BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045977
(311 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 58/135 (42%), Gaps = 2/135 (1%)
Query: 38 FPPSPPALPIIGHSYLL--SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIF 95
+P S +LP++G L + + L ++YGP+ +R+G T V+V + +AKE+
Sbjct: 9 YPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVL 68
Query: 96 TTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIR 155
DF+ R + + G GA+W+ + L + + +KI
Sbjct: 69 IKKGKDFSGRPQMATLDIASNNRKGIAFADSGAHWQLHRRLAMATFALFKDGDQKLEKII 128
Query: 156 EQEIDRLLKSLIMKN 170
QEI L L N
Sbjct: 129 CQEISTLCDMLATHN 143
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 51.2 bits (121), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 45/103 (43%), Gaps = 3/103 (2%)
Query: 33 TKSYNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAK 92
T S PP P A P+IG++ + S LARRYG + QIR+G VV++
Sbjct: 5 TSSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIH 64
Query: 93 EIFTTHDLDFASRYEPCPSKYNIYDGS-GFVTGPYGAYWRFMK 134
+ FA R P + + + G G Y +W+ +
Sbjct: 65 QALVQQGSAFADR--PSFASFRVVSGGRSMAFGHYSEHWKVQR 105
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/76 (32%), Positives = 38/76 (50%)
Query: 30 KTFTKSYNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNAT 89
KT +K PP P P+IGH L +L ++++YG ++QIRIG + VV+S
Sbjct: 4 KTSSKGLKNPPGPWGWPLIGHMLTLGKNPHLALSRMSQQYGDVLQIRIGSTPVVVLSGLD 63
Query: 90 VAKEIFTTHDLDFASR 105
++ DF R
Sbjct: 64 TIRQALVRQGDDFKGR 79
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 47/171 (27%), Positives = 77/171 (45%), Gaps = 14/171 (8%)
Query: 30 KTFTKSYNFPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNA 88
KT +K PP P LPIIG+ + L K +P+S LA+R+GP+ + +G VV+
Sbjct: 4 KTSSKG-KLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGY 62
Query: 89 TVAKEIFTTHDLDFASRYEPCPSKYNIYD-GSGFVTGPYGAYWRFMKHLCVTKLF---AG 144
KE + +F+ R + P+ + D G F GP W+ ++ +T L G
Sbjct: 63 KAVKEALLDYKDEFSGRGD-LPAFHAHRDRGIIFNNGP---TWKDIRRFSLTTLRNYGMG 118
Query: 145 PQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFR 195
Q ++ R Q L + K + P +G N+ +++FR
Sbjct: 119 KQG----NESRIQREAHFLLEALRKTQGQPFDPTFLIGCAPCNVIADILFR 165
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 66/159 (41%), Gaps = 8/159 (5%)
Query: 39 PPSPPALPIIGHSYLLSS-KLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTT 97
PP P LP IG+ L++ ++ SL ++ RYGP+ I +GP VV+ KE
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVKEALVD 71
Query: 98 HDLDFASRYEPCPSKYNIYDGSG--FVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIR 155
+F+ R E + ++ G G F G R + G + I+ R
Sbjct: 72 QAEEFSGRGEQATFDW-LFKGYGVAFSNGERAKQLRRFSIATLRGFGVGKRGIEE----R 126
Query: 156 EQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIF 194
QE L + + P L V+N+ ++++F
Sbjct: 127 IQEEAGFLIDALRGTHGANIDPTFFLSRTVSNVISSIVF 165
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 39 PPSPPALPIIGHSYLLSS-KLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTT 97
PP P LP IG+ L++ ++ SL ++ RYGP+ I +GP VV+ +E
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 98 HDLDFASRYEPCPSKYNIYDGSGFV 122
+F+ R E + ++ G G V
Sbjct: 72 QAEEFSGRGEQATFDW-VFKGYGVV 95
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 39 PPSPPALPIIGHSYLLSS-KLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTT 97
PP P LP IG+ L++ ++ SL ++ RYGP+ I +GP VV+ +E
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 98 HDLDFASRYEPCPSKYNIYDGSGFV 122
+F+ R E + ++ G G V
Sbjct: 72 QAEEFSGRGEQATFDW-VFKGYGVV 95
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 39 PPSPPALPIIGHSYLLSS-KLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTT 97
