Query 045972
Match_columns 299
No_of_seqs 172 out of 563
Neff 4.9
Searched_HMMs 29240
Date Mon Mar 25 12:48:22 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045972.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045972hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wfx_A Probable RNA 2'-phospho 100.0 5.3E-64 1.8E-68 445.3 15.0 185 93-297 1-186 (186)
2 2cqk_A C-MPL binding protein; 91.5 0.44 1.5E-05 38.0 6.5 53 116-178 41-94 (101)
3 1s29_A LA protein; winged heli 87.2 0.45 1.5E-05 37.3 3.4 49 117-174 40-88 (92)
4 4f0d_A PARP-16, poly [ADP-ribo 83.0 1.1 3.8E-05 41.6 4.5 34 199-232 147-186 (277)
5 2o0q_A Hypothetical protein CC 79.2 0.51 1.8E-05 38.3 0.7 89 199-292 3-100 (115)
6 2kpm_A Uncharacterized protein 79.2 2.2 7.6E-05 34.2 4.5 61 116-178 34-101 (105)
7 2x5y_A Zinc finger CCCH-type a 74.9 2.5 8.6E-05 35.8 3.9 21 198-218 60-80 (173)
8 2kzv_A Uncharacterized protein 74.8 4.4 0.00015 31.6 4.9 57 116-174 21-81 (92)
9 2pqf_A Poly [ADP-ribose] polym 72.8 3.5 0.00012 35.6 4.4 22 198-219 74-95 (198)
10 3smj_A Poly [ADP-ribose] polym 72.1 2.3 7.7E-05 36.9 3.0 22 198-219 70-91 (193)
11 3blj_A Poly(ADP-ribose) polyme 68.8 4.4 0.00015 35.8 4.2 22 198-219 98-119 (221)
12 3kjd_A Poly [ADP-ribose] polym 65.1 5.9 0.0002 38.0 4.5 23 198-220 213-235 (368)
13 3hkv_A PARP-10, poly [ADP-ribo 62.6 4.5 0.00016 35.9 3.0 22 198-219 76-97 (217)
14 1efy_A Poly (ADP-ribose) polym 58.5 5.6 0.00019 37.7 3.0 23 198-220 197-219 (350)
15 3c4h_A Poly(ADP-ribose) polyme 56.2 5.8 0.0002 37.6 2.7 33 198-230 205-243 (357)
16 4dqy_C Poly [ADP-ribose] polym 51.4 12 0.00042 37.3 4.3 22 198-219 342-363 (506)
17 2b1u_A Calmodulin-like protein 42.3 51 0.0017 21.6 5.2 38 115-157 16-53 (71)
18 2k9l_A RNA polymerase sigma fa 40.8 26 0.00088 25.7 3.6 29 115-153 40-70 (76)
19 1tiz_A Calmodulin-related prot 40.4 40 0.0014 21.8 4.3 38 115-157 11-48 (67)
20 1fi6_A EH domain protein REPS1 33.3 47 0.0016 24.1 4.1 35 114-155 18-52 (92)
21 1c07_A Protein (epidermal grow 32.6 50 0.0017 24.2 4.1 41 115-162 20-63 (95)
22 1s6j_A CDPK, calcium-dependent 32.5 61 0.0021 22.3 4.4 38 115-157 33-70 (87)
23 2ktg_A Calmodulin, putative; e 32.4 60 0.002 22.3 4.4 37 115-156 24-60 (85)
24 2kz2_A Calmodulin, CAM; TR2C, 32.2 51 0.0017 23.9 4.1 38 115-157 39-76 (94)
25 2kn2_A Calmodulin; S MAPK phos 31.0 60 0.002 22.7 4.2 37 115-156 19-55 (92)
26 2lv7_A Calcium-binding protein 30.0 31 0.001 26.0 2.6 38 115-157 46-83 (100)
27 2opo_A Polcalcin CHE A 3; calc 29.6 69 0.0024 22.0 4.3 37 115-157 21-57 (86)
28 2joj_A Centrin protein; N-term 29.3 53 0.0018 22.0 3.6 37 115-156 17-53 (77)
29 1qjt_A EH1, epidermal growth f 28.2 43 0.0015 25.0 3.1 59 115-180 21-84 (99)
30 1avs_A Troponin C; muscle cont 27.8 76 0.0026 22.2 4.3 36 116-156 31-66 (90)
31 2voo_A Lupus LA protein; RNA-b 27.6 48 0.0016 27.9 3.6 50 118-174 42-91 (193)
32 3u9h_A Tankyrase-2; protein-li 27.4 28 0.00097 31.1 2.3 21 198-220 105-125 (240)
33 2kgr_A Intersectin-1; structur 26.2 73 0.0025 24.2 4.2 35 115-156 24-58 (111)
34 2k9m_A RNA polymerase sigma fa 25.4 59 0.002 26.4 3.7 30 115-154 31-62 (130)
35 2pmy_A RAS and EF-hand domain- 25.3 84 0.0029 22.3 4.2 35 115-156 37-71 (91)
36 3fs7_A Parvalbumin, thymic; ca 25.1 89 0.003 22.5 4.3 41 115-157 52-92 (109)
37 1wlz_A DJBP, CAP-binding prote 24.7 78 0.0027 22.7 4.0 37 115-156 34-70 (105)
38 1pva_A Parvalbumin; calcium bi 24.7 91 0.0031 22.4 4.4 40 115-156 52-91 (110)
39 1c7v_A CAVP, calcium vector pr 24.4 69 0.0024 21.7 3.5 36 116-156 19-55 (81)
40 1k9u_A Polcalcin PHL P 7; poll 24.1 71 0.0024 21.5 3.5 35 116-156 14-48 (78)
41 3i5g_B Myosin regulatory light 24.0 78 0.0027 25.0 4.1 38 114-156 94-131 (153)
42 1b34_A Protein (small nuclear 23.7 17 0.00057 29.2 0.0 8 11-18 39-46 (119)
43 2pvb_A Protein (parvalbumin); 23.7 99 0.0034 22.1 4.4 40 115-156 51-90 (108)
44 2jq6_A EH domain-containing pr 23.7 81 0.0028 25.7 4.2 58 117-181 62-124 (139)
45 1j7q_A CAVP, calcium vector pr 23.3 1.1E+02 0.0039 20.9 4.5 36 116-156 25-63 (86)
46 2ovk_B RLC, myosin regulatory 22.9 88 0.003 23.6 4.1 39 114-157 94-132 (153)
47 2lmt_A Calmodulin-related prot 22.8 89 0.003 24.0 4.2 37 115-156 93-129 (148)
48 3fwb_A Cell division control p 22.5 1.1E+02 0.0039 22.9 4.7 38 115-157 106-143 (161)
49 3i5g_C Myosin catalytic light 22.3 98 0.0033 24.6 4.4 36 115-155 95-130 (159)
50 1h8b_A ACT-EF34, alpha-actinin 22.2 89 0.0031 22.7 3.8 29 116-156 20-48 (75)
51 2bl0_B Myosin regulatory light 22.1 1.1E+02 0.0039 22.5 4.5 37 115-156 86-122 (145)
52 2ovk_C Myosin catalytic light 21.8 1.2E+02 0.004 23.1 4.7 35 114-153 94-128 (159)
53 2obh_A Centrin-2; DNA repair c 21.7 98 0.0034 23.4 4.2 37 115-156 89-125 (143)
54 2mys_C Myosin; muscle protein, 21.6 1E+02 0.0035 22.8 4.2 37 115-157 95-131 (149)
55 2lhi_A Calmodulin, serine/thre 21.4 93 0.0032 25.1 4.2 35 115-154 94-128 (176)
56 2mys_B Myosin; muscle protein, 21.0 1.1E+02 0.0037 23.5 4.3 38 114-156 104-141 (166)
57 2d58_A Allograft inflammatory 20.9 1.2E+02 0.0042 22.0 4.4 38 114-156 41-78 (107)
58 5pal_A Parvalbumin; calcium-bi 20.2 93 0.0032 22.3 3.6 41 115-157 51-91 (109)
No 1
>1wfx_A Probable RNA 2'-phosphotransferase; tRNA splicing, NAD, structural GE riken structural genomics/proteomics initiative, RSGI; 2.80A {Aeropyrum pernix} SCOP: d.166.1.5
Probab=100.00 E-value=5.3e-64 Score=445.32 Aligned_cols=185 Identities=26% Similarity=0.374 Sum_probs=161.0
Q ss_pred hhhHHHHHHHHHhccCCCcCCceeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCCCceEEeecCCceEEE
Q 045972 93 KIDALGRLLTRILRHMASELNLNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQRFSLLEENGELLIR 172 (299)
Q Consensus 93 r~~~LSK~LSylLRH~pek~GL~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddKqRFel~~e~g~~~IR 172 (299)
|+++|||+|||+|||+|+++||+||+||||+|+|||+ +... .+++++|+++|++||++|+||||+|++ ++||
T Consensus 1 ~~~~lSK~LS~iLRH~p~~~gL~ld~~G~v~v~~LL~-~~~~---~~~~~~t~~~l~~vV~~~~K~Rf~l~~----~~IR 72 (186)
T 1wfx_A 1 MRVRLSKTLAGILRHHPGRYGVRLTREGWARVSEVVE-GLRK---AGWSWVEEWHIVGVALHDPKGRYELRN----GEIR 72 (186)
T ss_dssp --CCHHHHHHHHHHTCTGGGTCCCCTTCCEEHHHHHH-HHHH---TTCTTCCHHHHHHHHHHCSSCCEEEET----TEEE
T ss_pred ChhHHHHHHHHHhCCChhhcCCccCCCCCEEHHHHHh-hhhh---cccCCCCHHHHHHHHhcCCCCceEeec----cEEE
Confidence 4678999999999999999999999999999999999 4322 125689999999999999999999984 2899
Q ss_pred ecCCCcccccccccccccCCCCCCCCeEEEeCchhcHHHHHHhCCCCCCCcceEeccCCCCCCceeeeeeeC-CcEEEEE
Q 045972 173 ANQGHTITTVESESLLKPILSAEEVSVCVHGTYKRNLDSILESGLKRMKRLHVHFSCGLPTDGEVISGMRRD-VNVLIFL 251 (299)
Q Consensus 173 A~QGHSi~~v~~~~~L~pi~~~~~~~~LyHGT~~~~~~~I~~~GLk~M~R~hVHLs~~~~~a~~V~SG~R~~-~~VlI~I 251 (299)
|+||||++ |+.+ |++ .+.|++|||||+.++|++|+++||+||+|+|||||++.++ ++++|||++ +||+|+|
