Query 045960
Match_columns 300
No_of_seqs 141 out of 497
Neff 6.5
Searched_HMMs 29240
Date Mon Mar 25 12:35:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045960.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045960hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2efj_A 3,7-dimethylxanthine me 100.0 6.3E-86 2.2E-90 636.7 29.5 297 1-300 53-378 (384)
2 1m6e_X S-adenosyl-L-methionnin 100.0 4.7E-86 1.6E-90 632.9 25.0 288 1-300 52-357 (359)
3 3b5i_A S-adenosyl-L-methionine 100.0 3.5E-81 1.2E-85 602.4 28.5 291 1-298 53-374 (374)
4 3ccf_A Cyclopropane-fatty-acyl 99.4 4.9E-11 1.7E-15 108.0 20.8 143 92-281 114-257 (279)
5 2p35_A Trans-aconitate 2-methy 99.3 7.3E-11 2.5E-15 104.7 18.8 200 3-281 36-236 (259)
6 2yqz_A Hypothetical protein TT 99.2 5.3E-10 1.8E-14 99.2 17.6 218 2-300 41-262 (263)
7 3bus_A REBM, methyltransferase 99.1 1.6E-08 5.4E-13 90.5 21.1 142 82-277 116-257 (273)
8 3f4k_A Putative methyltransfer 99.0 5.2E-08 1.8E-12 86.2 21.7 208 3-300 49-257 (257)
9 3hem_A Cyclopropane-fatty-acyl 99.0 1.2E-07 4.1E-12 86.6 23.4 155 93-294 135-299 (302)
10 3ujc_A Phosphoethanolamine N-m 99.0 1.4E-08 4.9E-13 89.8 16.5 192 2-281 57-251 (266)
11 3dtn_A Putative methyltransfer 99.0 4.6E-09 1.6E-13 91.9 11.5 170 2-223 46-217 (234)
12 3sm3_A SAM-dependent methyltra 98.9 1.3E-08 4.3E-13 88.4 13.8 122 82-223 88-210 (235)
13 3kkz_A Uncharacterized protein 98.9 1.2E-07 4E-12 84.9 18.9 150 2-221 48-197 (267)
14 2o57_A Putative sarcosine dime 98.9 2.5E-07 8.6E-12 83.9 20.2 151 2-220 84-234 (297)
15 3hnr_A Probable methyltransfer 98.9 1.2E-08 4.1E-13 88.2 10.6 160 2-225 47-206 (220)
16 1kpg_A CFA synthase;, cyclopro 98.8 8.5E-07 2.9E-11 79.9 22.7 97 91-220 126-228 (287)
17 1vl5_A Unknown conserved prote 98.8 7.5E-08 2.5E-12 85.7 14.8 103 83-223 91-193 (260)
18 3g5t_A Trans-aconitate 3-methy 98.8 2.6E-07 8.9E-12 84.2 18.3 148 94-276 112-275 (299)
19 1xxl_A YCGJ protein; structura 98.8 4.1E-07 1.4E-11 80.2 17.8 102 84-223 76-177 (239)
20 4gek_A TRNA (CMO5U34)-methyltr 98.8 4.4E-08 1.5E-12 89.0 11.4 163 3-215 73-240 (261)
21 3mgg_A Methyltransferase; NYSG 98.8 5.8E-08 2E-12 87.0 12.1 161 2-223 39-201 (276)
22 3h2b_A SAM-dependent methyltra 98.7 4E-08 1.4E-12 84.0 10.1 96 82-222 89-184 (203)
23 2p7i_A Hypothetical protein; p 98.7 2.1E-07 7.1E-12 81.0 14.3 97 90-220 98-199 (250)
24 4htf_A S-adenosylmethionine-de 98.7 2.8E-07 9.6E-12 83.2 14.9 111 84-223 124-235 (285)
25 1nkv_A Hypothetical protein YJ 98.7 4.5E-07 1.5E-11 80.0 15.7 96 82-219 91-186 (256)
26 2fk8_A Methoxy mycolic acid sy 98.7 7.9E-07 2.7E-11 81.6 17.4 100 94-220 154-254 (318)
27 3dh0_A SAM dependent methyltra 98.7 2.6E-07 8.8E-12 79.7 13.2 144 2-221 39-182 (219)
28 2aot_A HMT, histamine N-methyl 98.7 2.3E-07 7.7E-12 84.6 13.4 89 91-218 131-219 (292)
29 3ou2_A SAM-dependent methyltra 98.7 2.8E-07 9.5E-12 79.0 13.2 157 3-221 49-206 (218)
30 3lcc_A Putative methyl chlorid 98.7 1.4E-07 4.7E-12 82.7 11.3 142 3-223 69-210 (235)
31 3cc8_A Putative methyltransfer 98.6 5.7E-07 2E-11 77.4 14.6 101 90-223 88-188 (230)
32 3l8d_A Methyltransferase; stru 98.6 4.5E-07 1.5E-11 79.2 13.5 146 2-220 55-200 (242)
33 3ege_A Putative methyltransfer 98.6 1.2E-06 4.1E-11 78.3 14.8 148 2-225 36-183 (261)
34 1vlm_A SAM-dependent methyltra 98.6 1.2E-06 4.2E-11 76.0 14.2 91 91-220 98-188 (219)
35 3dli_A Methyltransferase; PSI- 98.6 5.2E-07 1.8E-11 79.4 11.9 90 90-221 96-185 (240)
36 3bkx_A SAM-dependent methyltra 98.5 4.3E-06 1.5E-10 74.5 17.7 167 2-220 45-219 (275)
37 3bgv_A MRNA CAP guanine-N7 met 98.5 9.6E-07 3.3E-11 81.0 13.6 100 93-221 112-233 (313)
38 1ri5_A MRNA capping enzyme; me 98.5 2E-06 6.9E-11 77.3 15.4 106 84-221 121-251 (298)
39 3e8s_A Putative SAM dependent 98.5 3.5E-07 1.2E-11 78.6 9.7 93 91-219 112-208 (227)
40 1xtp_A LMAJ004091AAA; SGPP, st 98.5 4.5E-07 1.6E-11 79.8 10.2 93 83-220 146-238 (254)
41 3dlc_A Putative S-adenosyl-L-m 98.5 1.2E-06 4E-11 74.8 12.5 157 3-220 46-203 (219)
42 3g5l_A Putative S-adenosylmeth 98.5 6.1E-08 2.1E-12 85.8 4.4 113 83-220 96-216 (253)
43 3e23_A Uncharacterized protein 98.5 3.5E-07 1.2E-11 78.6 9.0 86 92-222 99-184 (211)
44 3vc1_A Geranyl diphosphate 2-C 98.5 3.3E-06 1.1E-10 77.5 15.8 95 84-220 174-269 (312)
45 4hg2_A Methyltransferase type 98.5 1.6E-06 5.4E-11 78.6 13.0 66 84-176 88-153 (257)
46 3lst_A CALO1 methyltransferase 98.4 7.7E-07 2.6E-11 83.3 10.6 150 2-219 186-335 (348)
47 3reo_A (ISO)eugenol O-methyltr 98.4 4.2E-06 1.4E-10 79.1 15.3 151 2-220 205-355 (368)
48 1y8c_A S-adenosylmethionine-de 98.4 8.9E-07 3E-11 77.1 9.8 106 2-157 39-145 (246)
49 3ocj_A Putative exported prote 98.4 3E-06 1E-10 77.5 13.2 162 2-219 120-290 (305)
50 3mcz_A O-methyltransferase; ad 98.4 1.8E-06 6.1E-11 80.4 11.8 154 2-216 181-335 (352)
51 1pjz_A Thiopurine S-methyltran 98.4 1.6E-06 5.6E-11 74.9 10.5 79 94-222 100-178 (203)
52 3dp7_A SAM-dependent methyltra 98.4 2.9E-06 9.9E-11 80.0 13.0 155 3-218 182-340 (363)
53 4a6d_A Hydroxyindole O-methylt 98.4 2.7E-06 9.4E-11 80.1 12.7 151 3-218 182-332 (353)
54 3p9c_A Caffeic acid O-methyltr 98.4 4.7E-06 1.6E-10 78.8 14.3 151 2-220 203-353 (364)
55 2vdw_A Vaccinia virus capping 98.4 2E-06 6.7E-11 79.6 11.2 107 91-221 125-247 (302)
56 3i53_A O-methyltransferase; CO 98.4 1.8E-06 6E-11 80.0 10.8 151 2-220 171-321 (332)
57 2xvm_A Tellurite resistance pr 98.4 3E-06 1E-10 71.4 11.3 87 84-220 87-173 (199)
58 3bkw_A MLL3908 protein, S-aden 98.4 2.9E-06 9.9E-11 73.9 11.5 115 82-220 94-214 (243)
59 3i9f_A Putative type 11 methyl 98.4 8.4E-06 2.9E-10 67.4 13.7 80 89-220 69-148 (170)
60 2ex4_A Adrenal gland protein A 98.4 1.8E-06 6.1E-11 75.9 10.1 91 84-220 135-225 (241)
61 2kw5_A SLR1183 protein; struct 98.4 5.8E-06 2E-10 70.3 12.9 94 83-224 82-175 (202)
62 3d2l_A SAM-dependent methyltra 98.3 3.8E-06 1.3E-10 73.1 11.9 44 94-156 95-139 (243)
63 3pfg_A N-methyltransferase; N, 98.3 2.9E-06 1E-10 75.4 10.5 44 93-155 108-152 (263)
64 3g2m_A PCZA361.24; SAM-depende 98.3 1.1E-06 3.8E-11 80.0 7.9 103 93-222 148-276 (299)
65 2a14_A Indolethylamine N-methy 98.3 1.3E-06 4.5E-11 78.4 8.1 86 93-221 154-239 (263)
66 2gs9_A Hypothetical protein TT 98.3 3.8E-06 1.3E-10 72.0 10.6 81 90-207 90-170 (211)
67 2gb4_A Thiopurine S-methyltran 98.3 1.3E-05 4.4E-10 72.2 14.5 89 84-222 140-229 (252)
68 4fsd_A Arsenic methyltransfera 98.3 8.4E-06 2.9E-10 77.4 13.8 48 90-159 161-208 (383)
69 3gwz_A MMCR; methyltransferase 98.3 1.2E-05 4E-10 75.9 14.6 152 2-219 204-355 (369)
70 2qe6_A Uncharacterized protein 98.3 5.8E-06 2E-10 75.3 12.1 97 90-226 152-249 (274)
71 2r3s_A Uncharacterized protein 98.3 5.7E-06 1.9E-10 76.1 11.7 156 2-219 167-322 (335)
72 2ip2_A Probable phenazine-spec 98.3 2.3E-05 7.9E-10 72.3 15.7 151 3-220 170-322 (334)
73 2i62_A Nicotinamide N-methyltr 98.3 7.2E-06 2.5E-10 72.3 11.6 87 94-223 156-242 (265)
74 3ggd_A SAM-dependent methyltra 98.2 9.3E-06 3.2E-10 71.2 11.9 94 95-222 124-221 (245)
75 4e2x_A TCAB9; kijanose, tetron 98.2 2.2E-06 7.5E-11 81.8 7.8 88 91-221 167-254 (416)
76 2p8j_A S-adenosylmethionine-de 98.2 3.4E-05 1.2E-09 65.6 14.0 89 91-211 85-175 (209)
77 3m70_A Tellurite resistance pr 98.2 5.2E-06 1.8E-10 74.8 9.3 137 2-218 122-258 (286)
78 1qzz_A RDMB, aclacinomycin-10- 98.2 1.2E-05 4.1E-10 75.3 11.9 155 2-221 184-340 (374)
79 3jwh_A HEN1; methyltransferase 98.2 4.1E-06 1.4E-10 72.3 8.0 152 2-217 31-189 (217)
80 2ld4_A Anamorsin; methyltransf 98.2 2.3E-05 8E-10 65.4 12.4 71 91-215 59-130 (176)
81 1x19_A CRTF-related protein; m 98.2 1.5E-05 5E-10 74.7 12.0 157 2-220 192-348 (359)
82 3bxo_A N,N-dimethyltransferase 98.1 2.6E-05 8.9E-10 67.6 12.8 46 93-157 98-144 (239)
83 3giw_A Protein of unknown func 98.1 7.5E-06 2.6E-10 75.4 9.3 91 98-226 163-254 (277)
84 1tw3_A COMT, carminomycin 4-O- 98.1 2.9E-05 1E-09 72.3 13.3 156 2-222 185-341 (360)
85 1fp1_D Isoliquiritigenin 2'-O- 98.1 1.6E-05 5.4E-10 75.0 11.5 150 2-220 211-360 (372)
86 2zfu_A Nucleomethylin, cerebra 98.1 8E-06 2.7E-10 70.2 8.3 68 91-219 111-178 (215)
87 1fp2_A Isoflavone O-methyltran 98.1 2.5E-05 8.7E-10 72.9 12.3 148 2-219 190-340 (352)
88 3jwg_A HEN1, methyltransferase 98.1 1.7E-05 5.9E-10 68.3 10.3 158 2-220 31-192 (219)
89 1zg3_A Isoflavanone 4'-O-methy 98.1 1.4E-05 4.7E-10 74.9 10.3 149 2-219 195-346 (358)
90 3ofk_A Nodulation protein S; N 98.1 1.5E-05 5.1E-10 68.4 9.8 47 92-157 111-157 (216)
91 3cgg_A SAM-dependent methyltra 98.1 3.3E-05 1.1E-09 64.3 11.4 77 84-218 96-173 (195)
92 1ve3_A Hypothetical protein PH 98.1 1.7E-05 5.7E-10 68.3 9.8 54 84-157 92-145 (227)
93 3g07_A 7SK snRNA methylphospha 98.1 3.2E-06 1.1E-10 77.2 5.2 92 91-217 173-266 (292)
94 1yzh_A TRNA (guanine-N(7)-)-me 97.9 3.8E-05 1.3E-09 66.3 9.3 166 3-218 44-211 (214)
95 3gu3_A Methyltransferase; alph 97.9 6.4E-05 2.2E-09 67.9 10.8 158 2-219 24-189 (284)
96 3thr_A Glycine N-methyltransfe 97.9 1.6E-05 5.5E-10 71.6 6.2 52 90-156 125-177 (293)
97 2avn_A Ubiquinone/menaquinone 97.8 3.3E-05 1.1E-09 68.7 7.6 102 90-220 109-213 (260)
98 4df3_A Fibrillarin-like rRNA/T 97.8 8.8E-05 3E-09 66.5 9.9 105 3-157 80-185 (233)
99 2g72_A Phenylethanolamine N-me 97.8 4.3E-05 1.5E-09 69.0 7.0 90 91-223 170-259 (289)
100 1dus_A MJ0882; hypothetical pr 97.7 0.00023 7.9E-09 59.0 10.0 52 84-157 109-160 (194)
101 1ej0_A FTSJ; methyltransferase 97.6 9E-05 3.1E-09 60.3 6.4 56 91-157 84-139 (180)
102 2fca_A TRNA (guanine-N(7)-)-me 97.6 0.00026 8.8E-09 61.5 9.6 129 3-180 41-171 (213)
103 2plw_A Ribosomal RNA methyltra 97.6 0.00049 1.7E-08 58.1 10.6 55 91-156 102-156 (201)
104 3hp7_A Hemolysin, putative; st 97.5 0.00038 1.3E-08 64.4 10.1 87 91-221 147-233 (291)
105 3q7e_A Protein arginine N-meth 97.5 0.00033 1.1E-08 65.7 9.7 103 3-152 69-171 (349)
106 3mq2_A 16S rRNA methyltransfer 97.5 0.00056 1.9E-08 58.7 10.2 153 2-222 29-186 (218)
107 3dmg_A Probable ribosomal RNA 97.5 0.00048 1.6E-08 65.7 10.6 105 3-154 236-340 (381)
108 3grz_A L11 mtase, ribosomal pr 97.5 0.0011 3.6E-08 56.4 11.3 47 82-155 114-160 (205)
109 2pxx_A Uncharacterized protein 97.4 0.00031 1.1E-08 59.4 7.0 62 90-158 102-163 (215)
110 3mti_A RRNA methylase; SAM-dep 97.4 0.00067 2.3E-08 56.6 8.9 52 91-155 85-136 (185)
111 3lbf_A Protein-L-isoaspartate 97.4 0.00035 1.2E-08 59.6 7.2 47 82-156 130-176 (210)
112 3r0q_C Probable protein argini 97.4 0.00028 9.4E-09 67.0 7.1 104 3-154 66-169 (376)
113 1zx0_A Guanidinoacetate N-meth 97.4 0.00034 1.2E-08 61.1 7.1 54 82-153 113-169 (236)
114 1wzn_A SAM-dependent methyltra 97.3 0.0014 4.7E-08 57.3 10.9 104 2-156 43-147 (252)
115 3uwp_A Histone-lysine N-methyl 97.3 0.00055 1.9E-08 66.5 8.9 49 82-153 237-287 (438)
116 3opn_A Putative hemolysin; str 97.3 9.3E-05 3.2E-09 65.8 2.6 67 136-221 119-185 (232)
117 3p9n_A Possible methyltransfer 97.3 0.0014 4.8E-08 55.1 9.7 47 91-158 109-157 (189)
118 3q87_B N6 adenine specific DNA 97.2 0.001 3.6E-08 55.4 8.5 57 84-155 68-124 (170)
119 3dxy_A TRNA (guanine-N(7)-)-me 97.2 0.00035 1.2E-08 61.2 5.8 111 3-154 37-150 (218)
120 3hm2_A Precorrin-6Y C5,15-meth 97.2 0.00072 2.4E-08 55.6 7.3 101 2-156 27-129 (178)
121 3p2e_A 16S rRNA methylase; met 97.2 0.0025 8.4E-08 56.0 11.2 72 132-223 117-188 (225)
122 1af7_A Chemotaxis receptor met 97.2 0.0018 6.2E-08 59.1 9.8 40 93-152 211-250 (274)
123 3e05_A Precorrin-6Y C5,15-meth 97.1 0.0018 6.3E-08 54.9 9.0 101 3-155 43-143 (204)
124 3iv6_A Putative Zn-dependent a 97.1 0.00094 3.2E-08 60.6 7.6 42 93-155 108-149 (261)
125 1fbn_A MJ fibrillarin homologu 97.1 0.0036 1.2E-07 54.4 11.1 22 134-155 158-179 (230)
126 2fyt_A Protein arginine N-meth 97.1 0.0014 4.7E-08 61.3 8.7 102 3-151 67-168 (340)
127 2pjd_A Ribosomal RNA small sub 97.1 0.00015 5.2E-09 67.6 1.9 106 3-155 199-304 (343)
128 3lpm_A Putative methyltransfer 97.1 0.005 1.7E-07 54.6 11.6 123 3-154 52-176 (259)
129 3ckk_A TRNA (guanine-N(7)-)-me 97.0 0.0069 2.4E-07 53.5 12.3 71 88-182 116-188 (235)
130 2nyu_A Putative ribosomal RNA 97.0 0.0037 1.3E-07 52.3 9.9 114 3-155 25-146 (196)
131 1l3i_A Precorrin-6Y methyltran 97.0 0.0023 7.9E-08 52.7 8.4 37 94-155 99-135 (192)
132 3eey_A Putative rRNA methylase 97.0 0.0034 1.2E-07 52.7 9.4 115 3-155 25-140 (197)
133 1vbf_A 231AA long hypothetical 97.0 0.0016 5.5E-08 56.2 7.5 45 84-156 123-167 (231)
134 1jsx_A Glucose-inhibited divis 97.0 0.0031 1E-07 53.4 9.1 98 3-154 68-165 (207)
135 4dcm_A Ribosomal RNA large sub 97.0 0.0015 5.1E-08 62.1 7.8 111 2-154 224-334 (375)
136 1g6q_1 HnRNP arginine N-methyl 97.0 0.003 1E-07 58.5 9.7 102 3-151 41-142 (328)
137 3evz_A Methyltransferase; NYSG 97.0 0.0071 2.4E-07 52.0 11.4 60 91-155 119-180 (230)
138 2yxe_A Protein-L-isoaspartate 97.0 0.0013 4.3E-08 56.3 6.4 101 2-156 79-179 (215)
139 3id6_C Fibrillarin-like rRNA/T 96.9 0.0035 1.2E-07 55.9 8.8 18 3-20 79-96 (232)
140 1u2z_A Histone-lysine N-methyl 96.8 0.0058 2E-07 59.4 10.8 38 93-153 321-358 (433)
141 2nxc_A L11 mtase, ribosomal pr 96.8 0.0035 1.2E-07 55.8 8.3 47 83-155 173-219 (254)
142 1nt2_A Fibrillarin-like PRE-rR 96.8 0.0042 1.4E-07 53.8 8.6 40 93-156 124-163 (210)
143 1xdz_A Methyltransferase GIDB; 96.7 0.0065 2.2E-07 53.1 9.5 98 3-153 73-173 (240)
144 3njr_A Precorrin-6Y methylase; 96.7 0.014 4.7E-07 50.1 10.9 20 136-155 136-155 (204)
145 3mb5_A SAM-dependent methyltra 96.7 0.0054 1.9E-07 53.7 8.4 100 3-155 96-195 (255)
146 1jg1_A PIMT;, protein-L-isoasp 96.7 0.0026 9E-08 55.4 6.2 47 82-157 145-192 (235)
147 3m33_A Uncharacterized protein 96.6 0.0028 9.4E-08 55.0 6.1 77 91-206 106-183 (226)
148 3u81_A Catechol O-methyltransf 96.6 0.004 1.4E-07 53.7 7.0 38 94-154 133-170 (221)
149 2b25_A Hypothetical protein; s 96.6 0.0024 8.4E-08 58.9 5.8 103 82-221 172-282 (336)
150 2ozv_A Hypothetical protein AT 96.6 0.0094 3.2E-07 53.2 9.5 61 90-155 110-171 (260)
151 4hc4_A Protein arginine N-meth 96.6 0.006 2E-07 58.2 8.5 40 93-151 147-186 (376)
152 1ws6_A Methyltransferase; stru 96.5 0.0098 3.4E-07 48.2 8.7 43 94-158 109-151 (171)
153 3ntv_A MW1564 protein; rossman 96.5 0.0058 2E-07 53.3 7.7 99 2-152 73-174 (232)
154 1o9g_A RRNA methyltransferase; 96.5 0.0099 3.4E-07 52.2 9.2 48 92-152 165-212 (250)
155 2b3t_A Protein methyltransfera 96.5 0.011 3.8E-07 52.8 9.6 118 2-154 111-238 (276)
156 2ift_A Putative methylase HI07 96.5 0.0067 2.3E-07 51.8 7.7 44 92-158 121-167 (201)
157 3fpf_A Mtnas, putative unchara 96.5 0.013 4.3E-07 54.3 10.0 39 91-154 184-222 (298)
158 3orh_A Guanidinoacetate N-meth 96.5 0.0022 7.7E-08 56.4 4.6 46 90-152 123-168 (236)
159 1dl5_A Protein-L-isoaspartate 96.5 0.0042 1.5E-07 57.0 6.6 101 3-157 78-178 (317)
160 4dzr_A Protein-(glutamine-N5) 96.5 0.00076 2.6E-08 56.9 1.3 123 2-154 32-164 (215)
161 2h00_A Methyltransferase 10 do 96.4 0.0076 2.6E-07 52.9 7.9 98 94-218 139-236 (254)
162 2pbf_A Protein-L-isoaspartate 96.4 0.0035 1.2E-07 54.0 5.1 107 2-156 82-195 (227)
163 3dr5_A Putative O-methyltransf 96.3 0.0077 2.6E-07 52.6 7.2 101 3-152 59-161 (221)
164 2yxd_A Probable cobalt-precorr 96.3 0.023 8E-07 46.2 9.8 72 3-104 38-109 (183)
165 2oxt_A Nucleoside-2'-O-methylt 96.3 0.0028 9.4E-08 57.4 4.4 50 91-156 136-187 (265)
166 3bzb_A Uncharacterized protein 96.3 0.0069 2.4E-07 54.7 6.7 116 3-158 82-209 (281)
167 2y1w_A Histone-arginine methyl 96.2 0.01 3.5E-07 55.4 7.8 103 2-154 52-155 (348)
168 2hnk_A SAM-dependent O-methylt 96.2 0.02 7E-07 49.8 9.3 42 88-154 138-181 (239)
169 1p91_A Ribosomal RNA large sub 96.2 0.0054 1.9E-07 54.2 5.6 39 91-158 144-182 (269)
170 3gdh_A Trimethylguanosine synt 96.2 0.00055 1.9E-08 59.7 -1.1 80 2-110 80-159 (241)
171 1o54_A SAM-dependent O-methylt 96.2 0.0089 3E-07 53.4 6.8 100 3-155 115-214 (277)
172 2fpo_A Methylase YHHF; structu 96.2 0.011 3.8E-07 50.5 7.2 17 3-19 57-73 (202)
173 1r18_A Protein-L-isoaspartate( 96.2 0.0056 1.9E-07 52.9 5.3 107 2-156 86-196 (227)
174 1i9g_A Hypothetical protein RV 96.1 0.013 4.4E-07 52.0 7.7 129 3-189 102-231 (280)
175 1g8a_A Fibrillarin-like PRE-rR 96.1 0.1 3.5E-06 44.6 13.3 20 135-154 159-178 (227)
176 2pwy_A TRNA (adenine-N(1)-)-me 96.1 0.018 6.1E-07 50.2 8.4 101 3-155 99-199 (258)
177 3adn_A Spermidine synthase; am 96.1 0.023 8E-07 52.0 9.3 133 2-178 85-218 (294)
178 2wa2_A Non-structural protein 96.1 0.0034 1.2E-07 57.2 3.6 50 91-156 144-195 (276)
179 3bwc_A Spermidine synthase; SA 96.1 0.013 4.3E-07 53.8 7.5 43 92-154 166-210 (304)
180 2ipx_A RRNA 2'-O-methyltransfe 96.1 0.018 6.3E-07 49.8 8.2 99 3-156 80-184 (233)
181 3gjy_A Spermidine synthase; AP 96.0 0.025 8.7E-07 52.7 9.2 49 91-157 155-203 (317)
182 2gpy_A O-methyltransferase; st 96.0 0.023 7.8E-07 49.1 8.4 36 93-153 124-159 (233)
183 3fzg_A 16S rRNA methylase; met 96.0 0.0036 1.2E-07 54.7 3.2 102 2-155 51-152 (200)
184 3dou_A Ribosomal RNA large sub 96.0 0.014 4.9E-07 49.7 6.9 51 94-155 90-140 (191)
185 3tfw_A Putative O-methyltransf 96.0 0.029 9.9E-07 49.4 9.1 105 2-154 65-170 (248)
186 2fhp_A Methylase, putative; al 96.0 0.01 3.5E-07 48.9 5.8 45 93-158 114-158 (187)
187 3g89_A Ribosomal RNA small sub 95.9 0.022 7.6E-07 50.6 8.3 99 3-154 83-184 (249)
188 3duw_A OMT, O-methyltransferas 95.9 0.014 4.9E-07 49.9 6.7 18 2-19 60-77 (223)
189 1i1n_A Protein-L-isoaspartate 95.9 0.014 4.9E-07 50.0 6.7 44 85-156 141-184 (226)
190 1yb2_A Hypothetical protein TA 95.9 0.013 4.4E-07 52.4 6.6 98 3-154 113-211 (275)
191 2p41_A Type II methyltransfera 95.8 0.011 3.9E-07 54.4 6.0 45 92-155 145-192 (305)
192 2esr_A Methyltransferase; stru 95.8 0.0085 2.9E-07 49.4 4.6 17 3-19 34-50 (177)
193 1uir_A Polyamine aminopropyltr 95.8 0.0088 3E-07 55.2 5.0 49 92-156 148-197 (314)
194 2igt_A SAM dependent methyltra 95.6 0.09 3.1E-06 48.9 11.3 28 130-157 248-275 (332)
195 3tr6_A O-methyltransferase; ce 95.6 0.025 8.7E-07 48.3 6.9 22 133-154 153-174 (225)
196 2yvl_A TRMI protein, hypotheti 95.5 0.067 2.3E-06 46.2 9.4 98 3-155 94-191 (248)
197 3sso_A Methyltransferase; macr 95.4 0.019 6.6E-07 55.4 6.2 94 2-154 218-324 (419)
198 1sqg_A SUN protein, FMU protei 95.4 0.028 9.5E-07 53.9 7.3 120 3-155 249-375 (429)
199 2frn_A Hypothetical protein PH 95.3 0.12 3.9E-06 46.5 10.8 101 3-157 128-228 (278)
200 2xyq_A Putative 2'-O-methyl tr 95.3 0.084 2.9E-06 48.4 9.9 50 94-155 122-172 (290)
201 3htx_A HEN1; HEN1, small RNA m 95.3 0.073 2.5E-06 55.9 10.3 111 3-157 724-837 (950)
202 3ajd_A Putative methyltransfer 95.2 0.045 1.5E-06 49.1 7.4 27 130-156 187-213 (274)
203 1ixk_A Methyltransferase; open 95.1 0.052 1.8E-06 49.9 7.9 122 3-155 121-247 (315)
204 2vdv_E TRNA (guanine-N(7)-)-me 95.1 0.087 3E-06 46.0 9.0 55 86-154 119-173 (246)
205 3b3j_A Histone-arginine methyl 95.1 0.046 1.6E-06 53.5 7.8 104 2-154 160-263 (480)
206 1inl_A Spermidine synthase; be 95.0 0.058 2E-06 49.2 7.6 66 92-178 160-225 (296)
207 3c3y_A Pfomt, O-methyltransfer 95.0 0.096 3.3E-06 45.8 8.8 18 3-20 73-90 (237)
208 3tma_A Methyltransferase; thum 94.9 0.14 4.7E-06 47.5 10.1 113 3-155 206-318 (354)
209 1mjf_A Spermidine synthase; sp 94.9 0.03 1E-06 50.6 5.4 45 93-155 150-194 (281)
210 2bm8_A Cephalosporin hydroxyla 94.6 0.14 4.8E-06 44.8 8.9 18 3-20 84-101 (236)
211 2b2c_A Spermidine synthase; be 94.5 0.031 1.1E-06 51.7 4.7 45 92-154 178-222 (314)
212 1sui_A Caffeoyl-COA O-methyltr 94.5 0.071 2.4E-06 47.1 6.8 18 3-20 82-99 (247)
213 2yxl_A PH0851 protein, 450AA l 94.5 0.15 5.2E-06 49.1 9.6 122 3-155 262-390 (450)
214 1wxx_A TT1595, hypothetical pr 94.3 0.61 2.1E-05 43.7 13.3 28 128-155 299-326 (382)
215 3kr9_A SAM-dependent methyltra 94.2 0.32 1.1E-05 42.9 10.4 22 133-154 98-119 (225)
216 3c3p_A Methyltransferase; NP_9 94.1 0.077 2.6E-06 44.9 6.0 21 133-153 139-159 (210)
217 1iy9_A Spermidine synthase; ro 94.1 0.069 2.4E-06 48.1 5.9 64 93-178 146-209 (275)
218 2o07_A Spermidine synthase; st 94.1 0.047 1.6E-06 50.1 4.8 46 92-155 165-210 (304)
219 2pt6_A Spermidine synthase; tr 94.0 0.07 2.4E-06 49.3 6.0 63 92-178 186-250 (321)
220 1xj5_A Spermidine synthase 1; 94.0 0.061 2.1E-06 50.2 5.6 46 91-154 190-235 (334)
221 2avd_A Catechol-O-methyltransf 94.0 0.083 2.9E-06 45.1 6.0 18 2-19 71-88 (229)
222 3a27_A TYW2, uncharacterized p 93.8 0.31 1.1E-05 43.5 9.7 26 134-159 199-224 (272)
223 1nv8_A HEMK protein; class I a 93.8 0.12 4.2E-06 46.7 7.0 20 135-154 229-249 (284)
224 2frx_A Hypothetical protein YE 93.7 0.15 5.2E-06 49.9 7.9 122 3-155 120-247 (479)
225 3r3h_A O-methyltransferase, SA 93.6 0.04 1.4E-06 48.6 3.4 102 3-154 63-170 (242)
226 2b78_A Hypothetical protein SM 93.6 0.68 2.3E-05 43.6 12.2 27 129-155 306-332 (385)
227 2i7c_A Spermidine synthase; tr 93.5 0.06 2.1E-06 48.7 4.4 42 93-154 149-192 (283)
228 3lec_A NADB-rossmann superfami 93.3 0.6 2.1E-05 41.3 10.5 22 133-154 104-125 (230)
229 3cbg_A O-methyltransferase; cy 93.1 0.14 4.8E-06 44.4 6.1 22 133-154 161-182 (232)
230 3m6w_A RRNA methylase; rRNA me 92.8 0.16 5.6E-06 49.6 6.5 121 3-155 104-230 (464)
231 3gnl_A Uncharacterized protein 92.0 0.76 2.6E-05 41.1 9.4 22 133-154 104-125 (244)
232 2as0_A Hypothetical protein PH 91.9 1.5 5.2E-05 41.0 11.9 27 129-155 310-336 (396)
233 3v97_A Ribosomal RNA large sub 91.6 0.76 2.6E-05 47.0 10.2 29 128-156 631-659 (703)
234 3frh_A 16S rRNA methylase; met 91.5 0.49 1.7E-05 42.6 7.6 20 92-111 165-184 (253)
235 2ih2_A Modification methylase 91.5 0.58 2E-05 43.8 8.5 64 91-156 94-166 (421)
236 3lcv_B Sisomicin-gentamicin re 91.5 0.29 9.9E-06 44.8 6.1 67 92-180 195-264 (281)
237 2f8l_A Hypothetical protein LM 91.1 0.26 8.7E-06 45.5 5.5 122 2-156 132-258 (344)
238 4dmg_A Putative uncharacterize 91.0 1.2 4E-05 42.3 10.1 27 128-154 300-326 (393)
239 3m4x_A NOL1/NOP2/SUN family pr 90.4 0.32 1.1E-05 47.3 5.7 26 130-155 210-235 (456)
240 2cmg_A Spermidine synthase; tr 87.5 0.25 8.5E-06 44.3 2.4 19 136-154 153-171 (262)
241 2okc_A Type I restriction enzy 85.4 3.1 0.00011 39.7 9.1 22 134-155 287-308 (445)
242 3lkd_A Type I restriction-modi 85.2 3.9 0.00013 40.5 9.9 130 2-156 223-360 (542)
243 2qm3_A Predicted methyltransfe 84.4 6.6 0.00023 36.4 10.7 101 3-155 175-279 (373)
244 3tqs_A Ribosomal RNA small sub 83.8 1.4 4.6E-05 39.3 5.4 50 3-56 32-93 (255)
245 2yx1_A Hypothetical protein MJ 83.4 2.7 9.1E-05 38.6 7.4 24 135-158 272-295 (336)
246 3khk_A Type I restriction-modi 77.8 3.3 0.00011 41.0 6.3 137 3-155 247-396 (544)
247 3eld_A Methyltransferase; flav 76.8 10 0.00035 34.9 8.8 48 91-155 143-192 (300)
248 3uzu_A Ribosomal RNA small sub 72.8 4.2 0.00015 36.6 5.1 48 3-56 45-108 (279)
249 1jyo_E Protein tyrosine phosph 71.4 1.2 4E-05 34.7 0.9 44 99-143 10-56 (105)
250 3ldg_A Putative uncharacterize 71.1 13 0.00045 34.9 8.3 18 3-20 197-214 (384)
251 3k0b_A Predicted N6-adenine-sp 69.2 8.9 0.0003 36.2 6.7 18 3-20 204-221 (393)
252 3fut_A Dimethyladenosine trans 69.2 2.9 9.8E-05 37.6 3.1 45 3-52 49-105 (271)
253 1wy7_A Hypothetical protein PH 67.5 2.1 7.3E-05 35.4 1.8 25 83-110 103-127 (207)
254 1ne2_A Hypothetical protein TA 67.1 2.2 7.5E-05 35.3 1.8 17 94-110 109-125 (200)
255 1yub_A Ermam, rRNA methyltrans 66.7 3.2 0.00011 35.9 2.9 18 3-20 32-49 (245)
256 1zq9_A Probable dimethyladenos 65.6 8.5 0.00029 34.3 5.5 18 3-20 31-48 (285)
257 1qam_A ERMC' methyltransferase 63.8 2.8 9.7E-05 36.5 1.9 18 3-20 33-50 (244)
258 1qyr_A KSGA, high level kasuga 63.1 5.1 0.00018 35.4 3.5 48 3-56 24-85 (252)
259 2h1r_A Dimethyladenosine trans 61.0 9.3 0.00032 34.3 4.9 17 3-19 45-61 (299)
260 3gru_A Dimethyladenosine trans 59.7 8.7 0.0003 34.9 4.5 18 3-20 53-70 (295)
261 2g72_A Phenylethanolamine N-me 56.1 4 0.00014 35.9 1.5 15 2-16 73-87 (289)
262 3ftd_A Dimethyladenosine trans 55.9 2.8 9.4E-05 37.0 0.4 19 3-21 34-52 (249)
263 3s1s_A Restriction endonucleas 55.1 48 0.0016 34.7 9.5 23 133-155 444-466 (878)
264 3k6r_A Putative transferase PH 50.3 8.4 0.00029 34.7 2.7 17 3-19 128-144 (278)
265 4azs_A Methyltransferase WBDD; 49.7 6.3 0.00022 38.9 1.9 19 2-20 68-86 (569)
266 3evf_A RNA-directed RNA polyme 48.1 6.7 0.00023 35.7 1.6 49 90-155 135-185 (277)
267 2qy6_A UPF0209 protein YFCK; s 47.7 8 0.00027 34.3 2.1 22 2-23 62-83 (257)
268 3ll7_A Putative methyltransfer 46.5 14 0.00049 35.2 3.8 44 3-48 96-153 (410)
269 3gcz_A Polyprotein; flavivirus 45.3 7.8 0.00027 35.3 1.6 49 90-155 151-202 (282)
270 2zig_A TTHA0409, putative modi 45.0 40 0.0014 30.0 6.4 61 90-155 35-98 (297)
271 2r6z_A UPF0341 protein in RSP 44.9 6.6 0.00023 34.7 1.1 18 3-20 86-103 (258)
272 3p8z_A Mtase, non-structural p 42.1 9.5 0.00032 34.3 1.6 17 2-18 80-96 (267)
273 1m6y_A S-adenosyl-methyltransf 41.3 9.8 0.00033 34.6 1.6 19 3-21 29-47 (301)
274 1uwv_A 23S rRNA (uracil-5-)-me 40.7 12 0.00041 35.4 2.3 18 3-20 289-306 (433)
275 1boo_A Protein (N-4 cytosine-s 39.7 42 0.0015 30.3 5.7 53 90-156 28-86 (323)
276 3lkz_A Non-structural protein 39.6 9 0.00031 35.4 1.1 35 2-51 96-130 (321)
277 2b9e_A NOL1/NOP2/SUN domain fa 38.4 40 0.0014 30.4 5.3 19 3-21 105-123 (309)
278 3c0k_A UPF0064 protein YCCW; P 38.1 14 0.00047 34.4 2.2 24 131-154 316-339 (396)
279 2k4m_A TR8_protein, UPF0146 pr 36.6 16 0.00056 30.2 2.1 17 3-19 38-55 (153)
280 2jjq_A Uncharacterized RNA met 35.5 14 0.00048 35.2 1.8 17 3-19 293-309 (425)
281 3tm4_A TRNA (guanine N2-)-meth 34.1 12 0.00042 34.6 1.1 24 84-107 275-298 (373)
282 2px2_A Genome polyprotein [con 30.6 14 0.00046 33.5 0.7 19 2-20 75-93 (269)
283 2v1n_A KIN17, protein KIN homo 30.5 30 0.001 27.1 2.6 26 117-142 11-36 (111)
284 1nvp_D Transcription initiatio 30.4 39 0.0013 26.3 3.2 24 166-189 12-35 (108)
285 3ldu_A Putative methylase; str 30.0 40 0.0014 31.4 4.0 19 3-21 198-216 (385)
286 3bt7_A TRNA (uracil-5-)-methyl 28.7 19 0.00066 33.2 1.4 17 3-19 216-232 (369)
287 3evf_A RNA-directed RNA polyme 28.3 75 0.0026 28.7 5.2 19 2-20 76-94 (277)
288 1q1h_A TFE, transcription fact 27.4 29 0.00098 25.8 2.0 42 166-208 48-93 (110)
289 1nh2_D Transcription initiatio 26.4 49 0.0017 26.2 3.2 24 166-189 16-39 (121)
290 1d0q_A DNA primase; zinc-bindi 26.2 47 0.0016 25.0 3.1 31 4-34 59-94 (103)
291 3qua_A Putative uncharacterize 25.8 43 0.0015 28.7 3.0 39 166-208 160-198 (199)
292 3ua3_A Protein arginine N-meth 25.2 37 0.0013 35.0 2.8 21 2-22 411-431 (745)
293 3vyw_A MNMC2; tRNA wobble urid 25.0 34 0.0012 31.3 2.4 23 1-23 97-119 (308)
294 2lmc_A Bacterial RNA polymeras 24.9 55 0.0019 24.0 2.9 31 187-219 45-79 (84)
295 2oyr_A UPF0341 protein YHIQ; a 24.1 24 0.00081 31.3 1.1 19 2-20 90-108 (258)
296 2dul_A N(2),N(2)-dimethylguano 23.7 30 0.001 32.3 1.8 19 2-20 49-67 (378)
297 2zig_A TTHA0409, putative modi 22.5 30 0.001 30.7 1.5 17 3-19 238-254 (297)
298 3ol0_A De novo designed monome 22.3 43 0.0015 22.2 1.8 25 75-99 6-30 (48)
299 4auk_A Ribosomal RNA large sub 21.1 37 0.0013 32.1 1.8 70 2-107 213-282 (375)
300 1t35_A Hypothetical protein YV 20.9 86 0.0029 26.3 4.0 39 166-208 140-178 (191)
301 1sse_A AP-1 like transcription 20.9 36 0.0012 21.0 1.1 9 45-53 4-12 (35)
302 2a33_A Hypothetical protein; s 20.2 91 0.0031 26.8 4.0 39 166-208 152-190 (215)
No 1
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=100.00 E-value=6.3e-86 Score=636.69 Aligned_cols=297 Identities=43% Similarity=0.771 Sum_probs=264.5
Q ss_pred CeEEEeeCCCCCcccHHHHHHHHHHHHHHHHh--cCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCcee
Q 045960 1 CIRFADLGCSSGPNALLPTWEAIDSLDKICHR--LNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCF 78 (300)
Q Consensus 1 ~~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~--~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f 78 (300)
+++|||||||+|+||+.+++.||++|+++|.+ .++++|+|||||||||+||||+||++||.+++++.++.+.++++||
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g~~~~~~f 132 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENGRKIGSCL 132 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTCCCTTSEE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhccCCCCceE
Confidence 48999999999999999999999999999865 4556789999999999999999999999999988777777778999
Q ss_pred eeecCCccccccCCCCcccEEEeccccccccCCCCCCC-------C----------CHHHHHHHHHhHHHHHHHHHHHHH
Q 045960 79 VAASPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQG-------N----------ESDVHKAFLNQFESDFSTFLKFRS 141 (300)
Q Consensus 79 ~~~vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~-------n----------~~~v~~ay~~q~~~D~~~fL~~Ra 141 (300)
++|||||||+||||++|+|+|||++||||||++|+.+. | |++|.++|++||++||.+||++|+
T Consensus 133 ~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~~~s~~~nkg~i~i~~~sp~~v~~ay~~Qf~~D~~~FL~~Ra 212 (384)
T 2efj_A 133 IGAMPGSFYSRLFPEESMHFLHSCYCLHWLSQVPSGLVTELGISVNKGCIYSSKASRPPIQKAYLDQFTKDFTTFLRIHS 212 (384)
T ss_dssp EEECCSCTTSCCSCTTCEEEEEEESCTTBCSSSCCC------CCCCTTCSSSCTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEecchhhhhccCCCCceEEEEecceeeecCCCchhhhccccccccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999998765 2 788999999999999999999999
Q ss_pred HhhccCceeEEEEeecCCC--CCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 142 EELKSQGRMVLTLLYNDNF--HATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 142 ~EL~~GG~~vl~~~g~~~~--~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
+||||||+||++++|+++. ++.+++.+.++|++||.+|+|+++++|+| |+|+|+||++|++++|+++|+|+|+++|+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~l~~al~~lv~eGli~~ek~dsf-~~P~y~ps~~E~~~~le~~g~F~i~~le~ 291 (384)
T 2efj_A 213 EELISRGRMLLTFICKEDEFDHPNSMDLLEMSINDLVIEGHLEEEKLDSF-NVPIYAPSTEEVKRIVEEEGSFEILYLET 291 (384)
T ss_dssp HHEEEEEEEEEEEECCCTTTCCCCHHHHHHHHHHHHHHHTSSCHHHHHTC-CCSBCCCCHHHHHHHHHHHCSEEEEEEEE
T ss_pred HHhccCCeEEEEEecCCCcccCcccHHHHHHHHHHHHHhCCcchhhhccc-CCcccCCCHHHHHHHHHHcCCceEEEEEE
Confidence 9999999999999999997 66655689999999999999999999999 99999999999999999999999999999
Q ss_pred EeecccCCc---cCCC---CCCCC--cccchHHHHHHHHHHhhhhHHHhhhChhHHHHHHHHHHHHhhhhhhhcCCCCeE
Q 045960 220 FNVSWLVGF---VDGV---DNKGS--DKYARGKYVTKHVRAVGESFLANLFDDATVDEIHRRFATKVTDVVLDKGRGAYA 291 (300)
Q Consensus 220 ~~~~~~~~~---~~~~---~~~~~--d~~~~~~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~~~~~~~~~~~~~~~ 291 (300)
++.+|++ + ++.. .+... |....|+.+++++||++||+|.+|||++++|+||+||+++++++ ++.++.+++
T Consensus 292 ~~~~~~~-~~~~~~~~~~~~~~~~~~d~~~~g~~~a~~iRa~~epll~~hfG~~i~d~lF~ry~~~~~~~-~~~~~~~~~ 369 (384)
T 2efj_A 292 FNAPYDA-GFSIDDDYQGRSHSPVSCDEHARAAHVASVVRSIYEPILASHFGEAILPDLSHRIAKNAAKV-LRSGKGFYD 369 (384)
T ss_dssp EEEETTT-TCCC---------CCSHHHHHHHHHHHHHHHHHHHHHHHHHHHCSTTHHHHHHHHHHHHHHH-HHHTCCEEE
T ss_pred Eeecccc-cccccccccccccccccchHhHhHHHhhhhhHHhhhhhhHHhccHHHHHHHHHHHHHHHHHH-HhhCCCceE
Confidence 9999987 3 2210 00000 24578899999999999999999999999999999999999999 888999999
Q ss_pred EEEEEEeeC
Q 045960 292 SLLISLVKK 300 (300)
Q Consensus 292 ~~~~~l~r~ 300 (300)
+++++|+||
T Consensus 370 ~~~~~L~k~ 378 (384)
T 2efj_A 370 SVIISLAKK 378 (384)
T ss_dssp EEEEEEEEC
T ss_pred EEEEEEEEc
Confidence 999999997
No 2
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=100.00 E-value=4.7e-86 Score=632.88 Aligned_cols=288 Identities=38% Similarity=0.693 Sum_probs=264.4
Q ss_pred CeEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCC-CCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceee
Q 045960 1 CIRFADLGCSSGPNALLPTWEAIDSLDKICHRLNR-KPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFV 79 (300)
Q Consensus 1 ~~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~-~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~ 79 (300)
+++|||||||+|+||+.+++.||++|+++|.+.++ ++|+|||||||||+||||+||++|+.+. + .+ ++||+
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~----~---~~-~~~f~ 123 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIEN----D---VD-GVCFI 123 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSC----S---CT-TCEEE
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhc----c---cC-CCEEE
Confidence 48999999999999999999999999999987776 6889999999999999999999999874 1 11 57999
Q ss_pred eecCCccccccCCCCcccEEEeccccccccCCCCCCCC-----------CHHHHHHHHHhHHHHHHHHHHHHHHhhccCc
Q 045960 80 AASPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGN-----------ESDVHKAFLNQFESDFSTFLKFRSEELKSQG 148 (300)
Q Consensus 80 ~~vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n-----------~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG 148 (300)
+|||||||+||||++|+|+||||+||||||++|+.+.+ |++|.++|++||++||.+||++|++||||||
T Consensus 124 ~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls~~p~~l~~nkg~i~~~~~~p~~v~~ay~~Qf~~D~~~FL~~Ra~EL~pGG 203 (359)
T 1m6e_X 124 NGVPGSFYGRLFPRNTLHFIHSSYSLMWLSQVPIGIESNKGNIYMANTCPQSVLNAYYKQFQEDHALFLRCRAQEVVPGG 203 (359)
T ss_dssp EEEESCSSSCCSCTTCBSCEEEESCTTBCSSCCSCCCCCTTTTSSCSSSCCTTSCCSHHHHHHHHHHHHHHHHHHBCTTC
T ss_pred EecchhhhhccCCCCceEEEEehhhhhhcccCchhhhccCCceEecCCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCc
Confidence 99999999999999999999999999999999988762 7889999999999999999999999999999
Q ss_pred eeEEEEeecCCCCCCCc------hHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEee
Q 045960 149 RMVLTLLYNDNFHATPG------EPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNV 222 (300)
Q Consensus 149 ~~vl~~~g~~~~~~~~~------~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~ 222 (300)
+||++++|+++.+++++ +.|.++|++||.+|+|++|++|+| |+|+|+||++|++++|+++|+|+|+++|+++.
T Consensus 204 ~mvl~~~gr~~~~~~~~~~~~~~~~l~~al~~mv~eGli~~ek~d~f-~~P~y~ps~~E~~~~ie~~G~F~i~~~e~~~~ 282 (359)
T 1m6e_X 204 RMVLTILGRRSEDRASTECCLIWQLLAMALNQMVSEGLIEEEKMDKF-NIPQYTPSPTEVEAEILKEGSFLIDHIEASEI 282 (359)
T ss_dssp EEEEEEEECSSSSSSSTTTSTTTHHHHHHHHHHHHTTCSCCSTTGGG-CCCCBCCCSHHHHHHHHHTTTBCCEEEEEEEE
T ss_pred eEEEEEecCCCCCccccchHHHHHHHHHHHHHHHHccccchhhhhcc-CCCccCCCHHHHHHHHHHcCCceEEEEEEEee
Confidence 99999999999876543 799999999999999999999999 99999999999999999999999999999999
Q ss_pred cccCCccCCCCCCCCcccchHHHHHHHHHHhhhhHHHhhhChhHHHHHHHHHHHHhhhhhhhcCCCCeEEEEEEEeeC
Q 045960 223 SWLVGFVDGVDNKGSDKYARGKYVTKHVRAVGESFLANLFDDATVDEIHRRFATKVTDVVLDKGRGAYASLLISLVKK 300 (300)
Q Consensus 223 ~~~~~~~~~~~~~~~d~~~~~~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~l~r~ 300 (300)
.|++ ++++ .+...|....|+.+++++||++||+|.+|||++++|+||+||+++++++ ++.++.++++++++|+||
T Consensus 283 ~~~~-~~~~-~d~~~~~~~~g~~~a~~~Ra~~e~ll~~hfG~~i~d~lf~ry~~~~~~~-~~~~~~~~~~~~~~L~k~ 357 (359)
T 1m6e_X 283 YWSS-CTKD-GDGGGSVEEEGYNVARCMRAVAEPLLLDHFGEAIIEDVFHRYKLLIIER-MSKEKTKFINVIVSLIRK 357 (359)
T ss_dssp ETTC-CSSC-TTCCSSTTTTTTHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH-HHSSCCEEEEEEEEEEBC
T ss_pred ccCc-ccch-hhhhhhhhHhHhHhhhhhhhhcchhhHHhccHHHHHHHHHHHHHHHHHH-HhhCCCceEEEEEEEEeC
Confidence 9988 3332 1111234678899999999999999999999999999999999999999 888999999999999997
No 3
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=100.00 E-value=3.5e-81 Score=602.43 Aligned_cols=291 Identities=28% Similarity=0.475 Sum_probs=259.6
Q ss_pred CeEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhh---hcCCCCCce
Q 045960 1 CIRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRT---EKGHEFGSC 77 (300)
Q Consensus 1 ~~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~---~~~~~~~~~ 77 (300)
+++|||||||+|+||+.+++.||++|+++|.+.+.++|+|||||||||+||||+||++|+.+++++.. ..+...++|
T Consensus 53 ~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~~~~~~~~~~~~~~~~~~~~~ 132 (374)
T 3b5i_A 53 PFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLPPLVSNTCMEECLAADGNRSY 132 (374)
T ss_dssp CEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSCCBCCCC--CCC---CCCBCS
T ss_pred ceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhhhhhhhcchhhhccccCCCce
Confidence 48999999999999999999999999999988887889999999999999999999999998654321 112233689
Q ss_pred eeeecCCccccccCCCCcccEEEeccccccccCCCCCCC-------C---------CHHHHHHHHHhHHHHHHHHHHHHH
Q 045960 78 FVAASPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQG-------N---------ESDVHKAFLNQFESDFSTFLKFRS 141 (300)
Q Consensus 78 f~~~vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~-------n---------~~~v~~ay~~q~~~D~~~fL~~Ra 141 (300)
|++|||||||+||||++|+|+|||++||||||++|+.+. | +|.|.+||++||++||..||++|+
T Consensus 133 f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls~~p~~l~~~~~~~~nkg~i~~~~~~~~v~~ay~~Qf~~D~~~fL~~ra 212 (374)
T 3b5i_A 133 FVAGVPGSFYRRLFPARTIDFFHSAFSLHWLSQVPESVTDRRSAAYNRGRVFIHGAGEKTTTAYKRQFQADLAEFLRARA 212 (374)
T ss_dssp EEEEEESCTTSCCSCTTCEEEEEEESCTTBCSSCCGGGGCTTSTTCCTTTSSSSSCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred EEEecChhhhcccCCCcceEEEEecceeeeeccCchhhhccccccccCCceEeCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999997663 2 445999999999999999999999
Q ss_pred HhhccCceeEEEEeecCCCCCCCc--------hHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCee
Q 045960 142 EELKSQGRMVLTLLYNDNFHATPG--------EPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFD 213 (300)
Q Consensus 142 ~EL~~GG~~vl~~~g~~~~~~~~~--------~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~ 213 (300)
+||||||+||++++|+++.+++++ +.|.++|++|+.||+|+++++|+| ++|+|+||++|++.+|+++|+|+
T Consensus 213 ~eL~pGG~mvl~~~gr~~~~~~~~~~~~~~~~~~l~~al~~l~~eG~i~~e~~d~f-~~P~y~ps~~E~~~~l~~~~~F~ 291 (374)
T 3b5i_A 213 AEVKRGGAMFLVCLGRTSVDPTDQGGAGLLFGTHFQDAWDDLVREGLVAAEKRDGF-NIPVYAPSLQDFKEVVDANGSFA 291 (374)
T ss_dssp HHEEEEEEEEEEEEECCCSSTTCCHHHHHHHSSHHHHHHHHTTSSSSSCHHHHSSC-CCCBCCCCHHHHHHHHHHHCSEE
T ss_pred HHhCCCCEEEEEEecCCCCccccccchhhHHHHHHHHHHHHHHHhCCcchhhcccC-CccccCCCHHHHHHHHHhcCCcE
Confidence 999999999999999998876653 469999999999999999999999 99999999999999999888999
Q ss_pred EEEEEEEeecccCCccCCCCCCCCcccchHHHHHHHHHHhhhhHHHhhhChhHHHHHHHHHHHHhhhhhhh--cCCCC--
Q 045960 214 IQEVETFNVSWLVGFVDGVDNKGSDKYARGKYVTKHVRAVGESFLANLFDDATVDEIHRRFATKVTDVVLD--KGRGA-- 289 (300)
Q Consensus 214 I~~~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~~~~~~~~--~~~~~-- 289 (300)
|+++|+++.+|+.. .+.. .+....|+.+++++||++||+|.+|||++++|+||+||+++++++ ++ +++.+
T Consensus 292 I~~le~~~~~~~~~-~~~~----~~~~~~g~~~a~~~Ra~~e~ll~~hfg~~i~d~lf~ry~~~~~~~-~~~~~~~~~~~ 365 (374)
T 3b5i_A 292 IDKLVVYKGGSPLV-VNEP----DDASEVGRAFASSCRSVAGVLVEAHIGEELSNKLFSRVESRATSH-AKDVLVNLQFF 365 (374)
T ss_dssp EEEEEEEECCCCCC-CSST----TCHHHHHHHHHHHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHT-CHHHHTTCCCE
T ss_pred EEEEEEEeecCCcc-cccc----chhHHHHHHHHHHHHHhccchhHhhccHHHHHHHHHHHHHHHHHh-HHHhhhccccc
Confidence 99999999999873 2221 145678999999999999999999999999999999999999999 66 66667
Q ss_pred eEEEEEEEe
Q 045960 290 YASLLISLV 298 (300)
Q Consensus 290 ~~~~~~~l~ 298 (300)
+++++++|+
T Consensus 366 ~~~~~~~l~ 374 (374)
T 3b5i_A 366 HIVASLSFT 374 (374)
T ss_dssp EEEEEEEEC
T ss_pred eEEEEEEeC
Confidence 899999885
No 4
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.38 E-value=4.9e-11 Score=107.95 Aligned_cols=143 Identities=22% Similarity=0.315 Sum_probs=103.0
Q ss_pred CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHH
Q 045960 92 PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMV 171 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~a 171 (300)
+++++|+|+|+.++||+.. ...+|+.-++-|+|||++++...+.++. ..+...
T Consensus 114 ~~~~fD~v~~~~~l~~~~d----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~-----~~~~~~ 166 (279)
T 3ccf_A 114 VDKPLDAVFSNAMLHWVKE----------------------PEAAIASIHQALKSGGRFVAEFGGKGNI-----KYILEA 166 (279)
T ss_dssp CSSCEEEEEEESCGGGCSC----------------------HHHHHHHHHHHEEEEEEEEEEEECTTTT-----HHHHHH
T ss_pred cCCCcCEEEEcchhhhCcC----------------------HHHHHHHHHHhcCCCcEEEEEecCCcch-----HHHHHH
Confidence 3579999999999999654 4567788889999999999998765432 223344
Q ss_pred HHHHHHc-CCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeecccCCccCCCCCCCCcccchHHHHHHHH
Q 045960 172 LKDMISE-GLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVSWLVGFVDGVDNKGSDKYARGKYVTKHV 250 (300)
Q Consensus 172 l~~mv~e-G~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~~~~~~~~~~~~~~~d~~~~~~~~a~~i 250 (300)
+.+...+ |.- .... ..|+++++.++++.++++.| |++.+++.+..++.. . ...+.+..|+
T Consensus 167 ~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~--~-----------~~~~~~~~~l 227 (279)
T 3ccf_A 167 LYNALETLGIH----NPQA-LNPWYFPSIGEYVNILEKQG-FDVTYAALFNRPTTL--A-----------EGEFGMANWI 227 (279)
T ss_dssp HHHHHHHHTCC----CGGG-GCCCCCCCHHHHHHHHHHHT-EEEEEEEEEECCEEC--S-----------SGGGHHHHHH
T ss_pred HHHHHHhcCCc----cccC-cCceeCCCHHHHHHHHHHcC-CEEEEEEEecccccc--c-----------CCHHHHHHHH
Confidence 4433322 321 2345 56788999999999999999 999988887655322 0 0134677888
Q ss_pred HHhhhhHHHhhhChhHHHHHHHHHHHHhhhh
Q 045960 251 RAVGESFLANLFDDATVDEIHRRFATKVTDV 281 (300)
Q Consensus 251 RA~~ep~l~~hfge~i~delf~r~~~~~~~~ 281 (300)
+++..+++.. ++++..+++.+++.+.+.+.
T Consensus 228 ~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 257 (279)
T 3ccf_A 228 QMFASAFLVG-LTPDQQVQLIRKVEATLQDK 257 (279)
T ss_dssp HHHCHHHHTT-CCHHHHHHHHHHHHHHHHHH
T ss_pred HHhhHHHhcc-CCHHHHHHHHHHHHHHHHhh
Confidence 8877666654 77788888888888887765
No 5
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.34 E-value=7.3e-11 Score=104.70 Aligned_cols=200 Identities=15% Similarity=0.170 Sum_probs=123.0
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..+..+.... |..+|+..|+-.+-- +.. ++... +--| +
T Consensus 36 ~vLdiG~G~G~~~~~l~~~~---------------~~~~v~~~D~s~~~~-----------~~a-~~~~~--~~~~---~ 83 (259)
T 2p35_A 36 NGYDLGCGPGNSTELLTDRY---------------GVNVITGIDSDDDML-----------EKA-ADRLP--NTNF---G 83 (259)
T ss_dssp SEEEETCTTTHHHHHHHHHH---------------CTTSEEEEESCHHHH-----------HHH-HHHST--TSEE---E
T ss_pred EEEEecCcCCHHHHHHHHhC---------------CCCEEEEEECCHHHH-----------HHH-HHhCC--CcEE---E
Confidence 69999999999887554321 124566666422100 000 11110 1122 2
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
.+.+.. +-|++++|+|+|+.++||+.. ...+|+.-.+-|+|||++++...+...
T Consensus 84 ~~d~~~-~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~--- 137 (259)
T 2p35_A 84 KADLAT-WKPAQKADLLYANAVFQWVPD----------------------HLAVLSQLMDQLESGGVLAVQMPDNLQ--- 137 (259)
T ss_dssp ECCTTT-CCCSSCEEEEEEESCGGGSTT----------------------HHHHHHHHGGGEEEEEEEEEEEECCTT---
T ss_pred ECChhh-cCccCCcCEEEEeCchhhCCC----------------------HHHHHHHHHHhcCCCeEEEEEeCCCCC---
Confidence 234433 227889999999999999643 567888889999999999999865432
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeecccCCccCCCCCCCCcccch
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVSWLVGFVDGVDNKGSDKYAR 242 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~~~~~~~~~~~~~~~d~~~~ 242 (300)
......+.++...+.+........ ..+..+++.+++++++++.| |+++..+..... . ...
T Consensus 138 ---~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~-~--------------~~~ 197 (259)
T 2p35_A 138 ---EPTHIAMHETADGGPWKDAFSGGG-LRRKPLPPPSDYFNALSPKS-SRVDVWHTVYNH-P--------------MKD 197 (259)
T ss_dssp ---SHHHHHHHHHHHHSTTGGGC--------CCCCCHHHHHHHHGGGE-EEEEEEEEEEEE-E--------------ESC
T ss_pred ---cHHHHHHHHHhcCcchHHHhcccc-ccccCCCCHHHHHHHHHhcC-CceEEEEEEeee-c--------------cCC
Confidence 223445566555443332211112 23567789999999999999 887655433111 0 112
Q ss_pred HHHHHHHHHHhh-hhHHHhhhChhHHHHHHHHHHHHhhhh
Q 045960 243 GKYVTKHVRAVG-ESFLANLFDDATVDEIHRRFATKVTDV 281 (300)
Q Consensus 243 ~~~~a~~iRA~~-ep~l~~hfge~i~delf~r~~~~~~~~ 281 (300)
...+..|+++.. .+++. .++++..+++.+++.+.+.+.
T Consensus 198 ~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~ 236 (259)
T 2p35_A 198 ADSIVEWVKGTGLRPYLA-AAGEENREAFLADYTRRIAAA 236 (259)
T ss_dssp HHHHHHHHTTTTTTHHHH-TTCGGGHHHHHHHHHHHHHHH
T ss_pred chHHhhhhhcCcchHHHH-hCCHHHHHHHHHHHHHHHHHh
Confidence 557778888764 34443 588888888888888888765
No 6
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.22 E-value=5.3e-10 Score=99.17 Aligned_cols=218 Identities=13% Similarity=0.121 Sum_probs=129.5
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+... ..+|+..|.-.+-- ...+ ... . + ...++ ..
