Query 045966
Match_columns 145
No_of_seqs 126 out of 664
Neff 6.3
Searched_HMMs 29240
Date Mon Mar 25 12:43:09 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045966.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045966hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3g4d_A (+)-delta-cadinene synt 100.0 3.4E-43 1.2E-47 309.6 8.6 127 1-130 428-554 (554)
2 3m00_A Aristolochene synthase; 100.0 3.6E-43 1.2E-47 309.2 8.1 127 1-130 423-550 (550)
3 3n0f_A Isoprene synthase; terp 100.0 9E-43 3.1E-47 307.0 9.0 126 1-129 426-551 (555)
4 1n1b_A (+)-bornyl diphosphate 100.0 5.5E-41 1.9E-45 295.3 9.6 124 3-129 426-549 (549)
5 2ong_A 4S-limonene synthase; m 100.0 1.8E-40 6.1E-45 291.7 10.7 126 1-129 417-543 (543)
6 3sdr_A Alpha-bisabolene syntha 100.0 3.4E-40 1.2E-44 300.8 10.3 127 1-130 688-817 (817)
7 3p5p_A Taxadiene synthase; cla 100.0 3.8E-40 1.3E-44 298.9 9.7 129 1-132 628-758 (764)
8 2j5c_A 1,8-cineole synthase; t 100.0 6.6E-40 2.3E-44 289.5 7.8 125 1-129 444-569 (569)
9 3s9v_A Abietadiene synthase, c 100.0 9.6E-39 3.3E-43 290.3 9.6 124 1-128 659-784 (785)
10 1ps1_A Pentalenene synthase; a 99.8 3.6E-19 1.2E-23 145.6 5.7 72 4-77 196-270 (337)
11 1di1_A Aristolochene synthase; 99.7 7.5E-18 2.6E-22 135.4 5.3 66 12-77 191-264 (300)
12 3kb9_A EPI-isozizaene synthase 99.7 1.5E-17 5.2E-22 139.7 5.9 65 12-76 247-311 (382)
13 3bny_A Aristolochene synthase; 99.6 1.2E-16 4.1E-21 129.8 5.1 66 12-77 205-278 (320)
14 3v1v_A 2-MIB synthase, 2-methy 99.5 8.2E-15 2.8E-19 125.7 5.6 72 3-76 314-389 (433)
15 3pya_A ENT-copalyl diphosphate 99.4 1.8E-13 6.2E-18 123.8 4.2 86 12-129 634-720 (727)
16 1yyq_A Trichodiene synthase; t 96.0 0.0073 2.5E-07 50.6 4.9 84 12-99 211-295 (374)
17 3fau_A NEDD4-binding protein 2 66.3 6 0.0002 25.4 3.4 23 51-73 6-28 (82)
18 1ngm_B Transcription factor II 65.8 3.7 0.00013 26.7 2.2 28 43-79 35-62 (72)
19 4akk_A Nitrate regulatory prot 50.0 9 0.00031 32.0 2.6 52 19-70 348-400 (423)
20 2d9i_A NEDD4-binding protein 2 48.8 16 0.00054 24.0 3.3 22 50-71 13-34 (96)
21 2zqe_A MUTS2 protein; alpha/be 47.9 19 0.00065 23.2 3.5 22 51-72 10-31 (83)
22 1xri_A AT1G05000; structural g 47.1 12 0.00042 25.7 2.6 28 38-65 104-131 (151)
23 1tr8_A Conserved protein (MTH1 42.2 15 0.00053 25.0 2.4 27 38-64 63-89 (102)
24 3rz2_A Protein tyrosine phosph 41.6 19 0.00066 26.0 3.0 28 37-64 128-155 (189)
25 3s4o_A Protein tyrosine phosph 40.0 21 0.00071 24.6 2.9 27 38-64 121-148 (167)
26 1wy6_A Hypothetical protein ST 39.6 38 0.0013 25.1 4.3 44 19-62 56-101 (172)
27 3qd7_X Uncharacterized protein 36.8 32 0.0011 24.4 3.5 36 35-72 39-74 (137)
28 1rxd_A Protein tyrosine phosph 34.8 29 0.00098 23.6 2.9 28 38-65 108-135 (159)
29 1yn9_A BVP, polynucleotide 5'- 32.2 18 0.0006 25.5 1.4 27 38-64 125-152 (169)
30 3ic3_A Putative pyruvate dehyd 29.5 67 0.0023 22.0 3.9 37 19-66 47-83 (101)
31 3hdf_A Lysozyme; antimicrobial 28.9 1.5E+02 0.005 20.7 6.0 41 52-95 40-80 (140)
32 3s4e_A Dual specificity protei 28.6 32 0.0011 23.4 2.3 27 39-65 94-121 (144)
33 3ezz_A Dual specificity protei 27.9 25 0.00085 23.9 1.6 26 39-64 94-120 (144)
34 2c46_A MRNA capping enzyme; ph 26.6 30 0.001 26.5 1.9 27 38-64 153-180 (241)
35 4evx_A Putative phage endolysi 25.4 1.5E+02 0.0051 19.6 6.1 42 52-96 49-94 (106)
36 3emu_A Leucine rich repeat and 25.4 59 0.002 22.8 3.3 54 12-65 67-127 (161)
37 3tqc_A Pantothenate kinase; bi 25.2 42 0.0014 26.9 2.7 51 12-75 236-287 (321)
38 4aqn_A Pesticin; toxin, bacter 25.1 94 0.0032 25.7 4.7 60 42-110 239-307 (357)
39 2o6n_A RH4B designed peptide; 24.0 93 0.0032 16.7 3.4 24 55-78 4-27 (35)
40 3hde_A Lysozyme; antimicrobial 24.0 2E+02 0.0069 20.6 6.0 42 52-96 65-110 (165)
41 1fc3_A SPO0A; response regulat 23.6 1.1E+02 0.0039 21.1 4.4 48 49-97 56-114 (120)
42 2vkc_A NEDD4-binding protein 2 23.6 64 0.0022 22.5 3.1 26 45-70 53-78 (135)
43 4e97_A Lysozyme; hydrolase, al 23.5 82 0.0028 23.0 3.8 44 53-97 81-131 (187)
44 2img_A Dual specificity protei 23.3 47 0.0016 22.2 2.3 27 38-64 101-128 (151)
45 1xju_A Lysozyme; secreted inac 22.9 1.9E+02 0.0064 20.7 5.7 44 52-97 43-90 (163)
46 2hxp_A Dual specificity protei 22.7 47 0.0016 23.0 2.3 27 39-65 98-125 (155)
47 2ckx_A NGTRF1, telomere bindin 22.7 1.6E+02 0.0055 18.9 6.1 53 69-123 22-76 (83)
48 3mtu_A Tropomyosin alpha-1 cha 22.4 31 0.0011 22.0 1.1 18 95-112 57-74 (75)
49 1zzw_A Dual specificity protei 22.3 49 0.0017 22.4 2.3 27 39-65 96-123 (149)
50 2aje_A Telomere repeat-binding 22.2 1.9E+02 0.0064 19.5 5.3 53 69-123 35-89 (105)
51 3f81_A Dual specificity protei 21.4 52 0.0018 23.2 2.3 28 38-65 127-155 (183)
52 1esx_A VPR protein; helix, amp 21.1 68 0.0023 21.7 2.7 50 67-125 20-69 (96)
53 1yoz_A Hypothetical protein AF 21.1 96 0.0033 21.3 3.4 52 13-65 8-67 (116)
54 3ipi_A Geranyltranstransferase 21.0 2E+02 0.0067 22.7 5.8 61 13-74 194-261 (295)
55 1fpz_A Cyclin-dependent kinase 20.9 63 0.0021 23.5 2.7 28 38-65 145-174 (212)
56 1yz4_A DUSP15, dual specificit 20.9 50 0.0017 22.8 2.1 25 40-64 98-123 (160)
57 1lj2_A NSP3-C, nonstructural R 20.9 58 0.002 22.5 2.3 19 38-56 34-52 (110)
58 1uzc_A Hypothetical protein FL 20.2 72 0.0024 20.1 2.5 17 53-69 12-28 (71)
59 2nt2_A Protein phosphatase sli 20.1 59 0.002 22.0 2.3 26 40-65 95-121 (145)
60 3rgo_A Protein-tyrosine phosph 20.0 59 0.002 22.0 2.3 26 39-64 102-128 (157)
No 1
>3g4d_A (+)-delta-cadinene synthase isozyme XC1; cyclase, lyase, magnesium, metal-binding; 2.40A {Gossypium arboreum} PDB: 3g4f_A*
Probab=100.00 E-value=3.4e-43 Score=309.55 Aligned_cols=127 Identities=28% Similarity=0.448 Sum_probs=112.4
Q ss_pred CcccccccCCchhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 045966 1 KELEFLESNNIPDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYRANK 80 (145)
Q Consensus 1 e~~ew~~~~~~p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~l~~ 80 (145)
|+|+|+.++ |+|++++++|+||+|||+||++|++||+++|+|+|||||||+|+|+|+++++++|+++||+||++++++
T Consensus 428 e~~e~~~~~--p~i~~~~~~I~RL~NDI~S~k~E~~rG~van~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~ 505 (554)
T 3g4d_A 428 ETFKWAASD--PKIIQASTIICRFMDDVAEHKFKHRREDDCSAIECYMEEYGVTAQEAYDVFNKHVESAWKDLNQEFLKP 505 (554)
T ss_dssp HHHHHHHTC--CHHHHHHHHHHHHHHHHHHHCC------CCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred HHHHhcccc--HHHHHHHHHHHHHhcccchhhhhhccCCccHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 468999989 999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcHHHHHHHHHHhhhhhhccccCCCCCCCchhHHHHHHhhccccccC
Q 045966 81 DSPLSQTTADFMLNLVRASHFMYLHGDGHGVQNQETMDVAFTLLFRPIPL 130 (145)
Q Consensus 81 ~~~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t~~~~~~k~~I~sll~~Pi~i 130 (145)
+ ++|++|+++++|+||++++||+++||||.|+..||++|++||++|||+
T Consensus 506 ~-~~p~~~~~~~~NlaR~~~~~Y~~~Dg~t~~~~~~k~~i~~ll~~Pi~l 554 (554)
T 3g4d_A 506 T-EMPTEVLNRSLNLARVMDVLYREGDGYTYVGKAAKGGITSLLIEPIAL 554 (554)
T ss_dssp C-SSCHHHHHHHHHHHHHHHHHSCC-----CCCHHHHHHHHHHHTCCCCC
T ss_pred C-CCCHHHHHHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHhcCCCCC
Confidence 8 899999999999999999999999999998778999999999999985
No 2
>3m00_A Aristolochene synthase; plant terpenoid cyclase, lyase binding domain, (2-CIS, 6-trans)-2-fluorofarnesyl diphospha magnesium, metal-binding; HET: 2CF; 2.10A {Nicotiana tabacum} PDB: 3lz9_A* 3m02_A* 3m01_A* 5eau_A* 1hxa_A* 1hx9_A* 1hxc_A* 5eas_A 1hxg_A 4di5_A* 5eat_A*
Probab=100.00 E-value=3.6e-43 Score=309.20 Aligned_cols=127 Identities=28% Similarity=0.454 Sum_probs=119.1
Q ss_pred CcccccccCCchhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 045966 1 KELEFLESNNIPDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYRANK 80 (145)
Q Consensus 1 e~~ew~~~~~~p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~l~~ 80 (145)
++|+|+.++ |+|++++++|+||+|||+||++|++||+++|+|+|||||||+|+|+|+++|+++|+++||+||++++++
T Consensus 423 e~~e~~~~~--p~i~~~~~~I~RL~NDI~S~k~E~~rG~vas~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~ 500 (550)
T 3m00_A 423 QDFEWLSKN--PKILEASVIICRVIDDTATYEVEKSRGQIATGIECCMRDYGISTKEAMAKFQNMAETAWKDINEGLLRP 500 (550)
T ss_dssp HHHHHHHTC--CHHHHHHHHHHHHHHHHHSHHHHHHTTCTTSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTSSS
T ss_pred HHHHhhccc--HHHHHHHhhhheeeccchhHHHHHhcCCcccHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 468999999 999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcHHHHHHHHHHhhhhhhccccC-CCCCCCchhHHHHHHhhccccccC
Q 045966 81 DSPLSQTTADFMLNLVRASHFMYLHG-DGHGVQNQETMDVAFTLLFRPIPL 130 (145)
Q Consensus 81 ~~~vp~~~~~~~~N~aR~~~~~Y~~~-Dg~t~~~~~~k~~I~sll~~Pi~i 130 (145)
+ ++|++|+++++|+||+++++|+++ ||||.|+..||++|++||++|||+
T Consensus 501 ~-~~p~~~~~~~~NlaR~~~~~Y~~~~Dg~t~~~~~~k~~i~~ll~~Pi~~ 550 (550)
T 3m00_A 501 T-PVSTEFLTPILNLARIIEVTYIHNLDGYTHPEKVLKPHIINLLVDSIKI 550 (550)
T ss_dssp C-SSCGGGTHHHHHHHHHHHHHTSCC-----CCHHHHHHHHHHHHTCCCCC