T Consensus 73 A~qGHSi~-V~~~--l~~---~~~P~~lyHGT~~~~~~~I~~~GL~~m~R~hVHLs~~~~~--a~~vG~R~~~~~V~i~I 144 (186)
T 1wfx_A 73 ARYGHSIP-VNVE--PLP---GEPPPILYHGTTEEALPLIMERGIMRGRRLKVHLTSSLED--AVSTGRRHGNLVAVLLV 144 (186)
T ss_dssp ESSCCSSC-CCCC--CCS---SCCCSEEEECCBGGGHHHHHHHCBCCCSSSSEEEESCHHH--HHHHHTTSSSSBEEEEE
T ss_pred eccCCCCc-cccc--CCc---CCCCCEEEEeCCHHHHHHHHHhCCCCCCCCEEEEecCCCC--CeEeeccCCCccEEEEE
Confidence 99999998 5543 433 2335699999999999999999999999999999999876 477899999 9999999
Q ss_pred ehHHHHhCCCeEEEeCCcEEEecCCCccccccceeeccccCCCCCc
Q 045972 252 NVRKALADGMKLYISDNKVVLTEGFDGVVPVEYFEKIESWPDRRPI 297 (299)
Q Consensus 252 D~~kA~~dGi~Fy~S~NgViLTeG~~G~IP~~yf~kv~~~~~~~~~ 297 (299)
|+++|++||++||+|+||||||+ .||++||+++++...|..|
T Consensus 145 d~~~a~~~Gi~fy~s~ngV~Lt~----~VP~~y~~~v~~~~~~~~~ 186 (186)
T 1wfx_A 145 DVECLRRRGLKVERMSKTVYTVD----WVPPECIAEVRRESLGRSL 186 (186)
T ss_dssp EHHHHHHTTCCCEECSSSEEEES----CBCGGGEEEEEETTC----
T ss_pred cHHHHHhCCCEEEEeCCcEEEeC----CcCHHHheeccccCCCCcC
Confidence 99999999999999999999999 5999999999988877654
No 2
>2cqk_A C-MPL binding protein; LA domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.4.5.46
Probab=91.54 E-value=0.44 Score=38.05 Aligned_cols=53 Identities=23% Similarity=0.325 Sum_probs=38.1
Q ss_pred eCCCcceeHHHHHHhhh-hcccCCCCCCCCHHHHHHHHHhCCCCceEEeecCCceEEEecCCCc
Q 045972 116 MRSDGFVKVEDLLKLNL-KTFAQIPLRSHTVDDIWEAVRKDNKQRFSLLEENGELLIRANQGHT 178 (299)
Q Consensus 116 mD~dG~V~v~dLL~~~~-~~~~~~~~~~vt~edI~~VV~~ddKqRFel~~e~g~~~IRA~QGHS 178 (299)
||+||||+++.|+.... +.. .-+.+.|.++++..+. .|++++ + .+||-++...
T Consensus 41 md~~G~Vpl~~iasF~r~k~l------t~d~~~i~~al~~S~~--levsed-g-~kVRr~~~~~ 94 (101)
T 2cqk_A 41 MDSDQFIPIWTVANMEEIKKL------TTDPDLILEVLRSSPM--VQVDEK-G-EKVRPSHKRC 94 (101)
T ss_dssp SCTTSCEEHHHHHHCHHHHHH------CCCHHHHHHHHHHSSS--EEECSS-S-SEEEECCSCC
T ss_pred hhcCCCEEhHHHhCChHHHHH------cCCHHHHHHHHHhCCc--EEEcCC-C-CeeeeCCCCC
Confidence 58999999999998542 211 2477889999998864 677654 3 4899885443
No 3
>1s29_A LA protein; winged helix-turn-helix, autoantigen, RNA-binding, RNA binding protein; 1.60A {Trypanosoma brucei} SCOP: a.4.5.46
Probab=87.20 E-value=0.45 Score=37.27 Aligned_cols=49 Identities=33% Similarity=0.587 Sum_probs=33.8
Q ss_pred CCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCCCceEEeecCCceEEEec
Q 045972 117 RSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQRFSLLEENGELLIRAN 174 (299)
Q Consensus 117 D~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddKqRFel~~e~g~~~IRA~ 174 (299)
|+||||+++.|+....-+ --.-+.+.|.++++..++ .|+.++ | .+||-+
T Consensus 40 ~~~G~Vpl~~i~sF~r~k-----~lt~d~~~i~~al~~S~~--lev~ed-g-~~VRR~ 88 (92)
T 1s29_A 40 NAEGFVSLETLLTFKRVN-----SVTTDVKEVVEAIRPSEK--LVLSED-G-LMVRRR 88 (92)
T ss_dssp STTCCEEHHHHTTSHHHH-----TTCSCHHHHHHHHTTCSS--EEECTT-S-SEEEES
T ss_pred CCCCCEEhHHHhCChhHH-----HHcCCHHHHHHHHhhCCe--EEEeCC-C-CEEeCC
Confidence 789999999999854211 112357778888887755 677653 3 388866
No 4
>4f0d_A PARP-16, poly [ADP-ribose] polymerase 16; transferase, ARTD15, structural genomics structural genomics consortium, SGC; HET: 3AB; 2.70A {Homo sapiens}
Probab=83.00 E-value=1.1 Score=41.61 Aligned_cols=34 Identities=24% Similarity=0.312 Sum_probs=28.7
Q ss_pred eEEEeCchhcHHHHHHhCCCCC------CCcceEeccCCC
Q 045972 199 VCVHGTYKRNLDSILESGLKRM------KRLHVHFSCGLP 232 (299)
Q Consensus 199 ~LyHGT~~~~~~~I~~~GLk~M------~R~hVHLs~~~~ 232 (299)
++|||+..++|-+|+..||.-| -.+.|.||.+..
T Consensus 147 ~~~HGS~l~n~~sIL~~GL~~~~~~g~~fG~GiY~a~~~~ 186 (277)
T 4f0d_A 147 YAFHGSRLENFHSIIHNGLHCHLNKTSLFGEGTYLTSDLS 186 (277)
T ss_dssp EEEEECCGGGHHHHHHHCSCCC--CCCSSSCCEEEBSCHH
T ss_pred EEEcCCcHHHHHHHHhcccccCcccccccCCceEeecchH
Confidence 7999999999999999998654 356899988764
No 5
>2o0q_A Hypothetical protein CC0527; PSI, protein structure initiative, northeast structural genomics consortium, NESG, structural genomics; 1.80A {Caulobacter vibrioides} SCOP: d.166.1.7 PDB: 2jqn_A 2o0p_A
Probab=79.24 E-value=0.51 Score=38.33 Aligned_cols=89 Identities=13% Similarity=0.107 Sum_probs=60.7
Q ss_pred eEEEeCchhcHHHHHHhC-CCCCCC----cceEeccCCCCCCceeeeee----eCCcEEEEEehHHHHhCCCeEEEeCCc
Q 045972 199 VCVHGTYKRNLDSILESG-LKRMKR----LHVHFSCGLPTDGEVISGMR----RDVNVLIFLNVRKALADGMKLYISDNK 269 (299)
Q Consensus 199 ~LyHGT~~~~~~~I~~~G-Lk~M~R----~hVHLs~~~~~a~~V~SG~R----~~~~VlI~ID~~kA~~dGi~Fy~S~Ng 269 (299)
.+||=+..+.|+...+.| ..+..= -+||||+...- ..+ ..| .+.-+++.||..+ +.+.++|-.+.+|
T Consensus 3 ~Iy~I~~~~~W~~a~~~g~y~g~~ld~~dGFIH~St~~Qv-~~t--a~~~f~~~~~L~lL~id~~~-l~~~l~wE~~~~g 78 (115)
T 2o0q_A 3 LIYKILSRAEWDAAKAQGRFEGSAVDLADGFIHLSAGEQA-QET--AAKWFRGQANLVLLAVEAEP-LGEDLKWEASRGG 78 (115)
T ss_dssp EEEEEEEHHHHHHHHHHTEECCCHHHHHHTSEECEEHHHH-HHH--HHHHCTTCCSEEEEEEESGG-GCTTEEEEECGGG
T ss_pred EEEEECCHHHHHHhHHcCCCCCccccccCCeEECCCHHHH-HHH--HHHHcCCCCCEEEEEEcHHH-CCCceEEecCCCC
Confidence 689999999999999999 554421 29999974321 111 111 2344688999986 6778999877655
Q ss_pred EEEecCCCccccccceeeccccC
Q 045972 270 VVLTEGFDGVVPVEYFEKIESWP 292 (299)
Q Consensus 270 ViLTeG~~G~IP~~yf~kv~~~~ 292 (299)
- |-+-.=|.||.+....|...+
T Consensus 79 ~-lFPHlYG~L~~~aV~~v~~~~ 100 (115)
T 2o0q_A 79 A-RFPHLYRPLLVSEVTREADLD 100 (115)
T ss_dssp C-EEEEESSCEEGGGEEEEEECC
T ss_pred C-cccccCCCCChHHeEEEEeee
Confidence 3 344445789988887776543
No 6
>2kpm_A Uncharacterized protein; methods development, structural genomics, PSI-2, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=79.20 E-value=2.2 Score=34.21 Aligned_cols=61 Identities=16% Similarity=0.168 Sum_probs=39.0
Q ss_pred eCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHh-CCCCceEEeec-C-----CceEEEecCCCc
Q 045972 116 MRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRK-DNKQRFSLLEE-N-----GELLIRANQGHT 178 (299)
Q Consensus 116 mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~-ddKqRFel~~e-~-----g~~~IRA~QGHS 178 (299)
-|+|||+.+.+|=+.+.+.+-...-+.+....|-++|+. .+ .||+... . ...+|||.--|-
T Consensus 34 ~dddGWa~Lg~vG~~L~k~~PdFDpRnYGy~kLs~Li~a~~~--~FEi~~r~~~~~~~~~vyvr~~~~~~ 101 (105)
T 2kpm_A 34 SDDAGWANLGNFGNYLNKLQPDFDSRLYGYKKLSDLVKARTD--LFVTEERQVPGSTQKALYLRAKLEHH 101 (105)
T ss_dssp BCTTSCEEHHHHHHHHHHHCTTCCGGGTTCSSHHHHHHHCTT--TEEEEEEECTTCSSEEEEEEECCCCC
T ss_pred cCCcCcEeHHHHHHHHHHhCcCCCccccCcccHHHHHHhhCC--cEEEEeecCCCCCceEEEEehhcccc
Confidence 478999999999886544211111133444567888888 43 5999752 1 247899987763
No 7
>2x5y_A Zinc finger CCCH-type antiviral protein 1; antiviral defense, immune system, transferase; 1.05A {Homo sapiens}
Probab=74.89 E-value=2.5 Score=35.79 Aligned_cols=21 Identities=14% Similarity=0.213 Sum_probs=19.6
Q ss_pred CeEEEeCchhcHHHHHHhCCC
Q 045972 198 SVCVHGTYKRNLDSILESGLK 218 (299)
Q Consensus 198 ~~LyHGT~~~~~~~I~~~GLk 218 (299)
-.|||||...+|..|+..|+.