PP P LP IG+ L++ ++ SL ++ RYGP+ I +GP VV+ +E
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 98 HDLDFASRYEPCPSKYNIYDGSGFV 122
+F+ R E + ++ G G V
Sbjct: 72 QAEEFSGRGEQATFDW-VFKGYGVV 95
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 39 PPSPPALPIIGHSYLLSS-KLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTT 97
PP P LP IG+ L++ ++ SL ++ RYGP+ I +GP VV+ +E
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 98 HDLDFASRYEPCPSKYNIYDGSGFV 122
+F+ R E + ++ G G V
Sbjct: 72 QAEEFSGRGEQATFDW-VFKGYGVV 95
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 2/85 (2%)
Query: 39 PPSPPALPIIGHSYLLSS-KLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTT 97
PP P LP IG+ L++ ++ SL ++ RYGP+ I +GP VV+ +E
Sbjct: 12 PPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVD 71
Query: 98 HDLDFASRYEPCPSKYNIYDGSGFV 122
+F+ R E + ++ G G V
Sbjct: 72 QAEEFSGRGEQATFDW-VFKGYGVV 95
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/151 (24%), Positives = 58/151 (38%), Gaps = 11/151 (7%)
Query: 34 KSYNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKE 93
K PP P P++GH L +L +++RYG ++QIRIG + +V+S ++
Sbjct: 13 KGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQ 72
Query: 94 IFTTHDLDFASRYEPCPSKYN---IYDGSGFV----TGPYGAYWRFMKHLCVTKLFAGPQ 146
DF R P Y I DG +GP A R + +
Sbjct: 73 ALVRQGDDFKGR----PDLYTSTLITDGQSLTFSTDSGPVWAARRRLAQNALNTFSIASD 128
Query: 147 QIDRFDKIREQEIDRLLKSLIMKNYSEEGGP 177
E+ + + K+LI + GP
Sbjct: 129 PASSSSCYLEEHVSKEAKALISRLQELMAGP 159
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 45.4 bits (106), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 72/168 (42%), Gaps = 6/168 (3%)
Query: 30 KTFTKSYNFPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNA 88
KT + PP P LP+IG+ + K + +SL L++ YGP+ + G VV+
Sbjct: 4 KTSSGRGKLPPGPTPLPVIGNILQIDIKDVSKSLTNLSKIYGPVFTLYFGLERMVVLHGY 63
Query: 89 TVAKEIFTTHDLDFASR-YEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQ 147
V KE +F+ R + P + N G F G R + + G +
Sbjct: 64 EVVKEALIDLGEEFSGRGHFPLAERANRGFGIVFSNGKRWKEIRRFSLMTLRNFGMGKRS 123
Query: 148 IDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFR 195
I+ D+++E+ R L + K + P LG N+ ++IF+
Sbjct: 124 IE--DRVQEEA--RCLVEELRKTKASPCDPTFILGCAPCNVICSIIFQ 167
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/160 (23%), Positives = 67/160 (41%), Gaps = 9/160 (5%)
Query: 42 PPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLD 101
PP +P G +LL LP L +L ++ GP+ ++R+G VV+++ +E +D
Sbjct: 31 PPLVP--GFLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVD 88
Query: 102 FASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDR 161
FA R + K G Y W+ K L + L G + E +D+
Sbjct: 89 FAGRPQIPSYKLVSQRCQDISLGDYSLLWKAHKKLTRSALLLGTR------SSMEPWVDQ 142
Query: 162 LLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFRMIMNKK 201
L + + + G P + E + +T ++I + K
Sbjct: 143 LTQEFC-ERMRVQAGAPVTIQKEFSLLTCSIICYLTFGNK 181
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 43.9 bits (102), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 10/162 (6%)
Query: 38 FPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFT 96
PP P LPIIG+ + K + +S ++ YGP+ + G + VV KE
Sbjct: 11 LPPGPTPLPIIGNMLQIDVKDICKSFTNFSKVYGPVFTVYFGMNPIVVFHGYEAVKEALI 70
Query: 97 THDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKL--FA-GPQQIDRFDK 153
+ +F+ R P I G G ++ G W+ ++ +T L F G + I+ D+
Sbjct: 71 DNGEEFSGRGN-SPISQRITKGLGIISS-NGKRWKEIRRFSLTTLRNFGMGKRSIE--DR 126
Query: 154 IREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFR 195
++E+ L + K + P LG N+ +++F+
