Query 045977
Match_columns 311
No_of_seqs 231 out of 1680
Neff 11.5
Searched_HMMs 29240
Date Mon Mar 25 12:52:31 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045977.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045977hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3swz_A Steroid 17-alpha-hydrox 100.0 3.2E-34 1.1E-38 247.8 24.7 262 34-310 5-278 (494)
2 3pm0_A Cypib1, cytochrome P450 100.0 6.6E-34 2.3E-38 246.7 22.1 265 34-310 6-284 (507)
3 2hi4_A Cytochrome P450 1A2; CY 100.0 4.2E-33 1.5E-37 240.7 22.2 263 34-310 13-287 (495)
4 3e6i_A CYPIIE1, P450-J, cytoch 100.0 3.7E-32 1.3E-36 234.0 25.1 259 33-310 6-272 (476)
5 3qz1_A Steroid 21-hydroxylase; 100.0 2E-33 6.8E-38 243.1 15.2 254 33-310 25-284 (496)
6 2fdv_A Cytochrome P450 2A6; CY 100.0 5.4E-32 1.9E-36 232.7 23.9 259 34-310 7-273 (476)
7 3czh_A Cytochrome P450 2R1; vi 100.0 3.1E-32 1.1E-36 234.4 22.2 261 34-310 9-278 (481)
8 3s79_A Cytochrome P450 19A1; o 100.0 3E-32 1E-36 236.1 20.2 254 34-310 42-300 (503)
9 1r9o_A Cytochrome P450 2C9; mo 100.0 1.2E-31 4.1E-36 230.7 23.6 259 34-310 8-274 (477)
10 1po5_A Cytochrome P450 2B4; ox 100.0 9.8E-32 3.4E-36 231.1 22.9 259 34-310 7-273 (476)
11 3k9v_A 1,25-dihydroxyvitamin D 100.0 2.7E-31 9.1E-36 229.0 19.4 260 29-310 16-288 (482)
12 3gw9_A Sterol 14alpha-demethyl 100.0 1.2E-31 4E-36 229.2 14.3 254 36-310 2-258 (450)
13 3tbg_A Cytochrome P450 2D6; mo 100.0 9.9E-30 3.4E-34 219.0 25.0 262 34-310 7-277 (479)
14 3nxu_A Cytochrome P450 3A4; al 100.0 7.8E-32 2.7E-36 232.4 11.5 258 36-310 13-277 (485)
15 3ld6_A Lanosterol 14-alpha dem 100.0 1.1E-31 3.9E-36 229.8 10.1 247 35-310 9-257 (461)
16 2ij2_A Cytochrome P450 BM3; mo 100.0 9.2E-30 3.1E-34 218.3 19.1 253 37-310 3-258 (470)
17 2ve3_A Putative cytochrome P45 100.0 5.3E-29 1.8E-33 212.2 16.1 242 32-310 7-248 (444)
18 3dbg_A Putative cytochrome P45 100.0 1.7E-29 5.9E-34 216.6 10.8 244 36-310 22-268 (467)
19 3i3k_A Lanosterol 14-alpha dem 100.0 1.5E-29 5.1E-34 216.8 10.4 249 33-310 7-257 (461)
20 2cib_A Cytochrome P450 51; hem 100.0 1E-28 3.5E-33 211.1 14.3 244 37-310 4-250 (455)
21 3n9y_A Cholesterol SIDE-chain 100.0 8.4E-28 2.9E-32 207.4 19.6 262 32-310 4-280 (487)
22 2cd8_A Cytochrome P450 monooxy 99.9 2E-26 6.8E-31 195.4 15.4 229 34-310 23-257 (436)
23 3awm_A Fatty acid alpha-hydrox 99.9 9.3E-25 3.2E-29 184.4 19.5 229 39-309 4-235 (415)
24 1izo_A P450bsbeta, cytochrome 99.9 7.9E-25 2.7E-29 184.9 18.8 226 45-309 8-236 (417)
25 3mdm_A Cholesterol 24-hydroxyl 99.9 6.4E-25 2.2E-29 187.8 18.0 235 55-310 9-248 (456)
26 3v8d_A Cholesterol 7-alpha-mon 99.9 2.6E-26 8.8E-31 198.2 8.6 248 33-310 9-262 (491)
27 1jfb_A Nitric-oxide reductase 99.9 7.9E-24 2.7E-28 178.1 19.9 227 38-310 2-234 (404)
28 1ued_A P450 OXYC, P450 monooxy 99.9 6.1E-24 2.1E-28 178.7 17.1 221 34-310 7-239 (406)
29 2zbx_A Cytochrome P450-SU1; be 99.9 5.1E-23 1.7E-27 173.4 19.8 225 36-310 4-238 (412)
30 1cpt_A Cytochrome P450-TERP; o 99.9 1.2E-23 4.2E-28 178.1 14.1 239 34-310 3-261 (428)
31 1s1f_A Putative cytochrome P45 99.9 2.4E-22 8.1E-27 169.0 18.8 221 37-310 8-236 (406)
32 3oo3_A OXY protein; cytochrome 99.9 8E-22 2.7E-26 164.8 18.5 206 55-310 11-220 (384)
33 3aba_A Cytochrome P450; oxidor 99.9 2E-21 6.9E-26 163.2 19.4 207 54-310 17-231 (403)
34 3abb_A CYP105D6, cytochrome P4 99.9 6.4E-22 2.2E-26 166.5 15.8 208 53-310 21-237 (408)
35 3ivy_A Cytochrome P450 CYP125; 99.9 1.7E-22 5.8E-27 171.2 12.2 230 35-310 16-262 (433)
36 2jjn_A Cytochrome P450 113A1; 99.9 2.6E-22 8.8E-27 169.1 12.9 225 28-310 10-235 (411)
37 3tkt_A Cytochrome P450; aromat 99.9 4.9E-22 1.7E-26 169.2 14.2 219 58-310 47-283 (450)
38 3dax_A Cytochrome P450 7A1; ch 99.9 1.6E-22 5.3E-27 174.6 10.6 246 34-309 10-261 (491)
39 3tyw_A Putative cytochrome P45 99.9 7.2E-21 2.5E-25 160.6 19.6 208 54-310 27-243 (417)
40 2zwu_A Camphor 5-monooxygenase 99.9 1.7E-21 5.8E-26 164.1 15.6 224 33-310 7-243 (415)
41 2wm5_A CYP124, putative cytoch 99.9 5.3E-21 1.8E-25 162.0 18.1 214 56-310 44-268 (435)
42 1odo_A Putative cytochrome P45 99.9 1.3E-21 4.5E-26 164.6 14.1 214 53-310 12-236 (408)
43 2y5n_A MYCG, P-450-like protei 99.9 6.4E-21 2.2E-25 160.6 17.8 209 54-310 35-248 (417)
44 1n97_A CYP175A1; electron tran 99.9 7.4E-23 2.5E-27 171.2 4.9 196 41-266 3-199 (389)
45 3b6h_A Prostacyclin synthase; 99.9 2E-21 7E-26 167.9 12.9 248 34-307 15-265 (498)
46 3a4g_A Vitamin D hydroxylase; 99.9 1.1E-20 3.9E-25 158.9 16.9 207 54-310 18-230 (411)
47 1z8o_A 6-deoxyerythronolide B 99.9 6.5E-21 2.2E-25 160.2 15.4 209 54-310 12-235 (404)
48 3ejb_B Biotin biosynthesis cyt 99.9 8.1E-21 2.8E-25 159.8 15.8 212 55-310 12-228 (404)
49 4fb2_A P450CIN; heme, monooxyg 99.9 6.8E-21 2.3E-25 159.8 15.0 207 54-310 17-226 (398)
50 2z36_A MOXA, cytochrome P450 t 99.9 2.8E-20 9.5E-25 156.6 17.2 224 34-310 4-239 (413)
51 1q5d_A P450 epoxidase; cytochr 99.8 7.7E-21 2.6E-25 160.5 13.2 214 54-310 24-248 (419)
52 2xkr_A CYP142, putative cytoch 99.8 3.2E-20 1.1E-24 155.8 16.6 207 55-310 17-224 (398)
53 2dkk_A Cytochrome P450; CYP158 99.8 1.4E-20 4.7E-25 158.3 14.4 206 55-310 26-239 (411)
54 3lxh_A Cytochrome P450; heme, 99.8 2.3E-20 7.7E-25 157.8 15.4 212 55-310 37-250 (421)
55 2uuq_A CYP130, cytochrome P450 99.8 5E-20 1.7E-24 155.1 16.5 209 55-310 24-244 (414)
56 2xbk_A PIMD protein; epoxidati 99.8 9.7E-20 3.3E-24 152.7 17.7 201 54-310 24-235 (404)
57 2z3t_A Cytochrome P450; monoxy 99.8 3.6E-20 1.2E-24 156.5 15.2 213 55-310 19-248 (425)
58 3r9b_A Cytochrome P450 164A2; 99.8 1.4E-20 4.8E-25 159.0 12.7 215 54-310 27-250 (418)
59 3dsk_A Cytochrome P450 74A, ch 99.8 1.9E-21 6.4E-26 168.0 7.4 165 33-204 24-205 (495)
60 3nc3_A Cytochrome P450 CYPX; c 99.8 2.4E-20 8.1E-25 158.3 13.9 211 55-310 52-263 (441)
61 1gwi_A CYP154C1, cytochrome P4 99.8 4.8E-20 1.6E-24 155.2 15.4 209 53-310 14-236 (411)
62 3b98_A Prostaglandin I2 syntha 99.8 2.7E-21 9.1E-26 166.2 5.2 157 34-201 15-174 (475)
63 3oft_A Cytochrome P450, CYP101 99.8 1E-19 3.5E-24 152.6 14.7 206 54-310 22-228 (396)
64 3mgx_A Putative P450 monooxyge 99.8 1E-19 3.5E-24 153.2 13.1 206 55-310 36-248 (415)
65 3buj_A CALO2; heme, iron, meta 99.8 1E-19 3.5E-24 152.6 12.7 207 56-310 13-227 (397)
66 3dan_A Cytochrome P450 74A2; A 99.8 8.8E-20 3E-24 156.7 11.0 164 33-204 5-187 (473)
67 1lfk_A OXYB, P450 monooxygenas 99.8 1.9E-19 6.5E-24 151.0 12.7 198 62-310 19-230 (398)
68 3rwl_A Cytochrome P450 alkane 99.8 2.5E-18 8.7E-23 145.2 17.5 212 55-310 37-259 (426)
69 1n40_A P450 MT2, cytochrome P4 99.8 8E-19 2.7E-23 147.0 13.0 205 54-310 14-227 (396)
70 2wiy_A XPLA-heme, cytochrome P 99.8 2.2E-18 7.5E-23 144.2 11.9 208 56-310 20-227 (394)
71 3p3o_A Cytochrome P450; monoox 99.7 8.8E-19 3E-23 147.7 6.0 210 55-310 32-247 (416)
72 3b4x_A 367AA long hypothetical 99.7 1.6E-17 5.4E-22 137.7 11.7 193 58-310 1-204 (367)
73 1io7_A Cytochrome P450 CYP119; 99.7 2.3E-17 7.9E-22 136.8 8.4 192 58-310 1-203 (368)
74 2rfb_A Cytochrome P450; heme, 99.7 5E-16 1.7E-20 127.5 11.0 180 67-310 2-182 (343)
75 4dxy_A Cytochrome P450, CYP101 99.6 7.9E-15 2.7E-19 123.2 17.7 212 55-310 36-249 (417)
76 4dnj_A Putative cytochrome P45 99.6 5E-15 1.7E-19 124.5 15.5 148 42-203 17-172 (412)
77 2yjn_B Erycii, DTDP-4-keto-6-d 98.2 2.1E-09 7.1E-14 88.7 -12.0 134 38-204 35-181 (381)
78 2diu_A KIAA0430 protein; struc 72.0 13 0.00045 23.4 5.6 60 46-106 12-75 (96)
79 3lqv_A PRE-mRNA branch site pr 71.7 17 0.00059 23.4 8.2 57 38-96 3-65 (115)
80 1s79_A Lupus LA protein; RRM, 67.1 21 0.00073 22.6 7.2 50 46-97 14-71 (103)
81 3d2w_A TAR DNA-binding protein 65.9 20 0.00067 21.9 5.7 53 40-94 8-64 (89)
82 1iqt_A AUF1, heterogeneous nuc 60.3 22 0.00076 20.5 6.0 50 48-99 4-62 (75)
83 2krb_A Eukaryotic translation 58.3 26 0.00089 20.7 7.9 51 47-97 5-66 (81)
84 2nlw_A Eukaryotic translation 51.9 42 0.0014 21.1 7.8 60 44-103 16-87 (105)
85 2mss_A Protein (musashi1); RNA 50.1 35 0.0012 19.6 6.1 50 48-99 4-62 (75)
86 3s6e_A RNA-binding protein 39; 49.7 38 0.0013 22.0 5.1 69 38-106 2-84 (114)
87 1sjq_A Polypyrimidine tract-bi 47.7 52 0.0018 21.0 7.1 53 42-96 15-70 (105)
88 1x4e_A RNA binding motif, sing 46.9 43 0.0015 19.8 5.0 51 44-96 6-65 (85)
89 2cqc_A Arginine/serine-rich sp 46.8 47 0.0016 20.2 6.7 55 41-97 13-76 (95)
90 2a3j_A U1 small nuclear ribonu 46.0 62 0.0021 21.4 6.1 61 45-105 31-100 (127)
91 3beg_B Splicing factor, argini 45.4 58 0.002 20.9 6.0 59 45-105 18-79 (115)
92 2ad9_A Polypyrimidine tract-bi 44.0 66 0.0022 21.1 6.6 51 44-96 32-85 (119)
93 2pe8_A Splicing factor 45; RRM 43.9 60 0.002 20.6 5.4 66 40-105 5-84 (105)
94 1x4c_A Splicing factor, argini 43.6 59 0.002 20.5 7.7 51 45-97 17-69 (108)
95 3zzy_A Polypyrimidine tract-bi 42.9 71 0.0024 21.4 5.7 49 46-96 31-84 (130)
96 1sjr_A Polypyrimidine tract-bi 42.6 86 0.0029 22.0 6.9 49 47-97 50-103 (164)
97 1nu4_A U1A RNA binding domain; 42.3 56 0.0019 19.9 5.0 53 45-97 10-70 (97)
98 2wbr_A GW182, gawky, LD47780P; 42.0 60 0.0021 20.1 6.3 51 44-96 8-61 (89)
99 3s8s_A Histone-lysine N-methyl 40.5 70 0.0024 20.4 6.0 51 45-97 8-67 (110)
100 3ue2_A Poly(U)-binding-splicin 40.2 75 0.0026 20.7 5.9 65 42-106 19-100 (118)
101 2jwn_A Embryonic polyadenylate 38.5 78 0.0027 20.4 5.5 54 47-102 40-102 (124)
102 3ns6_A Eukaryotic translation 38.2 71 0.0024 19.8 5.4 52 45-96 8-72 (100)
103 3s7r_A Heterogeneous nuclear r 36.9 66 0.0023 19.1 5.5 52 45-98 13-73 (87)
104 1whx_A Hypothetical protein ri 35.8 84 0.0029 19.9 6.3 59 46-106 13-75 (111)
105 2la6_A RNA-binding protein FUS 35.7 76 0.0026 19.4 7.4 53 42-96 12-81 (99)
106 4fxv_A ELAV-like protein 1; RN 35.0 81 0.0028 19.5 6.0 50 46-97 22-80 (99)
107 2dgx_A KIAA0430 protein; RRM d 35.0 78 0.0027 19.3 5.8 52 45-96 11-70 (96)
108 2e5h_A Zinc finger CCHC-type a 34.1 78 0.0027 19.1 6.7 51 44-96 17-76 (94)
109 2cq1_A PTB-like protein L; RRM 33.7 89 0.003 19.6 6.3 51 44-96 16-69 (101)
110 2jvr_A Nucleolar protein 3; RN 33.1 97 0.0033 19.9 6.5 51 45-97 30-86 (111)
111 2dhg_A TRNA selenocysteine ass 32.6 89 0.003 19.3 7.3 55 41-97 7-70 (104)
112 3ex7_B RNA-binding protein 8A; 32.5 1E+02 0.0035 19.9 6.8 59 45-105 24-92 (126)
113 2dnz_A Probable RNA-binding pr 32.3 85 0.0029 18.9 7.8 59 45-105 7-75 (95)
114 2do4_A Squamous cell carcinoma 32.2 89 0.003 19.1 7.2 52 44-97 18-77 (100)
115 4f25_A Polyadenylate-binding p 31.7 1E+02 0.0035 19.7 6.0 50 46-97 8-64 (115)
116 2cq4_A RNA binding motif prote 31.7 99 0.0034 19.5 5.1 51 47-99 29-88 (114)
117 1x4f_A Matrin 3; structural ge 31.5 97 0.0033 20.0 4.8 54 42-96 24-80 (112)
118 3bs9_A Nucleolysin TIA-1 isofo 31.2 83 0.0028 18.5 5.7 51 45-97 8-67 (87)
119 2cq3_A RNA-binding protein 9; 31.0 95 0.0033 19.1 7.3 52 44-97 16-74 (103)
120 2voo_A Lupus LA protein; RNA-b 30.4 1E+02 0.0036 22.1 5.3 50 47-98 113-170 (193)
121 1rk8_A CG8781-PA, CG8781-PA pr 30.1 1.4E+02 0.0046 20.6 6.4 50 46-97 75-133 (165)
122 1x4b_A Heterogeneous nuclear r 30.1 1.1E+02 0.0037 19.4 5.0 52 46-99 30-90 (116)
123 3v4m_A Splicing factor U2AF 65 30.1 1.1E+02 0.0036 19.4 5.6 47 60-106 30-88 (105)
124 3mdf_A Peptidyl-prolyl CIS-tra 29.9 87 0.003 18.3 7.1 52 43-96 7-67 (85)
125 2hvz_A Splicing factor, argini 29.7 99 0.0034 18.9 6.4 48 47-96 4-55 (101)
126 1whv_A Poly(A)-specific ribonu 29.7 1.1E+02 0.0037 19.4 5.2 38 59-96 29-67 (100)
127 2kxn_B Transformer-2 protein h 29.1 1.2E+02 0.0042 19.9 8.9 54 42-97 45-107 (129)
128 4f02_A Polyadenylate-binding p 28.8 1.4E+02 0.0049 21.5 6.0 55 41-97 13-76 (213)
129 2ywk_A Putative RNA-binding pr 28.8 99 0.0034 18.6 5.5 50 45-96 18-75 (95)
130 1x5p_A Negative elongation fac 27.7 1.1E+02 0.0037 18.7 7.3 50 44-97 16-68 (97)
131 2d9p_A Polyadenylate-binding p 27.7 1.1E+02 0.0038 18.8 7.2 62 41-104 13-82 (103)
132 1oo0_B CG8781-PA, drosophila Y 27.3 1.2E+02 0.004 19.0 6.6 49 46-96 29-86 (110)
133 1x4h_A RNA-binding protein 28; 27.3 1.2E+02 0.004 19.0 8.1 52 44-97 16-76 (111)
134 2dgv_A HnRNP M, heterogeneous 27.1 1E+02 0.0036 18.3 7.7 58 45-104 10-75 (92)
135 2fy1_A RNA-binding motif prote 26.7 1.3E+02 0.0044 19.2 5.9 59 45-105 9-76 (116)
136 1whw_A Hypothetical protein ri 26.3 1.1E+02 0.0039 18.5 6.5 51 45-97 10-69 (99)
137 3ulh_A THO complex subunit 4; 26.3 1.2E+02 0.0041 18.8 6.3 51 45-97 31-89 (107)
138 3r27_A HnRNP L, heterogeneous 26.2 1.3E+02 0.0043 19.0 7.1 53 42-96 20-75 (100)
139 1wi8_A EIF-4B, eukaryotic tran 26.0 1.2E+02 0.0041 18.7 5.8 59 41-102 13-81 (104)
140 3ucg_A Polyadenylate-binding p 25.7 1.1E+02 0.0037 18.1 5.5 54 47-102 10-72 (89)
141 1ghh_A DINI, DNA-damage-induci 25.6 1.2E+02 0.004 18.4 4.5 38 59-96 23-68 (81)
142 1uaw_A Mouse-musashi-1; RNP-ty 25.3 1E+02 0.0034 17.5 4.7 51 47-99 4-63 (77)
143 1l3k_A Heterogeneous nuclear r 25.3 1.8E+02 0.0061 20.4 6.0 53 45-99 15-76 (196)
144 1wg5_A Heterogeneous nuclear r 24.9 1.3E+02 0.0044 18.7 6.8 59 45-105 17-84 (104)
145 2cjk_A Nuclear polyadenylated 24.7 1.7E+02 0.0056 19.8 6.0 51 47-99 91-150 (167)
146 2x1f_A MRNA 3'-END-processing 24.7 1.2E+02 0.0042 18.3 6.6 49 46-96 5-62 (96)
147 3md1_A Nuclear and cytoplasmic 24.5 1.1E+02 0.0038 17.7 5.6 49 47-97 5-62 (83)
148 1x4d_A Matrin 3; structural ge 24.5 1.4E+02 0.0047 18.8 6.3 55 41-96 13-70 (102)
149 2bz2_A Negative elongation fac 24.4 1.5E+02 0.0051 19.2 6.4 54 45-102 41-98 (121)
150 1wf0_A TDP-43, TAR DNA-binding 24.3 93 0.0032 18.5 3.6 47 46-94 8-58 (88)
151 2dgs_A DAZ-associated protein 23.9 1.3E+02 0.0044 18.3 8.0 59 45-105 12-79 (99)
152 2kfd_A PRE-mRNA-processing pro 23.8 97 0.0033 17.8 3.1 40 32-71 25-68 (69)
153 3md3_A Nuclear and cytoplasmic 23.5 1.7E+02 0.0059 19.6 5.8 48 47-96 4-59 (166)
154 2jrs_A RNA-binding protein 39; 23.4 1.4E+02 0.0049 18.7 7.4 50 45-96 28-86 (108)
155 1wex_A Hypothetical protein (r 23.2 1.5E+02 0.005 18.7 7.3 51 44-96 16-69 (104)
156 3pgw_S U1-70K; protein-RNA com 23.2 2.1E+02 0.0073 23.8 6.6 51 45-97 104-163 (437)
157 2dnq_A RNA-binding protein 4B; 22.8 1.3E+02 0.0044 17.9 7.1 51 44-96 9-60 (90)
158 4gyx_A Type III collagen fragm 22.7 46 0.0016 14.9 1.3 9 38-46 4-12 (31)
159 2cqb_A Peptidyl-prolyl CIS-tra 22.6 1.4E+02 0.0048 18.2 6.1 54 42-97 11-73 (102)
160 1p1t_A Cleavage stimulation fa 21.5 1.5E+02 0.0051 18.1 6.3 50 46-97 11-69 (104)
161 1p27_B RNA-binding protein 8A; 21.3 1.5E+02 0.0052 18.2 7.2 50 46-97 26-84 (106)
162 2div_A TRNA selenocysteine ass 21.3 1.5E+02 0.005 18.0 6.4 54 42-97 8-71 (99)
163 2dnm_A SRP46 splicing factor; 20.9 1.5E+02 0.0053 18.1 7.0 58 45-104 15-82 (103)
164 1x5u_A Splicing factor 3B subu 20.8 1.6E+02 0.0054 18.1 8.4 58 45-104 17-84 (105)
165 2dnh_A Bruno-like 5, RNA bindi 20.6 1.6E+02 0.0054 18.1 6.7 50 45-96 17-74 (105)
166 1b35_D CRPV, protein (cricket 20.6 37 0.0013 18.0 0.9 11 44-54 30-40 (57)
167 2err_A Ataxin-2-binding protei 20.5 1.7E+02 0.0057 18.3 5.6 50 46-97 32-88 (109)
168 2cpf_A RNA binding motif prote 20.4 1.5E+02 0.0052 17.9 6.5 51 45-97 7-69 (98)
169 3n9u_C Cleavage and polyadenyl 20.4 2.1E+02 0.0073 19.5 6.2 49 47-97 59-118 (156)
170 3tyt_A Heterogeneous nuclear r 20.3 2.5E+02 0.0085 20.2 6.4 51 45-96 6-60 (205)
171 2cpj_A Non-POU domain-containi 20.3 1.6E+02 0.0054 17.9 5.8 58 45-104 17-78 (99)
172 2xs2_A Deleted in azoospermia- 20.3 95 0.0033 19.1 3.2 49 46-96 12-68 (102)
173 2ku7_A MLL1 PHD3-CYP33 RRM chi 20.2 1.9E+02 0.0065 18.9 7.7 49 47-97 67-124 (140)
No 1
>3swz_A Steroid 17-alpha-hydroxylase/17,20 lyase; cytochrome P450, CYP17A1, P450C17, P450 17A1, monooxyg 17A-hydroxylase, heme protein; HET: HEM TOK; 2.40A {Homo sapiens} PDB: 3ruk_A*
Probab=100.00 E-value=3.2e-34 Score=247.85 Aligned_cols=262 Identities=20% Similarity=0.334 Sum_probs=201.1
Q ss_pred CCCCCCCCCCCCCeeccccccC--CChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcc
Q 045977 34 KSYNFPPSPPALPIIGHSYLLS--SKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPS 111 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~--~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~ 111 (311)
++.+.||||+++|++||++.+. +.++..+.+|+++||+||++++|+.++|+|+||+++++++.++...|.+++.....
T Consensus 5 ~~~~~PPgP~~lPliGnl~~l~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~~k~il~~~~~~f~~rp~~~~~ 84 (494)
T 3swz_A 5 TGAKYPKSLLSLPLVGSLPFLPRHGHMHNNFFKLQKKYGPIYSVRMGTKTTVIVGHHQLAKEVLIKKGKDFSGRPQMATL 84 (494)
T ss_dssp -------CCBCCCEEEEESSCTTSSCHHHHHHHTHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTBBCCCCHHH
T ss_pred CCCCCCCCCCCCCeEcchHHhCCCCchhHHHHHHHHHcCCEEEEEeCCCCEEEECCHHHHHHHHHhCcHhhCCCCCcHHH
Confidence 5667899999999999999883 46789999999999999999999999999999999999999888889888876555
Q ss_pred cccccCCCceEeccCChhHHHHHHHHHHHHhcCh--hhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHH
Q 045977 112 KYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGP--QQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMT 189 (311)
Q Consensus 112 ~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~--~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~ 189 (311)
..+..++.|++++++|+.|+.+|+++. ++|+ . ..+..+.+.+.+++..+++.+... . +.++|+.+.+..++
T Consensus 85 ~~~~~~~~gl~~~~~g~~wr~~Rr~~~-~~f~-~~~~~~~~~~~~i~~~~~~l~~~l~~~----~-~~~vd~~~~~~~~t 157 (494)
T 3swz_A 85 DIASNNRKGIAFADSGAHWQLHRRLAM-ATFA-LFKDGDQKLEKIICQEISTLCDMLATH----N-GQSIDISFPVFVAV 157 (494)
T ss_dssp HHHTTTTCSSSSSCSSHHHHHHHHHHH-HHTT-TTSSSTTCHHHHHHHHHHHHHHHHHHT----T-TEEECCHHHHHHHH
T ss_pred HHhccCCCCeEeCCCCHHHHHHHHHHH-HHHH-HhcchHHHHHHHHHHHHHHHHHHHHHc----C-CCcccHHHHHHHHH
Confidence 444444568888777999999999999 9986 4 557789999999999999999874 2 66899999999999
Q ss_pred HHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 045977 190 NNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYE 269 (311)
Q Consensus 190 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 269 (311)
+|+|+.++||.+++. .+.....+....+.+........+..++||++++|. ...++.....+.+.+++.+++++++
T Consensus 158 ~dvi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~p~-~~~~~~~~~~~~~~~~~~~~i~~~~ 233 (494)
T 3swz_A 158 TNVISLICFNTSYKN---GDPELNVIQNYNEGIIDNLSKDSLVDLVPWLKIFPN-KTLEKLKSHVKIRNDLLNKILENYK 233 (494)
T ss_dssp HHHHHHHHHSCCCCT---TCTHHHHHHHHHHHHHHHHCSSSSCCSSCGGGTSCC-SHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHcCCcCCC---CCHHHHHHHHHHHHHHHhcccchHHHHHHHHHHcCc-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999875 233344444444444544444456777898887752 3346677777888889999998888
Q ss_pred hhcCCCCCCCCCCCHHHHHHHhccccC--------CccccCHhhhhhhc
Q 045977 270 DDNGIKDQENDDGDLMGILLETCRDEN--------SEVTLTRNQIKYFV 310 (311)
Q Consensus 270 ~~~~~~~~~~~~~dll~~ll~~~~~~~--------~~~~l~~~ei~~~i 310 (311)
+... .+...|+++.|+++..+.+ ++..+++++|..++
T Consensus 234 ~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~~~~~~~l~~~~i~~~~ 278 (494)
T 3swz_A 234 EKFR----SDSITNMLDTLMQAKMNSDNGNAGPDQDSELLSDNHILTTI 278 (494)
T ss_dssp TTCC----TTCCCSHHHHHHHHHHTSCCC----CCSSGGGCHHHHHHHH
T ss_pred Hhhc----ccchhHHHHHHHHHHHhhhcccccccccccccCHHHHHHHH
Confidence 7654 4556799999998643211 12358888887654
No 2
>3pm0_A Cypib1, cytochrome P450 1B1; CYP1B1, monooxygenase, alpha-naphthoflavone, 17BETA-estradiol, oxidoreductase; HET: HEM BHF; 2.70A {Homo sapiens}
Probab=100.00 E-value=6.6e-34 Score=246.72 Aligned_cols=265 Identities=15% Similarity=0.197 Sum_probs=188.4
Q ss_pred CCCCCCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccc
Q 045977 34 KSYNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKY 113 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 113 (311)
++.+.||||+++|++||++.+.++++..+.+|+++||+||++++|+.++|+|+||+++++|+.++...|.+++.......
T Consensus 6 ~~~~~pPgP~~~P~iG~~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~f~~r~~~~~~~~ 85 (507)
T 3pm0_A 6 SSKGKPPGPFAWPLIGNAAAVGQAAHLSFARLARRYGDVFQIRLGSCPIVVLNGERAIHQALVQQGSAFADRPSFASFRV 85 (507)
T ss_dssp ----------------------CCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTSCBCCCCHHHHH
T ss_pred CCCCCCcCCCCCCeeCchhhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCcchHHHh
Confidence 56678999999999999999988999999999999999999999999999999999999999888778888776554433
Q ss_pred cccCCCceEeccCChhHHHHHHHHHHHHhcChhhhH------HHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHH
Q 045977 114 NIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQID------RFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTN 187 (311)
Q Consensus 114 ~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~------~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~ 187 (311)
..+ +.+++++.+|+.|+++|++++ ++|+ ..... .+.+.+.++++.+++.+... ..+ +.++|+.+.+.+
T Consensus 86 ~~~-g~~l~~~~~g~~w~~~R~~~~-~~~~-~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~-~~~vd~~~~~~~ 159 (507)
T 3pm0_A 86 VSG-GRSMAFGHYSEHWKVQRRAAH-SMMR-NFFTRQPRSRQVLEGHVLSEARELVALLVRG--SAD-GAFLDPRPLTVV 159 (507)
T ss_dssp GGG-GTCSSSSCSSHHHHHHHHHHH-HHHH-HSTTSSTTHHHHHHHHHHHHHHHHHHHHHHT--TGG-GCCBCCHHHHHH
T ss_pred hcC-CCceEECCCChHHHHHHHHHH-HHHH-HhcCCccchHHHHHHHHHHHHHHHHHHHHhh--ccc-CCCcChHHHHHH
Confidence 333 357767666999999999999 8776 44433 38899999999999999875 444 678999999999
Q ss_pred HHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhccccccccc--chhhHHHHHHHHHHHHHHHHH
Q 045977 188 MTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLH--GIGKKLRDVFWRYDELLEKMM 265 (311)
Q Consensus 188 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~--~~~~~~~~~~~~~~~~~~~~i 265 (311)
+++|+++.++||.+++. ++.+...+.+.+..+........+..++|++.++|.. +..++..++.+.+.+++.+.+
T Consensus 160 ~~~dvi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~~~~~~~~~~~~~~~~~~~~~~~~i 236 (507)
T 3pm0_A 160 AVANVMSAVCFGCRYSH---DDPEFRELLSHNEEFGRTVGAGSLVDVMPWLQYFPNPVRTVFREFEQLNRNFSNFILDKF 236 (507)
T ss_dssp HHHHHHHHHHTSCCCCT---TCHHHHHHTSCHHHHHHHHSTTCCTTTCGGGGGSCSHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHccccCCC---CCHHHHHHHHHHHHHHHhcccchHHHHhHHHHHcCchhHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999986 3445555666666666655544566678888777421 135677778889999999999
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHhccccCC------ccccCHhhhhhhc
Q 045977 266 TDYEDDNGIKDQENDDGDLMGILLETCRDENS------EVTLTRNQIKYFV 310 (311)
Q Consensus 266 ~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~------~~~l~~~ei~~~i 310 (311)
+++++.... ++.+.|+++.|++......+ +..++++++.+++
T Consensus 237 ~~~~~~~~~---~~~~~d~l~~ll~~~~~~~~~~~~~~~~~l~~~~i~~~~ 284 (507)
T 3pm0_A 237 LRHCESLRP---GAAPRDMMDAFILSAEKKAAGDSHGGGARLDLENVPATI 284 (507)
T ss_dssp HHHHHHCCT---TCCCCSHHHHHHHHHHHHHSCC----CCCCCGGGHHHHH
T ss_pred HHHHhcccc---ccCCccHHHHHHHHhhhhccccccCCCCCCCHHHHHHHH
Confidence 999887541 25578999999965432211 1248999987764
No 3
>2hi4_A Cytochrome P450 1A2; CYP1A2, monooxygenase, drug metabolizing enzyme, alpha-naphthoflavone, benzo(H)flavone, 7,8- benzoflavone, oxidoreductase; HET: HEM BHF; 1.95A {Homo sapiens}
Probab=100.00 E-value=4.2e-33 Score=240.71 Aligned_cols=263 Identities=19% Similarity=0.258 Sum_probs=198.4
Q ss_pred CCCCCCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccc
Q 045977 34 KSYNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKY 113 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 113 (311)
++.+.+|||+++|++||++.+.++++..+.+++++|||||++++|+.++|+|+||+++++|+.+++..|.+++.......