T Consensus 60 ~~l~HGt~~~~~~~I~~~Gf~ 80 (173)
T 2x5y_A 60 KLLFYATSRAYVESICSNNFD 80 (173)
T ss_dssp EEEEEEEEGGGHHHHHHHCCC
T ss_pred EEEEecCCcccHHHHHHhCCC
Confidence 389999999999999999995
No 8
>2kzv_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, no structural genomics consortium, NESG; NMR {Chromobacterium violaceum}
Probab=74.85 E-value=4.4 Score=31.58 Aligned_cols=57 Identities=16% Similarity=0.151 Sum_probs=36.2
Q ss_pred eCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCCCceEEeecCC-c---eEEEec
Q 045972 116 MRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQRFSLLEENG-E---LLIRAN 174 (299)
Q Consensus 116 mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddKqRFel~~e~g-~---~~IRA~ 174 (299)
-|+|||+.+.+|=+.+.+.+....-+.+....|-++|+.. ..||+...++ . .+||..
T Consensus 21 ~dedGWa~Lg~vG~~i~k~~PdFD~RnYGy~kLs~Li~~~--~~fe~~~~~~~~~~~i~vR~~ 81 (92)
T 2kzv_A 21 ARDSGWAELSAVGSYLAKNDPSFDPRNWGHGRLSQMVKKL--DFLTVQESRNGSKLHSEIRLR 81 (92)
T ss_dssp TTTTSSCBHHHHHHHHHHHCTTCCTTTTCSSHHHHHHHTC--TTEEEEEEEETTEEEEEEEEC
T ss_pred cCCCCcEeHHHHHHHHHHhCcCCCccccCcccHHHHHHhc--CcEEEEEcCCCCceEEEEEeC
Confidence 4789999999998865443211112345566788899884 4699975322 2 566654
No 9
>2pqf_A Poly [ADP-ribose] polymerase 12; enzyme-inhibitor complex, catalytic fragment, structural GEN structural genomics consortium, SGC, transferase; HET: GAB CIT; 2.20A {Homo sapiens}
Probab=72.84 E-value=3.5 Score=35.62 Aligned_cols=22 Identities=23% Similarity=0.267 Sum_probs=20.0
Q ss_pred CeEEEeCchhcHHHHHHhCCCC
Q 045972 198 SVCVHGTYKRNLDSILESGLKR 219 (299)
Q Consensus 198 ~~LyHGT~~~~~~~I~~~GLk~ 219 (299)
..|||||...++..|+..|+.+
T Consensus 74 ~~LfHGt~~~~~~~I~~~Gf~~ 95 (198)
T 2pqf_A 74 RQLFHGTSAIFVDAICQQNFDW 95 (198)
T ss_dssp EEEEEECCGGGHHHHHHHCCCT
T ss_pred EEEEecCCHHHHHHHHHhCCCC
Confidence 3899999999999999999864
No 10
>3smj_A Poly [ADP-ribose] polymerase 14; diphtheria toxin like fold, transferase, NAD+, ADP-ribosylat transferase-transferase inhibitor complex; HET: FDR; 1.50A {Homo sapiens} PDB: 3goy_A* 3smi_A* 3se2_A* 4f1l_A* 4f1q_A*
Probab=72.10 E-value=2.3 Score=36.91 Aligned_cols=22 Identities=23% Similarity=0.386 Sum_probs=20.1
Q ss_pred CeEEEeCchhcHHHHHHhCCCC
Q 045972 198 SVCVHGTYKRNLDSILESGLKR 219 (299)
Q Consensus 198 ~~LyHGT~~~~~~~I~~~GLk~ 219 (299)
..|||||...+|..|++.|+.+
T Consensus 70 ~~L~HGt~~~~~~~I~~~Gf~~ 91 (193)
T 3smj_A 70 KQLFHGTDAGSVPHVNRNGFNR 91 (193)
T ss_dssp EEEEEEECGGGHHHHHHHTTCC
T ss_pred EEEEeCCCHHHHHHHHHcCCCC
Confidence 3899999999999999999864
No 11
>3blj_A Poly(ADP-ribose) polymerase 15; PARP, BAL-3, SGC, structural GE consortium, glycosyltransferase, NAD, nucleus; 2.20A {Homo sapiens} PDB: 3gey_A*
Probab=68.81 E-value=4.4 Score=35.77 Aligned_cols=22 Identities=23% Similarity=0.419 Sum_probs=20.3
Q ss_pred CeEEEeCchhcHHHHHHhCCCC
Q 045972 198 SVCVHGTYKRNLDSILESGLKR 219 (299)
Q Consensus 198 ~~LyHGT~~~~~~~I~~~GLk~ 219 (299)
.+|||||...++..|+..|+.+
T Consensus 98 ~lLfHGt~~~~~~~I~~~Gf~~ 119 (221)
T 3blj_A 98 RLLFHGTDADSVPYVNQHGFNR 119 (221)
T ss_dssp EEEEEEECGGGHHHHHHHCCCT
T ss_pred EEEeccCChHHHHHHHHhCCCC
Confidence 3899999999999999999975
No 12
>3kjd_A Poly [ADP-ribose] polymerase 2; transferase, enzyme-inhibitor complex, catalytic fragment, S genomics, structural genomics consortium, SGC; HET: 78P; 1.95A {Homo sapiens} PDB: 3kcz_A* 1gs0_A
Probab=65.12 E-value=5.9 Score=38.03 Aligned_cols=23 Identities=30% Similarity=0.375 Sum_probs=20.8
Q ss_pred CeEEEeCchhcHHHHHHhCCCCC
Q 045972 198 SVCVHGTYKRNLDSILESGLKRM 220 (299)
Q Consensus 198 ~~LyHGT~~~~~~~I~~~GLk~M 220 (299)
.+|||||...+|..|+..|+..+
T Consensus 213 ~lLwHGT~~~n~~~Il~~Gf~~~ 235 (368)
T 3kjd_A 213 MLLWHGSRMSNWVGILSHGLRIA 235 (368)
T ss_dssp EEEEEECCGGGHHHHHHHCSCCC
T ss_pred eEEEeCCCHHHHHHHHHcCCCcc
Confidence 38999999999999999998763
No 13
>3hkv_A PARP-10, poly [ADP-ribose] polymerase 10; NAD, transferase, structural genomics, structural genomics consortium, SGC, cytoplasm, glycosyltransferase; HET: 3AB; 2.10A {Homo sapiens}
Probab=62.56 E-value=4.5 Score=35.92 Aligned_cols=22 Identities=32% Similarity=0.465 Sum_probs=19.9
Q ss_pred CeEEEeCchhcHHHHHHhCCCC
Q 045972 198 SVCVHGTYKRNLDSILESGLKR 219 (299)
Q Consensus 198 ~~LyHGT~~~~~~~I~~~GLk~ 219 (299)
..|||||...++..|+..|+.+
T Consensus 76 ~~LfHGt~~~~~~~I~~~GF~~ 97 (217)
T 3hkv_A 76 QVLYHGTTAPAVPDICAHGFNR 97 (217)
T ss_dssp EEEEEEECGGGHHHHHHHCSCT
T ss_pred EEEEeCCCHHHHHHHHhcCCcc
Confidence 3899999999999999999863
No 14
>1efy_A Poly (ADP-ribose) polymerase; benzimidazole, inhibitor, catalytic fragment, transferase; HET: BZC; 2.20A {Gallus gallus} SCOP: a.41.1.1 d.166.1.2 PDB: 1a26_A* 1pax_A* 2paw_A 2pax_A* 3pax_A* 4pax_A* 2rcw_A* 1uk1_A* 1wok_A* 1uk0_A* 2rd6_A* 3gjw_A* 3gn7_A* 3l3l_A* 3l3m_A*
Probab=58.46 E-value=5.6 Score=37.68 Aligned_cols=23 Identities=30% Similarity=0.502 Sum_probs=20.7
Q ss_pred CeEEEeCchhcHHHHHHhCCCCC
Q 045972 198 SVCVHGTYKRNLDSILESGLKRM 220 (299)
Q Consensus 198 ~~LyHGT~~~~~~~I~~~GLk~M 220 (299)
..|||||...+|..|+..|+..+
T Consensus 197 ~~L~HGt~~~n~~~Il~~Gf~~~ 219 (350)
T 1efy_A 197 QLLWHGSRTTNFAGILSQGLRIA 219 (350)
T ss_dssp EEEEEEECGGGHHHHHHHCSCCC
T ss_pred eEEEeCCchHHHHHHHHcCCCcc
Confidence 48999999999999999998753
No 15
>3c4h_A Poly(ADP-ribose) polymerase 3; enzyme-inhibitor complex, catalytic fragment, structural GEN structural genomics consortium, SGC; HET: DRL; 2.10A {Homo sapiens} PDB: 3c49_A* 2pa9_A* 3ce0_A* 3fhb_A*
Probab=56.19 E-value=5.8 Score=37.63 Aligned_cols=33 Identities=30% Similarity=0.389 Sum_probs=25.2
Q ss_pred CeEEEeCchhcHHHHHHhCCCCCC------CcceEeccC
Q 045972 198 SVCVHGTYKRNLDSILESGLKRMK------RLHVHFSCG 230 (299)
Q Consensus 198 ~~LyHGT~~~~~~~I~~~GLk~M~------R~hVHLs~~ 230 (299)
..|||||...+|..|+..|+..+. ..=|+||..