T Consensus 41 ~~vLDiG~G~G~~~~~l~~~-----------------~~~v~~vD~s~~~~-~~a~------~~~-~--~-~~~~~--~~ 90 (263)
T 2yqz_A 41 PVFLELGVGTGRIALPLIAR-----------------GYRYIALDADAAML-EVFR------QKI-A--G-VDRKV--QV 90 (263)
T ss_dssp CEEEEETCTTSTTHHHHHTT-----------------TCEEEEEESCHHHH-HHHH------HHT-T--T-SCTTE--EE
T ss_pred CEEEEeCCcCCHHHHHHHHC-----------------CCEEEEEECCHHHH-HHHH------HHh-h--c-cCCce--EE
Confidence 37999999999998765421 13566666421110 0100 000 0 0 01122 22
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.+++..--+|++++|+|+++.++||+.. ...+|+.-.+-|+|||++++.+...+ ..
T Consensus 91 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~-~~ 147 (263)
T 2yqz_A 91 VQADARAIPLPDESVHGVIVVHLWHLVPD----------------------WPKVLAEAIRVLKPGGALLEGWDQAE-AS 147 (263)
T ss_dssp EESCTTSCCSCTTCEEEEEEESCGGGCTT----------------------HHHHHHHHHHHEEEEEEEEEEEEEEC-CC
T ss_pred EEcccccCCCCCCCeeEEEECCchhhcCC----------------------HHHHHHHHHHHCCCCcEEEEEecCCC-cc
Confidence 33445443478899999999999999654 45677778889999999999954432 11
Q ss_pred CCCchHHHHHHHHHHHc-CCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeecccCCccCCCCCCCCccc
Q 045960 162 ATPGEPMLMVLKDMISE-GLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVSWLVGFVDGVDNKGSDKY 240 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~e-G~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~~~~~~~~~~~~~~~d~~ 240 (300)
. ...+...+.++... |. .. .-+.+.++.+++.+++++.| |++...+... |.. .
T Consensus 148 ~--~~~~~~~~~~~~~~~~~-------~~-~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~--~~~-------------~ 201 (263)
T 2yqz_A 148 P--EWTLQERWRAFAAEEGF-------PV-ERGLHAKRLKEVEEALRRLG-LKPRTREVAR--WRE-------------E 201 (263)
T ss_dssp H--HHHHHHHHHHHHHHHTC-------CC-CCCHHHHHHHHHHHHHHHTT-CCCEEEEEEE--EEE-------------E
T ss_pred H--HHHHHHHHHHHHHHhCC-------Cc-ccccccCCHHHHHHHHHHcC-CCcceEEEee--eec-------------C
Confidence 0 01133444443322 21 01 22456778999999999999 9987766553 322 1
Q ss_pred chHHHHHHHHHHhhhhHHHhhhChhHHHHHHHHHHHHhhhhhhhcCCC---CeEEEEEEEeeC
Q 045960 241 ARGKYVTKHVRAVGESFLANLFDDATVDEIHRRFATKVTDVVLDKGRG---AYASLLISLVKK 300 (300)
Q Consensus 241 ~~~~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~~~~~~~~~~~~---~~~~~~~~l~r~ 300 (300)
...+.+..++++.+.+.+ .+++++..+++.+++.+.+.+. ...... -+..+++...||
T Consensus 202 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~~-~~~~~~~~~~~~~~~~~~~rk 262 (263)
T 2yqz_A 202 RTPREALEALSERLYSFT-QGLPEPVHARVMERLWAWAEAE-LGDLDRPFPVEKRFLLRVSRL 262 (263)
T ss_dssp ECHHHHHHHHHTTCSGGG-SSSCHHHHHHHHHHHHHHHHHH-SSCTTSCEEEEEEEEEEEEEC
T ss_pred CCHHHHHHHHHHhhcccc-cCCCHHHHHHHHHHHHHHHHHh-cCCcCccccccceeEEEeeec
Confidence 124566777776655554 3477888888888888888776 332211 234555555554
No 7
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.09 E-value=1.6e-08 Score=90.50 Aligned_cols=142 Identities=10% Similarity=0.032 Sum_probs=90.5
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.+++..--+|++++|+|+|+.++||+.. ...+|+.-.+-|+|||++++......+..
T Consensus 116 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~ 173 (273)
T 3bus_A 116 SYADAMDLPFEDASFDAVWALESLHHMPD----------------------RGRALREMARVLRPGGTVAIADFVLLAPV 173 (273)
T ss_dssp EECCTTSCCSCTTCEEEEEEESCTTTSSC----------------------HHHHHHHHHTTEEEEEEEEEEEEEESSCC
T ss_pred EECccccCCCCCCCccEEEEechhhhCCC----------------------HHHHHHHHHHHcCCCeEEEEEEeeccCCC
Confidence 34555554478899999999999999644 35778888899999999999987765422
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeecccCCccCCCCCCCCcccc
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVSWLVGFVDGVDNKGSDKYA 241 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~~~~~~~~~~~~~~~d~~~ 241 (300)
. ......+..+. ..+ -..+.++.+++.+++++.| |++.+++.+...+..
T Consensus 174 ~---~~~~~~~~~~~----------~~~--~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~~~~--------------- 222 (273)
T 3bus_A 174 E---GAKKEAVDAFR----------AGG--GVLSLGGIDEYESDVRQAE-LVVTSTVDISAQARP--------------- 222 (273)
T ss_dssp C---HHHHHHHHHHH----------HHH--TCCCCCCHHHHHHHHHHTT-CEEEEEEECHHHHTT---------------
T ss_pred C---hhHHHHHHHHH----------hhc--CccCCCCHHHHHHHHHHcC-CeEEEEEECcHhHHH---------------
Confidence 1 22222222221 112 1235689999999999999 999888776433111
Q ss_pred hHHHHHHHHHHhhhhHHHhhhChhHHHHHHHHHHHH
Q 045960 242 RGKYVTKHVRAVGESFLANLFDDATVDEIHRRFATK 277 (300)
Q Consensus 242 ~~~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~ 277 (300)
.-..+...+++.... +...+|++..+.+.+.+...
T Consensus 223 ~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 257 (273)
T 3bus_A 223 SLVKTAEAFENARSQ-VEPFMGAEGLDRMIATFRGL 257 (273)
T ss_dssp HHHHHHHHHHHTHHH-HHHHHCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhHHH-HHhhcCHHHHHHHHHHHHHH
Confidence 112333333333333 34557887777776666653
No 8
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.03 E-value=5.2e-08 Score=86.18 Aligned_cols=208 Identities=16% Similarity=0.154 Sum_probs=119.2
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+... + + -+|+.-|+-.. .-... ...... .+.. .++ ..+
T Consensus 49 ~vLDiG~G~G~~~~~l~~~------------~---~-~~v~~vD~s~~-~~~~a------~~~~~~-~~~~-~~~--~~~ 101 (257)
T 3f4k_A 49 KIADIGCGTGGQTLFLADY------------V---K-GQITGIDLFPD-FIEIF------NENAVK-ANCA-DRV--KGI 101 (257)
T ss_dssp EEEEETCTTSHHHHHHHHH------------C---C-SEEEEEESCHH-HHHHH------HHHHHH-TTCT-TTE--EEE
T ss_pred eEEEeCCCCCHHHHHHHHh------------C---C-CeEEEEECCHH-HHHHH------HHHHHH-cCCC-Cce--EEE
Confidence 7999999999987755432 1 2 16666664211 00000 111111 1110 112 123
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
-+++..--+|++++|+|+++.++||+ . ...+|+.-.+-|+|||++++..........
T Consensus 102 ~~d~~~~~~~~~~fD~v~~~~~l~~~-~----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~ 158 (257)
T 3f4k_A 102 TGSMDNLPFQNEELDLIWSEGAIYNI-G----------------------FERGMNEWSKYLKKGGFIAVSEASWFTSER 158 (257)
T ss_dssp ECCTTSCSSCTTCEEEEEEESCSCCC-C----------------------HHHHHHHHHTTEEEEEEEEEEEEEESSSCC
T ss_pred ECChhhCCCCCCCEEEEEecChHhhc-C----------------------HHHHHHHHHHHcCCCcEEEEEEeeccCCCC
Confidence 34443334678999999999999996 2 356777788999999999999876433221
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec-ccCCccCCCCCCCCcccc
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS-WLVGFVDGVDNKGSDKYA 241 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~-~~~~~~~~~~~~~~d~~~ 241 (300)
. ..+...|.. ..|. .++.+++...+++.| |++.....+... |...
T Consensus 159 ~--~~~~~~~~~----------------~~~~-~~~~~~~~~~l~~aG-f~~v~~~~~~~~~w~~~-------------- 204 (257)
T 3f4k_A 159 P--AEIEDFWMD----------------AYPE-ISVIPTCIDKMERAG-YTPTAHFILPENCWTEH-------------- 204 (257)
T ss_dssp C--HHHHHHHHH----------------HCTT-CCBHHHHHHHHHHTT-EEEEEEEECCGGGTCCC--------------
T ss_pred h--HHHHHHHHH----------------hCCC-CCCHHHHHHHHHHCC-CeEEEEEECChhhHHHH--------------
Confidence 1 233333432 1121 468999999999999 998886655332 5321
Q ss_pred hHHHHHHHHHHhhhhHHHhhhChhHHHHHHHHHHHHhhhhhhhcCCCCeEEEEEEEeeC
Q 045960 242 RGKYVTKHVRAVGESFLANLFDDATVDEIHRRFATKVTDVVLDKGRGAYASLLISLVKK 300 (300)
Q Consensus 242 ~~~~~a~~iRA~~ep~l~~hfge~i~delf~r~~~~~~~~~~~~~~~~~~~~~~~l~r~ 300 (300)
+...++...+.+...+-++...+++.++..+....+ ......+--.+++++|+
T Consensus 205 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~g~~~~v~~k~ 257 (257)
T 3f4k_A 205 ----YFAPQDEVRETFMKEHAGNKTAMDFMKGQQYERSLY--SKYKDYYGYVFYIGQKR 257 (257)
T ss_dssp ----CCHHHHHHHHHHHHHHTTCHHHHHHHHHHHHHHHHH--HHHTTTEEEEEEEEEEC
T ss_pred ----HHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHH--HHhCCccceEEEEEecC
Confidence 111122333344445555566666666666555543 23344556667777764
No 9
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.00 E-value=1.2e-07 Score=86.60 Aligned_cols=155 Identities=14% Similarity=0.117 Sum_probs=93.7
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHH
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVL 172 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al 172 (300)
++++|+|+|+.++|++.+. +.+ +-.+++..+|+.-.+-|+|||++++...+..+.. ..
T Consensus 135 ~~~fD~v~~~~~~~~~~d~-------~~~------~~~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~---------~~ 192 (302)
T 3hem_A 135 DEPVDRIVSLGAFEHFADG-------AGD------AGFERYDTFFKKFYNLTPDDGRMLLHTITIPDKE---------EA 192 (302)
T ss_dssp CCCCSEEEEESCGGGTTCC-------SSC------CCTTHHHHHHHHHHHSSCTTCEEEEEEEECCCHH---------HH
T ss_pred CCCccEEEEcchHHhcCcc-------ccc------cchhHHHHHHHHHHHhcCCCcEEEEEEEeccCcc---------ch
Confidence 7899999999999996542 000 0024577888889999999999999988765421 00
Q ss_pred HHHHHcCC-Cch------hhhccccCCCc-ccCCHHHHHHHHHhcCCeeEEEEEEEeecccCCccCCCCCCCCcccchHH
Q 045960 173 KDMISEGL-AEE------SKVKSFEDFPI-YRASVDEVKQIVKKEGSFDIQEVETFNVSWLVGFVDGVDNKGSDKYARGK 244 (300)
Q Consensus 173 ~~mv~eG~-i~~------e~~d~f~~~P~-y~~s~eE~~~~i~~~gsF~I~~~e~~~~~~~~~~~~~~~~~~~d~~~~~~ 244 (300)
. ..|. +.. +-+... .+|. +.|+++|+...+++.| |++.+++.+... +++
T Consensus 193 ~---~~~~~~~~~~~~~~~~~~~~-~~p~~~~~s~~~~~~~l~~aG-f~~~~~~~~~~~------------------y~~ 249 (302)
T 3hem_A 193 Q---ELGLTSPMSLLRFIKFILTE-IFPGGRLPRISQVDYYSSNAG-WKVERYHRIGAN------------------YVP 249 (302)
T ss_dssp H---HHTCCCCHHHHHHHHHHHHH-TCTTCCCCCHHHHHHHHHHHT-CEEEEEEECGGG------------------HHH
T ss_pred h---hccccccccccchHHHHHHh-cCCCCCCCCHHHHHHHHHhCC-cEEEEEEeCchh------------------HHH
Confidence 0 0110 000 111223 3554 7899999999999999 999888765322 233
Q ss_pred HHHHHHHHhhh--hHHHhhhChhHHHHHHHHHHHHhhhhhhhcCCCCeEEEE
Q 045960 245 YVTKHVRAVGE--SFLANLFDDATVDEIHRRFATKVTDVVLDKGRGAYASLL 294 (300)
Q Consensus 245 ~~a~~iRA~~e--p~l~~hfge~i~delf~r~~~~~~~~~~~~~~~~~~~~~ 294 (300)
.+..|.+.+-. +-+.+.+|++..+ .++.|-.-.+.- .+........++
T Consensus 250 tl~~w~~~~~~~~~~~~~~~~~~~~~-~w~~yl~~~~~~-f~~~~~~~~q~~ 299 (302)
T 3hem_A 250 TLNAWADALQAHKDEAIALKGQETCD-IYMHYLRGCSDL-FRDKYTDVCQFT 299 (302)
T ss_dssp HHHHHHHHHHHTHHHHHHHHCHHHHH-HHHHHHHHHHHH-HHTTSSEEEEEE
T ss_pred HHHHHHHHHHHhHHHHHHHhCHHHHH-HHHHHHHHHHHH-HhCCCCeEEEEE
Confidence 33334333222 2233447766554 577776666666 555555444433
No 10
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=98.99 E-value=1.4e-08 Score=89.83 Aligned_cols=192 Identities=17% Similarity=0.228 Sum_probs=112.4
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..+..+.... + .+|+.-|+-.+ ..+ ..++......++ ..
T Consensus 57 ~~vLdiG~G~G~~~~~l~~~~-----------~-----~~v~~vD~s~~-----------~~~-~a~~~~~~~~~~--~~ 106 (266)
T 3ujc_A 57 SKVLDIGSGLGGGCMYINEKY-----------G-----AHTHGIDICSN-----------IVN-MANERVSGNNKI--IF 106 (266)
T ss_dssp CEEEEETCTTSHHHHHHHHHH-----------C-----CEEEEEESCHH-----------HHH-HHHHTCCSCTTE--EE
T ss_pred CEEEEECCCCCHHHHHHHHHc-----------C-----CEEEEEeCCHH-----------HHH-HHHHHhhcCCCe--EE
Confidence 379999999998887654421 1 35555554211 000 011111000111 12
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+-+++..--+|++++|+|+++.++||++ ..|...+|+.-.+-|+|||++++.....+...
T Consensus 107 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~--------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 166 (266)
T 3ujc_A 107 EANDILTKEFPENNFDLIYSRDAILALS--------------------LENKNKLFQKCYKWLKPTGTLLITDYCATEKE 166 (266)
T ss_dssp EECCTTTCCCCTTCEEEEEEESCGGGSC--------------------HHHHHHHHHHHHHHEEEEEEEEEEEEEESCGG
T ss_pred EECccccCCCCCCcEEEEeHHHHHHhcC--------------------hHHHHHHHHHHHHHcCCCCEEEEEEeccCCcc
Confidence 3344444457889999999999999952 24577888889999999999999988766522
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeecccCCccCCCCCCCCcccc
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVSWLVGFVDGVDNKGSDKYA 241 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~~~~~~~~~~~~~~~d~~~ 241 (300)
... ..+...+. . .....++.++++.++++.| |++.+.+.+...+
T Consensus 167 ~~~-~~~~~~~~----~-------------~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~~----------------- 210 (266)
T 3ujc_A 167 NWD-DEFKEYVK----Q-------------RKYTLITVEEYADILTACN-FKNVVSKDLSDYW----------------- 210 (266)
T ss_dssp GCC-HHHHHHHH----H-------------HTCCCCCHHHHHHHHHHTT-CEEEEEEECHHHH-----------------
T ss_pred cch-HHHHHHHh----c-------------CCCCCCCHHHHHHHHHHcC-CeEEEEEeCCHHH-----------------
Confidence 222 22222211 1 1123568999999999999 9988776553221
Q ss_pred hHHHHHHHHHH---hhhhHHHhhhChhHHHHHHHHHHHHhhhh
Q 045960 242 RGKYVTKHVRA---VGESFLANLFDDATVDEIHRRFATKVTDV 281 (300)
Q Consensus 242 ~~~~~a~~iRA---~~ep~l~~hfge~i~delf~r~~~~~~~~ 281 (300)
...+..|.+. ....++ +.++++..+.+.+.....+...
T Consensus 211 -~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 251 (266)
T 3ujc_A 211 -NQLLEVEHKYLHENKEEFL-KLFSEKKFISLDDGWSRKIKDS 251 (266)
T ss_dssp -HHHHHHHHHHHHHTHHHHH-HHSCHHHHHHHHHHHHHHHHHH
T ss_pred -HHHHHHHHHHHHhCHHHHH-HhcCHHHHHHHHHHHHHHHHHH
Confidence 2222233322 222333 3367766666666666655543
No 11
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=98.95 E-value=4.6e-09 Score=91.91 Aligned_cols=170 Identities=15% Similarity=0.079 Sum_probs=107.1
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
.+|.|+||++|..+..+.... |..+|+.-|+-..=-. ...+... ..++ +..
T Consensus 46 ~~vLDiG~G~G~~~~~l~~~~---------------~~~~v~~vD~s~~~~~-----------~a~~~~~-~~~~--~~~ 96 (234)
T 3dtn_A 46 PDILDLGAGTGLLSAFLMEKY---------------PEATFTLVDMSEKMLE-----------IAKNRFR-GNLK--VKY 96 (234)
T ss_dssp CEEEEETCTTSHHHHHHHHHC---------------TTCEEEEEESCHHHHH-----------HHHHHTC-SCTT--EEE
T ss_pred CeEEEecCCCCHHHHHHHHhC---------------CCCeEEEEECCHHHHH-----------HHHHhhc-cCCC--EEE
Confidence 479999999998876554321 3467777775221100 0011100 0112 223
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.+.+..-.++ +++|+|+++.++||++. .+...+|+.-.+-|+|||++++.-...++..
T Consensus 97 ~~~d~~~~~~~-~~fD~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 155 (234)
T 3dtn_A 97 IEADYSKYDFE-EKYDMVVSALSIHHLED--------------------EDKKELYKRSYSILKESGIFINADLVHGETA 155 (234)
T ss_dssp EESCTTTCCCC-SCEEEEEEESCGGGSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEEECBCSSH
T ss_pred EeCchhccCCC-CCceEEEEeCccccCCH--------------------HHHHHHHHHHHHhcCCCcEEEEEEecCCCCh
Confidence 44566555555 89999999999999643 2245678888899999999999877654421
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccc-c-CCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSF-E-DFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS 223 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f-~-~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~ 223 (300)
... ......|.....++-.+.+++..+ . .--.+.++.+|+.++++++| |++.++.....+
T Consensus 156 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~aG-F~~v~~~~~~~~ 217 (234)
T 3dtn_A 156 FIE-NLNKTIWRQYVENSGLTEEEIAAGYERSKLDKDIEMNQQLNWLKEAG-FRDVSCIYKYYQ 217 (234)
T ss_dssp HHH-HHHHHHHHHHHHTSSCCHHHHHTTC----CCCCCBHHHHHHHHHHTT-CEEEEEEEEETT
T ss_pred hhh-hHHHHHHHHHHHhcCCCHHHHHHHHHhcccccccCHHHHHHHHHHcC-CCceeeeeeecc
Confidence 111 455566777766666666665542 0 12234579999999999999 988877655443
No 12
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=98.94 E-value=1.3e-08 Score=88.38 Aligned_cols=122 Identities=13% Similarity=0.034 Sum_probs=76.3
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+-+.+..--+|++++|+++++.++|++.. ..+...+|+.-.+-|+|||++++...+.....
T Consensus 88 ~~~d~~~~~~~~~~~D~v~~~~~l~~~~~-------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 148 (235)
T 3sm3_A 88 KVENASSLSFHDSSFDFAVMQAFLTSVPD-------------------PKERSRIIKEVFRVLKPGAYLYLVEFGQNWHL 148 (235)
T ss_dssp EECCTTSCCSCTTCEEEEEEESCGGGCCC-------------------HHHHHHHHHHHHHHEEEEEEEEEEEEBCCTTS
T ss_pred EEecccccCCCCCceeEEEEcchhhcCCC-------------------HHHHHHHHHHHHHHcCCCeEEEEEECCcchhH
Confidence 33444444578899999999999999654 22345788888899999999999987764322
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccc-cCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSF-EDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS 223 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f-~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~ 223 (300)
+.........+......|.......... .....++++.+|++.+++++| |++.+++....+
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~aG-f~~~~~~~~~~~ 210 (235)
T 3sm3_A 149 KLYRKRYLHDFPITKEEGSFLARDPETGETEFIAHHFTEKELVFLLTDCR-FEIDYFRVKELE 210 (235)
T ss_dssp HHHHHHHHHHHHHHCSTTEEEEECTTTCCEEEEEECBCHHHHHHHHHTTT-EEEEEEEEEEEE
T ss_pred HHHHHHhhhhccchhhhcceEecccccCCcceeeEeCCHHHHHHHHHHcC-CEEEEEEeccee
Confidence 1100111222222222222111111111 012346789999999999999 999998877544
No 13
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=98.90 E-value=1.2e-07 Score=84.88 Aligned_cols=150 Identities=17% Similarity=0.150 Sum_probs=93.0
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+.. . +..+|+.-|+-..= +......... .+.. +++ ..
T Consensus 48 ~~vLDiGcG~G~~~~~la~---------------~-~~~~v~gvD~s~~~-------~~~a~~~~~~-~~~~-~~v--~~ 100 (267)
T 3kkz_A 48 SLIADIGCGTGGQTMVLAG---------------H-VTGQVTGLDFLSGF-------IDIFNRNARQ-SGLQ-NRV--TG 100 (267)
T ss_dssp CEEEEETCTTCHHHHHHHT---------------T-CSSEEEEEESCHHH-------HHHHHHHHHH-TTCT-TTE--EE
T ss_pred CEEEEeCCCCCHHHHHHHh---------------c-cCCEEEEEeCCHHH-------HHHHHHHHHH-cCCC-cCc--EE
Confidence 3799999999988775431 1 33577777752210 0001111111 1110 112 12
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+-+++..--+|++++|+|+|+.++|++ . ...+|+.-.+-|+|||++++.........
T Consensus 101 ~~~d~~~~~~~~~~fD~i~~~~~~~~~-~----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 157 (267)
T 3kkz_A 101 IVGSMDDLPFRNEELDLIWSEGAIYNI-G----------------------FERGLNEWRKYLKKGGYLAVSECSWFTDE 157 (267)
T ss_dssp EECCTTSCCCCTTCEEEEEESSCGGGT-C----------------------HHHHHHHHGGGEEEEEEEEEEEEEESSSC
T ss_pred EEcChhhCCCCCCCEEEEEEcCCceec-C----------------------HHHHHHHHHHHcCCCCEEEEEEeeecCCC
Confidence 334444434678999999999999996 3 35678888899999999999887644322
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
.. ..+...|.+ ..| ..++.+++.+.+++.| |++.+++.+.
T Consensus 158 ~~--~~~~~~~~~----------------~~~-~~~~~~~~~~~l~~aG-f~~v~~~~~~ 197 (267)
T 3kkz_A 158 RP--AEINDFWMD----------------AYP-EIDTIPNQVAKIHKAG-YLPVATFILP 197 (267)
T ss_dssp CC--HHHHHHHHH----------------HCT-TCEEHHHHHHHHHHTT-EEEEEEEECC
T ss_pred Ch--HHHHHHHHH----------------hCC-CCCCHHHHHHHHHHCC-CEEEEEEECC
Confidence 21 233333331 123 4578999999999999 9988876653
No 14
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=98.86 E-value=2.5e-07 Score=83.86 Aligned_cols=151 Identities=17% Similarity=0.107 Sum_probs=93.2
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..+..+.... + .+|+.-|+... .-... ...... .+.. .++ ..
T Consensus 84 ~~vLDiGcG~G~~~~~l~~~~-----------~-----~~v~gvD~s~~-~~~~a------~~~~~~-~~~~-~~~--~~ 136 (297)
T 2o57_A 84 AKGLDLGAGYGGAARFLVRKF-----------G-----VSIDCLNIAPV-QNKRN------EEYNNQ-AGLA-DNI--TV 136 (297)
T ss_dssp CEEEEETCTTSHHHHHHHHHH-----------C-----CEEEEEESCHH-HHHHH------HHHHHH-HTCT-TTE--EE
T ss_pred CEEEEeCCCCCHHHHHHHHHh-----------C-----CEEEEEeCCHH-HHHHH------HHHHHh-cCCC-cce--EE
Confidence 379999999999887654321 1 35666664211 00111 011111 1110 112 22
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.+++..--+|++++|+|++..++||+.. ...+|+.-.+-|+|||++++......+..
T Consensus 137 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 194 (297)
T 2o57_A 137 KYGSFLEIPCEDNSYDFIWSQDAFLHSPD----------------------KLKVFQECARVLKPRGVMAITDPMKEDGI 194 (297)
T ss_dssp EECCTTSCSSCTTCEEEEEEESCGGGCSC----------------------HHHHHHHHHHHEEEEEEEEEEEEEECTTC
T ss_pred EEcCcccCCCCCCCEeEEEecchhhhcCC----------------------HHHHHHHHHHHcCCCeEEEEEEeccCCCC
Confidence 34555554578899999999999999644 46778888899999999999987665432
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
.. ..+...+. .+ ..| ..++++++.+++++.| |++.+++.+
T Consensus 195 ~~--~~~~~~~~--------------~~-~~~-~~~~~~~~~~~l~~aG-f~~~~~~~~ 234 (297)
T 2o57_A 195 DK--SSIQPILD--------------RI-KLH-DMGSLGLYRSLAKECG-LVTLRTFSR 234 (297)
T ss_dssp CG--GGGHHHHH--------------HH-TCS-SCCCHHHHHHHHHHTT-EEEEEEEEC
T ss_pred ch--HHHHHHHH--------------Hh-cCC-CCCCHHHHHHHHHHCC-CeEEEEEEC
Confidence 21 11222221 12 233 3568999999999999 998877655
No 15
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=98.86 E-value=1.2e-08 Score=88.21 Aligned_cols=160 Identities=14% Similarity=0.164 Sum_probs=100.3
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..+..+... ..+|+.-|.-..-- +....... .++ ..
T Consensus 47 ~~vLDiGcG~G~~~~~l~~~-----------------~~~v~~vD~s~~~~-----------~~a~~~~~---~~~--~~ 93 (220)
T 3hnr_A 47 GNVLEFGVGTGNLTNKLLLA-----------------GRTVYGIEPSREMR-----------MIAKEKLP---KEF--SI 93 (220)
T ss_dssp SEEEEECCTTSHHHHHHHHT-----------------TCEEEEECSCHHHH-----------HHHHHHSC---TTC--CE
T ss_pred CeEEEeCCCCCHHHHHHHhC-----------------CCeEEEEeCCHHHH-----------HHHHHhCC---Cce--EE
Confidence 37999999999877765431 14566666422100 00001100 011 12
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+-+.+..--+| +++|+++++.++||+.. .+...+|+.-.+-|+|||++++......+.
T Consensus 94 ~~~d~~~~~~~-~~fD~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~- 151 (220)
T 3hnr_A 94 TEGDFLSFEVP-TSIDTIVSTYAFHHLTD--------------------DEKNVAIAKYSQLLNKGGKIVFADTIFADQ- 151 (220)
T ss_dssp ESCCSSSCCCC-SCCSEEEEESCGGGSCH--------------------HHHHHHHHHHHHHSCTTCEEEEEEECBSSH-
T ss_pred EeCChhhcCCC-CCeEEEEECcchhcCCh--------------------HHHHHHHHHHHHhcCCCCEEEEEeccccCh-
Confidence 34455554556 89999999999999544 112457888889999999999987554432
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeeccc
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVSWL 225 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~~~ 225 (300)
......+..+...|.... ..- ..+.++++.+|++.++++.| |++...+.....|-
T Consensus 152 ----~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~~~w~ 206 (220)
T 3hnr_A 152 ----DAYDKTVEAAKQRGFHQL---AND-LQTEYYTRIPVMQTIFENNG-FHVTFTRLNHFVWV 206 (220)
T ss_dssp ----HHHHHHHHHHHHTTCHHH---HHH-HHHSCCCBHHHHHHHHHHTT-EEEEEEECSSSEEE
T ss_pred ----HHHHHHHHHHHhCCCccc---hhh-cchhhcCCHHHHHHHHHHCC-CEEEEeeccceEEE
Confidence 334455555555554321 111 23456779999999999999 99988877655553
No 16
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=98.84 E-value=8.5e-07 Score=79.95 Aligned_cols=97 Identities=19% Similarity=0.268 Sum_probs=64.1
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC-----CCc
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA-----TPG 165 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~-----~~~ 165 (300)
+| +++|+|+|..++|++.. .|...+|+.-.+-|+|||++++......+... ...
T Consensus 126 ~~-~~fD~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~ 184 (287)
T 1kpg_A 126 FD-EPVDRIVSIGAFEHFGH--------------------ERYDAFFSLAHRLLPADGVMLLHTITGLHPKEIHERGLPM 184 (287)
T ss_dssp CC-CCCSEEEEESCGGGTCT--------------------TTHHHHHHHHHHHSCTTCEEEEEEEEECCHHHHTTTTCSC
T ss_pred CC-CCeeEEEEeCchhhcCh--------------------HHHHHHHHHHHHhcCCCCEEEEEEecCCCccccccccccc
Confidence 45 89999999999999642 13677888888999999999999887654210 000
Q ss_pred hHHHHHHHHHHHcCCCchhhhccccCCC-cccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 166 EPMLMVLKDMISEGLAEESKVKSFEDFP-IYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 166 ~~l~~al~~mv~eG~i~~e~~d~f~~~P-~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
..-...+.+... .. .+| ...|+++|+.+.+++.| |++.+++.+
T Consensus 185 ~~~~~~~~~~~~----------~~-~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 228 (287)
T 1kpg_A 185 SFTFARFLKFIV----------TE-IFPGGRLPSIPMVQECASANG-FTVTRVQSL 228 (287)
T ss_dssp HHHHHHHHHHHH----------HH-TSTTCCCCCHHHHHHHHHTTT-CEEEEEEEC
T ss_pred cccccchhhhHH----------he-eCCCCCCCCHHHHHHHHHhCC-cEEEEEEeC
Confidence 000001111111 11 122 24579999999999999 999887754
No 17
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=98.82 E-value=7.5e-08 Score=85.71 Aligned_cols=103 Identities=14% Similarity=0.208 Sum_probs=69.2
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
-+.+..--+|++++|+|+|+.++||+.. ...+|+.-.+-|+|||++++.....++.
T Consensus 91 ~~d~~~l~~~~~~fD~V~~~~~l~~~~d----------------------~~~~l~~~~r~LkpgG~l~~~~~~~~~~-- 146 (260)
T 1vl5_A 91 QGDAEQMPFTDERFHIVTCRIAAHHFPN----------------------PASFVSEAYRVLKKGGQLLLVDNSAPEN-- 146 (260)
T ss_dssp ECCC-CCCSCTTCEEEEEEESCGGGCSC----------------------HHHHHHHHHHHEEEEEEEEEEEEEBCSS--
T ss_pred EecHHhCCCCCCCEEEEEEhhhhHhcCC----------------------HHHHHHHHHHHcCCCCEEEEEEcCCCCC--
Confidence 3455544478899999999999999644 4567777889999999999987655432
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS 223 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~ 223 (300)
..+...+..+ .. ...- ......+.+++..++++.| |++..++....+
T Consensus 147 ---~~~~~~~~~~-~~-------~~~~--~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~ 193 (260)
T 1vl5_A 147 ---DAFDVFYNYV-EK-------ERDY--SHHRAWKKSDWLKMLEEAG-FELEELHCFHKT 193 (260)
T ss_dssp ---HHHHHHHHHH-HH-------HHCT--TCCCCCBHHHHHHHHHHHT-CEEEEEEEEEEE
T ss_pred ---HHHHHHHHHH-HH-------hcCc--cccCCCCHHHHHHHHHHCC-CeEEEEEEeecc
Confidence 1222222211 10 1111 1224568999999999999 999888777544
No 18
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=98.81 E-value=2.6e-07 Score=84.21 Aligned_cols=148 Identities=13% Similarity=0.112 Sum_probs=84.7
Q ss_pred CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHHH
Q 045960 94 NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVLK 173 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al~ 173 (300)
+++|+|+++.++||+ . +..+|+.-.+-|+|||++++...+.+..... ..+...+.
T Consensus 112 ~~fD~V~~~~~l~~~-~----------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~~~--~~~~~~~~ 166 (299)
T 3g5t_A 112 QKIDMITAVECAHWF-D----------------------FEKFQRSAYANLRKDGTIAIWGYADPIFPDY--PEFDDLMI 166 (299)
T ss_dssp SCEEEEEEESCGGGS-C----------------------HHHHHHHHHHHEEEEEEEEEEEEEEEECTTC--GGGTTHHH
T ss_pred CCeeEEeHhhHHHHh-C----------------------HHHHHHHHHHhcCCCcEEEEEecCCccccCc--HHHHHHHH
Confidence 899999999999997 4 5678888889999999999876655322111 12333444
Q ss_pred HHHHcCCCchhhhccccCCCccc-CCHHHHHHHHHhcCC----eeEEEEEEEeec-ccCCccC----CCCCCCCcccchH
Q 045960 174 DMISEGLAEESKVKSFEDFPIYR-ASVDEVKQIVKKEGS----FDIQEVETFNVS-WLVGFVD----GVDNKGSDKYARG 243 (300)
Q Consensus 174 ~mv~eG~i~~e~~d~f~~~P~y~-~s~eE~~~~i~~~gs----F~I~~~e~~~~~-~~~~~~~----~~~~~~~d~~~~~ 243 (300)
++.... .. .-|++. |+.+.++..+++.|- |.-.+.+.+... |... .. ............-
T Consensus 167 ~~~~~~--------~~-~~~~w~~p~~~~~~~~l~~~gfp~~~f~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 236 (299)
T 3g5t_A 167 EVPYGK--------QG-LGPYWEQPGRSRLRNMLKDSHLDPELFHDIQVSYFCAEDVRDK-VKLHQHTKKPLLIRKQVTL 236 (299)
T ss_dssp HHHHCT--------TT-TGGGSCTTHHHHHHTTTTTCCCCTTTEEEEEEEEECGGGGGCH-HHHHHCSSCCCCCEEEECH
T ss_pred HhccCc--------cc-ccchhhchhhHHHHHhhhccCCChHHcCcceEEEecccccccc-cccccCCCCceeeeccccH
Confidence 433221 12 355555 889999999999882 343333333221 2220 00 0000001223446
Q ss_pred HHHHHHHHHhhh--hHHHh-hhCh--hHHHHHHHH-HHH
Q 045960 244 KYVTKHVRAVGE--SFLAN-LFDD--ATVDEIHRR-FAT 276 (300)
Q Consensus 244 ~~~a~~iRA~~e--p~l~~-hfge--~i~delf~r-~~~ 276 (300)
..+..++|++.. ..... .-++ ++++++.++ +++
T Consensus 237 ~~~~~~l~t~s~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 275 (299)
T 3g5t_A 237 VEFADYVRTWSAYHQWKQDPKNKDKEDVADWFIKESLRR 275 (299)
T ss_dssp HHHHHHHTTSHHHHHHHHCGGGTTSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhHHHHHHHhcccCCchhhHHHHHHHHHHHh
Confidence 788888886654 22220 1233 677777766 444
No 19
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=98.77 E-value=4.1e-07 Score=80.23 Aligned_cols=102 Identities=18% Similarity=0.292 Sum_probs=68.2
Q ss_pred CccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCC
Q 045960 84 GSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHAT 163 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~ 163 (300)
+.+..--+|++++|+|+++.++||+.. ...+|+.-.+-|+|||++++.....++.
T Consensus 76 ~d~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~--- 130 (239)
T 1xxl_A 76 GTAESLPFPDDSFDIITCRYAAHHFSD----------------------VRKAVREVARVLKQDGRFLLVDHYAPED--- 130 (239)
T ss_dssp CBTTBCCSCTTCEEEEEEESCGGGCSC----------------------HHHHHHHHHHHEEEEEEEEEEEECBCSS---
T ss_pred cccccCCCCCCcEEEEEECCchhhccC----------------------HHHHHHHHHHHcCCCcEEEEEEcCCCCC---
Confidence 344443478899999999999999644 4567777889999999999976654432
Q ss_pred CchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec
Q 045960 164 PGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS 223 (300)
Q Consensus 164 ~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~ 223 (300)
..+...+..+ .. ..+. ......+.+|+..++++.| |++.+++....+
T Consensus 131 --~~~~~~~~~~-~~------~~~~---~~~~~~~~~~~~~ll~~aG-f~~~~~~~~~~~ 177 (239)
T 1xxl_A 131 --PVLDEFVNHL-NR------LRDP---SHVRESSLSEWQAMFSANQ-LAYQDIQKWNLP 177 (239)
T ss_dssp --HHHHHHHHHH-HH------HHCT---TCCCCCBHHHHHHHHHHTT-EEEEEEEEEEEE
T ss_pred --hhHHHHHHHH-HH------hccc---cccCCCCHHHHHHHHHHCC-CcEEEEEeecCc
Confidence 1222222211 10 0011 1123458999999999999 998888776544
No 20
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=98.76 E-value=4.4e-08 Score=89.01 Aligned_cols=163 Identities=18% Similarity=0.228 Sum_probs=90.4
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+.. .. ..+..+|+.-|+-. +. |....+.... .+.. .++ .-+
T Consensus 73 ~vLDlGcGtG~~~~~la~--------~~-----~~~~~~v~gvD~s~-~m------l~~A~~~~~~-~~~~-~~v--~~~ 128 (261)
T 4gek_A 73 QVYDLGCSLGAATLSVRR--------NI-----HHDNCKIIAIDNSP-AM------IERCRRHIDA-YKAP-TPV--DVI 128 (261)
T ss_dssp EEEEETCTTTHHHHHHHH--------TC-----CSSSCEEEEEESCH-HH------HHHHHHHHHT-SCCS-SCE--EEE
T ss_pred EEEEEeCCCCHHHHHHHH--------hc-----CCCCCEEEEEECCH-HH------HHHHHHHHHh-hccC-ceE--EEe
Confidence 799999999988765432 11 23456777777421 00 1111111111 1111 122 112
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
-|.+.+ +|-.++|+++|+++|||+.. .|...+|+.-++-|+|||+|++.=.......
T Consensus 129 ~~D~~~--~~~~~~d~v~~~~~l~~~~~--------------------~~~~~~l~~i~~~LkpGG~lii~e~~~~~~~- 185 (261)
T 4gek_A 129 EGDIRD--IAIENASMVVLNFTLQFLEP--------------------SERQALLDKIYQGLNPGGALVLSEKFSFEDA- 185 (261)
T ss_dssp ESCTTT--CCCCSEEEEEEESCGGGSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEEEBCCSSH-
T ss_pred eccccc--ccccccccceeeeeeeecCc--------------------hhHhHHHHHHHHHcCCCcEEEEEeccCCCCH-
Confidence 344433 46677999999999999532 2456788888999999999998754433211
Q ss_pred CCchHHHHHHHHHHH-cCCCchhhhc----cccCCCcccCCHHHHHHHHHhcCCeeEE
Q 045960 163 TPGEPMLMVLKDMIS-EGLAEESKVK----SFEDFPIYRASVDEVKQIVKKEGSFDIQ 215 (300)
Q Consensus 163 ~~~~~l~~al~~mv~-eG~i~~e~~d----~f~~~P~y~~s~eE~~~~i~~~gsF~I~ 215 (300)
...+.+...+.+... .|. ++.++. .. .-.....|.+|+++.++++| |+-.
T Consensus 186 ~~~~~~~~~~~~~~~~~g~-s~~ei~~~~~~l-~~~~~~~s~~~~~~~L~~AG-F~~v 240 (261)
T 4gek_A 186 KVGELLFNMHHDFKRANGY-SELEISQKRSML-ENVMLTDSVETHKARLHKAG-FEHS 240 (261)
T ss_dssp HHHHHHHHHHHHHHHHTTG-GGSTTHHHHHHH-HHHCCCBCHHHHHHHHHHHT-CSEE
T ss_pred HHHHHHHHHHHHHHHHcCC-CHHHHHHHHhhh-cccccCCCHHHHHHHHHHcC-CCeE
Confidence 111333333433332 343 222221 11 11123468999999999999 7643
No 21
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=98.76 E-value=5.8e-08 Score=87.03 Aligned_cols=161 Identities=14% Similarity=0.185 Sum_probs=94.8
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|+|+||++|..+..+... .|..+|+.-|.-.+-.... ...... .+ .++ +..
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~---------------~~~~~v~~vD~s~~~~~~a-------~~~~~~-~~--~~~--~~~ 91 (276)
T 3mgg_A 39 AKVLEAGCGIGAQTVILAKN---------------NPDAEITSIDISPESLEKA-------RENTEK-NG--IKN--VKF 91 (276)
T ss_dssp CEEEETTCTTSHHHHHHHHH---------------CTTSEEEEEESCHHHHHHH-------HHHHHH-TT--CCS--EEE
T ss_pred CeEEEecCCCCHHHHHHHHh---------------CCCCEEEEEECCHHHHHHH-------HHHHHH-cC--CCC--cEE
Confidence 37999999999877654321 1335777777522111111 011111 11 122 222
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+-+....-.+|++++|+|+++.++||+.. ...+|+.-.+-|+|||++++.....+...
T Consensus 92 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 149 (276)
T 3mgg_A 92 LQANIFSLPFEDSSFDHIFVCFVLEHLQS----------------------PEEALKSLKKVLKPGGTITVIEGDHGSCY 149 (276)
T ss_dssp EECCGGGCCSCTTCEEEEEEESCGGGCSC----------------------HHHHHHHHHHHEEEEEEEEEEEECGGGCE
T ss_pred EEcccccCCCCCCCeeEEEEechhhhcCC----------------------HHHHHHHHHHHcCCCcEEEEEEcCCCCce
Confidence 33455555688999999999999999654 34677778889999999999876543321
Q ss_pred --CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec
Q 045960 162 --ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS 223 (300)
Q Consensus 162 --~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~ 223 (300)
+.. ..+...+..+.... ..... ...+.+++..+++++| |++.+++....+
T Consensus 150 ~~~~~-~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~l~~~l~~aG-f~~v~~~~~~~~ 201 (276)
T 3mgg_A 150 FHPEG-KKAIEAWNCLIRVQ-----AYMKG-----NSLVGRQIYPLLQESG-FEKIRVEPRMVY 201 (276)
T ss_dssp EESCC-HHHHHHHHHHHHHH-----HHTTC-----CTTGGGGHHHHHHHTT-CEEEEEEEEEEE
T ss_pred ECCCc-HHHHHHHHHHHHHH-----HhcCC-----CcchHHHHHHHHHHCC-CCeEEEeeEEEE
Confidence 111 22333333222110 00111 1235578999999999 999888877554
No 22
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.75 E-value=4e-08 Score=84.03 Aligned_cols=96 Identities=11% Similarity=0.127 Sum_probs=73.7
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+-+++..--+|++++|+|+++.++|+++. +|...+|+.-++-|+|||++++........
T Consensus 89 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~~~~~~~~- 147 (203)
T 3h2b_A 89 HHGTITDLSDSPKRWAGLLAWYSLIHMGP--------------------GELPDALVALRMAVEDGGGLLMSFFSGPSL- 147 (203)
T ss_dssp ECCCGGGGGGSCCCEEEEEEESSSTTCCT--------------------TTHHHHHHHHHHTEEEEEEEEEEEECCSSC-
T ss_pred EeCcccccccCCCCeEEEEehhhHhcCCH--------------------HHHHHHHHHHHHHcCCCcEEEEEEccCCch-
Confidence 34455544478899999999999999642 246778888899999999999998655431
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEee
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNV 222 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~ 222 (300)
..++.. ..+.+..+.+|+++++++.| |++.+++.+..
T Consensus 148 ----------------------~~~~~~-~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~ 184 (203)
T 3h2b_A 148 ----------------------EPMYHP-VATAYRWPLPELAQALETAG-FQVTSSHWDPR 184 (203)
T ss_dssp ----------------------EEECCS-SSCEEECCHHHHHHHHHHTT-EEEEEEEECTT
T ss_pred ----------------------hhhhch-hhhhccCCHHHHHHHHHHCC-CcEEEEEecCC
Confidence 113334 46778899999999999999 99999887754
No 23
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=98.73 E-value=2.1e-07 Score=81.04 Aligned_cols=97 Identities=11% Similarity=0.097 Sum_probs=65.2
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHH-HhhccCceeEEEEeecCCCCCCCchHH
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRS-EELKSQGRMVLTLLYNDNFHATPGEPM 168 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra-~EL~~GG~~vl~~~g~~~~~~~~~~~l 168 (300)
++|++++|+|+++.+||++.. ...+|+.-+ +-|+|||++++..+.... +
T Consensus 98 ~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~~LkpgG~l~i~~~~~~~--------~ 147 (250)
T 2p7i_A 98 AQLPRRYDNIVLTHVLEHIDD----------------------PVALLKRINDDWLAEGGRLFLVCPNANA--------V 147 (250)
T ss_dssp CCCSSCEEEEEEESCGGGCSS----------------------HHHHHHHHHHTTEEEEEEEEEEEECTTC--------H
T ss_pred cCcCCcccEEEEhhHHHhhcC----------------------HHHHHHHHHHHhcCCCCEEEEEcCChHH--------H
Confidence 378999999999999999644 456777788 899999999998864432 1
Q ss_pred HHHHHHHHHcCCCchhh----hccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 169 LMVLKDMISEGLAEESK----VKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 169 ~~al~~mv~eG~i~~e~----~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
...+. ...|.+.... .+.. .--....+.+++++++++.| |++.+.+.+
T Consensus 148 ~~~~~--~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 199 (250)
T 2p7i_A 148 SRQIA--VKMGIISHNSAVTEAEFA-HGHRCTYALDTLERDASRAG-LQVTYRSGI 199 (250)
T ss_dssp HHHHH--HHTTSSSSTTCCCHHHHH-TTCCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred HHHHH--HHcCccccchhccccccc-ccccccCCHHHHHHHHHHCC-CeEEEEeee
Confidence 11111 1123333211 0101 11224579999999999999 999888765
No 24
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=98.70 E-value=2.8e-07 Score=83.16 Aligned_cols=111 Identities=14% Similarity=0.168 Sum_probs=72.1
Q ss_pred Ccccccc-CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 84 GSFYTRL-FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 84 gSFy~~l-~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
+++..-. ++++++|+|+++.++||+.. ...+|+.-++-|+|||++++..........
T Consensus 124 ~d~~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 181 (285)
T 4htf_A 124 CAAQDVASHLETPVDLILFHAVLEWVAD----------------------PRSVLQTLWSVLRPGGVLSLMFYNAHGLLM 181 (285)
T ss_dssp SCGGGTGGGCSSCEEEEEEESCGGGCSC----------------------HHHHHHHHHHTEEEEEEEEEEEEBHHHHHH
T ss_pred cCHHHhhhhcCCCceEEEECchhhcccC----------------------HHHHHHHHHHHcCCCeEEEEEEeCCchHHH
Confidence 4444443 68899999999999999644 456788888999999999999876542100
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS 223 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~ 223 (300)
. ..+...+. ....+.... . ... .-|.++.+++|+++++++.| |++.+.+.+...
T Consensus 182 -~-~~~~~~~~-~~~~~~~~~-~-~~~-~~~~~~~~~~~l~~~l~~aG-f~v~~~~~~~~~ 235 (285)
T 4htf_A 182 -H-NMVAGNFD-YVQAGMPKK-K-KRT-LSPDYPRDPTQVYLWLEEAG-WQIMGKTGVRVF 235 (285)
T ss_dssp -H-HHHTTCHH-HHHTTCCCC-------CCCSCCBCHHHHHHHHHHTT-CEEEEEEEESSS
T ss_pred -H-HHHhcCHH-HHhhhcccc-c-ccc-CCCCCCCCHHHHHHHHHHCC-CceeeeeeEEEe
Confidence 0 00000111 112222111 1 112 24567889999999999999 999988877544
No 25
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=98.70 E-value=4.5e-07 Score=80.01 Aligned_cols=96 Identities=13% Similarity=0.060 Sum_probs=63.6
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.+++..-.+ ++++|+|+|+.++|++.. ...+|+.-.+-|||||++++.........
T Consensus 91 ~~~d~~~~~~-~~~fD~V~~~~~~~~~~~----------------------~~~~l~~~~r~LkpgG~l~~~~~~~~~~~ 147 (256)
T 1nkv_A 91 IHNDAAGYVA-NEKCDVAACVGATWIAGG----------------------FAGAEELLAQSLKPGGIMLIGEPYWRQLP 147 (256)
T ss_dssp EESCCTTCCC-SSCEEEEEEESCGGGTSS----------------------SHHHHHHHTTSEEEEEEEEEEEEEETTCC
T ss_pred EECChHhCCc-CCCCCEEEECCChHhcCC----------------------HHHHHHHHHHHcCCCeEEEEecCcccCCC
Confidence 3455554333 789999999999999654 35567777889999999999876543321
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
.. . .+.. .. .. .....+++.+++.+++++.| |++.+++.
T Consensus 148 -~~-~----~~~~----~~------~~--~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 186 (256)
T 1nkv_A 148 -AT-E----EIAQ----AC------GV--SSTSDFLTLPGLVGAFDDLG-YDVVEMVL 186 (256)
T ss_dssp -SS-H----HHHH----TT------TC--SCGGGSCCHHHHHHHHHTTT-BCCCEEEE
T ss_pred -Ch-H----HHHH----HH------hc--ccccccCCHHHHHHHHHHCC-CeeEEEEe
Confidence 11 1 1111 10 11 11235679999999999999 88766553
No 26
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=98.68 E-value=7.9e-07 Score=81.58 Aligned_cols=100 Identities=15% Similarity=0.134 Sum_probs=63.1
Q ss_pred CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHHH
Q 045960 94 NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVLK 173 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al~ 173 (300)
+++|+|+|+.++|++.. .|...+|+.-.+-|+|||++++......+........+...+.
T Consensus 154 ~~fD~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~~~~~~ 213 (318)
T 2fk8_A 154 EPVDRIVSIEAFEHFGH--------------------ENYDDFFKRCFNIMPADGRMTVQSSVSYHPYEMAARGKKLSFE 213 (318)
T ss_dssp CCCSEEEEESCGGGTCG--------------------GGHHHHHHHHHHHSCTTCEEEEEEEECCCHHHHHTTCHHHHHH
T ss_pred CCcCEEEEeChHHhcCH--------------------HHHHHHHHHHHHhcCCCcEEEEEEeccCCchhhhhcccccccc
Confidence 78999999999999532 2467788888899999999999988765421000000000000
Q ss_pred HHHHcCCCchhhhccccCCC-cccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 174 DMISEGLAEESKVKSFEDFP-IYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 174 ~mv~eG~i~~e~~d~f~~~P-~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
.... .+-+... .+| .+.|+.+|+.+.+++.| |++.+++.+
T Consensus 214 ~~~~-----~~~~~~~-~~~~~~~~s~~~~~~~l~~aG-f~~~~~~~~ 254 (318)
T 2fk8_A 214 TARF-----IKFIVTE-IFPGGRLPSTEMMVEHGEKAG-FTVPEPLSL 254 (318)
T ss_dssp HHHH-----HHHHHHH-TSTTCCCCCHHHHHHHHHHTT-CBCCCCEEC
T ss_pred ccch-----hhHHHHh-cCCCCcCCCHHHHHHHHHhCC-CEEEEEEec
Confidence 0000 0001112 234 46679999999999999 888766554
No 27
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=98.68 E-value=2.6e-07 Score=79.69 Aligned_cols=144 Identities=17% Similarity=0.142 Sum_probs=91.9
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|+|+||++|..+..+.... .|..+|+.-|.-..--. . ....... .+. .++ ..
T Consensus 39 ~~vLDiG~G~G~~~~~l~~~~--------------~~~~~v~~vD~s~~~~~-~------a~~~~~~-~~~--~~~--~~ 92 (219)
T 3dh0_A 39 MTVLDVGTGAGFYLPYLSKMV--------------GEKGKVYAIDVQEEMVN-Y------AWEKVNK-LGL--KNV--EV 92 (219)
T ss_dssp CEEEESSCTTCTTHHHHHHHH--------------TTTCEEEEEESCHHHHH-H------HHHHHHH-HTC--TTE--EE
T ss_pred CEEEEEecCCCHHHHHHHHHh--------------CCCcEEEEEECCHHHHH-H------HHHHHHH-cCC--CcE--EE
Confidence 379999999999887654321 13467777775221110 0 1111111 111 122 12
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+-+.+..--+|++++|+++++.++||+.+ ...+|+.-.+-|+|||++++.........
T Consensus 93 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 150 (219)
T 3dh0_A 93 LKSEENKIPLPDNTVDFIFMAFTFHELSE----------------------PLKFLEELKRVAKPFAYLAIIDWKKEERD 150 (219)
T ss_dssp EECBTTBCSSCSSCEEEEEEESCGGGCSS----------------------HHHHHHHHHHHEEEEEEEEEEEECSSCCS
T ss_pred EecccccCCCCCCCeeEEEeehhhhhcCC----------------------HHHHHHHHHHHhCCCeEEEEEEecccccc
Confidence 33444444578999999999999999644 46677778889999999999865444321
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
.- .......+.+|++..+++.| |++.+...+.
T Consensus 151 --------------------------~~-~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~ 182 (219)
T 3dh0_A 151 --------------------------KG-PPPEEVYSEWEVGLILEDAG-IRVGRVVEVG 182 (219)
T ss_dssp --------------------------SS-CCGGGSCCHHHHHHHHHHTT-CEEEEEEEET
T ss_pred --------------------------cC-CchhcccCHHHHHHHHHHCC-CEEEEEEeeC
Confidence 00 12234568999999999999 9988876553
No 28
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.68 E-value=2.3e-07 Score=84.56 Aligned_cols=89 Identities=16% Similarity=0.150 Sum_probs=61.7
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHH
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLM 170 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~ 170 (300)
||++++|+|+++.+|||+.+ +..+|+.-++-|||||++++....... .+..
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d----------------------~~~~l~~~~r~LkpgG~l~i~~~~~~~-------~~~~ 181 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD----------------------IPATLKFFHSLLGTNAKMLIIVVSGSS-------GWDK 181 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC----------------------HHHHHHHHHHTEEEEEEEEEEEECTTS-------HHHH
T ss_pred cCCCceeEEEEeeeeeecCC----------------------HHHHHHHHHHHcCCCcEEEEEEecCCc-------cHHH
Confidence 57899999999999999544 567788888999999999998754321 1223
Q ss_pred HHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEE
Q 045960 171 VLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVE 218 (300)
Q Consensus 171 al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e 218 (300)
.+.+.... +. - .-...+++++|+.+++++.| |++.+.+
T Consensus 182 ~~~~~~~~--~~------~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~ 219 (292)
T 2aot_A 182 LWKKYGSR--FP------Q-DDLCQYITSDDLTQMLDNLG-LKYECYD 219 (292)
T ss_dssp HHHHHGGG--SC------C-CTTCCCCCHHHHHHHHHHHT-CCEEEEE
T ss_pred HHHHHHHh--cc------C-CCcccCCCHHHHHHHHHHCC-CceEEEE
Confidence 33332111 00 0 01135678999999999999 8877643
No 29
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=98.67 E-value=2.8e-07 Score=79.00 Aligned_cols=157 Identities=11% Similarity=0.044 Sum_probs=90.3
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..+..+... + .+|+.-|+-. ...+. .+..+. .++ ..+
T Consensus 49 ~vLdiG~G~G~~~~~l~~~------------~-----~~v~~~D~s~-----------~~~~~-a~~~~~--~~~--~~~ 95 (218)
T 3ou2_A 49 DVLELASGTGYWTRHLSGL------------A-----DRVTALDGSA-----------EMIAE-AGRHGL--DNV--EFR 95 (218)
T ss_dssp EEEEESCTTSHHHHHHHHH------------S-----SEEEEEESCH-----------HHHHH-HGGGCC--TTE--EEE
T ss_pred eEEEECCCCCHHHHHHHhc------------C-----CeEEEEeCCH-----------HHHHH-HHhcCC--CCe--EEE
Confidence 7999999999987765432 1 3555555421 00000 011111 222 223
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
.+.+..- +|++++|+++++.++||+.. .++..+|+.-.+-|+|||++++...++....
T Consensus 96 ~~d~~~~-~~~~~~D~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~- 153 (218)
T 3ou2_A 96 QQDLFDW-TPDRQWDAVFFAHWLAHVPD--------------------DRFEAFWESVRSAVAPGGVVEFVDVTDHERR- 153 (218)
T ss_dssp ECCTTSC-CCSSCEEEEEEESCGGGSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEEECCCC---
T ss_pred ecccccC-CCCCceeEEEEechhhcCCH--------------------HHHHHHHHHHHHHcCCCeEEEEEeCCCCccc-
Confidence 3455443 89999999999999999543 2357788888899999999999988774321
Q ss_pred CCchHHHHHHHHHHHcCCCchh-hhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 163 TPGEPMLMVLKDMISEGLAEES-KVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e-~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
+...+...........- .-..+ .....+++++|+.+++++.| |+++..+...
T Consensus 154 -----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~l~~aG-f~v~~~~~~~ 206 (218)
T 3ou2_A 154 -----LEQQDDSEPEVAVRRTLQDGRSF-RIVKVFRSPAELTERLTALG-WSCSVDEVHP 206 (218)
T ss_dssp ---------------CEEEEECTTSCEE-EEECCCCCHHHHHHHHHHTT-EEEEEEEEET
T ss_pred -----cchhhhcccccceeeecCCcchh-hHhhcCCCHHHHHHHHHHCC-CEEEeeeccc
Confidence 11111110011000000 00001 11123679999999999999 9988777654
No 30
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=98.67 E-value=1.4e-07 Score=82.72 Aligned_cols=142 Identities=16% Similarity=0.210 Sum_probs=92.0
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..+..+.. +..+|+..|.-.+=-... ...... .+. ..+ +..+
T Consensus 69 ~vLDiGcG~G~~~~~l~~-----------------~~~~v~gvD~s~~~~~~a-------~~~~~~-~~~-~~~--v~~~ 120 (235)
T 3lcc_A 69 RALVPGCGGGHDVVAMAS-----------------PERFVVGLDISESALAKA-------NETYGS-SPK-AEY--FSFV 120 (235)
T ss_dssp EEEEETCTTCHHHHHHCB-----------------TTEEEEEECSCHHHHHHH-------HHHHTT-SGG-GGG--EEEE
T ss_pred CEEEeCCCCCHHHHHHHh-----------------CCCeEEEEECCHHHHHHH-------HHHhhc-cCC-Ccc--eEEE
Confidence 799999999998875421 235677777532111111 011100 000 011 2234
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
-+.+.. +.|+.++|+|+++.++||+.. .|...+|+.-++-|+|||++++.......
T Consensus 121 ~~d~~~-~~~~~~fD~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--- 176 (235)
T 3lcc_A 121 KEDVFT-WRPTELFDLIFDYVFFCAIEP--------------------EMRPAWAKSMYELLKPDGELITLMYPITD--- 176 (235)
T ss_dssp CCCTTT-CCCSSCEEEEEEESSTTTSCG--------------------GGHHHHHHHHHHHEEEEEEEEEEECCCSC---
T ss_pred ECchhc-CCCCCCeeEEEEChhhhcCCH--------------------HHHHHHHHHHHHHCCCCcEEEEEEecccc---
Confidence 445544 457789999999999999642 24677888888999999999887643321
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS 223 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~ 223 (300)
.. .-|.|..+.+|++.++++.| |++.+++....+
T Consensus 177 -------------------------~~-~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~ 210 (235)
T 3lcc_A 177 -------------------------HV-GGPPYKVDVSTFEEVLVPIG-FKAVSVEENPHA 210 (235)
T ss_dssp -------------------------CC-SCSSCCCCHHHHHHHHGGGT-EEEEEEEECTTC
T ss_pred -------------------------cC-CCCCccCCHHHHHHHHHHcC-CeEEEEEecCCc
Confidence 11 33446689999999999999 999998877544
No 31
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=98.65 E-value=5.7e-07 Score=77.37 Aligned_cols=101 Identities=16% Similarity=0.189 Sum_probs=67.7
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHH
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPML 169 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~ 169 (300)
-+|++++|+++++.++|++.. ...+|+.-.+-|+|||++++........
T Consensus 88 ~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~~gG~l~~~~~~~~~~--------- 136 (230)
T 3cc8_A 88 PYEEEQFDCVIFGDVLEHLFD----------------------PWAVIEKVKPYIKQNGVILASIPNVSHI--------- 136 (230)
T ss_dssp CSCTTCEEEEEEESCGGGSSC----------------------HHHHHHHTGGGEEEEEEEEEEEECTTSH---------
T ss_pred CCCCCccCEEEECChhhhcCC----------------------HHHHHHHHHHHcCCCCEEEEEeCCcchH---------
Confidence 367889999999999999654 3467888889999999999988654321
Q ss_pred HHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec
Q 045960 170 MVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS 223 (300)
Q Consensus 170 ~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~ 223 (300)
..+..+. .+.+..............+.+.+|++.++++.| |++.+++.+...
T Consensus 137 ~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~~~~ 188 (230)
T 3cc8_A 137 SVLAPLL-AGNWTYTEYGLLDKTHIRFFTFNEMLRMFLKAG-YSISKVDRVYVD 188 (230)
T ss_dssp HHHHHHH-TTCCCCBSSSTTBTTCCCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred HHHHHHh-cCCceeccCCCCCcceEEEecHHHHHHHHHHcC-CeEEEEEecccC
Confidence 1122222 222221111111012345679999999999999 999888877544
No 32
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=98.63 E-value=4.5e-07 Score=79.24 Aligned_cols=146 Identities=16% Similarity=0.173 Sum_probs=91.8
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..+..+... + .+|+.-|+-. +.-... +..... .++ ..
T Consensus 55 ~~vLDiG~G~G~~~~~l~~~------------~-----~~v~~vD~s~-~~~~~a-----------~~~~~~-~~~--~~ 102 (242)
T 3l8d_A 55 AEVLDVGCGDGYGTYKLSRT------------G-----YKAVGVDISE-VMIQKG-----------KERGEG-PDL--SF 102 (242)
T ss_dssp CEEEEETCTTSHHHHHHHHT------------T-----CEEEEEESCH-HHHHHH-----------HTTTCB-TTE--EE
T ss_pred CeEEEEcCCCCHHHHHHHHc------------C-----CeEEEEECCH-HHHHHH-----------Hhhccc-CCc--eE
Confidence 37999999999887654431 1 3566666421 111111 111110 122 12
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+-+.+..--+|++++|+|+++.++||+.. ...+|+.-.+-|+|||++++...+.....