T Consensus 13 ~~lp~~PgP~~~p~~G~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~i~~il~~~~~~f~~r~~~~~~~~ 92 (495)
T 2hi4_A 13 KGLKSPPEPWGWPLLGHVLTLGKNPHLALSRMSQRYGDVLQIRIGSTPVLVLSRLDTIRQALVRQGDDFKGRPDLYTSTL 92 (495)
T ss_dssp TTCBCCCCCCCBTTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTGGGSCBCCCCHHHHT
T ss_pred CCCCCCCCCCCCcceeeHHhcCccHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhcchhhCCCCCcHHHHH
Confidence 44445599999999999988877899999999999999999999999999999999999999877667877765433332
Q ss_pred cccCCCceEec-cCChhHHHHHHHHHHHHhcCh---hhh---H---HHHHHHHHHHHHHHHHHHHhccccCCCCCccchH
Q 045977 114 NIYDGSGFVTG-PYGAYWRFMKHLCVTKLFAGP---QQI---D---RFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGT 183 (311)
Q Consensus 114 ~~~~~~~l~~~-~~g~~w~~~R~~~~~~~f~~~---~~l---~---~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~ 183 (311)
+. ++.|++++ ++|+.|+++|++++ ++|+ . ..+ + .+.+.+.++++.+++.|... +.+ |+++|+.+
T Consensus 93 ~~-~~~~l~~~~~~g~~w~~~Rr~~~-~~f~-~~s~~~~~~~~~~~~~~~~i~~~~~~l~~~l~~~--~~~-~~~~d~~~ 166 (495)
T 2hi4_A 93 IT-DGQSLTFSTDSGPVWAARRRLAQ-NALN-TFSIASDPASSSSCYLEEHVSKEAKALISRLQEL--MAG-PGHFDPYN 166 (495)
T ss_dssp ST-TSCCTTTSSCCSHHHHHHHHHHH-HHHH-HTTTSBCSSCSSCBHHHHHHHHHHHHHHHHHHHH--HHT-TSCBCHHH
T ss_pred hc-CCCCEEEcCCCChHHHHHHHHHH-HHHH-HhccCcccccchhhhHHHHHHHHHHHHHHHHHHh--ccC-CCccchHH
Confidence 32 23577776 45999999999999 8864 3 222 2 78999999999999999874 334 66899999
Q ss_pred HHHHHHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHH
Q 045977 184 EVTNMTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEK 263 (311)
Q Consensus 184 ~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~ 263 (311)
.+..+++|+++.++||.+++. ++.+...+.+....+........+..++|+++++|. +..++..++.+.+.+++.+
T Consensus 167 ~~~~~~~dvi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~ 242 (495)
T 2hi4_A 167 QVVVSVANVIGAMCFGQHFPE---SSDEMLSLVKNTHEFVETASSGNPLDFFPILRYLPN-PALQRFKAFNQRFLWFLQK 242 (495)
T ss_dssp HHHHHHHHHHHHHHHGGGSCT---TCHHHHHHHTTTHHHHTTSSTTCGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCCCC---CCHHHHHHHHHHHHHHHhcccchHHHHhHHHHhcCc-hHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999875 333444555555555543333234566788776642 3456677788899999999
Q ss_pred HHHHHHhhcCCCCCCCCCCCHHHHHHHhcccc--CCccccCHhhhhhhc
Q 045977 264 MMTDYEDDNGIKDQENDDGDLMGILLETCRDE--NSEVTLTRNQIKYFV 310 (311)
Q Consensus 264 ~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~--~~~~~l~~~ei~~~i 310 (311)
+|+++++..+ .+...|+++.|++...+. +++..++++|+.+++
T Consensus 243 ~i~~r~~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 287 (495)
T 2hi4_A 243 TVQEHYQDFD----KNSVRDITGALFKHSKKGPRASGNLIPQEKIVNLV 287 (495)
T ss_dssp HHHHHHHTCC----TTCCCSHHHHHHHHHHHCCEETTEECCTHHHHTHH
T ss_pred HHHHHHHhhc----ccccccHHHHHHHHhhhccCccccCCCHHHHHHHH
Confidence 9999987644 344579999999653221 112358999988764
No 4
>3e6i_A CYPIIE1, P450-J, cytochrome P450 2E1; CYP2E1, monooxygenase, acetaminophen, oxidoreductase, heme, endoplasmic reticulum, iron, membrane; HET: HEM; 2.20A {Homo sapiens} PDB: 3e4e_A* 3gph_A* 3koh_A* 3lc4_A* 3t3z_A*
Probab=100.00 E-value=3.7e-32 Score=233.95 Aligned_cols=259 Identities=20% Similarity=0.288 Sum_probs=198.7
Q ss_pred CCCCCCCCCCCCCCeecccccc-CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcc
Q 045977 33 TKSYNFPPSPPALPIIGHSYLL-SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPS 111 (311)
Q Consensus 33 ~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~ 111 (311)
+++.+.||||+++|++||++++ ..+++..+.+|+++||+||++++|+.++|+|+||+++++|+.++...|.+++.....
T Consensus 6 ~~~~~lpPgP~~~PliG~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~~~~v~~il~~~~~~f~~r~~~~~~ 85 (476)
T 3e6i_A 6 SSKGKLPPGPFPLPIIGNLFQLELKNIPKSFTRLAQRFGPVFTLYVGSQRMVVMHGYKAVKEALLDYKDEFSGRGDLPAF 85 (476)
T ss_dssp ----CCCCCCCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTSTTTTCEECCCGGG
T ss_pred cCCCCCCcCCCCcccccChhhhccccHhHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcchHhhCCCCCCchh
Confidence 3566789999999999999998 678999999999999999999999999999999999999999887778877665544
Q ss_pred cccccCCCceEeccCChhHHHHHHHHHHHHhcChhhh--HHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHH
Q 045977 112 KYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQI--DRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMT 189 (311)
Q Consensus 112 ~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~ 189 (311)
..+.+ + |+++.+ |+.|+++|+++. +.|+ ...+ ..+.+.+.++++.+++.+... . +.++|+.+.+..++
T Consensus 86 ~~~~~-~-~l~~~~-g~~w~~~Rr~~~-~~l~-~~~~~~~~~~~~i~~~~~~l~~~l~~~----~-~~~~d~~~~~~~~~ 155 (476)
T 3e6i_A 86 HAHRD-R-GIIFNN-GPTWKDIRRFSL-TTLR-NYGMGKQGNESRIQREAHFLLEALRKT----Q-GQPFDPTFLIGCAP 155 (476)
T ss_dssp GGGTT-S-SSTTCC-STTHHHHHHHHH-HHHH-HTC-CCSHHHHHHHHHHHHHHHHHHTT----T-TSCBCTHHHHTHHH
T ss_pred heecC-C-CEEecC-CcHHHHHHHHHH-HHHH-hcCCCchHHHHHHHHHHHHHHHHHHHh----C-CCCcChHHHHHHHH
Confidence 44433 2 777776 999999999988 8887 5544 457799999999999999764 3 66899999999999
Q ss_pred HHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhccc--Ccchhhc-ccccccccchhhHHHHHHHHHHHHHHHHHH
Q 045977 190 NNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKL--GVSKVFS-FRTKMDLHGIGKKLRDVFWRYDELLEKMMT 266 (311)
Q Consensus 190 ~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P-~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 266 (311)
+|+++.++||.+++. .+.+...+...+...+...... .+...+| ++.+++ +..++..++.+.+.+++.+.|+
T Consensus 156 ~dvi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~ 230 (476)
T 3e6i_A 156 CNVIADILFRKHFDY---NDEKFLRLMYLFNENFHLLSTPWLQLYNNFPSFLHYLP--GSHRKVIKNVAEVKEYVSERVK 230 (476)
T ss_dssp HHHHHHHHHSCCCCT---TCHHHHHHHHHHHHHHHHTTSHHHHHHHHSHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCC---CCHHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHHcC--cHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999986 3334455555555555443221 1233456 555553 4456777888899999999999
Q ss_pred HHHhhcCCCCCCCCCCCHHHHHHHhccccC--CccccCHhhhhhhc
Q 045977 267 DYEDDNGIKDQENDDGDLMGILLETCRDEN--SEVTLTRNQIKYFV 310 (311)
Q Consensus 267 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~--~~~~l~~~ei~~~i 310 (311)
++++..+ .+.+.|+++.|+....+++ .+..++++++.+++
T Consensus 231 ~~~~~~~----~~~~~d~~~~ll~~~~~~~~~~~~~l~~~~i~~~~ 272 (476)
T 3e6i_A 231 EHHQSLD----PNCPRDLTDCLLVEMEKEKHSAERLYTMDGITVTV 272 (476)
T ss_dssp HHHHTCC----TTSCCSHHHHHHHHHHSSSSCSSCSCCHHHHHHHH
T ss_pred HHhhcCC----CCCCccHHHHHHHHHHhcccCCCCCcCHHHHHHHH
Confidence 9988755 4446799999997644322 22458999988764
No 5
>3qz1_A Steroid 21-hydroxylase; P450 monooxygenase, oxidoreductase; HET: HEM 3QZ; 3.00A {Bos taurus}
Probab=100.00 E-value=2e-33 Score=243.06 Aligned_cols=254 Identities=17% Similarity=0.249 Sum_probs=194.0
Q ss_pred CCCCCCCCCCCCCCeecccccc-CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcc
Q 045977 33 TKSYNFPPSPPALPIIGHSYLL-SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPS 111 (311)
Q Consensus 33 ~~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~ 111 (311)
+++.+.||||++ ++.+ .++++..+.+|+++|||||++++|+.++|+|+||+++++|+.++...|.+++.....
T Consensus 25 ~~~~~lPPGP~~------l~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~~f~~r~~~~~~ 98 (496)
T 3qz1_A 25 LRNLHLPPLVPG------FLHLLQPNLPIHLLSLTQKLGPVYRLRLGLQEVVVLNSKRTIEEAMIRKWVDFAGRPQIPSY 98 (496)
T ss_dssp ----CCCCBCSC------SCTTSSSCHHHHHHHGGGTSCSEEEECSSSSCEEEECSTTHHHHTTTTSCSTTCBCCCCTTT
T ss_pred ccCCCCCcCCcc------ccccCCCcchHHHHHHHHHhCCEEEEEeCCcCEEEECCHHHHHHHHHhCcHhhCCCCCcchH
Confidence 456789999987 4444 678999999999999999999999999999999999999999887778888765544
Q ss_pred cccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHH
Q 045977 112 KYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNN 191 (311)
Q Consensus 112 ~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~ 191 (311)
.....+..|++++++|+.|+++||+++ ++|+ ...++.+.+.+.++++.+++.+... . |+++|+.+.+..+++|
T Consensus 99 ~~~~~~~~~l~~~~~g~~w~~~Rr~~~-~~f~-~~~~~~~~~~i~~~~~~l~~~l~~~----~-~~~vd~~~~~~~~~~d 171 (496)
T 3qz1_A 99 KLVSQRCQDISLGDYSLLWKAHKKLTR-SALL-LGTRSSMEPWVDQLTQEFCERMRVQ----A-GAPVTIQKEFSLLTCS 171 (496)
T ss_dssp TTSCTTCCCSSSSCCSHHHHHHHHHHH-HHHH-C--CCCHHHHHHHHHHHHHHHHHTT----C-SCCCHHHHHHTHHHHH
T ss_pred HHhcCCCCceEECCCCHHHHHHHHHHH-HHHh-hccHhhHHHHHHHHHHHHHHHHHhc----C-CCccCHHHHHHHHHHH
Confidence 444333348888766999999999999 9999 8888889999999999999999874 2 6689999999999999
Q ss_pred HHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcc--cCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHH
Q 045977 192 LIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAK--LGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYE 269 (311)
Q Consensus 192 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 269 (311)
+++.++||. . ++.....+.+.+......... ..+...+|+++++|. +..++..++.+.+.+++.+.|++++
T Consensus 172 vi~~~~fG~--~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~~~ 244 (496)
T 3qz1_A 172 IICYLTFGN--K----EDTLVHAFHDCVQDLMKTWDHWSIQILDMVPFLRFFPN-PGLWRLKQAIENRDHMVEKQLRRHK 244 (496)
T ss_dssp HTTTTSTTC--C----CHHHHHHHHHHHHTTTTTTSSHHHHHHHHCGGGCCCCC-HHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHhcCC--C----CChHHHHHHHHHHHHHHHhccchhHHHHhHHHHHhCCh-HHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999 2 233445555555544433222 224556788877752 4456778888999999999999998
Q ss_pred hhcCCCCCCCCCCCHHHHHHHhccccC--Cc-cccCHhhhhhhc
Q 045977 270 DDNGIKDQENDDGDLMGILLETCRDEN--SE-VTLTRNQIKYFV 310 (311)
Q Consensus 270 ~~~~~~~~~~~~~dll~~ll~~~~~~~--~~-~~l~~~ei~~~i 310 (311)
+..+ .+..+|+++.|++...+.. ++ ..++++++.+++
T Consensus 245 ~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~~l~~~~i~~~~ 284 (496)
T 3qz1_A 245 ESMV----AGQWRDMTDYMLQGVGRQRVEEGPGQLLEGHVHMSV 284 (496)
T ss_dssp HSCC----SSCCSSSHHHHTTSSTTCCC-----CCCTHHHHHHH
T ss_pred hhcc----CCCccchHHHHHHHHHhccccCCcccccHHHHHHHH
Confidence 8765 4456799999998754321 11 258999987764
No 6
>2fdv_A Cytochrome P450 2A6; CYP2A6, monooxygenase, drug metabolizing enzyme, coumarin 7-hydroxylase, nicotine oxidase, oxidoreductase; HET: HEM D2G; 1.65A {Homo sapiens} PDB: 1z11_A* 1z10_A* 2fdu_A* 2fdw_A* 2fdy_A* 3t3r_A* 2pg5_A* 2pg7_A* 2pg6_A* 3t3q_A* 3ebs_A* 2p85_A* 3t3s_A*
Probab=100.00 E-value=5.4e-32 Score=232.74 Aligned_cols=259 Identities=17% Similarity=0.309 Sum_probs=197.9
Q ss_pred CCCCCCCCCCCCCeecccccc-CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCccc
Q 045977 34 KSYNFPPSPPALPIIGHSYLL-SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSK 112 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~ 112 (311)
++.+.||||+++|++||++.+ ..+++..+.+++++|||||++++++.++|+|+||+++++|+.++...|.+++......
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 2fdv_A 7 SKGKLPPGPTPLPFIGNYLQLNTEQMYNSLMKISERYGPVFTIHLGPRRVVVLCGHDAVREALVDQAEEFSGRGEQATFD 86 (476)
T ss_dssp -CCBCCCCCCCBTTTBTGGGCCTTBHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCCHHHH
T ss_pred ccCCCCCCCCCCcccccHhhcCCcchHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhcChHhhCCCCCcHHHh
Confidence 444689999999999999998 6789999999999999999999999999999999999999976666677665432222
Q ss_pred ccccCCCceEeccCChhHHHHHHHHHHHHhcChhhh--HHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHH
Q 045977 113 YNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQI--DRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTN 190 (311)
Q Consensus 113 ~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~ 190 (311)
.... +.|+++++ |+.|+++|+++. ++|+ ...+ +.+.+.+.++++.+++.|... . ++++|+.+.+..+++
T Consensus 87 ~~~~-~~~l~~~~-g~~~~~~Rr~~~-~~f~-~~~~~~~~~~~~i~~~~~~l~~~l~~~----~-~~~vd~~~~~~~~~~ 157 (476)
T 2fdv_A 87 WVFK-GYGVVFSN-GERAKQLRRFSI-ATLR-DFGVGKRGIEERIQEEAGFLIDALRGT----G-GANIDPTFFLSRTVS 157 (476)
T ss_dssp HHHT-TCSSSSCC-HHHHHHHHHHHH-HHHH-HTTTTSHHHHHHHHHHHHHHHHHHHHT----T-TCCBCCHHHHHHHHH
T ss_pred hhcC-CCCeEecC-chHHHHHHHHHH-HHHH-HhCCChhhHHHHHHHHHHHHHHHHHhc----C-CCccChHHHHHHHHH
Confidence 2222 35777775 999999999999 9998 8776 789999999999999999864 2 568999999999999
Q ss_pred HHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhccc--Ccchhhcc-cccccccchhhHHHHHHHHHHHHHHHHHHH
Q 045977 191 NLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKL--GVSKVFSF-RTKMDLHGIGKKLRDVFWRYDELLEKMMTD 267 (311)
Q Consensus 191 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (311)
|+++.++||.+++. ++.+...+.+.+.......... .+...+|+ +++++ +..++..++.+.+.+++.+.|++
T Consensus 158 ~vi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~l~--~~~~~~~~~~~~~~~~~~~~i~~ 232 (476)
T 2fdv_A 158 NVISSIVFGDRFDY---KDKEFLSLLRMMLGIFQFTSTSTGQLYEMFSSVMKHLP--GPQQQAFQLLQGLEDFIAKKVEH 232 (476)
T ss_dssp HHHHHHHHSSCCCT---TCHHHHHHHHHHHHHHHHHTSHHHHHHHHHHHHHTTSC--SHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCcCCC---CCHHHHHHHHHHHHHHHhhcccccchhhhhhhHHHhcC--cHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999875 3334455555555555432211 12345675 55553 33466777888999999999999
Q ss_pred HHhhcCCCCCCCCCCCHHHHHHHhcccc--CCccccCHhhhhhhc
Q 045977 268 YEDDNGIKDQENDDGDLMGILLETCRDE--NSEVTLTRNQIKYFV 310 (311)
Q Consensus 268 ~~~~~~~~~~~~~~~dll~~ll~~~~~~--~~~~~l~~~ei~~~i 310 (311)
+++..+ .+.+.|+++.|++...+. .++..++++|+.+++
T Consensus 233 r~~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 273 (476)
T 2fdv_A 233 NQRTLD----PNSPRDFIDSFLIRMQEEEKNPNTEFYLKNLVMTT 273 (476)
T ss_dssp HHTTCC----TTSCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHH
T ss_pred HHHhcC----CCCCccHHHHHHHHHHhcccCccccccHHHHHHHH
Confidence 887643 344579999999864321 122459999998765
No 7
>3czh_A Cytochrome P450 2R1; vitamin D, vitamin S 25-hydroxylase, drug metabolism, structural genomics, structural genomics consortium, SGC; HET: BCD HEM D2V; 2.30A {Homo sapiens} SCOP: a.104.1.1 PDB: 2ojd_A* 3c6g_A* 3dl9_A*
Probab=100.00 E-value=3.1e-32 Score=234.42 Aligned_cols=261 Identities=20% Similarity=0.290 Sum_probs=197.3
Q ss_pred CCCCCCCCCCCCCeeccccccC-CC--hhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCc
Q 045977 34 KSYNFPPSPPALPIIGHSYLLS-SK--LPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCP 110 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~-~~--~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~ 110 (311)
++.+.||||+++|++||++.+. .. ++..+.+++++|||||++++++.++|+|+||+++++|+.+++..|++++....
T Consensus 9 ~~~~lpPgP~~~p~~G~~~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~vl~~~~~~f~~~~~~~~ 88 (481)
T 3czh_A 9 RPMGFPPGPPGLPFIGNIYSLAASSELPHVYMRKQSQVYGEIFSLDLGGISTVVLNGYDVVKECLVHQSEIFADRPCLPL 88 (481)
T ss_dssp ---CCCCCCCCBTTTBHHHHHHHCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEEESHHHHHHHHTTTTTTTCBCCCCHH
T ss_pred CCCCCCCCCCCCcccccHhhcCcccCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHhhchHhhCCCCCcHH
Confidence 4557899999999999998873 33 89999999999999999999999999999999999999877667877764433
Q ss_pred ccccccCCCceEeccCChhHHHHHHHHHHHHhcChhhh--HHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHH
Q 045977 111 SKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQI--DRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNM 188 (311)
Q Consensus 111 ~~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~ 188 (311)
...+.++ .|+++..+|+.|+++|++++ ++|+ ...+ ..+.+.+.++++.+++.+... . |+++|+.+.+.++
T Consensus 89 ~~~~~~~-~~~~~~~~g~~w~~~R~~~~-~~f~-~~~~~~~~~~~~i~~~~~~l~~~l~~~----~-~~~~d~~~~~~~~ 160 (481)
T 3czh_A 89 FMKMTKM-GGLLNSRYGRGWVDHRRLAV-NSFR-YFGYGQKSFESKILEETKFFNDAIETY----K-GRPFDFKQLITNA 160 (481)
T ss_dssp HHHHHTT-CSSTTCCSSHHHHHHHHHHH-HHHH-HTTTTSTTHHHHHHHHHHHHHHHHHTT----T-TCCBCCHHHHHHH
T ss_pred HHhhcCC-CCeEeCCCChHHHHHHHHHH-HHHH-HhcCChHHHHHHHHHHHHHHHHHHHHc----C-CCCcCHHHHHHHH
Confidence 3323222 36555556999999999999 9998 7654 678999999999999999864 2 5579999999999
Q ss_pred HHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccC--cchhhcccccccccchhhHHHHHHHHHHHHHHHHHH
Q 045977 189 TNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLG--VSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMT 266 (311)
Q Consensus 189 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 266 (311)
++|+++.++||.+++. ++.+...+.+.+........... +...+|+++++|. +..++..++.+.+.+++.++|+
T Consensus 161 ~~~vi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~ 236 (481)
T 3czh_A 161 VSNITNLIIFGERFTY---EDTDFQHMIELFSENVELAASASVFLYNAFPWIGILPF-GKHQQLFRNAAVVYDFLSRLIE 236 (481)
T ss_dssp HHHHHHHHHHSSCCCT---TCHHHHHHHHHHHHHHHHTTSHHHHHHHHCGGGGGCSS-SHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCCC---CCHHHHHHHHHHHHHHhhhccchhHHhhhhHHHHhCCc-hHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999875 33445556666666555433211 3456787766542 3456677788889999999999
Q ss_pred HHHhhcCCCCCCCCCCCHHHHHHHhcccc--CCccccCHhhhhhhc
Q 045977 267 DYEDDNGIKDQENDDGDLMGILLETCRDE--NSEVTLTRNQIKYFV 310 (311)
Q Consensus 267 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~--~~~~~l~~~ei~~~i 310 (311)
++++..+ ...++|+++.|+++..+. +.+..++++|+.+++
T Consensus 237 ~r~~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~ 278 (481)
T 3czh_A 237 KASVNRK----PQLPQHFVDAYLDEMDQGKNDPSSTFSKENLIFSV 278 (481)
T ss_dssp HHHTTCC----TTCCSSHHHHHHHHHHHTTTCTTCCCCHHHHHHHH
T ss_pred HHHHhcC----CCchHHHHHHHHHHHHhcccCccccccHHHHHHHH
Confidence 9987643 344579999999774331 112459999998765
No 8
>3s79_A Cytochrome P450 19A1; oxidoreductase; HET: HEM ASD; 2.75A {Homo sapiens} PDB: 3eqm_A* 3s7s_A* 4gl5_A* 4gl7_A*
Probab=100.00 E-value=3e-32 Score=236.09 Aligned_cols=254 Identities=13% Similarity=0.147 Sum_probs=184.4
Q ss_pred CCCCCCCCCCCCCeeccccccC----CChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCC
Q 045977 34 KSYNFPPSPPALPIIGHSYLLS----SKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPC 109 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~----~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~ 109 (311)
++.+.||||+++|++||++.+. ...+..+.+|+++|||||++++|+.++|+|+||+++++++.++ .|.+++...
T Consensus 42 ~~~~~pPGP~~~P~iGnl~~~~~~~~~~~~~~~~~~~~~yG~v~~~~~g~~~~vvv~~p~~~~~il~~~--~~~~r~~~~ 119 (503)
T 3s79_A 42 EGTSSIPGPGYCMGIGPLISHGRFLWMGIGSACNYYNRVYGEFMRVWISGEETLIISKSSSMFHIMKHN--HYSSRFGSK 119 (503)
T ss_dssp ---CCCCSCCCCSSSHHHHHHHHHHHHCHHHHHHHHHHHSCSEEEEESSSSEEEEECCHHHHHHHHHSG--GGCCCCCCH
T ss_pred hccCCCCCCCCCceeeehhccccccccchhHHHHHHHHHhCCeEEEEeCCccEEEECCHHHHHHHHhcC--CCCCcchhh
Confidence 4567899999999999998873 2455688899999999999999999999999999999999643 466665432
Q ss_pred cc-cccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHH
Q 045977 110 PS-KYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNM 188 (311)
Q Consensus 110 ~~-~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~ 188 (311)
.. ......+.|+++..+|+.|+++|++++ ++|+ ...++.+.+.+.+++.++++.+... .+. ++.+|+.+.+..+
T Consensus 120 ~~~~~~~~~~~~~~~~~~g~~w~~~Rr~~~-~~f~-~~~l~~~~~~~~~~~~~~l~~l~~~--~~~-~~~vdl~~~~~~~ 194 (503)
T 3s79_A 120 LGLQCIGMHEKGIIFNNNPELWKTTRPFFM-KALS-GPGLVRMVTVCAESLKTHLDRLEEV--TNE-SGYVDVLTLLRRV 194 (503)
T ss_dssp HHHHHHTCTTSSSTTCCCHHHHHHHHHHHH-HHTS-THHHHHHHHHHHHHHHHHHTTGGGT--BCT-TSCBCHHHHHHHH
T ss_pred hhhhhhccCCCceeeCCCccHHHHHHHhhh-HhhC-hHHHHHHHHHHHHHHHHHHHHHHHH--hcC-CCeEcHHHHHHHH
Confidence 21 222223457776667999999999999 9999 9999999999999999999988765 444 6689999999999
Q ss_pred HHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 045977 189 TNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDY 268 (311)
Q Consensus 189 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 268 (311)
++++++.++||.+++. .+....+.+.+..+...... ...++.+.+ ..++..++.+.+.+++.++|+++
T Consensus 195 ~~~vi~~~~fG~~~~~----~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~i~~~ 262 (503)
T 3s79_A 195 MLDTSNTLFLRIPLDE----SAIVVKIQGYFDAWQALLIK---PDIFFKISW-----LYKKYEKSVKDLKDAIEVLIAEK 262 (503)
T ss_dssp HHHHHHHHHTCCCCCH----HHHHHHHHHHHHHHHHHTTC---CHHHHHSGG-----GTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHcCcccCc----hhHHHHHHHHHHHHHHHhcC---cHHHhhcch-----hHHHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999863 22233333333333222211 111111111 23566778889999999999998
Q ss_pred HhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 269 EDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 269 ~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
++..+.++..+...|+++.|++...++ .++++++.+.+
T Consensus 263 ~~~~~~~~~~~~~~d~l~~ll~~~~~~----~l~~~~i~~~~ 300 (503)
T 3s79_A 263 RRRISTEEKLEECMDFATELILAEKRG----DLTRENVNQCI 300 (503)
T ss_dssp HHHHHTCTTTTTTCCHHHHHHHHHHTT----SSCHHHHHHHH
T ss_pred HHHhhcccccchHHHHHHHHHHhcccC----CCCHHHHHHHH
Confidence 876542110223459999999875433 38999987764
No 9
>1r9o_A Cytochrome P450 2C9; monooxygenase, drug metabolizing enzyme, oxidoreductas; HET: HEM FLP; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1og5_A* 1og2_A* 2nnj_A* 1pq2_A* 2nni_A* 2nnh_A* 2vn0_A* 1nr6_A* 1dt6_A* 1n6b_A*
Probab=100.00 E-value=1.2e-31 Score=230.70 Aligned_cols=259 Identities=18% Similarity=0.260 Sum_probs=186.3
Q ss_pred CCCCCCCCCCCCCeecccccc-CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCccc
Q 045977 34 KSYNFPPSPPALPIIGHSYLL-SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSK 112 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~ 112 (311)
++.+.||||+++|++||++.+ ..+++..+.+++++|||||++++++.++|+|+||+++++|+.++...|.+++......
T Consensus 8 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~~~~il~~~~~~f~~~~~~~~~~ 87 (477)
T 1r9o_A 8 GRGKLPPGPTPLPVIGNILQIGIKDISKSLTNLSKVYGPVFTLYFGLKPIVVLHGYEAVKEALIDLGEEFSGRGIFPLAE 87 (477)
T ss_dssp -CCBCCCCSSSCC-----CCBCHHHHHHHHHHHHHHHCSEEEEESSSCEEEEECSHHHHHHHHTTTTTTTCEECCCSCCC
T ss_pred CCCCCCCCCCCCceeccHhhcCCCChHHHHHHHHHHhCCEEEEEECCCcEEEECCHHHHHHHHhcccHhhCCCCcchhhh
Confidence 445689999999999999988 5678899999999999999999998899999999999999976666677665433232
Q ss_pred ccccCCCceEeccCChhHHHHHHHHHHHHhcChh--hhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHH
Q 045977 113 YNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQ--QIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTN 190 (311)
Q Consensus 113 ~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~ 190 (311)
.... +.|+++++ |+.|+++||++. ++|+ +. .++.+.+.+.++++.+++.+... . ++++|+.+.+..+++
T Consensus 88 ~~~~-~~~l~~~~-g~~w~~~Rr~~~-~~~~-~~~~~~~~~~~~i~~~~~~l~~~l~~~----~-~~~vd~~~~~~~~~~ 158 (477)
T 1r9o_A 88 RANR-GFGIVFSN-GKKWKEIRRFSL-MTLR-NFGMGKRSIEDRVQEEARCLVEELRKT----K-ASPCDPTFILGCAPC 158 (477)
T ss_dssp TTTC-TTSSTTCC-HHHHHHHHHHHH-HHHT-TSSSCSSCHHHHHHHHHHHHHHHHHTT----T-TSCBCTHHHHHHHHH
T ss_pred hccC-CCceEecC-ChHHHHHHHHHH-HHHH-HhCCChHHHHHHHHHHHHHHHHHHHhc----C-CCccChHHHHHHHHH
Confidence 2222 35777775 999999999999 9998 76 45678999999999999999864 2 558999999999999
Q ss_pred HHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhccc--Ccchhhcc-cccccccchhhHHHHHHHHHHHHHHHHHHH
Q 045977 191 NLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKL--GVSKVFSF-RTKMDLHGIGKKLRDVFWRYDELLEKMMTD 267 (311)
Q Consensus 191 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (311)
|+++.++||.+++. ++.+...+.+.+.......... .+...+|+ +++++ ...++..++.+.+.+++.++|++
T Consensus 159 ~vi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~lp--~~~~~~~~~~~~~~~~~~~~i~~ 233 (477)
T 1r9o_A 159 NVICSIIFHKRFDY---KDQQFLNLMEKLNENIKILSSPWIQICNNFSPIIDYFP--GTHNKLLKNVAFMKSYILEKVKE 233 (477)
T ss_dssp HHHHHHHHSCCCCT---TCHHHHHHHHHHHHHHHHHTCCBC-------CCCSCCT--TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHccCcCCC---CCHHHHHHHHHHHHHHHhhccchhHHHhhccHHHHhcc--hHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999875 3334455555555554332211 22345675 34443 22356677888899999999999
Q ss_pred HHhhcCCCCCCCCCCCHHHHHHHhcccc--CCccccCHhhhhhhc
Q 045977 268 YEDDNGIKDQENDDGDLMGILLETCRDE--NSEVTLTRNQIKYFV 310 (311)
Q Consensus 268 ~~~~~~~~~~~~~~~dll~~ll~~~~~~--~~~~~l~~~ei~~~i 310 (311)
+++..+ ...+.|+++.|++...+. +.+..+|++|+.+++
T Consensus 234 r~~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 274 (477)
T 1r9o_A 234 HQESMD----MNNPQDFIDCFLMKMEKEKHNQPSEFTIESLENTA 274 (477)
T ss_dssp HHHTCC----TTCCCSHHHHHHHHHHHHTTSCSCSCCHHHHHHHH
T ss_pred HHhccC----CCCchHHHHHHHHHHHhhhccCCCCCCHHHHHHHH
Confidence 987643 344579999999653321 122459999998765
No 10
>1po5_A Cytochrome P450 2B4; oxidoreductase, membrane protein, CYP 2B4, CYP LM2, cytochro monooxygenase; HET: HEM; 1.60A {Oryctolagus cuniculus} SCOP: a.104.1.1 PDB: 3mvr_A* 2bdm_A* 3g5n_A* 3g93_A* 3kw4_A* 3me6_A* 1suo_A* 3r1a_A* 3r1b_A* 2q6n_A* 3tk3_A* 3ibd_A* 3qoa_A* 3qu8_A*
Probab=100.00 E-value=9.8e-32 Score=231.14 Aligned_cols=259 Identities=15% Similarity=0.270 Sum_probs=192.2
Q ss_pred CCCCCCCCCCCCCeecccccc-CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCccc
Q 045977 34 KSYNFPPSPPALPIIGHSYLL-SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSK 112 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~ 112 (311)
++.+.||||+++|++||++.+ ..+++..+.+++++|||||++++|+.++|+|+||+++++|+.++...|.+++......
T Consensus 7 ~~~~~pPgP~~~p~iG~~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~v~v~~~~~i~~il~~~~~~f~~~~~~~~~~ 86 (476)
T 1po5_A 7 SKGKLPPGPSPLPVLGNLLQMDRKGLLRSFLRLREKYGDVFTVYLGSRPVVVLCGTDAIREALVDQAEAFSGRGKIAVVD 86 (476)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHTTTTTTTCEECCGGGGC
T ss_pred CCCCCCcCCCCCCccccHHhccCCcHHHHHHHHHHHhCCEEEEEECCccEEEECCHHHHHHHHHhCcHhhCCCCCcHHHH
Confidence 445789999999999999988 6889999999999999999999999999999999999999977666677665433232
Q ss_pred ccccCCCceEeccCChhHHHHHHHHHHHHhcChh--hhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHH
Q 045977 113 YNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQ--QIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTN 190 (311)
Q Consensus 113 ~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~--~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~ 190 (311)
.... +.|+++++ |+.|+++|+++. ++|+ .. .++.+.+.+.++++.+++.|... . |+++|+.+.+..+++
T Consensus 87 ~~~~-~~~l~~~~-g~~w~~~Rr~~~-~~f~-~~~~~~~~~~~~i~~~~~~l~~~l~~~----~-~~~~d~~~~~~~~~~ 157 (476)
T 1po5_A 87 PIFQ-GYGVIFAN-GERWRALRRFSL-ATMR-DFGMGKRSVEERIQEEARCLVEELRKS----K-GALLDNTLLFHSITS 157 (476)
T ss_dssp SCCS-SCCCCCSS-HHHHHHHHHHHH-HHHH-HSCCCHHHHHHHHHHHHHHHHHHHHHT----T-TCCBCCHHHHHHHHH
T ss_pred hhcC-CCceEecC-CcHHHHHHHHHH-HHHH-HhCCChhHHHHHHHHHHHHHHHHHHhc----C-CCccCHHHHHHHHHH
Confidence 2222 35777775 999999999999 9998 77 45789999999999999999874 2 568999999999999
Q ss_pred HHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhccc--Ccchhhcc-cccccccchhhHHHHHHHHHHHHHHHHHHH
Q 045977 191 NLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKL--GVSKVFSF-RTKMDLHGIGKKLRDVFWRYDELLEKMMTD 267 (311)
Q Consensus 191 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~-l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (311)
|+++.++||.+++. ++.+...+.+.+.......... .+...+|+ +++++ ...++..++.+.+.+++.+.|++
T Consensus 158 ~vi~~~~fG~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~~~~~lp--~~~~~~~~~~~~~~~~~~~~i~~ 232 (476)
T 1po5_A 158 NIICSIVFGKRFDY---KDPVFLRLLDLFFQSFSLISSFSSQVFELFSGFLKHFP--GTHRQIYRNLQEINTFIGQSVEK 232 (476)
T ss_dssp HHHHHHHHSSCCCT---TCHHHHHHHHHHHHHTTTCCTTHHHHHHHTHHHHHTSS--CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHcCCCCCC---CCHHHHHHHHHHHHHHhhhcchhhHHHHhhhHHHHhcC--cHHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999875 2333334443333333211111 12235565 44443 23456777888999999999999
Q ss_pred HHhhcCCCCCCCCCCCHHHHHHHhcccc--CCccccCHhhhhhhc
Q 045977 268 YEDDNGIKDQENDDGDLMGILLETCRDE--NSEVTLTRNQIKYFV 310 (311)
Q Consensus 268 ~~~~~~~~~~~~~~~dll~~ll~~~~~~--~~~~~l~~~ei~~~i 310 (311)
+++..+ .+.+.|+++.|+....+. +.+..++++|+.+++
T Consensus 233 r~~~~~----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~~i~~~~ 273 (476)
T 1po5_A 233 HRATLD----PSNPRDFIDVYLLRMEKDKSDPSSEFHHQNLILTV 273 (476)
T ss_dssp HHTTCC----TTSCCSHHHHHHHHHHHHTCCTTCHHHHHHHHHHH
T ss_pred HHHhcC----CCCcccHHHHHHHHHHhhccCCCCCCCHHHHHHHH
Confidence 987643 344579999999653321 112358999987764
No 11
>3k9v_A 1,25-dihydroxyvitamin D(3) 24-hydroxylase, mitochondrial; mitochondrial cytochrome P450, monotopic membrane protein, monooxygenase; HET: HEM CPS; 2.50A {Rattus norvegicus} PDB: 3k9y_A*
Probab=99.98 E-value=2.7e-31 Score=228.97 Aligned_cols=260 Identities=15% Similarity=0.228 Sum_probs=193.1
Q ss_pred HhhcCCCCCCCCCCCCCCeecccccc-----CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccC
Q 045977 29 IKTFTKSYNFPPSPPALPIIGHSYLL-----SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFA 103 (311)
Q Consensus 29 ~~~~~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~ 103 (311)
++...++.+.+|||+++|++||++.+ .++++..+.+|+++||+||++++|+.++|+|+||+++++|+.++ ..|.