T ss_pred C-CCCHHHHHHHHHHHHHHHHHhCCCCCCCCCccHHHHHHHHHHhhCCCCC
Confidence 8 899999999999999999999998 999999778999999999999985
No 3
>3n0f_A Isoprene synthase; terpene cyclase fold, hemiterpene synthase, DDXXD motif, NSE motif, lyase; 2.70A {Populus tremula x populus alba} PDB: 3n0g_A*
Probab=100.00 E-value=9e-43 Score=307.00 Aligned_cols=126 Identities=35% Similarity=0.609 Sum_probs=119.6
Q ss_pred CcccccccCCchhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 045966 1 KELEFLESNNIPDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYRANK 80 (145)
Q Consensus 1 e~~ew~~~~~~p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~l~~ 80 (145)
|+|+|+.++ |+|++++++|+||+|||+||++|++||+++|+|+|||||||+|+|+|+++++++|+++||+||++++++
T Consensus 426 e~~e~~~~~--p~i~~~~~~i~RL~NDi~S~~~E~~rG~vas~V~cYMke~GvSeEeA~~~i~~~Ie~~wK~lN~e~l~~ 503 (555)
T 3n0f_A 426 EEIENLQKY--HDIISRPSHIFRLCNDLASASAEIARGETANSVSCYMRTKGISEELATESVMNLIDETWKKMNKEKLGG 503 (555)
T ss_dssp HHHHHHHTT--CHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHHHSC
T ss_pred HHHHhcccc--hHHHHHHHHHHHHhccchhhhhhhhcCCcchHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 468999999 999999999999999999999999999999999999999999999999999999999999999999998
Q ss_pred CCCCcHHHHHHHHHHhhhhhhccccCCCCCCCchhHHHHHHhhcccccc
Q 045966 81 DSPLSQTTADFMLNLVRASHFMYLHGDGHGVQNQETMDVAFTLLFRPIP 129 (145)
Q Consensus 81 ~~~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t~~~~~~k~~I~sll~~Pi~ 129 (145)
+ ++|++|+++++|+||++++||+++||||.|+.+||++|++||++|||
T Consensus 504 ~-~~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~~~k~~i~~ll~~Pi~ 551 (555)
T 3n0f_A 504 S-LFAKPFVETAINLARQSHCTYHNGDAHTSPDELTRKRVLSVITEPIL 551 (555)
T ss_dssp C-SSCHHHHHHHHHHHHHHHHHSCCC---CCHHHHHHHHHHHHTTSCCC
T ss_pred C-CCCHHHHHHHHHHHHHHHHHhcCCCCCCCccHHHHHHHHHHHhcCCC
Confidence 7 89999999999999999999999999999877899999999999998
No 4
>1n1b_A (+)-bornyl diphosphate synthase; terpene synthase fold, isomerase; 2.00A {Salvia officinalis} SCOP: a.102.4.1 a.128.1.3 PDB: 1n1z_A* 1n20_A* 1n21_A* 1n22_A* 1n23_A* 1n24_A*
Probab=100.00 E-value=5.5e-41 Score=295.34 Aligned_cols=124 Identities=46% Similarity=0.668 Sum_probs=108.7
Q ss_pred ccccccCCchhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhhhcCCC
Q 045966 3 LEFLESNNIPDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYRANKDS 82 (145)
Q Consensus 3 ~ew~~~~~~p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~l~~~~ 82 (145)
|+|+.++ |++++++++|+||+|||+||++|++||+++|+|+|||||||+|+|+|+++++++|+++||+||+++++++
T Consensus 426 ~e~~~~~--p~i~~~~~~i~RL~NDi~S~~~E~~rG~v~n~V~cyMke~g~s~eeA~~~i~~~i~~~wk~ln~e~l~~~- 502 (549)
T 1n1b_A 426 IDSLYQY--HDILCLAGIILRLPDDLGTSYFELARGDVPKTIQCYMKETNASEEEAVEHVKFLIREAWKDMNTAIAAGY- 502 (549)
T ss_dssp HHHHHTT--CHHHHHHHHHHHHHHHHC---------CCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHTCC-
T ss_pred Hhhhccc--HHHHHHHHHHHHHhcccchhhhhhccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhcCC-
Confidence 8999999 9999999999999999999999999999999999999999999999999999999999999999999988
Q ss_pred CCcHHHHHHHHHHhhhhhhccccCCCCCCCchhHHHHHHhhcccccc
Q 045966 83 PLSQTTADFMLNLVRASHFMYLHGDGHGVQNQETMDVAFTLLFRPIP 129 (145)
Q Consensus 83 ~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t~~~~~~k~~I~sll~~Pi~ 129 (145)
++|++|+++++|+||++++||+++||||.|+.+||++|++||++|||
T Consensus 503 ~vp~~~~~~~~n~~R~~~~~Y~~~Dg~t~~~~~~k~~i~~l~~~pi~ 549 (549)
T 1n1b_A 503 PFPDGMVAGAANIGRVAQFIYLHGDGFGVQHSKTYEHIAGLLFEPYA 549 (549)
T ss_dssp SSCHHHHHHHHHHHHHHHHHTTTSCCC----CHHHHHHHHHHTSCCC
T ss_pred CCCHHHHHHHHHHHHeeehheeCCCCCCCCcHHHHHHHHHHhcCCCC
Confidence 89999999999999999999999999999877899999999999996
No 5
>2ong_A 4S-limonene synthase; monoterpene synthase, monoterpene cyclase, geranyl diphosphate, 2 fluorogeranyl diphosphate linalyl diphosphate; HET: FPG BTB; 2.70A {Mentha spicata} PDB: 2onh_A*
Probab=100.00 E-value=1.8e-40 Score=291.71 Aligned_cols=126 Identities=40% Similarity=0.696 Sum_probs=121.5
Q ss_pred CcccccccCCchhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhh-hc
Q 045966 1 KELEFLESNNIPDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYR-AN 79 (145)
Q Consensus 1 e~~ew~~~~~~p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~-l~ 79 (145)
++|+|+.++ |++++++++|+||+|||+||++|++||+++|+|+|||||||+|+|+|+++++++|+++||+||+++ ++
T Consensus 417 e~~e~~~~~--p~i~~~~~~i~RL~NDi~S~~~E~~rG~~~n~V~cyMke~g~s~eeA~~~i~~~ie~~wk~ln~e~~l~ 494 (543)
T 2ong_A 417 ETVDSLYKY--HDLVRWSSFVLRLADDLGTSVEEVSRGDVPKSLQCYMSDYNASEAEARKHVKWLIAEVWKKMNAERVSK 494 (543)
T ss_dssp HHHHHHTTT--CHHHHHHHHHHHHHHHHHSSHHHHHTSCCCCHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHHHTCS
T ss_pred HHHHHhccc--HHHHHHHHHHHHHhcccchhhhccccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHhccC
Confidence 368999999 999999999999999999999999999999999999999999999999999999999999999999 98
Q ss_pred CCCCCcHHHHHHHHHHhhhhhhccccCCCCCCCchhHHHHHHhhcccccc
Q 045966 80 KDSPLSQTTADFMLNLVRASHFMYLHGDGHGVQNQETMDVAFTLLFRPIP 129 (145)
Q Consensus 80 ~~~~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t~~~~~~k~~I~sll~~Pi~ 129 (145)
++ ++|++|+++++|+||+++++|+++||||.|+..+|++|++||++|||
T Consensus 495 ~~-~vp~~~~~~~~n~aR~~~~~Y~~~D~~t~~~~~~k~~i~~l~~~pi~ 543 (543)
T 2ong_A 495 DS-PFGKDFIGCAVDLGRMAQLMYHNGDGHGTQHPIIHQQMTRTLFEPFA 543 (543)
T ss_dssp SC-SSCHHHHHHHHHHHHHHHHHTSSCSTTSSSCTTHHHHHHHHHTSCC-
T ss_pred CC-CCCHHHHHHHHHHHHeehhheeCCCCCCCccHHHHHHHHHHhccCCC
Confidence 87 89999999999999999999999999999977899999999999996
No 6
>3sdr_A Alpha-bisabolene synthase; lyase, terpene synthase; HET: 210; 1.86A {Abies grandis} PDB: 3sdq_A 3sae_A* 3sdt_A* 3sdu_A* 3sdv_A*
Probab=100.00 E-value=3.4e-40 Score=300.81 Aligned_cols=127 Identities=28% Similarity=0.440 Sum_probs=115.7
Q ss_pred Ccccccc--cCCchhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhhhh
Q 045966 1 KELEFLE--SNNIPDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHET-GVSEELAREHIKDLMRQMWKKVNAYR 77 (145)
Q Consensus 1 e~~ew~~--~~~~p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~-gvSeEeA~~~i~~lie~~wK~lN~e~ 77 (145)
|+|+|+. ++ |+|++++++|+||+|||+||++|++||+++|+|+|||||| |+|+|+|+++++++|+++||+||+++
T Consensus 688 e~~e~~~~~s~--p~l~~~~~~I~RL~NDi~S~k~E~~rG~~assV~cYMke~~gvS~EeA~~~i~~~Ie~~wKeln~e~ 765 (817)
T 3sdr_A 688 EALEKVDYPGR--RVLTELNSLISRLADDTKTYKAEKARGELASSIECYMKDHPECTEEEALDHIYSILEPAVKELTREF 765 (817)
T ss_dssp HHHHTTCCTTS--CSHHHHHHHHHHHHHHHHSSCC------CCCHHHHHHHHSTTSCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhcccccch--HHHHHHHHHHHHHhccchHHHHHHhcCCcchHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4688987 56 7999999999999999999999999999999999999999 79999999999999999999999999
Q ss_pred hcCCCCCcHHHHHHHHHHhhhhhhccccCCCCCCCchhHHHHHHhhccccccC
Q 045966 78 ANKDSPLSQTTADFMLNLVRASHFMYLHGDGHGVQNQETMDVAFTLLFRPIPL 130 (145)
Q Consensus 78 l~~~~~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t~~~~~~k~~I~sll~~Pi~i 130 (145)
++++ ++|++|+++++|+||++++||+++||||.|+.+||++|++||++|||+
T Consensus 766 l~~~-~~p~~~~~~~ln~aR~~~~~Y~~~Dg~t~~~~~~k~~i~~ll~~pi~l 817 (817)
T 3sdr_A 766 LKPD-DVPFACKKMLFEETRVTMVIFKDGDGFGVSKLEVKDHIKECLIEPLPL 817 (817)
T ss_dssp HSCC-SSCHHHHHHHHHHHHHHHHHTCSCCSSCCCHHHHHHHHHHHHTCCCCC
T ss_pred hCCC-CCCHHHHHHHHHHHHHHHHHhcCCCCCCCchHHHHHHHHHHhcCCCCC
Confidence 9987 899999999999999999999999999998778999999999999985
No 7
>3p5p_A Taxadiene synthase; class I and II terpene cyclase fold, diterpene cyclase, DDXX NSE/DTE motif, 3-azacopalyl diphosphate; HET: A3C; 1.82A {Taxus brevifolia} PDB: 3p5r_A*
Probab=100.00 E-value=3.8e-40 Score=298.87 Aligned_cols=129 Identities=25% Similarity=0.373 Sum_probs=115.7
Q ss_pred CcccccccCCchhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhhhhhc
Q 045966 1 KELEFLESNNIPDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHET-GVSEELAREHIKDLMRQMWKKVNAYRAN 79 (145)
Q Consensus 1 e~~ew~~~~~~p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~-gvSeEeA~~~i~~lie~~wK~lN~e~l~ 79 (145)
|+|+|+..+ |+|+++++.|+||+|||+||++|++||+++|+|+|||||| |+|+|+|+++++++|+++||+||+++++
T Consensus 628 e~~e~~~~~--~~l~~~~~~I~RL~NDi~S~k~E~~rG~~as~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l~ 705 (764)
T 3p5p_A 628 DVVEKVHYP--SNMFELVSLSWRLTNDTKTYQAEKARGQQASGIACYMKDNPGATEEDAIKHICRVVDRALKEASFEYFK 705 (764)
T ss_dssp GGHHHHSTT--SHHHHHHHHHHHHHHHHHHHHHHHTTTCCCSHHHHHHHHSTTCCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHhhhhhh--HHHHHHHHHHHHhhhcccchHHHHhcCCcchHHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 478999988 9999999999999999999999999999999999999999 7999999999999999999999999997
Q ss_pred -CCCCCcHHHHHHHHHHhhhhhhccccCCCCCCCchhHHHHHHhhccccccCCC
Q 045966 80 -KDSPLSQTTADFMLNLVRASHFMYLHGDGHGVQNQETMDVAFTLLFRPIPLED 132 (145)
Q Consensus 80 -~~~~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t~~~~~~k~~I~sll~~Pi~i~~ 132 (145)
++ ++|++|+++++|+||++++||+++||||.|+.+||++|++||++||++..
