BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045972
(299 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q3ZBM7|TRPT1_BOVIN tRNA 2'-phosphotransferase 1 OS=Bos taurus GN=TRPT1 PE=2 SV=3
Length = 254
Score = 140 bits (353), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 90/234 (38%), Positives = 132/234 (56%), Gaps = 22/234 (9%)
Query: 79 GERRRSRGGGG--------SKDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKL 130
G RR + G G +D+ L + L+ LRH A +L L M +DGFV ++ LL+L
Sbjct: 6 GRRRETAGPKGRRAHRPPQDQDRDVQLSKALSYALRHGALKLGLPMGADGFVPLDALLQL 65
Query: 131 NLKTFAQIPLRSHTVDDIWEAVRKDNKQRFSLLEENGEL--LIRANQGHTITTVESESLL 188
RS + +D+ V + KQRF+L + LIRANQGH++ E E L
Sbjct: 66 PQ-------FRSFSAEDVQRVVDTNVKQRFALQPGDPSTGPLIRANQGHSLQVPELE--L 116
Query: 189 KPILSAEEVSV-CVHGTYKRNLDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNV 247
+P+ + + + + VHGT++++ SIL GL R H+H + GLP D VISGMR + V
Sbjct: 117 EPLETPQALPLMLVHGTFRQHWPSILLKGLSCRGRTHIHLAPGLPGDPGVISGMRPNCEV 176
Query: 248 LIFLNVRKALADGMKLYISDNKVVLTEG-FDGVVPVEYF-EKIESWPDRRPISF 299
+F+N ALADG+ + S N V+LT G DGV+P +YF E ++ P R+P+S
Sbjct: 177 AVFINGPLALADGIPFFRSTNGVILTPGNADGVLPPKYFKEALQLRPTRKPLSL 230
>sp|Q5EAR5|TRPT1_DANRE tRNA 2'-phosphotransferase 1 OS=Danio rerio GN=trpt1 PE=2 SV=2
Length = 225
Score = 138 bits (347), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 121/198 (61%), Gaps = 14/198 (7%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
L + L+ +LRH AS++ L M SDGFV VE+LL A RS +VDD+ V ++
Sbjct: 25 LSKSLSYVLRHGASKMGLQMNSDGFVFVEELL-------AHQQFRSFSVDDVERVVASND 77
Query: 157 KQRFSLLE--ENGELLIRANQGHTITTVESESLLKPILSAEE--VSVCVHGTYKRNLDSI 212
KQRF L + E+ L IRANQGH++ + E L+ I ++ VHG+Y ++ SI
Sbjct: 78 KQRFKLCKHPEDDRLQIRANQGHSVQVTDLE--LREISQDDQDYPREAVHGSYMKHWPSI 135
Query: 213 LESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVL 272
GL RM R H+H + GLP +G VISGMR+ ++ ++++V KA++DG+K + S+N V+L
Sbjct: 136 RSQGLSRMNRTHIHLAPGLPGEGRVISGMRQSCDLAVYIDVTKAMSDGIKFFWSENGVLL 195
Query: 273 TEG-FDGVVPVEYFEKIE 289
T G G++ YF + +
Sbjct: 196 TPGDAAGILAPCYFSRAQ 213
>sp|Q8K3A2|TRPT1_MOUSE tRNA 2'-phosphotransferase 1 OS=Mus musculus GN=Trpt1 PE=2 SV=2
Length = 249
Score = 135 bits (340), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 82/214 (38%), Positives = 125/214 (58%), Gaps = 14/214 (6%)
Query: 91 KDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWE 150
+D+ L + L+ LRH A +L L MR+DGFV ++ LL+L S +++D+
Sbjct: 20 QDRNVQLSKALSYALRHGALKLGLPMRADGFVPLQALLQLPQ-------FHSFSIEDVQL 72
Query: 151 AVRKDNKQRFSLL--EENGELLIRANQGHTITTVESESLLKPILSAEEVSVC-VHGTYKR 207
V + KQRF+L E + LLIRANQGH++ E E L P+ + + + + VHGT+ +
Sbjct: 73 VVNTNEKQRFTLQPGEPSTGLLIRANQGHSLQVPELE--LTPLETPQALPLTLVHGTFWK 130
Query: 208 NLDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISD 267
+ SIL GL R R H+H + GLP D VISG+R + V +F++ AL DG+ + S
Sbjct: 131 HWPSILLKGLSRQGRTHIHLASGLPGDPGVISGIRPNCEVAVFIDGPLALTDGIPFFCSA 190
Query: 268 NKVVLTEG-FDGVVPVEYF-EKIESWPDRRPISF 299
N V+LT G +G + +YF E ++ P R+P+S
Sbjct: 191 NGVILTPGNAEGFLLPKYFKEALQLRPTRKPLSL 224
>sp|O14045|TPT1_SCHPO Putative tRNA 2'-phosphotransferase OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC2C4.12c PE=3 SV=2
Length = 365
Score = 131 bits (329), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 116/192 (60%), Gaps = 9/192 (4%)
Query: 99 RLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQ 158
+ L+++LRH A L +R DG+++V+ +LKL R ++ + V+ ++K+
Sbjct: 43 KALSKVLRHTAKANGLQIREDGYIEVDSILKLP-------QFRGMGMELLLSIVKGNDKK 95
Query: 159 RFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESGLK 218
RF++ E G L IRANQGH+I V+ + I +A + VHGT K I + GL
Sbjct: 96 RFTMEEVEGVLYIRANQGHSIKAVQVP--MARIDNASSIPKVVHGTKKELWPVISKQGLS 153
Query: 219 RMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGFDG 278
RMKR H+H + GL D VISG+R+ + I+++ KA+ DG++ Y S+N V+LTEG +G
Sbjct: 154 RMKRNHIHCATGLYGDPGVISGIRKSCTLYIYIDSAKAMQDGVEFYRSENGVILTEGVNG 213
Query: 279 VVPVEYFEKIES 290
++ +YF ++E+
Sbjct: 214 LLSSKYFSRVET 225
>sp|Q86TN4|TRPT1_HUMAN tRNA 2'-phosphotransferase 1 OS=Homo sapiens GN=TRPT1 PE=1 SV=2
Length = 253
Score = 127 bits (320), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 87/240 (36%), Positives = 130/240 (54%), Gaps = 19/240 (7%)
Query: 65 SGGGRGRGHDIKNDGERRRSRGGGGSKDKIDALGRLLTRILRHMASELNLNMRSDGFVKV 124
SGGGR + G R R +D+ L + L+ LRH A +L L M +DGFV +
Sbjct: 4 SGGGR-----QEAAGSRGRRAPRPREQDRDVQLSKALSYALRHGALKLGLPMGADGFVPL 58
Query: 125 EDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQRFSLL--EENGELLIRANQGHTITTV 182
LL+L R + +D+ V + KQRF+L + + LLIRANQGH++
Sbjct: 59 GTLLQLPQ-------FRGFSAEDVQRVVDTNRKQRFALQLGDPSTGLLIRANQGHSLQVP 111
Query: 183 ESESLLKPILSAEEVS-VCVHGTYKRNLDSILESGLKRMKRLHVHFSCGLPTDGEVISGM 241
+ E L P+ + + + + VHGT+ ++ SIL GL R H+H + GLP D +ISGM
Sbjct: 112 KLE--LMPLETPQALPPMLVHGTFWKHWPSILLKGLSCQGRTHIHLAPGLPGDPGIISGM 169
Query: 242 RRDVNVLIFLNVRKALADGMKLYISDNKVVLTEG-FDGVVPVEYF-EKIESWPDRRPISF 299
R + +F++ ALADG+ + S N V+LT G DG + +YF E ++ P R+P+S
Sbjct: 170 RSHCEIAVFIDGPLALADGIPFFRSANGVILTPGNTDGFLLPKYFKEALQLRPTRKPLSL 229
>sp|Q12272|TPT1_YEAST tRNA 2'-phosphotransferase OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=TPT1 PE=1 SV=1
Length = 230
Score = 95.1 bits (235), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/206 (35%), Positives = 115/206 (55%), Gaps = 19/206 (9%)
Query: 91 KDKIDA-LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSH--TVDD 147
KDK D L + L+ +LRH A + L + S+G+ +++LL N L++H TVDD
Sbjct: 7 KDKRDVQLSKALSYLLRHTAVKEKLTIDSNGYTPLKELLSHNR-------LKTHKCTVDD 59
Query: 148 IWEAVRKDNKQRFSLLEENG-ELLIRANQGHTITTVE-SESLLKPILSAEEVSV-CVHGT 204
I V++++KQRF + E I A QGH+I +++ S+ +L PI A ++ +HGT
Sbjct: 60 IHRIVKENDKQRFHIKTLGADEEWICATQGHSIKSIQPSDEVLVPITEASQLPQELIHGT 119
Query: 205 YKRNLDSILESG-LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKAL-ADGMK 262
+++ I+ESG + M R HVH S G+ VISGMR NV IF++ L +K
Sbjct: 120 NLQSVIKIIESGAISPMSRNHVHLSPGMLHAKGVISGMRSSSNVYIFIDCHSPLFFQTLK 179
Query: 263 LYISDNKVVLTEGFDGVVPVEYFEKI 288
++ S N V L+ +PVE +K+
Sbjct: 180 MFRSLNNVYLSSS----IPVELIQKV 201
>sp|B2IZ22|KPTA_NOSP7 Probable RNA 2'-phosphotransferase OS=Nostoc punctiforme (strain
ATCC 29133 / PCC 73102) GN=kptA PE=3 SV=1