T Consensus 16 ~~~~~~pl~~~PGP~~~p~iG~~~~~~~~~~~~~~~~~~~~l~~~YG~i~~~~~g~~~~vvv~dp~~~~~il~~~-~~~~ 94 (482)
T 3k9v_A 16 TDGETRNVTDLPGPTNWPLLGSLLEIFWKGGLKKQHDTLAEYHKKYGQIFRMKLGSFDSVHLGSPSLLEALYRTE-SAHP 94 (482)
T ss_dssp ---CCEEGGGCCCSCCCTTTBTHHHHHHTTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHTC-CSSC
T ss_pred cccccCCCCCCCCCCCCCccccHHHHhccCCcccHHHHHHHHHHHcCCEEEEccCCCCEEEEcCHHHHHHHHHhc-CCCC
Confidence 44456788899999999999999887 24678999999999999999999999999999999999999874 4677
Q ss_pred CCCCCCc---ccccccCCCceEeccCChhHHHHHHHHHHHHh-cChhhhHHHHHHHHHHHHHHHHHHHHhcccc-CCCCC
Q 045977 104 SRYEPCP---SKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLF-AGPQQIDRFDKIREQEIDRLLKSLIMKNYSE-EGGPP 178 (311)
Q Consensus 104 ~~~~~~~---~~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f-~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~ 178 (311)
+++.... .....+.+.|+++.+ |+.|+++||.+. +.| + .+.++.+.+.+.++++.+++.+.+. +. . |++
T Consensus 95 ~r~~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~~~-~~f~~-~~~~~~~~~~i~~~~~~l~~~l~~~--~~~~-g~~ 168 (482)
T 3k9v_A 95 QRLEIKPWKAYRDHRNEAYGLMILE-GQEWQRVRSAFQ-KKLMK-PVEIMKLDKKINEVLADFLERMDEL--CDER-GRI 168 (482)
T ss_dssp CCCCCHHHHHHHHHHTCCCCTTTCC-HHHHHHHHHHHH-HHHTC-HHHHGGGHHHHHHHHHHHHHHHHHH--CCTT-SCC
T ss_pred CCCCchHHHHHHHhcCCCCCceeCC-CchHHHHHHHhh-HHhcC-hHHHHHHHHHHHHHHHHHHHHHHHH--HhcC-CCC
Confidence 7664321 122222345777775 999999999999 876 7 8889999999999999999999875 33 3 668
Q ss_pred ccchHHHHHHHHHHHHHHHhccccCcccc-chHHHHHHHHHHHHHHHHhcccCcchhhc--ccccccccchhhHHHHHHH
Q 045977 179 CNLGTEVTNMTNNLIFRMIMNKKRISENE-IENEAKMMRKLVVEMMGLAAKLGVSKVFS--FRTKMDLHGIGKKLRDVFW 255 (311)
Q Consensus 179 ~d~~~~~~~~~~~vi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P--~l~~~~~~~~~~~~~~~~~ 255 (311)
+|+.+.+..+++|+++.++||.+++..+. ...+...+.+.+..+...... ...+| ++.+++ ....++..++.+
T Consensus 169 vd~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~~~~~l~-~~~~~~~~~~~~ 244 (482)
T 3k9v_A 169 PDLYSELNKWSFESICLVLYEKRFGLLQKETEEEALTFITAIKTMMSTFGK---MMVTPVELHKRLN-TKVWQAHTLAWD 244 (482)
T ss_dssp TTHHHHHHHHHHHHHHHHHHSCCCCSSSTTSTTSSHHHHHHHHHHHTTGGG---GSSSCHHHHHHHT-CHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHHHHcccccCCCCCCcchHHHHHHHHHHHHHHHHHH---HHhhhHHHHHhcC-CHHHHHHHHHHH
Confidence 99999999999999999999999965311 112334566666555543332 12233 223332 233456667778
Q ss_pred HHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 256 RYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 256 ~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.+.+++.+.|++++++.. .....|++..++... .++++|+.+++
T Consensus 245 ~~~~~~~~~i~~r~~~~~----~~~~~d~l~~ll~~~-------~l~~~ei~~~~ 288 (482)
T 3k9v_A 245 TIFKSVKPCIDNRLQRYS----QQPGADFLCDIYQQD-------HLSKKELYAAV 288 (482)
T ss_dssp HHHHHHHHHHHHHHHHTT----TCTTSCHHHHHHHHT-------CCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhc----cCCchHHHHHHHhcc-------CCCHHHHHHHH
Confidence 888999999999887654 344578888888651 28899887764
No 12
>3gw9_A Sterol 14alpha-demethylase; CYP51, cytochrome P450, heme, oxidoreductase, monooxygenase, sterol biosynthesis, lipids, endoplasmic reticulum; HET: HEM VNI; 1.87A {Trypanosoma brucei} PDB: 3tik_A* 3g1q_A* 3p99_A* 2wv2_A* 2x2n_A* 3khm_A* 3k1o_A* 3ksw_A* 2wx2_A* 2wuz_A* 3l4d_A*
Probab=99.97 E-value=1.2e-31 Score=229.21 Aligned_cols=254 Identities=13% Similarity=0.168 Sum_probs=196.8
Q ss_pred CCCCCCCCC-CCeeccccccCCChhHHHHHHHHHhC-CceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccc
Q 045977 36 YNFPPSPPA-LPIIGHSYLLSSKLPESLQTLARRYG-PLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKY 113 (311)
Q Consensus 36 ~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 113 (311)
.+.||||++ +|++||++.+.++++.++.+++++|| +||++++++.++|+|+||+++++++.++...|.+++.......
T Consensus 2 ~~~PPg~p~~~P~iG~~~~~~~~~~~~~~~~~~~yG~~i~~~~~~~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~~ 81 (450)
T 3gw9_A 2 GKLPPVYPVTVPILGHIIQFGKSPLGFMQECKRQLKSGIFTINIVGKRVTIVGDPHEHSRFFLPRNEVLSPREVYSFMVP 81 (450)
T ss_dssp CSCCCBCCCCSTTTBTHHHHHHCHHHHHHHHHHHHTCSEEEEEETTEEEEEECCGGGTHHHHSSCTTTEESTGGGGGGHH
T ss_pred CCCCCCCCCCcchhccHHHHccCHHHHHHHHHHHhCCCeEEEEECCEeEEEEeCHHHHHHHHhCChhhccchhhHHHHHH
Confidence 467898665 99999999887789999999999999 9999999999999999999999999887777777765443333
Q ss_pred cccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHH-HHHHhccccCCCCCccchHHHHHHHHHH
Q 045977 114 NIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLK-SLIMKNYSEEGGPPCNLGTEVTNMTNNL 192 (311)
Q Consensus 114 ~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~-~l~~~~~~~~~~~~~d~~~~~~~~~~~v 192 (311)
..+ .|+++..+|+.|+++|++++ ++|+ ...++.+.+.+.+++..+++ .|... ++.+|+.+.+..+++++
T Consensus 82 ~~g--~~~~~~~~~~~~~~~R~~~~-~~f~-~~~l~~~~~~i~~~~~~ll~~~~~~~------~~~vd~~~~~~~~~~~~ 151 (450)
T 3gw9_A 82 VFG--EGVAYAAPYPRMREQLNFLA-EELT-IAKFQNFVPAIQHEVRKFMAANWDKD------EGEINLLEDCSTMIINT 151 (450)
T ss_dssp HHC--TTSGGGSCHHHHHHHHHHHH-HTTS-GGGCTTHHHHHHHHHHHHHHHHSCSS------EEEEEHHHHHHHHHHHH
T ss_pred Hhc--CCcccCCCcHHHHHHHHHHH-HHHh-HHHHHHHHHHHHHHHHHHHHHHhccC------CCcccHHHHHHHHHHHH
Confidence 333 46666556999999999999 9999 99999999999999999998 65533 44799999999999999
Q ss_pred HHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 045977 193 IFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDN 272 (311)
Q Consensus 193 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 272 (311)
++.++||.+++.. . +...+.+.+..+..... ....++|++.++|. +..++..++.+.+.+++.++|+++++..
T Consensus 152 i~~~~fG~~~~~~--~--~~~~~~~~~~~~~~~~~--~~~~~~P~l~~lp~-~~~~~~~~~~~~~~~~~~~~i~~r~~~~ 224 (450)
T 3gw9_A 152 ACQCLFGEDLRKR--L--DARRFAQLLAKMESSLI--PAAVFLPILLKLPL-PQSARCHEARTELQKILSEIIIARKEEE 224 (450)
T ss_dssp HHHHHSCHHHHHH--S--CHHHHHHHHHHHHHTCC--GGGGTCGGGGGSCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHcCcchhhh--h--hhHHHHHHHHHHHhccc--cchhcccchhccCC-chhHHHHHHHHHHHHHHHHHHHHHHHhh
Confidence 9999999988642 1 13345555554433222 23456788877653 3456677888899999999999988653
Q ss_pred CCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 273 GIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 273 ~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.. . .....|+++.|+++..+++ ..++++++.+++
T Consensus 225 ~~-~-~~~~~d~l~~ll~~~~~~~--~~l~~~~i~~~~ 258 (450)
T 3gw9_A 225 VN-K-DSSTSDLLSGLLSAVYRDG--TPMSLHEVCGMI 258 (450)
T ss_dssp HH-T-SCCCCSHHHHHHHCBCTTS--CBCCHHHHHHHH
T ss_pred cc-c-CCccchHHHHHHHhhccCC--CCCCHHHHHHHH
Confidence 10 1 3556899999998754433 459999988764
No 13
>3tbg_A Cytochrome P450 2D6; monooxygenase, thioridazine, oxidoreductase; HET: RTZ HEM; 2.10A {Homo sapiens} PDB: 3qm4_A* 2f9q_A*
Probab=99.97 E-value=9.9e-30 Score=218.99 Aligned_cols=262 Identities=16% Similarity=0.247 Sum_probs=187.2
Q ss_pred CCCCCCCCCCCCCeecccccc-CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCccc
Q 045977 34 KSYNFPPSPPALPIIGHSYLL-SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSK 112 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~ 112 (311)
++.++||||+++|++||++++ ..+++..+.+|+++|||||++++|+.++|+|+||+++++|+.+++..|+.++......
T Consensus 7 s~~kLPPGP~~lP~iGn~~~~~~~~~~~~~~~~~~kYG~i~~~~~g~~~~vvv~~p~~i~~vl~~~~~~f~~r~~~~~~~ 86 (479)
T 3tbg_A 7 SKGKLPPGPLPLPGLGNLLHVDFQNTPYCFDQLRRRFGDVFSLQLAWTPVVVLNGLAAVREALVTHGEDTADRPPVPITQ 86 (479)
T ss_dssp --CCCCCCSCCBTTTBTGGGCCTTSHHHHHHHHHHHHCSEEEEEETTEEEEEEEHHHHHHHHHTTTGGGSCBCCCCGGGG
T ss_pred CCCCCCCCCCCcCcccchHhhcCCCHHHHHHHHHHHhCCEEEEEECCeeEEEECCHHHHHHHHHhCChhhcCCCchHHHH
Confidence 455799999999999999998 6788999999999999999999999999999999999999998888888887665554
Q ss_pred cccc--CCCceEeccCChhHHHHHHHHHHHHhcChhhhHH--HHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHH
Q 045977 113 YNIY--DGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDR--FDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNM 188 (311)
Q Consensus 113 ~~~~--~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~--~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~ 188 (311)
.+.. .+.+++++.+|+.|+.+|+.+. +.|+ ...+.. +.+.+......+...+... . +..+|+.+.+..+
T Consensus 87 ~~~~~~~~~~~~~~~~g~~w~~~R~~~~-~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~----~-~~~~~~~~~~~~~ 159 (479)
T 3tbg_A 87 ILGFGPRSQGVFLARYGPAWREQRRFSV-STLR-NLGLGKKSLEQWVTEEAACLCAAFANH----S-GRPFRPNGLLDKA 159 (479)
T ss_dssp GGTCBTTBCCSTTCCSSHHHHHHHHHHH-HHHH-HTTSTTCHHHHHHHHHHHHHHHHHHTT----T-TCCBCTHHHHHHH
T ss_pred HhccCCCCCceeeCCCCHHHHHHHHHHH-HHhc-chhhhHHHHHHHHHHHHHHHHHHHHhc----c-CCcccHHHHHHHH
Confidence 4332 2346667777999999999999 8887 666643 5566666666677666654 3 5689999999999
Q ss_pred HHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhccc--CcchhhcccccccccchhhHHHHHHHHHHHHHHHHHH
Q 045977 189 TNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKL--GVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMT 266 (311)
Q Consensus 189 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 266 (311)
++++++.++||.+++. .+.....+.............. ......|+..++ ....++.....+...+.+.+.++
T Consensus 160 ~~~~~~~~~fg~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~ 234 (479)
T 3tbg_A 160 VSNVIASLTCGRRFEY---DDPRFLRLLDLAQEGLKEESGFLREVLNAVPVLLHI--PALAGKVLRFQKAFLTQLDELLT 234 (479)
T ss_dssp HHHHHHHHHHSCCCCT---TCHHHHHHHHHHHHHHHTTSSHHHHHHHHSGGGGGS--HHHHHHHTHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCcccc---cchhhhhhhhhhhhhhhhhhhhhhhhhcccchhccc--hhhHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999987 3434444444444443332211 011222333333 23334555566677777888887
Q ss_pred HHHhhcCCCCCCCCCCCHHHHHHHhccc--cCCccccCHhhhhhhc
Q 045977 267 DYEDDNGIKDQENDDGDLMGILLETCRD--ENSEVTLTRNQIKYFV 310 (311)
Q Consensus 267 ~~~~~~~~~~~~~~~~dll~~ll~~~~~--~~~~~~l~~~ei~~~i 310 (311)
++.+..+. .....|+++.++..... .+.+..++++++.+++
T Consensus 235 ~~~~~~~~---~~~~~d~~~~~~~~~~~~~~~~~~~l~~~~i~~~~ 277 (479)
T 3tbg_A 235 EHRMTWDP---AQPPRDLTEAFLAEMEKAKGNPESSFNDENLRIVV 277 (479)
T ss_dssp HHHHHCCT---TSCCCSHHHHHHHHHHHTTTCTTCSCSHHHHHHHH
T ss_pred HHHHhhhc---ccccchhhhhhhhhhhhcccCCccchhhHHHHHHH
Confidence 77766441 34567888777654222 2223469999988765
No 14
>3nxu_A Cytochrome P450 3A4; alpha beta protein, cytochrome P450 fold, hemoprotein, monoo cytochrome P450 reductase, endoplasmic reticulum; HET: HEM RIT; 2.00A {Homo sapiens} SCOP: a.104.1.1 PDB: 1w0e_A* 1w0g_A* 2j0d_A* 2v0m_A* 1w0f_A* 1tqn_A* 3ua1_A* 3tjs_A*
Probab=99.97 E-value=7.8e-32 Score=232.42 Aligned_cols=258 Identities=15% Similarity=0.191 Sum_probs=178.3
Q ss_pred CCCCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhC-CcccCCCCCCCccccc
Q 045977 36 YNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTH-DLDFASRYEPCPSKYN 114 (311)
Q Consensus 36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~-~~~~~~~~~~~~~~~~ 114 (311)
.+.||||+++|++||++.+.++++.++.+|+++|||||++++|+.++|+|+||+++++|+.++ ...|.+++...... .
T Consensus 13 ~~~~PGP~~~PliGn~~~~~~~~~~~~~~~~~~yG~i~~~~~g~~~~vvv~dp~~i~~il~~~~~~~f~~r~~~~~~~-~ 91 (485)
T 3nxu_A 13 KLGIPGPTPLPFLGNILSYHKGFCMFDMECHKKYGKVWGFYDGQQPVLAITDPDMIKTVLVKECYSVFTNRRPFGPVG-F 91 (485)
T ss_dssp HHTCCCCCCBTTTBTGGGGGGCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTTTTTTTCCCCCCCSCCG-G
T ss_pred hCCCCCCCCcCeecCcHHhhcChHHHHHHHHHHcCCeEEEEeCCCCEEEECCHHHHHHHHhccchhhccCCccccccc-c
Confidence 356899999999999999977899999999999999999999999999999999999999876 45677665543332 2
Q ss_pred ccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHHHH
Q 045977 115 IYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIF 194 (311)
Q Consensus 115 ~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~vi~ 194 (311)
. +.++++.+ |+.|+++|++++ ++|+ +.+++.+.+.+.++++.+++.+... ..+ |.++|+.+.+..+++|+++
T Consensus 92 ~--~~~l~~~~-g~~w~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~--~~~-g~~~d~~~~~~~~~~dvi~ 163 (485)
T 3nxu_A 92 M--KSAISIAE-DEEWKRLRSLLS-PTFT-SGKLKEMVPIIAQYGDVLVRNLRRE--AET-GKPVTLKDVFGAYSMDVIT 163 (485)
T ss_dssp G--GGSTTTCC-HHHHHHHHHHHG-GGGC-HHHHHHHHHHHHHHHHHHHHHHHHH--HHH-TCCEEHHHHHHHHHHHHHH
T ss_pred c--ccCccccC-CcHHHHHHhhcC-hhcC-HHHHHHHHHHHHHHHHHHHHHHHHH--hcc-CCcCcHHHHHHHHHHHHHH
Confidence 2 24666665 999999999999 9999 9999999999999999999999764 334 7789999999999999999
Q ss_pred HHHhccccCccccchHHHHHHHHHHHHHHHHhcc---cCcchhhcccccc-cccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045977 195 RMIMNKKRISENEIENEAKMMRKLVVEMMGLAAK---LGVSKVFSFRTKM-DLHGIGKKLRDVFWRYDELLEKMMTDYED 270 (311)
Q Consensus 195 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~P~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 270 (311)
.++||.+++..+. ..+.+.+........... ......+|++..+ .+.+.........+.+.+.+++.++++.+
T Consensus 164 ~~~fG~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 240 (485)
T 3nxu_A 164 STSFGVNIDSLNN---PQDPFVENTKKLLRFDFLDPFFLSITVFPFLIPILEVLNICVFPREVTNFLRKSVKRMKESRLE 240 (485)
T ss_dssp HHHHSCCCCGGGC---TTCHHHHHHTTSCCCCTTSHHHHHHHHCTTHHHHHHHTTCCSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCccccccC---CCcHHHHHHHHHhchhhHHHHHHHHHHhhhhHHHHHHhhhhhchHHHHHHHHHHHHHHHHHHHh
Confidence 9999999986421 112233222221110000 0011233433221 00010111123344556666666666644
Q ss_pred hcCCCCCCCCCCCHHHHHHHhccccC--CccccCHhhhhhhc
Q 045977 271 DNGIKDQENDDGDLMGILLETCRDEN--SEVTLTRNQIKYFV 310 (311)
Q Consensus 271 ~~~~~~~~~~~~dll~~ll~~~~~~~--~~~~l~~~ei~~~i 310 (311)
.. .....|+++.|++...+.+ .+..++++|+.+++
T Consensus 241 ~~-----~~~~~d~l~~ll~~~~~~~~~~~~~l~~~ei~~~~ 277 (485)
T 3nxu_A 241 DT-----QKHRVDFLQLMIDSQNSKETESHKALSDLELVAQS 277 (485)
T ss_dssp CC--------CCCHHHHHHHHHC--------CCCHHHHHHHH
T ss_pred cc-----CCCcccHHHHHHHhhhccccccccCCCHHHHHHHH
Confidence 31 3456799999998744321 12459999988764
No 15
>3ld6_A Lanosterol 14-alpha demethylase; cytochrome P450, ketoconazole, S genomics, structural genomics consortium, SGC; HET: HEM KKK BCD; 2.80A {Homo sapiens} PDB: 3juv_A* 3jus_A*
Probab=99.97 E-value=1.1e-31 Score=229.82 Aligned_cols=247 Identities=13% Similarity=0.152 Sum_probs=187.1
Q ss_pred CCCCCCCCCC-CCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcc-c
Q 045977 35 SYNFPPSPPA-LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPS-K 112 (311)
Q Consensus 35 ~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~-~ 112 (311)
..+.||+|++ +|++||++++.++++.++.+++++|||||++++++.++|+|+||+++++++.+++..|.+++..... .
T Consensus 9 g~~~PP~~~~~lP~iG~~~~~~~~~~~~~~~~~~kYG~i~~~~~~~~~~vvv~~~~~i~~il~~~~~~~~~~~~~~~~~~ 88 (461)
T 3ld6_A 9 GVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRLTT 88 (461)
T ss_dssp -CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHHHH
T ss_pred CCCCCCCCCCCcCeeeeHHHhhhCHHHHHHHHHHHhCCEEEEEECCccEEEEeCHHHHHHHHhCCccccCCCcchhhhhh
Confidence 4456888875 9999999999888999999999999999999999999999999999999998877777766543222 2
Q ss_pred ccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHH
Q 045977 113 YNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNL 192 (311)
Q Consensus 113 ~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~v 192 (311)
...+ .++++..+|+.|+++|++++ ++|+ ...++.+.+.+.+++.++++.|.+. ..+|+.+.+..+++++
T Consensus 89 ~~~g--~~~~~~~~~~~~~~~R~~~~-~~f~-~~~l~~~~~~i~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 157 (461)
T 3ld6_A 89 PVFG--KGVAYDVPNPVFLEQKKMLK-SGLN-IAHFKQHVSIIEKETKEYFESWGES-------GEKNVFEALSELIILT 157 (461)
T ss_dssp HHHC--TTSGGGSCHHHHHHHHHHHH-HHSS-HHHHHHHHHHHHHHHHHHGGGGCSE-------EEEEHHHHHHHHHHHH
T ss_pred ccCC--CccccCCCcHHHHHHHHhcc-cccc-HHHHhhhhHHHHHHHHHHHHHHhhc-------CCccHHHHHHHHHHHH
Confidence 2222 46666556999999999999 9999 9999999999999999998888653 3689999999999999
Q ss_pred HHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 045977 193 IFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDN 272 (311)
Q Consensus 193 i~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 272 (311)
++.++||.+++.. ..+. +......+...+.. ....+|. +++ .+..++..++.+++.+++.+.|++++++
T Consensus 158 i~~~~fG~~~~~~--~~~~---~~~~~~~~~~~~~~--~~~~~~~--~~~-~~~~~~~~~~~~~l~~~~~~~i~~r~~~- 226 (461)
T 3ld6_A 158 ASHCLHGKEIRSQ--LNEK---VAQLYADLDGGFSH--AAWLLPG--WLP-LPSFRRRDRAHREIKDIFYKAIQKRRQS- 226 (461)
T ss_dssp HHHHHTCHHHHHT--CCHH---HHHHHHHHHTTSSH--HHHHSCT--TSC-CHHHHHHHHHHHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHcCcchhhh--hhhh---hhhhhhhhhhhhhh--HHHhhhh--hcc-CcHHHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 9999999987653 2222 22222222221111 1122332 222 2345667778889999999999988865
Q ss_pred CCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 273 GIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 273 ~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.+..+|+++.|+++..+++ ..+|++|+.+++
T Consensus 227 -----~~~~~d~l~~ll~~~~~~~--~~ls~~ei~~~~ 257 (461)
T 3ld6_A 227 -----QEKIDDILQTLLDATYKDG--RPLTDDEVAGML 257 (461)
T ss_dssp -----CCCCCSHHHHHHTCBCTTS--CBCCHHHHHHHH
T ss_pred -----CCCCcchhhhhHHhhhccc--CCCCHHHHHHHH
Confidence 4566899999998765543 459999998765
No 16
>2ij2_A Cytochrome P450 BM3; monoxygenase, heme binding protein, atomic resolution, oxidoreductase; HET: HEM; 1.20A {Bacillus megaterium} SCOP: a.104.1.1 PDB: 2hpd_A* 1fag_A* 1jpz_A* 1zo9_A* 1zo4_A* 1zoa_A* 3m4v_A* 3ekb_A* 3ben_A* 1fah_A* 2nnb_A* 3kx3_A* 3ekd_A* 3ekf_A* 1smi_A* 1smj_A* 3kx4_A* 2ij3_A* 2ij4_A* 3hf2_A* ...
Probab=99.97 E-value=9.2e-30 Score=218.35 Aligned_cols=253 Identities=14% Similarity=0.184 Sum_probs=183.1
Q ss_pred CCCCCCCCCCeecccccc-CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCccccc-
Q 045977 37 NFPPSPPALPIIGHSYLL-SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYN- 114 (311)
Q Consensus 37 ~~ppgp~~~p~~G~~~~~-~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~- 114 (311)
+.||||+++|++||++.+ ..+++..+.+++++|||||++++++.+.|+|++|+++++|+.+. .|.+... .....+
T Consensus 3 ~~~PGP~~~p~iG~l~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~~~~~~~il~~~--~f~~~~~-~~~~~~~ 79 (470)
T 2ij2_A 3 KEMPQPKTFGELKNLPLLNTDKPVQALMKIADELGEIFKFEAPGRVTRYLSSQRLIKEACDES--RFDKNLS-QALKFVR 79 (470)
T ss_dssp CCCCCCCCCGGGTTGGGGCSSCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHTCTT--TEEECCC-HHHHHHH
T ss_pred CCCCCCCCCCccccHHHHhcccchHHHHHHHHHhCCeEEEecCCccEEEECCHHHHHHHHhhc--CcCcCch-hHHHHHH
Confidence 568999999999999988 46788899999999999999999999999999999999999642 2433221 111111
Q ss_pred ccCCCceEec-cCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHHH
Q 045977 115 IYDGSGFVTG-PYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLI 193 (311)
Q Consensus 115 ~~~~~~l~~~-~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~vi 193 (311)
...+.|+++. .+|+.|+++||+++ ++|+ +.+++.+.+.+.++++++++.|... . . +.++|+.+.+..+++|++
T Consensus 80 ~~~~~~l~~~~~~g~~w~~~Rr~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~--~-~-~~~vd~~~~~~~~~~~vi 153 (470)
T 2ij2_A 80 DFAGDGLFTSWTHEKNWKKAHNILL-PSFS-QQAMKGYHAMMVDIAVQLVQKWERL--N-A-DEHIEVPEDMTRLTLDTI 153 (470)
T ss_dssp HHHTTSGGGSCTTSHHHHHHHHHHG-GGGS-TTTHHHHHHHHHHHHHHHHHHHHTC--C-T-TCCEEHHHHHHHHHHHHH
T ss_pred HhcCCceEEcCCCchHHHHHHHHhc-cccC-HHHHHHHHHHHHHHHHHHHHHHHhh--C-C-CCeEEHHHHHHHHHHHHH
Confidence 1112467766 46999999999999 9999 9999999999999999999999763 2 2 557999999999999999
Q ss_pred HHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcC
Q 045977 194 FRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNG 273 (311)
Q Consensus 194 ~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 273 (311)
+.++||.+++... ..+...+...+...+....... ...|++.+++ ....++..++.+.+.+++.++|++++++
T Consensus 154 ~~~~fG~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~-- 226 (470)
T 2ij2_A 154 GLCGFNYRFNSFY--RDQPHPFITSMVRALDEAMNKL--QRANPDDPAY-DENKRQFQEDIKVMNDLVDKIIADRKAS-- 226 (470)
T ss_dssp HHHHHSCCCCGGG--CSSCCHHHHHHHHHHHHHHHTC-----CTTSGGG-HHHHHHHHHHHHHHHHHHHHHHHHHHHH--
T ss_pred HHHHcCCcccccc--cCCCCHHHHHHHHHHHHHHHHH--hhhhhHhhcc-chHHHHHHHHHHHHHHHHHHHHHHHHhc--
Confidence 9999999987521 1112233333333333221110 0113443332 2234556677788999999999998875
Q ss_pred CCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 274 IKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 274 ~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
...+.|+++.|++.... +++..++++||.+++
T Consensus 227 ----~~~~~dll~~ll~~~~~-~~~~~ls~~ei~~~~ 258 (470)
T 2ij2_A 227 ----GEQSDDLLTHMLNGKDP-ETGEPLDDENIRYQI 258 (470)
T ss_dssp ----CCCCSSHHHHHHHCCCT-TTCCCCCHHHHHHHH
T ss_pred ----ccCchhHHHHHHhccCc-ccCCCCCHHHHHHHH
Confidence 34457999999987432 122459999988765
No 17
>2ve3_A Putative cytochrome P450 120; oxidoreductase, monooxygenase, metal-binding, heme, iron; HET: HEM REA; 2.10A {Synechocystis SP} PDB: 2ve4_A*
Probab=99.96 E-value=5.3e-29 Score=212.18 Aligned_cols=242 Identities=16% Similarity=0.209 Sum_probs=178.2
Q ss_pred cCCCCCCCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcc
Q 045977 32 FTKSYNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPS 111 (311)
Q Consensus 32 ~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~ 111 (311)
..++.+.||||+++|++||++.+..+++ ++.+++++|||||+++++|.+.|+|++|+++++|+.++...|..+.. ...
T Consensus 7 ~~~~~~~pPgp~~~P~iG~~~~~~~~~~-~~~~~~~~yg~v~~~~~~g~~~vvv~~~~~~~~il~~~~~~~~~~~~-~~~ 84 (444)
T 2ve3_A 7 NLNSLPIPPGDFGLPWLGETLNFLNDGD-FGKKRQQQFGPIFKTRLFGKNVIFISGALANRFLFTKEQETFQATWP-LST 84 (444)
T ss_dssp --CCCCCCCCCCCBTTTBTHHHHHHCTT-HHHHHHHHHCSSEEEEETTEEEEEECSHHHHHHHTSSCTTTEEEECC-HHH
T ss_pred CCCCCCCCCCCCCCCccccHHHHhcCcH-HHHHHHHHcCCeEEEeeCCCCEEEEcCHHHHHHHHhCCCcccccchh-HHH
Confidence 3467789999999999999988744566 78899999999999998888899999999999999876554542211 111
Q ss_pred cccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHH
Q 045977 112 KYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNN 191 (311)
Q Consensus 112 ~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~ 191 (311)
..+.+. .++++.+ |+.|+++|++++ ++|+ +++++.+.+.+.++++.+++.|.. ++++|+.+.+..++++
T Consensus 85 ~~~~g~-~~l~~~~-g~~~~~~R~~~~-~~f~-~~~l~~~~~~i~~~~~~l~~~l~~-------~~~vd~~~~~~~~~~~ 153 (444)
T 2ve3_A 85 RILLGP-NALATQM-GEIHRSRRKILY-QAFL-PRTLDSYLPKMDGIVQGYLEQWGK-------ANEVIWYPQLRRMTFD 153 (444)
T ss_dssp HHHHCT-TSGGGCC-HHHHHHHHHHHH-GGGC-HHHHHTTHHHHHHHHHHHHHHHHH-------SSEEEHHHHHHHHHHH
T ss_pred HHHhCc-cccccCC-chHHHHHHHHHH-hhcC-HHHHHHHHHHHHHHHHHHHHHhcC-------CCcEeHHHHHHHHHHH
Confidence 222222 3666655 999999999999 9999 999999999999999999999964 5579999999999999
Q ss_pred HHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045977 192 LIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDD 271 (311)
Q Consensus 192 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 271 (311)
+++.++|| +... ++ ..+.+.+..+...... +|+ .+|.. ..++..++.+.+.+++.+.|++++++
T Consensus 154 vi~~~~fG-~~~~---~~---~~~~~~~~~~~~~~~~------~~~--~~p~~-~~~~~~~~~~~~~~~~~~~i~~r~~~ 217 (444)
T 2ve3_A 154 VAATLFMG-EKVS---QN---PQLFPWFETYIQGLFS------LPI--PLPNT-LFGKSQRARALLLAELEKIIKARQQQ 217 (444)
T ss_dssp HHHHHHTC-HHHH---SC---TTHHHHHHHHHHHHSS------CCC--CSTTS-HHHHHHHHHHHHHHHHHHHHHHHHTS
T ss_pred HHHHHHcC-CCcc---cH---HHHHHHHHHHHHHHhc------CCc--cCCCc-HHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 99999999 3332 11 2333434333332211 121 11211 23456677888999999999998865
Q ss_pred cCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 272 NGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 272 ~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.....|+++.|+++..+++ ..++++|+.+++
T Consensus 218 ------~~~~~d~l~~ll~~~~~~~--~~l~~~~i~~~~ 248 (444)
T 2ve3_A 218 ------PPSEEDALGILLAARDDNN--QPLSLPELKDQI 248 (444)
T ss_dssp ------CCCCSSHHHHHHHCBCTTS--CBCCHHHHHHHH
T ss_pred ------CCCccCHHHHHHhccccCC--CCCCHHHHHHHH
Confidence 3345799999998754322 459999988765
No 18
>3dbg_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP170A1, molecular mechanism, heme, iron, metal-binding, monooxygenase; HET: HEM; 2.60A {Streptomyces coelicolor A3} PDB: 3el3_A*
Probab=99.96 E-value=1.7e-29 Score=216.65 Aligned_cols=244 Identities=16% Similarity=0.229 Sum_probs=158.8
Q ss_pred CCCCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCccc-CCCCCCCccccc
Q 045977 36 YNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDF-ASRYEPCPSKYN 114 (311)
Q Consensus 36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~-~~~~~~~~~~~~ 114 (311)
...||||+++|++||++.+..+++.++.++++ |||||++++++.++++|+||+++++|+.++ .| .+++........
T Consensus 22 ~eppPgP~~~P~iG~~~~~~~~p~~~~~~l~~-yGpv~~~~~g~~~~~vv~~~~~i~~il~~~--~~~~~~~~~~~~~~~ 98 (467)
T 3dbg_A 22 REPPVAGGGVPLLGHGWRLARDPLAFMSQLRD-HGDVVRIKLGPKTVYAVTNPELTGALALNP--DYHIAGPLWESLEGL 98 (467)
T ss_dssp CBCCEECCCCSTTHHHHHHHHCHHHHHHHHGG-GCSEEEEEETTEEEEEECSHHHHHHHHHCT--TC-------------
T ss_pred CCCCCCCCCCCcccchHHhccCHHHHHHHHHH-hCCEEEEEeCCccEEEECCHHHHHHHHhCc--CcccccchHHHHHHh
Confidence 45688999999999999887789999999977 999999999999999999999999999876 45 343333222222
Q ss_pred ccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHHHH
Q 045977 115 IYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIF 194 (311)
Q Consensus 115 ~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~vi~ 194 (311)
.+ ..++++.+ |+.|+++|++++ ++|+ +.+++.+.+.+.++++.+++.|.. ++++|+.+.+..+++++++
T Consensus 99 ~g-~~~l~~~d-g~~h~~~R~~l~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~d~~~~~~~~~~~vi~ 167 (467)
T 3dbg_A 99 LG-KEGVATAN-GPLHRRQRRTIQ-PAFR-LDAIPAYGPIMEEEAHALTERWQP-------GKTVDATSESFRVAVRVAA 167 (467)
T ss_dssp -------------------CGGGH-HHHS-TTTSTTTHHHHHHHHHHHHHHSCT-------TSCEEHHHHHHHHHHHHHH
T ss_pred cC-CCCcccCC-cHHHHHHHHHhh-hhhC-HHHHHHHHHHHHHHHHHHHHHhcc-------CCcCcHHHHHHHHHHHHHH
Confidence 22 14666665 999999999999 9999 999999999999999999998854 5579999999999999999
Q ss_pred HHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcc--cccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc
Q 045977 195 RMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSF--RTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDN 272 (311)
Q Consensus 195 ~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~ 272 (311)
.++||.+++.. ....+...+..+..... ....+|+ +.+++ .+..++..++.+.+.+++.++|++++++
T Consensus 168 ~~~~g~~~~~~-----~~~~~~~~~~~~~~~~~---~~~~~p~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~- 237 (467)
T 3dbg_A 168 RCLLRGQYMDE-----RAERLCVALATVFRGMY---RRMVVPLGPLYRLP-LPANRRFNDALADLHLLVDEIIAERRAS- 237 (467)
T ss_dssp HHHSCSSCCHH-----HHHHHHHHHHHHHHC----------------------------CCHHHHHHHHHHHHHHHTTC-
T ss_pred HHHhCCcccch-----hHHHHHHHHHHHHHHHH---HHhccchhhhhhCC-ChHhHHHHHHHHHHHHHHHHHHHHHHhc-
Confidence 99999998741 34455555555544322 2223443 23332 2234566677788999999999988865
Q ss_pred CCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 273 GIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 273 ~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.....|+++.|++...+++ ..++++|+.+++
T Consensus 238 -----~~~~~dll~~ll~~~~~~~--~~ls~~ei~~~~ 268 (467)
T 3dbg_A 238 -----GQKPDDLLTALLEAKDDNG--DPIGEQEIHDQV 268 (467)
T ss_dssp -----CSSCCSHHHHHTTC----------CHHHHHHHH
T ss_pred -----CCCchHHHHHHHhhccCCC--CCCCHHHHHHHH
Confidence 4456799999998754332 359999988764
No 19
>3i3k_A Lanosterol 14-alpha demethylase; cytochrome P450, hemeprotein, alternative splicing, cholesterol biosynthesis, endoplasmic reticulum, heme, iron; HET: HEM KLN BCD; 2.80A {Homo sapiens} PDB: 3jus_A* 3juv_A* 3ld6_A*
Probab=99.96 E-value=1.5e-29 Score=216.76 Aligned_cols=249 Identities=13% Similarity=0.166 Sum_probs=184.7
Q ss_pred CCCCCCCCC-CCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCC-c
Q 045977 33 TKSYNFPPS-PPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPC-P 110 (311)
Q Consensus 33 ~~~~~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~ 110 (311)
.++.+.||| |+++|++||++.+.++++.++.+++++||+||++++++.+.|+|++|+++++++.++...+.+++... .