T Consensus 706 ~~~-~~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~~~k~~i~~ll~~Pi~~~~ 758 (764)
T 3p5p_A 706 PSN-DIPMGCKSFIFNLRLCVQIFYKFIDGYGIANEEIKDYIRKVYIDPIQVGS 758 (764)
T ss_dssp CCS-SSCHHHHHHHHHTHHHHHHHSCC-------CCCHHHHHHHHHTCCCCC--
T ss_pred CCC-CCCHHHHHHHHHHHHHHHHHhcCCCCCCCCcHHHHHHHHHHHhcCCccCc
Confidence 66 89999999999999999999999999999866799999999999999854
No 8
>2j5c_A 1,8-cineole synthase; terpene synthases, 1, monoterpene, lyase; 1.95A {Salvia fruticosa}
Probab=100.00 E-value=6.6e-40 Score=289.53 Aligned_cols=125 Identities=40% Similarity=0.627 Sum_probs=104.5
Q ss_pred CcccccccCCchhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhhhcC
Q 045966 1 KELEFLESNNIPDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYRANK 80 (145)
Q Consensus 1 e~~ew~~~~~~p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~l~~ 80 (145)
++|+|+.++ |++++++++|+||+|||+||++|++||+++|+|+|||||+|+|+|+|+++++++|+++||+||+++++
T Consensus 444 e~~e~l~~~--p~i~~~~~~i~RL~NDI~S~~~E~~rG~v~s~V~cyMke~g~s~eeA~~~i~~~ie~~wk~ln~e~l~- 520 (569)
T 2j5c_A 444 EAAESMHKY--HDIVRASCTILRLADDMGTSLDEVERGDVPKSVQCYMNEKNASEEEAREHVRSLIDQTWKMMNKEMMT- 520 (569)
T ss_dssp HHHHHHTTT--CHHHHHHHHHHHHHHHHHC----------CCHHHHC------CCHHHHHHHHHHHHHHHHHHHHHHHH-
T ss_pred HHHHHhhcc--HHHHHHHHHHHHHhcccchhhhhcccCCccHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 368999999 99999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCCCcHHHHHHHHHHhhhhhhccccC-CCCCCCchhHHHHHHhhcccccc
Q 045966 81 DSPLSQTTADFMLNLVRASHFMYLHG-DGHGVQNQETMDVAFTLLFRPIP 129 (145)
Q Consensus 81 ~~~vp~~~~~~~~N~aR~~~~~Y~~~-Dg~t~~~~~~k~~I~sll~~Pi~ 129 (145)
+ ++|++|+++++|+||+++++|+++ ||||.|+.++|++|++||++|||
T Consensus 521 ~-~vp~~~~~~~~nlaR~~~~~Y~~~~Dg~t~~~~~~k~~i~~ll~~pi~ 569 (569)
T 2j5c_A 521 S-SFSKYFVEVSANLARMAQWIYQHESDGFGMQHSLVNKMLRDLLFHRYE 569 (569)
T ss_dssp C-CSCHHHHHHHHHHHHHHHHHTGGGSCTTC-CCCHHHHHHHHHHTSCCC
T ss_pred c-CCCHHHHHHHHHHHheeehhccCCCcCCCCchHHHHHHHHHHhccCCC
Confidence 7 899999999999999999999999 99999977899999999999996
No 9
>3s9v_A Abietadiene synthase, chloroplastic; alpha bundle/barrel, lyase, isomerase; 2.30A {Abies grandis}
Probab=100.00 E-value=9.6e-39 Score=290.33 Aligned_cols=124 Identities=25% Similarity=0.423 Sum_probs=115.4
Q ss_pred CcccccccCCchhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhhhhhc
Q 045966 1 KELEFLESNNIPDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHET-GVSEELAREHIKDLMRQMWKKVNAYRAN 79 (145)
Q Consensus 1 e~~ew~~~~~~p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~-gvSeEeA~~~i~~lie~~wK~lN~e~l~ 79 (145)
|+|+|+..+ |+|+++++.|+||+|||+||++|++||+++|+|+|||||| |+|+|+|+++++++|+++||+||+++++
T Consensus 659 e~~e~~~~~--~~l~~~~~~I~RL~NDi~S~k~E~~rG~~as~V~cYMke~~gvSeEeA~~~i~~~Ie~~wKeln~e~l~ 736 (785)
T 3s9v_A 659 EVLSKIDRE--SRFLQLMGLTGRLVNDTKTYQAERGQGEVASAIQCYMKDHPKISEEEALQHVYSVMENALEELNREFVN 736 (785)
T ss_dssp HHHTTTSTT--SHHHHHHHHHHHHHHHHHHHHHHHHHSCCCSHHHHHHHHCTTSCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccc--HHHHHHHHHHHHHhcccchhhHHHhcCCcchHHHHHHHhCCCCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 468999988 9999999999999999999999999999999999999999 8999999999999999999999999998
Q ss_pred CCCCCcHHHHHHHHHHhhhhhhccccCCCCCCCch-hHHHHHHhhccccc
Q 045966 80 KDSPLSQTTADFMLNLVRASHFMYLHGDGHGVQNQ-ETMDVAFTLLFRPI 128 (145)
Q Consensus 80 ~~~~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t~~~~-~~k~~I~sll~~Pi 128 (145)
++ +|++|+++++|+||++++||+++||||.|+. +||++|++||++||
T Consensus 737 ~~--~p~~~~~~~~n~aR~~~~~Y~~~Dg~t~~~~~~~k~~i~~ll~~Pi 784 (785)
T 3s9v_A 737 NK--IPDIYKRLVFETARIMQLFYMQGDGLTLSHDMEIKEHVKNCLFQPV 784 (785)
T ss_dssp SC--CCHHHHHHHHHHHHHHHHHTCCCC----CHHHHHHHHHHHHHTSCC
T ss_pred CC--CCHHHHHHHHHHHHHHHHHhcCCCCCCCCChHHHHHHHHHHhcccC
Confidence 54 9999999999999999999999999999865 69999999999998
No 10
>1ps1_A Pentalenene synthase; antibiotic biosynthesis, sesquiterpene cyclase, lyase; 2.60A {Streptomyces SP} SCOP: a.128.1.4 PDB: 1hm7_A 1hm4_A
Probab=99.76 E-value=3.6e-19 Score=145.61 Aligned_cols=72 Identities=15% Similarity=0.192 Sum_probs=67.4
Q ss_pred cccccCCch---hHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 045966 4 EFLESNNIP---DIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYR 77 (145)
Q Consensus 4 ew~~~~~~p---~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~ 77 (145)
+|+.+. | +|+++++.++||+|||.||++|+++|+++|+|+|||+++|+|+|+|+++++++|+++||++|++.
T Consensus 196 ~~~~~~--p~~~~l~~~~~~i~rL~NDl~S~~kE~~~G~~~n~V~~~m~~~g~s~eeA~~~v~~~i~~~~~~~~~~~ 270 (337)
T 1ps1_A 196 HRVFDS--AVMSAMLQIAVDVNLLLNDIASLEKEEARGEQNNMVMILRREHGWSKSRSVSHMQNEVRARLEQYLLLE 270 (337)
T ss_dssp HHHHTS--HHHHHHHHHHHHHHHHHHHHHTHHHHHHTTCCCSHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHhC--hHHHHHHHHHHHHHHHHHHHhhHHHHHhcCCcchHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 455545 5 79999999999999999999999999999999999999999999999999999999999999987
No 11
>1di1_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid biosynthesis, lyase; 2.50A {Penicillium roqueforti} SCOP: a.128.1.4 PDB: 1dgp_A
Probab=99.70 E-value=7.5e-18 Score=135.40 Aligned_cols=66 Identities=8% Similarity=0.084 Sum_probs=62.3
Q ss_pred hhHHHHHHHHHHhhcCcccchhhhccCC--------chhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 045966 12 PDIIQWSSKIFRLQDDLGTSTDELKRGD--------VWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYR 77 (145)
Q Consensus 12 p~l~~~~~~i~RL~NDi~t~~~E~~rG~--------~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~ 77 (145)
++|+++++.++||+|||.||++|+++|+ ++|+|+|||+++|+|+|+|+++++++|++.||++|+..
T Consensus 191 ~~l~~~~~~~~~l~NDl~S~~kE~~~g~~~h~~~~~~~n~V~~~m~~~g~s~eeA~~~~~~~i~~~~~~~~~~~ 264 (300)
T 1di1_A 191 KALEANCAKQLSVVNDIYSYDKEEEASRTGHKEGAFLCSAVKVLAEESKLGIPATKRVLWSMTREWETVHDEIV 264 (300)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCCC----------CCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhhhHHHHHHHHhhccccccccccchhHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999999 88999999999999999999999999999999999865
No 12
>3kb9_A EPI-isozizaene synthase; terpenoid cyclase, alpha-helical fold, farnesyl diphosphate, metal-binding, lyase, magnesium; HET: BTM; 1.60A {Streptomyces coelicolor} PDB: 3kbk_A 3lgk_A 3lg5_A*
Probab=99.69 E-value=1.5e-17 Score=139.68 Aligned_cols=65 Identities=12% Similarity=0.072 Sum_probs=62.8
Q ss_pred hhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 045966 12 PDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAY 76 (145)
Q Consensus 12 p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e 76 (145)
++|+++++.++||+|||.||++|+++|+++|+|+|||+++|+|+|+|+++++++|++.||++|+.