T Consensus 205 ~~LfHGt~~~~~~~I~~~Gf~~~~~~g~~fG~GiYfa~~ 243 (357)
T 3c4h_A 205 KLLWHGTNMAVVAAILTSGLRIMPHSGGRVGKGIYFASE 243 (357)
T ss_dssp EEEEEEECHHHHHHHHHHCSCCCTTCCCTTCSSEEEBSS
T ss_pred EEEEeCCChhhHHHHHHcCCcccCCCCCceECCEecCCc
Confidence 379999999999999999998532 224666543
No 16
>4dqy_C Poly [ADP-ribose] polymerase 1; PARP, poly(ADP-ribose) polymerase, DNA binding protein, ADP- transferase, PARP-like zinc finger, poly(ADP-ribosyl)ation; HET: DNA; 3.25A {Homo sapiens} PDB: 2cr9_A
Probab=51.45 E-value=12 Score=37.25 Aligned_cols=22 Identities=32% Similarity=0.529 Sum_probs=20.2
Q ss_pred CeEEEeCchhcHHHHHHhCCCC
Q 045972 198 SVCVHGTYKRNLDSILESGLKR 219 (299)
Q Consensus 198 ~~LyHGT~~~~~~~I~~~GLk~ 219 (299)
..|||||...+|..|+..||..
T Consensus 342 ~lL~HGT~~~n~~~Il~~Gf~~ 363 (506)
T 4dqy_C 342 RLLWHGSRTTNFAGILSQGLRI 363 (506)
T ss_dssp EEEEEECCTTTHHHHHHHCSCC
T ss_pred eEEecCCChHhHHHHHhcCCCc
Confidence 3899999999999999999874
No 17
>2b1u_A Calmodulin-like protein 5; CLSP, calmodulin-like SKIN protein, solution structure, backbone dynamic, structural genomics; NMR {Homo sapiens}
Probab=42.33 E-value=51 Score=21.62 Aligned_cols=38 Identities=13% Similarity=0.245 Sum_probs=28.5
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
..|.+|+++.+||...+..- ...++.+++..++..-++
T Consensus 16 D~d~~G~i~~~el~~~l~~~-----~~~~~~~~~~~~~~~~d~ 53 (71)
T 2b1u_A 16 DQDGDGHITVDELRRAMAGL-----GQPLPQEELDAMIREADV 53 (71)
T ss_dssp CCSSSSEEEHHHHHHHGGGT-----TCSSCHHHHHHHHHHCCS
T ss_pred CCCCCCcCcHHHHHHHHHHh-----CCCCCHHHHHHHHHHhCC
Confidence 46789999999999875321 135789999999886553
No 18
>2k9l_A RNA polymerase sigma factor RPON; protein, transcription; NMR {Aquifex aeolicus}
Probab=40.79 E-value=26 Score=25.74 Aligned_cols=29 Identities=17% Similarity=0.412 Sum_probs=21.8
Q ss_pred eeCCCcce--eHHHHHHhhhhcccCCCCCCCCHHHHHHHHH
Q 045972 115 NMRSDGFV--KVEDLLKLNLKTFAQIPLRSHTVDDIWEAVR 153 (299)
Q Consensus 115 ~mD~dG~V--~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~ 153 (299)
.+|++||. ++++|...+ +++.+++.+|..
T Consensus 40 ~LD~~GYL~~~l~eia~~l----------~~~~~eve~vL~ 70 (76)
T 2k9l_A 40 YLNEKGFLSKSVEEISDVL----------RCSVEELEKVRQ 70 (76)
T ss_dssp HCTTSSTTCCCHHHHHHHH----------TSCHHHHHHHHH
T ss_pred hcCCCCCCCCCHHHHHHHc----------CCCHHHHHHHHH
Confidence 48999994 588888753 378888887765
No 19
>1tiz_A Calmodulin-related protein, putative; helix-turn-helix, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: a.39.1.5
Probab=40.43 E-value=40 Score=21.84 Aligned_cols=38 Identities=16% Similarity=0.215 Sum_probs=27.7
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
..|.+|+++.+||.+....- ...++.+++..++..-++
T Consensus 11 D~d~~G~i~~~el~~~l~~~-----~~~~~~~~~~~~~~~~D~ 48 (67)
T 1tiz_A 11 DKNKDGKLSLDEFREVALAF-----SPYFTQEDIVKFFEEIDV 48 (67)
T ss_dssp CTTSSSCEEHHHHHHHHHHT-----CTTSCHHHHHHHHHHHCC
T ss_pred CCCCCCcCcHHHHHHHHHHh-----CCCCCHHHHHHHHHHHCC
Confidence 35778999999999875431 134788999988876543
No 20
>1fi6_A EH domain protein REPS1; EPS15 homology domain, EF hand, calcium, RAS signal transduction, endocytosis/exocytosis complex; NMR {Mus musculus} SCOP: a.39.1.6
Probab=33.32 E-value=47 Score=24.11 Aligned_cols=35 Identities=9% Similarity=0.090 Sum_probs=26.0
Q ss_pred ceeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhC
Q 045972 114 LNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKD 155 (299)
Q Consensus 114 L~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~d 155 (299)
+..|.+|++..+||...+... +++.+++.+++..-
T Consensus 18 ~D~d~dG~I~~~el~~~l~~~-------g~~~~~~~~i~~~~ 52 (92)
T 1fi6_A 18 IQPDLNGFIPGSAAKEFFTKS-------KLPILELSHIWELS 52 (92)
T ss_dssp TCCSTTCEEEHHHHHHHHHHH-------SSCHHHHHHHHHHH
T ss_pred HCCCCCCcCcHHHHHHHHHHc-------CCCHHHHHHHHHHH
Confidence 346789999999998875321 37788888887753
No 21
>1c07_A Protein (epidermal growth factor receptor pathway substrate 15); calcium binding, signaling domain, NPF binding, FW binding, EF-hand, EH domain; NMR {Homo sapiens} SCOP: a.39.1.6
Probab=32.55 E-value=50 Score=24.18 Aligned_cols=41 Identities=17% Similarity=0.125 Sum_probs=28.5
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHh---CCCCceEE
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRK---DNKQRFSL 162 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~---ddKqRFel 162 (299)
..|.+|++..+||...+.. + +++.+++.+++.. |..++..+
T Consensus 20 D~d~dG~I~~~el~~~l~~------~-g~~~~~~~~i~~~~D~d~dG~i~~ 63 (95)
T 1c07_A 20 DKDMDGFVSGLEVREIFLK------T-GLPSTLLAHIWSLCDTKDCGKLSK 63 (95)
T ss_dssp CTTCSSEECHHHHHHHHHT------T-TCCHHHHHHHHHHHCTTCSSSEET
T ss_pred CCCCCCcEeHHHHHHHHHH------c-CCCHHHHHHHHHHHCCCCCCcCCH
Confidence 3578999999999887532 1 4788888888764 33455444
No 22
>1s6j_A CDPK, calcium-dependent protein kinase SK5; EF-hand, helix-loop-helix, calcium-binding, calmodulin superfamily, transferase, plant protein; NMR {Glycine max} SCOP: a.39.1.5
Probab=32.53 E-value=61 Score=22.33 Aligned_cols=38 Identities=8% Similarity=0.077 Sum_probs=28.1
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
..|.+|+++.+||...+..- ...++.+++.+++..-++
T Consensus 33 D~d~~G~i~~~el~~~l~~~-----~~~~~~~~~~~l~~~~d~ 70 (87)
T 1s6j_A 33 DTDNSGTITFDELKDGLKRV-----GSELMESEIKDLMDAADI 70 (87)
T ss_dssp CTTCSSCEEHHHHHHHHHTT-----TSSCCHHHHHHHHHHHCT
T ss_pred CCCCCCcCcHHHHHHHHHHh-----CCCCCHHHHHHHHHHhCC
Confidence 35788999999999875321 235789999999886543
No 23
>2ktg_A Calmodulin, putative; ehcam, Ca-binding protein, partially structured protein, CAM-like; NMR {Entamoeba histolytica} PDB: 2lc5_A
Probab=32.44 E-value=60 Score=22.26 Aligned_cols=37 Identities=19% Similarity=0.123 Sum_probs=27.2
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
..|.+|+++.+||...+..- ...++.+++.+++..-+