T Consensus 103 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~~~ 160 (242)
T 3l8d_A 103 IKGDLSSLPFENEQFEAIMAINSLEWTEE----------------------PLRALNEIKRVLKSDGYACIAILGPTAKP 160 (242)
T ss_dssp EECBTTBCSSCTTCEEEEEEESCTTSSSC----------------------HHHHHHHHHHHEEEEEEEEEEEECTTCGG
T ss_pred EEcchhcCCCCCCCccEEEEcChHhhccC----------------------HHHHHHHHHHHhCCCeEEEEEEcCCcchh
Confidence 33444444578999999999999999643 45677888899999999999987654321
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
. ...+ ...... .......++++++.++++.| |++.+.+.+
T Consensus 161 ~------~~~~-----------~~~~~~-~~~~~~~~~~~~~~~l~~~G-f~~~~~~~~ 200 (242)
T 3l8d_A 161 R------ENSY-----------PRLYGK-DVVCNTMMPWEFEQLVKEQG-FKVVDGIGV 200 (242)
T ss_dssp G------GGGG-----------GGGGTC-CCSSCCCCHHHHHHHHHHTT-EEEEEEEEE
T ss_pred h------hhhh-----------hhhccc-cccccCCCHHHHHHHHHHcC-CEEEEeecc
Confidence 0 0000 011222 34566789999999999999 999887755
No 33
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=98.57 E-value=1.2e-06 Score=78.32 Aligned_cols=148 Identities=14% Similarity=0.086 Sum_probs=92.4
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..+..+.. +..+|+..|+-. .. +... ... .+ +..
T Consensus 36 ~~vLDiGcG~G~~~~~l~~-----------------~~~~v~gvD~s~----~~----------~~~a-~~~-~~--~~~ 80 (261)
T 3ege_A 36 SVIADIGAGTGGYSVALAN-----------------QGLFVYAVEPSI----VM----------RQQA-VVH-PQ--VEW 80 (261)
T ss_dssp CEEEEETCTTSHHHHHHHT-----------------TTCEEEEECSCH----HH----------HHSS-CCC-TT--EEE
T ss_pred CEEEEEcCcccHHHHHHHh-----------------CCCEEEEEeCCH----HH----------HHHH-Hhc-cC--CEE
Confidence 3799999999998765431 236778877532 00 0000 000 11 122
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+-+.+..--+|++++|+|+++.++||+.+ +..+|+.-.+-|| ||++++.........
T Consensus 81 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~Lk-gG~~~~~~~~~~~~~ 137 (261)
T 3ege_A 81 FTGYAENLALPDKSVDGVISILAIHHFSH----------------------LEKSFQEMQRIIR-DGTIVLLTFDIRLAQ 137 (261)
T ss_dssp ECCCTTSCCSCTTCBSEEEEESCGGGCSS----------------------HHHHHHHHHHHBC-SSCEEEEEECGGGCC
T ss_pred EECchhhCCCCCCCEeEEEEcchHhhccC----------------------HHHHHHHHHHHhC-CcEEEEEEcCCchhH
Confidence 33455444478899999999999999643 6678888889999 998888876543322
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeeccc
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVSWL 225 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~~~ 225 (300)
... +...+.++. . ....++++.+++. ++++.| |++.+.+.+..++.
T Consensus 138 ~~~---~~~~~~~~~----------~---~~~~~~~~~~~~~-~l~~aG-F~~v~~~~~~~p~~ 183 (261)
T 3ege_A 138 RIW---LYDYFPFLW----------E---DALRFLPLDEQIN-LLQENT-KRRVEAIPFLLPHD 183 (261)
T ss_dssp CCG---GGGTCHHHH----------H---HHHTSCCHHHHHH-HHHHHH-CSEEEEEECCEETT
T ss_pred HHH---HHHHHHHHh----------h---hhhhhCCCHHHHH-HHHHcC-CCceeEEEecCCCc
Confidence 111 111111110 0 1113467789999 999999 99988888877643
No 34
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=98.56 E-value=1.2e-06 Score=76.00 Aligned_cols=91 Identities=16% Similarity=0.180 Sum_probs=64.8
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHH
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLM 170 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~ 170 (300)
+|++++|+++++.+|||+.. ...+|+.-.+-|+|||++++....... ....
T Consensus 98 ~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~-------~~~~ 148 (219)
T 1vlm_A 98 LKDESFDFALMVTTICFVDD----------------------PERALKEAYRILKKGGYLIVGIVDRES-------FLGR 148 (219)
T ss_dssp SCTTCEEEEEEESCGGGSSC----------------------HHHHHHHHHHHEEEEEEEEEEEECSSS-------HHHH
T ss_pred CCCCCeeEEEEcchHhhccC----------------------HHHHHHHHHHHcCCCcEEEEEEeCCcc-------HHHH
Confidence 67789999999999999643 456777778889999999998865432 1222
Q ss_pred HHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 171 VLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 171 al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
.+... ..| ..+ .-...+++.+|++.++++.| |++.++...
T Consensus 149 ~~~~~-~~~-------~~~-~~~~~~~~~~~l~~~l~~~G-f~~~~~~~~ 188 (219)
T 1vlm_A 149 EYEKN-KEK-------SVF-YKNARFFSTEELMDLMRKAG-FEEFKVVQT 188 (219)
T ss_dssp HHHHT-TTC--------CC-STTCCCCCHHHHHHHHHHTT-CEEEEEEEE
T ss_pred HHHHH-hcC-------cch-hcccccCCHHHHHHHHHHCC-CeEEEEecc
Confidence 22221 111 233 34556789999999999999 998877655
No 35
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=98.56 E-value=5.2e-07 Score=79.37 Aligned_cols=90 Identities=18% Similarity=0.183 Sum_probs=65.8
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHH
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPML 169 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~ 169 (300)
-+|++++|+|+|+.++||+.. .|+..+|+.-.+-|+|||++++...+... +.
T Consensus 96 ~~~~~~fD~i~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~--------~~ 147 (240)
T 3dli_A 96 SLPDKYLDGVMISHFVEHLDP--------------------ERLFELLSLCYSKMKYSSYIVIESPNPTS--------LY 147 (240)
T ss_dssp TSCTTCBSEEEEESCGGGSCG--------------------GGHHHHHHHHHHHBCTTCCEEEEEECTTS--------HH
T ss_pred hcCCCCeeEEEECCchhhCCc--------------------HHHHHHHHHHHHHcCCCcEEEEEeCCcch--------hH
Confidence 468899999999999999653 24678888899999999999998875332 11
Q ss_pred HHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 170 MVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 170 ~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
. +.+. . .. .--.+.++.++++.++++.| |++.+++.+.
T Consensus 148 ~-~~~~----------~-~~-~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~ 185 (240)
T 3dli_A 148 S-LINF----------Y-ID-PTHKKPVHPETLKFILEYLG-FRDVKIEFFE 185 (240)
T ss_dssp H-HHHH----------T-TS-TTCCSCCCHHHHHHHHHHHT-CEEEEEEEEC
T ss_pred H-HHHH----------h-cC-ccccccCCHHHHHHHHHHCC-CeEEEEEEec
Confidence 1 1110 0 11 12235678899999999999 9988888774
No 36
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=98.54 E-value=4.3e-06 Score=74.55 Aligned_cols=167 Identities=10% Similarity=0.002 Sum_probs=92.3
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCc-----hHHHhhcChhhHHHHhhhcCCCCCc
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSD-----FNTVFKSLPSFYERLRTEKGHEFGS 76 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~ND-----Fn~Lf~~l~~~~~~~~~~~~~~~~~ 76 (300)
-+|.|+||++|..++.+.... + |..+|+.-|+-.+. .-...+ ..+.. .+.. .+
T Consensus 45 ~~vLDiGcG~G~~~~~l~~~~-----------g---~~~~v~gvD~s~~~~~~~~~~~~a~------~~~~~-~~~~-~~ 102 (275)
T 3bkx_A 45 EKILEIGCGQGDLSAVLADQV-----------G---SSGHVTGIDIASPDYGAPLTLGQAW------NHLLA-GPLG-DR 102 (275)
T ss_dssp CEEEEESCTTSHHHHHHHHHH-----------C---TTCEEEEECSSCTTCCSSSCHHHHH------HHHHT-STTG-GG
T ss_pred CEEEEeCCCCCHHHHHHHHHh-----------C---CCCEEEEEECCccccccHHHHHHHH------HHHHh-cCCC-Cc
Confidence 379999999998887553321 1 34678888865542 111211 11111 0100 12
Q ss_pred eeeeecCCc-cccc--cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEE
Q 045960 77 CFVAASPGS-FYTR--LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLT 153 (300)
Q Consensus 77 ~f~~~vpgS-Fy~~--l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~ 153 (300)
+- .+.+. +... -+|++++|+|+|+.++|++.. ...+++...+=++|||++++.
T Consensus 103 v~--~~~~d~~~~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~~~~~~~l~~~gG~l~~~ 158 (275)
T 3bkx_A 103 LT--VHFNTNLSDDLGPIADQHFDRVVLAHSLWYFAS----------------------ANALALLFKNMAAVCDHVDVA 158 (275)
T ss_dssp EE--EECSCCTTTCCGGGTTCCCSEEEEESCGGGSSC----------------------HHHHHHHHHHHTTTCSEEEEE
T ss_pred eE--EEECChhhhccCCCCCCCEEEEEEccchhhCCC----------------------HHHHHHHHHHHhCCCCEEEEE
Confidence 21 23333 3322 256889999999999999654 123444444445569999998
Q ss_pred EeecCCCCCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 154 LLYNDNFHATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 154 ~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
-.......+ ......+..+..... ..-..+.. ......+|++++++++++.| |++.+.+.+
T Consensus 159 ~~~~~~~~~---~~~~~~~~~~~~~~~-~~~~~~~~-~~~~~~~s~~~l~~~l~~aG-f~~~~~~~~ 219 (275)
T 3bkx_A 159 EWSMQPTAL---DQIGHLQAAMIQGLL-YAIAPSDV-ANIRTLITPDTLAQIAHDNT-WTYTAGTIV 219 (275)
T ss_dssp EECSSCSSG---GGHHHHHHHHHHHHH-HHHSCCTT-CSCCCCCCHHHHHHHHHHHT-CEEEECCCB
T ss_pred EecCCCCch---hhhhHHHHHHHHHHH-hhcccccc-ccccccCCHHHHHHHHHHCC-CeeEEEEEe
Confidence 876654322 111222221111110 00001122 34446799999999999999 999887766
No 37
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=98.54 E-value=9.6e-07 Score=81.04 Aligned_cols=100 Identities=16% Similarity=0.216 Sum_probs=67.3
Q ss_pred CCcccEEEeccccccc-cCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHH
Q 045960 93 HNFLDFVYSSYALHWL-SRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMV 171 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWL-S~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~a 171 (300)
++++|+|+|+.++||+ .. ..|...+|+.-++-|+|||+++++.++.. .+...
T Consensus 112 ~~~fD~V~~~~~l~~~~~~-------------------~~~~~~~l~~~~~~LkpgG~li~~~~~~~--------~l~~~ 164 (313)
T 3bgv_A 112 QMCFDICSCQFVCHYSFES-------------------YEQADMMLRNACERLSPGGYFIGTTPNSF--------ELIRR 164 (313)
T ss_dssp TCCEEEEEEETCGGGGGGS-------------------HHHHHHHHHHHHTTEEEEEEEEEEEECHH--------HHHHH
T ss_pred CCCEEEEEEecchhhccCC-------------------HHHHHHHHHHHHHHhCCCcEEEEecCChH--------HHHHH
Confidence 4599999999999997 44 23567888889999999999999987652 12233
Q ss_pred HHHHHHc--C-------CCchhhh------------ccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 172 LKDMISE--G-------LAEESKV------------KSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 172 l~~mv~e--G-------~i~~e~~------------d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
|...-.. | ..+.+++ ... ..|.|..+.+++.+++++.| |++...+.+.
T Consensus 165 ~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~f~l~~~~-~~~~~~~~~~~~~~l~~~~G-~~~v~~~~f~ 233 (313)
T 3bgv_A 165 LEASETESFGNEIYTVKFQKKGDYPLFGCKYDFNLEGVV-DVPEFLVYFPLLNEMAKKYN-MKLVYKKTFL 233 (313)
T ss_dssp HTTSSSSEEECSSEEEEESCSSCCCSSCCEEEEEEC----CCEEECCCHHHHHHHGGGGT-EEEEEEEEHH
T ss_pred HHhhccCccCCeeEEEEeCCCCCCCCccceEEEEECCcc-cCcceEEcHHHHHHHHHHcC-cEEEEecCHH
Confidence 3221000 0 0011111 233 46778889999999999999 8888776553
No 38
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=98.54 E-value=2e-06 Score=77.26 Aligned_cols=106 Identities=17% Similarity=0.225 Sum_probs=69.2
Q ss_pred CccccccC-CCCcccEEEeccccccc-cCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 84 GSFYTRLF-PHNFLDFVYSSYALHWL-SRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 84 gSFy~~l~-P~~sv~~~~Ss~alHWL-S~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.+..--+ |++++|+|+++.++||+ .. ..|...+|+.-++-|+|||++++......
T Consensus 121 ~d~~~~~~~~~~~fD~v~~~~~l~~~~~~-------------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~--- 178 (298)
T 1ri5_A 121 QDSYGRHMDLGKEFDVISSQFSFHYAFST-------------------SESLDIAQRNIARHLRPGGYFIMTVPSRD--- 178 (298)
T ss_dssp SCTTTSCCCCSSCEEEEEEESCGGGGGSS-------------------HHHHHHHHHHHHHTEEEEEEEEEEEECHH---
T ss_pred CCccccccCCCCCcCEEEECchhhhhcCC-------------------HHHHHHHHHHHHHhcCCCCEEEEEECCHH---
Confidence 34444334 68899999999999995 22 34577888889999999999999886442
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhh-----------------------ccccCCCcccCCHHHHHHHHHhcCCeeEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKV-----------------------KSFEDFPIYRASVDEVKQIVKKEGSFDIQEVE 218 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~-----------------------d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e 218 (300)
.+...+. .. .+..... +.....|.++.+++|++.++++.| |++.+.+
T Consensus 179 -----~~~~~~~---~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~l~~ll~~aG-f~~v~~~ 248 (298)
T 1ri5_A 179 -----VILERYK---QG-RMSNDFYKIELEKMEDVPMESVREYRFTLLDSVNNCIEYFVDFTRMVDGFKRLG-LSLVERK 248 (298)
T ss_dssp -----HHHHHHH---HT-CCBCSSEEEECCCCSSCCTTTCCEEEEEETTSCSSEEEECCCHHHHHHHHHTTT-EEEEEEE
T ss_pred -----HHHHHHc---cC-ccCCeeEEEEeCccccccccccceEEEEEchhhcCCcccccCHHHHHHHHHHcC-CEEEEec
Confidence 1111111 11 1110000 011023346789999999999999 9988876
Q ss_pred EEe
Q 045960 219 TFN 221 (300)
Q Consensus 219 ~~~ 221 (300)
.+.
T Consensus 249 ~~~ 251 (298)
T 1ri5_A 249 GFI 251 (298)
T ss_dssp EHH
T ss_pred CHH
Confidence 653
No 39
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=98.53 E-value=3.5e-07 Score=78.57 Aligned_cols=93 Identities=15% Similarity=0.208 Sum_probs=63.0
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHH
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLM 170 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~ 170 (300)
.+.+++|+|+++.++| ... ...+|+.-.+-|+|||++++............ +
T Consensus 112 ~~~~~fD~v~~~~~l~-~~~----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~---~-- 163 (227)
T 3e8s_A 112 PVGKDYDLICANFALL-HQD----------------------IIELLSAMRTLLVPGGALVIQTLHPWSVADGD---Y-- 163 (227)
T ss_dssp CCCCCEEEEEEESCCC-SSC----------------------CHHHHHHHHHTEEEEEEEEEEECCTTTTCTTC---C--
T ss_pred ccCCCccEEEECchhh-hhh----------------------HHHHHHHHHHHhCCCeEEEEEecCccccCccc---c--
Confidence 4455699999999999 222 35677778889999999999887654321100 0
Q ss_pred HHHHHHHcCCCchhhhccc----cCCCcccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 171 VLKDMISEGLAEESKVKSF----EDFPIYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 171 al~~mv~eG~i~~e~~d~f----~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
..+ +..+.+..+ ...+.++++.+|++.+++++| |++.+++.
T Consensus 164 ------~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aG-f~~~~~~~ 208 (227)
T 3e8s_A 164 ------QDG-WREESFAGFAGDWQPMPWYFRTLASWLNALDMAG-LRLVSLQE 208 (227)
T ss_dssp ------SCE-EEEECCTTSSSCCCCEEEEECCHHHHHHHHHHTT-EEEEEEEC
T ss_pred ------ccc-cchhhhhccccCcccceEEEecHHHHHHHHHHcC-CeEEEEec
Confidence 011 111112221 036678899999999999999 99988776
No 40
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=98.51 E-value=4.5e-07 Score=79.78 Aligned_cols=93 Identities=16% Similarity=0.215 Sum_probs=67.3
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
.+.+..--+|++++|+|+++.+||+++. .|...+|+.-.+-|+|||++++.........
T Consensus 146 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~- 204 (254)
T 1xtp_A 146 LASMETATLPPNTYDLIVIQWTAIYLTD--------------------ADFVKFFKHCQQALTPNGYIFFKENCSTGDR- 204 (254)
T ss_dssp ESCGGGCCCCSSCEEEEEEESCGGGSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEEEBC--CC-
T ss_pred EccHHHCCCCCCCeEEEEEcchhhhCCH--------------------HHHHHHHHHHHHhcCCCeEEEEEecCCCccc-
Confidence 3445444467899999999999999532 3577888888999999999999875322110
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
. .... ..+.+.++.+++++++++.| |++.+++..
T Consensus 205 -----------------~-----~~~~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 238 (254)
T 1xtp_A 205 -----------------F-----LVDK-EDSSLTRSDIHYKRLFNESG-VRVVKEAFQ 238 (254)
T ss_dssp -----------------E-----EEET-TTTEEEBCHHHHHHHHHHHT-CCEEEEEEC
T ss_pred -----------------c-----eecc-cCCcccCCHHHHHHHHHHCC-CEEEEeeec
Confidence 0 1112 34456789999999999999 998887654
No 41
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=98.51 E-value=1.2e-06 Score=74.80 Aligned_cols=157 Identities=11% Similarity=0.111 Sum_probs=88.4
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..+..+... +..+|+.-|+-.. . +......... .+.. .++ ..+
T Consensus 46 ~vLdiG~G~G~~~~~l~~~----------------~~~~v~~~D~s~~----~---~~~a~~~~~~-~~~~-~~~--~~~ 98 (219)
T 3dlc_A 46 TCIDIGSGPGALSIALAKQ----------------SDFSIRALDFSKH----M---NEIALKNIAD-ANLN-DRI--QIV 98 (219)
T ss_dssp EEEEETCTTSHHHHHHHHH----------------SEEEEEEEESCHH----H---HHHHHHHHHH-TTCT-TTE--EEE
T ss_pred EEEEECCCCCHHHHHHHHc----------------CCCeEEEEECCHH----H---HHHHHHHHHh-cccc-Cce--EEE
Confidence 7999999999877654421 2367777775211 0 0111111111 1110 122 123
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
-+.+..--+|++++|+|+++.++||+.. ...+|+.-.+-|+|||++++...-..
T Consensus 99 ~~d~~~~~~~~~~~D~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~---- 152 (219)
T 3dlc_A 99 QGDVHNIPIEDNYADLIVSRGSVFFWED----------------------VATAFREIYRILKSGGKTYIGGGFGN---- 152 (219)
T ss_dssp ECBTTBCSSCTTCEEEEEEESCGGGCSC----------------------HHHHHHHHHHHEEEEEEEEEEECCSS----
T ss_pred EcCHHHCCCCcccccEEEECchHhhccC----------------------HHHHHHHHHHhCCCCCEEEEEeccCc----
Confidence 3445444478999999999999999633 46678888899999999988752221
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhcc-ccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKS-FEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~-f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
..+...+........ ..+.. + .-....++.+|++.++++.| |++.++...
T Consensus 153 ---~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~~~~~~~~~l~~aG-f~~v~~~~~ 203 (219)
T 3dlc_A 153 ---KELRDSISAEMIRKN---PDWKEFN-RKNISQENVERFQNVLDEIG-ISSYEIILG 203 (219)
T ss_dssp ---HHHHHHHHHHHHHHC---TTHHHHH-HHHSSHHHHHHHHHHHHHHT-CSSEEEEEE
T ss_pred ---HHHHHHHHHHHHHhH---HHHHhhh-hhccccCCHHHHHHHHHHcC-CCeEEEEec
Confidence 112222221111110 01111 1 11123348899999999999 877665533
No 42
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=98.51 E-value=6.1e-08 Score=85.79 Aligned_cols=113 Identities=20% Similarity=0.233 Sum_probs=68.0
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
.+++..--+|++++|+|+++.++||+.. ...+|+.-.+-|+|||++++..........
T Consensus 96 ~~d~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 153 (253)
T 3g5l_A 96 QKAIEDIAIEPDAYNVVLSSLALHYIAS----------------------FDDICKKVYINLKSSGSFIFSVEHPVFTAD 153 (253)
T ss_dssp ECCGGGCCCCTTCEEEEEEESCGGGCSC----------------------HHHHHHHHHHHEEEEEEEEEEEECHHHHSS
T ss_pred EcchhhCCCCCCCeEEEEEchhhhhhhh----------------------HHHHHHHHHHHcCCCcEEEEEeCCCccccC
Confidence 3445444478899999999999999743 567888888999999999998653210000
Q ss_pred C------C--chHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 163 T------P--GEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 163 ~------~--~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
. . +..+...+.....++.... .+..- ....|.+|.+|++++++++| |++.+++..
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~-~~~~~~~t~~~~~~~l~~aG-F~~~~~~e~ 216 (253)
T 3g5l_A 154 GRQDWYTDETGNKLHWPVDRYFNESMRTS-HFLGE-DVQKYHRTVTTYIQTLLKNG-FQINSVIEP 216 (253)
T ss_dssp SSCSCEECSSCCEEEEEECCTTCCCEEEE-EETTE-EEEEECCCHHHHHHHHHHTT-EEEEEEECC
T ss_pred ccccceeccCCceEEEEeccccccceEEE-eeccc-cCccEecCHHHHHHHHHHcC-CeeeeeecC
Confidence 0 0 0000000000001111000 00111 24456779999999999999 999887654
No 43
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=98.50 E-value=3.5e-07 Score=78.64 Aligned_cols=86 Identities=15% Similarity=0.134 Sum_probs=66.0
Q ss_pred CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHH
Q 045960 92 PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMV 171 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~a 171 (300)
+++++|+|+++.+||++.. .|+..+|+.-++-|+|||++++.+......
T Consensus 99 ~~~~fD~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~----------- 147 (211)
T 3e23_A 99 AIDAYDAVWAHACLLHVPR--------------------DELADVLKLIWRALKPGGLFYASYKSGEGE----------- 147 (211)
T ss_dssp CCSCEEEEEECSCGGGSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEEECCSSC-----------
T ss_pred CCCcEEEEEecCchhhcCH--------------------HHHHHHHHHHHHhcCCCcEEEEEEcCCCcc-----------
Confidence 8899999999999999542 357788898999999999999987533321
Q ss_pred HHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEee
Q 045960 172 LKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNV 222 (300)
Q Consensus 172 l~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~ 222 (300)
..+.+ ...+.+++.+++++++++.|-|++.+++....
T Consensus 148 -------------~~~~~-~~~~~~~~~~~~~~~l~~aG~f~~~~~~~~~~ 184 (211)
T 3e23_A 148 -------------GRDKL-ARYYNYPSEEWLRARYAEAGTWASVAVESSEG 184 (211)
T ss_dssp -------------EECTT-SCEECCCCHHHHHHHHHHHCCCSEEEEEEEEE
T ss_pred -------------ccccc-chhccCCCHHHHHHHHHhCCCcEEEEEEeccC
Confidence 01233 44456789999999999997688888776643
No 44
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=98.49 E-value=3.3e-06 Score=77.47 Aligned_cols=95 Identities=9% Similarity=0.019 Sum_probs=67.2
Q ss_pred CccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC-C
Q 045960 84 GSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH-A 162 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~-~ 162 (300)
+.+..--+|++++|+|+++.++||+ . ...+|+.-.+-|+|||++++......+.. .
T Consensus 174 ~d~~~~~~~~~~fD~V~~~~~l~~~-~----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~ 230 (312)
T 3vc1_A 174 CNMLDTPFDKGAVTASWNNESTMYV-D----------------------LHDLFSEHSRFLKVGGRYVTITGCWNPRYGQ 230 (312)
T ss_dssp CCTTSCCCCTTCEEEEEEESCGGGS-C----------------------HHHHHHHHHHHEEEEEEEEEEEEEECTTTCS
T ss_pred CChhcCCCCCCCEeEEEECCchhhC-C----------------------HHHHHHHHHHHcCCCcEEEEEEccccccccc
Confidence 4444434788999999999999996 2 36677888899999999999887665432 1
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
.. ..+..+ +.. ..| ..++.+++++++++.| |++.+++.+
T Consensus 231 ~~-----~~~~~~-----------~~~-~~~-~~~s~~~~~~~l~~aG-f~~~~~~~~ 269 (312)
T 3vc1_A 231 PS-----KWVSQI-----------NAH-FEC-NIHSRREYLRAMADNR-LVPHTIVDL 269 (312)
T ss_dssp CC-----HHHHHH-----------HHH-HTC-CCCBHHHHHHHHHTTT-EEEEEEEEC
T ss_pred hh-----HHHHHH-----------Hhh-hcC-CCCCHHHHHHHHHHCC-CEEEEEEeC
Confidence 11 111111 111 122 4778999999999999 998888765
No 45
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=98.47 E-value=1.6e-06 Score=78.58 Aligned_cols=66 Identities=11% Similarity=0.140 Sum_probs=47.4
Q ss_pred CccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCC
Q 045960 84 GSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHAT 163 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~ 163 (300)
+++-.--+|++|+|+|+++.++||+. ...+|+.-++-|||||+|++...+.....
T Consensus 88 ~~~e~~~~~~~sfD~v~~~~~~h~~~-----------------------~~~~~~e~~rvLkpgG~l~~~~~~~~~~~-- 142 (257)
T 4hg2_A 88 APAEDTGLPPASVDVAIAAQAMHWFD-----------------------LDRFWAELRRVARPGAVFAAVTYGLTRVD-- 142 (257)
T ss_dssp CCTTCCCCCSSCEEEEEECSCCTTCC-----------------------HHHHHHHHHHHEEEEEEEEEEEECCCBCC--
T ss_pred hhhhhhcccCCcccEEEEeeehhHhh-----------------------HHHHHHHHHHHcCCCCEEEEEECCCCCCC--
Confidence 44444458999999999999999953 24566677788999999998887665433
Q ss_pred CchHHHHHHHHHH
Q 045960 164 PGEPMLMVLKDMI 176 (300)
Q Consensus 164 ~~~~l~~al~~mv 176 (300)
..+...++++.
T Consensus 143 --~~~~~~~~~~~ 153 (257)
T 4hg2_A 143 --PEVDAVVDRLY 153 (257)
T ss_dssp --HHHHHHHHHHH
T ss_pred --HHHHHHHHHHH
Confidence 33455555543
No 46
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.45 E-value=7.7e-07 Score=83.30 Aligned_cols=150 Identities=19% Similarity=0.150 Sum_probs=92.8
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|+|+||++|..+..+... .|..+++.-|+|. ... ... ... .+. ..+ +.-
T Consensus 186 ~~vLDvG~G~G~~~~~l~~~---------------~p~~~~~~~D~~~-----~~~--~~~---~~~-~~~-~~~--v~~ 236 (348)
T 3lst_A 186 GTVADVGGGRGGFLLTVLRE---------------HPGLQGVLLDRAE-----VVA--RHR---LDA-PDV-AGR--WKV 236 (348)
T ss_dssp EEEEEETCTTSHHHHHHHHH---------------CTTEEEEEEECHH-----HHT--TCC---CCC-GGG-TTS--EEE
T ss_pred ceEEEECCccCHHHHHHHHH---------------CCCCEEEEecCHH-----Hhh--ccc---ccc-cCC-CCC--eEE
Confidence 37999999999877654431 1457888888852 221 000 000 000 011 334
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.|+|+ .-+| ++|+++++.+||..++ .+...+|+.-++-|+|||++++.-...++..
T Consensus 237 ~~~d~~-~~~p--~~D~v~~~~vlh~~~d--------------------~~~~~~L~~~~~~LkpgG~l~i~e~~~~~~~ 293 (348)
T 3lst_A 237 VEGDFL-REVP--HADVHVLKRILHNWGD--------------------EDSVRILTNCRRVMPAHGRVLVIDAVVPEGN 293 (348)
T ss_dssp EECCTT-TCCC--CCSEEEEESCGGGSCH--------------------HHHHHHHHHHHHTCCTTCEEEEEECCBCSSS
T ss_pred EecCCC-CCCC--CCcEEEEehhccCCCH--------------------HHHHHHHHHHHHhcCCCCEEEEEEeccCCCC
Confidence 678888 5567 9999999999997333 2346788889999999999988754443322
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
... . ..+.++..-. ...-..++.+|++++++++| |++.++..
T Consensus 294 ~~~---~-~~~~d~~~~~-----------~~~~~~~t~~e~~~ll~~aG-f~~~~~~~ 335 (348)
T 3lst_A 294 DAH---Q-SKEMDFMMLA-----------ARTGQERTAAELEPLFTAAG-LRLDRVVG 335 (348)
T ss_dssp SCC---H-HHHHHHHHHH-----------TTSCCCCBHHHHHHHHHHTT-EEEEEEEE
T ss_pred Ccc---h-hhhcChhhhh-----------cCCCcCCCHHHHHHHHHHCC-CceEEEEE
Confidence 111 1 1122211100 11223578999999999999 99887764
No 47
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.43 E-value=4.2e-06 Score=79.15 Aligned_cols=151 Identities=17% Similarity=0.250 Sum_probs=93.4
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|+|+||++|..+..+... -|.++++.-|+|. ....... .++ +.-
T Consensus 205 ~~vlDvG~G~G~~~~~l~~~---------------~p~~~~~~~D~~~-----~~~~a~~------------~~~--v~~ 250 (368)
T 3reo_A 205 TTIVDVGGGTGAVASMIVAK---------------YPSINAINFDLPH-----VIQDAPA------------FSG--VEH 250 (368)
T ss_dssp SEEEEETCTTSHHHHHHHHH---------------CTTCEEEEEECHH-----HHTTCCC------------CTT--EEE
T ss_pred CEEEEeCCCcCHHHHHHHHh---------------CCCCEEEEEehHH-----HHHhhhh------------cCC--CEE
Confidence 37999999999877654431 2457888888742 2211111 022 334
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.|+|+. -+|.. |+++++++||+++. .+...+|+.-++-|+|||++++.=.-.++..
T Consensus 251 ~~~d~~~-~~p~~--D~v~~~~vlh~~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~ 307 (368)
T 3reo_A 251 LGGDMFD-GVPKG--DAIFIKWICHDWSD--------------------EHCLKLLKNCYAALPDHGKVIVAEYILPPSP 307 (368)
T ss_dssp EECCTTT-CCCCC--SEEEEESCGGGBCH--------------------HHHHHHHHHHHHHSCTTCEEEEEECCCCSSC
T ss_pred EecCCCC-CCCCC--CEEEEechhhcCCH--------------------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCC
Confidence 6788887 57865 99999999996432 2456788888999999999988754333221
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
......-...+.++..-. . ...-..++.+|++++++++| |++.++...
T Consensus 308 ~~~~~~~~~~~~d~~~~~---------~-~~~g~~rt~~e~~~ll~~AG-F~~v~~~~~ 355 (368)
T 3reo_A 308 DPSIATKVVIHTDALMLA---------Y-NPGGKERTEKEFQALAMASG-FRGFKVASC 355 (368)
T ss_dssp CCCHHHHHHHHHHHHHHH---------H-SSBCCCCCHHHHHHHHHHTT-CCEEEEEEE
T ss_pred CCchhhhHHHhhhHHHHh---------h-cCCCccCCHHHHHHHHHHCC-CeeeEEEEe
Confidence 111000011122221110 0 11234578999999999999 998777655
No 48
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=98.43 E-value=8.9e-07 Score=77.08 Aligned_cols=106 Identities=14% Similarity=0.213 Sum_probs=65.9
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..+..+... + .+|+.-|.-.+--.. ....... .+. + +..
T Consensus 39 ~~vLdiG~G~G~~~~~l~~~------------~-----~~~~~~D~s~~~~~~-------a~~~~~~-~~~---~--~~~ 88 (246)
T 1y8c_A 39 DDYLDLACGTGNLTENLCPK------------F-----KNTWAVDLSQEMLSE-------AENKFRS-QGL---K--PRL 88 (246)
T ss_dssp TEEEEETCTTSTTHHHHGGG------------S-----SEEEEECSCHHHHHH-------HHHHHHH-TTC---C--CEE
T ss_pred CeEEEeCCCCCHHHHHHHHC------------C-----CcEEEEECCHHHHHH-------HHHHHhh-cCC---C--eEE
Confidence 37999999999988755421 1 356666642111100 0111111 110 1 122
Q ss_pred cCCccccccCCCCcccEEEecc-ccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSY-ALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~-alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
+.+.+..--+| +++|+|+++. +|||+.. ..|...+|+.-++-|+|||++++.+...
T Consensus 89 ~~~d~~~~~~~-~~fD~v~~~~~~l~~~~~-------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 145 (246)
T 1y8c_A 89 ACQDISNLNIN-RKFDLITCCLDSTNYIID-------------------SDDLKKYFKAVSNHLKEGGVFIFDINSY 145 (246)
T ss_dssp ECCCGGGCCCS-CCEEEEEECTTGGGGCCS-------------------HHHHHHHHHHHHTTEEEEEEEEEEEECH
T ss_pred EecccccCCcc-CCceEEEEcCccccccCC-------------------HHHHHHHHHHHHHhcCCCcEEEEEecCH
Confidence 34455443455 8899999999 9999643 3467888999999999999999987643
No 49
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=98.40 E-value=3e-06 Score=77.48 Aligned_cols=162 Identities=10% Similarity=0.053 Sum_probs=92.3
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+.. ...|..+|+.-|+-..=-.. ....... .+.. .+ +..
T Consensus 120 ~~vLDiGcG~G~~~~~la~--------------~~~~~~~v~gvD~s~~~~~~-------a~~~~~~-~~~~-~~--v~~ 174 (305)
T 3ocj_A 120 CVVASVPCGWMSELLALDY--------------SACPGVQLVGIDYDPEALDG-------ATRLAAG-HALA-GQ--ITL 174 (305)
T ss_dssp CEEEETTCTTCHHHHTSCC--------------TTCTTCEEEEEESCHHHHHH-------HHHHHTT-STTG-GG--EEE
T ss_pred CEEEEecCCCCHHHHHHHH--------------hcCCCCeEEEEECCHHHHHH-------HHHHHHh-cCCC-Cc--eEE
Confidence 3799999999988764320 12345677777752110000 0001100 0100 11 222
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.+.+..--+| +++|+|+++.++||+.. ......+|+.-.+-|+|||++++...+++...
T Consensus 175 ~~~d~~~~~~~-~~fD~v~~~~~~~~~~~-------------------~~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 234 (305)
T 3ocj_A 175 HRQDAWKLDTR-EGYDLLTSNGLNIYEPD-------------------DARVTELYRRFWQALKPGGALVTSFLTPPPAL 234 (305)
T ss_dssp EECCGGGCCCC-SCEEEEECCSSGGGCCC-------------------HHHHHHHHHHHHHHEEEEEEEEEECCCCCTTT
T ss_pred EECchhcCCcc-CCeEEEEECChhhhcCC-------------------HHHHHHHHHHHHHhcCCCeEEEEEecCCCCcc
Confidence 44666665566 99999999999999544 12244578888899999999999887665432
Q ss_pred CCC------c--hHHHHHHHHHHHcCCCchhhhccccCCC-cccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 162 ATP------G--EPMLMVLKDMISEGLAEESKVKSFEDFP-IYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 162 ~~~------~--~~l~~al~~mv~eG~i~~e~~d~f~~~P-~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
... . .........+.. +.. .-. ..+++.+|+++.+++.| |++.+++.
T Consensus 235 ~~~~~w~~~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~~~~l~~aG-F~~v~~~~ 290 (305)
T 3ocj_A 235 SPDSPWDMQAIDPHDLQLQQLVFT---------RLI-QPRWNALRTHAQTRAQLEEAG-FTDLRFED 290 (305)
T ss_dssp CTTCCCCGGGSCHHHHHHHHHHHH---------HTT-CCSCCCCCCHHHHHHHHHHTT-CEEEEEEC
T ss_pred cccccceeeccccchhhhhhhHHH---------HHH-hhhhhccCCHHHHHHHHHHCC-CEEEEEEc
Confidence 111 0 000000000001 111 111 14579999999999999 99887775
No 50
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=98.40 E-value=1.8e-06 Score=80.42 Aligned_cols=154 Identities=15% Similarity=0.136 Sum_probs=93.8
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|+|+||++|..+..+.. . .|..+++.-|+|. .-...+. .... .+.. .+ +..
T Consensus 181 ~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~--~~~~a~~------~~~~-~~~~-~~--v~~ 233 (352)
T 3mcz_A 181 RTVIDLAGGHGTYLAQVLR--------R-------HPQLTGQIWDLPT--TRDAARK------TIHA-HDLG-GR--VEF 233 (352)
T ss_dssp CEEEEETCTTCHHHHHHHH--------H-------CTTCEEEEEECGG--GHHHHHH------HHHH-TTCG-GG--EEE
T ss_pred CEEEEeCCCcCHHHHHHHH--------h-------CCCCeEEEEECHH--HHHHHHH------HHHh-cCCC-Cc--eEE
Confidence 4799999999987665442 1 1347778889853 2222221 1111 1100 11 334
Q ss_pred cCCcccccc-CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCC
Q 045960 82 SPGSFYTRL-FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNF 160 (300)
Q Consensus 82 vpgSFy~~l-~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~ 160 (300)
+.|+|...- ++++.+|+++++.+||+++. .+...+|+.-.+-|+|||++++.-...++.
T Consensus 234 ~~~d~~~~~~~~~~~~D~v~~~~vlh~~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (352)
T 3mcz_A 234 FEKNLLDARNFEGGAADVVMLNDCLHYFDA--------------------REAREVIGHAAGLVKPGGALLILTMTMNDD 293 (352)
T ss_dssp EECCTTCGGGGTTCCEEEEEEESCGGGSCH--------------------HHHHHHHHHHHHTEEEEEEEEEEEECCCTT
T ss_pred EeCCcccCcccCCCCccEEEEecccccCCH--------------------HHHHHHHHHHHHHcCCCCEEEEEEeccCCC
Confidence 667777654 35567999999999998533 345778888899999999998876554433
Q ss_pred CCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEE
Q 045960 161 HATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQE 216 (300)
Q Consensus 161 ~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~ 216 (300)
.... ....+.++..-- . ..-...++.+|+++++++.| |++.+
T Consensus 294 ~~~~---~~~~~~~~~~~~---------~-~~~~~~~t~~e~~~ll~~aG-f~~~~ 335 (352)
T 3mcz_A 294 RVTP---ALSADFSLHMMV---------N-TNHGELHPTPWIAGVVRDAG-LAVGE 335 (352)
T ss_dssp SSSS---HHHHHHHHHHHH---------H-STTCCCCCHHHHHHHHHHTT-CEEEE
T ss_pred CCCC---chHHHhhHHHHh---------h-CCCCCcCCHHHHHHHHHHCC-Cceee
Confidence 2111 112222221100 0 01123468999999999999 98877
No 51
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=98.39 E-value=1.6e-06 Score=74.94 Aligned_cols=79 Identities=10% Similarity=0.133 Sum_probs=57.2
Q ss_pred CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHHH
Q 045960 94 NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVLK 173 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al~ 173 (300)
+++|+|++..++|++.. .|...+|+.-++-|||||++++.....+.
T Consensus 100 ~~fD~v~~~~~l~~l~~--------------------~~~~~~l~~~~r~LkpgG~~~l~~~~~~~-------------- 145 (203)
T 1pjz_A 100 GHCAAFYDRAAMIALPA--------------------DMRERYVQHLEALMPQACSGLLITLEYDQ-------------- 145 (203)
T ss_dssp HSEEEEEEESCGGGSCH--------------------HHHHHHHHHHHHHSCSEEEEEEEEESSCS--------------
T ss_pred CCEEEEEECcchhhCCH--------------------HHHHHHHHHHHHHcCCCcEEEEEEEecCc--------------
Confidence 78999999999999532 24567788889999999996655532211
Q ss_pred HHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEee
Q 045960 174 DMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNV 222 (300)
Q Consensus 174 ~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~ 222 (300)
+ .. .-|.|..+.+|++..++. | |++..++....
T Consensus 146 -----~--------~~-~~~~~~~~~~el~~~~~~-g-f~i~~~~~~~~ 178 (203)
T 1pjz_A 146 -----A--------LL-EGPPFSVPQTWLHRVMSG-N-WEVTKVGGQDT 178 (203)
T ss_dssp -----S--------SS-SSCCCCCCHHHHHHTSCS-S-EEEEEEEESSC
T ss_pred -----c--------cc-CCCCCCCCHHHHHHHhcC-C-cEEEEeccccc
Confidence 0 11 223345789999999997 7 99988887654
No 52
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=98.39 E-value=2.9e-06 Score=79.98 Aligned_cols=155 Identities=14% Similarity=0.178 Sum_probs=92.7
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+... .|..+++.-|+|. .-...+ ..... .+.. .+ +.-+
T Consensus 182 ~vlDvG~G~G~~~~~l~~~---------------~p~~~~~~~D~~~--~~~~a~------~~~~~-~~~~-~~--v~~~ 234 (363)
T 3dp7_A 182 RLLDIGGNTGKWATQCVQY---------------NKEVEVTIVDLPQ--QLEMMR------KQTAG-LSGS-ER--IHGH 234 (363)
T ss_dssp EEEEESCTTCHHHHHHHHH---------------STTCEEEEEECHH--HHHHHH------HHHTT-CTTG-GG--EEEE
T ss_pred EEEEeCCCcCHHHHHHHHh---------------CCCCEEEEEeCHH--HHHHHH------HHHHh-cCcc-cc--eEEE
Confidence 7999999999877654421 1457888888752 111111 11111 0100 11 3446
Q ss_pred CCcccccc--CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCC
Q 045960 83 PGSFYTRL--FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNF 160 (300)
Q Consensus 83 pgSFy~~l--~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~ 160 (300)
.|+|+..- +| +++|+++++..||.++. .+...+|+.-++-|+|||++++.=...++.
T Consensus 235 ~~d~~~~~~~~p-~~~D~v~~~~vlh~~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 293 (363)
T 3dp7_A 235 GANLLDRDVPFP-TGFDAVWMSQFLDCFSE--------------------EEVISILTRVAQSIGKDSKVYIMETLWDRQ 293 (363)
T ss_dssp ECCCCSSSCCCC-CCCSEEEEESCSTTSCH--------------------HHHHHHHHHHHHHCCTTCEEEEEECCTTSC
T ss_pred EccccccCCCCC-CCcCEEEEechhhhCCH--------------------HHHHHHHHHHHHhcCCCcEEEEEeeccCCc
Confidence 78888752 67 88999999999985332 245678888889999999998865433322
Q ss_pred CCCCchH--HHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEE
Q 045960 161 HATPGEP--MLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVE 218 (300)
Q Consensus 161 ~~~~~~~--l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e 218 (300)
.... .. +.....+|.. .. ......+|.+|++++++++| |++.++.
T Consensus 294 ~~~~-~~~~~~~~~~~~~~----------~~-~~~~~~~t~~e~~~ll~~AG-f~~v~~~ 340 (363)
T 3dp7_A 294 RYET-ASYCLTQISLYFTA----------MA-NGNSKMFHSDDLIRCIENAG-LEVEEIQ 340 (363)
T ss_dssp SSHH-HHHHHHHHHHHHHH----------SS-CSSCCSCCHHHHHHHHHTTT-EEESCCC
T ss_pred cccc-hhhHHHHhhhhHHh----------hh-CCCCcccCHHHHHHHHHHcC-CeEEEEE
Confidence 1100 11 1111111100 01 22334579999999999999 8876654
No 53
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.38 E-value=2.7e-06 Score=80.07 Aligned_cols=151 Identities=17% Similarity=0.166 Sum_probs=92.2
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+. ++ -|.+.+..-|+|. +- ......... .+ ..+ +..+
T Consensus 182 ~v~DvGgG~G~~~~~l~--------~~-------~p~~~~~~~dlp~-----v~---~~a~~~~~~-~~--~~r--v~~~ 233 (353)
T 4a6d_A 182 LMCDLGGGAGALAKECM--------SL-------YPGCKITVFDIPE-----VV---WTAKQHFSF-QE--EEQ--IDFQ 233 (353)
T ss_dssp EEEEETCTTSHHHHHHH--------HH-------CSSCEEEEEECHH-----HH---HHHHHHSCC-----CCS--EEEE
T ss_pred eEEeeCCCCCHHHHHHH--------Hh-------CCCceeEeccCHH-----HH---HHHHHhhhh-cc--cCc--eeee
Confidence 69999999997655333 22 2567888889874 11 111111111 01 122 4457
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
+|+|+..-.|. .|+++.+..||-.++ .+-..+|+.-++-|+|||++++.=.-.++...
T Consensus 234 ~gD~~~~~~~~--~D~~~~~~vlh~~~d--------------------~~~~~iL~~~~~al~pgg~lli~e~~~~~~~~ 291 (353)
T 4a6d_A 234 EGDFFKDPLPE--ADLYILARVLHDWAD--------------------GKCSHLLERIYHTCKPGGGILVIESLLDEDRR 291 (353)
T ss_dssp ESCTTTSCCCC--CSEEEEESSGGGSCH--------------------HHHHHHHHHHHHHCCTTCEEEEEECCCCTTSC
T ss_pred cCccccCCCCC--ceEEEeeeecccCCH--------------------HHHHHHHHHHHhhCCCCCEEEEEEeeeCCCCC
Confidence 89999875554 599999999994222 23467888889999999999886433332211
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEE
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVE 218 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e 218 (300)
.. ....+.+|.-- . ...--.||.+|++++++++| |++.++.
T Consensus 292 ~~---~~~~~~dl~ml----------~-~~~g~ert~~e~~~ll~~AG-f~~v~v~ 332 (353)
T 4a6d_A 292 GP---LLTQLYSLNML----------V-QTEGQERTPTHYHMLLSSAG-FRDFQFK 332 (353)
T ss_dssp CC---HHHHHHHHHHH----------H-SSSCCCCCHHHHHHHHHHHT-CEEEEEE
T ss_pred CC---HHHHHHHHHHH----------H-hCCCcCCCHHHHHHHHHHCC-CceEEEE
Confidence 11 12222222100 0 12234589999999999999 9887764
No 54
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.38 E-value=4.7e-06 Score=78.76 Aligned_cols=151 Identities=20% Similarity=0.215 Sum_probs=93.6
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|+|+||++|..+..+.. . .|.++++.-|+|. ....... .++ +.-
T Consensus 203 ~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~-----~~~~a~~------------~~~--v~~ 248 (364)
T 3p9c_A 203 GTLVDVGGGVGATVAAIAA--------H-------YPTIKGVNFDLPH-----VISEAPQ------------FPG--VTH 248 (364)
T ss_dssp SEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECHH-----HHTTCCC------------CTT--EEE
T ss_pred CEEEEeCCCCCHHHHHHHH--------H-------CCCCeEEEecCHH-----HHHhhhh------------cCC--eEE
Confidence 3799999999987664432 1 2457788888752 2221111 022 334
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.|+|+. -+|.. |+++++++||..+. +|...+|+.-++-|+|||++++.=...++..
T Consensus 249 ~~~D~~~-~~p~~--D~v~~~~vlh~~~d--------------------~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~ 305 (364)
T 3p9c_A 249 VGGDMFK-EVPSG--DTILMKWILHDWSD--------------------QHCATLLKNCYDALPAHGKVVLVQCILPVNP 305 (364)
T ss_dssp EECCTTT-CCCCC--SEEEEESCGGGSCH--------------------HHHHHHHHHHHHHSCTTCEEEEEECCBCSSC
T ss_pred EeCCcCC-CCCCC--CEEEehHHhccCCH--------------------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCC
Confidence 7789988 57865 99999999996332 3467788888999999999988754443321
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
..........+.++..- .. +..-..+|.+|++++++++| |++.++...
T Consensus 306 ~~~~~~~~~~~~d~~m~---------~~-~~~g~~rt~~e~~~ll~~AG-F~~v~~~~~ 353 (364)
T 3p9c_A 306 EANPSSQGVFHVDMIML---------AH-NPGGRERYEREFQALARGAG-FTGVKSTYI 353 (364)
T ss_dssp CSSHHHHHHHHHHHHHH---------HH-CSSCCCCBHHHHHHHHHHTT-CCEEEEEEE
T ss_pred CcchhhhhHHHhHHHHH---------hc-ccCCccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 11100001112221110 00 12223578999999999999 998877655
No 55
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=98.37 E-value=2e-06 Score=79.64 Aligned_cols=107 Identities=16% Similarity=0.240 Sum_probs=66.9
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCch----
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGE---- 166 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~---- 166 (300)
+|++++|+|.|..++||+-..+ |...+|+.-++-|||||+|+++.+.+..-......
T Consensus 125 ~~~~~FD~V~~~~~lhy~~~~~-------------------~~~~~l~~~~r~LkpGG~~i~~~~~~~~~~~~~~~~~~~ 185 (302)
T 2vdw_A 125 FYFGKFNIIDWQFAIHYSFHPR-------------------HYATVMNNLSELTASGGKVLITTMDGDKLSKLTDKKTFI 185 (302)
T ss_dssp CCSSCEEEEEEESCGGGTCSTT-------------------THHHHHHHHHHHEEEEEEEEEEEECHHHHTTCCSCEEEE
T ss_pred ccCCCeeEEEECchHHHhCCHH-------------------HHHHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHhcCCcc
Confidence 6788999999999999964422 24678999999999999999988754321000000
Q ss_pred HHHHHHHHHHHcC-----CCchhh-------hccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 167 PMLMVLKDMISEG-----LAEESK-------VKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 167 ~l~~al~~mv~eG-----~i~~e~-------~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
.....+ ..+. .++.+. ...- ..|-|+.+++|+++++++.| |++.....+.
T Consensus 186 i~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~e~~v~~~el~~l~~~~G-l~lv~~~~f~ 247 (302)
T 2vdw_A 186 IHKNLP---SSENYMSVEKIADDRIVVYNPSTMST-PMTEYIIKKNDIVRVFNEYG-FVLVDNVDFA 247 (302)
T ss_dssp CCSSSC---TTTSEEEECEEETTEEEEBCTTTBSS-CEEEECCCHHHHHHHHHHTT-EEEEEEEEHH
T ss_pred cccccc---cccceeeeccccccccceeeccccCC-CceeeeeEHHHHHHHHHHCC-CEEEEecChH
Confidence 000000 0000 000111 0123 45668889999999999999 8887776553
No 56
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=98.37 E-value=1.8e-06 Score=80.03 Aligned_cols=151 Identities=18% Similarity=0.129 Sum_probs=89.6
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
.+|+|+||++|..+..+.+ . .|..++..-|+|. ... ........ .+.. .+ +.-
T Consensus 171 ~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~-----~~~---~a~~~~~~-~~~~-~~--v~~ 223 (332)
T 3i53_A 171 GHVVDVGGGSGGLLSALLT--------A-------HEDLSGTVLDLQG-----PAS---AAHRRFLD-TGLS-GR--AQV 223 (332)
T ss_dssp SEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECHH-----HHH---HHHHHHHH-TTCT-TT--EEE
T ss_pred CEEEEeCCChhHHHHHHHH--------H-------CCCCeEEEecCHH-----HHH---HHHHhhhh-cCcC-cC--eEE
Confidence 3799999999966653322 1 1345666667642 111 11111111 1110 12 233
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.++|+ .-+|. ++|+++++.+||..++ .+...+|+.-++-|+|||++++.-.-.++..
T Consensus 224 ~~~d~~-~~~p~-~~D~v~~~~vlh~~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~ 281 (332)
T 3i53_A 224 VVGSFF-DPLPA-GAGGYVLSAVLHDWDD--------------------LSAVAILRRCAEAAGSGGVVLVIEAVAGDEH 281 (332)
T ss_dssp EECCTT-SCCCC-SCSEEEEESCGGGSCH--------------------HHHHHHHHHHHHHHTTTCEEEEEECCCC---
T ss_pred ecCCCC-CCCCC-CCcEEEEehhhccCCH--------------------HHHHHHHHHHHHhcCCCCEEEEEeecCCCCC
Confidence 668888 44676 8999999999997333 2356788888899999999988754433321
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
+ . ...+..+ |+. ..-..+|.+|++++++++| |++.++...
T Consensus 282 ~-~--~~~d~~~-~~~--------------~~~~~~t~~e~~~ll~~aG-f~~~~~~~~ 321 (332)
T 3i53_A 282 A-G--TGMDLRM-LTY--------------FGGKERSLAELGELAAQAG-LAVRAAHPI 321 (332)
T ss_dssp C-C--HHHHHHH-HHH--------------HSCCCCCHHHHHHHHHHTT-EEEEEEEEC
T ss_pred c-c--HHHHHHH-Hhh--------------CCCCCCCHHHHHHHHHHCC-CEEEEEEEC
Confidence 1 1 1111111 111 1223578999999999999 998877543
No 57
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=98.36 E-value=3e-06 Score=71.43 Aligned_cols=87 Identities=10% Similarity=0.067 Sum_probs=58.9
Q ss_pred CccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCC
Q 045960 84 GSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHAT 163 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~ 163 (300)
+.+..--+ ++++|+++++.++||+.. .|...+|+.-.+-|+|||++++.........+
T Consensus 87 ~d~~~~~~-~~~~D~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~L~~gG~l~~~~~~~~~~~~- 144 (199)
T 2xvm_A 87 VDLNNLTF-DRQYDFILSTVVLMFLEA--------------------KTIPGLIANMQRCTKPGGYNLIVAAMDTADYP- 144 (199)
T ss_dssp CCGGGCCC-CCCEEEEEEESCGGGSCG--------------------GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSSC-
T ss_pred cchhhCCC-CCCceEEEEcchhhhCCH--------------------HHHHHHHHHHHHhcCCCeEEEEEEeeccCCcC-
Confidence 34444333 788999999999999652 23677888888999999998776543322110
Q ss_pred CchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 164 PGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 164 ~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
.- ....+..+.+|+++.++. |++.+.+..
T Consensus 145 ------------------------~~-~~~~~~~~~~~l~~~~~~---f~~~~~~~~ 173 (199)
T 2xvm_A 145 ------------------------CT-VGFPFAFKEGELRRYYEG---WERVKYNED 173 (199)
T ss_dssp ------------------------CC-SCCSCCBCTTHHHHHTTT---SEEEEEECC
T ss_pred ------------------------CC-CCCCCccCHHHHHHHhcC---CeEEEeccc
Confidence 00 112245688999999975 998887644
No 58
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=98.36 E-value=2.9e-06 Score=73.93 Aligned_cols=115 Identities=17% Similarity=0.202 Sum_probs=67.4
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.+.+..--+|++++|+++++.++|++.. ...+|+.-++-|+|||++++.........
T Consensus 94 ~~~d~~~~~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~ 151 (243)
T 3bkw_A 94 ERADLDKLHLPQDSFDLAYSSLALHYVED----------------------VARLFRTVHQALSPGGHFVFSTEHPIYMA 151 (243)
T ss_dssp EECCGGGCCCCTTCEEEEEEESCGGGCSC----------------------HHHHHHHHHHHEEEEEEEEEEEECHHHHC
T ss_pred EEcChhhccCCCCCceEEEEeccccccch----------------------HHHHHHHHHHhcCcCcEEEEEeCCccccc
Confidence 33455554578899999999999999643 45677778889999999999875321000
Q ss_pred CCCchHHHHHHH--HHHHcCCCchh----hhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 162 ATPGEPMLMVLK--DMISEGLAEES----KVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 162 ~~~~~~l~~al~--~mv~eG~i~~e----~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
..........-. .+...+...+. .+-.- ....|.++.+|+.++++++| |++.+++..
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~~~~~~~l~~aG-F~~~~~~~~ 214 (243)
T 3bkw_A 152 PARPGWAIDAEGRRTWPIDRYLVEGPRKTDWLAK-GVVKHHRTVGTTLNALIRSG-FAIEHVEEF 214 (243)
T ss_dssp CSSCSCEECTTSCEEEEECCTTCCEEECTTHHHH-SCCEEECCHHHHHHHHHHTT-CEEEEEEEC
T ss_pred CcCcceeecCCCceEEeecccccccceeeeeccC-ceEEEeccHHHHHHHHHHcC-CEeeeeccC
Confidence 000000000000 00000000000 00001 24456789999999999999 998887654
No 59
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=98.36 E-value=8.4e-06 Score=67.38 Aligned_cols=80 Identities=16% Similarity=0.186 Sum_probs=58.8
Q ss_pred ccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHH
Q 045960 89 RLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPM 168 (300)
Q Consensus 89 ~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l 168 (300)
.-+|++++|+++++.++|++.+ ...+|+.-.+-|+|||++++.-....+...
T Consensus 69 ~~~~~~~~D~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~------ 120 (170)
T 3i9f_A 69 KEIPDNSVDFILFANSFHDMDD----------------------KQHVISEVKRILKDDGRVIIIDWRKENTGI------ 120 (170)
T ss_dssp GGSCTTCEEEEEEESCSTTCSC----------------------HHHHHHHHHHHEEEEEEEEEEEECSSCCSS------
T ss_pred CCCCCCceEEEEEccchhcccC----------------------HHHHHHHHHHhcCCCCEEEEEEcCcccccc------
Confidence 3368899999999999999643 456777788899999999998765443210
Q ss_pred HHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 169 LMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 169 ~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
+ .......+.+|++.+++ | |++.+....
T Consensus 121 ----------~-----------~~~~~~~~~~~~~~~l~--G-f~~~~~~~~ 148 (170)
T 3i9f_A 121 ----------G-----------PPLSIRMDEKDYMGWFS--N-FVVEKRFNP 148 (170)
T ss_dssp ----------S-----------SCGGGCCCHHHHHHHTT--T-EEEEEEECS
T ss_pred ----------C-----------chHhhhcCHHHHHHHHh--C-cEEEEccCC
Confidence 0 11123468999999999 6 998777654
No 60
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=98.35 E-value=1.8e-06 Score=75.92 Aligned_cols=91 Identities=13% Similarity=0.193 Sum_probs=65.9
Q ss_pred CccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCC
Q 045960 84 GSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHAT 163 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~ 163 (300)
+.+..-.+|++++|+|+++.++|++.. .++..+|+.-.+-|+|||++++.-...... .
T Consensus 135 ~d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-~- 192 (241)
T 2ex4_A 135 CGLQDFTPEPDSYDVIWIQWVIGHLTD--------------------QHLAEFLRRCKGSLRPNGIIVIKDNMAQEG-V- 192 (241)
T ss_dssp CCGGGCCCCSSCEEEEEEESCGGGSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEEEEBSSS-E-
T ss_pred cChhhcCCCCCCEEEEEEcchhhhCCH--------------------HHHHHHHHHHHHhcCCCeEEEEEEccCCCc-c-
Confidence 445444567789999999999999543 235678888889999999999977655420 0
Q ss_pred CchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 164 PGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 164 ~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
. ++.. -+.+.++.+|+++++++.| |++.+.+..
T Consensus 193 ----------------~-----~~~~--~~~~~~~~~~~~~~l~~aG-f~~~~~~~~ 225 (241)
T 2ex4_A 193 ----------------I-----LDDV--DSSVCRDLDVVRRIICSAG-LSLLAEERQ 225 (241)
T ss_dssp ----------------E-----EETT--TTEEEEBHHHHHHHHHHTT-CCEEEEEEC
T ss_pred ----------------e-----eccc--CCcccCCHHHHHHHHHHcC-CeEEEeeec
Confidence 0 1111 2335569999999999999 998887755
No 61
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=98.35 E-value=5.8e-06 Score=70.33 Aligned_cols=94 Identities=9% Similarity=0.030 Sum_probs=67.4
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
-+.+..--+|++++|+|+++. .|| + ..|...+|+.-.+-|+|||++++......+..
T Consensus 82 ~~d~~~~~~~~~~fD~v~~~~-~~~----~-----------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~- 138 (202)
T 2kw5_A 82 QSNLADFDIVADAWEGIVSIF-CHL----P-----------------SSLRQQLYPKVYQGLKPGGVFILEGFAPEQLQ- 138 (202)
T ss_dssp CCBTTTBSCCTTTCSEEEEEC-CCC----C-----------------HHHHHHHHHHHHTTCCSSEEEEEEEECTTTGG-
T ss_pred EcChhhcCCCcCCccEEEEEh-hcC----C-----------------HHHHHHHHHHHHHhcCCCcEEEEEEecccccc-
Confidence 344444447889999999964 455 1 23567788888899999999999987654310
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeecc
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVSW 224 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~~ 224 (300)
.+ .... .-+.++++++|++++++ | |++.+++....+.
T Consensus 139 ---------------~~------~~~~-~~~~~~~~~~~l~~~l~--G-f~v~~~~~~~~~~ 175 (202)
T 2kw5_A 139 ---------------YN------TGGP-KDLDLLPKLETLQSELP--S-LNWLIANNLERNL 175 (202)
T ss_dssp ---------------GT------SCCS-SSGGGCCCHHHHHHHCS--S-SCEEEEEEEEEEC
T ss_pred ---------------CC------CCCC-CcceeecCHHHHHHHhc--C-ceEEEEEEEEeec
Confidence 00 1122 34578899999999999 6 9999998887663
No 62
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=98.35 E-value=3.8e-06 Score=73.14 Aligned_cols=44 Identities=16% Similarity=0.268 Sum_probs=36.6
Q ss_pred CcccEEEecc-ccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 94 NFLDFVYSSY-ALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 94 ~sv~~~~Ss~-alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
+++|+++++. ++||+.. ..|...+|+.-++-|+|||++++.+..
T Consensus 95 ~~fD~v~~~~~~~~~~~~-------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~ 139 (243)
T 3d2l_A 95 EPVDAITILCDSLNYLQT-------------------EADVKQTFDSAARLLTDGGKLLFDVHS 139 (243)
T ss_dssp SCEEEEEECTTGGGGCCS-------------------HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred CCcCEEEEeCCchhhcCC-------------------HHHHHHHHHHHHHhcCCCeEEEEEcCC
Confidence 7899999987 9999644 345778888888999999999997753
No 63
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=98.31 E-value=2.9e-06 Score=75.39 Aligned_cols=44 Identities=11% Similarity=0.175 Sum_probs=37.6
Q ss_pred CCcccEEEecc-ccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 93 HNFLDFVYSSY-ALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 93 ~~sv~~~~Ss~-alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
++++|+|+++. +|||+.. ..|...+|+.-++-|+|||++++...