T Consensus 247 ~~l~~~~~~i~rL~NDi~S~~kE~~~G~~~N~V~~~m~~~g~s~eeA~~~v~~~i~~~~k~~~~~ 311 (382)
T 3kb9_A 247 RRAALLSQEFAAWYNDLCSLPKEIAGDEVHNLGISLITHHSLTLEEAIGEVRRRVEECITEFLAV 311 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSHHHHHHHHSCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 55899999999999999999999999999999999999999999999999999999999999984
No 13
>3bny_A Aristolochene synthase; sesquiterpene cyclase, isoprenoid, farnesyl diphosphate, magnesium, cyclization, lyase; HET: FPF; 1.89A {Aspergillus terreus} PDB: 2e4o_A 2oa6_A* 3bnx_A* 3cke_A*
Probab=99.64 E-value=1.2e-16 Score=129.79 Aligned_cols=66 Identities=20% Similarity=0.177 Sum_probs=61.0
Q ss_pred hhHHHHHHHHHHhhcCcccchhhhccCC--------chhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhh
Q 045966 12 PDIIQWSSKIFRLQDDLGTSTDELKRGD--------VWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYR 77 (145)
Q Consensus 12 p~l~~~~~~i~RL~NDi~t~~~E~~rG~--------~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~ 77 (145)
++|+++++.++||+|||.||++|+++|+ ++|+|+|||+++|+|+|+|+++++++|++.|+++|+..
T Consensus 205 ~~l~~~~~~~~~L~NDl~S~~kE~~~g~~~~~~~~~~~N~V~~~m~~~g~s~eeA~~~~~~~i~~~~~~~~~l~ 278 (320)
T 3bny_A 205 REIDANCSKHLSVVNDIYSYEKELYTSKTAHSEGGILCTSVQILAQEADVTAEAAKRVLFVMCREWELRHQLLV 278 (320)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCC-----------CCSHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccchhHHHHHhhcccccccccccchHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999999999999999999999998 78999999999999999999999999999999999855
No 14
>3v1v_A 2-MIB synthase, 2-methylisoborneol synthase; class I terpenoid cyclase fold, DDXXXXD motif, NDXXSXXXE MOT methylisoborneol biosynthesis; HET: GST; 1.80A {Streptomyces coelicolor} PDB: 3v1x_A*
Probab=99.52 E-value=8.2e-15 Score=125.71 Aligned_cols=72 Identities=17% Similarity=0.151 Sum_probs=64.5
Q ss_pred ccccccCCch---hHHHHHHHHHHhhcCcccchhhhcc-CCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhh
Q 045966 3 LEFLESNNIP---DIIQWSSKIFRLQDDLGTSTDELKR-GDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAY 76 (145)
Q Consensus 3 ~ew~~~~~~p---~l~~~~~~i~RL~NDi~t~~~E~~r-G~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e 76 (145)
.+|+.+. | +|+++++.++||+|||.||++|+++ |++.|+|+|||+++|+|+|+|++++++++++.+++..+.
T Consensus 314 p~~v~~~--p~~~~L~~~~~~i~rL~NDI~Sy~kE~~~gg~~~N~V~~~mke~g~S~eeA~~~v~~~i~~~~~~F~~~ 389 (433)
T 3v1v_A 314 PADLHAR--PDMQRVIALAGNATTIVNDLYSYTKELNSPGRHLNLPVVIAEREQLCERDAYLKAVEVHNELQHSFEAA 389 (433)
T ss_dssp CHHHHTS--HHHHHHHHHHHHHHHHHHHHHSHHHHTTSSSCCCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHhC--chHHHHHHHHHHHHHHhchHHHHHHHHhcCCCCCcHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4566655 5 4799999999999999999999999 578899999999999999999999999999999987664
No 15
>3pya_A ENT-copalyl diphosphate synthase, chloroplastic; class I and II terpene cyclase fold, class II diterpene CYCL DXXDD motif; HET: AG8 1PE; 2.25A {Arabidopsis thaliana} PDB: 3pyb_A*
Probab=99.37 E-value=1.8e-13 Score=123.75 Aligned_cols=86 Identities=9% Similarity=0.092 Sum_probs=72.2
Q ss_pred hhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhhhcCCC-CCcHHHHH
Q 045966 12 PDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYRANKDS-PLSQTTAD 90 (145)
Q Consensus 12 p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~l~~~~-~vp~~~~~ 90 (145)
.+|+++++.||||+||+++|++|+ .+++++.||..|++|++.++++++ .+|++|
T Consensus 634 ~~L~~ltn~icrllndl~~~~~E~-----------------------~~~~~~~IE~~mqEL~~lVl~~~~~~ip~~~-- 688 (727)
T 3pya_A 634 VRLAEIINRICLPRQYLKARRNDE-----------------------KEKTIKSMEKEMGKMVELALSESDTFRDVSI-- 688 (727)
T ss_dssp HHHHHHHHHHSCCCC------CHH-----------------------HHHHHHHHHHHHHHHHHHHHSCCTTTHHHHH--
T ss_pred HHHHHHHHHHhHHHhHHHHHHHHH-----------------------HHHHHHHHHHHHHHHHHHHhccCCCCCCCcc--
Confidence 349999999999999999999977 568999999999999999998653 799999
Q ss_pred HHHHHhhhhhhccccCCCCCCCchhHHHHHHhhcccccc
Q 045966 91 FMLNLVRASHFMYLHGDGHGVQNQETMDVAFTLLFRPIP 129 (145)
Q Consensus 91 ~~~N~aR~~~~~Y~~~Dg~t~~~~~~k~~I~sll~~Pi~ 129 (145)
|+.++++.||.. ||++| + |..||.++|++|+-
T Consensus 689 ---tf~~V~ksFYy~--ay~~p-~-i~~hI~kVl~~~~~ 720 (727)
T 3pya_A 689 ---TFLDVAKAFYYF--ALCGD-H-LQTHISKVLFQKVG 720 (727)
T ss_dssp ---HHHHHHHHHHHH--HHHTT-S-CHHHHHHHHHSCCC
T ss_pred ---cHHHHHHHHHhh--hcCCH-H-HHHHHHHHHcCccc
Confidence 899999999986 99998 5 99999999999985
No 16
>1yyq_A Trichodiene synthase; terpenoid cyclase fold, site-directed mutant, pyrophosphate, lyase; 2.10A {Fusarium sporotrichioides} PDB: 1yj4_A 1yyr_A* 1yys_A* 1jfa_A 1jfg_A 2q9y_A* 2q9z_A 2ael_A* 2aek_A* 2aet_A 2ps7_A 2ps8_A 1kiy_A 1kiz_A 1yyt_A* 1yyu_A* 2ps5_A 2ps4_A 2ps6_A
Probab=95.97 E-value=0.0073 Score=50.63 Aligned_cols=84 Identities=15% Similarity=0.075 Sum_probs=63.8
Q ss_pred hhHHHHHHHHHHhhcCcccchhhhcc-CCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCcHHHHH
Q 045966 12 PDIIQWSSKIFRLQDDLGTSTDELKR-GDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYRANKDSPLSQTTAD 90 (145)
Q Consensus 12 p~l~~~~~~i~RL~NDi~t~~~E~~r-G~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~l~~~~~vp~~~~~ 90 (145)
...+..+..+.=++|||-||.+|... |+..|.|..++.++|.|.++|.+++..++...-.++-+ .+.+. .|. +++
T Consensus 211 ~~~i~am~~~i~~~NDIlSf~KE~~~~Gd~~NlV~vl~~~~g~S~~eAl~~v~~~~~~~~~r~~~-~L~~~--~~~-~l~ 286 (374)
T 1yyq_A 211 TSAIAQMENWMVWVNDLMSFYKEFDDERDQISLVKNYVVSDEISLHEALEKLTQDTLHSSKQMVA-VFSDK--DPQ-VMD 286 (374)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTTCSSCCCCHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHH-HHSSS--CHH-HHH
T ss_pred HHHHHHHHHHHHhhhhhhccchhhhccCCccchhhhehhcCCCCHHHHHHHHHHHHHHHHHHHHH-HhccC--CHH-HHH
Confidence 34566666677789999999999974 99999999999999999999999999999888877755 44322 332 445
Q ss_pred HHHHHhhhh
Q 045966 91 FMLNLVRAS 99 (145)
Q Consensus 91 ~~~N~aR~~ 99 (145)
.+-+..|.-
T Consensus 287 al~~~irG~ 295 (374)
T 1yyq_A 287 TIECFMHGY 295 (374)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHhHh
Confidence 544555543
No 17
>3fau_A NEDD4-binding protein 2; SMR, small-MUTS related domain, nicking endonuclease, alternative splicing, ATP-binding, coiled coil, cytoplasm, hydrolase; 1.90A {Homo sapiens} SCOP: d.68.8.1
Probab=66.32 E-value=6 Score=25.35 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=20.4
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHH
Q 045966 51 TGVSEELAREHIKDLMRQMWKKV 73 (145)
Q Consensus 51 ~gvSeEeA~~~i~~lie~~wK~l 73 (145)
||.+.+||+..+...+++++...
T Consensus 6 HGl~v~eA~~~l~~~l~~~~~~~ 28 (82)
T 3fau_A 6 HGLHVDEALEHLMRVLEKKTEEF 28 (82)
T ss_dssp TTSCHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHHHh
Confidence 69999999999999999988643
No 18
>1ngm_B Transcription factor IIIB BRF1 subunit; TFIIIB, TBP, TAF, protein-DNA complex, transcription/DNA complex; 2.95A {Saccharomyces cerevisiae} SCOP: j.104.1.1
Probab=65.80 E-value=3.7 Score=26.67 Aligned_cols=28 Identities=21% Similarity=0.395 Sum_probs=22.0
Q ss_pred HHHHHHhcCCCCHHHHHHHHHHHHHHHHHHHhhhhhc
Q 045966 43 SIQCYMHETGVSEELAREHIKDLMRQMWKKVNAYRAN 79 (145)
Q Consensus 43 sV~cYMke~gvSeEeA~~~i~~lie~~wK~lN~e~l~ 79 (145)
=|.||+ .|+|||. +-+.-|..+|++|+.
T Consensus 35 Eid~yi----LteeEv~-----~K~~iW~~~N~dyL~ 62 (72)
T 1ngm_B 35 ELNAHL----LNEEASK-----LKERIWIGLNADFLL 62 (72)
T ss_dssp SGGGSS----CCHHHHH-----HHHHHHHHHTTTHHH
T ss_pred HHHHhh----CCHHHHH-----HHHHHHHHHhHHHHH
Confidence 356666 6999986 556789999999985
No 19
>4akk_A Nitrate regulatory protein; transcription; 2.14A {Klebsiella oxytoca}
Probab=50.03 E-value=9 Score=31.96 Aligned_cols=52 Identities=21% Similarity=0.270 Sum_probs=36.5
Q ss_pred HHHHHhhcCcccchhhh-ccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHH
Q 045966 19 SKIFRLQDDLGTSTDEL-KRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMW 70 (145)
Q Consensus 19 ~~i~RL~NDi~t~~~E~-~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~w 70 (145)
..+-+|-+.+..-+... .|.-+..+.-+.|+.+|+||++|.+.|++.--+..
T Consensus 348 ~~~~~l~~~~~~l~~~l~~r~~i~~Akg~lm~~~~~~e~~A~~~l~~~sm~~~ 400 (423)
T 4akk_A 348 HELQQLSGQLASLKDALEERKLIEKAKSVLMTYQGMQEEQAWQALRKMAMDKN 400 (423)
T ss_dssp HHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhhhHHHHHHHHHHHhhCcCHHHHHHHHHHHHHHcC
Confidence 33444555555544442 45567778889999999999999999998755544
No 20
>2d9i_A NEDD4-binding protein 2; SMR domain, N4BP2, BCL-3 binding protein, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.68.8.1
Probab=48.84 E-value=16 Score=23.97 Aligned_cols=22 Identities=18% Similarity=0.256 Sum_probs=19.3
Q ss_pred cCCCCHHHHHHHHHHHHHHHHH
Q 045966 50 ETGVSEELAREHIKDLMRQMWK 71 (145)
Q Consensus 50 e~gvSeEeA~~~i~~lie~~wK 71 (145)
=||.+.+||+..+...+++++.