Sbjct: 127 VQEEA--HCLVEELRKTKASPCDPTFILGCAPCNVICSVVFQ 166
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/168 (25%), Positives = 66/168 (39%), Gaps = 6/168 (3%)
Query: 30 KTFTKSYNFPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNA 88
KT + PP P LP+IG+ + K + +SL L++ YGP+ + G VV+
Sbjct: 4 KTSSGRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGY 63
Query: 89 TVAKEIFTTHDLDFASR-YEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQ 147
KE +F+ R P + N G F G R + + G +
Sbjct: 64 EAVKEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRS 123
Query: 148 IDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFR 195
I+ R QE R L + K + P LG N+ ++IF
Sbjct: 124 IED----RVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFH 167
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 42.0 bits (97), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 65/165 (39%), Gaps = 6/165 (3%)
Query: 33 TKSYNFPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNATVA 91
T S PP P LP+IG+ + K + +SL L++ YGP+ + G VV+
Sbjct: 5 TSSKGRPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAV 64
Query: 92 KEIFTTHDLDFASR-YEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDR 150
KE +F+ R P + N G F G R + + G + I+
Sbjct: 65 KEALIDLGEEFSGRGIFPLAERANRGFGIVFSNGKKWKEIRRFSLMTLRNFGMGKRSIED 124
Query: 151 FDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFR 195
R QE R L + K + P LG N+ ++IF
Sbjct: 125 ----RVQEEARCLVEELRKTKASPCDPTFILGCAPCNVICSIIFH 165
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 41.6 bits (96), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 72/170 (42%), Gaps = 11/170 (6%)
Query: 30 KTFTKSYNFPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNA 88
KT +K PP P PIIG+ + +K + +SL + YGP+ + +G VV+
Sbjct: 4 KTSSKG-KLPPGPTPFPIIGNILQIDAKDISKSLTKFSECYGPVFTVYLGMKPTVVLHGY 62
Query: 89 TVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKL--FA-GP 145
KE +FA R P + G G + W+ M+ + L F G
Sbjct: 63 EAVKEALVDLGEEFAGRGS-VPILEKVSKGLG-IAFSNAKTWKEMRRFSLMTLRNFGMGK 120
Query: 146 QQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFR 195
+ I+ D+I+E+ R L + K + P LG N+ ++IF
Sbjct: 121 RSIE--DRIQEEA--RCLVEELRKTNASPCDPTFILGCAPCNVICSVIFH 166
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 35.0 bits (79), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 59 PESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDG 118
P L RR+G + +++ + VV++ +E TH D A R P P + G
Sbjct: 33 PYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADR-PPVPITQILGFG 91
Query: 119 ---SGFVTGPYGAYWRFMKHLCVTKL 141
G YG WR + V+ L
Sbjct: 92 PRSQGVFLARYGPAWREQRRFSVSTL 117
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 34.7 bits (78), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 35/86 (40%), Gaps = 4/86 (4%)
Query: 59 PESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDG 118
P L RR+G + +++ + VV++ +E TH D A R P P + G
Sbjct: 33 PYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADR-PPVPITQILGFG 91
Query: 119 ---SGFVTGPYGAYWRFMKHLCVTKL 141
G YG WR + V+ L
Sbjct: 92 PRSQGVFLARYGPAWREQRRFSVSTL 117
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 30 KTFTKSYNFPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNA 88
KT +K PP P LP++G+ + K L S L +YG + + +G VV+
Sbjct: 4 KTSSKG-KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 89 TVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKL 141
+E F+ R + I+ G G + G WR ++ + +
Sbjct: 63 DAIREALVDQAEAFSGRGKIAVVD-PIFQGYGVIFA-NGERWRALRRFSLATM 113