T Consensus 24 D~d~~G~i~~~el~~~l~~~-----g~~~~~~~~~~~~~~~d 60 (85)
T 2ktg_A 24 DKDNDNKLTAEELGTVMRAL-----GANPTKQKISEIVKDYD 60 (85)
T ss_dssp CTTCCSEEEHHHHHHHHHTT-----SSCCCHHHHHHHHHHHS
T ss_pred CCCCCCcCcHHHHHHHHHHh-----CCCCCHHHHHHHHHHhC
Confidence 35778999999999875321 13478899998887644
No 24
>2kz2_A Calmodulin, CAM; TR2C, metal binding protein; NMR {Gallus gallus}
Probab=32.17 E-value=51 Score=23.88 Aligned_cols=38 Identities=13% Similarity=0.263 Sum_probs=27.8
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
..|.+|++..+||.+.+..- ...++.+++.+++..-|+
T Consensus 39 D~d~~G~I~~~El~~~l~~~-----g~~~~~~e~~~l~~~~D~ 76 (94)
T 2kz2_A 39 DKDGNGYISAAELRHVMTNL-----GEKLTDEEVDEMIREADI 76 (94)
T ss_dssp CTTCCSCBCHHHHHHHHHHH-----TCCCCHHHHHHHHHHHCT
T ss_pred CCCCcCcCCHHHHHHHHHHh-----CCCCCHHHHHHHHHHhCC
Confidence 45788999999999875331 124789999999876443
No 25
>2kn2_A Calmodulin; S MAPK phosphatase 1, NTMKP1, tobacco MKP1, metal binding Pro; NMR {Glycine max}
Probab=31.02 E-value=60 Score=22.70 Aligned_cols=37 Identities=8% Similarity=0.299 Sum_probs=27.1
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
..|.+|+++.+||...+..- ...++.+++.+++..-+
T Consensus 19 D~d~~G~i~~~el~~~l~~~-----g~~~~~~~~~~l~~~~d 55 (92)
T 2kn2_A 19 DKDQNGYISASELRHVMINL-----GEKLTDEEVEQMIKEAD 55 (92)
T ss_dssp CTTCSSEECHHHHHHHHHHT-----TCCCCHHHHHHHHHHHC
T ss_pred CCCCCCeEcHHHHHHHHHHh-----CCCCCHHHHHHHHHHhC
Confidence 35778999999999875431 23478899998887643
No 26
>2lv7_A Calcium-binding protein 7; metal binding protein; NMR {Homo sapiens}
Probab=30.00 E-value=31 Score=26.00 Aligned_cols=38 Identities=8% Similarity=0.045 Sum_probs=27.0
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
-.|.+|+++.+||-+.+..- ...+|.++|+++++.-|+
T Consensus 46 D~d~~G~I~~~El~~~l~~l-----g~~~~~~ei~~l~~~~D~ 83 (100)
T 2lv7_A 46 DRDGNGFISKQELGTAMRSL-----GYMPNEVELEVIIQRLDM 83 (100)
T ss_dssp CSSCSSCBCHHHHHHHHHHH-----TCCCCTTTHHHHHHHHCS
T ss_pred cCCCCCcCCHHHHHHHHHHh-----CCCCCHHHHHHHHHHHCC
Confidence 56889999999998875321 124778888888775443
No 27
>2opo_A Polcalcin CHE A 3; calcium-binding protein, dimer, domain-swapping, EF-hand; 1.75A {Chenopodium album} SCOP: a.39.1.10 PDB: 1h4b_A
Probab=29.64 E-value=69 Score=22.03 Aligned_cols=37 Identities=16% Similarity=0.127 Sum_probs=27.3
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
..|.+|+++.+||...+..- . .++.+++.+++..-|+
T Consensus 21 D~d~~G~i~~~el~~~l~~~-----g-~~~~~~~~~~~~~~D~ 57 (86)
T 2opo_A 21 DTNGDGKISSSELGDALKTL-----G-SVTPDEVRRMMAEIDT 57 (86)
T ss_dssp CTTCSSEEEHHHHHHHHHTT-----T-TCCHHHHHHHHHHHCT
T ss_pred CCCCCCCcCHHHHHHHHHHc-----C-CCCHHHHHHHHHHhCC
Confidence 35778999999999875321 2 5788999988876543
No 28
>2joj_A Centrin protein; N-terminal domain, centrin solution structure, EF-hand calcium binding protein, cell cycle; NMR {Euplotes octocarinatus}
Probab=29.27 E-value=53 Score=21.99 Aligned_cols=37 Identities=11% Similarity=0.037 Sum_probs=26.9
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
..|.+|+++.+||...+..- ...++.+++..++..-+
T Consensus 17 D~d~~G~i~~~el~~~l~~~-----g~~~~~~~~~~~~~~~d 53 (77)
T 2joj_A 17 DTNKTGSIDYHELKVAMRAL-----GFDVKKPEILELMNEYD 53 (77)
T ss_dssp CCSSSSEEEHHHHHHHHHHH-----TCCCHHHHHHHHHHHHC
T ss_pred CCCCCCCCcHHHHHHHHHHh-----CCCCCHHHHHHHHHHHC
Confidence 35778999999999875431 12478888888887644
No 29
>1qjt_A EH1, epidermal growth factor receptor substrate substrate 15, EPS15; EH domain, EF-hand, solution structure, S100 protein; NMR {Mus musculus} SCOP: a.39.1.6
Probab=28.24 E-value=43 Score=25.05 Aligned_cols=59 Identities=17% Similarity=0.018 Sum_probs=36.2
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC---CCceEEeec-CC-ceEEEecCCCccc
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN---KQRFSLLEE-NG-ELLIRANQGHTIT 180 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd---KqRFel~~e-~g-~~~IRA~QGHSi~ 180 (299)
..|.+|++..+||.+.+.. .+++.+++.++++.-| .+...+.+= .- ...-.|.+|+.++
T Consensus 21 D~d~dG~Is~~el~~~l~~-------~~l~~~~l~~i~~~~D~d~dG~i~~~EF~~~~~~~~~~~~g~~~~ 84 (99)
T 1qjt_A 21 EAGNTGRVLALDAAAFLKK-------SGLPDLILGKIWDLADTDGKGVLSKQEFFVALRLVACAQNGLEVS 84 (99)
T ss_dssp CCTTSSCCCSHHHHHHHHT-------SSSCHHHHHHHHHHHCCSSSSSCCSHHHHHHHHHHHHHTTTCCSS
T ss_pred CCCCCCcCCHHHHHHHHHH-------cCCCHHHHHHHHHHHCCCCCCcCCHHHHHHHHHHHHHHHcCCCCC
Confidence 4577899999999987532 1478888888887543 333333210 00 0012477888775
No 30
>1avs_A Troponin C; muscle contraction, calcium-activated, E-F hand calcium-binding protein; 1.75A {Gallus gallus} SCOP: a.39.1.5 PDB: 1blq_A 1skt_A 1tnp_A 1tnq_A 1zac_A 1smg_A 1npq_A 1trf_A
Probab=27.78 E-value=76 Score=22.17 Aligned_cols=36 Identities=8% Similarity=0.067 Sum_probs=26.6
Q ss_pred eCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 116 MRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 116 mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
.|.+|++..+||...+..- ...++.+++.+++..-+
T Consensus 31 ~d~~G~i~~~el~~~l~~~-----g~~~~~~~~~~l~~~~D 66 (90)
T 1avs_A 31 ADGGGDISTKELGTVMRML-----GQNPTKEELDAIIEEVD 66 (90)
T ss_dssp TTCSSEECHHHHHHHHHHT-----TCCCCHHHHHHHHHHHC
T ss_pred CCCCCcCcHHHHHHHHHHh-----CCCCCHHHHHHHHHHhC
Confidence 5788999999999875431 12578899988887543
No 31
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=27.57 E-value=48 Score=27.90 Aligned_cols=50 Identities=26% Similarity=0.387 Sum_probs=34.2
Q ss_pred CCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCCCceEEeecCCceEEEec
Q 045972 118 SDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNKQRFSLLEENGELLIRAN 174 (299)
Q Consensus 118 ~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddKqRFel~~e~g~~~IRA~ 174 (299)
.+|||++..|+....-.. + .-+.+.|.+++....++-.++.++. ..||-.