Length = 181
Score = 89.0 bits (219), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/199 (32%), Positives = 102/199 (51%), Gaps = 19/199 (9%)
Query: 90 SKDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIW 149
S ++ + + L++ LRH + + + G+V V++L+ K + P+ T ++
Sbjct: 2 SDSRLVKISKYLSKYLRHTPDAIGIKLAPGGWVAVDELITACAKN--KFPI---TRQELE 56
Query: 150 EAVRKDNKQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNL 209
V KQRFS ++ LIRANQGH+ VE + L+P++ +E+ HGT +++
Sbjct: 57 AVVESSEKQRFSF--DSTGTLIRANQGHS---VEVDLQLEPVVPPDEL---YHGTGHKSV 108
Query: 210 DSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNK 269
DSI+E+GL +M R HVH S + T V G R V+ ++ G Y SDN
Sbjct: 109 DSIMETGLCKMSRHHVHLSKDIATAQTV--GARHGKPVVFAISAAAMHQAGYIFYCSDNG 166
Query: 270 VVLTEGFDGVVPVEYFEKI 288
V L + VP EY +KI
Sbjct: 167 VWLVDR----VPPEYLQKI 181
>sp|B9JFP7|KPTA_AGRRK Probable RNA 2'-phosphotransferase OS=Agrobacterium radiobacter
(strain K84 / ATCC BAA-868) GN=kptA PE=3 SV=1
Length = 185
Score = 86.3 bits (212), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/192 (29%), Positives = 99/192 (51%), Gaps = 21/192 (10%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ + ++ +LRH E+ L + +G+V EDL K F T D+ E + +
Sbjct: 10 ISKFMSYVLRHAPHEVGLTLDPEGWVPFEDLKKAVFTRFDV------TDADVLEVIETNP 63
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
K+RF+L+ + IRA QGH+ V+ + L P A S HGT + +I +G
Sbjct: 64 KKRFTLMGDR----IRAAQGHS---VDVDLALAP---ATPPSQLFHGTTMESWTAIQNAG 113
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
LK+M+R HVH S T ++++ R+ V++++ + + ++G +++DN+V LT+
Sbjct: 114 LKKMQRHHVHLSADTET-AKIVAARRKGVHIILEVEAARMHSEGHSFFVTDNEVWLTDH- 171
Query: 277 DGVVPVEYFEKI 288
VP +Y I
Sbjct: 172 ---VPSQYLSPI 180
>sp|Q8XP22|KPTA_CLOPE Probable RNA 2'-phosphotransferase OS=Clostridium perfringens
(strain 13 / Type A) GN=kptA PE=3 SV=1
Length = 183
Score = 84.7 bits (208), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 61/192 (31%), Positives = 103/192 (53%), Gaps = 19/192 (9%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ + ++ ILRH E+ L + G++ V DL++ K++ + ++DD+ VR+D+
Sbjct: 8 ISKYISLILRHKPEEIGLKLDEHGYLGVLDLIEGLNKSY-----KGFSMDDLERIVREDS 62
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
K R+S E+ + IRANQGH+I +KP V HGT ++ ++SIL++G
Sbjct: 63 KGRYSFNEDKSK--IRANQGHSIKVDLGLEAIKP------PKVLYHGTGRKYIESILKNG 114
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
L + +R +VH S + T I G R V++ ++ DG+K Y+S N V L +
Sbjct: 115 LIKKERQYVHLSKDIETAS--IVGKRHGDLVILEVDSESMFKDGIKFYLSKNNVWLCD-- 170
Query: 277 DGVVPVEYFEKI 288
V VEY ++I
Sbjct: 171 --YVKVEYIKEI 180
>sp|B5ZQT5|KPTA_RHILW Probable RNA 2'-phosphotransferase OS=Rhizobium leguminosarum bv.
trifolii (strain WSM2304) GN=kptA PE=3 SV=1
Length = 184
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 54/189 (28%), Positives = 96/189 (50%), Gaps = 21/189 (11%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ + ++ +LRH L + ++G+V ++L K + + DI E V +
Sbjct: 10 VSKYMSYVLRHAPEAAGLTLDAEGWVSFDELEKALTSKY------DVSRADIIEIVENNP 63
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
K RF++++ IRANQGH+ V+ + L P+ E + HGT N SI G
Sbjct: 64 KNRFTIVDNR----IRANQGHS---VDVDLALTPV---EPPAALYHGTSSANWHSIEREG 113
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
LK+M+R HVH S + T ++++ R+ +++ ++ + ++G ++SDN V L E
Sbjct: 114 LKKMQRHHVHLSADVET-AKIVATRRKGEYLILRVDAARMFSEGHSFFVSDNGVWLAES- 171
Query: 277 DGVVPVEYF 285
VPV+Y
Sbjct: 172 ---VPVQYL 177
>sp|Q0TUT1|KPTA_CLOP1 Probable RNA 2'-phosphotransferase OS=Clostridium perfringens
(strain ATCC 13124 / NCTC 8237 / Type A) GN=kptA PE=3
SV=1
Length = 186
Score = 80.5 bits (197), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 60/192 (31%), Positives = 101/192 (52%), Gaps = 19/192 (9%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ + ++ ILRH E+ L + G++ V DL++ K++ ++DD+ VR+D+
Sbjct: 8 ISKYISLILRHKPEEIGLKLDEHGYLGVLDLIEGLNKSY-----EGFSMDDLERIVREDS 62
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
K R+S E+ + IRANQGH+I +KP V HGT ++ L+SIL++G
Sbjct: 63 KGRYSFNEDKSK--IRANQGHSIKVDLGLEPIKP------PKVLYHGTGRKYLESILKNG 114
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
L + +R +VH S + T I G R V++ ++ DG+K Y+S N V L
Sbjct: 115 LIKKERNYVHLSKDIETAS--IVGKRHGDLVILEVDSESMFNDGIKFYLSKNNVWLC--- 169
Query: 277 DGVVPVEYFEKI 288
VP +Y +++
Sbjct: 170 -NYVPKKYIKEL 180
>sp|B0C090|KPTA_ACAM1 Probable RNA 2'-phosphotransferase OS=Acaryochloris marina (strain
MBIC 11017) GN=kptA PE=3 SV=1
Length = 181
Score = 79.3 bits (194), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/199 (31%), Positives = 99/199 (49%), Gaps = 23/199 (11%)
Query: 93 KIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDD--IWE 150
++ A+ + L+ ILRH ++L + + G+ + +L++ K H + + I E
Sbjct: 4 QLKAVSKFLSYILRHRPEAISLELNAGGWAAISELIQCASK-------HDHFLSEEIIKE 56
Query: 151 AVRKDNKQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLD 210
V ++K+RF L E+G+ IRANQGH+I + L P+ + V HGT R L
Sbjct: 57 VVVSNDKKRFKL-SEDGQY-IRANQGHSIRV---DLDLLPLTPPD---VLFHGTATRFLA 108
Query: 211 SILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKV 270
SI+ GL R HVH S T + G R ++ +N +K DG Y S+N V
Sbjct: 109 SIMAKGLLPSGRQHVHLSASYET--AIAVGRRHGKPTVLEINAQKMQGDGYLFYRSENGV 166
Query: 271 VLTEGFDGVVPVEYFEKIE 289
LT+ VP +YF ++E
Sbjct: 167 WLTDH----VPAQYFVEVE 181
>sp|A9B356|KPTA_HERA2 Probable RNA 2'-phosphotransferase OS=Herpetosiphon aurantiacus
(strain ATCC 23779 / DSM 785) GN=kptA PE=3 SV=1
Length = 182
Score = 79.0 bits (193), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 85/181 (46%), Gaps = 15/181 (8%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ + L++ LRH L L + G+V VE LL I L ++ E V ++N
Sbjct: 9 VSKYLSKHLRHQPERLGLTLEPGGWVGVEQLLAACAANNVAISL-----AELHEVVEQNN 63
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
KQRF + G+ IRA+QGH++T +P + + HGT K NL IL G
Sbjct: 64 KQRFGF-DPTGQK-IRAHQGHSVTVDLGLVAQQPPI------ILYHGTAKHNLAIILRDG 115
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
L+ M+R HVH S T +V G R V++ + + G + SDN V LT
Sbjct: 116 LRPMQRQHVHLSRDRATALQV--GARHGQAVILIVQADELFQAGQAFFCSDNGVWLTTAI 173
Query: 277 D 277
D
Sbjct: 174 D 174
>sp|Q1MG28|KPTA_RHIL3 Probable RNA 2'-phosphotransferase OS=Rhizobium leguminosarum bv.
