gi|385702574|gb|EIG39716.1| peptidase, S54 family [Streptococcus infantis ATCC 700779]
Length = 224
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 2/86 (2%)
Query: 95 SSSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S++TL K GA+ + Q WRL + ++H G+ H L NMLSL F+G ++EQ FG
Sbjct: 36 SAATLYKFGAVYPPAIKAMPEQIWRLFSATFVHIGLQHFLVNMLSLYFLGRQMEQIFGSK 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAVS 178
+ F+YLLSG G + L+F NA++
Sbjct: 96 QFFFIYLLSGMMGNLFVLVFSPNAIT 121
>gi|258650339|ref|YP_003199495.1| rhomboid family protein [Nakamurella multipartita DSM 44233]
gi|258553564|gb|ACV76506.1| Rhomboid family protein [Nakamurella multipartita DSM 44233]
Length = 292
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 73/139 (52%), Gaps = 19/139 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + WRL+T +LH ++HL NMLSL ++GI LE+ G R+ +YL+S G + +
Sbjct: 106 VASGEYWRLLTSGFLHGNLVHLATNMLSLYWLGIPLERILGRGRMLTIYLISLLGASVSV 165
Query: 171 LFLFNAVSLLV--------LLAAALLTL----------VVIIAINLAVGI-LPHVDNFAH 211
L VSL + L+ A L T VVI+A+N+ + P + H
Sbjct: 166 LLFSAPVSLTIGASGAVYGLMGALLATFRRLRLDLRPLVVILALNVFITFSYPGLSWQGH 225
Query: 212 IGGFMAGFLLGFVLLLRPQ 230
+GGF+AG ++G ++ P+
Sbjct: 226 LGGFVAGAIVGAAMVFPPR 244
>gi|152993649|ref|YP_001359370.1| hypothetical protein SUN_2072 [Sulfurovum sp. NBC37-1]
gi|151425510|dbj|BAF73013.1| conserved hypothetical protein [Sulfurovum sp. NBC37-1]
Length = 192
Score = 60.5 bits (145), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 75/159 (47%), Gaps = 26/159 (16%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L +GAL V + + WRL T ++LH G+ H+L NM+SL IG +E F +
Sbjct: 6 LVDMGALYGPLTVLKGEWWRLFTAMFLHGGMTHILMNMVSLYIIGRGMEMYFDTKSYLSI 65
Query: 159 YLLSGFGGAYYLLFL----------------FNAVSLLVL---------LAAALLTLVVI 193
YL SG G L++ F A++ + A + VI
Sbjct: 66 YLFSGLLGGLVSLYIHPASVGIGASGAIFGVFGALAGFFIAHRKHLGKHTKAFMKEFTVI 125
Query: 194 IAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
I INL +G +P+VD AH+ G + GF+ G++L P+F
Sbjct: 126 IVINLVIGFSIPNVDVSAHVAGTVVGFIGGYLLSKDPKF 164
>gi|440913469|gb|ELR62919.1| Rhomboid family member 1 [Bos grunniens mutus]
Length = 861
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 92/218 (42%), Gaps = 48/218 (22%)
Query: 115 QGWRLITCIWLHAG-------VIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG- 166
Q +RL ++LHAG V+H L ++ + + LE+ G+ R+ +YLLSG G
Sbjct: 651 QFYRLWLSLFLHAGQVTPRGLVLHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGN 710
Query: 167 ---AYYLLF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGIL 203
A +L + LF + +L A L+ ++ G+L
Sbjct: 711 LASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLL 770
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVL 263
P +DNFAHI GF++G L F L FG + ++ Q + + LV
Sbjct: 771 PWIDNFAHISGFISGLFLSFAFLPYISFGKFDLYRKRCQ-------------IIVFQLVF 817
Query: 264 LIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
L + + ++ F C WC +L+C+P + C
Sbjct: 818 LGLLAGLVVLFYFYPVR----CEWCEFLTCIPFTDKFC 851
>gi|323340676|ref|ZP_08080928.1| rhomboid protease GluP [Lactobacillus ruminis ATCC 25644]
gi|335996819|ref|ZP_08562736.1| rhomboid family integral membrane protein [Lactobacillus ruminis
SPM0211]
gi|417974323|ref|ZP_12615144.1| rhomboid family integral membrane protein [Lactobacillus ruminis
ATCC 25644]
gi|323091799|gb|EFZ34419.1| rhomboid protease GluP [Lactobacillus ruminis ATCC 25644]
gi|335351889|gb|EGM53380.1| rhomboid family integral membrane protein [Lactobacillus ruminis
SPM0211]
gi|346329320|gb|EGX97618.1| rhomboid family integral membrane protein [Lactobacillus ruminis
ATCC 25644]
Length = 219
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 90/204 (44%), Gaps = 42/204 (20%)
Query: 81 LSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLV 140
++F +NP L + GA + V + WRL+T ++LH G+ HL NML+L
Sbjct: 25 MTFAGGSQNP------GVLVRFGA-NFAPYVSNGEYWRLLTAMFLHIGLEHLALNMLTLY 77
Query: 141 FIGIRLEQQFGFVRVGFVYLLSGF---------------GGAYYLLFLFNAVSLL----- 180
FIG LE G VR +YL+SG G + L LF A +L
Sbjct: 78 FIGASLEPILGSVRFAVLYLVSGICGDAASYSLTNGLSAGASTALFGLFGAYLMLGESFR 137
Query: 181 -----VLLAAALLTLVVIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQFGWA 234
++A L LVV +N+ +D + HIGG ++GFL G+V+ G
Sbjct: 138 NNAYIKMMARQFLLLVV---LNIFFDFFSSGIDIWGHIGGLLSGFLFGYVI------GVP 188
Query: 235 ERHQLPAQARVKSRHNPYQYVLCI 258
+ ++P RV ++L I
Sbjct: 189 KLGEIPVGKRVICAMAILMFLLVI 212
>gi|441518028|ref|ZP_20999756.1| hypothetical protein GOHSU_24_00060 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
gi|441455057|dbj|GAC57717.1| hypothetical protein GOHSU_24_00060 [Gordonia hirsuta DSM 44140 =
NBRC 16056]
Length = 244
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 57/188 (30%), Positives = 91/188 (48%), Gaps = 28/188 (14%)
Query: 96 SSTLQKLGALEWDR-VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+S++ GAL +R +V E+ WRL+T +LH+ V HL NM+SL +G LE+ FG R
Sbjct: 51 ASSIMNDGALYSNRHLVFEY--WRLLTSGFLHSSVPHLALNMISLYIVGRELERLFGPAR 108
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAAL------------------LTLVVIIAI 196
+YL+S FGG+ +L + V + A+ +++V+I +
Sbjct: 109 YLTIYLMSLFGGSAAVLLFQQGPAPTVGASGAIYGLMGALLVVVLRLKLPATSVLVVIGL 168
Query: 197 NLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYV 255
N+ + I +P + +AH+GG G L +L W LP R +R + +
Sbjct: 169 NIVMSISIPGISLWAHLGGLAFGALGALAVL------WLPIVVLPPDQRTAARVSRTGWA 222
Query: 256 LCIVALVL 263
IV LVL
Sbjct: 223 GLIVLLVL 230
>gi|55821808|ref|YP_140250.1| hypothetical protein stu1836 [Streptococcus thermophilus LMG 18311]
gi|55737793|gb|AAV61435.1| Conserved hypothetical, predicted membrane protein (TMS6)
[Streptococcus thermophilus LMG 18311]
Length = 224
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEH-QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
N S +L K+GA+ V + + WRLIT I++H GV H L NML+L F+G E
Sbjct: 30 NSFQATSPLSLFKMGAMFGTFVQYNPLELWRLITPIFVHIGVEHFLFNMLTLYFMGRMAE 89
Query: 148 QQFGFVRVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL------------ 188
Q FG +R +YLL+G G A+ L F N + SL L AA ++
Sbjct: 90 QIFGTLRFLGLYLLAGVMGNAFTLFFTPNVIAAGASTSLFGLFAAIVILGYYSHSPLLNQ 149
Query: 189 ---TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+ +I INL + P V H+GG + G L L A + ++R
Sbjct: 150 LGRNYLALIVINLIFNLFTPSVGITGHLGGLVGGALAAIFL--------ANK----VESR 197
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFT 269
+ S+ + L V L+L+++GFT
Sbjct: 198 LFSKGWRFTSFLTYVTLLLIVLGFT 222
>gi|333395939|ref|ZP_08477756.1| membrane-associated serine protease [Lactobacillus coryniformis
subsp. coryniformis KCTC 3167]
gi|420145094|ref|ZP_14652570.1| Membrane-associated serine protease [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
gi|398403329|gb|EJN56584.1| Membrane-associated serine protease [Lactobacillus coryniformis
subsp. coryniformis CECT 5711]
Length = 223
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 26/157 (16%)
Query: 90 PLFGPS--SSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
LFG S S+ L GA + + ++ + Q WRLI I+LH+G++H+ N ++L FIG+++E
Sbjct: 30 TLFGGSQNSNVLVFFGA-KVNILIQQGQWWRLIMPIFLHSGLMHIAVNSVTLYFIGMQIE 88
Query: 148 QQFGFVRVGFVYLLSGF---------------GGAYYLLFLFNAVSLLV-------LLAA 185
FG R +YLLSG G + L LF A +LV + A
Sbjct: 89 SLFGHWRFTLIYLLSGIVGNIASFVFNMGISVGASTALFGLFGAFFMLVEAFRQNTAIRA 148
Query: 186 ALLTLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLL 221
+ I +NLA + P +D H+GG + GFL+
Sbjct: 149 MGQQFALFIVLNLAFDLFNPGIDLAGHVGGLLGGFLV 185
>gi|74786304|sp|Q695T8.1|RHBL4_TOXGO RecName: Full=Rhomboid-like protease 4
gi|47500379|gb|AAT29067.1| rhomboid-like protease 4 [Toxoplasma gondii]
Length = 641
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 23/154 (14%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P++ L+ LG LE + + + +RL T +++H G +H+L N+ + I +E +GF+
Sbjct: 320 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 379
Query: 154 RVGFVYLLSGFGGAYY-------LLFLFNAVSLLVLLAA----------------ALLTL 190
R ++ L G G + + ++ S+ LL A +L
Sbjct: 380 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 439
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
++++ I + G+ DN+AH+GG + G L GF
Sbjct: 440 MIVVIIGILTGMAGFTDNYAHMGGALGGILWGFA 473
>gi|449710524|gb|EMD49581.1| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
KU27]
Length = 334
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 28/171 (16%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
FE N + GP+S + LGA + +Q WRLIT I+LH G+IHLL N+ + +
Sbjct: 118 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 177
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL----VVIIAINL 198
G+ +E+++ R VY +SG G + + + S+ V + +LL + VV I IN
Sbjct: 178 GMIIERRWNSFRFLIVYFVSGIIGNCFSI-ICQPTSIGVGASGSLLGIFGGFVVDIIINK 236
Query: 199 A----------VGIL-------------PHVDNFAHIGGFMAGFLLGFVLL 226
+G L P +D AH+ GF+ G + F L
Sbjct: 237 KKFENRVWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFIGGAICAFGLF 287
>gi|14336678|gb|AAK61212.1|AE006462_4 unknown [Homo sapiens]
gi|119606279|gb|EAW85873.1| rhomboid 5 homolog 1 (Drosophila), isoform CRA_a [Homo sapiens]
Length = 862
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 48/218 (22%)
Query: 115 QGWRLITCIWLHAGVIHLLANML-SLVFIGIR------LEQQFGFVRVGFVYLLSGFGG- 166
Q +RL ++LHAG + L A +L LV I + LE+ G+ R+ +YLLSG G
Sbjct: 652 QFYRLWLSLFLHAGQVTLWAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGN 711
Query: 167 ---AYYLLF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGIL 203
A +L + LF + +L A L+ ++ G+L
Sbjct: 712 LASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLL 771
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVL 263
P +DNFAHI GF++G L F L FG + ++ Q + +Q V + L
Sbjct: 772 PWIDNFAHISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII------FQVVFLGLLAGL 825
Query: 264 LIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+++ + + C WC +L+C+P + C
Sbjct: 826 VVLFYVYPV-----------RCEWCEFLTCIPFTDKFC 852
>gi|237832509|ref|XP_002365552.1| rhomboid-like protease 4 [Toxoplasma gondii ME49]
gi|211963216|gb|EEA98411.1| rhomboid-like protease 4 [Toxoplasma gondii ME49]
Length = 664
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 39/154 (25%), Positives = 73/154 (47%), Gaps = 23/154 (14%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P++ L+ LG LE + + + +RL T +++H G +H+L N+ + I +E +GF+
Sbjct: 343 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 402
Query: 154 RVGFVYLLSGFGGAYY-------LLFLFNAVSLLVLLAA----------------ALLTL 190
R ++ L G G + + ++ S+ LL A +L
Sbjct: 403 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 462
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
++++ I + G+ DN+AH+GG + G L GF
Sbjct: 463 MIVVIIGILTGMAGFTDNYAHMGGALGGILWGFA 496
>gi|340724954|ref|XP_003400842.1| PREDICTED: hypothetical protein LOC100644578 [Bombus terrestris]
Length = 1834
Score = 60.1 bits (144), Expect = 1e-06, Method: Composition-based stats.
Identities = 56/213 (26%), Positives = 94/213 (44%), Gaps = 40/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AYYLLF 172
Q +RL T ++LHAGV+HL ++ F+ LE+ G +R+ +Y + G A +
Sbjct: 1627 QFYRLFTTMFLHAGVLHLSITLMVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 1686
Query: 173 LFNA-VSLLVLLAAALLTLVVII---------------------AINLAVGILPHVDNFA 210
+ A V A L TL+V + L +G+LP VDN+A
Sbjct: 1687 PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRVLSKLIFVLLGLLILGMLPWVDNYA 1746
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ GF+ GFL + L+ FG +R + + L + L+L++V FT+
Sbjct: 1747 HLFGFIFGFLAAYALMPFISFGHYDRRR--------------KIWLIWICLILIVVLFTL 1792
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L + + C C +C+P ++ C +
Sbjct: 1793 LLALFYNVPVY--ECEVCKLFNCIPFTRDFCAS 1823
>gi|55823724|ref|YP_142165.1| hypothetical protein str1836 [Streptococcus thermophilus CNRZ1066]
gi|55739709|gb|AAV63350.1| conserved hypothetical protein [Streptococcus thermophilus
CNRZ1066]
Length = 224
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 65/205 (31%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEH-QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
N S +L K+GA+ V + + WRLIT I++H GV H L NML+L F+G E
Sbjct: 30 NSFQATSPLSLFKMGAMFGTFVQYNPLELWRLITPIFVHIGVEHFLFNMLTLYFMGRMAE 89
Query: 148 QQFGFVRVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL------------ 188
Q FG +R +YLL+G G A+ L F N + SL L AA ++
Sbjct: 90 QIFGTLRFLGLYLLAGVMGNAFTLFFTPNVIAAGASTSLFGLFAAIVILGYYSHSPLLNQ 149
Query: 189 ---TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+ +I INL + P V H+GG + G L L A + ++R
Sbjct: 150 LGRNYLALIVINLIFNLFTPSVGITGHLGGLVGGALAAIFL--------ANK----VESR 197
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFT 269
+ S+ + L V L+L+++GFT
Sbjct: 198 LFSKGWRFTSFLTYVKLLLIVLGFT 222
>gi|309803097|ref|ZP_07697194.1| peptidase, S54 family [Lactobacillus iners LactinV 11V1-d]
gi|309806110|ref|ZP_07700129.1| peptidase, S54 family [Lactobacillus iners LactinV 03V1-b]
gi|329920170|ref|ZP_08277001.1| peptidase, S54 family [Lactobacillus iners SPIN 1401G]
gi|349611504|ref|ZP_08890739.1| hypothetical protein HMPREF1027_00166 [Lactobacillus sp. 7_1_47FAA]
gi|308164605|gb|EFO66855.1| peptidase, S54 family [Lactobacillus iners LactinV 11V1-d]
gi|308167465|gb|EFO69625.1| peptidase, S54 family [Lactobacillus iners LactinV 03V1-b]
gi|328936624|gb|EGG33068.1| peptidase, S54 family [Lactobacillus iners SPIN 1401G]
gi|348608597|gb|EGY58577.1| hypothetical protein HMPREF1027_00166 [Lactobacillus sp. 7_1_47FAA]
Length = 232
Score = 60.1 bits (144), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 49/216 (22%)
Query: 90 PLFGPSSSTLQKL---GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
LF ++ + KL G + VV + Q WRL T ++HAG H++ N++ + F G+ L
Sbjct: 33 ELFFDVNNDINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFL 92
Query: 147 EQQFGFVRVGFVYLLSGFGG---------------------------AYYLLFLFNAVSL 179
EQ G +R +YLLSG GG L FL N +
Sbjct: 93 EQFLGHIRYLTIYLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNII 152
Query: 180 LVLLA-AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
V++ A L L+ I ++ +P VD HIGG + GFLL +L G
Sbjct: 153 AVIIGRQAFLLLICNIVVDF---FMPSVDIIGHIGGTITGFLLTIIL------GSIFFKD 203
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVM 274
P++ RV + C++ ++ L+ G+V+
Sbjct: 204 APSKIRV---------LFCVIFIIYLVYCLRQGMVI 230
>gi|167387754|ref|XP_001738294.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898583|gb|EDR25416.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 334
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 81/171 (47%), Gaps = 28/171 (16%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
FE N + GP+S + LGA + +Q WRLIT I+LH G+IHL+ N+ + +
Sbjct: 118 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLICNLTMQLRL 177
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL----VVIIAINL 198
G+ +E+++ R VY +SG G + + + S+ V + +LL + V+ I IN
Sbjct: 178 GMIIERRWNSFRFLVVYFVSGIIGNCFSI-ICQPTSIGVGASGSLLGIFGGFVIDIIINK 236
Query: 199 A----------VGIL-------------PHVDNFAHIGGFMAGFLLGFVLL 226
+G L P +D AHI GF+ G + F LL
Sbjct: 237 NKFENRVWLNLIGRLMISIIIIFVFSFAPGIDYSAHIFGFIGGAICAFGLL 287
>gi|390961805|ref|YP_006425639.1| integral membrane protein rhomboid-like protein [Thermococcus sp.
CL1]
gi|390520113|gb|AFL95845.1| integral membrane protein rhomboid-like protein [Thermococcus sp.
CL1]
Length = 203
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 23/158 (14%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGW-RLITCIWLHAGVIHLLANMLSLVFIGI 144
L NP F S L +LG +W+ V + W +L+T +++H G++H+ NM L+ +G
Sbjct: 31 LSGNP-FSISIDVLARLG--QWNYAVLSYGWWWQLVTAMFVHVGILHIGFNMYFLLMMGR 87
Query: 145 RLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLV-VIIAINLAVG-- 201
+LE G R+ VYL+SG G LFL A S+ + AL +V +I I VG
Sbjct: 88 QLEGIIGPKRLVMVYLVSGLAGNLLTLFLLPANSVSAGASGALFGIVGTLIIITGVVGGN 147
Query: 202 ----------------ILPHVDNFAHIGGFMAGFLLGF 223
I+P V+ +AH+GG + G +G+
Sbjct: 148 MQGALINAFVLFLINSIMPSVNVYAHLGGLLVGMAIGY 185
>gi|51860140|gb|AAU11320.1| rhomboid 4 [Toxoplasma gondii]
Length = 634
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P++ L+ LG LE + + + +RL T +++H G +H+L N+ + I +E +GF+
Sbjct: 312 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 371
Query: 154 RVGFVYLLSGFGGAYY-------LLFLFNAVSLLVLLAA-----------------ALLT 189
R ++ L G G + + ++ S+ LL A L+
Sbjct: 372 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 431
Query: 190 LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
++V++ I + G+ DN+AH+GG + G L GF
Sbjct: 432 MIVVVIIGILTGMAGFTDNYAHMGGALGGILWGFA 466
>gi|221508525|gb|EEE34094.1| rhomboid, putative [Toxoplasma gondii VEG]
Length = 634
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P++ L+ LG LE + + + +RL T +++H G +H+L N+ + I +E +GF+
Sbjct: 312 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 371
Query: 154 RVGFVYLLSGFGGAYY-------LLFLFNAVSLLVLLAA-----------------ALLT 189
R ++ L G G + + ++ S+ LL A L+
Sbjct: 372 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 431
Query: 190 LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
++V++ I + G+ DN+AH+GG + G L GF
Sbjct: 432 MIVVVIIGILTGMAGFTDNYAHMGGALGGILWGFA 466
>gi|156406677|ref|XP_001641171.1| predicted protein [Nematostella vectensis]
gi|156228309|gb|EDO49108.1| predicted protein [Nematostella vectensis]
Length = 456
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 96/211 (45%), Gaps = 53/211 (25%)
Query: 114 HQGWRLITCIWLHAGVIH-LLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF 172
HQ WR +T +++ GV+ ++ L L F LE++ G++R+ V++ +G GG + +
Sbjct: 263 HQWWRFLTTVYIPQGVVDGVIILSLELPF-SWTLERKLGWLRLLLVHMSAGAGG-HLMGS 320
Query: 173 LFNAVSLLVLLAAALLTLVVIIAINLA----------------------------VGILP 204
LF+ + +L +L I+A++L +G +P
Sbjct: 321 LFSKFT--SILTGGGPSLAGILAVHLVHHLEIWGLRPKLSKYTFCWTLSVLTLAFLGTIP 378
Query: 205 HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLL 264
H+ N A++ GF+ GFLL + + F W +R L L I+ LV+L
Sbjct: 379 HLSNHANVWGFVVGFLLAMIYI---PFQWVKRICL----------------LRIICLVIL 419
Query: 265 IVGFTVGLVMLFRGENGNDHCSWCHYLSCVP 295
I GF L M F ++ CS C Y+ CVP
Sbjct: 420 IFGFMCSL-MFFYEVQPSEPCSLCMYIDCVP 449
>gi|336176302|ref|YP_004581677.1| rhomboid family protein [Frankia symbiont of Datisca glomerata]
gi|334857282|gb|AEH07756.1| Rhomboid family protein [Frankia symbiont of Datisca glomerata]
Length = 377
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 73/137 (53%), Gaps = 20/137 (14%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR---------VG---FVYLLSGF 164
+RL+T +LHAGV+H+L NM +L +G +LEQ G R +G YL++G+
Sbjct: 207 YRLLTAAFLHAGVLHILFNMYALYLLGSQLEQILGRARYLALFVVCAIGGNTLSYLINGW 266
Query: 165 G----GAYYLLFLFNAVSLLVL--LAAALLTLVVIIAINLAVG-ILPHVDNFAHIGGFMA 217
GA +F F A ++ L A +++I+ INL + + +D + HIGG +A
Sbjct: 267 NTFSVGASTAVFGFFAAYYVIARRLRADTSAILIIVGINLIITFTIARIDKWGHIGGLVA 326
Query: 218 GFLLGFVLLLRP-QFGW 233
G ++G + P + GW
Sbjct: 327 GLVVGVIYAYVPARRGW 343
>gi|417937077|ref|ZP_12580383.1| peptidase, S54 family [Streptococcus infantis X]
gi|343399519|gb|EGV12041.1| peptidase, S54 family [Streptococcus infantis X]
Length = 230
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 30/161 (18%)
Query: 95 SSSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S++TL K GA+ + Q WRL + ++H G+ H L NMLSL F+G ++EQ FG
Sbjct: 42 SAATLYKFGAVYPPAIKAMPEQIWRLFSATFVHIGLQHFLVNMLSLYFLGRQMEQIFGSK 101
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV-------------SLLVL-----------LAAALL 188
+ F+YLLSG G + L+F +A+ S++VL L + L
Sbjct: 102 QFFFIYLLSGMMGNLFVLVFSPDAITAGASTALYGMFASIVVLRYASRNPYLQQLGQSYL 161
Query: 189 TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLR 228
+L+V INL +L P + H+GG + G LL V +R
Sbjct: 162 SLLV---INLVGSVLIPGISLAGHLGGAVGGALLAIVFPVR 199
>gi|221488003|gb|EEE26217.1| rhomboid-like protease 4 [Toxoplasma gondii GT1]
Length = 634
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 74/155 (47%), Gaps = 24/155 (15%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P++ L+ LG LE + + + +RL T +++H G +H+L N+ + I +E +GF+
Sbjct: 312 PNARVLRHLGGLETNYIREYSETFRLFTSMYMHGGWLHILINLSCQIQILWIIEPDWGFL 371
Query: 154 RVGFVYLLSGFGGAYY-------LLFLFNAVSLLVLLAA-----------------ALLT 189
R ++ L G G + + ++ S+ LL A L+
Sbjct: 372 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 431
Query: 190 LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
++V++ I + G+ DN+AH+GG + G L GF
Sbjct: 432 MIVVVIIGILTGMAGFTDNYAHMGGALGGILWGFA 466
>gi|90653004|gb|ABD95905.1| RHBDG1 [Homo sapiens]
Length = 862
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/218 (26%), Positives = 94/218 (43%), Gaps = 48/218 (22%)
Query: 115 QGWRLITCIWLHAGVIHLLANML-SLVFIGIR------LEQQFGFVRVGFVYLLSGFGG- 166
Q +RL ++LHAG + L A +L LV I + LE+ G+ R+ +YLLSG G
Sbjct: 652 QFYRLWLSLFLHAGQVTLWAGILHCLVSICFQMTVLRDLEKLAGWHRIAIIYLLSGVTGN 711
Query: 167 ---AYYLLF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGIL 203
A +L + LF + +L A L+ ++ G+L
Sbjct: 712 LASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLL 771
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVL 263
P +DNFAHI GF++G L F L FG + ++ Q + +Q V + L
Sbjct: 772 PWIDNFAHISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII------FQVVFLGLLAGL 825
Query: 264 LIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
+++ + + C WC +L+C+P + C
Sbjct: 826 VVLFYVYPV-----------RCEWCEFLTCIPFTDKFC 852
>gi|154420777|ref|XP_001583403.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121917644|gb|EAY22417.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 473
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 62/233 (26%), Positives = 108/233 (46%), Gaps = 43/233 (18%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGI- 144
++EN +GPS+ L ++GAL + +++ + WRL+ I L GV L + +V++G+
Sbjct: 223 IQENLYYGPSAKLLMRVGAL-YPPWIYDGEWWRLLVAISLQPGVAIL---AIDIVYMGLL 278
Query: 145 -RLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNA---------------VSLLVLLAA--- 185
+E+ GF ++LL G G ++ + SL L+A+
Sbjct: 279 YEIERYNGFWSALLIFLLCGLYGNVLSSYIISESVICGATGAICGWLGFSLTRLIASFHI 338
Query: 186 -----ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP 240
L+T + +I AVGILP+VDNF H+GGF+ G LL LL + +
Sbjct: 339 KKRVCYLITEIFMIIFIGAVGILPYVDNFQHVGGFVLGVLLSLALLPN-----NTKTKCA 393
Query: 241 AQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSC 293
A AR + +A ++I+ F+V + + + + C +C + C
Sbjct: 394 AIARG---------ITAFLAFPIMIIVFSVVVTFVIKNNLLDGKCKFCPKIQC 437
>gi|410728950|ref|ZP_11367038.1| putative membrane protein [Clostridium sp. Maddingley MBC34-26]
gi|410596504|gb|EKQ51173.1| putative membrane protein [Clostridium sp. Maddingley MBC34-26]
Length = 332
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 74/145 (51%), Gaps = 24/145 (16%)
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
++ ++ L GA + + ++++ Q WRL TC +LH+G+IH+ NM SL IG +++Q
Sbjct: 167 DIYDINTGILIDFGA-KVNILINQGQIWRLFTCAFLHSGLIHIACNMYSLYIIGPQIQQI 225
Query: 150 FGFVRVGFVYLLSGFGG---AYYL-------------------LFLFNAVSLLVLLAAAL 187
FG V+ +Y S +YY+ L F + + L
Sbjct: 226 FGTVKYLIIYACSCLTASLLSYYMSPNSISVGASGAIFGLMGALLAFAIIERNRIQKRFL 285
Query: 188 LTLVVIIAINLAVGI-LPHVDNFAH 211
+++ +I+INL +G+ + ++DNFAH
Sbjct: 286 FSIMQVISINLFIGLSIKNIDNFAH 310
>gi|417938970|ref|ZP_12582263.1| peptidase, S54 family [Streptococcus infantis SK970]
gi|343390415|gb|EGV02995.1| peptidase, S54 family [Streptococcus infantis SK970]
Length = 224
Score = 59.7 bits (143), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 82/161 (50%), Gaps = 30/161 (18%)
Query: 95 SSSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S++TL + GA+ + Q WRL + ++H G+ H L NMLSL F+G ++EQ FG
Sbjct: 36 SAATLYQFGAVYPPAIKAMPEQIWRLFSATFVHIGLEHFLVNMLSLYFLGRQMEQIFGSK 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV-------------SLLVL-----------LAAALL 188
+ F+YLLSG G + L+F NA+ S++VL L + L
Sbjct: 96 QFFFIYLLSGMMGNLFVLVFSPNAITAGASTALYGMFASIVVLRYASRNPYLQQLGQSYL 155
Query: 189 TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLR 228
+L+V INL +L P + H+GG + G LL V +R
Sbjct: 156 SLLV---INLVGSVLIPGISLAGHLGGAVGGALLAIVFPVR 193
>gi|254549044|ref|ZP_05139491.1| putative integral membrane protein [Mycobacterium tuberculosis
'98-R604 INH-RIF-EM']
Length = 247
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 107 WDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG 166
W V Q +RL+T +LH G +HLL NM +L +G LE G +R G +Y +S GG
Sbjct: 65 WPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGG 124
Query: 167 A--YYLLFLFNAVS------LLVLLAAALLT----------LVVIIAINLAVGIL-PHVD 207
+ YL+ N + + L A + +V +I INLA L P +
Sbjct: 125 SVLVYLIAPLNTATAGASGAVFGLFGATFMVARRLHLDVRWVVALIVINLAFTFLAPAIS 184
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
H+GG + G L+ + P+ ER L QA V + +VA V+LI
Sbjct: 185 WQGHVGGLVTGALVAATYVYAPR----ERRNL-IQATVT--------ITVLVAFVVLIGW 231
Query: 268 FTVGLVMLFRGE 279
TV L+ LF G
Sbjct: 232 RTVDLLALFGGR 243
>gi|15607252|ref|NP_214624.1| Probable conserved integral membrane protein [Mycobacterium
tuberculosis H37Rv]
gi|31791288|ref|NP_853781.1| hypothetical protein Mb0114 [Mycobacterium bovis AF2122/97]
gi|121636023|ref|YP_976246.1| integral membrane protein [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148659873|ref|YP_001281396.1| rhomboid family protein [Mycobacterium tuberculosis H37Ra]
gi|167967299|ref|ZP_02549576.1| conserved integral membrane protein [Mycobacterium tuberculosis
H37Ra]
gi|224988496|ref|YP_002643183.1| integral membrane protein [Mycobacterium bovis BCG str. Tokyo 172]
gi|254366565|ref|ZP_04982609.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|289441479|ref|ZP_06431223.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289568003|ref|ZP_06448230.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289572690|ref|ZP_06452917.1| rhomboid family protein [Mycobacterium tuberculosis K85]
gi|289748582|ref|ZP_06507960.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289756172|ref|ZP_06515550.1| rhomboid family protein [Mycobacterium tuberculosis EAS054]
gi|289760210|ref|ZP_06519588.1| rhomboid family protein [Mycobacterium tuberculosis T85]
gi|289764227|ref|ZP_06523605.1| rhomboid family protein [Mycobacterium tuberculosis GM 1503]
gi|294992953|ref|ZP_06798644.1| putative integral membrane protein [Mycobacterium tuberculosis 210]
gi|297632583|ref|ZP_06950363.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
4207]
gi|297729557|ref|ZP_06958675.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
R506]
gi|298527502|ref|ZP_07014911.1| rhomboid family serine protease [Mycobacterium tuberculosis
94_M4241A]
gi|306774194|ref|ZP_07412531.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|306778939|ref|ZP_07417276.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|306782726|ref|ZP_07421048.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|306787094|ref|ZP_07425416.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|306791651|ref|ZP_07429953.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|306798472|ref|ZP_07436774.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|306801688|ref|ZP_07438356.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|306805900|ref|ZP_07442568.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|306974529|ref|ZP_07487190.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|307082237|ref|ZP_07491407.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|313656884|ref|ZP_07813764.1| putative integral membrane protein [Mycobacterium tuberculosis KZN
V2475]
gi|339630194|ref|YP_004721836.1| hypothetical protein MAF_01110 [Mycobacterium africanum GM041182]
gi|340625145|ref|YP_004743597.1| putative integral membrane protein [Mycobacterium canettii CIPT
140010059]
gi|378769856|ref|YP_005169589.1| hypothetical protein BCGMEX_0114 [Mycobacterium bovis BCG str.
Mexico]
gi|385996882|ref|YP_005915180.1| integral membrane protein [Mycobacterium tuberculosis CTRI-2]
gi|386003192|ref|YP_005921471.1| hypothetical protein MRGA423_00715 [Mycobacterium tuberculosis
RGTB423]
gi|392384830|ref|YP_005306459.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|397671894|ref|YP_006513428.1| hypothetical protein RVBD_0110 [Mycobacterium tuberculosis H37Rv]
gi|424806593|ref|ZP_18232024.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
gi|433625211|ref|YP_007258840.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140060008]
gi|31616873|emb|CAD92975.1| PROBABLE CONSERVED INTEGRAL MEMBRANE PROTEIN [Mycobacterium bovis
AF2122/97]
gi|121491670|emb|CAL70128.1| Probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Pasteur 1173P2]
gi|134152077|gb|EBA44122.1| conserved integral membrane protein [Mycobacterium tuberculosis
str. Haarlem]
gi|148504025|gb|ABQ71834.1| Rhomboid family protein [Mycobacterium tuberculosis H37Ra]
gi|224771609|dbj|BAH24415.1| putative integral membrane protein [Mycobacterium bovis BCG str.
Tokyo 172]
gi|289414398|gb|EFD11638.1| conserved membrane protein [Mycobacterium tuberculosis T46]
gi|289537121|gb|EFD41699.1| rhomboid family protein [Mycobacterium tuberculosis K85]
gi|289541756|gb|EFD45405.1| conserved membrane protein [Mycobacterium tuberculosis T17]
gi|289689169|gb|EFD56598.1| conserved membrane protein [Mycobacterium tuberculosis T92]
gi|289696759|gb|EFD64188.1| rhomboid family protein [Mycobacterium tuberculosis EAS054]
gi|289711733|gb|EFD75749.1| rhomboid family protein [Mycobacterium tuberculosis GM 1503]
gi|289715774|gb|EFD79786.1| rhomboid family protein [Mycobacterium tuberculosis T85]
gi|298497296|gb|EFI32590.1| rhomboid family serine protease [Mycobacterium tuberculosis
94_M4241A]
gi|308217202|gb|EFO76601.1| conserved membrane protein [Mycobacterium tuberculosis SUMu001]
gi|308328061|gb|EFP16912.1| conserved membrane protein [Mycobacterium tuberculosis SUMu002]
gi|308332433|gb|EFP21284.1| conserved membrane protein [Mycobacterium tuberculosis SUMu003]
gi|308336197|gb|EFP25048.1| conserved membrane protein [Mycobacterium tuberculosis SUMu004]
gi|308339800|gb|EFP28651.1| conserved membrane protein [Mycobacterium tuberculosis SUMu005]
gi|308341295|gb|EFP30146.1| conserved membrane protein [Mycobacterium tuberculosis SUMu006]
gi|308347577|gb|EFP36428.1| conserved membrane protein [Mycobacterium tuberculosis SUMu007]
gi|308351519|gb|EFP40370.1| conserved membrane protein [Mycobacterium tuberculosis SUMu008]
gi|308356167|gb|EFP45018.1| conserved membrane protein [Mycobacterium tuberculosis SUMu010]
gi|308360107|gb|EFP48958.1| conserved membrane protein [Mycobacterium tuberculosis SUMu011]
gi|326905869|gb|EGE52802.1| conserved membrane protein [Mycobacterium tuberculosis W-148]
gi|339329550|emb|CCC25185.1| putative conserved integral membrane protein [Mycobacterium
africanum GM041182]
gi|340003335|emb|CCC42454.1| putative conserved integral membrane protein [Mycobacterium
canettii CIPT 140010059]
gi|341600039|emb|CCC62707.1| probable conserved integral membrane protein [Mycobacterium bovis
BCG str. Moreau RDJ]
gi|344217928|gb|AEM98558.1| integral membrane protein [Mycobacterium tuberculosis CTRI-2]
gi|356592177|gb|AET17406.1| Conserved integral membrane protein [Mycobacterium bovis BCG str.
Mexico]
gi|378543381|emb|CCE35652.1| unnamed protein product [Mycobacterium tuberculosis UT205]
gi|380723680|gb|AFE11475.1| putative integral membrane protein [Mycobacterium tuberculosis
RGTB423]
gi|395136798|gb|AFN47957.1| hypothetical protein RVBD_0110 [Mycobacterium tuberculosis H37Rv]
gi|432152817|emb|CCK50026.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140060008]
gi|440579558|emb|CCG09961.1| putative CONSERVED INTEGRAL membrane protein [Mycobacterium
tuberculosis 7199-99]
gi|444893582|emb|CCP42835.1| Probable conserved integral membrane protein [Mycobacterium
tuberculosis H37Rv]
Length = 249
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 107 WDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG 166
W V Q +RL+T +LH G +HLL NM +L +G LE G +R G +Y +S GG
Sbjct: 67 WPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGG 126
Query: 167 A--YYLLFLFNAVS------LLVLLAAALLT----------LVVIIAINLAVGIL-PHVD 207
+ YL+ N + + L A + +V +I INLA L P +
Sbjct: 127 SVLVYLIAPLNTATAGASGAVFGLFGATFMVARRLHLDVRWVVALIVINLAFTFLAPAIS 186
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
H+GG + G L+ + P+ ER L QA V + +VA V+LI
Sbjct: 187 WQGHVGGLVTGALVAATYVYAPR----ERRNL-IQATVT--------ITVLVAFVVLIGW 233
Query: 268 FTVGLVMLFRGE 279
TV L+ LF G
Sbjct: 234 RTVDLLALFGGR 245
>gi|157273306|gb|ABV27205.1| integral membrane protein Rhomboid family protein [Candidatus
Chloracidobacterium thermophilum]
Length = 386
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/212 (26%), Positives = 97/212 (45%), Gaps = 47/212 (22%)
Query: 109 RVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-- 166
+++ + + WRL+ ++LH GVIHL+ANM +L +G +LE +G R +Y+LSG GG
Sbjct: 70 KLIAQGELWRLVVPMFLHIGVIHLVANMYALWVVGPQLESLYGSARFTILYVLSGIGGFV 129
Query: 167 -AYY----------------------LLFLFNAVSLLVLLAAALLTLVV--IIAINLAVG 201
+Y+ L+F++ S + L A + V +A+NL +
Sbjct: 130 ASYFFAHPESIGAGASGALFGMFGALLVFVYKYRSEIPPLVRATMRRGVWLTLALNLIIT 189
Query: 202 I-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVA 260
+P + H+GG + G L + P H+ P RV + + ++A
Sbjct: 190 FSIPFISRSGHVGGLLTGICLALFIPYSP----PSEHKTPWVWRV--------WQIVLLA 237
Query: 261 LVLLIVGFTVGLVMLFRGENGNDHCSWCHYLS 292
+V+L GF +F GN S H+L+
Sbjct: 238 IVVLSFGF------MFWNYRGNS-PSLAHFLA 262
>gi|183230651|ref|XP_651687.2| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
HM-1:IMSS]
gi|169802835|gb|EAL46300.2| peptidase S54 (rhomboid) family protein [Entamoeba histolytica
HM-1:IMSS]
Length = 304
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 28/171 (16%)
Query: 83 FEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFI 142
FE N + GP+S + LGA + +Q WRLIT I+LH G+IHLL N+ + +
Sbjct: 88 FEKPSINWMLGPTSKAMNTLGAKNDYEIKCNYQLWRLITPIFLHGGIIHLLCNLTMQLRL 147
Query: 143 GIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL----VVIIAINL 198
G+ +E+++ R VY +SG G + + + S+ V + +LL + VV I IN
Sbjct: 148 GMIIERRWNSFRFLIVYFVSGIIGNCFSI-ICQPTSIGVGASGSLLGIFGGFVVDIIINK 206
Query: 199 A----------VGIL-------------PHVDNFAHIGGFMAGFLLGFVLL 226
+G L P +D AH+ GF+ G + F L
Sbjct: 207 KKFENRVWLSLIGRLMISIIIIFVFSFAPGIDYSAHVFGFIGGAICAFGLF 257
>gi|259503580|ref|ZP_05746482.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
gi|259168453|gb|EEW52948.1| conserved hypothetical protein [Lactobacillus antri DSM 16041]
Length = 219
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/165 (35%), Positives = 86/165 (52%), Gaps = 32/165 (19%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ + L + GAL+ V + WRL+T +++H G HLL N ++L FIG+ +EQ FG R
Sbjct: 34 TPAVLIRFGALQ-AAAVQAGEWWRLLTPVFVHIGFAHLLINSITLYFIGMYIEQLFGHWR 92
Query: 155 VGFVYLLSGFGG----AYYL-----------LF-LFNAVSL----------LVLLAAALL 188
+ +YL S G AY+L +F LF A + L +L+ L
Sbjct: 93 MLVIYLGSAIVGNLLSAYWLPAGISAGASTGIFGLFGAFIMLGATFRENQALRMLSRQFL 152
Query: 189 TLVVI-IAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
LVV+ IA +L V P +D H+GGF+ GFLL + L+ P+ G
Sbjct: 153 ILVVLNIATDLMV---PGIDLAGHLGGFIGGFLLAY-LVGAPRLG 193
>gi|336391270|ref|ZP_08572669.1| membrane-associated serine protease [Lactobacillus coryniformis
subsp. torquens KCTC 3535]
Length = 209
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 79/157 (50%), Gaps = 26/157 (16%)
Query: 90 PLFGPS--SSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
LFG S S+ L GA + + ++ + Q WRLI I+LH+G++H+ N ++L FIG+++E
Sbjct: 16 TLFGGSQNSNVLVFFGA-KVNILIQQGQWWRLIMPIFLHSGLMHIAVNSVTLYFIGMQIE 74
Query: 148 QQFGFVRVGFVYLLSGF---------------GGAYYLLFLFNAVSLLV-------LLAA 185
FG R +YLLSG G + L LF A +LV + A
Sbjct: 75 SLFGHWRFTLIYLLSGIVGNIASFVFNTGISVGASTALFGLFGAFFMLVEAFRQNTAIRA 134
Query: 186 ALLTLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLL 221
+ I +NLA + P +D H+GG + GFL+
Sbjct: 135 MGQQFALFIVLNLAFDLFNPGIDLAGHVGGLLGGFLV 171
>gi|399041650|ref|ZP_10736664.1| putative membrane protein [Rhizobium sp. CF122]
gi|398060103|gb|EJL51937.1| putative membrane protein [Rhizobium sp. CF122]
Length = 1049
Score = 59.3 bits (142), Expect = 2e-06, Method: Composition-based stats.