T Consensus 108 ~~~fD~v~~~~~~l~~~~~-------------------~~~~~~~l~~~~~~L~pgG~l~i~~~ 152 (263)
T 3pfg_A 108 GRRFSAVTCMFSSIGHLAG-------------------QAELDAALERFAAHVLPDGVVVVEPW 152 (263)
T ss_dssp SCCEEEEEECTTGGGGSCH-------------------HHHHHHHHHHHHHTEEEEEEEEECCC
T ss_pred cCCcCEEEEcCchhhhcCC-------------------HHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 78999999998 9999644 34678889999999999999999754
No 64
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=98.31 E-value=1.1e-06 Score=79.98 Aligned_cols=103 Identities=17% Similarity=0.192 Sum_probs=65.1
Q ss_pred CCcccEEE-eccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC--CCCchHHH
Q 045960 93 HNFLDFVY-SSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH--ATPGEPML 169 (300)
Q Consensus 93 ~~sv~~~~-Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~--~~~~~~l~ 169 (300)
++++|+|+ ++.++||+.. .|...+|+.-++-|+|||++++......... +....
T Consensus 148 ~~~fD~v~~~~~~~~~~~~--------------------~~~~~~l~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~~--- 204 (299)
T 3g2m_A 148 DKRFGTVVISSGSINELDE--------------------ADRRGLYASVREHLEPGGKFLLSLAMSEAAESEPLERK--- 204 (299)
T ss_dssp SCCEEEEEECHHHHTTSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEEECCHHHHSCCCCC----
T ss_pred CCCcCEEEECCcccccCCH--------------------HHHHHHHHHHHHHcCCCcEEEEEeecCccccccchhcc---
Confidence 68899887 5688998532 3567888889999999999999987654210 00000
Q ss_pred HHHHHHHHcCC---Cc--------------------hhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEee
Q 045960 170 MVLKDMISEGL---AE--------------------ESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNV 222 (300)
Q Consensus 170 ~al~~mv~eG~---i~--------------------~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~ 222 (300)
..+.. ..|. +. ...+..+ ....++++++|++++++++| |++.+++.+..
T Consensus 205 ~~~~~--~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~t~~el~~ll~~aG-F~v~~~~~~~~ 276 (299)
T 3g2m_A 205 QELPG--RSGRRYVLHVRHLPAEEIQEITIHPADETTDPFVVC-THRRRLLAPDQVVRELVRSG-FDVIAQTPFAS 276 (299)
T ss_dssp --------------CCEEEEEEEEEEEEEEEESCC--CCCCEE-EEEEEEECHHHHHHHHHHTT-CEEEEEEEECT
T ss_pred ceeec--CCCcEEEEEEEEeccccEEEEEEEeccCCCCcEEEE-EEEEEEeCHHHHHHHHHHCC-CEEEEEEecCC
Confidence 00000 0010 00 0011223 34556789999999999999 99999887753
No 65
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=98.30 E-value=1.3e-06 Score=78.42 Aligned_cols=86 Identities=22% Similarity=0.194 Sum_probs=63.9
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHH
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVL 172 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al 172 (300)
..++|+|+|+.+|||+..- ..|+...|+.-++-|||||+|++......+. +
T Consensus 154 ~~~fD~V~~~~~l~~i~~~------------------~~~~~~~l~~i~r~LKPGG~li~~~~~~~~~--~--------- 204 (263)
T 2a14_A 154 LPLADCVLTLLAMECACCS------------------LDAYRAALCNLASLLKPGGHLVTTVTLRLPS--Y--------- 204 (263)
T ss_dssp CCCEEEEEEESCHHHHCSS------------------HHHHHHHHHHHHTTEEEEEEEEEEEESSCCE--E---------
T ss_pred cCCCCEeeehHHHHHhcCC------------------HHHHHHHHHHHHHHcCCCcEEEEEEeecCcc--c---------
Confidence 5689999999999996431 2467888999999999999999986432210 0
Q ss_pred HHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 173 KDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 173 ~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
..| .- .++.+..+.+|+...++++| |++.+++...
T Consensus 205 ----~~g--------~~-~~~~~~~~~~~l~~~l~~aG-F~i~~~~~~~ 239 (263)
T 2a14_A 205 ----MVG--------KR-EFSCVALEKGEVEQAVLDAG-FDIEQLLHSP 239 (263)
T ss_dssp ----EET--------TE-EEECCCCCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred ----eeC--------Ce-EeeccccCHHHHHHHHHHCC-CEEEEEeecc
Confidence 011 11 24456679999999999999 9999888764
No 66
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=98.30 E-value=3.8e-06 Score=71.98 Aligned_cols=81 Identities=16% Similarity=0.179 Sum_probs=55.8
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHH
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPML 169 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~ 169 (300)
-+|++++|+|+++.++||+.. ...+|+.-.+-|+|||++++....... ...
T Consensus 90 ~~~~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~L~pgG~l~i~~~~~~~-------~~~ 140 (211)
T 2gs9_A 90 PFPGESFDVVLLFTTLEFVED----------------------VERVLLEARRVLRPGGALVVGVLEALS-------PWA 140 (211)
T ss_dssp CSCSSCEEEEEEESCTTTCSC----------------------HHHHHHHHHHHEEEEEEEEEEEECTTS-------HHH
T ss_pred CCCCCcEEEEEEcChhhhcCC----------------------HHHHHHHHHHHcCCCCEEEEEecCCcC-------cHH
Confidence 367889999999999999654 456777788899999999999875532 112
Q ss_pred HHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHH
Q 045960 170 MVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVK 207 (300)
Q Consensus 170 ~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~ 207 (300)
.....+...| ... .-...++|++|++++++
T Consensus 141 ~~~~~~~~~~-------~~~-~~~~~~~s~~~l~~~l~ 170 (211)
T 2gs9_A 141 ALYRRLGEKG-------VLP-WAQARFLAREDLKALLG 170 (211)
T ss_dssp HHHHHHHHTT-------CTT-GGGCCCCCHHHHHHHHC
T ss_pred HHHHHHhhcc-------Ccc-ccccccCCHHHHHHHhc
Confidence 2222222222 111 12245689999999999
No 67
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=98.30 E-value=1.3e-05 Score=72.22 Aligned_cols=89 Identities=15% Similarity=0.177 Sum_probs=61.5
Q ss_pred CccccccCCC-CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 84 GSFYTRLFPH-NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 84 gSFy~~l~P~-~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
+.+..--++. +++|+|++..+||++.. .+...+++.-++-|+|||++++.....+..
T Consensus 140 ~D~~~l~~~~~~~FD~V~~~~~l~~l~~--------------------~~~~~~l~~~~~~LkpGG~l~l~~~~~~~~-- 197 (252)
T 2gb4_A 140 CSIFDLPRANIGKFDRIWDRGALVAINP--------------------GDHDRYADIILSLLRKEFQYLVAVLSYDPT-- 197 (252)
T ss_dssp SCTTTGGGGCCCCEEEEEESSSTTTSCG--------------------GGHHHHHHHHHHTEEEEEEEEEEEEECCTT--
T ss_pred CccccCCcccCCCEEEEEEhhhhhhCCH--------------------HHHHHHHHHHHHHcCCCeEEEEEEEecCCc--
Confidence 4555433333 79999999999999632 134567888889999999997554432210
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEee
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNV 222 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~ 222 (300)
.. .-|.|..+++|+++.++. + |+|..++....
T Consensus 198 -------------------------~~-~g~~~~~~~~el~~~l~~-~-f~v~~~~~~~~ 229 (252)
T 2gb4_A 198 -------------------------KH-AGPPFYVPSAELKRLFGT-K-CSMQCLEEVDA 229 (252)
T ss_dssp -------------------------SC-CCSSCCCCHHHHHHHHTT-T-EEEEEEEEEEC
T ss_pred -------------------------cC-CCCCCCCCHHHHHHHhhC-C-eEEEEEecccc
Confidence 01 223345789999999986 5 99999987653
No 68
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=98.29 E-value=8.4e-06 Score=77.42 Aligned_cols=48 Identities=19% Similarity=0.255 Sum_probs=40.2
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCC
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDN 159 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~ 159 (300)
-+|++++|+|+|+.++||+.+ ...+|+.-.+-|||||+|++.......
T Consensus 161 ~~~~~~fD~V~~~~~l~~~~d----------------------~~~~l~~~~r~LkpgG~l~i~~~~~~~ 208 (383)
T 4fsd_A 161 GVPDSSVDIVISNCVCNLSTN----------------------KLALFKEIHRVLRDGGELYFSDVYADR 208 (383)
T ss_dssp CCCTTCEEEEEEESCGGGCSC----------------------HHHHHHHHHHHEEEEEEEEEEEEEESS
T ss_pred CCCCCCEEEEEEccchhcCCC----------------------HHHHHHHHHHHcCCCCEEEEEEecccc
Confidence 578999999999999999644 467788888999999999998766543
No 69
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=98.29 E-value=1.2e-05 Score=75.94 Aligned_cols=152 Identities=18% Similarity=0.183 Sum_probs=92.9
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
.+|+|+||++|..++.+.. . .|.++++.-|+|. .-... ...... .+.. .+ +..
T Consensus 204 ~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~--~~~~a------~~~~~~-~~l~-~~--v~~ 256 (369)
T 3gwz_A 204 ATAVDIGGGRGSLMAAVLD--------A-------FPGLRGTLLERPP--VAEEA------RELLTG-RGLA-DR--CEI 256 (369)
T ss_dssp SEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECHH--HHHHH------HHHHHH-TTCT-TT--EEE
T ss_pred cEEEEeCCCccHHHHHHHH--------H-------CCCCeEEEEcCHH--HHHHH------HHhhhh-cCcC-Cc--eEE
Confidence 4799999999986654332 1 1356778888742 11111 111111 1110 12 234
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.++|+ .-+|. ++|+++++.+||+.++ .+...+|+.-++-|+|||++++.-...++..
T Consensus 257 ~~~d~~-~~~p~-~~D~v~~~~vlh~~~d--------------------~~~~~~L~~~~~~L~pgG~l~i~e~~~~~~~ 314 (369)
T 3gwz_A 257 LPGDFF-ETIPD-GADVYLIKHVLHDWDD--------------------DDVVRILRRIATAMKPDSRLLVIDNLIDERP 314 (369)
T ss_dssp EECCTT-TCCCS-SCSEEEEESCGGGSCH--------------------HHHHHHHHHHHTTCCTTCEEEEEEEBCCSSC
T ss_pred eccCCC-CCCCC-CceEEEhhhhhccCCH--------------------HHHHHHHHHHHHHcCCCCEEEEEEeccCCCC
Confidence 668888 45676 8999999999998443 2235788888999999999998765544322
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
. .. ..+.++..- . ...-..+|.+|++++++++| |++.++..
T Consensus 315 ~---~~--~~~~d~~~~--------~---~~~g~~~t~~e~~~ll~~aG-f~~~~~~~ 355 (369)
T 3gwz_A 315 A---AS--TLFVDLLLL--------V---LVGGAERSESEFAALLEKSG-LRVERSLP 355 (369)
T ss_dssp C---HH--HHHHHHHHH--------H---HHSCCCBCHHHHHHHHHTTT-EEEEEEEE
T ss_pred C---Cc--hhHhhHHHH--------h---hcCCccCCHHHHHHHHHHCC-CeEEEEEE
Confidence 1 11 222222110 0 01123478999999999999 99888754
No 70
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=98.29 E-value=5.8e-06 Score=75.29 Aligned_cols=97 Identities=12% Similarity=0.131 Sum_probs=66.3
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHH
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPML 169 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~ 169 (300)
.+|-+++|+++++.+|||+..- +...+|+.-++-|+|||+|++.....+. + +.+.
T Consensus 152 ~~d~~~~d~v~~~~vlh~~~d~--------------------~~~~~l~~~~~~L~pGG~l~i~~~~~~~--~---~~~~ 206 (274)
T 2qe6_A 152 MIDFSRPAAIMLVGMLHYLSPD--------------------VVDRVVGAYRDALAPGSYLFMTSLVDTG--L---PAQQ 206 (274)
T ss_dssp HCCTTSCCEEEETTTGGGSCTT--------------------THHHHHHHHHHHSCTTCEEEEEEEBCSS--C---HHHH
T ss_pred cCCCCCCEEEEEechhhhCCcH--------------------HHHHHHHHHHHhCCCCcEEEEEEecCcc--h---HHHH
Confidence 4666789999999999996651 3567788888899999999999876532 1 2222
Q ss_pred HHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec-ccC
Q 045960 170 MVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS-WLV 226 (300)
Q Consensus 170 ~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~-~~~ 226 (300)
. +.++ +... ..|+++++.+|+++++ .| |++........+ |.+
T Consensus 207 ~-~~~~----------~~~~-~~~~~~~s~~ei~~~l--~G-~~l~~~g~~~~~~w~p 249 (274)
T 2qe6_A 207 K-LARI----------TREN-LGEGWARTPEEIERQF--GD-FELVEPGVVYTALWRP 249 (274)
T ss_dssp H-HHHH----------HHHH-HSCCCCBCHHHHHHTT--TT-CEECTTCSEEGGGSSC
T ss_pred H-HHHH----------HHhc-CCCCccCCHHHHHHHh--CC-CeEccCcEeccccccC
Confidence 2 1221 1111 2477889999999999 46 887665444433 655
No 71
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=98.27 E-value=5.7e-06 Score=76.13 Aligned_cols=156 Identities=15% Similarity=0.185 Sum_probs=92.9
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
.+|.|+||++|..+..+. +. .|..+++.-|++ +.-...+. ..... +.. .+ +..
T Consensus 167 ~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~~--~~~~~a~~------~~~~~-~~~-~~--v~~ 219 (335)
T 2r3s_A 167 LKVLDISASHGLFGIAVA--------QH-------NPNAEIFGVDWA--SVLEVAKE------NARIQ-GVA-SR--YHT 219 (335)
T ss_dssp SEEEEETCTTCHHHHHHH--------HH-------CTTCEEEEEECH--HHHHHHHH------HHHHH-TCG-GG--EEE
T ss_pred CEEEEECCCcCHHHHHHH--------HH-------CCCCeEEEEecH--HHHHHHHH------HHHhc-CCC-cc--eEE
Confidence 489999999997665433 21 134788888976 33333321 11110 100 11 223
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.+++..--+|.+ +|+++++..+|..+. .+...+|+.-.+-|+|||++++.-...++..
T Consensus 220 ~~~d~~~~~~~~~-~D~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~ 278 (335)
T 2r3s_A 220 IAGSAFEVDYGND-YDLVLLPNFLHHFDV--------------------ATCEQLLRKIKTALAVEGKVIVFDFIPNSDR 278 (335)
T ss_dssp EESCTTTSCCCSC-EEEEEEESCGGGSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEECCCCTTS
T ss_pred EecccccCCCCCC-CcEEEEcchhccCCH--------------------HHHHHHHHHHHHhCCCCcEEEEEeecCCCCc
Confidence 5567766445655 999999999997432 3456788888899999999988765554321
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
... ....+.++... .. .-....++.+|+++++++.| |++.++..
T Consensus 279 ~~~---~~~~~~~~~~~---------~~-~~~~~~~t~~~~~~ll~~aG-f~~~~~~~ 322 (335)
T 2r3s_A 279 ITP---PDAAAFSLVML---------AT-TPNGDAYTFAEYESMFSNAG-FSHSQLHS 322 (335)
T ss_dssp SCS---HHHHHHHHHHH---------HH-SSSCCCCCHHHHHHHHHHTT-CSEEEEEC
T ss_pred CCc---hHHHHHHHHHH---------ee-CCCCCcCCHHHHHHHHHHCC-CCeeeEEE
Confidence 111 11111111100 01 11224569999999999999 88877643
No 72
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=98.26 E-value=2.3e-05 Score=72.29 Aligned_cols=151 Identities=19% Similarity=0.187 Sum_probs=91.2
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhh-cChhhHHHHhhhcCCCCCceeeee
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFK-SLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~-~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
+|.|+||++|..+..+.. . .|..+++.-|+|. .-...+ .+... .+ . .+ +..
T Consensus 170 ~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~~--~~~~a~~~~~~~--~~----~---~~--v~~ 221 (334)
T 2ip2_A 170 SFVDVGGGSGELTKAILQ--------A-------EPSARGVMLDREG--SLGVARDNLSSL--LA----G---ER--VSL 221 (334)
T ss_dssp EEEEETCTTCHHHHHHHH--------H-------CTTCEEEEEECTT--CTHHHHHHTHHH--HH----T---TS--EEE
T ss_pred EEEEeCCCchHHHHHHHH--------H-------CCCCEEEEeCcHH--HHHHHHHHHhhc--CC----C---Cc--EEE
Confidence 799999999976654432 1 1347889999842 222221 11110 00 0 12 233
Q ss_pred cCCccccccCCCCcccEEEeccccc-cccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALH-WLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNF 160 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alH-WLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~ 160 (300)
+.++|... +| +++|+++++..|| | +. .+...+|+.-++-|+|||++++.-...++.
T Consensus 222 ~~~d~~~~-~~-~~~D~v~~~~vl~~~-~~--------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~ 278 (334)
T 2ip2_A 222 VGGDMLQE-VP-SNGDIYLLSRIIGDL-DE--------------------AASLRLLGNCREAMAGDGRVVVIERTISAS 278 (334)
T ss_dssp EESCTTTC-CC-SSCSEEEEESCGGGC-CH--------------------HHHHHHHHHHHHHSCTTCEEEEEECCBCSS
T ss_pred ecCCCCCC-CC-CCCCEEEEchhccCC-CH--------------------HHHHHHHHHHHHhcCCCCEEEEEEeccCCC
Confidence 56788874 66 6899999999998 6 21 234677888889999999999886544432
Q ss_pred CCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 161 HATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 161 ~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
.. . ....+.++..- ..+ .-..++.+|+++++++.| |++.++...
T Consensus 279 ~~-~---~~~~~~~~~~~--------~~~---~~~~~t~~e~~~ll~~aG-f~~~~~~~~ 322 (334)
T 2ip2_A 279 EP-S---PMSVLWDVHLF--------MAC---AGRHRTTEEVVDLLGRGG-FAVERIVDL 322 (334)
T ss_dssp SC-C---HHHHHHHHHHH--------HHH---SCCCCBHHHHHHHHHHTT-EEEEEEEEE
T ss_pred CC-c---chhHHhhhHhH--------hhC---CCcCCCHHHHHHHHHHCC-CceeEEEEC
Confidence 21 1 11112221100 001 123468999999999999 998776543
No 73
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=98.25 E-value=7.2e-06 Score=72.31 Aligned_cols=87 Identities=18% Similarity=0.217 Sum_probs=63.7
Q ss_pred CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHHH
Q 045960 94 NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVLK 173 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al~ 173 (300)
+++|+|+++.+||++.. . ..|...+|+.-++-|+|||++++......+ ..
T Consensus 156 ~~fD~v~~~~~l~~~~~---~---------------~~~~~~~l~~~~~~LkpgG~li~~~~~~~~---~~--------- 205 (265)
T 2i62_A 156 PPADCLLSTLCLDAACP---D---------------LPAYRTALRNLGSLLKPGGFLVMVDALKSS---YY--------- 205 (265)
T ss_dssp CCEEEEEEESCHHHHCS---S---------------HHHHHHHHHHHHTTEEEEEEEEEEEESSCC---EE---------
T ss_pred CCccEEEEhhhhhhhcC---C---------------hHHHHHHHHHHHhhCCCCcEEEEEecCCCc---eE---------
Confidence 89999999999997543 1 345778888889999999999988742211 00
Q ss_pred HHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec
Q 045960 174 DMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS 223 (300)
Q Consensus 174 ~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~ 223 (300)
..| .. ..+.+..+.+++.+++++.| |++.+++.....
T Consensus 206 ---~~~--------~~-~~~~~~~~~~~~~~~l~~aG-f~~~~~~~~~~~ 242 (265)
T 2i62_A 206 ---MIG--------EQ-KFSSLPLGWETVRDAVEEAG-YTIEQFEVISQN 242 (265)
T ss_dssp ---EET--------TE-EEECCCCCHHHHHHHHHHTT-CEEEEEEEECCC
T ss_pred ---EcC--------Cc-cccccccCHHHHHHHHHHCC-CEEEEEEEeccc
Confidence 011 11 23445678999999999999 999998887544
No 74
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=98.24 E-value=9.3e-06 Score=71.23 Aligned_cols=94 Identities=13% Similarity=0.057 Sum_probs=59.3
Q ss_pred cccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHHHH
Q 045960 95 FLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVLKD 174 (300)
Q Consensus 95 sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al~~ 174 (300)
++|+++++.++||+.. .|...+|+.-.+-|+|||++++.-.+..+. . .+..
T Consensus 124 ~~d~v~~~~~~~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~-----~----~~~~ 174 (245)
T 3ggd_A 124 GDANIYMRTGFHHIPV--------------------EKRELLGQSLRILLGKQGAMYLIELGTGCI-----D----FFNS 174 (245)
T ss_dssp CSCEEEEESSSTTSCG--------------------GGHHHHHHHHHHHHTTTCEEEEEEECTTHH-----H----HHHH
T ss_pred CccEEEEcchhhcCCH--------------------HHHHHHHHHHHHHcCCCCEEEEEeCCcccc-----H----HHHH
Confidence 4899999999999642 246678888889999999988877655421 1 1222
Q ss_pred HHHc-CCCchh---hhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEee
Q 045960 175 MISE-GLAEES---KVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNV 222 (300)
Q Consensus 175 mv~e-G~i~~e---~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~ 222 (300)
+... +-.... .+..- ..|. ..+.+|+.+.+ +| |++........
T Consensus 175 ~~~~~~~~~~~~~~~~~~~-~~~~-~~~~~~~~~~~--aG-f~~~~~~~~~~ 221 (245)
T 3ggd_A 175 LLEKYGQLPYELLLVMEHG-IRPG-IFTAEDIELYF--PD-FEILSQGEGLF 221 (245)
T ss_dssp HHHHHSSCCHHHHHHHTTT-CCCC-CCCHHHHHHHC--TT-EEEEEEECCBC
T ss_pred HHhCCCCCchhhhhccccC-CCCC-ccCHHHHHHHh--CC-CEEEecccccc
Confidence 2211 111111 11122 2343 46899999999 77 99877665543
No 75
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.21 E-value=2.2e-06 Score=81.81 Aligned_cols=88 Identities=15% Similarity=0.247 Sum_probs=65.5
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHH
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLM 170 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~ 170 (300)
+|++++|+|+|+.+|||+.+ ...+|+.-++-|+|||++++...... .
T Consensus 167 ~~~~~fD~I~~~~vl~h~~d----------------------~~~~l~~~~r~LkpgG~l~i~~~~~~-----------~ 213 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIPY----------------------VQSVLEGVDALLAPDGVFVFEDPYLG-----------D 213 (416)
T ss_dssp HHHCCEEEEEEESCGGGCTT----------------------HHHHHHHHHHHEEEEEEEEEEEECHH-----------H
T ss_pred cCCCCEEEEEECChHHhcCC----------------------HHHHHHHHHHHcCCCeEEEEEeCChH-----------H
Confidence 56789999999999999643 67888889999999999999865332 1
Q ss_pred HHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 171 VLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 171 al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
.+ .. ..++.+..-.+++++.++++.++++.| |++.+++.+.
T Consensus 214 ~~----~~-----~~~~~~~~~~~~~~s~~~l~~ll~~aG-f~~~~~~~~~ 254 (416)
T 4e2x_A 214 IV----AK-----TSFDQIFDEHFFLFSATSVQGMAQRCG-FELVDVQRLP 254 (416)
T ss_dssp HH----HH-----TCGGGCSTTCCEECCHHHHHHHHHHTT-EEEEEEEEEC
T ss_pred hh----hh-----cchhhhhhhhhhcCCHHHHHHHHHHcC-CEEEEEEEcc
Confidence 11 11 112332023456789999999999999 9998888764
No 76
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=98.18 E-value=3.4e-05 Score=65.59 Aligned_cols=89 Identities=19% Similarity=0.240 Sum_probs=58.9
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHH
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLM 170 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~ 170 (300)
+|++++|+++++.++|+++ ..|...+|+.-++-|+|||++++......+.....+..+
T Consensus 85 ~~~~~fD~v~~~~~l~~~~--------------------~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~-- 142 (209)
T 2p8j_A 85 FKDESMSFVYSYGTIFHMR--------------------KNDVKEAIDEIKRVLKPGGLACINFLTTKDERYNKGEKI-- 142 (209)
T ss_dssp SCTTCEEEEEECSCGGGSC--------------------HHHHHHHHHHHHHHEEEEEEEEEEEEETTSTTTTCSEEE--
T ss_pred CCCCceeEEEEcChHHhCC--------------------HHHHHHHHHHHHHHcCCCcEEEEEEecccchhccchhhh--
Confidence 6789999999999999853 235678888889999999999999987654321100000
Q ss_pred HHHHHHHcCCCchhhhccccCCCc--ccCCHHHHHHHHHhcCC
Q 045960 171 VLKDMISEGLAEESKVKSFEDFPI--YRASVDEVKQIVKKEGS 211 (300)
Q Consensus 171 al~~mv~eG~i~~e~~d~f~~~P~--y~~s~eE~~~~i~~~gs 211 (300)
.+.... ..+.. .|. ++.+.+|++..+++.|.
T Consensus 143 ------~~~~~~--~~~~~--~~~~~~~~~~~e~~~~~~~~g~ 175 (209)
T 2p8j_A 143 ------GEGEFL--QLERG--EKVIHSYVSLEEADKYFKDMKV 175 (209)
T ss_dssp ------ETTEEE--ECC-C--CCEEEEEECHHHHHHTTTTSEE
T ss_pred ------ccccce--eccCC--CceeEEecCHHHHHHHHhhcCc
Confidence 000000 01111 233 57799999999998873
No 77
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=98.18 E-value=5.2e-06 Score=74.79 Aligned_cols=137 Identities=15% Similarity=0.182 Sum_probs=83.2
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|.+++.+... + .+|+..|.-..=- ......... .+ +-+..
T Consensus 122 ~~vLD~GcG~G~~~~~l~~~------------g-----~~v~~vD~s~~~~-------~~a~~~~~~-~~-----~~~~~ 171 (286)
T 3m70_A 122 CKVLDLGCGQGRNSLYLSLL------------G-----YDVTSWDHNENSI-------AFLNETKEK-EN-----LNIST 171 (286)
T ss_dssp CEEEEESCTTCHHHHHHHHT------------T-----CEEEEEESCHHHH-------HHHHHHHHH-TT-----CCEEE
T ss_pred CcEEEECCCCCHHHHHHHHC------------C-----CeEEEEECCHHHH-------HHHHHHHHH-cC-----CceEE
Confidence 37999999999988765421 1 3566666421110 000111111 11 11222
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.+.+..-.+ ++++|+|+++.++||++. .++..+|+.-.+-|+|||++++.........
T Consensus 172 ~~~d~~~~~~-~~~fD~i~~~~~~~~~~~--------------------~~~~~~l~~~~~~LkpgG~l~i~~~~~~~~~ 230 (286)
T 3m70_A 172 ALYDINAANI-QENYDFIVSTVVFMFLNR--------------------ERVPSIIKNMKEHTNVGGYNLIVAAMSTDDV 230 (286)
T ss_dssp EECCGGGCCC-CSCEEEEEECSSGGGSCG--------------------GGHHHHHHHHHHTEEEEEEEEEEEEBCCSSS
T ss_pred EEeccccccc-cCCccEEEEccchhhCCH--------------------HHHHHHHHHHHHhcCCCcEEEEEEecCCCCC
Confidence 3345544333 889999999999999743 2456788888899999999888665333211
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVE 218 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e 218 (300)
+ .- ..+.+..+.+|++..++. |++...+
T Consensus 231 ~-------------------------~~-~~~~~~~~~~~l~~~~~~---~~~~~~~ 258 (286)
T 3m70_A 231 P-------------------------CP-LPFSFTFAENELKEYYKD---WEFLEYN 258 (286)
T ss_dssp C-------------------------CS-SCCSCCBCTTHHHHHTTT---SEEEEEE
T ss_pred C-------------------------CC-CCccccCCHHHHHHHhcC---CEEEEEE
Confidence 1 01 233467788999998864 8887765
No 78
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=98.17 E-value=1.2e-05 Score=75.29 Aligned_cols=155 Identities=20% Similarity=0.199 Sum_probs=89.8
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+.. . .|..+++.-|+| +.-...+ ...... +.. .+ +..
T Consensus 184 ~~vlDvG~G~G~~~~~l~~--------~-------~~~~~~~~~D~~--~~~~~a~------~~~~~~-~~~-~~--v~~ 236 (374)
T 1qzz_A 184 RHVLDVGGGNGGMLAAIAL--------R-------APHLRGTLVELA--GPAERAR------RRFADA-GLA-DR--VTV 236 (374)
T ss_dssp CEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECH--HHHHHHH------HHHHHT-TCT-TT--EEE
T ss_pred CEEEEECCCcCHHHHHHHH--------H-------CCCCEEEEEeCH--HHHHHHH------HHHHhc-CCC-Cc--eEE
Confidence 4799999999966654432 1 135788888873 2221111 111111 110 12 233
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe--ecCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL--YNDN 159 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~--g~~~ 159 (300)
+.+++.. -+|.+ +|+++++..||+.+. .+...+|+.-.+-|+|||++++.-. ..++
T Consensus 237 ~~~d~~~-~~~~~-~D~v~~~~vl~~~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~ 294 (374)
T 1qzz_A 237 AEGDFFK-PLPVT-ADVVLLSFVLLNWSD--------------------EDALTILRGCVRALEPGGRLLVLDRADVEGD 294 (374)
T ss_dssp EECCTTS-CCSCC-EEEEEEESCGGGSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEECCH----
T ss_pred EeCCCCC-cCCCC-CCEEEEeccccCCCH--------------------HHHHHHHHHHHHhcCCCcEEEEEechhhcCC
Confidence 5577776 35654 999999999997433 2235778888899999999988765 3322
Q ss_pred CCCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 160 FHATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 160 ~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
... ... ..+.++... ... ....++.+|+++++++.| |++.++....
T Consensus 295 ~~~---~~~-~~~~~~~~~--------~~~---~~~~~~~~~~~~ll~~aG-f~~~~~~~~~ 340 (374)
T 1qzz_A 295 GAD---RFF-STLLDLRML--------TFM---GGRVRTRDEVVDLAGSAG-LALASERTSG 340 (374)
T ss_dssp ------HHH-HHHHHHHHH--------HHH---SCCCCCHHHHHHHHHTTT-EEEEEEEEEC
T ss_pred CCC---cch-hhhcchHHH--------HhC---CCcCCCHHHHHHHHHHCC-CceEEEEECC
Confidence 110 111 111221100 001 124579999999999999 9988877654
No 79
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=98.17 E-value=4.1e-06 Score=72.27 Aligned_cols=152 Identities=13% Similarity=0.037 Sum_probs=82.0
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCC---CCcee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHE---FGSCF 78 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~---~~~~f 78 (300)
-+|.|+||++|..+..+.. . .+..+|+.-|.-..--...-+.+. . .+.. ..++-
T Consensus 31 ~~vLDiGcG~G~~~~~l~~--------~-------~~~~~v~gvD~s~~~~~~a~~~~~-------~-~~~~~~~~~~v~ 87 (217)
T 3jwh_A 31 RRVIDLGCGQGNLLKILLK--------D-------SFFEQITGVDVSYRSLEIAQERLD-------R-LRLPRNQWERLQ 87 (217)
T ss_dssp CEEEEETCTTCHHHHHHHH--------C-------TTCSEEEEEESCHHHHHHHHHHHT-------T-CCCCHHHHTTEE
T ss_pred CEEEEeCCCCCHHHHHHHh--------h-------CCCCEEEEEECCHHHHHHHHHHHH-------H-hcCCcccCcceE
Confidence 3799999999998775432 1 123567777753221111111110 0 0000 00121
Q ss_pred eeecCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecC
Q 045960 79 VAASPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYND 158 (300)
Q Consensus 79 ~~~vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~ 158 (300)
.+-++....-++.+++|+|+++.++||+.. .++..+|+.-++-|+|||+++++....-
T Consensus 88 --~~~~d~~~~~~~~~~fD~v~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~li~~~~~~~ 145 (217)
T 3jwh_A 88 --LIQGALTYQDKRFHGYDAATVIEVIEHLDL--------------------SRLGAFERVLFEFAQPKIVIVTTPNIEY 145 (217)
T ss_dssp --EEECCTTSCCGGGCSCSEEEEESCGGGCCH--------------------HHHHHHHHHHHTTTCCSEEEEEEEBHHH
T ss_pred --EEeCCcccccccCCCcCEEeeHHHHHcCCH--------------------HHHHHHHHHHHHHcCCCEEEEEccCccc
Confidence 122333333456689999999999999632 3467888888999999996665543111
Q ss_pred CCCCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHH----HHHHhcCCeeEEEE
Q 045960 159 NFHATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVK----QIVKKEGSFDIQEV 217 (300)
Q Consensus 159 ~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~----~~i~~~gsF~I~~~ 217 (300)
...+..+.. +. ... .-..+..+.+|++ .++++.| |+++..
T Consensus 146 ----------~~~~~~~~~-~~------~~~-~~~~~~~~~~~l~~~~~~~~~~~G-f~v~~~ 189 (217)
T 3jwh_A 146 ----------NVKFANLPA-GK------LRH-KDHRFEWTRSQFQNWANKITERFA-YNVQFQ 189 (217)
T ss_dssp ----------HHHTC-------------------CCSCBCHHHHHHHHHHHHHHSS-EEEEEC
T ss_pred ----------chhhccccc-cc------ccc-cccccccCHHHHHHHHHHHHHHcC-ceEEEE
Confidence 111111111 10 011 1233457999999 7777888 877543
No 80
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.17 E-value=2.3e-05 Score=65.35 Aligned_cols=71 Identities=11% Similarity=0.088 Sum_probs=53.1
Q ss_pred CCCCcccEEEeccccccc-cCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHH
Q 045960 91 FPHNFLDFVYSSYALHWL-SRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPML 169 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWL-S~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~ 169 (300)
+|++++|+|+|+.++||+ .+ ...+|+.-++-|||||++++.-.....
T Consensus 59 ~~~~~fD~V~~~~~l~~~~~~----------------------~~~~l~~~~r~LkpgG~l~~~~~~~~~---------- 106 (176)
T 2ld4_A 59 HKESSFDIILSGLVPGSTTLH----------------------SAEILAEIARILRPGGCLFLKEPVETA---------- 106 (176)
T ss_dssp CCSSCEEEEEECCSTTCCCCC----------------------CHHHHHHHHHHEEEEEEEEEEEEEESS----------
T ss_pred CCCCCEeEEEECChhhhcccC----------------------HHHHHHHHHHHCCCCEEEEEEcccccc----------
Confidence 478899999999999996 32 356777888999999999995321110
Q ss_pred HHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEE
Q 045960 170 MVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQ 215 (300)
Q Consensus 170 ~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~ 215 (300)
. .-+.|.++.+|+...+++.| | |+
T Consensus 107 -------------------~-~~~~~~~~~~~~~~~l~~aG-f-i~ 130 (176)
T 2ld4_A 107 -------------------V-DNNSKVKTASKLCSALTLSG-L-VE 130 (176)
T ss_dssp -------------------S-CSSSSSCCHHHHHHHHHHTT-C-EE
T ss_pred -------------------c-ccccccCCHHHHHHHHHHCC-C-cE
Confidence 0 11456678899999999998 7 66
No 81
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=98.15 E-value=1.5e-05 Score=74.66 Aligned_cols=157 Identities=16% Similarity=0.126 Sum_probs=94.8
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|+|+||++|..+..+... .|..+++.-|+| ..-...+ ...... +.. .+ +..
T Consensus 192 ~~vLDvG~G~G~~~~~l~~~---------------~p~~~~~~~D~~--~~~~~a~------~~~~~~-~~~-~~--v~~ 244 (359)
T 1x19_A 192 KKMIDVGGGIGDISAAMLKH---------------FPELDSTILNLP--GAIDLVN------ENAAEK-GVA-DR--MRG 244 (359)
T ss_dssp CEEEEESCTTCHHHHHHHHH---------------CTTCEEEEEECG--GGHHHHH------HHHHHT-TCT-TT--EEE
T ss_pred CEEEEECCcccHHHHHHHHH---------------CCCCeEEEEecH--HHHHHHH------HHHHhc-CCC-CC--EEE
Confidence 37999999999977654431 135778888873 2222221 111111 110 11 233
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.++|..--+|+. |+++++..||.++. .+...+|+.-++-|+|||++++.-...++..
T Consensus 245 ~~~d~~~~~~~~~--D~v~~~~vlh~~~d--------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~ 302 (359)
T 1x19_A 245 IAVDIYKESYPEA--DAVLFCRILYSANE--------------------QLSTIMCKKAFDAMRSGGRLLILDMVIDDPE 302 (359)
T ss_dssp EECCTTTSCCCCC--SEEEEESCGGGSCH--------------------HHHHHHHHHHHTTCCTTCEEEEEEECCCCTT
T ss_pred EeCccccCCCCCC--CEEEEechhccCCH--------------------HHHHHHHHHHHHhcCCCCEEEEEecccCCCC
Confidence 5678877656665 99999999985222 3467788888999999999977655444321
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
. . .....+ .|... ...- .....+++.+|+++++++.| |++.++...
T Consensus 303 ~-~--~~~~~~-~~~~~-------~~~g-~~~~~~~t~~e~~~ll~~aG-f~~v~~~~~ 348 (359)
T 1x19_A 303 N-P--NFDYLS-HYILG-------AGMP-FSVLGFKEQARYKEILESLG-YKDVTMVRK 348 (359)
T ss_dssp S-C--CHHHHH-HHGGG-------GGSS-CCCCCCCCGGGHHHHHHHHT-CEEEEEEEE
T ss_pred C-c--hHHHHH-HHHHh-------cCCC-CcccCCCCHHHHHHHHHHCC-CceEEEEec
Confidence 1 1 122222 33211 0101 12234589999999999999 988776654
No 82
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=98.15 E-value=2.6e-05 Score=67.60 Aligned_cols=46 Identities=15% Similarity=0.169 Sum_probs=36.8
Q ss_pred CCcccEEEe-ccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 93 HNFLDFVYS-SYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 93 ~~sv~~~~S-s~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
++++|+++| ..++||+.. ..|...+|+.-++-|+|||++++.....
T Consensus 98 ~~~~D~v~~~~~~~~~~~~-------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 144 (239)
T 3bxo_A 98 GRKFSAVVSMFSSVGYLKT-------------------TEELGAAVASFAEHLEPGGVVVVEPWWF 144 (239)
T ss_dssp SSCEEEEEECTTGGGGCCS-------------------HHHHHHHHHHHHHTEEEEEEEEECCCCC
T ss_pred CCCCcEEEEcCchHhhcCC-------------------HHHHHHHHHHHHHhcCCCeEEEEEeccC
Confidence 678999995 559999654 3467888999999999999999975443
No 83
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.13 E-value=7.5e-06 Score=75.37 Aligned_cols=91 Identities=14% Similarity=0.217 Sum_probs=61.5
Q ss_pred EEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHHHHHHH
Q 045960 98 FVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVLKDMIS 177 (300)
Q Consensus 98 ~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al~~mv~ 177 (300)
.++|+++||||.. ..|....|+.-.+-|+|||+|++.....+.. + +.+..+...+
T Consensus 163 av~~~avLH~l~d-------------------~~~p~~~l~~l~~~L~PGG~Lvls~~~~d~~-p---~~~~~~~~~~-- 217 (277)
T 3giw_A 163 ALTVIAIVHFVLD-------------------EDDAVGIVRRLLEPLPSGSYLAMSIGTAEFA-P---QEVGRVAREY-- 217 (277)
T ss_dssp EEEEESCGGGSCG-------------------GGCHHHHHHHHHTTSCTTCEEEEEEECCTTS-H---HHHHHHHHHH--
T ss_pred hHHhhhhHhcCCc-------------------hhhHHHHHHHHHHhCCCCcEEEEEeccCCCC-H---HHHHHHHHHH--
Confidence 5889999999655 2224566777788999999999998776421 1 2222222222
Q ss_pred cCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec-ccC
Q 045960 178 EGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS-WLV 226 (300)
Q Consensus 178 eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~-~~~ 226 (300)
..- ..|+.++|.+|+...+. | |++..-.+...+ |.+
T Consensus 218 ---------~~~-g~p~~~rs~~ei~~~f~--G-lelvePG~v~~~~Wrp 254 (277)
T 3giw_A 218 ---------AAR-NMPMRLRTHAEAEEFFE--G-LELVEPGIVQVHKWHP 254 (277)
T ss_dssp ---------HHT-TCCCCCCCHHHHHHTTT--T-SEECTTCSEEGGGSSC
T ss_pred ---------Hhc-CCCCccCCHHHHHHHhC--C-CcccCCcEeecccccC
Confidence 222 46889999999999995 6 887665444444 766
No 84
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=98.12 E-value=2.9e-05 Score=72.34 Aligned_cols=156 Identities=15% Similarity=0.166 Sum_probs=92.4
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..+..+.. . .|.++++.-|+| +.-...+ ..... .+.. .+ +.-
T Consensus 185 ~~vLDvG~G~G~~~~~l~~--------~-------~~~~~~~~~D~~--~~~~~a~------~~~~~-~~~~-~~--v~~ 237 (360)
T 1tw3_A 185 RHVLDVGGGKGGFAAAIAR--------R-------APHVSATVLEMA--GTVDTAR------SYLKD-EGLS-DR--VDV 237 (360)
T ss_dssp SEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECT--THHHHHH------HHHHH-TTCT-TT--EEE
T ss_pred cEEEEeCCcCcHHHHHHHH--------h-------CCCCEEEEecCH--HHHHHHH------HHHHh-cCCC-Cc--eEE
Confidence 3799999999987765542 1 135788888873 2222221 11111 1110 12 223
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee-cCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY-NDNF 160 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g-~~~~ 160 (300)
+.+++.. -+|.+ +|+++++..||.++. .+...+|+.-.+-|+|||++++.-.. .++.
T Consensus 238 ~~~d~~~-~~~~~-~D~v~~~~vl~~~~~--------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~ 295 (360)
T 1tw3_A 238 VEGDFFE-PLPRK-ADAIILSFVLLNWPD--------------------HDAVRILTRCAEALEPGGRILIHERDDLHEN 295 (360)
T ss_dssp EECCTTS-CCSSC-EEEEEEESCGGGSCH--------------------HHHHHHHHHHHHTEEEEEEEEEEECCBCGGG
T ss_pred EeCCCCC-CCCCC-ccEEEEcccccCCCH--------------------HHHHHHHHHHHHhcCCCcEEEEEEEeccCCC
Confidence 5567775 35654 999999999986332 23457788888899999999987654 3222
Q ss_pred CCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEee
Q 045960 161 HATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNV 222 (300)
Q Consensus 161 ~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~ 222 (300)
.. . ... .+.++... ... . ...++.+|+++++++.| |++.++.....
T Consensus 296 ~~-~--~~~-~~~~~~~~--------~~~-~--~~~~t~~e~~~ll~~aG-f~~~~~~~~~~ 341 (360)
T 1tw3_A 296 SF-N--EQF-TELDLRML--------VFL-G--GALRTREKWDGLAASAG-LVVEEVRQLPS 341 (360)
T ss_dssp CC-S--HHH-HHHHHHHH--------HHH-S--CCCCBHHHHHHHHHHTT-EEEEEEEEEEC
T ss_pred CC-c--chh-hhccHHHh--------hhc-C--CcCCCHHHHHHHHHHCC-CeEEEEEeCCC
Confidence 11 1 111 11111100 001 1 23479999999999999 99888776643
No 85
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.12 E-value=1.6e-05 Score=74.99 Aligned_cols=150 Identities=18% Similarity=0.182 Sum_probs=90.9
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|+|+||++|..+..+.. . .|.++++.-|+| ..-...+. .++ +..
T Consensus 211 ~~vLDvG~G~G~~~~~l~~--------~-------~~~~~~~~~D~~--~~~~~a~~---------------~~~--v~~ 256 (372)
T 1fp1_D 211 STLVDVGGGSGRNLELIIS--------K-------YPLIKGINFDLP--QVIENAPP---------------LSG--IEH 256 (372)
T ss_dssp SEEEEETCTTSHHHHHHHH--------H-------CTTCEEEEEECH--HHHTTCCC---------------CTT--EEE
T ss_pred CEEEEeCCCCcHHHHHHHH--------H-------CCCCeEEEeChH--HHHHhhhh---------------cCC--CEE
Confidence 3799999999988765432 1 135777777864 11111111 122 344
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+.|+|+. -+|. +|+++++.+||+++. .+...+|+.-++-|+|||++++.-...++..
T Consensus 257 ~~~d~~~-~~~~--~D~v~~~~~lh~~~d--------------------~~~~~~l~~~~~~L~pgG~l~i~e~~~~~~~ 313 (372)
T 1fp1_D 257 VGGDMFA-SVPQ--GDAMILKAVCHNWSD--------------------EKCIEFLSNCHKALSPNGKVIIVEFILPEEP 313 (372)
T ss_dssp EECCTTT-CCCC--EEEEEEESSGGGSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEEEEECSSC
T ss_pred EeCCccc-CCCC--CCEEEEecccccCCH--------------------HHHHHHHHHHHHhcCCCCEEEEEEeccCCCC
Confidence 6678887 4675 899999999998443 2245788888999999999998854444322
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
..........+.++..-. .. . -..++.+|+++++++.| |++.++...
T Consensus 314 ~~~~~~~~~~~~d~~~~~--------~~-~--~~~~t~~e~~~ll~~aG-f~~~~~~~~ 360 (372)
T 1fp1_D 314 NTSEESKLVSTLDNLMFI--------TV-G--GRERTEKQYEKLSKLSG-FSKFQVACR 360 (372)
T ss_dssp CSSHHHHHHHHHHHHHHH--------HH-S--CCCEEHHHHHHHHHHTT-CSEEEEEEE
T ss_pred ccchHHHHHHHhhHHHHh--------cc-C--CccCCHHHHHHHHHHCC-CceEEEEEc
Confidence 111000011222221000 00 0 12358999999999999 888776553
No 86
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.10 E-value=8e-06 Score=70.22 Aligned_cols=68 Identities=19% Similarity=0.218 Sum_probs=52.7
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHH
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLM 170 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~ 170 (300)
+|++++|+++++.++|| .. ...+|+.-++-|+|||++++.-...
T Consensus 111 ~~~~~fD~v~~~~~l~~-~~----------------------~~~~l~~~~~~L~~gG~l~i~~~~~------------- 154 (215)
T 2zfu_A 111 LEDESVDVAVFCLSLMG-TN----------------------IRDFLEEANRVLKPGGLLKVAEVSS------------- 154 (215)
T ss_dssp CCTTCEEEEEEESCCCS-SC----------------------HHHHHHHHHHHEEEEEEEEEEECGG-------------
T ss_pred CCCCCEeEEEEehhccc-cC----------------------HHHHHHHHHHhCCCCeEEEEEEcCC-------------
Confidence 67889999999999997 22 4667777788999999999874211
Q ss_pred HHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 171 VLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 171 al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
. +++.+++.+++++.| |++.+...
T Consensus 155 -----------------~-------~~~~~~~~~~l~~~G-f~~~~~~~ 178 (215)
T 2zfu_A 155 -----------------R-------FEDVRTFLRAVTKLG-FKIVSKDL 178 (215)
T ss_dssp -----------------G-------CSCHHHHHHHHHHTT-EEEEEEEC
T ss_pred -----------------C-------CCCHHHHHHHHHHCC-CEEEEEec
Confidence 1 128899999999998 88877553
No 87
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.09 E-value=2.5e-05 Score=72.90 Aligned_cols=148 Identities=20% Similarity=0.293 Sum_probs=90.4
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..+..+. +. .|..+++.-|+|. ....... .++ +..
T Consensus 190 ~~vlDvG~G~G~~~~~l~--------~~-------~p~~~~~~~D~~~-----~~~~a~~------------~~~--v~~ 235 (352)
T 1fp2_A 190 ESIVDVGGGTGTTAKIIC--------ET-------FPKLKCIVFDRPQ-----VVENLSG------------SNN--LTY 235 (352)
T ss_dssp SEEEEETCTTSHHHHHHH--------HH-------CTTCEEEEEECHH-----HHTTCCC------------BTT--EEE
T ss_pred ceEEEeCCCccHHHHHHH--------HH-------CCCCeEEEeeCHH-----HHhhccc------------CCC--cEE
Confidence 379999999997665433 22 1346788888741 1111111 122 444
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhcc---CceeEEEEeecC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKS---QGRMVLTLLYND 158 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~---GG~~vl~~~g~~ 158 (300)
+.|.|+. -+|. +|+++++.+||.++. .+...+|+.-++-|+| ||++++.-...+
T Consensus 236 ~~~d~~~-~~p~--~D~v~~~~~lh~~~d--------------------~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 292 (352)
T 1fp2_A 236 VGGDMFT-SIPN--ADAVLLKYILHNWTD--------------------KDCLRILKKCKEAVTNDGKRGKVTIIDMVID 292 (352)
T ss_dssp EECCTTT-CCCC--CSEEEEESCGGGSCH--------------------HHHHHHHHHHHHHHSGGGCCCEEEEEECEEC
T ss_pred EeccccC-CCCC--ccEEEeehhhccCCH--------------------HHHHHHHHHHHHhCCCCCCCcEEEEEEeecC
Confidence 6688887 4564 999999999996332 2245778888899999 999988865554
Q ss_pred CCCCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 159 NFHATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 159 ~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
+......-.-...+.++.. +. + + -..++.+|+++++++.| |++.++..
T Consensus 293 ~~~~~~~~~~~~~~~d~~~--------~~-~-~--g~~~t~~e~~~ll~~aG-f~~~~~~~ 340 (352)
T 1fp2_A 293 KKKDENQVTQIKLLMDVNM--------AC-L-N--GKERNEEEWKKLFIEAG-FQHYKISP 340 (352)
T ss_dssp TTTSCHHHHHHHHHHHHHG--------GG-G-T--CCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCCCccchhhhHhhccHHH--------Hh-c-c--CCCCCHHHHHHHHHHCC-CCeeEEEe
Confidence 3221100001112222210 00 2 2 33468999999999999 88777654
No 88
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=98.09 E-value=1.7e-05 Score=68.28 Aligned_cols=158 Identities=18% Similarity=0.085 Sum_probs=84.7
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..+..+.. ..+..+|+.-|.-..--...-+.+... .+..... .++- .
T Consensus 31 ~~vLDiGcG~G~~~~~l~~---------------~~~~~~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~---~~v~--~ 88 (219)
T 3jwg_A 31 KKVIDLGCGEGNLLSLLLK---------------DKSFEQITGVDVSYSVLERAKDRLKID--RLPEMQR---KRIS--L 88 (219)
T ss_dssp CEEEEETCTTCHHHHHHHT---------------STTCCEEEEEESCHHHHHHHHHHHTGG--GSCHHHH---TTEE--E
T ss_pred CEEEEecCCCCHHHHHHHh---------------cCCCCEEEEEECCHHHHHHHHHHHHhh--ccccccC---cceE--E
Confidence 3799999999987765432 113367777775322111111111100 0000000 0111 1
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
+-++....-++.+++|+|+++.++||+.. .++..+|+.-++-|+|||.++.+....-+.
T Consensus 89 ~~~d~~~~~~~~~~fD~V~~~~~l~~~~~--------------------~~~~~~l~~~~~~LkpgG~~i~~~~~~~~~- 147 (219)
T 3jwg_A 89 FQSSLVYRDKRFSGYDAATVIEVIEHLDE--------------------NRLQAFEKVLFEFTRPQTVIVSTPNKEYNF- 147 (219)
T ss_dssp EECCSSSCCGGGTTCSEEEEESCGGGCCH--------------------HHHHHHHHHHHTTTCCSEEEEEEEBGGGGG-
T ss_pred EeCcccccccccCCCCEEEEHHHHHhCCH--------------------HHHHHHHHHHHHhhCCCEEEEEccchhhhh-
Confidence 22344444456789999999999999633 246788888999999999665544322111
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHH----HHHHhcCCeeEEEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVK----QIVKKEGSFDIQEVETF 220 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~----~~i~~~gsF~I~~~e~~ 220 (300)
... .+ ..+. ... .-..+..+.+|++ .++++.| |+++....-
T Consensus 148 ~~~---------~~-~~~~------~~~-~~~~~~~~~~~l~~~~~~l~~~~G-f~v~~~~~g 192 (219)
T 3jwg_A 148 HYG---------NL-FEGN------LRH-RDHRFEWTRKEFQTWAVKVAEKYG-YSVRFLQIG 192 (219)
T ss_dssp CCC---------CT------------GG-GCCTTSBCHHHHHHHHHHHHHHHT-EEEEEEEES
T ss_pred hhc---------cc-Cccc------ccc-cCceeeecHHHHHHHHHHHHHHCC-cEEEEEecC
Confidence 000 00 0000 011 1223456899999 6677788 887665433
No 89
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.09 E-value=1.4e-05 Score=74.93 Aligned_cols=149 Identities=19% Similarity=0.231 Sum_probs=90.1
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|+|+||++|..+..+.. . .|.++++.-|+| .. ...... .++ +..
T Consensus 195 ~~vlDvG~G~G~~~~~l~~--------~-------~p~~~~~~~D~~--~~---~~~a~~------------~~~--v~~ 240 (358)
T 1zg3_A 195 ESLVDVGGGTGGVTKLIHE--------I-------FPHLKCTVFDQP--QV---VGNLTG------------NEN--LNF 240 (358)
T ss_dssp SEEEEETCTTSHHHHHHHH--------H-------CTTSEEEEEECH--HH---HSSCCC------------CSS--EEE
T ss_pred CEEEEECCCcCHHHHHHHH--------H-------CCCCeEEEeccH--HH---Hhhccc------------CCC--cEE
Confidence 3799999999987765432 1 134667777874 21 111111 123 444
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhcc---CceeEEEEeecC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKS---QGRMVLTLLYND 158 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~---GG~~vl~~~g~~ 158 (300)
+.|+|+. -+| ++|+++++..||+++. .+...+|+.-.+-|+| ||++++.-...+
T Consensus 241 ~~~d~~~-~~~--~~D~v~~~~vlh~~~d--------------------~~~~~~l~~~~~~L~p~~~gG~l~i~e~~~~ 297 (358)
T 1zg3_A 241 VGGDMFK-SIP--SADAVLLKWVLHDWND--------------------EQSLKILKNSKEAISHKGKDGKVIIIDISID 297 (358)
T ss_dssp EECCTTT-CCC--CCSEEEEESCGGGSCH--------------------HHHHHHHHHHHHHTGGGGGGCEEEEEECEEC
T ss_pred EeCccCC-CCC--CceEEEEcccccCCCH--------------------HHHHHHHHHHHHhCCCCCCCcEEEEEEeccC
Confidence 6788887 456 4999999999998433 2345788888899999 999988754443
Q ss_pred CCCCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 159 NFHATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 159 ~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
+......-.....+.++..- ... + -..++.+|+++++++.| |++.++..
T Consensus 298 ~~~~~~~~~~~~~~~d~~~~--------~~~-~--g~~~t~~e~~~ll~~aG-f~~~~~~~ 346 (358)
T 1zg3_A 298 ETSDDRGLTELQLDYDLVML--------TMF-L--GKERTKQEWEKLIYDAG-FSSYKITP 346 (358)
T ss_dssp TTCSCHHHHHHHHHHHHHHH--------HHH-S--CCCEEHHHHHHHHHHTT-CCEEEEEE
T ss_pred CCCccchhhhHHHhhCHHHh--------ccC-C--CCCCCHHHHHHHHHHcC-CCeeEEEe
Confidence 32211000011122222100 001 1 12469999999999999 88877654
No 90
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=98.08 E-value=1.5e-05 Score=68.43 Aligned_cols=47 Identities=15% Similarity=0.238 Sum_probs=39.2
Q ss_pred CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 92 PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
|++++|+|+++.++||+.. ..++..+|+.-++-|+|||++++.....
T Consensus 111 ~~~~fD~v~~~~~l~~~~~-------------------~~~~~~~l~~~~~~L~pgG~l~~~~~~~ 157 (216)
T 3ofk_A 111 TAELFDLIVVAEVLYYLED-------------------MTQMRTAIDNMVKMLAPGGHLVFGSARD 157 (216)
T ss_dssp CSCCEEEEEEESCGGGSSS-------------------HHHHHHHHHHHHHTEEEEEEEEEEEECH
T ss_pred CCCCccEEEEccHHHhCCC-------------------HHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 7899999999999999665 2346678888899999999999877533
No 91
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=98.07 E-value=3.3e-05 Score=64.31 Aligned_cols=77 Identities=13% Similarity=0.223 Sum_probs=56.3
Q ss_pred CccccccCCCCcccEEEec-cccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 84 GSFYTRLFPHNFLDFVYSS-YALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss-~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
+.+..--+|++++|+++++ ..+|+++. .+...+|+.-.+-|+|||++++......
T Consensus 96 ~d~~~~~~~~~~~D~i~~~~~~~~~~~~--------------------~~~~~~l~~~~~~l~~~G~l~~~~~~~~---- 151 (195)
T 3cgg_A 96 GDLSVDQISETDFDLIVSAGNVMGFLAE--------------------DGREPALANIHRALGADGRAVIGFGAGR---- 151 (195)
T ss_dssp CCTTTSCCCCCCEEEEEECCCCGGGSCH--------------------HHHHHHHHHHHHHEEEEEEEEEEEETTS----
T ss_pred cccccCCCCCCceeEEEECCcHHhhcCh--------------------HHHHHHHHHHHHHhCCCCEEEEEeCCCC----
Confidence 3444334678899999998 78888532 3467788888899999999998764221
Q ss_pred CCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEE
Q 045960 163 TPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVE 218 (300)
Q Consensus 163 ~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e 218 (300)
..+.+++...+++.| |++.++.
T Consensus 152 ---------------------------------~~~~~~~~~~l~~~G-f~~~~~~ 173 (195)
T 3cgg_A 152 ---------------------------------GWVFGDFLEVAERVG-LELENAF 173 (195)
T ss_dssp ---------------------------------SCCHHHHHHHHHHHT-EEEEEEE
T ss_pred ---------------------------------CcCHHHHHHHHHHcC-CEEeeee
Confidence 035778888898888 8876654
No 92
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=98.07 E-value=1.7e-05 Score=68.31 Aligned_cols=54 Identities=15% Similarity=0.205 Sum_probs=40.0
Q ss_pred CccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 84 GSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
+.+..--+|++++|+++++.++|+.. ..|...+|+.-++-|+|||++++.....
T Consensus 92 ~d~~~~~~~~~~~D~v~~~~~~~~~~--------------------~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 145 (227)
T 1ve3_A 92 GDARKLSFEDKTFDYVIFIDSIVHFE--------------------PLELNQVFKEVRRVLKPSGKFIMYFTDL 145 (227)
T ss_dssp CCTTSCCSCTTCEEEEEEESCGGGCC--------------------HHHHHHHHHHHHHHEEEEEEEEEEEECH
T ss_pred CchhcCCCCCCcEEEEEEcCchHhCC--------------------HHHHHHHHHHHHHHcCCCcEEEEEecCh
Confidence 44444346788999999999955421 2346778888889999999999987653
No 93
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=98.06 E-value=3.2e-06 Score=77.22 Aligned_cols=92 Identities=14% Similarity=0.140 Sum_probs=58.0
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHH
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLM 170 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~ 170 (300)
++.+++|+|+|..++||+.- ..-..+...+|+.-++-|+|||+|++....
T Consensus 173 ~~~~~fD~I~~~~vl~~ihl----------------~~~~~~~~~~l~~~~~~LkpGG~lil~~~~-------------- 222 (292)
T 3g07_A 173 AQTPEYDVVLCLSLTKWVHL----------------NWGDEGLKRMFRRIYRHLRPGGILVLEPQP-------------- 222 (292)
T ss_dssp TCCCCEEEEEEESCHHHHHH----------------HHHHHHHHHHHHHHHHHEEEEEEEEEECCC--------------
T ss_pred ccCCCcCEEEEChHHHHhhh----------------cCCHHHHHHHHHHHHHHhCCCcEEEEecCC--------------
Confidence 57899999999999999520 011346788999999999999999986321
Q ss_pred HHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHh--cCCeeEEEE
Q 045960 171 VLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKK--EGSFDIQEV 217 (300)
Q Consensus 171 al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~--~gsF~I~~~ 217 (300)
|........++++-...+ . .....++++..++.+ .| |+..++
T Consensus 223 -~~~y~~~~~~~~~~~~~~-~--~~~~~p~~~~~~L~~~~~G-F~~~~~ 266 (292)
T 3g07_A 223 -WSSYGKRKTLTETIYKNY-Y--RIQLKPEQFSSYLTSPDVG-FSSYEL 266 (292)
T ss_dssp -HHHHHTTTTSCHHHHHHH-H--HCCCCGGGHHHHHTSTTTC-CCEEEE
T ss_pred -chhhhhhhcccHHHHhhh-h--cEEEcHHHHHHHHHhcCCC-ceEEEE
Confidence 111111222233222222 1 111236899999998 77 865443
No 94
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=97.92 E-value=3.8e-05 Score=66.27 Aligned_cols=166 Identities=14% Similarity=0.156 Sum_probs=89.7
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCce-eeee
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSC-FVAA 81 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~-f~~~ 81 (300)
+|+|+||++|..++.+... .|..+|+.-|.-..=-... ...... .+. .++ |+.+
T Consensus 44 ~vLDiGcG~G~~~~~la~~---------------~p~~~v~gvD~s~~~l~~a-------~~~~~~-~~~--~~v~~~~~ 98 (214)
T 1yzh_A 44 IHVEVGSGKGAFVSGMAKQ---------------NPDINYIGIDIQKSVLSYA-------LDKVLE-VGV--PNIKLLWV 98 (214)
T ss_dssp EEEEESCTTSHHHHHHHHH---------------CTTSEEEEEESCHHHHHHH-------HHHHHH-HCC--SSEEEEEC
T ss_pred eEEEEccCcCHHHHHHHHH---------------CCCCCEEEEEcCHHHHHHH-------HHHHHH-cCC--CCEEEEeC
Confidence 6999999999888755321 1346777777421111100 111111 111 232 2222
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFH 161 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~ 161 (300)
=... ..+.+|++++|+++++...+|...-- +.. .-+...+|+.-++-|+|||++++.....
T Consensus 99 d~~~-~~~~~~~~~~D~i~~~~~~~~~~~~~-------~~~-------~~~~~~~l~~~~~~LkpgG~l~~~~~~~---- 159 (214)
T 1yzh_A 99 DGSD-LTDYFEDGEIDRLYLNFSDPWPKKRH-------EKR-------RLTYKTFLDTFKRILPENGEIHFKTDNR---- 159 (214)
T ss_dssp CSSC-GGGTSCTTCCSEEEEESCCCCCSGGG-------GGG-------STTSHHHHHHHHHHSCTTCEEEEEESCH----
T ss_pred CHHH-HHhhcCCCCCCEEEEECCCCccccch-------hhh-------ccCCHHHHHHHHHHcCCCcEEEEEeCCH----
Confidence 1111 33457899999999998888854200 000 0024567887888899999998865211
Q ss_pred CCCchHHHHHHHHHHHcCCCchhhh-ccccCCCcccCCHHHHHHHHHhcCCeeEEEEE
Q 045960 162 ATPGEPMLMVLKDMISEGLAEESKV-KSFEDFPIYRASVDEVKQIVKKEGSFDIQEVE 218 (300)
Q Consensus 162 ~~~~~~l~~al~~mv~eG~i~~e~~-d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e 218 (300)
+....++..|.+.|.-..+.. |-+ .-+.......++++...+.| +.|-++.