viciae (strain 3841) GN=kptA PE=3 SV=1
Length = 184
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 95/196 (48%), Gaps = 21/196 (10%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ + ++ +LRH L + S G+V ++L K + + +I E V +
Sbjct: 10 VSKYMSYVLRHAPDAAGLTLDSGGWVSFDELEKALASKY------DVSRAEIIEIVENNP 63
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
K+RF+L IRANQGH++ + + AE + HGT N SI G
Sbjct: 64 KKRFTLAHNR----IRANQGHSV------DIDLALNQAEPPAALFHGTSLTNWQSIEREG 113
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
LK+M+R HVH S + T ++++ R+ ++++ ++ + ++G ++SDN V L E
Sbjct: 114 LKKMQRHHVHLSADVET-AKIVAARRKGEHIILRVDAARMFSEGHSFFVSDNGVWLAES- 171
Query: 277 DGVVPVEYFEKIESWP 292
VPV+Y + P
Sbjct: 172 ---VPVQYLSRNAGTP 184
>sp|Q0SWM0|KPTA_CLOPS Probable RNA 2'-phosphotransferase OS=Clostridium perfringens
(strain SM101 / Type A) GN=kptA PE=3 SV=1
Length = 186
Score = 78.6 bits (192), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/192 (30%), Positives = 100/192 (52%), Gaps = 19/192 (9%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ + ++ ILRH E+ L + G++ V DL++ K++ ++DD+ VR+D+
Sbjct: 8 ISKYISLILRHKPEEIGLKLDEHGYLVVLDLIEGINKSY-----EGFSMDDLERIVREDS 62
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
K R+S E+ + IRANQGH+I +KP V HGT ++ L+SIL++G
Sbjct: 63 KGRYSFNEDKSK--IRANQGHSIKVDLGLEEIKP------PKVLYHGTGRKYLESILKNG 114
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
L + +R ++H S T I G R V++ ++ DG+K Y+S N V L
Sbjct: 115 LIKKERQYIHLSKDRETAS--IVGKRHGDLVILEVDSESMFNDGIKFYLSKNNVWLC--- 169
Query: 277 DGVVPVEYFEKI 288
VP +Y +++
Sbjct: 170 -NYVPKKYIKEL 180
>sp|O29841|KPTA1_ARCFU Probable RNA 2'-phosphotransferase 1 OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=kptA1 PE=3 SV=1
Length = 216
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 102/200 (51%), Gaps = 26/200 (13%)
Query: 91 KDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIW- 149
K+K++ LG+ ++ +LRH + LNM +G+V NL++ A++ R + +IW
Sbjct: 30 KEKVEKLGKFISGVLRHFPDKFGLNMDENGWV--------NLESLARVVKRRYKWANIWL 81
Query: 150 --EAVRKDNKQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKR 207
V D KQR+ L + IRA GH+I L A+E V +GT +
Sbjct: 82 IKALVYSDEKQRYELKGDK----IRARYGHSIDVK-----LSDFPEAKE-DVLYYGTSEE 131
Query: 208 NLDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISD 267
+LE G+K + + +VH S + EV S +R D +++ ++ +KA DG+++ ++
Sbjct: 132 EAHRMLEIGIKPVNQRYVHLSTTIEKSKEVAS-IRTDTPIVLEIDAKKAREDGIRIIKAN 190
Query: 268 NKVVLTEGFDGVVPVEYFEK 287
+ + L E +P +Y ++
Sbjct: 191 DLIALAEE----IPAKYIKR 206
>sp|Q2SQM5|KPTA_HAHCH Probable RNA 2'-phosphotransferase OS=Hahella chejuensis (strain
KCTC 2396) GN=kptA PE=3 SV=1
Length = 186
Score = 77.8 bits (190), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 57/189 (30%), Positives = 96/189 (50%), Gaps = 19/189 (10%)
Query: 104 ILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQRFSLL 163
+LRH + L + ++G+ +E LL + I L+ D+ E V ++KQRF+L
Sbjct: 15 VLRHQPELIQLPLDANGWADIEVLLAGAARQGVNISLQ-----DVLEIVATNDKQRFAL- 68
Query: 164 EENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESGLKRMKRL 223
+ IRA+QGH+I + + L P+ +E+ HG+ R D+IL +GL+ +R
Sbjct: 69 -SGDKRRIRASQGHSI---DVDLQLTPVTPPDEL---YHGSATRFTDAILATGLQPGQRR 121
Query: 224 HVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGFDGVVPVE 283
HVH S + T +V G R V+ ++ + G Y+S N+V LT+ VP +
Sbjct: 122 HVHLSADVETAHKV--GSRHGKPVIFRIDAKALTLAGHAFYLSANQVWLTDA----VPPQ 175
Query: 284 YFEKIESWP 292
Y +++ P
Sbjct: 176 YLSLLDTSP 184
>sp|Q8R5N7|KPTA_FUSNN Probable RNA 2'-phosphotransferase OS=Fusobacterium nucleatum
subsp. nucleatum (strain ATCC 25586 / CIP 101130 / JCM
8532 / LMG 13131) GN=kptA PE=3 SV=1
Length = 179
Score = 77.4 bits (189), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 98/180 (54%), Gaps = 18/180 (10%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWE-AVRKD 155
LGR ++ ILRH +NL + +G+ ++L++ K+ +I +I E V ++
Sbjct: 7 LGRFISLILRHKPETINLKLDKNGWANTKELIEKISKSGREIDF------EILERIVNEN 60
Query: 156 NKQRFSLLEENGELLIRANQGHTI-TTVESESLLKPILSAEEVSVCVHGTYKRNLDSILE 214
NK+R+S E+ + IRA QGH+I +E + ++ P ++ HGT + L+SI +
Sbjct: 61 NKKRYSFNEDKTK--IRAVQGHSIEVNLELKEVVPP-------AILYHGTAFKTLESIKK 111
Query: 215 SGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTE 274
G+K+M R HVH S + T + ++ +++ ++ L + K Y+S+NKV LT+
Sbjct: 112 EGIKKMSRQHVHLSADIET-AKNVATRHSGKYIILEIDTEAMLKENYKFYLSENKVWLTD 170
>sp|A5FLZ4|KPTA_FLAJ1 Probable RNA 2'-phosphotransferase OS=Flavobacterium johnsoniae
(strain ATCC 17061 / DSM 2064 / UW101) GN=kptA PE=3 SV=1
Length = 182
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 99/191 (51%), Gaps = 19/191 (9%)
Query: 96 ALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKD 155
++ + L+ +LRH ++ L + +G+ V +L++ K + L + +D + V +
Sbjct: 8 SISKFLSLVLRHSPEKIGLKLDENGWADVNELIEKCTKKGNR--LDAELLDYV---VENN 62
Query: 156 NKQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILES 215
+K+RF+ E+ + IRA+QGH+I S+ + E + HGT + ++SI +
Sbjct: 63 DKKRFAYNEDKTK--IRASQGHSI------SVELNLAETEPLEYLYHGTVGKFMESIQKE 114
Query: 216 GLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEG 275
GLK+M R HVH S T +V G RR V ++ + DG K Y+S+N V LT+
Sbjct: 115 GLKKMSRQHVHLSKDKETAVKV--GSRRGVPQILTVRSGAMYRDGFKFYLSENNVWLTDE 172
Query: 276 FDGVVPVEYFE 286
VP +Y E
Sbjct: 173 ----VPPKYIE 179
>sp|Q3M450|KPTA_ANAVT Probable RNA 2'-phosphotransferase OS=Anabaena variabilis (strain
ATCC 29413 / PCC 7937) GN=kptA PE=3 SV=1
Length = 182
Score = 74.7 bits (182), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/190 (30%), Positives = 89/190 (46%), Gaps = 19/190 (10%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ + L++ LRH L L + G+V V++LL Q P+ + D+ + V ++
Sbjct: 9 ISKFLSKHLRHTPERLGLVLAPGGWVAVDELLSACASH--QFPI---SRADLEQVVSNND 63
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
KQRFS E + IRANQGH++ + HGT ++++ +IL+SG
Sbjct: 64 KQRFSFDETATK--IRANQGHSVEVDLQLQ------PQLPPPILYHGTGEKSVPAILKSG 115