T Consensus 42 ~~g~V~l~~i~sF~r~k~----l-~~d~~~I~~Al~~S~~~~lev~ed~--~~vrR~ 91 (193)
T 2voo_A 42 DEGWVPLEIMIKFNRLNR----L-TTDFNVIVEALSKSKAELMEISEDK--TKIRRS 91 (193)
T ss_dssp TTTCEEHHHHTTSHHHHH----H-CCCHHHHHHHHHTCSSCCEEECTTS--SEEEEC
T ss_pred cCCcEEeHHHhhhhHHHH----h-cCCHHHHHHHHhhcccceEEEeccc--ceEEec
Confidence 489999999997532110 1 2367889999988877778886532 367655
No 32
>3u9h_A Tankyrase-2; protein-ligand complex, diphtheria toxin like fold, transfer ribosylation; HET: SO4; 1.75A {Homo sapiens} PDB: 3kr8_A* 3kr7_A* 3p0n_A* 3p0p_A* 3p0q_A* 3mhj_A* 3u9y_A* 3ua9_A* 4avu_A* 4avw_A* 3mhk_A* 2rf5_A 3udd_A* 3uh2_A* 3uh4_A* 4dvi_A* 4hlh_A* 4hki_A* 4hkn_A* 4hl5_A* ...
Probab=27.41 E-value=28 Score=31.10 Aligned_cols=21 Identities=19% Similarity=0.447 Sum_probs=17.9
Q ss_pred CeEEEeCchhcHHHHHHhCCCCC
Q 045972 198 SVCVHGTYKRNLDSILESGLKRM 220 (299)
Q Consensus 198 ~~LyHGT~~~~~~~I~~~GLk~M 220 (299)
..|||||. ++..|++.|+.++
T Consensus 105 ~~LfHGt~--~~~~I~~~Gf~~~ 125 (240)
T 3u9h_A 105 RMLFHGSP--FVNAIIHKGFDER 125 (240)
T ss_dssp EEEEECCT--THHHHHHHCCCGG
T ss_pred EEEEechH--hHHHHHHcCCCcc
Confidence 38999997 6899999998764
No 33
>2kgr_A Intersectin-1; structure, alternative splicing, calcium, cell junction, cell projection, coiled coil, endocytosis, membrane, phosphoprotein; NMR {Homo sapiens}
Probab=26.25 E-value=73 Score=24.17 Aligned_cols=35 Identities=6% Similarity=0.023 Sum_probs=26.3
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
..|.+|+++.+||...+.. ..++.+++.+++..-|
T Consensus 24 D~d~dG~I~~~El~~~l~~-------~~~~~~~~~~i~~~~D 58 (111)
T 2kgr_A 24 DKTMSGHLTGPQARTILMQ-------SSLPQAQLASIWNLSD 58 (111)
T ss_dssp SCSSCCEEEHHHHHHHHHT-------TCCCHHHHHHHHHHHC
T ss_pred CCCCCCcCcHHHHHHHHHh-------CCCCHHHHHHHHHHHC
Confidence 3578999999999987531 2478888888876533
No 34
>2k9m_A RNA polymerase sigma factor RPON; core binding domain, transcription; NMR {Aquifex aeolicus}
Probab=25.42 E-value=59 Score=26.35 Aligned_cols=30 Identities=20% Similarity=0.433 Sum_probs=22.4
Q ss_pred eeCCCcce--eHHHHHHhhhhcccCCCCCCCCHHHHHHHHHh
Q 045972 115 NMRSDGFV--KVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRK 154 (299)
Q Consensus 115 ~mD~dG~V--~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ 154 (299)
.+|++||. +++++...+ +++.+++++|...
T Consensus 31 ~LD~~GYL~~~l~eia~~l----------~~~~~eve~vL~~ 62 (130)
T 2k9m_A 31 YLNEKGFLSKSVEEISDVL----------RCSVEELEKVRQK 62 (130)
T ss_dssp SBCTTSSBSSCHHHHHHHT----------TCCHHHHHHHHHH
T ss_pred hcCCCCCCCCCHHHHHHHc----------CCCHHHHHHHHHH
Confidence 48999995 578888753 3788888877664
No 35
>2pmy_A RAS and EF-hand domain-containing protein; rasef, calcium-binding domain, structural genomics, structural genomics consortium, SGC; 2.30A {Homo sapiens}
Probab=25.28 E-value=84 Score=22.31 Aligned_cols=35 Identities=14% Similarity=0.155 Sum_probs=26.2
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
..|.+|++..+||...+.. + +++.+++.+++..-|
T Consensus 37 D~d~~G~I~~~El~~~l~~------~-g~~~~~~~~~~~~~D 71 (91)
T 2pmy_A 37 DANRSGRLEREEFRALCTE------L-RVRPADAEAVFQRLD 71 (91)
T ss_dssp CTTCSSSEEHHHHHHHHHH------T-TCCHHHHHHHHHHHC
T ss_pred CCCCCCCCcHHHHHHHHHH------c-CcCHHHHHHHHHHhC
Confidence 3577999999999987532 1 378888888887544
No 36
>3fs7_A Parvalbumin, thymic; calcium-binding protein, EF-hand, acetylation, calcium, metal binding protein; 1.95A {Gallus gallus} SCOP: a.39.1.4 PDB: 2kqy_A
Probab=25.06 E-value=89 Score=22.45 Aligned_cols=41 Identities=15% Similarity=0.138 Sum_probs=27.6
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
..|.+|+++.+||.+.+..-. .....++.+++.+++..-|+
T Consensus 52 D~d~~G~i~~~el~~~l~~~~--~~~~~~~~~~~~~~~~~~D~ 92 (109)
T 3fs7_A 52 DQDKSGFIEEEELQLFLKNFS--SSARVLTSAETKAFLAAGDT 92 (109)
T ss_dssp STTCSSSBCHHHHHTTGGGTC--TTSCCCCHHHHHHHHHHHCT
T ss_pred CCCCCCeEeHHHHHHHHHHHh--cccccCCHHHHHHHHHHhCC
Confidence 457789999999988653210 00235789999988876443
No 37
>1wlz_A DJBP, CAP-binding protein complex interacting protein 1 isoform A; EF-hand like, unknown function; 1.60A {Homo sapiens} SCOP: a.39.1.7
Probab=24.75 E-value=78 Score=22.74 Aligned_cols=37 Identities=5% Similarity=-0.012 Sum_probs=27.6
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
..|.+|+++.+||...+... ...++.+++.+++..-+
T Consensus 34 D~d~~G~i~~~el~~~l~~~-----g~~~~~~e~~~l~~~~d 70 (105)
T 1wlz_A 34 DTMKTNTISREEFRAICNRR-----VQILTDEQFDRLWNEMP 70 (105)
T ss_dssp CTTCSSCBCHHHHHHHHHHH-----TCCCCHHHHHHHHTTSC
T ss_pred CCCCCCcCcHHHHHHHHHHh-----CCCCCHHHHHHHHHHcC
Confidence 45788999999999875331 12489999999987643
No 38
>1pva_A Parvalbumin; calcium binding; 1.65A {Esox lucius} SCOP: a.39.1.4 PDB: 2pas_A 3pat_A
Probab=24.74 E-value=91 Score=22.36 Aligned_cols=40 Identities=15% Similarity=0.127 Sum_probs=27.7
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
..|.+|+++.+||.+.+.... .....++.+++.+++..-+
T Consensus 52 D~d~~G~I~~~el~~~l~~~~--~~g~~~~~~~~~~~~~~~d 91 (110)
T 1pva_A 52 DADASGFIEEEELKFVLKSFA--ADGRDLTDAETKAFLKAAD 91 (110)
T ss_dssp CTTCSSSBCHHHHHTGGGGTC--TTCCCCCHHHHHHHHHHHC
T ss_pred CCCCCCcCcHHHHHHHHHHHh--hcCCCCCHHHHHHHHHHhC
Confidence 457899999999998754210 0013478999999887654
No 39
>1c7v_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1c7w_A
Probab=24.39 E-value=69 Score=21.75 Aligned_cols=36 Identities=17% Similarity=0.261 Sum_probs=26.7
Q ss_pred eCCCcceeHHHHHHhhhhcccCCCC-CCCCHHHHHHHHHhCC
Q 045972 116 MRSDGFVKVEDLLKLNLKTFAQIPL-RSHTVDDIWEAVRKDN 156 (299)
Q Consensus 116 mD~dG~V~v~dLL~~~~~~~~~~~~-~~vt~edI~~VV~~dd 156 (299)
.|.+|++..+||...+... . ..++.+++.+++..-+
T Consensus 19 ~d~~G~i~~~el~~~l~~~-----g~~~~~~~~~~~~~~~~D 55 (81)
T 1c7v_A 19 ANGDGVIDFDEFKFIMQKV-----GEEPLTDAEVEEAMKEAD 55 (81)
T ss_dssp CSGGGEECHHHHHHHSSTT-----TTCCCCHHHHHHHHHHHC
T ss_pred CCCCCcCCHHHHHHHHHHh-----CCCCCCHHHHHHHHHHhC
Confidence 5678999999999875321 1 3478999999887644
No 40
>1k9u_A Polcalcin PHL P 7; pollen allergen, calcium-binding, EF-hand, cross-reactivity; 1.75A {Phleum pratense} SCOP: a.39.1.10
Probab=24.14 E-value=71 Score=21.52 Aligned_cols=35 Identities=14% Similarity=0.181 Sum_probs=25.9
Q ss_pred eCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 116 MRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 116 mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
.|.+|+++.+||...+..- . .++.+++.+++..-+
T Consensus 14 ~~~~G~i~~~el~~~l~~~-----g-~~~~~~~~~~~~~~D 48 (78)
T 1k9u_A 14 TNGDGKISLSELTDALRTL-----G-STSADEVQRMMAEID 48 (78)
T ss_dssp TTCSSEECHHHHHHHHHHH-----H-TCCHHHHHHHHHHHC
T ss_pred CCCCCcCcHHHHHHHHHHh-----C-CCCHHHHHHHHHHhC
Confidence 4678999999999875321 1 478888888887544
No 41
>3i5g_B Myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_B 3i5h_B 3i5i_B
Probab=23.95 E-value=78 Score=25.04 Aligned_cols=38 Identities=13% Similarity=0.199 Sum_probs=28.7
Q ss_pred ceeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 114 LNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 114 L~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
+-.|.+||++.++|-+.+.. . ...+|.++|.+++..-|
T Consensus 94 fD~d~~G~I~~~el~~~l~~-~----g~~ls~~ei~~~~~~~D 131 (153)
T 3i5g_B 94 FDEDGQGFIPEDYLKDLLEN-M----GDNFSKEEIKNVWKDAP 131 (153)
T ss_dssp TCSSCSSCCCHHHHHHHHHS-S----SSCCCHHHHHHHHTTCC
T ss_pred cccCCCCeEeHHHHHHHHHH-c----CCcCCHHHHHHHHHHhC
Confidence 34688999999999887532 1 23589999999997643
No 42
>1b34_A Protein (small nuclear ribonucleoprotein SM D1); snRNP, splicing, spliceosome, core snRNP domain, systemi erythematosus, SLE, RNA binding protein; 2.50A {Homo sapiens} SCOP: b.38.1.1 PDB: 2y9a_B 2y9b_B 2y9c_B 2y9d_B 3cw1_B 3pgw_X* 3s6n_A
Probab=23.71 E-value=17 Score=29.22 Aligned_cols=8 Identities=13% Similarity=0.173 Sum_probs=3.2
Q ss_pred EEeeeeec
Q 045972 11 ILQCCHVY 18 (299)
Q Consensus 11 ~~~~~~~~ 18 (299)
+|.-|...