Identities = 39/109 (35%), Positives = 58/109 (53%), Gaps = 6/109 (5%)
Query: 74 VARFLGRLSF--EPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIH 131
VA + G L F +P + PS TL LGA + + ++ +HQ WRL T LH ++H
Sbjct: 279 VAIYAGELIFGVDPSQAG---SPSIQTLFMLGATQQEALLQDHQWWRLFTAPLLHGSIVH 335
Query: 132 LLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLL 180
L N L+L F G LE+ G+ ++ S GGA + LFNA +++
Sbjct: 336 LGFNCLALWFAGRLLERLIGWRWFAAIFFASALGGAIASV-LFNAPNIV 383
>gi|66350796|emb|CAI95607.1| rhomboid 5 homolog 1 (Drosophila) [Homo sapiens]
Length = 231
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 55/219 (25%), Positives = 87/219 (39%), Gaps = 47/219 (21%)
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE-- 147
P P + L+ L L GW I I+L +GV N+ S +F+ R E
Sbjct: 47 PFLNPEMTVLRDLEKL---------AGWHRIAIIYLLSGVT---GNLASAIFLPYRAEVG 94
Query: 148 ---QQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILP 204
QFG + FV L F + +L A L+ ++ G+LP
Sbjct: 95 PAGSQFGILACLFVEL-------------FQSWQILARPWRAFFKLLAVVLFLFTFGLLP 141
Query: 205 HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLL 264
+DNFAHI GF++G L F L FG + ++ Q + +Q V + L+
Sbjct: 142 WIDNFAHISGFISGLFLSFAFLPYISFGKFDLYRKRCQIII------FQVVFLGLLAGLV 195
Query: 265 IVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
++ + + C WC +L+C+P + C
Sbjct: 196 VLFYVYPV-----------RCEWCEFLTCIPFTDKFCEK 223
>gi|365925240|ref|ZP_09448003.1| rhomboid family integral membrane protein [Lactobacillus mali KCTC
3596 = DSM 20444]
gi|420266562|ref|ZP_14769020.1| Integral membrane protein, Rhomboid family [Lactobacillus mali KCTC
3596 = DSM 20444]
gi|394425142|gb|EJE98158.1| Integral membrane protein, Rhomboid family [Lactobacillus mali KCTC
3596 = DSM 20444]
Length = 216
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 90/201 (44%), Gaps = 41/201 (20%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S L + GA + + ++ Q WRLIT ++LH G H++ NM++L F+GI+LE G R
Sbjct: 30 SVGVLVEFGA-KVNTLIVAGQWWRLITPMFLHIGFEHIVLNMITLYFVGIQLENILGRGR 88
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL------------------------ 190
VYL+SG G F FN +L + AL L
Sbjct: 89 FLAVYLVSGIAGNLA-SFAFNPDALSAGASTALFGLFGIYLMMGESFSSNPYIRAMGRQF 147
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHN 250
++++ +N+ G VD HIGG + GFL+G+ + RV S
Sbjct: 148 LLLVVLNIMFGFYGSVDLAGHIGGLVGGFLMGYCV---------------GVPRVGSVPL 192
Query: 251 PYQYVLCIVALVLLIVGFTVG 271
P + V + + L I+ FT+G
Sbjct: 193 PKRIVSTLALVFLCIMMFTLG 213
>gi|420143494|ref|ZP_14650991.1| Hypothetical protein Y7C_88798 [Lactococcus garvieae IPLA 31405]
gi|391856365|gb|EIT66905.1| Hypothetical protein Y7C_88798 [Lactococcus garvieae IPLA 31405]
Length = 230
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 32/194 (16%)
Query: 95 SSSTLQKLGALEWDRVVHE-HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+ L GAL ++ + Q WRL+T I++H G H L N L+L FIG ++E FG +
Sbjct: 40 SAINLFNTGALFPPAILADPTQLWRLVTPIFIHIGWTHFLMNTLTLFFIGRQVEAVFGSL 99
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAAL---------------LTLV 191
+Y+LSG FG A +F N++ S+ L AA T
Sbjct: 100 NFSLIYILSGIFGNAATFIFSPNSLSAGASTSIFGLFAAIAGIGFFTGHPMLKQIGKTFT 159
Query: 192 VIIAINLAVGI--LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRH 249
++IAINL + L V+ ++H+GG + G LL V P++ ++ +P Q R+ S
Sbjct: 160 ILIAINLFFNMFNLSSVNIWSHVGGAVGGLLLAPV--FPPKY---FKNSIPMQNRILSGV 214
Query: 250 NPYQYVLCIVALVL 263
VL IV L+L
Sbjct: 215 T--IVVLFIVFLIL 226
>gi|365902867|ref|ZP_09440690.1| membrane-associated serine protease [Lactobacillus malefermentans
KCTC 3548]
Length = 226
Score = 59.3 bits (142), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 59/204 (28%), Positives = 99/204 (48%), Gaps = 46/204 (22%)
Query: 93 GPSSST--LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
G S++T L + GA + ++ Q WRL T ++LH G H+L N ++L F+G+++E+ F
Sbjct: 33 GGSTNTYVLIQFGA-KVSSLIQAGQWWRLFTPVFLHIGFEHILLNGITLYFLGLQIERIF 91
Query: 151 GFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALL---------------------- 188
G R +++++ GG F+F+ SL + A+
Sbjct: 92 GHWRYFIIFVVTAIGGNLA-SFVFSPNSLSAGASTAIFGLFGAFLMLGESFWENPYIRQM 150
Query: 189 --TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
T + I +NL +L P +D HIGG +AGFL+G+V+ L P+ + + V
Sbjct: 151 TKTFALFIVLNLGFDLLSPGIDLSGHIGGLVAGFLIGYVVAL-PK-------NILGKVSV 202
Query: 246 KSRHNPYQYVLCIVALVLLIVGFT 269
R ++A+V+LIVGF
Sbjct: 203 AKR---------VIAVVVLIVGFV 217
>gi|268319881|ref|YP_003293537.1| hypothetical protein FI9785_1410 [Lactobacillus johnsonii FI9785]
gi|262398256|emb|CAX67270.1| conserved hypothetical protein [Lactobacillus johnsonii FI9785]
Length = 228
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 81/174 (46%), Gaps = 31/174 (17%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L +LGA+ V HQ WRL T +LH G +H+ +N + + ++G +E G R
Sbjct: 39 NILVRLGAMNNQLVTVGHQWWRLFTAQFLHIGWLHIASNAVMIYYMGQFMEPLLGHWRFL 98
Query: 157 FVYLLSGFGG-----AYY------------LLFLFNAVSLLVLLAAALLTL-------VV 192
VYLLSG GG AY L LF V L L A+ + +
Sbjct: 99 TVYLLSGIGGNLLSYAYVSDSVVSAGASTALFGLFGVVIALYLANRAIPAINYLGRQALA 158
Query: 193 IIAINLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+ INLA+ + H+D H+GG ++GFLLG + FG A Q + RV
Sbjct: 159 LAIINLALDLFASHIDILGHLGGLISGFLLGII------FGSAHLRQYHHKLRV 206
>gi|426254137|ref|XP_004020741.1| PREDICTED: LOW QUALITY PROTEIN: inactive rhomboid protein 1 [Ovis
aries]
Length = 857
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 85/203 (41%), Gaps = 41/203 (20%)
Query: 123 IWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AYYLLFLFNAV--- 177
++LHAGV+H L ++ + + LE+ G+ R+ +++LSG G A L + A
Sbjct: 662 LFLHAGVLHCLVSVCFQMTVLRDLEKLAGWHRISIIFILSGITGNLASALFLPYRAEVGN 721
Query: 178 -------------------SLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAG 218
+L A L+ ++ G+LP +DNFAHI GF++G
Sbjct: 722 SGHSGEWAGCHYPTWAQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFISG 781
Query: 219 FLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRG 278
L F L FG + ++ Q + + LV L + + ++ F
Sbjct: 782 LFLSFAFLPYISFGKFDLYRKRCQ-------------IIVFQLVFLGLLAGLVVLFYFYP 828
Query: 279 ENGNDHCSWCHYLSCVPTSKWKC 301
C WC +L+C+P + C
Sbjct: 829 VR----CEWCEFLTCIPFTDKFC 847
>gi|116628516|ref|YP_821135.1| membrane-associated serine protease [Streptococcus thermophilus
LMD-9]
gi|387910529|ref|YP_006340835.1| membrane-associated serine protease [Streptococcus thermophilus
MN-ZLW-002]
gi|116101793|gb|ABJ66939.1| Membrane-associated serine protease [Streptococcus thermophilus
LMD-9]
gi|387575464|gb|AFJ84170.1| membrane-associated serine protease [Streptococcus thermophilus
MN-ZLW-002]
Length = 224
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 96/205 (46%), Gaps = 36/205 (17%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEH-QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
N S +L K+GA+ V + + WRLIT I++H GV H L NML+L F+G E
Sbjct: 30 NSFQATSPLSLFKMGAMFGTFVQYNPLELWRLITPIFVHIGVEHFLFNMLTLYFMGRMAE 89
Query: 148 QQFGFVRVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL------------ 188
Q FG +R +YLL+G G A+ L F N + SL L +A ++
Sbjct: 90 QIFGTLRFLGLYLLAGVMGNAFTLFFTPNVIAAGASTSLFGLFSAIVILGYYSHSPLLNQ 149
Query: 189 ---TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+ +I INL + P V H+GG + G L L A + ++R
Sbjct: 150 LGRNYLALIVINLIFNLFTPSVGITGHLGGLVGGALAAIFL--------ANK----VESR 197
Query: 245 VKSRHNPYQYVLCIVALVLLIVGFT 269
+ S+ + L V L+L+++GFT
Sbjct: 198 LFSKGWRFTSFLTYVTLLLIVLGFT 222
>gi|443287776|ref|ZP_21026871.1| Rhomboid family protein [Micromonospora lupini str. Lupac 08]
gi|385882192|emb|CCH21804.1| Rhomboid family protein [Micromonospora lupini str. Lupac 08]
Length = 303
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 72/139 (51%), Gaps = 19/139 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AY 168
+ E Q +RL+T ++LH GVIHLL NM +L +G LE G +R G +YL++G GG A
Sbjct: 134 IAEGQWYRLVTAMFLHYGVIHLLLNMWALWVLGRSLEANLGPLRFGALYLIAGLGGNVAA 193
Query: 169 YLLFLFN-----AVSLLVLLAAALLTL-----------VVIIAINLAVGI-LPHVDNFAH 211
YL N A + + L AAL+ + + I+ INL + +P + H
Sbjct: 194 YLFSAQNSATAGASTAVFGLFAALIIIERKLGRDISQVIPILVINLVFTLTVPGISIPGH 253
Query: 212 IGGFMAGFLLGFVLLLRPQ 230
+GG + G + VL P+
Sbjct: 254 LGGLVVGAAMSLVLAYAPR 272
>gi|347520690|ref|YP_004778261.1| hypothetical protein LCGT_0084 [Lactococcus garvieae ATCC 49156]
gi|385832053|ref|YP_005869828.1| hypothetical protein [Lactococcus garvieae Lg2]
gi|343179258|dbj|BAK57597.1| conserved hypothetical protein [Lactococcus garvieae ATCC 49156]
gi|343181206|dbj|BAK59544.1| conserved hypothetical protein [Lactococcus garvieae Lg2]
Length = 230
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 95/194 (48%), Gaps = 32/194 (16%)
Query: 95 SSSTLQKLGALEWDRVVHE-HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+ L GAL ++ + Q WRL+T I++H G H L N L+L FIG ++E FG +
Sbjct: 40 SAINLFNTGALFPPAILADPTQLWRLVTPIFIHIGWTHFLMNTLTLFFIGRQVEAVFGSL 99
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAAL---------------LTLV 191
+Y+LSG FG A +F N++ S+ L AA T
Sbjct: 100 NFSLIYILSGIFGNAATFIFSPNSLSAGASTSIFGLFAAIAGIGFFTGHPMLKQIGKTFT 159
Query: 192 VIIAINLAVGI--LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRH 249
++IAINL + L V+ ++H+GG + G LL V P++ ++ +P Q R+ S
Sbjct: 160 ILIAINLFFNMFNLSSVNIWSHVGGAVGGLLLAPV--FPPKY---FKNSVPMQNRILSGV 214
Query: 250 NPYQYVLCIVALVL 263
VL IV L+L
Sbjct: 215 T--VVVLFIVFLIL 226
>gi|23099378|ref|NP_692844.1| hypothetical protein OB1923 [Oceanobacillus iheyensis HTE831]
gi|22777607|dbj|BAC13879.1| hypothetical conserved protein [Oceanobacillus iheyensis HTE831]
Length = 518
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 68/137 (49%), Gaps = 23/137 (16%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
TL ++GA +++ ++ E + WRL+T ++LH G +H+L NM++L ++G +E+ FG R
Sbjct: 212 DTLIQMGA-KYNPLIMEGEWWRLLTSMFLHIGFVHILMNMVALFYLGTAVERIFGRTRFL 270
Query: 157 FVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAALLTLVVIIA 195
+Y L G G+ + L F + V + +V I+
Sbjct: 271 VIYFLGGIAGSIASFATSISISAGASGAIFGLFGALLFFGLIYKDVFKDTMGMNIVFILV 330
Query: 196 INLAVGI-LPHVDNFAH 211
+NL +G +P +D AH
Sbjct: 331 VNLVIGFSIPEIDMGAH 347
>gi|421276262|ref|ZP_15727085.1| hypothetical protein SPAR10_0144 [Streptococcus mitis SPAR10]
gi|395878215|gb|EJG89282.1| hypothetical protein SPAR10_0144 [Streptococcus mitis SPAR10]
Length = 224
Score = 58.9 bits (141), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 81/161 (50%), Gaps = 30/161 (18%)
Query: 95 SSSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S++TL K GA+ + Q WRL + ++H G+ H L NMLSL F+G ++E FG
Sbjct: 36 SAATLYKFGAVYPPAIKAMPEQIWRLFSATFVHIGLEHFLVNMLSLYFLGRQMEDIFGSK 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV-------------SLLVL-----------LAAALL 188
+ F+YLLSG G + L+F NA+ S++VL L + L
Sbjct: 96 QFFFIYLLSGMMGNLFVLVFSPNAITAGASTALYGMFASIVVLRYASRNPYLQQLGQSYL 155
Query: 189 TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLR 228
+L+V INL +L P + H+GG + G LL V +R
Sbjct: 156 SLLV---INLVGSVLIPGISLAGHLGGAVGGALLAIVFPVR 193
>gi|94312789|ref|YP_585998.1| intramembrane serine protease [Cupriavidus metallidurans CH34]
gi|93356641|gb|ABF10729.1| putative intramembrane serine protease [Cupriavidus metallidurans
CH34]
Length = 554
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 71/155 (45%), Gaps = 33/155 (21%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
LGAL D Q WRL+T +LH + HL ANM+ L +G +E+ FG +Y+
Sbjct: 232 LGALTQD-----GQWWRLLTATFLHGSLKHLAANMVVLYLLGTHVERFFGTRSFLLIYVG 286
Query: 162 SGFGGAYYLLFLFNAVSLLV------------LLAAALL---------------TLVVII 194
+G G+ L+ S+ V LL AALL V++I
Sbjct: 287 AGLLGSALSLYFAAQASVSVGASGAVFGIGGALLVAALLHRRELPQSIRNRLVSDAVIMI 346
Query: 195 AINLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLR 228
+LA G L VDN AH+GG + G LL L +R
Sbjct: 347 GYSLAQGFLSTRVDNAAHVGGLIGGALLALCLPVR 381
>gi|225375145|ref|ZP_03752366.1| hypothetical protein ROSEINA2194_00769 [Roseburia inulinivorans DSM
16841]
gi|225213019|gb|EEG95373.1| hypothetical protein ROSEINA2194_00769 [Roseburia inulinivorans DSM
16841]
Length = 357
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 79/172 (45%), Gaps = 33/172 (19%)
Query: 81 LSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLV 140
LSF E+ + S GA+ + + HQ WRL+T ++LH GV HL+ NM+
Sbjct: 184 LSFGGATEDAFYMASR------GAMYPEFLTINHQWWRLLTAMFLHFGVAHLMNNMVIFC 237
Query: 141 FIGIRLEQQFGFVRVGFVYLLSGFGG---AYYLLFL--------------FNAVSLLV-- 181
+G RLE+ G ++ VY +G GG +Y ++ L F + L+
Sbjct: 238 CVGSRLEKYIGHWKMAVVYFAAGIGGGLLSYIMMLLSGNYAVSGGASGAVFGVIGGLLWV 297
Query: 182 -------LLAAALLTLVVIIAINLAVGILP-HVDNFAHIGGFMAGFLLGFVL 225
L ++++I ++L G VDN+ H+GG + GFL +L
Sbjct: 298 VIYHRGKLEGMTTKGILIMIVLSLYFGFTSIGVDNWCHVGGMLCGFLATLIL 349
>gi|168210042|ref|ZP_02635667.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
gi|170711841|gb|EDT24023.1| rhomboid family protein [Clostridium perfringens B str. ATCC 3626]
Length = 342
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 79/144 (54%), Gaps = 24/144 (16%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+GA + ++ + +RL+T ++LH G++HLL NM +L +G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 162 SGFGGAYYLLFLFNAV-------SLLVLLAAALL---------------TLVVIIAINLA 199
SG + + L+ F+ V ++ LL AAL+ ++VII +N+
Sbjct: 249 SGIVASIFSLY-FSPVMGVGASGAIFGLLGAALVFAYNEKDRIGKALVTNIIVIILLNVF 307
Query: 200 VGI-LPHVDNFAHIGGFMAGFLLG 222
+ + + ++D AH GGF+AG +LG
Sbjct: 308 ISLSMSNIDISAHFGGFIAGAILG 331
>gi|239827720|ref|YP_002950344.1| rhomboid family protein [Geobacillus sp. WCH70]
gi|239808013|gb|ACS25078.1| Rhomboid family protein [Geobacillus sp. WCH70]
Length = 389
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 49/164 (29%), Positives = 81/164 (49%), Gaps = 23/164 (14%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ + L + GA +++ ++ E + WR T I+LH G +HLL N +L ++G+ +E+ +G R
Sbjct: 208 NPAVLIQYGA-KFNPLIQEGEWWRFFTPIFLHIGFLHLLMNTFALYYLGMTVERLYGSWR 266
Query: 155 VGFVYLLSGF-----------------GGAYYLLF----LFNAVSLLVLLAAALLTLVVI 193
F+YL++GF GA + LF F V + ++ +
Sbjct: 267 FFFIYLIAGFFGTLGSFLFTTSLSAGASGAIFGLFGALLYFGTVYRHLFFQTIGTNIIGL 326
Query: 194 IAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
I INL GI+ P +DN HIGG + GFL ++ L W +
Sbjct: 327 IIINLLFGIMVPGIDNAGHIGGLIGGFLASGIVHLPNHLDWKRQ 370
>gi|395532997|ref|XP_003768550.1| PREDICTED: inactive rhomboid protein 2 [Sarcophilus harrisii]
Length = 827
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 92/211 (43%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG+ H L ++L + I LE+ G++R+ +++LSG G A +L
Sbjct: 623 QFYRLWLSLFLHAGLGHCLVSVLFQMTILRDLEKLAGWLRIAIIFILSGITGNLASAIFL 682
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ L + LL A L L I+ G+LP +DN A
Sbjct: 683 PYRAEVGPAGSQFGILACLFVELIQSWQLLEKPWKAFLNLSGIVFFLFICGLLPWIDNIA 742
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG ++++ + + +V+LV+ G
Sbjct: 743 HIFGFLSGLLLSFAFLPYITFGTGDKYR--------------KRAMILVSLVIF-AGLFA 787
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 788 SLVIWLYVYPIN--WPWIEYLTCFPFTSRFC 816
>gi|395242536|ref|ZP_10419533.1| Putative membrane protein [Lactobacillus pasteurii CRBIP 24.76]
gi|394480268|emb|CCI85773.1| Putative membrane protein [Lactobacillus pasteurii CRBIP 24.76]
Length = 240
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 91/220 (41%), Gaps = 55/220 (25%)
Query: 82 SFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVF 141
+F ENP +TL KLGA+ V HQ WRL T +LH G++HL++N + + +
Sbjct: 30 TFMGGSENP------ATLMKLGAMNNYAVAAGHQWWRLFTAQFLHIGIMHLVSNAVMIFY 83
Query: 142 IGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLV-VIIAINLAV 200
+G E G R +YLLSG GG + SL + AL L+ +IAI+
Sbjct: 84 LGNYFESIIGHWRFWVIYLLSGVGGNLMSFAFGSDNSLSAGASTALFGLLGAVIAISRRR 143
Query: 201 G-------------------------------ILPHVDNFAHIGGFMAGFLLGFVLLLRP 229
+P+VD HIGG + GF+ VL
Sbjct: 144 ASASPNSSLSAMLNYFGRQAAALAIINLAIDIFMPNVDIQGHIGGLLMGFMATAVL---- 199
Query: 230 QFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
+LP + K R + + AL+++ V FT
Sbjct: 200 ------GDRLPIKQNTKFR-------IIMAALMIVYVVFT 226
>gi|168699238|ref|ZP_02731515.1| Rhomboid-like protein [Gemmata obscuriglobus UQM 2246]
Length = 418
Score = 58.5 bits (140), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 91/204 (44%), Gaps = 40/204 (19%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
PS + L K GA ++ + WR +TC+++H G++H+L NM L G +E+ G
Sbjct: 100 PSPAELLKWGA-DFGPNTLNGEWWRALTCMFVHIGILHILMNMWVLSATGPLVERMLGNA 158
Query: 154 RVGFVYLLSGFGGAYYLLFLFNAV--------------SLLVLL--------AAALLTL- 190
YL+SG GG+ L+L V +LL LL AAL L
Sbjct: 159 GFLVAYLVSGLGGSLASLWLNPGVVSAGASGAVFGIYGALLGLLQRQRTSIPPAALTGLK 218
Query: 191 ---VVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVK 246
+ +A N+ G+ P++D AH GGF+ GFL G VL R PA +
Sbjct: 219 NSGLGFLAYNVFFGLTQPNIDLAAHAGGFVTGFLCGLVL---------SRPFTPAGVAAR 269
Query: 247 SRHNPYQYVLCIVALVLLIVGFTV 270
N +V V++ VG T+
Sbjct: 270 PTRN---FVTGFGGFVVITVGLTL 290
>gi|431906772|gb|ELK10893.1| Rhomboid family member 1 [Pteropus alecto]
Length = 867
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/200 (27%), Positives = 85/200 (42%), Gaps = 41/200 (20%)
Query: 126 HAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYLLF--------- 172
AG++H L ++ + + LE+ G+ R+ +YLLSG G A +L +
Sbjct: 675 RAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGVTGNLASAIFLPYRAEVGPAGS 734
Query: 173 -----------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLL 221
LF + +L A L+ ++ G+LP +DNFAHI GF++G L
Sbjct: 735 QFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFTFGLLPWIDNFAHISGFVSGLFL 794
Query: 222 GFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENG 281
F L FG R + Y+ I+ + +G GLV+LF
Sbjct: 795 SFAFLPYISFG---------------RFDLYRKRCQIIVFQAIFLGLLAGLVVLFYFYPV 839
Query: 282 NDHCSWCHYLSCVPTSKWKC 301
C WC +L+C+P + C
Sbjct: 840 R--CEWCEFLTCIPFTDKFC 857
>gi|399889571|ref|ZP_10775448.1| hypothetical protein CarbS_13682 [Clostridium arbusti SL206]
Length = 323
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 78/153 (50%), Gaps = 23/153 (15%)
Query: 92 FGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
F L LGA + + +++ + +RL TC++LH+G++H+ +NM SL IG +E FG
Sbjct: 161 FDIDIRVLDFLGAKD-NTLINSGEYYRLFTCMFLHSGIVHIASNMYSLYSIGGLVESIFG 219
Query: 152 FVRVGFVYLLSGFGGAYYLLFLFNAVS------LLVLLAAALL---------------TL 190
+ +YLLSG + + + +S + +L L+ +
Sbjct: 220 RKKYIIMYLLSGLIASLFSYVFSSGISVGASGAIFGVLGGVLVISHKLKHRIGKGLFRNI 279
Query: 191 VVIIAINLAVG-ILPHVDNFAHIGGFMAGFLLG 222
+ +IAINL + +P++D AH+GG ++G ++
Sbjct: 280 IFVIAINLFISFTIPNIDISAHLGGLISGIIIS 312
>gi|406027090|ref|YP_006725922.1| membrane-associated serine protease [Lactobacillus buchneri CD034]
gi|405125579|gb|AFS00340.1| membrane-associated serine protease [Lactobacillus buchneri CD034]
Length = 220
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 97/204 (47%), Gaps = 42/204 (20%)
Query: 87 KENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
ENP+ TL + GA +++ ++ + WRLIT +++H G H+L N ++L FIG +
Sbjct: 31 TENPV------TLVEFGA-KYNPLIRAGEYWRLITPMFIHIGFTHILMNGITLYFIGQYV 83
Query: 147 EQQFGFVRVGFVYLLSGF--------------GGAYYLLF-LFNAVSLL-------VLLA 184
EQ FG R ++ +SG GA +F LF A +L +
Sbjct: 84 EQLFGHWRFAVIFFVSGIMGNLGSFAFTDSLSAGASTAIFGLFGAFMMLGESFSKNPAIV 143
Query: 185 AALLTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
+ T ++ I +N+ I + +D H+GG + GFL+ +V G+++ Q
Sbjct: 144 SMAKTFLLFIVLNIGTDIFVSGIDIAGHLGGLVGGFLVAYV----TGVGFSKTSQ---TK 196
Query: 244 RVKSRHNPYQYVLCIVALVLLIVG 267
R+ S +L ++ALVL +G
Sbjct: 197 RIIS-----AIMLVVIALVLFTIG 215
>gi|409386424|ref|ZP_11238834.1| GlpG protein (membrane protein of glp regulon) [Lactococcus
raffinolactis 4877]
gi|399206351|emb|CCK19749.1| GlpG protein (membrane protein of glp regulon) [Lactococcus
raffinolactis 4877]
Length = 227
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 84/182 (46%), Gaps = 34/182 (18%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF--- 164
D + H WRL+T I++H G H L N SL+FIG ++E FG R +YLLSG
Sbjct: 52 DLIEHPTHLWRLVTPIFVHIGWEHFLLNFFSLIFIGRQIEDVFGSRRFLVIYLLSGIFGN 111
Query: 165 -------------GGAYYLLFLFNAVSLLVLLA------AALLTLVVIIAINLAVGIL-P 204
G + L +F A+++L L A V+I NL + + P
Sbjct: 112 ILAFFVQPNILLAGASTSLFGIFGAMAMLGYLTKNPSFQAVGKQFAVLILANLVINLFQP 171
Query: 205 HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLL 264
V F HIGG + G VLL P +A + Q+++ +++ +V+ VL+
Sbjct: 172 AVGIFGHIGGALGG-----VLLAAP---FAPK---ILQSKISETQKVTFFIIYLVSAVLM 220
Query: 265 IV 266
+V
Sbjct: 221 VV 222
>gi|219124310|ref|XP_002182450.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406411|gb|EEC46351.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 522
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 76/165 (46%), Gaps = 24/165 (14%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIR 145
L NP+ GP + G + E+Q WRL+T +LH GV+HLLAN L +++
Sbjct: 295 LDVNPMIGPYPDAFSEWGGKNAYLMTEENQWWRLLTSSFLHVGVLHLLANALCVIWSVAV 354
Query: 146 LEQQFGFVRVGFVYLLSGFG-------GAYYLLFLFNAVSLLVLLAAALLTLV--VIIAI 196
EQ++G R V+L+S G G + + ++ +L+ L AA L ++ +
Sbjct: 355 FEQEWGSCRWLLVFLVSSVGCTACASLGDADTIGVGSSGTLMGLYAAKLAQVMSCTCFEV 414
Query: 197 NLAVGILPHVDNF---------------AHIGGFMAGFLLGFVLL 226
+ ++ H D H+GG + GFL+G ++
Sbjct: 415 HKSLDGNIHYDRMCGVLVGIAILSMLSACHVGGLVTGFLVGILIF 459
>gi|379733579|ref|YP_005327084.1| putative rhomboid protease [Blastococcus saxobsidens DD2]
gi|378781385|emb|CCG01035.1| Putative rhomboid protease [Blastococcus saxobsidens DD2]
Length = 253
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 48/143 (33%), Positives = 74/143 (51%), Gaps = 20/143 (13%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
++ V Q WRL+T +LH G++HL NML+L+ G LE+Q G R +YL+S G
Sbjct: 80 QYPLAVEFGQPWRLLTAAFLHIGLLHLALNMLALLIFGSELERQLGRWRYVGLYLVSALG 139
Query: 166 GAYYL-LF----------------LFNAVSLLVLLAAA-LLTLVVIIAINLAVGILPHVD 207
G+ + LF L A+ +L+L+ + ++V++AIN+ + LP V
Sbjct: 140 GSTAIQLFGDPLRPVAGASTAIYGLLGALGVLMLVRRQDIRGILVLLAINVFISFLPGVS 199
Query: 208 NFAHIGGFMAGFLLG--FVLLLR 228
H+GG + G L FVL R
Sbjct: 200 LLGHLGGLVTGAALAGLFVLTRR 222
>gi|225386984|ref|ZP_03756748.1| hypothetical protein CLOSTASPAR_00734 [Clostridium asparagiforme
DSM 15981]
gi|225046996|gb|EEG57242.1| hypothetical protein CLOSTASPAR_00734 [Clostridium asparagiforme
DSM 15981]
Length = 193
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 55/163 (33%), Positives = 73/163 (44%), Gaps = 43/163 (26%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ VV Q +RL+T +++H GV HLL NML L +G LE+ G V+ YLL
Sbjct: 32 GAMFAPLVVDHGQYYRLVTSVFMHFGVSHLLNNMLVLFVLGDNLERALGHVKYLIFYLLC 91
Query: 163 GFGGAYYLLFLFNAVSLLVLLAAALLT---------------LVVIIAIN---------- 197
G G N VS+ V L L+ LV + +N
Sbjct: 92 GVGA--------NLVSMTVNLMTGSLSVGAGASGAIFGVVGGLVYAVGVNRGRLEDLTSR 143
Query: 198 -LAVGIL---------PHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
L V IL ++DN AHIGG AG LLG +L +P+
Sbjct: 144 QLGVMILLTLYHGFTSMNIDNAAHIGGLAAGILLGILLYRKPR 186
>gi|160901697|ref|YP_001567278.1| rhomboid family protein [Petrotoga mobilis SJ95]
gi|160359341|gb|ABX30955.1| Rhomboid family protein [Petrotoga mobilis SJ95]
Length = 226
Score = 58.5 bits (140), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 84/177 (47%), Gaps = 37/177 (20%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FGGAYYLLFLFN 175
+RLIT +++H G+ H+ NM++L ++G +E+ +G R +Y+LSG FG LFL N
Sbjct: 52 FRLITSMFVHGGLFHIFFNMIALFYVGNIVERAYGKERFISIYMLSGIFGNLLTHLFLPN 111
Query: 176 AVSL-----------------------LVLLAAALLTLVVIIAINLAVGILP--HVDNFA 210
A+S+ +L L+ II IN+ G LP +++NFA
Sbjct: 112 AISVGASGAIFGLIGLLFGAGFRHDTPTILRPVTGTALLPIILINVIWGFLPGANINNFA 171
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPY-QYVLCIVALVLLIV 266
H+GG GF FGW + ++ R Y Y L I + VLL++
Sbjct: 172 HLGGLGIGF----------TFGWLTSIRYTKRSYQGWRTFSYLSYGLIIASFVLLLI 218
>gi|335357178|ref|ZP_08549048.1| rhomboid family integral membrane protein [Lactobacillus animalis
KCTC 3501]
Length = 224
Score = 58.2 bits (139), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 44/138 (31%), Positives = 72/138 (52%), Gaps = 23/138 (16%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+++ ++ + + WRL T +++H G+ HL N+L+L F+G++LEQ FG R +YL+SG G
Sbjct: 43 KYNPLIIQGELWRLFTPMFIHIGLEHLALNLLTLYFLGVQLEQLFGKWRFLALYLISGVG 102
Query: 166 GAYYLLFLFN------AVSLLVLLAAALL----------------TLVVIIAINLAVGIL 203
G L N + SL L A L+ +V+I +NL +
Sbjct: 103 GNILSFALSNNISAGASTSLFGLFGAYLMLGESFRQNQYIRMISRQFLVLIVLNLGFDLF 162
Query: 204 P-HVDNFAHIGGFMAGFL 220
+D + H+GG +AGFL
Sbjct: 163 AGGIDIWGHLGGLLAGFL 180
>gi|28210270|ref|NP_781214.1| rhomboid family membrane protein [Clostridium tetani E88]
gi|28202706|gb|AAO35151.1| conserved membrane protein (rhomboid family) [Clostridium tetani
E88]
Length = 345
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/130 (32%), Positives = 69/130 (53%), Gaps = 22/130 (16%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLF 174
Q +RL+TCI+LH G+IHL NM +L IG +E+ +G + +Y LSG + F+
Sbjct: 211 QYYRLLTCIFLHGGLIHLALNMYALSAIGPLVEKIYGKFKYLAIYFLSGICSSLLSYFMS 270
Query: 175 NAVSLLV------LLAAALL---------------TLVVIIAINLAVGI-LPHVDNFAHI 212
+++S+ LL A L+ ++ +I +NL +G + +VDNF HI
Sbjct: 271 SSISIGASGAIFGLLGACLIISLKYKDRVGKAFVNNIISVIFVNLIIGFSISNVDNFGHI 330
Query: 213 GGFMAGFLLG 222
GG + G ++
Sbjct: 331 GGLIGGVVIS 340
>gi|145596990|ref|YP_001161287.1| rhomboid family protein [Salinispora tropica CNB-440]
gi|145306327|gb|ABP56909.1| Rhomboid family protein [Salinispora tropica CNB-440]
Length = 303
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AY 168
+ + Q +RL+T ++LH GVIHLL NM +L +G LE G R +YL++G GG A
Sbjct: 134 IADGQWYRLVTAMFLHYGVIHLLLNMYALWILGRTLEASLGPARFLALYLVAGLGGNVAA 193
Query: 169 YLLFLFNAVS------LLVLLAAALLT----------LVVIIAINLAVGI-LPHVDNFAH 211
YL+ NA + + L AA + ++ I+ INL + +P + H
Sbjct: 194 YLISAPNAATAGASTAIFGLFAALFVVGRRMGRDVSQVLPILVINLVFTLTVPGISIPGH 253
Query: 212 IGGFMAGFLLGFVLLLRPQ 230
+GG G L+ FVL P+
Sbjct: 254 LGGLAVGGLMAFVLAYAPR 272
>gi|430805416|ref|ZP_19432531.1| intramembrane serine protease [Cupriavidus sp. HMR-1]
gi|429502334|gb|ELA00646.1| intramembrane serine protease [Cupriavidus sp. HMR-1]
Length = 533
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/155 (33%), Positives = 71/155 (45%), Gaps = 33/155 (21%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
LGAL D Q WRL+T +LH + HL ANM+ L +G +E+ FG +Y+
Sbjct: 211 LGALTQD-----GQWWRLLTATFLHGSLKHLAANMVVLYLLGKHVERFFGTRSFLLIYVG 265
Query: 162 SGFGGAYYLLFLFNAVSLLV------------LLAAALL---------------TLVVII 194
+G G+ L+ S+ V LL AALL V++I
Sbjct: 266 AGLLGSALSLYFAAQTSVSVGASGAVFGIGGALLVAALLHRRELPQNIRNRLVSDAVIMI 325
Query: 195 AINLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLR 228
+LA G L VDN AH+GG + G LL L +R
Sbjct: 326 GYSLAQGFLSTRVDNAAHVGGLIGGVLLALCLPVR 360
>gi|18310434|ref|NP_562368.1| rhomboid family protein [Clostridium perfringens str. 13]
gi|18145114|dbj|BAB81158.1| conserved hypothetical protein [Clostridium perfringens str. 13]
Length = 342
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 79/144 (54%), Gaps = 24/144 (16%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+GA + ++ + +RL+T ++LH G++HLL NM +L +G +E+ +G + +Y +
Sbjct: 189 MGAKHNNAIIFHGEYYRLVTSMFLHGGIVHLLFNMYALYILGDFIERIYGAKKYLAIYFV 248
Query: 162 SGFGGAYYLLFLFNAV-------SLLVLLAAALL---------------TLVVIIAINLA 199
SG + + L+ F+ V ++ LL AAL+ ++VII +N+
Sbjct: 249 SGIVASIFSLY-FSPVMGVGASGAIFGLLGAALVFAYNEKDRIGKALVTNIIVIILLNVF 307
Query: 200 VGI-LPHVDNFAHIGGFMAGFLLG 222
+G+ + ++D A GGF+AG +LG
Sbjct: 308 IGLSMSNIDISARFGGFIAGAILG 331
>gi|432098908|gb|ELK28398.1| Inactive rhomboid protein 1 [Myotis davidii]
Length = 492
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/222 (24%), Positives = 91/222 (40%), Gaps = 52/222 (23%)
Query: 115 QGWRLITCIWLHAG-----------VIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG 163
Q +RL ++LHAG ++H L ++ + + LE+ G+ R+ +YLLSG
Sbjct: 278 QFYRLWLSLFLHAGQVTPDGPRRVGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSG 337
Query: 164 FGG------------------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLA 199
G A + LF + +L A L+ ++
Sbjct: 338 ITGNLASAIFLPYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFT 397
Query: 200 VGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIV 259
G+LP +DNFAHI GF++G L F L FG + ++ Q V +Q V +
Sbjct: 398 FGLLPWIDNFAHISGFISGLFLSFAFLPYISFGRFDLYRKRCQIIV------FQAVFLGL 451
Query: 260 ALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
L+++ + + C WC +L+C+P + C
Sbjct: 452 LAGLVVLFYFYPV-----------RCEWCEFLTCIPFTDKFC 482
>gi|85858972|ref|YP_461174.1| rhomboid family protein [Syntrophus aciditrophicus SB]
gi|85722063|gb|ABC77006.1| rhomboid family protein [Syntrophus aciditrophicus SB]
Length = 289
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 85/190 (44%), Gaps = 29/190 (15%)
Query: 80 RLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSL 139
R SF PL L PS+ +L LGA + + W LI+ +LH G++H+ NM +L
Sbjct: 77 RTSFNPLT---LLSPSNHSLFFLGATGTIPIDQYGRWWTLISASFLHGGILHIFFNMAAL 133
Query: 140 VFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVII----- 194
+G + ++GF R +Y ++G G +LL + + +A+L L+ I
Sbjct: 134 SQLGTFVFHEYGFFRFLIIYTITGIAG--FLLSYAVGIPFTIGASASLCGLIGAILFYGK 191
Query: 195 -------------AINLAVG------ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE 235
A VG ++P ++N+AH GG AG L GF+L +
Sbjct: 192 SRGGFYGETIYRQATGWVVGLVLFGLLVPGINNWAHGGGLAAGILTGFLLGYEDKSAENS 251
Query: 236 RHQLPAQARV 245
H++ A V
Sbjct: 252 LHRILGMACV 261
>gi|329938622|ref|ZP_08288018.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
gi|329302113|gb|EGG46005.1| integral membrane protein [Streptomyces griseoaurantiacus M045]
Length = 303
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 23/148 (15%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA--Y 168
V E Q +RL+T ++LH G H++ NMLSL ++G LE+ G R +YL+SG G+
Sbjct: 135 VAEGQYYRLLTAMFLHGGYAHIIFNMLSLWWLGAPLEKALGRARFLALYLVSGLAGSALS 194
Query: 169 YLLF---------------LFNAVSLLV-LLAAALLTLVVIIAINLAVGI-LPHVDNFAH 211
YLL LF A ++LV L + ++ ++ INL + + AH
Sbjct: 195 YLLAAANQPSLGASGAIFGLFGATAVLVRRLNYDMRPVIALLVINLVLTFGWSGIAWEAH 254
Query: 212 IGGFMAGFLLGFVLLLRPQFGWAERHQL 239
IGG +AG ++G+ ++ P+ ER L
Sbjct: 255 IGGLVAGVMIGYAMVHAPR----ERRAL 278
>gi|335030555|ref|ZP_08524043.1| peptidase, S54 family [Streptococcus infantis SK1076]
gi|334265846|gb|EGL84337.1| peptidase, S54 family [Streptococcus infantis SK1076]
Length = 224
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 95 SSSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S++TL + GA+ + Q WRL + ++H G+ H NMLSL F+G ++EQ FG
Sbjct: 36 SAATLYQFGAIYPPAIKAMPEQIWRLFSATFVHIGLQHFFVNMLSLYFLGRQMEQIFGSK 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAVS 178
+ F+YLLSG G + L+F NA++
Sbjct: 96 QFFFIYLLSGMMGNLFVLVFSPNAIT 121
>gi|452975048|gb|EME74867.1| rhomboid protease YggP [Bacillus sonorensis L12]
Length = 512
Score = 58.2 bits (139), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 83/164 (50%), Gaps = 23/164 (14%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
++ TL + GA E + ++ + WR +T I LH G+IHL+ N +L+ +G E+ FG R
Sbjct: 207 NTETLIRFGAKE-NSLILAGEWWRFVTPIILHIGLIHLMFNTFALLSVGAAAERVFGSFR 265
Query: 155 VGFVYLLSG-FGGAYYLLF-----------LFNAVSLLVLLA-----AALLT----LVVI 193
+Y+ +G FG LF +F + L+ LA A L T ++V+
Sbjct: 266 FLIIYITAGVFGSIGSFLFSPYPSAGASGAIFGCLGALLFLAFSNRKAFLKTIGTNIMVM 325
Query: 194 IAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
I +NL +G + ++DN HIGG + G L + L + A+R
Sbjct: 326 IILNLGLGFAVSNIDNAGHIGGLVGGLLSAMAVGLPEKKRLAQR 369
>gi|167760294|ref|ZP_02432421.1| hypothetical protein CLOSCI_02667 [Clostridium scindens ATCC 35704]
gi|336421421|ref|ZP_08601579.1| hypothetical protein HMPREF0993_00956 [Lachnospiraceae bacterium
5_1_57FAA]
gi|167662177|gb|EDS06307.1| peptidase, S54 family [Clostridium scindens ATCC 35704]
gi|336000700|gb|EGN30847.1| hypothetical protein HMPREF0993_00956 [Lachnospiraceae bacterium
5_1_57FAA]
Length = 204
Score = 57.8 bits (138), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 33/168 (19%)
Query: 81 LSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLV 140
LSF+ E+ LF + + GA+ + + + +R+ T ++LH G HL NM++LV
Sbjct: 25 LSFQGATEDGLF------MLEHGAMYVPFITEQGEYYRMFTSMFLHFGFEHLFNNMITLV 78
Query: 141 FIGIRLEQQFGFVRVGFVYLLSGFGG-----------AYYLLFLFNAVSLLVLLAAALLT 189
IG LE + G +R +Y+LSG GG A Y + + ++ ++ A L
Sbjct: 79 LIGWNLEVEIGSIRFLVIYILSGLGGNILSSWWDIRLADYAIAAGASGAIFGIIGALLYV 138
Query: 190 ---------------LVVIIAINLAVGILP-HVDNFAHIGGFMAGFLL 221
+V +I I L G VDN AHIGG GFLL
Sbjct: 139 AIRNRGRIGDISGRGIVFMIFITLYYGYSSGGVDNMAHIGGLTTGFLL 186
>gi|428216600|ref|YP_007101065.1| Peptidase S54, rhomboid domain-containing protein [Pseudanabaena
sp. PCC 7367]
gi|427988382|gb|AFY68637.1| Peptidase S54, rhomboid domain protein [Pseudanabaena sp. PCC 7367]
Length = 530
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 92 FGPSSS--TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
FG S+ TL +LGAL+ V H+ + WRL+ ++LH G IHL NM+ L F+G +E
Sbjct: 351 FGGSTDLGTLYQLGALDPIAVRHQGEWWRLVNAMFLHYGYIHLFMNMIGLYFLGGFVETS 410
Query: 150 FGFVRVGFVYLLSGFG 165
G+ R VYL SG G
Sbjct: 411 LGWWRYLLVYLFSGIG 426
>gi|401409155|ref|XP_003884026.1| Rhomboid-6, isoform A, related [Neospora caninum Liverpool]
gi|325118443|emb|CBZ53994.1| Rhomboid-6, isoform A, related [Neospora caninum Liverpool]
Length = 646
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/155 (25%), Positives = 73/155 (47%), Gaps = 24/155 (15%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P++ L+ LG LE + + + +RL T +++H G +H+L N+ + I +E +GF
Sbjct: 324 PNARILRHLGGLETNYIREYSETFRLFTSMYMHGGWMHILINLSCQIQILWIIEPDWGFW 383
Query: 154 RVGFVYLLSGFGGAYY-------LLFLFNAVSLLVLLAA-----------------ALLT 189
R ++ L G G + + ++ S+ LL A L+
Sbjct: 384 RTTLLFFLGGISGNLLSAVADPCSITVGSSGSMYALLGALIPYCVEYWKSIPRPGCILVF 443
Query: 190 LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
++V++ I + G+ DN+AH+GG + G L GF
Sbjct: 444 MIVVVIIGILTGMAGFTDNYAHMGGALGGILWGFA 478
>gi|317500904|ref|ZP_07959115.1| rhomboid protease GluP [Lachnospiraceae bacterium 8_1_57FAA]
gi|331089196|ref|ZP_08338098.1| hypothetical protein HMPREF1025_01681 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336439355|ref|ZP_08618969.1| hypothetical protein HMPREF0990_01363 [Lachnospiraceae bacterium
1_1_57FAA]
gi|316897702|gb|EFV19762.1| rhomboid protease GluP [Lachnospiraceae bacterium 8_1_57FAA]
gi|330405748|gb|EGG85277.1| hypothetical protein HMPREF1025_01681 [Lachnospiraceae bacterium
3_1_46FAA]
gi|336016163|gb|EGN45955.1| hypothetical protein HMPREF0990_01363 [Lachnospiraceae bacterium
1_1_57FAA]
Length = 200
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 77/157 (49%), Gaps = 32/157 (20%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ + + +R+ TC++LH G+ HL+ NM+ L +G LE + G +R +Y LS
Sbjct: 40 GAMYEPFITEGQEYYRIFTCMFLHFGITHLMNNMVMLGALGWNLELEIGKLRFIIIYFLS 99
Query: 163 GFGGAYYLLFLFNAVS------------LLVLLAAALLTLVV----------------II 194
G GG +L L A+S + L ALL +V+ ++
Sbjct: 100 GIGGN--ILSLIAAISAGESAVSAGASGAVFGLMGALLYVVIANRGRLGQLSGRGMIFMV 157
Query: 195 AINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQ 230
++L G+ VDN AHIGG + GF+ V+L RP+
Sbjct: 158 VLSLYFGLTSSGVDNMAHIGGLICGFIFA-VILYRPK 193
>gi|153815443|ref|ZP_01968111.1| hypothetical protein RUMTOR_01678 [Ruminococcus torques ATCC 27756]
gi|145847302|gb|EDK24220.1| peptidase, S54 family [Ruminococcus torques ATCC 27756]
Length = 175
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 81/166 (48%), Gaps = 32/166 (19%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
++ + + GA+ + + +R+ TC++LH G+ HL+ NM+ L +G LE + G +
Sbjct: 6 EDAAFMLQHGAMYEPFITEGQEYYRIFTCMFLHFGITHLMNNMVMLGALGWNLELEIGKL 65
Query: 154 RVGFVYLLSGFGGAYYLLFLFNAVS------------LLVLLAAALLTLVV--------- 192
R +Y LSG GG +L L A+S + L ALL +V+
Sbjct: 66 RFIIIYFLSGIGGN--ILSLIAAISAGESAVSAGASGAVFGLMGALLYVVIANRGRLGQL 123
Query: 193 -------IIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQ 230
++ ++L G+ VDN AHIGG + GF+ V+L RP+
Sbjct: 124 SGRGMIFMVVLSLYFGLTSSGVDNMAHIGGLICGFIFA-VILYRPK 168
>gi|347755936|ref|YP_004863500.1| hypothetical protein [Candidatus Chloracidobacterium thermophilum
B]
gi|347588454|gb|AEP12984.1| putative membrane protein [Candidatus Chloracidobacterium
thermophilum B]
Length = 424
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 34/152 (22%)
Query: 109 RVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-- 166
+++ + + WRL+ ++LH G+IHLLANM +L +G +LE +G R +YLLSG GG
Sbjct: 96 KLIDQGEVWRLVVPMFLHIGMIHLLANMYALWVLGPQLESLYGSARFTILYLLSGIGGFV 155
Query: 167 -AYY--------------LLFLFNAVSLLV---------LLAAAL-----LTLVVIIAIN 197
+Y+ L +F A+ + V ++ A + LTL++ + I
Sbjct: 156 ASYFFAHPESIGAGASGALFGMFGALLVFVYKYRAEIPPMVRATMQRGVWLTLIINLVIT 215
Query: 198 LAVGILPHVDNFAHIGGFMAGFLLGFVLLLRP 229
++ P + H+GG + G L + P
Sbjct: 216 FSI---PFISRSGHVGGLLTGIGLALFIPYSP 244
>gi|309799609|ref|ZP_07693834.1| rhomboid family protein [Streptococcus infantis SK1302]
gi|308116760|gb|EFO54211.1| rhomboid family protein [Streptococcus infantis SK1302]
Length = 224
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 95 SSSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S++TL + GA+ + Q WRL + ++H G+ H NMLSL F+G ++EQ FG
Sbjct: 36 SAATLYQFGAIYPPAIKAMPEQIWRLFSATFVHIGLQHFFVNMLSLYFLGRQMEQIFGSK 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAVS 178
+ F+YLLSG G + L+F NA++
Sbjct: 96 QFFFIYLLSGMMGNLFVLVFSPNAIT 121
>gi|229818522|ref|YP_002880048.1| rhomboid family protein [Beutenbergia cavernae DSM 12333]
gi|229564435|gb|ACQ78286.1| Rhomboid family protein [Beutenbergia cavernae DSM 12333]
Length = 315
Score = 57.8 bits (138), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 104 ALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG 163
A+ + + E Q +R ++ +LH G++HL NM +L +G LEQ G R ++LLS
Sbjct: 136 AMAFSAAIGEVQPYRFLSAAFLHGGLLHLAFNMYALWIVGGFLEQMLGRWRYAALFLLSA 195
Query: 164 FGGAYYLLFLFNAVS-------------LLVLLAAALLTL----------VVIIAINLAV 200
GG+ L L + +S + L AA + L +V+IAIN+ +
Sbjct: 196 IGGSVGYLLLADPLSRAWTIPVVGASGAVFGLFAAIVFVLRSTGRNASQILVLIAINVVI 255
Query: 201 G-ILPHVDNFAHIGGFMAGFLLGFVLLLRP 229
G ++P + AH+GG + G LL + P
Sbjct: 256 GFVVPGIAWQAHLGGMVTGALLAVAFVYAP 285
>gi|123446916|ref|XP_001312204.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
gi|121894043|gb|EAX99274.1| Clan S-, family S54, Rhomboid-like serine peptidase [Trichomonas
vaginalis G3]
Length = 366
Score = 57.8 bits (138), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 66/143 (46%), Gaps = 26/143 (18%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+S + K GA+ ++ +++Q WRL T ++LH IH+L N L + E+ +
Sbjct: 170 MLEPSTSIVIKYGAMSTQKIRYDYQFWRLFTYMFLHGSWIHILFNSLGQFMFCLGCEKSW 229
Query: 151 GFVRVGFVYLLSG-----------------------FG--GAYYLLFLFNAVSLLVLLAA 185
G+VR +Y LSG FG GAY L L L +
Sbjct: 230 GYVRYIAIYFLSGILGGLVSAMKSANQISVGASAGIFGIMGAYAALILLLWSQLQGMAKI 289
Query: 186 ALLTLVVIIAIN-LAVGILPHVD 207
L T ++++ I + V LPHVD
Sbjct: 290 QLTTFLIMLPIMFICVSFLPHVD 312
>gi|336053788|ref|YP_004562075.1| hypothetical protein WANG_0278 [Lactobacillus kefiranofaciens ZW3]
gi|333957165|gb|AEG39973.1| possible membrane protein [Lactobacillus kefiranofaciens ZW3]
Length = 226
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 83/157 (52%), Gaps = 25/157 (15%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
+++ L K+GA+ VV Q WRL T +LH GV+HL++N + + ++G+ +E G
Sbjct: 34 ENTNVLMKMGAMSNFAVVVGQQWWRLFTAQFLHIGVMHLVSNAVIIYYMGLYMEPLMGHW 93
Query: 154 RVGFVYLLSGFGG-----------------AYYLLFLFNAVSLLVL--LAAALLTLV--- 191
R YLL+G GG + L LF A++ + L + +++ +
Sbjct: 94 RFLATYLLAGIGGNLLSLAFGSDRGLSAGASTALFGLFGAMTAIGLRNMRNPMISYLGRQ 153
Query: 192 --VIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVL 225
V+ INLA+ + +P +D + H+GG ++GFLL ++
Sbjct: 154 AFVLALINLALDLFVPGIDIWGHLGGLISGFLLAIIM 190
>gi|317472135|ref|ZP_07931467.1| rhomboid family protein [Anaerostipes sp. 3_2_56FAA]
gi|316900539|gb|EFV22521.1| rhomboid family protein [Anaerostipes sp. 3_2_56FAA]
Length = 309
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 30/170 (17%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
L+ +S+ + GAL W + + +RL+T +LH G HL NM+ V IG RLE F
Sbjct: 141 LWSAASTEILNWGALTWMHAFKQGELYRLVTSNFLHNGFDHLFNNMIVFVLIGSRLEPIF 200
Query: 151 GFVRVGFVYLLSGFGGA-----YY-----LLFLFNAVSLLVLLAAALLTLVVI------- 193
G R +Y+ +G G+ YY ++ A + L A+L +++
Sbjct: 201 GRARYVALYMGAGLCGSIVSAVYYMNMGEMVASVGASGAIFGLIGAMLWILIKNRGYQKE 260
Query: 194 -----IAINLAVGILPH------VDNFAHIGGFMAGFLLGFVLLLRPQFG 232
+A+ +A G L H VDN AHIGG + GFLL +LL R G
Sbjct: 261 FYGGGVALMIA-GSLYHGFSTMGVDNAAHIGGCIGGFLLA-ILLYRQDRG 308
>gi|344248590|gb|EGW04694.1| Rhomboid family member 2 [Cricetulus griseus]
Length = 238
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 56/213 (26%), Positives = 92/213 (43%), Gaps = 41/213 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +R+ ++LHAG++H L +++ + I LE+ G+ R+ +++LSG G A +L
Sbjct: 35 QFYRIWLSLFLHAGIVHCLVSVVFQMTILRDLEKLAGWHRISIIFILSGITGNLASAIFL 94
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + LL A L I+ G+LP +DN A
Sbjct: 95 PYRAEVGPAGSQFGLLACLFVELFQSWQLLERPWKAFFNLSAIVLFLFICGLLPWIDNIA 154
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG +++++ A I+A +L+ G
Sbjct: 155 HIFGFLSGMLLAFAFLPYITFGTSDKYRKRA---------------LILASLLVFAGLFA 199
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
LV+ N W +L+C P + C
Sbjct: 200 SLVLWLYIYPIN--WPWIEHLTCFPFTSRFCEK 230
>gi|325912121|ref|ZP_08174519.1| peptidase, S54 family [Lactobacillus iners UPII 143-D]
gi|325476071|gb|EGC79239.1| peptidase, S54 family [Lactobacillus iners UPII 143-D]
Length = 232
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 49/216 (22%)
Query: 90 PLFGPSSSTLQKL---GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
LF ++ + KL G + VV + Q WRL T ++HAG H++ N++ + F G+ L
Sbjct: 33 ELFFDVNNDINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYL 92
Query: 147 EQQFGFVRVGFVYLLSGFG----------------GAYYLLF-LFNAVSLLVLLAA---- 185
EQ G +R +YLLSG G GA +F L +V L L
Sbjct: 93 EQFLGHIRYLTIYLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNII 152
Query: 186 -------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
A L L+ I ++ +P VD HIGG + GFLL +L G
Sbjct: 153 AIIIGRQAFLLLICNIVVDF---FMPSVDIIGHIGGTITGFLLTIIL------GSIFFKD 203
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVM 274
P++ RV + C++ ++ L+ G+V+
Sbjct: 204 APSKIRV---------LFCVIFIIYLVYCLRQGMVI 230
>gi|417886300|ref|ZP_12530447.1| peptidase, S54 family [Lactobacillus oris F0423]
gi|341593798|gb|EGS36623.1| peptidase, S54 family [Lactobacillus oris F0423]
Length = 215
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 32/163 (19%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L + GAL+ + + WRLIT +++H G HLL N ++L FIG+ +EQ FG R+
Sbjct: 32 AVLLQFGALQ-SAALQAGEWWRLITPVFVHIGFAHLLINSITLYFIGMYIEQLFGHWRLL 90
Query: 157 FVYLLSGFGG----AYYL-----------LF-LFNAVSL----------LVLLAAALLTL 190
+YL S G AY+L +F LF A + L +L+ L L
Sbjct: 91 VIYLGSAVVGNLMSAYWLPAGISAGASTGIFGLFGAFIMLGASFRENQALRMLSRQFLIL 150
Query: 191 VVI-IAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
VV+ I +L V P +D H+GGF+ GFLL + L+ P+ G
Sbjct: 151 VVLNIVTDLMV---PGIDLAGHLGGFIGGFLLAY-LVGAPRLG 189
>gi|312870529|ref|ZP_07730647.1| peptidase, S54 family [Lactobacillus oris PB013-T2-3]
gi|311093926|gb|EFQ52252.1| peptidase, S54 family [Lactobacillus oris PB013-T2-3]
Length = 215
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 57/163 (34%), Positives = 84/163 (51%), Gaps = 32/163 (19%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+ L + GAL+ + + WRLIT +++H G HLL N ++L FIG+ +EQ FG R+
Sbjct: 32 AVLLRFGALQ-SAALQAGEWWRLITPVFVHIGFAHLLINSITLYFIGMYIEQLFGHWRLL 90
Query: 157 FVYLLSGFGG----AYYL-----------LF-LFNAVSL----------LVLLAAALLTL 190
+YL S G AY+L +F LF A + L +L+ L L
Sbjct: 91 IIYLGSAVVGNLMSAYWLPAGISAGASTGIFGLFGAFIMLGASFRENQALRMLSRQFLIL 150
Query: 191 VVI-IAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
VV+ I +L V P +D H+GGF+ GFLL + L+ P+ G
Sbjct: 151 VVLNIVTDLMV---PGIDLAGHLGGFIGGFLLAY-LVGAPRLG 189
>gi|159040476|ref|YP_001539729.1| rhomboid family protein [Salinispora arenicola CNS-205]
gi|157919311|gb|ABW00739.1| Rhomboid family protein [Salinispora arenicola CNS-205]
Length = 303
Score = 57.4 bits (137), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 71/139 (51%), Gaps = 19/139 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AY 168
+ E + +RLIT ++LH GVIHLL NM +L +G LE G R +YL+SG GG A
Sbjct: 134 IAEGEWYRLITAMFLHYGVIHLLLNMYALWILGRNLEASLGPARFLALYLISGLGGNVAA 193
Query: 169 YLLFLFNAVS------LLVLLAAALLT----------LVVIIAINLAVGI-LPHVDNFAH 211
YL+ NA + + L AA + ++ I+ INL + +P + H
Sbjct: 194 YLISAPNAATAGASTAIFGLFAALFVVGRRLGRDVSQVLPILVINLVFTLTVPGISIPGH 253
Query: 212 IGGFMAGFLLGFVLLLRPQ 230
+GG + G L+ +L P+
Sbjct: 254 LGGLVLGALMAVILAYAPR 272
>gi|302837339|ref|XP_002950229.1| hypothetical protein VOLCADRAFT_90638 [Volvox carteri f.
nagariensis]
gi|300264702|gb|EFJ48897.1| hypothetical protein VOLCADRAFT_90638 [Volvox carteri f.