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
L +M R HVH S + T V G+R V+ ++ G Y SDN V L +
Sbjct: 116 LLKMSRHHVHLSKDIETARTV--GIRHGKPVIFSVDAMVMYQSGFTFYCSDNGVYLVDH- 172
Query: 277 DGVVPVEYFE 286
VP EY
Sbjct: 173 ---VPPEYLH 179
>sp|Q8U9Z2|KPTA_AGRT5 Probable RNA 2'-phosphotransferase OS=Agrobacterium tumefaciens
(strain C58 / ATCC 33970) GN=kptA PE=3 SV=1
Length = 186
Score = 74.3 bits (181), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 60/191 (31%), Positives = 91/191 (47%), Gaps = 21/191 (10%)
Query: 96 ALGRLLTRILRHMASELNLNMRSDGFVKVEDLL-KLNLKTFAQIPLRSHTVDDIWEAVRK 154
A + L+ +LRH + L + S G+ V DLL K N + PL + + V +
Sbjct: 4 ATSKFLSYVLRHAPESIGLVLDSQGWADVADLLAKANA---SGTPLDEAGLRAV---VAE 57
Query: 155 DNKQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILE 214
+K+RF+L E+ IRA QGH++ L +P + E HGT R L+ IL
Sbjct: 58 SDKKRFTLSEDGRR--IRAAQGHSVKV----DLGQPPV--EPPPQLFHGTATRFLEPILR 109
Query: 215 SGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTE 274
GL+ +R VH S T + G R V++ ++ + ADG + Y++DN V LT+
Sbjct: 110 EGLRPGERQQVHLSADRTT--ALAVGQRHGKPVVLIVDAGQMFADGCRFYLADNGVWLTD 167
Query: 275 GFDGVVPVEYF 285
VP Y
Sbjct: 168 ----AVPFSYL 174
>sp|Q87VZ5|KPTA_PSESM Probable RNA 2'-phosphotransferase OS=Pseudomonas syringae pv.
tomato (strain DC3000) GN=kptA PE=3 SV=1
Length = 187
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 96/202 (47%), Gaps = 24/202 (11%)
Query: 90 SKDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLL---KLNLKTFAQIPLRSHTVD 146
+K + D + +LL+ +LRH + L + DG+ +V++L+ N +F + L
Sbjct: 2 NKKQRDEISKLLSYVLRHAPESMGLTLDRDGWCEVDELVGKANANGHSFDRQALE----- 56
Query: 147 DIWEAVRKDNKQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYK 206
E V + K+RF+L E+ IRA QGH+ V+ + + K E + HGT
Sbjct: 57 ---EVVETNEKKRFTLSEDGQR--IRAAQGHSTEQVQVQHIEK-----EPPAWLYHGTAS 106
Query: 207 RNLDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYIS 266
R + SI GL R HVH + T V G R VL+ ++ + G++ + +
Sbjct: 107 RFMASIETQGLIAGSRHHVHLTEDPETALSV--GKRYGQPVLLAVDAKGMFEAGVQFFQA 164
Query: 267 DNKVVLTEGFDGVVPVEYFEKI 288
DN V L E VP+E+ K+
Sbjct: 165 DNGVWLVEA----VPIEWLTKV 182
>sp|Q7NVB8|KPTA_CHRVO Probable RNA 2'-phosphotransferase OS=Chromobacterium violaceum
(strain ATCC 12472 / DSM 30191 / JCM 1249 / NBRC 12614 /
NCIMB 9131 / NCTC 9757) GN=kptA PE=3 SV=2
Length = 195
Score = 73.9 bits (180), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 61/185 (32%), Positives = 89/185 (48%), Gaps = 20/185 (10%)
Query: 99 RLLTRILRHMASELNLNMRSDGFVKVEDLL-KLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157
R L+ +LRH + L + G+ + +LL +L K R+ + + V ++K
Sbjct: 22 RFLSLVLRHQPETIGLQLDDQGWADIGELLARLAAKG------RNLGRKQLEKIVLDNDK 75
Query: 158 QRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESGL 217
QRF++ E+ L IRANQGH+I + + E HGT R LD+IL GL
Sbjct: 76 QRFAISEDG--LRIRANQGHSIKIDLG------LAACEPPDRLYHGTASRFLDAILAEGL 127
Query: 218 KRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGFD 277
+ +R HVH S T +V G R V++ ++ R G+ Y SDN V L D
Sbjct: 128 RPGQRQHVHLSADGQTARKV--GARHGKPVVLEIDARAMRQAGLAFYRSDNGVWL---ID 182
Query: 278 GVVPV 282
GV PV
Sbjct: 183 GVPPV 187
>sp|A3DJX6|KPTA_CLOTH Probable RNA 2'-phosphotransferase OS=Clostridium thermocellum
(strain ATCC 27405 / DSM 1237) GN=kptA PE=3 SV=1
Length = 182
Score = 69.3 bits (168), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 94/191 (49%), Gaps = 22/191 (11%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
L + + LRH E L + ++G+V + LL + + H D+ + K +
Sbjct: 9 LSKEVAYALRHAPWEYGLELDAEGWVDINQLLSSLHECEKWKKVSEH---DLHVMIEKSD 65
Query: 157 KQRFSLLEENGELLIRANQGHTITT-VESESLLKPILSAEEVSVCVHGTYKRNLDSILES 215
K+R+ + NG+ IRA GH+I + E P V HGT +R + SI E
Sbjct: 66 KKRYEI--SNGK--IRALYGHSIPQRIIKEQKCPP-------EVLYHGTARRFVKSIKEK 114
Query: 216 GLKRMKRLHVHFSCGLPTDGEVISGMRRDVN-VLIFLNVRKALADGMKLYISDNKVVLTE 274
GL+ R +VH S + T +V G RRD+ VL+ +N +A ++G+K Y+ ++KV L +
Sbjct: 115 GLQPQGRQYVHLSADVETALQV--GKRRDIKPVLLIVNALEAWSEGIKFYLGNDKVWLAD 172
Query: 275 GFDGVVPVEYF 285
+P +Y
Sbjct: 173 A----IPSKYI 179
>sp|Q7UEP2|KPTA_RHOBA Probable RNA 2'-phosphotransferase OS=Rhodopirellula baltica
(strain SH1) GN=kptA PE=3 SV=1
Length = 184
Score = 67.8 bits (164), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/187 (29%), Positives = 92/187 (49%), Gaps = 18/187 (9%)
Query: 99 RLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQ 158
+ L+ +LRH + + + G+++++ L+ N T + T++ I E V ++K+
Sbjct: 12 KFLSLVLRHQPGVIGMTLDEQGWLEIDGLIA-NANTRG----KKLTLELIHEVVATNDKK 66
Query: 159 RFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESGLK 218
RF +L ++G L IRA+QGH++ V+ + A + HGT L I E GL+
Sbjct: 67 RF-VLSDDG-LRIRASQGHSVAGVDLN-----LTEANPPATLYHGTVDAFLPRIREQGLQ 119
Query: 219 RMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGFDG 278
+ R HVH S T V G RR L+ + ++ DG Y+S+N+V L +
Sbjct: 120 KRSRNHVHLSADEATATNV--GSRRGKPKLLLIAAQRMHQDGHIFYLSENEVWLVDS--- 174
Query: 279 VVPVEYF 285
VP Y
Sbjct: 175 -VPPTYL 180
>sp|Q395F2|KPTA_BURS3 Probable RNA 2'-phosphotransferase OS=Burkholderia sp. (strain 383)
GN=kptA PE=3 SV=1
Length = 194
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 95/194 (48%), Gaps = 18/194 (9%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ R L+ +LRH + L + +G+ +++L+ + + L T++ + ++
Sbjct: 16 ISRTLSYLLRHAPQTIGLQLDPEGWADIDELIAGIARQ--GLHLDRATLETV---CATND 70
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
KQRF+L ++ IRA QGH+ V+ +A+ HGT R LDSI G
Sbjct: 71 KQRFALSDDGRR--IRAVQGHSTPVVQRR-----YPAAQPPERLYHGTATRFLDSIRAQG 123
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
LK R HVH S + T V G R V V++ ++ ++ G ++++N V LT+
Sbjct: 124 LKPGARHHVHLSPDIRTALAV--GTRYGVPVILEVDAQRMHRQGHTFFVAENGVWLTD-- 179
Query: 277 DGVVPVEYFEKIES 290
VP E+ ++++
Sbjct: 180 --TVPAEFLKEMDQ 191
>sp|Q48DQ3|KPTA_PSE14 Probable RNA 2'-phosphotransferase OS=Pseudomonas syringae pv.