T Consensus 160 ----~~~~~~~~~~~~~g~~~~~~~~d~~-~~~~~~~~~t~~e~~~~~~g-~~i~~~~ 211 (214)
T 1yzh_A 160 ----GLFEYSLVSFSQYGMKLNGVWLDLH-ASDFEGNVMTEYEQKFSNKG-QVIYRVE 211 (214)
T ss_dssp ----HHHHHHHHHHHHHTCEEEEEESSGG-GSCCCCCCCCHHHHHTGGGC-CCCEEEE
T ss_pred ----HHHHHHHHHHHHCCCeeeecccccc-ccCCCCCCCcHHHHHHHHCC-CCeEEEE
Confidence 234455555656674222211 223 23333334457778888887 6665544
No 95
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=97.90 E-value=6.4e-05 Score=67.89 Aligned_cols=158 Identities=13% Similarity=-0.005 Sum_probs=85.6
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
.+|.|+||++|..++.+.. . -++..+|+..|+-..=-. .. .... ...+ .+ +..
T Consensus 24 ~~vLDiGcG~G~~~~~l~~--------~------~~~~~~v~gvD~s~~~~~-~a------~~~~-~~~~---~~--v~~ 76 (284)
T 3gu3_A 24 VHIVDYGCGYGYLGLVLMP--------L------LPEGSKYTGIDSGETLLA-EA------RELF-RLLP---YD--SEF 76 (284)
T ss_dssp CEEEEETCTTTHHHHHHTT--------T------SCTTCEEEEEESCHHHHH-HH------HHHH-HSSS---SE--EEE
T ss_pred CeEEEecCCCCHHHHHHHH--------h------CCCCCEEEEEECCHHHHH-HH------HHHH-HhcC---Cc--eEE
Confidence 4799999999987764421 1 111367788775211000 00 0000 0001 11 222
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec----
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN---- 157 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~---- 157 (300)
+-+.+..--+ ++++|+|+++.++|++.. +..+|+.-.+-|+|||++++.-+..
T Consensus 77 ~~~d~~~~~~-~~~fD~v~~~~~l~~~~~----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~ 133 (284)
T 3gu3_A 77 LEGDATEIEL-NDKYDIAICHAFLLHMTT----------------------PETMLQKMIHSVKKGGKIICFEPHWISNM 133 (284)
T ss_dssp EESCTTTCCC-SSCEEEEEEESCGGGCSS----------------------HHHHHHHHHHTEEEEEEEEEEECCHHHHH
T ss_pred EEcchhhcCc-CCCeeEEEECChhhcCCC----------------------HHHHHHHHHHHcCCCCEEEEEecchhccc
Confidence 3344444333 579999999999999644 4567777888999999999886541
Q ss_pred -C--CCCCCC-chHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEE
Q 045960 158 -D--NFHATP-GEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVET 219 (300)
Q Consensus 158 -~--~~~~~~-~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~ 219 (300)
. ..+... .......|.++..++ .... .. ..++.+++..+++++| |+..+...
T Consensus 134 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~-~~--~~~~~~~l~~~l~~aG-F~~v~~~~ 189 (284)
T 3gu3_A 134 ASYLLDGEKQSEFIQLGVLQKLFESD------TQRN-GK--DGNIGMKIPIYLSELG-VKNIECRV 189 (284)
T ss_dssp HSEEETTSCHHHHCCHHHHHHHHHHH------HHHT-CC--CTTGGGTHHHHHHHTT-CEEEEEEE
T ss_pred ccceecCcchhhccchHHHHHHHHHH------hhhh-cc--cccHHHHHHHHHHHcC-CCeEEEEE
Confidence 0 000000 000022333332221 1111 11 2334568999999999 88766643
No 96
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=97.87 E-value=1.6e-05 Score=71.58 Aligned_cols=52 Identities=15% Similarity=0.103 Sum_probs=41.8
Q ss_pred cCCCCcccEEEec-cccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 90 LFPHNFLDFVYSS-YALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 90 l~P~~sv~~~~Ss-~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
++|++++|+|+++ .++|++...... .+++..+|+.-++-|+|||++++....
T Consensus 125 ~~~~~~fD~V~~~g~~l~~~~~~~~~---------------~~~~~~~l~~~~~~LkpgG~l~~~~~~ 177 (293)
T 3thr_A 125 VPAGDGFDAVICLGNSFAHLPDSKGD---------------QSEHRLALKNIASMVRPGGLLVIDHRN 177 (293)
T ss_dssp SCCTTCEEEEEECTTCGGGSCCSSSS---------------SHHHHHHHHHHHHTEEEEEEEEEEEEC
T ss_pred cccCCCeEEEEEcChHHhhcCccccC---------------HHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence 3789999999999 899997653321 245778889999999999999998753
No 97
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=97.84 E-value=3.3e-05 Score=68.73 Aligned_cols=102 Identities=14% Similarity=0.228 Sum_probs=61.3
Q ss_pred cCCCCcccEEEecc-ccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCC--Cch
Q 045960 90 LFPHNFLDFVYSSY-ALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHAT--PGE 166 (300)
Q Consensus 90 l~P~~sv~~~~Ss~-alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~--~~~ 166 (300)
-+|++++|+|+++. .+||... ...+|+.-.+-|+|||++++...+....... ...
T Consensus 109 ~~~~~~fD~v~~~~~~~~~~~~----------------------~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~~~~ 166 (260)
T 2avn_A 109 PFPSGAFEAVLALGDVLSYVEN----------------------KDKAFSEIRRVLVPDGLLIATVDNFYTFLQQMIEKD 166 (260)
T ss_dssp CSCTTCEEEEEECSSHHHHCSC----------------------HHHHHHHHHHHEEEEEEEEEEEEBHHHHHHHHHHTT
T ss_pred CCCCCCEEEEEEcchhhhcccc----------------------HHHHHHHHHHHcCCCeEEEEEeCChHHHHHHhhcch
Confidence 37889999999986 5678443 4667778889999999999998765310000 000
Q ss_pred HHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEE
Q 045960 167 PMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETF 220 (300)
Q Consensus 167 ~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~ 220 (300)
.. ..+......|...... ..+ .++.++.+++|++++ +| |++.++...
T Consensus 167 ~~-~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~~l~~l---aG-f~~~~~~~~ 213 (260)
T 2avn_A 167 AW-DQITRFLKTQTTSVGT-TLF-SFNSYAFKPEDLDSL---EG-FETVDIRGI 213 (260)
T ss_dssp CH-HHHHHHHHHCEEEEEC-SSE-EEEEECBCGGGGSSC---TT-EEEEEEEEE
T ss_pred hH-HHHHHHHhccccccCC-Cce-eEEEeccCHHHHHHh---cC-ceEEEEECC
Confidence 01 1122223334322110 011 223347899999988 77 998887765
No 98
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=97.81 E-value=8.8e-05 Score=66.52 Aligned_cols=105 Identities=15% Similarity=0.049 Sum_probs=64.2
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCc-eeeee
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGS-CFVAA 81 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~-~f~~~ 81 (300)
+|+|+||++|..+..+...+ | |+=.||--|.- +.....+.+. -.+.++ ..+.+
T Consensus 80 ~VldlG~G~G~~~~~la~~V-----------G---~~G~V~avD~s-----------~~~~~~l~~~-a~~~~ni~~V~~ 133 (233)
T 4df3_A 80 RILYLGIASGTTASHMSDII-----------G---PRGRIYGVEFA-----------PRVMRDLLTV-VRDRRNIFPILG 133 (233)
T ss_dssp EEEEETCTTSHHHHHHHHHH-----------C---TTCEEEEEECC-----------HHHHHHHHHH-STTCTTEEEEES
T ss_pred EEEEecCcCCHHHHHHHHHh-----------C---CCceEEEEeCC-----------HHHHHHHHHh-hHhhcCeeEEEE
Confidence 79999999999887654322 2 23455555421 1111111111 111123 44556
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
..+....--++.+++|++|+..+.|| |-..++..-.+-|||||++++.+-.+
T Consensus 134 d~~~p~~~~~~~~~vDvVf~d~~~~~------------------------~~~~~l~~~~r~LKpGG~lvI~ik~r 185 (233)
T 4df3_A 134 DARFPEKYRHLVEGVDGLYADVAQPE------------------------QAAIVVRNARFFLRDGGYMLMAIKAR 185 (233)
T ss_dssp CTTCGGGGTTTCCCEEEEEECCCCTT------------------------HHHHHHHHHHHHEEEEEEEEEEEECC
T ss_pred eccCccccccccceEEEEEEeccCCh------------------------hHHHHHHHHHHhccCCCEEEEEEecc
Confidence 66666665677889999998777766 12456666778899999999987444
No 99
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=97.75 E-value=4.3e-05 Score=69.04 Aligned_cols=90 Identities=16% Similarity=0.231 Sum_probs=67.0
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHH
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLM 170 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~ 170 (300)
+|++++|+|+|+.+|||+..- ..|+..+|+.-++-|||||+|++...-... ...
T Consensus 170 ~~~~~fD~V~~~~~l~~~~~~------------------~~~~~~~l~~~~r~LkpGG~l~~~~~~~~~--~~~------ 223 (289)
T 2g72_A 170 PAPLPADALVSAFCLEAVSPD------------------LASFQRALDHITTLLRPGGHLLLIGALEES--WYL------ 223 (289)
T ss_dssp SSCSSEEEEEEESCHHHHCSS------------------HHHHHHHHHHHHTTEEEEEEEEEEEEESCC--EEE------
T ss_pred cCCCCCCEEEehhhhhhhcCC------------------HHHHHHHHHHHHHhcCCCCEEEEEEecCcc--eEE------
Confidence 678899999999999996641 235788899999999999999997422111 000
Q ss_pred HHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEeec
Q 045960 171 VLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNVS 223 (300)
Q Consensus 171 al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~~ 223 (300)
...- ..|.++.+.+|+++++++.| |++.+++.+..+
T Consensus 224 ---------------~~~~-~~~~~~~~~~~l~~~l~~aG-f~~~~~~~~~~~ 259 (289)
T 2g72_A 224 ---------------AGEA-RLTVVPVSEEEVREALVRSG-YKVRDLRTYIMP 259 (289)
T ss_dssp ---------------ETTE-EEECCCCCHHHHHHHHHHTT-EEEEEEEEEECC
T ss_pred ---------------cCCe-eeeeccCCHHHHHHHHHHcC-CeEEEeeEeecc
Confidence 0112 34567789999999999999 999998877643
No 100
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=97.68 E-value=0.00023 Score=59.04 Aligned_cols=52 Identities=10% Similarity=0.124 Sum_probs=40.1
Q ss_pred CccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 84 GSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
+.+.. .+|++++|+++++..+||- ..+...+|+.-.+-|+|||++++.....
T Consensus 109 ~d~~~-~~~~~~~D~v~~~~~~~~~---------------------~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 160 (194)
T 1dus_A 109 SDLYE-NVKDRKYNKIITNPPIRAG---------------------KEVLHRIIEEGKELLKDNGEIWVVIQTK 160 (194)
T ss_dssp CSTTT-TCTTSCEEEEEECCCSTTC---------------------HHHHHHHHHHHHHHEEEEEEEEEEEEST
T ss_pred Cchhc-ccccCCceEEEECCCcccc---------------------hhHHHHHHHHHHHHcCCCCEEEEEECCC
Confidence 34444 4567899999999999881 2346778888899999999999998654
No 101
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=97.62 E-value=9e-05 Score=60.28 Aligned_cols=56 Identities=14% Similarity=0.102 Sum_probs=39.4
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
+|++++|+++++..+||... +. ... .........+|+.-.+-|+|||++++.....
T Consensus 84 ~~~~~~D~i~~~~~~~~~~~-------~~-~~~---~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~~ 139 (180)
T 1ej0_A 84 VGDSKVQVVMSDMAPNMSGT-------PA-VDI---PRAMYLVELALEMCRDVLAPGGSFVVKVFQG 139 (180)
T ss_dssp HTTCCEEEEEECCCCCCCSC-------HH-HHH---HHHHHHHHHHHHHHHHHEEEEEEEEEEEESS
T ss_pred CCCCceeEEEECCCccccCC-------Cc-cch---HHHHHHHHHHHHHHHHHcCCCcEEEEEEecC
Confidence 67889999999999999654 10 000 0012223678888888999999999877644
No 102
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=97.61 E-value=0.00026 Score=61.47 Aligned_cols=129 Identities=16% Similarity=0.155 Sum_probs=70.9
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+... .|..+|+.-|.-.. .+-. ....... .+ ..++-+ +
T Consensus 41 ~vLDiGcG~G~~~~~la~~---------------~p~~~v~giD~s~~---~l~~----a~~~~~~-~~--~~nv~~--~ 93 (213)
T 2fca_A 41 IHIEVGTGKGQFISGMAKQ---------------NPDINYIGIELFKS---VIVT----AVQKVKD-SE--AQNVKL--L 93 (213)
T ss_dssp EEEEECCTTSHHHHHHHHH---------------CTTSEEEEECSCHH---HHHH----HHHHHHH-SC--CSSEEE--E
T ss_pred eEEEEecCCCHHHHHHHHH---------------CCCCCEEEEEechH---HHHH----HHHHHHH-cC--CCCEEE--E
Confidence 6999999999988765321 13466676663211 0000 0011111 11 123222 2
Q ss_pred CCccc--cccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCC
Q 045960 83 PGSFY--TRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNF 160 (300)
Q Consensus 83 pgSFy--~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~ 160 (300)
-+... ...+|++++|.++++.+.+|...-- ... +-....||+.-++-|+|||++++.....
T Consensus 94 ~~d~~~l~~~~~~~~~d~v~~~~~~p~~~~~~-------~~~-------rl~~~~~l~~~~~~LkpgG~l~~~td~~--- 156 (213)
T 2fca_A 94 NIDADTLTDVFEPGEVKRVYLNFSDPWPKKRH-------EKR-------RLTYSHFLKKYEEVMGKGGSIHFKTDNR--- 156 (213)
T ss_dssp CCCGGGHHHHCCTTSCCEEEEESCCCCCSGGG-------GGG-------STTSHHHHHHHHHHHTTSCEEEEEESCH---
T ss_pred eCCHHHHHhhcCcCCcCEEEEECCCCCcCccc-------ccc-------ccCcHHHHHHHHHHcCCCCEEEEEeCCH---
Confidence 23332 2458899999999988888854200 000 0012567788888999999999876211
Q ss_pred CCCCchHHHHHHHHHHHcCC
Q 045960 161 HATPGEPMLMVLKDMISEGL 180 (300)
Q Consensus 161 ~~~~~~~l~~al~~mv~eG~ 180 (300)
+....++..|.+.|.
T Consensus 157 -----~~~~~~~~~~~~~g~ 171 (213)
T 2fca_A 157 -----GLFEYSLKSFSEYGL 171 (213)
T ss_dssp -----HHHHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHHHHCCC
Confidence 234455555556664
No 103
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=97.57 E-value=0.00049 Score=58.15 Aligned_cols=55 Identities=9% Similarity=0.146 Sum_probs=37.0
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
+|++++|+|+|+.++||... .. ...+ +..+....+|+.-.+-|+|||+|++.+..
T Consensus 102 ~~~~~fD~v~~~~~~~~~g~--------~~-~d~~--~~~~~~~~~l~~~~~~LkpgG~lv~~~~~ 156 (201)
T 2plw_A 102 LQDKKIDIILSDAAVPCIGN--------KI-DDHL--NSCELTLSITHFMEQYINIGGTYIVKMYL 156 (201)
T ss_dssp HTTCCEEEEEECCCCCCCSC--------HH-HHHH--HHHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred cCCCcccEEEeCCCcCCCCC--------cc-cCHH--HHHHHHHHHHHHHHHHccCCCEEEEEEeC
Confidence 67889999999999999422 00 0000 01122345777778889999999987654
No 104
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=97.53 E-value=0.00038 Score=64.38 Aligned_cols=87 Identities=18% Similarity=0.256 Sum_probs=55.9
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHH
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLM 170 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~ 170 (300)
+|..++|++.+..++|||.+ +|..-++-|+|||++++.+- +.-+... +.+.
T Consensus 147 l~~~~fD~v~~d~sf~sl~~-------------------------vL~e~~rvLkpGG~lv~lvk--Pqfe~~~-~~~~- 197 (291)
T 3hp7_A 147 FTEGLPSFASIDVSFISLNL-------------------------ILPALAKILVDGGQVVALVK--PQFEAGR-EQIG- 197 (291)
T ss_dssp CTTCCCSEEEECCSSSCGGG-------------------------THHHHHHHSCTTCEEEEEEC--GGGTSCG-GGCC-
T ss_pred CCCCCCCEEEEEeeHhhHHH-------------------------HHHHHHHHcCcCCEEEEEEC--cccccCh-hhcC-
Confidence 57778999999999998644 45556788999999999741 1110000 0000
Q ss_pred HHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 171 VLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 171 al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
..|.+.. .-.+..+.+++.+.+++.| |.+..+..-.
T Consensus 198 ------~~G~vrd--------~~~~~~~~~~v~~~~~~~G-f~v~~~~~sp 233 (291)
T 3hp7_A 198 ------KNGIVRE--------SSIHEKVLETVTAFAVDYG-FSVKGLDFSP 233 (291)
T ss_dssp -------CCCCCC--------HHHHHHHHHHHHHHHHHTT-EEEEEEEECS
T ss_pred ------CCCccCC--------HHHHHHHHHHHHHHHHHCC-CEEEEEEECC
Confidence 1233321 1224457899999999998 9988876543
No 105
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=97.53 E-value=0.00033 Score=65.72 Aligned_cols=103 Identities=15% Similarity=0.130 Sum_probs=65.3
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+.+. +..+|+.-|+. . .-...+.. ... .+. .+ -+..+
T Consensus 69 ~VLDvGcG~G~~~~~la~~----------------g~~~v~gvD~s-~-~l~~a~~~------~~~-~~~--~~-~v~~~ 120 (349)
T 3q7e_A 69 VVLDVGSGTGILCMFAAKA----------------GARKVIGIECS-S-ISDYAVKI------VKA-NKL--DH-VVTII 120 (349)
T ss_dssp EEEEESCTTSHHHHHHHHT----------------TCSEEEEEECS-T-HHHHHHHH------HHH-TTC--TT-TEEEE
T ss_pred EEEEEeccchHHHHHHHHC----------------CCCEEEEECcH-H-HHHHHHHH------HHH-cCC--CC-cEEEE
Confidence 7999999999877755421 12578888875 2 32222211 111 111 11 01223
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEE
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVL 152 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl 152 (300)
-++...--+|.+++|+++|....|++...+ ++..+|..+.+-|+|||+|+.
T Consensus 121 ~~d~~~~~~~~~~fD~Iis~~~~~~l~~~~-------------------~~~~~l~~~~r~LkpgG~li~ 171 (349)
T 3q7e_A 121 KGKVEEVELPVEKVDIIISEWMGYCLFYES-------------------MLNTVLHARDKWLAPDGLIFP 171 (349)
T ss_dssp ESCTTTCCCSSSCEEEEEECCCBBTBTBTC-------------------CHHHHHHHHHHHEEEEEEEES
T ss_pred ECcHHHccCCCCceEEEEEccccccccCch-------------------hHHHHHHHHHHhCCCCCEEcc
Confidence 344444457889999999988766655433 367889999999999999973
No 106
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=97.51 E-value=0.00056 Score=58.74 Aligned_cols=153 Identities=9% Similarity=0.015 Sum_probs=81.5
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+... .|..+|+.-|+-..=...+.+..... . ...+ .+++- .
T Consensus 29 ~~vLDiGcG~G~~~~~la~~---------------~p~~~v~gvD~s~~~l~~~~~~a~~~---~-~~~~--~~~v~--~ 85 (218)
T 3mq2_A 29 DVVLDVGTGDGKHPYKVARQ---------------NPSRLVVALDADKSRMEKISAKAAAK---P-AKGG--LPNLL--Y 85 (218)
T ss_dssp EEEEEESCTTCHHHHHHHHH---------------CTTEEEEEEESCGGGGHHHHHHHTSC---G-GGTC--CTTEE--E
T ss_pred CEEEEecCCCCHHHHHHHHH---------------CCCCEEEEEECCHHHHHHHHHHHHHh---h-hhcC--CCceE--E
Confidence 37999999999998765431 13467888875432222221111000 0 0001 12221 1
Q ss_pred cCCccccccCCCCcccEEE---eccccc--cccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 82 SPGSFYTRLFPHNFLDFVY---SSYALH--WLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~---Ss~alH--WLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
+-+....--+++++ |.++ ++..+| |+.. ...+|+.-++-|||||++++.+..
T Consensus 86 ~~~d~~~l~~~~~~-d~v~~~~~~~~~~~~~~~~----------------------~~~~l~~~~~~LkpgG~l~~~~~~ 142 (218)
T 3mq2_A 86 LWATAERLPPLSGV-GELHVLMPWGSLLRGVLGS----------------------SPEMLRGMAAVCRPGASFLVALNL 142 (218)
T ss_dssp EECCSTTCCSCCCE-EEEEEESCCHHHHHHHHTS----------------------SSHHHHHHHHTEEEEEEEEEEEEG
T ss_pred EecchhhCCCCCCC-CEEEEEccchhhhhhhhcc----------------------HHHHHHHHHHHcCCCcEEEEEecc
Confidence 23444443355655 5555 333332 4322 356677788899999999997643
Q ss_pred cCCCCCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEee
Q 045960 157 NDNFHATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFNV 222 (300)
Q Consensus 157 ~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~~ 222 (300)
..-... +. ++... ..+......++++..+++.| |+|.+++.+..
T Consensus 143 ~~~~~~------------------~~--~~~~~-~~~~~~~~~~~l~~~l~~aG-f~i~~~~~~~~ 186 (218)
T 3mq2_A 143 HAWRPS------------------VP--EVGEH-PEPTPDSADEWLAPRYAEAG-WKLADCRYLEP 186 (218)
T ss_dssp GGBTTB------------------CG--GGTTC-CCCCHHHHHHHHHHHHHHTT-EEEEEEEEECH
T ss_pred cccccc------------------cc--ccccC-CccchHHHHHHHHHHHHHcC-CCceeeeccch
Confidence 321110 00 11111 11112223566888999998 99999988743
No 107
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=97.49 E-value=0.00048 Score=65.73 Aligned_cols=105 Identities=15% Similarity=0.137 Sum_probs=68.4
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+... + .+|+..|.- -..+- ........ .+. . +..+
T Consensus 236 ~VLDlGcG~G~~~~~la~~------------g-----~~V~gvDis---~~al~----~A~~n~~~-~~~--~---v~~~ 285 (381)
T 3dmg_A 236 QVLDLGAGYGALTLPLARM------------G-----AEVVGVEDD---LASVL----SLQKGLEA-NAL--K---AQAL 285 (381)
T ss_dssp EEEEETCTTSTTHHHHHHT------------T-----CEEEEEESB---HHHHH----HHHHHHHH-TTC--C---CEEE
T ss_pred EEEEEeeeCCHHHHHHHHc------------C-----CEEEEEECC---HHHHH----HHHHHHHH-cCC--C---eEEE
Confidence 7999999999999866431 1 366666641 11111 11111111 111 1 2224
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
-+....-..+++++|+|+|+..+||..... ..+...+|+.-.+-|+|||++++..
T Consensus 286 ~~D~~~~~~~~~~fD~Ii~npp~~~~~~~~-----------------~~~~~~~l~~~~~~LkpGG~l~iv~ 340 (381)
T 3dmg_A 286 HSDVDEALTEEARFDIIVTNPPFHVGGAVI-----------------LDVAQAFVNVAAARLRPGGVFFLVS 340 (381)
T ss_dssp ECSTTTTSCTTCCEEEEEECCCCCTTCSSC-----------------CHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EcchhhccccCCCeEEEEECCchhhccccc-----------------HHHHHHHHHHHHHhcCcCcEEEEEE
Confidence 466666666778999999999999965543 2356788888889999999999875
No 108
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=97.46 E-value=0.0011 Score=56.40 Aligned_cols=47 Identities=9% Similarity=0.170 Sum_probs=34.7
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
+.+.+.. ++++++|+++++..+|| +..+|+.-.+-|+|||++++...
T Consensus 114 ~~~d~~~--~~~~~fD~i~~~~~~~~-------------------------~~~~l~~~~~~L~~gG~l~~~~~ 160 (205)
T 3grz_A 114 QKTSLLA--DVDGKFDLIVANILAEI-------------------------LLDLIPQLDSHLNEDGQVIFSGI 160 (205)
T ss_dssp EESSTTT--TCCSCEEEEEEESCHHH-------------------------HHHHGGGSGGGEEEEEEEEEEEE
T ss_pred Eeccccc--cCCCCceEEEECCcHHH-------------------------HHHHHHHHHHhcCCCCEEEEEec
Confidence 3344443 35689999999988777 34566777788999999998643
No 109
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=97.39 E-value=0.00031 Score=59.45 Aligned_cols=62 Identities=19% Similarity=0.084 Sum_probs=42.3
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecC
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYND 158 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~ 158 (300)
-+|++++|+|+++.++|.+.........+. .....|...+|+.-.+-|+|||++++...+.+
T Consensus 102 ~~~~~~fD~v~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~ 163 (215)
T 2pxx_A 102 DFPSASFDVVLEKGTLDALLAGERDPWTVS-------SEGVHTVDQVLSEVSRVLVPGGRFISMTSAAP 163 (215)
T ss_dssp CSCSSCEEEEEEESHHHHHTTTCSCTTSCC-------HHHHHHHHHHHHHHHHHEEEEEEEEEEESCCH
T ss_pred CCCCCcccEEEECcchhhhccccccccccc-------cchhHHHHHHHHHHHHhCcCCCEEEEEeCCCc
Confidence 467889999999999987642111000000 11234678888888999999999999886553
No 110
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=97.38 E-value=0.00067 Score=56.60 Aligned_cols=52 Identities=13% Similarity=0.156 Sum_probs=30.2
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
++++++|+++++ ++|+..-... +. ....+...+|+.-.+-|+|||++++...
T Consensus 85 ~~~~~fD~v~~~--~~~~~~~~~~------~~-----~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 85 YVREPIRAAIFN--LGYLPSADKS------VI-----TKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp TCCSCEEEEEEE--EC----------------------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hccCCcCEEEEe--CCCCCCcchh------cc-----cChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 457889999876 3443221100 00 0123445667777889999999998764
No 111
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=97.37 E-value=0.00035 Score=59.57 Aligned_cols=47 Identities=17% Similarity=0.116 Sum_probs=35.9
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
+-+.....+.+.+++|+++++.++||+ |+ .-.+-|+|||++++.+..
T Consensus 130 ~~~d~~~~~~~~~~~D~i~~~~~~~~~---~~-------------------------~~~~~L~pgG~lv~~~~~ 176 (210)
T 3lbf_A 130 RHGDGWQGWQARAPFDAIIVTAAPPEI---PT-------------------------ALMTQLDEGGILVLPVGE 176 (210)
T ss_dssp EESCGGGCCGGGCCEEEEEESSBCSSC---CT-------------------------HHHHTEEEEEEEEEEECS
T ss_pred EECCcccCCccCCCccEEEEccchhhh---hH-------------------------HHHHhcccCcEEEEEEcC
Confidence 445566666677899999999999994 42 124679999999999865
No 112
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=97.37 E-value=0.00028 Score=66.96 Aligned_cols=104 Identities=19% Similarity=0.228 Sum_probs=66.0
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+... | .-+|+.-|.. +.-...+..- .. .+.. .++ ..+
T Consensus 66 ~VLDlGcGtG~ls~~la~~------------g----~~~V~gvD~s--~~~~~a~~~~------~~-~~~~-~~v--~~~ 117 (376)
T 3r0q_C 66 TVLDVGTGSGILAIWSAQA------------G----ARKVYAVEAT--KMADHARALV------KA-NNLD-HIV--EVI 117 (376)
T ss_dssp EEEEESCTTTHHHHHHHHT------------T----CSEEEEEESS--TTHHHHHHHH------HH-TTCT-TTE--EEE
T ss_pred EEEEeccCcCHHHHHHHhc------------C----CCEEEEEccH--HHHHHHHHHH------HH-cCCC-CeE--EEE
Confidence 7999999999887754321 2 1378888874 4433333211 11 1110 111 223
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
-+....-.+| +++|+++|....|++... .++..+|+.+.+=|+|||+|++.-
T Consensus 118 ~~d~~~~~~~-~~~D~Iv~~~~~~~l~~e-------------------~~~~~~l~~~~~~LkpgG~li~~~ 169 (376)
T 3r0q_C 118 EGSVEDISLP-EKVDVIISEWMGYFLLRE-------------------SMFDSVISARDRWLKPTGVMYPSH 169 (376)
T ss_dssp ESCGGGCCCS-SCEEEEEECCCBTTBTTT-------------------CTHHHHHHHHHHHEEEEEEEESSE
T ss_pred ECchhhcCcC-CcceEEEEcChhhcccch-------------------HHHHHHHHHHHhhCCCCeEEEEec
Confidence 3444444455 899999998878887652 246788999999999999997653
No 113
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=97.36 E-value=0.00034 Score=61.14 Aligned_cols=54 Identities=17% Similarity=0.206 Sum_probs=36.6
Q ss_pred cCCccccc--cCCCCcccEEEe-ccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEE
Q 045960 82 SPGSFYTR--LFPHNFLDFVYS-SYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLT 153 (300)
Q Consensus 82 vpgSFy~~--l~P~~sv~~~~S-s~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~ 153 (300)
+-+....- -+|++++|+|++ .+++++ .... ..++..+|+.-.+-|||||+|++.
T Consensus 113 ~~~d~~~~~~~~~~~~fD~V~~d~~~~~~-~~~~-----------------~~~~~~~l~~~~r~LkpgG~l~~~ 169 (236)
T 1zx0_A 113 LKGLWEDVAPTLPDGHFDGILYDTYPLSE-ETWH-----------------THQFNFIKNHAFRLLKPGGVLTYC 169 (236)
T ss_dssp EESCHHHHGGGSCTTCEEEEEECCCCCBG-GGTT-----------------THHHHHHHHTHHHHEEEEEEEEEC
T ss_pred EecCHHHhhcccCCCceEEEEECCcccch-hhhh-----------------hhhHHHHHHHHHHhcCCCeEEEEE
Confidence 33444443 478899999999 776632 2211 234567788888999999998764
No 114
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=97.34 E-value=0.0014 Score=57.32 Aligned_cols=104 Identities=18% Similarity=0.224 Sum_probs=60.2
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+... + .+|+..|+-.. .-... ...... .+. + +..
T Consensus 43 ~~vLDlGcG~G~~~~~l~~~------------~-----~~v~gvD~s~~-~l~~a------~~~~~~-~~~---~--v~~ 92 (252)
T 1wzn_A 43 RRVLDLACGTGIPTLELAER------------G-----YEVVGLDLHEE-MLRVA------RRKAKE-RNL---K--IEF 92 (252)
T ss_dssp CEEEEETCTTCHHHHHHHHT------------T-----CEEEEEESCHH-HHHHH------HHHHHH-TTC---C--CEE
T ss_pred CEEEEeCCCCCHHHHHHHHC------------C-----CeEEEEECCHH-HHHHH------HHHHHh-cCC---c--eEE
Confidence 37999999999987755321 1 35666664211 00011 111111 111 1 112
Q ss_pred cCCccccccCCCCcccEEEecc-ccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSY-ALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~-alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
+.+.+..-- +++++|+|++.. ++|+++ ..|...+|+.-++-|+|||++++.+..
T Consensus 93 ~~~d~~~~~-~~~~fD~v~~~~~~~~~~~--------------------~~~~~~~l~~~~~~L~pgG~li~~~~~ 147 (252)
T 1wzn_A 93 LQGDVLEIA-FKNEFDAVTMFFSTIMYFD--------------------EEDLRKLFSKVAEALKPGGVFITDFPC 147 (252)
T ss_dssp EESCGGGCC-CCSCEEEEEECSSGGGGSC--------------------HHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred EECChhhcc-cCCCccEEEEcCCchhcCC--------------------HHHHHHHHHHHHHHcCCCeEEEEeccc
Confidence 334444322 347899999874 455532 235778888889999999999988753
No 115
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=97.34 E-value=0.00055 Score=66.55 Aligned_cols=49 Identities=20% Similarity=0.318 Sum_probs=33.7
Q ss_pred cCCccccccCCC--CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEE
Q 045960 82 SPGSFYTRLFPH--NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLT 153 (300)
Q Consensus 82 vpgSFy~~l~P~--~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~ 153 (300)
+-|.|..--++. .++|+|+++..++| | |....|....+.|||||++|+.
T Consensus 237 i~GD~~~lp~~d~~~~aDVVf~Nn~~F~----p-------------------dl~~aL~Ei~RvLKPGGrIVss 287 (438)
T 3uwp_A 237 ERGDFLSEEWRERIANTSVIFVNNFAFG----P-------------------EVDHQLKERFANMKEGGRIVSS 287 (438)
T ss_dssp EECCTTSHHHHHHHHTCSEEEECCTTCC----H-------------------HHHHHHHHHHTTSCTTCEEEES
T ss_pred EECcccCCccccccCCccEEEEcccccC----c-------------------hHHHHHHHHHHcCCCCcEEEEe
Confidence 445555433333 46899999888766 1 3455566678899999999876
No 116
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=97.29 E-value=9.3e-05 Score=65.79 Aligned_cols=67 Identities=12% Similarity=0.188 Sum_probs=42.1
Q ss_pred HHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEE
Q 045960 136 FLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQ 215 (300)
Q Consensus 136 fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~ 215 (300)
+|+.-.+-|+|||++++.+ .+ .....+..+-..|++.. ...+..+.+|+.+.+++.| |++.
T Consensus 119 ~l~~i~rvLkpgG~lv~~~--~p--------~~e~~~~~~~~~G~~~d--------~~~~~~~~~~l~~~l~~aG-f~v~ 179 (232)
T 3opn_A 119 ILPPLYEILEKNGEVAALI--KP--------QFEAGREQVGKNGIIRD--------PKVHQMTIEKVLKTATQLG-FSVK 179 (232)
T ss_dssp THHHHHHHSCTTCEEEEEE--CH--------HHHSCHHHHC-CCCCCC--------HHHHHHHHHHHHHHHHHHT-EEEE
T ss_pred HHHHHHHhccCCCEEEEEE--Cc--------ccccCHHHhCcCCeecC--------cchhHHHHHHHHHHHHHCC-CEEE
Confidence 5566778899999999965 11 11222222223354321 1123348999999999999 9998
Q ss_pred EEEEEe
Q 045960 216 EVETFN 221 (300)
Q Consensus 216 ~~e~~~ 221 (300)
.++...
T Consensus 180 ~~~~~p 185 (232)
T 3opn_A 180 GLTFSP 185 (232)
T ss_dssp EEEECS
T ss_pred EEEEcc
Confidence 877553
No 117
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=97.27 E-value=0.0014 Score=55.10 Aligned_cols=47 Identities=13% Similarity=-0.024 Sum_probs=35.7
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHH--hhccCceeEEEEeecC
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSE--ELKSQGRMVLTLLYND 158 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~--EL~~GG~~vl~~~g~~ 158 (300)
+|++++|+++++..+||.. .++..+|+.-.+ -|+|||++++....+.
T Consensus 109 ~~~~~fD~i~~~~p~~~~~---------------------~~~~~~l~~~~~~~~L~pgG~l~~~~~~~~ 157 (189)
T 3p9n_A 109 GTTSPVDLVLADPPYNVDS---------------------ADVDAILAALGTNGWTREGTVAVVERATTC 157 (189)
T ss_dssp CCSSCCSEEEECCCTTSCH---------------------HHHHHHHHHHHHSSSCCTTCEEEEEEETTS
T ss_pred ccCCCccEEEECCCCCcch---------------------hhHHHHHHHHHhcCccCCCeEEEEEecCCC
Confidence 4678999999998888831 245566666666 8999999999886554
No 118
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=97.24 E-value=0.001 Score=55.42 Aligned_cols=57 Identities=11% Similarity=0.026 Sum_probs=35.1
Q ss_pred CccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 84 GSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
+++.. .+|++++|+++|+..+||.+..+. +.. ..|...+++.-.+.| |||++++...
T Consensus 68 ~d~~~-~~~~~~fD~i~~n~~~~~~~~~~~-~~~------------~~~~~~~~~~~~~~l-pgG~l~~~~~ 124 (170)
T 3q87_B 68 ADLLC-SINQESVDVVVFNPPYVPDTDDPI-IGG------------GYLGREVIDRFVDAV-TVGMLYLLVI 124 (170)
T ss_dssp CSTTT-TBCGGGCSEEEECCCCBTTCCCTT-TBC------------CGGGCHHHHHHHHHC-CSSEEEEEEE
T ss_pred CChhh-hcccCCCCEEEECCCCccCCcccc-ccC------------CcchHHHHHHHHhhC-CCCEEEEEEe
Confidence 44444 456689999999999999766321 110 111223344444555 9999988764
No 119
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=97.24 E-value=0.00035 Score=61.21 Aligned_cols=111 Identities=12% Similarity=0.115 Sum_probs=63.9
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+.. . .|...|+--|.-.+ .+-. ....... .+ ..++- -+
T Consensus 37 ~vLDiGcG~G~~~~~lA~--------~-------~p~~~v~giD~s~~---~l~~----a~~~~~~-~~--l~nv~--~~ 89 (218)
T 3dxy_A 37 VTLEIGFGMGASLVAMAK--------D-------RPEQDFLGIEVHSP---GVGA----CLASAHE-EG--LSNLR--VM 89 (218)
T ss_dssp EEEEESCTTCHHHHHHHH--------H-------CTTSEEEEECSCHH---HHHH----HHHHHHH-TT--CSSEE--EE
T ss_pred eEEEEeeeChHHHHHHHH--------H-------CCCCeEEEEEecHH---HHHH----HHHHHHH-hC--CCcEE--EE
Confidence 699999999988775532 1 23467777775321 1111 0111111 11 12322 23
Q ss_pred CCcc---ccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 83 PGSF---YTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 83 pgSF---y~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
-+.. ....+|++++|.+++++...|-..--. . +.. --..||+.-++-|||||++++..
T Consensus 90 ~~Da~~~l~~~~~~~~~d~v~~~~~~p~~~~~~~--------~----rr~--~~~~~l~~~~r~LkpGG~l~i~t 150 (218)
T 3dxy_A 90 CHDAVEVLHKMIPDNSLRMVQLFFPDPWHKARHN--------K----RRI--VQVPFAELVKSKLQLGGVFHMAT 150 (218)
T ss_dssp CSCHHHHHHHHSCTTCEEEEEEESCCCCCSGGGG--------G----GSS--CSHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECCHHHHHHHHcCCCChheEEEeCCCCccchhhh--------h----hhh--hhHHHHHHHHHHcCCCcEEEEEe
Confidence 3333 334689999999999999998433000 0 000 00247888889999999998876
No 120
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=97.23 E-value=0.00072 Score=55.64 Aligned_cols=101 Identities=15% Similarity=0.110 Sum_probs=58.6
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+... .|..+|+..|.-..=-.. ..+... ..+.. .++++.
T Consensus 27 ~~vldiG~G~G~~~~~l~~~---------------~~~~~v~~vD~~~~~~~~-------a~~~~~-~~~~~-~~~~~~- 81 (178)
T 3hm2_A 27 ETLWDIGGGSGSIAIEWLRS---------------TPQTTAVCFEISEERRER-------ILSNAI-NLGVS-DRIAVQ- 81 (178)
T ss_dssp EEEEEESTTTTHHHHHHHTT---------------SSSEEEEEECSCHHHHHH-------HHHHHH-TTTCT-TSEEEE-
T ss_pred CeEEEeCCCCCHHHHHHHHH---------------CCCCeEEEEeCCHHHHHH-------HHHHHH-HhCCC-CCEEEe-
Confidence 37999999999877754321 134778888753211110 011111 11110 144333
Q ss_pred cCCccccccCCC--CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 82 SPGSFYTRLFPH--NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 82 vpgSFy~~l~P~--~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
+.... -+|. +++|+++++.++|| . .+|+.-.+-|+|||++++....
T Consensus 82 --~d~~~-~~~~~~~~~D~i~~~~~~~~-~-------------------------~~l~~~~~~L~~gG~l~~~~~~ 129 (178)
T 3hm2_A 82 --QGAPR-AFDDVPDNPDVIFIGGGLTA-P-------------------------GVFAAAWKRLPVGGRLVANAVT 129 (178)
T ss_dssp --CCTTG-GGGGCCSCCSEEEECC-TTC-T-------------------------THHHHHHHTCCTTCEEEEEECS
T ss_pred --cchHh-hhhccCCCCCEEEECCcccH-H-------------------------HHHHHHHHhcCCCCEEEEEeec
Confidence 33333 4455 89999999999998 1 2445566789999999987643
No 121
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=97.23 E-value=0.0025 Score=55.98 Aligned_cols=72 Identities=17% Similarity=0.277 Sum_probs=42.0
Q ss_pred HHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCC
Q 045960 132 DFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGS 211 (300)
Q Consensus 132 D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gs 211 (300)
+...+|+.-++-|||||++++......... .+... ..+ .. . ..|.|++. +|+.+.+++.|
T Consensus 117 ~~~~~l~~~~r~LkpGG~l~i~~~~~~~~~-----~~~~~-----~~~------~~-~-~~~~~~~~-~el~~~l~~aG- 176 (225)
T 3p2e_A 117 PNRDILSNVADLAKKEAHFEFVTTYSDSYE-----EAEIK-----KRG------LP-L-LSKAYFLS-EQYKAELSNSG- 176 (225)
T ss_dssp TCHHHHHHHHTTEEEEEEEEEEECCCC--------------------------------CCHHHHHS-HHHHHHHHHHT-
T ss_pred chHHHHHHHHHhcCCCcEEEEEEeccccch-----hchhh-----hcC------CC-C-CChhhcch-HHHHHHHHHcC-
Confidence 345678888899999999999542222110 00000 001 01 1 12334433 47999999999
Q ss_pred eeEEEEEEEeec
Q 045960 212 FDIQEVETFNVS 223 (300)
Q Consensus 212 F~I~~~e~~~~~ 223 (300)
|+|..++.+...
T Consensus 177 f~v~~~~~~~~~ 188 (225)
T 3p2e_A 177 FRIDDVKELDNE 188 (225)
T ss_dssp CEEEEEEEECHH
T ss_pred CCeeeeeecCHH
Confidence 999999988644
No 122
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=97.16 E-value=0.0018 Score=59.10 Aligned_cols=40 Identities=13% Similarity=0.229 Sum_probs=32.8
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEE
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVL 152 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl 152 (300)
.+++|+|+|.+.|||+.. .+....|+.-++-|+|||.|++
T Consensus 211 ~~~fDlI~crnvliyf~~--------------------~~~~~vl~~~~~~L~pgG~L~l 250 (274)
T 1af7_A 211 PGPFDAIFCRNVMIYFDK--------------------TTQEDILRRFVPLLKPDGLLFA 250 (274)
T ss_dssp CCCEEEEEECSSGGGSCH--------------------HHHHHHHHHHGGGEEEEEEEEE
T ss_pred CCCeeEEEECCchHhCCH--------------------HHHHHHHHHHHHHhCCCcEEEE
Confidence 578999999999999643 1246778888899999999976
No 123
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=97.12 E-value=0.0018 Score=54.93 Aligned_cols=101 Identities=15% Similarity=0.058 Sum_probs=59.2
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+... + |..+|+..|.-.. .-... ...... .+. .++ ..+
T Consensus 43 ~vLDiG~G~G~~~~~la~~------------~---~~~~v~~vD~s~~-~~~~a------~~~~~~-~~~--~~v--~~~ 95 (204)
T 3e05_A 43 VMWDIGAGSASVSIEASNL------------M---PNGRIFALERNPQ-YLGFI------RDNLKK-FVA--RNV--TLV 95 (204)
T ss_dssp EEEEETCTTCHHHHHHHHH------------C---TTSEEEEEECCHH-HHHHH------HHHHHH-HTC--TTE--EEE
T ss_pred EEEEECCCCCHHHHHHHHH------------C---CCCEEEEEeCCHH-HHHHH------HHHHHH-hCC--CcE--EEE
Confidence 7999999999987755432 1 2356666664211 00000 011111 111 122 223
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-+.+...+.+..++|++++..+++ . ...+|+.-.+-|+|||++++...
T Consensus 96 ~~d~~~~~~~~~~~D~i~~~~~~~---~----------------------~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 96 EAFAPEGLDDLPDPDRVFIGGSGG---M----------------------LEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp ECCTTTTCTTSCCCSEEEESCCTT---C----------------------HHHHHHHHHHHCCTTCEEEEEEC
T ss_pred eCChhhhhhcCCCCCEEEECCCCc---C----------------------HHHHHHHHHHhcCCCeEEEEEec
Confidence 344444444457899999988775 2 45677778888999999998764
No 124
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=97.12 E-value=0.00094 Score=60.64 Aligned_cols=42 Identities=10% Similarity=0.096 Sum_probs=33.3
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
++++|+|+|+.++||+.. .|....|+.-++-| |||++++.+.
T Consensus 108 ~~~fD~Vv~~~~l~~~~~--------------------~~~~~~l~~l~~lL-PGG~l~lS~~ 149 (261)
T 3iv6_A 108 AGHFDFVLNDRLINRFTT--------------------EEARRACLGMLSLV-GSGTVRASVK 149 (261)
T ss_dssp TTCCSEEEEESCGGGSCH--------------------HHHHHHHHHHHHHH-TTSEEEEEEE
T ss_pred CCCccEEEEhhhhHhCCH--------------------HHHHHHHHHHHHhC-cCcEEEEEec
Confidence 578999999999998532 34566677677778 9999999884
No 125
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=97.12 E-value=0.0036 Score=54.42 Aligned_cols=22 Identities=18% Similarity=0.140 Sum_probs=17.7
Q ss_pred HHHHHHHHHhhccCceeEEEEe
Q 045960 134 STFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 134 ~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
..+|+.-.+-|+|||++++.+.
T Consensus 158 ~~~l~~~~~~LkpgG~l~i~~~ 179 (230)
T 1fbn_A 158 EILIKNAKWFLKKGGYGMIAIK 179 (230)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHhCCCCcEEEEEEe
Confidence 4567777889999999999853
No 126
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=97.10 E-value=0.0014 Score=61.26 Aligned_cols=102 Identities=17% Similarity=0.180 Sum_probs=59.9
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+.. .+ ..+|+.-|.. ..-...+ ..... .+.. .++- .+
T Consensus 67 ~VLDiGcGtG~ls~~la~------------~g----~~~v~gvD~s--~~~~~a~------~~~~~-~~~~-~~i~--~~ 118 (340)
T 2fyt_A 67 VVLDVGCGTGILSMFAAK------------AG----AKKVLGVDQS--EILYQAM------DIIRL-NKLE-DTIT--LI 118 (340)
T ss_dssp EEEEETCTTSHHHHHHHH------------TT----CSEEEEEESS--THHHHHH------HHHHH-TTCT-TTEE--EE
T ss_pred EEEEeeccCcHHHHHHHH------------cC----CCEEEEEChH--HHHHHHH------HHHHH-cCCC-CcEE--EE
Confidence 799999999987664431 11 2478888864 2222221 11111 1110 1221 12
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeE
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMV 151 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~v 151 (300)
-+...+--+|++++|+++|....+-+.. ..++..+|..+.+-|+|||+++
T Consensus 119 ~~d~~~~~~~~~~~D~Ivs~~~~~~l~~-------------------~~~~~~~l~~~~~~LkpgG~li 168 (340)
T 2fyt_A 119 KGKIEEVHLPVEKVDVIISEWMGYFLLF-------------------ESMLDSVLYAKNKYLAKGGSVY 168 (340)
T ss_dssp ESCTTTSCCSCSCEEEEEECCCBTTBTT-------------------TCHHHHHHHHHHHHEEEEEEEE
T ss_pred EeeHHHhcCCCCcEEEEEEcCchhhccC-------------------HHHHHHHHHHHHhhcCCCcEEE
Confidence 3444443478889999999763222222 1246778999999999999998
No 127
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=97.08 E-value=0.00015 Score=67.64 Aligned_cols=106 Identities=15% Similarity=0.181 Sum_probs=65.4
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+... + |..+|+..|... -. +......... .+. ..-+ +
T Consensus 199 ~VLDlGcG~G~~~~~la~~------------~---~~~~v~~vD~s~-----~~--l~~a~~~~~~-~~~--~~~~---~ 250 (343)
T 2pjd_A 199 KVLDVGCGAGVLSVAFARH------------S---PKIRLTLCDVSA-----PA--VEASRATLAA-NGV--EGEV---F 250 (343)
T ss_dssp BCCBTTCTTSHHHHHHHHH------------C---TTCBCEEEESBH-----HH--HHHHHHHHHH-TTC--CCEE---E
T ss_pred eEEEecCccCHHHHHHHHH------------C---CCCEEEEEECCH-----HH--HHHHHHHHHH-hCC--CCEE---E
Confidence 6899999999988755421 1 345677777421 10 1111111111 111 1112 3
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
.+.++. ++++++|+++|+..+||... ....+...+|+.-.+-|+|||++++...
T Consensus 251 ~~d~~~--~~~~~fD~Iv~~~~~~~g~~-----------------~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 304 (343)
T 2pjd_A 251 ASNVFS--EVKGRFDMIISNPPFHDGMQ-----------------TSLDAAQTLIRGAVRHLNSGGELRIVAN 304 (343)
T ss_dssp ECSTTT--TCCSCEEEEEECCCCCSSSH-----------------HHHHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred Eccccc--cccCCeeEEEECCCcccCcc-----------------CCHHHHHHHHHHHHHhCCCCcEEEEEEc
Confidence 445544 34789999999999998332 1134578899999999999999998753
No 128
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=97.06 E-value=0.005 Score=54.59 Aligned_cols=123 Identities=11% Similarity=0.074 Sum_probs=60.8
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+... .+. +|+.-|+-..=.... ...... .+-. .++ ..+
T Consensus 52 ~vLDlG~G~G~~~~~la~~---------------~~~-~v~gvDi~~~~~~~a-------~~n~~~-~~~~-~~v--~~~ 104 (259)
T 3lpm_A 52 KIIDLCSGNGIIPLLLSTR---------------TKA-KIVGVEIQERLADMA-------KRSVAY-NQLE-DQI--EII 104 (259)
T ss_dssp EEEETTCTTTHHHHHHHTT---------------CCC-EEEEECCSHHHHHHH-------HHHHHH-TTCT-TTE--EEE
T ss_pred EEEEcCCchhHHHHHHHHh---------------cCC-cEEEEECCHHHHHHH-------HHHHHH-CCCc-ccE--EEE
Confidence 7999999999877754321 122 677777522111111 011111 1110 112 223
Q ss_pred CCccccc--cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 83 PGSFYTR--LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 83 pgSFy~~--l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
-+.+..- -+|++++|+|+|+-.++..+. ....++......-......++..+|+.-++-|+|||++++..
T Consensus 105 ~~D~~~~~~~~~~~~fD~Ii~npPy~~~~~--~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 176 (259)
T 3lpm_A 105 EYDLKKITDLIPKERADIVTCNPPYFATPD--TSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVH 176 (259)
T ss_dssp CSCGGGGGGTSCTTCEEEEEECCCC-------------------------HHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ECcHHHhhhhhccCCccEEEECCCCCCCcc--ccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEE
Confidence 3444332 267899999999866654311 000111111111111224578899999999999999999965
No 129
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=97.05 E-value=0.0069 Score=53.48 Aligned_cols=71 Identities=14% Similarity=0.012 Sum_probs=43.6
Q ss_pred cccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHH--HHHHHHHHHHHhhccCceeEEEEeecCCCCCCCc
Q 045960 88 TRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFES--DFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPG 165 (300)
Q Consensus 88 ~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~--D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~ 165 (300)
...||++++|.++.++.-.|..+- +..+ ....+|+.-++-|+|||++++.....
T Consensus 116 ~~~~~~~~~D~v~~~~~dp~~k~~----------------h~krr~~~~~~l~~~~~~LkpGG~l~~~td~~-------- 171 (235)
T 3ckk_A 116 PNFFYKGQLTKMFFLFPDPHFKRT----------------KHKWRIISPTLLAEYAYVLRVGGLVYTITDVL-------- 171 (235)
T ss_dssp HHHCCTTCEEEEEEESCC---------------------------CCCHHHHHHHHHHEEEEEEEEEEESCH--------
T ss_pred hhhCCCcCeeEEEEeCCCchhhhh----------------hhhhhhhhHHHHHHHHHHCCCCCEEEEEeCCH--------
Confidence 345789999999998887774320 0000 01468888899999999998876221
Q ss_pred hHHHHHHHHHHHcCCCc
Q 045960 166 EPMLMVLKDMISEGLAE 182 (300)
Q Consensus 166 ~~l~~al~~mv~eG~i~ 182 (300)
+....++..|...|.+.
T Consensus 172 ~~~~~~~~~l~~~~~f~ 188 (235)
T 3ckk_A 172 ELHDWMCTHFEEHPLFE 188 (235)
T ss_dssp HHHHHHHHHHHTSTTEE
T ss_pred HHHHHHHHHHHHCCCcc
Confidence 34555666666666443
No 130
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=97.03 E-value=0.0037 Score=52.30 Aligned_cols=114 Identities=19% Similarity=0.228 Sum_probs=63.1
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+.... ... ..+...|..+|+..|+-..- .++ +--+. .
T Consensus 25 ~vLDlGcG~G~~~~~la~~~----~~~--~~~~~~~~~~v~~vD~s~~~------~~~--------------~~~~~--~ 76 (196)
T 2nyu_A 25 RVLDCGAAPGAWSQVAVQKV----NAA--GTDPSSPVGFVLGVDLLHIF------PLE--------------GATFL--C 76 (196)
T ss_dssp EEEEETCCSCHHHHHHHHHT----TTT--CCCTTSCCCEEEEECSSCCC------CCT--------------TCEEE--C
T ss_pred EEEEeCCCCCHHHHHHHHHh----ccc--cccccCCCceEEEEechhcc------cCC--------------CCeEE--E
Confidence 79999999999887654321 000 00011233678888865420 010 00111 0
Q ss_pred CCcccc--------ccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 83 PGSFYT--------RLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 83 pgSFy~--------~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
.+.+.. ..+|++++|+|+|..++||.-.- . ... .........+|+.-.+-|+|||++++..
T Consensus 77 ~~d~~~~~~~~~~~~~~~~~~fD~V~~~~~~~~~~~~--------~-~~~--~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 77 PADVTDPRTSQRILEVLPGRRADVILSDMAPNATGFR--------D-LDH--DRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp SCCTTSHHHHHHHHHHSGGGCEEEEEECCCCCCCSCH--------H-HHH--HHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eccCCCHHHHHHHHHhcCCCCCcEEEeCCCCCCCCCc--------c-cCH--HHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 222222 23567799999998777763220 0 000 0112234577888888999999999986
Q ss_pred e
Q 045960 155 L 155 (300)
Q Consensus 155 ~ 155 (300)
.
T Consensus 146 ~ 146 (196)
T 2nyu_A 146 W 146 (196)
T ss_dssp C
T ss_pred c
Confidence 5
No 131
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=97.01 E-value=0.0023 Score=52.74 Aligned_cols=37 Identities=19% Similarity=0.275 Sum_probs=29.7
Q ss_pred CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 94 NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
+++|+++++..+|+ +..+|+.-.+-|+|||++++...
T Consensus 99 ~~~D~v~~~~~~~~-------------------------~~~~l~~~~~~l~~gG~l~~~~~ 135 (192)
T 1l3i_A 99 PDIDIAVVGGSGGE-------------------------LQEILRIIKDKLKPGGRIIVTAI 135 (192)
T ss_dssp CCEEEEEESCCTTC-------------------------HHHHHHHHHHTEEEEEEEEEEEC
T ss_pred CCCCEEEECCchHH-------------------------HHHHHHHHHHhcCCCcEEEEEec
Confidence 58999999877654 35677777889999999998764
No 132
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=96.99 E-value=0.0034 Score=52.71 Aligned_cols=115 Identities=10% Similarity=0.016 Sum_probs=60.4
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+.... + |.-+|+.-|.-..=-... ...... .+.. .++ ..+
T Consensus 25 ~vLDlGcG~G~~~~~l~~~~-----------~---~~~~v~~vD~s~~~~~~a-------~~~~~~-~~~~-~~v--~~~ 79 (197)
T 3eey_A 25 TVVDATCGNGNDTAFLASLV-----------G---ENGRVFGFDIQDKAIANT-------TKKLTD-LNLI-DRV--TLI 79 (197)
T ss_dssp EEEESCCTTSHHHHHHHHHH-----------C---TTCEEEEECSCHHHHHHH-------HHHHHH-TTCG-GGE--EEE
T ss_pred EEEEcCCCCCHHHHHHHHHh-----------C---CCCEEEEEECCHHHHHHH-------HHHHHH-cCCC-CCe--EEE
Confidence 79999999998877654321 1 224677777432111110 111111 0100 111 223
Q ss_pred CCcccccc-CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRL-FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l-~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-+++..-. ++++++|+++++..+..-.. ..+... .+|...+|+.-.+-|+|||++++...
T Consensus 80 ~~d~~~~~~~~~~~fD~v~~~~~~~~~~~--~~~~~~-----------~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 80 KDGHQNMDKYIDCPVKAVMFNLGYLPSGD--HSISTR-----------PETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp CSCGGGGGGTCCSCEEEEEEEESBCTTSC--TTCBCC-----------HHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ECCHHHHhhhccCCceEEEEcCCcccCcc--cccccC-----------cccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 34433222 56689999999876611000 000001 12445578888889999999998764
No 133
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=96.99 E-value=0.0016 Score=56.18 Aligned_cols=45 Identities=22% Similarity=0.011 Sum_probs=32.3
Q ss_pred CccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 84 GSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
+.....+.+.+++|++++..++|++.+ .-.+-|+|||++++....
T Consensus 123 ~d~~~~~~~~~~fD~v~~~~~~~~~~~----------------------------~~~~~L~pgG~l~~~~~~ 167 (231)
T 1vbf_A 123 GDGTLGYEEEKPYDRVVVWATAPTLLC----------------------------KPYEQLKEGGIMILPIGV 167 (231)
T ss_dssp SCGGGCCGGGCCEEEEEESSBBSSCCH----------------------------HHHHTEEEEEEEEEEECS
T ss_pred CCcccccccCCCccEEEECCcHHHHHH----------------------------HHHHHcCCCcEEEEEEcC
Confidence 444443445678999999999998432 134579999999998753
No 134
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=96.98 E-value=0.0031 Score=53.37 Aligned_cols=98 Identities=15% Similarity=0.119 Sum_probs=57.4
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+... .|..+|+..|.-.. .-...+ ..... .+ ..+ +..+
T Consensus 68 ~vLDiG~G~G~~~~~l~~~---------------~~~~~v~~vD~s~~-~~~~a~------~~~~~-~~--~~~--v~~~ 120 (207)
T 1jsx_A 68 RFIDVGTGPGLPGIPLSIV---------------RPEAHFTLLDSLGK-RVRFLR------QVQHE-LK--LEN--IEPV 120 (207)
T ss_dssp EEEEETCTTTTTHHHHHHH---------------CTTSEEEEEESCHH-HHHHHH------HHHHH-TT--CSS--EEEE
T ss_pred eEEEECCCCCHHHHHHHHH---------------CCCCEEEEEeCCHH-HHHHHH------HHHHH-cC--CCC--eEEE
Confidence 7999999999998865532 12356777774211 111110 11111 11 122 2223
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
.+.+.. +.|.+++|++++... + ++..+|+.-.+-|+|||++++..
T Consensus 121 ~~d~~~-~~~~~~~D~i~~~~~-------~-------------------~~~~~l~~~~~~L~~gG~l~~~~ 165 (207)
T 1jsx_A 121 QSRVEE-FPSEPPFDGVISRAF-------A-------------------SLNDMVSWCHHLPGEQGRFYALK 165 (207)
T ss_dssp ECCTTT-SCCCSCEEEEECSCS-------S-------------------SHHHHHHHHTTSEEEEEEEEEEE
T ss_pred ecchhh-CCccCCcCEEEEecc-------C-------------------CHHHHHHHHHHhcCCCcEEEEEe
Confidence 444443 336789999998531 1 24577787888999999999874
No 135
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=96.98 E-value=0.0015 Score=62.07 Aligned_cols=111 Identities=15% Similarity=0.058 Sum_probs=62.1
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+.. . .|..+|+..|.-. ..+ ......... .+-. ..+-+..
T Consensus 224 ~~VLDlGcG~G~~s~~la~--------~-------~p~~~V~gvD~s~---~al----~~Ar~n~~~-ngl~-~~~~v~~ 279 (375)
T 4dcm_A 224 GEIVDLGCGNGVIGLTLLD--------K-------NPQAKVVFVDESP---MAV----ASSRLNVET-NMPE-ALDRCEF 279 (375)
T ss_dssp SEEEEETCTTCHHHHHHHH--------H-------CTTCEEEEEESCH---HHH----HHHHHHHHH-HCGG-GGGGEEE
T ss_pred CeEEEEeCcchHHHHHHHH--------H-------CCCCEEEEEECcH---HHH----HHHHHHHHH-cCCC-cCceEEE
Confidence 3799999999988876542 1 1346778777421 111 111111111 1100 0111222
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+-+.++. -+|++++|+|+|+-.+|+...++.. ....+|+.-.+-|+|||++++..
T Consensus 280 ~~~D~~~-~~~~~~fD~Ii~nppfh~~~~~~~~-----------------~~~~~l~~~~~~LkpgG~l~iv~ 334 (375)
T 4dcm_A 280 MINNALS-GVEPFRFNAVLCNPPFHQQHALTDN-----------------VAWEMFHHARRCLKINGELYIVA 334 (375)
T ss_dssp EECSTTT-TCCTTCEEEEEECCCC-------CC-----------------HHHHHHHHHHHHEEEEEEEEEEE
T ss_pred Eechhhc-cCCCCCeeEEEECCCcccCcccCHH-----------------HHHHHHHHHHHhCCCCcEEEEEE
Confidence 3455555 4688899999999999986554431 12357777888899999999965
No 136
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=96.97 E-value=0.003 Score=58.50 Aligned_cols=102 Identities=18% Similarity=0.206 Sum_probs=60.8
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+.. .+ .-+|+.-|.. ..-...+. .... .+.. .++- .+
T Consensus 41 ~VLDiGcGtG~ls~~la~------------~g----~~~v~~vD~s--~~~~~a~~------~~~~-~~~~-~~i~--~~ 92 (328)
T 1g6q_1 41 IVLDVGCGTGILSMFAAK------------HG----AKHVIGVDMS--SIIEMAKE------LVEL-NGFS-DKIT--LL 92 (328)
T ss_dssp EEEEETCTTSHHHHHHHH------------TC----CSEEEEEESS--THHHHHHH------HHHH-TTCT-TTEE--EE
T ss_pred EEEEecCccHHHHHHHHH------------CC----CCEEEEEChH--HHHHHHHH------HHHH-cCCC-CCEE--EE
Confidence 799999999987764331 11 2478888874 23222221 1111 1110 1121 12
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeE
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMV 151 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~v 151 (300)
-+..-.--+|.+++|+++|....+.+.... ++..+|..+.+-|+|||+++
T Consensus 93 ~~d~~~~~~~~~~~D~Ivs~~~~~~l~~~~-------------------~~~~~l~~~~~~LkpgG~li 142 (328)
T 1g6q_1 93 RGKLEDVHLPFPKVDIIISEWMGYFLLYES-------------------MMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp ESCTTTSCCSSSCEEEEEECCCBTTBSTTC-------------------CHHHHHHHHHHHEEEEEEEE
T ss_pred ECchhhccCCCCcccEEEEeCchhhcccHH-------------------HHHHHHHHHHhhcCCCeEEE
Confidence 344433346778999999986555443322 35678888999999999997
No 137
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=96.96 E-value=0.0071 Score=52.02 Aligned_cols=60 Identities=17% Similarity=0.041 Sum_probs=34.4
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHH--HhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFL--NQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~--~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
+|++++|+|+++-.+||...-.. ..+ ..++. .....+...+|+.-.+-|+|||++++.+.