nagariensis]
Length = 386
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 53/217 (24%)
Query: 39 SWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSST 98
+W+ + V + FIV +Y+ L++NPL GP
Sbjct: 53 TWMYNILAVGELVYFIVGLYV-----------------------VADLQDNPLLGPGQDG 89
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
+ K+G R+++ HQ WRLIT ++ +AG IHL ANM + G L ++ V +
Sbjct: 90 ILKMGGTYTQRIINRHQYWRLITSLFHNAGAIHLTANMGMVWTFGHFLVREISPWLVAMM 149
Query: 159 YLLSGFGGAYYLLFLFN----------AVSLLVLLAAALLTLV----------------- 191
Y+ +G G L+ N ++ L AA L+
Sbjct: 150 YVTAGLSG---LMVSVNVGAQHSTAGASIPSFALAGAATAMLLYRWRRFTCHGVSAAAVA 206
Query: 192 VIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLR 228
I+A N +G P VDN + GF+ G ++ ++++
Sbjct: 207 FIVAANAFIGATPFVDNSGNTAGFVFGGVICMGVMMK 243
>gi|313235558|emb|CBY11013.1| unnamed protein product [Oikopleura dioica]
Length = 840
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 64/136 (47%), Gaps = 24/136 (17%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF---------- 164
Q +RL +++HAG++HL + + + LE+ G+ R+ +Y+LSG
Sbjct: 606 QIYRLHLSLFIHAGILHLCITLFFQMVVLRDLEKLAGWWRIASIYILSGMVGNLASAIFV 665
Query: 165 --------GGAYYLLF------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
GA Y L + LL A+L L VI G+LP VDN+A
Sbjct: 666 PYKPDVGPSGAQYGLIACLFVEFIQSWQLLDQPWHAVLKLAVIAIFLFLFGLLPWVDNYA 725
Query: 211 HIGGFMAGFLLGFVLL 226
HI GF++G LL F LL
Sbjct: 726 HIFGFISGILLSFALL 741
>gi|341819922|emb|CCC56137.1| s54 family peptidase [Weissella thailandensis fsh4-2]
Length = 225
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/161 (34%), Positives = 80/161 (49%), Gaps = 26/161 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S+ L +LGA+ VV+ Q WR+IT +LH ++HL+ NM++L ++G LEQ FG VR
Sbjct: 38 STPALYQLGAMFKPSVVYMGQWWRMITAGFLHVTLMHLVLNMITLYYVGRLLEQYFGSVR 97
Query: 155 VGFVYLLS-GFGGAYYLLF----------------LFNAVSLLVLL--------AAALLT 189
Y+ + G G L F LF + L+ LL A L
Sbjct: 98 YFIGYIAAVGLGSLNSLAFGSANAISAGASGGIFGLFGMIFLMGLLDKQGFWLAQAKTLG 157
Query: 190 LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
L VI+++ +G ++ AHIGG GFLL +LL + Q
Sbjct: 158 LFVILSLIPVIG-GSNIAISAHIGGLAGGFLLAPLLLKKGQ 197
>gi|440748391|ref|ZP_20927644.1| Rhomboid family protein [Mariniradius saccharolyticus AK6]
gi|436483215|gb|ELP39283.1| Rhomboid family protein [Mariniradius saccharolyticus AK6]
Length = 517
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 72/150 (48%), Gaps = 24/150 (16%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF---- 172
WRL++ ++LH G++HL N+ LV + +E FG ++ +Y SG G+ ++
Sbjct: 365 WRLVSSMFLHGGIMHLFLNIYGLVIAALFVEPVFGRIKYFILYFASGICGSLASIYWYEN 424
Query: 173 ------------LFNAVSLLVLLAA--------ALLTLVVIIAINLAVGILPHVDNFAHI 212
L+ AV L+L A L+ + + +NL VG+ +DN AHI
Sbjct: 425 TISVGASGAIFGLYGAVLGLLLTNAFPKDGKIGILMFIGPYVGVNLLVGLTGGIDNAAHI 484
Query: 213 GGFMAGFLLGFVLLLRPQFGWAERHQLPAQ 242
GG ++G + G +L L + + + P +
Sbjct: 485 GGLVSGAVFGIILYLTVKNSEGKSSRRPRK 514
>gi|312872929|ref|ZP_07732989.1| peptidase, S54 family [Lactobacillus iners LEAF 2062A-h1]
gi|311091451|gb|EFQ49835.1| peptidase, S54 family [Lactobacillus iners LEAF 2062A-h1]
Length = 232
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 49/216 (22%)
Query: 90 PLFGPSSSTLQKL---GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
LF ++ + KL G + VV + Q WRL T ++HAG H++ N++ + F G+ L
Sbjct: 33 ELFFDVNNDINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYL 92
Query: 147 EQQFGFVRVGFVYLLSGFG----------------GAYYLLF-LFNAVSLLVLLAA---- 185
EQ G +R +YLLSG G GA +F L +V L L
Sbjct: 93 EQFLGHIRYLTIYLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNII 152
Query: 186 -------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
A L L+ I ++ +P VD HIGG + GFLL +L G
Sbjct: 153 AIIIGRQAFLLLICNIVVDF---FMPSVDIIGHIGGTITGFLLTIIL------GSIFFKD 203
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVM 274
P++ RV + C++ ++ L+ G+V+
Sbjct: 204 APSKIRV---------LFCVIFIIYLVYCLRQGMVI 230
>gi|345007980|ref|YP_004810334.1| rhomboid family protein [Streptomyces violaceusniger Tu 4113]
gi|344034329|gb|AEM80054.1| Rhomboid family protein [Streptomyces violaceusniger Tu 4113]
Length = 294
Score = 57.4 bits (137), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 50/139 (35%), Positives = 74/139 (53%), Gaps = 19/139 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA--Y 168
V E Q WRL+T I+LH +IH+ NMLSL +IG LE G VR +Y+LSG GG+
Sbjct: 125 VAEGQWWRLVTSIFLHQQLIHIAFNMLSLWWIGGPLEAALGRVRFIVLYILSGLGGSALS 184
Query: 169 YLLFLFNAVSL-------LVLLAAALLT---------LVVIIAINLAVGIL-PHVDNFAH 211
YLL N SL +L A A+L ++ ++A+NL + AH
Sbjct: 185 YLLAAQNQPSLGASGAIFGLLGATAVLMRRLNYDMRPVIALLALNLLFTFTWSGIAWQAH 244
Query: 212 IGGFMAGFLLGFVLLLRPQ 230
+GG +AG ++ + ++ P+
Sbjct: 245 VGGLVAGTVVAYGMVHAPR 263
>gi|160878203|ref|YP_001557171.1| rhomboid family protein [Clostridium phytofermentans ISDg]
gi|160426869|gb|ABX40432.1| Rhomboid family protein [Clostridium phytofermentans ISDg]
Length = 396
Score = 57.4 bits (137), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 76/157 (48%), Gaps = 28/157 (17%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
G + W + ++ +RL+T +LHA + HL+ NML L +G LE+ G + +Y LS
Sbjct: 236 GCIFWPLIKFNNEYYRLLTYQFLHANISHLVNNMLILAIMGSTLERHVGKFKYLLIYFLS 295
Query: 163 G--------------------FGGAYYLLFLFNAVSLLVLLAAALLT------LVVIIAI 196
G G + + + A++L+V++ L +++ IA+
Sbjct: 296 GIVAGIASMSYNMWKGLFSNSIGASGAVFGVIGAIALIVVVNKGRLETIGTRQIIIFIAL 355
Query: 197 NLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQFG 232
+L G VDN AH+GG +AGF + +L+ R + G
Sbjct: 356 SLYGGFTSQGVDNAAHVGGLLAGFFIA-MLVYRKKRG 391
>gi|159900030|ref|YP_001546277.1| rhomboid family protein [Herpetosiphon aurantiacus DSM 785]
gi|159893069|gb|ABX06149.1| Rhomboid family protein [Herpetosiphon aurantiacus DSM 785]
Length = 286
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 68/140 (48%), Gaps = 28/140 (20%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAY-------- 168
WRL T LH G++H+ NM +L +G +E+ +G +R +YL++G GGA+
Sbjct: 83 WRLFTATVLHGGIVHIGFNMYALYALGPTVERFYGSLRFSVIYLIAGIGGAWASYSFGSL 142
Query: 169 -----------------YLLFLFNAVSLLVLLAAA-LLTLVVIIAINLAVGIL--PHVDN 208
+ F +A S+L A L +V AINL +G+ +DN
Sbjct: 143 TGPSIGASGAIFGLIGCLIGFFLSARSVLGDFARQNLRQMVGTAAINLIIGLSFSSVIDN 202
Query: 209 FAHIGGFMAGFLLGFVLLLR 228
+AHIGG + G +G+ L R
Sbjct: 203 YAHIGGMLMGLAVGYGLAPR 222
>gi|374297549|ref|YP_005047740.1| hypothetical protein [Clostridium clariflavum DSM 19732]
gi|359827043|gb|AEV69816.1| putative membrane protein [Clostridium clariflavum DSM 19732]
Length = 517
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 65/127 (51%), Gaps = 24/127 (18%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFN- 175
WR +T I+LHA + HL+ N LSL G +E +G + F+Y ++G G+ F+F+
Sbjct: 233 WRFLTPIFLHADLEHLIMNCLSLFVFGRIVEGMYGHKKFVFIYFMAGIMGS-IASFMFSP 291
Query: 176 -----AVSLLVLLAAALL----------------TLVVIIAINLAVG-ILPHVDNFAHIG 213
A + L ALL ++++++ INL G I P +DN+ HIG
Sbjct: 292 HSAVGASGAIFGLMGALLYFSVENPALFKKYFGNSILLMVIINLVYGFIRPGIDNYGHIG 351
Query: 214 GFMAGFL 220
G + GFL
Sbjct: 352 GLIGGFL 358
>gi|225874838|ref|YP_002756297.1| S54 (rhomboid) family peptidase [Acidobacterium capsulatum ATCC
51196]
gi|225792351|gb|ACO32441.1| peptidase, S54 (rhomboid) family [Acidobacterium capsulatum ATCC
51196]
Length = 299
Score = 57.0 bits (136), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/178 (30%), Positives = 78/178 (43%), Gaps = 42/178 (23%)
Query: 92 FGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
+ P++ L GA V+ HQ WRLIT +++H G+IHL NM L +G+ E G
Sbjct: 79 WAPTTLQLYYSGANIGPLVLAHHQWWRLITAMFVHGGIIHLGVNMWCLWNLGLLAEPLMG 138
Query: 152 FVRVGFVYLLSGFGG----------------------AYYLLFLFNAVSLLVLLAAALLT 189
V V YLL+G+ G A +F V L++LL + LL
Sbjct: 139 PVGVFAAYLLTGYAGDILSVARHPGVGGGPQGVVSVGASGAIFGLAGV-LIILLKSPLLP 197
Query: 190 L--------------VVIIAINLAVGI-----LPHVDNFAHIGGFMAGFLLGFVLLLR 228
+ ++ + L GI VDN AHIGGF++G LG ++ R
Sbjct: 198 IPKADLNKLRRSVIWFAVLNLVLDAGIDFSHFFIQVDNMAHIGGFLSGMALGLPMVPR 255
>gi|385989630|ref|YP_005907928.1| integral membrane protein [Mycobacterium tuberculosis CCDC5180]
gi|385993221|ref|YP_005911519.1| integral membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|424945902|ref|ZP_18361598.1| integral membrane protein [Mycobacterium tuberculosis NCGM2209]
gi|449062098|ref|YP_007429181.1| integral membrane protein [Mycobacterium bovis BCG str. Korea
1168P]
gi|339293175|gb|AEJ45286.1| integral membrane protein [Mycobacterium tuberculosis CCDC5079]
gi|339296823|gb|AEJ48933.1| integral membrane protein [Mycobacterium tuberculosis CCDC5180]
gi|358230417|dbj|GAA43909.1| integral membrane protein [Mycobacterium tuberculosis NCGM2209]
gi|379026212|dbj|BAL63945.1| integral membrane protein [Mycobacterium tuberculosis str. Erdman =
ATCC 35801]
gi|449030606|gb|AGE66033.1| integral membrane protein [Mycobacterium bovis BCG str. Korea
1168P]
Length = 212
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 107 WDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG 166
W V Q +RL+T +LH G +HLL NM +L +G LE G +R G +Y +S GG
Sbjct: 30 WPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGG 89
Query: 167 A--YYLLFLFNAVS------LLVLLAAALLT----------LVVIIAINLAVGIL-PHVD 207
+ YL+ N + + L A + +V +I INLA L P +
Sbjct: 90 SVLVYLIAPLNTATAGASGAVFGLFGATFMVARRLHLDVRWVVALIVINLAFTFLAPAIS 149
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
H+GG + G L+ + P+ ER L QA V + +VA V+LI
Sbjct: 150 WQGHVGGLVTGALVAATYVYAPR----ERRNL-IQATVT--------ITVLVAFVVLIGW 196
Query: 268 FTVGLVMLFRGE 279
TV L+ LF G
Sbjct: 197 RTVDLLALFGGR 208
>gi|315653611|ref|ZP_07906531.1| membrane-associated serine protease [Lactobacillus iners ATCC
55195]
gi|315488973|gb|EFU78615.1| membrane-associated serine protease [Lactobacillus iners ATCC
55195]
Length = 232
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 82/187 (43%), Gaps = 40/187 (21%)
Query: 90 PLFGPSSSTLQKL---GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
LF ++ + KL G + VV + Q WRL T ++HAG H++ N++ + F G+ L
Sbjct: 33 ELFFDVNNDINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYL 92
Query: 147 EQQFGFVRVGFVYLLSGFG----------------GAYYLLF-LFNAVSLLVLLAA---- 185
EQ G +R +YLLSG G GA +F L +V L L
Sbjct: 93 EQFLGHIRYLTIYLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNII 152
Query: 186 -------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
A L L+ I ++ +P VD HIGG + GFLL +L G
Sbjct: 153 AIIIGRQAFLLLICNIVVDF---FMPSVDIIGHIGGTITGFLLTIIL------GSIFFKD 203
Query: 239 LPAQARV 245
P++ RV
Sbjct: 204 APSKIRV 210
>gi|167748326|ref|ZP_02420453.1| hypothetical protein ANACAC_03070 [Anaerostipes caccae DSM 14662]
gi|167652318|gb|EDR96447.1| peptidase, S54 family [Anaerostipes caccae DSM 14662]
Length = 280
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 81/170 (47%), Gaps = 30/170 (17%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
L+ +S+ + GAL W + + +RL+T +LH G HL NM+ V IG RLE F
Sbjct: 112 LWSAASTEILNWGALTWMHAFKQGELYRLVTSNFLHNGFDHLFNNMIVFVLIGSRLEPIF 171
Query: 151 GFVRVGFVYLLSGFGGA-----YY-----LLFLFNAVSLLVLLAAALLTLVVI------- 193
G R +Y+ +G G+ YY ++ A + L A+L +++
Sbjct: 172 GRARYVALYMGAGLCGSIVSAVYYMNMGEMVASVGASGAIFGLIGAMLWILIKNRGYQKE 231
Query: 194 -----IAINLAVGILPH------VDNFAHIGGFMAGFLLGFVLLLRPQFG 232
+A+ +A G L H VDN AHIGG + GFLL +LL R G
Sbjct: 232 FYGGGVALMIA-GSLYHGFSTMGVDNAAHIGGCIGGFLLA-ILLYRQDRG 279
>gi|150020441|ref|YP_001305795.1| rhomboid family protein [Thermosipho melanesiensis BI429]
gi|149792962|gb|ABR30410.1| Rhomboid family protein [Thermosipho melanesiensis BI429]
Length = 223
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/181 (26%), Positives = 86/181 (47%), Gaps = 27/181 (14%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
F P+ L L ++ +V Q +R++T +++H G IHL+ NM +L F+G +E +
Sbjct: 25 FFIPNEVMLYLLFGAQYGPLVSSGQWYRIVTAMFVHGGFIHLVFNMYALYFLGRIVENVY 84
Query: 151 GFVRVGFVYLLSG-FGGAYYLLFLFNAVS----------LLVLLAAAL------------ 187
G + F Y +G G F +N+ S + VL AA
Sbjct: 85 GTDKFLFFYFSTGIIGNLATQFFYYNSFSVGASGAIFGLVGVLFAAGFRRDTPYTLKPIT 144
Query: 188 -LTLVVIIAINLAVGILP--HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+ +I +N+ +G +P +++N AH+GGF++G LG+ + + ++ W R +R
Sbjct: 145 GTAFLPMILVNIFLGFIPGSNINNAAHLGGFLSGMALGYFIPIY-EYSWNIRKLWKILSR 203
Query: 245 V 245
V
Sbjct: 204 V 204
>gi|421453280|ref|ZP_15902636.1| Integral membrane protein (Rhomboid family) [Streptococcus
salivarius K12]
gi|400181589|gb|EJO15856.1| Integral membrane protein (Rhomboid family) [Streptococcus
salivarius K12]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQG-WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S +L K+GA+ V + WRL+T I++H GV H L NML+L F+G EQ FG +
Sbjct: 36 SPLSLFKMGAMYGAFVQYSPLNLWRLVTPIFVHIGVEHFLFNMLTLYFMGKMAEQIFGTL 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL---------------TLV 191
R +YLL+G G A+ LLF N + SL L AA ++ +
Sbjct: 96 RFLGLYLLAGVMGNAFTLLFTPNVIAAGASTSLFGLFAAVVILGYYSHSPLLNQLGRNYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFL 220
+I INL + P V H+GG + G L
Sbjct: 156 ALIVINLIFNLFTPSVGITGHLGGLVGGAL 185
>gi|89099189|ref|ZP_01172067.1| hypothetical protein B14911_07900 [Bacillus sp. NRRL B-14911]
gi|89086035|gb|EAR65158.1| hypothetical protein B14911_07900 [Bacillus sp. NRRL B-14911]
Length = 522
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/81 (39%), Positives = 53/81 (65%), Gaps = 2/81 (2%)
Query: 96 SSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRV 155
+S L + GA +++ ++ E + WR T I LH G++HL+ N L+L ++G +E+ +G R
Sbjct: 214 TSVLIEYGA-KYNPLILEGEWWRFFTPIVLHIGLLHLIMNTLALYYLGTAVERIYGSTRF 272
Query: 156 GFVYLLSGFGGAYYLLFLFNA 176
F+Y+L+GF GA FLFN+
Sbjct: 273 LFIYILAGFMGA-LASFLFNS 292
>gi|111226097|ref|YP_716891.1| hypothetical protein FRAAL6764 [Frankia alni ACN14a]
gi|111153629|emb|CAJ65387.1| Hypothetical protein; putative membrane protein [Frankia alni
ACN14a]
Length = 252
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 74/147 (50%), Gaps = 20/147 (13%)
Query: 109 RVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR---------VG--- 156
R+ + Q +RL+T +LHAGV+H+L NM +L +G +LE G R VG
Sbjct: 83 RIAADDQYYRLLTAAFLHAGVLHILFNMYALYLLGFQLEAILGRARYLGLFVAGAVGGNT 142
Query: 157 FVYLLSGFG----GAYYLLFLFNAVSLLVL--LAAALLTLVVIIAINLAVGI-LPHVDNF 209
YLL G GA +F F A ++ L ++V++ INL + ++D +
Sbjct: 143 LSYLLGGLSTASVGASTAIFAFFAAYYVIARRLRVDSRQILVVLGINLLITFSFSNIDKW 202
Query: 210 AHIGGFMAGFLLGFV-LLLRPQFGWAE 235
H+GG AG ++G + + P+ WA+
Sbjct: 203 GHLGGLAAGVIVGLIYAYVPPRRAWAQ 229
>gi|323694355|ref|ZP_08108528.1| rhomboid protease GluP [Clostridium symbiosum WAL-14673]
gi|323501595|gb|EGB17484.1| rhomboid protease GluP [Clostridium symbiosum WAL-14673]
Length = 209
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 29/166 (17%)
Query: 93 GPSSST--LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
G S +T + K GA+ ++ + +RL+T +++H G+ HL+ NML L +G LE+
Sbjct: 29 GSSLNTGFMVKRGAMYAPLILQYGEYYRLLTSVFMHFGIGHLINNMLVLFVLGDNLERAL 88
Query: 151 GFVRVGFVYLLSGFGG-----------AYYLL------FLFNAVSLLVLLAA-------- 185
G V+ YLL G G YY++ +F V LV A
Sbjct: 89 GKVKYLIFYLLCGIGANIISLAVNMGRGYYVVSAGASGAIFGVVGGLVYAVAVNRGRLED 148
Query: 186 -ALLTLVVIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRP 229
+ L++++A+ L G VDN AH+GG + G LG + +P
Sbjct: 149 LSTQQLMILVAVTLYHGFTSTGVDNVAHVGGLLIGIFLGMIFYRKP 194
>gi|336114379|ref|YP_004569146.1| rhomboid family protein [Bacillus coagulans 2-6]
gi|335367809|gb|AEH53760.1| Rhomboid family protein [Bacillus coagulans 2-6]
Length = 355
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
++ L + GA +++ ++ E Q WRLI +++H G++HL N LSL +IG +E+ +G R
Sbjct: 171 NTQNLIRFGA-KYNPLIMEGQYWRLIMPVFIHIGIMHLFMNSLSLYYIGPLVERIYGKAR 229
Query: 155 VGFVYLLSGFGG 166
+YL +GF G
Sbjct: 230 FALIYLFAGFTG 241
>gi|322392577|ref|ZP_08066037.1| rhomboid family protein [Streptococcus peroris ATCC 700780]
gi|321144569|gb|EFX39970.1| rhomboid family protein [Streptococcus peroris ATCC 700780]
Length = 224
Score = 57.0 bits (136), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 52/86 (60%), Gaps = 2/86 (2%)
Query: 95 SSSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S++TL + GA+ + Q WRL + ++H G+ H NMLSL F+G ++EQ FG
Sbjct: 36 SAATLYQFGAVYPPAIKAMPEQIWRLFSATFVHIGLEHFFINMLSLYFLGRQMEQIFGSK 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAVS 178
+ F+YLLSG G + L+F NA++
Sbjct: 96 QFFFIYLLSGMMGNLFVLVFSPNAIT 121
>gi|325912656|ref|ZP_08175039.1| peptidase, S54 family [Lactobacillus iners UPII 60-B]
gi|325478077|gb|EGC81206.1| peptidase, S54 family [Lactobacillus iners UPII 60-B]
Length = 232
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 94/216 (43%), Gaps = 49/216 (22%)
Query: 90 PLFGPSSSTLQKL---GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
LF ++ + KL G + VV + Q WRL T ++HAG H++ N++ + F G+ L
Sbjct: 33 ELFFDVNNDINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFL 92
Query: 147 EQQFGFVRVGFVYLLSGFG----------------GAYYLLF-LFNAVSLLVLLAA---- 185
EQ G +R +YLLSG G GA +F L +V L L
Sbjct: 93 EQFLGHIRYLTIYLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNII 152
Query: 186 -------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
A L L+ I ++ +P VD HIGG + GFLL +L G
Sbjct: 153 AIIIGRQAFLLLICNIVVDF---FMPSVDIIGHIGGTITGFLLTIIL------GSIFFKD 203
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVM 274
P++ RV + C++ ++ L+ G+V+
Sbjct: 204 APSKIRV---------LFCVIFIIYLVYCLRQGMVI 230
>gi|82540667|ref|XP_724634.1| hypothetical protein [Plasmodium yoelii yoelii 17XNL]
gi|23479343|gb|EAA16199.1| Arabidopsis thaliana F6D8.20 [Plasmodium yoelii yoelii]
Length = 659
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/196 (21%), Positives = 83/196 (42%), Gaps = 52/196 (26%)
Query: 100 QKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVY 159
+LG L + + + + +RL ++LH G++H++ N++ + I +E +GF+R F++
Sbjct: 344 NQLGGLNTNYIRNYGEIYRLFWSMYLHGGLMHIIFNVICQIQILWMIEPDWGFLRTLFLF 403
Query: 160 LLSGFGG----------------------------AYYLLFLFNAVSLLVLLAAALLTLV 191
+SG G AYY+ + + ++ ++
Sbjct: 404 FISGITGNLLSAVCDPCGVTIGSSGSLYGLIGALFAYYVEYW----KTIPRPCCVIIFMI 459
Query: 192 VIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV----------------LLLRPQFGW-- 233
+++ + +G+ + DN+AHIGG + G L GF +L P F W
Sbjct: 460 LVVIFGIFIGMFGYTDNYAHIGGCLGGILYGFATITTVSSADKCTLGERMLTSPPFSWFL 519
Query: 234 --AERHQLPAQARVKS 247
A + + +AR K
Sbjct: 520 SNATKQLIEEKAREKK 535
>gi|126308402|ref|XP_001368925.1| PREDICTED: rhomboid family member 2-like isoform 1 [Monodelphis
domestica]
Length = 827
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 89/211 (42%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG-------- 166
Q +RL ++LHAG+ H L ++L + I LE+ G+ R+ +++LSG G
Sbjct: 624 QFYRLWLSLFLHAGLGHCLVSVLFQMTILRDLEKLAGWHRIAIIFILSGITGNLASTIFL 683
Query: 167 ----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
A + L + LL A L L I+ G+LP +DN A
Sbjct: 684 PYRAEVGPAGSQFGLLACLFVELIQSWQLLENPWKAFLNLSGIVFFLFICGLLPWIDNIA 743
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
HI GF++G LL F L FG ++++ + + +V+LV+ G
Sbjct: 744 HIFGFLSGLLLSFAFLPYITFGTGDKYR--------------KRAMILVSLVIF-AGLFA 788
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
LV+ N W YL+C P + C
Sbjct: 789 SLVIWLYVYPIN--WPWIEYLTCFPFTSRFC 817
>gi|331701529|ref|YP_004398488.1| peptidase S54, rhomboid domain-containing protein [Lactobacillus
buchneri NRRL B-30929]
gi|329128872|gb|AEB73425.1| Peptidase S54, rhomboid domain protein [Lactobacillus buchneri NRRL
B-30929]
Length = 220
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 96/204 (47%), Gaps = 42/204 (20%)
Query: 87 KENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
ENP+ TL + GA +++ ++ + WRLIT +++H G H+L N ++L FIG +
Sbjct: 31 TENPV------TLVEFGA-KYNPLIRAGEYWRLITPMFIHIGFTHILMNGITLYFIGQYV 83
Query: 147 EQQFGFVRVGFVYLLSGF--------------GGAYYLLF-LFNAVSLL-------VLLA 184
EQ FG R ++ +SG GA +F LF A +L +
Sbjct: 84 EQLFGHWRFAVIFFVSGIMGNLGSFAFTDSLSAGASTAIFGLFGAFMMLGESFSKNPAIV 143
Query: 185 AALLTLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
+ T ++ I +N+ I + +D H+GG + GFL+ +V G+++ Q
Sbjct: 144 SMAKTFLLFIILNIGTDIFVSGIDIAGHLGGLVGGFLVAYV----TGVGFSKTSQ---TK 196
Query: 244 RVKSRHNPYQYVLCIVALVLLIVG 267
R+ S +L ++A VL +G
Sbjct: 197 RIIS-----AIMLVVIAFVLFTIG 215
>gi|168186765|ref|ZP_02621400.1| conserved membrane protein [Clostridium botulinum C str. Eklund]
gi|169295367|gb|EDS77500.1| conserved membrane protein [Clostridium botulinum C str. Eklund]
Length = 202
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/148 (32%), Positives = 77/148 (52%), Gaps = 24/148 (16%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIR 145
L EN L L LGA E + +V Q +RLITC++LH G++HL NM +L IG
Sbjct: 41 LSENIL-DSDIRVLLFLGANE-NTLVSSGQYYRLITCMFLHGGLVHLALNMYALEAIGPI 98
Query: 146 LEQQFGFVRVGFVYLLSGF---------------GGAYYLLFLFNAVSLL------VLLA 184
+E+ +G ++ +YL+ G G + + L A+ +L V+
Sbjct: 99 VERIYGKMKYIIIYLVGGLISSLSSYVFSTGVSIGASGAIFALLGAMFVLTIKMRDVVGK 158
Query: 185 AALLTLVVIIAINLAVGI-LPHVDNFAH 211
A + +V +I IN+ +G+ +P++DNFAH
Sbjct: 159 AVIKNIVSVIGINIFIGLAIPNIDNFAH 186
>gi|418027820|ref|ZP_12666426.1| Serine endopeptidase [Streptococcus thermophilus CNCM I-1630]
gi|354689564|gb|EHE89549.1| Serine endopeptidase [Streptococcus thermophilus CNCM I-1630]
Length = 179
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 58/176 (32%), Positives = 84/176 (47%), Gaps = 35/176 (19%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FGGAYYLLFLFN 175
WRLIT I++H GV H L NML+L F+G EQ FG +R +YLL+G G A+ L F N
Sbjct: 14 WRLITPIFVHIGVEHFLFNMLTLYFMGRMAEQIFGTLRFLGLYLLAGVMGNAFTLFFTPN 73
Query: 176 AV------SLLVLLAAALL---------------TLVVIIAINLAVGIL-PHVDNFAHIG 213
+ SL L AA ++ + +I INL + P V H+G
Sbjct: 74 VIAAGASTSLFGLFAAIVILGYYSHSPLLNQLGRNYLALIVINLIFNLFTPSVGITGHLG 133
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
G + G L L A + ++R+ S+ + L V L+L+++GFT
Sbjct: 134 GLVGGALAAIFL--------ANK----VESRLFSKGWRFTSFLTYVTLLLIVLGFT 177
>gi|350416907|ref|XP_003491162.1| PREDICTED: inactive rhomboid protein 1-like, partial [Bombus
impatiens]
Length = 888
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 94/213 (44%), Gaps = 40/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AYYLLF 172
Q +RL T ++LHAGV+HL ++ F+ LE+ G +R+ +Y + G A +
Sbjct: 681 QFYRLFTTMFLHAGVLHLSITLMVQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 740
Query: 173 LFNAVSLLVLLAAALLTLVVIIAIN----------------------LAVGILPHVDNFA 210
+ A ALL +++ ++ L +G+LP VDN+A
Sbjct: 741 PYRAEVGPAGAHFALLATLIVEVLHCWPMLKHPRRVLSKLIFVLLGLLILGMLPWVDNYA 800
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ GF+ GFL + L+ FG +R + + L + L+L++V FT+
Sbjct: 801 HLFGFIFGFLAAYALMPFISFGHYDRRR--------------KIWLIWICLILIVVLFTL 846
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L + + C C +C+P ++ C +
Sbjct: 847 LLALFYNVPVYE--CEVCKLFNCIPFTRDFCAS 877
>gi|427392549|ref|ZP_18886554.1| hypothetical protein HMPREF9698_00360 [Alloiococcus otitis ATCC
51267]
gi|425731229|gb|EKU94048.1| hypothetical protein HMPREF9698_00360 [Alloiococcus otitis ATCC
51267]
Length = 228
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 88/198 (44%), Gaps = 50/198 (25%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
++ L + GA +++ +Q WRLIT ++LH G+ H+L N+L + ++G LE FG +
Sbjct: 39 NTEVLIQYGAKFNFAIIYFNQWWRLITPMFLHIGLAHILFNLLIVYYLGSNLEYFFGHFK 98
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVV---------------------- 192
+YLL G G + F FN +S+ + A+ L +
Sbjct: 99 YALLYLLGGIMGNIF-SFAFN-ISISAGASTAIFGLFMSTIALSRIYPNRIQIQNIASQY 156
Query: 193 --IIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRH 249
+I +N+ +GIL +DN H+GG + G+L A + H
Sbjct: 157 GLLIGLNIFIGILSTGIDNMGHLGGLVGGYL--------------------ATYMITKTH 196
Query: 250 NP---YQYVLCIVALVLL 264
NP +Y L +A+ LL
Sbjct: 197 NPGSQLKYTLIYIAIALL 214
>gi|392553138|ref|ZP_10300275.1| rhomboid-like protein [Pseudoalteromonas spongiae UST010723-006]
Length = 360
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/155 (28%), Positives = 67/155 (43%), Gaps = 33/155 (21%)
Query: 104 ALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG 163
AL V + + W L+TC++LH V+HL+ NM L IG LE G + YL+ G
Sbjct: 183 ALRPADVNNGQEIWTLLTCVFLHGSVMHLVGNMYFLYIIGDNLEDALGHKKYLMYYLICG 242
Query: 164 FG---------------------------GAYYLLFLFNAVSLLVLLAAALLTLVVIIAI 196
G G Y + F +++ + ++ L+ V AI
Sbjct: 243 IGASLFSLVMSQDPNIPSVGASGAIAGLFGMYLMWFRHASLTFMFVIYQKKLSAVWFFAI 302
Query: 197 NLAVGIL------PHVDNFAHIGGFMAGFLLGFVL 225
+A+ I VD AHIGGF+ G ++G+ L
Sbjct: 303 WIAINIFGLIVLQDGVDYGAHIGGFVVGLVIGYFL 337
>gi|257064883|ref|YP_003144555.1| membrane protein [Slackia heliotrinireducens DSM 20476]
gi|256792536|gb|ACV23206.1| uncharacterized membrane protein [Slackia heliotrinireducens DSM
20476]
Length = 267
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 81/191 (42%), Gaps = 42/191 (21%)
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
TL G L ++ + Q + LIT ++LH G++HLL NM+++ +IG +E FG VR
Sbjct: 35 TLYNAGVLTTSSLL-DGQYYTLITSMFLHGGLMHLLCNMITMYYIGTVIEDVFGPVRFLI 93
Query: 158 VYLLSGFGGAYY--------------------LLFLFNAVSLLVLL-------------A 184
+Y LSG G L LF A L++ +
Sbjct: 94 IYFLSGIAGGLTSMAVMIAAGENGGVVGASGALFGLFGAYGYLLVREHRKPVVFMRPTSS 153
Query: 185 AALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+ L + +N+ +G+ P + AHIGG + G L P + E ++ Q
Sbjct: 154 SDLKGFFGFLVLNIIIGLTPGIAMEAHIGGMICGLLASI-----PMY---ELMRVAVQRE 205
Query: 245 VKSRHNPYQYV 255
+ + H P Y+
Sbjct: 206 IDAGHIPAPYI 216
>gi|170017498|ref|YP_001728417.1| small hydrophobic molecule transporter protein, putative
[Leuconostoc citreum KM20]
gi|414597489|ref|ZP_11447055.1| Membrane-associated serine protease [Leuconostoc citreum LBAE E16]
gi|169804355|gb|ACA82973.1| Small hydrophobic molecule transporter protein, putative
[Leuconostoc citreum KM20]
gi|390481770|emb|CCF29116.1| Membrane-associated serine protease [Leuconostoc citreum LBAE E16]
Length = 229
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 28/154 (18%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L +GA + H WRL+T ++LHAG++H++ NML+L F+G E+ FG R +
Sbjct: 43 LVSVGAKWGPDIAHNQAYWRLLTPVFLHAGIMHIVTNMLTLWFVGPIAERAFGSWRFLML 102
Query: 159 YLLSGFGGAYYLLFL------FNAVSLLVLLAAALL-----------------TLVVIIA 195
Y G G + L A S L + A L+ T ++ +
Sbjct: 103 YAFGGIVGNIFSYLLSPLAISVGASSALFAMFAGLILYGVRYRDNPTIRAQGATFLLFVV 162
Query: 196 INLAVGIL-PHVDNFAHIGGFMAGF----LLGFV 224
+NL G+L P +D + HIGG + G +LGFV
Sbjct: 163 LNLFSGLLAPTIDLWGHIGGLIGGMMSTVMLGFV 196
>gi|145347053|ref|XP_001417993.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578221|gb|ABO96286.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 268
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 81/182 (44%), Gaps = 30/182 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S + LGA +R+ Q WRL T I+LH G+ HL+ NM SL IG +E FG +
Sbjct: 69 SGQAITALGAKVNERIA-AGQLWRLATPIFLHGGLPHLMVNMYSLNSIGPLMEATFGREQ 127
Query: 155 VGFVYLLSGFGGAY--YLLFLFNAV---SLLVLLAAALLT-------------------L 190
VY +G G Y Y N+V + LA AL L
Sbjct: 128 FLAVYFGAGVAGNYASYRFCASNSVGASGAVFGLAGALAVYLQRHKRYLGERADMQLQQL 187
Query: 191 VVIIAINLAVGILP-HVDNFAHIGGFMAG----FLLGFVLLLRPQFGWAERHQLPAQARV 245
+A+N+ G+ +DN+ H GG + G FL G L++ G+ R +L + ++
Sbjct: 188 GTALAVNMGFGLTSRRIDNWGHAGGLVGGAALAFLTGPNLVMETDGGYGLRRKLVNKPKL 247
Query: 246 KS 247
+S
Sbjct: 248 QS 249
>gi|29347217|ref|NP_810720.1| hypothetical protein BT_1807 [Bacteroides thetaiotaomicron
VPI-5482]
gi|29339116|gb|AAO76914.1| conserved protein, with rhomboid family domain [Bacteroides
thetaiotaomicron VPI-5482]
Length = 586
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 24/120 (20%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFL--- 173
WR +TC ++H G HLL NM + ++IGI LE G R+ YLL+G A + L++
Sbjct: 204 WRAVTCNFVHIGAFHLLMNMYAFIYIGIWLEHLIGTRRMFVSYLLTGLCSAVFSLYMHAE 263
Query: 174 ------------FNAVSLLVLL---------AAALLTLVVIIAINLAVGILPHVDNFAHI 212
+ L LL A L ++++ + NL GI VDN AHI
Sbjct: 264 TISTGASGSIFGLYGIFLAFLLFHRIERSQRKALLTSILIFVGYNLIYGIRAGVDNAAHI 323
>gi|383125162|ref|ZP_09945818.1| hypothetical protein BSIG_4372 [Bacteroides sp. 1_1_6]
gi|251838549|gb|EES66635.1| hypothetical protein BSIG_4372 [Bacteroides sp. 1_1_6]
Length = 586
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 56/120 (46%), Gaps = 24/120 (20%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFL--- 173
WR +TC ++H G HLL NM + ++IGI LE G R+ YLL+G A + L++
Sbjct: 204 WRAVTCNFVHIGAFHLLMNMYAFIYIGIWLEHLIGTRRMFVSYLLTGLCSAVFSLYMHAE 263
Query: 174 ------------FNAVSLLVLL---------AAALLTLVVIIAINLAVGILPHVDNFAHI 212
+ L LL A L ++++ + NL GI VDN AHI
Sbjct: 264 TISAGASGSIFGLYGIFLAFLLFHRIERSQRKALLTSILIFVGYNLIYGIRAGVDNAAHI 323
>gi|212224193|ref|YP_002307429.1| integral membrane protein [Thermococcus onnurineus NA1]
gi|212009150|gb|ACJ16532.1| integral membrane protein [Thermococcus onnurineus NA1]
Length = 202
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 23/160 (14%)
Query: 83 FEP-LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVF 141
FE L NP+ S L ++G +W+ V W+L T +++H G++H++ NM L+
Sbjct: 27 FEAILSGNPI-DISIEVLARIG--QWNYAVLNGAWWQLFTAMFVHVGILHIVFNMYFLLM 83
Query: 142 IGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF--------------LFNAVSLLVLLAAAL 187
+G +LE+ FG + F YL +G G LF LF V +L++++ L
Sbjct: 84 LGSQLERLFGGRVLVFTYLAAGLVGNLVTLFLLPPNSISAGASGALFGIVGVLIMVSGIL 143
Query: 188 LTLVVIIAIN-----LAVGILPHVDNFAHIGGFMAGFLLG 222
+ + +N L + P V+ +AH+GG + G LLG
Sbjct: 144 GGNIQSVFVNAFILFLINSMFPGVNAYAHLGGLITGILLG 183
>gi|323486504|ref|ZP_08091827.1| rhomboid protease GluP [Clostridium symbiosum WAL-14163]
gi|355629057|ref|ZP_09050194.1| hypothetical protein HMPREF1020_04273 [Clostridium sp. 7_3_54FAA]
gi|323400207|gb|EGA92582.1| rhomboid protease GluP [Clostridium symbiosum WAL-14163]
gi|354819380|gb|EHF03825.1| hypothetical protein HMPREF1020_04273 [Clostridium sp. 7_3_54FAA]
Length = 209
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 78/166 (46%), Gaps = 29/166 (17%)
Query: 93 GPSSST--LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
G S +T + K GA+ ++ + +RL+T +++H G+ HL+ NML L +G LE+
Sbjct: 29 GSSLNTGFMVKRGAMYAPLILQYGEYYRLLTSVFMHFGIGHLINNMLVLFVLGDNLERAL 88
Query: 151 GFVRVGFVYLLSGFGG-----------AYYLL------FLFNAVSLLVLLAA-------- 185
G V+ YLL G G YY++ +F V LV A
Sbjct: 89 GKVKYLIFYLLCGIGANIISLAVNMGRGYYVVSAGASGAIFGVVGGLVYAVAVNRGRLED 148
Query: 186 -ALLTLVVIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRP 229
+ L++++A+ L G VDN AH+GG + G LG + +P
Sbjct: 149 LSTQQLMILVAVTLYHGFTSTGVDNAAHVGGLLIGIFLGMIFYRKP 194
>gi|322515950|ref|ZP_08068891.1| rhomboid family protein [Streptococcus vestibularis ATCC 49124]
gi|322125624|gb|EFX96954.1| rhomboid family protein [Streptococcus vestibularis ATCC 49124]
Length = 224
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 75/156 (48%), Gaps = 24/156 (15%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEHQG-WRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
N S +L K+GA+ V + WRL+T I++H GV H L NML+L F+G E
Sbjct: 30 NSFQATSPLSLFKMGAMYGTFVQYNPLDLWRLVTPIFVHIGVEHFLFNMLTLYFMGRMAE 89
Query: 148 QQFGFVRVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL------------ 188
Q FG +R +YLL+G G A+ LLF N + SL L AA ++
Sbjct: 90 QIFGTLRFLGLYLLAGVMGNAFTLLFTPNVIAAGASTSLFGLFAAIVILGYYSHSPLLNQ 149
Query: 189 ---TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFL 220
+ +I INL + P V H+GG + G L
Sbjct: 150 LGRNYLALIVINLIFNLFTPSVGITGHLGGLVGGAL 185
>gi|309810248|ref|ZP_07704093.1| peptidase, S54 family [Lactobacillus iners SPIN 2503V10-D]
gi|312874222|ref|ZP_07734256.1| peptidase, S54 family [Lactobacillus iners LEAF 2052A-d]
gi|308169520|gb|EFO71568.1| peptidase, S54 family [Lactobacillus iners SPIN 2503V10-D]
gi|311090292|gb|EFQ48702.1| peptidase, S54 family [Lactobacillus iners LEAF 2052A-d]
Length = 232
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 49/216 (22%)
Query: 90 PLFGPSSSTLQKL---GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
LF ++ + KL G + VV + Q WRL T ++HAG H++ N++ + F G+ L
Sbjct: 33 ELFFDVNNDINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHVICNIVMIYFFGMYL 92
Query: 147 EQQFGFVRVGFVYLLSGFG----------------GAYYLLF-LFNAVSLLVLLAA---- 185
EQ G +R +YLLSG G GA +F L +V L L
Sbjct: 93 EQFLGHIRYLTIYLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNII 152
Query: 186 -------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
A L L+ I ++ +P VD HIGG + GFLL +L G
Sbjct: 153 AIIIGRQAFLLLICNIVVDF---FMPSVDIIGHIGGTITGFLLTIIL------GSIFFKD 203
Query: 239 LPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVM 274
P++ R+ + C++ ++ L+ G+V+
Sbjct: 204 APSKIRI---------LFCVIFIIYLVYCLRQGMVI 230
>gi|266621088|ref|ZP_06114023.1| rhomboid protease GluP [Clostridium hathewayi DSM 13479]
gi|288867244|gb|EFC99542.1| rhomboid protease GluP [Clostridium hathewayi DSM 13479]
Length = 206
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 78/172 (45%), Gaps = 43/172 (25%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
++S + GA+ V+ + +RLIT +++H G+ H++ NML L +G LE+ G +
Sbjct: 34 ENTSFMVAHGAMYAPLVIERGEYYRLITSVFMHFGISHIMNNMLILFILGDNLERALGHI 93
Query: 154 RVGFVYLLSGFGGAYYLLFLFNAVSLLV-----------------------LLAAALLT- 189
+ F YL+ G G N VS++V LL A ++
Sbjct: 94 KYLFFYLICGVGA--------NIVSMIVNLGEYRNVVSAGASGAIFGVIGGLLYAVIINR 145
Query: 190 ----------LVVIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQ 230
LVV+I +L G VDN AHI G + G ++G +L +P+
Sbjct: 146 GRLEDLSTRQLVVMIVCSLYFGFTSTGVDNAAHIAGLLIGIVMGILLYRKPR 197
>gi|228478048|ref|ZP_04062659.1| membrane-associated serine protease [Streptococcus salivarius
SK126]
gi|228250228|gb|EEK09481.1| membrane-associated serine protease [Streptococcus salivarius
SK126]
Length = 224
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQG-WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S +L K+GA+ V + WRL+T I++H GV H L NML+L F+G EQ FG +
Sbjct: 36 SPLSLFKMGAMYGAFVQYSPLNLWRLVTPIFVHIGVEHFLFNMLALYFMGKMAEQIFGTL 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL---------------TLV 191
R +YLL+G G A+ LLF N + SL L AA ++ +
Sbjct: 96 RFLGLYLLAGVMGNAFTLLFTPNVIAAGASTSLFGLFAAVVILGYYSHSPLLNQLGRNYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFL 220
+I INL + P V H+GG + G L
Sbjct: 156 ALIVINLIFNLFTPSVGITGHLGGLVGGAL 185
>gi|222099054|ref|YP_002533622.1| Rhomboid family protein precursor [Thermotoga neapolitana DSM 4359]
gi|221571444|gb|ACM22256.1| Rhomboid family protein precursor [Thermotoga neapolitana DSM 4359]
Length = 236
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 82/168 (48%), Gaps = 29/168 (17%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FGGAYYLLFLFN 175
+RLIT +++H G++H+L N +L + G+ +E +G + F Y +G G +F +
Sbjct: 56 FRLITALFVHGGILHILFNSYALYYFGLIVEDIYGSEKFLFSYFFTGVVGNIATHIFYHD 115
Query: 176 AVS----------LLVLLAAAL-------------LTLVVIIAINLAVGILP--HVDNFA 210
+S + VL AA ++L+ II IN+ G LP +++N A
Sbjct: 116 TISVGASGAIFGLIGVLFAAGFRKDTPFFMKPVTGVSLLPIILINVVYGFLPGTNINNAA 175
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCI 258
H+GGF++G LLG+ ++P F W R A A + YV I
Sbjct: 176 HLGGFLSGMLLGYT--MKP-FSWKRRALWKAIAILTVSLVVLSYVFLI 220
>gi|125623059|ref|YP_001031542.1| rhomboid-related protein 1 [Lactococcus lactis subsp. cremoris
MG1363]
gi|389853384|ref|YP_006355628.1| membrane-associated serine protease [Lactococcus lactis subsp.
cremoris NZ9000]
gi|124491867|emb|CAL96788.1| Rhomboid-related protein 1 [Lactococcus lactis subsp. cremoris
MG1363]
gi|300069806|gb|ADJ59206.1| membrane-associated serine protease [Lactococcus lactis subsp.