T Consensus 13 LHGl~v~eA~~~L~~~L~~~~~ 34 (96)
T 2d9i_A 13 LHGLHVDEALEHLMRVLEKKTE 34 (96)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHHHHHHHHHHH
Confidence 3699999999999999998764
No 21
>2zqe_A MUTS2 protein; alpha/beta, ATP-binding, DNA-binding, nucleotide-binding, DN protein; 1.70A {Thermus thermophilus}
Probab=47.90 E-value=19 Score=23.25 Aligned_cols=22 Identities=9% Similarity=0.096 Sum_probs=19.1
Q ss_pred CCCCHHHHHHHHHHHHHHHHHH
Q 045966 51 TGVSEELAREHIKDLMRQMWKK 72 (145)
Q Consensus 51 ~gvSeEeA~~~i~~lie~~wK~ 72 (145)
||.+.|||+..+...++++...
T Consensus 10 hG~~~~eA~~~l~~fl~~a~~~ 31 (83)
T 2zqe_A 10 RGLTVAEALLEVDQALEEARAL 31 (83)
T ss_dssp TTCCHHHHHHHHHHHHHHHHHT
T ss_pred CCCCHHHHHHHHHHHHHHHHHC
Confidence 5899999999999999888743
No 22
>1xri_A AT1G05000; structural genomics, protein structure initiative, CESG for eukaryotic structural genomics, phosphoprote phosphatase; 3.30A {Arabidopsis thaliana} SCOP: c.45.1.1 PDB: 2q47_A
Probab=47.11 E-value=12 Score=25.69 Aligned_cols=28 Identities=4% Similarity=-0.091 Sum_probs=22.7
Q ss_pred CCchhHHHHHHhcCCCCHHHHHHHHHHH
Q 045966 38 GDVWKSIQCYMHETGVSEELAREHIKDL 65 (145)
Q Consensus 38 G~~~ssV~cYMke~gvSeEeA~~~i~~l 65 (145)
|-.+..+-|||+..|+|.++|.+.++..
T Consensus 104 ~RTg~~~a~~l~~~g~~~~~a~~~~~~~ 131 (151)
T 1xri_A 104 HRTGCLVGCLRKLQKWCLTSIFDEYQRF 131 (151)
T ss_dssp SHHHHHHHHHHHHTTBCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHh
Confidence 3456777899998899999999887654
No 23
>1tr8_A Conserved protein (MTH177); chaperones, nascent polypeptide-associated complex, ribosome domain, ubiquitin, chaperone; 2.27A {Methanothermobacter marburgensis}
Probab=42.15 E-value=15 Score=25.00 Aligned_cols=27 Identities=26% Similarity=0.259 Sum_probs=22.4
Q ss_pred CCchhHHHHHHhcCCCCHHHHHHHHHH
Q 045966 38 GDVWKSIQCYMHETGVSEELAREHIKD 64 (145)
Q Consensus 38 G~~~ssV~cYMke~gvSeEeA~~~i~~ 64 (145)
|-...-|+.-|.|.|+|.++|++.+++
T Consensus 63 ~i~~edi~lv~~q~~vs~~~A~~aL~~ 89 (102)
T 1tr8_A 63 EIPEDDIELVMNQTGASREDATRALQE 89 (102)
T ss_dssp CCCHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 445577899999999999999988764
No 24
>3rz2_A Protein tyrosine phosphatase type IVA 1; tyrosine phosphatase, dual specific phosphatase, COMP with peptide, hydrolase; 2.80A {Rattus norvegicus} PDB: 1x24_A 1zcl_A
Probab=41.62 E-value=19 Score=25.95 Aligned_cols=28 Identities=21% Similarity=0.151 Sum_probs=22.4
Q ss_pred cCCchhHHHHHHhcCCCCHHHHHHHHHH
Q 045966 37 RGDVWKSIQCYMHETGVSEELAREHIKD 64 (145)
Q Consensus 37 rG~~~ssV~cYMke~gvSeEeA~~~i~~ 64 (145)
.|-.+..+-||+-..|++.++|++.++.
T Consensus 128 ~gRSg~~va~~L~~~g~~~~~a~~~vr~ 155 (189)
T 3rz2_A 128 LGRAPVLVALALIEGGMKYEDAVQFIRQ 155 (189)
T ss_dssp STTHHHHHHHHHHTTTCCHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 4567788899999889999999876654
No 25
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics, medical structural genomics of pathogen protozoa, MSGPP, unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Probab=39.96 E-value=21 Score=24.57 Aligned_cols=27 Identities=22% Similarity=0.071 Sum_probs=21.9
Q ss_pred CCchhHHHHHHhcC-CCCHHHHHHHHHH
Q 045966 38 GDVWKSIQCYMHET-GVSEELAREHIKD 64 (145)
Q Consensus 38 G~~~ssV~cYMke~-gvSeEeA~~~i~~ 64 (145)
|-.+..+-||+-.. |++.++|++.+++
T Consensus 121 ~RTg~~~a~~L~~~~~~~~~~a~~~vr~ 148 (167)
T 3s4o_A 121 GRAPILVALALVEYGNVSALDAIALIRE 148 (167)
T ss_dssp SHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCHHHHHHHHHH
Confidence 44677788898777 9999999988764
No 26
>1wy6_A Hypothetical protein ST1625; helical repeat protein, structural genomics, unknown function; 2.20A {Sulfolobus tokodaii} SCOP: a.118.20.1
Probab=39.62 E-value=38 Score=25.12 Aligned_cols=44 Identities=18% Similarity=0.297 Sum_probs=34.8
Q ss_pred HHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCH--HHHHHHH
Q 045966 19 SKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSE--ELAREHI 62 (145)
Q Consensus 19 ~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSe--EeA~~~i 62 (145)
..+.-.+|+|+++-+=..=|.+-+.|+||++-+-.|| .-|...+
T Consensus 56 ~y~v~vLd~IGkiFDis~C~NlKrVi~C~~~~n~~se~vd~ALd~l 101 (172)
T 1wy6_A 56 RYMFQVLDKIGSYFDLDKCQNLKSVVECGVINNTLNEHVNKALDIL 101 (172)
T ss_dssp HHHHHHHHHHGGGSCGGGCSCTHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred hHHHHHHHHHhhhcCcHhhhcHHHHHHHHHHhcchHHHHHHHHHHH
Confidence 3556778999998877778999999999999888887 4465543
No 27
>3qd7_X Uncharacterized protein YDAL; alpha/beta/alpha fold, endonuclease, hydrolase; 2.30A {Escherichia coli}
Probab=36.76 E-value=32 Score=24.41 Aligned_cols=36 Identities=17% Similarity=0.154 Sum_probs=26.5
Q ss_pred hccCCchhHHHHHHhcCCCCHHHHHHHHHHHHHHHHHH
Q 045966 35 LKRGDVWKSIQCYMHETGVSEELAREHIKDLMRQMWKK 72 (145)
Q Consensus 35 ~~rG~~~ssV~cYMke~gvSeEeA~~~i~~lie~~wK~ 72 (145)
..+|+.+ ++--+-=||.+.+||+..+...|.++...
T Consensus 39 Lr~G~~~--~~~~LDLHG~~~~EA~~~L~~fL~~a~~~ 74 (137)
T 3qd7_X 39 LRSGKYP--QQASLNLLRQPVEECRKMVFSFIQQALAD 74 (137)
T ss_dssp HHSCCCC--GGGEEECTTCCHHHHHHHHHHHHHHHHHT
T ss_pred HHCCCCC--CCeEEECCCCCHHHHHHHHHHHHHHHHHC
Confidence 3566642 34444457999999999999999988754
No 28
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine phosphatase IVA1...; structural genomics, NYSGXRC, unknown function, PSI; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Probab=34.76 E-value=29 Score=23.60 Aligned_cols=28 Identities=21% Similarity=0.152 Sum_probs=22.0
Q ss_pred CCchhHHHHHHhcCCCCHHHHHHHHHHH
Q 045966 38 GDVWKSIQCYMHETGVSEELAREHIKDL 65 (145)
Q Consensus 38 G~~~ssV~cYMke~gvSeEeA~~~i~~l 65 (145)
|-.+..+-+|+-..|++.++|.+.+++.
T Consensus 108 ~Rtg~~~a~~l~~~~~~~~~a~~~vr~~ 135 (159)
T 1rxd_A 108 GRAPVLVALALIEGGMKYEDAVQFIRQK 135 (159)
T ss_dssp TTHHHHHHHHHHHTTCCHHHHHHHHHTT
T ss_pred CHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 5567778888888899999998777543
No 29
>1yn9_A BVP, polynucleotide 5'-phosphatase; RNA triphosphatase, cysteine phosphatase, P-loop, hydrolase; HET: PO4; 1.50A {Autographa californicanucleopolyhedrovirus}
Probab=32.19 E-value=18 Score=25.53 Aligned_cols=27 Identities=11% Similarity=0.183 Sum_probs=21.4
Q ss_pred CCchhHHHHHHhc-CCCCHHHHHHHHHH
Q 045966 38 GDVWKSIQCYMHE-TGVSEELAREHIKD 64 (145)
Q Consensus 38 G~~~ssV~cYMke-~gvSeEeA~~~i~~ 64 (145)
|-.+..+-||+-. .|+|.++|++.++.
T Consensus 125 ~RTg~~va~~L~~~~~~~~~~a~~~~r~ 152 (169)
T 1yn9_A 125 NRTGYMVCRYLMHTLGIAPQEAIDRFEK 152 (169)
T ss_dssp HHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 3456778899987 59999999988764
No 30
>3ic3_A Putative pyruvate dehydrogenase; structur genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE BGC; 1.80A {Rhodopseudomonas palustris}
Probab=29.54 E-value=67 Score=21.96 Aligned_cols=37 Identities=22% Similarity=0.228 Sum_probs=27.5
Q ss_pred HHHHHhhcCcccchhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHHH
Q 045966 19 SKIFRLQDDLGTSTDELKRGDVWKSIQCYMHETGVSEELAREHIKDLM 66 (145)
Q Consensus 19 ~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~li 66 (145)
..-|||+=||+- |.+ ..|-+++|+|+++|++.|.+.-
T Consensus 47 ~~WG~lLaDlar--------HaA---~a~a~~~~~s~~eal~rI~egF 83 (101)
T 3ic3_A 47 EMWGLLLVDIAR--------HAA---RSYARESEYTEDEALERIVEMF 83 (101)
T ss_dssp HHHHHHHHHHHH--------HHH---HHHHHTSSCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH--------HHH---HHHHHhcCCCHHHHHHHHHHHH
Confidence 456888888874 333 4566899999999998886654
No 31
>3hdf_A Lysozyme; antimicrobial, bacteriolytic enzyme, glycosid hydrolase, late protein; 1.70A {Enterobacteria phage P21}
Probab=28.89 E-value=1.5e+02 Score=20.65 Aligned_cols=41 Identities=7% Similarity=0.189 Sum_probs=30.2
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCcHHHHHHHHHH
Q 045966 52 GVSEELAREHIKDLMRQMWKKVNAYRANKDSPLSQTTADFMLNL 95 (145)
Q Consensus 52 gvSeEeA~~~i~~lie~~wK~lN~e~l~~~~~vp~~~~~~~~N~ 95 (145)
.+|+++|.+-++.-+...-+.+++.+ . . ++++.-.++.+.+
T Consensus 40 ~iT~~ea~~ll~~dl~~~~~~v~~~v-~-~-~l~q~q~dALvSf 80 (140)
T 3hdf_A 40 TYTKAECKALLNKDLATVARQINPYI-K-V-DIPETMRGALYSF 80 (140)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHGGGC-C-S-CCCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhc-c-c-cCCHHHHHHHHHH
Confidence 58999999999999999998888743 2 3 5776544444443
No 32
>3s4e_A Dual specificity protein phosphatase 19; PTP, protein tyrosine phosphatase, hydrolase; 1.26A {Homo sapiens}
Probab=28.60 E-value=32 Score=23.40 Aligned_cols=27 Identities=11% Similarity=0.009 Sum_probs=20.1
Q ss_pred CchhHHHHHHhc-CCCCHHHHHHHHHHH
Q 045966 39 DVWKSIQCYMHE-TGVSEELAREHIKDL 65 (145)
Q Consensus 39 ~~~ssV~cYMke-~gvSeEeA~~~i~~l 65 (145)
-.++.+-+|+-. .|+|.++|.+.+++.