T Consensus 119 ~~~~~fD~I~~npp~~~~~~~~~--~~~---~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 180 (230)
T 3evz_A 119 VVEGTFDVIFSAPPYYDKPLGRV--LTE---REAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLP 180 (230)
T ss_dssp TCCSCEEEEEECCCCC--------------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred cccCceeEEEECCCCcCCccccc--cCh---hhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEec
Confidence 45689999999988888544110 000 00000 00112346788888889999999999864
No 138
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=96.95 E-value=0.0013 Score=56.25 Aligned_cols=101 Identities=14% Similarity=0.074 Sum_probs=57.3
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..+..+.... + |..+|+..|.-.+ .-... .+.... .+. .++ ..
T Consensus 79 ~~vLdiG~G~G~~~~~l~~~~-----------~---~~~~v~~vD~~~~-~~~~a------~~~~~~-~~~--~~v--~~ 132 (215)
T 2yxe_A 79 MKVLEIGTGCGYHAAVTAEIV-----------G---EDGLVVSIERIPE-LAEKA------ERTLRK-LGY--DNV--IV 132 (215)
T ss_dssp CEEEEECCTTSHHHHHHHHHH-----------C---TTSEEEEEESCHH-HHHHH------HHHHHH-HTC--TTE--EE
T ss_pred CEEEEECCCccHHHHHHHHHh-----------C---CCCEEEEEeCCHH-HHHHH------HHHHHH-cCC--CCe--EE
Confidence 379999999999887554321 1 2246666663211 11111 111111 111 222 12
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
+.+.....+.+.+++|+++++.++|++.+ .-.+-|+|||++++.+..
T Consensus 133 ~~~d~~~~~~~~~~fD~v~~~~~~~~~~~----------------------------~~~~~L~pgG~lv~~~~~ 179 (215)
T 2yxe_A 133 IVGDGTLGYEPLAPYDRIYTTAAGPKIPE----------------------------PLIRQLKDGGKLLMPVGR 179 (215)
T ss_dssp EESCGGGCCGGGCCEEEEEESSBBSSCCH----------------------------HHHHTEEEEEEEEEEESS
T ss_pred EECCcccCCCCCCCeeEEEECCchHHHHH----------------------------HHHHHcCCCcEEEEEECC
Confidence 33444333333678999999999998432 134679999999998853
No 139
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=96.86 E-value=0.0035 Score=55.85 Aligned_cols=18 Identities=22% Similarity=0.189 Sum_probs=14.7
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|.|+||++|..|..+..
T Consensus 79 ~VLDlG~GtG~~t~~la~ 96 (232)
T 3id6_C 79 KVLYLGAASGTTISHVSD 96 (232)
T ss_dssp EEEEETCTTSHHHHHHHH
T ss_pred EEEEEeecCCHHHHHHHH
Confidence 799999999997775543
No 140
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=96.84 E-value=0.0058 Score=59.38 Aligned_cols=38 Identities=11% Similarity=-0.004 Sum_probs=28.7
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEE
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLT 153 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~ 153 (300)
.+++|+|+++.++++ | |+...|+...+.|+|||+|++.
T Consensus 321 ~~~FDvIvvn~~l~~----~-------------------d~~~~L~el~r~LKpGG~lVi~ 358 (433)
T 1u2z_A 321 IPQCDVILVNNFLFD----E-------------------DLNKKVEKILQTAKVGCKIISL 358 (433)
T ss_dssp GGGCSEEEECCTTCC----H-------------------HHHHHHHHHHTTCCTTCEEEES
T ss_pred cCCCCEEEEeCcccc----c-------------------cHHHHHHHHHHhCCCCeEEEEe
Confidence 467899999877743 1 3455677788899999999875
No 141
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=96.81 E-value=0.0035 Score=55.84 Aligned_cols=47 Identities=21% Similarity=0.289 Sum_probs=33.8
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-++.... +|++++|+++++...|+ +..++..-.+-|+|||++++...
T Consensus 173 ~~d~~~~-~~~~~fD~Vv~n~~~~~-------------------------~~~~l~~~~~~LkpgG~lils~~ 219 (254)
T 2nxc_A 173 EGSLEAA-LPFGPFDLLVANLYAEL-------------------------HAALAPRYREALVPGGRALLTGI 219 (254)
T ss_dssp ESCHHHH-GGGCCEEEEEEECCHHH-------------------------HHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ECChhhc-CcCCCCCEEEECCcHHH-------------------------HHHHHHHHHHHcCCCCEEEEEee
Confidence 3444443 57889999999876655 34566667788999999998643
No 142
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=96.80 E-value=0.0042 Score=53.82 Aligned_cols=40 Identities=18% Similarity=0.194 Sum_probs=28.4
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
.+++|+++++.+-|+ +...+|+.-++-|||||++++.+..
T Consensus 124 ~~~fD~V~~~~~~~~------------------------~~~~~l~~~~r~LkpgG~l~i~~~~ 163 (210)
T 1nt2_A 124 VEKVDLIYQDIAQKN------------------------QIEILKANAEFFLKEKGEVVIMVKA 163 (210)
T ss_dssp CCCEEEEEECCCSTT------------------------HHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred ccceeEEEEeccChh------------------------HHHHHHHHHHHHhCCCCEEEEEEec
Confidence 378999999832111 1234567778889999999999743
No 143
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=96.75 E-value=0.0065 Score=53.14 Aligned_cols=98 Identities=16% Similarity=0.058 Sum_probs=56.8
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+... .|..+|+.-|.-. +--...+ ... ...+. .+ +..+
T Consensus 73 ~vLDiG~G~G~~~~~la~~---------------~~~~~v~~vD~s~-~~~~~a~------~~~-~~~~~--~~--v~~~ 125 (240)
T 1xdz_A 73 TICDVGAGAGFPSLPIKIC---------------FPHLHVTIVDSLN-KRITFLE------KLS-EALQL--EN--TTFC 125 (240)
T ss_dssp EEEEECSSSCTTHHHHHHH---------------CTTCEEEEEESCH-HHHHHHH------HHH-HHHTC--SS--EEEE
T ss_pred EEEEecCCCCHHHHHHHHh---------------CCCCEEEEEeCCH-HHHHHHH------HHH-HHcCC--CC--EEEE
Confidence 7999999999998865431 1235677777421 0000110 011 11111 23 2233
Q ss_pred CCccccccCC---CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEE
Q 045960 83 PGSFYTRLFP---HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLT 153 (300)
Q Consensus 83 pgSFy~~l~P---~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~ 153 (300)
-++...-.++ ++++|+|+|... + |+..+|+.-.+-|+|||++++.
T Consensus 126 ~~d~~~~~~~~~~~~~fD~V~~~~~-------~-------------------~~~~~l~~~~~~LkpgG~l~~~ 173 (240)
T 1xdz_A 126 HDRAETFGQRKDVRESYDIVTARAV-------A-------------------RLSVLSELCLPLVKKNGLFVAL 173 (240)
T ss_dssp ESCHHHHTTCTTTTTCEEEEEEECC-------S-------------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred eccHHHhcccccccCCccEEEEecc-------C-------------------CHHHHHHHHHHhcCCCCEEEEE
Confidence 4444432332 578999998651 1 2567788888999999999876
No 144
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=96.68 E-value=0.014 Score=50.09 Aligned_cols=20 Identities=20% Similarity=0.094 Sum_probs=16.4
Q ss_pred HHHHHHHhhccCceeEEEEe
Q 045960 136 FLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 136 fL~~Ra~EL~~GG~~vl~~~ 155 (300)
+|+.-.+-|+|||++++...
T Consensus 136 ~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 136 LYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp HHHHHHHHSCTTCEEEEEEC
T ss_pred HHHHHHHhcCCCcEEEEEec
Confidence 66667788999999998774
No 145
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=96.67 E-value=0.0054 Score=53.72 Aligned_cols=100 Identities=17% Similarity=0.200 Sum_probs=58.0
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+...+ + |..+|+..|+-.. .-...+ ..... .+. .+ -+..+
T Consensus 96 ~vldiG~G~G~~~~~l~~~~-----------~---~~~~v~~~D~~~~-~~~~a~------~~~~~-~~~--~~-~v~~~ 150 (255)
T 3mb5_A 96 FIVEAGVGSGALTLFLANIV-----------G---PEGRVVSYEIRED-FAKLAW------ENIKW-AGF--DD-RVTIK 150 (255)
T ss_dssp EEEEECCTTSHHHHHHHHHH-----------C---TTSEEEEECSCHH-HHHHHH------HHHHH-HTC--TT-TEEEE
T ss_pred EEEEecCCchHHHHHHHHHh-----------C---CCeEEEEEecCHH-HHHHHH------HHHHH-cCC--CC-ceEEE
Confidence 79999999998887665432 1 2356777775211 111111 11111 111 11 12234
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-+.+. ..+|++++|++++. .|. ...+|+.-.+-|+|||++++...
T Consensus 151 ~~d~~-~~~~~~~~D~v~~~--------~~~-------------------~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 151 LKDIY-EGIEEENVDHVILD--------LPQ-------------------PERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CSCGG-GCCCCCSEEEEEEC--------SSC-------------------GGGGHHHHHHHEEEEEEEEEEES
T ss_pred ECchh-hccCCCCcCEEEEC--------CCC-------------------HHHHHHHHHHHcCCCCEEEEEEC
Confidence 45665 44889999999983 232 12445566788999999988764
No 146
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=96.65 E-value=0.0026 Score=55.42 Aligned_cols=47 Identities=17% Similarity=0.173 Sum_probs=32.2
Q ss_pred cCCccccccCCCCc-ccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 82 SPGSFYTRLFPHNF-LDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 82 vpgSFy~~l~P~~s-v~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
+.+.+. .-+|..+ +|+++++.++|++.+ .-.+-|+|||++++.+...
T Consensus 145 ~~~d~~-~~~~~~~~fD~Ii~~~~~~~~~~----------------------------~~~~~L~pgG~lvi~~~~~ 192 (235)
T 1jg1_A 145 ILGDGS-KGFPPKAPYDVIIVTAGAPKIPE----------------------------PLIEQLKIGGKLIIPVGSY 192 (235)
T ss_dssp EESCGG-GCCGGGCCEEEEEECSBBSSCCH----------------------------HHHHTEEEEEEEEEEECSS
T ss_pred EECCcc-cCCCCCCCccEEEECCcHHHHHH----------------------------HHHHhcCCCcEEEEEEecC
Confidence 334442 3345544 999999999998432 1245799999999998643
No 147
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=96.63 E-value=0.0028 Score=54.96 Aligned_cols=77 Identities=5% Similarity=-0.090 Sum_probs=43.2
Q ss_pred CC-CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHH
Q 045960 91 FP-HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPML 169 (300)
Q Consensus 91 ~P-~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~ 169 (300)
+| ++++|+|+|+. . ...+|+.-.+-|+|||+++ ...+..+. +.+.
T Consensus 106 ~~~~~~fD~v~~~~------~----------------------~~~~l~~~~~~LkpgG~l~-~~~~~~~~-----~~~~ 151 (226)
T 3m33_A 106 AGLGAPFGLIVSRR------G----------------------PTSVILRLPELAAPDAHFL-YVGPRLNV-----PEVP 151 (226)
T ss_dssp TTCCCCEEEEEEES------C----------------------CSGGGGGHHHHEEEEEEEE-EEESSSCC-----THHH
T ss_pred CcCCCCEEEEEeCC------C----------------------HHHHHHHHHHHcCCCcEEE-EeCCcCCH-----HHHH
Confidence 55 78999999971 1 1234555678899999998 22222211 2222
Q ss_pred HHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHH
Q 045960 170 MVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIV 206 (300)
Q Consensus 170 ~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i 206 (300)
+. +...|. ....++.. ..+.++++.++.+...
T Consensus 152 ~~---l~~~Gf-~~~~~~~~-~~~~~~~~~~~~~~~~ 183 (226)
T 3m33_A 152 ER---LAAVGW-DIVAEDHV-SVLAHAPTWEDWQMRG 183 (226)
T ss_dssp HH---HHHTTC-EEEEEEEE-EEEEEECSHHHHHHHH
T ss_pred HH---HHHCCC-eEEEEEee-eecccCcCHHHHhhhH
Confidence 22 234453 22334444 5666777777665443
No 148
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=96.61 E-value=0.004 Score=53.71 Aligned_cols=38 Identities=13% Similarity=0.022 Sum_probs=28.0
Q ss_pred CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 94 NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+++|++|+....|+. .+...++... +-|+|||++++.-
T Consensus 133 ~~fD~V~~d~~~~~~----------------------~~~~~~~~~~-~~LkpgG~lv~~~ 170 (221)
T 3u81_A 133 DTLDMVFLDHWKDRY----------------------LPDTLLLEKC-GLLRKGTVLLADN 170 (221)
T ss_dssp CCCSEEEECSCGGGH----------------------HHHHHHHHHT-TCCCTTCEEEESC
T ss_pred CceEEEEEcCCcccc----------------------hHHHHHHHhc-cccCCCeEEEEeC
Confidence 789999998877762 1234556655 8899999998743
No 149
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=96.59 E-value=0.0024 Score=58.92 Aligned_cols=103 Identities=12% Similarity=0.003 Sum_probs=37.3
Q ss_pred cCCccccc--cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCC
Q 045960 82 SPGSFYTR--LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDN 159 (300)
Q Consensus 82 vpgSFy~~--l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~ 159 (300)
+.+..... -+|++++|+|++...-+| .+|..-.+-|+|||++++.....
T Consensus 172 ~~~d~~~~~~~~~~~~fD~V~~~~~~~~---------------------------~~l~~~~~~LkpgG~lv~~~~~~-- 222 (336)
T 2b25_A 172 IHKDISGATEDIKSLTFDAVALDMLNPH---------------------------VTLPVFYPHLKHGGVCAVYVVNI-- 222 (336)
T ss_dssp EESCTTCCC-------EEEEEECSSSTT---------------------------TTHHHHGGGEEEEEEEEEEESSH--
T ss_pred EECChHHcccccCCCCeeEEEECCCCHH---------------------------HHHHHHHHhcCCCcEEEEEeCCH--
Confidence 34454443 257788999998644333 14556678899999999776422
Q ss_pred CCCCCchHHHHHHHHHHHcCC-Cc-----hhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEEEEe
Q 045960 160 FHATPGEPMLMVLKDMISEGL-AE-----ESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVETFN 221 (300)
Q Consensus 160 ~~~~~~~~l~~al~~mv~eG~-i~-----~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e~~~ 221 (300)
+.+...+..|...+. +. +.....+ ..-...+...++.+.++++| |++.+++...
T Consensus 223 ------~~~~~~~~~l~~~~~~~~~~~~~~~~~~~w-~~~~~~~~~g~y~~~l~~aG-F~~v~~~~~~ 282 (336)
T 2b25_A 223 ------TQVIELLDGIRTCELALSCEKISEVIVRDW-LVCLAKQKNGILAQKVESKI-NTDVQLDSQE 282 (336)
T ss_dssp ------HHHHHHHHHHHHHTCCEEEEEEECCCCCCE-EECC---------------------------
T ss_pred ------HHHHHHHHHHHhcCCCcccceEEEecccce-EEEeecccccchhhhhcccc-cccccccccc
Confidence 334455555544221 11 1111222 11111222338999999998 8887765543
No 150
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=96.58 E-value=0.0094 Score=53.17 Aligned_cols=61 Identities=18% Similarity=0.150 Sum_probs=34.6
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHh-HHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQ-FESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q-~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
.+|++++|+|+|+--.++.... . .+...++.+.. ...++..+|+.-++-|+|||++++...
T Consensus 110 ~~~~~~fD~Vv~nPPy~~~~~~----~-~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 171 (260)
T 2ozv_A 110 GLPDEHFHHVIMNPPYNDAGDR----R-TPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISR 171 (260)
T ss_dssp TCCTTCEEEEEECCCC--------------------------CCHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ccCCCCcCEEEECCCCcCCCCC----C-CcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEc
Confidence 3678899999999766664211 1 11111221111 123478899999999999999998764
No 151
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=96.57 E-value=0.006 Score=58.23 Aligned_cols=40 Identities=28% Similarity=0.256 Sum_probs=29.0
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeE
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMV 151 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~v 151 (300)
+..+|+++|-+--+.|-. +..+..+|.+|.+=|+|||+|+
T Consensus 147 pe~~DvivsE~~~~~l~~-------------------e~~l~~~l~a~~r~Lkp~G~~i 186 (376)
T 4hc4_A 147 PEQVDAIVSEWMGYGLLH-------------------ESMLSSVLHARTKWLKEGGLLL 186 (376)
T ss_dssp SSCEEEEECCCCBTTBTT-------------------TCSHHHHHHHHHHHEEEEEEEE
T ss_pred CccccEEEeecccccccc-------------------cchhhhHHHHHHhhCCCCceEC
Confidence 468999999433332222 2237788999999999999987
No 152
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=96.55 E-value=0.0098 Score=48.20 Aligned_cols=43 Identities=12% Similarity=0.081 Sum_probs=28.0
Q ss_pred CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecC
Q 045960 94 NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYND 158 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~ 158 (300)
.++|+++++..+| .. .+.+. ..+.+ .+-|+|||++++......
T Consensus 109 ~~~D~i~~~~~~~--~~-------~~~~~-----------~~~~~--~~~L~~gG~~~~~~~~~~ 151 (171)
T 1ws6_A 109 ERFTVAFMAPPYA--MD-------LAALF-----------GELLA--SGLVEAGGLYVLQHPKDL 151 (171)
T ss_dssp CCEEEEEECCCTT--SC-------TTHHH-----------HHHHH--HTCEEEEEEEEEEEETTS
T ss_pred CceEEEEECCCCc--hh-------HHHHH-----------HHHHh--hcccCCCcEEEEEeCCcc
Confidence 4799999998776 22 11121 11222 577999999999886554
No 153
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=96.55 E-value=0.0058 Score=53.33 Aligned_cols=99 Identities=14% Similarity=0.164 Sum_probs=54.0
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+... .|..+|+.-|.-.. . +......... .+.. .++- .
T Consensus 73 ~~vLDiG~G~G~~~~~la~~---------------~~~~~v~~vD~~~~-~------~~~a~~~~~~-~~~~-~~v~--~ 126 (232)
T 3ntv_A 73 KNILEIGTAIGYSSMQFASI---------------SDDIHVTTIERNET-M------IQYAKQNLAT-YHFE-NQVR--I 126 (232)
T ss_dssp CEEEEECCSSSHHHHHHHTT---------------CTTCEEEEEECCHH-H------HHHHHHHHHH-TTCT-TTEE--E
T ss_pred CEEEEEeCchhHHHHHHHHh---------------CCCCEEEEEECCHH-H------HHHHHHHHHH-cCCC-CcEE--E
Confidence 37999999999988765421 12456676664211 0 0000111111 1110 1221 2
Q ss_pred cCCccccccCC---CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEE
Q 045960 82 SPGSFYTRLFP---HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVL 152 (300)
Q Consensus 82 vpgSFy~~l~P---~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl 152 (300)
+-|.+.. .+| ++++|+|++.. |... +..+|+.-.+-|+|||++++
T Consensus 127 ~~~d~~~-~~~~~~~~~fD~V~~~~---~~~~----------------------~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 127 IEGNALE-QFENVNDKVYDMIFIDA---AKAQ----------------------SKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp EESCGGG-CHHHHTTSCEEEEEEET---TSSS----------------------HHHHHHHHGGGEEEEEEEEE
T ss_pred EECCHHH-HHHhhccCCccEEEEcC---cHHH----------------------HHHHHHHHHHhcCCCeEEEE
Confidence 2334333 233 68999999653 2121 45577777889999999987
No 154
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=96.54 E-value=0.0099 Score=52.20 Aligned_cols=48 Identities=8% Similarity=0.026 Sum_probs=32.9
Q ss_pred CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEE
Q 045960 92 PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVL 152 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl 152 (300)
+.+++|+|+|+..++-....+.. ....+...+|+.-++-|+|||++++
T Consensus 165 ~~~~fD~Iv~npp~~~~~~~~~~-------------~~~~~~~~~l~~~~~~LkpgG~l~~ 212 (250)
T 1o9g_A 165 AGSAPDVVLTDLPYGERTHWEGQ-------------VPGQPVAGLLRSLASALPAHAVIAV 212 (250)
T ss_dssp TTCCCSEEEEECCGGGSSSSSSC-------------CCHHHHHHHHHHHHHHSCTTCEEEE
T ss_pred CCCCceEEEeCCCeecccccccc-------------ccccHHHHHHHHHHHhcCCCcEEEE
Confidence 44589999998766654332210 1124456778877888999999998
No 155
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=96.51 E-value=0.011 Score=52.78 Aligned_cols=118 Identities=14% Similarity=0.101 Sum_probs=66.0
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
.+|.|+||++|..++.+... .|..+|+..|.-.. --.+. ...... .+. .+ +..
T Consensus 111 ~~vLDlG~GsG~~~~~la~~---------------~~~~~v~~vD~s~~-~l~~a------~~n~~~-~~~--~~--v~~ 163 (276)
T 2b3t_A 111 CRILDLGTGTGAIALALASE---------------RPDCEIIAVDRMPD-AVSLA------QRNAQH-LAI--KN--IHI 163 (276)
T ss_dssp CEEEEETCTTSHHHHHHHHH---------------CTTSEEEEECSSHH-HHHHH------HHHHHH-HTC--CS--EEE
T ss_pred CEEEEecCCccHHHHHHHHh---------------CCCCEEEEEECCHH-HHHHH------HHHHHH-cCC--Cc--eEE
Confidence 47999999999988755421 12357777774211 00011 011111 111 12 223
Q ss_pred cCCccccccCCCCcccEEEeccccccccC----------CCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeE
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSR----------MPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMV 151 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~----------vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~v 151 (300)
+-+.+.. .+|++++|+++|+...+|... .|....... ...-.++..+|+.-.+-|+|||+++
T Consensus 164 ~~~d~~~-~~~~~~fD~Iv~npPy~~~~~~~l~~~v~~~~p~~al~~~-------~~g~~~~~~~l~~~~~~LkpgG~l~ 235 (276)
T 2b3t_A 164 LQSDWFS-ALAGQQFAMIVSNPPYIDEQDPHLQQGDVRFEPLTALVAA-------DSGMADIVHIIEQSRNALVSGGFLL 235 (276)
T ss_dssp ECCSTTG-GGTTCCEEEEEECCCCBCTTCHHHHSSGGGSSCSTTTBCH-------HHHTHHHHHHHHHHGGGEEEEEEEE
T ss_pred EEcchhh-hcccCCccEEEECCCCCCccccccChhhhhcCcHHHHcCC-------CcHHHHHHHHHHHHHHhcCCCCEEE
Confidence 4455554 356788999999977776433 121100000 0112456788888889999999999
Q ss_pred EEE
Q 045960 152 LTL 154 (300)
Q Consensus 152 l~~ 154 (300)
+..
T Consensus 236 ~~~ 238 (276)
T 2b3t_A 236 LEH 238 (276)
T ss_dssp EEC
T ss_pred EEE
Confidence 874
No 156
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=96.50 E-value=0.0067 Score=51.81 Aligned_cols=44 Identities=11% Similarity=0.144 Sum_probs=28.7
Q ss_pred CCCc-ccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHH--HHhhccCceeEEEEeecC
Q 045960 92 PHNF-LDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFR--SEELKSQGRMVLTLLYND 158 (300)
Q Consensus 92 P~~s-v~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~R--a~EL~~GG~~vl~~~g~~ 158 (300)
++++ +|+++++..+|+ . +...+|+.- .+=|+|||++++......
T Consensus 121 ~~~~~fD~I~~~~~~~~--~---------------------~~~~~l~~~~~~~~LkpgG~l~i~~~~~~ 167 (201)
T 2ift_A 121 QNQPHFDVVFLDPPFHF--N---------------------LAEQAISLLCENNWLKPNALIYVETEKDK 167 (201)
T ss_dssp CSSCCEEEEEECCCSSS--C---------------------HHHHHHHHHHHTTCEEEEEEEEEEEESSS
T ss_pred ccCCCCCEEEECCCCCC--c---------------------cHHHHHHHHHhcCccCCCcEEEEEECCCC
Confidence 4678 999999877663 1 112233322 445999999998876443
No 157
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=96.50 E-value=0.013 Score=54.33 Aligned_cols=39 Identities=5% Similarity=0.016 Sum_probs=30.4
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+|++++|+|++... +|. ...+|+.-.+-|+|||++++..
T Consensus 184 l~d~~FDvV~~~a~------~~d-------------------~~~~l~el~r~LkPGG~Lvv~~ 222 (298)
T 3fpf_A 184 IDGLEFDVLMVAAL------AEP-------------------KRRVFRNIHRYVDTETRIIYRT 222 (298)
T ss_dssp GGGCCCSEEEECTT------CSC-------------------HHHHHHHHHHHCCTTCEEEEEE
T ss_pred CCCCCcCEEEECCC------ccC-------------------HHHHHHHHHHHcCCCcEEEEEc
Confidence 47899999998654 332 4667777889999999999865
No 158
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=96.48 E-value=0.0022 Score=56.39 Aligned_cols=46 Identities=13% Similarity=0.068 Sum_probs=29.7
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEE
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVL 152 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl 152 (300)
-+|++++|.++.-........ ....|...||+.-++=|||||+|+.
T Consensus 123 ~~~~~~FD~i~~D~~~~~~~~-----------------~~~~~~~~~~~e~~rvLkPGG~l~f 168 (236)
T 3orh_A 123 TLPDGHFDGILYDTYPLSEET-----------------WHTHQFNFIKNHAFRLLKPGGVLTY 168 (236)
T ss_dssp GSCTTCEEEEEECCCCCBGGG-----------------TTTHHHHHHHHTHHHHEEEEEEEEE
T ss_pred cccccCCceEEEeeeecccch-----------------hhhcchhhhhhhhhheeCCCCEEEE
Confidence 478889998864222111000 0123567888888999999999865
No 159
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=96.47 E-value=0.0042 Score=57.03 Aligned_cols=101 Identities=15% Similarity=0.177 Sum_probs=58.0
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+.... + ...+|+..|+-.+ .-... ...... .+ ..+ +..+
T Consensus 78 ~VLDiGcG~G~~~~~la~~~-----------~---~~~~v~gvD~s~~-~~~~a------~~~~~~-~g--~~~--v~~~ 131 (317)
T 1dl5_A 78 RVLEIGGGTGYNAAVMSRVV-----------G---EKGLVVSVEYSRK-ICEIA------KRNVER-LG--IEN--VIFV 131 (317)
T ss_dssp EEEEECCTTSHHHHHHHHHH-----------C---TTCEEEEEESCHH-HHHHH------HHHHHH-TT--CCS--EEEE
T ss_pred EEEEecCCchHHHHHHHHhc-----------C---CCCEEEEEECCHH-HHHHH------HHHHHH-cC--CCC--eEEE
Confidence 79999999998776554321 1 1245666663210 00000 111111 11 123 2223
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
-+.+..-+.+.+++|+|++...+|++.+ .-.+-|+|||++++.+...
T Consensus 132 ~~d~~~~~~~~~~fD~Iv~~~~~~~~~~----------------------------~~~~~LkpgG~lvi~~~~~ 178 (317)
T 1dl5_A 132 CGDGYYGVPEFSPYDVIFVTVGVDEVPE----------------------------TWFTQLKEGGRVIVPINLK 178 (317)
T ss_dssp ESCGGGCCGGGCCEEEEEECSBBSCCCH----------------------------HHHHHEEEEEEEEEEBCBG
T ss_pred ECChhhccccCCCeEEEEEcCCHHHHHH----------------------------HHHHhcCCCcEEEEEECCC
Confidence 4555554556788999999999998431 1245799999999987543
No 160
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=96.45 E-value=0.00076 Score=56.87 Aligned_cols=123 Identities=12% Similarity=-0.010 Sum_probs=58.0
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+... .|..+|+.-|+-..=-...=+.+... + .-+..
T Consensus 32 ~~vLDiG~G~G~~~~~l~~~---------------~~~~~v~~vD~~~~~~~~a~~~~~~~--------~-----~~~~~ 83 (215)
T 4dzr_A 32 TRVIDVGTGSGCIAVSIALA---------------CPGVSVTAVDLSMDALAVARRNAERF--------G-----AVVDW 83 (215)
T ss_dssp EEEEEEESSBCHHHHHHHHH---------------CTTEEEEEEECC--------------------------------C
T ss_pred CEEEEecCCHhHHHHHHHHh---------------CCCCeEEEEECCHHHHHHHHHHHHHh--------C-----CceEE
Confidence 47999999999887765432 12356777775322111111111100 0 01122
Q ss_pred cCCccccccCCC-----CcccEEEeccccccccCC---CCCCCC--CHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeE
Q 045960 82 SPGSFYTRLFPH-----NFLDFVYSSYALHWLSRM---PKGQGN--ESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMV 151 (300)
Q Consensus 82 vpgSFy~~l~P~-----~sv~~~~Ss~alHWLS~v---P~~~~n--~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~v 151 (300)
+-+.+.. .+|+ +++|+++++-.+|+.... +..+.. +.... .-.......+..||+.-.+-|+|||+++
T Consensus 84 ~~~d~~~-~~~~~~~~~~~fD~i~~npp~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~LkpgG~l~ 161 (215)
T 4dzr_A 84 AAADGIE-WLIERAERGRPWHAIVSNPPYIPTGEIDQLEPSVRDYEPRLAL-DGGEDGLQFYRRMAALPPYVLARGRAGV 161 (215)
T ss_dssp CHHHHHH-HHHHHHHTTCCBSEEEECCCCCC-------------------------CTTHHHHHHHTCCGGGBCSSSEEE
T ss_pred EEcchHh-hhhhhhhccCcccEEEECCCCCCCccccccChhhhccCccccc-cCCCcHHHHHHHHHHHHHHHhcCCCeEE
Confidence 3344444 4554 899999998777664432 111110 00000 0001112234788888889999999944
Q ss_pred EEE
Q 045960 152 LTL 154 (300)
Q Consensus 152 l~~ 154 (300)
+..
T Consensus 162 ~~~ 164 (215)
T 4dzr_A 162 FLE 164 (215)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
No 161
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=96.45 E-value=0.0076 Score=52.90 Aligned_cols=98 Identities=11% Similarity=0.011 Sum_probs=43.4
Q ss_pred CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHHH
Q 045960 94 NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVLK 173 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al~ 173 (300)
+++|+++|+-..|+.......+. ++.+.. ..+...++..-++-|+|||.+.+.- ..+..+..
T Consensus 139 ~~fD~i~~npp~~~~~~~~~~~~-~~~~~~------~~~~~~l~~~~~~~LkpgG~l~~~~-----------~~~~~~~~ 200 (254)
T 2h00_A 139 IIYDFCMCNPPFFANQLEAKGVN-SRNPRR------PPPSSVNTGGITEIMAEGGELEFVK-----------RIIHDSLQ 200 (254)
T ss_dssp CCBSEEEECCCCC--------------------------------CTTTTHHHHTHHHHHH-----------HHHHHHHH
T ss_pred CcccEEEECCCCccCcchhcccc-cccccc------cCCHHHHhhhHHHHEecCCEEEEEH-----------HHHHHHHh
Confidence 68999999977776441000000 011110 1123345566677899999875431 12222222
Q ss_pred HHHHcCCCchhhhccccCCCcccCCHHHHHHHHHhcCCeeEEEEE
Q 045960 174 DMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKKEGSFDIQEVE 218 (300)
Q Consensus 174 ~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~~gsF~I~~~e 218 (300)
-+...|.+. + ..-...+.+++.+++++.| |+..+..
T Consensus 201 ~l~~~g~~~------~--~~~~~~~~~~~~~~l~~~G-f~~v~~~ 236 (254)
T 2h00_A 201 LKKRLRWYS------C--MLGKKCSLAPLKEELRIQG-VPKVTYT 236 (254)
T ss_dssp HGGGBSCEE------E--EESSTTSHHHHHHHHHHTT-CSEEEEE
T ss_pred cccceEEEE------E--CCCChhHHHHHHHHHHHcC-CCceEEE
Confidence 121222111 1 0112345689999999998 7654443
No 162
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=96.37 E-value=0.0035 Score=53.98 Aligned_cols=107 Identities=11% Similarity=0.091 Sum_probs=58.9
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCC---CCCcee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGH---EFGSCF 78 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~---~~~~~f 78 (300)
-+|.|+||++|..++.+.... . ....|..+|+.-|.-.. .-...+ ...... +. ...++-
T Consensus 82 ~~VLdiG~G~G~~~~~la~~~----~------~~~~~~~~v~~vD~~~~-~~~~a~------~~~~~~-~~~~~~~~~v~ 143 (227)
T 2pbf_A 82 SRAIDVGSGSGYLTVCMAIKM----N------VLENKNSYVIGLERVKD-LVNFSL------ENIKRD-KPELLKIDNFK 143 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHT----T------TTTCTTCEEEEEESCHH-HHHHHH------HHHHHH-CGGGGSSTTEE
T ss_pred CEEEEECCCCCHHHHHHHHHh----c------ccCCCCCEEEEEeCCHH-HHHHHH------HHHHHc-CccccccCCEE
Confidence 379999999998777554311 0 00123457777774211 111110 111111 10 001221
Q ss_pred eeecCCcccccc----CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 79 VAASPGSFYTRL----FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 79 ~~~vpgSFy~~l----~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
.+-+....-. .+.+++|++++..++|++ +. .-.+-|+|||++++.+
T Consensus 144 --~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~~---~~-------------------------~~~~~LkpgG~lv~~~ 193 (227)
T 2pbf_A 144 --IIHKNIYQVNEEEKKELGLFDAIHVGASASEL---PE-------------------------ILVDLLAENGKLIIPI 193 (227)
T ss_dssp --EEECCGGGCCHHHHHHHCCEEEEEECSBBSSC---CH-------------------------HHHHHEEEEEEEEEEE
T ss_pred --EEECChHhcccccCccCCCcCEEEECCchHHH---HH-------------------------HHHHhcCCCcEEEEEE
Confidence 2234444433 556789999999999973 31 1346799999999998
Q ss_pred ee
Q 045960 155 LY 156 (300)
Q Consensus 155 ~g 156 (300)
..
T Consensus 194 ~~ 195 (227)
T 2pbf_A 194 EE 195 (227)
T ss_dssp EE
T ss_pred cc
Confidence 75
No 163
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=96.34 E-value=0.0077 Score=52.63 Aligned_cols=101 Identities=12% Similarity=0.044 Sum_probs=54.3
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..|+.+...+ ++.-+|+..|.-.. .-...+ +.... .+....++ ..+
T Consensus 59 ~vLdiG~G~G~~~~~la~~~--------------~~~~~v~~vD~~~~-~~~~a~------~~~~~-~g~~~~~i--~~~ 114 (221)
T 3dr5_A 59 GAIAITPAAGLVGLYILNGL--------------ADNTTLTCIDPESE-HQRQAK------ALFRE-AGYSPSRV--RFL 114 (221)
T ss_dssp EEEEESTTHHHHHHHHHHHS--------------CTTSEEEEECSCHH-HHHHHH------HHHHH-TTCCGGGE--EEE
T ss_pred CEEEEcCCchHHHHHHHHhC--------------CCCCEEEEEECCHH-HHHHHH------HHHHH-cCCCcCcE--EEE
Confidence 79999999999998665421 12356666664211 111111 11111 11100112 223
Q ss_pred CCcccccc--CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEE
Q 045960 83 PGSFYTRL--FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVL 152 (300)
Q Consensus 83 pgSFy~~l--~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl 152 (300)
-|...+-+ ++++++|++|+....+ ++..+|+.-.+=|+|||++++
T Consensus 115 ~gda~~~l~~~~~~~fD~V~~d~~~~-------------------------~~~~~l~~~~~~LkpGG~lv~ 161 (221)
T 3dr5_A 115 LSRPLDVMSRLANDSYQLVFGQVSPM-------------------------DLKALVDAAWPLLRRGGALVL 161 (221)
T ss_dssp CSCHHHHGGGSCTTCEEEEEECCCTT-------------------------THHHHHHHHHHHEEEEEEEEE
T ss_pred EcCHHHHHHHhcCCCcCeEEEcCcHH-------------------------HHHHHHHHHHHHcCCCcEEEE
Confidence 33333322 3478999999864211 134466666788999999987
No 164
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=96.34 E-value=0.023 Score=46.22 Aligned_cols=72 Identities=13% Similarity=0.058 Sum_probs=39.7
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..++.+.. +..+|+..|.-.. .-... ...... .+. .+ +..+
T Consensus 38 ~vLdiG~G~G~~~~~l~~-----------------~~~~v~~vD~~~~-~~~~a------~~~~~~-~~~--~~--~~~~ 88 (183)
T 2yxd_A 38 VVVDVGCGSGGMTVEIAK-----------------RCKFVYAIDYLDG-AIEVT------KQNLAK-FNI--KN--CQII 88 (183)
T ss_dssp EEEEESCCCSHHHHHHHT-----------------TSSEEEEEECSHH-HHHHH------HHHHHH-TTC--CS--EEEE
T ss_pred EEEEeCCCCCHHHHHHHh-----------------cCCeEEEEeCCHH-HHHHH------HHHHHH-cCC--Cc--EEEE
Confidence 799999999998876542 1246666663211 00000 111111 111 12 2224
Q ss_pred CCccccccCCCCcccEEEeccc
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYA 104 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~a 104 (300)
-+.+.. .+|++++|+++++..
T Consensus 89 ~~d~~~-~~~~~~~D~i~~~~~ 109 (183)
T 2yxd_A 89 KGRAED-VLDKLEFNKAFIGGT 109 (183)
T ss_dssp ESCHHH-HGGGCCCSEEEECSC
T ss_pred ECCccc-cccCCCCcEEEECCc
Confidence 455555 567789999999877
No 165
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=96.32 E-value=0.0028 Score=57.43 Aligned_cols=50 Identities=14% Similarity=0.174 Sum_probs=32.6
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCc--eeEEEEee
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQG--RMVLTLLY 156 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG--~~vl~~~g 156 (300)
+|++++|+|+|..+ |.... +.+.. .+.+ ..|+.-.+-|+||| .+++....
T Consensus 136 l~~~~fD~V~sd~~-~~~~~--------~~~d~------~~~l-~~L~~~~r~LkpGG~~~fv~kv~~ 187 (265)
T 2oxt_A 136 LPVERTDVIMCDVG-ESSPK--------WSVES------ERTI-KILELLEKWKVKNPSADFVVKVLC 187 (265)
T ss_dssp SCCCCCSEEEECCC-CCCSC--------HHHHH------HHHH-HHHHHHHHHHHHCTTCEEEEEESC
T ss_pred CCCCCCcEEEEeCc-ccCCc--------cchhH------HHHH-HHHHHHHHHhccCCCeEEEEEeCC
Confidence 67889999999888 65222 11100 0011 26777778899999 88886654
No 166
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=96.26 E-value=0.0069 Score=54.69 Aligned_cols=116 Identities=14% Similarity=0.072 Sum_probs=63.8
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCC---CCceee
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHE---FGSCFV 79 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~---~~~~f~ 79 (300)
+|.|+||++|..++.+.. .+ .-+|+..|+++.+.-.+.+.--.. + .....+.. ..++-+
T Consensus 82 ~vLDlG~G~G~~~~~~a~------------~~----~~~v~~~D~s~~~~~~~a~~n~~~-N-~~~~~~~~~~~~~~v~~ 143 (281)
T 3bzb_A 82 TVCELGAGAGLVSIVAFL------------AG----ADQVVATDYPDPEILNSLESNIRE-H-TANSCSSETVKRASPKV 143 (281)
T ss_dssp EEEETTCTTSHHHHHHHH------------TT----CSEEEEEECSCHHHHHHHHHHHHT-T-CC----------CCCEE
T ss_pred eEEEecccccHHHHHHHH------------cC----CCEEEEEeCCCHHHHHHHHHHHHH-h-hhhhcccccCCCCCeEE
Confidence 799999999988764321 11 137888887544333333211000 0 00000000 012222
Q ss_pred e-ecCCccccccC---CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhc---c--Ccee
Q 045960 80 A-ASPGSFYTRLF---PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELK---S--QGRM 150 (300)
Q Consensus 80 ~-~vpgSFy~~l~---P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~---~--GG~~ 150 (300)
. ..-|.....+. +.+++|+|+++.++|+... ...+|+.-.+-|+ | ||++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~fD~Ii~~dvl~~~~~----------------------~~~ll~~l~~~Lk~~~p~~gG~l 201 (281)
T 3bzb_A 144 VPYRWGDSPDSLQRCTGLQRFQVVLLADLLSFHQA----------------------HDALLRSVKMLLALPANDPTAVA 201 (281)
T ss_dssp EECCTTSCTHHHHHHHSCSSBSEEEEESCCSCGGG----------------------HHHHHHHHHHHBCCTTTCTTCEE
T ss_pred EEecCCCccHHHHhhccCCCCCEEEEeCcccChHH----------------------HHHHHHHHHHHhcccCCCCCCEE
Confidence 1 12222223333 6789999999999998433 5566777777899 9 9999
Q ss_pred EEEEeecC
Q 045960 151 VLTLLYND 158 (300)
Q Consensus 151 vl~~~g~~ 158 (300)
++.+..+.
T Consensus 202 ~v~~~~~~ 209 (281)
T 3bzb_A 202 LVTFTHHR 209 (281)
T ss_dssp EEEECC--
T ss_pred EEEEEeee
Confidence 88876543
No 167
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=96.22 E-value=0.01 Score=55.38 Aligned_cols=103 Identities=15% Similarity=0.178 Sum_probs=54.9
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+.. . +..+|+.-|.. ..-...+ +.... .+.. .++- .
T Consensus 52 ~~VLDiGcGtG~ls~~la~--------~--------g~~~V~~vD~s--~~~~~a~------~~~~~-~~l~-~~v~--~ 103 (348)
T 2y1w_A 52 KIVLDVGCGSGILSFFAAQ--------A--------GARKIYAVEAS--TMAQHAE------VLVKS-NNLT-DRIV--V 103 (348)
T ss_dssp CEEEEETCTTSHHHHHHHH--------T--------TCSEEEEEECS--THHHHHH------HHHHH-TTCT-TTEE--E
T ss_pred CEEEEcCCCccHHHHHHHh--------C--------CCCEEEEECCH--HHHHHHH------HHHHH-cCCC-CcEE--E
Confidence 3799999999987765432 1 12478888863 2222221 11111 1110 1221 1
Q ss_pred cCCccccccCCCCcccEEEeccccc-cccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALH-WLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alH-WLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+.+.+-.--+| +++|+++|...+| |... ++...|..-.+-|+|||++++..
T Consensus 104 ~~~d~~~~~~~-~~~D~Ivs~~~~~~~~~~---------------------~~~~~l~~~~~~LkpgG~li~~~ 155 (348)
T 2y1w_A 104 IPGKVEEVSLP-EQVDIIISEPMGYMLFNE---------------------RMLESYLHAKKYLKPSGNMFPTI 155 (348)
T ss_dssp EESCTTTCCCS-SCEEEEEECCCBTTBTTT---------------------SHHHHHHHGGGGEEEEEEEESCE
T ss_pred EEcchhhCCCC-CceeEEEEeCchhcCChH---------------------HHHHHHHHHHhhcCCCeEEEEec
Confidence 23333322234 6899999997654 4221 12223333348899999998654
No 168
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=96.21 E-value=0.02 Score=49.80 Aligned_cols=42 Identities=12% Similarity=0.253 Sum_probs=30.3
Q ss_pred cccCCC--CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 88 TRLFPH--NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 88 ~~l~P~--~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
.+-||. +++|++++.... . ++..+|+.-.+-|+|||++++.-
T Consensus 138 ~~~f~~~~~~fD~I~~~~~~---~----------------------~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 138 ASDFAFGPSSIDLFFLDADK---E----------------------NYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp GTTTCCSTTCEEEEEECSCG---G----------------------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred cccccCCCCCcCEEEEeCCH---H----------------------HHHHHHHHHHHHcCCCeEEEEEc
Confidence 345776 899999987431 1 13456677778899999999864
No 169
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=96.21 E-value=0.0054 Score=54.17 Aligned_cols=39 Identities=15% Similarity=0.107 Sum_probs=28.9
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecC
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYND 158 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~ 158 (300)
+|++++|+|+++.+.+. |+.-.+-|+|||++++...+..
T Consensus 144 ~~~~~fD~v~~~~~~~~-----------------------------l~~~~~~L~pgG~l~~~~~~~~ 182 (269)
T 1p91_A 144 FSDTSMDAIIRIYAPCK-----------------------------AEELARVVKPGGWVITATPGPR 182 (269)
T ss_dssp BCTTCEEEEEEESCCCC-----------------------------HHHHHHHEEEEEEEEEEEECTT
T ss_pred CCCCceeEEEEeCChhh-----------------------------HHHHHHhcCCCcEEEEEEcCHH
Confidence 67889999998755222 3335567999999999987654
No 170
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=96.17 E-value=0.00055 Score=59.70 Aligned_cols=80 Identities=14% Similarity=0.038 Sum_probs=44.0
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+... + .+|+..|+-..= .+.. ...... .+.. .++ ..
T Consensus 80 ~~vLD~gcG~G~~~~~la~~------------~-----~~v~~vD~s~~~----~~~a---~~~~~~-~~~~-~~~--~~ 131 (241)
T 3gdh_A 80 DVVVDAFCGVGGNTIQFALT------------G-----MRVIAIDIDPVK----IALA---RNNAEV-YGIA-DKI--EF 131 (241)
T ss_dssp SEEEETTCTTSHHHHHHHHT------------T-----CEEEEEESCHHH----HHHH---HHHHHH-TTCG-GGE--EE
T ss_pred CEEEECccccCHHHHHHHHc------------C-----CEEEEEECCHHH----HHHH---HHHHHH-cCCC-cCe--EE
Confidence 37999999999999876531 1 455655532110 0000 011111 1100 111 22
Q ss_pred cCCccccccCCCCcccEEEeccccccccC
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSR 110 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~ 110 (300)
+-+.+..-. |++++|+|+++..+||...
T Consensus 132 ~~~d~~~~~-~~~~~D~v~~~~~~~~~~~ 159 (241)
T 3gdh_A 132 ICGDFLLLA-SFLKADVVFLSPPWGGPDY 159 (241)
T ss_dssp EESCHHHHG-GGCCCSEEEECCCCSSGGG
T ss_pred EECChHHhc-ccCCCCEEEECCCcCCcch
Confidence 334444433 7789999999999999765
No 171
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=96.17 E-value=0.0089 Score=53.40 Aligned_cols=100 Identities=18% Similarity=0.218 Sum_probs=56.8
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+.+.+ + |..+|+..|.-.. .-...+ ..... .+.. .+ +..+
T Consensus 115 ~VLDiG~G~G~~~~~la~~~-----------~---~~~~v~~vD~s~~-~~~~a~------~~~~~-~~~~-~~--v~~~ 169 (277)
T 1o54_A 115 RIIDTGVGSGAMCAVLARAV-----------G---SSGKVFAYEKREE-FAKLAE------SNLTK-WGLI-ER--VTIK 169 (277)
T ss_dssp EEEEECCTTSHHHHHHHHHT-----------T---TTCEEEEECCCHH-HHHHHH------HHHHH-TTCG-GG--EEEE
T ss_pred EEEEECCcCCHHHHHHHHHh-----------C---CCcEEEEEECCHH-HHHHHH------HHHHH-cCCC-CC--EEEE
Confidence 79999999998887654321 1 2357777774211 111111 11111 1100 12 2234
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-+.+... +|++++|++++. .|. + ..+|+.-.+-|+|||++++...
T Consensus 170 ~~d~~~~-~~~~~~D~V~~~--------~~~----~---------------~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 170 VRDISEG-FDEKDVDALFLD--------VPD----P---------------WNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CCCGGGC-CSCCSEEEEEEC--------CSC----G---------------GGTHHHHHHHEEEEEEEEEEES
T ss_pred ECCHHHc-ccCCccCEEEEC--------CcC----H---------------HHHHHHHHHHcCCCCEEEEEeC
Confidence 4555544 788899999983 232 1 2445556678999999998874
No 172
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=96.17 E-value=0.011 Score=50.47 Aligned_cols=17 Identities=24% Similarity=0.104 Sum_probs=14.7
Q ss_pred EEEeeCCCCCcccHHHH
Q 045960 3 RFADLGCSSGPNALLPT 19 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~ 19 (300)
+|.|+||++|..++.++
T Consensus 57 ~vLDlgcG~G~~~~~l~ 73 (202)
T 2fpo_A 57 QCLDCFAGSGALGLEAL 73 (202)
T ss_dssp EEEETTCTTCHHHHHHH
T ss_pred eEEEeCCCcCHHHHHHH
Confidence 79999999999888654
No 173
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=96.16 E-value=0.0056 Score=52.92 Aligned_cols=107 Identities=16% Similarity=0.065 Sum_probs=57.9
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCC---CCCcee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGH---EFGSCF 78 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~---~~~~~f 78 (300)
-+|.|+||++|..+..+.... .. .+ ..+.-+|+..|.-.. .-...+ ...... +. ...++-
T Consensus 86 ~~VLdiG~G~G~~~~~la~~~----~~----~~-~~~~~~v~~vD~~~~-~~~~a~------~~~~~~-~~~~~~~~~v~ 148 (227)
T 1r18_A 86 ARILDVGSGSGYLTACFYRYI----KA----KG-VDADTRIVGIEHQAE-LVRRSK------ANLNTD-DRSMLDSGQLL 148 (227)
T ss_dssp CEEEEESCTTSHHHHHHHHHH----HH----SC-CCTTCEEEEEESCHH-HHHHHH------HHHHHH-HHHHHHHTSEE
T ss_pred CEEEEECCCccHHHHHHHHhc----cc----cc-CCccCEEEEEEcCHH-HHHHHH------HHHHhc-CccccCCCceE
Confidence 379999999999888654321 11 01 112346666664211 111111 111000 00 001221
Q ss_pred eeecCCccccccCCC-CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 79 VAASPGSFYTRLFPH-NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 79 ~~~vpgSFy~~l~P~-~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
.+-+.... -+|. +++|++++..++||+ |. .-.+-|+|||+|++.+..
T Consensus 149 --~~~~d~~~-~~~~~~~fD~I~~~~~~~~~---~~-------------------------~~~~~LkpgG~lvi~~~~ 196 (227)
T 1r18_A 149 --IVEGDGRK-GYPPNAPYNAIHVGAAAPDT---PT-------------------------ELINQLASGGRLIVPVGP 196 (227)
T ss_dssp --EEESCGGG-CCGGGCSEEEEEECSCBSSC---CH-------------------------HHHHTEEEEEEEEEEESC
T ss_pred --EEECCccc-CCCcCCCccEEEECCchHHH---HH-------------------------HHHHHhcCCCEEEEEEec
Confidence 12234444 3454 789999999999983 31 134569999999999864
No 174
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=96.13 E-value=0.013 Score=51.99 Aligned_cols=129 Identities=12% Similarity=0.081 Sum_probs=70.4
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+...+ + |..+|+.-|.-. +.-...+ .......+.-..+ +..+
T Consensus 102 ~vLdiG~G~G~~~~~l~~~~-----------~---~~~~v~~vD~~~-~~~~~a~------~~~~~~~g~~~~~--v~~~ 158 (280)
T 1i9g_A 102 RVLEAGAGSGALTLSLLRAV-----------G---PAGQVISYEQRA-DHAEHAR------RNVSGCYGQPPDN--WRLV 158 (280)
T ss_dssp EEEEECCTTSHHHHHHHHHH-----------C---TTSEEEEECSCH-HHHHHHH------HHHHHHHTSCCTT--EEEE
T ss_pred EEEEEcccccHHHHHHHHHh-----------C---CCCEEEEEeCCH-HHHHHHH------HHHHHhcCCCCCc--EEEE
Confidence 79999999999887554321 1 235667666411 1111111 1111100100012 2234
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHA 162 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~ 162 (300)
-+.+....+|++++|++++.. |. + ..+|+.-.+-|+|||++++.....
T Consensus 159 ~~d~~~~~~~~~~~D~v~~~~--------~~----~---------------~~~l~~~~~~L~pgG~l~~~~~~~----- 206 (280)
T 1i9g_A 159 VSDLADSELPDGSVDRAVLDM--------LA----P---------------WEVLDAVSRLLVAGGVLMVYVATV----- 206 (280)
T ss_dssp CSCGGGCCCCTTCEEEEEEES--------SC----G---------------GGGHHHHHHHEEEEEEEEEEESSH-----
T ss_pred ECchHhcCCCCCceeEEEECC--------cC----H---------------HHHHHHHHHhCCCCCEEEEEeCCH-----
Confidence 566666667889999999832 21 1 135666678899999999987533
Q ss_pred CCchHHHHHHHHHHH-cCCCchhhhccc
Q 045960 163 TPGEPMLMVLKDMIS-EGLAEESKVKSF 189 (300)
Q Consensus 163 ~~~~~l~~al~~mv~-eG~i~~e~~d~f 189 (300)
+.+.+.+..|.. .|....+.++.+
T Consensus 207 ---~~~~~~~~~l~~~~~f~~~~~~~~~ 231 (280)
T 1i9g_A 207 ---TQLSRIVEALRAKQCWTEPRAWETL 231 (280)
T ss_dssp ---HHHHHHHHHHHHHSSBCCCEEECCC
T ss_pred ---HHHHHHHHHHHhcCCcCCcEEEEEe
Confidence 334455555554 455444444443
No 175
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=96.13 E-value=0.1 Score=44.64 Aligned_cols=20 Identities=15% Similarity=0.180 Sum_probs=16.5
Q ss_pred HHHHHHHHhhccCceeEEEE
Q 045960 135 TFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 135 ~fL~~Ra~EL~~GG~~vl~~ 154 (300)
.+|+.-.+-|+|||++++.+
T Consensus 159 ~~l~~~~~~LkpgG~l~~~~ 178 (227)
T 1g8a_A 159 ILIDNAEVYLKRGGYGMIAV 178 (227)
T ss_dssp HHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHHHHHhcCCCCEEEEEE
Confidence 45666788999999999984
No 176
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=96.11 E-value=0.018 Score=50.15 Aligned_cols=101 Identities=14% Similarity=-0.039 Sum_probs=56.2
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+...+ + |..+|+.-|.-.. .-...+ .......+. .++- .+
T Consensus 99 ~vLdiG~G~G~~~~~l~~~~-----------~---~~~~v~~~D~~~~-~~~~a~------~~~~~~~g~--~~v~--~~ 153 (258)
T 2pwy_A 99 RVLEAGTGSGGLTLFLARAV-----------G---EKGLVESYEARPH-HLAQAE------RNVRAFWQV--ENVR--FH 153 (258)
T ss_dssp EEEEECCTTSHHHHHHHHHH-----------C---TTSEEEEEESCHH-HHHHHH------HHHHHHCCC--CCEE--EE
T ss_pred EEEEECCCcCHHHHHHHHHh-----------C---CCCEEEEEeCCHH-HHHHHH------HHHHHhcCC--CCEE--EE
Confidence 79999999999887654321 1 2346666664211 111110 111111011 2222 23
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
.+++..--+|++++|++++. + |. ...+|+.-.+-|+|||++++...
T Consensus 154 ~~d~~~~~~~~~~~D~v~~~----~----~~-------------------~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 154 LGKLEEAELEEAAYDGVALD----L----ME-------------------PWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp ESCGGGCCCCTTCEEEEEEE----S----SC-------------------GGGGHHHHHHHEEEEEEEEEEES
T ss_pred ECchhhcCCCCCCcCEEEEC----C----cC-------------------HHHHHHHHHHhCCCCCEEEEEeC
Confidence 34555433788899999972 2 32 12456666788999999998773
No 177
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=96.08 E-value=0.023 Score=52.01 Aligned_cols=133 Identities=14% Similarity=0.035 Sum_probs=64.2
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhh-cChhhHHHHhhhcCCCCCceeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFK-SLPSFYERLRTEKGHEFGSCFVA 80 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~-~l~~~~~~~~~~~~~~~~~~f~~ 80 (300)
-+|.|+||++|..+..++. ..+.-+|..-|+-.. .-.+.+ .++..... ...+ .+--+..
T Consensus 85 ~~VLdiG~G~G~~~~~l~~---------------~~~~~~V~~VDid~~-vi~~ar~~~~~~~~~---~~~~-~rv~~~~ 144 (294)
T 3adn_A 85 KHVLIIGGGDGAMLREVTR---------------HKNVESITMVEIDAG-VVSFCRQYLPNHNAG---SYDD-PRFKLVI 144 (294)
T ss_dssp CEEEEESCTTCHHHHHHHT---------------CTTCCEEEEECSCTT-HHHHHHHHCHHHHSS---CTTC-TTCCEEC
T ss_pred CEEEEEeCChhHHHHHHHh---------------CCCCCEEEEEECCHH-HHHHHHHhhhhcccc---cccC-CceEEEE
Confidence 3799999999987654331 122356667775332 112221 12211000 0000 0112222
Q ss_pred ecCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCC
Q 045960 81 ASPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNF 160 (300)
Q Consensus 81 ~vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~ 160 (300)
+=...|-.. +.+++|+|++...-+| .|.. ..| -..|++.-.+-|+|||+|+++....-.
T Consensus 145 ~D~~~~l~~--~~~~fDvIi~D~~~p~---~~~~--------~l~-------~~~f~~~~~~~LkpgG~lv~~~~s~~~- 203 (294)
T 3adn_A 145 DDGVNFVNQ--TSQTFDVIISDCTDPI---GPGE--------SLF-------TSAFYEGCKRCLNPGGIFVAQNGVCFL- 203 (294)
T ss_dssp SCSCC---C--CCCCEEEEEECC---------------------C-------CHHHHHHHHHTEEEEEEEEEEEEECSS-
T ss_pred ChHHHHHhh--cCCCccEEEECCCCcc---Ccch--------hcc-------HHHHHHHHHHhcCCCCEEEEecCCccc-
Confidence 222333322 5788999999877666 2210 000 156777788999999999998743211
Q ss_pred CCCCchHHHHHHHHHHHc
Q 045960 161 HATPGEPMLMVLKDMISE 178 (300)
Q Consensus 161 ~~~~~~~l~~al~~mv~e 178 (300)
.. +.+...+..|.+.
T Consensus 204 ~~---~~~~~~~~~l~~~ 218 (294)
T 3adn_A 204 QQ---EEAIDSHRKLSHY 218 (294)
T ss_dssp CC---HHHHHHHHHHHHH
T ss_pred ch---HHHHHHHHHHHHH
Confidence 11 4455555554433
No 178
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=96.08 E-value=0.0034 Score=57.20 Aligned_cols=50 Identities=18% Similarity=0.109 Sum_probs=32.7
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCc--eeEEEEee
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQG--RMVLTLLY 156 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG--~~vl~~~g 156 (300)
+|++++|+|+|..+ |+... +.+. . .+.+ ..|+.-.+-|+||| .+++....
T Consensus 144 l~~~~fD~Vvsd~~-~~~~~--------~~~d-~-----~~~l-~~L~~~~r~LkpGG~~~~v~~~~~ 195 (276)
T 2wa2_A 144 MEPFQADTVLCDIG-ESNPT--------AAVE-A-----SRTL-TVLNVISRWLEYNQGCGFCVKVLN 195 (276)
T ss_dssp CCCCCCSEEEECCC-CCCSC--------HHHH-H-----HHHH-HHHHHHHHHHHHSTTCEEEEEESC
T ss_pred CCCCCcCEEEECCC-cCCCc--------hhhh-H-----HHHH-HHHHHHHHHhccCCCcEEEEEeCC
Confidence 67889999999988 66322 1110 0 0011 26777778899999 99886654
No 179
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=96.07 E-value=0.013 Score=53.78 Aligned_cols=43 Identities=26% Similarity=0.147 Sum_probs=29.1
Q ss_pred CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHH--HHHHHHHHHhhccCceeEEEE
Q 045960 92 PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDF--STFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~--~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+++++|+|++....++ .|. ..+ ..||+.-.+-|+|||+|++..
T Consensus 166 ~~~~fDvIi~d~~~~~---~~~-----------------~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 166 PDNTYDVVIIDTTDPA---GPA-----------------SKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp CTTCEEEEEEECC-----------------------------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred cCCceeEEEECCCCcc---ccc-----------------hhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 6789999999887776 221 011 467777888999999999885
No 180
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=96.06 E-value=0.018 Score=49.80 Aligned_cols=99 Identities=13% Similarity=0.152 Sum_probs=55.7
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCC---chHHHhhcChhhHHHHhhhcCCCCCceee
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRS---DFNTVFKSLPSFYERLRTEKGHEFGSCFV 79 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~N---DFn~Lf~~l~~~~~~~~~~~~~~~~~~f~ 79 (300)
+|.|+||++|..++.+.+.. + |.-+|+.-|+-.. +.....+ .. .++-
T Consensus 80 ~vLDlG~G~G~~~~~la~~~-----------g---~~~~v~gvD~s~~~i~~~~~~a~-----------~~----~~v~- 129 (233)
T 2ipx_A 80 KVLYLGAASGTTVSHVSDIV-----------G---PDGLVYAVEFSHRSGRDLINLAK-----------KR----TNII- 129 (233)
T ss_dssp EEEEECCTTSHHHHHHHHHH-----------C---TTCEEEEECCCHHHHHHHHHHHH-----------HC----TTEE-
T ss_pred EEEEEcccCCHHHHHHHHHh-----------C---CCcEEEEEECCHHHHHHHHHHhh-----------cc----CCeE-
Confidence 79999999999887665431 1 2245666664321 1111111 00 1221
Q ss_pred eecCCccccc---cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 80 AASPGSFYTR---LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 80 ~~vpgSFy~~---l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
.+-+.+... -++.+++|++++..+ .|. ....++..-.+-|+|||++++.+..
T Consensus 130 -~~~~d~~~~~~~~~~~~~~D~V~~~~~------~~~------------------~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 130 -PVIEDARHPHKYRMLIAMVDVIFADVA------QPD------------------QTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp -EECSCTTCGGGGGGGCCCEEEEEECCC------CTT------------------HHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred -EEEcccCChhhhcccCCcEEEEEEcCC------Ccc------------------HHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 123343331 135678999999554 111 1234566677889999999997653
No 181
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=96.00 E-value=0.025 Score=52.67 Aligned_cols=49 Identities=14% Similarity=0.091 Sum_probs=35.3
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
+|++++|+|++....||- .|..+. -..|++.-.+-|+|||+|+++....
T Consensus 155 ~~~~~fDvIi~D~~~~~~--~~~~L~----------------t~efl~~~~r~LkpgGvlv~~~~~~ 203 (317)
T 3gjy_A 155 FTPASRDVIIRDVFAGAI--TPQNFT----------------TVEFFEHCHRGLAPGGLYVANCGDH 203 (317)
T ss_dssp CCTTCEEEEEECCSTTSC--CCGGGS----------------BHHHHHHHHHHEEEEEEEEEEEEEC
T ss_pred ccCCCCCEEEECCCCccc--cchhhh----------------HHHHHHHHHHhcCCCcEEEEEecCC
Confidence 367889999998877762 232110 1467777889999999999998643
No 182
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=95.98 E-value=0.023 Score=49.13 Aligned_cols=36 Identities=14% Similarity=0.308 Sum_probs=28.4
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEE
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLT 153 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~ 153 (300)
++++|+|++....+ +...+|+.-.+-|+|||++++.