cremoris NZ9000]
Length = 230
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 60/176 (34%), Positives = 86/176 (48%), Gaps = 30/176 (17%)
Query: 95 SSSTLQKLGALEWDRVVHE-HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+ L K GA+ +V + Q WRL+T ++H G H+L N+ +L FIG ++E FG++
Sbjct: 40 SAFNLFKSGAILGQVMVFDPSQMWRLLTANFIHIGWAHVLLNVATLFFIGRQIENVFGWL 99
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAAL---------------LTLV 191
R +YLLSG FG A L V SL L AA +
Sbjct: 100 RFTLIYLLSGIFGNAMVFLLTPQVVSAGASTSLFGLFAAVVGLAYFTKHPFLQQIGRMFT 159
Query: 192 VIIAINLAVGI--LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
V+I NL + + L +V +AHIGG + G LL ++L P+ A +P Q RV
Sbjct: 160 VLIVANLVMNLFSLGNVSIWAHIGGAIGGLLLS--VILPPK---AFVPSIPKQYRV 210
>gi|167520161|ref|XP_001744420.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777506|gb|EDQ91123.1| predicted protein [Monosiga brevicollis MX1]
Length = 217
Score = 56.6 bits (135), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 79/186 (42%), Gaps = 41/186 (22%)
Query: 142 IGIRLEQQFGFVRVGFVYLLSGFGG-------------AYYL-----------LFLFNAV 177
+ I +E+ G++R+ F+Y LSG GG YL + LF +
Sbjct: 43 VAIDIEKLAGWLRMFFIYSLSGLGGWLTGALFTPYQVCVCYLGNREGMCGGMFVELFQSW 102
Query: 178 SLLVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERH 237
LL + L I + A G LP++DN++H+GGF G L V L FG
Sbjct: 103 PLLARPWREVFKLTFIALVAFAFGFLPYLDNWSHLGGFTFGVLSSIVFLPYITFG----- 157
Query: 238 QLPAQARVKSRHNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
+ + +C+ +V+L+ TV L + F CSWCHYL+C+ +
Sbjct: 158 ------KWDAARKRTLIFICLPGIVVLM---TVLLSLFF---TDTVDCSWCHYLNCINFT 205
Query: 298 KWKCGN 303
C +
Sbjct: 206 DNFCED 211
>gi|312871798|ref|ZP_07731886.1| peptidase, S54 family [Lactobacillus iners LEAF 3008A-a]
gi|312875588|ref|ZP_07735589.1| peptidase, S54 family [Lactobacillus iners LEAF 2053A-b]
gi|311088842|gb|EFQ47285.1| peptidase, S54 family [Lactobacillus iners LEAF 2053A-b]
gi|311092740|gb|EFQ51096.1| peptidase, S54 family [Lactobacillus iners LEAF 3008A-a]
Length = 232
Score = 56.6 bits (135), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 82/187 (43%), Gaps = 40/187 (21%)
Query: 90 PLFGPSSSTLQKL---GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
LF ++ + KL G + VV + Q WRL T ++HAG H++ N++ + F G+ L
Sbjct: 33 ELFFDVNNDINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFL 92
Query: 147 EQQFGFVRVGFVYLLSGFG----------------GAYYLLF-LFNAVSLLVLLAA---- 185
EQ G +R +YLLSG G GA +F L +V L L
Sbjct: 93 EQFLGHIRYLTIYLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNII 152
Query: 186 -------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
A L L+ I ++ +P VD HIGG + GFLL +L G
Sbjct: 153 AIIIGRQAFLLLICNIVVDF---FMPSVDIIGHIGGTITGFLLTIIL------GSIFFKD 203
Query: 239 LPAQARV 245
P++ RV
Sbjct: 204 APSKIRV 210
>gi|340502586|gb|EGR29263.1| rhomboid family protein, putative [Ichthyophthirius multifiliis]
Length = 305
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 75/171 (43%), Gaps = 37/171 (21%)
Query: 87 KENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
K+ L L + GA ++ ++Q WRL T ++LH IH+L N +S + +
Sbjct: 96 KQGQLLEIRIDVLDEFGANNAQKIQQKYQLWRLFTAMFLHLNFIHILFNSVSAFILVSVM 155
Query: 147 EQQFGFVRVGFVYLLSGFGGAYY--------------------LLFLFNAVSLLVL---- 182
E +G + V +Y+LSG GG + +L LF VS +VL
Sbjct: 156 EYTYGTLYVIIIYILSGIGGNLFTDMFSSVIIISAGASTSLMGMLALF--VSYMVLNWKS 213
Query: 183 ---------LAAALLTLVVIIAINLAVGILPH--VDNFAHIGGFMAGFLLG 222
+ + T+++I L+ G VDNF H+GGF+ G L G
Sbjct: 214 LEFTGQLRCMFVCITTIIIIWVFLLSSGFSTKSGVDNFGHLGGFITGLLAG 264
>gi|403727958|ref|ZP_10947871.1| rhomboid family protein [Gordonia rhizosphera NBRC 16068]
gi|403203710|dbj|GAB92202.1| rhomboid family protein [Gordonia rhizosphera NBRC 16068]
Length = 254
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/155 (32%), Positives = 76/155 (49%), Gaps = 20/155 (12%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + + WRL+T +LH V H+ NMLSL +G LE G R VYL + GG+ +
Sbjct: 69 VADGEYWRLLTAGFLHFSVTHIAVNMLSLYILGRDLEIAIGIPRYLGVYLTALLGGSAAV 128
Query: 171 LF-----------------LFNAVSLLVLLAAALLTLVV-IIAINLAVGI-LPHVDNFAH 211
+ L AV ++V+ A A T V+ II +NL + + +P + FAH
Sbjct: 129 MVLGADNGVNAGASGAIYGLMGAVLVVVIKARASPTPVITIIVLNLVLSVTIPGISLFAH 188
Query: 212 IGGFMAGFLLGFVLLLRPQFGWA-ERHQLPAQARV 245
+GG + G ++ PQ+ A ER A +RV
Sbjct: 189 VGGLVFGAAATAGIIFGPQWVLAPERRTAAAASRV 223
>gi|387784951|ref|YP_006071034.1| hypothetical protein SALIVA_1904 [Streptococcus salivarius JIM8777]
gi|338745833|emb|CCB96199.1| conserved hypothetical, predicted membrane protein (TSM6)
[Streptococcus salivarius JIM8777]
Length = 224
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQG-WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S +L K+GA+ V + WRL+T I++H GV H L NML+L F+G EQ FG +
Sbjct: 36 SPLSLFKMGAMYGAFVQYSPLNLWRLVTPIFVHIGVEHFLFNMLALYFMGKMAEQIFGTL 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL---------------TLV 191
R +YLL+G G A+ LLF N + SL L AA ++ +
Sbjct: 96 RFLGLYLLAGVMGNAFTLLFTPNVIAAGASTSLFGLFAAVVILGYYSHSPLLNQLGRNYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFL 220
+I INL + P V H+GG + G L
Sbjct: 156 ALIVINLIFNLFTPSVGITGHLGGLVGGAL 185
>gi|421876784|ref|ZP_16308338.1| Membrane-associated serine protease [Leuconostoc citreum LBAE C10]
gi|372557462|emb|CCF24458.1| Membrane-associated serine protease [Leuconostoc citreum LBAE C10]
Length = 229
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 73/154 (47%), Gaps = 28/154 (18%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L +GA + H WRL+T ++LHAG++H++ NML+L F+G E+ FG R +
Sbjct: 43 LVAVGAKWGPDIAHNQAYWRLLTPVFLHAGIMHIVTNMLTLWFVGPIAERAFGSWRFLML 102
Query: 159 YLLSGFGGAYYLLFL------FNAVSLLVLLAAALL-----------------TLVVIIA 195
Y G G + L A S L + A L+ T ++ +
Sbjct: 103 YAFGGIVGNIFSYLLSPLAISVGASSALFAMFAGLILYGVRYRDNPTIRAQGATFLLFVV 162
Query: 196 INLAVGIL-PHVDNFAHIGGFMAGF----LLGFV 224
+NL G+L P +D + HIGG + G +LGFV
Sbjct: 163 LNLFSGLLAPTIDLWGHIGGLIGGMMSTVMLGFV 196
>gi|352518163|ref|YP_004887480.1| rhomboid family protein [Tetragenococcus halophilus NBRC 12172]
gi|348602270|dbj|BAK95316.1| rhomboid family protein [Tetragenococcus halophilus NBRC 12172]
Length = 228
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 42/68 (61%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
++ GA+ VV+ Q WR IT I++H G++H N + L F+G RLE +G +R F+
Sbjct: 37 IESQGAMFGPFVVYYSQYWRFITPIFIHYGLMHFAVNSIVLYFMGQRLEAMYGHMRYFFI 96
Query: 159 YLLSGFGG 166
YLLSG G
Sbjct: 97 YLLSGAAG 104
>gi|259500554|ref|ZP_05743456.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
gi|302191244|ref|ZP_07267498.1| membrane-associated serine protease [Lactobacillus iners AB-1]
gi|259167938|gb|EEW52433.1| conserved hypothetical protein [Lactobacillus iners DSM 13335]
Length = 232
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 82/187 (43%), Gaps = 40/187 (21%)
Query: 90 PLFGPSSSTLQKL---GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
LF ++ + KL G + VV + Q WRL T ++HAG H++ N++ + F G+ L
Sbjct: 33 ELFFDVNNDINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMFL 92
Query: 147 EQQFGFVRVGFVYLLSGFG----------------GAYYLLF-LFNAVSLLVLLAA---- 185
EQ G +R +YLLSG G GA +F L +V L L
Sbjct: 93 EQFLGHIRYLTIYLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNII 152
Query: 186 -------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
A L L+ I ++ +P VD HIGG + GFLL +L G
Sbjct: 153 AIIIGRQAFLLLICNIVVDF---FMPSVDIIGHIGGTITGFLLTIIL------GSIFFKD 203
Query: 239 LPAQARV 245
P++ RV
Sbjct: 204 APSKIRV 210
>gi|430376422|ref|ZP_19430825.1| rhomboid-like protein [Moraxella macacae 0408225]
gi|429541653|gb|ELA09681.1| rhomboid-like protein [Moraxella macacae 0408225]
Length = 265
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/173 (32%), Positives = 84/173 (48%), Gaps = 47/173 (27%)
Query: 95 SSSTLQKLGALEWDR----VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
SS T+Q L L+W + ++ +RLIT + LH G++HL+ NM +L + G EQ
Sbjct: 49 SSPTVQDL--LKWGANFLPLTMGNEPFRLITSLVLHIGLLHLMFNMYALYYFGQVAEQMI 106
Query: 151 GFVRVGFVYLLSGFGGAYYLLFLFNAVSLLV--------------------------LLA 184
G + + +++LSG GG LL F A+ L+ LL
Sbjct: 107 GSINLLILFVLSGIGGN--LLNNFLALQTLLNNESINRGQIGVSAGASGGIMGIGAALLM 164
Query: 185 AALL------------TLVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFV 224
ALL +L++++AINL+ G L +DN HIGG + G +LGFV
Sbjct: 165 TALLRTPINQIGLNFRSLLLVMAINLSYGFLVSGIDNAGHIGGALTGAMLGFV 217
>gi|392597473|gb|EIW86795.1| rhomboid-domain-containing protein, partial [Coniophora puteana
RWD-64-598 SS2]
Length = 338
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 97/223 (43%), Gaps = 45/223 (20%)
Query: 106 EWDR----VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
+W R V+ + + IT I++HAG IH++ NM++ + + ++E++ G Y
Sbjct: 123 QWFRQVVMVMGQSMNDKFITPIFIHAGFIHIILNMIAQLTVSAQIEREMGSAGFLLTYFA 182
Query: 162 SG-FG---------------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAI 196
+G FG GA +F AV+ + L A L + + +
Sbjct: 183 AGIFGNVLGGNFSLVGAPSVGASGAIFGCVAVTWVDLFAHWRYQYRPGRKLAFMSIELVF 242
Query: 197 NLAVGILP-HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYV 255
+A+G +P H AH+GG G L+G L P +H KS ++ V
Sbjct: 243 GIALGYIPSHRSISAHLGGLCMGLLVGTALY--PVISPTRKH--------KSIMWGFRIV 292
Query: 256 LCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSK 298
+A++L +V L+ F + CS C YLSC+PTS
Sbjct: 293 TIPLAIILFVV-----LIRNFYTSDPYAACSGCRYLSCIPTSS 330
>gi|453362588|dbj|GAC81512.1| hypothetical protein GM1_036_00120 [Gordonia malaquae NBRC 108250]
Length = 234
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 86/181 (47%), Gaps = 26/181 (14%)
Query: 113 EHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF 172
+ Q WRL+T +LH V HL NM SL IG LE+ G R +YL+S GG+ ++
Sbjct: 59 DDQYWRLLTSGFLHQSVPHLAINMFSLYIIGADLERALGRGRYLAIYLVSLLGGSAAVMA 118
Query: 173 LFNAVSLLVLLAAALL------------------TLVVIIAINLAVGI-LPHVDNFAHIG 213
+ V+ + A+ T++ +IAIN+ + + +P + F H+G
Sbjct: 119 FQSGVTATAGASGAIYGLMGALLILLLRVKAPVQTVLGVIAINIVISVTIPGISLFGHLG 178
Query: 214 GFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQ-YVLCIVALVLLIVGFTVGL 272
G + G V++ W LP + R ++ + Y L +A++ +++G ++G
Sbjct: 179 GLVFGAAAAGVVV------WLPARLLPPERRTQAAVSRIGWYGLAALAVIAVVIGTSLGA 232
Query: 273 V 273
V
Sbjct: 233 V 233
>gi|408419938|ref|YP_006761352.1| peptidase S54, rhomboid [Desulfobacula toluolica Tol2]
gi|405107151|emb|CCK80648.1| peptidase S54, rhomboid [Desulfobacula toluolica Tol2]
Length = 247
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 50/166 (30%), Positives = 79/166 (47%), Gaps = 28/166 (16%)
Query: 86 LKENPLF--GPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIG 143
L NP + PS L LGA +V W LIT WLH G++H+L NML+L +
Sbjct: 44 LTLNPFYVLTPSMDVLNFLGASGRLPIVKFEAWWSLITANWLHGGLLHILFNMLALKTVA 103
Query: 144 IRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLV--------LLAAALL------- 188
+ ++G R+ +Y L+G G +LL V L + L+ AAL
Sbjct: 104 PLVMYEYGVCRMFTIYTLTGIAG--FLLSYIGNVYLTIGASSGLCGLIGAALYFGKSRGG 161
Query: 189 ---------TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVL 225
T ++++ L ++P+++N+ H GG ++G LG+VL
Sbjct: 162 QWGQLVYKQTSGWVLSLVLIGFLMPNINNWGHAGGLISGVFLGWVL 207
>gi|309805213|ref|ZP_07699265.1| peptidase, S54 family [Lactobacillus iners LactinV 09V1-c]
gi|308165447|gb|EFO67678.1| peptidase, S54 family [Lactobacillus iners LactinV 09V1-c]
Length = 232
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/167 (31%), Positives = 76/167 (45%), Gaps = 34/167 (20%)
Query: 90 PLFGPSSSTLQKL---GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
LF ++ + KL G + VV + Q WRL T ++HAG H++ N++ + F G+ L
Sbjct: 33 ELFFDVNNDINKLLDFGCMNNIAVVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYL 92
Query: 147 EQQFGFVRVGFVYLLSGFG----------------GAYYLLF-LFNAVSLLVLLAA---- 185
EQ G +R +YLLSG G GA +F L +V L L
Sbjct: 93 EQFLGHIRYLTIYLLSGVGGNLLSFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNII 152
Query: 186 -------ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVL 225
A L L+ I ++ +P VD HIGG + GFLL +L
Sbjct: 153 AIIIGRQAFLLLICNIVVDF---FMPSVDIIGHIGGTITGFLLTIIL 196
>gi|336435773|ref|ZP_08615487.1| hypothetical protein HMPREF0988_01072 [Lachnospiraceae bacterium
1_4_56FAA]
gi|336000268|gb|EGN30420.1| hypothetical protein HMPREF0988_01072 [Lachnospiraceae bacterium
1_4_56FAA]
Length = 207
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 77/164 (46%), Gaps = 29/164 (17%)
Query: 91 LFGPSSSTLQKL--GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
L G T+ L GA+ V+ + +RL+T ++LH G+ HLL NM+ L +G LE
Sbjct: 26 LIGKDGDTMFLLEHGAMYAPYVLEGKEDYRLVTSMFLHFGMQHLLNNMVMLGALGWNLEA 85
Query: 149 QFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVL----------LAAALL---------- 188
G +R +Y+ SG GG LFL + V+ L ALL
Sbjct: 86 VTGKIRFILIYMFSGIGGNLLSLFLNRNSGVYVVSAGASGAVFGLMGALLFAAIRNRGHV 145
Query: 189 ------TLVVIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVL 225
L ++A++L G+ VDN AHIGG + GFLL VL
Sbjct: 146 GRVSRRGLFFMVALSLYFGLSSSGVDNAAHIGGLICGFLLEAVL 189
>gi|341886049|gb|EGT41984.1| CBN-ROM-4 protein [Caenorhabditis brenneri]
Length = 1199
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 38/137 (27%), Positives = 65/137 (47%), Gaps = 24/137 (17%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG------- 166
+Q +RL T +++HAGV HL+ ++ +I +E G R+ +Y LSG GG
Sbjct: 916 NQFYRLFTSLFVHAGVFHLVLTVIFQWYIMRDMEFMIGSTRMAILYFLSGIGGNLAAAIF 975
Query: 167 -----------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNF 209
A ++ L++ +L + A+ +I A L VG++P VDN+
Sbjct: 976 VPYNPAVGPSSAQCGIIAANIVDLYHHRRILDNFSTAIRQQWLISAFVLLVGLIPWVDNW 1035
Query: 210 AHIGGFMAGFLLGFVLL 226
AH+ G + G L ++
Sbjct: 1036 AHLFGSIVGLLTTIIIF 1052
>gi|67608816|ref|XP_666907.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54657985|gb|EAL36682.1| hypothetical protein Chro.60098 [Cryptosporidium hominis]
Length = 985
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 56/231 (24%)
Query: 36 QWTSWLIPM----FVV-----ANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPL 86
++ W+ P+ FVV A V VF ++ N N W+ G G + E
Sbjct: 550 KFRKWVNPIHGRIFVVLTTSFALVGVFFQSLIYNRL--NKWDNGN------CGGVYVESF 601
Query: 87 KENPLFGPSSSTLQKLGALEWDRVVHE-HQG--WRLITCIWLHAGVIHLLANMLSLVFIG 143
N + GP S TL LG L VV+E QG R+ +W+H G IH+ N++S +G
Sbjct: 602 SMNSMLGPCSKTLSALGGL----VVNELRQGEMIRMFWAMWMHTGFIHIGFNVISQAQLG 657
Query: 144 IRLEQQFGFVRVGFVYLLSGFGGAYYL---------------LFLFNAVSL--------- 179
+E +G +R ++ LSG GG + LF A S+
Sbjct: 658 YMIEPDWGILRFFLLFFLSGVGGNLAVAVISPCSLTVGSSGGLFGITAASIPYTFENWNN 717
Query: 180 ----LVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLL 226
+ + +L +L++ + ++ G+ + +AHIGGF+ G L F +
Sbjct: 718 LPAPMFMFIFSLFSLIIGMILSF-TGV---TNPWAHIGGFVVGILYTFATM 764
>gi|66475270|ref|XP_627451.1| conserved protein with 6 transmembrane domain [Cryptosporidium
parvum Iowa II]
gi|46228919|gb|EAK89768.1| conserved protein with 6 transmembrane domain [Cryptosporidium
parvum Iowa II]
Length = 990
Score = 56.2 bits (134), Expect = 2e-05, Method: Composition-based stats.
Identities = 62/231 (26%), Positives = 100/231 (43%), Gaps = 56/231 (24%)
Query: 36 QWTSWLIPM----FVV-----ANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPL 86
++ W+ P+ FVV A V VF ++ N N W+ G G + E
Sbjct: 555 KFRKWVNPIHGRIFVVLTTSFALVGVFFQSLIYNRL--NKWDNGN------CGGVYVESF 606
Query: 87 KENPLFGPSSSTLQKLGALEWDRVVHE-HQG--WRLITCIWLHAGVIHLLANMLSLVFIG 143
N + GP S TL LG L VV+E QG R+ +W+H G IH+ N++S +G
Sbjct: 607 SMNSMLGPCSKTLSALGGL----VVNELRQGEMIRMFWAMWMHTGFIHIGFNVISQAQLG 662
Query: 144 IRLEQQFGFVRVGFVYLLSGFGGAYYL---------------LFLFNAVSL--------- 179
+E +G +R ++ LSG GG + LF A S+
Sbjct: 663 YMIEPDWGILRFFLLFFLSGVGGNLAVAVISPCSLTVGSSGGLFGITAASIPYTFENWNN 722
Query: 180 ----LVLLAAALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLL 226
+ + +L +L++ + ++ G+ + +AHIGGF+ G L F +
Sbjct: 723 LPAPMFMFIFSLFSLIIGMILSF-TGV---TNPWAHIGGFVVGILYTFATM 769
>gi|389576264|ref|ZP_10166292.1| putative membrane protein [Eubacterium cellulosolvens 6]
gi|389311749|gb|EIM56682.1| putative membrane protein [Eubacterium cellulosolvens 6]
Length = 215
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 29/160 (18%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
T + GA+ + ++ E + WRL T +++H G+ HL++N +SL+ IG+ LEQ G +R
Sbjct: 44 DTAIRFGAM-YRPLLMEGEWWRLFTSMFVHFGMDHLVSNTISLLLIGVSLEQHCGHIRFL 102
Query: 157 FVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIA----------------INLAV 200
+Y+L G G + L + + A A + I+ INL +
Sbjct: 103 LIYILGGLAGNGFSLLIEGGSPQQAVSAGASGAVFAILGGYIALALIWKRTGVANINLVL 162
Query: 201 GILPH-----------VDNFAHIGGFMAGFLLGFVLLLRP 229
I+ V+ AH+GG AGF LG +LL RP
Sbjct: 163 TIVAAGYMFYRSMGTGVNVEAHLGGLAAGFFLG-LLLCRP 201
>gi|291561790|emb|CBL40590.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[butyrate-producing bacterium SS3/4]
Length = 206
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 27/160 (16%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ V+ + + +RL+T +++H G+ H++ NML L IG LE+ G V+ YLL
Sbjct: 42 GAMFAPAVLEDGEYYRLLTAMFMHFGIRHIMNNMLVLFVIGDNLERALGHVKYLIFYLLC 101
Query: 163 GFGGAYYLLFLFNAVSLLVLLAAA-------------------------LLTLVVIIAIN 197
G G + + A ++ V A+ LV++I +
Sbjct: 102 GIGSNWVSMMAHTADTMTVSAGASGAIFGVVGGLLYVVTANRGQLEDLNTRQLVIMIFFS 161
Query: 198 LAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRP-QFGWAE 235
L +G VDN AH+ G + GF+L +L RP + WA+
Sbjct: 162 LYLGYTSTGVDNIAHLSGLVIGFVLAIILYHRPARDRWAD 201
>gi|160874113|ref|YP_001553429.1| rhomboid family protein [Shewanella baltica OS195]
gi|378707356|ref|YP_005272250.1| rhomboid family protein [Shewanella baltica OS678]
gi|418024255|ref|ZP_12663238.1| Peptidase S54, rhomboid domain protein [Shewanella baltica OS625]
gi|160859635|gb|ABX48169.1| Rhomboid family protein [Shewanella baltica OS195]
gi|315266345|gb|ADT93198.1| Rhomboid family protein [Shewanella baltica OS678]
gi|353536215|gb|EHC05774.1| Peptidase S54, rhomboid domain protein [Shewanella baltica OS625]
Length = 541
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/159 (28%), Positives = 74/159 (46%), Gaps = 26/159 (16%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNA 176
WRLIT ++H G+ HL N+ L F+G LE G R+ YL++G + + ++A
Sbjct: 376 WRLITSTFIHGGLAHLALNLYGLFFVGSFLEPVLGKWRLFLAYLITGILASIASICWYDA 435
Query: 177 -------------VSLLVLLAAAL-----------LTLVVIIAINLAVGILPHVDNFAHI 212
+ +LV+ A + L + I+L G+L VDN AH+
Sbjct: 436 TVSVGASGAIMGLLGILVIWAWKKIFPEDINWILSINLAFFVTISLVAGLLGGVDNAAHV 495
Query: 213 GGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNP 251
GG ++G ++G++ L Q +R +AR H+P
Sbjct: 496 GGLLSGLVVGYLSLRYAQRAQGDRG--AQRARKIEGHSP 532
>gi|441142545|ref|ZP_20962413.1| hypothetical protein SRIM_00110 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
gi|440622490|gb|ELQ85269.1| hypothetical protein SRIM_00110 [Streptomyces rimosus subsp.
rimosus ATCC 10970]
Length = 303
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/237 (26%), Positives = 103/237 (43%), Gaps = 46/237 (19%)
Query: 13 SNNNNNRGSYSSGSYYVEPGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRG 72
+ R + ++ V G+ T + + + NVAVFI + + + + E G
Sbjct: 63 DGSGTGRTAQATAPRTVAGGALTADTRLVTKILLGINVAVFIAVLAVGDGLVQDLELIGG 122
Query: 73 CVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHL 132
R LQ +G V E + +RL+T ++LH +H+
Sbjct: 123 AFTR--------------------EDLQFIG-------VAEGEWYRLLTAVFLHQAPMHI 155
Query: 133 LANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA--YYLLFLFNAVSL------LVLLA 184
+ NMLSL ++G LE FG VR +YLLSG GG+ YLL N SL LL
Sbjct: 156 IFNMLSLWWLGPPLEAAFGRVRFLALYLLSGLGGSALSYLLAAQNQPSLGASGAIFGLLG 215
Query: 185 AALLTL----------VVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
A ++ + ++++A+NL P + AH+GG + G + + ++ P+
Sbjct: 216 ATVILMRRLNYDMRPVLILLALNLVFTFAWPDIAWQAHVGGLVMGAAVTYGMVHAPR 272
>gi|417766158|ref|ZP_12414112.1| peptidase, S54 family [Leptospira interrogans serovar Bulgarica
str. Mallika]
gi|400351612|gb|EJP03831.1| peptidase, S54 family [Leptospira interrogans serovar Bulgarica
str. Mallika]
Length = 514
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|322374129|ref|ZP_08048663.1| rhomboid family protein [Streptococcus sp. C150]
gi|321277095|gb|EFX54166.1| rhomboid family protein [Streptococcus sp. C150]
Length = 224
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 62/196 (31%), Positives = 93/196 (47%), Gaps = 36/196 (18%)
Query: 98 TLQKLGALEWDRVVHEHQG-WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+L K+GA+ V + WRL+T I++H G+ H L NML+L FIG EQ FG +R
Sbjct: 39 SLFKMGAMYGVFVQYSPLDLWRLVTPIFVHIGLEHFLFNMLTLYFIGKMAEQIFGTLRFL 98
Query: 157 FVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL---------------TLVVII 194
+YLL+G G A+ L+F N + SL L AA ++ + + +I
Sbjct: 99 GLYLLAGVMGNAFTLIFTPNVIAAGASTSLFGLFAAVVILGYYSHSPLLNQLGRSYLSLI 158
Query: 195 AINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQ 253
+NL + P V H+GG + G L L A + ++R+ SR
Sbjct: 159 VVNLIFNLFTPSVGITGHLGGLVGGALAAIFL--------ANK----VESRLFSRGWRLT 206
Query: 254 YVLCIVALVLLIVGFT 269
L + L++ IVGFT
Sbjct: 207 AFLTYIILLVTIVGFT 222
>gi|197302289|ref|ZP_03167348.1| hypothetical protein RUMLAC_01016 [Ruminococcus lactaris ATCC
29176]
gi|197298720|gb|EDY33261.1| peptidase, S54 family [Ruminococcus lactaris ATCC 29176]
Length = 211
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/156 (30%), Positives = 75/156 (48%), Gaps = 29/156 (18%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ ++ + +R TC++LH G+ HLL NM+ L +G +LE G V+ +Y +S
Sbjct: 40 GAMYEPMILENQEYYRFFTCMFLHFGIQHLLNNMVMLGALGWQLEPVIGKVKYLLIYFIS 99
Query: 163 GFGGAYYLLFLFN-----------AVSLLVLLAAALLTLVV----------------IIA 195
G GG+ L F +N A + L ALL +V+ ++
Sbjct: 100 GLGGS-GLSFAWNVMHEEQSVSAGASGAIFGLMGALLYVVIANRGRLGDLSGKGMMLMVL 158
Query: 196 INLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQ 230
+ L G+ VDN AHIGG + GF+L +L + +
Sbjct: 159 LGLYCGMTSTGVDNLAHIGGLVCGFILALILYRKKK 194
>gi|417761549|ref|ZP_12409558.1| peptidase, S54 family [Leptospira interrogans str. 2002000624]
gi|417776479|ref|ZP_12424317.1| peptidase, S54 family [Leptospira interrogans str. 2002000621]
gi|418671929|ref|ZP_13233275.1| peptidase, S54 family [Leptospira interrogans str. 2002000623]
gi|409942630|gb|EKN88238.1| peptidase, S54 family [Leptospira interrogans str. 2002000624]
gi|410573846|gb|EKQ36890.1| peptidase, S54 family [Leptospira interrogans str. 2002000621]
gi|410581051|gb|EKQ48866.1| peptidase, S54 family [Leptospira interrogans str. 2002000623]
Length = 514
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE 235
L+ +V I L G+ +DN AHIGG ++G L G +L QFG +
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFGKKD 514
>gi|385680095|ref|ZP_10054023.1| membrane protein [Amycolatopsis sp. ATCC 39116]
Length = 256
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/143 (30%), Positives = 72/143 (50%), Gaps = 21/143 (14%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY 169
+ E + WRL+ +LH G IHL NML+L +G +E G VR +YL+S GGA
Sbjct: 70 IAGEDEWWRLVMSGFLHYGPIHLAVNMLALWILGRDMETLLGRVRFTVLYLVSLLGGAVA 129
Query: 170 LLFLFNAV---------SLLVLLAAALLTLVVI----------IAINLAVGI-LPHVDNF 209
++LF+ V ++ LL A L+ ++ + I +NL + + LP++
Sbjct: 130 -VYLFDGVDRGTAGASGAIYGLLGAMLVAVIRLRLNPAYAIGTIVLNLIITVSLPNISLL 188
Query: 210 AHIGGFMAGFLLGFVLLLRPQFG 232
H+GG + G L+ ++ P G
Sbjct: 189 GHLGGLVVGALVTAAMVYAPAKG 211
>gi|312862457|ref|ZP_07722700.1| peptidase, S54 family [Streptococcus vestibularis F0396]
gi|311102100|gb|EFQ60300.1| peptidase, S54 family [Streptococcus vestibularis F0396]
Length = 224
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 24/150 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQG-WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S +L K+GA+ V + WRL+T I++H GV H L NML+L F+G EQ FG +
Sbjct: 36 SPLSLFKMGAMYGAFVQYSPLNLWRLVTPIFVHIGVEHFLFNMLALYFMGKMAEQIFGTL 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL---------------TLV 191
R +YLL+G G A+ LLF N + SL L AA ++ +
Sbjct: 96 RFLGLYLLAGVMGNAFTLLFTPNVIAAGASTSLFGLFAAVVILGYYSHSPLLNQLGRNYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFL 220
+I INL + P V H+GG + G L
Sbjct: 156 ALIIINLIFNLFTPSVGITGHLGGLVGGAL 185
>gi|209877288|ref|XP_002140086.1| rhomboid family protein [Cryptosporidium muris RN66]
gi|209555692|gb|EEA05737.1| rhomboid family protein [Cryptosporidium muris RN66]
Length = 892
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 64/139 (46%), Gaps = 23/139 (16%)
Query: 40 WLIP----MFVV-----ANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENP 90
W+ P +FVV A VF+ ++ N N W C F+ EP K NP
Sbjct: 466 WINPVHGRLFVVLTTSFALTGVFLQSLVFNRL--NKWGSPNNCGGVFV-----EPFKTNP 518
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGW---RLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
+ G L LG L VV+E + RL +W+HAG IH+ N+LS +G +E
Sbjct: 519 MLGACPEALNVLGGL----VVNELRNGGVIRLFWAMWMHAGFIHIGFNVLSQAQLGYMME 574
Query: 148 QQFGFVRVGFVYLLSGFGG 166
+G R F++ LS GG
Sbjct: 575 PDWGMTRFFFLFFLSAIGG 593
>gi|433640241|ref|YP_007286000.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070008]
gi|432156789|emb|CCK54054.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070008]
Length = 249
Score = 56.2 bits (134), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 86/192 (44%), Gaps = 32/192 (16%)
Query: 107 WDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG 166
W V Q +RL+T +LH G +HLL NM +L +G LE G +R G +Y +S GG
Sbjct: 67 WPPAVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGG 126
Query: 167 A--YYLLFLFNAVS------LLVLLAAALLT----------LVVIIAINLAVGIL-PHVD 207
+ YL+ N + + L A + +V +I INLA L P +
Sbjct: 127 SVLVYLIAPLNTATAGASGAVFGLFGATFMVARRLHLDVRWVVALIVINLAFTFLAPAIS 186
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
H+GG + G L+ + P+ ER L QA V + +VA V+LI
Sbjct: 187 WQGHVGGLVTGALVAATYVYAPR----ERRNL-IQATVT--------ITVLVAFVVLIGW 233
Query: 268 FTVGLVMLFRGE 279
TV L+ L G
Sbjct: 234 RTVDLLALSGGR 245
>gi|421879273|ref|ZP_16310744.1| Membrane-associated serine protease [Leuconostoc citreum LBAE C11]
gi|390446828|emb|CCF26864.1| Membrane-associated serine protease [Leuconostoc citreum LBAE C11]
Length = 229
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 72/154 (46%), Gaps = 28/154 (18%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L +GA + H WRL+T ++LHAG++H++ NML+L F+G E FG R +
Sbjct: 43 LVAVGAKWGPDIAHNQAYWRLLTPVFLHAGIMHIVTNMLTLWFVGPIAEHAFGSWRFLML 102
Query: 159 YLLSGFGGAYYLLFL------FNAVSLLVLLAAALL-----------------TLVVIIA 195
Y G G + L A S L + A L+ T ++ +
Sbjct: 103 YAFGGIVGNIFSYLLSPLAISVGASSALFAMFAGLILYGVRYRDNPTIRAQGATFLLFVV 162
Query: 196 INLAVGIL-PHVDNFAHIGGFMAGF----LLGFV 224
+NL G+L P +D + HIGG + G +LGFV
Sbjct: 163 LNLFSGLLAPTIDLWGHIGGLIGGMMSTVMLGFV 196
>gi|182418411|ref|ZP_02949705.1| rhomboid family protein [Clostridium butyricum 5521]
gi|237666444|ref|ZP_04526429.1| rhomboid family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182377793|gb|EDT75337.1| rhomboid family protein [Clostridium butyricum 5521]
gi|237657643|gb|EEP55198.1| rhomboid family protein [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 354
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 26/134 (19%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
LGA ++ ++++ + WRLI+C +LH +H+ NM L IG ++E+ +G V+ F+YL+
Sbjct: 199 LGA-KYSPLIYDGEIWRLISCAFLHGSFLHIACNMYMLYIIGPQIERIYGKVKYIFIYLI 257
Query: 162 SGFGGAYYLLFLFNAVSLLV------------LLAAALLT-----------LVVIIAINL 198
S + L + N S+ V LLA AL+ L+ I INL
Sbjct: 258 SCITSS-TLSLIINPDSISVGASGGIFGLMGALLAFALIERKNIDREYTVGLIKTIGINL 316
Query: 199 AVG-ILPHVDNFAH 211
+G I+ ++DN AH
Sbjct: 317 VIGLIIINIDNAAH 330
>gi|347753198|ref|YP_004860763.1| Rhomboid family protein [Bacillus coagulans 36D1]
gi|347585716|gb|AEP01983.1| Rhomboid family protein [Bacillus coagulans 36D1]
Length = 377
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
++ L + GA +++ ++ E Q WRLIT +++H G +HL N LSL +IG +E+ +G R
Sbjct: 197 NTQNLIRFGA-KYNPLIMEGQYWRLITPVFIHIGFMHLFMNSLSLYYIGPLVERIYGKGR 255
Query: 155 VGFVYLLSGFGG 166
+YL +GF G
Sbjct: 256 FALIYLFAGFTG 267
>gi|430741443|ref|YP_007200572.1| hypothetical protein Sinac_0438 [Singulisphaera acidiphila DSM
18658]
gi|430013163|gb|AGA24877.1| putative membrane protein [Singulisphaera acidiphila DSM 18658]
Length = 654
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 71/159 (44%), Gaps = 27/159 (16%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
PS + GA VV + Q WRL+T ++LH G+IHL N+ L+ G +E+ FG +
Sbjct: 297 PSPRVMLDWGASFGPSVVFDRQVWRLLTSMFLHFGLIHLAMNLWCLLTTGPVVERFFGHL 356
Query: 154 RVGFVYLLSGFGGAYYLLFLF------NAVSLLVLLAAALLTLVVIIAINLAVGIL---- 203
+Y+LSG GGA LF+ A + + LL + I ++ IL
Sbjct: 357 GFAALYVLSGLGGAAASLFVHPTFICAGASGAIFGVFGGLLGFLAIRHRDVPPAILQPMR 416
Query: 204 -----------------PHVDNFAHIGGFMAGFLLGFVL 225
+D AH+GG GF++G VL
Sbjct: 417 SGTLAFLGYNVLFGLTSSTIDMAAHLGGLATGFVVGLVL 455
>gi|418710371|ref|ZP_13271142.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
gi|418725109|ref|ZP_13283785.1| peptidase, S54 family [Leptospira interrogans str. UI 12621]
gi|409961491|gb|EKO25236.1| peptidase, S54 family [Leptospira interrogans str. UI 12621]
gi|410769307|gb|EKR44549.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. UI 08368]
Length = 514
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGALSGIILF---QFG 511
>gi|384251749|gb|EIE25226.1| rhomboid-domain-containing protein [Coccomyxa subellipsoidea C-169]
Length = 278
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 66/134 (49%), Gaps = 26/134 (19%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNA 176
+RL+TC +LHAG++HL N +L IG +E G+ +Y+LSG G+ FLF+
Sbjct: 127 YRLLTCTFLHAGILHLGLNCWALYSIGPEVEGVMGYSTFAAIYVLSGLAGS-TASFLFSD 185
Query: 177 V-------SLLVLLAAA----------------LLTLVVIIAINLAVGILP--HVDNFAH 211
+ ++ LL A L + I+A+N+ +G P +DN H
Sbjct: 186 LITVGASGAIFGLLGATAGYFLRNRALQGSTQQLTYIAGIVALNIFLGASPGSMIDNSGH 245
Query: 212 IGGFMAGFLLGFVL 225
+GG G LG+++
Sbjct: 246 LGGLFTGVALGYIM 259
>gi|194466614|ref|ZP_03072601.1| Rhomboid family protein [Lactobacillus reuteri 100-23]
gi|194453650|gb|EDX42547.1| Rhomboid family protein [Lactobacillus reuteri 100-23]
Length = 219
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 88/172 (51%), Gaps = 28/172 (16%)
Query: 93 GPSSST--LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
G S++T L K+GA ++ E + WRL++ ++LH G+ HL+ N ++L++IG +E+ F
Sbjct: 30 GGSTNTVILLKMGA-RSTSLIREGEWWRLVSPVFLHVGLSHLVVNSVTLLYIGRYIEEFF 88
Query: 151 GFVRVGFVYLLSG-FG--------------GAYYLLF-LFNAVSLL-------VLLAAAL 187
G R+ +Y +S FG GA +F LF A +L +++
Sbjct: 89 GHWRMVVIYFISAIFGNLASAVFMPLTISAGASTAIFGLFGAFLMLGVCFHRNIVVRVLS 148
Query: 188 LTLVVIIAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
T ++ + IN+ + LP VD HIGG GF + F+ + P G +R +
Sbjct: 149 RTFLLFVIINIVMDFFLPGVDLVGHIGGLFGGFFIAFI-VGAPMLGTVDRLK 199
>gi|392945858|ref|ZP_10311500.1| putative membrane protein [Frankia sp. QA3]
gi|392289152|gb|EIV95176.1| putative membrane protein [Frankia sp. QA3]
Length = 341
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 20/147 (13%)
Query: 109 RVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR---------VG--- 156
R+ + Q +RL+T +LHAGV+H+L NM +L +G +LE G R VG
Sbjct: 172 RIAVDDQYYRLLTAAFLHAGVLHILFNMYALYLLGFQLEAILGRARYLGLFVAGAVGGNT 231
Query: 157 FVYLLSGFG----GAYYLLFLFNAVSLLVL--LAAALLTLVVIIAINLAVGI-LPHVDNF 209
YLL G GA +F F + ++ L +++++ INL + +D +
Sbjct: 232 LSYLLGGLSTASVGASTAIFAFFSAYYVIARRLRVDSQQILIVLGINLLITFSFSSIDKW 291
Query: 210 AHIGGFMAGFLLGFV-LLLRPQFGWAE 235
H+GG AG ++G + + P+ WA+
Sbjct: 292 GHLGGLAAGLIVGLIYAYVPPRRVWAQ 318
>gi|126651489|ref|ZP_01723693.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
gi|126591742|gb|EAZ85838.1| hypothetical protein BB14905_07394 [Bacillus sp. B14905]
Length = 207
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 29/159 (18%)
Query: 97 STLQKLGALEWDR------VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
S L +G L W+ +V + + WR+ + I+LHAG +H+ NM SL G LE+
Sbjct: 32 SLLPGVGTLLWNYGIQANFLVQKGEWWRVFSAIFLHAGFMHVFFNMFSLYLFGPELEKIA 91
Query: 151 GFVRVGFVYLLSGFGG--AYYLLF---------------LFNAVSLLVLLAAALLTLV-- 191
G R +YL+SG G A Y+ + +F A LV + ++
Sbjct: 92 GKARFITIYLVSGIVGNMATYIFYDSSYASLGASGAIFGIFGAFGALVYYTRRTMPMLRK 151
Query: 192 ----VIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLL 226
+II + + P+V+ FAH+GG + GF+LG + L
Sbjct: 152 LILPIIIISVIMTFLQPNVNVFAHLGGLVTGFILGLIYL 190
>gi|423100417|ref|ZP_17088124.1| peptidase, S54 family [Listeria innocua ATCC 33091]
gi|370793418|gb|EHN61256.1| peptidase, S54 family [Listeria innocua ATCC 33091]
Length = 518
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 37/189 (19%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+++ +++ + WR I+ I+LH+G+IHL +N + L +G E+ +G R + LL G
Sbjct: 223 KFNPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYILILLLGGIC 282
Query: 166 G-----AYYLLFLFNAVSLLVLLAAALLTLVV----------------IIAINLAVGIL- 203
G A + A + + + ALL LVV ++AINL + +
Sbjct: 283 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGTSIASLVAINLLIDVFS 342
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQ-FGWAERHQLPAQARVKSRHNPYQYVLCIVALV 262
+D HIGG + GFLL L L Q F W R Y L VA++
Sbjct: 343 TQIDIAGHIGGLVGGFLLAGALSLPKQFFHW--------------RRLAYGVSLVAVAIL 388
Query: 263 LLIVGFTVG 271
L GF G
Sbjct: 389 FLYFGFQKG 397
>gi|408411064|ref|ZP_11182247.1| Membrane-associated serine protease [Lactobacillus sp. 66c]
gi|407874727|emb|CCK84053.1| Membrane-associated serine protease [Lactobacillus sp. 66c]
Length = 224
Score = 55.8 bits (133), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+S L K+GA+ VV E Q WRL T +LH G++H+ +N + + +IG E FG
Sbjct: 32 ESTSVLLKMGAMYNPAVVVEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPIFGHW 91
Query: 154 RVGFVYLLSGFGGA 167
R +YLLSG GG+
Sbjct: 92 RFLVLYLLSGTGGS 105
>gi|268534400|ref|XP_002632331.1| C. briggsae CBR-ROM-4 protein [Caenorhabditis briggsae]
Length = 709
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 73/153 (47%), Gaps = 25/153 (16%)
Query: 112 HEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----- 166
+ +Q +RL T +++HAG+IHL ++ ++ LE G R+ +Y SG GG
Sbjct: 435 YPNQFYRLFTSLFIHAGIIHLALSVGFQWWVMRDLEFMIGSKRMAILYFCSGIGGNLASA 494
Query: 167 -------------------AYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVD 207
A ++ L++ +V + AL + +I + LA G++P +D
Sbjct: 495 IFVPFNPAVGPSSALCGVMAAVVVDLYHHRQEMVEFSCALYQQLFVICVYLAFGLIPWID 554
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLP 240
N+AH+ G + GFL ++ F AE ++P
Sbjct: 555 NWAHLFGSIFGFLATIIIFPYLDFP-AEDDKVP 586
>gi|421131221|ref|ZP_15591405.1| peptidase, S54 family [Leptospira kirschneri str. 2008720114]
gi|410357472|gb|EKP04727.1| peptidase, S54 family [Leptospira kirschneri str. 2008720114]
Length = 447
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 77/171 (45%), Gaps = 32/171 (18%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 283 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 339
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 340 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 399
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAE 235
L+ +V I L G+ +DN +HIGG + G +LG +L QFG +
Sbjct: 400 NVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFGKKD 447
>gi|417784544|ref|ZP_12432250.1| peptidase, S54 family [Leptospira interrogans str. C10069]
gi|409952361|gb|EKO06874.1| peptidase, S54 family [Leptospira interrogans str. C10069]
Length = 514
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|241895032|ref|ZP_04782328.1| S54 family peptidase [Weissella paramesenteroides ATCC 33313]
gi|241871750|gb|EER75501.1| S54 family peptidase [Weissella paramesenteroides ATCC 33313]
Length = 225
Score = 55.8 bits (133), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 56/162 (34%), Positives = 81/162 (50%), Gaps = 24/162 (14%)
Query: 93 GPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGF 152
G S+ TL LGA+ VV HQ WRLIT +LH +HL+ NM++L ++G LEQ G
Sbjct: 36 GVSTQTLYHLGAMFTPAVVMMHQWWRLITAGFLHVTFMHLILNMITLYYVGRLLEQYLGS 95
Query: 153 VRVGFVYLLS---------GFG-------GAYYLLF-LFNAVSLLVLLAAA--LLTLVVI 193
++ Y+ + FG GA +F LF + LL LL LT
Sbjct: 96 LKYFIGYITAIIIGSLNSLAFGSITAISAGASGGIFGLFGMIFLLGLLDKQGFWLTQAKT 155
Query: 194 IAINLAVGILP-----HVDNFAHIGGFMAGFLLGFVLLLRPQ 230
+ I + + ++P ++ AHIGG +GFL+ +LL R Q
Sbjct: 156 LGIFVILSLIPIFGGTNIAISAHIGGLASGFLIAPLLLRRGQ 197
>gi|396586115|ref|ZP_10486089.1| peptidase, S54 family [Actinomyces sp. ICM47]
gi|395546456|gb|EJG14095.1| peptidase, S54 family [Actinomyces sp. ICM47]
Length = 241
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 73/148 (49%), Gaps = 26/148 (17%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF---- 172
W ++T +LH G++H+L NMLSL ++G +E G+ R VYLLS GG+ ++L
Sbjct: 62 WTILTGAFLHGGLLHILFNMLSLYWVGRAIEPVLGWWRFLTVYLLSALGGSAFILAWCLI 121
Query: 173 ------------------LFNAVSLLVLLAAALLT-LVVIIAINLAVGILPH-VDNFAHI 212
LF AV +L L A T ++ ++ INL G L + AHI
Sbjct: 122 QPSELLVGTVGASGAVFGLFGAVFVLQRLGGADTTPILTLLGINLVYGFLASGISWQAHI 181
Query: 213 GGFMAGFLLGFVL--LLRPQFGWAERHQ 238
GG + G +VL L RP+ G E Q
Sbjct: 182 GGAVVGVAATWVLARLARPRAGITEAAQ 209
>gi|16800442|ref|NP_470710.1| hypothetical protein lin1374 [Listeria innocua Clip11262]
gi|422415832|ref|ZP_16492789.1| rhomboid family protein [Listeria innocua FSL J1-023]
gi|16413847|emb|CAC96605.1| lin1374 [Listeria innocua Clip11262]
gi|313623901|gb|EFR94013.1| rhomboid family protein [Listeria innocua FSL J1-023]
Length = 512
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 37/189 (19%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+++ +++ + WR I+ I+LH+G+IHL +N + L +G E+ +G R + LL G
Sbjct: 217 KFNPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYILILLLGGIC 276
Query: 166 G-----AYYLLFLFNAVSLLVLLAAALLTLVV----------------IIAINLAVGILP 204
G A + A + + + ALL LVV ++AINL + +
Sbjct: 277 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGTSIASLVAINLLIDVFS 336
Query: 205 -HVDNFAHIGGFMAGFLLGFVLLLRPQ-FGWAERHQLPAQARVKSRHNPYQYVLCIVALV 262
+D HIGG + GFLL L L Q F W R Y L VA++
Sbjct: 337 TQIDIAGHIGGLVGGFLLAGALSLPKQFFHW--------------RRLAYGVSLVAVAIL 382
Query: 263 LLIVGFTVG 271
L GF G
Sbjct: 383 FLYFGFQKG 391
>gi|260587072|ref|ZP_05852985.1| rhomboid protease GluP [Blautia hansenii DSM 20583]
gi|331082843|ref|ZP_08331965.1| hypothetical protein HMPREF0992_00889 [Lachnospiraceae bacterium
6_1_63FAA]
gi|260542562|gb|EEX23131.1| rhomboid protease GluP [Blautia hansenii DSM 20583]
gi|330400172|gb|EGG79821.1| hypothetical protein HMPREF0992_00889 [Lachnospiraceae bacterium
6_1_63FAA]
Length = 220
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 75/159 (47%), Gaps = 32/159 (20%)
Query: 95 SSSTLQKLGALEWD-----RVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
+ S+L L W V+ H+ +RLI+ ++LH G+ HL NML L+F+G LE+
Sbjct: 49 TGSSLDTYHILRWGGCYTPAVLQSHEYYRLISSMFLHFGIQHLGNNMLVLLFLGDCLERN 108
Query: 150 FGFVRVGFVYLLSGFG------------GAYYLL-----FLFNAVSLLVLLAAA------ 186
G ++ +Y L G G G Y++ +F + L+ + A
Sbjct: 109 IGKIKYLLIYFLGGIGANVLSIYLEIKNGKYFISAGASGAVFAVIGALIYIVIANRGRIE 168
Query: 187 ---LLTLVVIIAINLAVGILPH-VDNFAHIGGFMAGFLL 221
L+V+ ++L G+ VDN AH GG ++GF+L
Sbjct: 169 NFTTRQLIVMAGLSLYFGMTSTGVDNAAHFGGLISGFIL 207
>gi|421128003|ref|ZP_15588221.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
gi|421133348|ref|ZP_15593496.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410022356|gb|EKO89133.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. Andaman]
gi|410434470|gb|EKP83608.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. 2006006986]
Length = 514
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|409350266|ref|ZP_11233445.1| Membrane-associated serine protease [Lactobacillus equicursoris CIP
110162]
gi|407877534|emb|CCK85503.1| Membrane-associated serine protease [Lactobacillus equicursoris CIP
110162]
Length = 224
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 45/74 (60%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+S L K+GA+ VV E Q WRL T +LH G++H+ +N + + +IG E FG
Sbjct: 32 ESTSVLLKMGAMYNPAVVVEGQWWRLFTAQFLHIGIMHIASNAIMIYYIGQYAEPIFGHW 91
Query: 154 RVGFVYLLSGFGGA 167
R +YLLSG GG+
Sbjct: 92 RFLVLYLLSGTGGS 105
>gi|223984557|ref|ZP_03634688.1| hypothetical protein HOLDEFILI_01983 [Holdemania filiformis DSM
12042]
gi|223963485|gb|EEF67866.1| hypothetical protein HOLDEFILI_01983 [Holdemania filiformis DSM
12042]
Length = 424
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/138 (34%), Positives = 70/138 (50%), Gaps = 22/138 (15%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ----------QFGFVRVG--F 157
VV H+ WR +T ++H + HLL NM++L +G+ E+ FG + G F
Sbjct: 211 VVGAHEYWRWLTSAFVHVDLWHLLMNMMALYNMGMLCEKLMGVRNYLIILFGSILFGSAF 270
Query: 158 VYLLSG-------FGGAYYLL--FLFNAVSLLVLLAAALLT-LVVIIAINLAVGILPHVD 207
V+L SG GG Y LL FL + +L L T ++I+ INL + ++P V
Sbjct: 271 VFLGSGNVVAMGISGGLYGLLAAFLVYGIQTRILFQPQLRTQFLLILMINLMISLMPGVS 330
Query: 208 NFAHIGGFMAGFLLGFVL 225
AH GGF+ G L+ VL
Sbjct: 331 LAAHFGGFVGGLLISVVL 348
>gi|418689558|ref|ZP_13250679.1| peptidase, S54 family [Leptospira interrogans str. FPW2026]
gi|418729718|ref|ZP_13288265.1| peptidase, S54 family [Leptospira interrogans str. UI 12758]
gi|400361237|gb|EJP17204.1| peptidase, S54 family [Leptospira interrogans str. FPW2026]
gi|410775896|gb|EKR55887.1| peptidase, S54 family [Leptospira interrogans str. UI 12758]
Length = 514
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|443326975|ref|ZP_21055612.1| putative membrane protein [Xenococcus sp. PCC 7305]
gi|442793404|gb|ELS02854.1| putative membrane protein [Xenococcus sp. PCC 7305]
Length = 203
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/161 (29%), Positives = 79/161 (49%), Gaps = 33/161 (20%)
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
TL +LGAL + + + + WRLI +LH G HL++NML+L FIG +E G R
Sbjct: 37 TLYRLGALVSENI-KQGEWWRLINANFLHFGWFHLISNMLALFFIGSIVELSIGVERYLI 95
Query: 158 VYLLSGFGGAYYLLFLFN---AVSLLVLLAAA---------------------------- 186
VYLLSG G L N V ++++ A+A
Sbjct: 96 VYLLSGTGSMLTFALLANYTGQVQVVLMGASAAIMGTIGTMLTTSLADWLEYRTSLKAKR 155
Query: 187 LLTLVVIIAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVLL 226
L T++ ++ + + I+P+V ++H+ GF+ GF++ +L+
Sbjct: 156 LQTVIFVVVLQFILDNIIPNVSFYSHLFGFIIGFVVSLILM 196
>gi|116511000|ref|YP_808216.1| membrane-associated serine protease [Lactococcus lactis subsp.
cremoris SK11]
gi|385837184|ref|YP_005874814.1| GlpG protein [Lactococcus lactis subsp. cremoris A76]
gi|414073474|ref|YP_006998691.1| Intramembrane serine protease, rhomboid family [Lactococcus lactis
subsp. cremoris UC509.9]
gi|116106654|gb|ABJ71794.1| Membrane-associated serine protease [Lactococcus lactis subsp.
cremoris SK11]
gi|358748412|gb|AEU39391.1| GlpG protein [Lactococcus lactis subsp. cremoris A76]
gi|413973394|gb|AFW90858.1| Intramembrane serine protease, rhomboid family [Lactococcus lactis
subsp. cremoris UC509.9]
Length = 230
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 62/176 (35%), Positives = 86/176 (48%), Gaps = 30/176 (17%)
Query: 95 SSSTLQKLGALEWDRVVHE-HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+ L K GA+ +V + Q WRL+T ++H G H+L N+ +L FIG ++E FG++
Sbjct: 40 SAFNLFKSGAILGQVMVFDPSQMWRLLTANFIHIGWAHVLLNVATLFFIGRQIENVFGWL 99
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAA----ALLT-----------LV 191
R +YLLSG FG A L V SL L AA A T
Sbjct: 100 RFTLIYLLSGIFGNAMVFLLTPQVVSAGASTSLFGLFAAVVGLAYFTKHPFLQQIGRMFT 159
Query: 192 VIIAINLAVGI--LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
V+I NL + + L +V +AHIGG + G LL +L P+ A +P Q RV
Sbjct: 160 VLIVANLVMNLFSLGNVSIWAHIGGAIGGLLLS--AILPPK---AFVPSIPKQYRV 210
>gi|417772121|ref|ZP_12420011.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Pomona]
gi|418680537|ref|ZP_13241786.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|418703562|ref|ZP_13264446.1| peptidase, S54 family [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|418715819|ref|ZP_13275930.1| peptidase, S54 family [Leptospira interrogans str. UI 08452]
gi|421118289|ref|ZP_15578634.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|400327895|gb|EJO80135.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Kennewicki LC82-25]
gi|409946078|gb|EKN96092.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Pomona]
gi|410010137|gb|EKO68283.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
Fiocruz LV133]
gi|410766698|gb|EKR37381.1| peptidase, S54 family [Leptospira interrogans serovar Hebdomadis
str. R499]
gi|410788320|gb|EKR82042.1| peptidase, S54 family [Leptospira interrogans str. UI 08452]
gi|455668108|gb|EMF33357.1| peptidase, S54 family [Leptospira interrogans serovar Pomona str.