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 33.1 bits (74), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 30 KTFTKSYNFPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNA 88
KT +K PP P LP++G+ + K L S L +YG + + +G VV+
Sbjct: 4 KTSSKG-KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 89 TVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKL 141
+E F+ R + I+ G G + G WR ++ + +
Sbjct: 63 DAIREALVDQAEAFSGRGKIAVVD-PIFQGYGVIFA-NGERWRALRRFSLATM 113
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 30 KTFTKSYNFPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNA 88
KT +K PP P LP++G+ + K L S L +YG + + +G VV+
Sbjct: 4 KTSSKG-KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 89 TVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKL 141
+E F+ R + I+ G G + G WR ++ + +
Sbjct: 63 DAIREALVDQAEAFSGRGKIAVVD-PIFQGYGVIFA-NGERWRALRRFSLATM 113
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 32.7 bits (73), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 30 KTFTKSYNFPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNA 88
KT +K PP P LP++G+ + K L S L +YG + + +G VV+
Sbjct: 4 KTSSKG-KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 89 TVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKL 141
+E F+ R + I+ G G + G WR ++ + +
Sbjct: 63 DAIREALVDQAEAFSGRGKIAVVD-PIFQGYGVIFA-NGERWRALRRFSLATM 113
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 46/113 (40%), Gaps = 4/113 (3%)
Query: 30 KTFTKSYNFPPSPPALPIIGHSYLLSSK-LPESLQTLARRYGPLMQIRIGPSTYVVVSNA 88
KT +K PP P LP++G+ + K L S L +YG + + +G VV+
Sbjct: 4 KTSSKG-KLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGT 62
Query: 89 TVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKL 141
+E F+ R + I+ G G + G WR ++ + +
Sbjct: 63 DAIREALVDQAEAFSGRGKIAVVD-PIFQGYGVIFA-NGERWRALRRFSLATM 113
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 31.2 bits (69), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 15/61 (24%), Positives = 32/61 (52%), Gaps = 1/61 (1%)
Query: 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFA 103
+P++GH + L+ + P + + R +G +++I++GP T V+N + + D A
Sbjct: 30 GVPLLGHGWRLA-RDPLAFMSQLRDHGDVVRIKLGPKTVYAVTNPELTGALALNPDYHIA 88
Query: 104 S 104
Sbjct: 89 G 89
>pdb|3EPS|A Chain A, The Crystal Structure Of Isocitrate Dehydrogenase
KinasePHOSPHATASE From E. Coli
pdb|3EPS|B Chain B, The Crystal Structure Of Isocitrate Dehydrogenase
KinasePHOSPHATASE From E. Coli
Length = 578
Score = 27.7 bits (60), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 182 GTEVTNMTNNLIFRMIMNKKRISENEI---ENEAKMMRKLVVEMMGLAAKLGVSKVFSFR 238
++T++ ++ R + ++R+ I + E + +R + E +L + +F
Sbjct: 398 AEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGD 457
Query: 239 TKMDLHGIGKKLRDVFWRYDELLEKMMTDYED 270
G+ + R VF+ YDE+ ++ D
Sbjct: 458 MLFKNFGVTRHGRVVFYDYDEICYMTEVNFRD 489
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 27.7 bits (60), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 15/66 (22%), Positives = 28/66 (42%), Gaps = 4/66 (6%)
Query: 41 SPP----ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFT 96
SPP +P +GH+ E L+ +YGP+ + T+ + + A +F
Sbjct: 12 SPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFN 71
Query: 97 THDLDF 102
+ + D
Sbjct: 72 SKNEDL 77
>pdb|3LC6|A Chain A, The Alternative Conformation Structure Of Isocitrate
Dehydrogenase Kinase/phosphatase From E. Coli
pdb|3LC6|B Chain B, The Alternative Conformation Structure Of Isocitrate
Dehydrogenase Kinase/phosphatase From E. Coli
pdb|3LCB|A Chain A, The Crystal Structure Of Isocitrate Dehydrogenase
KinasePHOSPHATASE In Complex With Its Substrate,
Isocitrate Dehydrogenase, From Escherichia Coli.