T Consensus 39 vL~d~~e~ 46 (119)
T 1b34_A 39 HLKAVKMT 46 (119)
T ss_dssp EEEEEEEE
T ss_pred EeccEEEe
Confidence 34444433
No 43
>2pvb_A Protein (parvalbumin); calcium binding protein, metal binding protein; 0.91A {Esox lucius} SCOP: a.39.1.4 PDB: 1pvb_A 2pal_A 1pal_A 3pal_A 4pal_A 4cpv_A 1cdp_A 5cpv_A 1b8r_A 1b9a_A 1b8l_A 1b8c_A 1a75_B 1a75_A
Probab=23.70 E-value=99 Score=22.14 Aligned_cols=40 Identities=13% Similarity=0.136 Sum_probs=27.3
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
..|.+|++..+||.+.+.... .....++.+++.+++..-+
T Consensus 51 D~d~~G~I~~~el~~~l~~~~--~~g~~~~~~~~~~~~~~~D 90 (108)
T 2pvb_A 51 DQDKSGFIEEDELKLFLQNFS--PSARALTDAETKAFLADGD 90 (108)
T ss_dssp CTTCSSSBCHHHHHTGGGGTC--TTSCCCCHHHHHHHHHHHC
T ss_pred CCCCCCcCCHHHHHHHHHHHh--ccCCCCCHHHHHHHHHHhC
Confidence 457789999999998753210 0012478999998887644
No 44
>2jq6_A EH domain-containing protein 1; metal binding protein; NMR {Homo sapiens} PDB: 2kff_A 2kfg_A 2kfh_A 2ksp_A
Probab=23.70 E-value=81 Score=25.74 Aligned_cols=58 Identities=14% Similarity=0.044 Sum_probs=36.4
Q ss_pred CCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC---CCceEEeec-CCceEE-EecCCCcccc
Q 045972 117 RSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN---KQRFSLLEE-NGELLI-RANQGHTITT 181 (299)
Q Consensus 117 D~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd---KqRFel~~e-~g~~~I-RA~QGHSi~~ 181 (299)
|.+|++..++|...+.+ .+++.++|.+|+..-| .++..+.+= .-...| ++.+|+.++.
T Consensus 62 d~dG~Is~~El~~~l~~-------~gl~~~el~~I~~~~D~d~dG~Ld~~EF~~am~li~~~~~G~~lP~ 124 (139)
T 2jq6_A 62 PVNGKITGANAKKEMVK-------SKLPNTVLGKIWKLADVDKDGLLDDEEFALANHLIKVKLEGHELPA 124 (139)
T ss_dssp CSSSEEEHHHHHHHHHH-------TTCCHHHHHHHHHHHCSSCCSEEEHHHHHHHHHHHHHHHTTSCCCS
T ss_pred CCCCeECHHHHHHHHHH-------hCcCHHHHHHHHHHhCCCCCCcCcHHHHHHHHHHHHHHHcCCCCCc
Confidence 78999999999987543 1478888888877543 444443210 000012 5678888764
No 45
>1j7q_A CAVP, calcium vector protein; EF-hand family, calcium binding protein, metal binding protein; NMR {Branchiostoma lanceolatum} SCOP: a.39.1.5 PDB: 1j7r_A
Probab=23.33 E-value=1.1e+02 Score=20.95 Aligned_cols=36 Identities=17% Similarity=0.202 Sum_probs=26.5
Q ss_pred eCCCcceeHHHHHHhhhhcccCCCCCCCCHHH---HHHHHHhCC
Q 045972 116 MRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDD---IWEAVRKDN 156 (299)
Q Consensus 116 mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~ed---I~~VV~~dd 156 (299)
.|.+|+++.+||...+..- ...++.++ +.+++..-+
T Consensus 25 ~d~~G~I~~~el~~~l~~~-----g~~~~~~~~~~~~~~~~~~d 63 (86)
T 1j7q_A 25 RNAENIAPVSDTMDMLTKL-----GQTYTKRETEAIMKEARGPK 63 (86)
T ss_dssp TTTTSCBCHHHHHHHHHHT-----SCCCSHHHHHHHHHHHHCSS
T ss_pred CCCCCcCcHHHHHHHHHHH-----cCCCCHHHHHHHHHHHHHhC
Confidence 4778999999998875321 13578889 999887543
No 46
>2ovk_B RLC, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_B 2ekw_B 2oy6_B* 3i5f_B* 3i5g_B 3i5h_B 3i5i_B
Probab=22.86 E-value=88 Score=23.64 Aligned_cols=39 Identities=13% Similarity=0.158 Sum_probs=29.4
Q ss_pred ceeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 114 LNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 114 L~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
+..|.+|+++.+||.+.+... ...++.+++.+++..-++
T Consensus 94 ~D~d~~G~I~~~el~~~l~~~-----g~~~~~~~~~~~~~~~d~ 132 (153)
T 2ovk_B 94 FDEDGQGFIPEDYLKDLLENM-----GDNFSKEEIKNVWKDAPL 132 (153)
T ss_dssp TCSSCSSCCCHHHHHHHHHHS-----SSCCCHHHHHHHHHHCCE
T ss_pred HCCCCCCeEcHHHHHHHHHHc-----CCCCCHHHHHHHHHHcCC
Confidence 356789999999999875431 235899999999987653
No 47
>2lmt_A Calmodulin-related protein 97A; spermatogenesis, metal binding protein; NMR {Drosophila melanogaster} PDB: 2lmu_A 2lmv_A
Probab=22.82 E-value=89 Score=23.97 Aligned_cols=37 Identities=22% Similarity=0.318 Sum_probs=27.3
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
-.|.+|+++.+||.+.+..- ...++.+++.+++..-|
T Consensus 93 D~d~~G~I~~~El~~~l~~~-----g~~~~~~e~~~l~~~~D 129 (148)
T 2lmt_A 93 DRDGDGFISPAELRFVMINL-----GEKVTDEEIDEMIREAD 129 (148)
T ss_dssp HSSCSSEECHHHHHHHHHHH-----TCCCCHHHHHHHHHHHC
T ss_pred CCCCcCcCcHHHHHHHHHHc-----CccccHHHHHHHHHHhC
Confidence 46889999999998765321 23588999998887644
No 48
>3fwb_A Cell division control protein 31; gene gating, complex, cell cycle, cell division, mitosis, MR transport, nuclear pore complex, nucleus, phosphoprotein; 2.50A {Saccharomyces cerevisiae} SCOP: a.39.1.5 PDB: 2gv5_A 2doq_A 3fwc_A
Probab=22.51 E-value=1.1e+02 Score=22.94 Aligned_cols=38 Identities=8% Similarity=0.150 Sum_probs=25.2
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
..|.+|++..+||.+.+..- ...++.+++..++..-++
T Consensus 106 D~d~~G~i~~~el~~~l~~~-----~~~~~~~~~~~~~~~~d~ 143 (161)
T 3fwb_A 106 DDDHTGKISIKNLRRVAKEL-----GETLTDEELRAMIEEFDL 143 (161)
T ss_dssp CTTCSSEECHHHHHHHHHHT-----TCCCCHHHHHHHHHTTCS
T ss_pred cCCCCCeEeHHHHHHHHHHh-----CCCCCHHHHHHHHHHhCC
Confidence 35677888888888765321 124788888888776543
No 49
>3i5g_C Myosin catalytic light chain LC-1, mantle muscle; rigor-like, squid, muscle myosin, contractIle protein; 2.60A {Todarodes pacificus} PDB: 3i5f_C 3i5h_C 3i5i_C
Probab=22.28 E-value=98 Score=24.62 Aligned_cols=36 Identities=8% Similarity=0.047 Sum_probs=27.3
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKD 155 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~d 155 (299)
-.|.+||++.++|-+.+.. . ...+|.+++.+++..-
T Consensus 95 D~d~~G~I~~~el~~~l~~-~----g~~ls~~e~~~l~~~~ 130 (159)
T 3i5g_C 95 DREGQGLISSAEIRNVLKM-L----GERITEDQCNDIFTFC 130 (159)
T ss_dssp CTTSSSEECHHHHHHHHHH-S----SSCCCHHHHHHHHHHT
T ss_pred hcCCCCcCcHHHHHHHHHH-h----CCCCCHHHHHHHHHHh
Confidence 3578899999999887532 1 2358999999999753
No 50
>1h8b_A ACT-EF34, alpha-actinin 2, skeletal muscle isoform; structural protein, Z-DISK structural complex; NMR {Homo sapiens} SCOP: a.39.1.7
Probab=22.21 E-value=89 Score=22.67 Aligned_cols=29 Identities=10% Similarity=0.158 Sum_probs=23.9
Q ss_pred eCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 116 MRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 116 mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
-|.+|||..++|-+. +|.+++.++++.-+
T Consensus 20 ~dg~G~It~~eLr~~------------lt~eevd~~i~~~d 48 (75)
T 1h8b_A 20 ASDKPYILAEELRRE------------LPPDQAQYCIKRMP 48 (75)
T ss_dssp TTSCSSBCHHHHHHH------------SCHHHHHHHHHHSC
T ss_pred hcCCCCcCHHHHHhc------------CCHHHHHHHHHhcC
Confidence 355899999999762 78999999999855
No 51
>2bl0_B Myosin regulatory light chain; muscle protein, slime mould, EF-hand; 1.75A {Physarum polycephalum}
Probab=22.08 E-value=1.1e+02 Score=22.47 Aligned_cols=37 Identities=16% Similarity=0.230 Sum_probs=26.1
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
..|.+|+++.+||.+.+... ...++.+++.+++..-+
T Consensus 86 D~d~~G~i~~~e~~~~l~~~-----g~~~~~~~~~~~~~~~d 122 (145)
T 2bl0_B 86 DKEGNGTIQEAELRQLLLNL-----GDALTSSEVEELMKEVS 122 (145)
T ss_dssp CSSSSSEEEHHHHHHHHHHS-----SSCCCHHHHHHHHTTCC
T ss_pred CCCCCCeEcHHHHHHHHHHc-----CCCCCHHHHHHHHHHcC
Confidence 45778999999998865321 12478888888887543
No 52
>2ovk_C Myosin catalytic light chain LC-1, mantle muscle, myosin regulatory light chain LC-2, mantle muscle; rigor-like, squid, contractIle protein; 2.60A {Todarodes pacificus} PDB: 2ekv_C 2ekw_C 2oy6_C* 3i5f_C* 3i5g_C 3i5h_C 3i5i_C
Probab=21.78 E-value=1.2e+02 Score=23.08 Aligned_cols=35 Identities=9% Similarity=0.098 Sum_probs=26.9
Q ss_pred ceeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHH
Q 045972 114 LNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVR 153 (299)
Q Consensus 114 L~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~ 153 (299)
+..|.+|++..+||.+.+... ...++.+++.+++.