Fox 32256]
Length = 514
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|405968549|gb|EKC33613.1| Rhomboid family member 1 [Crassostrea gigas]
Length = 972
Score = 55.5 bits (132), Expect = 3e-05, Method: Composition-based stats.
Identities = 52/212 (24%), Positives = 96/212 (45%), Gaps = 39/212 (18%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF- 172
Q WRL + H G+IH L + + + ++E G++R+ +Y++ G GG +
Sbjct: 772 QQWWRLPLSLLYHYGIIHCLLVVGAQSLLLRQIEITIGWLRMMILYIVCGCGGLLAAVIF 831
Query: 173 ------------LFNAVSLLVLLAA-----------ALLTLVVIIAINLAVGILPHVDNF 209
LF AV LL + L+ L+ I+A+ + G LP+++ F
Sbjct: 832 NPYQPHVGATGALFGAVGLLFVELVHFWSIIRRPWLELIKLLTIMAVFIFSGTLPYLNIF 891
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFT 269
+ + G + G L LL P +RH+ A R+ V+ V++ L+I F
Sbjct: 892 SILAGLLLGMLCALGLL--PYIS-IKRHK--ALCRI---------VVVAVSIPLVITIFF 937
Query: 270 VGLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
V + +R + ++C +C +++C P ++ C
Sbjct: 938 VMFYVFYRVQL-LENCKFCKFVNCYPYTENMC 968
>gi|345851676|ref|ZP_08804644.1| hypothetical protein SZN_17977 [Streptomyces zinciresistens K42]
gi|345636882|gb|EGX58421.1| hypothetical protein SZN_17977 [Streptomyces zinciresistens K42]
Length = 295
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 79/177 (44%), Gaps = 38/177 (21%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR------------VGFV 158
V E + WRL+T ++ H V H NMLSL ++G LE G R F
Sbjct: 126 VAEGEWWRLVTSMFTHEAVWHFAFNMLSLWWLGGPLEAALGRARYLALYFCSGLAGSAFT 185
Query: 159 YLLS-------GFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGILP--HVDNF 209
YLL+ G GA + LF AV LL L + ++ ++ INL P ++
Sbjct: 186 YLLADPHTASLGASGAIFGLFGATAV-LLRRLQYDMRPIIALLVINLIFTFAPGFNISWQ 244
Query: 210 AHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIV 266
AHIGG +AG ++G+ ++ P+ ER L QY C + L ++V
Sbjct: 245 AHIGGLVAGVIIGYAMVHAPR----ERRAL------------VQYGTCALVLAAVVV 285
>gi|219849715|ref|YP_002464148.1| rhomboid family protein [Chloroflexus aggregans DSM 9485]
gi|219543974|gb|ACL25712.1| Rhomboid family protein [Chloroflexus aggregans DSM 9485]
Length = 271
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 64/212 (30%), Positives = 95/212 (44%), Gaps = 40/212 (18%)
Query: 92 FGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
F P+ S L LGA +R+ + WRL+T LHA +IH+ N +L +G E+ +G
Sbjct: 69 FQPTLSVLVVLGAKVNERIA-AGEVWRLLTATVLHANLIHIFFNGYALSVLGPETERFYG 127
Query: 152 FVRVGFVYLLSGFGG--AYYLLF-------------LFNAVSLLVLLAAALL-------- 188
VR +YLLSG GG A Y L L + + L +L
Sbjct: 128 HVRFLVLYLLSGVGGSIASYALSSAPAVGASGAIFGLIGGLGMFYYLNRQVLGQFGQDQV 187
Query: 189 -TLVVIIAINLAVGILPH--VDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+V I INL +G +DN+ H+GG ++G ++ L L P+ R P +
Sbjct: 188 RGIVAIAVINLLIGFAAQGVIDNWGHLGGLVSGVVVS--LALSPRLTIDSRFFPP----L 241
Query: 246 KSRHNPYQYVLCIVALVLLIVGFTVGLVMLFR 277
R P Q L + A FT+G+++L R
Sbjct: 242 LIRRFPRQGWLWVTA-------FTLGMMVLVR 266
>gi|150019138|ref|YP_001311392.1| rhomboid family protein [Clostridium beijerinckii NCIMB 8052]
gi|149905603|gb|ABR36436.1| Rhomboid family protein [Clostridium beijerinckii NCIMB 8052]
Length = 328
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 22/126 (17%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
+ ++++ Q WRL+TC +LH G+IH++ NM SL +G ++Q +G + +Y+ S +
Sbjct: 181 NELINQGQYWRLLTCAFLHGGLIHIVGNMYSLYILGPEIQQIYGVYKYFIIYIFSCLTSS 240
Query: 168 YYLLFL------------FNAVSLLVLLAAA---------LLTLVVIIAINLAVGI-LPH 205
F+ F + LV+ A L +L+ + +NL +G + +
Sbjct: 241 LLSYFMSPYLSVGASGGIFGLMGALVVFAIIERKRINKRYLSSLLQAMGVNLFIGFSISN 300
Query: 206 VDNFAH 211
+DNFAH
Sbjct: 301 IDNFAH 306
>gi|418679207|ref|ZP_13240471.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|418686873|ref|ZP_13248037.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
gi|421090060|ref|ZP_15550861.1| peptidase, S54 family [Leptospira kirschneri str. 200802841]
gi|400320332|gb|EJO68202.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. RM52]
gi|410001323|gb|EKO51937.1| peptidase, S54 family [Leptospira kirschneri str. 200802841]
gi|410738580|gb|EKQ83314.1| peptidase, S54 family [Leptospira kirschneri serovar Grippotyphosa
str. Moskva]
Length = 514
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN +HIGG + G +LG +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|418741786|ref|ZP_13298160.1| peptidase, S54 family [Leptospira kirschneri serovar Valbuzzi str.
200702274]
gi|410751234|gb|EKR08213.1| peptidase, S54 family [Leptospira kirschneri serovar Valbuzzi str.
200702274]
Length = 514
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN +HIGG + G +LG +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|451337929|ref|ZP_21908468.1| rhomboid family serine protease [Amycolatopsis azurea DSM 43854]
gi|449419521|gb|EMD25056.1| rhomboid family serine protease [Amycolatopsis azurea DSM 43854]
Length = 320
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/154 (29%), Positives = 72/154 (46%), Gaps = 20/154 (12%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
S L +LG L + + WR+ T +L G++H+ +N SL F+G LE G V
Sbjct: 117 SALFQLGELSNPPTLAAGEWWRIFTSGFLQYGLLHIASNAFSLWFVGRPLETALGRVPFT 176
Query: 157 FVYLLSGFGG-AYYLLFLFNAVSLLVLLAAALLTLV------------------VIIAIN 197
+Y +S GG A L+F + +V + A+ L+ VI+ +N
Sbjct: 177 ALYFVSMLGGSAANLVFTDLDAAPVVGASGAIFGLIGAYTVIVIKLRLNPSWLLVILGLN 236
Query: 198 LAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
+ + +P + AH GGF+AG L F LL P+
Sbjct: 237 VFITFQVPGISILAHAGGFVAGLLATFALLYAPE 270
>gi|444429847|ref|ZP_21225028.1| rhomboid family protein [Gordonia soli NBRC 108243]
gi|443889267|dbj|GAC66749.1| rhomboid family protein [Gordonia soli NBRC 108243]
Length = 268
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 90/191 (47%), Gaps = 31/191 (16%)
Query: 105 LEWD---RVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
L+W + + Q WRL T +LH VIH+ NML+L +G LE G R VY+
Sbjct: 74 LDWSLYKPAIADGQYWRLFTSGFLHLSVIHIAGNMLALYILGRDLELALGIPRYVAVYVT 133
Query: 162 SGFGG-AYYLLF----------------LFNAVSLLVLLAAAL--LTLVVIIAINLAVGI 202
S FGG A+ +LF L A+ L+VLL A L + ++ II +N+ + I
Sbjct: 134 SLFGGSAFVMLFESDTAVTAGASGAIYGLMGAI-LVVLLKARLSPVPVLSIIGLNIVLSI 192
Query: 203 -LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVAL 261
+P + +AHIGG + G + ++ P L +R ++ + I L
Sbjct: 193 AIPGISIWAHIGGLVFGAVATAGIVFAPGL-------LGGSSRPSAKTASIIGWVTIAVL 245
Query: 262 VLLIVGFTVGL 272
+L VG VG+
Sbjct: 246 FVLAVGICVGI 256
>gi|302531387|ref|ZP_07283729.1| predicted protein [Streptomyces sp. AA4]
gi|302440282|gb|EFL12098.1| predicted protein [Streptomyces sp. AA4]
Length = 320
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 77/165 (46%), Gaps = 21/165 (12%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIR 145
++ LF ++ ++ LG L + + WR+ T +LH G IH+ AN SL +G
Sbjct: 104 VQAKSLFDNGAARIEMLGELWTYPALGGGEWWRIFTSGFLHYGPIHIAANAFSLWMMGRA 163
Query: 146 LEQQFGFVRVGFVYLLSGFGGAYYLLFLFNAVS------------LLVLLAAALLTL--- 190
LEQ FG R +Y +S FG + +L LF+A + LL A +L L
Sbjct: 164 LEQVFGKSRFLALYFVSMFGASTAVL-LFDAPNRPSAGASGAIFGLLGSYAVIVLKLRLN 222
Query: 191 VVIIAINLAVG-----ILPHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
+ INL + +P + AH+GG + G L+ +L P+
Sbjct: 223 PTALLINLVINAYVTFTIPQISILAHVGGLVTGALVAAAILYAPE 267
>gi|418701499|ref|ZP_13262424.1| peptidase, S54 family [Leptospira interrogans serovar Bataviae str.
L1111]
gi|410759581|gb|EKR25793.1| peptidase, S54 family [Leptospira interrogans serovar Bataviae str.
L1111]
Length = 514
Score = 55.5 bits (132), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 511
>gi|399217023|emb|CCF73710.1| unnamed protein product [Babesia microti strain RI]
Length = 949
Score = 55.1 bits (131), Expect = 4e-05, Method: Composition-based stats.
Identities = 39/155 (25%), Positives = 70/155 (45%), Gaps = 26/155 (16%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P++ + LG L +++ + + +RL+ ++LH VIH++ N+ + +E +GF
Sbjct: 181 PNARIFETLGGLNSNKIRNYKEYYRLVWSMFLHGSVIHMVFNLCCQIQSLWMIEPDWGFF 240
Query: 154 RVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLV---------------------- 191
R +Y +SG G L + + V + A+ L+
Sbjct: 241 RTAGLYFVSGIFGN-LLSAILDPCGTTVGSSGAMYGLMGALIPYCIEYWKTIPRPFSILI 299
Query: 192 ---VIIAINLAVGILPHVDNFAHIGGFMAGFLLGF 223
+ I I L G+ + DN+AH+GG +AG L GF
Sbjct: 300 FNCIFIIIGLISGLAGYTDNYAHLGGCIAGILWGF 334
Score = 45.1 bits (105), Expect = 0.036, Method: Composition-based stats.
Identities = 40/154 (25%), Positives = 75/154 (48%), Gaps = 26/154 (16%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P++ + LG L +++ + + +RL+ ++LH VIH++ N+ + +E +GF
Sbjct: 666 PNARIFETLGGLNSNKIRNYKEYYRLVWSMFLHGSVIHMVFNLCCQIQSLWMIEPDWGFF 725
Query: 154 RVGFVYLLSG-FG-----------------GAYY----LLFLFNAVSLLVLLAAALLTLV 191
R +Y +SG FG GA Y L + V +L A+ + +V
Sbjct: 726 RTAGLYFVSGIFGNLLSAILDPCGTTVGSSGAMYGLMGALIPYCIVRILENDCASKVYIV 785
Query: 192 V--IIAINLAVGILPHVDNFAHIGGFMAGFLLGF 223
+ I+ NL + ++ + ++ +GGF+AG L GF
Sbjct: 786 LCDIVCGNLLIDVVIWIVDW--VGGFIAGVLWGF 817
>gi|345857374|ref|ZP_08809813.1| rhomboid family protein [Desulfosporosinus sp. OT]
gi|344329492|gb|EGW40831.1| rhomboid family protein [Desulfosporosinus sp. OT]
Length = 328
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/126 (30%), Positives = 62/126 (49%), Gaps = 22/126 (17%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
+ ++ + WRL+T I++H G+IHL N+ +L +G E+ FG + +Y+ SG GG+
Sbjct: 179 NDLIQAGEVWRLLTSIFIHIGIIHLAFNLYALRALGPLTEEFFGHPKFLMIYMFSGLGGS 238
Query: 168 YYLLFLFNAVS------LLVLLAAAL---------------LTLVVIIAINLAVGI-LPH 205
A+S + LL A L + LVV+I +N GI P
Sbjct: 239 IASYLFSPALSAGASGAIFGLLGALLYYCIKRPYLWKSGLGMNLVVVILVNFGFGISQPG 298
Query: 206 VDNFAH 211
+DN+AH
Sbjct: 299 IDNYAH 304
>gi|419707143|ref|ZP_14234640.1| Conserved hypothetical, predicted membrane protein (TMS6)
[Streptococcus salivarius PS4]
gi|383283103|gb|EIC81070.1| Conserved hypothetical, predicted membrane protein (TMS6)
[Streptococcus salivarius PS4]
Length = 224
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/196 (31%), Positives = 93/196 (47%), Gaps = 36/196 (18%)
Query: 98 TLQKLGALEWDRVVHEHQG-WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+L K+GA+ V + WRL+T I++H G+ H L NML+L FIG EQ FG +R
Sbjct: 39 SLFKMGAMYGVFVQYSPLDLWRLVTPIFVHIGLEHFLFNMLTLYFIGKMAEQIFGTLRFL 98
Query: 157 FVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL---------------TLVVII 194
+YLL+G G A+ L+F N + SL L AA ++ + + +I
Sbjct: 99 GLYLLAGVMGNAFTLIFTPNVIAAGASTSLFGLFAAVVILGYYSHSPLLNQLGRSYLSLI 158
Query: 195 AINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQ 253
+NL + P V H+GG + G L L A + ++R+ SR
Sbjct: 159 VVNLIFNLFTPSVGITGHLGGLVGGALAAIFL--------ANK----VESRLFSRGWRLT 206
Query: 254 YVLCIVALVLLIVGFT 269
L + L++ I+GFT
Sbjct: 207 AFLTYIILLVTIIGFT 222
>gi|338730738|ref|YP_004660130.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
gi|335365089|gb|AEH51034.1| Rhomboid family protein [Thermotoga thermarum DSM 5069]
Length = 230
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 89/177 (50%), Gaps = 27/177 (15%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIR 145
L P+F + L +LGA ++ +V + +R+IT +++H G++HLL N +L + G
Sbjct: 24 LSSIPVFRNQAYLLIRLGA-QYGPLVSGGEWYRVITAMFVHGGLLHLLFNSYALFYFGTI 82
Query: 146 LEQQFGFVRVGFVYLLSG-FGGAYYLLFLFNAVSL--------LVLLAAAL--------- 187
+E +G + YLL+G G +F + ++S+ LV + AL
Sbjct: 83 VESIYGTEKFVIFYLLAGAVGNLATHVFYYRSISVGASGAIFGLVGILFALGFRRDTPIF 142
Query: 188 ------LTLVVIIAINLAVGILP--HVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
+ L+ +I N+ G +P +++N AH+GGF+AG +G+ RP + +R
Sbjct: 143 MRQFTGMALLPMIIFNVVYGFMPGSNINNAAHLGGFLAGMAIGYFADPRPVYASWKR 199
>gi|456972143|gb|EMG12595.1| peptidase, S54 family [Leptospira interrogans serovar Grippotyphosa
str. LT2186]
Length = 226
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 62 FFYPDGPSLLEWGA---NRRIETLAGQWWRLVTNVFVHAGFPHLFFNGFGLIISAIFVEP 118
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 119 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 178
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 179 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGALSGIILF---QFG 223
>gi|398339922|ref|ZP_10524625.1| hypothetical protein LkirsB1_10989 [Leptospira kirschneri serovar
Bim str. 1051]
Length = 514
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN +HIGG + G +LG +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|227524649|ref|ZP_03954698.1| S54 family peptidase [Lactobacillus hilgardii ATCC 8290]
gi|227088133|gb|EEI23445.1| S54 family peptidase [Lactobacillus hilgardii ATCC 8290]
Length = 234
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 91/193 (47%), Gaps = 40/193 (20%)
Query: 70 GRGCVARFLGRLSFEPLKENPLFG---------------PSSSTLQKLGALEWDRVVHEH 114
G+G ++ F+GRL +P L G + + L + GA +++ ++
Sbjct: 8 GKGEIS-FMGRLRDKPYMTYALLGIMVLVYLLMTISGGTENVANLVRFGA-KYNPLIRAG 65
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF---------- 164
+ WRL+T I++H G H+L N ++L FIG +E FG R ++L+SG
Sbjct: 66 EYWRLLTPIFIHIGFTHILMNGITLYFIGQYVETLFGHWRFLLIFLVSGIAGNLASFAFS 125
Query: 165 -----GGAYYLLFLFNAVSLL-------VLLAAALLTLVVIIAINLAVGI-LPHVDNFAH 211
G + + LF A +L + + T ++ I +N+A I + +D +H
Sbjct: 126 PSLSAGASTSIFGLFGAFMMLGESFSRNQAIVSMARTFLLFIVLNIATDIFVSGIDIASH 185
Query: 212 IGGFMAGFLLGFV 224
+GG + GFL+ +V
Sbjct: 186 LGGLVGGFLIAYV 198
>gi|157363715|ref|YP_001470482.1| rhomboid family protein [Thermotoga lettingae TMO]
gi|157314319|gb|ABV33418.1| Rhomboid family protein [Thermotoga lettingae TMO]
Length = 228
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 80/157 (50%), Gaps = 27/157 (17%)
Query: 101 KLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYL 160
+ GA ++ +V + + +RLIT I++H G++HLL N +L + G +E +G + F YL
Sbjct: 39 RFGA-QYGPLVSDGEWYRLITAIFVHGGLLHLLFNSYALFYFGTIVESVYGPEKFIFSYL 97
Query: 161 LSG-FGGAYYLLFLFNAVSL--------LVLLAAAL---------------LTLVVIIAI 196
+G G LF + A+S+ LV + +L L+ +I
Sbjct: 98 ATGVVGNIATHLFYYRAISVGASGSIFGLVGILFSLGFRRDTPFFMKQFTGYALLPMILF 157
Query: 197 NLAVGILP--HVDNFAHIGGFMAGFLLGFVLLLRPQF 231
N+ G +P ++N AH+GGF G LLG++L RP +
Sbjct: 158 NIIYGFIPGSGINNAAHVGGFALGMLLGYLLSPRPAY 194
>gi|68071399|ref|XP_677613.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56497796|emb|CAH98853.1| conserved hypothetical protein [Plasmodium berghei]
Length = 490
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/194 (20%), Positives = 81/194 (41%), Gaps = 47/194 (24%)
Query: 100 QKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVY 159
+LG L + + + + +RL ++LH G++H++ N++ + I +E +GF+R F++
Sbjct: 176 NQLGGLNTNYIRNYGEIYRLFWSMYLHGGLMHIVFNVICQIQILWMIEPDWGFLRTLFLF 235
Query: 160 LLSGFGG----------------------------AYYLLFLFNAVSLLVLLAAALLTLV 191
+SG G AYY+ + + ++ ++
Sbjct: 236 FISGITGNLLSAVCDPCGVTIGSSGSLYGLIGALFAYYVEYW----KTIPRPCCVIIFMI 291
Query: 192 VIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV---------------LLLRPQFGWAER 236
+++ + +G+ + DN+AHIGG + G L GF +L P F W
Sbjct: 292 LVVIFGIFIGMFGYTDNYAHIGGCLGGILYGFATITTVSADKCTLGERMLTSPPFSWFLS 351
Query: 237 HQLPAQARVKSRHN 250
++ K+R
Sbjct: 352 NKTKQLIEEKAREK 365
>gi|421107208|ref|ZP_15567763.1| peptidase, S54 family [Leptospira kirschneri str. H2]
gi|410007727|gb|EKO61413.1| peptidase, S54 family [Leptospira kirschneri str. H2]
Length = 514
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/168 (29%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN +HIGG + G +LG +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|299823020|ref|ZP_07054906.1| possible Rhomboid protease [Listeria grayi DSM 20601]
gi|299816549|gb|EFI83787.1| possible Rhomboid protease [Listeria grayi DSM 20601]
Length = 512
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 74/151 (49%), Gaps = 23/151 (15%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+++ +++ + WRLIT ++LH G +H+ AN + L +G E+ +G R + L+ GF
Sbjct: 217 KFNPLIYAGEWWRLITPMFLHNGWMHIAANAVMLYIVGPWAEKIYGKWRFALILLIGGFA 276
Query: 166 GAYYLLFLFNAVSL-----LVLLAAALLTLVV----------------IIAINLAVGILP 204
G L N +S+ + + ALL LVV ++ +N+ +G+
Sbjct: 277 GNLASFVLNNHLSVGASTSVFAVFGALLYLVVLKPNLYAKTIGTNVATLVVVNILIGLFS 336
Query: 205 -HVDNFAHIGGFMAGFLL-GFVLLLRPQFGW 233
+D HIGG + GFL+ G + L F W
Sbjct: 337 AEIDMMGHIGGLVGGFLIAGSISLPNQYFNW 367
>gi|433633128|ref|YP_007266755.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070017]
gi|432164721|emb|CCK62183.1| Conserved membrane protein of unknown function [Mycobacterium
canettii CIPT 140070017]
Length = 249
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 87/192 (45%), Gaps = 32/192 (16%)
Query: 107 WDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG 166
W V Q +RL+T +LH G +HLL NM +L +G LE G +R G +Y +S GG
Sbjct: 67 WPPGVASGQTYRLVTSAFLHYGAMHLLLNMWALYVVGPPLEMWLGRLRFGALYAVSALGG 126
Query: 167 A--YYLLFLFNAVS------LLVLLAAALLT----------LVVIIAINLAVGIL-PHVD 207
+ YL+ N + + L A + +V +I INLA L P +
Sbjct: 127 SVLVYLIAPLNTATAGASGAVFGLFGATFMVARRLHLDVRWVVALIVINLAFTFLAPAIS 186
Query: 208 NFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVG 267
H+GG + G L+ + P+ ER L QA V + +VA V+LI
Sbjct: 187 WQGHVGGLVTGALVAAAYVYAPR----ERRNL-IQAAVT--------ITVLVAFVVLIGW 233
Query: 268 FTVGLVMLFRGE 279
TV L+ LF G
Sbjct: 234 RTVDLLALFGGR 245
>gi|422412807|ref|ZP_16489766.1| rhomboid family protein, partial [Listeria innocua FSL S4-378]
gi|313619110|gb|EFR90907.1| rhomboid family protein [Listeria innocua FSL S4-378]
Length = 472
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/189 (29%), Positives = 84/189 (44%), Gaps = 37/189 (19%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+++ +++ + WR I+ I+LH+G+IHL +N + L +G E+ +G R + LL G
Sbjct: 217 KFNPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYILILLLGGIC 276
Query: 166 G-----AYYLLFLFNAVSLLVLLAAALLTLVV----------------IIAINLAVGIL- 203
G A + A + + + ALL LVV ++AINL + +
Sbjct: 277 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGTSIASLVAINLLIDVFS 336
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQ-FGWAERHQLPAQARVKSRHNPYQYVLCIVALV 262
+D HIGG + GFLL L L Q F W R Y L VA++
Sbjct: 337 TQIDIAGHIGGLVGGFLLAGALSLPKQFFHW--------------RRLAYGVSLVAVAIL 382
Query: 263 LLIVGFTVG 271
L GF G
Sbjct: 383 FLYFGFQKG 391
>gi|358255317|dbj|GAA57029.1| inactive rhomboid protein 1 [Clonorchis sinensis]
Length = 249
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 7/106 (6%)
Query: 198 LAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
+G+ P +DNFAH+GGF+AG LL F+ L R +LP + R++ + N +
Sbjct: 135 FVLGLFPWLDNFAHLGGFVAGCLLTFIFLP------YSRLRLPNRCRLRPKPNKRLRIPI 188
Query: 258 IVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
V + +V + LF + +C WC+Y +C+P C
Sbjct: 189 EVVCFCTFLALSVMMFCLF-WLSPVLNCPWCNYFTCIPLVPHLCDQ 233
>gi|298245593|ref|ZP_06969399.1| Rhomboid family protein [Ktedonobacter racemifer DSM 44963]
gi|297553074|gb|EFH86939.1| Rhomboid family protein [Ktedonobacter racemifer DSM 44963]
Length = 294
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 54/168 (32%), Positives = 87/168 (51%), Gaps = 30/168 (17%)
Query: 81 LSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLV 140
+S +P + L + L GA +V +H+ WR +T ++LHA ++HL NML+L+
Sbjct: 81 ISIQPADDASL----TQVLIDYGAKYNPAIVQQHEYWRFLTPMFLHANLLHLGLNMLNLL 136
Query: 141 FIGIRLEQQFGFVRVGFVYLLSG----------------FGGAYYLLFLFNAVSLLVLLA 184
+GI LE+ G R F+Y+++G G + + L S+ V+
Sbjct: 137 MLGIFLERLLGHTRYLFLYIITGIISILASFYFAPEEVSLGASGAIFGLVGVFSIFVITH 196
Query: 185 A---------ALLTLVVIIAINLAVG-ILPHVDNFAHIGGFMAGFLLG 222
++L L+VII INL VG ++ +VDN+AH GG ++G LLG
Sbjct: 197 RRAFPFGGLFSILYLIVIIGINLGVGFMIANVDNYAHFGGLISGCLLG 244
>gi|148269479|ref|YP_001243939.1| rhomboid family protein [Thermotoga petrophila RKU-1]
gi|170288153|ref|YP_001738391.1| rhomboid family protein [Thermotoga sp. RQ2]
gi|281411803|ref|YP_003345882.1| Rhomboid family protein [Thermotoga naphthophila RKU-10]
gi|147735023|gb|ABQ46363.1| Rhomboid family protein [Thermotoga petrophila RKU-1]
gi|170175656|gb|ACB08708.1| Rhomboid family protein [Thermotoga sp. RQ2]
gi|281372906|gb|ADA66468.1| Rhomboid family protein [Thermotoga naphthophila RKU-10]
Length = 235
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 29/146 (19%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF-GGAYYLLFLFN 175
+RLIT +++H G++H+L N +L + G+ +E +G + Y +G G +F +
Sbjct: 55 FRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLATHVFYHD 114
Query: 176 AVS----------LLVLLAAAL-------------LTLVVIIAINLAVGILP--HVDNFA 210
+S + +L AA ++L+ II IN+ G LP +++N A
Sbjct: 115 TISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGMSLLPIILINVVYGFLPGTNINNAA 174
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAER 236
H+GGF++G LLG+ +RP F W R
Sbjct: 175 HLGGFLSGMLLGYT--MRP-FSWKRR 197
>gi|357400681|ref|YP_004912606.1| hypothetical protein SCAT_3097 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|386356736|ref|YP_006054982.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
gi|337767090|emb|CCB75801.1| conserved membrane protein of unknown function [Streptomyces
cattleya NRRL 8057 = DSM 46488]
gi|365807244|gb|AEW95460.1| hypothetical protein SCATT_30890 [Streptomyces cattleya NRRL 8057 =
DSM 46488]
Length = 282
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 55/149 (36%), Positives = 73/149 (48%), Gaps = 24/149 (16%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA--Y 168
V E Q +RL+T +LH V+H+ NMLSL +IG LE G VR VYLLS GG+
Sbjct: 112 VAEGQWYRLLTATFLHQNVMHIGFNMLSLWWIGPGLEVALGRVRFLAVYLLSALGGSALS 171
Query: 169 YLLFLFNAVSL------LVLLAAALL----------TLVVIIAINL--AVGILPHVDNFA 210
+LL NA SL LL A + +V II +NL +D A
Sbjct: 172 FLLANPNAGSLGASGAVFGLLGATFVLMRRLRYDSRPIVAIIVLNLFFTFAQTGTIDWRA 231
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQL 239
HIGG + G ++ F ++ P+ ER L
Sbjct: 232 HIGGLVTGAVVAFGMVHAPR----ERRAL 256
>gi|395768820|ref|ZP_10449335.1| hypothetical protein Saci8_03541 [Streptomyces acidiscabies 84-104]
Length = 298
Score = 55.1 bits (131), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 77/148 (52%), Gaps = 21/148 (14%)
Query: 104 ALEWDRV--VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
AL WD++ V E Q +RL+T ++LH +IH+L+N LSL +IG LE G R ++ +
Sbjct: 121 ALGWDQLQGVAEGQWYRLLTSMFLHGSIIHILSNALSLWWIGGPLEAALGRARYLALFFV 180
Query: 162 SGFGGA--YYLLFLFNAVSL-------LVLLAAALL---------TLVVIIAINLAVGI- 202
SG G+ YL+ N SL V A A+L ++ I+ INL +
Sbjct: 181 SGLAGSALTYLVAEPNQASLGASGAIFGVFGAMAVLMRRQRYDMRPMIAILVINLIITFG 240
Query: 203 LPHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
+ AH+GG +AG ++G ++ P+
Sbjct: 241 WSGIAWQAHVGGLVAGVIIGAGMVYAPR 268
>gi|393199141|ref|YP_006460983.1| membrane protein [Solibacillus silvestris StLB046]
gi|406666244|ref|ZP_11074012.1| Rhomboid protease gluP [Bacillus isronensis B3W22]
gi|327438472|dbj|BAK14837.1| uncharacterized membrane protein [Solibacillus silvestris StLB046]
gi|405385783|gb|EKB45214.1| Rhomboid protease gluP [Bacillus isronensis B3W22]
Length = 207
Score = 54.7 bits (130), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 23/131 (17%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG---------A 167
WR+IT ++LHAG +H+L NM SL G LE+ G +R +Y L+G G A
Sbjct: 58 WRIITSMFLHAGFMHVLFNMFSLFLFGPELEKIAGKMRFLTIYFLAGIFGVAATYATQDA 117
Query: 168 YY--------LLFLFNAVSLLVLLAAALL-----TLVVIIAINLAVGIL-PHVDNFAHIG 213
YY L +F A LV L ++ +I I++ + L P+++ AH+G
Sbjct: 118 YYASVGASGALYGIFGAFGALVYYTRHLFPQLRQIILPLIVISIIMTFLTPNINIAAHLG 177
Query: 214 GFMAGFLLGFV 224
G + GF+LG V
Sbjct: 178 GLVTGFILGVV 188
>gi|395238215|ref|ZP_10416153.1| Possible membrane protein [Lactobacillus gigeriorum CRBIP 24.85]
gi|394477919|emb|CCI86130.1| Possible membrane protein [Lactobacillus gigeriorum CRBIP 24.85]
Length = 230
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/184 (26%), Positives = 83/184 (45%), Gaps = 36/184 (19%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
+++TL +LGA+ V Q WRL T +LH G++HL++N + + ++G+ LE G +
Sbjct: 33 ENTATLIRLGAMNNYTVAAAGQWWRLFTAQFLHIGIMHLVSNAVMIYYLGMFLEPLLGHI 92
Query: 154 RVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLV---------------------- 191
R VYL+SG GG L + S+ + AL L
Sbjct: 93 RFLAVYLISGIGGNLLSFALGDDRSISAGASTALFGLFGALIAVGVRNATSVEGSNSLIS 152
Query: 192 -------VIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQA 243
V+ IN+ + + +P++D H+GG G +L +L G ++ A+
Sbjct: 153 YISRQAFVLALINIGLDLFIPNIDLQGHLGGLFTGAMLTIIL------GNRATNKFSAKV 206
Query: 244 RVKS 247
R+ S
Sbjct: 207 RIIS 210
>gi|373464451|ref|ZP_09555990.1| peptidase, S54 family [Lactobacillus kisonensis F0435]
gi|371762653|gb|EHO51182.1| peptidase, S54 family [Lactobacillus kisonensis F0435]
Length = 220
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 46/151 (30%), Positives = 76/151 (50%), Gaps = 24/151 (15%)
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
TL + GA +++ + + WRLIT +++H G H+L N ++L FIG +EQ FG R
Sbjct: 36 TLVRFGA-KYNPAIRAGEYWRLITPMFIHIGFTHILMNGITLYFIGEYVEQLFGHWRFLT 94
Query: 158 VYLLSGF--------------GGAYYLLF-LFNAVSLL-------VLLAAALLTLVVIIA 195
++L+SG GA +F LF A +L ++ + T ++ I
Sbjct: 95 IFLVSGIVGNLASFVFSYGLTAGASTAIFGLFGAFMMLGESFSKNPVITSMAKTFLLFIV 154
Query: 196 INLAVGILPH-VDNFAHIGGFMAGFLLGFVL 225
+N+ I +D HIGG + GFL+ +V+
Sbjct: 155 LNIGTDIFVQGIDIAGHIGGLIGGFLIAYVV 185
>gi|309808584|ref|ZP_07702478.1| peptidase, S54 family [Lactobacillus iners LactinV 01V1-a]
gi|308168180|gb|EFO70304.1| peptidase, S54 family [Lactobacillus iners LactinV 01V1-a]
Length = 182
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 85/193 (44%), Gaps = 46/193 (23%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG---- 165
VV + Q WRL T ++HAG H++ N++ + F G+ LEQ G +R +YLLSG G
Sbjct: 6 VVTKLQFWRLFTAQFIHAGFFHIICNIVMIYFFGMYLEQFLGHIRYLTIYLLSGVGGNLL 65
Query: 166 ------------GAYYLLF-LFNAVSLLVLLAA-----------ALLTLVVIIAINLAVG 201
GA +F L +V L L A L L+ I ++
Sbjct: 66 SFALGQDNVISCGASTAVFGLMGSVLALYFLNNDNIIAIIIGRQAFLLLICNIVVDF--- 122
Query: 202 ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVAL 261
+P VD HIGG + GFLL +L G P++ RV + C++ +
Sbjct: 123 FMPSVDIIGHIGGTITGFLLTIIL------GSIFFKDAPSKIRV---------LFCVIFI 167
Query: 262 VLLIVGFTVGLVM 274
+ L+ G+V+
Sbjct: 168 IYLVYCLRQGMVI 180
>gi|429205379|ref|ZP_19196656.1| Integral membrane protein, Rhomboid family [Lactobacillus
saerimneri 30a]
gi|428146451|gb|EKW98690.1| Integral membrane protein, Rhomboid family [Lactobacillus
saerimneri 30a]
Length = 224
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 68/147 (46%), Gaps = 26/147 (17%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF------------ 164
WRLI ++LH G+ HL NM++L FIG +E +G R+ +YLLSG
Sbjct: 67 WRLIAAMFLHDGIGHLFINMITLYFIGPEIEDHYGHARMLVIYLLSGLYGNLLSAFWAPT 126
Query: 165 ----GGAYYLLFLFNAVSLL------VLLAAALLTLVVIIAINLAVGILPHVDNFAHIGG 214
G + L LF A +L + A ++ + +N+ +G + D H+GG
Sbjct: 127 TLAVGASGALFGLFGAYLILGHQSTDAQIQAQARQFLLFVILNVVLGFSGNTDLAGHVGG 186
Query: 215 FMAGFLLGFVLLLRPQFGWAERHQLPA 241
+AG L+ L +A R QL A
Sbjct: 187 LIAGCLVTISL----DTTFATRKQLLA 209
>gi|392902169|ref|NP_001076719.2| Protein ROM-4, isoform c [Caenorhabditis elegans]
gi|358246510|emb|CCE72194.1| Protein ROM-4, isoform c [Caenorhabditis elegans]
Length = 1205
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 24/143 (16%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AYYLL 171
+Q +RL T +++HAGVIHL ++L ++ LE R+ +Y SG GG A +
Sbjct: 928 NQFYRLFTSLFVHAGVIHLALSLLFQYYVMKDLENLIASKRMAILYFASGIGGNLASAIF 987
Query: 172 FLFN-----AVSLLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNF 209
+N + + +LAA AL+ +++ + L +G +P VDN+
Sbjct: 988 VPYNPAVGPSSAQCGILAAVIVECCDNRRIIKEFKWALVQHLIVTLLVLCIGFIPWVDNW 1047
Query: 210 AHIGGFMAGFLLGFVLLLRPQFG 232
AH+ G + G L ++ FG
Sbjct: 1048 AHLFGTIFGLLTTIIIFPYLDFG 1070
>gi|359419226|ref|ZP_09211185.1| putative rhomboid family protein [Gordonia araii NBRC 100433]
gi|358244841|dbj|GAB09254.1| putative rhomboid family protein [Gordonia araii NBRC 100433]
Length = 218
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 88/202 (43%), Gaps = 46/202 (22%)
Query: 49 NVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQKLGALEWD 108
NVAVF + Y + G G +F ++P+F S+ T
Sbjct: 2 NVAVFAICFY---------QAGTG---------NFYGYVDSPVFNNSTLTPTD------- 36
Query: 109 RVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAY 168
+ H+ WRL+T +LH ++H+ NM+SLV +G +E G R VYL++ FGG+
Sbjct: 37 --IANHEYWRLLTSGFLHLSIMHIAVNMISLVLLGTIIEPILGTARFLLVYLVALFGGSA 94
Query: 169 YLLFL-------FNAVSLLVLLAAALLTLVV-----------IIAINLAVGI-LPHVDNF 209
+ L A + L A+L +V+ IIA+N+ + I +P +
Sbjct: 95 AVTLLSGTNTATAGASGAIYGLMGAMLVIVLKFKAPAGQVIAIIAVNIFISISVPGISLV 154
Query: 210 AHIGGFMAGFLLGFVLLLRPQF 231
H+GG + G L L P+
Sbjct: 155 GHLGGLLFGTLATVAALYLPEL 176
>gi|392902171|ref|NP_001041013.2| Protein ROM-4, isoform a [Caenorhabditis elegans]
gi|222350000|emb|CAB55122.3| Protein ROM-4, isoform a [Caenorhabditis elegans]
Length = 1203
Score = 54.7 bits (130), Expect = 5e-05, Method: Composition-based stats.
Identities = 40/143 (27%), Positives = 68/143 (47%), Gaps = 24/143 (16%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AYYLL 171
+Q +RL T +++HAGVIHL ++L ++ LE R+ +Y SG GG A +
Sbjct: 926 NQFYRLFTSLFVHAGVIHLALSLLFQYYVMKDLENLIASKRMAILYFASGIGGNLASAIF 985
Query: 172 FLFN-----AVSLLVLLAA-----------------ALLTLVVIIAINLAVGILPHVDNF 209
+N + + +LAA AL+ +++ + L +G +P VDN+
Sbjct: 986 VPYNPAVGPSSAQCGILAAVIVECCDNRRIIKEFKWALVQHLIVTLLVLCIGFIPWVDNW 1045
Query: 210 AHIGGFMAGFLLGFVLLLRPQFG 232
AH+ G + G L ++ FG
Sbjct: 1046 AHLFGTIFGLLTTIIIFPYLDFG 1068
>gi|340399717|ref|YP_004728742.1| hypothetical protein SALIVB_1971 [Streptococcus salivarius CCHSS3]
gi|338743710|emb|CCB94220.1| hypothetical protein SALIVB_1971 [Streptococcus salivarius CCHSS3]
Length = 224
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 73/150 (48%), Gaps = 24/150 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQG-WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S +L K+GA+ V + WRL+T I++H GV H L NML+L F+G EQ FG +
Sbjct: 36 SPLSLFKMGAMYGAFVRYSPLNLWRLVTPIFVHIGVEHFLFNMLALYFMGKMAEQIFGTL 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL---------------TLV 191
R +YLL+G G A LLF N + SL L AA ++ +
Sbjct: 96 RFLGLYLLAGVMGNALTLLFTPNVIAAGASTSLFGLFAAVVILGYYSHSPLLNQLGRNYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFL 220
+I INL + P V H+GG + G L
Sbjct: 156 ALIVINLIFNLFTPSVGITGHLGGLVGGAL 185
>gi|456824612|gb|EMF73038.1| peptidase, S54 family [Leptospira interrogans serovar Canicola str.
LT1962]
Length = 226
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 62 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 118
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 119 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 178
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 179 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 223
>gi|355683178|ref|ZP_09062854.1| hypothetical protein HMPREF9469_05891 [Clostridium citroniae
WAL-17108]
gi|354810660|gb|EHE95300.1| hypothetical protein HMPREF9469_05891 [Clostridium citroniae
WAL-17108]
Length = 206
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 76/178 (42%), Gaps = 45/178 (25%)
Query: 90 PLFGPSSSTL--QKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE 147
L G + T+ K GA+ VV + +RL+T ++LH G HL+ NML L +G R+E
Sbjct: 28 ELIGDTEDTMFMMKHGAVYEPLVVMRGEYYRLLTSMFLHFGASHLMNNMLVLFVLGERME 87
Query: 148 QQFGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALL------------------- 188
Q G V+ F Y+ SG N +S++V +
Sbjct: 88 QVLGHVKYFFFYMASGIFA--------NIISIVVHMEKGYAAVSAGASGAIFGVVGGLVY 139
Query: 189 ---------------TLVVIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQ 230
L +I + L G +DN+AHIGG ++GF+L +L RP+
Sbjct: 140 VVAVNHGQLDGLTNRQLGFMILLTLYHGFTATGIDNWAHIGGLISGFILSILLYRRPR 197
>gi|374340237|ref|YP_005096973.1| hypothetical protein Marpi_1272 [Marinitoga piezophila KA3]
gi|372101771|gb|AEX85675.1| putative membrane protein [Marinitoga piezophila KA3]
Length = 235
Score = 54.7 bits (130), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 80/162 (49%), Gaps = 25/162 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+S TL GA + HQ +R IT +++H G++H+ N+ +L ++G +E+ +G +
Sbjct: 40 NSYTLIVAGAQYGKLITIYHQYFRFITALFVHGGILHISFNLYALYYLGNIVERVYGPYK 99
Query: 155 VGFVYLLSGFGGAYYL-LFLFNAVS---------LLVLLAAALL--------------TL 190
+YL SG GG +F+ NA S L+ LL A L
Sbjct: 100 FLTIYLASGIGGGILTQIFIPNAFSVGASGAIFGLIGLLFGAGFRDDTPPMLKPMTGTAL 159
Query: 191 VVIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQF 231
+ +I INL +G ++NFAHIGG + GF G++ +R +
Sbjct: 160 LPVILINLFLGFTSSGINNFAHIGGLLVGFTFGWLTSVRDTY 201
>gi|451946059|ref|YP_007466654.1| putative membrane protein [Desulfocapsa sulfexigens DSM 10523]
gi|451905407|gb|AGF77001.1| putative membrane protein [Desulfocapsa sulfexigens DSM 10523]
Length = 281
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 57/242 (23%), Positives = 110/242 (45%), Gaps = 56/242 (23%)
Query: 32 GSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPL 91
G+D T ++ + V N+A+F++++ I+ L +PL
Sbjct: 46 GTDTNDT--ILKVIVATNIAMFVLSLVID--------------------LKHTGFSSSPL 83
Query: 92 --FGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
PS+++L LG+ + ++ W L++ +LH ++HL+ NM+++ IG L ++
Sbjct: 84 NFLSPSNNSLLILGSTGTIPIFQLNRWWSLLSANYLHGSLLHLVFNMIAIYQIGPLLIRE 143
Query: 150 FGFVRVGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVII-------------AI 196
+G ++ +Y LSG GG +++ +F V + +AAL L+ AI
Sbjct: 144 YGVSKMFIIYTLSGIGG-FFISSVF-GVRFTIGASAALCGLIGAALYYGKSRGGTYGNAI 201
Query: 197 NLAVG-----------ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
+G ++P ++N+ H GG + G L G++L G+ ER Q ++
Sbjct: 202 YNQIGGWALGIFLFGFMVPGINNWGHGGGMLVGALSGYLL------GYRERSQEKIGHKL 255
Query: 246 KS 247
S
Sbjct: 256 SS 257
>gi|227513507|ref|ZP_03943556.1| S54 family peptidase [Lactobacillus buchneri ATCC 11577]
gi|227083380|gb|EEI18692.1| S54 family peptidase [Lactobacillus buchneri ATCC 11577]
Length = 234
Score = 54.7 bits (130), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 40/193 (20%)
Query: 70 GRGCVARFLGRLSFEPLKENPLFG---------------PSSSTLQKLGALEWDRVVHEH 114
G+G ++ F+GRL +P L G + + L + GA +++ ++
Sbjct: 8 GKGEIS-FMGRLRDKPYMTYALLGIMVLVYLLMTISGGTENVANLVRFGA-KYNPLIRAG 65
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF---------- 164
+ WRL+T I++H G H+L N ++L FIG +E FG R ++L+SG
Sbjct: 66 EYWRLLTPIFIHIGFTHILMNGITLYFIGQYVETLFGHWRFLLIFLVSGIAGNLASFAFS 125
Query: 165 -----GGAYYLLFLFNAVSLL-------VLLAAALLTLVVIIAINLAVGI-LPHVDNFAH 211
G + + LF A +L + + T ++ I +N+A I + +D H
Sbjct: 126 PSLSAGASTSIFGLFGAFMMLGESFSRNQAIVSMARTFLLFIVLNIATDIFVSGIDIAGH 185
Query: 212 IGGFMAGFLLGFV 224
+GG + GFL+ +V
Sbjct: 186 LGGLVGGFLIAYV 198
>gi|418670564|ref|ZP_13231935.1| peptidase, S54 family [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
gi|421121687|ref|ZP_15581980.1| peptidase, S54 family [Leptospira interrogans str. Brem 329]
gi|410345538|gb|EKO96634.1| peptidase, S54 family [Leptospira interrogans str. Brem 329]
gi|410753946|gb|EKR15604.1| peptidase, S54 family [Leptospira interrogans serovar Pyrogenes
str. 2006006960]
Length = 226
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 76/168 (45%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 62 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEP 118
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 119 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKK 178
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 179 NVLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 223
>gi|16973676|gb|AAL32367.1| C16ORF8 [Mus musculus]
Length = 856
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 87/211 (41%), Gaps = 41/211 (19%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG----AYYL 170
Q +RL ++LHAG++H L ++ + + LE+ G+ R+ +YLLSG G A +L
Sbjct: 653 QFYRLWLSLFLHAGILHCLVSVCFQMTVLRDLEKLAGWHRIAIIYLLSGITGNLASAIFL 712
Query: 171 LF--------------------LFNAVSLLVLLAAALLTLVVIIAINLAVGILPHVDNFA 210
+ LF + +L A L+ ++ A G+LP +DNFA
Sbjct: 713 PYRAEVGPAGSQFGILACLFVELFQSWQILARPWRAFFKLLAVVLFLFAFGLLPWIDNFA 772
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
G L F L FG + ++ Q + I +V L + +
Sbjct: 773 QHLGLCQRLFLSFAFLPYISFGKFDLYRKRCQ-------------IIIFQVVFLGLLAGL 819
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKC 301
++ F C WC +L+C+P + C
Sbjct: 820 VVLFYFYPVR----CEWCEFLTCIPFTDKFC 846
>gi|399526757|ref|ZP_10766509.1| peptidase, S54 family [Actinomyces sp. ICM39]
gi|398362686|gb|EJN46363.1| peptidase, S54 family [Actinomyces sp. ICM39]
Length = 290
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 76/153 (49%), Gaps = 26/153 (16%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF---- 172
W ++T +LH G++H+L NMLSL ++G +E G+ R VYL+S GG+ +++
Sbjct: 111 WTILTGAFLHGGLLHILFNMLSLYWVGRAIEPVMGWWRFLTVYLVSALGGSAFIIAWCLI 170
Query: 173 ------------------LFNAVSLLVLLAAALLT-LVVIIAINLAVG-ILPHVDNFAHI 212
LF AV +L L + T ++ ++ +NL G ++ + HI
Sbjct: 171 QPSEIYVSTVGASAAVFGLFGAVFVLQRLGGSDTTAILTLLGVNLVYGFMVSGISWQGHI 230
Query: 213 GGFMAGFLLGFVL--LLRPQFGWAERHQLPAQA 243
GG +AG +VL + RP+ G E Q QA
Sbjct: 231 GGAIAGVAATWVLVRMARPRSGVTEAAQNRRQA 263
>gi|322378009|ref|ZP_08052496.1| rhomboid family protein [Streptococcus sp. M334]
gi|321280991|gb|EFX58004.1| rhomboid family protein [Streptococcus sp. M334]
Length = 225
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 83/177 (46%), Gaps = 35/177 (19%)
Query: 96 SSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ TL + GA+ + + Q WRL + I++H G H + NMLSL ++G ++E+ FG +
Sbjct: 37 ADTLFRFGAMYGPAIRLFPEQTWRLFSAIFVHIGWEHFIVNMLSLYYLGRQVEEIFGSKK 96
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSL---------------LVL-----------LAAALL 188
F+YLLSG G + +F+F+ SL +VL L + L
Sbjct: 97 FFFLYLLSGMMGNLF-VFVFSPKSLAAGASTSLYGVFAAIIVLRYATRNPYIQQLGQSYL 155
Query: 189 TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
TL V+ I ++P + HIGG + G LL + +R ER A R+
Sbjct: 156 TLFVVNIIGSV--LIPGISLAGHIGGAVGGALLAIIFPVR-----GERRMYSASQRL 205
>gi|227519427|ref|ZP_03949476.1| S54 family peptidase [Enterococcus faecalis TX0104]
gi|424678054|ref|ZP_18114899.1| peptidase, S54 family [Enterococcus faecalis ERV103]
gi|424679974|ref|ZP_18116787.1| peptidase, S54 family [Enterococcus faecalis ERV116]
gi|424684441|ref|ZP_18121157.1| peptidase, S54 family [Enterococcus faecalis ERV129]
gi|424687903|ref|ZP_18124525.1| peptidase, S54 family [Enterococcus faecalis ERV25]
gi|424689750|ref|ZP_18126306.1| peptidase, S54 family [Enterococcus faecalis ERV31]
gi|424694204|ref|ZP_18130609.1| peptidase, S54 family [Enterococcus faecalis ERV37]
gi|424696292|ref|ZP_18132647.1| peptidase, S54 family [Enterococcus faecalis ERV41]
gi|424700479|ref|ZP_18136665.1| peptidase, S54 family [Enterococcus faecalis ERV62]
gi|424704746|ref|ZP_18140840.1| peptidase, S54 family [Enterococcus faecalis ERV63]
gi|424706937|ref|ZP_18142930.1| peptidase, S54 family [Enterococcus faecalis ERV65]
gi|424718163|ref|ZP_18147420.1| peptidase, S54 family [Enterococcus faecalis ERV68]
gi|424720446|ref|ZP_18149548.1| peptidase, S54 family [Enterococcus faecalis ERV72]
gi|424726078|ref|ZP_18154762.1| peptidase, S54 family [Enterococcus faecalis ERV73]
gi|424734075|ref|ZP_18162625.1| peptidase, S54 family [Enterococcus faecalis ERV81]
gi|424746066|ref|ZP_18174317.1| peptidase, S54 family [Enterococcus faecalis ERV85]
gi|424753580|ref|ZP_18181522.1| peptidase, S54 family [Enterococcus faecalis ERV93]
gi|227073134|gb|EEI11097.1| S54 family peptidase [Enterococcus faecalis TX0104]
gi|402352548|gb|EJU87394.1| peptidase, S54 family [Enterococcus faecalis ERV103]
gi|402355193|gb|EJU89971.1| peptidase, S54 family [Enterococcus faecalis ERV116]
gi|402361515|gb|EJU96072.1| peptidase, S54 family [Enterococcus faecalis ERV129]
gi|402362568|gb|EJU97093.1| peptidase, S54 family [Enterococcus faecalis ERV25]
gi|402366516|gb|EJV00887.1| peptidase, S54 family [Enterococcus faecalis ERV31]
gi|402371419|gb|EJV05578.1| peptidase, S54 family [Enterococcus faecalis ERV37]
gi|402373701|gb|EJV07766.1| peptidase, S54 family [Enterococcus faecalis ERV62]
gi|402378181|gb|EJV12058.1| peptidase, S54 family [Enterococcus faecalis ERV41]
gi|402381183|gb|EJV14896.1| peptidase, S54 family [Enterococcus faecalis ERV63]
gi|402382489|gb|EJV16152.1| peptidase, S54 family [Enterococcus faecalis ERV68]
gi|402386145|gb|EJV19654.1| peptidase, S54 family [Enterococcus faecalis ERV65]
gi|402389794|gb|EJV23175.1| peptidase, S54 family [Enterococcus faecalis ERV73]
gi|402390594|gb|EJV23928.1| peptidase, S54 family [Enterococcus faecalis ERV81]
gi|402393308|gb|EJV26536.1| peptidase, S54 family [Enterococcus faecalis ERV72]
gi|402397911|gb|EJV30902.1| peptidase, S54 family [Enterococcus faecalis ERV85]
gi|402403870|gb|EJV36518.1| peptidase, S54 family [Enterococcus faecalis ERV93]
Length = 236
Score = 54.3 bits (129), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 88/193 (45%), Gaps = 39/193 (20%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ V H+ WR IT ++LH G +H++ NM++L +IG ++E +G R +YLLS
Sbjct: 49 GAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWRYLGIYLLS 108
Query: 163 GFGG--AYYLLFLFNAVS------LLVLLAA------------ALLTLV----VIIAINL 198
G G A + N+VS L L A A++ +V + I INL
Sbjct: 109 GIAGNIASFAFGTPNSVSAGASTALFGLFGAFVILGRHFRDNPAIMYMVQRYSMFIVINL 168
Query: 199 AVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
+ VD H+GG + G L+ A +P + + ++H L
Sbjct: 169 LFNLFSSSVDMMGHVGGLIGGLLV------------ATAFAVPNREKAFNKHERIMATLI 216
Query: 258 IVALVL--LIVGF 268
+ LV+ L++GF
Sbjct: 217 FIFLVVICLLLGF 229
>gi|46907563|ref|YP_013952.1| rhomboid family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|424714211|ref|YP_007014926.1| Rhomboid family protein [Listeria monocytogenes serotype 4b str.