T Consensus 94 RS~~~v~ayLm~~~~~~~~~A~~~v~~~ 121 (144)
T 3s4e_A 94 RAAAIVIGFLMNSEQTSFTSAFSLVKNA 121 (144)
T ss_dssp HHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 345666777754 599999999888764
No 33
>3ezz_A Dual specificity protein phosphatase 4; alpha/beta, hydrolase, nucleus; 2.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1m3g_A
Probab=27.88 E-value=25 Score=23.89 Aligned_cols=26 Identities=23% Similarity=0.114 Sum_probs=19.5
Q ss_pred CchhHHHHHHhc-CCCCHHHHHHHHHH
Q 045966 39 DVWKSIQCYMHE-TGVSEELAREHIKD 64 (145)
Q Consensus 39 ~~~ssV~cYMke-~gvSeEeA~~~i~~ 64 (145)
-.++.+-+|+-. .|+|.++|.+++++
T Consensus 94 RS~~~~~aylm~~~~~~~~~A~~~v~~ 120 (144)
T 3ezz_A 94 RSATICLAYLMMKKRVRLEEAFEFVKQ 120 (144)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHT
T ss_pred hhHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 345667788755 59999999988864
No 34
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA processing, multifunctional enzyme, nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A 1i9t_A
Probab=26.56 E-value=30 Score=26.49 Aligned_cols=27 Identities=19% Similarity=0.036 Sum_probs=21.0
Q ss_pred CCchhHHHHHHhc-CCCCHHHHHHHHHH
Q 045966 38 GDVWKSIQCYMHE-TGVSEELAREHIKD 64 (145)
Q Consensus 38 G~~~ssV~cYMke-~gvSeEeA~~~i~~ 64 (145)
|-.+..|-|||-+ .|+|.++|++.++.
T Consensus 153 gRTGt~ia~yLm~~~~~s~~eAi~~vr~ 180 (241)
T 2c46_A 153 NRTGFLICAFLVEKMDWSIEAAVATFAQ 180 (241)
T ss_dssp HHHHHHHHHHHHHTTCCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCHHHHHHHHHH
Confidence 4456788899766 59999999988764
No 35
>4evx_A Putative phage endolysin; structural genomics, PSI-biology, program for the characteri secreted effector proteins, pcsep; HET: MLY MSE; 1.70A {Salmonella enterica subsp}
Probab=25.45 E-value=1.5e+02 Score=19.58 Aligned_cols=42 Identities=7% Similarity=-0.004 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCcHH----HHHHHHHHh
Q 045966 52 GVSEELAREHIKDLMRQMWKKVNAYRANKDSPLSQT----TADFMLNLV 96 (145)
Q Consensus 52 gvSeEeA~~~i~~lie~~wK~lN~e~l~~~~~vp~~----~~~~~~N~a 96 (145)
.+|+++|.+-++.-+....+.+++.+ + . ++++. ++.+++|++
T Consensus 49 ~iT~~ea~~ll~~dl~~~~~~v~~~v-~-v-~l~q~q~dALvSf~yNvG 94 (106)
T 4evx_A 49 FITPDQAEAFLLDDLNSCDILLQNCL-P-E-LNDRFQRETLIALMFSIG 94 (106)
T ss_dssp BCCHHHHHHHHHHHHHHHHHHHHHHS-T-T-CCCHHHHHHHHHHHHHHH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhC-C-C-CCCHHHHHHHHHHhHhCC
Confidence 48999999999999999998888754 2 3 57764 555555554
No 36
>3emu_A Leucine rich repeat and phosphatase domain containing protein; structural genomics, hydrolase, PSI-2, protein structure initiative; 2.30A {Entamoeba histolytica}
Probab=25.35 E-value=59 Score=22.76 Aligned_cols=54 Identities=6% Similarity=-0.060 Sum_probs=31.0
Q ss_pred hhHHHHHHHHHHhhcCcccchh------hhccCCchhHHHHHH-hcCCCCHHHHHHHHHHH
Q 045966 12 PDIIQWSSKIFRLQDDLGTSTD------ELKRGDVWKSIQCYM-HETGVSEELAREHIKDL 65 (145)
Q Consensus 12 p~l~~~~~~i~RL~NDi~t~~~------E~~rG~~~ssV~cYM-ke~gvSeEeA~~~i~~l 65 (145)
+++......+.+++++...... -...|-.++.+-+|+ +.+|+|.++|.+.+++.
T Consensus 67 ~~l~~~~~~~~~fI~~~~~~~~~VlVHC~~G~sRS~~vv~ayLm~~~~~s~~~A~~~v~~~ 127 (161)
T 3emu_A 67 HQLYDSIPNAIKFIIRSIQRKEGVLIISGTGVNKAPAIVIAFLMYYQRLSFINAFNKVQGL 127 (161)
T ss_dssp THHHHHHHHHHHHHHHHHHTTCEEEEEESSSSSHHHHHHHHHHHHHTTCCHHHHHHHHHHH
T ss_pred CcHHHHHHHHHHHHHHHHhcCCeEEEEcCCCCcHHHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 4566656666666655321100 001223355666665 66799999999988754
No 37
>3tqc_A Pantothenate kinase; biosynthesis of cofactors, prosthetic groups, carriers, TRAN; HET: ADP; 2.30A {Coxiella burnetii}
Probab=25.22 E-value=42 Score=26.93 Aligned_cols=51 Identities=18% Similarity=0.231 Sum_probs=32.0
Q ss_pred hhHHHHHHHHHHhhcCcccchhhhccCCchhHHHHHHhcC-CCCHHHHHHHHHHHHHHHHHHHhh
Q 045966 12 PDIIQWSSKIFRLQDDLGTSTDELKRGDVWKSIQCYMHET-GVSEELAREHIKDLMRQMWKKVNA 75 (145)
Q Consensus 12 p~l~~~~~~i~RL~NDi~t~~~E~~rG~~~ssV~cYMke~-gvSeEeA~~~i~~lie~~wK~lN~ 75 (145)
|.=++..-.+-|-. ..||..-..+..|..++ +.|+|+|.+. +..-|..+|+
T Consensus 236 ~~d~~~~R~i~Rd~---------~~r~~a~~~~~s~~~~y~~~s~~ea~~~----a~~~w~~~~~ 287 (321)
T 3tqc_A 236 QAQVIQKWYIDRVL---------SFWRTTFKDPHSYFHYLTQMSETEVAAF----AKHVWNEINK 287 (321)
T ss_dssp CHHHHHHHHHHHHH---------HHHHTGGGSTTSTTGGGGGSCHHHHHHH----HHHHHHHTHH
T ss_pred CHHHHHHHHHHhcc---------hhhhhhccChHHHHHHHhcCCHHHHHHH----HHHHHHhccc
Confidence 44445555555533 23444445556788888 8999999965 4556777764
No 38
>4aqn_A Pesticin; toxin, bacteriocin, colicin, three domains, muramidase; 1.98A {Yersinia pestis} PDB: 4epf_A 4arm_B 4arl_A 4arm_A 4arq_B 4arp_A 4arq_A
Probab=25.08 E-value=94 Score=25.72 Aligned_cols=60 Identities=12% Similarity=0.140 Sum_probs=37.7
Q ss_pred hHHHHHHhcCC--CCHHHH-------HHHHHHHHHHHHHHHhhhhhcCCCCCcHHHHHHHHHHhhhhhhccccCCCCC
Q 045966 42 KSIQCYMHETG--VSEELA-------REHIKDLMRQMWKKVNAYRANKDSPLSQTTADFMLNLVRASHFMYLHGDGHG 110 (145)
Q Consensus 42 ssV~cYMke~g--vSeEeA-------~~~i~~lie~~wK~lN~e~l~~~~~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t 110 (145)
.|... +++++ +|.++| ..++...+...|..-|... +-. .+|.++..+++.+ +|++|.+++
T Consensus 239 ~A~~~-L~~~pLtIT~dEA~~L~~av~~~y~~kl~~~Yd~an~g~-~F~-dLPpe~QTVLvSL------~YQyGs~Ls 307 (357)
T 4aqn_A 239 EAYDK-VRTAPLTLSDNEAHLLSNIYIDKFSHKIEGLFNDANIGL-RFS-DLPLRTRTALVSI------GYQKGFKLS 307 (357)
T ss_dssp HHHHH-HHHSCCBCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCSS-CGG-GSCHHHHHHHHHH------HHHHCSCHH
T ss_pred HHHHH-HHhCCCCCCHHHHHHHHHHHHHHHHHHHHHHHhhcccCC-Chh-hCCHHHhhHhhhh------hhhcCCCcc
Confidence 44443 45554 789998 4445555666666654221 223 6999998886654 599988765
No 39
>2o6n_A RH4B designed peptide; right-handed, tetramer, de novo protein; HET: CGU; 1.10A {Synthetic} SCOP: k.17.1.1 PDB: 1tgg_A*
Probab=24.04 E-value=93 Score=16.72 Aligned_cols=24 Identities=17% Similarity=0.145 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhh
Q 045966 55 EELAREHIKDLMRQMWKKVNAYRA 78 (145)
Q Consensus 55 eEeA~~~i~~lie~~wK~lN~e~l 78 (145)
.|.|.++|--+|..+-.++.++.-
T Consensus 4 ieqakkeiaylikkakeeileeik 27 (35)
T 2o6n_A 4 IEQAKKEIAYLIKKAKEEILEEIK 27 (35)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHH
Confidence 377888888888887777766543
No 40
>3hde_A Lysozyme; antimicrobial, bacteriolytic enzyme, glycosidase, hydrolase, late protein; 1.95A {Enterobacteria phage P21}
Probab=23.96 E-value=2e+02 Score=20.61 Aligned_cols=42 Identities=12% Similarity=0.229 Sum_probs=31.0
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCcHH----HHHHHHHHh
Q 045966 52 GVSEELAREHIKDLMRQMWKKVNAYRANKDSPLSQT----TADFMLNLV 96 (145)
Q Consensus 52 gvSeEeA~~~i~~lie~~wK~lN~e~l~~~~~vp~~----~~~~~~N~a 96 (145)
.+|+++|.+-++.-+...-+.+++.. + . ++++. +..+++|+.