T Consensus 7 ~~~~~~PPg~P~~lP~iG~l~~~~~~~~~~~~~~~~~yG~v~~l~l~g~~~vvv~~~~~~~~il~~~~~~~~~~~~~~~~ 86 (461)
T 3i3k_A 7 PAGVKSPPYIFSPIPFLGHAIAFGKSPIEFLENAYEKYGPVFSFTMVGKTFTYLLGSDAAALLFNSKNEDLNAEDVYSRL 86 (461)
T ss_dssp ---CCCCCBCCCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEESHHHHHHH
T ss_pred CCCCCCCCCCCCCCCccccHHhhccCHHHHHHHHHHHhCCEEEEEecCceEEEEeChHHHHHHHhccccccccchHHHHh
Confidence 356678999 88999999999887789999999999999999999999999999999999999987765555433211 1
Q ss_pred ccccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHH
Q 045977 111 SKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTN 190 (311)
Q Consensus 111 ~~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~ 190 (311)
...+.+ .|+++..+|+.|+.+|+++. +.|+ ...++.+.+.+.+++.++++.|... + .+|+.+.+..+++
T Consensus 87 ~~~~~g--~g~~~~~~g~~w~~~Rr~~~-~~f~-~~~l~~~~~~~~~~~~~ll~~l~~~------~-~~dl~~~~~~~~~ 155 (461)
T 3i3k_A 87 TTPVFG--KGVAYDVPNPVFLEQKKMLK-SGLN-IAHFKQHVSIIEKETKEYFESWGES------G-EKNVFEALSELII 155 (461)
T ss_dssp HHHHHC--TTSGGGSCHHHHHHHHHHHH-HHSS-HHHHHHHHHHHHHHHHHHGGGGCSE------E-EEEHHHHHHHHHH
T ss_pred hhhhcC--CeeeeCCCcHHHHHHHHHHh-hhhC-HHHHHHHHHHHHHHHHHHHHHhhhc------C-CcCHHHHHHHHHH
Confidence 112222 46666656999999999999 9999 9999999999999999999888653 2 5899999999999
Q ss_pred HHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045977 191 NLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYED 270 (311)
Q Consensus 191 ~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 270 (311)
++++.++||.++... ... .+.+.+..+..... .....+| .+++ .+..++..++.+.+.+++.+.|+++++
T Consensus 156 ~~~~~~~~G~~~~~~--~~~---~~~~~~~~~~~~~~--~~~~~~P--~~l~-~~~~~~~~~~~~~~~~~~~~~i~~~~~ 225 (461)
T 3i3k_A 156 LTASHCLHGKEIRSQ--LNE---KVAQLYADLDGGFS--HAAWLLP--GWLP-LPSFRRRDRAHREIKDIFYKAIQKRRQ 225 (461)
T ss_dssp HHHHHHHTCHHHHHT--CCH---HHHHHHHHHHTTSS--HHHHHSC--TTSC-CHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHccHhhhhH--HHH---HHHHHHHHHHhccc--cchhhcc--cccC-CHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 999999999887542 111 22222322221111 0112233 2232 234566777888999999999999876
Q ss_pred hcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 271 DNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 271 ~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
. .+...|+++.|++...+++ ..++++++..++
T Consensus 226 ~------~~~~~d~l~~ll~~~~~~~--~~l~~~~i~~~~ 257 (461)
T 3i3k_A 226 S------QEKIDDILQTLLDATYKDG--RPLTDDEVAGML 257 (461)
T ss_dssp C------CCCCCSHHHHHHTCBCTTS--CBCCHHHHHHHH
T ss_pred c------ccccccHHHHHHHhhhccC--CCCCHHHHHHHH
Confidence 5 4456899999998754433 459999988764
No 20
>2cib_A Cytochrome P450 51; heme, heme lipid synthesis, metal-binding, monooxygenase, NADP, oxidoreductase, protein-inhibitor complex; HET: HEM CM6; 1.50A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 2bz9_A* 1x8v_A* 2ci0_A* 2vku_A* 2w09_A* 2w0b_A* 2w0a_A* 1h5z_A* 1ea1_A* 1e9x_A* 1u13_A*
Probab=99.96 E-value=1e-28 Score=211.10 Aligned_cols=244 Identities=13% Similarity=0.076 Sum_probs=164.3
Q ss_pred CCCCC-CCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccc
Q 045977 37 NFPPS-PPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNI 115 (311)
Q Consensus 37 ~~ppg-p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~ 115 (311)
+.||| |+++|++||++.+..+++..+.+++++|||||++++++.++++|++|+++++|+.+++..|++++.........
T Consensus 4 ~~PPg~p~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~~~~~~~vv~~~~~~~~il~~~~~~~~~~~~~~~~~~~~ 83 (455)
T 2cib_A 4 VALPRVSGGHDEHGHLEEFRTDPIGLMQRVRDELGDVGTFQLAGKQVVLLSGSHANEFFFRAGDDDLDQAKAYPFMTPIF 83 (455)
T ss_dssp -CCCBCSCCCBTTBTHHHHTTCHHHHHHHHHHHHCSEEEEEETTEEEEEECSHHHHHHHHHCCTTTEECTTSCGGGHHHH
T ss_pred CCCCCCCCCCCCccCHHHHhhChHHHHHHHHHHcCCEEEEEeCCceEEEECCHHHHHHHHhcCccccCcccchhHHHhhc
Confidence 57887 77899999999887889999999999999999999999999999999999999987665677665432222222
Q ss_pred cCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHHHHH
Q 045977 116 YDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFR 195 (311)
Q Consensus 116 ~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~vi~~ 195 (311)
+ .+++ .+ |+.|+++|++++ ++|+ +++++.+.+.+.++++.+++.|.. ++.+|+.+.+..+++++++.
T Consensus 84 g--~~~~-~~-~~~~~~~R~~~~-~~f~-~~~l~~~~~~i~~~~~~l~~~~~~-------~~~vd~~~~~~~~~~~vi~~ 150 (455)
T 2cib_A 84 G--EGVV-FD-ASPERRKEMLHN-AALR-GEQMKGHAATIEDQVRRMIADWGE-------AGEIDLLDFFAELTIYTSSA 150 (455)
T ss_dssp C-------------------------CC-HHHHHHHHHHHHHHHHHHHTTCCS-------EEEEEHHHHHHHHHHHHHHH
T ss_pred C--Cccc-cC-cHHHHHHHhhhc-cccC-HHHHHHHHHHHHHHHHHHHHHhCC-------CCcEeHHHHHHHHHHHHHHH
Confidence 2 3544 34 899999999999 9999 999999999999999999988643 33699999999999999999
Q ss_pred HHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 045977 196 MIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIK 275 (311)
Q Consensus 196 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 275 (311)
++||.+++.. .+ ..+.+.+..+..... .+..++||+ + .+..++..++.+.+.+++.++|++++++..
T Consensus 151 ~~fG~~~~~~--~~---~~~~~~~~~~~~~~~--~~~~~~p~l---~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-- 217 (455)
T 2cib_A 151 CLIGKKFRDQ--LD---GRFAKLYHELERGTD--PLAYVDPYL---P-IESFRRRDEARNGLVALVADIMNGRIANPP-- 217 (455)
T ss_dssp HHTCHHHHTT--CC---HHHHHHHHHHHTTCC--GGGGTCTTC---S-CHHHHHHHHHHHHHHHHHHHHHHHHHHCC---
T ss_pred HHcCCCcchh--hh---HHHHHHHHHHHhhhh--HHHHhcccC---C-ChhHHHHHHHHHHHHHHHHHHHHHHHhccc--
Confidence 9999998642 12 234444444322111 122234432 2 123455667788899999999999887532
Q ss_pred CCCC-CCCCHHHHHHHhccccCCccc-cCHhhhhhhc
Q 045977 276 DQEN-DDGDLMGILLETCRDENSEVT-LTRNQIKYFV 310 (311)
Q Consensus 276 ~~~~-~~~dll~~ll~~~~~~~~~~~-l~~~ei~~~i 310 (311)
.. ...|+++.|++...+++ .. ++++++.+++
T Consensus 218 --~~~~~~dll~~ll~~~~~~~--~~~l~~~~i~~~~ 250 (455)
T 2cib_A 218 --TDKSDRDMLDVLIAVKAETG--TPRFSADEITGMF 250 (455)
T ss_dssp ------CCCHHHHHHHCBCTTS--SBSCCHHHHHHHH
T ss_pred --CCCCcccHHHHHHHhhhhcC--CCCCCHHHHHHHH
Confidence 12 23499999998753322 34 8999988764
No 21
>3n9y_A Cholesterol SIDE-chain cleavage enzyme; cytochrome P450, cholesterol SIDE chain cleavage, structural genomics, structural genomics consortium, SGC; HET: HEM CLR; 2.10A {Homo sapiens} PDB: 3n9z_A* 3na1_A* 3na0_A* 3mzs_A*
Probab=99.96 E-value=8.4e-28 Score=207.37 Aligned_cols=262 Identities=14% Similarity=0.127 Sum_probs=183.5
Q ss_pred cCCCCCCCCCCCCCCeecccccc-----CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCC
Q 045977 32 FTKSYNFPPSPPALPIIGHSYLL-----SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRY 106 (311)
Q Consensus 32 ~~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~ 106 (311)
..++.+.+|||++.|+. +++.+ ..+++..+.+|+++|||||++++|+.+.|+|+||+++++|+.+++ .|.+++
T Consensus 4 ~~~pL~~~PGP~~~~~~-~~~~~~~~~~~~~~~~~~~~l~~kYG~i~~~~~g~~~~vvv~dp~~~~~il~~~~-~f~~r~ 81 (487)
T 3n9y_A 4 SPRPFNEIPSPGDNGWL-NLYHFWRETGTHKVHLHHVQNFQKYGPIYREKLGNVESVYVIDPEDVALLFKSEG-PNPERF 81 (487)
T ss_dssp CCBCGGGSCCSCSCHHH-HHHHHHHHTCGGGHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHHTCC-SSCCCC
T ss_pred CCCCHhhCCCCCCCChh-hHHHHHhcCCCcchhHHHHHHHHHcCceeeccCCCCCEEEEcCHHHHHHHHHhCC-CCCCCC
Confidence 34677889999987764 66655 236788999999999999999999999999999999999998664 577776
Q ss_pred CCCcc---cccccCCCceEeccCChhHHHHHHHHHHH-HhcChhhhHHHHHHHHHHHHHHHHHHHHhcc--ccCCCCCcc
Q 045977 107 EPCPS---KYNIYDGSGFVTGPYGAYWRFMKHLCVTK-LFAGPQQIDRFDKIREQEIDRLLKSLIMKNY--SEEGGPPCN 180 (311)
Q Consensus 107 ~~~~~---~~~~~~~~~l~~~~~g~~w~~~R~~~~~~-~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~d 180 (311)
..... ....+.+.|+++.+ |+.|+++|++++ + +|+ .++++.+.+.+.++++.+++.|..... .++ +.++|
T Consensus 82 ~~~~~~~~~~~~~~~~~l~~~~-g~~w~~~Rr~l~-~~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~~~~~~~~-~~~vd 157 (487)
T 3n9y_A 82 LIPPWVAYHQYYQRPIGVLLKK-SAAWKKDRVALN-QEVMA-PEATKNFLPLLDAVSRDFVSVLHRRIKKAGSG-NYSGD 157 (487)
T ss_dssp CCHHHHHHHHHTTCCCCGGGCC-HHHHHHHHHHHH-HHHTS-HHHHTTHHHHHHHHHHHHHHHHHHHHHHHTSS-SEEEC
T ss_pred CCcHHHHHHHHccccCCCccCC-cHHHHHHHHhcC-cccCC-chHHHHhhhHHHHHHHHHHHHHHHHhcccccC-CCCcc
Confidence 43321 11222345777665 999999999999 7 599 999999999999999999999976310 112 34799
Q ss_pred chHHHHHHHHHHHHHHHhccccCcccc-chHHHHHHHHHHHHHHHHhcccCcchhhcc--cccccccchhhHHHHHHHHH
Q 045977 181 LGTEVTNMTNNLIFRMIMNKKRISENE-IENEAKMMRKLVVEMMGLAAKLGVSKVFSF--RTKMDLHGIGKKLRDVFWRY 257 (311)
Q Consensus 181 ~~~~~~~~~~~vi~~~~fG~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~--l~~~~~~~~~~~~~~~~~~~ 257 (311)
+.+.+.++++|+++.++||.+++..+. .+.....+.+.+..+..... ....+|. +++++ .+..++.....+.+
T Consensus 158 ~~~~~~~~t~dvi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~p~~l~~~~~-~~~~~~~~~~~~~~ 233 (487)
T 3n9y_A 158 ISDDLFRFAFESITNVIFGERQGMLEEVVNPEAQRFIDAIYQMFHTSV---PMLNLPPDLFRLFR-TKTWKDHVAAWDVI 233 (487)
T ss_dssp CHHHHHHHHHHHHHHHHHSSCCCTTSSSCCHHHHHHHHHHHHHHHHHG---GGTTSCHHHHHHHC-HHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcccccccCCCCChHHHHHHHHHHHHHHHHH---HHHhcCHHHHhhcc-cHHHHHHHHHHHHH
Confidence 999999999999999999999975421 22344556666666555443 1223342 22222 22334455555666
Q ss_pred HHHHHHHHHHHHhhcCCCC-CCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 258 DELLEKMMTDYEDDNGIKD-QENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 258 ~~~~~~~i~~~~~~~~~~~-~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.+++.+.+++++++...+. ......|+++.|++. ..++++|+.+++
T Consensus 234 ~~~~~~~i~~~~~~~~~~~~~~~~~~d~l~~ll~~-------~~l~~~ei~~~~ 280 (487)
T 3n9y_A 234 FSKADIYTQNFYWELRQKGSVHHDYRGILYRLLGD-------SKMSFEDIKANV 280 (487)
T ss_dssp HHHHHHHHHHHHHHHHHHCCCCSSCCCHHHHHHHS-------CSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHhcCCcccchHHHHHHHHhc-------CCCCHHHHHHHH
Confidence 6777777766544321101 023457999999974 138899988765
No 22
>2cd8_A Cytochrome P450 monooxygenase; oxidoreductase, PIKC, macrolide monooxygenase, antibiotic biosynthesis, heme, iron, metal-binding; HET: HEM PXI; 1.7A {Streptomyces venezuelae} PDB: 2c6h_A* 2bvj_A* 2ca0_A* 2c7x_A* 2vzm_A* 2vz7_A* 2vsj_A* 2wi9_A* 2whw_A*
Probab=99.94 E-value=2e-26 Score=195.44 Aligned_cols=229 Identities=11% Similarity=0.172 Sum_probs=163.9
Q ss_pred CCCCCCCCCCCCCeecccc-ccCCChhHHHHHHHHHhCCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcc
Q 045977 34 KSYNFPPSPPALPIIGHSY-LLSSKLPESLQTLARRYGPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPS 111 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~-~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~ 111 (311)
+..+.||||+++|++|++. .+..+++..+.++ ++|||||++++ ++.++|+|++|+++++|+.++ .|.+++.....
T Consensus 23 ~~~~~~PGP~~~p~lG~~~~~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~ 99 (436)
T 2cd8_A 23 RTQQGTTASPPVLDLGALGQDFAADPYPTYARL-RAEGPAHRVRTPEGDEVWLVVGYDRARAVLADP--RFSKDWRNSTT 99 (436)
T ss_dssp -----------CCBHHHHHHHHHHCCHHHHHHH-HTTCSEEEEECSSCCEEEEECSHHHHHHHHHCT--TEECCGGGCSS
T ss_pred hhccCCCCCCccccCCCCCcccccChHHHHHHH-HHhCCeeeeccCCCCeEEEEcCHHHHHHHHcCC--CCccccccccc
Confidence 4557799999999999986 4466789999999 99999999997 778899999999999999866 46666531111
Q ss_pred ccc---ccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HH
Q 045977 112 KYN---IYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TN 187 (311)
Q Consensus 112 ~~~---~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~ 187 (311)
... ...+.++++.+ |+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... . ++++|+.+.+ ..
T Consensus 100 ~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~----~-~~~vd~~~~~~~~ 171 (436)
T 2cd8_A 100 PLTEAEAALNHNMLESD-PPRHTRLRKLVA-REFT-MRRVELLRPRVQEIVDGLVDAMLAA----P-DGRADLMESLAWP 171 (436)
T ss_dssp CCCTTGGGTCCSGGGCC-TTHHHHHHHHHG-GGSS-HHHHHTTHHHHHHHHHHHHHHHHTC----T-TSCEEHHHHTTTH
T ss_pred ccccccccccccccccC-chHHHHHHHHhH-HhhC-HHHHHHHHHHHHHHHHHHHHHHHhc----c-CCCcchHHHHHHH
Confidence 110 11234666654 999999999999 9999 9999999999999999999999842 2 5579999976 57
Q ss_pred HHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHH
Q 045977 188 MTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTD 267 (311)
Q Consensus 188 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (311)
+++++++. +||.+.+. .+.+..+...+.. . . + .++..++.+++.+++.++|++
T Consensus 172 ~~~~vi~~-~~G~~~~~-------~~~~~~~~~~~~~----~--~---~----------~~~~~~~~~~~~~~~~~~i~~ 224 (436)
T 2cd8_A 172 LPITVISE-LLGVPEPD-------RAAFRVWTDAFVF----P--D---D----------PAQAQTAMAEMSGYLSRLIDS 224 (436)
T ss_dssp HHHHHHHH-HHTCCGGG-------HHHHHHHHHHHHS----C--S---S----------TTHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHH-HhCCCHHH-------HHHHHHHHHHHhc----c--C---C----------HHHHHHHHHHHHHHHHHHHHH
Confidence 99999998 69987752 2234443333221 0 0 0 145667788899999999998
Q ss_pred HHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 268 YEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 268 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
++++ ..+|+++.|+++..+++ ..++++|+.+++
T Consensus 225 r~~~--------~~~d~l~~ll~~~~~~~--~~ls~~ei~~~~ 257 (436)
T 2cd8_A 225 KRGQ--------DGEDLLSALVRTSDEDG--SRLTSEELLGMA 257 (436)
T ss_dssp HTTS--------CCCSHHHHHHHHHHHCT--TTSCHHHHHHHH
T ss_pred HhcC--------CCCCHHHHHHHhhhccC--CCCCHHHHHHHH
Confidence 8753 23699999998754322 459999988765
No 23
>3awm_A Fatty acid alpha-hydroxylase; cytochrome P450, peroxygenase, oxidoreductase; HET: HEM PLM; 1.65A {Sphingomonas paucimobilis} PDB: 3awq_A* 3awp_A*
Probab=99.93 E-value=9.3e-25 Score=184.41 Aligned_cols=229 Identities=13% Similarity=0.052 Sum_probs=165.4
Q ss_pred CCCCCCCCeeccccccCCChhHHHHHHHHHh-CCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCC--cccccc
Q 045977 39 PPSPPALPIIGHSYLLSSKLPESLQTLARRY-GPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPC--PSKYNI 115 (311)
Q Consensus 39 ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~y-G~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~--~~~~~~ 115 (311)
|||| |++||+..+..+++.++.+++++| ||||++.+++.+++++++|+.++ ++.+. ..|++++... ....+.
T Consensus 4 pPg~---P~iG~~~~~~~~p~~~~~~l~~~y~gpv~~~~~~g~~~~vv~~~~~~~-~l~~~-~~f~~~~~~~~~~~~~~~ 78 (415)
T 3awm_A 4 TPHT---KGPDETLSLLADPYRFISRQCQRLGANAFESRFLLKKTNCLKGAKAAE-IFYDT-TRFEREGAMPVAIQKTLL 78 (415)
T ss_dssp --------CCCCHHHHHHSTTTHHHHHHHHHTSSEEEEEETTEEEEEEESHHHHH-HHTCT-TTEECTTCSCHHHHTTTS
T ss_pred CCCC---CccchHHHHHhChHHHHHHHHHHhCCCeEEEecCCCcEEEEeCHHHHH-HHhcc-cccccccccchhhhhhcc
Confidence 6666 899999888778999999999999 79999998888999999999986 66544 3465543322 111222
Q ss_pred cCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHHHHH
Q 045977 116 YDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFR 195 (311)
Q Consensus 116 ~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~vi~~ 195 (311)
+ ..++++.+ |+.|+++|++++ ++|+ ++.++.+.+.+.+.++++++.|... + ++|+.+.+..+++++++.
T Consensus 79 g-~~~l~~~d-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~~~~~------~-~vdl~~~~~~~~~~vi~~ 147 (415)
T 3awm_A 79 G-QGGVQGLD-GETHRHRKQMFM-GLMT-PERVRALAQLFEAEWRRAVPGWTRK------G-EIVFYDELHEPLTRAVCA 147 (415)
T ss_dssp C-SSSGGGCC-HHHHHHHHHHHH-TTCC-HHHHHHHHHHHHHHHHHHHHHHHHH------S-EEEHHHHHHHHHHHHHHH
T ss_pred C-CcceeecC-cHHHHHHHHHHH-HhcC-HHHHHHHHHHHHHHHHHHHHhhccC------C-cEeHHHHHHHHHHHHHHH
Confidence 2 23566655 999999999999 9999 9999999999999999999999763 3 799999999999999999
Q ss_pred HHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 045977 196 MIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIK 275 (311)
Q Consensus 196 ~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~ 275 (311)
+ ||.+++.. +...+.+.+..+..... + + .+..++..++.+++.+++.++|+++++...
T Consensus 148 ~-~G~~~~~~-----~~~~~~~~~~~~~~~~~---------~---~--~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~-- 205 (415)
T 3awm_A 148 W-AGVPLPDD-----EAGNRAGELRALFDAAG---------S---A--SPRHLWSRLARRRVDAWAKRIIEGIRAGSI-- 205 (415)
T ss_dssp H-HTCCCCGG-----GHHHHHHHHHHHHHSTT---------C---S--SHHHHHHHHHHHHHHHHHHHHHHHHHHTSS--
T ss_pred H-cCCCCCcc-----hHHHHHHHHHHHHHHhc---------c---c--CchHHHHHHHHHHHHHHHHHHHHHHHHhhh--
Confidence 8 89988641 22333333333322111 0 0 123355677888999999999999987643
Q ss_pred CCCCCCCCHHHHHHHhccccCCccccCHhhhhhh
Q 045977 276 DQENDDGDLMGILLETCRDENSEVTLTRNQIKYF 309 (311)
Q Consensus 276 ~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~ 309 (311)
....+|+++.|++...+++ ..++++++...
T Consensus 206 --~~~~~d~l~~ll~~~~~~g--~~~~~~~~~~~ 235 (415)
T 3awm_A 206 --GSGSGTAAYAIAWHRDRHD--DLLSPHVAAVE 235 (415)
T ss_dssp --CCCTTSHHHHHHHCBCTTS--CBCCHHHHHHH
T ss_pred --cCCCCCHHHHHHhhhhccC--CCCCHHHHHHH
Confidence 2345799999998743332 45888866544
No 24
>1izo_A P450bsbeta, cytochrome P450 152A1; heme protein, protein-fatty acid complex, riken structural genomics/proteomics initiative, RSGI; HET: HEM PAM; 2.10A {Bacillus subtilis} SCOP: a.104.1.1 PDB: 2zqj_A* 2zqx_A*
Probab=99.93 E-value=7.9e-25 Score=184.94 Aligned_cols=226 Identities=15% Similarity=0.088 Sum_probs=166.1
Q ss_pred CCeeccccccCCChhHHHHHHHHHhC-CceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCC--cccccccCCCce
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYG-PLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPC--PSKYNIYDGSGF 121 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~l 121 (311)
.|++||+..+..+++.++.+++++|| |||++++++.++|++++|++++.++ +. ..|.+.+... ....+.+. .++
T Consensus 8 ~P~lG~~~~~~~~p~~~~~~l~~~yg~pv~~~~~~g~~~v~v~~~~~~~~l~-~~-~~~~~~~~~~~~~~~~~~g~-~~l 84 (417)
T 1izo_A 8 DKSLDNSLTLLKEGYLFIKNRTERYNSDLFQARLLGKNFICMTGAEAAKVFY-DT-DRFQRQNALPKRVQKSLFGV-NAI 84 (417)
T ss_dssp CCCTTHHHHHHHHGGGHHHHHHHHTTSSEEEEEETTEEEEEECSHHHHHHHT-CT-TTEECTTCSCHHHHTTTTCT-TCG
T ss_pred CCccchHHHHhhCcHHHHHHHHHHhCCCeEEeecCCccEEEECCHHHHHHHh-cc-cccccccccccchhhhhccc-cce
Confidence 48999999887789999999999998 8999999899999999999998554 33 3354443222 11222222 366
Q ss_pred EeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHHHHHHHhccc
Q 045977 122 VTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFRMIMNKK 201 (311)
Q Consensus 122 ~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~ 201 (311)
++.+ |+.|+++|++++ ++|+ +..++.+.+.+.+.++++++.|.. ++++|+.+.+..+++++++.+ ||.+
T Consensus 85 ~~~d-g~~h~~~R~~~~-~~f~-~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~dl~~~~~~~~~~vi~~~-~G~~ 153 (417)
T 1izo_A 85 QGMD-GSAHIHRKMLFL-SLMT-PPHQKRLAELMTEEWKAAVTRWEK-------ADEVVLFEEAKEILCRVACYW-AGVP 153 (417)
T ss_dssp GGCC-HHHHHHHHHHHH-HTSS-HHHHHHHHHHHHHHHHHHHHHHTT-------SSEEEHHHHHHHHHHHHHHHH-HTCC
T ss_pred eecC-ChHHHHHHHHhh-hhcC-HHHHHHHHHHHHHHHHHHHHHHhc-------CCCeeHHHHHHHHHHHHHHHH-cCCC
Confidence 6655 999999999999 9999 999999999999999999999865 447999999999999999998 6998
Q ss_pred cCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045977 202 RISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDD 281 (311)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 281 (311)
++.. +..++.+.+..+...... . .+..++..++.+.+.+++.++|++++++.. ....
T Consensus 154 ~~~~-----~~~~~~~~~~~~~~~~~~-----~---------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~----~~~~ 210 (417)
T 1izo_A 154 LKET-----EVKERADDFIDMVDAFGA-----V---------GPRHWKGRRARPRAEEWIEVMIEDARAGLL----KTTS 210 (417)
T ss_dssp CCTT-----THHHHHHHHHHHHHHTTC-----C---------SHHHHHHHHHHHHHHHHHHHHHHHHHTTSS----CCCT
T ss_pred CCch-----HHHHHHHHHHHHHhhccc-----C---------CccchhHHHHHHHHHHHHHHHHHHHHhhcc----CCCc
Confidence 8642 233444444333332210 0 122345667788899999999999987643 2345
Q ss_pred CCHHHHHHHhccccCCccccCHhhhhhh
Q 045977 282 GDLMGILLETCRDENSEVTLTRNQIKYF 309 (311)
Q Consensus 282 ~dll~~ll~~~~~~~~~~~l~~~ei~~~ 309 (311)
+|+++.|++....++ ..++++++...
T Consensus 211 ~d~l~~ll~~~~~~g--~~l~~~~~~~~ 236 (417)
T 1izo_A 211 GTALHEMAFHTQEDG--SQLDSRMAAIE 236 (417)
T ss_dssp TSHHHHHHHCBCTTS--CBCCHHHHHHH
T ss_pred CCHHHHHHHhccccC--CCCCHHHHHHH
Confidence 799999998743322 45888766543
No 25
>3mdm_A Cholesterol 24-hydroxylase; CYP46A1, P450 46A1, thioperamide, monooxygenase, metab enzyme, oxidoreductase, heme, cholesterol metabolism; HET: HEM FJZ; 1.60A {Homo sapiens} PDB: 2q9g_A* 2q9f_A* 3mdr_A* 3mdt_A* 3mdv_A* 4enh_A* 4fia_A*
Probab=99.93 E-value=6.4e-25 Score=187.82 Aligned_cols=235 Identities=11% Similarity=0.141 Sum_probs=167.7
Q ss_pred CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCC-cccccc---cCCCceEeccCChhH
Q 045977 55 SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPC-PSKYNI---YDGSGFVTGPYGAYW 130 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~~~~~---~~~~~l~~~~~g~~w 130 (311)
++.++..+.+|+++|||||++++++.++|+|+||+++++|+.++ .|.+++... ...... ..+.|+++..+|+.|
T Consensus 9 g~~~~~~~~~~~~kyG~v~~~~~~~~~~vvv~~p~~~~~il~~~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~w 86 (456)
T 3mdm_A 9 GRVLQDVFLDWAKKYGPVVRVNVFHKTSVIVTSPESVKKFLMST--KYNKDSKMYRALQTVFGERLFGQGLVSECNYERW 86 (456)
T ss_dssp CCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCHHHHHHHHTCT--TSCCCHHHHHHHHEETTEESSTTSTTTCCCHHHH
T ss_pred cchHHHHHHHHHHHhCCeEEEEeCCCCEEEECCHHHHHHHHhhc--cccccchhHHHHHHhhcccccCCCcccCCChHHH
Confidence 45688999999999999999999999999999999999999643 344443211 011111 113477776569999
Q ss_pred HHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHHHHHHHhccccCccccchH
Q 045977 131 RFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFRMIMNKKRISENEIEN 210 (311)
Q Consensus 131 ~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~ 210 (311)
+++|++++ ++|+ +++++.+.+.+.++++.+++.+... .++ +.++|+.+.+..+++|+++.++||.+++....
T Consensus 87 ~~~Rr~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~--~~~-~~~vd~~~~~~~~~~dvi~~~~fG~~~~~~~~--- 158 (456)
T 3mdm_A 87 HKQRRVID-LAFS-RSSLVSLMETFNEKAEQLVEILEAK--ADG-QTPVSMQDMLTYTAMDILAKAAFGMETSMLLG--- 158 (456)
T ss_dssp HHHHHHHG-GGGS-HHHHHTTHHHHHHHHHHHHHHHHHT--CSS-SSCEEHHHHHHHHHHHHHHHHHHSCCCCGGGT---
T ss_pred HHHHhhcc-cccC-HHHHHHHHHHHHHHHHHHHHHHHHh--cCC-CCeeeHHHHHHHHHHHHHHHHHcCCChhhhcc---
Confidence 99999999 9999 9999999999999999999999876 444 66899999999999999999999999986321
Q ss_pred HHHHHHHHHHHHHHHhcccCcchhhcccccccc-cchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 045977 211 EAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDL-HGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILL 289 (311)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~-~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll 289 (311)
....+...+..+...+.. ...|++.++|. ....+....+.+.+.+++.++++++++..+.+ ...+.|+++.++
T Consensus 159 ~~~~~~~~~~~~~~~~~~----~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~~~~--~~~~~d~l~~ll 232 (456)
T 3mdm_A 159 AQKPLSQAVKLMLEGITA----SRNTLAKFLPGKRKQLREVRESIRFLRQVGRDWVQRRREALKRG--EEVPADILTQIL 232 (456)
T ss_dssp CCHHHHHHHHHHHHHHHH----HHHSCGGGCGGGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCCCCHHHHHH
T ss_pred cccHHHHHHHHHHHHHHH----HHHHHHHhCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcc--ccchhhHHHHHH
Confidence 112333333333332221 11233344321 11234455677788888999999888764311 234579999999
Q ss_pred HhccccCCccccCHhhhhhhc
Q 045977 290 ETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 290 ~~~~~~~~~~~l~~~ei~~~i 310 (311)
++. + ..++++++.+++
T Consensus 233 ~~~-~----~~~~~~~l~~~~ 248 (456)
T 3mdm_A 233 KAE-E----GAQDDEGLLDNF 248 (456)
T ss_dssp HHT-S----SCSSSHHHHHHH
T ss_pred Hhc-C----CCCCHHHHHHHH
Confidence 874 2 237888887654
No 26
>3v8d_A Cholesterol 7-alpha-monooxygenase; cytochrome, oxidoreductase; HET: HEM 0GV; 1.90A {Homo sapiens} PDB: 3sn5_A* 3dax_A*
Probab=99.93 E-value=2.6e-26 Score=198.21 Aligned_cols=248 Identities=9% Similarity=0.073 Sum_probs=176.1
Q ss_pred CCCCCCCCCCCC-CCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCc-ccCCCCCCCc
Q 045977 33 TKSYNFPPSPPA-LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDL-DFASRYEPCP 110 (311)
Q Consensus 33 ~~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~-~~~~~~~~~~ 110 (311)
++..+.||||++ +|++||++.+..+++.++.+++++|||||++++++.++|+|++|+++++++.++.. .+..++. ..
T Consensus 9 ~~~~~~PPgp~~~lPliG~~~~~~~~p~~~~~~l~~~yGpv~~~~lg~~~~vvv~~p~~v~~vl~~~~~~~~~~~~~-~~ 87 (491)
T 3v8d_A 9 RRQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHF-AL 87 (491)
T ss_dssp CCCTTSCCEEEEEESSTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHSCCTTEESSHHHH-HH
T ss_pred ccCCCCCCCCCCCcceeccHHHHhcCHHHHHHHHHHHcCCceEEEECCEEEEEEcCHHHHHHHHhcCCccchHHHHH-HH
Confidence 355678999998 79999999999999999999999999999999999999999999999999975542 2222111 11
Q ss_pred ccccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhcccc---CCCCCccchHHHHH
Q 045977 111 SKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSE---EGGPPCNLGTEVTN 187 (311)
Q Consensus 111 ~~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~---~~~~~~d~~~~~~~ 187 (311)
.....+. +.+...+|+.|+++|+.+. ++|+ +..++.+.+.+.+++..+++.+... .. . ...+++.+.+..