LL195]
gi|46880831|gb|AAT04129.1| rhomboid family protein [Listeria monocytogenes serotype 4b str.
F2365]
gi|424013395|emb|CCO63935.1| Rhomboid family protein [Listeria monocytogenes serotype 4b str.
LL195]
Length = 518
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 223 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 282
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 283 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 342
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 343 SQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|334135017|ref|ZP_08508518.1| peptidase, S54 family [Paenibacillus sp. HGF7]
gi|333607519|gb|EGL18832.1| peptidase, S54 family [Paenibacillus sp. HGF7]
Length = 204
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/159 (32%), Positives = 72/159 (45%), Gaps = 41/159 (25%)
Query: 95 SSSTLQKLGAL--------EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRL 146
S+ TL + GAL EW WR T ++LH G+ HLL N +LV L
Sbjct: 41 STRTLIEYGALFSAPGFVPEW---------WRFFTAMFLHIGLSHLLFNSFALVIFAPPL 91
Query: 147 EQQFGFVRVGFVYLLSG-FGGAY---------------------YLLFLFNAVSLLVLLA 184
E+ G VR YL SG G A+ Y +L+ A+ LL
Sbjct: 92 ERLLGSVRYAVFYLASGALGSAFSYWLHTDAYVAAGASGAIYGIYAAYLYLALFRRQLLD 151
Query: 185 AALLTLVVIIAIN--LAVGILPHVDNFAHIGGFMAGFLL 221
V+II ++ L I+P+VD + H+GGF+AGF+L
Sbjct: 152 QQSRQTVIIILVSGLLFSVIVPNVDLYTHLGGFLAGFIL 190
>gi|238061764|ref|ZP_04606473.1| rhomboid family protein [Micromonospora sp. ATCC 39149]
gi|237883575|gb|EEP72403.1| rhomboid family protein [Micromonospora sp. ATCC 39149]
Length = 303
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 77/149 (51%), Gaps = 22/149 (14%)
Query: 104 ALEWDRVVH---EHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYL 160
AL D VH + + +RL+T ++LH GV+HLL NM +L +G LE G +R +YL
Sbjct: 124 ALFPDGSVHGIVQGEWYRLVTAMFLHYGVVHLLLNMWALWVLGRSLEANLGPLRFLALYL 183
Query: 161 LSGFGG--AYYLLFLFNAVS------LLVLLAAALL----------TLVVIIAINLAVGI 202
++GFGG A YL NA + + L AA ++ +++ ++ INL +
Sbjct: 184 IAGFGGNVAAYLFSAENATTAGASTAIFGLFAALIVIERRMGRDISSVLPVLVINLVFTL 243
Query: 203 -LPHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
+P + H+GG + G + +L P+
Sbjct: 244 TVPGISIPGHLGGLVTGGAMALMLAYAPR 272
>gi|154505636|ref|ZP_02042374.1| hypothetical protein RUMGNA_03175 [Ruminococcus gnavus ATCC 29149]
gi|336431736|ref|ZP_08611578.1| hypothetical protein HMPREF0991_00697 [Lachnospiraceae bacterium
2_1_58FAA]
gi|153794075|gb|EDN76495.1| putative rhomboid protease GluP [Ruminococcus gnavus ATCC 29149]
gi|336019755|gb|EGN49477.1| hypothetical protein HMPREF0991_00697 [Lachnospiraceae bacterium
2_1_58FAA]
Length = 200
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 33/172 (19%)
Query: 81 LSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLV 140
LSF EN +F + K GA+ + + Q +RLITCI+LH G+ HL+ NM+ L
Sbjct: 24 LSFLGNPENAVF------MIKYGAMYPPLIFEDAQYYRLITCIFLHFGIDHLMNNMVMLG 77
Query: 141 FIGIRLEQQFGFVRVGFVYLLSGFG-------------------GAYYLLFLFNAVSLLV 181
+G LE++ G + +Y +SG G GA +F L V
Sbjct: 78 ALGWNLEKEIGSFKFLLIYFVSGIGANLISLAMDFYTGNLAVSAGASGAIFGLLGALLWV 137
Query: 182 LL----AAALLT---LVVIIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVL 225
++ A LT ++ ++ ++L G VDN AH+GG + GFL +L
Sbjct: 138 VIRNRGKAGRLTGRGMLFMVLLSLYFGFTSTGVDNAAHVGGLICGFLTAVLL 189
>gi|330718407|ref|ZP_08313007.1| membrane-associated serine protease [Leuconostoc fallax KCTC 3537]
Length = 229
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 58/92 (63%), Gaps = 1/92 (1%)
Query: 99 LQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFV 158
L ++GA + ++H+ WRL+T I+LHAG++H++ NM++L FIG E+ FG + +
Sbjct: 45 LVEMGAKWGPYIQYQHEYWRLLTPIFLHAGMMHIIMNMITLWFIGPLAERYFGSRKYLLL 104
Query: 159 YLLSGFGGAYYLLFLFNAVSLLVLLAAALLTL 190
YL G G L +LF+ +S+ V +++L L
Sbjct: 105 YLFGGVMGN-ILSYLFSPLSISVGASSSLFAL 135
>gi|404280891|ref|YP_006681789.1| rhomboid family protein [Listeria monocytogenes SLCC2755]
gi|404286756|ref|YP_006693342.1| rhomboid family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
gi|405749679|ref|YP_006673145.1| rhomboid family protein [Listeria monocytogenes ATCC 19117]
gi|405755466|ref|YP_006678930.1| rhomboid family protein [Listeria monocytogenes SLCC2540]
gi|417317486|ref|ZP_12104103.1| rhomboid family protein [Listeria monocytogenes J1-220]
gi|328475056|gb|EGF45844.1| rhomboid family protein [Listeria monocytogenes J1-220]
gi|404218879|emb|CBY70243.1| rhomboid family protein [Listeria monocytogenes ATCC 19117]
gi|404224666|emb|CBY76028.1| rhomboid family protein [Listeria monocytogenes SLCC2540]
gi|404227526|emb|CBY48931.1| rhomboid family protein [Listeria monocytogenes SLCC2755]
gi|404245685|emb|CBY03910.1| rhomboid family protein [Listeria monocytogenes serotype 7 str.
SLCC2482]
Length = 512
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 217 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 276
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 277 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 336
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 337 SQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|226223938|ref|YP_002758045.1| hypothetical protein Lm4b_01345 [Listeria monocytogenes serotype 4b
str. CLIP 80459]
gi|386732075|ref|YP_006205571.1| rhomboid family protein [Listeria monocytogenes 07PF0776]
gi|405752554|ref|YP_006676019.1| rhomboid family protein [Listeria monocytogenes SLCC2378]
gi|406704108|ref|YP_006754462.1| rhomboid family protein [Listeria monocytogenes L312]
gi|225876400|emb|CAS05109.1| Hypothetical protein of unknown function [Listeria monocytogenes
serotype 4b str. CLIP 80459]
gi|384390833|gb|AFH79903.1| rhomboid family protein [Listeria monocytogenes 07PF0776]
gi|404221754|emb|CBY73117.1| rhomboid family protein [Listeria monocytogenes SLCC2378]
gi|406361138|emb|CBY67411.1| rhomboid family protein [Listeria monocytogenes L312]
Length = 512
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 217 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 276
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 277 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 336
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 337 SQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|47093617|ref|ZP_00231374.1| rhomboid family protein [Listeria monocytogenes str. 4b H7858]
gi|254932348|ref|ZP_05265707.1| rhomboid family protein [Listeria monocytogenes HPB2262]
gi|258611754|ref|ZP_05241962.2| rhomboid family protein [Listeria monocytogenes FSL R2-503]
gi|300765423|ref|ZP_07075405.1| rhomboid family protein [Listeria monocytogenes FSL N1-017]
gi|424823099|ref|ZP_18248112.1| Rhomboid family protein [Listeria monocytogenes str. Scott A]
gi|47017993|gb|EAL08769.1| rhomboid family protein [Listeria monocytogenes str. 4b H7858]
gi|258605928|gb|EEW18536.1| rhomboid family protein [Listeria monocytogenes FSL R2-503]
gi|293583904|gb|EFF95936.1| rhomboid family protein [Listeria monocytogenes HPB2262]
gi|300513860|gb|EFK40925.1| rhomboid family protein [Listeria monocytogenes FSL N1-017]
gi|332311779|gb|EGJ24874.1| Rhomboid family protein [Listeria monocytogenes str. Scott A]
Length = 518
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 223 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 282
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 283 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 342
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 343 SQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|284028038|ref|YP_003377969.1| Rhomboid family protein [Kribbella flavida DSM 17836]
gi|283807331|gb|ADB29170.1| Rhomboid family protein [Kribbella flavida DSM 17836]
Length = 246
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 39/136 (28%), Positives = 66/136 (48%), Gaps = 19/136 (13%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY 169
V+ + + WRL T + H + H+ +N+ L +G LEQ G +R +Y LS GG+
Sbjct: 99 VLVDSEPWRLFTSAFTHLQIFHIFSNLFMLYQVGPLLEQMLGRLRFVLLYFLSALGGSIA 158
Query: 170 LLFLFNAVSLLVLLAAALLTLV-VIIAINLAVG------------------ILPHVDNFA 210
+ L N VS + + A+L LV ++ I+ A G + P++
Sbjct: 159 VWLLANPVSSTLGASGAVLGLVGALLVISRARGMDVTWILAYVAITAVISFLFPNISWQG 218
Query: 211 HIGGFMAGFLLGFVLL 226
H+GGF+AG + ++ L
Sbjct: 219 HLGGFLAGAAIAWLFL 234
>gi|403252324|ref|ZP_10918634.1| Rhomboid family protein [Thermotoga sp. EMP]
gi|402812337|gb|EJX26816.1| Rhomboid family protein [Thermotoga sp. EMP]
Length = 235
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/146 (30%), Positives = 75/146 (51%), Gaps = 29/146 (19%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF-GGAYYLLFLFN 175
+RLIT +++H G++H+L N +L + G+ +E +G + Y +G G +F +
Sbjct: 55 FRLITALFVHGGILHILFNSYALYYFGLIVEDIYGTEKFLVGYFFTGIVGNLATHVFYHD 114
Query: 176 AVS----------LLVLLAAAL-------------LTLVVIIAINLAVGILP--HVDNFA 210
+S + +L AA ++L+ II IN+ G LP +++N A
Sbjct: 115 TISVGASGAIFGLIGILFAAGFRKDTPFFMKPVTGMSLLPIILINVVYGFLPGTNINNAA 174
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAER 236
H+GGF++G LLG+ +RP F W R
Sbjct: 175 HLGGFLSGMLLGYT--MRP-FSWKRR 197
>gi|254824604|ref|ZP_05229605.1| rhomboid family protein [Listeria monocytogenes FSL J1-194]
gi|255520229|ref|ZP_05387466.1| rhomboid family protein [Listeria monocytogenes FSL J1-175]
gi|293593842|gb|EFG01603.1| rhomboid family protein [Listeria monocytogenes FSL J1-194]
Length = 518
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 223 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 282
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 283 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 342
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 343 SQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|419710435|ref|ZP_14237901.1| rhomboid family protein [Mycobacterium abscessus M93]
gi|382941267|gb|EIC65587.1| rhomboid family protein [Mycobacterium abscessus M93]
Length = 247
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V E + WR +T +LH G++H+ NMLSL IG LE+ FG R +Y + G +
Sbjct: 69 VAEGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAA 128
Query: 171 LFLF-NAV------SLLVLLAAALL----------TLVVIIAINLAVGI-LPHVDNFAHI 212
++L NAV ++ LL AAL+ T+++++ +N+ + I LP + H+
Sbjct: 129 MWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHM 188
Query: 213 GGFMAGFLLGFVLL 226
GG + G L LL
Sbjct: 189 GGLLFGVLSAGALL 202
>gi|86743118|ref|YP_483518.1| rhomboid-like protein [Frankia sp. CcI3]
gi|86569980|gb|ABD13789.1| Rhomboid-like protein [Frankia sp. CcI3]
Length = 275
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 67/140 (47%), Gaps = 19/140 (13%)
Query: 109 RVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAY 168
R+ + Q +RL+T +LHAGV+H+L NM +L +G +LE G R +++ GG
Sbjct: 106 RIAADDQYYRLLTAAFLHAGVLHILFNMYALYLLGFQLEAILGRARYLALFVAGALGGNT 165
Query: 169 YLLFLFNAVSLLVLLAAALLT------------------LVVIIAINLAVGI-LPHVDNF 209
L + ++ V + A+ +++++ INLA+ ++D +
Sbjct: 166 LSYVLGDGFTVSVGASTAIFAFFAAYYIIARRLRVDSRQILIVLGINLAITFSFSNIDKW 225
Query: 210 AHIGGFMAGFLLGFVLLLRP 229
H+GG G ++G + P
Sbjct: 226 GHLGGLAVGAIIGLIYAYVP 245
>gi|347525683|ref|YP_004832431.1| rhomboid family integral membrane protein [Lactobacillus ruminis
ATCC 27782]
gi|345284642|gb|AEN78495.1| rhomboid family integral membrane protein [Lactobacillus ruminis
ATCC 27782]
Length = 219
Score = 54.3 bits (129), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/86 (39%), Positives = 47/86 (54%), Gaps = 7/86 (8%)
Query: 81 LSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLV 140
++F +NP S L + GA + V + WRL+T ++LH G+ HL NML+L
Sbjct: 25 MTFAGGSQNP------SVLVRFGA-NFAPYVSNGEYWRLLTAMFLHIGLEHLALNMLTLY 77
Query: 141 FIGIRLEQQFGFVRVGFVYLLSGFGG 166
FIG LE G VR +YL+SG G
Sbjct: 78 FIGASLEPILGSVRFAVLYLVSGICG 103
>gi|397678270|ref|YP_006519805.1| Rhomboid protease gluP [Mycobacterium massiliense str. GO 06]
gi|395456535|gb|AFN62198.1| Rhomboid protease gluP [Mycobacterium massiliense str. GO 06]
Length = 287
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + + WR +T +LH G++H+ NMLSL IG LE+ FG R +Y + G +
Sbjct: 109 VAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAA 168
Query: 171 LFLF-NAV------SLLVLLAAALL----------TLVVIIAINLAVGI-LPHVDNFAHI 212
++L NAV ++ LL AAL+ T+++++ +N+ + I LP + H+
Sbjct: 169 MWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHM 228
Query: 213 GGFMAGFLLGFVLL 226
GG + G L LL
Sbjct: 229 GGLLFGVLSAGALL 242
>gi|256374174|ref|YP_003097834.1| rhomboid family protein [Actinosynnema mirum DSM 43827]
gi|255918477|gb|ACU33988.1| Rhomboid family protein [Actinosynnema mirum DSM 43827]
Length = 298
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 60/133 (45%), Gaps = 19/133 (14%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNA 176
WRL+T +LH GV H+ NM SL +G LE G R VYLLS GG+ +
Sbjct: 134 WRLVTSGFLHLGVTHIGLNMASLYILGRDLEPVLGRARFLAVYLLSLLGGSASVYLFEEV 193
Query: 177 VSLLVLLAAALLTLV------------------VIIAINLAVGI-LPHVDNFAHIGGFMA 217
VSL + A+ L+ IIAIN+ + LP++ H+GG
Sbjct: 194 VSLTAGASGAIYGLMGSLLVVLLRRRLNATPVLAIIAINVFLSFSLPNISILGHLGGIAV 253
Query: 218 GFLLGFVLLLRPQ 230
G + L+ P+
Sbjct: 254 GAAVTAALVYAPR 266
>gi|256763410|ref|ZP_05503990.1| membrane-associated serine protease [Enterococcus faecalis T3]
gi|256684661|gb|EEU24356.1| membrane-associated serine protease [Enterococcus faecalis T3]
Length = 230
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 56/193 (29%), Positives = 87/193 (45%), Gaps = 39/193 (20%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ V H+ WR IT I+LH G +H++ NM++L +IG ++E +G R +YLLS
Sbjct: 43 GAMVRPLVAQNHEYWRFITPIFLHIGFMHIILNMVTLYYIGAQVEAIYGHWRYLGIYLLS 102
Query: 163 GFGG--AYYLLFLFNAVS------LLVLLAA------------ALLTLV----VIIAINL 198
G G A + N+VS L L A A++ +V + I INL
Sbjct: 103 GIAGNIASFAFGTPNSVSAGASTALFGLFGAFVILGRHFRDNPAIMYMVQRYSMFIVINL 162
Query: 199 AVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
+ VD H+GG + G L+ A +P + ++H L
Sbjct: 163 LFNLFSSSVDMMGHVGGLIGGLLV------------ATAFAVPNRQEAFNKHERIMATLI 210
Query: 258 IVALVL--LIVGF 268
+ LV+ L++GF
Sbjct: 211 FIFLVVICLLLGF 223
>gi|302384591|ref|YP_003820413.1| rhomboid family protein [Clostridium saccharolyticum WM1]
gi|302195219|gb|ADL02790.1| Rhomboid family protein [Clostridium saccharolyticum WM1]
Length = 206
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 72/155 (46%), Gaps = 27/155 (17%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ V+ E + +RL+T +++H G+ H++ NML L +G LE+ G ++ YLL
Sbjct: 43 GAMYAPLVLEEGEYFRLLTSVFMHFGINHIMNNMLILFILGDNLERALGHIKYLLFYLLC 102
Query: 163 GFG----------GAYYLLFLFNAVSLLVLLAAALL----------------TLVVIIAI 196
G G G Y + A + + LL L+++IA
Sbjct: 103 GVGANVISIILNLGDYRSVVSAGASGAIFGVIGGLLYAVFINRGRLEDLSARQLIIMIAC 162
Query: 197 NLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQ 230
+L G VDN AHIGG G +LG +L +P+
Sbjct: 163 SLYFGFTSTGVDNAAHIGGLFFGIVLGILLYRKPR 197
>gi|312193973|ref|YP_004014034.1| rhomboid family protein [Frankia sp. EuI1c]
gi|311225309|gb|ADP78164.1| Rhomboid family protein [Frankia sp. EuI1c]
Length = 390
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 64/139 (46%), Gaps = 19/139 (13%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG---- 165
+ +H+ WRL+T +LH V+H+ NM +L +G +LE G VR ++ G
Sbjct: 217 IAQKHEYWRLVTAAFLHGSVLHIAFNMYALFLLGTQLEAILGRVRYLALFFACAIGGNTL 276
Query: 166 ------------GAYYLLFLFNAVSLLVLLAAALLT--LVVIIAINLAVGI-LPHVDNFA 210
GA +F F A L+ + T +++++ INL + + +D +
Sbjct: 277 SYVIHDEKAFSYGASTAIFGFFAAYYLIARRLRVNTNQILIVVGINLLITFSISGIDKWG 336
Query: 211 HIGGFMAGFLLGFVLLLRP 229
HIGG G +LG + P
Sbjct: 337 HIGGLATGVVLGLLYAYVP 355
>gi|89099491|ref|ZP_01172367.1| hypothetical protein B14911_19975 [Bacillus sp. NRRL B-14911]
gi|89085877|gb|EAR65002.1| hypothetical protein B14911_19975 [Bacillus sp. NRRL B-14911]
Length = 196
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 82/163 (50%), Gaps = 27/163 (16%)
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
P+F P+S ++L + + + E + WRL T I++H+G H+L N SLV G LE+
Sbjct: 35 PVF-PNSYIFERLAGV--NLFIREGEVWRLATPIFMHSGFTHVLFNSFSLVLFGPALERI 91
Query: 150 FGFVRVGFVYLLSGF-------------------GGAYYLLF-LFNAVSLLV--LLAAAL 187
G + +YL++G GA + LF F AV+ L++
Sbjct: 92 AGKAKFAGIYLITGISANVATLLLEPLTYTHVGSSGAIFGLFGFFAAVAYFRKDLMSREN 151
Query: 188 LTLVVIIAIN--LAVGILPHVDNFAHIGGFMAGFLLGFVLLLR 228
+++ IA+ + I P+++ AHI GF++GFL+G + L R
Sbjct: 152 SQIIITIAVIGLIMTFIQPNINISAHIFGFISGFLIGALSLKR 194
>gi|300781971|ref|YP_003762262.1| hypothetical protein AMED_0036 [Amycolatopsis mediterranei U32]
gi|384145172|ref|YP_005527988.1| hypothetical protein RAM_00180 [Amycolatopsis mediterranei S699]
gi|399533854|ref|YP_006546515.1| hypothetical protein AMES_0034 [Amycolatopsis mediterranei S699]
gi|299791485|gb|ADJ41860.1| conserved hypothetical protein [Amycolatopsis mediterranei U32]
gi|340523326|gb|AEK38531.1| hypothetical protein RAM_00180 [Amycolatopsis mediterranei S699]
gi|398314624|gb|AFO73571.1| hypothetical protein AMES_0034 [Amycolatopsis mediterranei S699]
Length = 266
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 78/168 (46%), Gaps = 26/168 (15%)
Query: 86 LKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIR 145
L +N L SS Q GAL D + + WR++T +LH G IH+ NM SL +G
Sbjct: 58 LNDNDL----SSAFQH-GALYGDATLGHGEWWRILTNGFLHYGPIHIAVNMFSLWMMGRS 112
Query: 146 LEQQFGFVRVGFVYLLSGFGGAYYLLFLFN----------AVSLLVLLAAALLT------ 189
LEQ G R +Y +S G + +L N + +L L+ A +T
Sbjct: 113 LEQVCGRGRFLALYFVSMLGASASVLLFGNPGGYPGTVGASGALFGLMGAYAVTVLKLRL 172
Query: 190 ----LVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L++ +A+N + +P + F HIGG + G L+ LL P+ G
Sbjct: 173 NPTGLIITLALNAFITFGIPGISIFGHIGGLVTGALVTVALLYAPEVG 220
>gi|346306942|ref|ZP_08849090.1| hypothetical protein HMPREF9457_00799 [Dorea formicigenerans
4_6_53AFAA]
gi|345907306|gb|EGX77017.1| hypothetical protein HMPREF9457_00799 [Dorea formicigenerans
4_6_53AFAA]
Length = 199
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 84/172 (48%), Gaps = 34/172 (19%)
Query: 77 FLGRLSFEPLKENPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANM 136
FLG LSF + E+ F + + GA+ +++ + + LIT ++LH G HL+ NM
Sbjct: 22 FLG-LSFMGMTEDSAF------MMEHGAMYVPYLMNGERYYTLITSMFLHFGFSHLMNNM 74
Query: 137 LSLVFIGIRLEQQFGFVRVGFVYLLSGF------------GGAYYLL-----FLFNAVSL 179
+ L+ IG LE + G +R F+YL SG G+Y + +F V
Sbjct: 75 VMLLVIGYSLEPEIGKIRFLFIYLGSGLMGNLVSAWFDVSQGSYAVSAGASGAIFGIVGA 134
Query: 180 LVLLA---------AALLTLVVIIAINLAVGILPH-VDNFAHIGGFMAGFLL 221
L+ +A + LV++ ++L G VDN AHIGG ++GFLL
Sbjct: 135 LLYVAIRNHGRVGEISTRGLVLMAGLSLYYGFTAQGVDNAAHIGGLISGFLL 186
>gi|387760478|ref|YP_006067455.1| peptidase, S54 family [Streptococcus salivarius 57.I]
gi|339291245|gb|AEJ52592.1| peptidase, S54 family [Streptococcus salivarius 57.I]
Length = 224
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 72/148 (48%), Gaps = 24/148 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQG-WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S +L K+GA+ V + WRL+T I++H GV H L NML+L F+G E FG +
Sbjct: 36 SPLSLFKMGAMYGAFVQYSPLNLWRLVTPIFVHIGVEHFLFNMLALYFMGKMAEHIFGTL 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL---------------TLV 191
R +YLL+G G A+ LLF N + SL L AA ++ +
Sbjct: 96 RFLGLYLLAGVMGNAFTLLFTPNVIAAGASTSLFGLFAAVVILGYYSHSPLLNQLGRNYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAG 218
+I INL + P V H+GG + G
Sbjct: 156 ALIVINLIFNLFTPSVGITGHLGGLVGG 183
>gi|169627133|ref|YP_001700782.1| rhomboid family protein [Mycobacterium abscessus ATCC 19977]
gi|169239100|emb|CAM60128.1| Rhomboid family protein [Mycobacterium abscessus]
Length = 287
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + + WR +T +LH G++H+ NMLSL IG LE+ FG R +Y + G +
Sbjct: 109 VAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAA 168
Query: 171 LFLF-NAV------SLLVLLAAALL----------TLVVIIAINLAVGI-LPHVDNFAHI 212
++L NAV ++ LL AAL+ T+++++ +N+ + I LP + H+
Sbjct: 169 MWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHM 228
Query: 213 GGFMAGFLLGFVLL 226
GG + G L LL
Sbjct: 229 GGLLFGVLSAGALL 242
>gi|320095206|ref|ZP_08026910.1| rhomboid family protein [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977858|gb|EFW09497.1| rhomboid family protein [Actinomyces sp. oral taxon 178 str. F0338]
Length = 293
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/134 (30%), Positives = 68/134 (50%), Gaps = 24/134 (17%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF---- 172
W ++T +LH+G +H+ NML+L ++G +E+ G R G V L+S GG+ ++
Sbjct: 117 WIVVTSAFLHSGFLHVFFNMLTLYWVGSVVERAIGHWRYGAVCLISALGGSALVMLWCFV 176
Query: 173 ------------------LFNAVSLLVLLA-AALLTLVVIIAINLAVGIL-PHVDNFAHI 212
LF AV +L L+ ++ +++++ +NL G P V AHI
Sbjct: 177 QPEALFAATVGASGAVFGLFGAVFVLQRLSGSSTAPILILLGVNLVYGFANPGVSWQAHI 236
Query: 213 GGFMAGFLLGFVLL 226
GGF+AG + LL
Sbjct: 237 GGFLAGAAATWALL 250
>gi|422409553|ref|ZP_16486514.1| rhomboid family protein [Listeria monocytogenes FSL F2-208]
gi|313608952|gb|EFR84701.1| rhomboid family protein [Listeria monocytogenes FSL F2-208]
Length = 518
Score = 53.9 bits (128), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 223 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 282
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 283 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 342
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 343 SQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|290893553|ref|ZP_06556536.1| rhomboid family protein [Listeria monocytogenes FSL J2-071]
gi|290556898|gb|EFD90429.1| rhomboid family protein [Listeria monocytogenes FSL J2-071]
Length = 518
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 223 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 282
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 283 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 342
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 343 SQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|255282943|ref|ZP_05347498.1| putative small hydrophobic molecule transporter protein [Bryantella
formatexigens DSM 14469]
gi|255266482|gb|EET59687.1| peptidase, S54 family [Marvinbryantia formatexigens DSM 14469]
Length = 205
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 57/180 (31%), Positives = 79/180 (43%), Gaps = 39/180 (21%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ + GA+ V + + +RL TC++LH G HL NML L F G LE++ G VR
Sbjct: 39 DAEQMLSYGAMYPPYVTQKGEYYRLFTCMFLHFGWQHLFYNMLLLWFAGDMLEERSGPVR 98
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSLLVLLAA---------ALLTLVV------------- 192
+YL G G L FL +V A AL+ LVV
Sbjct: 99 YLVIYLAGGVAGN-VLSFLTGMERQVVSAGASGAVFAVIGALVWLVVKNRGKVEGIDNRG 157
Query: 193 ---IIAINLAVGILPH-VDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSR 248
+ ++LA G + VD+ AH+GGF+ GFLL VL + P+ R K R
Sbjct: 158 LCMMAVLSLAQGFMDAGVDHMAHLGGFIGGFLLAAVL------------RTPSAVRRKDR 205
>gi|423219507|ref|ZP_17206003.1| hypothetical protein HMPREF1061_02776 [Bacteroides caccae
CL03T12C61]
gi|392625402|gb|EIY19471.1| hypothetical protein HMPREF1061_02776 [Bacteroides caccae
CL03T12C61]
Length = 584
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ L K GA ++ + WR ITC ++H G HLL NM + ++IG+ LE
Sbjct: 179 ILEPSTLALLKWGA-DFGPLTLTGDWWRAITCNFIHIGAFHLLMNMYAFMYIGLWLEDLI 237
Query: 151 GFVRVGFVYLLSGFGGAYYLLFL---------------FNAVSLLVLL---------AAA 186
G R+ YLL+G A + L++ + L LL A
Sbjct: 238 GTRRMFISYLLTGVCSAAFSLYMHAETISAGASGAIFGLYGIFLAFLLFHHIPRAQRKAL 297
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHI 212
L+++++ + NL G+ +DN AHI
Sbjct: 298 LISILLFVGYNLVYGMKAGIDNAAHI 323
>gi|381208752|ref|ZP_09915823.1| hypothetical protein LGrbi_02305 [Lentibacillus sp. Grbi]
Length = 252
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 54/169 (31%), Positives = 81/169 (47%), Gaps = 27/169 (15%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AY 168
+ + Q WRLIT I+LHAG++H+L N +LV G LEQ G V+ YL +G G A
Sbjct: 55 ISQGQYWRLITSIFLHAGLMHVLFNSFALVLFGPALEQMLGKVKFITAYLGAGLIGNLAT 114
Query: 169 YLL---------------FLFNAVSLLVLLAAALL--TLVVIIAINLAVGIL-----PHV 206
+LL LF + +V L+ + II I L +G++ +
Sbjct: 115 FLLGPALYSHVGASGAIYGLFGIYAFMVAFRKHLIDPSSSQIITIILVIGLIMTFVRSGI 174
Query: 207 DNFAHIGGFMAGFLLGFVLL--LRPQFGWAERHQLPAQARVKSRHNPYQ 253
+ +AH+ GF+ GF L ++L +RP W R Q V+ N +Q
Sbjct: 175 NIYAHVFGFIGGFALAPLILNNVRPYSPWLRR-QYVDDGSVQFDPNRWQ 222
>gi|404407774|ref|YP_006690489.1| rhomboid family protein [Listeria monocytogenes SLCC2376]
gi|404241923|emb|CBY63323.1| rhomboid family protein [Listeria monocytogenes SLCC2376]
Length = 512
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 217 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 276
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 277 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 336
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 337 SQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|422809417|ref|ZP_16857828.1| rhomboid family protein [Listeria monocytogenes FSL J1-208]
gi|378753031|gb|EHY63616.1| rhomboid family protein [Listeria monocytogenes FSL J1-208]
Length = 518
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 223 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 282
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 283 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 342
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 343 SQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|291540429|emb|CBL13540.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Roseburia intestinalis XB6B4]
Length = 348
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 69/140 (49%), Gaps = 29/140 (20%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG---AYYL 170
HQ WR+ T +++H G+ HL+ NM+ +G RLE+ G ++ +Y+LSG GG +Y++
Sbjct: 202 HQWWRIFTAMFIHFGLPHLVNNMVIFCCVGSRLERAAGHFKMFVIYMLSGIGGGLLSYFM 261
Query: 171 LF--------------LFNAVSLLVL-----------LAAALLTLVVIIAINLAVGILPH 205
+ +F + L+ L + L+ ++++ +
Sbjct: 262 MLYSGDYAVSAGASGAVFGTIGGLIWVVIRHRGRFKGLTVKGMILMAVLSLYYGFSTIG- 320
Query: 206 VDNFAHIGGFMAGFLLGFVL 225
+DN+ H+GG + GFL+ +L
Sbjct: 321 IDNWCHVGGILTGFLVAMIL 340
>gi|153808412|ref|ZP_01961080.1| hypothetical protein BACCAC_02706 [Bacteroides caccae ATCC 43185]
gi|149128734|gb|EDM19951.1| peptidase, S54 family [Bacteroides caccae ATCC 43185]
Length = 584
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 68/146 (46%), Gaps = 25/146 (17%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ L K GA ++ + WR ITC ++H G HLL NM + ++IG+ LE
Sbjct: 179 ILEPSTLALLKWGA-DFGPLTLTGDWWRAITCNFIHIGAFHLLMNMYAFMYIGLWLEDLI 237
Query: 151 GFVRVGFVYLLSGFGGAYYLLFL---------------FNAVSLLVLL---------AAA 186
G R+ YLL+G A + L++ + L LL A
Sbjct: 238 GTRRMFISYLLTGVCSAAFSLYMHAETISAGASGAIFGLYGIFLAFLLFHHIPRAQRKAL 297
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHI 212
L+++++ + NL G+ +DN AHI
Sbjct: 298 LISILLFVGYNLVYGMKAGIDNAAHI 323
>gi|45658531|ref|YP_002617.1| hypothetical protein LIC12696 [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|421085386|ref|ZP_15546239.1| peptidase, S54 family [Leptospira santarosai str. HAI1594]
gi|421103683|ref|ZP_15564280.1| peptidase, S54 family [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|45601774|gb|AAS71254.1| conserved hypothetical protein [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|410366646|gb|EKP22037.1| peptidase, S54 family [Leptospira interrogans serovar
Icterohaemorrhagiae str. Verdun LP]
gi|410432022|gb|EKP76380.1| peptidase, S54 family [Leptospira santarosai str. HAI1594]
gi|456984467|gb|EMG20522.1| peptidase, S54 family [Leptospira interrogans serovar Copenhageni
str. LT2050]
Length = 239
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/167 (30%), Positives = 76/167 (45%), Gaps = 32/167 (19%)
Query: 92 FGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
F P +L + GA +R + G WRL+T +++HAG HL N L+ I +E
Sbjct: 76 FYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHAGFPHLFFNGFGLIISAIFVEPI 132
Query: 150 FGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA-------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 133 LGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFPRDDKKN 192
Query: 186 ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN AHIGG ++G L G +L QFG
Sbjct: 193 VLIMIVTFILTGLLWGLFGGIDNAAHIGGLVSGTLSGIILF---QFG 236
>gi|417846854|ref|ZP_12492838.1| peptidase, S54 family [Streptococcus mitis SK1073]
gi|339457974|gb|EGP70527.1| peptidase, S54 family [Streptococcus mitis SK1073]
Length = 224
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 31/174 (17%)
Query: 96 SSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ TL + GA+ + + Q WRL + I++H G H + NMLSL ++G ++E+ FG +
Sbjct: 37 ADTLFRFGAMYGPVIRLFPEQIWRLFSAIFVHIGWEHFIVNMLSLYYLGRQVEEIFGSKQ 96
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSL-------LVLLAAALLTL----------------V 191
F+YLLSG G + +F+F+ SL L L AA++ L +
Sbjct: 97 FFFLYLLSGMMGNLF-VFVFSPKSLAAGASTSLYGLFAAIIVLRYATRNPYIQQLGQSYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+ +N+ +L P + HIGG + G L + +R ER A R
Sbjct: 156 TLFVVNIIGSVLIPGISLAGHIGGAVGGAFLAIIFPVR-----GERRMYSASQR 204
>gi|328957643|ref|YP_004375029.1| membrane endopeptidase [Carnobacterium sp. 17-4]
gi|328673967|gb|AEB30013.1| membrane endopeptidase [Carnobacterium sp. 17-4]
Length = 229
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 97 STLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVG 156
+TL K GA +++ + + WRLIT ++LH G IHLL N + L ++G +LE FG +R
Sbjct: 37 ATLIKYGA-KFNPYIVLGEWWRLITPMFLHIGFIHLLMNSVILYYLGEQLEGMFGHLRFA 95
Query: 157 FVYLLSGFGG 166
+YLLSG G
Sbjct: 96 GIYLLSGIAG 105
>gi|374313630|ref|YP_005060060.1| Peptidase S54, rhomboid domain protein [Granulicella mallensis
MP5ACTX8]
gi|358755640|gb|AEU39030.1| Peptidase S54, rhomboid domain protein [Granulicella mallensis
MP5ACTX8]
Length = 225
Score = 53.9 bits (128), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 66/148 (44%), Gaps = 28/148 (18%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYY 169
V HQ WRL+T +LH G+IH+ NM L IG +E FG +R +Y +G GG+
Sbjct: 64 TVGAHQWWRLLTSCFLHFGIIHIGFNMYVLFQIGPFIEMAFGRIRYLLIYFFAGLGGSLV 123
Query: 170 ----------------LLFLFNAVSLLVLLAAALLTLVVIIAINLAVGIL---------- 203
+ L+ AV +L L V +I + GI
Sbjct: 124 SVWVHPMVVGAGASGAIFGLYGAVFGFLLRNRRSLDPAVTKSIAKSAGIFVLYNVVYGSI 183
Query: 204 -PHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
D AH GG + GF++G +LL+RP+
Sbjct: 184 TRTTDLSAHFGGLVTGFVVG-MLLIRPR 210
>gi|304403852|ref|ZP_07385514.1| Rhomboid family protein [Paenibacillus curdlanolyticus YK9]
gi|304346830|gb|EFM12662.1| Rhomboid family protein [Paenibacillus curdlanolyticus YK9]
Length = 204
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/168 (28%), Positives = 74/168 (44%), Gaps = 35/168 (20%)
Query: 98 TLQKLGAL--EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRV 155
TL + GA D + WR +T I+LHAG +HL N++SL+ LE+ G VR
Sbjct: 44 TLYRFGAFLQTEDDPFGLDEPWRYVTAIFLHAGFMHLFYNLISLIIFAPPLERLLGHVRY 103
Query: 156 GFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALL-----------------------TLVV 192
G ++++G G + + L V + A+ T+
Sbjct: 104 GLFFIVTGVVGNLFSALFHHGEVLSVGASGAIYGVYGAFLFLSVFGKHRLDEGSRKTVYS 163
Query: 193 IIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQL 239
I+ L L P ++ +AH+GG +AGF+L +GW ER QL
Sbjct: 164 ILIFGLIYSFLVPTINIWAHVGGGIAGFVL---------YGWFERKQL 202
>gi|217964517|ref|YP_002350195.1| rhomboid family protein [Listeria monocytogenes HCC23]
gi|386026709|ref|YP_005947485.1| hypothetical protein LMM7_1422 [Listeria monocytogenes M7]
gi|217333787|gb|ACK39581.1| rhomboid family protein [Listeria monocytogenes HCC23]
gi|336023290|gb|AEH92427.1| hypothetical protein LMM7_1422 [Listeria monocytogenes M7]
Length = 518
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 223 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 282
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 283 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 342
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 343 SQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|386008108|ref|YP_005926386.1| rhomboid family protein [Listeria monocytogenes L99]
gi|307570918|emb|CAR84097.1| rhomboid family protein [Listeria monocytogenes L99]
Length = 512
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++HL +N + L +G E+ +G R + LL G
Sbjct: 217 KFNPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 276
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 277 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 336
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 337 SQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|315446599|ref|YP_004079478.1| hypothetical protein Mspyr1_51170 [Mycobacterium gilvum Spyr1]
gi|315264902|gb|ADU01644.1| uncharacterized membrane protein [Mycobacterium gilvum Spyr1]
Length = 279
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 76/159 (47%), Gaps = 24/159 (15%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+S LQ+ L W V + + +RL+T +LH G+ HL NML+L F+G LE G R
Sbjct: 86 ASPGLQRAFGL-WSPAVADGEMYRLLTSAFLHFGLTHLAFNMLALYFVGPPLEAALGRAR 144
Query: 155 VGFVYLLSGFGGAYYL-LFLFNAVS------LLVLLAAALL----------TLVVIIAIN 197
+YL+S GG+ + L FNA++ + L A + +++ II +N
Sbjct: 145 FVTLYLVSALGGSVLVYLLTFNALTAGASGAVFGLFGATFVVGRKLNMDVRSVMAIIVLN 204
Query: 198 LAVGIL------PHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
LA L ++ HIGG + G L+ + P+
Sbjct: 205 LAFTFLIPLFTSQNISWQGHIGGLVTGALVAAAFVYAPR 243
>gi|255690223|ref|ZP_05413898.1| peptidase, S54 family [Bacteroides finegoldii DSM 17565]
gi|260624242|gb|EEX47113.1| peptidase, S54 family [Bacteroides finegoldii DSM 17565]
Length = 584
Score = 53.9 bits (128), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 151 GFVRVGFVYLLSGFGGAYY------------------------LLFLFNAVSLLVLLAAA 186
G R+ YLL+G A + L FLF A
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
L ++++ + NL G+ +DN AHIGG ++GFLLG + + +F A+ +
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFLLGIIYVCSYKFEKADAQR 347
>gi|170761626|ref|YP_001785737.1| membrane associated peptidase [Clostridium botulinum A3 str. Loch
Maree]
gi|169408615|gb|ACA57026.1| putative membrane associated peptidase [Clostridium botulinum A3
str. Loch Maree]
Length = 341
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 25/165 (15%)
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
+F L LGA + + ++ + +RLIT ++LH G+IHL NM +L IG +E
Sbjct: 177 SIFTSDIKVLIFLGA-KVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNAIGPLVEIY 235
Query: 150 FGFVRVGFVYLLSGFGGAYYLLFLFNAV-------SLLVLLAAALL-------------- 188
FG V+ +Y +SG +Y+ +LF+A ++ +L A L+
Sbjct: 236 FGKVKYLIIYFISGILSSYF-SYLFSASVSIGASGAIFGILGATLIIAYTNRKKGGKEFL 294
Query: 189 -TLVVIIAINLAVGI-LPHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
++ +I +NL +G +P+VDNF HIGG + G ++ VL L +
Sbjct: 295 NNIISVIVVNLILGFSIPNVDNFGHIGGLIGGVIITLVLFLSDDY 339
>gi|323490567|ref|ZP_08095773.1| hypothetical protein GPDM_14436 [Planococcus donghaensis MPA1U2]
gi|323395833|gb|EGA88673.1| hypothetical protein GPDM_14436 [Planococcus donghaensis MPA1U2]
Length = 202
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/135 (34%), Positives = 62/135 (45%), Gaps = 23/135 (17%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
+ E Q WR T ++LH GV+HLL NM SL G LE+ G VR +YLL+GF +
Sbjct: 52 IAEGQWWRFFTPMFLHNGVMHLLFNMFSLFLFGPELERLTGKVRFTTIYLLAGFFASAAT 111
Query: 171 LFL-----------------FNAVSLLVLLAAALL------TLVVIIAINLAVGILPHVD 207
FL F A LV L L +I+ + + P+V+
Sbjct: 112 YFLQPLDYFHVGASGAIFGVFGAFGALVYYGGRALPQLKQIILPIIVISIVMTFLTPNVN 171
Query: 208 NFAHIGGFMAGFLLG 222
AHI G + GFL+G
Sbjct: 172 VTAHIAGMITGFLIG 186
>gi|89894371|ref|YP_517858.1| hypothetical protein DSY1625 [Desulfitobacterium hafniense Y51]
gi|219668797|ref|YP_002459232.1| rhomboid family protein [Desulfitobacterium hafniense DCB-2]
gi|423073963|ref|ZP_17062698.1| peptidase, S54 family [Desulfitobacterium hafniense DP7]
gi|89333819|dbj|BAE83414.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219539057|gb|ACL20796.1| Rhomboid family protein [Desulfitobacterium hafniense DCB-2]
gi|361855174|gb|EHL07168.1| peptidase, S54 family [Desulfitobacterium hafniense DP7]
Length = 327
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 73/143 (51%), Gaps = 22/143 (15%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
+ ++ + + WRL T ++LH G +HL N+ +L +G E+ G VR VY+LSG G+
Sbjct: 185 NALIIQGEYWRLFTSMFLHIGFLHLAFNLYALWALGAIAEELLGRVRYITVYILSGILGS 244
Query: 168 YYLLFLFNAVS------LLVLLAAALL---------------TLVVIIAINLAVGILPH- 205
F +A+S + +L A ++ +L V++ INL +G
Sbjct: 245 VASFFFTDAISAGASGAIFGILGALVVYSRRKPFLWKSGFGKSLAVVVLINLGLGFFQTG 304
Query: 206 VDNFAHIGGFMAGFLLGFVLLLR 228
+D +AH+GG + G L +++ ++
Sbjct: 305 IDVYAHLGGLVTGMLFTWLISMK 327
>gi|298480750|ref|ZP_06998946.1| S54 family peptidase [Bacteroides sp. D22]
gi|298273184|gb|EFI14749.1| S54 family peptidase [Bacteroides sp. D22]
Length = 584
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 151 GFVRVGFVYLLSGFGGAYY------------------------LLFLFNAVSLLVLLAAA 186
G R+ YLL+G A + L FLF A
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
L ++++ + NL G+ +DN AHIGG ++GFLLG + + +F A+ +
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFLLGIIYVCSYKFEKADAQR 347
>gi|17549744|ref|NP_523084.1| hypothetical protein RS04802 [Ralstonia solanacearum GMI1000]
gi|17431999|emb|CAD18676.1| probable membrane transmembrane protein [Ralstonia solanacearum
GMI1000]
Length = 569
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 30/168 (17%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
NPL P+ G ++ V + + WRL++ +LHAGV+HL NM+ L G+ +E+
Sbjct: 228 NPLQTPTDVLFNLGGNAAFE--VQQGEWWRLLSATFLHAGVLHLAVNMIGLYAAGVTVER 285
Query: 149 QFGFVRVGFVYLLSGF-GGAYYLLFLFNAV-------------------------SLLVL 182
+G V +YL +G G A L F +
Sbjct: 286 IYGPVAYLLIYLGAGLLGSALSLSFAAQHAIGVGASGAVFGVAGAWLVAIRQYRGRMPET 345
Query: 183 LAAALLTLV-VIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLR 228
L+ LLT + + + +L G+ P VDN AH+GG + G LL +L R
Sbjct: 346 LSKRLLTQIGLFVLYSLVQGLTKPGVDNAAHVGGLIGGCLLACILPAR 393
>gi|336406188|ref|ZP_08586849.1| hypothetical protein HMPREF0127_04162 [Bacteroides sp. 1_1_30]
gi|335935437|gb|EGM97389.1| hypothetical protein HMPREF0127_04162 [Bacteroides sp. 1_1_30]
Length = 584
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 151 GFVRVGFVYLLSGFGGAYY------------------------LLFLFNAVSLLVLLAAA 186
G R+ YLL+G A + L FLF A
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
L ++++ + NL G+ +DN AHIGG ++GFLLG + + +F A+ +
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFLLGIIYVCSYKFEKADAQR 347
>gi|227510498|ref|ZP_03940547.1| S54 family peptidase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
gi|227190150|gb|EEI70217.1| S54 family peptidase [Lactobacillus brevis subsp. gravesensis ATCC
27305]
Length = 234
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 89/193 (46%), Gaps = 40/193 (20%)
Query: 70 GRGCVARFLGRLSFEPLKENPLFG---------------PSSSTLQKLGALEWDRVVHEH 114
G+G ++ F+GRL +P L G + + L + GA +++ ++
Sbjct: 8 GKGEIS-FMGRLRDKPYMTYALLGIMVLVYLLMTISGGTENVANLVRFGA-KYNPLIRAG 65
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF---------- 164
+ WRL+T I++H G H+L N ++L FIG +E FG R ++L SG
Sbjct: 66 EYWRLLTPIFIHIGFTHILMNGITLYFIGQYVETLFGHWRFLLIFLASGIAGNLASFAFS 125
Query: 165 -----GGAYYLLFLFNAVSLL-------VLLAAALLTLVVIIAINLAVGI-LPHVDNFAH 211
G + + LF A +L + + T ++ I +N+A I + +D H
Sbjct: 126 PSLSAGASTSIFGLFGAFMMLGESFSRNQAIVSMARTFLLFIVLNIATDIFVSGIDIAGH 185
Query: 212 IGGFMAGFLLGFV 224
+GG + GFL+ +V
Sbjct: 186 LGGLVGGFLIAYV 198
>gi|407641198|ref|YP_006804957.1| putative membrane-bound rhomboid protease [Nocardia brasiliensis
ATCC 700358]
gi|407304082|gb|AFT97982.1| putative membrane-bound rhomboid protease [Nocardia brasiliensis
ATCC 700358]
Length = 235
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 21/153 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + Q WR++ +LH G IHLL NM +L IG E G +R VYL+S GGA +
Sbjct: 61 VADGQWWRVLGSGFLHYGPIHLLLNMFALYVIGRDAELVLGRLRYLSVYLVSLLGGAAAV 120
Query: 171 LF----------------LFNAVS-LLVLLAAALLTLVVIIAINLAVGI-LPHVDNFAHI 212
+ LF A++ +L+ L ++++IAIN+ + LP + + H+
Sbjct: 121 MVFAQDSATAGASGAVYGLFGAITVILIRLRQNPNQMLILIAINVFISFSLPGISLWGHL 180
Query: 213 GGFMAGFLLGFVLLLRPQFGWAERHQLPAQARV 245
GG AG L +L P GW R + P AR+
Sbjct: 181 GGLAAGTLATLGILFLP--GW-LRAKSPQAARL 210
>gi|295085069|emb|CBK66592.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Bacteroides xylanisolvens XB1A]
Length = 584
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEDLI 235
Query: 151 GFVRVGFVYLLSGFGGAYY------------------------LLFLFNAVSLLVLLAAA 186
G R+ YLL+G A + L FLF A
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
L ++++ + NL G+ +DN AHIGG ++GFLLG + + +F A+ +
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFLLGIIYVCSYKFEKADAQR 347
>gi|422012514|ref|ZP_16359194.1| peptidase, S54 family [Actinomyces georgiae F0490]
gi|394755698|gb|EJF38895.1| peptidase, S54 family [Actinomyces georgiae F0490]
Length = 305
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/149 (30%), Positives = 73/149 (48%), Gaps = 27/149 (18%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF---- 172
W ++T +LH+G +H+ NML+L ++G +E+ G R G V L+S GG+ ++
Sbjct: 129 WIVVTSAFLHSGFLHVFFNMLTLYWVGSVVERAIGHWRYGAVCLISALGGSALVMLWCFV 188
Query: 173 ------------------LFNAVSLLVLLA-AALLTLVVIIAINLAVGIL-PHVDNFAHI 212
LF AV +L L+ ++ +++++ INL G P V AHI
Sbjct: 189 QPAALFAATVGASGAVFGLFGAVFVLQRLSGSSTAPILILLGINLVYGFANPGVSWQAHI 248
Query: 213 GGFMAGFLLGFVLLL---RPQFGWAERHQ 238
GGF+AG + LL RP A R +
Sbjct: 249 GGFLAGAAATWALLRTSGRPGGALAPRAK 277
>gi|343525241|ref|ZP_08762196.1| peptidase, S54 family [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|418966282|ref|ZP_13518029.1| peptidase, S54 family [Streptococcus constellatus subsp.