phaseolicola (strain 1448A / Race 6) GN=kptA PE=3 SV=1
Length = 188
Score = 67.4 bits (163), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/187 (28%), Positives = 89/187 (47%), Gaps = 16/187 (8%)
Query: 90 SKDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLL-KLNLKTFAQIPLRSHTVDDI 148
+K + D + +LL+ +LRH + L + DG+ +V+DL+ K N +A +
Sbjct: 2 NKKQRDEISKLLSYLLRHAPESMGLTLDRDGWSEVDDLIRKANAHGYA------FDRQAL 55
Query: 149 WEAVRKDNKQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRN 208
E V + K+RF+L E++ IRA QGH+ V+ + K E + HGT R
Sbjct: 56 NEVVETNEKKRFTLSEDDQR--IRAAQGHSTVQVQVQHAEK-----EPPATLYHGTASRF 108
Query: 209 LDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDN 268
+ SI GL R HVH + T V G R VL+ ++ + G++ + +DN
Sbjct: 109 MTSIETQGLIAGSRHHVHLTEDPETAMSV--GKRYGQPVLLAVDAKGMFEAGVRFFQADN 166
Query: 269 KVVLTEG 275
+ L +
Sbjct: 167 GIWLVKA 173
>sp|A2BMI7|KPTA_HYPBU Probable RNA 2'-phosphotransferase OS=Hyperthermus butylicus
(strain DSM 5456 / JCM 9403) GN=kptA PE=3 SV=1
Length = 233
Score = 65.5 bits (158), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/184 (30%), Positives = 84/184 (45%), Gaps = 19/184 (10%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLK------LNLKTFAQIPLRSHTVDDIWE 150
L +L+T +LRH+ E L + G+V +++L++ N + + T D +
Sbjct: 36 LSKLMTTLLRHLPHEAGLRLDPQGWVGIDELVRGIRERWRNRHLYQWV-----TRDHVIA 90
Query: 151 AVRKDNKQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLD 210
D K RF L G IRA GHT V E +P+ E HGT NL
Sbjct: 91 VALLDPKGRFQLDLARGR--IRAAYGHT---VRVELGYRPLSMDELPDKLYHGTVAENLA 145
Query: 211 SILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALAD-GMKLYISDNK 269
SIL GLK M+RL VH + V +G R NV++ + + LA G+ +Y + +
Sbjct: 146 SILSEGLKPMRRLMVHMTTDY--SSAVETGRRHGPNVVVLVIDPRCLAKHGIPVYRASDT 203
Query: 270 VVLT 273
+ L
Sbjct: 204 IYLA 207
>sp|Q4K4C7|KPTA_PSEF5 Probable RNA 2'-phosphotransferase OS=Pseudomonas fluorescens
(strain Pf-5 / ATCC BAA-477) GN=kptA PE=3 SV=1
Length = 182
Score = 64.7 bits (156), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 57/199 (28%), Positives = 97/199 (48%), Gaps = 18/199 (9%)
Query: 90 SKDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIW 149
SK I+ + L+ +LRH + L + S+G+ ++ L+ K Q+ + + I
Sbjct: 2 SKKVIEDTSKFLSYVLRHEPQAIGLELDSEGWGDIDALISGAAKNGRQL-----SRELIE 56
Query: 150 EAVRKDNKQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNL 209
V ++K+RF+L ++ IRA QGH+ V+ + + + + +V HGT R +
Sbjct: 57 LVVEGNDKKRFALSADSRR--IRAVQGHSNKAVQLQ-----LEAKQPPAVLFHGTATRFM 109
Query: 210 DSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNK 269
DSI E GL R HVH S + T V G R V++ ++ + A G Y ++N
Sbjct: 110 DSINEKGLIPGSRHHVHLSQEIDTARAV--GQRYGKVVILQIDAQAMQAQGFTFYQAENG 167
Query: 270 VVLTEGFDGVVPVEYFEKI 288
V LT+ VPV + + +
Sbjct: 168 VWLTDQ----VPVGFIKAL 182
>sp|Q63WX9|KPTA_BURPS Probable RNA 2'-phosphotransferase OS=Burkholderia pseudomallei
(strain K96243) GN=kptA PE=3 SV=1
Length = 184
Score = 64.7 bits (156), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 53/188 (28%), Positives = 89/188 (47%), Gaps = 19/188 (10%)
Query: 99 RLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQ 158
+ L+ +LRH + + + + G+ V +LL T A + T+D++ + V +++K+
Sbjct: 13 KFLSYVLRHRPDSIGVTLDAQGWADVSELL-----TKAAAAGMALTLDELKQVVAENDKK 67
Query: 159 RFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESGLK 218
RF L ++ IRA QGH++ L P+ + V HGT +++ I + GL
Sbjct: 68 RFVLNDDATR--IRAAQGHSVDV----DLQLPVKAPP--PVLYHGTVGKSMADIRKQGLT 119
Query: 219 RMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGFDG 278
M R VH S T V + RR V++ + L DG + +SDN V L
Sbjct: 120 PMNRHDVHLSPDRETATRVAT--RRGKPVILVIETYPLLRDGYQFRVSDNGVWLVPE--- 174
Query: 279 VVPVEYFE 286
VP +Y +
Sbjct: 175 -VPAKYIK 181
>sp|Q8U4K2|KPTA_PYRFU Probable RNA 2'-phosphotransferase OS=Pyrococcus furiosus (strain
ATCC 43587 / DSM 3638 / JCM 8422 / Vc1) GN=kptA PE=3
SV=2
Length = 183
Score = 64.3 bits (155), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 72/155 (46%), Gaps = 17/155 (10%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ +L+ ILRH E L +GFV++ DL++ + + T + I E V KD+
Sbjct: 10 VSKLMAYILRHSPWEFGLEPDEEGFVELADLIRAIKTVYPWV-----TEEFIKEIVEKDS 64
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
K R+ + IRA GH+ V E V HGT + NL IL+ G
Sbjct: 65 KGRYEIRGSK----IRARYGHSYPVVLKHE------EDTESKVLYHGTIRENLKGILKEG 114
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFL 251
+K MKR +VH S L + +G R +V++ L
Sbjct: 115 IKPMKRQYVHLS--LSYEDAYYTGRRHGKDVVVLL 147
>sp|Q6HH75|KPTA_BACHK Probable RNA 2'-phosphotransferase OS=Bacillus thuringiensis subsp.