T Consensus 124 ~~~fD~I~~~~~~~-------------------------~~~~~l~~~~~~L~pgG~lv~~ 159 (233)
T 2gpy_A 124 YPLFDVLFIDAAKG-------------------------QYRRFFDMYSPMVRPGGLILSD 159 (233)
T ss_dssp SCCEEEEEEEGGGS-------------------------CHHHHHHHHGGGEEEEEEEEEE
T ss_pred CCCccEEEECCCHH-------------------------HHHHHHHHHHHHcCCCeEEEEE
Confidence 57899999876543 2466777778899999999886
No 183
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=95.98 E-value=0.0036 Score=54.73 Aligned_cols=102 Identities=13% Similarity=0.024 Sum_probs=58.9
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||+.|+.++..+. ..|..+|.-.|. |.-.-.+-. ... ...|.. .++-+
T Consensus 51 ~~VLDlGCG~GplAl~l~~---------------~~p~a~~~A~Di-----~~~~leiar--~~~-~~~g~~-~~v~~-- 104 (200)
T 3fzg_A 51 SSILDFGCGFNPLALYQWN---------------ENEKIIYHAYDI-----DRAEIAFLS--SII-GKLKTT-IKYRF-- 104 (200)
T ss_dssp SEEEEETCTTHHHHHHHHC---------------SSCCCEEEEECS-----CHHHHHHHH--HHH-HHSCCS-SEEEE--
T ss_pred CeEEEecCCCCHHHHHHHh---------------cCCCCEEEEEeC-----CHHHHHHHH--HHH-HhcCCC-ccEEE--
Confidence 3799999999999986532 234567777763 221111110 111 111211 12332
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
...-.. .|+.++|+|.++..||-|.+.+. -+..-.+.|+|||.+ +++.
T Consensus 105 --~d~~~~-~~~~~~DvVLa~k~LHlL~~~~~----------------------al~~v~~~L~pggvf-ISfp 152 (200)
T 3fzg_A 105 --LNKESD-VYKGTYDVVFLLKMLPVLKQQDV----------------------NILDFLQLFHTQNFV-ISFP 152 (200)
T ss_dssp --ECCHHH-HTTSEEEEEEEETCHHHHHHTTC----------------------CHHHHHHTCEEEEEE-EEEE
T ss_pred --eccccc-CCCCCcChhhHhhHHHhhhhhHH----------------------HHHHHHHHhCCCCEE-EEeC
Confidence 222223 68889999999999999954222 122367889999876 5665
No 184
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=95.96 E-value=0.014 Score=49.68 Aligned_cols=51 Identities=12% Similarity=0.008 Sum_probs=31.7
Q ss_pred CcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 94 NFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
+++|+|+|..+..+.-. ..... ..........|+.-.+-|+|||+|++.+.
T Consensus 90 ~~~D~Vlsd~~~~~~g~--------~~~d~---~~~~~l~~~~l~~a~~~LkpGG~lv~k~~ 140 (191)
T 3dou_A 90 EKVDDVVSDAMAKVSGI--------PSRDH---AVSYQIGQRVMEIAVRYLRNGGNVLLKQF 140 (191)
T ss_dssp SSEEEEEECCCCCCCSC--------HHHHH---HHHHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CcceEEecCCCcCCCCC--------cccCH---HHHHHHHHHHHHHHHHHccCCCEEEEEEc
Confidence 38999999875443111 11110 11223345677777788999999998775
No 185
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=95.96 E-value=0.029 Score=49.44 Aligned_cols=105 Identities=11% Similarity=0.078 Sum_probs=54.3
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCce-eee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSC-FVA 80 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~-f~~ 80 (300)
-+|.|+||++|..++.+... -++..+|+.-|+-.. .-... ...... .+.. .++ +..
T Consensus 65 ~~VLdiG~G~G~~~~~la~~--------------~~~~~~v~~vD~s~~-~~~~a------~~~~~~-~g~~-~~v~~~~ 121 (248)
T 3tfw_A 65 KRILEIGTLGGYSTIWMARE--------------LPADGQLLTLEADAH-HAQVA------RENLQL-AGVD-QRVTLRE 121 (248)
T ss_dssp SEEEEECCTTSHHHHHHHTT--------------SCTTCEEEEEECCHH-HHHHH------HHHHHH-TTCT-TTEEEEE
T ss_pred CEEEEecCCchHHHHHHHHh--------------CCCCCEEEEEECCHH-HHHHH------HHHHHH-cCCC-CcEEEEE
Confidence 37999999999998855421 112466777775211 00000 011111 1110 122 222
Q ss_pred ecCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 81 ASPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 81 ~vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+=...+...+-...++|+|++.....+ ...+|+.-.+-|+|||++++.-
T Consensus 122 ~d~~~~l~~~~~~~~fD~V~~d~~~~~-------------------------~~~~l~~~~~~LkpGG~lv~~~ 170 (248)
T 3tfw_A 122 GPALQSLESLGECPAFDLIFIDADKPN-------------------------NPHYLRWALRYSRPGTLIIGDN 170 (248)
T ss_dssp SCHHHHHHTCCSCCCCSEEEECSCGGG-------------------------HHHHHHHHHHTCCTTCEEEEEC
T ss_pred cCHHHHHHhcCCCCCeEEEEECCchHH-------------------------HHHHHHHHHHhcCCCeEEEEeC
Confidence 111112223323468999998653211 3446666678999999988753
No 186
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=95.95 E-value=0.01 Score=48.92 Aligned_cols=45 Identities=9% Similarity=-0.096 Sum_probs=28.5
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecC
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYND 158 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~ 158 (300)
++++|+++++..+|+... +.+ ...+. ..+-|+|||++++......
T Consensus 114 ~~~fD~i~~~~~~~~~~~--------~~~------------~~~l~-~~~~L~~gG~l~~~~~~~~ 158 (187)
T 2fhp_A 114 KLQFDLVLLDPPYAKQEI--------VSQ------------LEKML-ERQLLTNEAVIVCETDKTV 158 (187)
T ss_dssp TCCEEEEEECCCGGGCCH--------HHH------------HHHHH-HTTCEEEEEEEEEEEETTC
T ss_pred CCCCCEEEECCCCCchhH--------HHH------------HHHHH-HhcccCCCCEEEEEeCCcc
Confidence 788999999877663111 111 11122 2566999999998876543
No 187
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=95.94 E-value=0.022 Score=50.60 Aligned_cols=99 Identities=17% Similarity=0.081 Sum_probs=56.3
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+... .|..+|+.-|.-. +.-...+ +.. ...+ ..+ +..+
T Consensus 83 ~vLDiG~G~G~~~i~la~~---------------~~~~~v~~vD~s~-~~~~~a~------~~~-~~~~--l~~--v~~~ 135 (249)
T 3g89_A 83 RVLDLGTGAGFPGLPLKIV---------------RPELELVLVDATR-KKVAFVE------RAI-EVLG--LKG--ARAL 135 (249)
T ss_dssp EEEEETCTTTTTHHHHHHH---------------CTTCEEEEEESCH-HHHHHHH------HHH-HHHT--CSS--EEEE
T ss_pred EEEEEcCCCCHHHHHHHHH---------------CCCCEEEEEECCH-HHHHHHH------HHH-HHhC--CCc--eEEE
Confidence 7999999999998865421 1346777777321 1111111 111 1111 123 2223
Q ss_pred CCccccccC---CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 83 PGSFYTRLF---PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 83 pgSFy~~l~---P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
-+....-.. +++++|+|+|.+.- ++..+++.-.+=|+|||++++.-
T Consensus 136 ~~d~~~~~~~~~~~~~fD~I~s~a~~--------------------------~~~~ll~~~~~~LkpgG~l~~~~ 184 (249)
T 3g89_A 136 WGRAEVLAREAGHREAYARAVARAVA--------------------------PLCVLSELLLPFLEVGGAAVAMK 184 (249)
T ss_dssp ECCHHHHTTSTTTTTCEEEEEEESSC--------------------------CHHHHHHHHGGGEEEEEEEEEEE
T ss_pred ECcHHHhhcccccCCCceEEEECCcC--------------------------CHHHHHHHHHHHcCCCeEEEEEe
Confidence 344433222 24789999986421 14567777888999999998765
No 188
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=95.92 E-value=0.014 Score=49.93 Aligned_cols=18 Identities=11% Similarity=0.242 Sum_probs=15.2
Q ss_pred eEEEeeCCCCCcccHHHH
Q 045960 2 IRFADLGCSSGPNALLPT 19 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~ 19 (300)
-+|.|+||++|..++.+.
T Consensus 60 ~~vLdiG~G~G~~~~~la 77 (223)
T 3duw_A 60 RNILEIGTLGGYSTIWLA 77 (223)
T ss_dssp SEEEEECCTTSHHHHHHH
T ss_pred CEEEEecCCccHHHHHHH
Confidence 379999999999988654
No 189
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=95.92 E-value=0.014 Score=50.00 Aligned_cols=44 Identities=18% Similarity=0.111 Sum_probs=30.7
Q ss_pred ccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 85 SFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 85 SFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
.......+.+++|++++...++. ++. .-.+-|+|||++++.+..
T Consensus 141 d~~~~~~~~~~fD~i~~~~~~~~---~~~-------------------------~~~~~LkpgG~lv~~~~~ 184 (226)
T 1i1n_A 141 DGRMGYAEEAPYDAIHVGAAAPV---VPQ-------------------------ALIDQLKPGGRLILPVGP 184 (226)
T ss_dssp CGGGCCGGGCCEEEEEECSBBSS---CCH-------------------------HHHHTEEEEEEEEEEESC
T ss_pred CcccCcccCCCcCEEEECCchHH---HHH-------------------------HHHHhcCCCcEEEEEEec
Confidence 33333345678999999988875 231 234679999999998753
No 190
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=95.90 E-value=0.013 Score=52.41 Aligned_cols=98 Identities=12% Similarity=0.116 Sum_probs=56.8
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhc-CCCCCceeeee
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEK-GHEFGSCFVAA 81 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~-~~~~~~~f~~~ 81 (300)
+|.|+||++|..++.+...+ .|..+|+.-|.-.. . +......... . + ..++ ..
T Consensus 113 ~VLD~G~G~G~~~~~la~~~--------------~~~~~v~~vD~s~~-~------~~~a~~~~~~-~~g--~~~v--~~ 166 (275)
T 1yb2_A 113 DILEVGVGSGNMSSYILYAL--------------NGKGTLTVVERDED-N------LKKAMDNLSE-FYD--IGNV--RT 166 (275)
T ss_dssp EEEEECCTTSHHHHHHHHHH--------------TTSSEEEEECSCHH-H------HHHHHHHHHT-TSC--CTTE--EE
T ss_pred EEEEecCCCCHHHHHHHHHc--------------CCCCEEEEEECCHH-H------HHHHHHHHHh-cCC--CCcE--EE
Confidence 79999999999887654422 12356777775221 0 0000111111 1 1 1222 22
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+-+.+.. .+|++++|++++ | +|. ...+|+.-.+-|+|||++++..
T Consensus 167 ~~~d~~~-~~~~~~fD~Vi~----~----~~~-------------------~~~~l~~~~~~LkpgG~l~i~~ 211 (275)
T 1yb2_A 167 SRSDIAD-FISDQMYDAVIA----D----IPD-------------------PWNHVQKIASMMKPGSVATFYL 211 (275)
T ss_dssp ECSCTTT-CCCSCCEEEEEE----C----CSC-------------------GGGSHHHHHHTEEEEEEEEEEE
T ss_pred EECchhc-cCcCCCccEEEE----c----CcC-------------------HHHHHHHHHHHcCCCCEEEEEe
Confidence 3455554 678889999998 2 332 1255666778899999999876
No 191
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=95.83 E-value=0.011 Score=54.41 Aligned_cols=45 Identities=11% Similarity=0.115 Sum_probs=30.9
Q ss_pred CCCcccEEEeccccc---cccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 92 PHNFLDFVYSSYALH---WLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 92 P~~sv~~~~Ss~alH---WLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
|..++|+|+|..+.| |..+ + .+.+ ..|..-.+-|||||.|++.+.
T Consensus 145 ~~~~fD~V~sd~~~~~g~~~~d-----------------~-~~~l-~~L~~~~~~LkpGG~~v~kv~ 192 (305)
T 2p41_A 145 PPERCDTLLCDIGESSPNPTVE-----------------A-GRTL-RVLNLVENWLSNNTQFCVKVL 192 (305)
T ss_dssp CCCCCSEEEECCCCCCSSHHHH-----------------H-HHHH-HHHHHHHHHCCTTCEEEEEES
T ss_pred CcCCCCEEEECCccccCcchhh-----------------H-HHHH-HHHHHHHHHhCCCCEEEEEeC
Confidence 678999999988764 4211 0 0011 366666789999999998664
No 192
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=95.81 E-value=0.0085 Score=49.35 Aligned_cols=17 Identities=35% Similarity=0.294 Sum_probs=14.5
Q ss_pred EEEeeCCCCCcccHHHH
Q 045960 3 RFADLGCSSGPNALLPT 19 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~ 19 (300)
+|.|+||++|..++.+.
T Consensus 34 ~vLDlGcG~G~~~~~l~ 50 (177)
T 2esr_A 34 RVLDLFAGSGGLAIEAV 50 (177)
T ss_dssp EEEEETCTTCHHHHHHH
T ss_pred eEEEeCCCCCHHHHHHH
Confidence 79999999999887543
No 193
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=95.76 E-value=0.0088 Score=55.16 Aligned_cols=49 Identities=12% Similarity=0.007 Sum_probs=34.3
Q ss_pred CCCcccEEEecccccc-ccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 92 PHNFLDFVYSSYALHW-LSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 92 P~~sv~~~~Ss~alHW-LS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
+++++|++++....|| ++..+..+ ....|++.-.+-|+|||+|++....
T Consensus 148 ~~~~fD~Ii~d~~~~~~~~~~~~~l----------------~~~~~l~~~~~~LkpgG~lv~~~~~ 197 (314)
T 1uir_A 148 TEERYDVVIIDLTDPVGEDNPARLL----------------YTVEFYRLVKAHLNPGGVMGMQTGM 197 (314)
T ss_dssp CCCCEEEEEEECCCCBSTTCGGGGG----------------SSHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred cCCCccEEEECCCCcccccCcchhc----------------cHHHHHHHHHHhcCCCcEEEEEccC
Confidence 4678999999998888 22211100 0256777778899999999998654
No 194
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=95.61 E-value=0.09 Score=48.86 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=22.8
Q ss_pred HHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 130 ESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 130 ~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
.+|+..+|+.-.+-|+|||.++++....
T Consensus 248 ~~~~~~ll~~~~~~LkpgG~lli~~~~~ 275 (332)
T 2igt_A 248 FDHLPLMLDICREILSPKALGLVLTAYS 275 (332)
T ss_dssp HHHHHHHHHHHHHTBCTTCCEEEEEECC
T ss_pred HHHHHHHHHHHHHhcCcCcEEEEEECCC
Confidence 4567888988889999999988877544
No 195
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=95.57 E-value=0.025 Score=48.30 Aligned_cols=22 Identities=9% Similarity=0.111 Sum_probs=16.9
Q ss_pred HHHHHHHHHHhhccCceeEEEE
Q 045960 133 FSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 133 ~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
...+|+.-.+-|+|||++++.-
T Consensus 153 ~~~~l~~~~~~L~pgG~lv~~~ 174 (225)
T 3tr6_A 153 TDLYYEESLKLLREGGLIAVDN 174 (225)
T ss_dssp HHHHHHHHHHHEEEEEEEEEEC
T ss_pred HHHHHHHHHHhcCCCcEEEEeC
Confidence 4556666778899999998753
No 196
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=95.49 E-value=0.067 Score=46.16 Aligned_cols=98 Identities=12% Similarity=0.109 Sum_probs=53.8
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|+|+||++|..++.+.+. ..+|+..|.-.. .-...+ ..... .+-. .+ +..+
T Consensus 94 ~vldiG~G~G~~~~~l~~~-----------------~~~v~~vD~~~~-~~~~a~------~~~~~-~~~~-~~--~~~~ 145 (248)
T 2yvl_A 94 RVLEFGTGSGALLAVLSEV-----------------AGEVWTFEAVEE-FYKTAQ------KNLKK-FNLG-KN--VKFF 145 (248)
T ss_dssp EEEEECCTTSHHHHHHHHH-----------------SSEEEEECSCHH-HHHHHH------HHHHH-TTCC-TT--EEEE
T ss_pred EEEEeCCCccHHHHHHHHh-----------------CCEEEEEecCHH-HHHHHH------HHHHH-cCCC-Cc--EEEE
Confidence 7999999999988766543 135555554211 101110 11111 1100 11 1223
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-+.+...+++++++|++++. .|. + ..+|+.-.+-|+|||++++...
T Consensus 146 ~~d~~~~~~~~~~~D~v~~~--------~~~----~---------------~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 146 NVDFKDAEVPEGIFHAAFVD--------VRE----P---------------WHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp CSCTTTSCCCTTCBSEEEEC--------SSC----G---------------GGGHHHHHHHBCTTCEEEEEES
T ss_pred EcChhhcccCCCcccEEEEC--------CcC----H---------------HHHHHHHHHHcCCCCEEEEEeC
Confidence 45555544477899999973 221 1 2344555678999999999874
No 197
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=95.43 E-value=0.019 Score=55.43 Aligned_cols=94 Identities=15% Similarity=0.069 Sum_probs=59.0
Q ss_pred eEEEeeCCC------CCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCC
Q 045960 2 IRFADLGCS------SGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFG 75 (300)
Q Consensus 2 ~~iaD~Gcs------~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~ 75 (300)
.+|.|+||+ +|..|+.++... .|..+|+--|+-.+= .+ . . +
T Consensus 218 ~rVLDIGCG~~~~~~TGG~Sl~la~~~--------------fP~a~V~GVDiSp~m---~~-----------~--~---~ 264 (419)
T 3sso_A 218 VRVLEIGVGGYKHPEWGGGSLRMWKSF--------------FPRGQIYGLDIMDKS---HV-----------D--E---L 264 (419)
T ss_dssp CEEEEECCSCTTCSSCCCHHHHHHHHH--------------CTTCEEEEEESSCCG---GG-----------C--B---T
T ss_pred CEEEEEecCCCcCCCCCHHHHHHHHHh--------------CCCCEEEEEECCHHH---hh-----------c--C---C
Confidence 489999999 777777554321 134678888875541 10 0 0 1
Q ss_pred ce-eeeecCCccccccCC------CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCc
Q 045960 76 SC-FVAASPGSFYTRLFP------HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQG 148 (300)
Q Consensus 76 ~~-f~~~vpgSFy~~l~P------~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG 148 (300)
++ |.. |....-=|+ ++++|+|+|..+ ||. .|...+|+.-.+-|||||
T Consensus 265 rI~fv~---GDa~dlpf~~~l~~~d~sFDlVisdgs-H~~----------------------~d~~~aL~el~rvLKPGG 318 (419)
T 3sso_A 265 RIRTIQ---GDQNDAEFLDRIARRYGPFDIVIDDGS-HIN----------------------AHVRTSFAALFPHVRPGG 318 (419)
T ss_dssp TEEEEE---CCTTCHHHHHHHHHHHCCEEEEEECSC-CCH----------------------HHHHHHHHHHGGGEEEEE
T ss_pred CcEEEE---ecccccchhhhhhcccCCccEEEECCc-ccc----------------------hhHHHHHHHHHHhcCCCe
Confidence 22 222 232222233 689999999865 652 245677888889999999
Q ss_pred eeEEEE
Q 045960 149 RMVLTL 154 (300)
Q Consensus 149 ~~vl~~ 154 (300)
++++.=
T Consensus 319 vlVi~D 324 (419)
T 3sso_A 319 LYVIED 324 (419)
T ss_dssp EEEEEC
T ss_pred EEEEEe
Confidence 999963
No 198
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=95.41 E-value=0.028 Score=53.93 Aligned_cols=120 Identities=18% Similarity=0.164 Sum_probs=67.0
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||+.|..|+.+.... +..+|+.+|.-.+=...+-+.+.. .+. ...+ +
T Consensus 249 ~VLDlgaG~G~~t~~la~~~---------------~~~~v~a~D~~~~~l~~~~~~~~~--------~g~--~~~~---~ 300 (429)
T 1sqg_A 249 HILDLCAAPGGKTTHILEVA---------------PEAQVVAVDIDEQRLSRVYDNLKR--------LGM--KATV---K 300 (429)
T ss_dssp EEEEESCTTCHHHHHHHHHC---------------TTCEEEEEESSTTTHHHHHHHHHH--------TTC--CCEE---E
T ss_pred eEEEECCCchHHHHHHHHHc---------------CCCEEEEECCCHHHHHHHHHHHHH--------cCC--CeEE---E
Confidence 79999999999998765421 125788888655433333222211 111 1112 2
Q ss_pred CCcccc--ccCCCCcccEEEec---cccccccCCCCCCC--CCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYT--RLFPHNFLDFVYSS---YALHWLSRMPKGQG--NESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~--~l~P~~sv~~~~Ss---~alHWLS~vP~~~~--n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-+.+.. ..+|.+++|.|++. +.+..+.+.|+... ++..+. ...+....+|+.-.+-|+|||+|+....
T Consensus 301 ~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~p~~~~~~~~~~~~-----~l~~~q~~~L~~a~~~LkpGG~lvystc 375 (429)
T 1sqg_A 301 QGDGRYPSQWCGEQQFDRILLDAPCSATGVIRRHPDIKWLRRDRDIP-----ELAQLQSEILDAIWPHLKTGGTLVYATC 375 (429)
T ss_dssp ECCTTCTHHHHTTCCEEEEEEECCCCCGGGTTTCTTHHHHCCTTHHH-----HHHHHHHHHHHHHGGGEEEEEEEEEEES
T ss_pred eCchhhchhhcccCCCCEEEEeCCCCcccccCCCcchhhcCCHHHHH-----HHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 223222 22567889999973 34445555443110 122221 1233346788888889999999998763
No 199
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=95.34 E-value=0.12 Score=46.50 Aligned_cols=101 Identities=11% Similarity=-0.054 Sum_probs=54.7
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..|+.+... + +. +|+..|+-.. . +......... ++-. +.+ ..+
T Consensus 128 ~VLDlgcG~G~~~~~la~~------------~---~~-~V~~vD~s~~-----~--~~~a~~n~~~-n~~~-~~v--~~~ 180 (278)
T 2frn_A 128 LVVDMFAGIGHLSLPIAVY------------G---KA-KVIAIEKDPY-----T--FKFLVENIHL-NKVE-DRM--SAY 180 (278)
T ss_dssp EEEETTCTTTTTHHHHHHH------------T---CC-EEEEECCCHH-----H--HHHHHHHHHH-TTCT-TTE--EEE
T ss_pred EEEEecccCCHHHHHHHHh------------C---CC-EEEEEECCHH-----H--HHHHHHHHHH-cCCC-ceE--EEE
Confidence 6999999999998866431 1 12 5777665211 0 0001111111 1111 112 113
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
-+....-+ +.+++|++++.. |.. ...+|..-.+-|+|||++++...+.
T Consensus 181 ~~D~~~~~-~~~~fD~Vi~~~--------p~~------------------~~~~l~~~~~~LkpgG~l~~~~~~~ 228 (278)
T 2frn_A 181 NMDNRDFP-GENIADRILMGY--------VVR------------------THEFIPKALSIAKDGAIIHYHNTVP 228 (278)
T ss_dssp CSCTTTCC-CCSCEEEEEECC--------CSS------------------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ECCHHHhc-ccCCccEEEECC--------chh------------------HHHHHHHHHHHCCCCeEEEEEEeec
Confidence 33443333 378899998842 211 1345555667899999999877654
No 200
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=95.34 E-value=0.084 Score=48.44 Aligned_cols=50 Identities=16% Similarity=0.207 Sum_probs=31.2
Q ss_pred CcccEEEeccccccccC-CCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 94 NFLDFVYSSYALHWLSR-MPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~-vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
+++|+|+|+.+.+|.-. .+.... . ...+...|+.-.+-|||||+|++...
T Consensus 122 ~~fD~Vvsn~~~~~~g~~~~d~~~-~-----------~~l~~~~l~~a~r~LkpGG~~v~~~~ 172 (290)
T 2xyq_A 122 NKWDLIISDMYDPRTKHVTKENDS-K-----------EGFFTYLCGFIKQKLALGGSIAVKIT 172 (290)
T ss_dssp SCEEEEEECCCCCC---CCSCCCC-C-----------CTHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CcccEEEEcCCccccccccccccc-h-----------HHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 78999999877665211 011000 0 11245677778889999999998654
No 201
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=95.30 E-value=0.073 Score=55.91 Aligned_cols=111 Identities=11% Similarity=0.039 Sum_probs=65.8
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhh-c--CCCCCceee
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTE-K--GHEFGSCFV 79 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~-~--~~~~~~~f~ 79 (300)
+|.|+||++|..++.+.. .+ +|..+|+.-|+-.. .| ......+... . .....+ +
T Consensus 724 rVLDVGCGTG~lai~LAr------------~g--~p~a~VtGVDIS~e---mL----e~AReRLa~~lnAkr~gl~n--V 780 (950)
T 3htx_A 724 TLVDFGCGSGSLLDSLLD------------YP--TSLQTIIGVDISPK---GL----ARAAKMLHVKLNKEACNVKS--A 780 (950)
T ss_dssp EEEEETCSSSHHHHHHTS------------SC--CCCCEEEEEESCHH---HH----HHHHHHHHHHTTTTCSSCSE--E
T ss_pred EEEEECCCCCHHHHHHHH------------hC--CCCCeEEEEECCHH---HH----HHHHHHhhhccchhhcCCCc--e
Confidence 799999999988775431 11 23357777775321 11 1111111100 0 001122 2
Q ss_pred eecCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeec
Q 045960 80 AASPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYN 157 (300)
Q Consensus 80 ~~vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~ 157 (300)
..+-|+...--++.+++|+|+++.++||+.. .+...||+.-.+-|+|| .+++..+.+
T Consensus 781 efiqGDa~dLp~~d~sFDlVV~~eVLeHL~d--------------------p~l~~~L~eI~RvLKPG-~LIISTPN~ 837 (950)
T 3htx_A 781 TLYDGSILEFDSRLHDVDIGTCLEVIEHMEE--------------------DQACEFGEKVLSLFHPK-LLIVSTPNY 837 (950)
T ss_dssp EEEESCTTSCCTTSCSCCEEEEESCGGGSCH--------------------HHHHHHHHHHHHTTCCS-EEEEEECBG
T ss_pred EEEECchHhCCcccCCeeEEEEeCchhhCCh--------------------HHHHHHHHHHHHHcCCC-EEEEEecCc
Confidence 2234555555567899999999999999543 12456788888999999 777776544
No 202
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=95.17 E-value=0.045 Score=49.07 Aligned_cols=27 Identities=15% Similarity=0.209 Sum_probs=21.8
Q ss_pred HHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 130 ESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 130 ~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
.++...+|+.-.+-|+|||+|+.....
T Consensus 187 ~~~~~~~l~~~~~~LkpgG~lv~stcs 213 (274)
T 3ajd_A 187 SLRQKELIDIGIDLLKKDGELVYSTCS 213 (274)
T ss_dssp GTCHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred HHHHHHHHHHHHHhCCCCCEEEEEECC
Confidence 345678899888999999999887643
No 203
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=95.13 E-value=0.052 Score=49.90 Aligned_cols=122 Identities=13% Similarity=-0.006 Sum_probs=60.5
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..|+.+.... .+.-+|+-+|.-..=-..+- ..... .+. .++ ..+
T Consensus 121 ~VLDlg~G~G~~t~~la~~~--------------~~~~~v~avD~s~~~l~~a~-------~~~~~-~g~--~~v--~~~ 174 (315)
T 1ixk_A 121 IVADMAAAPGGKTSYLAQLM--------------RNDGVIYAFDVDENRLRETR-------LNLSR-LGV--LNV--ILF 174 (315)
T ss_dssp EEEECCSSCSHHHHHHHHHT--------------TTCSEEEEECSCHHHHHHHH-------HHHHH-HTC--CSE--EEE
T ss_pred EEEEeCCCCCHHHHHHHHHh--------------CCCCEEEEEcCCHHHHHHHH-------HHHHH-hCC--CeE--EEE
Confidence 79999999999998655421 11246677664321111111 11111 111 122 122
Q ss_pred CCccccccCCCCcccEEEecc---ccccccCCCCCCC--CCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRLFPHNFLDFVYSSY---ALHWLSRMPKGQG--NESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~---alHWLS~vP~~~~--n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-+.+..-..+++++|.|++.. .+.-+.+.|+... ++..+. ...+....+|+.-++-|||||+|++...
T Consensus 175 ~~D~~~~~~~~~~fD~Il~d~Pcsg~g~~~~~p~~~~~~~~~~~~-----~~~~~q~~~L~~~~~~LkpGG~lv~stc 247 (315)
T 1ixk_A 175 HSSSLHIGELNVEFDKILLDAPCTGSGTIHKNPERKWNRTMDDIK-----FCQGLQMRLLEKGLEVLKPGGILVYSTC 247 (315)
T ss_dssp SSCGGGGGGGCCCEEEEEEECCTTSTTTCC--------CCHHHHH-----HHHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred ECChhhcccccccCCEEEEeCCCCCcccccCChhHhhcCCHHHHH-----HHHHHHHHHHHHHHHhCCCCCEEEEEeC
Confidence 233322112356899999742 1222223343211 122222 2234457888888899999999988653
No 204
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=95.12 E-value=0.087 Score=46.04 Aligned_cols=55 Identities=15% Similarity=0.155 Sum_probs=32.1
Q ss_pred cccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 86 FYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 86 Fy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+....++.+++|.++....=-|.... . ..+... ...+|+.-++-|+|||++++..
T Consensus 119 ~l~~~~~~~~~d~v~~~~p~p~~k~~----------~--~~~r~~--~~~~l~~~~~~LkpgG~l~~~t 173 (246)
T 2vdv_E 119 FLPNFFEKGQLSKMFFCFPDPHFKQR----------K--HKARII--TNTLLSEYAYVLKEGGVVYTIT 173 (246)
T ss_dssp CGGGTSCTTCEEEEEEESCCCC------------------CSSCC--CHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHHhccccccCEEEEECCCcccccc----------h--hHHhhc--cHHHHHHHHHHcCCCCEEEEEe
Confidence 34466888999999855433332110 0 000000 1467777888999999999854
No 205
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=95.09 E-value=0.046 Score=53.50 Aligned_cols=104 Identities=15% Similarity=0.185 Sum_probs=54.3
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
-+|.|+||++|..++.+. +. +..+|+.-|+.. - ..... ..... .+-. .++ ..
T Consensus 160 ~~VLDiGcGtG~la~~la--------~~--------~~~~V~gvD~s~--~---l~~A~---~~~~~-~gl~-~~v--~~ 211 (480)
T 3b3j_A 160 KIVLDVGCGSGILSFFAA--------QA--------GARKIYAVEAST--M---AQHAE---VLVKS-NNLT-DRI--VV 211 (480)
T ss_dssp CEEEEESCSTTHHHHHHH--------HT--------TCSEEEEEECHH--H---HHHHH---HHHHH-TTCT-TTE--EE
T ss_pred CEEEEecCcccHHHHHHH--------Hc--------CCCEEEEEEcHH--H---HHHHH---HHHHH-cCCC-CcE--EE
Confidence 379999999998665332 11 235788888631 1 11111 11111 1110 122 22
Q ss_pred cCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+.+.+..--+| .++|+++|+..++.+.. + +....|..-.+-|+|||+|++..
T Consensus 212 ~~~d~~~~~~~-~~fD~Ivs~~~~~~~~~--------e------------~~~~~l~~~~~~LkpgG~li~~~ 263 (480)
T 3b3j_A 212 IPGKVEEVSLP-EQVDIIISEPMGYMLFN--------E------------RMLESYLHAKKYLKPSGNMFPTI 263 (480)
T ss_dssp EESCTTTCCCS-SCEEEEECCCCHHHHTC--------H------------HHHHHHHHGGGGEEEEEEEESCE
T ss_pred EECchhhCccC-CCeEEEEEeCchHhcCc--------H------------HHHHHHHHHHHhcCCCCEEEEEe
Confidence 33444442234 58999999877443222 1 12223333347899999998654
No 206
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=94.97 E-value=0.058 Score=49.18 Aligned_cols=66 Identities=9% Similarity=-0.086 Sum_probs=35.4
Q ss_pred CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHH
Q 045960 92 PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMV 171 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~a 171 (300)
+++++|+|++...-+|... +.. -....|++.-++-|+|||+|++..... . ...+.+..+
T Consensus 160 ~~~~fD~Ii~d~~~~~~~~-~~~----------------l~~~~~l~~~~~~LkpgG~lv~~~~~~---~-~~~~~~~~~ 218 (296)
T 1inl_A 160 FKNEFDVIIIDSTDPTAGQ-GGH----------------LFTEEFYQACYDALKEDGVFSAETEDP---F-YDIGWFKLA 218 (296)
T ss_dssp CSSCEEEEEEEC---------------------------CCSHHHHHHHHHHEEEEEEEEEECCCT---T-TTHHHHHHH
T ss_pred CCCCceEEEEcCCCcccCc-hhh----------------hhHHHHHHHHHHhcCCCcEEEEEccCc---c-cCHHHHHHH
Confidence 3578999999766666432 100 012566777788899999999975211 0 111445555
Q ss_pred HHHHHHc
Q 045960 172 LKDMISE 178 (300)
Q Consensus 172 l~~mv~e 178 (300)
++.|.+.
T Consensus 219 ~~~l~~~ 225 (296)
T 1inl_A 219 YRRISKV 225 (296)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5555444
No 207
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=94.96 E-value=0.096 Score=45.78 Aligned_cols=18 Identities=22% Similarity=0.385 Sum_probs=15.6
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|.|+||++|..++.+..
T Consensus 73 ~VLeiG~G~G~~~~~la~ 90 (237)
T 3c3y_A 73 KTIEVGVFTGYSLLLTAL 90 (237)
T ss_dssp EEEEECCTTSHHHHHHHH
T ss_pred EEEEeCCCCCHHHHHHHH
Confidence 799999999999987654
No 208
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=94.86 E-value=0.14 Score=47.48 Aligned_cols=113 Identities=17% Similarity=0.072 Sum_probs=62.7
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|.||++|..++.+.... + |...|+..|.-. ..+ ......... .+- . .+.-+
T Consensus 206 ~vLD~gcGsG~~~ie~a~~~-----------~---~~~~v~g~Di~~---~~i----~~a~~n~~~-~g~--~--~i~~~ 259 (354)
T 3tma_A 206 RVLDPFTGSGTIALEAASTL-----------G---PTSPVYAGDLDE---KRL----GLAREAALA-SGL--S--WIRFL 259 (354)
T ss_dssp CEEESSCTTSHHHHHHHHHH-----------C---TTSCEEEEESCH---HHH----HHHHHHHHH-TTC--T--TCEEE
T ss_pred EEEeCCCCcCHHHHHHHHhh-----------C---CCceEEEEECCH---HHH----HHHHHHHHH-cCC--C--ceEEE
Confidence 68999999998877654432 0 235566666421 111 000111111 111 1 12223
Q ss_pred CCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-+.+..-..|..++|+++++--.+|... . .. +.......+++.-.+-|+|||++++...
T Consensus 260 ~~D~~~~~~~~~~~D~Ii~npPyg~r~~--~----~~--------~~~~~~~~~~~~~~~~LkpgG~l~i~t~ 318 (354)
T 3tma_A 260 RADARHLPRFFPEVDRILANPPHGLRLG--R----KE--------GLFHLYWDFLRGALALLPPGGRVALLTL 318 (354)
T ss_dssp ECCGGGGGGTCCCCSEEEECCCSCC----------CH--------HHHHHHHHHHHHHHHTSCTTCEEEEEES
T ss_pred eCChhhCccccCCCCEEEECCCCcCccC--C----cc--------cHHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 3455554456677899999876665221 0 11 2234457888888899999999998763
No 209
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=94.85 E-value=0.03 Score=50.61 Aligned_cols=45 Identities=16% Similarity=0.125 Sum_probs=30.0
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
++++|++++....||-. |..+ | -..|++.-.+-|+|||++++...
T Consensus 150 ~~~fD~Ii~d~~~~~~~--~~~l---------~-------~~~~l~~~~~~L~pgG~lv~~~~ 194 (281)
T 1mjf_A 150 NRGFDVIIADSTDPVGP--AKVL---------F-------SEEFYRYVYDALNNPGIYVTQAG 194 (281)
T ss_dssp CCCEEEEEEECCCCC-------T---------T-------SHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cCCeeEEEECCCCCCCc--chhh---------h-------HHHHHHHHHHhcCCCcEEEEEcC
Confidence 56799999987766611 1100 0 14567777788999999999853
No 210
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=94.58 E-value=0.14 Score=44.84 Aligned_cols=18 Identities=17% Similarity=0.128 Sum_probs=15.5
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|.|+||++|..|+.+.+
T Consensus 84 ~VLDiG~GtG~~t~~la~ 101 (236)
T 2bm8_A 84 TIVELGVYNGGSLAWFRD 101 (236)
T ss_dssp EEEEECCTTSHHHHHHHH
T ss_pred EEEEEeCCCCHHHHHHHH
Confidence 799999999999986554
No 211
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=94.52 E-value=0.031 Score=51.71 Aligned_cols=45 Identities=16% Similarity=0.193 Sum_probs=27.3
Q ss_pred CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 92 PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+++++|++++...-|| .|. ...|. ..|++.-.+-|+|||++++..
T Consensus 178 ~~~~fD~Ii~d~~~~~---~~~--------~~l~t-------~~~l~~~~~~LkpgG~lv~~~ 222 (314)
T 2b2c_A 178 HKNEFDVIITDSSDPV---GPA--------ESLFG-------QSYYELLRDALKEDGILSSQG 222 (314)
T ss_dssp CTTCEEEEEECCC-------------------------------HHHHHHHHEEEEEEEEEEC
T ss_pred cCCCceEEEEcCCCCC---Ccc--------hhhhH-------HHHHHHHHhhcCCCeEEEEEC
Confidence 5678999999776555 221 00010 567777788999999999876
No 212
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=94.48 E-value=0.071 Score=47.09 Aligned_cols=18 Identities=17% Similarity=0.281 Sum_probs=15.4
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|.|+||++|..++.+..
T Consensus 82 ~VLeiG~G~G~~~~~la~ 99 (247)
T 1sui_A 82 NTMEIGVYTGYSLLATAL 99 (247)
T ss_dssp EEEEECCGGGHHHHHHHH
T ss_pred EEEEeCCCcCHHHHHHHH
Confidence 799999999999986554
No 213
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=94.46 E-value=0.15 Score=49.11 Aligned_cols=122 Identities=11% Similarity=0.079 Sum_probs=61.4
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||+.|.-|+.+...+ + ..-+|+.+|.-..=-..+= ..... .+. .++-+ +
T Consensus 262 ~VLDlgaG~G~~t~~la~~~-----------~---~~~~v~a~D~s~~~l~~~~-------~~~~~-~g~--~~v~~--~ 315 (450)
T 2yxl_A 262 TVVDLAAAPGGKTTHLAELM-----------K---NKGKIYAFDVDKMRMKRLK-------DFVKR-MGI--KIVKP--L 315 (450)
T ss_dssp EEEESSCTTCHHHHHHHHHT-----------T---TCSEEEEECSCHHHHHHHH-------HHHHH-TTC--CSEEE--E
T ss_pred EEEEeCCCccHHHHHHHHHc-----------C---CCCEEEEEcCCHHHHHHHH-------HHHHH-cCC--CcEEE--E
Confidence 79999999999998765421 1 1246777775321111111 11111 111 22222 2
Q ss_pred CCcccc--ccCCCCcccEEEec---cccccccCCCCCCC--CCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYT--RLFPHNFLDFVYSS---YALHWLSRMPKGQG--NESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~--~l~P~~sv~~~~Ss---~alHWLS~vP~~~~--n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-+.+-. .-++++++|.|++. +.+.-+.+.|+... ++..+.. ....-..+|+.-++-|+|||+|+....
T Consensus 316 ~~D~~~~~~~~~~~~fD~Vl~D~Pcsg~g~~~~~pd~~~~~~~~~~~~-----l~~~q~~iL~~a~~~LkpGG~lvy~tc 390 (450)
T 2yxl_A 316 VKDARKAPEIIGEEVADKVLLDAPCTSSGTIGKNPELRWRLREDKINE-----MSQLQRELLESAARLVKPGGRLLYTTC 390 (450)
T ss_dssp CSCTTCCSSSSCSSCEEEEEEECCCCCGGGTTTSTTHHHHCCTTSHHH-----HHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred EcChhhcchhhccCCCCEEEEcCCCCCCeeeccChhhhhhCCHHHHHH-----HHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 222221 12566789999962 23333333342100 0122211 122235778888888999999987654
No 214
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=94.31 E-value=0.61 Score=43.69 Aligned_cols=28 Identities=11% Similarity=-0.020 Sum_probs=23.5
Q ss_pred hHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 128 QFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 128 q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
...+++..+|..-.+-|+|||.+++...
T Consensus 299 ~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 326 (382)
T 1wxx_A 299 RAYRAYKEVNLRAIKLLKEGGILATASC 326 (382)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 3467788999999999999999988764
No 215
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=94.19 E-value=0.32 Score=42.88 Aligned_cols=22 Identities=18% Similarity=0.244 Sum_probs=17.6
Q ss_pred HHHHHHHHHHhhccCceeEEEE
Q 045960 133 FSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 133 ~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
...+|..-.+-|++||++|++-
T Consensus 98 i~~Il~~~~~~L~~~~~lVlq~ 119 (225)
T 3kr9_A 98 IARILEEGLGKLANVERLILQP 119 (225)
T ss_dssp HHHHHHHTGGGCTTCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEC
Confidence 4667777778899999998854
No 216
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=94.10 E-value=0.077 Score=44.93 Aligned_cols=21 Identities=10% Similarity=0.034 Sum_probs=16.5
Q ss_pred HHHHHHHHHHhhccCceeEEE
Q 045960 133 FSTFLKFRSEELKSQGRMVLT 153 (300)
Q Consensus 133 ~~~fL~~Ra~EL~~GG~~vl~ 153 (300)
...+|+.-.+-|+|||++++.
T Consensus 139 ~~~~l~~~~~~LkpgG~lv~~ 159 (210)
T 3c3p_A 139 GADVLERMNRCLAKNALLIAV 159 (210)
T ss_dssp HHHHHHHHGGGEEEEEEEEEE
T ss_pred hHHHHHHHHHhcCCCeEEEEE
Confidence 456677777889999999874
No 217
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=94.08 E-value=0.069 Score=48.11 Aligned_cols=64 Identities=16% Similarity=-0.021 Sum_probs=38.0
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHHHHH
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPMLMVL 172 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~~al 172 (300)
++++|++++....+|.. |..+. -..|++.-.+-|+|||+|++.... +. ...+.+..++
T Consensus 146 ~~~fD~Ii~d~~~~~~~--~~~l~----------------~~~~~~~~~~~L~pgG~lv~~~~~-~~---~~~~~~~~~~ 203 (275)
T 1iy9_A 146 ENQYDVIMVDSTEPVGP--AVNLF----------------TKGFYAGIAKALKEDGIFVAQTDN-PW---FTPELITNVQ 203 (275)
T ss_dssp CSCEEEEEESCSSCCSC--CCCCS----------------TTHHHHHHHHHEEEEEEEEEECCC-TT---TCHHHHHHHH
T ss_pred CCCeeEEEECCCCCCCc--chhhh----------------HHHHHHHHHHhcCCCcEEEEEcCC-cc---ccHHHHHHHH
Confidence 57899999987777621 21111 134555566889999999988532 11 1114556666
Q ss_pred HHHHHc
Q 045960 173 KDMISE 178 (300)
Q Consensus 173 ~~mv~e 178 (300)
+.|.+-
T Consensus 204 ~~l~~~ 209 (275)
T 1iy9_A 204 RDVKEI 209 (275)
T ss_dssp HHHHTT
T ss_pred HHHHHh
Confidence 655443
No 218
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=94.06 E-value=0.047 Score=50.11 Aligned_cols=46 Identities=11% Similarity=0.099 Sum_probs=28.9
Q ss_pred CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 92 PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
+++++|+|++....|| .|.. .-....|++.-.+-|+|||++++...
T Consensus 165 ~~~~fD~Ii~d~~~~~---~~~~---------------~l~~~~~l~~~~~~LkpgG~lv~~~~ 210 (304)
T 2o07_A 165 NQDAFDVIITDSSDPM---GPAE---------------SLFKESYYQLMKTALKEDGVLCCQGE 210 (304)
T ss_dssp CSSCEEEEEEECC-----------------------------CHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCCceEEEECCCCCC---Ccch---------------hhhHHHHHHHHHhccCCCeEEEEecC
Confidence 4678999999877666 2210 00124567777889999999998764
No 219
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=94.04 E-value=0.07 Score=49.34 Aligned_cols=63 Identities=13% Similarity=-0.029 Sum_probs=38.4
Q ss_pred CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHH--HHHHHHHHHhhccCceeEEEEeecCCCCCCCchHHH
Q 045960 92 PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDF--STFLKFRSEELKSQGRMVLTLLYNDNFHATPGEPML 169 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~--~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~~~l~ 169 (300)
+++++|++++...-+| -|. .++ ..|++.-.+-|+|||++++.....- ...+.+.
T Consensus 186 ~~~~fDvIi~d~~~p~---~~~-----------------~~l~~~~~l~~~~~~LkpgG~lv~~~~~~~----~~~~~~~ 241 (321)
T 2pt6_A 186 VTNTYDVIIVDSSDPI---GPA-----------------ETLFNQNFYEKIYNALKPNGYCVAQCESLW----IHVGTIK 241 (321)
T ss_dssp CCSCEEEEEEECCCSS---SGG-----------------GGGSSHHHHHHHHHHEEEEEEEEEEECCTT----TCHHHHH
T ss_pred cCCCceEEEECCcCCC---Ccc-----------------hhhhHHHHHHHHHHhcCCCcEEEEEcCCcc----cCHHHHH
Confidence 3578999999765555 111 011 5677777889999999999863211 1114555
Q ss_pred HHHHHHHHc
Q 045960 170 MVLKDMISE 178 (300)
Q Consensus 170 ~al~~mv~e 178 (300)
..++.+.+.
T Consensus 242 ~~~~~l~~~ 250 (321)
T 2pt6_A 242 NMIGYAKKL 250 (321)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHHHHH
Confidence 555555443
No 220
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=94.02 E-value=0.061 Score=50.18 Aligned_cols=46 Identities=13% Similarity=0.040 Sum_probs=31.2
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+|++++|++++....+|- |. .. -....|++.-.+-|+|||+|++..
T Consensus 190 ~~~~~fDlIi~d~~~p~~---~~-----~~----------l~~~~~l~~~~~~LkpgG~lv~~~ 235 (334)
T 1xj5_A 190 AAEGSYDAVIVDSSDPIG---PA-----KE----------LFEKPFFQSVARALRPGGVVCTQA 235 (334)
T ss_dssp SCTTCEEEEEECCCCTTS---GG-----GG----------GGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccCCCccEEEECCCCccC---cc-----hh----------hhHHHHHHHHHHhcCCCcEEEEec
Confidence 356889999997765441 10 00 002567777788899999999874
No 221
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=93.97 E-value=0.083 Score=45.11 Aligned_cols=18 Identities=33% Similarity=0.344 Sum_probs=15.0
Q ss_pred eEEEeeCCCCCcccHHHH
Q 045960 2 IRFADLGCSSGPNALLPT 19 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~ 19 (300)
-+|.|+||++|..++.+.
T Consensus 71 ~~vLdiG~G~G~~~~~la 88 (229)
T 2avd_A 71 KKALDLGTFTGYSALALA 88 (229)
T ss_dssp CEEEEECCTTSHHHHHHH
T ss_pred CEEEEEcCCccHHHHHHH
Confidence 379999999999887654
No 222
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=93.79 E-value=0.31 Score=43.50 Aligned_cols=26 Identities=23% Similarity=0.217 Sum_probs=19.1
Q ss_pred HHHHHHHHHhhccCceeEEEEeecCC
Q 045960 134 STFLKFRSEELKSQGRMVLTLLYNDN 159 (300)
Q Consensus 134 ~~fL~~Ra~EL~~GG~~vl~~~g~~~ 159 (300)
..+|..-.+-|+|||++++.+....+
T Consensus 199 ~~~l~~~~~~LkpgG~l~~s~~~~~~ 224 (272)
T 3a27_A 199 HKFLDKTFEFLKDRGVIHYHETVAEK 224 (272)
T ss_dssp GGGHHHHHHHEEEEEEEEEEEEEEGG
T ss_pred HHHHHHHHHHcCCCCEEEEEEcCccc
Confidence 34555556789999999988876543
No 223
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=93.78 E-value=0.12 Score=46.70 Aligned_cols=20 Identities=10% Similarity=0.006 Sum_probs=16.4
Q ss_pred HHHHHHH-HhhccCceeEEEE
Q 045960 135 TFLKFRS-EELKSQGRMVLTL 154 (300)
Q Consensus 135 ~fL~~Ra-~EL~~GG~~vl~~ 154 (300)
.|++.-. +.|+|||++++.+
T Consensus 229 ~~~~~i~~~~l~pgG~l~~e~ 249 (284)
T 1nv8_A 229 DFYREFFGRYDTSGKIVLMEI 249 (284)
T ss_dssp HHHHHHHHHCCCTTCEEEEEC
T ss_pred HHHHHHHHhcCCCCCEEEEEE
Confidence 5666677 8899999999875
No 224
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=93.69 E-value=0.15 Score=49.88 Aligned_cols=122 Identities=11% Similarity=0.140 Sum_probs=63.6
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCce-eeee
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSC-FVAA 81 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~-f~~~ 81 (300)
+|.|+||++|.-|+.+.+.+ + +.-+|+-+|.-..=-..+=+.+ .. .+. .++ ++.+
T Consensus 120 ~VLDl~aGpG~kt~~lA~~~-----------~---~~g~V~avDis~~~l~~~~~n~-------~r-~g~--~nv~~~~~ 175 (479)
T 2frx_A 120 RVMDVAAAPGSKTTQISARM-----------N---NEGAILANEFSASRVKVLHANI-------SR-CGI--SNVALTHF 175 (479)
T ss_dssp EEEESSCTTSHHHHHHHHHT-----------T---TCSEEEEECSSHHHHHHHHHHH-------HH-HTC--CSEEEECC
T ss_pred EEEEeCCCCCHHHHHHHHhC-----------C---CCCEEEEEECCHHHHHHHHHHH-------HH-cCC--CcEEEEeC
Confidence 79999999999998765421 1 1246676665322111111111 11 111 222 2222
Q ss_pred cCCccccccCCCCcccEEEec---cccccccCCCCCCCC--CHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 82 SPGSFYTRLFPHNFLDFVYSS---YALHWLSRMPKGQGN--ESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss---~alHWLS~vP~~~~n--~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
=...+ .. .+++++|.|++. +.+.-+.+.|+.... +..+.+ ..+....+|+.-++-|||||+||....
T Consensus 176 D~~~~-~~-~~~~~fD~Il~D~PcSg~G~~~~~pd~~~~~~~~~~~~-----l~~~q~~iL~~a~~~LkpGG~LvysTc 247 (479)
T 2frx_A 176 DGRVF-GA-AVPEMFDAILLDAPCSGEGVVRKDPDALKNWSPESNQE-----IAATQRELIDSAFHALRPGGTLVYSTC 247 (479)
T ss_dssp CSTTH-HH-HSTTCEEEEEEECCCCCGGGGGTCTTSSSSCCHHHHHH-----HHHHHHHHHHHHHHHEEEEEEEEEEES
T ss_pred CHHHh-hh-hccccCCEEEECCCcCCcccccCCHHHHhhcCHhHHHH-----HHHHHHHHHHHHHHhcCCCCEEEEecc
Confidence 11111 00 135679999872 344444555544332 222222 233345678888889999999988654
No 225
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=93.65 E-value=0.04 Score=48.60 Aligned_cols=102 Identities=14% Similarity=0.192 Sum_probs=54.8
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|..|+.+...+ ++..+|+.-|.-..= +....+.... .+.. .++-+ +
T Consensus 63 ~VLDiG~G~G~~t~~la~~~--------------~~~~~v~~iD~~~~~-------~~~a~~~~~~-~g~~-~~i~~--~ 117 (242)
T 3r3h_A 63 KVLELGTFTGYSALAMSLAL--------------PDDGQVITCDINEGW-------TKHAHPYWRE-AKQE-HKIKL--R 117 (242)
T ss_dssp EEEEEESCCSHHHHHHHHTS--------------CTTCEEEEEECCCSS-------CCCSHHHHHH-TTCT-TTEEE--E
T ss_pred EEEEeeCCcCHHHHHHHHhC--------------CCCCEEEEEECCHHH-------HHHHHHHHHH-cCCC-CcEEE--E
Confidence 79999999999998654321 123566666653321 1111111111 1110 12211 2
Q ss_pred CCcccccc---CC---CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 83 PGSFYTRL---FP---HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 83 pgSFy~~l---~P---~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
-|....-+ .+ .+++|+||+... .. +...+|+.-.+-|+|||++++.-
T Consensus 118 ~gda~~~l~~~~~~~~~~~fD~V~~d~~---~~----------------------~~~~~l~~~~~~LkpGG~lv~d~ 170 (242)
T 3r3h_A 118 LGPALDTLHSLLNEGGEHQFDFIFIDAD---KT----------------------NYLNYYELALKLVTPKGLIAIDN 170 (242)
T ss_dssp ESCHHHHHHHHHHHHCSSCEEEEEEESC---GG----------------------GHHHHHHHHHHHEEEEEEEEEEC
T ss_pred EcCHHHHHHHHhhccCCCCEeEEEEcCC---hH----------------------HhHHHHHHHHHhcCCCeEEEEEC
Confidence 23333221 11 478999998643 11 23456666678899999999853
No 226
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=93.64 E-value=0.68 Score=43.59 Aligned_cols=27 Identities=15% Similarity=0.295 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 129 FESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 129 ~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
..+++..+++.-.+-|+|||.+++...
T Consensus 306 ~~~~~~~ll~~~~~~L~pgG~l~~~~~ 332 (385)
T 2b78_A 306 VSKDYHKLIRQGLEILSENGLIIASTN 332 (385)
T ss_dssp HHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEeC
Confidence 456678888888899999999988774
No 227
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=93.47 E-value=0.06 Score=48.67 Aligned_cols=42 Identities=19% Similarity=0.164 Sum_probs=31.0
Q ss_pred CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHH--HHHHHHHHHhhccCceeEEEE
Q 045960 93 HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDF--STFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 93 ~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~--~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
++++|++++....||. |. .++ ..|++.-.+-|+|||+|++..
T Consensus 149 ~~~fD~Ii~d~~~~~~---~~-----------------~~l~~~~~l~~~~~~L~pgG~lv~~~ 192 (283)
T 2i7c_A 149 TNTYDVIIVDSSDPIG---PA-----------------ETLFNQNFYEKIYNALKPNGYCVAQC 192 (283)
T ss_dssp CSCEEEEEEECCCTTT---GG-----------------GGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCceEEEEcCCCCCC---cc-----------------hhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence 5789999997766662 21 112 567777888999999999875
No 228
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=93.33 E-value=0.6 Score=41.32 Aligned_cols=22 Identities=18% Similarity=0.259 Sum_probs=17.0
Q ss_pred HHHHHHHHHHhhccCceeEEEE
Q 045960 133 FSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 133 ~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
...+|....+-|+++|+||++-
T Consensus 104 I~~IL~~~~~~l~~~~~lIlqp 125 (230)
T 3lec_A 104 IADILNNDIDKLQHVKTLVLQP 125 (230)
T ss_dssp HHHHHHHTGGGGTTCCEEEEEE
T ss_pred HHHHHHHHHHHhCcCCEEEEEC
Confidence 5667777777799999988765
No 229
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=93.15 E-value=0.14 Score=44.39 Aligned_cols=22 Identities=18% Similarity=0.380 Sum_probs=16.7
Q ss_pred HHHHHHHHHHhhccCceeEEEE
Q 045960 133 FSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 133 ~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
...+|+.-.+-|+|||++++.-
T Consensus 161 ~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 161 YPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp HHHHHHHHHHTEEEEEEEEEEC
T ss_pred HHHHHHHHHHHcCCCeEEEEeC
Confidence 3456666678899999999853
No 230
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=92.76 E-value=0.16 Score=49.57 Aligned_cols=121 Identities=12% Similarity=0.064 Sum_probs=61.7
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+||++|.-|+.+.+.+ + ..-+|+-+|+-..=-..+=+. ... .+. . +..+
T Consensus 104 ~VLDlgaGpG~kt~~LA~~~-----------~---~~g~V~AvDis~~~l~~a~~n-------~~r-~G~--~---v~~~ 156 (464)
T 3m6w_A 104 RVLDLAAAPGGKTTHLAARM-----------G---GKGLLLANEVDGKRVRGLLEN-------VER-WGA--P---LAVT 156 (464)
T ss_dssp EEEESSCTTCHHHHHHHHHT-----------T---TCSEEEEECSCHHHHHHHHHH-------HHH-HCC--C---CEEE
T ss_pred EEEEEcCCcCHHHHHHHHhC-----------C---CCCEEEEEECCHHHHHHHHHH-------HHH-cCC--e---EEEE
Confidence 79999999999998765421 1 124566666432111111111 111 121 1 1112
Q ss_pred CCcccccc-CCCCcccEEEec---cccccccCCCCCCC--CCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 83 PGSFYTRL-FPHNFLDFVYSS---YALHWLSRMPKGQG--NESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 83 pgSFy~~l-~P~~sv~~~~Ss---~alHWLS~vP~~~~--n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
-+....-. +.++++|.|++. +.+--+.+.|+... .+..+.+ ..+....+|+.-++-|||||+||....
T Consensus 157 ~~Da~~l~~~~~~~FD~Il~D~PcSg~G~~rr~pd~~~~~~~~~~~~-----l~~~Q~~iL~~a~~~LkpGG~LvysTC 230 (464)
T 3m6w_A 157 QAPPRALAEAFGTYFHRVLLDAPCSGEGMFRKDREAARHWGPSAPKR-----MAEVQKALLAQASRLLGPGGVLVYSTC 230 (464)
T ss_dssp CSCHHHHHHHHCSCEEEEEEECCCCCGGGTTTCTTSGGGCCTTHHHH-----HHHHHHHHHHHHHTTEEEEEEEEEEES
T ss_pred ECCHHHhhhhccccCCEEEECCCcCCccccccChHHhhhcCHHHHHH-----HHHHHHHHHHHHHHhcCCCcEEEEEec
Confidence 22221111 135678998852 22223334443322 1333322 234447788888899999999987653
No 231
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=92.01 E-value=0.76 Score=41.06 Aligned_cols=22 Identities=18% Similarity=0.283 Sum_probs=17.2
Q ss_pred HHHHHHHHHHhhccCceeEEEE
Q 045960 133 FSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 133 ~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
...+|....+-|+++|+||++=
T Consensus 104 I~~IL~~~~~~L~~~~~lIlq~ 125 (244)
T 3gnl_A 104 IRTILEEGAAKLAGVTKLILQP 125 (244)
T ss_dssp HHHHHHHTGGGGTTCCEEEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEEEc
Confidence 5667777777889999988774
No 232
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=91.88 E-value=1.5 Score=41.03 Aligned_cols=27 Identities=11% Similarity=-0.117 Sum_probs=23.0
Q ss_pred HHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 129 FESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 129 ~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
..+++..+|..-.+-|+|||.+++...
T Consensus 310 ~~~~~~~~l~~~~~~LkpgG~lv~~~~ 336 (396)
T 2as0_A 310 GLRAYFNVNFAGLNLVKDGGILVTCSC 336 (396)
T ss_dssp HHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEEEC
Confidence 457788999999999999999887764
No 233
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=91.64 E-value=0.76 Score=47.00 Aligned_cols=29 Identities=14% Similarity=0.201 Sum_probs=24.0
Q ss_pred hHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 128 QFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 128 q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
+..+|+..++..-.+-|+|||+|++....
T Consensus 631 ~~~~~~~~ll~~a~~~LkpgG~L~~s~~~ 659 (703)
T 3v97_A 631 DVQRDHLALMKDLKRLLRAGGTIMFSNNK 659 (703)
T ss_dssp BHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred HHHHHHHHHHHHHHHhcCCCcEEEEEECC
Confidence 34678889999889999999999977654
No 234
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=91.53 E-value=0.49 Score=42.62 Aligned_cols=20 Identities=25% Similarity=0.152 Sum_probs=16.5
Q ss_pred CCCcccEEEeccccccccCC
Q 045960 92 PHNFLDFVYSSYALHWLSRM 111 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~v 111 (300)
|+.+.|++.++=++|-|.+-
T Consensus 165 ~~~~~DvvLllk~lh~LE~q 184 (253)
T 3frh_A 165 PAEAGDLALIFKLLPLLERE 184 (253)
T ss_dssp CCCBCSEEEEESCHHHHHHH
T ss_pred CCCCcchHHHHHHHHHhhhh
Confidence 44489999999999998763
No 235
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=91.49 E-value=0.58 Score=43.76 Aligned_cols=64 Identities=17% Similarity=0.231 Sum_probs=37.0
Q ss_pred CCCCcccEEEeccccccccC---CCCCCCCCHHHHHHHHHhH------HHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 91 FPHNFLDFVYSSYALHWLSR---MPKGQGNESDVHKAFLNQF------ESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~---vP~~~~n~~~v~~ay~~q~------~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
.|..++|+|+++=-...... .+.. -+++..+.|...+ ...+..||+.-.+-|+|||++++.++.
T Consensus 94 ~~~~~fD~Ii~NPPy~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk~~G~~~~i~p~ 166 (421)
T 2ih2_A 94 EPGEAFDLILGNPPYGIVGEASKYPIH--VFKAVKDLYKKAFSTWKGKYNLYGAFLEKAVRLLKPGGVLVFVVPA 166 (421)
T ss_dssp CCSSCEEEEEECCCCCCBSCTTTCSBC--CCHHHHHHHHHHCTTCCTTCCHHHHHHHHHHHHEEEEEEEEEEEEG
T ss_pred CccCCCCEEEECcCccCcccccccccc--cCHHHHHHHHHhhhcccCCccHHHHHHHHHHHHhCCCCEEEEEECh
Confidence 35678999999632222111 1000 0234444443211 113557888888899999999998864
No 236
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=91.49 E-value=0.29 Score=44.75 Aligned_cols=67 Identities=10% Similarity=0.017 Sum_probs=37.1
Q ss_pred CCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEeecCCCCCCCc--hHHH
Q 045960 92 PHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLYNDNFHATPG--EPML 169 (300)
Q Consensus 92 P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g~~~~~~~~~--~~l~ 169 (300)
|....|++.++=++|-|.+-.+ ..-| .--++|+|||.+ +++.-+.-++..-+ +.-.
T Consensus 195 p~~~~DvaL~lkti~~Le~q~k----------------g~g~-----~ll~aL~~~~vv-VSfp~ksl~Grs~gm~~~Y~ 252 (281)
T 3lcv_B 195 LDEPADVTLLLKTLPCLETQQR----------------GSGW-----EVIDIVNSPNIV-VTFPTKSLGQRSKGMFQNYS 252 (281)
T ss_dssp CCSCCSEEEETTCHHHHHHHST----------------THHH-----HHHHHSSCSEEE-EEEECC-------CHHHHHH
T ss_pred CCCCcchHHHHHHHHHhhhhhh----------------HHHH-----HHHHHhCCCCEE-EeccchhhcCCCcchhhHHH
Confidence 6777999999999999865211 0112 245678888765 66654332222222 4445
Q ss_pred HHHHHHHH-cCC
Q 045960 170 MVLKDMIS-EGL 180 (300)
Q Consensus 170 ~al~~mv~-eG~ 180 (300)
..|...+. +|.