constellatus SK53]
gi|343395511|gb|EGV08049.1| peptidase, S54 family [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|383340448|gb|EID18744.1| peptidase, S54 family [Streptococcus constellatus subsp.
constellatus SK53]
Length = 226
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 76/149 (51%), Gaps = 23/149 (15%)
Query: 95 SSSTLQKLGALEWDRVVH-EHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S+ T+ + GA+ + + Q WRL++ I++H G+ H + NM++L FIG + E FG
Sbjct: 36 STQTIYEFGAMHGRSIQYFPSQIWRLVSAIFVHIGLEHFVMNMITLYFIGRQAEDIFGSW 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAVSL-----LVLLAAALLTL----------------V 191
F+YL+SG G A+ F +AV+ L + A++TL +
Sbjct: 96 NFLFLYLMSGILGNAFVFFFTPSAVAAGASTSLFGIFGAIITLRYAVHNPYIQQLGQSYL 155
Query: 192 VIIAINLAVGILPHVDNFAHIGGFMAGFL 220
+++ +NL + + P + H+GG + G L
Sbjct: 156 ILLVMNLVLSLTPGISLAGHLGGAVGGAL 184
>gi|116292571|gb|ABJ97617.1| rhomboid-4 [synthetic construct]
Length = 796
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 32/153 (20%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
LG L + + + + +RL ++LH G +H+L N++ + I +E +G +R G ++ +
Sbjct: 482 LGGLNTNYIRNYGELYRLFWSMYLHGGFMHILFNVICQIQILWMIEPDWGSIRTGLLFFI 541
Query: 162 SGFGG----------------------------AYYLLFLFNAVSLLVLLAAALLTLVVI 193
SG G AYY+ + + L+ + ++
Sbjct: 542 SGVTGNLLSAVCDPCGVTIGSSGSLYGLIGALFAYYIEYW----KTIPRPCCVLIFMFLV 597
Query: 194 IAINLAVGILPHVDNFAHIGGFMAGFLLGFVLL 226
+ + VG+ + DN+AHIGG + G L GF +
Sbjct: 598 VMFGIIVGMFGYTDNYAHIGGCLGGVLFGFSTI 630
>gi|322797669|gb|EFZ19678.1| hypothetical protein SINV_10168 [Solenopsis invicta]
Length = 357
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 98/213 (46%), Gaps = 40/213 (18%)
Query: 115 QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS------------ 162
Q +RL T I+LHAG++HL+ +L F+ LE+ G +R+ +Y +
Sbjct: 150 QFYRLFTTIFLHAGIVHLIITLLIQYFLMRDLEKLTGSLRIALIYFIGALAGNLASAIFV 209
Query: 163 ------GFGGAYYLLFLFNAVSLL---VLLAAALLTL---VVIIAINLAVGILPHVDNFA 210
G GA++ L V +L +L TL ++I+ L +GILP +DN+A
Sbjct: 210 PYRAEVGPAGAHFALLATLVVEVLHCWPMLKHPRRTLSKLILILLGLLVLGILPWIDNYA 269
Query: 211 HIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
H+ GF+ GFL + L+ FG +R + +L I ++LIVG
Sbjct: 270 HLFGFIFGFLAAYALMPFISFGHYDRR---------------RKILLIWVCLILIVGLFA 314
Query: 271 GLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
L+ LF + C C +CVP ++ C +
Sbjct: 315 LLLALFYNVPVYE-CEVCKLFNCVPFTRDFCAS 346
>gi|392393767|ref|YP_006430369.1| hypothetical protein Desde_2230 [Desulfitobacterium dehalogenans
ATCC 51507]
gi|390524845|gb|AFM00576.1| putative membrane protein [Desulfitobacterium dehalogenans ATCC
51507]
Length = 275
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/143 (27%), Positives = 74/143 (51%), Gaps = 22/143 (15%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
+ ++ + + WRL T ++LH G +HL N+ +L +G E+ G +R VY+LSG G+
Sbjct: 133 NALIIQGEYWRLFTSMFLHIGFLHLAFNLYALWALGPIAEELLGRIRYITVYILSGILGS 192
Query: 168 YYLLFLFNAVS------LLVLLAAALL---------------TLVVIIAINLAVGILPH- 205
+A+S + +L A ++ +L V+I INL++G
Sbjct: 193 VASFLFTDAISAGASGAIFGILGALVVYSRRKPFLWKSGFGKSLAVVILINLSLGFFQTG 252
Query: 206 VDNFAHIGGFMAGFLLGFVLLLR 228
+D +AH+GG ++G LL ++ ++
Sbjct: 253 IDVYAHMGGLVSGMLLTWIFSMK 275
>gi|418018722|ref|ZP_12658277.1| hypothetical protein SSALIVM18_09407 [Streptococcus salivarius M18]
gi|345526164|gb|EGX29476.1| hypothetical protein SSALIVM18_09407 [Streptococcus salivarius M18]
Length = 224
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 50/148 (33%), Positives = 72/148 (48%), Gaps = 24/148 (16%)
Query: 95 SSSTLQKLGALEWDRVVHEHQG-WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
S +L K+GA+ V + WRL+T I++H G+ H L NML+L F+G E FG +
Sbjct: 36 SPLSLFKMGAMYGAFVQYSPLNLWRLVTPIFVHIGIEHFLFNMLALYFMGKMAEHIFGTL 95
Query: 154 RVGFVYLLSG-FGGAYYLLFLFNAV------SLLVLLAAALL---------------TLV 191
R +YLL+G G A+ LLF N + SL L AA ++ +
Sbjct: 96 RFLGLYLLAGVMGNAFTLLFTPNVIAAGASTSLFGLFAAVVILGYYSHSPLLNQLGRNYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAG 218
+I INL + P V H+GG + G
Sbjct: 156 ALIVINLIFNLFTPSVGITGHLGGLVGG 183
>gi|333992831|ref|YP_004525445.1| serine protease [Mycobacterium sp. JDM601]
gi|333488799|gb|AEF38191.1| serine protease [Mycobacterium sp. JDM601]
Length = 264
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 19/133 (14%)
Query: 107 WDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG 166
W V + Q +RL+T +LH G +HLL NM +L +G LE G R +YLLS GG
Sbjct: 91 WSPAVADGQLYRLLTSAFLHYGAMHLLLNMWALYVVGPPLEGLLGRSRFSALYLLSALGG 150
Query: 167 A--YYLLFLFNAVS------LLVLLAAALLT----------LVVIIAINLAVG-ILPHVD 207
+ YLL N + + L A L+ + II INL +P +
Sbjct: 151 SVTVYLLAPLNTATAGASGAIFGLFGATLIVGRRLQMDIGWVAAIIVINLVFTFTIPQIS 210
Query: 208 NFAHIGGFMAGFL 220
H+GG + G L
Sbjct: 211 WQGHVGGLVTGLL 223
>gi|320102400|ref|YP_004177991.1| rhomboid family protein [Isosphaera pallida ATCC 43644]
gi|319749682|gb|ADV61442.1| Rhomboid family protein [Isosphaera pallida ATCC 43644]
Length = 406
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 39/63 (61%)
Query: 105 LEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF 164
L+ V+++ Q WRLIT I+LH G HLL NML L FIG LE + G V+L+SG
Sbjct: 133 LDSQAVLNQFQVWRLITSIFLHEGPFHLLFNMLVLFFIGRILEHELGTREFVMVFLVSGL 192
Query: 165 GGA 167
G+
Sbjct: 193 VGS 195
>gi|293193637|ref|ZP_06609859.1| rhomboid family protein [Actinomyces odontolyticus F0309]
gi|292819869|gb|EFF78872.1| rhomboid family protein [Actinomyces odontolyticus F0309]
Length = 292
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 26/148 (17%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF---- 172
W ++T +LH G++H+L NMLSL ++G +E G R +YL+S GG+ ++L
Sbjct: 113 WTVLTGAFLHGGIMHILFNMLSLYWVGRAIEPVLGRWRFLTLYLVSALGGSAFILVWCLI 172
Query: 173 ------------------LFNAVSLLVLLAAALLT-LVVIIAINLAVG-ILPHVDNFAHI 212
LF AV +L L + T ++ ++ INL G ++ + HI
Sbjct: 173 QPSEIFVSTVGASGAVFGLFGAVFVLQRLGGSDTTAILTLLGINLVYGFMVSGISWQGHI 232
Query: 213 GGFMAGFLLGFVL--LLRPQFGWAERHQ 238
GG +AG +VL + RP+ G + HQ
Sbjct: 233 GGAIAGVGATWVLVHMARPRPGVTQVHQ 260
>gi|403238266|ref|ZP_10916852.1| S54 family peptidase [Bacillus sp. 10403023]
Length = 239
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/185 (26%), Positives = 90/185 (48%), Gaps = 32/185 (17%)
Query: 96 SSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRV 155
++ LQ++ + ++ ++ E + WRL+T I++H+G H+L N SLV G LE G V+
Sbjct: 40 TTLLQQM--IGFNFLISEGEYWRLVTPIFVHSGFGHMLFNSFSLVLFGPALESMLGKVKF 97
Query: 156 GFVYLLSGFG---GAYYL-------------------LFLFNAV---SLLVLLAAALLTL 190
VYLL+G YY+ ++L+ V L+ + A L+T
Sbjct: 98 TVVYLLTGVAANLATYYIEPLEFAHVGSSGAIFGLFGIYLYMVVFRKDLINHMNAQLITT 157
Query: 191 VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLR----PQFGWAERHQLPAQARVK 246
+++I + + I +V+ AH+ GF+AG ++ ++L + PQ A + R+
Sbjct: 158 ILVIGLVMTF-INSNVNIVAHLFGFLAGAIIAPLVLPKTSGQPQIMLAGDSSYRPRMRIP 216
Query: 247 SRHNP 251
+ P
Sbjct: 217 RQFTP 221
>gi|315302996|ref|ZP_07873713.1| rhomboid family protein, partial [Listeria ivanovii FSL F6-596]
gi|313628626|gb|EFR97042.1| rhomboid family protein [Listeria ivanovii FSL F6-596]
Length = 295
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 73/147 (49%), Gaps = 22/147 (14%)
Query: 107 WDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG 166
++ +++ + WR IT I+LH+G+IHL +N + L +G E+ +G R + +L G G
Sbjct: 1 FNPLIYAGEWWRFITPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYVLILILGGICG 60
Query: 167 --AYYLLFL---FNAVSLLVLLAAALLTLVV----------------IIAINLAVGIL-P 204
A + L + A + + + ALL LVV ++AINL + +
Sbjct: 61 NIASFTLNMNLSVGASTAVFAVMGALLYLVVLKPNIYAKTIGVSIASLVAINLLLDVFSS 120
Query: 205 HVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 121 QIDIAGHIGGLVGGFLLAGALSLPNQF 147
>gi|326792345|ref|YP_004310166.1| peptidase S9 prolyl oligopeptidase active site domain-containing
protein [Clostridium lentocellum DSM 5427]
gi|326543109|gb|ADZ84968.1| Peptidase S54, rhomboid domain [Clostridium lentocellum DSM 5427]
Length = 518
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/185 (28%), Positives = 83/185 (44%), Gaps = 45/185 (24%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG---- 163
+ ++ E + WR IT I+LH ++HLL N SL IG +E+ +G R YL++G
Sbjct: 222 NNLILEGEYWRFITPIFLHGSLMHLLVNCYSLYIIGSLVERLYGRGRFITSYLIAGILGN 281
Query: 164 ------------------FGGAYYLLF--LFNAVSLLVLLAAALLTLVVIIAINLAVGIL 203
FG LL+ L + V ++++T ++ INL G
Sbjct: 282 LCSFLFVPGPSVGASGAIFGLMGILLYFGLERPLQFKVYFGSSIITTIL---INLVYGFS 338
Query: 204 PH-VDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALV 262
+DNFAH+GG + GFL +L + VK +H + +L ++ L
Sbjct: 339 STGIDNFAHLGGLIGGFLAIGIL-----------------SNVKKKHWYFNKLLYVIVLS 381
Query: 263 LLIVG 267
+L VG
Sbjct: 382 VLTVG 386
>gi|257079952|ref|ZP_05574313.1| membrane-associated serine protease [Enterococcus faecalis JH1]
gi|294779541|ref|ZP_06744936.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
PC1.1]
gi|307269340|ref|ZP_07550690.1| peptidase, S54 family protein [Enterococcus faecalis TX4248]
gi|307289776|ref|ZP_07569713.1| peptidase, S54 family protein [Enterococcus faecalis TX0411]
gi|397700974|ref|YP_006538762.1| rhomboid family protein [Enterococcus faecalis D32]
gi|256987982|gb|EEU75284.1| membrane-associated serine protease [Enterococcus faecalis JH1]
gi|294453420|gb|EFG21827.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
PC1.1]
gi|306499161|gb|EFM68639.1| peptidase, S54 family protein [Enterococcus faecalis TX0411]
gi|306514339|gb|EFM82904.1| peptidase, S54 family protein [Enterococcus faecalis TX4248]
gi|397337613|gb|AFO45285.1| rhomboid family protein [Enterococcus faecalis D32]
Length = 236
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 39/193 (20%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ V H+ WR IT ++LH G +H++ NM++L +IG ++E +G R +YLLS
Sbjct: 49 GAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWRYLGIYLLS 108
Query: 163 GFGG--AYYLLFLFNAVS------LLVLLAA------------ALLTLV----VIIAINL 198
G G A + N+VS L L A A++ +V + I INL
Sbjct: 109 GIAGNIASFAFGTPNSVSAGASTALFGLFGAFVILGRHFRDNPAIMYMVQRYSMFIVINL 168
Query: 199 AVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
+ VD H+GG + G L+ A +P + ++H L
Sbjct: 169 LFNLFSSSVDMMGHVGGLIGGLLV------------ATAFAVPNREEAFNKHERIMATLI 216
Query: 258 IVALVL--LIVGF 268
+ LV+ L++GF
Sbjct: 217 FIFLVVICLLLGF 229
>gi|29377262|ref|NP_816416.1| small hydrophobic molecule transporter protein [Enterococcus
faecalis V583]
gi|227554271|ref|ZP_03984318.1| S54 family peptidase [Enterococcus faecalis HH22]
gi|229544828|ref|ZP_04433553.1| S54 family peptidase [Enterococcus faecalis TX1322]
gi|229549095|ref|ZP_04437820.1| S54 family peptidase [Enterococcus faecalis ATCC 29200]
gi|256616711|ref|ZP_05473557.1| membrane-associated serine protease [Enterococcus faecalis ATCC
4200]
gi|256854083|ref|ZP_05559448.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256960966|ref|ZP_05565137.1| membrane-associated serine protease [Enterococcus faecalis Merz96]
gi|257081651|ref|ZP_05576012.1| membrane-associated serine protease [Enterococcus faecalis E1Sol]
gi|257084247|ref|ZP_05578608.1| membrane-associated serine protease [Enterococcus faecalis Fly1]
gi|257087753|ref|ZP_05582114.1| membrane-associated serine protease [Enterococcus faecalis D6]
gi|257091025|ref|ZP_05585386.1| membrane-associated serine protease [Enterococcus faecalis CH188]
gi|257420174|ref|ZP_05597168.1| membrane-associated serine protease [Enterococcus faecalis T11]
gi|257421601|ref|ZP_05598591.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|293382447|ref|ZP_06628382.1| rhomboid family protein [Enterococcus faecalis R712]
gi|293387169|ref|ZP_06631730.1| rhomboid family protein [Enterococcus faecalis S613]
gi|300860492|ref|ZP_07106579.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
TUSoD Ef11]
gi|307276144|ref|ZP_07557275.1| peptidase, S54 family protein [Enterococcus faecalis TX2134]
gi|307286868|ref|ZP_07566950.1| peptidase, S54 family protein [Enterococcus faecalis TX0109]
gi|312900482|ref|ZP_07759784.1| peptidase, S54 family protein [Enterococcus faecalis TX0470]
gi|312904732|ref|ZP_07763881.1| peptidase, S54 family protein [Enterococcus faecalis TX0635]
gi|312906502|ref|ZP_07765504.1| peptidase, S54 family protein [Enterococcus faecalis DAPTO 512]
gi|312910446|ref|ZP_07769292.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
DAPTO 516]
gi|312951098|ref|ZP_07770003.1| peptidase, S54 family protein [Enterococcus faecalis TX0102]
gi|384514113|ref|YP_005709206.1| rhomboid family protein [Enterococcus faecalis OG1RF]
gi|384519578|ref|YP_005706883.1| rhomboid family protein [Enterococcus faecalis 62]
gi|421512726|ref|ZP_15959525.1| GlpG protein (membrane protein of glp regulon) [Enterococcus
faecalis ATCC 29212]
gi|422684496|ref|ZP_16742732.1| peptidase, S54 family protein [Enterococcus faecalis TX4000]
gi|422690193|ref|ZP_16748251.1| peptidase, S54 family protein [Enterococcus faecalis TX0630]
gi|422691144|ref|ZP_16749183.1| peptidase, S54 family protein [Enterococcus faecalis TX0031]
gi|422693799|ref|ZP_16751805.1| peptidase, S54 family protein [Enterococcus faecalis TX4244]
gi|422697513|ref|ZP_16755449.1| peptidase, S54 family protein [Enterococcus faecalis TX1346]
gi|422699619|ref|ZP_16757482.1| peptidase, S54 family protein [Enterococcus faecalis TX1342]
gi|422702192|ref|ZP_16760030.1| peptidase, S54 family protein [Enterococcus faecalis TX1302]
gi|422706114|ref|ZP_16763819.1| peptidase, S54 family protein [Enterococcus faecalis TX0043]
gi|422709156|ref|ZP_16766669.1| peptidase, S54 family protein [Enterococcus faecalis TX0027]
gi|422712654|ref|ZP_16769417.1| peptidase, S54 family protein [Enterococcus faecalis TX0309A]
gi|422716503|ref|ZP_16773207.1| peptidase, S54 family protein [Enterococcus faecalis TX0309B]
gi|422719592|ref|ZP_16776223.1| peptidase, S54 family protein [Enterococcus faecalis TX0017]
gi|422723419|ref|ZP_16779955.1| peptidase, S54 family protein [Enterococcus faecalis TX2137]
gi|422726049|ref|ZP_16782504.1| peptidase, S54 family protein [Enterococcus faecalis TX0312]
gi|422731124|ref|ZP_16787499.1| peptidase, S54 family protein [Enterococcus faecalis TX0645]
gi|422734025|ref|ZP_16790322.1| peptidase, S54 family protein [Enterococcus faecalis TX1341]
gi|422738373|ref|ZP_16793570.1| peptidase, S54 family protein [Enterococcus faecalis TX2141]
gi|424672612|ref|ZP_18109567.1| peptidase, S54 family [Enterococcus faecalis 599]
gi|424755744|ref|ZP_18183600.1| peptidase, S54 family [Enterococcus faecalis R508]
gi|428767934|ref|YP_007154045.1| small hydrophobic molecule transporter protein, putative
[Enterococcus faecalis str. Symbioflor 1]
gi|430359105|ref|ZP_19425721.1| membrane-associated serine protease [Enterococcus faecalis OG1X]
gi|430370856|ref|ZP_19429263.1| membrane-associated serine protease [Enterococcus faecalis M7]
gi|29344728|gb|AAO82486.1| small hydrophobic molecule transporter protein, putative
[Enterococcus faecalis V583]
gi|227176561|gb|EEI57533.1| S54 family peptidase [Enterococcus faecalis HH22]
gi|229305783|gb|EEN71779.1| S54 family peptidase [Enterococcus faecalis ATCC 29200]
gi|229310050|gb|EEN76037.1| S54 family peptidase [Enterococcus faecalis TX1322]
gi|256596238|gb|EEU15414.1| membrane-associated serine protease [Enterococcus faecalis ATCC
4200]
gi|256711026|gb|EEU26069.1| conserved hypothetical protein [Enterococcus faecalis T8]
gi|256951462|gb|EEU68094.1| membrane-associated serine protease [Enterococcus faecalis Merz96]
gi|256989681|gb|EEU76983.1| membrane-associated serine protease [Enterococcus faecalis E1Sol]
gi|256992277|gb|EEU79579.1| membrane-associated serine protease [Enterococcus faecalis Fly1]
gi|256995783|gb|EEU83085.1| membrane-associated serine protease [Enterococcus faecalis D6]
gi|256999837|gb|EEU86357.1| membrane-associated serine protease [Enterococcus faecalis CH188]
gi|257162002|gb|EEU91962.1| membrane-associated serine protease [Enterococcus faecalis T11]
gi|257163425|gb|EEU93385.1| conserved hypothetical protein [Enterococcus faecalis X98]
gi|291080131|gb|EFE17495.1| rhomboid family protein [Enterococcus faecalis R712]
gi|291083440|gb|EFE20403.1| rhomboid family protein [Enterococcus faecalis S613]
gi|295113720|emb|CBL32357.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Enterococcus sp. 7L76]
gi|300849531|gb|EFK77281.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
TUSoD Ef11]
gi|306502083|gb|EFM71369.1| peptidase, S54 family protein [Enterococcus faecalis TX0109]
gi|306507138|gb|EFM76277.1| peptidase, S54 family protein [Enterococcus faecalis TX2134]
gi|310627445|gb|EFQ10728.1| peptidase, S54 family protein [Enterococcus faecalis DAPTO 512]
gi|310630874|gb|EFQ14157.1| peptidase, S54 family protein [Enterococcus faecalis TX0102]
gi|310631933|gb|EFQ15216.1| peptidase, S54 family protein [Enterococcus faecalis TX0635]
gi|311289218|gb|EFQ67774.1| peptidase, S54 (rhomboid) family protein [Enterococcus faecalis
DAPTO 516]
gi|311292401|gb|EFQ70957.1| peptidase, S54 family protein [Enterococcus faecalis TX0470]
gi|315026583|gb|EFT38515.1| peptidase, S54 family protein [Enterococcus faecalis TX2137]
gi|315030810|gb|EFT42742.1| peptidase, S54 family protein [Enterococcus faecalis TX4000]
gi|315033041|gb|EFT44973.1| peptidase, S54 family protein [Enterococcus faecalis TX0017]
gi|315036315|gb|EFT48247.1| peptidase, S54 family protein [Enterococcus faecalis TX0027]
gi|315145726|gb|EFT89742.1| peptidase, S54 family protein [Enterococcus faecalis TX2141]
gi|315148748|gb|EFT92764.1| peptidase, S54 family protein [Enterococcus faecalis TX4244]
gi|315154212|gb|EFT98228.1| peptidase, S54 family protein [Enterococcus faecalis TX0031]
gi|315156498|gb|EFU00515.1| peptidase, S54 family protein [Enterococcus faecalis TX0043]
gi|315158975|gb|EFU02992.1| peptidase, S54 family protein [Enterococcus faecalis TX0312]
gi|315162792|gb|EFU06809.1| peptidase, S54 family protein [Enterococcus faecalis TX0645]
gi|315166274|gb|EFU10291.1| peptidase, S54 family protein [Enterococcus faecalis TX1302]
gi|315169133|gb|EFU13150.1| peptidase, S54 family protein [Enterococcus faecalis TX1341]
gi|315171857|gb|EFU15874.1| peptidase, S54 family protein [Enterococcus faecalis TX1342]
gi|315173893|gb|EFU17910.1| peptidase, S54 family protein [Enterococcus faecalis TX1346]
gi|315575258|gb|EFU87449.1| peptidase, S54 family protein [Enterococcus faecalis TX0309B]
gi|315576837|gb|EFU89028.1| peptidase, S54 family protein [Enterococcus faecalis TX0630]
gi|315582383|gb|EFU94574.1| peptidase, S54 family protein [Enterococcus faecalis TX0309A]
gi|323481711|gb|ADX81150.1| rhomboid family protein [Enterococcus faecalis 62]
gi|327536002|gb|AEA94836.1| rhomboid family protein [Enterococcus faecalis OG1RF]
gi|401674182|gb|EJS80541.1| GlpG protein (membrane protein of glp regulon) [Enterococcus
faecalis ATCC 29212]
gi|402354963|gb|EJU89751.1| peptidase, S54 family [Enterococcus faecalis 599]
gi|402408930|gb|EJV41379.1| peptidase, S54 family [Enterococcus faecalis R508]
gi|427186107|emb|CCO73331.1| small hydrophobic molecule transporter protein, putative
[Enterococcus faecalis str. Symbioflor 1]
gi|429513460|gb|ELA03041.1| membrane-associated serine protease [Enterococcus faecalis OG1X]
gi|429515221|gb|ELA04739.1| membrane-associated serine protease [Enterococcus faecalis M7]
Length = 236
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 39/193 (20%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ V H+ WR IT ++LH G +H++ NM++L +IG ++E +G R +YLLS
Sbjct: 49 GAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWRYLGIYLLS 108
Query: 163 GFGG--AYYLLFLFNAVS------LLVLLAA------------ALLTLV----VIIAINL 198
G G A + N+VS L L A A++ +V + I INL
Sbjct: 109 GIAGNIASFAFGTPNSVSAGASTALFGLFGAFVILGRHFRDNPAIMYMVQRYSMFIVINL 168
Query: 199 AVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
+ VD H+GG + G L+ A +P + ++H L
Sbjct: 169 LFNLFSSSVDMMGHVGGLIGGLLV------------ATAFAVPNREEAFNKHERIMATLI 216
Query: 258 IVALVL--LIVGF 268
+ LV+ L++GF
Sbjct: 217 FIFLVVICLLLGF 229
>gi|406837558|ref|ZP_11097152.1| hypothetical protein LvinD2_03024 [Lactobacillus vini DSM 20605]
Length = 244
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 73/151 (48%), Gaps = 25/151 (16%)
Query: 92 FGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFG 151
F + L++LGA W+ + + WRL T I+LH + H+ NM +L++ G +E+ +G
Sbjct: 54 FNINGQVLEQLGA-RWNPDIIAGEWWRLFTPIFLHVTIYHIAFNMAALMYAGTIVEEVYG 112
Query: 152 FVRVGFVYLLSGFGG----AYY------------LLFLFNAVSLLVLLAAALLTL----- 190
+ +YL SGF G A++ L LF ++LL +++
Sbjct: 113 HFKFLLIYLFSGFSGNLISAFFKPNTISAGASTSLFGLFAVIALLQVVSGFKHQFTELSK 172
Query: 191 --VVIIAINLAVGI-LPHVDNFAHIGGFMAG 218
VV+I NL + +P VD H+GG + G
Sbjct: 173 GAVVLIVANLVFNLFMPSVDIAGHLGGLVGG 203
>gi|410455491|ref|ZP_11309370.1| serine protease of Rhomboid family, contains TPR repeats [Bacillus
bataviensis LMG 21833]
gi|409929185|gb|EKN66272.1| serine protease of Rhomboid family, contains TPR repeats [Bacillus
bataviensis LMG 21833]
Length = 519
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 46/72 (63%), Gaps = 1/72 (1%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
++STL K GA + ++++ + WR IT I+LH G +HL N L+L F+G +E+ FG VR
Sbjct: 207 NTSTLIKYGA-KVNQLILGGEWWRFITPIFLHIGFVHLAMNTLALYFLGTTVEKIFGSVR 265
Query: 155 VGFVYLLSGFGG 166
+YL +G G
Sbjct: 266 FLLIYLFAGVMG 277
>gi|153811275|ref|ZP_01963943.1| hypothetical protein RUMOBE_01667 [Ruminococcus obeum ATCC 29174]
gi|149832773|gb|EDM87857.1| peptidase, S54 family [Ruminococcus obeum ATCC 29174]
Length = 163
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/149 (30%), Positives = 67/149 (44%), Gaps = 27/149 (18%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA ++ + +RL TC++LH G+ HLL NML L +G RLEQ G ++ +YL+
Sbjct: 7 GAAFTPMIIQGGEYYRLFTCMFLHFGIEHLLNNMLVLFVLGSRLEQVIGKIKFLLIYLIG 66
Query: 163 G-FGGAYYLLFLFNAVSLLVLLAAA-------------------------LLTLVVIIAI 196
G FG LL V A+ + ++V+ A
Sbjct: 67 GVFGNVISLLIELRTQDFAVSAGASGAVFAVMGAMIYIVIRNKGWLGDLSMRQILVMAAF 126
Query: 197 NLAVGILPH-VDNFAHIGGFMAGFLLGFV 224
+L G VDN AH+GG ++GF L +
Sbjct: 127 SLYFGFASTGVDNTAHVGGMVSGFFLAVI 155
>gi|163790986|ref|ZP_02185408.1| small hydrophobic molecule transporter protein, putative
[Carnobacterium sp. AT7]
gi|159873725|gb|EDP67807.1| small hydrophobic molecule transporter protein, putative
[Carnobacterium sp. AT7]
Length = 235
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/69 (44%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 98 TLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGF 157
TL K GA +++ + + WRLIT ++LH G IHLL N + L ++G +LE FG +R
Sbjct: 44 TLLKYGA-KFNPYIVLGEWWRLITPMFLHIGFIHLLMNSVILYYLGEQLEGMFGHLRFAG 102
Query: 158 VYLLSGFGG 166
+YLLSG G
Sbjct: 103 IYLLSGIAG 111
>gi|418968199|ref|ZP_13519820.1| peptidase, S54 family [Streptococcus mitis SK616]
gi|383340851|gb|EID19134.1| peptidase, S54 family [Streptococcus mitis SK616]
Length = 225
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 26/160 (16%)
Query: 96 SSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ TL + GA+ + + Q WRL + I++H G H + NMLSL ++G ++E+ FG +
Sbjct: 37 ADTLFRFGAMYGPAIRIFPEQIWRLFSAIFVHIGWEHFIVNMLSLYYLGRQVEEIFGSKK 96
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSL-------LVLLAAALLTL----------------V 191
F+YLLSG G + +F+F+ SL L L AA++ L +
Sbjct: 97 FFFLYLLSGMMGNLF-VFVFSPKSLAAGASTSLYGLFAAIIVLRYATRNPYIQQLGQSYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
+ +N+ +L P + HIGG + G LL + +R +
Sbjct: 156 TLFVVNIIGSVLIPGISLAGHIGGAVGGALLAVIFPVRGE 195
>gi|359442292|ref|ZP_09232162.1| hypothetical protein P20429_2538 [Pseudoalteromonas sp. BSi20429]
gi|358035903|dbj|GAA68411.1| hypothetical protein P20429_2538 [Pseudoalteromonas sp. BSi20429]
Length = 361
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 33/142 (23%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYL---------------- 160
W ++TC++LH ++HL+ NM L +G LE G R YL
Sbjct: 197 WTVLTCVFLHGSIMHLVGNMYFLYIVGDNLEDVLGHKRFLLWYLACGLLASFASYIVSPM 256
Query: 161 -----------LSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGIL------ 203
++G G Y + F +++ + ++ L+ V AI L I
Sbjct: 257 STIPGVGASGAIAGLFGMYLMWFRHASLTFMFIIYQKKLSAVWFFAIWLGFNIFGAVTGP 316
Query: 204 PHVDNFAHIGGFMAGFLLGFVL 225
+D AHIGGF+AG ++G++L
Sbjct: 317 DGIDYGAHIGGFIAGLIIGYIL 338
>gi|304384713|ref|ZP_07367059.1| rhomboid family integral membrane protein [Pediococcus acidilactici
DSM 20284]
gi|418068986|ref|ZP_12706266.1| membrane-associated serine protease [Pediococcus acidilactici
MA18/5M]
gi|304328907|gb|EFL96127.1| rhomboid family integral membrane protein [Pediococcus acidilactici
DSM 20284]
gi|357537719|gb|EHJ21742.1| membrane-associated serine protease [Pediococcus acidilactici
MA18/5M]
Length = 229
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 32/161 (19%)
Query: 110 VVHEHQGW-RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FGGA 167
++ + GW L T +++H G HLL NM++L FIG LEQ G R +YLLSG F
Sbjct: 54 MIKDGAGWASLFTSMFVHIGFEHLLFNMITLYFIGRLLEQVIGHGRFLLIYLLSGIFANV 113
Query: 168 YYLLF-------------LFNAVSLLVLLAAALLT----------LVVIIAINLAVGIL- 203
L F +F + + +++A +++ A+ + G+
Sbjct: 114 VSLAFAAPNSISAGASGAIFGIIGVWIMMAEQYRNYPFLAGMGRQMLIFSALGIVSGMFG 173
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
++D FAH+GG +AGFLLG+ F + ++P + R
Sbjct: 174 TNIDIFAHLGGLVAGFLLGY------GFSFPNLGKVPLKKR 208
>gi|168181264|ref|ZP_02615928.1| peptidase, S54 family [Clostridium botulinum Bf]
gi|237793720|ref|YP_002861272.1| putative membrane associated peptidase [Clostridium botulinum Ba4
str. 657]
gi|182675329|gb|EDT87290.1| peptidase, S54 family [Clostridium botulinum Bf]
gi|229262482|gb|ACQ53515.1| putative membrane associated peptidase [Clostridium botulinum Ba4
str. 657]
Length = 342
Score = 53.5 bits (127), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/143 (30%), Positives = 73/143 (51%), Gaps = 25/143 (17%)
Query: 90 PLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQ 149
+F L LGA + + ++ + +RLIT ++LH G+IHL NM +L IG +E
Sbjct: 177 SIFTSDIKVLIFLGA-KVNSFINNGEYYRLITAMFLHGGLIHLALNMYALNAIGPLVEIY 235
Query: 150 FGFVRVGFVYLLSGFGGAYYLLFLFNAV-------SLLVLLAAALL-------------- 188
FG V+ +Y +SG +Y+ +LF+A ++ +L A L+
Sbjct: 236 FGKVKYLIIYFISGILSSYF-SYLFSASVSIGASGAIFGILGATLIIAYTNRKKGGKEFL 294
Query: 189 -TLVVIIAINLAVGI-LPHVDNF 209
++ +I +NL +G +P+VDNF
Sbjct: 295 NNIISVIVVNLILGFSIPNVDNF 317
>gi|427439986|ref|ZP_18924515.1| rhomboid family integral membrane protein [Pediococcus lolii NGRI
0510Q]
gi|425787818|dbj|GAC45303.1| rhomboid family integral membrane protein [Pediococcus lolii NGRI
0510Q]
Length = 229
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 32/161 (19%)
Query: 110 VVHEHQGW-RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FGGA 167
++ + GW L T +++H G HLL NM++L FIG LEQ G R +YLLSG F
Sbjct: 54 MIKDGAGWASLFTSMFVHIGFEHLLFNMITLYFIGRLLEQVIGHGRFLLIYLLSGIFANV 113
Query: 168 YYLLF-------------LFNAVSLLVLLAAALLT----------LVVIIAINLAVGIL- 203
L F +F + + +++A +++ A+ + G+
Sbjct: 114 VSLAFAAPNSISAGASGAIFGIIGVWIMMAEQYRNYPFLAGMGRQMLIFSALGIVSGMFG 173
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
++D FAH+GG +AGFLLG+ F + ++P + R
Sbjct: 174 TNIDIFAHLGGLVAGFLLGY------GFSFPNLGKVPLKKR 208
>gi|257413126|ref|ZP_04742087.2| integral membrane protein [Roseburia intestinalis L1-82]
gi|257204520|gb|EEV02805.1| integral membrane protein [Roseburia intestinalis L1-82]
Length = 366
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 68/140 (48%), Gaps = 29/140 (20%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG---AYYL 170
HQ WR+ T +++H G+ HL+ NM+ +G RLE+ G ++ +Y+LSG GG +Y++
Sbjct: 220 HQWWRIFTAMFIHFGLPHLVNNMVIFFCVGSRLERAAGHFKMFVIYMLSGIGGGLLSYFM 279
Query: 171 LF--------------LFNAVSLLVL-----------LAAALLTLVVIIAINLAVGILPH 205
+ +F + L+ L + L+ ++++ +
Sbjct: 280 MLYSGDYAVSAGASGAVFGTIGGLIWVVIRHRGRFEGLTVKGMILMAVLSLYYGFSTIG- 338
Query: 206 VDNFAHIGGFMAGFLLGFVL 225
+DN+ H+GG + GFL +L
Sbjct: 339 IDNWCHVGGILTGFLAAMIL 358
>gi|386712717|ref|YP_006179039.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
gi|384072272|emb|CCG43762.1| S54 family peptidase [Halobacillus halophilus DSM 2266]
Length = 256
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 74/169 (43%), Gaps = 27/169 (15%)
Query: 110 VVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--- 166
++ E + WRL+T I+LHAG H L N SLV G LEQ G + F+YL +G G
Sbjct: 53 LILEGEYWRLVTPIFLHAGFAHALFNSFSLVLFGPALEQILGKFKFIFMYLFAGIVGNLG 112
Query: 167 -------AYY--------LLFLFNAVSLLVLL-------AAALLTLVVIIAINLAVGILP 204
AYY + +F +VL A + + +V+ I P
Sbjct: 113 TFIVNPDAYYQHLGASGAIFGIFGVYVFMVLFRKHLIDQANSQIVMVIFILGLFMTFTRP 172
Query: 205 HVDNFAHIGGFMAGFLLGFVLL--LRPQFGWAERHQLPAQARVKSRHNP 251
+++ H+ G + GF + +L RP W +R + +Q+ NP
Sbjct: 173 NINVLGHLFGLIGGFAIAPTILRNARPFSIWQQRTRTSSQSSGDISFNP 221
>gi|260909554|ref|ZP_05916256.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
gi|260636290|gb|EEX54278.1| conserved hypothetical protein [Prevotella sp. oral taxon 472 str.
F0295]
Length = 244
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 31/231 (13%)
Query: 31 PGSDQQWTSWLIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENP 90
PG + T ++ PM + + A + N K+++ V F+ + NP
Sbjct: 21 PGQVSKRTPYVKPMLYIKRSGGSVGAWFKEN--KDSYPMALPMVVCFVYYVVMTFGGVNP 78
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
F ++ + G E + + + + WRL T I+ HAG+ H++ N+ + F + L++
Sbjct: 79 -FSDTAEAYLEWGGGERESIYVDGEWWRLFTNIFAHAGIEHIMGNLAAYAFGAVFLKEIL 137
Query: 151 GFVRVGFVYLLSGFGGAYY---------------LLFLFNAVSLLVLLAAALLTL----- 190
+V V+L G GA +L LF A LL A+L T
Sbjct: 138 SPWKVVAVFLACGLAGALVCSVTTDYVFLGASGGVLGLFGAFIGYTLLEASLFTRYKNTL 197
Query: 191 ---VVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
+V+I I++ V AH+ G ++GFL+G + L W +RH
Sbjct: 198 NVSLVVIGISILGSFQAGVSLTAHLVGILSGFLIGCAIPL-----WKQRHD 243
>gi|47095921|ref|ZP_00233524.1| rhomboid family protein [Listeria monocytogenes str. 1/2a F6854]
gi|254912011|ref|ZP_05262023.1| rhomboid family protein [Listeria monocytogenes J2818]
gi|254936338|ref|ZP_05268035.1| rhomboid family protein [Listeria monocytogenes F6900]
gi|258611432|ref|ZP_05232285.2| rhomboid family protein [Listeria monocytogenes FSL N3-165]
gi|386043648|ref|YP_005962453.1| rhomboid family protein [Listeria monocytogenes 10403S]
gi|386046989|ref|YP_005965321.1| rhomboid family protein [Listeria monocytogenes J0161]
gi|386050313|ref|YP_005968304.1| rhomboid family protein [Listeria monocytogenes FSL R2-561]
gi|386053590|ref|YP_005971148.1| rhomboid family protein [Listeria monocytogenes Finland 1998]
gi|47015667|gb|EAL06597.1| rhomboid family protein [Listeria monocytogenes str. 1/2a F6854]
gi|258599975|gb|EEW13300.1| rhomboid family protein [Listeria monocytogenes FSL N3-165]
gi|258608928|gb|EEW21536.1| rhomboid family protein [Listeria monocytogenes F6900]
gi|293589976|gb|EFF98310.1| rhomboid family protein [Listeria monocytogenes J2818]
gi|345533980|gb|AEO03421.1| rhomboid family protein [Listeria monocytogenes J0161]
gi|345536882|gb|AEO06322.1| rhomboid family protein [Listeria monocytogenes 10403S]
gi|346424159|gb|AEO25684.1| rhomboid family protein [Listeria monocytogenes FSL R2-561]
gi|346646241|gb|AEO38866.1| rhomboid family protein [Listeria monocytogenes Finland 1998]
Length = 518
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++H+ +N + L +G E+ +G R + LL G
Sbjct: 223 KFNPLIYAGEWWRFISPIFLHSGLMHIASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 282
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 283 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 342
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 343 SQIDIAGHIGGLVGGFLLAGALSLPKQF 370
>gi|256963891|ref|ZP_05568062.1| membrane-associated serine protease [Enterococcus faecalis
HIP11704]
gi|257416957|ref|ZP_05593951.1| membrane-associated serine protease [Enterococcus faecalis ARO1/DG]
gi|307272082|ref|ZP_07553345.1| peptidase, S54 family protein [Enterococcus faecalis TX0855]
gi|307280665|ref|ZP_07561713.1| peptidase, S54 family protein [Enterococcus faecalis TX0860]
gi|256954387|gb|EEU71019.1| membrane-associated serine protease [Enterococcus faecalis
HIP11704]
gi|257158785|gb|EEU88745.1| membrane-associated serine protease [Enterococcus faecalis ARO1/DG]
gi|306504031|gb|EFM73248.1| peptidase, S54 family protein [Enterococcus faecalis TX0860]
gi|306511198|gb|EFM80205.1| peptidase, S54 family protein [Enterococcus faecalis TX0855]
Length = 236
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 39/193 (20%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ V H+ WR IT ++LH G +H++ NM++L +IG ++E +G R +YLLS
Sbjct: 49 GAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWRYLGIYLLS 108
Query: 163 GFGG--AYYLLFLFNAVS------LLVLLAA------------ALLTLV----VIIAINL 198
G G A + N+VS L L A A++ +V + I INL
Sbjct: 109 GIAGNIASFAFGTPNSVSAGASTALFGLFGAFVILGRHFRDNPAIMYMVQRYSMFIVINL 168
Query: 199 AVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
+ VD H+GG + G L+ A +P + ++H L
Sbjct: 169 LFNLFSSSVDMMGHVGGLIGGLLV------------ATAFAVPNRQEAFNKHERIMATLI 216
Query: 258 IVALVL--LIVGF 268
+ LV+ L++GF
Sbjct: 217 FIFLVVICLLLGF 229
>gi|145503155|ref|XP_001437555.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124404705|emb|CAK70158.1| unnamed protein product [Paramecium tetraurelia]
Length = 277
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 66/144 (45%), Gaps = 24/144 (16%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
G+ +++ Q WRL+ I+LH H++ NM+ ++ G LE G+ RV +Y++
Sbjct: 82 GSKHTPSIIYRFQFWRLVCPIFLHGSFSHIIGNMMVQIYYGFILELTHGWKRVSILYIVG 141
Query: 163 GFGGAYYLLFLFNAV-------SLLVLLAAALLTLV----------VIIAINLAVGIL-- 203
G G + + F + S+ LLA L+ + +++ I LA I
Sbjct: 142 GIGASLFSCVRFYSETSVGASGSIFALLALELIYFITAFPGIEPKRIVVFILLAPMIFLS 201
Query: 204 -----PHVDNFAHIGGFMAGFLLG 222
P VD H+GG + G L+G
Sbjct: 202 FIDAPPQVDIAGHLGGLVVGLLIG 225
>gi|380300997|ref|ZP_09850690.1| membrane protein [Brachybacterium squillarum M-6-3]
Length = 310
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 78/181 (43%), Gaps = 26/181 (14%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLFLFNA 176
W +T +LH GV+HLL NM +L IG LE+ G VR +YL S G ++ +A
Sbjct: 129 WTFLTAGFLHGGVMHLLLNMYALWIIGQYLEKTLGHVRFAAIYLTSILAGHTAVMLFTDA 188
Query: 177 VS-------------LLVLLAAALLT----------LVVIIAINLAVGIL-PHVDNFAHI 212
S + L AA + + V+I +NL + L P++ H+
Sbjct: 189 TSQAWYSGTLGASGGIFGLFAALFIVNRRLGGQTAQVAVLIGLNLVITFLFPNISWQGHL 248
Query: 213 GGF-MAGFLLGFVLLLRPQFG-WAERHQLPAQARVKSRHNPYQYVLCIVALVLLIVGFTV 270
GG M L + LRP+ A+R L ++ + VL VALV + V
Sbjct: 249 GGLVMGAALTAGMFALRPKVSPGADRQALARRSAIAHAAVIAAGVLVCVALVAMRVLMVT 308
Query: 271 G 271
G
Sbjct: 309 G 309
>gi|418635278|ref|ZP_13197657.1| peptidase, S54 family [Staphylococcus lugdunensis VCU139]
gi|374842000|gb|EHS05452.1| peptidase, S54 family [Staphylococcus lugdunensis VCU139]
Length = 485
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 29/155 (18%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
S+ L +G L VVH + +RLIT ++LH H+L NMLSL G +E G ++
Sbjct: 181 SNIKLLDMGGLVHFNVVH-GEWYRLITSMFLHFNFEHILMNMLSLFIFGKIVEAIIGPMK 239
Query: 155 VGFVYLLSG-FG------------------------GAYYLLFLFNAVSLLVLLAAALLT 189
+ +Y++SG FG GA ++ + + V ++ L+
Sbjct: 240 MLILYIISGLFGNFLSLSFNTDTVSAGASGAIFGLIGAIIVMMIISKVYSRKMIGQLLIA 299
Query: 190 LVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFV 224
LV++I +L +L +V+ AH+GGF++G LL ++
Sbjct: 300 LVILIGFSL---LLSNVNIMAHLGGFISGLLLIYI 331
>gi|347548722|ref|YP_004855050.1| hypothetical protein LIV_1288 [Listeria ivanovii subsp. ivanovii
PAM 55]
gi|346981793|emb|CBW85766.1| Putative yqgP [Listeria ivanovii subsp. ivanovii PAM 55]
Length = 512
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+++ +++ + WR IT I+LH+G+IHL +N + L +G E+ +G R + +L G
Sbjct: 217 KFNPLIYAGEWWRFITPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYVLILILGGIC 276
Query: 166 G-----AYYLLFLFNAVSLLVLLAAALLTLVV----------------IIAINLAVGIL- 203
G A + A + + + ALL LVV ++A+NL + +
Sbjct: 277 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNVYAKTIGVSIASLVAVNLLLDVFS 336
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG GFLL L L QF
Sbjct: 337 SQIDIAGHIGGLAGGFLLAGALSLPNQF 364
>gi|410657229|ref|YP_006909600.1| GlpG protein (membrane protein of glp regulon) [Dehalobacter sp.
DCA]
gi|410660265|ref|YP_006912636.1| Rhomboid-like protein [Dehalobacter sp. CF]
gi|409019584|gb|AFV01615.1| GlpG protein (membrane protein of glp regulon) [Dehalobacter sp.