T Consensus 88 ~~~~~g~--~~~~~~~g~~~~~~Rr~~~-~~f~-~~~l~~~~~~i~~~~~~ll~~~~~~--~~~~~~-~~~~~l~~~~~~ 160 (491)
T 3v8d_A 88 SAKAFGH--RSIDPMDGNTTENINDTFI-KTLQ-GHALNSLTESMMENLQRIMRPPVSS--NSKTAA-WVTEGMYSFCYR 160 (491)
T ss_dssp HHHHHTC--CCCCGGGSSBCCCHHHHHH-HHHS-HHHHHHHHHHHHHHHHHHHSCCSSC--GGGGCS-CEEEEHHHHHHH
T ss_pred HHHhcCC--cccccccchhHHHHHHHHH-HHcC-ccchHHHHHHHHHHHHHHHHhhhhc--ccCCCC-CcccCHHHHHHH
Confidence 1222222 3333334999999999998 9999 9999999999999999999865322 11 1 346799999999
Q ss_pred HHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhccccc-ccccchhhHHHHHHHHHHHHHHHHHH
Q 045977 188 MTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTK-MDLHGIGKKLRDVFWRYDELLEKMMT 266 (311)
Q Consensus 188 ~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~~~~~~~~~i~ 266 (311)
+++++++.++||.+++.. ......+.+.++.+... ...+|.+.+ ++ ....++..++.+++.+++.+.++
T Consensus 161 ~~~~~~~~~~fG~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~~l~~~~p-~~~~~~~~~a~~~l~~~~~~~~~ 230 (491)
T 3v8d_A 161 VMFEAGYLTIFGRDLTRR---DTQKAHILNNLDNFKQF------DKVFPALVAGLP-IHMFRTAHNAREKLAESLRHENL 230 (491)
T ss_dssp HHHHHHHHHHHCBCCSCG---GGHHHHHHHHHHHHHHH------HHHHHHHHTTCC-GGGCHHHHHHHHHHHHHTSHHHH
T ss_pred HHHHHHHHHHcCcccccc---chhhhhhHHHHHHHHHH------HHHHHHHHhcCC-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 999999999999998742 22333344444433322 223443222 22 23456777777777777766655
Q ss_pred HHHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 267 DYEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 267 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
+++ +...|+++.++....++ ..++++|+..++
T Consensus 231 ~~~---------~~~~d~l~~l~~~~~~~---~~~~~~ei~~~~ 262 (491)
T 3v8d_A 231 QKR---------ESISELISLRMFLNDTL---STFDDLEKAKTH 262 (491)
T ss_dssp TTC---------BSCCHHHHHHHHHHHHH---BCCCHHHHHHHH
T ss_pred hcc---------ccccHHHHHHHHHhhcc---CCCchHHHHHHH
Confidence 443 23478999998774433 248898887654
No 27
>1jfb_A Nitric-oxide reductase cytochrome P450 55A1; cytochrome P450NOR, atomic resolutio structural genomics/proteomics initiative, RSGI; HET: HEM; 1.00A {Fusarium oxysporum} SCOP: a.104.1.1 PDB: 1jfc_A* 1gej_A* 1ged_A* 1ehe_A* 1gei_A* 1rom_A* 2rom_A* 1ehf_A* 1cl6_A* 1ehg_A* 1cmj_A* 1f25_A* 1f24_A* 1xqd_A* 1f26_A* 1cmn_A* 1ulw_A*
Probab=99.92 E-value=7.9e-24 Score=178.11 Aligned_cols=227 Identities=11% Similarity=0.097 Sum_probs=162.8
Q ss_pred CCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec-CeeEEEEcCHHHHHHHHHhCC-cccCCCCCCCcccc--
Q 045977 38 FPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-PSTYVVVSNATVAKEIFTTHD-LDFASRYEPCPSKY-- 113 (311)
Q Consensus 38 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~v~v~~p~~i~~i~~~~~-~~~~~~~~~~~~~~-- 113 (311)
.||||+++|++|++.. +|+..+.+++ +||||+++.++ |...++|++++.+++++.++. ..+..++.......
T Consensus 2 ~pPGp~~~P~~g~~~~---~p~~~~~~l~-~~Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~~~~~~~~r~~~~~~~~~~ 77 (404)
T 1jfb_A 2 MASGAPSFPFSRASGP---EPPAEFAKLR-ATNPVSQVKLFDGSLAWLVTKHKDVCFVATSEKLSKVRTRQGFPELSASG 77 (404)
T ss_dssp ----CCBSSCCCSSTT---SCCTHHHHHH-HHCSEEEEECTTSCEEEEECSHHHHHHHHHCTTEECCTTSTTCCCCSHHH
T ss_pred CCCCCCCCCCCCCcCC---CccHHHHHHH-HhCCeeeeecCCCCceEEEecHHHHHHHHcCCcccccccccCCccccccc
Confidence 4899999999999864 7888999985 69999999874 567778999999999998763 22333333222111
Q ss_pred --cccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHH
Q 045977 114 --NIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNN 191 (311)
Q Consensus 114 --~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~ 191 (311)
...++.++++.+ |+.|+++|++++ ++|+ +.+++.+.+.+.++++++++.|... ... ++++|+.+.+...+.+
T Consensus 78 ~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~--~~~-~~~~d~~~~~~~~~~~ 151 (404)
T 1jfb_A 78 KQAAKAKPTFVDMD-PPEHMHQRSMVE-PTFT-PEAVKNLQPYIQRTVDDLLEQMKQK--GCA-NGPVDLVKEFALPVPS 151 (404)
T ss_dssp HHHTTSCCCGGGCC-TTHHHHHHTTTG-GGGS-HHHHHHHHHHHHHHHHHHHHHHHHH--CST-TSCEEHHHHTTTHHHH
T ss_pred cchhcccCcccccC-chhHHHHHHHhh-hhcC-HHHHHHHHHHHHHHHHHHHHHHHhc--CCC-CCCccHHHHHHHHHHH
Confidence 112223666665 999999999999 9999 9999999999999999999999876 333 4679999999999999
Q ss_pred HHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhh
Q 045977 192 LIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDD 271 (311)
Q Consensus 192 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~ 271 (311)
+++..+||.+++. . + +....... +. .+ .+..++..++.+.+.+++.++|++++++
T Consensus 152 ~i~~~~~G~~~~~----~---~-~~~~~~~~---~~--------~~------~~~~~~~~~~~~~~~~~~~~~i~~r~~~ 206 (404)
T 1jfb_A 152 YIIYTLLGVPFND----L---E-YLTQQNAI---RT--------NG------SSTAREASAANQELLDYLAILVEQRLVE 206 (404)
T ss_dssp HHHHHHHTCCGGG----H---H-HHHHHHHH---HH--------CT------TSCHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred HHHHHHcCCCHHH----H---H-HHHHHHHH---Hh--------cc------CcchHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 9999999988753 1 1 11111111 10 00 1123556677888999999999988864
Q ss_pred cCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 272 NGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 272 ~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
. .+|+++.|+++..++ ..++++|+.+++
T Consensus 207 ~--------~~d~l~~ll~~~~~~---~~l~~~ei~~~~ 234 (404)
T 1jfb_A 207 P--------KDDIISKLCTEQVKP---GNIDKSDAVQIA 234 (404)
T ss_dssp C--------CSSHHHHHHHHTTTT---TSSCHHHHHHHH
T ss_pred C--------CCcHHHHHHHhhccC---CCCCHHHHHHHH
Confidence 2 369999999764322 348999988765
No 28
>1ued_A P450 OXYC, P450 monooxygenase; cytochrome P450 vancomycin biosynthesis, oxidoreductase; HET: HEM PG4; 1.90A {Amycolatopsis orientalis} SCOP: a.104.1.1
Probab=99.92 E-value=6.1e-24 Score=178.69 Aligned_cols=221 Identities=16% Similarity=0.169 Sum_probs=163.7
Q ss_pred CCCCCCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEe----e-cC-eeEEEEcCHHHHHHHH-HhCCcccCCCC
Q 045977 34 KSYNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIR----I-GP-STYVVVSNATVAKEIF-TTHDLDFASRY 106 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~----~-~~-~~~v~v~~p~~i~~i~-~~~~~~~~~~~ 106 (311)
...+.||||+++|+. +..+++..+.++ ++|||||+++ + ++ .++|+|++|+++++|+ .++. |.+++
T Consensus 7 ~~~~lppgp~~~p~~-----~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~~~~~~vvv~~~~~i~~vl~~~~~--~~~~~ 78 (406)
T 1ued_A 7 QVAPLLREPANFQLR-----TNCDPHEDNFGL-RAHGPLVRIVGESSTQLGRDFVWQAHGYEVVRRILGDHEH--FTTRP 78 (406)
T ss_dssp SCCCEEECCTTTTCE-----ETTEECHHHHHH-HTTCSEEEEESHHHHHTTSSCEEEECSHHHHHHHHHCCSS--EECCC
T ss_pred CCCCCcccCcccCCC-----CCCCcHHHHHHH-HHhCCeeeecccccCCCCCccEEEEcCHHHHHHHHhhCcc--ccccc
Confidence 346789999999977 457889999999 9999999999 6 78 8999999999999999 5442 55544
Q ss_pred CCCccc-ccc---cCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccch
Q 045977 107 EPCPSK-YNI---YDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLG 182 (311)
Q Consensus 107 ~~~~~~-~~~---~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~ 182 (311)
...... .+. ..+.++++. +|+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... |+++|+.
T Consensus 79 ~~~~~~~~~~~~~~~~~~l~~~-~g~~~~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------g~~~d~~ 149 (406)
T 1ued_A 79 QFTQSKSGAHVEAQFVGQISTY-DPPEHTRLRKMLT-PEFT-VRRIRRMEPAIQSLIDDRLDLLEAE------GPSADLQ 149 (406)
T ss_dssp CC---------CGGGTTCGGGC-CTTHHHHHHHHHG-GGSS-HHHHHHHHHHHHHHHHHHHHHHHHH------CTTEEHH
T ss_pred cccccccccccccccccccccC-CCHHHHHHHHHhh-hhhC-HHHHHHHHHHHHHHHHHHHHHHHhc------CCCeeHH
Confidence 311110 111 012366666 4999999999999 9999 9999999999999999999999865 6689999
Q ss_pred HHHHH-HHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHH
Q 045977 183 TEVTN-MTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELL 261 (311)
Q Consensus 183 ~~~~~-~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~ 261 (311)
+.+.. +++++++. +||.+.+ +.+.+......+... ....++..++.+++.+++
T Consensus 150 ~~~~~~~~~~vi~~-~~G~~~~-------~~~~~~~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~ 203 (406)
T 1ued_A 150 GLFADPVGAHALCE-LLGIPRD-------DQREFVRRIRRNADL------------------SRGLKARAADSAAFNRYL 203 (406)
T ss_dssp HHTHHHHHHHHHHH-HHTCCHH-------HHHHHHHHHHHCC---------------------CCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhHHHHHHH-HcCCCHH-------HHHHHHHHHHHHHhc------------------cCCHHHHHHHHHHHHHHH
Confidence 98875 99999995 6998753 223344333222110 001245667788899999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 262 EKMMTDYEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 262 ~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.++|++++++. ..|+++.|++.. + ..++++|+.+++
T Consensus 204 ~~~i~~r~~~~--------~~d~l~~ll~~~-~----~~ls~~ei~~~~ 239 (406)
T 1ued_A 204 DNLLARQRADP--------DDGLLGMIVRDH-G----DNVTDEELKGLC 239 (406)
T ss_dssp HHHHHHHHHSC--------CSSHHHHHHHHH-G----GGSCHHHHHHHH
T ss_pred HHHHHHHHhCC--------CCCHHHHHHHhc-C----CCCCHHHHHHHH
Confidence 99999988641 269999999874 2 348999988765
No 29
>2zbx_A Cytochrome P450-SU1; beta prism, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.50A {Streptomyces griseolus} PDB: 2zby_A* 2zbz_A* 3cv8_A* 3cv9_A*
Probab=99.91 E-value=5.1e-23 Score=173.39 Aligned_cols=225 Identities=13% Similarity=0.205 Sum_probs=163.9
Q ss_pred CCCCCCCCCCCeeccccccCCChhHHHHHHHHHh-CCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccc
Q 045977 36 YNFPPSPPALPIIGHSYLLSSKLPESLQTLARRY-GPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKY 113 (311)
Q Consensus 36 ~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~y-G~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~ 113 (311)
...||+|+++|.+.....+..+++..+.++ ++| ||||++++ ++.++|+|++|+++++|+.++. +++++.......
T Consensus 4 ~~~~~~~~~~P~~~~~~~~~~~p~~~~~~l-~~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~ 80 (412)
T 2zbx_A 4 TATTPQTTDAPAFPSNRSCPYQLPDGYAQL-RDTPGPLHRVTLYDGRQAWVVTKHEAARKLLGDPR--LSSNRTDDNFPA 80 (412)
T ss_dssp ----CCCCSSCBSSCCCSSTTSCCHHHHHH-HHSSSSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EECCTTSTTSCC
T ss_pred CCCCCCCCCCCCCCCCchhccChHHHHHHH-HhcCCCeEeeccCCCCcEEEEecHHHHHHHHcCcc--cccCcccccccc
Confidence 356778888886633344567899999999 888 99999997 8889999999999999998653 444432111111
Q ss_pred c-------ccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHH
Q 045977 114 N-------IYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVT 186 (311)
Q Consensus 114 ~-------~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~ 186 (311)
. ...+.++++. +|+.|+++|++++ ++|+ +..++.+.+.+.++++.+++.|... |+++|+.+.+.
T Consensus 81 ~~~~~~~~~~~~~~l~~~-~g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------g~~~d~~~~~~ 151 (412)
T 2zbx_A 81 TSPRFEAVRESPQAFIGL-DPPEHGTRRRMTI-SEFT-VKRIKGMRPEVEEVVHGFLDEMLAA------GPTADLVSQFA 151 (412)
T ss_dssp CSGGGC----CCCCGGGC-CTTHHHHHHTTTG-GGGS-HHHHHHHHHHHHHHHHHHHHHHHHH------CSCEEHHHHTT
T ss_pred cccccccccccccccccC-CcHHHHHHHHHhh-hhcC-HHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHH
Confidence 1 0012366665 4999999999999 9999 9999999999999999999999875 66899998886
Q ss_pred H-HHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHH
Q 045977 187 N-MTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMM 265 (311)
Q Consensus 187 ~-~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i 265 (311)
. +++++++. +||.+.+. .+.+......+... + .+ ++..++.+.+.+++.++|
T Consensus 152 ~~~~~~vi~~-~~G~~~~~-------~~~~~~~~~~~~~~----------~-------~~--~~~~~~~~~~~~~~~~~i 204 (412)
T 2zbx_A 152 LPVPSMVICR-LLGVPYAD-------HEFFQDASKRLVQS----------T-------DA--QSALTARNDLAGYLDGLI 204 (412)
T ss_dssp THHHHHHHHH-HHTCCGGG-------HHHHHHHHHHHHHC----------S-------SH--HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-HcCCCHHH-------HHHHHHHHHHHhcc----------C-------cH--HHHHHHHHHHHHHHHHHH
Confidence 4 99999997 69998752 22344443333220 0 11 556677888999999999
Q ss_pred HHHHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 266 TDYEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 266 ~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
++++++. .+|+++.|++...+ +..++++|+.+++
T Consensus 205 ~~r~~~~--------~~d~l~~ll~~~~~---~~~ls~~ei~~~~ 238 (412)
T 2zbx_A 205 TQFQTEP--------GAGLVGALVADQLA---NGEIDREELISTA 238 (412)
T ss_dssp HHHHHSC--------CSSHHHHHHHTTTT---TTSSCHHHHHHHH
T ss_pred HHHHhCC--------CCCHHHHHHHhccc---CCCCCHHHHHHHH
Confidence 9988641 26999999987532 2359999988765
No 30
>1cpt_A Cytochrome P450-TERP; oxidoreductase(oxygenase); HET: HEM; 2.30A {Pseudomonas SP} SCOP: a.104.1.1
Probab=99.90 E-value=1.2e-23 Score=178.09 Aligned_cols=239 Identities=11% Similarity=0.121 Sum_probs=165.7
Q ss_pred CCCCCCCCCCCCCeeccccccC-----CChhHHHHHHHHHhCCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccCCCCC
Q 045977 34 KSYNFPPSPPALPIIGHSYLLS-----SKLPESLQTLARRYGPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFASRYE 107 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~-----~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~ 107 (311)
.+++.||| ++|++.... .+++..+.++++ ||||++++. |+.++|+|++++.+++++.+. ..|++++.
T Consensus 3 ~~~~~pp~-----~~g~l~~~~~~~~~~~p~~~~~~l~~-~gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~-~~fs~r~~ 75 (428)
T 1cpt_A 3 ARATIPEH-----IARTVILPQGYADDEVIYPAFKWLRD-EQPLAMAHIEGYDPMWIATKHADVMQIGKQP-GLFSNAEG 75 (428)
T ss_dssp TTCCSCHH-----HHHHHHSSGGGGCHHHHHHHHHHHHH-HCSEEEECCTTSCCEEEECSHHHHHHHHHCT-TTEESSSS
T ss_pred cccccchh-----hhcccCChhhhcccCCccHHHHHHHH-hCCeeeccccCCCCeEEEccHHHHHHHHcCc-hhccCccc
Confidence 34567887 888765542 458888988865 799999998 678999999999999999754 45777664
Q ss_pred -CCcc---c-c-c---cc----CCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccC
Q 045977 108 -PCPS---K-Y-N---IY----DGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEE 174 (311)
Q Consensus 108 -~~~~---~-~-~---~~----~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~ 174 (311)
.... . . + .+ .+.++++.+ |+.|+++|++++ ++|+ +.+++.+.+.+.++++.+++.|...
T Consensus 76 ~~~~~~~~~~~~~~~~~g~~~~~~~~l~~~~-g~~~~~~Rr~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~----- 147 (428)
T 1cpt_A 76 SEILYDQNNEAFMRSISGGCPHVIDSLTSMD-PPTHTAYRGLTL-NWFQ-PASIRKLEENIRRIAQASVQRLLDF----- 147 (428)
T ss_dssp CSSCCCHHHHHHHHHHTTTSSCSSCCGGGCC-TTHHHHHHHHHH-TTSS-HHHHGGGHHHHHHHHHHHHHHHHTS-----
T ss_pred cccCCcccccchhccccccccccccccccCC-hHHHHHHHHHhh-hhhC-HHHHHHHHHHHHHHHHHHHHHHHHh-----
Confidence 2221 1 1 2 21 124666665 999999999999 9999 9999999999999999999999874
Q ss_pred CCCCccchHH-HHHHHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHH
Q 045977 175 GGPPCNLGTE-VTNMTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDV 253 (311)
Q Consensus 175 ~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~ 253 (311)
++.+|+.+. ...+++++|+.+ ||.+.+. .+.+......+..... . ....+|++.+++ ....++..++
T Consensus 148 -~~~~d~~~~~~~~~~~~vi~~~-fG~~~~~-------~~~~~~~~~~~~~~~~-~-~~~~~P~l~~~~-~~~~~~~~~~ 215 (428)
T 1cpt_A 148 -DGECDFMTDCALYYPLHVVMTA-LGVPEDD-------EPLMLKLTQDFFGVHE-P-DEQAVAAPRQSA-DEAARRFHET 215 (428)
T ss_dssp -SSEEEHHHHTTTTHHHHHHHHH-HTCCGGG-------HHHHHHHHHTTTCC-------------------CHHHHHHHH
T ss_pred -CCCeehHHHHHhhhHHHHHHHH-cCCCHhH-------HHHHHHHHHHHHhccc-c-cccccccccccc-hhhHHHHHHH
Confidence 457999855 567999999999 9998763 2233333332221111 0 112345444331 1233567778
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 254 FWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 254 ~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.+.+.+++.+.|++++++ ..+|+++.|++... + +..+|++|+.+++
T Consensus 216 ~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~~-~--~~~ls~~ei~~~~ 261 (428)
T 1cpt_A 216 IATFYDYFNGFTVDRRSC--------PKDDVMSLLANSKL-D--GNYIDDKYINAYY 261 (428)
T ss_dssp HHHHHHHHHHHHHHHTTS--------CCSSHHHHHHHCBS-S--SSBCCHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcC--------CCCcHHHHHHhccc-c--CCCCCHHHHHHHH
Confidence 889999999999988753 23699999998743 2 2459999988765
No 31
>1s1f_A Putative cytochrome P450; cytochrome P450 oxidoreductase, CYP158A2, anti biosynthesis, oxidoreductase; HET: HEM PIM; 1.50A {Streptomyces coelicolor} SCOP: a.104.1.1 PDB: 1se6_A* 2d0e_A* 1t93_A* 2d09_A* 3tzo_A*
Probab=99.90 E-value=2.4e-22 Score=169.01 Aligned_cols=221 Identities=13% Similarity=0.144 Sum_probs=162.7
Q ss_pred CCCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEee-cCee-EEEEcCHHHHHHHHHhCCcccCCCCCCCcc---
Q 045977 37 NFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRI-GPST-YVVVSNATVAKEIFTTHDLDFASRYEPCPS--- 111 (311)
Q Consensus 37 ~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~-~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~--- 111 (311)
+.+|+|+.+|+.++ ...+++.++.++ ++||||+++++ ++.+ +|+|++|+.+++|+.+. .|.+++.....
T Consensus 8 ~~~~~~~~~p~~~~---~~~~p~~~~~~l-~~~Gpv~~~~~~~g~~p~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~ 81 (406)
T 1s1f_A 8 QAVPPVRDWPAVDL---PGSDFDPVLTEL-MREGPVTRISLPNGEGWAWLVTRHDDVRLVTNDP--RFGREAVMDRQVTR 81 (406)
T ss_dssp CCSCCEEECCCCCC---CTTCCCHHHHHH-HHHCSEEEEECSBSBSCEEEECSHHHHHHHHTCT--TEESTTTTTTTBCB
T ss_pred hhccCCCCCCCCcc---cccCchHHHHHH-HhcCCeeeeccCCCcccEEEEcCHHHHHHHHcCC--CccCCcCCCCCccc
Confidence 56777777888776 357899999988 57999999996 6666 99999999999999853 47666543211
Q ss_pred -cc-cccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHH
Q 045977 112 -KY-NIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNM 188 (311)
Q Consensus 112 -~~-~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~ 188 (311)
.. ..+.+.++++.+ |+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... ++++|+.+.+ ..+
T Consensus 82 ~~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------~~~~d~~~~~~~~~ 152 (406)
T 1s1f_A 82 LAPHFIPARGAVGFLD-PPDHTRLRRSVA-AAFT-ARGVERVRERSRGMLDELVDAMLRA------GPPADLTEAVLSPF 152 (406)
T ss_dssp SSSSCSSCTTSGGGCC-TTHHHHHHHHHH-HHHS-HHHHHHHHHHHHHHHHHHHHHHHHH------CSSEEHHHHTTTHH
T ss_pred ccccccccccccccCC-chHHHHHHHHHH-HhhC-HHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHhhHh
Confidence 11 222235777765 999999999999 9999 9999999999999999999999854 5589998666 579
Q ss_pred HHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHH
Q 045977 189 TNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDY 268 (311)
Q Consensus 189 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 268 (311)
++++++. +||.+++. .+.+......+..... | .++..++.+.+.+++.++|+++
T Consensus 153 ~~~vi~~-~~G~~~~~-------~~~~~~~~~~~~~~~~--------~----------~~~~~~~~~~~~~~~~~~i~~r 206 (406)
T 1s1f_A 153 PIAVICE-LMGVPATD-------RHSMHTWTQLILSSSH--------G----------AEVSERAKNEMNAYFSDLIGLR 206 (406)
T ss_dssp HHHHHHH-HHTCCGGG-------HHHHHHHHHHHHHHHT--------T----------CCCCHHHHTHHHHHHHHHHHTS
T ss_pred HHHHHHH-HhCCCHHH-------HHHHHHHHHHHHhccC--------C----------HHHHHHHHHHHHHHHHHHHHHH
Confidence 9999998 59998763 2234444443332211 1 0234456677888899999877
Q ss_pred HhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 269 EDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 269 ~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
+++ ..+|+++.|++...+ ..++++|+.+++
T Consensus 207 ~~~--------~~~d~l~~ll~~~~~----~~ls~~el~~~~ 236 (406)
T 1s1f_A 207 SDS--------AGEDVTSLLGAAVGR----DEITLSEAVGLA 236 (406)
T ss_dssp CCS--------CCCSHHHHHHHHHHT----TSSCHHHHHHHH
T ss_pred HhC--------CCCCHHHHHHHhhcc----cCCCHHHHHHHH
Confidence 643 236999999987432 349999988764
No 32
>3oo3_A OXY protein; cytochrome P450, monooxygenase, PCD-teicoplanin aglycone, oxidoreductase; HET: HEM; 2.20A {Actinoplanes teichomyceticus} SCOP: a.104.1.0 PDB: 3o1a_A*
Probab=99.89 E-value=8e-22 Score=164.77 Aligned_cols=206 Identities=9% Similarity=0.122 Sum_probs=155.7
Q ss_pred CCChhHHHHHHHHHhCCceEEeecC----eeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccccCCCceEeccCChhH
Q 045977 55 SSKLPESLQTLARRYGPLMQIRIGP----STYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYW 130 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~~~~~~~----~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~w 130 (311)
..+++..+.++ ++||||+++++++ .++|+|++|+++++|+. +...|++++...........+.+++.. +|+.|
T Consensus 11 ~~~p~~~~~~l-r~yGpv~~~~~~~~~~g~~~vvv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~-~g~~~ 87 (384)
T 3oo3_A 11 RLDPVPEFEEL-QKAGPLHEYDTEPGMDGRKQWLVTGHDEVRAILA-DHERFSSMRPVDDEADRALLPGILQAY-DPPDH 87 (384)
T ss_dssp TTEECHHHHHH-HHTCSEECCCCC------CEEEECCHHHHHHHHH-CTTTEECSCCCC-----CCCTTCGGGC-CTTHH
T ss_pred ccChhHHHHHH-HhcCCeeecccccccCCCCEEEEcCHHHHHHHHh-CchhccCCccccccccccccccccccC-CChhH
Confidence 57899999999 5999999999876 89999999999999995 445687776544222212222344444 59999
Q ss_pred HHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHHHHHHHhccccCccccchH
Q 045977 131 RFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFRMIMNKKRISENEIEN 210 (311)
Q Consensus 131 ~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~ 210 (311)
+++|++++ ++|+ +.+++.+.+.+.+.++++++.|... |+++|+.+.+...+.+++...+||.+.+.
T Consensus 88 ~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------~~~~d~~~~~~~~~~~~v~~~~~G~~~~~------ 153 (384)
T 3oo3_A 88 TRLRRTVA-PAYS-ARRMERLRPRIEEIVEECLDDFESV------GAPVDFVRHAAWPIPAYIACEFLGVPRDD------ 153 (384)
T ss_dssp HHHHHHHG-GGGC-HHHHHHHHHHHHHHHHHHHHHHHHS------CSSEEHHHHTTTHHHHHHHHHHHTCCGGG------
T ss_pred HHHHHHHH-HhhC-HHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHHHHHHHHHHcCCCHHH------
Confidence 99999999 9999 9999999999999999999999875 66899999999988777777789988763
Q ss_pred HHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 045977 211 EAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLE 290 (311)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~ 290 (311)
.+.+.+.+..+.. .+..++..++.+++.+++.+.|++++++ ..+|+++.|++
T Consensus 154 -~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~~i~~~~~~--------~~~d~l~~ll~ 205 (384)
T 3oo3_A 154 -QAELSRMIRESRE-------------------SRLPRQRTLSGLGIVNYTKRLTSGKRRD--------PGDGMIGVIVR 205 (384)
T ss_dssp -HHHHHHHHHHHHH-------------------CSCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHH
T ss_pred -HHHHHHHHHHHhc-------------------cCChHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHH
Confidence 2334444444332 0123566677888999999999988753 23699999998
Q ss_pred hccccCCccccCHhhhhhhc
Q 045977 291 TCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 291 ~~~~~~~~~~l~~~ei~~~i 310 (311)
. .+ ..++++++.+++
T Consensus 206 ~-~~----~~l~~~~l~~~~ 220 (384)
T 3oo3_A 206 E-HG----AEISDEELAGLA 220 (384)
T ss_dssp H-HG----GGSCHHHHHHHH
T ss_pred h-cC----CCCCHHHHHHHH
Confidence 7 22 348999988764
No 33
>3aba_A Cytochrome P450; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding, oxidoreductase-antibiotic complex; HET: HEM FLI; 1.80A {Streptomyces avermitilis} PDB: 3e5j_A* 3e5k_A* 3e5l_A*
Probab=99.88 E-value=2e-21 Score=163.17 Aligned_cols=207 Identities=11% Similarity=0.134 Sum_probs=154.0
Q ss_pred cCCChhHHHHHHHHHhCCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccCCCCC--C-Cc---ccccccCCCceEeccC
Q 045977 54 LSSKLPESLQTLARRYGPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFASRYE--P-CP---SKYNIYDGSGFVTGPY 126 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~--~-~~---~~~~~~~~~~l~~~~~ 126 (311)
+..+++..+.++ ++||||+++++ ++.++|+|++|+++++|+.++ .|++++. + .. ..... .+.++++. +
T Consensus 17 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~-~~~~l~~~-~ 91 (403)
T 3aba_A 17 CPFLPPDGIADI-RAAAPVTRATFTSGHEAWLVTGYEEVRALLRDS--SFSVQVPHALHTQDGVVTQKP-GRGSLLWQ-D 91 (403)
T ss_dssp STTSCCTTHHHH-HHHCSEEEEECTTSCEEEEECCHHHHHHHHHCT--TEESCCSCCTTSSSCCCCCCC-CTTCCTTC-C
T ss_pred cccChhHHHHHH-HhcCCeeeeccCCCceEEEEcCHHHHHHHHcCC--Ccccccccccccccccccccc-cccccccC-C
Confidence 456788899999 89999999997 889999999999999999864 3666532 1 11 11111 23466665 4
Q ss_pred ChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCcc
Q 045977 127 GAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRISE 205 (311)
Q Consensus 127 g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~ 205 (311)
|+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... ++++|+.+.+ ..+++++++. +||.+.+.
T Consensus 92 g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~- 161 (403)
T 3aba_A 92 EPEHTSDRKLLA-KEFT-VRRMQALRPNIQRIVDEHLDAIEAR------GGPVDLVKTFANAVPSMVISD-LFGVPVER- 161 (403)
T ss_dssp TTHHHHHHHHHH-HHSC-HHHHHTTHHHHHHHHHHHHHHHHHH------CSCEEHHHHTTTHHHHHHHHH-HHTCCGGG-
T ss_pred chhHHHHHHHHH-hhcC-HHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHHHHHHHHH-HcCCCHHH-
Confidence 999999999999 9999 9999999999999999999999853 5579998766 5799999998 69998752
Q ss_pred ccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHH
Q 045977 206 NEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLM 285 (311)
Q Consensus 206 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll 285 (311)
.+.+......+.. . .. .+ ++..++.+.+.+++.++|++++++. .+|++
T Consensus 162 ------~~~~~~~~~~~~~----~----~~--------~p--~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll 209 (403)
T 3aba_A 162 ------RAEFQDIAEAMMR----V----DQ--------DA--AATEAAGMRLGGLLYQLVQERRANP--------GDDLI 209 (403)
T ss_dssp ------HHHHHHHHHHHSB----S----SS--------CH--HHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHH
T ss_pred ------HHHHHHHHHHHHh----c----cC--------cH--HHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHH
Confidence 2233333222211 0 00 11 5566778889999999999988642 26999
Q ss_pred HHHHHhccccCCccccCHhhhhhhc
Q 045977 286 GILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 286 ~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
+.|+++.. + +..++++|+.+++
T Consensus 210 ~~ll~~~~-~--~~~l~~~ei~~~~ 231 (403)
T 3aba_A 210 SALITTED-P--DGVVDDMFLMNAA 231 (403)
T ss_dssp HHHHTSCC-T--TCCCSHHHHHHHH
T ss_pred HHHHhhcc-C--CCCCCHHHHHHHH
Confidence 99998743 2 2459999988765
No 34
>3abb_A CYP105D6, cytochrome P450 hydroxylase; oxidoreductase, heme, monooxygenase, macrolide, filipi metal-binding; HET: HEM; 2.30A {Streptomyces avermitilis}
Probab=99.88 E-value=6.4e-22 Score=166.53 Aligned_cols=208 Identities=11% Similarity=0.174 Sum_probs=150.3
Q ss_pred ccCCChhHHHHHHHHHhCCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccc---ccc----CCCceEec
Q 045977 53 LLSSKLPESLQTLARRYGPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKY---NIY----DGSGFVTG 124 (311)
Q Consensus 53 ~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~---~~~----~~~~l~~~ 124 (311)
.+..+++..+.+| ++||||+++++ ++.++|+|++|+++++|+.++. |.+++....... +.. .+.++++.
T Consensus 21 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 97 (408)
T 3abb_A 21 TCPYQPPKAYEER-RGESPLTQVTLFDGRPAWLITGHAEGRALLVDPR--LSSDWGHPDFPVVVRRTEDRGGLAFPLIGV 97 (408)
T ss_dssp SSTTSCCHHHHHH-CCSSSEEEEECTTSCEEEEECCHHHHHHHHTCTT--EECCTTSTTCCCCC---------CCTTTTC
T ss_pred ccccCchHHHHHH-HhcCCeeeeecCCCCcEEEEeCHHHHHHHHcCCC--cccccccccccccccCCccccccccccccC
Confidence 3467899999999 89999999997 7889999999999999998643 444432111110 111 11356665
Q ss_pred cCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHH-HHHHHHHHHHHhccccC
Q 045977 125 PYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVT-NMTNNLIFRMIMNKKRI 203 (311)
Q Consensus 125 ~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~ 203 (311)
+|+.|+++|++++ ++|+ +.+++.+.+.+.++++++++.|... |+++|+.+.+. .+++++++. +||.+.+
T Consensus 98 -~g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------g~~~d~~~~~~~~~~~~vi~~-~~G~~~~ 167 (408)
T 3abb_A 98 -DDPVHARQRRMLI-PSFG-VKRMNAIRPRLQSLVDRLLDDMLAK------GPGADLVSAFALPVPSVAICE-LLGVPYG 167 (408)
T ss_dssp -CTTHHHHHHHHHG-GGGC-HHHHHHHHHHHHHHHHHHHHHHHHT------CSCEEHHHHTTTHHHHHHHHH-HHTCCGG
T ss_pred -CchHHHHHHHHhh-hhcC-HHHHHHHHHHHHHHHHHHHHHHHhc------CCCeehHHHHHHHHHHHHHHH-HhCCCHH
Confidence 5999999999999 9999 9999999999999999999999864 66899998876 599999997 6999875
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 045977 204 SENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGD 283 (311)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 283 (311)
. .+.+......+... + .+ ++..++.+.+.+++.++|++++++. .+|
T Consensus 168 ~-------~~~~~~~~~~~~~~----------~-------~~--~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d 213 (408)
T 3abb_A 168 D-------HDFFEECSRNFVGA----------A-------TS--AEADAAFGELYTYLHGLVGRKQAEP--------EDG 213 (408)
T ss_dssp G-------HHHHHHHHHHHC-------------------------CCSSHHHHHHHHHHHHHHHHHHSC--------CSS
T ss_pred H-------HHHHHHHHHHHhcc----------c-------ch--HHHHHHHHHHHHHHHHHHHHHHhCC--------CCC
Confidence 2 22333333322210 0 01 2233456678888999999888641 269
Q ss_pred HHHHHHHhccccCCccccCHhhhhhhc
Q 045977 284 LMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 284 ll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
+++.|+++..+ + ..++++|+.+++
T Consensus 214 ~l~~ll~~~~~-~--~~ls~~ei~~~~ 237 (408)
T 3abb_A 214 LLDELIARQLE-E--GDLDHDEVVMIA 237 (408)
T ss_dssp HHHHHHHHHHT-S--SSCCHHHHHHHH
T ss_pred HHHHHHhcccC-C--CCCCHHHHHHHH
Confidence 99999987432 2 359999988765
No 35
>3ivy_A Cytochrome P450 CYP125; cholesterol, monooxygenase, H iron, metal-binding, oxidoreductase; HET: HEM; 1.35A {Mycobacterium tuberculosis} PDB: 3iw0_A* 3iw1_A* 3iw2_A* 2x5w_A* 2x5l_A* 2xc3_A* 2xn8_A*
Probab=99.88 E-value=1.7e-22 Score=171.25 Aligned_cols=230 Identities=12% Similarity=0.113 Sum_probs=159.3
Q ss_pred CCCCCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEe--------ecCeeEEEEcCHHHHHHHHHhCCcccCCCC
Q 045977 35 SYNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIR--------IGPSTYVVVSNATVAKEIFTTHDLDFASRY 106 (311)
Q Consensus 35 ~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~--------~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~ 106 (311)
....||+|.++++++....-..+|+.++.++ ++||||+++. +|+.++++|++++.+++|+.+. ..|++++
T Consensus 16 ~~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-r~~gPv~~~~~~~g~~~~lG~~~~~vv~~~~~v~~vl~~~-~~fs~~~ 93 (433)
T 3ivy_A 16 TVPSPNLPPGFDFTDPAIYAERLPVAEFAEL-RSAAPIWWNGQDPGKGGGFHDGGFWAITKLNDVKEISRHS-DVFSSYE 93 (433)
T ss_dssp ----CCCCTTCCTTCHHHHTTCCCHHHHHHH-HHHCSEEEEECCTTCSTTCCSSEEEEECSHHHHHHHHHCT-TTEESTT
T ss_pred ccCCCCCCCCCCCCCHHHhhcCCccHHHHHH-HhcCCEEecccccccccccCCCCEEEEecHHHHHHHHcCh-hhccCCc
Confidence 3456777777777665443356799999999 8899999998 4557899999999999999754 4576665
Q ss_pred CCCccc--------ccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCC
Q 045977 107 EPCPSK--------YNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPP 178 (311)
Q Consensus 107 ~~~~~~--------~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 178 (311)
...... .....+.++++.+ |+.|+++|++++ ++|+ +..++.+.+.+.+.++++++.|... + .
T Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~------~-~ 163 (433)
T 3ivy_A 94 NGVIPRFKNDIAREDIEVQRFVMLNMD-APHHTRLRKIIS-RGFT-PRAVGRLHDELQERAQKIAAEAAAA------G-S 163 (433)
T ss_dssp TCSCCCCCTTCCHHHHHGGGGSGGGCC-TTHHHHHHHHHG-GGSC-HHHHHTTHHHHHHHHHHHHHHHHHH------C-E
T ss_pred ccccccccccccccccccccCCccccC-hHHHHHHHHHHH-HhhC-HHHHHHHHHHHHHHHHHHHHHHhhC------C-C
Confidence 433221 1122234667665 999999999999 9999 9999999999999999999999863 3 6
Q ss_pred ccchHHH-HHHHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHH
Q 045977 179 CNLGTEV-TNMTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRY 257 (311)
Q Consensus 179 ~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~ 257 (311)
+|+.+.+ ..+++++++.+ ||.+.+ +...+.+....+. ....|... ..+..++.+++
T Consensus 164 ~d~~~~~~~~~~~~vi~~l-~G~~~~-------~~~~~~~~~~~~~--------~~~~p~~~-------~~~~~~~~~~~ 220 (433)
T 3ivy_A 164 GDFVEQVSCELPLQAIAGL-LGVPQE-------DRGKLFHWSNEMT--------GNEDPEYA-------HIDPKASSAEL 220 (433)
T ss_dssp EEHHHHTTSHHHHHHHHHH-HTCCHH-------HHHHHHHHHTTCS--------CCCCGGGT-------TCCHHHHHHHH
T ss_pred eeHHHHHHHHHHHHHHHHH-cCCCHH-------HHHHHHHHHHHHh--------ccCCchhh-------hHHHHHHHHHH
Confidence 8998887 99999999996 896543 3333333221111 11122111 12456677889
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 258 DELLEKMMTDYEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 258 ~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.+++.++|++++++ ..+|+++.|++...++ ..++++|+..++
T Consensus 221 ~~~~~~~i~~r~~~--------~~~dll~~ll~~~~~~---~~ls~~ei~~~~ 262 (433)
T 3ivy_A 221 IGYAMKMAEEKAKN--------PADDIVTQLIQADIDG---EKLSDDEFGFFV 262 (433)
T ss_dssp HHHHHHHHHHC---------------CHHHHHSCC--C---CCCCHHHHHHHH
T ss_pred HHHHHHHHHHHhcC--------CCCcHHHHHHhhhcCC---CCCCHHHHHHHH
Confidence 99999999988754 2369999999874422 359999998765
No 36
>2jjn_A Cytochrome P450 113A1; oxidoreductase, iron, heme, monooxygenase, metal-binding, AN biosynthesis, TIE-ROD mechanism of action; HET: HEM; 1.59A {Saccharopolyspora erythraea} PDB: 2jjo_A* 2jjp_A* 2xfh_A* 2wio_A* 2vrv_A*
Probab=99.88 E-value=2.6e-22 Score=169.11 Aligned_cols=225 Identities=12% Similarity=0.125 Sum_probs=156.9
Q ss_pred HHhhcCCCCCCCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCC
Q 045977 28 LIKTFTKSYNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYE 107 (311)
Q Consensus 28 ~~~~~~~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~ 107 (311)
.|++..++.+.+|||+. ..+++..+.++++ |||| +.++.+.++|++|+.+++++.++ ..|++++.
T Consensus 10 iyr~~~~pl~~~PGp~~----------~~~p~~~~~~l~~-~gpv---~~~~~~~~vv~~~~~v~~vl~~~-~~f~~~~~ 74 (411)
T 2jjn_A 10 CARRTLTTIDEVPGMAD----------ETALLDWLGTMRE-KQPV---WQDRYGVWHVFRHADVQTVLRDT-ATFSSDPT 74 (411)
T ss_dssp -------CCCSCCCSSC----------HHHHHHHHHHHHH-HCSE---EECTTSCEEECSHHHHHHHHHCT-TTEESCGG
T ss_pred hhhcccCCCCCCCCccc----------ccChHHHHHHHHH-hCCc---ccCCCCeEEECCHHHHHHHHcCc-ccccCccc
Confidence 34445578888888872 1468889999965 9998 56667899999999999999865 35777653
Q ss_pred CCcccccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHH-HH
Q 045977 108 PCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTE-VT 186 (311)
Q Consensus 108 ~~~~~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~-~~ 186 (311)
.. .......+.++++.+ |+.|+++|++++ ++|+ +..++.+.+.+.++++++++. . ++++|+.+. ..
T Consensus 75 ~~-~~~~~~~~~~~~~~~-g~~~~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~---~------~~~~d~~~~~~~ 141 (411)
T 2jjn_A 75 RV-IEGASPTPGMIHEID-PPEHRALRKVVS-SAFT-PRTISDLEPRIRDVTRSLLAD---A------GESFDLVDVLAF 141 (411)
T ss_dssp GG-STTCCCCTTCGGGCC-TTHHHHHHHHHH-HHSC-HHHHHTTHHHHHHHHHHHHHT---S------CSEEEHHHHTTT
T ss_pred cc-CCcccccccccccCC-chHHHHHHHHhh-hhcC-HHHHHHHHHHHHHHHHHHHhc---C------CCceeHHHHHHH
Confidence 22 111112234666665 999999999999 9999 999999999999999999988 3 447999854 56
Q ss_pred HHHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHH
Q 045977 187 NMTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMT 266 (311)
Q Consensus 187 ~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 266 (311)
.+++++++.+ ||.+.+.. . .+.+....+..... |. +++ +...++..++.+++.+++.+.|+
T Consensus 142 ~~~~~vi~~~-fG~~~~~~---~----~~~~~~~~~~~~~~--------~~--~~~-p~~~~~~~~~~~~~~~~~~~~i~ 202 (411)
T 2jjn_A 142 PLPVTIVAEL-LGLPPMDH---E----QFGDWSGALVDIQM--------DD--PTD-PALAERIADVLNPLTAYLKARCA 202 (411)
T ss_dssp HHHHHHHHHH-HTCCSCCC---S----TTCCHHHHHHHSCC--------SC--TTC-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-cCCCHHHH---H----HHHHHHHHHHhccC--------cc--ccc-hHHHHHHHHHHHHHHHHHHHHHH
Confidence 8999999998 99987642 1 12222333322111 11 110 12345667788889999999999
Q ss_pred HHHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 267 DYEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 267 ~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
+++++ . .+|+++.|++...+ +..++++|+.+++
T Consensus 203 ~r~~~------~--~~d~l~~ll~~~~~---~~~l~~~el~~~~ 235 (411)
T 2jjn_A 203 ERRAD------P--GDDLISRLVLAEVD---GRALDDEEAANFS 235 (411)
T ss_dssp HHHHS------C--CSSHHHHHHHCCBT---TBCCCHHHHHHHH
T ss_pred HHHhC------C--CCCHHHHHHhcccC---CCCCCHHHHHHHH
Confidence 98863 2 36999999987432 2459999988765
No 37
>3tkt_A Cytochrome P450; aromatic hydrocarbon binding of P450 E oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans}
Probab=99.88 E-value=4.9e-22 Score=169.17 Aligned_cols=219 Identities=10% Similarity=0.122 Sum_probs=156.3
Q ss_pred hhHHHHHHHHHhCCce--EEe-ecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccc----------c---CCCce
Q 045977 58 LPESLQTLARRYGPLM--QIR-IGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNI----------Y---DGSGF 121 (311)
Q Consensus 58 ~~~~~~~~~~~yG~v~--~~~-~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~----------~---~~~~l 121 (311)
|+..+.++ ++||||+ +++ +++.++++|++++.+++++++. ..|++++......... + .+.++
T Consensus 47 p~~~~~~l-r~~gPV~~~~~~~~g~~~~~vvt~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~gg~~~~~~~l 124 (450)
T 3tkt_A 47 LLDRFDAL-RAEAPVAKVVAPDDEHEPFWLVSSFDGVMKASKDN-ATFLNNPKSTVFTLRVGEMMAKAITGGSPHLVESL 124 (450)
T ss_dssp HHHHHHHH-HHHCSEEEECCTTCSSCCEEEECSHHHHHHHHHCT-TTEESSSSCSSCCCHHHHHHHHHHHTSCSCSSCCG
T ss_pred chHHHHHH-HhcCCeecccccCCCCCCEEEEecHHHHHHHHhCc-ccccCCCccccccccccccccccccccccccccCc
Confidence 88888888 7799999 888 6778999999999999999765 5677766433221110 0 12356
Q ss_pred EeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhcc
Q 045977 122 VTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNK 200 (311)
Q Consensus 122 ~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~ 200 (311)
++.+ |+.|+++|++++ ++|+ +.+++.+.+.+.++++++++.+... ++++|+.+.+ ..+++++|+.+ ||.
T Consensus 125 ~~~d-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~------~~~~dl~~~~~~~~~~~vi~~l-~G~ 194 (450)
T 3tkt_A 125 VQMD-APKHPKLRRLTQ-DWFM-PKNLARLDGEIRKIANEAIDRMLGA------GEEGDFMALVAAPYPLHVVMQI-LGV 194 (450)
T ss_dssp GGCC-TTHHHHHHHHHH-TTTS-HHHHGGGHHHHHHHHHHHHHHHHHT------CSEEEHHHHTTTHHHHHHHHHH-TTC
T ss_pred ccCC-CHHHHHHHHHhh-hhhC-HHHHHHHHHHHHHHHHHHHHHHHhc------CCCEeeHHHHHHHHHHHHHHHH-cCC
Confidence 6655 999999999999 9999 9999999999999999999999875 5589998887 69999999996 998
Q ss_pred ccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccc-cccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCC
Q 045977 201 KRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKM-DLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQEN 279 (311)
Q Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 279 (311)
+.+. ...+......+.... .....|++.++ ++.+..++..++.+.+.+++.++|++++++.
T Consensus 195 ~~~~-------~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~r~~~~------- 256 (450)
T 3tkt_A 195 PPED-------EPKMLFLTQQMFGGQ----DEDMNKSGLKDLPPEQISQIVAGAVAEFERYFAGLAAERRRNP------- 256 (450)
T ss_dssp CGGG-------HHHHHHHHHTTSCCC--------------------HHHHHHHHHHHHHHHHHHHHHHHHHSC-------
T ss_pred ChhH-------HHHHHHHHHHHhccc----cchhhccccccccchhHHHHHHHHHHHHHHHHHHHHHHHHhCC-------
Confidence 7652 233444433332111 11222333222 2233456777888899999999999988642
Q ss_pred CCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 280 DDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 280 ~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.+|+++.|++... ++ ..++++|+.+++
T Consensus 257 -~~dll~~ll~~~~-~~--~~ls~~ei~~~~ 283 (450)
T 3tkt_A 257 -TDDVATVIANAVV-DG--EPMSDRDTAGYY 283 (450)
T ss_dssp -CSSHHHHHHTCEE-TT--EECCHHHHHHHH
T ss_pred -CCCHHHHHHhccc-cC--CCCCHHHHHHHH
Confidence 3699999998754 22 459999988765
No 38
>3dax_A Cytochrome P450 7A1; cholesterol, cholesterol 7-alpha hydroxylase, structural genomics, structural genomics consortium, SGC, cholesterol metabolism; HET: HEM; 2.15A {Homo sapiens} PDB: 3sn5_A*
Probab=99.88 E-value=1.6e-22 Score=174.65 Aligned_cols=246 Identities=9% Similarity=0.094 Sum_probs=156.8
Q ss_pred CCCCCCCCCCC-CCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCc-ccCCCCCCCcc
Q 045977 34 KSYNFPPSPPA-LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDL-DFASRYEPCPS 111 (311)
Q Consensus 34 ~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~-~~~~~~~~~~~ 111 (311)
...+.||||++ +|++||++++..+++..+.+++++||+||++++++.++|+|+||+++++|+.+... .+.+... ...
T Consensus 10 ~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~~~~kyG~i~~~~~g~~~~vvv~dp~~~~~il~~~~~~~~~~~~~-~~~ 88 (491)
T 3dax_A 10 RQTGEPPLENGLIPYLGCALQFGANPLEFLRANQRKHGHVFTCKLMGKYVHFITNPLSYHKVLCHGKYFDWKKFHF-ATS 88 (491)
T ss_dssp CCTTCCCEEEEEESCTTTTGGGTCCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGTHHHHSCCTTEESSHHHH-HHH
T ss_pred cCCCCCCcCCCcccchhhHHHHhhCHHHHHHHHHHhcCCeEEEEECCeEEEEEcChHHHHHHHcCCccCChHHHHH-HHH
Confidence 44567899988 89999999987789999999999999999999999999999999999999975542 2222111 111
Q ss_pred cccccCCCceE-eccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccc--cCCCCCccchHHHHHH
Q 045977 112 KYNIYDGSGFV-TGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYS--EEGGPPCNLGTEVTNM 188 (311)
Q Consensus 112 ~~~~~~~~~l~-~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~--~~~~~~~d~~~~~~~~ 188 (311)
....+ .+++ ... |+.|+++|+.+. ++|+ ...++.+.+.+.+.+...++..... . ......+++...+..+
T Consensus 89 ~~~~g--~~~~~~~~-g~~w~~~r~~~~-~~f~-~~~l~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~l~~~~~~~ 161 (491)
T 3dax_A 89 AKAFG--HRSIDPMD-GNTTENINDTFI-KTLQ-GHALNSLTESMMENLQRIMRPPVSS--NSKTAAWVTEGMYSFCYRV 161 (491)
T ss_dssp HHHHT--CCCCCGGG-TSBCCCHHHHHH-HHHS-HHHHHHHHHHHHHHHHHHHC------------CCEEEEHHHHHHHH
T ss_pred HHHcC--CCcccccc-hhHHHHHHHHHH-HhcC-cccHHHHHHHHHHHHHHHHHhhccC--CcCCCCceeccHHHHHHHH
Confidence 11122 3444 444 889999999998 8999 9999999888888887777665331 1 0102357889999999
Q ss_pred HHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhccc-ccccccchhhHHHHHHHHHHHHHHHHHHH
Q 045977 189 TNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFR-TKMDLHGIGKKLRDVFWRYDELLEKMMTD 267 (311)
Q Consensus 189 ~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l-~~~~~~~~~~~~~~~~~~~~~~~~~~i~~ 267 (311)
++++++.++||.+++.. +.....+......+.. +...+|++ ..+|. ...++..++.+.+.+.+ +++
T Consensus 162 i~~~~~~~~fG~~~~~~---~~~~~~~~~~~~~~~~------~~~~~p~l~~~lp~-~~~~~~~~~~~~~~~~~---~~~ 228 (491)
T 3dax_A 162 MFEAGYLTIFGRDLTRR---DTQKAHILNNLDNFKQ------FDKVFPALVAGLPI-HMFRTAHNAREKLAESL---RHE 228 (491)
T ss_dssp HHHHHHHHHHCBCSTTG---GGHHHHHHHHHHHHHH------HHHHHHHHHTTCCG-GGSHHHHHHHHHHHHHT---SHH
T ss_pred HHHHhHHHHcCcccccc---cchhhhhhHHHHHHHH------HHHHhHHHHHhCCH-hhhhHHHHHHHHHHHHH---HHH
Confidence 99999999999988652 1111112222221111 22345643 22331 12234444444443332 223
Q ss_pred HHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhh
Q 045977 268 YEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYF 309 (311)
Q Consensus 268 ~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~ 309 (311)
+.+. .....|+++.+++...+.+ .++++++.++
T Consensus 229 ~~~~------~~~~~d~l~~ll~~~~~~~---~~~~~~i~~~ 261 (491)
T 3dax_A 229 NLQK------RESISELISLRMFLNDTLS---TFDDLEKAKT 261 (491)
T ss_dssp HHTT------CBSCCHHHHHHHHHHHHHB---CCCHHHHHHH
T ss_pred Hhhc------ccchhHHHHHHHHHHHhcC---CChHHHHHHH
Confidence 3322 2345799999987643321 3788887643
No 39
>3tyw_A Putative cytochrome P450; P450 monooxygenase, oxidoreductase; HET: HEM; 2.90A {Streptomyces coelicolor} PDB: 4fxb_A*
Probab=99.87 E-value=7.2e-21 Score=160.59 Aligned_cols=208 Identities=11% Similarity=0.166 Sum_probs=157.4
Q ss_pred cCCChhHHHHHHHHHhCCceEEeec-CeeEEEEcCHHHHHHHHHhCCcccCCCCC---CCcccccc----cCCCceEecc
Q 045977 54 LSSKLPESLQTLARRYGPLMQIRIG-PSTYVVVSNATVAKEIFTTHDLDFASRYE---PCPSKYNI----YDGSGFVTGP 125 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~v~v~~p~~i~~i~~~~~~~~~~~~~---~~~~~~~~----~~~~~l~~~~ 125 (311)
+..+++.++.+++++ ||||+++++ |.++|+|++|+.+++|+.++ .|++++. ........ ..+.++++.+
T Consensus 27 ~~~dp~~~~~~l~~~-Gpv~~~~~~~g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 103 (417)
T 3tyw_A 27 CPFAAPAEYAALRTD-DPVARVTLPTRREAWVVTRYDDVRELLSDP--RVSADIRRPGFPALGEGEQEAGARFRPFIRTD 103 (417)
T ss_dssp STTSCCTHHHHHHHT-CTEEEEECTTSCEEEEECCHHHHHHHHHCT--TEECCSSSTTCCCSSTTTSTTSSSCCCGGGCC
T ss_pred cccCchHHHHHHHhh-CCeeeeecCCCCCeEEEcCHHHHHHHHcCC--CcccCCccccccccccccccccccccchhhcC
Confidence 357899999999887 999999987 58999999999999999876 4666432 11111111 1234677665
Q ss_pred CChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCc
Q 045977 126 YGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRIS 204 (311)
Q Consensus 126 ~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~ 204 (311)
|+.|+++|++++ ++|+ +.+++.+.+.+.++++++++.+... |+++|+.+.+ ..+++++++.+ ||.+++.
T Consensus 104 -g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------g~~~d~~~~~~~~~~~~vi~~~-~G~~~~~ 173 (417)
T 3tyw_A 104 -APEHTRYRRMLL-PAFT-VRRVRAMRPAVQARVDEILDGMLAA------GGPVDLVSAYANAVSTSVICEL-LGIPRHD 173 (417)
T ss_dssp -HHHHHHHHHHHG-GGGC-HHHHHHTHHHHHHHHHHHHHHHHHH------CSSEEHHHHTHHHHHHHHHHHH-HTCCTTT
T ss_pred -CcHHHHHHHHHH-hhhC-HHHHHHHHHHHHHHHHHHHHHHHhh------CCCcchHHHHHHHHHHHHHHHH-hCCCHHH
Confidence 999999999999 9999 9999999999999999999999886 7689999987 58999999997 9998874
Q ss_pred cccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCH
Q 045977 205 ENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDL 284 (311)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dl 284 (311)
. ..+......+... .+..++..++.+.+.+++.++|++++++ ..+|+
T Consensus 174 ~-------~~~~~~~~~~~~~------------------~~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~d~ 220 (417)
T 3tyw_A 174 L-------EFFRDVTRISGSR------------------NSTAEQVSEALGGLFGLLGGLVAERREE--------PRDDL 220 (417)
T ss_dssp T-------THHHHHHHHHHSS------------------SSCTTHHHHHHHHHHHHHHHHHHHHHSS--------CCSSH
T ss_pred H-------HHHHHHHHHHhcc------------------cCCHHHHHHHHHHHHHHHHHHHHHHhhC--------CCCCH
Confidence 1 1233222222110 0123467778888999999999988853 23799
Q ss_pred HHHHHHhccccCCccccCHhhhhhhc
Q 045977 285 MGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 285 l~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
++.|++...++ ..++++|+..++
T Consensus 221 l~~ll~~~~~~---~~ls~~el~~~~ 243 (417)
T 3tyw_A 221 ISKLVTDHLVP---GNVTTEQLLSTL 243 (417)
T ss_dssp HHHHHHHTTTT---TSSCHHHHHHHH
T ss_pred HHHHHHhcccC---CCCCHHHHHHHH
Confidence 99999875443 249999988764
No 40
>2zwu_A Camphor 5-monooxygenase; P450CAM, camphor-hydroxylase, heme, iron, metal-binding, oxidoreductase, substrate-soaking, cytoplasm; HET: HEM CAM; 1.30A {Pseudomonas putida} PDB: 1gem_A* 1iwi_A* 2l8m_A* 2z97_A* 1gek_A* 2zax_A* 2zaw_A* 2zwt_A* 1rf9_A* 1lwl_A* 1iwk_A* 1iwj_A* 2zui_A* 2fe6_A* 1geb_A* 1yrc_A* 1noo_A* 1cp4_A* 1pha_A* 1phc_A* ...
Probab=99.87 E-value=1.7e-21 Score=164.07 Aligned_cols=224 Identities=14% Similarity=0.138 Sum_probs=162.6
Q ss_pred CCCCCCCCCCCCCCee--ccccc-----cCCChhHHHHHHHHHhC--CceEEe-ecCeeEEEEcCHHHHHHHHHhCCccc
Q 045977 33 TKSYNFPPSPPALPII--GHSYL-----LSSKLPESLQTLARRYG--PLMQIR-IGPSTYVVVSNATVAKEIFTTHDLDF 102 (311)
Q Consensus 33 ~~~~~~ppgp~~~p~~--G~~~~-----~~~~~~~~~~~~~~~yG--~v~~~~-~~~~~~v~v~~p~~i~~i~~~~~~~~ 102 (311)
.++.+.||||++.|.. +.+-. +..+++..+.+| ++|| |||+++ +| +.|+|++++++++|+.+ ...|
T Consensus 7 ~~~~~~~~~p~~~p~~~~~~~~~~~~~~~~~~p~~~~~~l-~~~G~~pv~~~~~~g--~~vvv~~~~~v~~vl~~-~~~f 82 (415)
T 2zwu_A 7 QSNANLAPLPPHVPEHLVFDFDMYNPSNLSAGVQEAWAVL-QESNVPDLVWTRCNG--GHWIATRGQLIREAYED-YRHF 82 (415)
T ss_dssp ----CCCCCCTTSCGGGBCCCCTTSCTTGGGCHHHHHHGG-GSTTSCSEEEECGGG--CEEEECSHHHHHHHHHC-TTTE
T ss_pred cCccccCCCCCCCCcccccccCcCChhhcccChHHHHHHH-HhcCCCCeEEecCCC--CeEEEcCHHHHHHHHcC-cccc
Confidence 4567889999998864 43211 235788999999 4799 999998 54 68999999999999974 4467
Q ss_pred CCCC-CCCcccccccCCCc-eEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCcc
Q 045977 103 ASRY-EPCPSKYNIYDGSG-FVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCN 180 (311)
Q Consensus 103 ~~~~-~~~~~~~~~~~~~~-l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d 180 (311)
++++ ....... .. +.+ +++.+ |+.|+++|++++ ++|+ +..++.+.+.+.++++.+++.|... | .+|
T Consensus 83 ~~~~~~~~~~~~-~~-~~~~l~~~~-g~~~~~~R~~~~-~~f~-~~~l~~~~~~i~~~~~~l~~~l~~~------~-~~d 150 (415)
T 2zwu_A 83 SSECPFIPREAG-EA-YDFIPTSMD-PPEQRQFRALAN-QVVG-MPVVDKLENRIQELACSLIESLRPQ------G-QCN 150 (415)
T ss_dssp ETTSCSSSHHHH-HH-CCCTTTTCC-TTTTHHHHHHHH-HHHS-HHHHHHHHHHHHHHHHHHHHHHGGG------T-EEE
T ss_pred CCCcccCCCCcc-cc-ccccCccCC-CcHHHHHHHHHH-hhhC-HHHHHHHHHHHHHHHHHHHHHHHhc------C-Ccc
Confidence 7776 2221111 11 245 77665 999999999999 9999 9999999999999999999999874 4 689
Q ss_pred chHHH-HHHHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHH
Q 045977 181 LGTEV-TNMTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDE 259 (311)
Q Consensus 181 ~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~ 259 (311)
+.+.+ ..+++++++.+ ||.+++. .+.+.+....+... ..| . +..++.+.+.+
T Consensus 151 ~~~~~~~~~~~~vi~~~-~G~~~~~-------~~~~~~~~~~~~~~--------~~P---------~--~~~~~~~~~~~ 203 (415)
T 2zwu_A 151 FTEDYAEPFPIRIFMLL-AGLPEED-------IPHLKYLTDQMTRP--------DGS---------M--TFAEAKEALYD 203 (415)
T ss_dssp HHHHTTTHHHHHHHHHH-HTCCGGG-------HHHHHHHHHHHHSC--------CSS---------S--CHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHH-cCCCHHH-------HHHHHHHHHHHHhc--------cCH---------H--HHHHHHHHHHH
Confidence 99765 78999999998 9998763 22344443333211 012 1 45567778899
Q ss_pred HHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 260 LLEKMMTDYEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 260 ~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
++.++|++++++ . ..|+++.|++...+ +..++++++..++
T Consensus 204 ~~~~~i~~r~~~------~--~~dll~~ll~~~~~---~~~l~~~~i~~~~ 243 (415)
T 2zwu_A 204 YLIPIIEQRRQK------P--GTDAISIVANGQVN---GRPITSDEAKRMC 243 (415)
T ss_dssp HHHHHHHHHHHS------C--CSSHHHHHHTCEET---TEECCHHHHHHHH
T ss_pred HHHHHHHHHHhC------C--CCCHHHHHHHhhhc---CCCCCHHHHHHHH
Confidence 999999998864 1 36999999987432 2359999988764
No 41
>2wm5_A CYP124, putative cytochrome P450 124; metal-binding, oxidoreductase, omega-hydroxylation, iron, heme, fatty acid, monooxygenase; HET: HEM; 1.50A {Mycobacterium tuberculosis} PDB: 2wm4_A*
Probab=99.87 E-value=5.3e-21 Score=162.03 Aligned_cols=214 Identities=14% Similarity=0.088 Sum_probs=159.4
Q ss_pred CChhHHHHHHHHHhCCceEEeec-------CeeEEEEcCHHHHHHHHHhCCcccCCCCCC--C-cccccccCCCceEecc
Q 045977 56 SKLPESLQTLARRYGPLMQIRIG-------PSTYVVVSNATVAKEIFTTHDLDFASRYEP--C-PSKYNIYDGSGFVTGP 125 (311)
Q Consensus 56 ~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~--~-~~~~~~~~~~~l~~~~ 125 (311)
.+++..+.+|+ +|||||+++++ +.++|+|++|+.+++|+.++ ..|++++.. . ....+...+.++++.+
T Consensus 44 ~~p~~~~~~l~-~~Gpv~~~~~~~~~~~~~g~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~l~~~d 121 (435)
T 2wm5_A 44 DVRDGAFATLR-REAPISFWPTIELPGFVAGNGHWALTKYDDVFYASRHP-DIFSSYPNITINDQTPELAEYFGSMIVLD 121 (435)
T ss_dssp HHHHHHHHHHH-HHCSEEEECCCCC---CCCCCEEEECSHHHHHHHHHCT-TTEECSSCCSSSCCCHHHHHHHHGGGGCC
T ss_pred CChhHHHHHHH-hcCCeEecccccccccCCCCCeEEEcCHHHHHHHHcCc-ccccCccccccCccccchhhhccccccCC
Confidence 46888999995 79999999986 66899999999999999865 457777532 1 1122211134677765
Q ss_pred CChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCc
Q 045977 126 YGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRIS 204 (311)
Q Consensus 126 ~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~ 204 (311)
|+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... . + +.++|+.+.+ ..+++++++.+ ||.+++.
T Consensus 122 -g~~h~~~R~~l~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~--~-~-~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~ 193 (435)
T 2wm5_A 122 -DPRHQRLRSIVS-RAFT-PKVVARIEAAVRDRAHRLVSSMIAN--N-P-DRQADLVSELAGPLPLQIICDM-MGIPKAD 193 (435)
T ss_dssp -TTHHHHHHHHHH-HTCC-HHHHHHHHHHHHHHHHHHHHHHHHH--C-T-TSEEEHHHHTTTHHHHHHHHHH-HTCCGGG
T ss_pred -cHHHHHHHHHhH-HhhC-HHHHHHHHHHHHHHHHHHHHHHHhc--C-C-CCcEehHHHHHHHHHHHHHHHH-cCCCHHH
Confidence 999999999999 9999 9999999999999999999999875 2 1 3478998766 78999999999 9998863
Q ss_pred cccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCH
Q 045977 205 ENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDL 284 (311)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dl 284 (311)
.+.+.+....+.... .|++ + +..++..++.+++.+++.++|++++++ . .+|+
T Consensus 194 -------~~~~~~~~~~~~~~~--------~p~~--~---~~~~~~~~~~~~~~~~~~~~i~~r~~~------~--~~dl 245 (435)
T 2wm5_A 194 -------HQRIFHWTNVILGFG--------DPDL--A---TDFDEFMQVSADIGAYATALAEDRRVN------H--HDDL 245 (435)
T ss_dssp -------HHHHHHHHHHHHHTT--------CTTS--C---CCHHHHHHHHHHHHHHHHHHHHHHHHS------C--CSSH
T ss_pred -------HHHHHHHHHHHhccC--------Ccch--h---hhHHHHHHHHHHHHHHHHHHHHHHhcC------C--CCCH
Confidence 224444444443321 1321 1 123567778889999999999998864 1 3699
Q ss_pred HHHHHHhccccCCccccCHhhhhhhc
Q 045977 285 MGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 285 l~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
++.|++...+ +..++++|+..++
T Consensus 246 l~~ll~~~~~---~~~ls~~ei~~~~ 268 (435)
T 2wm5_A 246 TSSLVEAEVD---GERLSSREIASFF 268 (435)
T ss_dssp HHHHHHCCBT---TBCCCHHHHHHHH
T ss_pred HHHHHhhhcc---CCCCCHHHHHHHH
Confidence 9999987432 2459999988764
No 42
>1odo_A Putative cytochrome P450 154A1; P450 monooxygenase, oxidoreductase; HET: HEM PIM; 1.85A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.87 E-value=1.3e-21 Score=164.62 Aligned_cols=214 Identities=17% Similarity=0.207 Sum_probs=154.5
Q ss_pred ccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCC--CCc---cc---cccc--CCCceE
Q 045977 53 LLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYE--PCP---SK---YNIY--DGSGFV 122 (311)
Q Consensus 53 ~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~--~~~---~~---~~~~--~~~~l~ 122 (311)
.+..+++..+.++ ++||||+++++++.++|+|++|+++++|+.++. +++++. +.. .. .+.. .+.+++
T Consensus 12 ~~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 88 (408)
T 1odo_A 12 PTGADHHTEHRTL-REGGPATWVDVLGVQAWSVSDPVLLKQLLTSSD--VSKDARAHWPAFGEVVGTWPLALWVAVENMF 88 (408)
T ss_dssp TTCTTHHHHHHHH-HTTCSEEEEEETTEEEEEECCHHHHHHHTTCTT--EESCHHHHCTTHHHHTTTCTTTHHHHCCSGG
T ss_pred cccCChHHHHHHH-HHhCCeEEeccCCCCEEEECCHHHHHHHHcCCC--ccccccccccccccccccccccccccccccc
Confidence 4567899999999 999999999998889999999999999997653 334321 111 00 0100 123666
Q ss_pred eccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHH-HHHHHHHHHHHhccc
Q 045977 123 TGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVT-NMTNNLIFRMIMNKK 201 (311)
Q Consensus 123 ~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~ 201 (311)
+.+ |+.|+++|++++ ++|+ +.+++.+.+.+.++++++++.|.+. . + ++++|+.+.+. .+++++++. +||.+
T Consensus 89 ~~~-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~--~-~-~~~~d~~~~~~~~~~~~vi~~-~~G~~ 160 (408)
T 1odo_A 89 TAY-GPNHRKLRRLVA-PAFS-ARRVDAMRPAVEAMVTGLVDRLAEL--P-A-GEPVDLRQELAYPLPIAVIGH-LMGVP 160 (408)
T ss_dssp GCC-HHHHHHHHHTTG-GGGS-HHHHHHHHHHHHHHHHHHHHHHHHS--C-T-TSCEEHHHHTTTHHHHHHHHH-HHTCC
T ss_pred ccC-ChHHHHHHHHhh-hhcC-HHHHHHHHHHHHHHHHHHHHHHHhh--c-C-CCCcchHHHHhhhhHHHHHHH-HhCCC
Confidence 654 999999999999 9999 9999999999999999999999863 2 2 55799998887 599999996 69987
Q ss_pred cCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCC
Q 045977 202 RISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDD 281 (311)
Q Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 281 (311)
.+ +.+.+......+... . . . .++..++.+.+.+++.++|++++++ . .
T Consensus 161 ~~-------~~~~~~~~~~~~~~~----~----------~--~--~~~~~~~~~~~~~~~~~~i~~r~~~------~--~ 207 (408)
T 1odo_A 161 QD-------RRDGFRALVDGVFDT----T----------L--D--QAEAQANTARLYEVLDQLIAAKRAT------P--G 207 (408)
T ss_dssp HH-------HHHHHHHHHHHHHCT----T----------C--C--HHHHHHHHHHHHHHHHHHHHHHHHS------C--C
T ss_pred HH-------HHHHHHHHHHHHhcc----c----------C--C--HHHHHHHHHHHHHHHHHHHHHHhhC------C--C
Confidence 64 223344443333210 0 0 1 2456677788999999999988864 1 2
Q ss_pred CCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 282 GDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 282 ~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
+|+++.|+++..++.++..++++|+.+++
T Consensus 208 ~d~l~~ll~~~~~~~~~~~l~~~ei~~~~ 236 (408)
T 1odo_A 208 DDMTSLLIAARDDEGDGDRLSPEELRDTL 236 (408)
T ss_dssp SSHHHHHHHHHCC-----CCCHHHHHHHH
T ss_pred CCHHHHHHHhcccccccCCCCHHHHHHHH
Confidence 69999999875332112459999988765
No 43
>2y5n_A MYCG, P-450-like protein; oxidoreductase, mycinamicin biosynthesis; HET: HEM MYV; 1.62A {Micromonospora griseorubida} PDB: 2y46_A* 2y5z_A* 2y98_A* 2yca_A* 2ygx_A*
Probab=99.87 E-value=6.4e-21 Score=160.64 Aligned_cols=209 Identities=10% Similarity=0.145 Sum_probs=153.9
Q ss_pred cCCChhHHHHHHHHHhCCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccCCCCCC-Cccccccc--CCCceEeccCChh
Q 045977 54 LSSKLPESLQTLARRYGPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFASRYEP-CPSKYNIY--DGSGFVTGPYGAY 129 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~-~~~~~~~~--~~~~l~~~~~g~~ 129 (311)
+..+++..+.++ ++||||+++++ ++.+.|+|++|+.+++|+.++ .|.+++.. .....+.. .+.++++.+ |+.
T Consensus 35 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~i~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~ 110 (417)
T 2y5n_A 35 HGLTLAGRYGEL-QETEPVSRVRPPYGEEAWLVTRYEDVRAVLGDG--RFVRGPSMTRDEPRTRPEMVKGGLLSMD-PPE 110 (417)
T ss_dssp SSCCCCHHHHHH-HHHCSEEEEECSBSCCEEEECSHHHHHHHHTCT--TEESGGGGTSCCCBSSSSCCCCSGGGCC-TTH
T ss_pred hccCchHHHHHH-HhcCCeEeeccCCCceEEEECCHHHHHHHHcCC--CcccCccccccccccCcccccccCccCC-chH
Confidence 457899999999 89999999997 789999999999999999864 36555432 11111111 235676664 999
Q ss_pred HHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCccccc
Q 045977 130 WRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRISENEI 208 (311)
Q Consensus 130 w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~ 208 (311)
|+++|++++ ++|+ +..++.+.+.+.++++++++.|... +.++|+.+.+ ..+++++++. +||.+.+.