T Consensus 65 ~iT~~ea~~lL~~Dl~~~e~~v~~~v-~-v-~L~q~q~dALvSfafNvG 110 (165)
T 3hde_A 65 TYTKAECKALLNKDLATVARQINPYI-K-V-DIPETMRGALYSFVYNVG 110 (165)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHGGGC-C-S-CCCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHHHHHHHHHHhc-C-C-CCCHHHHHHHHHHHHhcC
Confidence 58999999999999999998888743 2 3 56664 445555554
No 41
>1fc3_A SPO0A; response regulator, signaling protein; 2.00A {Geobacillus stearothermophilus} SCOP: a.4.6.3 PDB: 1lq1_A
Probab=23.61 E-value=1.1e+02 Score=21.13 Aligned_cols=48 Identities=8% Similarity=0.275 Sum_probs=33.1
Q ss_pred hcCCCCHHHHHHHHHHHHHHHHHH-----Hhhhhh------cCCCCCcHHHHHHHHHHhh
Q 045966 49 HETGVSEELAREHIKDLMRQMWKK-----VNAYRA------NKDSPLSQTTADFMLNLVR 97 (145)
Q Consensus 49 ke~gvSeEeA~~~i~~lie~~wK~-----lN~e~l------~~~~~vp~~~~~~~~N~aR 97 (145)
+.||+|.....+.|+..|+.+|.. |++-+= +.. |=+..|+..+.+--|
T Consensus 56 ~k~~TT~s~VEraIR~aIe~aw~~g~~~~l~~ifg~t~~~~~~k-PTnsEFI~~iad~Lr 114 (120)
T 1fc3_A 56 KKYNTTASRVERAIRHAIEVAWSRGNLESISSLFGYTVSVSKAK-PTNSEFIAMVADKLR 114 (120)
T ss_dssp HHHTSCHHHHHHHHHHHHHHHHHSSCTTTTHHHHCHHHHTCSSC-CCHHHHHHHHHHHHH
T ss_pred HHhCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCcccCCCC-CCHHHHHHHHHHHHH
Confidence 467999999999999999999976 333220 222 556667766666544
No 42
>2vkc_A NEDD4-binding protein 2; human BCL3 binding protein, alternative splicing, homologous recombination, mismatch repair, small MUTS related; NMR {Homo sapiens}
Probab=23.59 E-value=64 Score=22.45 Aligned_cols=26 Identities=19% Similarity=0.240 Sum_probs=20.2
Q ss_pred HHHHhcCCCCHHHHHHHHHHHHHHHH
Q 045966 45 QCYMHETGVSEELAREHIKDLMRQMW 70 (145)
Q Consensus 45 ~cYMke~gvSeEeA~~~i~~lie~~w 70 (145)
+..+-=||.+.+||+..+...++++.
T Consensus 53 ~~~LDLHGl~v~EA~~~L~~fL~~a~ 78 (135)
T 2vkc_A 53 QNVLDLHGLHVDEALEHLMRVLEKKT 78 (135)
T ss_dssp GTEEECTTCCHHHHHHHHHHHHHHHH
T ss_pred CceEEeCCCcHHHHHHHHHHHHHHHH
Confidence 33333469999999999999988864
No 43
>4e97_A Lysozyme; hydrolase, alkylation with 2-mercaptoethanol; 1.30A {Enterobacteria phage T4} PDB: 4ekp_A 4ekq_A* 4ekr_A 4eks_A
Probab=23.54 E-value=82 Score=22.96 Aligned_cols=44 Identities=9% Similarity=0.130 Sum_probs=31.9
Q ss_pred CCHHHHHHHHHHHHHHHHHHHhhhhhcC---CCCCcH----HHHHHHHHHhh
Q 045966 53 VSEELAREHIKDLMRQMWKKVNAYRANK---DSPLSQ----TTADFMLNLVR 97 (145)
Q Consensus 53 vSeEeA~~~i~~lie~~wK~lN~e~l~~---~~~vp~----~~~~~~~N~aR 97 (145)
+|+++|.+-+.+-+..+-+.+++.+-.+ . .+|. +++..++|++.
T Consensus 81 it~~~a~~ll~~Dl~~~~~~~~~~~~~~~~~~-~l~~~~~~ALvsm~FNlG~ 131 (187)
T 4e97_A 81 ITKDEAEKLFNQDVDAAVRGILRNAKLKPVYD-SLDAVRRCAAINHVFQMGV 131 (187)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHTCTTHHHHHH-HSCHHHHHHHHHHHHHHCH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHHHhcccccc-cCCHHHHHHheeeeeccCC
Confidence 8999999999999999988887643211 1 2554 46677777763
No 44
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual specicity protein phosphatase 23, DUS23_human, malate, structural genomics, PSI; 1.93A {Homo sapiens}
Probab=23.26 E-value=47 Score=22.24 Aligned_cols=27 Identities=22% Similarity=0.449 Sum_probs=21.1
Q ss_pred CCchhHHHHHHhcC-CCCHHHHHHHHHH
Q 045966 38 GDVWKSIQCYMHET-GVSEELAREHIKD 64 (145)
Q Consensus 38 G~~~ssV~cYMke~-gvSeEeA~~~i~~ 64 (145)
|-.+..+-||+-.. |++.++|.+.++.
T Consensus 101 ~Rsg~~~~~~l~~~~~~~~~~a~~~~r~ 128 (151)
T 2img_A 101 GRTGTMLACYLVKERGLAAGDAIAEIRR 128 (151)
T ss_dssp SHHHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHHhCcCHHHHHHHHHH
Confidence 44667777886665 9999999988875
No 45
>1xju_A Lysozyme; secreted inactive conformation, hydrolase; 1.07A {Enterobacteria phage P1} SCOP: d.2.1.3
Probab=22.89 E-value=1.9e+02 Score=20.67 Aligned_cols=44 Identities=5% Similarity=-0.025 Sum_probs=33.6
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHhhhhhcCCCCCcH----HHHHHHHHHhh
Q 045966 52 GVSEELAREHIKDLMRQMWKKVNAYRANKDSPLSQ----TTADFMLNLVR 97 (145)
Q Consensus 52 gvSeEeA~~~i~~lie~~wK~lN~e~l~~~~~vp~----~~~~~~~N~aR 97 (145)
.+|+++|.+-++.-+....+.+++.+ ... ++|+ +++.+++|++-
T Consensus 43 ~iT~~ea~~ll~~dl~~~~~~v~~~~-~~v-~l~q~q~dALvSfayNvG~ 90 (163)
T 1xju_A 43 RKTDQQIAADWEKNILIAERCINQHF-RGK-DMPDNAFSAMTSAAFNMGC 90 (163)
T ss_dssp CCCHHHHHHHHHHHHHHHHHHHHHHS-CGG-GSCHHHHHHHHHHHHHHCH
T ss_pred ccCHHHHHHHHHHHHHHHHHHHHHhc-CCC-CCCHHHHHHHHHHHHhcCc
Confidence 58999999999999999998888743 212 4555 57778888764
No 46
>2hxp_A Dual specificity protein phosphatase 9; human phosphatase, structural genomics, PSI-2, protein structure initiative; 1.83A {Homo sapiens} PDB: 3lj8_A 1mkp_A
Probab=22.68 E-value=47 Score=22.99 Aligned_cols=27 Identities=15% Similarity=0.062 Sum_probs=19.1
Q ss_pred CchhHHHHHHh-cCCCCHHHHHHHHHHH
Q 045966 39 DVWKSIQCYMH-ETGVSEELAREHIKDL 65 (145)
Q Consensus 39 ~~~ssV~cYMk-e~gvSeEeA~~~i~~l 65 (145)
-.++.+-||+- ..|+|.++|.+.+++.
T Consensus 98 RS~~vv~ayLm~~~~~~~~~A~~~v~~~ 125 (155)
T 2hxp_A 98 RSVTVTVAYLMQKLHLSLNDAYDLVKRK 125 (155)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34455667764 4599999999877654
No 47
>2ckx_A NGTRF1, telomere binding protein TBP1; nuclear protein; 1.9A {Nicotiana tabacum} SCOP: a.4.1.3 PDB: 2qhb_A
Probab=22.66 E-value=1.6e+02 Score=18.91 Aligned_cols=53 Identities=17% Similarity=0.214 Sum_probs=34.7
Q ss_pred HHHHHhhhhhc--CCCCCcHHHHHHHHHHhhhhhhccccCCCCCCCchhHHHHHHhh
Q 045966 69 MWKKVNAYRAN--KDSPLSQTTADFMLNLVRASHFMYLHGDGHGVQNQETMDVAFTL 123 (145)
Q Consensus 69 ~wK~lN~e~l~--~~~~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t~~~~~~k~~I~sl 123 (145)
.|++|-+..+. ++ .-+..|++..-|+.|....-++..-|-..| .++.+.|.++
T Consensus 22 ~W~~I~~~~~~~~~~-RT~~~lKdrWrnllk~~~~~p~~~~~~~~p-~~~~~rv~~~ 76 (83)
T 2ckx_A 22 RWRDVKMRAFDNADH-RTYVDLKDKWKTLVHTASIAPQQRRGEPVP-QDLLDRVLAA 76 (83)
T ss_dssp CHHHHHHHHCTTCTT-SCHHHHHHHHHHHHHHHHSCGGGCCSSCCC-HHHHHHHHHH
T ss_pred CcHHHHHhhccccCC-CCHHHHHHHHHHHHHhccCCcccccCCCCC-HHHHHHHHHH
Confidence 79998876321 33 567789999999998777666544444445 3566655543
No 48
>3mtu_A Tropomyosin alpha-1 chain, microtubule-associated RP/EB family member 1; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: MSE; 2.10A {Gallus gallus} PDB: 3mud_C*
Probab=22.45 E-value=31 Score=22.02 Aligned_cols=18 Identities=22% Similarity=0.460 Sum_probs=15.3
Q ss_pred HhhhhhhccccCCCCCCC
Q 045966 95 LVRASHFMYLHGDGHGVQ 112 (145)
Q Consensus 95 ~aR~~~~~Y~~~Dg~t~~ 112 (145)
..|+..++|...|||..|
T Consensus 57 ~~~I~~ILYat~~~f~~p 74 (75)
T 3mtu_A 57 LQRIVDILYATDEGFVIP 74 (75)
T ss_dssp HHHHHHHHHCBTTBCSSC
T ss_pred HHHHHHHHhccCcCCCCC
Confidence 357788999999999987
No 49
>1zzw_A Dual specificity protein phosphatase 10; MKP, PTP, hydrolase; 1.60A {Homo sapiens}
Probab=22.30 E-value=49 Score=22.45 Aligned_cols=27 Identities=15% Similarity=0.117 Sum_probs=19.1
Q ss_pred CchhHHHHHHh-cCCCCHHHHHHHHHHH
Q 045966 39 DVWKSIQCYMH-ETGVSEELAREHIKDL 65 (145)
Q Consensus 39 ~~~ssV~cYMk-e~gvSeEeA~~~i~~l 65 (145)
-.+..+-||+- ..|+|.++|.+++++.
T Consensus 96 RSg~~~~ayl~~~~~~~~~~a~~~v~~~ 123 (149)
T 1zzw_A 96 RSATIVIAYLMKHTRMTMTDAYKFVKGK 123 (149)
T ss_dssp HHHHHHHHHHHHHSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCHHHHHHHHHHH
Confidence 34455667764 5699999999887654
No 50
>2aje_A Telomere repeat-binding protein; DNA-binding, Trp, MYB motif, DNA binding protein; NMR {Arabidopsis thaliana} SCOP: a.4.1.3
Probab=22.15 E-value=1.9e+02 Score=19.53 Aligned_cols=53 Identities=15% Similarity=0.189 Sum_probs=35.3
Q ss_pred HHHHHhhhhhc--CCCCCcHHHHHHHHHHhhhhhhccccCCCCCCCchhHHHHHHhh
Q 045966 69 MWKKVNAYRAN--KDSPLSQTTADFMLNLVRASHFMYLHGDGHGVQNQETMDVAFTL 123 (145)
Q Consensus 69 ~wK~lN~e~l~--~~~~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t~~~~~~k~~I~sl 123 (145)
.|++|-+.++. ++ .-+..|++..-|+.|....-.+-..|=..|+ ++.+.|.+|
T Consensus 35 ~W~~I~~~~~~~f~~-RT~v~lKdrWrnllk~~~~~p~~~rg~~~P~-~~l~rv~~~ 89 (105)
T 2aje_A 35 RWRDVKLCAFEDADH-RTYVDLKDKWKTLVHTAKISPQQRRGEPVPQ-ELLNRVLNA 89 (105)
T ss_dssp SHHHHHSSSSSSTTC-CCHHHHHHHHHHHHHTTTCCTTTTTCCSCCC-HHHHHHHHH
T ss_pred ChHHHHHHhccccCC-CCHHHHHHHHHHHHhhccCCcccccCCCCCH-HHHHHHHHH
Confidence 89999886531 33 5677999999999987766555444444453 566666553
No 51
>3f81_A Dual specificity protein phosphatase 3; hydrolase, protein dual-specificity phosphatase, inhibitor; HET: STT; 1.90A {Homo sapiens} SCOP: c.45.1.1 PDB: 1vhr_A* 1j4x_A*
Probab=21.44 E-value=52 Score=23.20 Aligned_cols=28 Identities=7% Similarity=0.045 Sum_probs=20.5
Q ss_pred CCchhHHHHHH-hcCCCCHHHHHHHHHHH
Q 045966 38 GDVWKSIQCYM-HETGVSEELAREHIKDL 65 (145)
Q Consensus 38 G~~~ssV~cYM-ke~gvSeEeA~~~i~~l 65 (145)
|-.++.+-+|+ +..|+|.++|.++++..