konkukian (strain 97-27) GN=kptA PE=3 SV=1
Length = 185
Score = 63.2 bits (152), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 90/191 (47%), Gaps = 22/191 (11%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
L + ++ LRH + L + +G+V VE LL I R ++D+ + K
Sbjct: 10 LSKEVSYALRHAQWKYELELDENGWVSVEQLLH---ALHQSIEWRDVKIEDLKIMIEKSE 66
Query: 157 KQRFSLLEENGELLIRANQGHTIT-TVESESLLKPILSAEEVSVCVHGTYKRNLDSILES 215
K+R L E IRA GH+I + E + P HGT R L+SI +
Sbjct: 67 KKRHELKENK----IRALYGHSIPMKIVKEEGVPP-------EFLYHGTSPRFLNSIESN 115
Query: 216 GLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIF-LNVRKALADGMKLYISDNKVVLTE 274
GL M R +VH S + T E++ G R+D + +I +N KA +G+K Y+ + KV L +
Sbjct: 116 GLSPMSRQYVHLSEDIIT-AELV-GKRKDKHPIILEVNTGKAREEGVKFYLGNEKVWLAD 173
Query: 275 GFDGVVPVEYF 285
+P E+
Sbjct: 174 E----IPSEFI 180
>sp|O57899|KPTA_PYRHO Probable RNA 2'-phosphotransferase OS=Pyrococcus horikoshii (strain
ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=kptA PE=3 SV=1
Length = 177
Score = 62.8 bits (151), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 62/132 (46%), Gaps = 15/132 (11%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ +L+ ILRH E L +GFV +E+L+ K + + T + I E V +D
Sbjct: 5 VSKLMAYILRHSPWEFGLEPDEEGFVSIEELVNAVRKVYPWV-----TEEYIREIVERDE 59
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
K R+ + IRA GH+ + +E V HGT +RNL I+ G
Sbjct: 60 KGRYEIRGNK----IRARYGHSYPVILRHE------EDKESKVLYHGTVRRNLKGIMREG 109
Query: 217 LKRMKRLHVHFS 228
+K MKR +VH S
Sbjct: 110 IKPMKRQYVHLS 121
>sp|Q8ZSP2|KPTA_PYRAE Probable RNA 2'-phosphotransferase OS=Pyrobaculum aerophilum
(strain ATCC 51768 / IM2 / DSM 7523 / JCM 9630 / NBRC
100827) GN=kptA PE=3 SV=1
Length = 213
Score = 62.4 bits (150), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 93/197 (47%), Gaps = 23/197 (11%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ +LL+ LRH S L L++ G+ V K L+ + +R+ + ++ V D
Sbjct: 36 ISKLLSLALRHSPSVLGLSLDKGGWADV----KTALEGLRKAGIRA-DYEALYAVVALDE 90
Query: 157 KQRFSLLEENGELLIRANQGHTI-TTVESESLLKPILSAEEVSVCVHGTYKRNLDSILES 215
K RF L ++G+ IRA GHTI VE E+ E V HGT + L SI+
Sbjct: 91 KGRFEL--KDGK--IRARYGHTIDVEVEYEA-------DSESKVLYHGTSRHLLPSIMAQ 139
Query: 216 GLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEG 275
GL M+R +VH S T + + RR + V+I ++ A G +Y + KV L +
Sbjct: 140 GLLPMRRRYVHLSPDFATACQ--NARRRPLPVVIEIDAECLRARGYVVYAASGKVRLAKH 197
Query: 276 FDGVVPVEYFEKIESWP 292
VP E +K+ P
Sbjct: 198 ----VPPECLKKVVDCP 210
>sp|B1VP90|KPTA_STRGG Probable RNA 2'-phosphotransferase OS=Streptomyces griseus subsp.
griseus (strain JCM 4626 / NBRC 13350) GN=kptA PE=3 SV=1
Length = 189
Score = 61.6 bits (148), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 60/195 (30%), Positives = 91/195 (46%), Gaps = 31/195 (15%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLK---TFAQIPLRSHTVDDIWEAVR 153
+ + L++ LRH + L + +G+V VE+LL+ + F++ L D + V
Sbjct: 9 VSKYLSKHLRHQPERIGLTLDENGWVAVEELLRAAARHGFAFSRAEL-----DHV---VA 60
Query: 154 KDNKQRFSLLEENGELL-------IRANQGHTITTVESESLLKPILSAEEVSVCVHGTYK 206
++K+RF++ ENG IRANQGHT+ + L P AE + HGT
Sbjct: 61 ANDKRRFTV--ENGCAADGVHGDRIRANQGHTVAV---DLDLPP---AEPPAHLYHGTVA 112
Query: 207 RNLDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYIS 266
R +D+I GL+ M R HVH S T V G RR +++ ++ G +S
Sbjct: 113 RVMDAIRTEGLRPMARHHVHLSPDRETATRV--GARRGRPLVLTVDAGAMHRAGHVFRVS 170
Query: 267 DNKVVLTEGFDGVVP 281
N V L D V P
Sbjct: 171 ANGVWLA---DAVPP 182
>sp|B6YXF3|KPTA_THEON Probable RNA 2'-phosphotransferase OS=Thermococcus onnurineus
(strain NA1) GN=kptA PE=3 SV=1
Length = 180
Score = 61.2 bits (147), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 24/182 (13%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ +L+ ILRH E L +GFV + +L++ + + T + + E V +D
Sbjct: 8 VSKLMAYILRHSPEEFGLRPDVEGFVPLSELVEALKTIYPDV-----TEEFVREIVARDA 62
Query: 157 KQRFSLLEENGELLIRANQGHTI-TTVESESLLKPILSAEEVSVCVHGTYKRNLDSILES 215
K R+ + + IRA GH+ +++ E E HGT +RNL+SIL
Sbjct: 63 KGRYEIQGDR----IRARYGHSFPVSLDHEE-------DTESRFLYHGTPRRNLESILRE 111
Query: 216 GLKRMKRLHVHFSCGLPTDGEVISGMR---RDVNVLIFLNVRKALADGMKLYISDNKVVL 272
GLK M+R VH S + E I R RDV VL+ ++ G+K+Y + V +
Sbjct: 112 GLKPMRRQFVHLST---SKSEAIKTGRRHGRDV-VLLVIDAECLRKKGLKVYKAGKNVRI 167
Query: 273 TE 274
E
Sbjct: 168 VE 169
>sp|C6DJM6|KPTA_PECCP Probable RNA 2'-phosphotransferase OS=Pectobacterium carotovorum
subsp. carotovorum (strain PC1) GN=kptA PE=3 SV=1
Length = 186
Score = 60.5 bits (145), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/190 (27%), Positives = 84/190 (44%), Gaps = 18/190 (9%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ + L+ +LRH + L + S G+ + +L+ K R T + I V +
Sbjct: 9 VSKFLSYVLRHKPEAIGLTLNSGGWANIAELISCAAKDG-----RLLTREVIQSVVDNSD 63
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
K+RFS+ + L IRA QGH+ V+ +P + E HGT R +DSI + G
Sbjct: 64 KKRFSISADG--LSIRAAQGHSSAQVDMR--YEPKVPPE---FLYHGTATRFIDSINQQG 116
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
L+ R +VH S T + G R ++ + + G Y +DN V LT
Sbjct: 117 LRPGSRQYVHLSADEAT--AITVGQRHGKPTVLKIKTLEMHQQGFIFYQADNGVWLTL-- 172
Query: 277 DGVVPVEYFE 286
VPV + +
Sbjct: 173 --TVPVPFID 180
>sp|Q9V2B7|KPTA_PYRAB Probable RNA 2'-phosphotransferase OS=Pyrococcus abyssi (strain GE5
/ Orsay) GN=kptA PE=3 SV=1
Length = 183
Score = 59.7 bits (143), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 71/155 (45%), Gaps = 17/155 (10%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ +L+ ILRH NL +GFV +E+ + + + + T + I + V +D
Sbjct: 11 VSKLMAYILRHDPWSFNLQPDEEGFVDLEEFVNAIRRVYPWV-----TKEFILDIVERDE 65
Query: 157 KQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESG 216
K+R+ + E IRA GH+ + +E HGT + NL+ I+ G
Sbjct: 66 KERYEVKEGK----IRARYGHSYPVILDHK------EDKESKTLYHGTIRENLEGIMREG 115
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFL 251
+K MKR VH S L + +G R NV++ +
Sbjct: 116 IKPMKRQFVHLS--LNYEDAYNTGRRHGSNVVVLM 148