T Consensus 111 h~~~R~~l~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~------~~~vdl~~~~~~~~~~~vi~~-~~G~~~~~---- 177 (417)
T 2y5n_A 111 HSRLRRLVV-KAFT-ARRAESLRPRAREIAHELVDQMAAT------GQPADLVAMFARQLPVRVICE-LLGVPSAD---- 177 (417)
T ss_dssp HHHHHHHHH-HHSC-HHHHHHTHHHHHHHHHHHHHHHHHH------CSSEEHHHHTTTTHHHHHHHH-HHTCCGGG----
T ss_pred HHHHHHHHh-hhcC-HHHHHHHHHHHHHHHHHHHHHHHhC------CCCeeHHHHHHHHhHHHHHHH-HcCCCHHH----
Confidence 999999999 9999 9999999999999999999999853 4379998766 4699999998 69988752
Q ss_pred hHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 045977 209 ENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGIL 288 (311)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~l 288 (311)
.+.+......+.. .+. .+ .++..++.+.+.+++.++|+++++.. .+|+++.|
T Consensus 178 ---~~~~~~~~~~~~~---------~~~-------~~-~~~~~~~~~~l~~~~~~~i~~r~~~~--------~~dll~~l 229 (417)
T 2y5n_A 178 ---HDRFTRWSGAFLS---------TAE-------VT-AEEMQEAAEQAYAYMGDLIDRRRKEP--------TDDLVSAL 229 (417)
T ss_dssp ---HHHHHHHHHTTST---------TCC-------CC-HHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHH
T ss_pred ---HHHHHHHHHHHhc---------ccC-------CC-HHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHHH
Confidence 2223332221110 000 01 24566788889999999999988642 26999999
Q ss_pred HHhccccCCccccCHhhhhhhc
Q 045977 289 LETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 289 l~~~~~~~~~~~l~~~ei~~~i 310 (311)
++...+ +..++++|+.+++
T Consensus 230 l~~~~~---~~~ls~~ei~~~~ 248 (417)
T 2y5n_A 230 VQARDQ---QDSLSEQELLDLA 248 (417)
T ss_dssp HHCCBT---TBCCCHHHHHHHH
T ss_pred Hhhhcc---CCCCCHHHHHHHH
Confidence 987532 2359999988765
No 44
>1n97_A CYP175A1; electron transport; HET: SRT HEM; 1.80A {Thermus thermophilus} SCOP: a.104.1.1 PDB: 1wiy_A*
Probab=99.86 E-value=7.4e-23 Score=171.21 Aligned_cols=196 Identities=11% Similarity=0.054 Sum_probs=144.0
Q ss_pred CCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCC-CCCcccccccCCC
Q 045977 41 SPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRY-EPCPSKYNIYDGS 119 (311)
Q Consensus 41 gp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~-~~~~~~~~~~~~~ 119 (311)
+++.+|++||+..+..+++.++.+++++||||++ ++++.++|+|+||+++++|+.++ .|.+++ .......+.+ .
T Consensus 3 ~~~~~p~iGnl~~~~~~p~~~~~~l~~~yGpv~~-~~g~~~~vvv~~~~~i~~il~~~--~f~~~~~~~~~~~~~~g--~ 77 (389)
T 1n97_A 3 RLSLREAWPYLKDLQQDPLAVLLAWGRAHPRLFL-PLPRFPLALIFDPEGVEGALLAE--GTTKATFQYRALSRLTG--R 77 (389)
T ss_dssp ECCHHHHHHHHHHHHHCHHHHHHHHHHHCSEEEE-CCTTCCEEEECSHHHHHHHHHCT--TEECCSHHHHHHHHHHC--S
T ss_pred ccccccccccHHHHhhChHHHHHHHHHHcCCeeE-ecCCccEEEECCHHHHHHHHhcC--CCCCChhHHHHHHHHhC--C
Confidence 4556899999988866799999999999999999 99888999999999999999876 577765 2212222222 4
Q ss_pred ceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHHHHHHHhc
Q 045977 120 GFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFRMIMN 199 (311)
Q Consensus 120 ~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG 199 (311)
++++.+ |+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|. . + ++|+.+.+..+++|+++.++||
T Consensus 78 ~l~~~~-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~-~------~-~~dl~~~~~~~~~~vi~~~~fG 146 (389)
T 1n97_A 78 GLLTDW-GESWKEARKALK-DPFL-PKNVRGYREAMEEEARAFFGEWR-G------E-ERDLDHEMLALSLRLLGRALFG 146 (389)
T ss_dssp STTTCC-HHHHHHHHHHHC-GGGS-HHHHHTTHHHHHHHHHHHHHTCC-S------C-CEEHHHHHHHHHHHHHHHHHHS
T ss_pred ccccCC-cHHHHHHHHHhC-cccC-HHHHHHHHHHHHHHHHHHHHHcc-C------C-cCcHHHHHHHHHHHHHHHHHcC
Confidence 677665 999999999999 9999 99999999999999999988875 2 3 6999999999999999999999
Q ss_pred cccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHH
Q 045977 200 KKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMT 266 (311)
Q Consensus 200 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~ 266 (311)
.+++ + .+.+.+..+...... ..++++.++| .+..++..++.+.+.+++.+.|+
T Consensus 147 ~~~~-------~--~~~~~~~~~~~~~~~----~~~~~~~~~p-~~~~~~~~~~~~~~~~~~~~~i~ 199 (389)
T 1n97_A 147 KPLS-------P--SLAEHALKALDRIMA----QTRSPLALLD-LAAEARFRKDRGALYREAEALIV 199 (389)
T ss_dssp SCCC-------H--HHHHHHHHHHHHHHH----HHHCGGGGGC-HHHHHHHHHHHHHHHHHHGGGTT
T ss_pred Ccch-------H--HHHHHHHHHHHHHHH----HHhhHHHhcC-CchhHHHHHHHHHHHHHHHHHHH
Confidence 9886 1 344444444332210 1112223332 12234455555666666655553
No 45
>3b6h_A Prostacyclin synthase; enzyme-inhibitor complex, CYP8A1, cytochrome P450, endoplasmic reticulum, fatty acid biosynthesis, heme, iron, isomerase; HET: BOG MXD HEM; 1.62A {Homo sapiens} PDB: 2iag_A*
Probab=99.86 E-value=2e-21 Score=167.91 Aligned_cols=248 Identities=8% Similarity=0.004 Sum_probs=153.5
Q ss_pred CCCCCCCCCCC-CCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCC-Ccc
Q 045977 34 KSYNFPPSPPA-LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEP-CPS 111 (311)
Q Consensus 34 ~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~-~~~ 111 (311)
++.+.||||++ +|++||++.+..+++.++.+|+++|||||++++|+.++|+|+||+++++++.++...+..++.. ...
T Consensus 15 ~~~~~PPgp~~~~P~iG~~~~~~~~~~~~~~~l~~kYG~i~~v~lg~~~~vvv~~p~~~~~il~~~~~~~~~~~~~~~~~ 94 (498)
T 3b6h_A 15 RRPGEPPLDLGSIPWLGYALDFGKDAASFLTRMKEKHGDIFTILVGGRYVTVLLDPHSYDAVVWEPRTRLDFHAYAIFLM 94 (498)
T ss_dssp CCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCGGGHHHHHTCCTTTEECCHHHHHHH
T ss_pred cCCCCCCCCCCCCcchhhHHHhccCHHHHHHHHHHHcCCeEEEEECCeeEEEEcCHHHHHHHHhCccccCCchhhHHHHH
Confidence 55678999998 8999999888667899999999999999999999999999999999999997655323322211 111
Q ss_pred cccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHH
Q 045977 112 KYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNN 191 (311)
Q Consensus 112 ~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~ 191 (311)
....+ .+++... |+.| |+++. ++|+ ...++.+.+.+.+++...++...... ... ...+++...+..++++
T Consensus 95 ~~~~g--~~~~~~~-~~~~---rr~~~-~~~~-~~~l~~~~~~~~~~~~~~l~~~~~~~-~~~-~~~~~l~~~~~~vi~~ 164 (498)
T 3b6h_A 95 ERIFD--VQLPHYS-PSDE---KARMK-LTLL-HRELQALTEAMYTNLHAVLLGDATEA-GSG-WHEMGLLDFSYSFLLR 164 (498)
T ss_dssp HHTSC--CCCTTCC-HHHH---HHHHH-TTSS-HHHHHHHHHHHHHHHHHHHHHHHHHH-CSS-CEEEEHHHHHHHHHHH
T ss_pred HHHcC--CCccccC-HHHH---HHHHH-Hhhc-hHhHHHHHHHHHHHHHHHHhhccccc-CCC-cceecHHHHHHHHHHH
Confidence 11222 3444443 6666 56666 7899 88898888888888877776654320 111 2347888999999999
Q ss_pred HHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhccccc-ccccchhhHHHHHHHHHHHHHHHHHHHHHh
Q 045977 192 LIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTK-MDLHGIGKKLRDVFWRYDELLEKMMTDYED 270 (311)
Q Consensus 192 vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 270 (311)
+++.++||.+++.. +..........+.++...+.. +...+|++.+ +......++..++.+.+.+. +++++.+
T Consensus 165 ~~~~~~fG~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~~~~~p~l~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 237 (498)
T 3b6h_A 165 AGYLTLYGIEALPR--THESQAQDRVHSADVFHTFRQ--LDRLLPKLARGSLSVGDKDHMCSVKSRLWKL---LSPARLA 237 (498)
T ss_dssp HHHHHHHCBSCSSC--CHHHHHHHHHHHHHHHHHHHH--HHHHHHHHHHTCCCHHHHHHHHHHHHHHHHH---TCHHHHT
T ss_pred HHHHhhcCcccccc--cccchhhHHHhhHHHHHHHHH--HHhhHHHHHHHhcCchhhHHHHHHHHHHHHH---HHHHHHh
Confidence 99999999988642 111111122222333222211 2235563322 21011122333333333332 2223332
Q ss_pred hcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhh
Q 045977 271 DNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIK 307 (311)
Q Consensus 271 ~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~ 307 (311)
. .....|+++.+++...+.+ .++++++.
T Consensus 238 ~------~~~~~d~l~~ll~~~~~~~---~~~~~~~~ 265 (498)
T 3b6h_A 238 R------RAHRSKWLESYLLHLEEMG---VSEEMQAR 265 (498)
T ss_dssp T------CBSCCHHHHHHHHHHHHTT---CCHHHHHH
T ss_pred c------cccHHHHHHHHHHHHHhCC---CCHHHHHH
Confidence 2 2345799999997754322 36777765
No 46
>3a4g_A Vitamin D hydroxylase; cytochrome P450, hemoprotein, monoox oxidoreductase; HET: HEM; 1.75A {Pseudonocardia autotrophica} PDB: 3a4h_A* 3a51_A* 3a4z_A* 3a50_A*
Probab=99.86 E-value=1.1e-20 Score=158.88 Aligned_cols=207 Identities=10% Similarity=0.148 Sum_probs=153.6
Q ss_pred cCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcc-----cccccCCCceEeccCCh
Q 045977 54 LSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPS-----KYNIYDGSGFVTGPYGA 128 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~-----~~~~~~~~~l~~~~~g~ 128 (311)
+..+++..+.++ ++|||||++++++.++|+|++|+.+++++.++. |++++..... ......+.++++.+ |+
T Consensus 18 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 93 (411)
T 3a4g_A 18 FWQNPHPAYAAL-RAEDPVRKLALPDGPVWLLTRYADVREAFVDPR--LSKDWRHTLPEDQRADMPATPTPMMILMD-PP 93 (411)
T ss_dssp GTTCCHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHTCTT--EESCGGGGSCGGGCTTCCSCSSCCGGGCC-TT
T ss_pred hhcCchHHHHHH-HhcCCeeeccCCCCCEEEEecHHHHHHHHhCCC--cccccccccccccccccCcccccccccCC-ch
Confidence 457899999999 999999999999999999999999999998653 7776532110 11111235666664 99
Q ss_pred hHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHH-HHHHHHHHHHHHHhccccCcccc
Q 045977 129 YWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTE-VTNMTNNLIFRMIMNKKRISENE 207 (311)
Q Consensus 129 ~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~ 207 (311)
.|+++|++++ ++|+ +..++.+.+.+.++++++++.|.. ++++|+.+. ...+++++++.+ ||.+.+.
T Consensus 94 ~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~-------~~~vd~~~~~~~~~~~~vi~~~-~G~~~~~--- 160 (411)
T 3a4g_A 94 DHTRLRKLVG-RSFT-VRRMNELEPRITEIADGLLAGLPT-------DGPVDLMREYAFQIPVQVICEL-LGVPAED--- 160 (411)
T ss_dssp HHHHHHHHHH-TTCC-HHHHHHHHHHHHHHHHHHHHHSCS-------SSCEEHHHHTTTTHHHHHHHHH-HTCCGGG---
T ss_pred HHHHHHHHhh-hhhC-HHHHHHHHHHHHHHHHHHHHHHHh-------cCCccHHHHHHHHhHHHHHHHH-hCCCHHH---
Confidence 9999999999 9999 999999999999999999999865 337899754 568999999975 9988752
Q ss_pred chHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 045977 208 IENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGI 287 (311)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ 287 (311)
.+.+......+.. ..| + ++..++.+.+.+++.++|++++++. .+|+++.
T Consensus 161 ----~~~~~~~~~~~~~---------~~p--------~--~~~~~~~~~~~~~~~~~i~~r~~~~--------~~d~l~~ 209 (411)
T 3a4g_A 161 ----RDDFSAWSSVLVD---------DSP--------A--DDKNAAMGKLHGYLSDLLERKRTEP--------DDALLSS 209 (411)
T ss_dssp ----HHHHHHHHHHHTT---------SSC--------T--TTHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHH
T ss_pred ----HHHHHHHHHHHhc---------cCC--------H--HHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHH
Confidence 2233333322211 012 1 2455677889999999999988641 2699999
Q ss_pred HHHhccccCCccccCHhhhhhhc
Q 045977 288 LLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 288 ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
|++...++ +..++++|+.+++
T Consensus 210 ll~~~~~~--~~~ls~~ei~~~~ 230 (411)
T 3a4g_A 210 LLAVSDED--GDRLSQEELVAMA 230 (411)
T ss_dssp HHHCCCTT--CCCCCHHHHHHHH
T ss_pred HHHhhccC--CCCCCHHHHHHHH
Confidence 99874312 2459999988765
No 47
>1z8o_A 6-deoxyerythronolide B hydroxylase; heme, CYP, erythromycin, oxidoreductase; HET: HEM DEB; 1.70A {Saccharopolyspora erythraea} SCOP: a.104.1.1 PDB: 1z8p_A* 1z8q_A* 1jio_A* 1jip_A* 1eup_A* 1egy_A* 1jin_A* 1oxa_A*
Probab=99.86 E-value=6.5e-21 Score=160.19 Aligned_cols=209 Identities=11% Similarity=0.090 Sum_probs=155.1
Q ss_pred cCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCC--C----ccc---cc-cc----CCC
Q 045977 54 LSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEP--C----PSK---YN-IY----DGS 119 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~--~----~~~---~~-~~----~~~ 119 (311)
+..+++..+.++ ++||||+++++++.++|+|++|+.+++++.++ .|++++.. . ... .+ .. .+.
T Consensus 12 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (404)
T 1z8o_A 12 FHVDWYRTYAEL-RETAPVTPVRFLGQDAWLVTGYDEAKAALSDL--RLSSDPKKKYPGVEVEFPAYLGFPEDVRNYFAT 88 (404)
T ss_dssp GTSSHHHHHHHH-HHHCSEEEEEETTEEEEEECSHHHHHHHHHCT--TEECCTTCCCTTCCCCCGGGTTCCHHHHHHHSS
T ss_pred cccCcHHHHHHH-HhcCCeeeecCCCceEEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccchhhhccc
Confidence 356899999999 99999999999999999999999999999866 47666543 1 110 11 10 134
Q ss_pred ceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHh
Q 045977 120 GFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIM 198 (311)
Q Consensus 120 ~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~f 198 (311)
++++.+ |+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|.. ++++|+.+.+ ..+++++++.+ |
T Consensus 89 ~l~~~~-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~-------~~~~d~~~~~~~~~~~~vi~~~-~ 157 (404)
T 1z8o_A 89 NMGTSD-PPTHTRLRKLVS-QEFT-VRRVEAMRPRVEQITAELLDEVGD-------SGVVDIVDRFAHPLPIKVICEL-L 157 (404)
T ss_dssp SGGGCC-TTHHHHHHHHHH-TTSC-HHHHHHTHHHHHHHHHHHHHTSCS-------SSEEEHHHHTTTHHHHHHHHHH-T
T ss_pred ccccCC-CcHHHHHHHHHH-HhhC-HHHHHHHHHHHHHHHHHHHHhhhh-------cCCcchHHHHhHHHHHHHHHHH-h
Confidence 666665 999999999999 9999 999999999999999999998864 4479998655 68999999985 9
Q ss_pred ccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 045977 199 NKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQE 278 (311)
Q Consensus 199 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 278 (311)
|.+.+. .+.+......+.. . ..| . .++..++.+.+.+++.+.|++++++.
T Consensus 158 G~~~~~-------~~~~~~~~~~~~~-~-------~~p--------~-~~~~~~~~~~~~~~~~~~i~~r~~~~------ 207 (404)
T 1z8o_A 158 GVDEKY-------RGEFGRWSSEILV-M-------DPE--------R-AEQRGQAAREVVNFILDLVERRRTEP------ 207 (404)
T ss_dssp TCCGGG-------TTTHHHHHHHHHC-C-------CGG--------G-HHHHHHHHHHHHHHHHHHHHHHHHSC------
T ss_pred CCCHHH-------HHHHHHHHHHHhc-c-------CCh--------h-HHHHHHHHHHHHHHHHHHHHHHHhCC------
Confidence 988753 1123333333322 1 001 1 45667788889999999999988642
Q ss_pred CCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 279 NDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 279 ~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.+|+++.|++...++ +..++++|+.+++
T Consensus 208 --~~dll~~ll~~~~~~--~~~l~~~ei~~~~ 235 (404)
T 1z8o_A 208 --GDDLLSALIRVQDDD--DGRLSADELTSIA 235 (404)
T ss_dssp --CSSHHHHHHHCEETT--TEECCHHHHHHHH
T ss_pred --CCCHHHHHHhhhccc--CCCCCHHHHHHHH
Confidence 269999999872222 2359999988765
No 48
>3ejb_B Biotin biosynthesis cytochrome P450-like enzyme; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Bacillus subtilis} SCOP: a.104.1.0 PDB: 3ejd_B* 3eje_B*
Probab=99.86 E-value=8.1e-21 Score=159.76 Aligned_cols=212 Identities=10% Similarity=0.080 Sum_probs=153.8
Q ss_pred CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCccc---c-cccCCCceEeccCChhH
Q 045977 55 SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSK---Y-NIYDGSGFVTGPYGAYW 130 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~---~-~~~~~~~l~~~~~g~~w 130 (311)
..+++..+.++ ++||||+++++++.++|+|++|+.+++++.++ ..|++++...... . ....+.++++.+ |+.|
T Consensus 12 ~~~p~~~~~~~-r~yGpv~~~~~~~~~~vvv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~~h 88 (404)
T 3ejb_B 12 LKNPYSFYDTL-RAVHPIYKGSFLKYPGWYVTGYEETAAILKDA-RFKVRTPLPESSTKYQDLSHVQNQMMLFQN-QPDH 88 (404)
T ss_dssp HHCHHHHHHHH-HHHCSEEEEEETTEEEEEECCHHHHHHHHHCT-TEECCCSSCTTCCTTHHHHHHHHTSGGGCC-TTHH
T ss_pred ccCchHHHHHH-HhhCCEeeccCCCCCEEEEecHHHHHHHHhCc-ccccCcccccccccccchhhhhhcchhhcC-CchH
Confidence 46789999888 68999999999999999999999999999876 4676665322111 0 011124666665 9999
Q ss_pred HHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHH-HHHHHHHHHHHHHhccccCccccch
Q 045977 131 RFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTE-VTNMTNNLIFRMIMNKKRISENEIE 209 (311)
Q Consensus 131 ~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~~ 209 (311)
+++|++++ ++|+ +.+++.+.+.+.++++.+++.|.. ++.+|+... ...+++++++.+ ||.+.+.
T Consensus 89 ~~~Rr~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~-------~~~~d~~~~~~~~~~~~vi~~~-~G~~~~~----- 153 (404)
T 3ejb_B 89 RRLRTLAS-GAFT-PRTTESYQPYIIETVHHLLDQVQG-------KKKMEVISDFAFPLASFVIANI-IGVPEED----- 153 (404)
T ss_dssp HHHHHHHH-GGGS-HHHHHTTHHHHHHHHHHHHHTTTT-------TSEEEHHHHTHHHHHHHHHHHH-HTCCGGG-----
T ss_pred HHHHHHHH-hhcC-HHHHHHHHHHHHHHHHHHHHHhhh-------cCCcchHHHHHHHHHHHHHHHH-cCCCHHH-----
Confidence 99999999 9999 999999999999999999998875 346887654 556999999985 8987753
Q ss_pred HHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHH
Q 045977 210 NEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILL 289 (311)
Q Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll 289 (311)
.+.+.+....+...+. .|+. ....++..++.+.+.+++.+.|+++++. ..+|+++.|+
T Consensus 154 --~~~~~~~~~~~~~~~~-------~p~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll 211 (404)
T 3ejb_B 154 --REQLKEWAASLIQTID-------FTRS-----RKALTEGNIMAVQAMAYFKELIQKRKRH--------PQQDMISMLL 211 (404)
T ss_dssp --HHHHHHHHHHHHGGGS-------TTCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHH
T ss_pred --HHHHHHHHHHHHHhcc-------CCCC-----HHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CcchHHHHHH
Confidence 2234444433332221 1211 1234566778889999999999998853 2379999999
Q ss_pred HhccccCCccccCHhhhhhhc
Q 045977 290 ETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 290 ~~~~~~~~~~~l~~~ei~~~i 310 (311)
...+ + ..++++|+..++
T Consensus 212 -~~~~-~--~~ls~~el~~~~ 228 (404)
T 3ejb_B 212 -KGRE-K--DKLTEEEAASTC 228 (404)
T ss_dssp -HC-------CCCHHHHHHHH
T ss_pred -hccc-C--CCCCHHHHHHHH
Confidence 4322 2 349999988764
No 49
>4fb2_A P450CIN; heme, monooxygenase, cindoxin, oxidoreductase; HET: HEM EDO; 1.37A {Citrobacter braakii} PDB: 4fmx_A* 4fyz_A* 1t2b_A* 3bdz_A* 3be0_A*
Probab=99.86 E-value=6.8e-21 Score=159.81 Aligned_cols=207 Identities=13% Similarity=0.115 Sum_probs=154.4
Q ss_pred cCCChhHHHHHHHHHh--CCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccccCCCceEeccCChhHH
Q 045977 54 LSSKLPESLQTLARRY--GPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWR 131 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~y--G~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~w~ 131 (311)
+..+++.++.+|+++| |||+++++++ +.++|++|+.+++|+. +...|++++..........++.++++. +|+.|+
T Consensus 17 ~~~~p~~~~~~l~~~Y~~Gpv~~~~~~~-~~~vv~~~~~v~~vl~-~~~~f~~~~~~~~~~~~~~~~~~~~~~-~g~~~~ 93 (398)
T 4fb2_A 17 PDGTPHAFFEALRDEAETTPIGWSEAYG-GHWVVAGYKEIQAVIQ-NTKAFSNKGVTFPRYETGEFELMMAGQ-DDPVHK 93 (398)
T ss_dssp TTSSSHHHHHHHHHHHTTCSEEEECGGG-CEEEECSHHHHHHHHT-CCSSEEGGGCSSSCC----CCCTTTTC-CTTHHH
T ss_pred hhcChhHHHHHHHhcCCCCCeEEecCCC-CEEEEccHHHHHHHHh-ChhhccCCcccccCCCCcccccCcccC-CchHHH
Confidence 4578999999999999 9999999876 5899999999999995 445677766544322222222344444 599999
Q ss_pred HHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchH-HHHHHHHHHHHHHHhccccCccccchH
Q 045977 132 FMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGT-EVTNMTNNLIFRMIMNKKRISENEIEN 210 (311)
Q Consensus 132 ~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~-~~~~~~~~vi~~~~fG~~~~~~~~~~~ 210 (311)
++|++++ ++|+ +..++.+.+.+.++++++++.|... + .+|+.. ....+++++++. +||.+.+.
T Consensus 94 ~~R~~~~-~~f~-~~~l~~~~~~i~~~~~~l~~~l~~~------~-~~d~~~~~~~~~~~~vi~~-~~G~~~~~------ 157 (398)
T 4fb2_A 94 KYRQLVA-KPFS-PEATDLFTEQLRQSTNDLIDARIEL------G-EGDAATWLANEIPARLTAI-LLGLPPED------ 157 (398)
T ss_dssp HHHHHHH-TTTC-HHHHHTTHHHHHHHHHHHHHTTTTT------T-EEEHCCCCCTTHHHHHHHH-HTTSCGGG------
T ss_pred HHHHHHH-HhhC-HHHHHHHHHHHHHHHHHHHHHHhhc------C-CccHHHHHHHHHHHHHHHH-HcCCCHHH------
Confidence 9999999 9999 9999999999999999999988763 3 578654 446899999999 69987753
Q ss_pred HHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHH
Q 045977 211 EAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLE 290 (311)
Q Consensus 211 ~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~ 290 (311)
.+.+.++...+.. | ...++..++.+.+.+++.+.|++++++ ..+|+++.|++
T Consensus 158 -~~~~~~~~~~~~~-----------~--------~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~ 209 (398)
T 4fb2_A 158 -GDTYRRWVWAITH-----------V--------ENPEEGAEIFAELVAHARTLIAERRTN--------PGNDIMSRVIM 209 (398)
T ss_dssp -HHHHHHHHHHHHH-----------C--------CCHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHH
T ss_pred -HHHHHHHHHHHhc-----------C--------CCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHH
Confidence 3344444444332 1 012366778888999999999998864 23699999998
Q ss_pred hccccCCccccCHhhhhhhc
Q 045977 291 TCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 291 ~~~~~~~~~~l~~~ei~~~i 310 (311)
...+ + ..++++++..++
T Consensus 210 ~~~~-~--~~l~~~~i~~~~ 226 (398)
T 4fb2_A 210 SKID-G--ESLSEDDLIGFF 226 (398)
T ss_dssp CCBT-T--BCCCHHHHHHHH
T ss_pred cccC-C--CCCCHHHHHHHH
Confidence 7542 2 359999988764
No 50
>2z36_A MOXA, cytochrome P450 type compactin 3'',4''- hydroxylase; CYP105, oxidoreductase; HET: HEM MES; 2.80A {Nonomuraea recticatena}
Probab=99.85 E-value=2.8e-20 Score=156.65 Aligned_cols=224 Identities=12% Similarity=0.162 Sum_probs=156.9
Q ss_pred CCCCCCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCccc
Q 045977 34 KSYNFPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSK 112 (311)
Q Consensus 34 ~~~~~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~ 112 (311)
+.....|||.. |+- ..+..+|+.++.+|+ +||||+++++ |+.++|+|++|+.+++++.++ .|++++......
T Consensus 4 ~~~~~~~g~~~-~~~---~~~~~~p~~~~~~l~-~~Gpv~~~~~~g~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~ 76 (413)
T 2z36_A 4 NVADELAGLEL-PVE---RGCPFAPPAAYERLR-ERAPINKVRLTSGGQAWWVSGHEEARAVLADG--RFSSDKRKDGFP 76 (413)
T ss_dssp ------CCCEE-CCC---CCBTTBCCHHHHHHH-HHCSEEEEEETTSCEEEEECSHHHHHHHHHCT--TEECCTTSTTCC
T ss_pred cHHHHhccccC-CCC---cccccCchHHHHHHH-HcCCeeEeecCCCceEEEEecHHHHHHHHcCC--CcccCccccCcc
Confidence 34445567663 432 234578999999996 7899999997 788999999999999999864 466665322111
Q ss_pred ------cccc---CCCc-eEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccch
Q 045977 113 ------YNIY---DGSG-FVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLG 182 (311)
Q Consensus 113 ------~~~~---~~~~-l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~ 182 (311)
.... .+.+ +++.+ |+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... . ++++|+.
T Consensus 77 ~~~~~~~~~~~~~~~~~~l~~~~-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~----~-~~~~d~~ 148 (413)
T 2z36_A 77 LFTLDAATLQQLRSQPPLMLGMD-GAEHSAARRPVI-GEFT-VKRLAALRPRIQDIVDHFIDDMLAT----D-QRPVDLV 148 (413)
T ss_dssp CSSCCHHHHHHHTTSCCCGGGCC-HHHHHHHHHHHH-GGGS-HHHHHHHHHHHHHHHHHHHHHHTTC----S-CSSEEHH
T ss_pred ccccccccccccccccccccccC-chHHHHHHHHHH-HhhC-HHHHHHHHHHHHHHHHHHHHHHHHh----c-CCCccHH
Confidence 1110 1356 66665 999999999999 9999 9999999999999999999999742 2 4579998
Q ss_pred HHHH-HHHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHH
Q 045977 183 TEVT-NMTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELL 261 (311)
Q Consensus 183 ~~~~-~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~ 261 (311)
+.+. .+++++++.+ ||.+.+. .+.+...... +.. .. .+ ++..++.+.+.+++
T Consensus 149 ~~~~~~~~~~vi~~~-~G~~~~~-------~~~~~~~~~~----~~~-----------~~--~~--~~~~~~~~~~~~~~ 201 (413)
T 2z36_A 149 QALSLPVPSLVICEL-LGVPYTD-------HDFFQSRTTM----MVS-----------RT--SM--EDRRRAFAELRAYI 201 (413)
T ss_dssp HHTTTHHHHHHHHHH-HTCCGGG-------HHHHHHHHHH----TTC-----------SS--CH--HHHHHHHHHHHHHH
T ss_pred HHHhhhhHHHHHHHH-hCCCHHH-------HHHHHHHHHH----Hhc-----------cc--Cc--HHHHHHHHHHHHHH
Confidence 6654 6999999995 9987753 1223222211 110 00 11 45667778899999
Q ss_pred HHHHHHHHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 262 EKMMTDYEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 262 ~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.++|++++++ ..+|+++.|+++..+ + ..++++++.+++
T Consensus 202 ~~~i~~r~~~--------~~~dll~~ll~~~~~-~--~~ls~~ei~~~~ 239 (413)
T 2z36_A 202 DDLITRKESE--------PGDDLFSRQIARQRQ-E--GTLDHAGLVSLA 239 (413)
T ss_dssp HHHHHHHHSS--------CCSSHHHHHHHHHHH-H--SCCCHHHHHHHH
T ss_pred HHHHHHHHhC--------CCCCHHHHHHHhhcC-C--CCCCHHHHHHHH
Confidence 9999988753 236999999987432 1 349999988765
No 51
>1q5d_A P450 epoxidase; cytochrome P450, epothilone, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM EPB; 1.93A {Sorangium cellulosum} SCOP: a.104.1.1 PDB: 1q5e_A* 1pkf_A*
Probab=99.85 E-value=7.7e-21 Score=160.46 Aligned_cols=214 Identities=13% Similarity=0.118 Sum_probs=157.1
Q ss_pred cCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCC-----CC---cccccccC-CCceEec
Q 045977 54 LSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYE-----PC---PSKYNIYD-GSGFVTG 124 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~-----~~---~~~~~~~~-~~~l~~~ 124 (311)
+..+++..+.++ ++||||++ + ++.++|+|++|+.+++|+.++. |++++. .. ....+... +.++++.
T Consensus 24 ~~~~p~~~~~~l-~~~Gpv~~-~-~~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 98 (419)
T 1q5d_A 24 YAEDPFPAIERL-REATPIFY-W-DEGRSWVLTRYHDVSAVFRDER--FAVSREEWESSAEYSSAIPELSDMKKYGLFGL 98 (419)
T ss_dssp TTTCCHHHHHHH-HHHCSEEE-E-TTTTEEEECSHHHHHHHHTCTT--EECCGGGSTTHHHHHHSSGGGHHHHHHSTTTS
T ss_pred hhhChHHHHHHH-HhhCCccc-c-CCCCEEEEecHHHHHHHHcCCC--ccccccccccccccccccchhhhhcccccccC
Confidence 357899999999 78999999 5 6778999999999999998664 777751 11 11122110 2456666
Q ss_pred cCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHH-HHHHHHHHHHHHHhccccC
Q 045977 125 PYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTE-VTNMTNNLIFRMIMNKKRI 203 (311)
Q Consensus 125 ~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~ 203 (311)
+ |+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... | ++|+.+. +..+++++++.+ ||.+.+
T Consensus 99 ~-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~------~-~~d~~~~~~~~~~~~vi~~~-fG~~~~ 167 (419)
T 1q5d_A 99 P-PEDHARVRKLVN-PSFT-SRAIDLLRAEIQRTVDQLLDARSGQ------E-EFDVVRDYAEGIPMRAISAL-LKVPAE 167 (419)
T ss_dssp C-HHHHHHHHHHHG-GGGS-HHHHGGGHHHHHHHHHHHHHHHTTS------S-CEETTTTTGGGSHHHHHHHH-TTCCGG
T ss_pred C-chHHHHHHHHHH-HhcC-HHHHHHHHHHHHHHHHHHHHHHHhc------C-CCCHHHHHHHHHHHHHHHHH-hCCCHH
Confidence 5 999999999999 9999 9999999999999999999999763 4 7898864 589999999998 999876
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC-
Q 045977 204 SENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDG- 282 (311)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~- 282 (311)
. .+.+......+..... ...+|+. .+..++..++..++.+++.++|++++++ . .+
T Consensus 168 ~-------~~~~~~~~~~~~~~~~----~~~~P~~-----~~~~~~~~~~~~~~~~~~~~~i~~r~~~------~--~~~ 223 (419)
T 1q5d_A 168 C-------DEKFRRFGSATARALG----VGLVPRV-----DEETKTLVASVTEGLALLHGVLDERRRN------P--LEN 223 (419)
T ss_dssp G-------HHHHHHHHHHHHHHTT----TTTSSCC-----CSCHHHHHHHHHHHHHHHHHHHHHHHHS------C--CSS
T ss_pred H-------HHHHHHHHHHHHHhcc----cccccCC-----hHHHHHHHHHHHHHHHHHHHHHHHHHhC------C--CCC
Confidence 3 2234444444444322 1123322 1223567778889999999999998864 1 24
Q ss_pred CHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 283 DLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 283 dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
|+++.|++... ++ ..++++|+.+++
T Consensus 224 dll~~ll~~~~-~~--~~l~~~ei~~~~ 248 (419)
T 1q5d_A 224 DVLTMLLQAEA-DG--SRLSTKELVALV 248 (419)
T ss_dssp CHHHHHHHHHH-SS--TTCCHHHHHHHH
T ss_pred CHHHHHHhhhc-cC--CCCCHHHHHHHH
Confidence 99999998743 22 359999988765
No 52
>2xkr_A CYP142, putative cytochrome P450 142; oxidoreductase; HET: HEM; 1.60A {Mycobacterium tuberculosis}
Probab=99.85 E-value=3.2e-20 Score=155.75 Aligned_cols=207 Identities=12% Similarity=0.128 Sum_probs=154.2
Q ss_pred CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccccCCCceEeccCChhHHHHH
Q 045977 55 SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMK 134 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~w~~~R 134 (311)
..+++.++.++++ |||||++. .++|+|++|+.+++|+.++. .|++++... .... .+.++++.+ |+.|+++|
T Consensus 17 ~~~p~~~~~~l~~-~Gpv~~~~---~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~-~~~~--~~~~l~~~~-g~~h~~~R 87 (398)
T 2xkr_A 17 SREARAAYRWMRA-NQPVFRDR---NGLAAASTYQAVIDAERQPE-LFSNAGGIR-PDQP--ALPMMIDMD-DPAHLLRR 87 (398)
T ss_dssp CTTHHHHHHHHHH-HCSEEECT---TCCEEECSHHHHHHHHTCTT-TEESTTCSS-TTSC--CCSSGGGCC-TTHHHHHH
T ss_pred ccChhHHHHHHHh-cCCeeecC---CCeEEEecHHHHHHHHhCcc-cccCccccC-Cccc--ccccccccC-chHHHHHH
Confidence 4678999999977 99999764 37999999999999997654 577765432 2122 234666665 99999999
Q ss_pred HHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccch-HHHHHHHHHHHHHHHhccccCccccchHHHH
Q 045977 135 HLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLG-TEVTNMTNNLIFRMIMNKKRISENEIENEAK 213 (311)
Q Consensus 135 ~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 213 (311)
++++ ++|+ +..++.+.+.+.+.++++++.|... | .+|+. +.+..+++++++.+ ||.+.+. .+
T Consensus 88 ~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------~-~~d~~~~~~~~~~~~vi~~~-fG~~~~~-------~~ 150 (398)
T 2xkr_A 88 KLVN-AGFT-RKRVKDKEASIAALCDTLIDAVCER------G-ECDFVRDLAAPLPMAVIGDM-LGVRPEQ-------RD 150 (398)
T ss_dssp HHHG-GGSC-HHHHHTTHHHHHHHHHHHHHTTTTT------S-EEEHHHHTTTHHHHHHHHHH-HTCCGGG-------HH
T ss_pred HHhh-hhhC-HHHHHHHHHHHHHHHHHHHHhhhhc------C-CccHHHHHHHHHHHHHHHHH-hCCCHHH-------HH
Confidence 9999 9999 9999999999999999999998763 4 68998 55568999999998 9998763 23
Q ss_pred HHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhcc
Q 045977 214 MMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLETCR 293 (311)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~ 293 (311)
.+......+..... |. ++ +...++..++.+.+.+++.++|++++++ . .+|+++.|++...