T Consensus 94 ~D~d~~G~I~~~El~~~l~~~-----g~~~~~~~~~~~~~ 128 (159)
T 2ovk_C 94 FDREGQGLISSAEIRNVLKML-----GERITEDQCNDIFT 128 (159)
T ss_dssp TCTTSSSEECHHHHHHHHHHS-----SSCCCHHHHHHHHH
T ss_pred HCCCCCCcCcHHHHHHHHHHh-----CCCCCHHHHHHHHH
Confidence 345778999999999875431 23589999999998
No 53
>2obh_A Centrin-2; DNA repair complex EF hand superfamily protein-peptide compl cycle; 1.80A {Homo sapiens} SCOP: a.39.1.5 PDB: 3kf9_A 1m39_A 2a4j_A 2k2i_A 1oqp_A
Probab=21.70 E-value=98 Score=23.41 Aligned_cols=37 Identities=11% Similarity=0.229 Sum_probs=25.7
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
-.|.+|++..+||.+.+.. . ...++.+++.+++..-+
T Consensus 89 D~d~~G~I~~~el~~~l~~-~----g~~~~~~~~~~~~~~~D 125 (143)
T 2obh_A 89 DDDETGKISFKNLKRVAKE-L----GENLTDEELQEMIDEAD 125 (143)
T ss_dssp CTTCSSSBCHHHHHHHHHH-T----TCCCCHHHHHHHHHHHC
T ss_pred CCCCCCcCcHHHHHHHHHH-h----CCCCCHHHHHHHHHHhC
Confidence 4577899999998876432 1 12478888888886543
No 54
>2mys_C Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1m8q_C* 1mvw_C* 1o18_F* 1o19_C* 1o1a_C* 1o1b_C* 1o1c_C* 1o1d_C* 1o1e_C* 1o1f_C* 1o1g_C*
Probab=21.61 E-value=1e+02 Score=22.78 Aligned_cols=37 Identities=14% Similarity=0.142 Sum_probs=27.6
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
..|.+|++..++|.+.+... ...++.+++.+++.. ++
T Consensus 95 D~d~~G~i~~~el~~~l~~~-----g~~~~~~~~~~~~~~-d~ 131 (149)
T 2mys_C 95 DKEGNGTVMGAELRHVLATL-----GEKMTEEEVEELMKG-QE 131 (149)
T ss_pred CCCCCceEcHHHHHHHHHHh-----CCCCCHHHHHHHHhh-CC
Confidence 45788999999998875321 124889999999887 54
No 55
>2lhi_A Calmodulin, serine/threonine-protein phosphatase catalytic subunit A1; yeast calmodulin, CNA1, metal binding protein; NMR {Saccharomyces cerevisiae}
Probab=21.44 E-value=93 Score=25.14 Aligned_cols=35 Identities=14% Similarity=0.231 Sum_probs=26.8
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHh
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRK 154 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ 154 (299)
-.|.+||++.+||.+.+... ...+|.+++.++++.
T Consensus 94 D~d~~G~I~~~el~~~l~~~-----g~~~~~~ei~~l~~~ 128 (176)
T 2lhi_A 94 DKNGDGLISAAELKHVLTSI-----GEKLTDAEVDDMLRE 128 (176)
T ss_dssp CSSCSSSBCHHHHHHHHHTT-----TCCCCHHHHHHHHHH
T ss_pred CCCCCCcCcHHHHHHHHHHc-----CcccchHHHHHHHHh
Confidence 46889999999998875321 235899999988864
No 56
>2mys_B Myosin; muscle protein, motor protein; HET: MLY; 2.80A {Gallus gallus} SCOP: a.39.1.5 PDB: 1i84_U* 1m8q_B* 1mvw_B* 1o18_E* 1o19_B* 1o1a_B* 1o1b_B* 1o1c_B* 1o1d_B* 1o1e_B* 1o1f_B* 1o1g_B* 2w4a_B 2w4g_B 2w4h_B
Probab=20.95 E-value=1.1e+02 Score=23.46 Aligned_cols=38 Identities=18% Similarity=0.017 Sum_probs=27.8
Q ss_pred ceeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 114 LNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 114 L~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
+..|.+|+++.+||.+.+... ...++.+++.+++..-|
T Consensus 104 ~D~d~~G~I~~~el~~~l~~~-----g~~~~~~~~~~~~~~~D 141 (166)
T 2mys_B 104 LDPDGKGSIKKSFLEELLTTG-----GGRFTPEEIKNMWAAFP 141 (166)
T ss_pred hCCCCCcceeHHHHHHHHHHc-----CCCCCHHHHHHHHHhcC
Confidence 346788999999999875321 12478899999887644
No 57
>2d58_A Allograft inflammatory factor 1; EF-hand, metal binding protein; 1.90A {Homo sapiens}
Probab=20.90 E-value=1.2e+02 Score=21.99 Aligned_cols=38 Identities=11% Similarity=0.135 Sum_probs=27.9
Q ss_pred ceeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCC
Q 045972 114 LNMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDN 156 (299)
Q Consensus 114 L~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~dd 156 (299)
+..|.+|+++.+||...+..- ...++.+++.+++..-|
T Consensus 41 ~D~d~~G~I~~~el~~~l~~~-----g~~~~~~~~~~l~~~~D 78 (107)
T 2d58_A 41 FDLNGNGDIDIMSLKRMLEKL-----GVPKTHLELKKLIGEVS 78 (107)
T ss_dssp SCCCTTSCEEHHHHHHHHHHT-----TCCCCHHHHHHHHHHHC
T ss_pred HCCCCCCcCcHHHHHHHHHHh-----CCCCCHHHHHHHHHHhC
Confidence 346789999999999875431 13478999999887643
No 58
>5pal_A Parvalbumin; calcium-binding protein; 1.54A {Triakis semifasciata} SCOP: a.39.1.4
Probab=20.21 E-value=93 Score=22.33 Aligned_cols=41 Identities=12% Similarity=0.084 Sum_probs=27.5
Q ss_pred eeCCCcceeHHHHHHhhhhcccCCCCCCCCHHHHHHHHHhCCC
Q 045972 115 NMRSDGFVKVEDLLKLNLKTFAQIPLRSHTVDDIWEAVRKDNK 157 (299)
Q Consensus 115 ~mD~dG~V~v~dLL~~~~~~~~~~~~~~vt~edI~~VV~~ddK 157 (299)
..|.+|+++.+||.+.+..-. .....++.+++.+++..-|+
T Consensus 51 D~d~~G~i~~~el~~~l~~~~--~~g~~~~~~~~~~~~~~~D~ 91 (109)
T 5pal_A 51 DKDQSGFIEEEELKGVLKGFS--AHGRDLNDTETKALLAAGDS 91 (109)
T ss_dssp CTTCSSEECHHHHHTHHHHHC--TTCCCCCHHHHHHHHHHHCT
T ss_pred CCCCCCcCcHHHHHHHHHHHH--HcCCCCCHHHHHHHHHHhCC
Confidence 457889999999988653210 00235788999888876443
Done!