>sp|A6UXB5|KPTA_PSEA7 Probable RNA 2'-phosphotransferase OS=Pseudomonas aeruginosa
(strain PA7) GN=kptA PE=3 SV=1
Length = 182
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/199 (27%), Positives = 87/199 (43%), Gaps = 22/199 (11%)
Query: 91 KDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWE 150
+ +D R L+ +LRH + L + +G+ ++ L+ + R+ +
Sbjct: 3 RKTLDDTSRFLSHVLRHQPEAIGLTLDGEGWADIDALIAGAARDG-----RALDRALLGA 57
Query: 151 AVRKDNKQRFSLLEENGELLIRANQGHT--ITTVESESLLKPILSAEEVSVCVHGTYKRN 208
+R ++KQRF+ + IRA QGH+ + + P +V HGT +R
Sbjct: 58 VLRSNDKQRFAFSADGQR--IRAVQGHSHAAVAIAYAPAVPP-------AVLYHGTARRF 108
Query: 209 LDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDN 268
LDSI E GL R HVH S T EV G R VL+ ++ R G + ++N
Sbjct: 109 LDSIREHGLVPGSRHHVHLSARRATALEV--GRRYGSPVLLEVDARDMHLAGHLFHQAEN 166
Query: 269 KVVLTEGFDGVVPVEYFEK 287
V L G VPV + +
Sbjct: 167 GVWLA----GQVPVRFIRE 181
>sp|Q5JFX3|KPTA_PYRKO Probable RNA 2'-phosphotransferase OS=Pyrococcus kodakaraensis
(strain ATCC BAA-918 / JCM 12380 / KOD1) GN=kptA PE=3
SV=1
Length = 180
Score = 58.5 bits (140), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 81/179 (45%), Gaps = 18/179 (10%)
Query: 97 LGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156
+ +L+ ILRH E L +GFV + +L+ + ++ T + + E V D
Sbjct: 8 VSKLMAYILRHSPEEFGLRPDVEGFVSLNELVNALKTVYPEV-----TEEFVREIVENDP 62
Query: 157 KQRFSLLEENGELLIRANQGHTI-TTVESESLLKPILSAEEVSVCVHGTYKRNLDSILES 215
K R+ + + IRA GH+ +++ E E HGT +RNL SIL+
Sbjct: 63 KGRYEIRGDR----IRARYGHSFPVSLDHEE-------DTESRFLYHGTPRRNLPSILKE 111
Query: 216 GLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTE 274
GLK MKR +VH S E R+V VL+ ++ G K+Y + V + E
Sbjct: 112 GLKPMKRQYVHVSTDKIEALETGRRHGREV-VLLVIDAECLRKRGFKIYKAGKNVRIVE 169
>sp|Q9ZBX9|KPTA_STRCO Probable RNA 2'-phosphotransferase OS=Streptomyces coelicolor
(strain ATCC BAA-471 / A3(2) / M145) GN=kptA PE=3 SV=1
Length = 182
Score = 57.4 bits (137), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/196 (27%), Positives = 87/196 (44%), Gaps = 21/196 (10%)
Query: 90 SKDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIW 149
+++ + + L++ LRH + L G+V+++ L+ P +D +
Sbjct: 2 QQERTVKVSKYLSKHLRHQPERIGLTPDEGGWVEIDALVAAAAA--HGFPFTRQELDHV- 58
Query: 150 EAVRKDNKQRFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNL 209
V ++K+RF++ IRA+QGH+I L P+ A HGT R+L
Sbjct: 59 --VATNDKRRFAVEGTR----IRASQGHSIAV----DLRLPV--ATPPPYLYHGTVARHL 106
Query: 210 DSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNK 269
++I GL+ M R VH S T V G RR V++ ++ DG ++S N
Sbjct: 107 EAIRAEGLRPMNRHDVHLSPDRETATRV--GARRGRPVVLPVDAATMHRDGHVFHVSANG 164
Query: 270 VVLTEGFDGVVPVEYF 285
V LT+ VP Y
Sbjct: 165 VWLTQH----VPSRYL 176
>sp|Q02V26|KPTA_PSEAB Probable RNA 2'-phosphotransferase OS=Pseudomonas aeruginosa
(strain UCBPP-PA14) GN=kptA PE=3 SV=1
Length = 182
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 87/199 (43%), Gaps = 22/199 (11%)
Query: 91 KDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWE 150
+ +D + L+ +LRH + L + +G+ ++ L+ A R+ +
Sbjct: 3 RKTLDDTSKFLSYVLRHQPEAIGLKLDGEGWADIDALI-----AGAARDGRALDRALLGA 57
Query: 151 AVRKDNKQRFSLLEENGELLIRANQGHT--ITTVESESLLKPILSAEEVSVCVHGTYKRN 208
V ++K+RF+L + IRA QGH+ + + P +V HGT R
Sbjct: 58 VVENNDKKRFALSADGQR--IRAVQGHSHAAVAIAYAPAVPP-------AVLYHGTASRF 108
Query: 209 LDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDN 268
LDSI E GL R HVH S T EV G R VL+ ++ R G + ++N
Sbjct: 109 LDSIRERGLVPGSRHHVHLSARRATALEV--GRRYGSPVLLEIDARDMHLAGHLFHQAEN 166
Query: 269 KVVLTEGFDGVVPVEYFEK 287
V LTE VPV + +
Sbjct: 167 GVWLTE----RVPVRFIRE 181
>sp|Q9I778|KPTA_PSEAE Probable RNA 2'-phosphotransferase OS=Pseudomonas aeruginosa
(strain ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228)
GN=kptA PE=3 SV=1
Length = 182
Score = 55.1 bits (131), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 87/201 (43%), Gaps = 26/201 (12%)
Query: 91 KDKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIW- 149
+ +D + L+ +LRH + L + +G+ ++ L+ A +D +
Sbjct: 3 RKTLDDTSKFLSYVLRHQPEAIGLTLDGEGWADIDALI-------AGAARDGRALDRMLL 55
Query: 150 -EAVRKDNKQRFSLLEENGELLIRANQGHT--ITTVESESLLKPILSAEEVSVCVHGTYK 206
V ++K+RF+L + IRA QGH+ + + P +V HGT
Sbjct: 56 GAVVENNDKKRFALSADGQR--IRAVQGHSHAAVAIAYAPAVPP-------AVLYHGTAS 106
Query: 207 RNLDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYIS 266
R LDSI E GL R HVH S T EV G R VL+ ++ R G + +
Sbjct: 107 RFLDSIRERGLVPGSRHHVHLSARRATALEV--GRRYGSPVLLEIDARDMHLAGHLFHQA 164
Query: 267 DNKVVLTEGFDGVVPVEYFEK 287
+N V LTE VPV + +
Sbjct: 165 ENGVWLTE----RVPVRFIRE 181
>sp|Q8X261|KPTA_METKA Probable RNA 2'-phosphotransferase OS=Methanopyrus kandleri (strain
AV19 / DSM 6324 / JCM 9639 / NBRC 100938) GN=kptA PE=3
SV=1
Length = 234
Score = 55.1 bits (131), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 61/208 (29%), Positives = 96/208 (46%), Gaps = 26/208 (12%)
Query: 96 ALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSH----TVDDIWEA 151
AL +LL+ ILRH E+ + + +GF D+ +L + R + T + I
Sbjct: 37 ALSKLLSGILRHFPEEVKVKLDDEGFTDC-DVHELAERIKKYWKNREYYRWLTGEHIIAV 95
Query: 152 VRKDNKQRFSLLEENGELLIRANQGHTITTVESESLLKPIL-SAEEVSVCVHGTYKRNLD 210
V K RF + +E+G IRA GH+ ++P L AE V HGT + NL+
Sbjct: 96 VETCPKGRFEI-DEHGR--IRARYGHS-----RRLSVRPTLPEAENVKELYHGTARENLE 147
Query: 211 SILESGLKRMKRLHVHFSCGLPTDGE---VISGMRRDVN-VLIFLNVRKALADGMKLYIS 266
SIL+ G+K M R VH TD E +I+ +R N V++ ++ + G+ +
Sbjct: 148 SILQHGIKPMGRRAVHL-----TDDEREALITALRHTRNPVILVVDAERLRRHGLVPRKA 202
Query: 267 DNKVVLTEGFDGVVPVEYFEKIESWPDR 294
V + E G VP + ++ P R
Sbjct: 203 GKNVYVVE---GTVPPDCITRVIRNPRR 227
>sp|O28719|KPTA2_ARCFU Probable RNA 2'-phosphotransferase 2 OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=kptA2 PE=3 SV=1
Length = 216
Score = 53.1 bits (126), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 80/166 (48%), Gaps = 18/166 (10%)