DCA]
gi|409022621|gb|AFV04651.1| Rhomboid-like protein [Dehalobacter sp. CF]
Length = 203
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/135 (30%), Positives = 68/135 (50%), Gaps = 22/135 (16%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+ + ++ Q WRL+T +++H G HLL N+ +L+ +G E+ FG R +YL SG
Sbjct: 51 KMNTLIDAGQYWRLLTSMFIHIGFTHLLFNVYALIVLGKLAERLFGHGRFLLIYLFSGLA 110
Query: 166 GAY--YL----LFLFNAVSLLVLLAAALL---------------TLVVIIAINLAVGIL- 203
G+ YL L + ++ LL A ++ L +++ INL G++
Sbjct: 111 GSLISYLWGPELSAGASGAIFGLLGAIIIYGCRKPAFWRTGLITNLAIVLGINLVFGVVF 170
Query: 204 PHVDNFAHIGGFMAG 218
+DNFAH+GG G
Sbjct: 171 SGIDNFAHLGGLFGG 185
>gi|404413413|ref|YP_006699000.1| rhomboid family protein [Listeria monocytogenes SLCC7179]
gi|404239112|emb|CBY60513.1| rhomboid family protein [Listeria monocytogenes SLCC7179]
Length = 512
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++H+ +N + L +G E+ +G R + LL G
Sbjct: 217 KFNPLIYAGEWWRFISPIFLHSGLMHIASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 276
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 277 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 336
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 337 SQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|28572184|ref|NP_788964.1| integral membrane protein [Tropheryma whipplei TW08/27]
gi|28410315|emb|CAD66701.1| putative integral membrane protein [Tropheryma whipplei TW08/27]
Length = 207
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 17/123 (13%)
Query: 115 QGWRLITCIWLHAGV--IHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF 172
Q WR+ T ++LH+ +HLL NM SL ++G LEQ+ G R +Y +SG G A +++
Sbjct: 52 QPWRIFTSMFLHSTFTPLHLLFNMYSLWWLGSNLEQRIGSWRFLALYFISGLGAAVGIVY 111
Query: 173 L--FNAVSL-----LVLLAAALLTLVV-------IIAINLAVG-ILPHVDNFAHIGGFMA 217
L +N ++L + L AA + L + I+ +NL + +LP V AHIGG ++
Sbjct: 112 LQPYNTLTLGASGGIFGLLAAFIVLRIDSGQLWGIVGLNLIISFLLPGVSWQAHIGGLLS 171
Query: 218 GFL 220
GF+
Sbjct: 172 GFV 174
>gi|16803377|ref|NP_464862.1| hypothetical protein lmo1337 [Listeria monocytogenes EGD-e]
gi|284801722|ref|YP_003413587.1| hypothetical protein LM5578_1476 [Listeria monocytogenes 08-5578]
gi|284994864|ref|YP_003416632.1| hypothetical protein LM5923_1429 [Listeria monocytogenes 08-5923]
gi|404283828|ref|YP_006684725.1| rhomboid family protein [Listeria monocytogenes SLCC2372]
gi|404410635|ref|YP_006696223.1| rhomboid family protein [Listeria monocytogenes SLCC5850]
gi|405758384|ref|YP_006687660.1| rhomboid family protein [Listeria monocytogenes SLCC2479]
gi|16410753|emb|CAC99415.1| lmo1337 [Listeria monocytogenes EGD-e]
gi|284057284|gb|ADB68225.1| hypothetical protein LM5578_1476 [Listeria monocytogenes 08-5578]
gi|284060331|gb|ADB71270.1| hypothetical protein LM5923_1429 [Listeria monocytogenes 08-5923]
gi|404230461|emb|CBY51865.1| rhomboid family protein [Listeria monocytogenes SLCC5850]
gi|404233330|emb|CBY54733.1| rhomboid family protein [Listeria monocytogenes SLCC2372]
gi|404236266|emb|CBY57668.1| rhomboid family protein [Listeria monocytogenes SLCC2479]
gi|441471011|emb|CCQ20766.1| Rhomboid protease gluP [Listeria monocytogenes]
gi|441474138|emb|CCQ23892.1| Rhomboid protease gluP [Listeria monocytogenes N53-1]
Length = 512
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 73/148 (49%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF- 164
+++ +++ + WR I+ I+LH+G++H+ +N + L +G E+ +G R + LL G
Sbjct: 217 KFNPLIYAGEWWRFISPIFLHSGLMHIASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC 276
Query: 165 --------------GGAYYLLFLFNAVSLLVLLAAAL------LTLVVIIAINLAVGIL- 203
G + + + A+ LV+L L +++ ++AINL + +
Sbjct: 277 GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 336
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 337 SQIDIAGHIGGLVGGFLLAGALSLPKQF 364
>gi|374374022|ref|ZP_09631681.1| Peptidase S54, rhomboid domain [Niabella soli DSM 19437]
gi|373233464|gb|EHP53258.1| Peptidase S54, rhomboid domain [Niabella soli DSM 19437]
Length = 490
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 64/142 (45%), Gaps = 25/142 (17%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
P + +L GA + + E Q WRL+T +LH G+ HLL NM +L++IG+ LE G
Sbjct: 180 PDNESLLNWGA-NFRPITLEGQWWRLLTNCFLHVGIFHLLLNMYALLYIGVLLEPLLGRT 238
Query: 154 RVGFVYLLSGFGGA---------------------YYLLFLFNAVSLLVLLAAA---LLT 189
R YLL+G + Y +FL + L+ A L +
Sbjct: 239 RFISAYLLTGITASITSLWWHDLTISAGASGAIFGMYGVFLAMLTTNLIEKTARKPLLTS 298
Query: 190 LVVIIAINLAVGILPHVDNFAH 211
+ V + NL G+ +DN AH
Sbjct: 299 IAVFVGYNLIYGLKGGIDNAAH 320
>gi|227544150|ref|ZP_03974199.1| S54 family peptidase [Lactobacillus reuteri CF48-3A]
gi|338202576|ref|YP_004648721.1| rhomboid family integral membrane protein [Lactobacillus reuteri
SD2112]
gi|154705524|gb|ABS84188.1| rhomboid family protein [Lactobacillus reuteri]
gi|227185866|gb|EEI65937.1| S54 family peptidase [Lactobacillus reuteri CF48-3A]
gi|336447816|gb|AEI56431.1| rhomboid family integral membrane protein [Lactobacillus reuteri
SD2112]
Length = 219
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 78/156 (50%), Gaps = 25/156 (16%)
Query: 94 PSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFV 153
++ TL +GA ++ E + WRL++ ++LH G+ HL+ N ++L++IG +E+ FG
Sbjct: 33 TNTVTLLNMGA-RSTPLIREGEWWRLVSPVFLHVGLSHLVVNSVTLLYIGRYIEEFFGHW 91
Query: 154 RVGFVYLLSGF---------------GGAYYLLF-LFNAVSLL-------VLLAAALLTL 190
R+ +Y +S F GA +F LF A +L V++ T
Sbjct: 92 RMVIIYFVSAFFGNLTSAVFMPSTVSAGASTAIFGLFGAFLMLGVCFHHNVIVRVLSRTF 151
Query: 191 VVIIAINLAVG-ILPHVDNFAHIGGFMAGFLLGFVL 225
++ + IN+ + L VD HIGG GF + F++
Sbjct: 152 LLFVIINIVMDFFLSGVDLVGHIGGLFGGFFIAFIV 187
>gi|365872871|ref|ZP_09412407.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|363992937|gb|EHM14164.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898 = JCM
15300]
Length = 252
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + + WR +T +LH G++H+ NMLSL IG LE+ FG R +Y + G +
Sbjct: 74 VAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAA 133
Query: 171 LFLF-NAV------SLLVLLAAALL----------TLVVIIAINLAVGI-LPHVDNFAHI 212
++L NAV ++ LL AAL+ T+++++ +N+ + I LP + H+
Sbjct: 134 MWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHM 193
Query: 213 GGFMAGFLLGFVLL 226
GG + G L LL
Sbjct: 194 GGLLFGVLSAGALL 207
>gi|422421998|ref|ZP_16498951.1| rhomboid family protein, partial [Listeria seeligeri FSL S4-171]
gi|313638066|gb|EFS03339.1| rhomboid family protein [Listeria seeligeri FSL S4-171]
Length = 424
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+++ +++ + WR I+ I+LH+G+IHL +N + L +G E+ +G R + ++ G
Sbjct: 132 KFNPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYALILIIGGIC 191
Query: 166 G-----AYYLLFLFNAVSLLVLLAAALLTLVV----------------IIAINLAVGIL- 203
G A + A + + + ALL LVV ++A+NL + +
Sbjct: 192 GNIASFALNMNLSIGASTAVFAVMGALLYLVVLKPNVYAKTIGVSIASLVAVNLLLDVFS 251
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 252 SQIDIAGHIGGLVGGFLLAGALSLPNQF 279
>gi|384563997|ref|ZP_10011101.1| putative membrane protein [Saccharomonospora glauca K62]
gi|384519851|gb|EIE97046.1| putative membrane protein [Saccharomonospora glauca K62]
Length = 330
Score = 53.1 bits (126), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 88/209 (42%), Gaps = 47/209 (22%)
Query: 41 LIPMFVVANVAVFIVAMYINNCPKNNWEGGRGCVARFLGRLSFEPLKENPLFGPSSSTLQ 100
++P+ + NV V+ + + NN+ P+ + + P + L
Sbjct: 109 VVPLLIAVNVVVYALTAFQAGDVMNNY---------------LSPVFADGVLWPEAVVLI 153
Query: 101 KLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYL 160
EW WRL+T +LH G++HL NML+L +G LE G VR VY
Sbjct: 154 D----EW---------WRLLTSGFLHYGLLHLAMNMLALWVLGRDLEMLLGRVRFLAVYF 200
Query: 161 LSGFGGAYYLLF-----------------LFNAVSLLVL-LAAALLTLVVIIAINLAVGI 202
LS F GA + L AV + VL L T + II +N+ + +
Sbjct: 201 LSMFAGAVAVFVLGEPGTATAGASGAIYGLMGAVLVAVLRLRLNPTTAIAIIVLNVFLSM 260
Query: 203 -LPHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
+P++ H+GG +AG + ++ P+
Sbjct: 261 SIPNISLLGHLGGLVAGAVAMVAMVYAPE 289
>gi|421766507|ref|ZP_16203279.1| GlpG protein [Lactococcus garvieae DCC43]
gi|407625017|gb|EKF51742.1| GlpG protein [Lactococcus garvieae DCC43]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 103 GALEWDRVVHE-HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
GAL ++ + Q WRL+T I++H G H L N L+L FIG ++E FG + +Y+L
Sbjct: 48 GALFPPAILDDPTQIWRLVTPIFVHIGWTHFLMNTLTLFFIGRQVEAVFGSLNFSLIYIL 107
Query: 162 SG-FGGAYYLLFLFNAVS 178
SG FG A LF N +S
Sbjct: 108 SGIFGNAVTFLFSPNTLS 125
>gi|422418937|ref|ZP_16495892.1| rhomboid family protein [Listeria seeligeri FSL N1-067]
gi|313633378|gb|EFS00218.1| rhomboid family protein [Listeria seeligeri FSL N1-067]
Length = 414
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/148 (28%), Positives = 72/148 (48%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+++ +++ + WR I+ I+LH+G+IHL +N + L +G E+ +G R + ++ G
Sbjct: 122 KFNPLIYAGEWWRFISPIFLHSGLIHLASNAVMLYIVGAWAERIYGKWRYALILIIGGIC 181
Query: 166 G-----AYYLLFLFNAVSLLVLLAAALLTLVV----------------IIAINLAVGIL- 203
G A + A + + + ALL LVV ++A+NL + +
Sbjct: 182 GNIASFALNMNLSIGASTAVFAVMGALLYLVVLKPNVYAKTIGVSIASLVAVNLLLDVFS 241
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 242 SQIDIAGHIGGLVGGFLLAGALSLPNQF 269
>gi|418423189|ref|ZP_12996358.1| rhomboid family protein [Mycobacterium abscessus subsp. bolletii
BD]
gi|363993164|gb|EHM14390.1| rhomboid family protein [Mycobacterium abscessus subsp. bolletii
BD]
Length = 252
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + + WR +T +LH G++H+ NMLSL IG LE+ FG R +Y + G +
Sbjct: 74 VAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAA 133
Query: 171 LFLF-NAV------SLLVLLAAALL----------TLVVIIAINLAVGI-LPHVDNFAHI 212
++L NAV ++ LL AAL+ T+++++ +N+ + I LP + H+
Sbjct: 134 MWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHM 193
Query: 213 GGFMAGFLLGFVLL 226
GG + G L LL
Sbjct: 194 GGLLFGVLSAGALL 207
>gi|227494200|ref|ZP_03924516.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
gi|226831934|gb|EEH64317.1| conserved hypothetical protein [Actinomyces coleocanis DSM 15436]
Length = 309
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/189 (25%), Positives = 87/189 (46%), Gaps = 33/189 (17%)
Query: 105 LEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF 164
L ++ ++ + WR +T + +H G+IHL NM SL +G LE+ G R +Y+ SG
Sbjct: 120 LFFNPILGYKEPWRFLTVMLVHGGLIHLALNMYSLYLVGNSLERVLGTYRYLALYVASGL 179
Query: 165 GG-------------AYYLLFLFNAVSLLVLLAAALL----------TLVVIIAINLAVG 201
GG ++Y + + + ++ L AA + + +++A+NLA+G
Sbjct: 180 GGSLAVLLWAMVSLDSFYHVTVGASGAIFGLFAAVYVVQRKSGMDARAMGILLAVNLALG 239
Query: 202 -ILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVA 260
+ +V H+GG + G L+ LL R LP + S + +++ V
Sbjct: 240 FTISNVSWQGHLGGMIVGALMSLALL---------RFALPRPGWLASEVSRRTHLVVAVT 290
Query: 261 LVLLIVGFT 269
+LL+ T
Sbjct: 291 FILLVAAIT 299
>gi|291537195|emb|CBL10307.1| Uncharacterized membrane protein (homolog of Drosophila rhomboid)
[Roseburia intestinalis M50/1]
Length = 348
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/139 (30%), Positives = 68/139 (48%), Gaps = 27/139 (19%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAY--YLL 171
HQ WR+ T +++H G+ HL+ NM+ +G RLE+ G ++ +Y+LSG GG Y +
Sbjct: 202 HQWWRIFTAMFIHFGLPHLVNNMVIFCCVGSRLERAAGHFKMFVIYMLSGIGGGLLSYFM 261
Query: 172 FLFN---AVS----------------LLVLLAAALLTLVVIIAINLAVGILPH------V 206
L++ AVS +++ L V I +AV L + +
Sbjct: 262 MLYSGDYAVSAGASGAVFGTIGGLIWVVIRHRGRFKGLTVKGMILMAVLSLYYGFSTIGI 321
Query: 207 DNFAHIGGFMAGFLLGFVL 225
DN+ H+GG + GFL +L
Sbjct: 322 DNWCHVGGILTGFLAAMIL 340
>gi|456012071|gb|EMF45791.1| Rhomboid family protein [Planococcus halocryophilus Or1]
Length = 202
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 63/135 (46%), Gaps = 23/135 (17%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
+ E Q WR T ++LH+GV+HLL NM SL G LE+ G +R +YLL+GF +
Sbjct: 52 IAEGQWWRFFTPMFLHSGVMHLLFNMFSLFLFGPELERLTGKIRFITIYLLAGFFASAAT 111
Query: 171 LFL-----------------FNAVSLLVLLAAALL------TLVVIIAINLAVGILPHVD 207
FL F A LV L L +I+ + + P+++
Sbjct: 112 YFLQPLDYSHVGASGAIFGVFGAFGALVYYGGRALPQLKQIILPIIVISIVMTFLTPNIN 171
Query: 208 NFAHIGGFMAGFLLG 222
AHI G + GFL+G
Sbjct: 172 VTAHIAGMITGFLIG 186
>gi|255971815|ref|ZP_05422401.1| conserved hypothetical protein [Enterococcus faecalis T1]
gi|255962833|gb|EET95309.1| conserved hypothetical protein [Enterococcus faecalis T1]
Length = 230
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 39/193 (20%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ V H+ WR IT ++LH G +H++ NM++L +IG ++E +G R +YLLS
Sbjct: 43 GAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWRYLGIYLLS 102
Query: 163 GFGG--AYYLLFLFNAVS------LLVLLAA------------ALLTLV----VIIAINL 198
G G A + N+VS L L A A++ +V + I INL
Sbjct: 103 GIAGNIASFAFGTPNSVSAGASTALFGLFGAFVILGRHFRDNPAIMYMVQRYSMFIVINL 162
Query: 199 AVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
+ VD H+GG + G L+ A +P + ++H L
Sbjct: 163 LFNLFSSSVDMMGHVGGLIGGLLV------------ATAFAVPNREEAFNKHERIMATLI 210
Query: 258 IVALVL--LIVGF 268
+ LV+ L++GF
Sbjct: 211 FIFLVVICLLLGF 223
>gi|374581478|ref|ZP_09654572.1| putative membrane protein [Desulfosporosinus youngiae DSM 17734]
gi|374417560|gb|EHQ89995.1| putative membrane protein [Desulfosporosinus youngiae DSM 17734]
Length = 313
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 72/145 (49%), Gaps = 23/145 (15%)
Query: 108 DRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA 167
+ ++ + WR T +++H G +HL+ N+ + +G +E++FG R +Y LSG GG+
Sbjct: 170 NSLIQAGEIWRFFTSMFIHIGFMHLIFNLYAFWSLGPFIEERFGHWRFFTIYSLSGLGGS 229
Query: 168 YYLLFLFNAVS------LLVLLAAAL-------------LTLVVIIAINLAVGI---LPH 205
F A+S + LL A L + +++ + + +G +P
Sbjct: 230 IASFFFSPALSAGASGAIFGLLGALFYYSIKRPSLWKSGLGMNLVLVLLINLGFGLTMPG 289
Query: 206 VDNFAHIGGFMAGFLLGFVLLLRPQ 230
+DNFAH+GG + G + +LL +P
Sbjct: 290 IDNFAHLGGLLTGIITS-ILLTKPD 313
>gi|418695529|ref|ZP_13256548.1| peptidase, S54 family [Leptospira kirschneri str. H1]
gi|409956614|gb|EKO15536.1| peptidase, S54 family [Leptospira kirschneri str. H1]
Length = 514
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 75/168 (44%), Gaps = 32/168 (19%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQG--WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
F P +L + GA +R + G WRL+T +++HA HL N L+ I +E
Sbjct: 350 FFYPDGPSLLEWGA---NRRIETLAGQWWRLLTNVFVHASFPHLFFNGFGLIISAIFVEP 406
Query: 149 QFGFVRVGFVYLLSGF----------------GGAYYLLFLFNAVSLLVLLAA------- 185
G +R +Y+ SG G + + L+ A+ LVL+ A
Sbjct: 407 ILGRIRFLILYIFSGLCGSLASIVWYPNTISVGASGAIFGLYGAILGLVLMDAFLRDDKK 466
Query: 186 -ALLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFG 232
L+ +V I L G+ +DN +HIGG + G +LG +L QFG
Sbjct: 467 NVLIMIVTFILTGLLWGLFGGIDNASHIGGLVGGTILGIILF---QFG 511
>gi|124506059|ref|XP_001351627.1| rhomboid protease ROM4 [Plasmodium falciparum 3D7]
gi|23504554|emb|CAD51434.1| rhomboid protease ROM4 [Plasmodium falciparum 3D7]
Length = 759
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 68/153 (44%), Gaps = 32/153 (20%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLL 161
LG L + + + + +RL ++LH G +H+L N++ + I +E +G +R G ++ +
Sbjct: 445 LGGLNTNYIRNYGELYRLFWSMYLHGGFMHILFNVICQIQILWMIEPDWGSIRTGLLFFI 504
Query: 162 SGFGG----------------------------AYYLLFLFNAVSLLVLLAAALLTLVVI 193
SG G AYY+ + + L+ + ++
Sbjct: 505 SGVTGNLLSAVCDPCGVTIGSSGSLYGLIGALFAYYIEYW----KTIPRPCCVLIFMFLV 560
Query: 194 IAINLAVGILPHVDNFAHIGGFMAGFLLGFVLL 226
+ + VG+ + DN+AHIGG + G L GF +
Sbjct: 561 VMFGIIVGMFGYTDNYAHIGGCLGGVLFGFSTI 593
>gi|421036084|ref|ZP_15499101.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-S]
gi|392219936|gb|EIV45460.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-S]
Length = 252
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + + WR +T +LH G++H+ NMLSL IG LE+ FG R +Y + G +
Sbjct: 74 VAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAA 133
Query: 171 LFLF-NAV------SLLVLLAAALL----------TLVVIIAINLAVGI-LPHVDNFAHI 212
++L NAV ++ LL AAL+ T+++++ +N+ + I LP + H+
Sbjct: 134 MWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHM 193
Query: 213 GGFMAGFLLGFVLL 226
GG + G L LL
Sbjct: 194 GGLLFGVLSAGALL 207
>gi|28492976|ref|NP_787137.1| hypothetical protein TWT009 [Tropheryma whipplei str. Twist]
gi|28476016|gb|AAO44106.1| unknown [Tropheryma whipplei str. Twist]
Length = 212
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/123 (35%), Positives = 70/123 (56%), Gaps = 17/123 (13%)
Query: 115 QGWRLITCIWLHAGV--IHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYLLF 172
Q WR+ T ++LH+ +HLL NM SL ++G LEQ+ G R +Y +SG G A +++
Sbjct: 57 QPWRIFTSMFLHSTFTPLHLLFNMYSLWWLGSNLEQRIGSWRFLALYFISGLGAAVGIVY 116
Query: 173 L--FNAVSL-----LVLLAAALLTLVV-------IIAINLAVG-ILPHVDNFAHIGGFMA 217
L +N ++L + L AA + L + I+ +NL + +LP V AHIGG ++
Sbjct: 117 LQPYNTLTLGASGGIFGLLAAFIVLRIDSGQLWGIVGLNLIISFLLPGVSWQAHIGGLLS 176
Query: 218 GFL 220
GF+
Sbjct: 177 GFV 179
>gi|375098380|ref|ZP_09744643.1| putative membrane protein [Saccharomonospora cyanea NA-134]
gi|374659112|gb|EHR58990.1| putative membrane protein [Saccharomonospora cyanea NA-134]
Length = 333
Score = 53.1 bits (126), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 73/147 (49%), Gaps = 19/147 (12%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
G L + VV + WRL+T +LH G++HL NML+L +G LE G VR VY LS
Sbjct: 144 GVLWPEVVVLFDEWWRLLTSGFLHYGLLHLAMNMLALWVLGRDLEMLLGRVRFLAVYFLS 203
Query: 163 GF-GGAYYLLF----------------LFNAVSLLVL-LAAALLTLVVIIAINLAVGI-L 203
F GGA +F L A+ + VL L T + II +N+ + + +
Sbjct: 204 MFAGGAAVFVFGDPATGTAGASGAIYGLMGAILVAVLRLRLNPTTAIGIIVLNVIISVSI 263
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
P++ H+GG +AG + ++ P+
Sbjct: 264 PNISLLGHLGGLVAGAVAMVAMVYAPE 290
>gi|307710192|ref|ZP_07646636.1| rhomboid family protein [Streptococcus mitis SK564]
gi|307619172|gb|EFN98304.1| rhomboid family protein [Streptococcus mitis SK564]
Length = 224
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/174 (29%), Positives = 82/174 (47%), Gaps = 31/174 (17%)
Query: 96 SSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ TL + GA+ + + Q WRL + I++H G H + NMLSL ++G ++E+ FG +
Sbjct: 37 ADTLFQFGAMYGPAIRLFPEQIWRLFSAIFIHIGWEHFIVNMLSLYYLGRQVEEIFGSKQ 96
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSL-------LVLLAAALLTL----------------V 191
F+YLLSG G + +F+F+ SL L L AA++ L +
Sbjct: 97 FFFLYLLSGMMGNLF-VFVFSPKSLAAGASTSLYGLFAAIIILRYATRNPYIQQLGQSYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
+ +N+ +L P + HIGG + G L + +R ER A R
Sbjct: 156 TLFVVNIIGSVLIPGISLAGHIGGAVGGAFLAIIFPVR-----GERRMYSASQR 204
>gi|163838783|ref|YP_001623188.1| rhomboid family membrane protein [Renibacterium salmoninarum ATCC
33209]
gi|162952259|gb|ABY21774.1| rhomboid family membrane protein [Renibacterium salmoninarum ATCC
33209]
Length = 290
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 105 LEWDRVVHEHQGWRLITCIWLHAGVI--HLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
L + E + WR++T I+ H+ H+L NM SL +G LE G +R ++L+S
Sbjct: 107 LAYAPFATEQEPWRILTSIFTHSTTFLPHILFNMYSLYILGTVLEPVLGRLRFFALFLVS 166
Query: 163 GFGGAYYLLFLFNAVSLLVLLAAALLTL------------------VVIIAINLAVGILP 204
G G+ +L + S++V + A+ L +V++ +N +G LP
Sbjct: 167 GLAGSVGVLLIAPVDSVVVGASGAIFGLFGALFVLQLKRRGDLRQIIVLLVVNAVIGFLP 226
Query: 205 HVDNF--AHIGGFMAGFLLGFVLLLRP 229
+ AH+GG + G L+ +L+ P
Sbjct: 227 GANIAWQAHLGGLIGGALVAAILIYAP 253
>gi|315282195|ref|ZP_07870654.1| rhomboid family protein, partial [Listeria marthii FSL S4-120]
gi|313614157|gb|EFR87842.1| rhomboid family protein [Listeria marthii FSL S4-120]
Length = 302
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 71/148 (47%), Gaps = 22/148 (14%)
Query: 106 EWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG 165
+++ +++ + WR I+ I+LH G++HL +N + L +G E+ +G R + LL G
Sbjct: 7 KFNPLIYAGEWWRFISPIFLHNGLMHLASNAVMLYIVGAWAERIYGKWRYILILLLGGIC 66
Query: 166 G-----AYYLLFLFNAVSLLVLLAAALLTLVV----------------IIAINLAVGILP 204
G A + A + + + ALL LVV ++AINL + +
Sbjct: 67 GNVASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDVFS 126
Query: 205 -HVDNFAHIGGFMAGFLLGFVLLLRPQF 231
+D HIGG + GFLL L L QF
Sbjct: 127 TQIDIAGHIGGLVGGFLLAGALSLPKQF 154
>gi|428183558|gb|EKX52415.1| hypothetical protein GUITHDRAFT_161181 [Guillardia theta CCMP2712]
Length = 352
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/133 (30%), Positives = 62/133 (46%), Gaps = 26/133 (19%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FGGAYYLLFLFN 175
WRLIT I LHAG+ HLL N + GI+LE+++G ++ +Y+ +G +G +LF
Sbjct: 171 WRLITPIMLHAGLFHLLINAFTQCMFGIQLEREWGAAQIAIIYVCAGIYGNILSVLFAPQ 230
Query: 176 AVSL------LVLLAAA-------------------LLTLVVIIAINLAVGILPHVDNFA 210
A+S+ L A +L+L + VD A
Sbjct: 231 ALSIGCSGAIFGLFGAQVAYITGMWRQLGDLQKKMLILSLSLSFIFIFVFSFSVGVDMSA 290
Query: 211 HIGGFMAGFLLGF 223
H+GGF+AG ++G
Sbjct: 291 HMGGFVAGMVMGL 303
>gi|255974810|ref|ZP_05425396.1| membrane-associated serine protease [Enterococcus faecalis T2]
gi|255967682|gb|EET98304.1| membrane-associated serine protease [Enterococcus faecalis T2]
Length = 230
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/193 (28%), Positives = 87/193 (45%), Gaps = 39/193 (20%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ V H+ WR IT ++LH G +H++ NM++L +IG ++E +G R +YLLS
Sbjct: 43 GAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWRYLGIYLLS 102
Query: 163 GFGG--AYYLLFLFNAVS------LLVLLAA------------ALLTLV----VIIAINL 198
G G A + N+VS L L A A++ +V + I INL
Sbjct: 103 GIAGNIASFAFGTPNSVSAGASTALFGLFGAFVILGRHFRDNPAIMYMVQRYSMFIVINL 162
Query: 199 AVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLC 257
+ VD H+GG + G L+ A +P + ++H L
Sbjct: 163 LFNLFSSSVDMMGHVGGLIGGLLV------------ATAFAVPNRQEAFNKHERIMATLI 210
Query: 258 IVALVL--LIVGF 268
+ LV+ L++GF
Sbjct: 211 FIFLVVICLLLGF 223
>gi|242217140|ref|XP_002474372.1| predicted protein [Postia placenta Mad-698-R]
gi|220726479|gb|EED80427.1| predicted protein [Postia placenta Mad-698-R]
Length = 328
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 91/211 (43%), Gaps = 47/211 (22%)
Query: 114 HQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FG------- 165
+Q +R +T ++LHAG+IH L NML+ + + ++E++ G + +Y+ SG FG
Sbjct: 116 NQTFRFVTPVFLHAGIIHYLLNMLAQMTVSAQVEREMGSIFFIVLYMASGIFGRVNVLGG 175
Query: 166 ----------GAYYLLFLFNAVSLLVLLA---------AALLTLVVIIAINLAVGILPHV 206
GA +F A++ + LLA L L+V + + + +G +P
Sbjct: 176 NFALVGLPSVGASGAIFGTTAIAWIDLLAHWRYHPRPGTRLAWLIVELIVGIGLGFIP-- 233
Query: 207 DNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSRHNPYQYVLCIVALVLLIV 266
+ + F ++ P +RH + A+ + IV
Sbjct: 234 -SHLGGLLMGLLMGMAFYPIISP----------------STRHRAIVIGFRLAAIPIAIV 276
Query: 267 GFTVGLVMLFRGENGNDHCSWCHYLSCVPTS 297
F V L+ F + C+WC YLSC+PTS
Sbjct: 277 LFVV-LIRNFYKSDPYAACTWCRYLSCIPTS 306
>gi|323342857|ref|ZP_08083089.1| hypothetical protein HMPREF0357_11270 [Erysipelothrix rhusiopathiae
ATCC 19414]
gi|322463969|gb|EFY09163.1| hypothetical protein HMPREF0357_11270 [Erysipelothrix rhusiopathiae
ATCC 19414]
Length = 399
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 75/157 (47%), Gaps = 22/157 (14%)
Query: 102 LGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLE-----QQFGFVRV- 155
LGA +VH H+ +R IT +LH +HL+ N+++L +G+ +E +++ F +
Sbjct: 189 LGAFYKPFIVHAHEWFRFITAGFLHISFLHLIMNLMALRNLGVVMETVMEGKKYLFTLIA 248
Query: 156 ------GFVYLLS----GFGGAYYLLFLFNAVSLLVLLAAALLTLVV------IIAINLA 199
FV++L G G + L L A+ + + A+ V ++ INL
Sbjct: 249 GILMGNAFVFILDEGVIGLGISGGLFALLGAMCVYLFETKAMRNPKVMSQVFQVLFINLI 308
Query: 200 VGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAER 236
+ LP V AH+GG +AG L G V R + + +
Sbjct: 309 ISSLPGVSATAHLGGLIAGLLCGLVFSKRKDWDYLRK 345
>gi|83745575|ref|ZP_00942633.1| transmembrane hypothetical [Ralstonia solanacearum UW551]
gi|83727652|gb|EAP74772.1| transmembrane hypothetical [Ralstonia solanacearum UW551]
Length = 569
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 55/168 (32%), Positives = 77/168 (45%), Gaps = 30/168 (17%)
Query: 89 NPLFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQ 148
NPL P S G ++ V + WRL++ +LHAGV+HL NM+ L GI +E+
Sbjct: 228 NPLQTPISVLFSLGGNAAFE--VQHGEWWRLLSATFLHAGVLHLAINMVGLYATGIAVER 285
Query: 149 QFGFVRVGFVYLLSG-FGGAYYLLFLFN--------------AVSLLV-----------L 182
+G +YL +G G A L F A + LV
Sbjct: 286 IYGPAAYLLIYLGAGLLGSALSLSFAAQHAIGVGASGAVFGVAGAWLVAIGRYRGLMPQT 345
Query: 183 LAAALLT-LVVIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLR 228
L+ LLT L + + +LA G+ P VDN AHIGG + G +L +L R
Sbjct: 346 LSKRLLTQLGLFVLYSLAQGLTKPGVDNAAHIGGLVGGCMLAMILPAR 393
>gi|420866475|ref|ZP_15329864.1| rhomboid family protein [Mycobacterium abscessus 4S-0303]
gi|420871266|ref|ZP_15334648.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RA]
gi|420875716|ref|ZP_15339092.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RB]
gi|420988850|ref|ZP_15452006.1| rhomboid family protein [Mycobacterium abscessus 4S-0206]
gi|421040347|ref|ZP_15503355.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-R]
gi|421046065|ref|ZP_15509065.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-S]
gi|392065191|gb|EIT91040.1| rhomboid family protein [Mycobacterium abscessus 4S-0303]
gi|392067191|gb|EIT93039.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RB]
gi|392070736|gb|EIT96583.1| rhomboid family protein [Mycobacterium abscessus 4S-0726-RA]
gi|392183129|gb|EIV08780.1| rhomboid family protein [Mycobacterium abscessus 4S-0206]
gi|392221275|gb|EIV46798.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-R]
gi|392235518|gb|EIV61016.1| rhomboid family protein [Mycobacterium abscessus 4S-0116-S]
Length = 247
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + + WR +T +LH G++H+ NMLSL IG LE+ FG R +Y + G +
Sbjct: 69 VAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAA 128
Query: 171 LFLF-NAV------SLLVLLAAALL----------TLVVIIAINLAVGI-LPHVDNFAHI 212
++L NAV ++ LL AAL+ T+++++ +N+ + I LP + H+
Sbjct: 129 MWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHM 188
Query: 213 GGFMAGFLLGFVLL 226
GG + G L LL
Sbjct: 189 GGLLFGVLSAGALL 202
>gi|421228320|ref|ZP_15685016.1| rhomboid family protein [Streptococcus pneumoniae 2072047]
gi|395592728|gb|EJG52986.1| rhomboid family protein [Streptococcus pneumoniae 2072047]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 96 SSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ TL + GA+ + + Q WRL++ I++H G H + NMLSL ++G ++E+ FG +
Sbjct: 37 ADTLFRFGAMYGPAIRLFPEQVWRLLSAIFVHIGWEHFIVNMLSLYYLGRQVEEIFGSKQ 96
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSL 179
F+YLLSG G + +F+F+ SL
Sbjct: 97 FFFLYLLSGMMGNLF-VFVFSPTSL 120
>gi|392533728|ref|ZP_10280865.1| rhomboid-like protein [Pseudoalteromonas arctica A 37-1-2]
Length = 361
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 33/142 (23%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYL---------------- 160
W ++TC++LH ++HL+ NM L +G LE G R YL
Sbjct: 197 WTVLTCVFLHGSIMHLVGNMYFLYIVGDNLEDVLGHKRFLLWYLACGLLASFASYIVSPM 256
Query: 161 -----------LSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAINLAVGIL------ 203
++G G Y + F +++ + ++ L+ V AI L I
Sbjct: 257 SNIPGVGASGAIAGLFGMYLIWFRHASLTFMFVIYQKKLSAVWFFAIWLGFNIFGAVTGP 316
Query: 204 PHVDNFAHIGGFMAGFLLGFVL 225
+D AHIGGF+AG ++G++L
Sbjct: 317 DGIDYGAHIGGFIAGLIIGYIL 338
>gi|302552712|ref|ZP_07305054.1| rhomboid family protein [Streptomyces viridochromogenes DSM 40736]
gi|302470330|gb|EFL33423.1| rhomboid family protein [Streptomyces viridochromogenes DSM 40736]
Length = 296
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/143 (31%), Positives = 74/143 (51%), Gaps = 24/143 (16%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGA--YYLLF-- 172
+R++T ++ H + H+ NMLSL ++G LE G VR +YL+SG G+ YLL
Sbjct: 133 YRMVTSMFTHQEIWHIAFNMLSLWWLGGPLEAALGRVRYLALYLVSGLAGSALAYLLASP 192
Query: 173 -------------LFNAVSLLV-LLAAALLTLVVIIAINLAVGILP--HVDNFAHIGGFM 216
LF A ++L+ L + ++ ++AINL P ++ AHIGG +
Sbjct: 193 NTATLGASGAIFGLFGATAVLMRRLNYDMRPIIALLAINLIFTFSPGFNISWQAHIGGLV 252
Query: 217 AGFLLGFVLLLRPQFGWAERHQL 239
AG ++G+ ++ P+ ER L
Sbjct: 253 AGVVIGYAMVHAPR----ERRAL 271
>gi|332880624|ref|ZP_08448298.1| peptidase, S54 family [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|357046009|ref|ZP_09107639.1| peptidase, S54 family [Paraprevotella clara YIT 11840]
gi|332681612|gb|EGJ54535.1| peptidase, S54 family [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|355531015|gb|EHH00418.1| peptidase, S54 family [Paraprevotella clara YIT 11840]
Length = 476
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 57/121 (47%), Gaps = 25/121 (20%)
Query: 117 WRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGF------------ 164
WR++TC ++H G+IHL NM +L+FIG+ LE G R+ Y+LSG
Sbjct: 105 WRVLTCNYVHVGLIHLAMNMYALLFIGLFLEPLAGSRRMAMAYVLSGLYASLASLSVNAE 164
Query: 165 -------GGAYYLLFLFNAVSLL-----VLLAAALLTLVVIIAINLAVGILPH-VDNFAH 211
G + L LF A LL L+++ V I NL G+ VDN AH
Sbjct: 165 WIAAGASGAIFGLYGLFFAYLLLRRGGEERRKTLLISIAVFILYNLLFGMRDDSVDNAAH 224
Query: 212 I 212
+
Sbjct: 225 V 225
>gi|441213690|ref|ZP_20975936.1| peptidase, S54 family [Mycobacterium smegmatis MKD8]
gi|440625654|gb|ELQ87500.1| peptidase, S54 family [Mycobacterium smegmatis MKD8]
Length = 250
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 95 SSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
++ L++ AL+ + + +RL+T ++LH G +HLL NM +L +G LEQ G +R
Sbjct: 56 AAGALKRELALQPASIAAYDEYYRLVTSMFLHYGAMHLLFNMWALYVVGPPLEQWLGRLR 115
Query: 155 VGFVYLLSGFGGA--YYLLFLFNAVS 178
G +Y LSG GG+ Y+L N+ +
Sbjct: 116 FGVLYALSGLGGSVLVYMLSPLNSAT 141
>gi|270290405|ref|ZP_06196630.1| membrane-associated serine protease [Pediococcus acidilactici 7_4]
gi|270281186|gb|EFA27019.1| membrane-associated serine protease [Pediococcus acidilactici 7_4]
Length = 222
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 32/161 (19%)
Query: 110 VVHEHQGW-RLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSG-FGGA 167
++ + GW L T +++H G HLL NM++L FIG LEQ G R +YLLSG F
Sbjct: 47 MIKDGAGWASLFTSMFVHIGFEHLLFNMITLYFIGRLLEQVIGHGRFLLIYLLSGIFANV 106
Query: 168 YYLLF-------------LFNAVSLLVLLAAALLT----------LVVIIAINLAVGIL- 203
L F +F + + +++A +++ A+ + G+
Sbjct: 107 VSLAFAAPNSISAGASGAIFGIIGVWIMMAEQYRNYPFLAGMGRQMLIFSALGIVSGMFG 166
Query: 204 PHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQAR 244
++D FAH+GG +AGFLLG+ F + ++P + R
Sbjct: 167 TNIDIFAHLGGLVAGFLLGY------GFSFPNLGKVPLKKR 201
>gi|422727749|ref|ZP_16784179.1| peptidase, S54 family protein [Enterococcus faecalis TX0012]
gi|315151706|gb|EFT95722.1| peptidase, S54 family protein [Enterococcus faecalis TX0012]
Length = 236
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 40/64 (62%)
Query: 103 GALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLS 162
GA+ V H+ WR IT ++LH G +H++ NM++L +IG ++E +G R +YLLS
Sbjct: 49 GAMVRPLVAQNHEYWRFITPMFLHIGFMHIILNMVTLYYIGAQVEAIYGHWRYLGIYLLS 108
Query: 163 GFGG 166
G G
Sbjct: 109 GIAG 112
>gi|414584256|ref|ZP_11441396.1| rhomboid family protein [Mycobacterium abscessus 5S-1215]
gi|420881430|ref|ZP_15344797.1| rhomboid family protein [Mycobacterium abscessus 5S-0304]
gi|420884483|ref|ZP_15347843.1| rhomboid family protein [Mycobacterium abscessus 5S-0421]
gi|420887277|ref|ZP_15350635.1| rhomboid family protein [Mycobacterium abscessus 5S-0422]
gi|420896232|ref|ZP_15359571.1| rhomboid family protein [Mycobacterium abscessus 5S-0708]
gi|420901413|ref|ZP_15364744.1| rhomboid family protein [Mycobacterium abscessus 5S-0817]
gi|420907312|ref|ZP_15370630.1| rhomboid family protein [Mycobacterium abscessus 5S-1212]
gi|420974770|ref|ZP_15437960.1| rhomboid family protein [Mycobacterium abscessus 5S-0921]
gi|421052000|ref|ZP_15514994.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898 = JCM
15300]
gi|392080246|gb|EIU06072.1| rhomboid family protein [Mycobacterium abscessus 5S-0421]
gi|392086339|gb|EIU12164.1| rhomboid family protein [Mycobacterium abscessus 5S-0304]
gi|392093991|gb|EIU19787.1| rhomboid family protein [Mycobacterium abscessus 5S-0422]
gi|392095544|gb|EIU21339.1| rhomboid family protein [Mycobacterium abscessus 5S-0708]
gi|392098774|gb|EIU24568.1| rhomboid family protein [Mycobacterium abscessus 5S-0817]
gi|392105216|gb|EIU31002.1| rhomboid family protein [Mycobacterium abscessus 5S-1212]
gi|392119408|gb|EIU45176.1| rhomboid family protein [Mycobacterium abscessus 5S-1215]
gi|392159888|gb|EIU85581.1| rhomboid family protein [Mycobacterium abscessus 5S-0921]
gi|392240603|gb|EIV66096.1| rhomboid family protein [Mycobacterium massiliense CCUG 48898]
Length = 247
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + + WR +T +LH G++H+ NMLSL IG LE+ FG R +Y + G +
Sbjct: 69 VAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAA 128
Query: 171 LFLF-NAV------SLLVLLAAALL----------TLVVIIAINLAVGI-LPHVDNFAHI 212
++L NAV ++ LL AAL+ T+++++ +N+ + I LP + H+
Sbjct: 129 MWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHM 188
Query: 213 GGFMAGFLLGFVLL 226
GG + G L LL
Sbjct: 189 GGLLFGVLSAGALL 202
>gi|420912660|ref|ZP_15375972.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-R]
gi|420919114|ref|ZP_15382417.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-S]
gi|420924284|ref|ZP_15387580.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-S]
gi|420929944|ref|ZP_15393223.1| rhomboid family protein [Mycobacterium abscessus 6G-1108]
gi|420969638|ref|ZP_15432841.1| rhomboid family protein [Mycobacterium abscessus 3A-0810-R]
gi|420980281|ref|ZP_15443458.1| rhomboid family protein [Mycobacterium abscessus 6G-0212]
gi|420985667|ref|ZP_15448834.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-R]
gi|421009768|ref|ZP_15472877.1| rhomboid family protein [Mycobacterium abscessus 3A-0119-R]
gi|421010496|ref|ZP_15473600.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-R]
gi|421020930|ref|ZP_15483986.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-S]
gi|421025708|ref|ZP_15488751.1| rhomboid family protein [Mycobacterium abscessus 3A-0731]
gi|421031230|ref|ZP_15494260.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-R]
gi|392112005|gb|EIU37775.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-S]
gi|392114654|gb|EIU40423.1| rhomboid family protein [Mycobacterium abscessus 6G-0125-R]
gi|392126932|gb|EIU52683.1| rhomboid family protein [Mycobacterium abscessus 6G-1108]
gi|392128937|gb|EIU54687.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-S]
gi|392164559|gb|EIU90248.1| rhomboid family protein [Mycobacterium abscessus 6G-0212]
gi|392170663|gb|EIU96341.1| rhomboid family protein [Mycobacterium abscessus 6G-0728-R]
gi|392195374|gb|EIV20993.1| rhomboid family protein [Mycobacterium abscessus 3A-0119-R]
gi|392206653|gb|EIV32236.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-S]
gi|392209231|gb|EIV34803.1| rhomboid family protein [Mycobacterium abscessus 3A-0731]
gi|392216607|gb|EIV42150.1| rhomboid family protein [Mycobacterium abscessus 3A-0122-R]
gi|392219112|gb|EIV44637.1| rhomboid family protein [Mycobacterium abscessus 3A-0930-R]
gi|392245294|gb|EIV70772.1| rhomboid family protein [Mycobacterium abscessus 3A-0810-R]
Length = 247
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 70/134 (52%), Gaps = 18/134 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGGAYYL 170
V + + WR +T +LH G++H+ NMLSL IG LE+ FG R +Y + G +
Sbjct: 69 VAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAA 128
Query: 171 LFLF-NAV------SLLVLLAAALL----------TLVVIIAINLAVGI-LPHVDNFAHI 212
++L NAV ++ LL AAL+ T+++++ +N+ + I LP + H+
Sbjct: 129 MWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHM 188
Query: 213 GGFMAGFLLGFVLL 226
GG + G L LL
Sbjct: 189 GGLLFGVLSAGALL 202
>gi|297570706|ref|YP_003696480.1| rhomboid family protein [Arcanobacterium haemolyticum DSM 20595]
gi|296931053|gb|ADH91861.1| Rhomboid family protein [Arcanobacterium haemolyticum DSM 20595]
Length = 210
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 65/132 (49%), Gaps = 23/132 (17%)
Query: 113 EHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFGG--AYYL 170
E + WR +T +LH+G +H+L N+++L+F+G LE R +YL S GG A Y
Sbjct: 60 EAEPWRFLTGAFLHSGFMHILFNVMALIFLGAELEPALKSGRFAALYLGSAIGGNAAVYA 119
Query: 171 L----------------FLFNAVSLLVLLAAALLT----LVVIIAINLAVGI-LPHVDNF 209
+F L++L AL T +++++ IN + I P +
Sbjct: 120 WSAWTGEWNTAAVGASGAIFGLFGALIVLTRALHTDMRGILILLGINALIAITTPQISWQ 179
Query: 210 AHIGGFMAGFLL 221
AH+GGF+ G +L
Sbjct: 180 AHLGGFLTGIIL 191
>gi|444387994|ref|ZP_21185988.1| peptidase, S54 family [Streptococcus pneumoniae PCS125219]
gi|444391207|ref|ZP_21189120.1| peptidase, S54 family [Streptococcus pneumoniae PCS70012]
gi|444393800|ref|ZP_21191421.1| peptidase, S54 family [Streptococcus pneumoniae PCS81218]
gi|444251168|gb|ELU57641.1| peptidase, S54 family [Streptococcus pneumoniae PCS125219]
gi|444255365|gb|ELU61721.1| peptidase, S54 family [Streptococcus pneumoniae PCS70012]
gi|444255622|gb|ELU61969.1| peptidase, S54 family [Streptococcus pneumoniae PCS81218]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 60/102 (58%), Gaps = 2/102 (1%)
Query: 96 SSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ TL + GA+ + + Q WRL++ I++H G H + NMLSL ++G ++E+ FG +
Sbjct: 37 ADTLFRFGAMYGPAIRLFPEQVWRLLSAIFVHIGWEHFIVNMLSLYYLGRQVEEIFGSKQ 96
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLVVIIAI 196
F+YLLSG G + +F+F+ SL V + +L L I +
Sbjct: 97 FFFLYLLSGMMGNLF-VFVFSPKSLAVGASTSLYGLFAAIIV 137
>gi|57640721|ref|YP_183199.1| integral membrane protein rhomboid-like protein [Thermococcus
kodakarensis KOD1]
gi|57159045|dbj|BAD84975.1| integral membrane protein Rhomboid homolog [Thermococcus
kodakarensis KOD1]
Length = 206
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 79/159 (49%), Gaps = 24/159 (15%)
Query: 97 STLQKLGALEWDRVVHEH-QGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRV 155
S L LG +W+ V + W+L T +++H +IH+ NM L+ +G +LE+ G RV
Sbjct: 42 SVLALLG--QWNYAVLNYGYWWQLFTAMFVHVNIIHIFFNMYFLLTMGRQLERVLGPRRV 99
Query: 156 GFVYLLSGFGGAYYLLFLFNAVSLLVLLAAALLTLV-VIIAINLAVG------------- 201
Y++SG G LFL +++ + AL +V +I I+ VG
Sbjct: 100 VMTYIVSGLVGNVLTLFLKPPMTVSAGASGALFGIVGALITISGVVGGNMQAAMMNAFFL 159
Query: 202 -----ILPHVDNFAHIGGFMAGFLLGFVL--LLRPQFGW 233
+LP V+ +AH+GG +AG +G+ ++R + W
Sbjct: 160 FLINSVLPGVNAYAHLGGLLAGIAIGYYYGKVIRRRLTW 198
>gi|262409313|ref|ZP_06085856.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|294644959|ref|ZP_06722693.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CC
2a]
gi|294805963|ref|ZP_06764830.1| peptidase, S54 (rhomboid) family protein [Bacteroides xylanisolvens
SD CC 1b]
gi|345509393|ref|ZP_08788992.1| hypothetical protein BSAG_03733 [Bacteroides sp. D1]
gi|229446228|gb|EEO52019.1| hypothetical protein BSAG_03733 [Bacteroides sp. D1]
gi|262352765|gb|EEZ01862.1| conserved hypothetical protein [Bacteroides sp. 2_1_22]
gi|292639680|gb|EFF57964.1| peptidase, S54 (rhomboid) family protein [Bacteroides ovatus SD CC
2a]
gi|294446845|gb|EFG15445.1| peptidase, S54 (rhomboid) family protein [Bacteroides xylanisolvens
SD CC 1b]
Length = 584
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 50/172 (29%), Positives = 81/172 (47%), Gaps = 25/172 (14%)
Query: 91 LFGPSSSTLQKLGALEWDRVVHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQF 150
+ PS+ +L K GA ++ + WR +TC ++H G HLL NM + +++G+ LE
Sbjct: 177 IMSPSTLSLLKWGA-DFGPLTLTGDWWRAVTCNFIHIGAFHLLMNMYAFMYVGLLLEGLI 235
Query: 151 GFVRVGFVYLLSGFGGAYY------------------------LLFLFNAVSLLVLLAAA 186
G R+ YLL+G A + L FLF A
Sbjct: 236 GSRRMFMSYLLTGLCSAVFSLYMHGETISAGASGAIFGLYGIFLAFLFFHRIAKEQRKAL 295
Query: 187 LLTLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQ 238
L ++++ + NL G+ +DN AHIGG ++GFLLG + + +F A+ +
Sbjct: 296 LTSILIFVGYNLVYGMKAGIDNAAHIGGLLSGFLLGIIYVCSYKFEKADAQR 347
>gi|419714376|ref|ZP_14241793.1| rhomboid family protein [Mycobacterium abscessus M94]
gi|382945655|gb|EIC69948.1| rhomboid family protein [Mycobacterium abscessus M94]
Length = 247
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/134 (32%), Positives = 69/134 (51%), Gaps = 18/134 (13%)
Query: 111 VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVRVGFVYLLSGFG-GAYY 169
V + + WR +T +LH G++H+ NMLSL IG LE+ FG R +Y + G A
Sbjct: 69 VAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAA 128
Query: 170 LLFLFNAV------SLLVLLAAALL----------TLVVIIAINLAVGI-LPHVDNFAHI 212
+ F NAV ++ LL AAL+ T+++++ +N+ + I LP + H+
Sbjct: 129 MWFSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHM 188
Query: 213 GGFMAGFLLGFVLL 226
GG + G L LL
Sbjct: 189 GGLLFGVLSAGALL 202
>gi|417924742|ref|ZP_12568174.1| peptidase, S54 family [Streptococcus mitis SK569]
gi|342835549|gb|EGU69790.1| peptidase, S54 family [Streptococcus mitis SK569]
Length = 225
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 80/160 (50%), Gaps = 26/160 (16%)
Query: 96 SSTLQKLGALEWDRV-VHEHQGWRLITCIWLHAGVIHLLANMLSLVFIGIRLEQQFGFVR 154
+ TL + GA+ + + Q WRL + I++H G H + NMLSL ++G ++E+ FG +
Sbjct: 37 ADTLFRFGAMYGPAIRLFPEQVWRLFSAIFVHIGWEHFIVNMLSLYYLGRQVEEIFGSKK 96
Query: 155 VGFVYLLSGFGGAYYLLFLFNAVSL-------LVLLAAALLTL----------------V 191
F+YLLSG G + +F+F+ SL L L AA++ L +
Sbjct: 97 FFFLYLLSGMMGNLF-VFVFSPKSLAAGASTSLYGLFAAIIVLRYATRNPYIQQLGQSYL 155
Query: 192 VIIAINLAVGIL-PHVDNFAHIGGFMAGFLLGFVLLLRPQ 230
+ +N+ +L P + HIGG + G LL + +R +
Sbjct: 156 TLFVVNIIGSVLIPGISLAGHIGGAVGGALLAVIFPVRGE 195
>gi|340380008|ref|XP_003388516.1| PREDICTED: inactive rhomboid protein 1-like [Amphimedon
queenslandica]
Length = 524
Score = 52.8 bits (125), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 44/175 (25%), Positives = 77/175 (44%), Gaps = 39/175 (22%)
Query: 153 VRVGFVYLLSGFGG---------------AYYLLFLFNAVSLLVLL---------AAALL 188
+RV +Y++SG GG A LF V L+ LL L
Sbjct: 351 LRVILIYVISGVGGLLISGIFIPETVSVGASGSLFGLLGVQLVELLQGWKWVKNPCVQLT 410
Query: 189 TLVVIIAINLAVGILPHVDNFAHIGGFMAGFLLGFVLLLRPQFGWAERHQLPAQARVKSR 248
L++ I L +G LP++DN+A+IGGF+ G + FV + G ++ +
Sbjct: 411 KLLIFDIILLVLGTLPYIDNYANIGGFLFGTVSAFVFVPYISVGKWDKVK---------- 460
Query: 249 HNPYQYVLCIVALVLLIVGFTVGLVMLFRGENGNDHCSWCHYLSCVPTSKWKCGN 303
++ + + +L+ F V + + + N CSWC Y++C+P ++ C +
Sbjct: 461 ----KFTIVTLFFPVLVFMFLVAIFFFYVLPDPN-FCSWCSYINCIPYTETFCDD 510
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.328 0.143 0.468
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,165,234,904
Number of Sequences: 23463169
Number of extensions: 219723616
Number of successful extensions: 831757
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3200
Number of HSP's successfully gapped in prelim test: 1040
Number of HSP's that attempted gapping in prelim test: 823919
Number of HSP's gapped (non-prelim): 5641
length of query: 303
length of database: 8,064,228,071
effective HSP length: 141
effective length of query: 162
effective length of database: 9,050,888,538
effective search space: 1466243943156
effective search space used: 1466243943156
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 76 (33.9 bits)