T Consensus 127 ~RSg~~v~ayLm~~~~~~~~~A~~~v~~~ 155 (183)
T 3f81_A 127 SRSPTLVIAYLMMRQKMDVKSALSIVRQN 155 (183)
T ss_dssp SHHHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHhCCCHHHHHHHHHHc
Confidence 34556566776 56699999999988753
No 52
>1esx_A VPR protein; helix, amphipatic, turn, viral protein; NMR {Synthetic} SCOP: j.11.1.1 PDB: 1m8l_A 1vpc_A 1x9v_A
Probab=21.14 E-value=68 Score=21.70 Aligned_cols=50 Identities=10% Similarity=0.097 Sum_probs=30.7
Q ss_pred HHHHHHHhhhhhcCCCCCcHHHHHHHHHHhhhhhhccccCCCCCCCchhHHHHHHhhcc
Q 045966 67 RQMWKKVNAYRANKDSPLSQTTADFMLNLVRASHFMYLHGDGHGVQNQETMDVAFTLLF 125 (145)
Q Consensus 67 e~~wK~lN~e~l~~~~~vp~~~~~~~~N~aR~~~~~Y~~~Dg~t~~~~~~k~~I~sll~ 125 (145)
.+.-.+||+|..+ .+|++.+..++|-+ .+ .+||.++.. ..+-..+..+||
T Consensus 20 le~LeELk~EAvr---HFpr~~L~~lgq~i--ye---~~Gdtw~g~-~~~irilQ~aLF 69 (96)
T 1esx_A 20 LELLEELKNEAVR---HFPRIWLHSLGQHI--YE---TYGDTWTGV-EALIRILQQLLF 69 (96)
T ss_dssp HHHHHHHHHHHHH---STTTCSHHHHHHHH--HH---HSSSSSSHH-HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHH---cCCHHHHHHHHHHH--HH---hhcCcHHHH-HHHHHHHHHHHH
Confidence 3455678888886 79999888888754 11 257766643 233333444443
No 53
>1yoz_A Hypothetical protein AF0941; APC5573, midwest center for structural genomics, MCSG, protein structure initiative, PSI, structural genomics; 2.00A {Archaeoglobus fulgidus} SCOP: a.253.1.1
Probab=21.11 E-value=96 Score=21.35 Aligned_cols=52 Identities=15% Similarity=0.178 Sum_probs=33.6
Q ss_pred hHHHHHHHHHHhhcCcccc--------hhhhccCCchhHHHHHHhcCCCCHHHHHHHHHHH
Q 045966 13 DIIQWSSKIFRLQDDLGTS--------TDELKRGDVWKSIQCYMHETGVSEELAREHIKDL 65 (145)
Q Consensus 13 ~l~~~~~~i~RL~NDi~t~--------~~E~~rG~~~ssV~cYMke~gvSeEeA~~~i~~l 65 (145)
..+.-++-+.|-+-|+--. -+|+=|.++.-.+.-|| -.|+|+|||...+..+
T Consensus 8 tyLekmGEl~k~~m~VeeAk~L~D~eni~EmFRsD~E~I~~~f~-~G~~t~EEa~~nl~~L 67 (116)
T 1yoz_A 8 SFLDRMGEIIRGEKSVEEADKLLDQKNIFEMFRSDCEEILNLYK-SGKAEKEEVQRNFYLL 67 (116)
T ss_dssp HHHHHHHHHHTTSSCGGGHHHHTCHHHHHHHHHHHHHHHHHHHH-TTSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhhHHHHHHccCHHHHHHHHHhhHHHHHHHHH-cCCccHHHHHHHHHHH
Confidence 3455556666655543322 13566777766666776 5689999999887665
No 54
>3ipi_A Geranyltranstransferase; isoprene biosynthesis, helical bundle, protein structure initiative II (PSI II), structural genomics, nysgxrc; 1.90A {Methanosarcina mazei}
Probab=20.98 E-value=2e+02 Score=22.70 Aligned_cols=61 Identities=11% Similarity=0.064 Sum_probs=40.1
Q ss_pred hHHHHHHHHHHhhcCcccchhhh-----ccCCchhHHHHHHhcCCC--CHHHHHHHHHHHHHHHHHHHh
Q 045966 13 DIIQWSSKIFRLQDDLGTSTDEL-----KRGDVWKSIQCYMHETGV--SEELAREHIKDLMRQMWKKVN 74 (145)
Q Consensus 13 ~l~~~~~~i~RL~NDi~t~~~E~-----~rG~~~ssV~cYMke~gv--SeEeA~~~i~~lie~~wK~lN 74 (145)
++-+..++.+-+.||+-.+.... ..|+. +....|-.+.+- ..|.|++..++.++++.+.|.
T Consensus 194 ~~g~~lGlaFQI~DDilD~~~~~~gkd~~~gk~-Tlp~l~al~~~~~~~le~a~~~a~~~~~~A~~~L~ 261 (295)
T 3ipi_A 194 HFGNALGTAYQIVDDILEFLEVVEGKESKFTSE-TLPHIYMKSTSKEEALKKSIDCVKLHVAAAKETLE 261 (295)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHC-------C-CHHHHHTTTSCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHhcCCccCCCcccCcc-cHHHHHHHhcCchhHHHHHHHHHHHHHHHHHHHHH
Confidence 45677888889999998875432 23443 666677655431 147778888888888887765
No 55
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich, hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB: 1fq1_A*
Probab=20.94 E-value=63 Score=23.53 Aligned_cols=28 Identities=25% Similarity=0.404 Sum_probs=21.6
Q ss_pred CCchhHHHHHHhc-C-CCCHHHHHHHHHHH
Q 045966 38 GDVWKSIQCYMHE-T-GVSEELAREHIKDL 65 (145)
Q Consensus 38 G~~~ssV~cYMke-~-gvSeEeA~~~i~~l 65 (145)
|-.+..+-||+.. + |++.++|++.++..
T Consensus 145 gRTg~~~a~~L~~~~~g~~~~~a~~~vr~~ 174 (212)
T 1fpz_A 145 GRSCLVAACLLLYLSDTISPEQAIDSLRDL 174 (212)
T ss_dssp SHHHHHHHHHHHHHCSSCCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHhccCCCHHHHHHHHHHh
Confidence 4456777789876 3 99999999888654
No 56
>1yz4_A DUSP15, dual specificity phosphatase-like 15 isoform A; hydrolase; HET: BOG; 2.40A {Homo sapiens}
Probab=20.94 E-value=50 Score=22.81 Aligned_cols=25 Identities=24% Similarity=0.210 Sum_probs=18.2
Q ss_pred chhHHHHHH-hcCCCCHHHHHHHHHH
Q 045966 40 VWKSIQCYM-HETGVSEELAREHIKD 64 (145)
Q Consensus 40 ~~ssV~cYM-ke~gvSeEeA~~~i~~ 64 (145)
.++.+-+|+ +..|+|.++|.+++++
T Consensus 98 Sg~~~~aylm~~~~~~~~~a~~~v~~ 123 (160)
T 1yz4_A 98 STTIVTAYVMTVTGLGWRDVLEAIKA 123 (160)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 344456776 5569999999988765
No 57
>1lj2_A NSP3-C, nonstructural RNA-binding protein 34, NS34, NCVP4; NSP3, homodimer, translation, mRNA, closed loop, coiled coil; 2.38A {Simian rotavirus A} SCOP: h.1.13.2
Probab=20.93 E-value=58 Score=22.49 Aligned_cols=19 Identities=26% Similarity=0.489 Sum_probs=14.5
Q ss_pred CCchhHHHHHHhcCCCCHH
Q 045966 38 GDVWKSIQCYMHETGVSEE 56 (145)
Q Consensus 38 G~~~ssV~cYMke~gvSeE 56 (145)
|.+.|||+||++.-..+.|
T Consensus 34 ~slisSiEw~l~Smel~de 52 (110)
T 1lj2_A 34 GSLTSSIEWYLRSMELDPE 52 (110)
T ss_dssp HHHHHHHHHHHHTSCCCHH
T ss_pred HHHHHHHHHHHhhccCChH
Confidence 6788999999986665543
No 58
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=20.21 E-value=72 Score=20.07 Aligned_cols=17 Identities=24% Similarity=0.472 Sum_probs=15.1
Q ss_pred CCHHHHHHHHHHHHHHH
Q 045966 53 VSEELAREHIKDLMRQM 69 (145)
Q Consensus 53 vSeEeA~~~i~~lie~~ 69 (145)
.|.|+|.+.+++|+++.
T Consensus 12 ~t~eea~~~F~~LL~e~ 28 (71)
T 1uzc_A 12 NTKEEAKQAFKELLKEK 28 (71)
T ss_dssp CSHHHHHHHHHHHHHHT
T ss_pred CCHHHHHHHHHHHHHHc
Confidence 58999999999999874
No 59
>2nt2_A Protein phosphatase slingshot homolog 2; alpha/beta hydrolase; 2.10A {Homo sapiens}
Probab=20.09 E-value=59 Score=21.98 Aligned_cols=26 Identities=19% Similarity=0.240 Sum_probs=18.4
Q ss_pred chhHHHHHH-hcCCCCHHHHHHHHHHH
Q 045966 40 VWKSIQCYM-HETGVSEELAREHIKDL 65 (145)
Q Consensus 40 ~~ssV~cYM-ke~gvSeEeA~~~i~~l 65 (145)
.++.+-+|+ +..|+|.++|.+++++.
T Consensus 95 S~~~v~ayLm~~~~~~~~~A~~~v~~~ 121 (145)
T 2nt2_A 95 SASTVIAYAMKEYGWNLDRAYDYVKER 121 (145)
T ss_dssp HHHHHHHHHHHHHCCCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCHHHHHHHHHHH
Confidence 334455665 55699999999888763
No 60
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus musculus} PDB: 3rgq_A*
Probab=20.00 E-value=59 Score=21.99 Aligned_cols=26 Identities=23% Similarity=0.181 Sum_probs=18.6
Q ss_pred CchhHHHHHH-hcCCCCHHHHHHHHHH
Q 045966 39 DVWKSIQCYM-HETGVSEELAREHIKD 64 (145)
Q Consensus 39 ~~~ssV~cYM-ke~gvSeEeA~~~i~~ 64 (145)
-.++.+-+|+ +..|+|.++|.+.++.
T Consensus 102 Rsg~~~~a~l~~~~~~~~~~a~~~v~~ 128 (157)
T 3rgo_A 102 RSATMVAAYLIQVHNWSPEEAIEAIAK 128 (157)
T ss_dssp HHHHHHHHHHHHHHTCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCHHHHHHHHHH
Confidence 3445556675 4469999999988876
Done!