Query: 99 RLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQ 158
+ L+ +LRH + + + DG+ ++ D+LK+ + + R H + V+ D K
Sbjct: 35 KFLSGLLRHFGRDFGVRLDEDGWAELRDVLKILSERYGVG--RKH----VELIVKFDPKG 88
Query: 159 RFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESGLK 218
RF L +NG IRA GH++ S E H T NL+SIL++GL
Sbjct: 89 RFEL--KNGR--IRAKYGHSVEVRTDWSE-----GGEIPEKLYHATSPENLNSILKTGLL 139
Query: 219 RMKRLHVHFSCGLPTDGEVISGMRRDVN-VLIFLNVRKALADGMKL 263
M+R VH C P + + G R N VL+ ++ + + DG+++
Sbjct: 140 PMRRREVHM-CSSPQEA-IEVGKRHSSNPVLLEIDAKGLMQDGIEV 183
>sp|B1LDT4|KPTA_ECOSM Probable RNA 2'-phosphotransferase OS=Escherichia coli (strain
SMS-3-5 / SECEC) GN=kptA PE=3 SV=1
Length = 194
Score = 52.8 bits (125), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 99 RLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQ 158
+ L+ +LRH + + + +G+ ++ L+ K A L +D + V +K+
Sbjct: 14 KFLSFVLRHKPESIGIVLDREGWADIDKLILCAQK--AGKRLTRALLDTV---VATSDKK 68
Query: 159 RFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEV--SVCVHGTYKRNLDSILESG 216
RFS + IRA QGH+ + V I AE+ HGT R LD I + G
Sbjct: 69 RFSYSSDG--RCIRAVQGHSTSQV-------AISFAEKTPPQFLYHGTASRFLDEIKKQG 119
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
L +R +VH S T +V G R V++ + ++ G+ + ++N V LT
Sbjct: 120 LIAGERHYVHLSADEATARKV--GARHGSPVILTVKAQEMAKRGLPFWQAENGVWLT--- 174
Query: 277 DGVVPVEYFEKIESWP 292
V VE+ E WP
Sbjct: 175 -STVAVEFLE----WP 185
>sp|Q46DV8|KPTA_METBF Probable RNA 2'-phosphotransferase OS=Methanosarcina barkeri
(strain Fusaro / DSM 804) GN=kptA PE=3 SV=1
Length = 207
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 91/203 (44%), Gaps = 29/203 (14%)
Query: 92 DKIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEA 151
+K + LGR ++ LRH + M G+V + D + K ++ + + ++
Sbjct: 30 NKEEKLGRFVSGTLRHFPESAGVTMDRFGWVNINDFCDVMRKRYSWM-----RKEYLYAL 84
Query: 152 VRKDNKQRFSLLEENGELLIRANQGHTITT----VESESLLKPILSAEEVSVCVHGTYKR 207
V D K R+ + IRA GH++ ES+S P L +G
Sbjct: 85 VESDEKGRYEIRNSR----IRARYGHSVNIDLDYRESDS---PYL--------YYGASPE 129
Query: 208 NLDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISD 267
+D +LE+G+ +K+ +VH S EV + + + V++ ++ KA DG+ L ++
Sbjct: 130 EVDVLLENGIFPIKQRYVHLSTSYEKAVEV-ALIHTENPVILQIDAFKAQEDGISLKLAT 188
Query: 268 NKVVLTEGFDGVVPVEYFEKIES 290
+ +VL E +P EY +E
Sbjct: 189 DDIVLAER----IPPEYLFVVEE 207
>sp|B7MMM2|KPTA_ECO45 Probable RNA 2'-phosphotransferase OS=Escherichia coli O45:K1
(strain S88 / ExPEC) GN=kptA PE=3 SV=1
Length = 194
Score = 52.0 bits (123), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 54/196 (27%), Positives = 87/196 (44%), Gaps = 26/196 (13%)
Query: 99 RLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQ 158
+ L+ +LRH + + + +G+ ++ L+ K A L +D + V +K+
Sbjct: 14 KFLSFVLRHKPEAIGIVLDREGWADIDKLILCAQK--AGKRLTRALLDTV---VATSDKK 68
Query: 159 RFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEV--SVCVHGTYKRNLDSILESG 216
RFS + IRA QGH+ + V I AE+ HGT R LD I + G
Sbjct: 69 RFSYSSDG--RCIRAVQGHSTSQVA-------ISFAEKTPPQFLYHGTASRFLDEIKKQG 119
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
L +R +VH S T +V G R V++ + ++ G+ + ++N V LT
Sbjct: 120 LIAGERHYVHLSADEATARKV--GARYGSPVILTVKAQEMAKRGIPFWQAENGVWLT--- 174
Query: 277 DGVVPVEYFEKIESWP 292
V VE+ E WP
Sbjct: 175 -STVAVEFLE----WP 185
>sp|C4ZT19|KPTA_ECOBW Probable RNA 2'-phosphotransferase OS=Escherichia coli (strain K12
/ MC4100 / BW2952) GN=kptA PE=3 SV=1
Length = 184
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 52/190 (27%), Positives = 86/190 (45%), Gaps = 22/190 (11%)
Query: 99 RLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQ 158
+ L+ +LRH + + + +G+ ++ L+ K A L +D + V +K+
Sbjct: 14 KFLSFVLRHKPEAIGIVLDREGWADIDKLILCAQK--AGKRLTRALLDTV---VATSDKK 68
Query: 159 RFSLLEENGELLIRANQGHTITTVESESLLKPILSAEEV--SVCVHGTYKRNLDSILESG 216
RFS + IRA QGH+ + V I AE+ HGT R LD I + G
Sbjct: 69 RFSYSSDG--RCIRAVQGHSTSQV-------AISFAEKTPPQFLYHGTASRFLDEIKKQG 119
Query: 217 LKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLTEGF 276
L +R +VH S T +V G R +V++ + ++ G+ + ++N V LT
Sbjct: 120 LIAGERHYVHLSADEATARKV--GARHGSSVILTVKAQEMAKRGLPFWQAENGVWLT--- 174
Query: 277 DGVVPVEYFE 286
V VE+ E
Sbjct: 175 -STVAVEFLE 183
>sp|Q8TH84|KPTA_METAC Probable RNA 2'-phosphotransferase OS=Methanosarcina acetivorans
(strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) GN=kptA
PE=3 SV=1
Length = 207
Score = 52.0 bits (123), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/197 (23%), Positives = 89/197 (45%), Gaps = 23/197 (11%)
Query: 95 DALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRK 154
+ LGR ++ LRH + + M G+V + + K + + + ++ V
Sbjct: 33 EKLGRFVSGTLRHFPASAGVKMDEYGWVDLNAFCDVMKKRYNWM-----RKEYLYALVES 87
Query: 155 DNKQRFSLLEENGELLIRANQGHTITT-VESESLLKPILSAEEVSVCVHGTYKRNLDSIL 213
D K R+ + G +IRA GH++ ++ E P + +G +D +L
Sbjct: 88 DEKGRYQI---RG-FMIRARYGHSVNIELDYEESDAPYV--------YYGASPEEVDVLL 135
Query: 214 ESGLKRMKRLHVHFSCGLPTDGEVISGMRRDVNVLIFLNVRKALADGMKLYISDNKVVLT 273
E+G+ +K+ +VH S EV + + + V++ ++ +A DG+ L ++ + +VL
Sbjct: 136 ENGIFPIKQRYVHLSTSYEKAAEV-ALIHTESPVILQVDAFRAQEDGISLKLATDYIVLA 194
Query: 274 EGFDGVVPVEYFEKIES 290
E +P EY IE
Sbjct: 195 EK----IPPEYLYVIEE 207
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.137 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 109,480,812
Number of Sequences: 539616
Number of extensions: 4573747
Number of successful extensions: 15248
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 39
Number of HSP's successfully gapped in prelim test: 61
Number of HSP's that attempted gapping in prelim test: 15073
Number of HSP's gapped (non-prelim): 146
length of query: 299
length of database: 191,569,459
effective HSP length: 117
effective length of query: 182
effective length of database: 128,434,387
effective search space: 23375058434
effective search space used: 23375058434
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)