pdb|3LCB|B Chain B, The Crystal Structure Of Isocitrate Dehydrogenase
KinasePHOSPHATASE In Complex With Its Substrate,
Isocitrate Dehydrogenase, From Escherichia Coli
Length = 578
Score = 27.7 bits (60), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 17/92 (18%), Positives = 40/92 (43%), Gaps = 3/92 (3%)
Query: 182 GTEVTNMTNNLIFRMIMNKKRISENEI---ENEAKMMRKLVVEMMGLAAKLGVSKVFSFR 238
++T++ ++ R + ++R+ I + E + +R + E +L + +F
Sbjct: 398 AEKITDLGEQIVIRHLYIERRMVPLNIWLEQVEGQQLRDAIEEYGNAIRQLAAANIFPGD 457
Query: 239 TKMDLHGIGKKLRDVFWRYDELLEKMMTDYED 270
G+ + R VF+ YDE+ ++ D
Sbjct: 458 MLFKNFGVTRHGRVVFYDYDEICYMTEVNFRD 489
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 27.7 bits (60), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 20/188 (10%)
Query: 50 HSYLLSSKLPES-LQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEP 108
+S SS+LP ++ ++ YG + + +G + VV++ V KE FA R P
Sbjct: 27 YSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR--P 84
Query: 109 C-PSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKL-FAGPQQIDRFDKIREQEIDRLLKSL 166
C P + G + YG W + L V + G Q KI E+ +
Sbjct: 85 CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEE--TKFFNDA 142
Query: 167 IMKNYSEEGGPPCNLGTEVTNM---TNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMM 223
I + Y G P + +TN NLI I ++ E + + + M +L E +
Sbjct: 143 I-ETYK---GRPFDFKQLITNAVSNITNLI---IFGERFTYE---DTDFQHMIELFSENV 192
Query: 224 GLAAKLGV 231
LAA V
Sbjct: 193 ELAASASV 200
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 27.3 bits (59), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 48/188 (25%), Positives = 76/188 (40%), Gaps = 20/188 (10%)
Query: 50 HSYLLSSKLPES-LQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEP 108
+S SS+LP ++ ++ YG + + +G + VV++ V KE FA R P
Sbjct: 27 YSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADR--P 84
Query: 109 C-PSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKL-FAGPQQIDRFDKIREQEIDRLLKSL 166
C P + G + YG W + L V + G Q KI E+ +
Sbjct: 85 CLPLFMKMTKMGGLLNSRYGRGWVDHRRLAVNSFRYFGYGQKSFESKILEE--TKFFNDA 142
Query: 167 IMKNYSEEGGPPCNLGTEVTNM---TNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMM 223
I + Y G P + +TN NLI I ++ E + + + M +L E +
Sbjct: 143 I-ETYK---GRPFDFKQLITNAVSNITNLI---IFGERFTYE---DTDFQHMIELFSENV 192
Query: 224 GLAAKLGV 231
LAA V
Sbjct: 193 ELAASASV 200
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.322 0.138 0.412
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,938,366
Number of Sequences: 62578
Number of extensions: 363232
Number of successful extensions: 937
Number of sequences better than 100.0: 31
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 14
Number of HSP's that attempted gapping in prelim test: 911
Number of HSP's gapped (non-prelim): 40
length of query: 311
length of database: 14,973,337
effective HSP length: 99
effective length of query: 212
effective length of database: 8,778,115
effective search space: 1860960380
effective search space used: 1860960380
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)