T Consensus 253 ~~~e~~~~~~g~ 264 (281)
T 3lcv_B 253 QSFESQARERSC 264 (281)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHhcCC
Confidence 55665444 454
No 237
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=91.07 E-value=0.26 Score=45.48 Aligned_cols=122 Identities=11% Similarity=0.019 Sum_probs=64.1
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHH-HhhcChhhHHHHhhhcCCCCCceeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNT-VFKSLPSFYERLRTEKGHEFGSCFVA 80 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~-Lf~~l~~~~~~~~~~~~~~~~~~f~~ 80 (300)
.+|.|.||++|.-++.+...+ ... . ....+|+..|+- +... +.+ ..... .+. . +.
T Consensus 132 ~~VlDp~cGsG~~l~~~~~~~----~~~----~--~~~~~v~GiDi~--~~~~~~a~------~n~~~-~g~--~---~~ 187 (344)
T 2f8l_A 132 VSILDPACGTANLLTTVINQL----ELK----G--DVDVHASGVDVD--DLLISLAL------VGADL-QRQ--K---MT 187 (344)
T ss_dssp EEEEETTCTTSHHHHHHHHHH----HTT----S--SCEEEEEEEESC--HHHHHHHH------HHHHH-HTC--C---CE
T ss_pred CEEEeCCCCccHHHHHHHHHH----HHh----c--CCCceEEEEECC--HHHHHHHH------HHHHh-CCC--C---ce
Confidence 489999999998877655443 111 0 124777777742 1111 110 00100 111 1 11
Q ss_pred ecCCccccccCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHh---HHHHH-HHHHHHHHHhhccCceeEEEEee
Q 045960 81 ASPGSFYTRLFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQ---FESDF-STFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 81 ~vpgSFy~~l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q---~~~D~-~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
.+-|..... .+...+|+++++--+++.+. ++..+.|... -..|. ..|+..-.+-|+|||++++.++.
T Consensus 188 i~~~D~l~~-~~~~~fD~Ii~NPPfg~~~~--------~~~~~~~~~~~~~g~~~~~~~~l~~~~~~Lk~gG~~~~v~p~ 258 (344)
T 2f8l_A 188 LLHQDGLAN-LLVDPVDVVISDLPVGYYPD--------DENAKTFELCREEGHSFAHFLFIEQGMRYTKPGGYLFFLVPD 258 (344)
T ss_dssp EEESCTTSC-CCCCCEEEEEEECCCSEESC--------HHHHTTSTTCCSSSCEEHHHHHHHHHHHTEEEEEEEEEEEEG
T ss_pred EEECCCCCc-cccCCccEEEECCCCCCcCc--------hhhhhhccccCCCCcchHHHHHHHHHHHHhCCCCEEEEEECc
Confidence 223333332 35678999999988877432 1110001000 00112 35777777889999999998853
No 238
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=90.96 E-value=1.2 Score=42.32 Aligned_cols=27 Identities=11% Similarity=0.172 Sum_probs=22.4
Q ss_pred hHHHHHHHHHHHHHHhhccCceeEEEE
Q 045960 128 QFESDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 128 q~~~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
...+|+..++..-.+-|+|||++++..
T Consensus 300 ~~~~~~~~ll~~a~~~LkpGG~Lv~~s 326 (393)
T 4dmg_A 300 AMKRHLVDLVREALRLLAEEGFLWLSS 326 (393)
T ss_dssp HHHHHHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCCCEEEEEE
Confidence 446788889999999999999998554
No 239
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=90.43 E-value=0.32 Score=47.33 Aligned_cols=26 Identities=15% Similarity=0.263 Sum_probs=20.3
Q ss_pred HHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 130 ESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 130 ~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
......+|..-++-|+|||+||....
T Consensus 210 ~~~Q~~iL~~a~~~LkpGG~LvYsTC 235 (456)
T 3m4x_A 210 QKRQQEILSSAIKMLKNKGQLIYSTC 235 (456)
T ss_dssp HHHHHHHHHHHHHTEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 34456888888899999999987653
No 240
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=87.55 E-value=0.25 Score=44.27 Aligned_cols=19 Identities=16% Similarity=0.099 Sum_probs=16.5
Q ss_pred HHHHHHHhhccCceeEEEE
Q 045960 136 FLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 136 fL~~Ra~EL~~GG~~vl~~ 154 (300)
|++.-.+-|+|||+|++..
T Consensus 153 ~~~~~~~~L~pgG~lv~~~ 171 (262)
T 2cmg_A 153 RIDGLKRMLKEDGVFISVA 171 (262)
T ss_dssp HHHHHHTTEEEEEEEEEEE
T ss_pred HHHHHHHhcCCCcEEEEEc
Confidence 7777888999999999874
No 241
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=85.37 E-value=3.1 Score=39.68 Aligned_cols=22 Identities=32% Similarity=0.377 Sum_probs=18.6
Q ss_pred HHHHHHHHHhhccCceeEEEEe
Q 045960 134 STFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 134 ~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
..||+.-.+-|+|||++++.++
T Consensus 287 ~~fl~~~~~~Lk~gG~~a~V~p 308 (445)
T 2okc_A 287 LNFLQHMMLMLKTGGRAAVVLP 308 (445)
T ss_dssp HHHHHHHHHHEEEEEEEEEEEE
T ss_pred HHHHHHHHHHhccCCEEEEEEC
Confidence 4677777788999999999885
No 242
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=85.21 E-value=3.9 Score=40.51 Aligned_cols=130 Identities=19% Similarity=0.247 Sum_probs=63.3
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
.+|.|.+|++|.-.+.+...+. .....+++..|+-..=.... .+. +.. .+....+ .-..
T Consensus 223 ~~VlDPaCGSG~fLi~a~~~l~------------~~~~~~i~G~Eid~~~~~lA--~~N-----l~l-~gi~~~~-~~I~ 281 (542)
T 3lkd_A 223 FTLYDATMGSGSLLLNAKRYSR------------QPQTVVYFGQELNTSTYNLA--RMN-----MIL-HGVPIEN-QFLH 281 (542)
T ss_dssp CEEEETTCTTSTTGGGHHHHCS------------CTTTCEEEEEESCHHHHHHH--HHH-----HHH-TTCCGGG-EEEE
T ss_pred CEEeecccchhHHHHHHHHHHH------------hccCceEEEEECcHHHHHHH--HHH-----HHH-cCCCcCc-cceE
Confidence 4899999999988776554321 11246777776421111100 000 000 0100011 1111
Q ss_pred cCCcccc--ccCCCCcccEEEec--cccccccCCCCCCCCCHHHHHHH---HHhHHHHHHHHHHHHHHhhc-cCceeEEE
Q 045960 82 SPGSFYT--RLFPHNFLDFVYSS--YALHWLSRMPKGQGNESDVHKAF---LNQFESDFSTFLKFRSEELK-SQGRMVLT 153 (300)
Q Consensus 82 vpgSFy~--~l~P~~sv~~~~Ss--~alHWLS~vP~~~~n~~~v~~ay---~~q~~~D~~~fL~~Ra~EL~-~GG~~vl~ 153 (300)
.+-++.. ..++...+|+|+++ |...|-..- .+.+.+.. +.| ......|+ .|+..-.+-|+ +||++.+.
T Consensus 282 ~gDtL~~d~p~~~~~~fD~IvaNPPf~~~~~~~~--~~~~d~rf-~~~G~~~~~s~~~~-~Fl~~~l~~Lk~~gGr~a~V 357 (542)
T 3lkd_A 282 NADTLDEDWPTQEPTNFDGVLMNPPYSAKWSASS--GFMDDPRF-SPFGKLAPKSKADF-AFLLHGYYHLKQDNGVMAIV 357 (542)
T ss_dssp ESCTTTSCSCCSSCCCBSEEEECCCTTCCCCCCG--GGGGSTTT-GGGSSCCCTTCCHH-HHHHHHHHTBCTTTCEEEEE
T ss_pred ecceecccccccccccccEEEecCCcCCccccch--hhhhhhhh-hhhhhcCCCchhhH-HHHHHHHHHhCCCceeEEEE
Confidence 2233333 23667889999998 556662110 00000000 000 00111233 58888888999 99999998
Q ss_pred Eee
Q 045960 154 LLY 156 (300)
Q Consensus 154 ~~g 156 (300)
++.
T Consensus 358 lP~ 360 (542)
T 3lkd_A 358 LPH 360 (542)
T ss_dssp EET
T ss_pred ecc
Confidence 863
No 243
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=84.42 E-value=6.6 Score=36.39 Aligned_cols=101 Identities=9% Similarity=-0.008 Sum_probs=58.1
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|+| ++|..++.+.. . + |..+|+.-|+-. . .+......... .+- .+ +..+
T Consensus 175 ~VLDlG-G~G~~~~~la~--------~----~---~~~~v~~vDi~~---~----~l~~a~~~~~~-~g~--~~--v~~~ 226 (373)
T 2qm3_A 175 DIFVLG-DDDLTSIALML--------S----G---LPKRIAVLDIDE---R----LTKFIEKAANE-IGY--ED--IEIF 226 (373)
T ss_dssp EEEEES-CTTCHHHHHHH--------H----T---CCSEEEEECSCH---H----HHHHHHHHHHH-HTC--CC--EEEE
T ss_pred EEEEEC-CCCHHHHHHHH--------h----C---CCCEEEEEECCH---H----HHHHHHHHHHH-cCC--CC--EEEE
Confidence 799999 99998875432 1 1 235677777521 0 11111111111 121 12 3334
Q ss_pred CCccccccCC---CCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCcee-EEEEe
Q 045960 83 PGSFYTRLFP---HNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRM-VLTLL 155 (300)
Q Consensus 83 pgSFy~~l~P---~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~-vl~~~ 155 (300)
.|.+... +| ++++|+|+++.-+|+. +...||+.-.+-|+|||++ ++.+.
T Consensus 227 ~~D~~~~-l~~~~~~~fD~Vi~~~p~~~~-----------------------~~~~~l~~~~~~LkpgG~~~~~~~~ 279 (373)
T 2qm3_A 227 TFDLRKP-LPDYALHKFDTFITDPPETLE-----------------------AIRAFVGRGIATLKGPRCAGYFGIT 279 (373)
T ss_dssp CCCTTSC-CCTTTSSCBSEEEECCCSSHH-----------------------HHHHHHHHHHHTBCSTTCEEEEEEC
T ss_pred EChhhhh-chhhccCCccEEEECCCCchH-----------------------HHHHHHHHHHHHcccCCeEEEEEEe
Confidence 5555543 33 4689999998665541 1378888888999999965 55543
No 244
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=83.79 E-value=1.4 Score=39.32 Aligned_cols=50 Identities=18% Similarity=0.224 Sum_probs=37.4
Q ss_pred EEEeeCCCCCcccHHHHH------------HHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHh
Q 045960 3 RFADLGCSSGPNALLPTW------------EAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVF 56 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~------------~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf 56 (300)
+|.|+||++|.-|..+.. ..++.+++.... .+.++++..|...-||..++
T Consensus 32 ~VLEIG~G~G~lt~~La~~~~~V~avEid~~~~~~~~~~~~~----~~~v~~i~~D~~~~~~~~~~ 93 (255)
T 3tqs_A 32 TLVEIGPGRGALTDYLLTECDNLALVEIDRDLVAFLQKKYNQ----QKNITIYQNDALQFDFSSVK 93 (255)
T ss_dssp EEEEECCTTTTTHHHHTTTSSEEEEEECCHHHHHHHHHHHTT----CTTEEEEESCTTTCCGGGSC
T ss_pred EEEEEcccccHHHHHHHHhCCEEEEEECCHHHHHHHHHHHhh----CCCcEEEEcchHhCCHHHhc
Confidence 699999999999998864 466666665421 34689999998887776543
No 245
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=83.36 E-value=2.7 Score=38.62 Aligned_cols=24 Identities=13% Similarity=0.180 Sum_probs=17.4
Q ss_pred HHHHHHHHhhccCceeEEEEeecC
Q 045960 135 TFLKFRSEELKSQGRMVLTLLYND 158 (300)
Q Consensus 135 ~fL~~Ra~EL~~GG~~vl~~~g~~ 158 (300)
.+|..-.+-|+|||.+++......
T Consensus 272 ~~l~~~~~~L~~gG~l~~~~~~~~ 295 (336)
T 2yx1_A 272 KFIDKALDIVEEGGVIHYYTIGKD 295 (336)
T ss_dssp GGHHHHHHHEEEEEEEEEEEEESS
T ss_pred HHHHHHHHHcCCCCEEEEEEeecC
Confidence 455556677899999988766554
No 246
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=77.77 E-value=3.3 Score=40.97 Aligned_cols=137 Identities=15% Similarity=0.165 Sum_probs=65.9
Q ss_pred EEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeeec
Q 045960 3 RFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAAS 82 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~v 82 (300)
+|.|.+|++|.--+.+...+.+.-.............++++..|+- ..--.+-. -.+... +-. .+ +-...
T Consensus 247 ~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid-----~~~~~lA~--~Nl~l~-gi~-~~-i~i~~ 316 (544)
T 3khk_A 247 RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESN-----PTTWKLAA--MNMVIR-GID-FN-FGKKN 316 (544)
T ss_dssp EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCC-----HHHHHHHH--HHHHHT-TCC-CB-CCSSS
T ss_pred eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCC-----HHHHHHHH--HHHHHh-CCC-cc-cceec
Confidence 7999999999766555544433221110000000013677776642 11111110 001010 111 11 11124
Q ss_pred CCccccccCCCCcccEEEec--ccc-ccccCCCCCCCCCHHHHHHHH----------HhHHHHHHHHHHHHHHhhccCce
Q 045960 83 PGSFYTRLFPHNFLDFVYSS--YAL-HWLSRMPKGQGNESDVHKAFL----------NQFESDFSTFLKFRSEELKSQGR 149 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss--~al-HWLS~vP~~~~n~~~v~~ay~----------~q~~~D~~~fL~~Ra~EL~~GG~ 149 (300)
+-++....++...+|+|+++ |.. .|-... +.+.+.. .|. .....|+ .||..-.+-|+|||+
T Consensus 317 gDtL~~~~~~~~~fD~Iv~NPPf~~~~~~~~~---~~~d~r~--~~g~~~~~~~~~~~~~~~~~-~Fl~~~l~~Lk~gGr 390 (544)
T 3khk_A 317 ADSFLDDQHPDLRADFVMTNPPFNMKDWWHEK---LADDPRW--TINTNGEKRILTPPTGNANF-AWMLHMLYHLAPTGS 390 (544)
T ss_dssp CCTTTSCSCTTCCEEEEEECCCSSCCSCCCGG---GTTCGGG--EECCC--CEECCCCTTCTHH-HHHHHHHHTEEEEEE
T ss_pred cchhcCcccccccccEEEECCCcCCccccchh---hhhhhhh--hcCcccccccccCCCcchhH-HHHHHHHHHhccCce
Confidence 45566667788899999996 433 364321 0000000 000 0001122 588888899999999
Q ss_pred eEEEEe
Q 045960 150 MVLTLL 155 (300)
Q Consensus 150 ~vl~~~ 155 (300)
+.+.++
T Consensus 391 ~aiVlP 396 (544)
T 3khk_A 391 MALLLA 396 (544)
T ss_dssp EEEEEE
T ss_pred EEEEec
Confidence 999885
No 247
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=76.85 E-value=10 Score=34.86 Aligned_cols=48 Identities=15% Similarity=0.086 Sum_probs=31.9
Q ss_pred CCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHH-HHHHHHHHHHHHhhccC-ceeEEEEe
Q 045960 91 FPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFE-SDFSTFLKFRSEELKSQ-GRMVLTLL 155 (300)
Q Consensus 91 ~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~-~D~~~fL~~Ra~EL~~G-G~~vl~~~ 155 (300)
++...+|+|.|-.|-+ |-.+ .+ +|+. .++ |..=.+=|+|| |.||+-++
T Consensus 143 l~~~~~DlVlsD~APn--sG~~-------~~-----D~~rs~~L---L~~A~~~LkpG~G~FV~KvF 192 (300)
T 3eld_A 143 MPTEPSDTLLCDIGES--SSNP-------LV-----ERDRTMKV---LENFERWKHVNTENFCVKVL 192 (300)
T ss_dssp SCCCCCSEEEECCCCC--CSSH-------HH-----HHHHHHHH---HHHHHHHCCTTCCEEEEEES
T ss_pred cCCCCcCEEeecCcCC--CCCH-------HH-----HHHHHHHH---HHHHHHHhcCCCCcEEEEec
Confidence 5677899999988776 3322 22 2221 122 66666779999 99999875
No 248
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=72.77 E-value=4.2 Score=36.57 Aligned_cols=48 Identities=19% Similarity=0.191 Sum_probs=33.7
Q ss_pred EEEeeCCCCCcccHHHHHHH----------------HHHHHHHHHhcCCCCCceeEEecCCCCCchHHHh
Q 045960 3 RFADLGCSSGPNALLPTWEA----------------IDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVF 56 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~i----------------i~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf 56 (300)
+|.|+||++|.-|..+.... ++.+++.. .+.++++..|.-.-||..++
T Consensus 45 ~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~------~~~v~~i~~D~~~~~~~~~~ 108 (279)
T 3uzu_A 45 RMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF------GELLELHAGDALTFDFGSIA 108 (279)
T ss_dssp EEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH------GGGEEEEESCGGGCCGGGGS
T ss_pred EEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc------CCCcEEEECChhcCChhHhc
Confidence 79999999999999887643 33333321 23588888888777776654
No 249
>1jyo_E Protein tyrosine phosphatase SPTP; bacterial pathogenesis, infectious disease, virulence factor, type III secretion, chaperone, unfolded; 1.90A {Salmonella typhimurium} SCOP: d.184.1.2
Probab=71.44 E-value=1.2 Score=34.66 Aligned_cols=44 Identities=34% Similarity=0.398 Sum_probs=32.0
Q ss_pred EEeccccccccCCCCCCCCCHHHHHHHHHhH---HHHHHHHHHHHHHh
Q 045960 99 VYSSYALHWLSRMPKGQGNESDVHKAFLNQF---ESDFSTFLKFRSEE 143 (300)
Q Consensus 99 ~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~---~~D~~~fL~~Ra~E 143 (300)
.|++--|+||+++| -+.|..+|.+.-..+. .+-+..||++-++|
T Consensus 10 ~f~~kvlt~L~~~P-LLkN~~AVqk~~e~~~~~N~qtL~vFL~ALa~~ 56 (105)
T 1jyo_E 10 KFSSKVLTWLGKMP-LFKNTEVVQKHTENIRVQDQKILQTFLHALTEK 56 (105)
T ss_dssp CBTTBCEEEEECCC-CTTCHHHHHHHHHHSCCSCHHHHHHHHHHHHHT
T ss_pred hHHHHHHHHHHhCc-cccchHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46667789999999 4566777776554443 45578899988876
No 250
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=71.08 E-value=13 Score=34.94 Aligned_cols=18 Identities=28% Similarity=0.475 Sum_probs=14.6
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|+|.+|++|.-.+.+..
T Consensus 197 ~llDp~CGSGt~lIEAa~ 214 (384)
T 3ldg_A 197 PFVDPTCGSGTFCIEAAM 214 (384)
T ss_dssp CEEETTCTTSHHHHHHHH
T ss_pred eEEEeCCcCCHHHHHHHH
Confidence 589999999987776554
No 251
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=69.18 E-value=8.9 Score=36.16 Aligned_cols=18 Identities=28% Similarity=0.399 Sum_probs=14.5
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|.|.||++|.-.+.+..
T Consensus 204 ~vlDp~CGSGt~~ieaa~ 221 (393)
T 3k0b_A 204 PFYDPVCGSGTIPIEAAL 221 (393)
T ss_dssp CEEETTCTTSHHHHHHHH
T ss_pred eEEEcCCCCCHHHHHHHH
Confidence 589999999987766544
No 252
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=69.16 E-value=2.9 Score=37.62 Aligned_cols=45 Identities=9% Similarity=-0.033 Sum_probs=29.2
Q ss_pred EEEeeCCCCCcccHHHHHH------------HHHHHHHHHHhcCCCCCceeEEecCCCCCch
Q 045960 3 RFADLGCSSGPNALLPTWE------------AIDSLDKICHRLNRKPPVLHSFLNDLPRSDF 52 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~------------ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDF 52 (300)
+|.|+||++|.-|..+... .++.+++.. . ...++++..|.-.-||
T Consensus 49 ~VLEIG~G~G~lt~~L~~~~~~V~avEid~~~~~~l~~~~---~--~~~v~vi~~D~l~~~~ 105 (271)
T 3fut_A 49 PVFEVGPGLGALTRALLEAGAEVTAIEKDLRLRPVLEETL---S--GLPVRLVFQDALLYPW 105 (271)
T ss_dssp CEEEECCTTSHHHHHHHHTTCCEEEEESCGGGHHHHHHHT---T--TSSEEEEESCGGGSCG
T ss_pred eEEEEeCchHHHHHHHHHcCCEEEEEECCHHHHHHHHHhc---C--CCCEEEEECChhhCCh
Confidence 6899999999999887763 344444432 1 1247777777544444
No 253
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=67.49 E-value=2.1 Score=35.45 Aligned_cols=25 Identities=16% Similarity=0.155 Sum_probs=18.1
Q ss_pred CCccccccCCCCcccEEEeccccccccC
Q 045960 83 PGSFYTRLFPHNFLDFVYSSYALHWLSR 110 (300)
Q Consensus 83 pgSFy~~l~P~~sv~~~~Ss~alHWLS~ 110 (300)
-+.+.. +| +++|+++++-.+|+.++
T Consensus 103 ~~d~~~--~~-~~~D~v~~~~p~~~~~~ 127 (207)
T 1wy7_A 103 IGDVSE--FN-SRVDIVIMNPPFGSQRK 127 (207)
T ss_dssp ESCGGG--CC-CCCSEEEECCCCSSSST
T ss_pred ECchHH--cC-CCCCEEEEcCCCccccC
Confidence 344444 34 48999999999999765
No 254
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=67.12 E-value=2.2 Score=35.30 Aligned_cols=17 Identities=6% Similarity=-0.119 Sum_probs=11.4
Q ss_pred CcccEEEeccccccccC
Q 045960 94 NFLDFVYSSYALHWLSR 110 (300)
Q Consensus 94 ~sv~~~~Ss~alHWLS~ 110 (300)
+++|+++++-.+||+++
T Consensus 109 ~~~D~v~~~~p~~~~~~ 125 (200)
T 1ne2_A 109 GKYDTWIMNPPFGSVVK 125 (200)
T ss_dssp CCEEEEEECCCC-----
T ss_pred CCeeEEEECCCchhccC
Confidence 78999999999999764
No 255
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=66.65 E-value=3.2 Score=35.93 Aligned_cols=18 Identities=11% Similarity=0.082 Sum_probs=16.0
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|.|+||++|..|..+..
T Consensus 32 ~VLDiG~G~G~~~~~l~~ 49 (245)
T 1yub_A 32 TVYEIGTGKGHLTTKLAK 49 (245)
T ss_dssp EEEECSCCCSSCSHHHHH
T ss_pred EEEEEeCCCCHHHHHHHH
Confidence 799999999999997764
No 256
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=65.59 E-value=8.5 Score=34.29 Aligned_cols=18 Identities=11% Similarity=0.053 Sum_probs=15.9
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|.|+||++|..|..+..
T Consensus 31 ~VLDiG~G~G~lt~~L~~ 48 (285)
T 1zq9_A 31 VVLEVGPGTGNMTVKLLE 48 (285)
T ss_dssp EEEEECCTTSTTHHHHHH
T ss_pred EEEEEcCcccHHHHHHHh
Confidence 699999999999987764
No 257
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=63.80 E-value=2.8 Score=36.54 Aligned_cols=18 Identities=17% Similarity=0.204 Sum_probs=15.7
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|.|+||++|..|..+.+
T Consensus 33 ~VLDiG~G~G~lt~~l~~ 50 (244)
T 1qam_A 33 NIFEIGSGKGHFTLELVQ 50 (244)
T ss_dssp EEEEECCTTSHHHHHHHH
T ss_pred EEEEEeCCchHHHHHHHH
Confidence 699999999999987664
No 258
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=63.13 E-value=5.1 Score=35.37 Aligned_cols=48 Identities=13% Similarity=0.081 Sum_probs=30.0
Q ss_pred EEEeeCCCCCcccHHHHHHH--------------HHHHHHHHHhcCCCCCceeEEecCCCCCchHHHh
Q 045960 3 RFADLGCSSGPNALLPTWEA--------------IDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVF 56 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~i--------------i~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf 56 (300)
+|.|+||++|..|. +... ++.+++.. ...+.++++..|.-.-||..+|
T Consensus 24 ~VLEIG~G~G~lt~--l~~~~~~~v~avEid~~~~~~a~~~~----~~~~~v~~i~~D~~~~~~~~~~ 85 (252)
T 1qyr_A 24 AMVEIGPGLAALTE--PVGERLDQLTVIELDRDLAARLQTHP----FLGPKLTIYQQDAMTFNFGELA 85 (252)
T ss_dssp CEEEECCTTTTTHH--HHHTTCSCEEEECCCHHHHHHHHTCT----TTGGGEEEECSCGGGCCHHHHH
T ss_pred EEEEECCCCcHHHH--hhhCCCCeEEEEECCHHHHHHHHHHh----ccCCceEEEECchhhCCHHHhh
Confidence 68999999999998 3321 11111111 1123588888887777776654
No 259
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=60.99 E-value=9.3 Score=34.34 Aligned_cols=17 Identities=18% Similarity=0.421 Sum_probs=15.0
Q ss_pred EEEeeCCCCCcccHHHH
Q 045960 3 RFADLGCSSGPNALLPT 19 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~ 19 (300)
+|.|+||++|..|..+.
T Consensus 45 ~VLDiG~G~G~lt~~La 61 (299)
T 2h1r_A 45 IVLEIGCGTGNLTVKLL 61 (299)
T ss_dssp EEEEECCTTSTTHHHHT
T ss_pred EEEEEcCcCcHHHHHHH
Confidence 69999999999998654
No 260
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=59.71 E-value=8.7 Score=34.87 Aligned_cols=18 Identities=11% Similarity=-0.019 Sum_probs=16.0
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|.|+||++|..|..+..
T Consensus 53 ~VLEIG~G~G~lT~~La~ 70 (295)
T 3gru_A 53 VVLEIGLGKGILTEELAK 70 (295)
T ss_dssp EEEEECCTTSHHHHHHHH
T ss_pred EEEEECCCchHHHHHHHh
Confidence 699999999999987765
No 261
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=56.14 E-value=4 Score=35.89 Aligned_cols=15 Identities=20% Similarity=0.293 Sum_probs=12.5
Q ss_pred eEEEeeCCCCCcccH
Q 045960 2 IRFADLGCSSGPNAL 16 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl 16 (300)
-+|.|+||++|..++
T Consensus 73 ~~vLDiGcG~G~~~~ 87 (289)
T 2g72_A 73 RTLIDIGSGPTVYQL 87 (289)
T ss_dssp SEEEEETCTTCCGGG
T ss_pred CeEEEECCCcChHHH
Confidence 379999999999554
No 262
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=55.87 E-value=2.8 Score=37.02 Aligned_cols=19 Identities=11% Similarity=0.144 Sum_probs=16.1
Q ss_pred EEEeeCCCCCcccHHHHHH
Q 045960 3 RFADLGCSSGPNALLPTWE 21 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ 21 (300)
+|.|+||++|..|..+...
T Consensus 34 ~VLDiG~G~G~lt~~L~~~ 52 (249)
T 3ftd_A 34 TVVEVGGGTGNLTKVLLQH 52 (249)
T ss_dssp EEEEEESCHHHHHHHHTTS
T ss_pred EEEEEcCchHHHHHHHHHc
Confidence 6999999999998877653
No 263
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=55.09 E-value=48 Score=34.73 Aligned_cols=23 Identities=13% Similarity=0.151 Sum_probs=20.0
Q ss_pred HHHHHHHHHHhhccCceeEEEEe
Q 045960 133 FSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 133 ~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
...|+..-.+-|++||++.+.++
T Consensus 444 y~aFIe~Al~lLKpGGrLAfIlP 466 (878)
T 3s1s_A 444 EALFLELVTELVQDGTVISAIMP 466 (878)
T ss_dssp HHHHHHHHHHHSCTTCEEEEEEE
T ss_pred HHHHHHHHHHhcCCCcEEEEEEC
Confidence 55688888889999999999986
No 264
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=50.28 E-value=8.4 Score=34.73 Aligned_cols=17 Identities=18% Similarity=0.055 Sum_probs=15.0
Q ss_pred EEEeeCCCCCcccHHHH
Q 045960 3 RFADLGCSSGPNALLPT 19 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~ 19 (300)
+|+|+||++|+.|+.+.
T Consensus 128 ~VlD~~aG~G~~~i~~a 144 (278)
T 3k6r_A 128 LVVDMFAGIGHLSLPIA 144 (278)
T ss_dssp EEEETTCTTTTTTHHHH
T ss_pred EEEEecCcCcHHHHHHH
Confidence 69999999999998664
No 265
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=49.72 E-value=6.3 Score=38.86 Aligned_cols=19 Identities=32% Similarity=0.488 Sum_probs=16.0
Q ss_pred eEEEeeCCCCCcccHHHHH
Q 045960 2 IRFADLGCSSGPNALLPTW 20 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~ 20 (300)
++|.|+||+.|..|..+..
T Consensus 68 ~~vLDvGCG~G~~~~~la~ 86 (569)
T 4azs_A 68 LNVLDLGCAQGFFSLSLAS 86 (569)
T ss_dssp CEEEEETCTTSHHHHHHHH
T ss_pred CeEEEECCCCcHHHHHHHh
Confidence 6899999999998876653
No 266
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=48.10 E-value=6.7 Score=35.67 Aligned_cols=49 Identities=10% Similarity=-0.013 Sum_probs=33.1
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHH-HHHHHHHHHHHHhhccC-ceeEEEEe
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFE-SDFSTFLKFRSEELKSQ-GRMVLTLL 155 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~-~D~~~fL~~Ra~EL~~G-G~~vl~~~ 155 (300)
-++.+.+|+|.|..|.| |-.+ +.+++. -++ |+.-.+-|+|| |.||+-++
T Consensus 135 ~l~~~~~DlVlsD~apn--sG~~------------~~D~~rs~~L---L~~a~~~LkpG~G~FV~KVf 185 (277)
T 3evf_A 135 RLEPVKCDTLLCDIGES--SSSS------------VTEGERTVRV---LDTVEKWLACGVDNFCVKVL 185 (277)
T ss_dssp TSCCCCCSEEEECCCCC--CSCH------------HHHHHHHHHH---HHHHHHHHTTCCSEEEEEES
T ss_pred hcCCCCccEEEecCccC--cCch------------HHHHHHHHHH---HHHHHHHhCCCCCeEEEEec
Confidence 46788999999999888 3311 112221 122 66666789999 99998764
No 267
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=47.67 E-value=8 Score=34.33 Aligned_cols=22 Identities=23% Similarity=0.058 Sum_probs=19.1
Q ss_pred eEEEeeCCCCCcccHHHHHHHH
Q 045960 2 IRFADLGCSSGPNALLPTWEAI 23 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii 23 (300)
++|+|+||++|.|++..+....
T Consensus 62 ~~ILEiGfGtG~n~l~~~~~~~ 83 (257)
T 2qy6_A 62 FVVAESGFGTGLNFLTLWQAFD 83 (257)
T ss_dssp EEEEESCCTTSHHHHHHHHHHH
T ss_pred CEEEEECCChHHHHHHHHHHHH
Confidence 6899999999999998877553
No 268
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=46.54 E-value=14 Score=35.16 Aligned_cols=44 Identities=14% Similarity=0.066 Sum_probs=29.9
Q ss_pred EEEeeCCCCCcccHHHHH------------HHHHHHHHHHHhc--CCCCCceeEEecCCC
Q 045960 3 RFADLGCSSGPNALLPTW------------EAIDSLDKICHRL--NRKPPVLHSFLNDLP 48 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~------------~ii~~i~~~~~~~--~~~~~~~~v~~nDlP 48 (300)
+|+|+||++|..++.+.. ..++..++..... |. ..++++..|..
T Consensus 96 ~VLDLgcG~G~~al~LA~~g~~V~~VD~s~~~l~~Ar~N~~~~~~gl--~~i~~i~~Da~ 153 (410)
T 3ll7_A 96 KVVDLTGGLGIDFIALMSKASQGIYIERNDETAVAARHNIPLLLNEG--KDVNILTGDFK 153 (410)
T ss_dssp EEEESSCSSSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHSCTT--CEEEEEESCGG
T ss_pred EEEEeCCCchHHHHHHHhcCCEEEEEECCHHHHHHHHHhHHHhccCC--CcEEEEECcHH
Confidence 699999999999887653 3556666554433 32 34777777754
No 269
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=45.29 E-value=7.8 Score=35.30 Aligned_cols=49 Identities=12% Similarity=0.006 Sum_probs=32.9
Q ss_pred cCCCCcccEEEeccccccccCCCCCCCCCHHHHHHHHHhHH-HHHHHHHHHHHHhhccC--ceeEEEEe
Q 045960 90 LFPHNFLDFVYSSYALHWLSRMPKGQGNESDVHKAFLNQFE-SDFSTFLKFRSEELKSQ--GRMVLTLL 155 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS~vP~~~~n~~~v~~ay~~q~~-~D~~~fL~~Ra~EL~~G--G~~vl~~~ 155 (300)
-+|...+|+|.|-.|.+ |-.+ .+ +|+. -++ |..=.+-|+|| |.||+=++
T Consensus 151 ~l~~~~~DvVLSDmApn--sG~~-------~~-----D~~rs~~L---L~~A~~~Lk~g~~G~Fv~KvF 202 (282)
T 3gcz_A 151 NMEVIPGDTLLCDIGES--SPSI-------AV-----EEQRTLRV---LNCAKQWLQEGNYTEFCIKVL 202 (282)
T ss_dssp GSCCCCCSEEEECCCCC--CSCH-------HH-----HHHHHHHH---HHHHHHHHHHHCCCEEEEEES
T ss_pred hcCCCCcCEEEecCccC--CCCh-------HH-----HHHHHHHH---HHHHHHHcCCCCCCcEEEEEe
Confidence 36788999999999887 4322 12 2221 123 66666779999 99998775
No 270
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=45.03 E-value=40 Score=29.95 Aligned_cols=61 Identities=18% Similarity=0.243 Sum_probs=33.8
Q ss_pred cCCCCcccEEEecccccccc---CCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEe
Q 045960 90 LFPHNFLDFVYSSYALHWLS---RMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLL 155 (300)
Q Consensus 90 l~P~~sv~~~~Ss~alHWLS---~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~ 155 (300)
.+|++++|+|+|+==.+=.. ..+.. ... ...| ..+..++..+++.-.+-|+|||.+++.+.
T Consensus 35 ~l~~~s~DlIvtdPPY~~~~~y~~~~~~---~~~-~~~~-~~~l~~l~~~~~~~~rvLk~~G~l~i~~~ 98 (297)
T 2zig_A 35 SFPEASVHLVVTSPPYWTLKRYEDTPGQ---LGH-IEDY-EAFLDELDRVWREVFRLLVPGGRLVIVVG 98 (297)
T ss_dssp TSCTTCEEEEEECCCCCCCC-------C---CHH-HHHH-HHHHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred hCCCCceeEEEECCCCCCccccCCChhh---hcc-cccH-HHHHHHHHHHHHHHHHHcCCCcEEEEEEC
Confidence 46888999999862221100 00100 001 1111 22334456667777788999999999875
No 271
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=44.89 E-value=6.6 Score=34.73 Aligned_cols=18 Identities=11% Similarity=0.100 Sum_probs=15.5
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|.|+||++|..|+.+..
T Consensus 86 ~VLDlgcG~G~~a~~lA~ 103 (258)
T 2r6z_A 86 TVWDATAGLGRDSFVLAS 103 (258)
T ss_dssp CEEETTCTTCHHHHHHHH
T ss_pred eEEEeeCccCHHHHHHHH
Confidence 689999999999987654
No 272
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=42.11 E-value=9.5 Score=34.31 Aligned_cols=17 Identities=35% Similarity=0.509 Sum_probs=14.3
Q ss_pred eEEEeeCCCCCcccHHH
Q 045960 2 IRFADLGCSSGPNALLP 18 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~ 18 (300)
.+|.|+|||.|..|..+
T Consensus 80 ~~VvDLGaapGGWSq~~ 96 (267)
T 3p8z_A 80 GRVIDLGCGRGGWSYYC 96 (267)
T ss_dssp EEEEEESCTTSHHHHHH
T ss_pred CEEEEcCCCCCcHHHHH
Confidence 47999999999998743
No 273
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=41.26 E-value=9.8 Score=34.59 Aligned_cols=19 Identities=11% Similarity=-0.064 Sum_probs=16.9
Q ss_pred EEEeeCCCCCcccHHHHHH
Q 045960 3 RFADLGCSSGPNALLPTWE 21 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ 21 (300)
+|.|+||++|..|+.+++.
T Consensus 29 ~vLD~g~G~G~~s~~la~~ 47 (301)
T 1m6y_A 29 IILDCTVGEGGHSRAILEH 47 (301)
T ss_dssp EEEETTCTTSHHHHHHHHH
T ss_pred EEEEEeCCcCHHHHHHHHH
Confidence 6899999999999988765
No 274
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=40.75 E-value=12 Score=35.44 Aligned_cols=18 Identities=33% Similarity=0.322 Sum_probs=15.6
Q ss_pred EEEeeCCCCCcccHHHHH
Q 045960 3 RFADLGCSSGPNALLPTW 20 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~ 20 (300)
+|+|+||++|..++.+..
T Consensus 289 ~VLDlgcG~G~~~~~la~ 306 (433)
T 1uwv_A 289 RVLDLFCGMGNFTLPLAT 306 (433)
T ss_dssp EEEEESCTTTTTHHHHHT
T ss_pred EEEECCCCCCHHHHHHHh
Confidence 699999999999987653
No 275
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=39.74 E-value=42 Score=30.31 Aligned_cols=53 Identities=26% Similarity=0.415 Sum_probs=32.7
Q ss_pred cCCCCcccEEEec--ccc----ccccCCCCCCCCCHHHHHHHHHhHHHHHHHHHHHHHHhhccCceeEEEEee
Q 045960 90 LFPHNFLDFVYSS--YAL----HWLSRMPKGQGNESDVHKAFLNQFESDFSTFLKFRSEELKSQGRMVLTLLY 156 (300)
Q Consensus 90 l~P~~sv~~~~Ss--~al----HWLS~vP~~~~n~~~v~~ay~~q~~~D~~~fL~~Ra~EL~~GG~~vl~~~g 156 (300)
.+|++++|+|++. |.. +|- +. - ...+...+...|+.-.+=|+|||.+++.+.-
T Consensus 28 ~l~~~svDlI~tDPPY~~~~~~~y~--------~~--~----~~~~~~~l~~~l~~~~rvLk~~G~i~i~~~d 86 (323)
T 1boo_A 28 SFPEESISLVMTSPPFALQRKKEYG--------NL--E----QHEYVDWFLSFAKVVNKKLKPDGSFVVDFGG 86 (323)
T ss_dssp GSCSSCEEEEEECCCCSSSCSCSSC--------SC--H----HHHHHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred hCCCCCeeEEEECCCCCCCcccccC--------Cc--C----HHHHHHHHHHHHHHHHHHCcCCcEEEEEECC
Confidence 4678889998886 221 120 00 1 1223445556666666779999999998853
No 276
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=39.62 E-value=9 Score=35.41 Aligned_cols=35 Identities=17% Similarity=0.076 Sum_probs=23.5
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCc
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSD 51 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~ND 51 (300)
-+|.|+|||.|..|..+.. +..+ -.|+--|+=.++
T Consensus 96 ~~VlDLGaapGGwsq~~~~--------------~~gv-~~V~avdvG~~~ 130 (321)
T 3lkz_A 96 GKVIDLGCGRGGWCYYMAT--------------QKRV-QEVRGYTKGGPG 130 (321)
T ss_dssp EEEEEETCTTCHHHHHHTT--------------CTTE-EEEEEECCCSTT
T ss_pred CEEEEeCCCCCcHHHHHHh--------------hcCC-CEEEEEEcCCCC
Confidence 3799999999999874321 1122 267777877664
No 277
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=38.39 E-value=40 Score=30.44 Aligned_cols=19 Identities=11% Similarity=-0.025 Sum_probs=16.3
Q ss_pred EEEeeCCCCCcccHHHHHH
Q 045960 3 RFADLGCSSGPNALLPTWE 21 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ 21 (300)
+|.|+||+.|.-|+.+...
T Consensus 105 ~VLDlcaG~G~kt~~la~~ 123 (309)
T 2b9e_A 105 HVIDACAAPGNKTSHLAAL 123 (309)
T ss_dssp EEEESSCTTCHHHHHHHHH
T ss_pred EEEEeCCChhHHHHHHHHH
Confidence 7999999999999876653
No 278
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=38.09 E-value=14 Score=34.43 Aligned_cols=24 Identities=8% Similarity=0.105 Sum_probs=20.0
Q ss_pred HHHHHHHHHHHHhhccCceeEEEE
Q 045960 131 SDFSTFLKFRSEELKSQGRMVLTL 154 (300)
Q Consensus 131 ~D~~~fL~~Ra~EL~~GG~~vl~~ 154 (300)
+++..++..-.+-|+|||.+++..
T Consensus 316 ~~~~~~l~~~~~~LkpgG~l~~~~ 339 (396)
T 3c0k_A 316 RGYKDINMLAIQLLNEGGILLTFS 339 (396)
T ss_dssp THHHHHHHHHHHTEEEEEEEEEEE
T ss_pred HHHHHHHHHHHHhcCCCcEEEEEe
Confidence 456778888889999999998876
No 279
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=36.62 E-value=16 Score=30.19 Aligned_cols=17 Identities=12% Similarity=0.028 Sum_probs=14.1
Q ss_pred EEEeeCCCCCc-ccHHHH
Q 045960 3 RFADLGCSSGP-NALLPT 19 (300)
Q Consensus 3 ~iaD~Gcs~G~-Nsl~~~ 19 (300)
+|+|+||+.|. |+..+.
T Consensus 38 rVlEVG~G~g~~vA~~La 55 (153)
T 2k4m_A 38 RVVEVGAGRFLYVSDYIR 55 (153)
T ss_dssp EEEEETCTTCCHHHHHHH
T ss_pred cEEEEccCCChHHHHHHH
Confidence 79999999995 887543
No 280
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=35.48 E-value=14 Score=35.16 Aligned_cols=17 Identities=12% Similarity=0.212 Sum_probs=14.8
Q ss_pred EEEeeCCCCCcccHHHH
Q 045960 3 RFADLGCSSGPNALLPT 19 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~ 19 (300)
+|.|+||++|..++.+.
T Consensus 293 ~VLDlgcG~G~~sl~la 309 (425)
T 2jjq_A 293 KILDMYSGVGTFGIYLA 309 (425)
T ss_dssp EEEEETCTTTHHHHHHH
T ss_pred EEEEeeccchHHHHHHH
Confidence 68999999999998654
No 281
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=34.06 E-value=12 Score=34.61 Aligned_cols=24 Identities=17% Similarity=0.065 Sum_probs=16.5
Q ss_pred CccccccCCCCcccEEEecccccc
Q 045960 84 GSFYTRLFPHNFLDFVYSSYALHW 107 (300)
Q Consensus 84 gSFy~~l~P~~sv~~~~Ss~alHW 107 (300)
+.+..--+|.+++|+++++--.+.
T Consensus 275 ~D~~~~~~~~~~fD~Ii~npPyg~ 298 (373)
T 3tm4_A 275 GDATQLSQYVDSVDFAISNLPYGL 298 (373)
T ss_dssp CCGGGGGGTCSCEEEEEEECCCC-
T ss_pred CChhhCCcccCCcCEEEECCCCCc
Confidence 455555567789999999765543
No 282
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=30.63 E-value=14 Score=33.48 Aligned_cols=19 Identities=26% Similarity=0.445 Sum_probs=15.6
Q ss_pred eEEEeeCCCCCcccHHHHH
Q 045960 2 IRFADLGCSSGPNALLPTW 20 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~ 20 (300)
.+|+|||||-|.=|..+.+
T Consensus 75 ~~VVDLGaAPGGWSQvAa~ 93 (269)
T 2px2_A 75 GKVVDLGCGRGGWSYYAAT 93 (269)
T ss_dssp EEEEEETCTTSHHHHHHTT
T ss_pred CEEEEcCCCCCHHHHHHhh
Confidence 4799999999998876544
No 283
>2v1n_A KIN17, protein KIN homolog; nuclear protein, winged helix motif; NMR {Homo sapiens}
Probab=30.47 E-value=30 Score=27.10 Aligned_cols=26 Identities=27% Similarity=0.429 Sum_probs=23.2
Q ss_pred CCHHHHHHHHHhHHHHHHHHHHHHHH
Q 045960 117 NESDVHKAFLNQFESDFSTFLKFRSE 142 (300)
Q Consensus 117 n~~~v~~ay~~q~~~D~~~fL~~Ra~ 142 (300)
||..+...|++||++||-..|+.|..
T Consensus 11 n~~k~i~~fS~eF~~~Fl~lLr~~~g 36 (111)
T 2v1n_A 11 NPQQFMDYFSEEFRNDFLELLRRRFG 36 (111)
T ss_dssp CGGGCHHHHHHHHHHHHHHHHHHHTS
T ss_pred CHhhHHHHHHHHHHHHHHHHHHHhcC
Confidence 57889999999999999999998854
No 284
>1nvp_D Transcription initiation factor IIA gamma chain; transcription regulation, DNA, complex, transcription/DNA complex; 2.10A {Homo sapiens} SCOP: a.32.1.1 b.56.1.1
Probab=30.37 E-value=39 Score=26.26 Aligned_cols=24 Identities=8% Similarity=0.090 Sum_probs=21.2
Q ss_pred hHHHHHHHHHHHcCCCchhhhccc
Q 045960 166 EPMLMVLKDMISEGLAEESKVKSF 189 (300)
Q Consensus 166 ~~l~~al~~mv~eG~i~~e~~d~f 189 (300)
..|.++|+||+.+|.|+++.....
T Consensus 12 ~aL~dtLdEli~~~~Isp~la~kV 35 (108)
T 1nvp_D 12 NSLQESLDELIQSQQITPQLALQV 35 (108)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHH
Confidence 678999999999999999877665
No 285
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=30.05 E-value=40 Score=31.38 Aligned_cols=19 Identities=21% Similarity=0.230 Sum_probs=15.3
Q ss_pred EEEeeCCCCCcccHHHHHH
Q 045960 3 RFADLGCSSGPNALLPTWE 21 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~~~ 21 (300)
+|.|.||++|.-.+.+...
T Consensus 198 ~vlDp~CGSGt~lieaa~~ 216 (385)
T 3ldu_A 198 VLVDPMCGSGTILIEAAMI 216 (385)
T ss_dssp CEEETTCTTCHHHHHHHHH
T ss_pred eEEEcCCCCCHHHHHHHHH
Confidence 6899999999887766543
No 286
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=28.68 E-value=19 Score=33.16 Aligned_cols=17 Identities=24% Similarity=0.409 Sum_probs=14.9
Q ss_pred EEEeeCCCCCcccHHHH
Q 045960 3 RFADLGCSSGPNALLPT 19 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~ 19 (300)
+|.|+||++|..|+.+.
T Consensus 216 ~vLDl~cG~G~~~l~la 232 (369)
T 3bt7_A 216 DLLELYCGNGNFSLALA 232 (369)
T ss_dssp EEEEESCTTSHHHHHHG
T ss_pred EEEEccCCCCHHHHHHH
Confidence 68999999999999654
No 287
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=28.25 E-value=75 Score=28.67 Aligned_cols=19 Identities=32% Similarity=0.452 Sum_probs=15.8
Q ss_pred eEEEeeCCCCCcccHHHHH
Q 045960 2 IRFADLGCSSGPNALLPTW 20 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~ 20 (300)
-+|.|||||.|.-|..++.
T Consensus 76 ~~VLDLGaAPGGWSQvAa~ 94 (277)
T 3evf_A 76 GRVIDLGCGRGGWCYYAAA 94 (277)
T ss_dssp EEEEEETCTTCHHHHHHHT
T ss_pred CEEEEecCCCCHHHHHHHH
Confidence 3799999999999886654
No 288
>1q1h_A TFE, transcription factor E, TFE; TFIIE, transcription initiation, preinitiation complex, RNA polymerase II, transcription bubble; 2.90A {Sulfolobus solfataricus} SCOP: a.4.5.41
Probab=27.37 E-value=29 Score=25.83 Aligned_cols=42 Identities=12% Similarity=0.240 Sum_probs=28.6
Q ss_pred hHHHHHHHHHHHcCCCchh----hhccccCCCcccCCHHHHHHHHHh
Q 045960 166 EPMLMVLKDMISEGLAEES----KVKSFEDFPIYRASVDEVKQIVKK 208 (300)
Q Consensus 166 ~~l~~al~~mv~eG~i~~e----~~d~f~~~P~y~~s~eE~~~~i~~ 208 (300)
..+..++..|.++|+|... .-... ...+|..+.+++...++.
T Consensus 48 ~tV~~~L~~L~~~GlV~~~~~~~~~~g~-~v~~~~~~~~~i~~~~~~ 93 (110)
T 1q1h_A 48 NDVRKKLNLLEEQGFVSYRKTRDKDSGW-FIYYWKPNIDQINEILLN 93 (110)
T ss_dssp HHHHHHHHHHHHHTSCEEEEEC---CCC-CEEEEECTHHHHC-----
T ss_pred HHHHHHHHHHHHCCCEEEEecccCCCce-EEEEeecCHHHHHHHHHH
Confidence 7899999999999999876 44444 455567899988877763
No 289
>1nh2_D Transcription initiation factor IIA small chain; transcription/DNA; HET: 5IU; 1.90A {Saccharomyces cerevisiae} SCOP: a.32.1.1 b.56.1.1 PDB: 1ytf_D* 1rm1_B
Probab=26.35 E-value=49 Score=26.22 Aligned_cols=24 Identities=25% Similarity=0.350 Sum_probs=21.3
Q ss_pred hHHHHHHHHHHHcCCCchhhhccc
Q 045960 166 EPMLMVLKDMISEGLAEESKVKSF 189 (300)
Q Consensus 166 ~~l~~al~~mv~eG~i~~e~~d~f 189 (300)
..|.++|+||+.+|.|+++.....
T Consensus 16 ~aL~dtLdEli~~~~Isp~la~kV 39 (121)
T 1nh2_D 16 NSLVDALDTLISDGRIEASLAMRV 39 (121)
T ss_dssp HHHHHHHHHHHHTTSSCHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCCHHHHHHH
Confidence 689999999999999999877665
No 290
>1d0q_A DNA primase; zinc-binding motif, protein, transferase; HET: DNA; 1.71A {Geobacillus stearothermophilus} SCOP: g.41.3.2
Probab=26.19 E-value=47 Score=24.97 Aligned_cols=31 Identities=19% Similarity=0.491 Sum_probs=21.3
Q ss_pred EEeeCCCCCcccHHHHHHH-----HHHHHHHHHhcC
Q 045960 4 FADLGCSSGPNALLPTWEA-----IDSLDKICHRLN 34 (300)
Q Consensus 4 iaD~Gcs~G~Nsl~~~~~i-----i~~i~~~~~~~~ 34 (300)
.-++||+.|+|.+-++..+ .++++......|
T Consensus 59 ~~Cf~cg~gGd~i~fv~~~~~~sf~eA~~~La~~~g 94 (103)
T 1d0q_A 59 FHCFGCGAGGNAFTFLMDIEGIPFVEAAKRLAAKAG 94 (103)
T ss_dssp EEETTTCCEECHHHHHHHHHTCCHHHHHHHHHHHHT
T ss_pred EEECCCCCCCCHHHHHHHHhCCCHHHHHHHHHHHhC
Confidence 3489999999999888764 455555443334
No 291
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=25.80 E-value=43 Score=28.66 Aligned_cols=39 Identities=13% Similarity=0.314 Sum_probs=32.1
Q ss_pred hHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHh
Q 045960 166 EPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKK 208 (300)
Q Consensus 166 ~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~ 208 (300)
+.+.+-++.|+++|.|+++..+.+ .+..+++|+-+.|++
T Consensus 160 ~~l~~~l~~~~~~Gfi~~~~~~~i----~~~d~~~e~~~~l~~ 198 (199)
T 3qua_A 160 DGLLTWLRGLVPTGYVSQRAMDSL----VVVDNVEAALEACAP 198 (199)
T ss_dssp HHHHHHHHHTTTTTSSCHHHHHTS----EEESSHHHHHHHHSC
T ss_pred hHHHHHHHHHHHCCCCCHHHCCeE----EEeCCHHHHHHHHhc
Confidence 566677789999999999877665 578999999988874
No 292
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=25.16 E-value=37 Score=34.95 Aligned_cols=21 Identities=19% Similarity=0.098 Sum_probs=16.8
Q ss_pred eEEEeeCCCCCcccHHHHHHH
Q 045960 2 IRFADLGCSSGPNALLPTWEA 22 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~i 22 (300)
.+|+|+||++|+-+...+...
T Consensus 411 ~VVldVGaGtGpLs~~al~A~ 431 (745)
T 3ua3_A 411 VVIYLLGGGRGPIGTKILKSE 431 (745)
T ss_dssp EEEEEESCTTCHHHHHHHHHH
T ss_pred cEEEEECCCCCHHHHHHHHHH
Confidence 479999999999987665544
No 293
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=25.01 E-value=34 Score=31.33 Aligned_cols=23 Identities=26% Similarity=0.273 Sum_probs=19.1
Q ss_pred CeEEEeeCCCCCcccHHHHHHHH
Q 045960 1 CIRFADLGCSSGPNALLPTWEAI 23 (300)
Q Consensus 1 ~~~iaD~Gcs~G~Nsl~~~~~ii 23 (300)
+|+|+|+|=++|-|.+..+....
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~ 119 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLW 119 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHH
Confidence 37999999999999988776543
No 294
>2lmc_A Bacterial RNA polymerase inhibitor; transferase, transcription; NMR {Enterobacteria phage T7} PDB: 2wnm_A
Probab=24.93 E-value=55 Score=23.96 Aligned_cols=31 Identities=32% Similarity=0.752 Sum_probs=25.5
Q ss_pred ccccCCCcccCCHHHHHHHHH----hcCCeeEEEEEE
Q 045960 187 KSFEDFPIYRASVDEVKQIVK----KEGSFDIQEVET 219 (300)
Q Consensus 187 d~f~~~P~y~~s~eE~~~~i~----~~gsF~I~~~e~ 219 (300)
.+| -+|+|..|.||-..+-| ++| |.|.|+..
T Consensus 45 ~s~-EVPV~A~sLdEAlE~AE~eYeeaG-F~V~RVRP 79 (84)
T 2lmc_A 45 HSF-EVPIYAETLDEALELAEWQYVPAG-FEVTRVRP 79 (84)
T ss_dssp CEE-EEEECCSSHHHHHHHHHHTTGGGT-CEEEEEEE
T ss_pred ceE-EEeeecccHHHHHHHHHHHhhhcc-ceEEEecc
Confidence 568 79999999999988877 345 99988754
No 295
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=24.06 E-value=24 Score=31.30 Aligned_cols=19 Identities=16% Similarity=0.135 Sum_probs=16.7
Q ss_pred eEEEeeCCCCCcccHHHHH
Q 045960 2 IRFADLGCSSGPNALLPTW 20 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~ 20 (300)
-+|.|+||+.|.-++.+.+
T Consensus 90 ~~VLDl~~G~G~dal~lA~ 108 (258)
T 2oyr_A 90 PDVVDATAGLGRDAFVLAS 108 (258)
T ss_dssp CCEEETTCTTCHHHHHHHH
T ss_pred CEEEEcCCcCCHHHHHHHH
Confidence 3799999999999998776
No 296
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=23.67 E-value=30 Score=32.30 Aligned_cols=19 Identities=11% Similarity=-0.038 Sum_probs=16.2
Q ss_pred eEEEeeCCCCCcccHHHHH
Q 045960 2 IRFADLGCSSGPNALLPTW 20 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~ 20 (300)
-+|.|+||++|.-++.+..
T Consensus 49 ~~VLDl~aGtG~~~l~~a~ 67 (378)
T 2dul_A 49 KIVLDALSATGIRGIRFAL 67 (378)
T ss_dssp SEEEESSCTTSHHHHHHHH
T ss_pred CEEEECCCchhHHHHHHHH
Confidence 3799999999999987665
No 297
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=22.51 E-value=30 Score=30.74 Aligned_cols=17 Identities=12% Similarity=0.100 Sum_probs=13.9
Q ss_pred EEEeeCCCCCcccHHHH
Q 045960 3 RFADLGCSSGPNALLPT 19 (300)
Q Consensus 3 ~iaD~Gcs~G~Nsl~~~ 19 (300)
+|.|++|++|..++.+.
T Consensus 238 ~vlD~f~GsGt~~~~a~ 254 (297)
T 2zig_A 238 VVLDPFAGTGTTLIAAA 254 (297)
T ss_dssp EEEETTCTTTHHHHHHH
T ss_pred EEEECCCCCCHHHHHHH
Confidence 68999999998777543
No 298
>3ol0_A De novo designed monomer trefoil-fold SUB-domain forms HOMO-trimer assembly; beta-trefoil, synthetic protein, function-COMP only; 1.48A {Synthetic construct}
Probab=22.32 E-value=43 Score=22.23 Aligned_cols=25 Identities=16% Similarity=0.263 Sum_probs=21.4
Q ss_pred CceeeeecCCccccccCCCCcccEE
Q 045960 75 GSCFVAASPGSFYTRLFPHNFLDFV 99 (300)
Q Consensus 75 ~~~f~~~vpgSFy~~l~P~~sv~~~ 99 (300)
-++..-.+.+-||=|++|+.+|+=.
T Consensus 6 ~~~~~~~~~~Gf~LqI~PdG~V~GT 30 (48)
T 3ol0_A 6 HPVLLKSTETGQYLRINPDGTVDGT 30 (48)
T ss_dssp CCEEEEETTTCCEEEECTTSBEEEE
T ss_pred CcchheeccCcEEeEECCCCCCccc
Confidence 3677778999999999999999865
No 299
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=21.11 E-value=37 Score=32.05 Aligned_cols=70 Identities=11% Similarity=0.053 Sum_probs=43.5
Q ss_pred eEEEeeCCCCCcccHHHHHHHHHHHHHHHHhcCCCCCceeEEecCCCCCchHHHhhcChhhHHHHhhhcCCCCCceeeee
Q 045960 2 IRFADLGCSSGPNALLPTWEAIDSLDKICHRLNRKPPVLHSFLNDLPRSDFNTVFKSLPSFYERLRTEKGHEFGSCFVAA 81 (300)
Q Consensus 2 ~~iaD~Gcs~G~Nsl~~~~~ii~~i~~~~~~~~~~~~~~~v~~nDlP~NDFn~Lf~~l~~~~~~~~~~~~~~~~~~f~~~ 81 (300)
.+++|+|||.|+=|-.+++. | ..|+--|.-. |.+ ++... +++ .-
T Consensus 213 ~~vlDLGAaPGGWT~~l~~r------------g-----~~V~aVD~~~---------l~~---~l~~~-----~~V--~~ 256 (375)
T 4auk_A 213 MWAVDLGACPGGWTYQLVKR------------N-----MWVYSVDNGP---------MAQ---SLMDT-----GQV--TW 256 (375)
T ss_dssp CEEEEETCTTCHHHHHHHHT------------T-----CEEEEECSSC---------CCH---HHHTT-----TCE--EE
T ss_pred CEEEEeCcCCCHHHHHHHHC------------C-----CEEEEEEhhh---------cCh---hhccC-----CCe--EE
Confidence 37999999999998765431 1 4688888421 211 11111 222 22
Q ss_pred cCCccccccCCCCcccEEEecccccc
Q 045960 82 SPGSFYTRLFPHNFLDFVYSSYALHW 107 (300)
Q Consensus 82 vpgSFy~~l~P~~sv~~~~Ss~alHW 107 (300)
+-+..+....+...+|.++|=.+.+|
T Consensus 257 ~~~d~~~~~~~~~~~D~vvsDm~~~p 282 (375)
T 4auk_A 257 LREDGFKFRPTRSNISWMVCDMVEKP 282 (375)
T ss_dssp ECSCTTTCCCCSSCEEEEEECCSSCH
T ss_pred EeCccccccCCCCCcCEEEEcCCCCh
Confidence 45667776777788999999776655
No 300
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=20.92 E-value=86 Score=26.31 Aligned_cols=39 Identities=31% Similarity=0.467 Sum_probs=32.3
Q ss_pred hHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHh
Q 045960 166 EPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKK 208 (300)
Q Consensus 166 ~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~ 208 (300)
+.+.+-++.|+++|.|+++..+.+ .+..+++|+.+.+++
T Consensus 140 ~~l~~~l~~~~~~Gfi~~~~~~~~----~~~~~~~e~~~~l~~ 178 (191)
T 1t35_A 140 EPMMKMVKYSIQEGFSNESHLKLI----HSSSRPDELIEQMQN 178 (191)
T ss_dssp HHHHHHHHHHHHTTSSCTTHHHHE----EEESSHHHHHHHHHT
T ss_pred chHHHHHHHHHHCCCCCHHHcCeE----EEeCCHHHHHHHHHH
Confidence 556666789999999999887765 578999999999975
No 301
>1sse_A AP-1 like transcription factor YAP1; disulfide bond, nuclear export signal, NES, redox- regulation, transcription activator; NMR {Saccharomyces cerevisiae} SCOP: g.78.1.1
Probab=20.85 E-value=36 Score=20.96 Aligned_cols=9 Identities=33% Similarity=0.678 Sum_probs=7.5
Q ss_pred cCCCCCchH
Q 045960 45 NDLPRSDFN 53 (300)
Q Consensus 45 nDlP~NDFn 53 (300)
+++++||||
T Consensus 4 s~~~S~~~n 12 (35)
T 1sse_A 4 SNMFSNDFN 12 (35)
T ss_dssp CSSCCCCGG
T ss_pred ccccccccC
Confidence 688999876
No 302
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=20.17 E-value=91 Score=26.78 Aligned_cols=39 Identities=10% Similarity=0.293 Sum_probs=32.4
Q ss_pred hHHHHHHHHHHHcCCCchhhhccccCCCcccCCHHHHHHHHHh
Q 045960 166 EPMLMVLKDMISEGLAEESKVKSFEDFPIYRASVDEVKQIVKK 208 (300)
Q Consensus 166 ~~l~~al~~mv~eG~i~~e~~d~f~~~P~y~~s~eE~~~~i~~ 208 (300)
+.|.+-++.|+.+|.|+++..+.+ .+..+++|+-..|++
T Consensus 152 ~~l~~~l~~~~~~Gfi~~~~~~~~----~~~d~~ee~~~~l~~ 190 (215)
T 2a33_A 152 NSLLSFIDKAVEEGFISPTAREII----VSAPTAKELVKKLEE 190 (215)
T ss_dssp HHHHHHHHHHHHHTSSCHHHHTTE----EEESSHHHHHHHHHC
T ss_pred HHHHHHHHHHHHcCCCCHHHCCeE----EEeCCHHHHHHHHHH
Confidence 556777799999999998876654 578999999999974
Done!