T Consensus 151 ~~~~~~~~~~~~~~--------~~--~~--p~~~~~~~~~~~~~~~~~~~~i~~r~~~------~--~~dll~~ll~~~~ 210 (398)
T 2xkr_A 151 MFLRWSDDLVTFLS--------SH--VS--QEDFQITMDAFAAYNDFTRATIAARRAD------P--TDDLVSVLVSSEV 210 (398)
T ss_dssp HHHHHHHHHHHHHT--------SC--CC--HHHHHHHHHHHHHHHHHHHHHHHHHHHS------C--CSSHHHHHHHCCB
T ss_pred HHHHHHHHHHhccC--------cc--cc--hhhHHHHHHHHHHHHHHHHHHHHHHHhC------C--CCCHHHHHHHhhc
Confidence 34444444443221 11 11 1234566778888999999999998863 1 3799999998754
Q ss_pred ccCCccccCHhhhhhhc
Q 045977 294 DENSEVTLTRNQIKYFV 310 (311)
Q Consensus 294 ~~~~~~~l~~~ei~~~i 310 (311)
+ +..++++|+.+++
T Consensus 211 ~---~~~ls~~ei~~~~ 224 (398)
T 2xkr_A 211 D---GERLSDDELVMET 224 (398)
T ss_dssp T---TBCCCHHHHHHHH
T ss_pred c---CCCCCHHHHHHHH
Confidence 2 2459999988765
No 53
>2dkk_A Cytochrome P450; CYP158A1, INHI oxidoreductase; HET: HEM; 1.97A {Streptomyces coelicolor} PDB: 2nz5_A* 2nza_A*
Probab=99.85 E-value=1.4e-20 Score=158.31 Aligned_cols=206 Identities=11% Similarity=0.122 Sum_probs=151.3
Q ss_pred CCChhHHHHHHHHHhCCceEEeecC--eeEEEEcCHHHHHHHHHhCCcccCCCCCCC----cccccccC-CCceEeccCC
Q 045977 55 SSKLPESLQTLARRYGPLMQIRIGP--STYVVVSNATVAKEIFTTHDLDFASRYEPC----PSKYNIYD-GSGFVTGPYG 127 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~~~~~~~--~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~----~~~~~~~~-~~~l~~~~~g 127 (311)
+.+++.++.+++ +||||+++++++ .+.++|++|+.+++|+.+. .|.+++... ....+.+. +.++++.+ |
T Consensus 26 g~~p~~~~~~l~-~~Gpv~~~~~~~g~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 101 (411)
T 2dkk_A 26 GPEFDPVLAELM-REGPLTRVRLPHGEGWAWLATRYDDVKAITNDP--RFGRAEVTQRQITRLAPHFKPRPGSLAFAD-Q 101 (411)
T ss_dssp SSCCCHHHHHHH-TTCSEEEEECSBSBSCEEEECSHHHHHHHTTCT--TEESGGGGGSCBCBSSSCCCCCTTCSTTCC-T
T ss_pred cccccHHHHHHH-hcCCeEeeecCCCceeEEEEcCHHHHHHHHcCC--CcccCCCCCCCccccccchhccccccccCC-c
Confidence 466779998886 899999998754 6799999999999999753 466554321 11112111 34666654 9
Q ss_pred hhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHH-HHHHHHHHHHHhccccCccc
Q 045977 128 AYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVT-NMTNNLIFRMIMNKKRISEN 206 (311)
Q Consensus 128 ~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~-~~~~~vi~~~~fG~~~~~~~ 206 (311)
+.|+++|++++ ++|+ +++++.+.+.+.+.++++++.|... |.++|+.+.+. .+++++++. +||.+++.
T Consensus 102 ~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------g~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-- 170 (411)
T 2dkk_A 102 PDHNRLRRAVA-GAFT-VGATKRLRPRAQEILDGLVDGILAE------GPPADLVERVLEPFPIAVVSE-VMGVPAAD-- 170 (411)
T ss_dssp THHHHHHHHHG-GGSS-HHHHHHHHHHHHHHHHHHHHHHHHH------CSCEEHHHHTTTHHHHHHHHH-HHTCCSSH--
T ss_pred hHHHHHHHHhh-HhhC-HHHHHHHHHHHHHHHHHHHHHHHhc------CCCeehHHHHHHHHHHHHHHH-HhCCCHHH--
Confidence 99999999999 9999 9999999999999999999999876 66799997775 699999998 59998762
Q ss_pred cchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHH
Q 045977 207 EIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMG 286 (311)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~ 286 (311)
.+.+..+.. .+.. ..+ ..++..++.+.+.+++.++|++++++ ..+|+++
T Consensus 171 -----~~~~~~~~~----~~~~-----~~~---------~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~dll~ 219 (411)
T 2dkk_A 171 -----RERVHSWTR----QIIS-----TSG---------GAEAAERAKRGLYGWITETVRARAGS--------EGGDVYS 219 (411)
T ss_dssp -----HHHHHHHHG----GGCS-----SCS---------CSHHHHHHHHHHHHHHHHHHHTTTTC--------CSSCHHH
T ss_pred -----HHHHHHHHH----HHHh-----ccc---------hHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHH
Confidence 222322221 1110 111 13556678888999999999887753 2369999
Q ss_pred HHHHhccccCCccccCHhhhhhhc
Q 045977 287 ILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 287 ~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.|++. .+ + ..++++|+.+++
T Consensus 220 ~ll~~-~~-~--~~ls~~el~~~~ 239 (411)
T 2dkk_A 220 MLGAA-VG-R--GEVGETEAVGLA 239 (411)
T ss_dssp HHHHH-HH-T--TSSCTTSHHHHH
T ss_pred HHHHh-cC-C--CCCCHHHHHHHH
Confidence 99987 32 2 358999988765
No 54
>3lxh_A Cytochrome P450; heme, iron, metal-binding, monooxygena oxidoreductase; HET: HEM; 2.20A {Novosphingobium aromaticivorans} SCOP: a.104.1.0 PDB: 3lxi_A*
Probab=99.85 E-value=2.3e-20 Score=157.76 Aligned_cols=212 Identities=14% Similarity=0.129 Sum_probs=152.9
Q ss_pred CCChhHHHHHHHHHhC-CceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccccCCCceEeccCChhHHHH
Q 045977 55 SSKLPESLQTLARRYG-PLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFM 133 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~w~~~ 133 (311)
..+++.++.++++++| ||+++..++ +.++|++|+.+++|+.+ ...|++++...........+.++++.+ |+.|+++
T Consensus 37 ~~dp~~~~~~lr~~~G~pv~~~~~~~-~~~vv~~~~~v~~vl~~-~~~f~~~~~~~~~~~~~~~~~~~~~~d-g~~h~~~ 113 (421)
T 3lxh_A 37 EQGFHEAWKRVQQPDTPPLVWTPFTG-GHWIATRGTLIDEIYRS-PERFSSRVIWVPREAGEAYDMVPTKLD-PPEHTPY 113 (421)
T ss_dssp GGCHHHHHHHHCCTTCCSEEEESSTT-SEEEECSHHHHHHHHTC-TTTEETTCCSSSHHHHHHCCCTTTTCC-TTTHHHH
T ss_pred hcChhHHHHHHHhcCCCCeEeccCCC-CeEEEcCHHHHHHHHcC-hhhccCCcccCCcccccccccCCccCC-cHHHHHH
Confidence 4589999999976655 899998766 48999999999999954 456777663222111111223555555 9999999
Q ss_pred HHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCccccchHHH
Q 045977 134 KHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRISENEIENEA 212 (311)
Q Consensus 134 R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~ 212 (311)
|++++ ++|+ +..++.+.+.+.+.++++++.|... + .+|+...+ ..++.++++. +||.+.+. .
T Consensus 114 R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------~-~~d~~~~~~~~~~~~v~~~-~~G~~~~~-------~ 176 (421)
T 3lxh_A 114 RKAID-KGLN-LAEIRKLEDQIRTIAVEIIEGFADR------G-HCEFGSEFSTVFPVRVFLA-LAGLPVED-------A 176 (421)
T ss_dssp HHHHH-HHHS-HHHHHTTHHHHHHHHHHHHHTTTTT------S-EEEHHHHTTTTHHHHHHHH-HHTCCGGG-------H
T ss_pred HHHHh-hhcC-HHHHHHHHHHHHHHHHHHHHHHhhc------C-CeehHHHHHHHHHHHHHHH-HcCCCHHH-------H
Confidence 99999 9999 9999999999999999999998763 3 67875554 6688888877 48987753 3
Q ss_pred HHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhc
Q 045977 213 KMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLETC 292 (311)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~ 292 (311)
..+.++...+.... ..+| ....++..++.+++.+++.+.|++++++ ..+|+++.|+++.
T Consensus 177 ~~~~~~~~~~~~~~------~~~p-------~~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~dll~~ll~~~ 235 (421)
T 3lxh_A 177 TKLGLLANEMTRPS------GNTP-------EEQGRSLEAANKGFFEYVAPIIAARRGG--------SGTDLITRILNVE 235 (421)
T ss_dssp HHHHHHHHHHHSCC------CSSH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTC--------CCCSHHHHHHTSC
T ss_pred HHHHHHHHHHhccc------cCCC-------chhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHhhh
Confidence 34444444433211 1122 1224677788889999999999988854 3479999999875
Q ss_pred cccCCccccCHhhhhhhc
Q 045977 293 RDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 293 ~~~~~~~~l~~~ei~~~i 310 (311)
.+ + ..++++|+.+++
T Consensus 236 ~~-~--~~l~~~ei~~~~ 250 (421)
T 3lxh_A 236 ID-G--KPMPDDRALGLV 250 (421)
T ss_dssp BT-T--BCCCHHHHHHHH
T ss_pred cc-C--CCCCHHHHHHHH
Confidence 42 2 359999998765
No 55
>2uuq_A CYP130, cytochrome P450 130; iron, heme, monooxygenase, metal-binding, oxidoreductase, hypothetical protein; HET: HEM; 1.46A {Mycobacterium tuberculosis} PDB: 2uvn_A* 2whf_A* 2wh8_A* 2wgy_A*
Probab=99.84 E-value=5e-20 Score=155.15 Aligned_cols=209 Identities=12% Similarity=0.061 Sum_probs=151.7
Q ss_pred CCChhHHHHHHHHHhCCce-----EEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCC-ccc--cc-c-cCCCceEec
Q 045977 55 SSKLPESLQTLARRYGPLM-----QIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPC-PSK--YN-I-YDGSGFVTG 124 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~-----~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~~--~~-~-~~~~~l~~~ 124 (311)
..+++.++.++ ++||||+ ++++ .++|+|++|+.+++|+.++ ..|++++... ... .+ . ..+.++++.
T Consensus 24 ~~~p~~~~~~l-~~~Gpv~~~~~~~~~~--~~~vvv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~l~~~ 99 (414)
T 2uuq_A 24 WPNPWPMYRAL-RDHDPVHHVVPPQRPE--YDYYVLSRHADVWSAARDH-QTFSSAQGLTVNYGELEMIGLHDTPPMVMQ 99 (414)
T ss_dssp TTCCHHHHHHH-HHHCSEEEECCTTCGG--GCEEEECSHHHHHHHHHCT-TTEESTTCSSSCTTHHHHHTCSSSCCGGGC
T ss_pred ccCchHHHHHH-HhcCCEEcccccccCC--CCEEEEcCHHHHHHHHcCc-hhccCCCCcccccCcccccccccccccccC
Confidence 36789999988 5799999 8766 5799999999999999876 5577776432 121 22 1 223577777
Q ss_pred cCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccch-HHHHHHHHHHHHHHHhccccC
Q 045977 125 PYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLG-TEVTNMTNNLIFRMIMNKKRI 203 (311)
Q Consensus 125 ~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG~~~~ 203 (311)
+ |+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... | .+|+. +.+..+++++++. +||.+++
T Consensus 100 ~-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~------~-~vdl~~~~~~~~~~~vi~~-~~G~~~~ 168 (414)
T 2uuq_A 100 D-PPVHTEFRKLVS-RGFT-PRQVETVEPTVRKFVVERLEKLRAN------G-GGDIVTELFKPLPSMVVAH-YLGVPEE 168 (414)
T ss_dssp C-TTHHHHHHHHHH-TTSS-HHHHHHHHHHHHHHHHHHHHHHHHT------T-EEEHHHHTTTHHHHHHHHH-HTTCCGG
T ss_pred C-chhHHHHHHHhh-hhcC-HHHHHHHHHHHHHHHHHHHHHHHhc------C-CccHHHHHHHHhHHHHHHH-HhCCCHH
Confidence 5 999999999999 9999 9999999999999999999999874 4 58997 5667999999999 6999876
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcccCcchhh-cccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 045977 204 SENEIENEAKMMRKLVVEMMGLAAKLGVSKVF-SFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDG 282 (311)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 282 (311)
. .+.+......+... ..+ |.. ++..++.+++.+++.++|++++++ ..+
T Consensus 169 ~-------~~~~~~~~~~~~~~-------~~~~p~~---------~~~~~~~~~~~~~~~~~i~~r~~~--------~~~ 217 (414)
T 2uuq_A 169 D-------WTQFDGWTQAIVAA-------NAVDGAT---------TGALDAVGSMMAYFTGLIERRRTE--------PAD 217 (414)
T ss_dssp G-------HHHHHHHHHHHHHH-------HHC--------------CCHHHHHHHHHHHHHHHHHHTTS--------CCS
T ss_pred H-------HHHHHHHHHHHHhh-------cccCCch---------hHHHHHHHHHHHHHHHHHHHHHhC--------CCC
Confidence 3 12333333333321 012 210 123456678889999999888753 236
Q ss_pred CHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 283 DLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 283 dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
|+++.|++.... +++..++++|+.+++
T Consensus 218 dll~~ll~~~~~-~~~~~ls~~ei~~~~ 244 (414)
T 2uuq_A 218 DAISHLVAAGVG-ADGDTAGTLSILAFT 244 (414)
T ss_dssp SHHHHHHHTTTT-CTTCHHHHHHHHHHH
T ss_pred CHHHHHHhcccc-cCCCCCCHHHHHHHH
Confidence 999999987431 122458999988765
No 56
>2xbk_A PIMD protein; epoxidation, oxidoreductase; HET: HEM XBK; 1.95A {Streptomyces natalensis} PDB: 2x9p_A*
Probab=99.84 E-value=9.7e-20 Score=152.75 Aligned_cols=201 Identities=14% Similarity=0.202 Sum_probs=149.2
Q ss_pred cCCChhHHHHHHHHHhCCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccCCCCCCC-cccccccCCCc--eEeccCC--
Q 045977 54 LSSKLPESLQTLARRYGPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFASRYEPC-PSKYNIYDGSG--FVTGPYG-- 127 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~-~~~~~~~~~~~--l~~~~~g-- 127 (311)
+..+++.++.++ ++||||+++++ ++.+.|+|++|+++++|+.++ .|.+++... ....... +.+ +++.+ |
T Consensus 24 ~~~~p~~~~~~l-~~yGpv~~~~~~~~~~~vvv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~-~~~~~l~~~~-g~~ 98 (404)
T 2xbk_A 24 KMLKLSPLLRAL-QDRGPIHRVRTPAGDEAWLVTRHAELKQLLHDE--RIGRTHPDPPSAAQYVR-SPFLDLLISD-ADA 98 (404)
T ss_dssp BTTBCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHTTCT--TEESBCSSGGGSCCSSC-CHHHHTTCBC-SCH
T ss_pred cccCccHHHHHH-HhhCCEeeeccCCCceEEEEcCHHHHHHHHcCC--CCCCCccccccCCcccc-cccccceeeC-CCC
Confidence 346789999999 89999999997 789999999999999999864 365654332 1112112 235 66665 9
Q ss_pred ----hhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhcccc
Q 045977 128 ----AYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKR 202 (311)
Q Consensus 128 ----~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~ 202 (311)
+.|+++|++++ ++|+ +.+++.+.+.+.++++++++.|... |.++|+.+.+ ..+++++++. +||.+.
T Consensus 99 ~~~~~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~------g~~~d~~~~~~~~~~~~vi~~-~~G~~~ 169 (404)
T 2xbk_A 99 ESGRRQHAETRRLLT-PLFS-ARRVLEMQPKVEEAADTLLDAFIAQ------GPPGDLHGELTVPFALTVLCE-VIGVPP 169 (404)
T ss_dssp HHHHHHHHHHHHHHG-GGGC-HHHHHHHHHHHHHHHHHHHHHHHHT------CSSEEHHHHTHHHHHHHHHHH-HHTCCG
T ss_pred CCCCchHHHHHHHhh-hhcC-HHHHHHHHHHHHHHHHHHHHHHHhc------CCCeeHHHHHHHHHHHHHHHH-HhCCCH
Confidence 99999999999 9999 9999999999999999999999864 6689998765 5799999997 699887
Q ss_pred CccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCC
Q 045977 203 ISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDG 282 (311)
Q Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~ 282 (311)
+. .+.+......+.. . .. .+ +..++.+.+.+++.++|++++++. .+
T Consensus 170 ~~-------~~~~~~~~~~~~~----~----~~--------~p---~~~~~~~~~~~~~~~~i~~r~~~~--------~~ 215 (404)
T 2xbk_A 170 QR-------RAELTTLLAGIAK----L----DD--------RE---GAVRAQDDLFGYVAGLVEHKRAEP--------GP 215 (404)
T ss_dssp GG-------HHHHHHHHHHHTB----S----SC--------HH---HHHHHHHHHHHHHHHHHHHHHHSC--------CS
T ss_pred HH-------HHHHHHHHHHHHh----c----cC--------cH---HHHHHHHHHHHHHHHHHHHHHhCC--------CC
Confidence 52 2233333322211 0 00 11 456677888999999999888642 25
Q ss_pred CHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 283 DLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 283 dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
|+++.| + + + .++++|+..++
T Consensus 216 dll~~l-~---~-~---~ls~~ei~~~~ 235 (404)
T 2xbk_A 216 DIISRL-N---D-G---ELTEDRVAHLA 235 (404)
T ss_dssp SHHHHH-H---S-S---SCCHHHHHHHH
T ss_pred CHHHHh-h---c-C---CCCHHHHHHHH
Confidence 899988 2 1 1 49999988764
No 57
>2z3t_A Cytochrome P450; monoxygenase, oxydoreductase, heme-enzyme, oxidoreductase; HET: HEM; 1.90A {Streptomyces SP} PDB: 2z3u_A* 3a1l_A*
Probab=99.84 E-value=3.6e-20 Score=156.53 Aligned_cols=213 Identities=11% Similarity=0.053 Sum_probs=150.3
Q ss_pred CCChhHHHHHHHHHhCCceEEeec--CeeEEEEcCHHHHHHHHHhCCcccCCCCCC--------C-cccc----c-ccCC
Q 045977 55 SSKLPESLQTLARRYGPLMQIRIG--PSTYVVVSNATVAKEIFTTHDLDFASRYEP--------C-PSKY----N-IYDG 118 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~~~~~~--~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~--------~-~~~~----~-~~~~ 118 (311)
..+++.++.+++ +||||+++++| +.++|+|++|+.+++|+.++ .|++++.. . .... . ...+
T Consensus 19 ~~~p~~~~~~l~-~~Gpv~~~~~g~~~~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 95 (425)
T 2z3t_A 19 IADPYPVYRRYR-EAAPVHRTASGPGKPDTYYVFTYDDVVRVLSNR--RLGRNARVASGDTDTAPVPIPTEHRALRTVVE 95 (425)
T ss_dssp HHCCHHHHHHHH-HHCSEEEECCCSSCCCEEEECSHHHHHHHHHCT--TEESSCCCC---------------CHHHHHHT
T ss_pred hcChHHHHHHHH-hcCCeEeccccCCCCCeEEEcCHHHHHHHHcCC--Cccccccccccccccccccccccccccccccc
Confidence 357888999985 59999999987 67899999999999999865 57776531 1 1100 0 1112
Q ss_pred CceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHH-HHHHHHHHHHHHH
Q 045977 119 SGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTE-VTNMTNNLIFRMI 197 (311)
Q Consensus 119 ~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~ 197 (311)
.++++.+ |+.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... | ++|+.+. ...+++++++.+
T Consensus 96 ~~l~~~d-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~------g-~~dl~~~~~~~~~~~vi~~~- 164 (425)
T 2z3t_A 96 NWLVFLD-PPHHTELRSLLT-TEFS-PSIVTGLRPRIAELASALLDRLRAQ------R-RPDLVEGFAAPLPILVISAL- 164 (425)
T ss_dssp TCGGGCC-HHHHHHHHHHHH-GGGS-HHHHHHHHHHHHHHHHHHHHHHTTS------S-SCBHHHHTTTHHHHHHHHHH-
T ss_pred cccccCC-chHHHHHHHHHH-HhhC-HHHHHHHHHHHHHHHHHHHHHHHhc------C-CccHHHHHHHHHHHHHHHHH-
Confidence 4677765 999999999999 9999 9999999999999999999999764 5 7899875 578999999998
Q ss_pred hccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCC
Q 045977 198 MNKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQ 277 (311)
Q Consensus 198 fG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 277 (311)
||.+.+. .+.+......+.... ..+| ++ ....++..++.+.+.+++.+.|++++++
T Consensus 165 ~G~~~~~-------~~~~~~~~~~~~~~~------~~~~----~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~------ 220 (425)
T 2z3t_A 165 LGIPEED-------HTWLRANAVALQEAS------TTRA----RD-GRGYARAEAASQEFTRYFRREVDRRGGD------ 220 (425)
T ss_dssp HTCCGGG-------HHHHHHHHHHHHTTC------TTCC----C----HHHHHHHHHHHHHHHHHHHHCC----------
T ss_pred hCCCHHH-------HHHHHHHHHHHHhhc------cccC----CC-HHHHHHHHHHHHHHHHHHHHHHHHHHhC------
Confidence 9988763 223444333332211 1112 11 1224566778888999999999887753
Q ss_pred CCCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 278 ENDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 278 ~~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
..+|+++.|++...+ + ..++++|+.+++
T Consensus 221 --~~~dll~~ll~~~~~-~--~~ls~~el~~~~ 248 (425)
T 2z3t_A 221 --DRDDLLTLLVRARDT-G--SPLSVDGIVGTC 248 (425)
T ss_dssp -----CHHHHHHHHHHT-T--CCCCHHHHHHHH
T ss_pred --CCCCHHHHHHHhhcc-C--CCCCHHHHHHHH
Confidence 236999999987432 2 459999988765
No 58
>3r9b_A Cytochrome P450 164A2; monooxygenase, oxidoreductase; HET: HEM D12; 1.89A {Mycobacterium smegmatis} PDB: 3r9c_A*
Probab=99.84 E-value=1.4e-20 Score=158.98 Aligned_cols=215 Identities=16% Similarity=0.160 Sum_probs=152.8
Q ss_pred cCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccc--------cCCCceEecc
Q 045977 54 LSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNI--------YDGSGFVTGP 125 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~--------~~~~~l~~~~ 125 (311)
+..+|+.++.++ ++||||+++++| +++|++|+.+++|+.+. ..+++++......... ..+.++++.+
T Consensus 27 ~~~~p~~~~~~l-r~~gpv~~~~~g---~~vv~~~~~v~~vl~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d 101 (418)
T 3r9b_A 27 TRADPYPIYDRI-RRGGPLALPEAN---LAVFSSFSDCDDVLRHP-SSCSDRTKSTIFQRQLAAETQPRPQGPASFLFLD 101 (418)
T ss_dssp GTTCCHHHHHHH-HHHCCEEEGGGT---EEEECSHHHHHHHHHCT-TEECCGGGCHHHHHHHC---------CCCGGGCC
T ss_pred hccCchHHHHHH-HhcCCEEECCCC---eEEEecHHHHHHHHcCc-ccccCcccccccccccccccccccccccchhhcC
Confidence 368899999988 688999998765 89999999999999764 3344444322111111 1234666666
Q ss_pred CChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHH-HHHHHHHHHHHHHhccccCc
Q 045977 126 YGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTE-VTNMTNNLIFRMIMNKKRIS 204 (311)
Q Consensus 126 ~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~ 204 (311)
|+.|+++|++++ ++|+ +.+++.+.+.+.++++++++ +.. ++.+|+... ...+++++++. +||.+.+.
T Consensus 102 -g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~-l~~-------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 169 (418)
T 3r9b_A 102 -PPDHTRLRGLVS-KAFA-PRVIKRLEPEITALVDQLLD-AVD-------GPEFNLIDNLAYPLPVAVICR-LLGVPIED 169 (418)
T ss_dssp -TTHHHHHHHHHH-GGGS-HHHHGGGHHHHHHHHHHHHH-TCC-------SSEEEHHHHTTTHHHHHHHHH-HHTCCGGG
T ss_pred -CchHHHHHHHhh-hhhC-HHHHHHHHHHHHHHHHHHHh-hhc-------cCCeehHHHHhCcCCHHHHHH-HcCCCHHH
Confidence 999999999999 9999 99999999999999999999 754 337897655 46899999999 79998863
Q ss_pred cccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCH
Q 045977 205 ENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDL 284 (311)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dl 284 (311)
...+......+..... ..+++.+++ ....++..++.+.+.+++.++|++++++ ..+|+
T Consensus 170 -------~~~~~~~~~~~~~~~~------~~~~~~~~~-~~~~~~~~~~~~~l~~~~~~~i~~r~~~--------~~~d~ 227 (418)
T 3r9b_A 170 -------EPKFSRASALLAAALD------PFLALTGET-SDLFDEQMKAGMWLRDYLRALIDERRRT--------PGEDL 227 (418)
T ss_dssp -------HHHHHHHHHHHHHTTS------CHHHHHSSC-CTTHHHHHHHHHHHHHHHHHHHHHTTTS--------CCSSH
T ss_pred -------HHHHHHHHHHHHhhcC------ccccccccC-HHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCccH
Confidence 2234444433332221 111111111 2335677788889999999999988753 24799
Q ss_pred HHHHHHhccccCCccccCHhhhhhhc
Q 045977 285 MGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 285 l~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
++.|++...+ + ..++++|+.+++
T Consensus 228 l~~ll~~~~~-~--~~ls~~ei~~~~ 250 (418)
T 3r9b_A 228 MSGLVAVEES-G--DQLTEDEIIATC 250 (418)
T ss_dssp HHHHHHHHHH-S--SSCCHHHHHHHH
T ss_pred HHHHHHhhhc-c--CCCCHHHHHHHH
Confidence 9999987332 2 349999998765
No 59
>3dsk_A Cytochrome P450 74A, chloroplast; P450 fold, fatty acid biosynthesis, heme, iron, synthesis, lyase, metal-binding, oxylipin biosynthesis; HET: HEM T25; 1.55A {Arabidopsis thaliana} PDB: 2rcm_A* 3dsj_A* 3dsi_A* 2rcl_A* 2rch_A* 3cli_A*
Probab=99.84 E-value=1.9e-21 Score=168.04 Aligned_cols=165 Identities=14% Similarity=0.141 Sum_probs=124.6
Q ss_pred CCCCCCCCCCCCCCeecccccc-----CCChhHHHHHHHHHhCC-ceEEeecCeeE-------EEEcCHHHHHHHHHhCC
Q 045977 33 TKSYNFPPSPPALPIIGHSYLL-----SSKLPESLQTLARRYGP-LMQIRIGPSTY-------VVVSNATVAKEIFTTHD 99 (311)
Q Consensus 33 ~~~~~~ppgp~~~p~~G~~~~~-----~~~~~~~~~~~~~~yG~-v~~~~~~~~~~-------v~v~~p~~i~~i~~~~~ 99 (311)
..+.+.||||+++|++|+++++ ..+++.++.+++++||+ ||++++++.++ +++++++..+.++....
T Consensus 24 ~~p~~~pPGp~g~P~iG~~~~~~~~~~~~~~~~f~~~~~~kyG~~Vf~~~l~~~~~vv~~p~~v~~~~~~~~~~l~~~~~ 103 (495)
T 3dsk_A 24 DLPIRNIPGNYGLPIVGPIKDRWDYFYDQGAEEFFKSRIRKYNSTVYRVNMPPGAFIAENPQVVALLDGKSFPVLFDVDK 103 (495)
T ss_dssp CCCBCCCCCCCCSTTHHHHHHHHHHHTTSCHHHHHHHHHHHHTCSEEEEECSCCTTTCSCCEEEEECSTTTGGGGGCTTT
T ss_pred CCCCCCCCCCCCCCccchHHHHHHHHHhcCcHHHHHHHHHHhCCceEeecCCCCCCccCCCCEEEEeCCcceeeeccccc
Confidence 3567889999999999999776 57899999999999999 99999988777 66677776665554321
Q ss_pred ----cccCCCCCCCcccccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCC
Q 045977 100 ----LDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEG 175 (311)
Q Consensus 100 ----~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~ 175 (311)
..+..... .....+++.+...+...+|+.|+++|+++. ++|+ ... +.+.+.+.+.+.++++.|... ..+
T Consensus 104 v~k~~~~~~~~~-~~~~l~g~~~~~~~~~~~g~~h~~~R~~~~-~~f~-~~~-~~~~~~i~~~~~~ll~~~~~~--~~~- 176 (495)
T 3dsk_A 104 VEKKDLLTGTYM-PSTELTGGYRILSYLDPSEPKHEKLKNLLF-FLLK-SSR-NRIFPEFQATYSELFDSLEKE--LSL- 176 (495)
T ss_dssp EECSSCTTSSSC-CCGGGGTTCCCGGGCCTTSHHHHHHHHHHH-HHHH-HTT-TTHHHHHHHHHHHHHHHHHHH--HHH-
T ss_pred ccccccccccCC-CCccccCCCcceeeeCCCchHHHHHHHHHH-HHHH-HHH-HHHHHHHHHHHHHHHHHHHHH--hcc-
Confidence 11111111 112222222122233335999999999999 9999 754 889999999999999999764 223
Q ss_pred CCCccchHHHHHHHHHHHHHHHhccccCc
Q 045977 176 GPPCNLGTEVTNMTNNLIFRMIMNKKRIS 204 (311)
Q Consensus 176 ~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 204 (311)
++++|+.+.+..+++++++.++||.+++.
T Consensus 177 ~~~vdl~~~~~~~~~~~i~~~~~G~~~~~ 205 (495)
T 3dsk_A 177 KGKADFGGSSDGTAFNFLARAFYGTNPAD 205 (495)
T ss_dssp HSSEESHHHHHHHHHHHHHHHHHSCCGGG
T ss_pred CCCccHHHHHHHHHHHHHHHHHcCCCcch
Confidence 55899999999999999999999998875
No 60
>3nc3_A Cytochrome P450 CYPX; cytochrome P450 oxidase, HAEM protein, oxidoreductase; HET: HEM; 2.66A {Bacillus subtilis} PDB: 3nc5_A* 3nc6_A* 3nc7_A*
Probab=99.84 E-value=2.4e-20 Score=158.32 Aligned_cols=211 Identities=11% Similarity=0.111 Sum_probs=142.9
Q ss_pred CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccccCCCceEeccCChhHHHHH
Q 045977 55 SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMK 134 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~w~~~R 134 (311)
..+|+.++.++ ++||||+++..++ .++|++|+.+++|+.++.. |++++.........+. .++++.+ |+.|+++|
T Consensus 52 ~~~p~~~~~~l-r~~gpv~~~~~~~--~~vv~~~~~v~~vl~~~~~-f~~~~~~~~~~~~~~~-~~l~~~d-g~~h~~~R 125 (441)
T 3nc3_A 52 QNNPYAYFSQL-REEDPVHYEESID--SYFISRYHDVRYILQHPDI-FTTKSLVERAEPVMRG-PVLAQMH-GKEHSAKR 125 (441)
T ss_dssp HHCGGGTHHHH-HHHCSEEEETTTT--EEEECCHHHHHHHHHCTTT-EECCCTTSCCCCSCC---------------CCH
T ss_pred hcChHHHHHHH-HhcCCEEEeCCCC--EEEEcCHHHHHHHhcCccc-ccccccccccccccCC-CccccCC-cHHHHHHH
Confidence 45788888777 7899999987665 8999999999999987654 7776654433333332 2566665 99999999
Q ss_pred HHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccch-HHHHHHHHHHHHHHHhccccCccccchHHHH
Q 045977 135 HLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLG-TEVTNMTNNLIFRMIMNKKRISENEIENEAK 213 (311)
Q Consensus 135 ~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~-~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~ 213 (311)
++++ ++|+ +..++.+.+.+.+.++++++.|.. ++.+|+. +....+++++++. +||.+.+. .+
T Consensus 126 r~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~-------~~~~dl~~~~~~~~~~~vi~~-l~G~~~~~-------~~ 188 (441)
T 3nc3_A 126 RIVV-RSFI-GDALDHLSPLIKQNAENLLAPYLE-------RGKSDLVNDFGKTFAVCVTMD-MLGLDKRD-------HE 188 (441)
T ss_dssp HHHH-HHHH-HTHHHHHHHHHHHHHHHHHTTTTT-------TTEEECCCCCHHHHHHHHHHH-HTTCCGGG-------HH
T ss_pred HHHH-hhcC-HHHHHHHHHHHHHHHHHHHHHHHh-------cCCCcHHHHHHHHHHHHHHHH-HcCCCHHH-------HH
Confidence 9999 9999 999999999999999999998865 3368874 5556799999999 58987753 33
Q ss_pred HHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhcc
Q 045977 214 MMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLETCR 293 (311)
Q Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~ 293 (311)
.+..+...+......... + ....++..++.+++.+++.++|++++++ ..+|+++.|++...
T Consensus 189 ~~~~~~~~~~~~~~~~~~----~-------~~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~Dll~~Ll~~~~ 249 (441)
T 3nc3_A 189 KISEWHSGVADFITSISQ----S-------PEARAHSLWCSEQLSQYLMPVIKERRVN--------PGSDLISILCTSEY 249 (441)
T ss_dssp HHHHHHHHHHHHHHCSCC----C-------HHHHHHHHHHHHHHHHHHHHHHHHHTTS--------CCSSHHHHHCC---
T ss_pred HHHHHHHHHHHhcccccC----C-------hHHHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhhc
Confidence 455555555443321100 0 1123556677888999999999988753 23699999998743
Q ss_pred ccCCccccCHhhhhhhc
Q 045977 294 DENSEVTLTRNQIKYFV 310 (311)
Q Consensus 294 ~~~~~~~l~~~ei~~~i 310 (311)
+ + ..++++|+.+++
T Consensus 250 ~-~--~~ls~~el~~~~ 263 (441)
T 3nc3_A 250 E-G--MALSDKDILALI 263 (441)
T ss_dssp ------CCCHHHHHHHH
T ss_pred c-C--CCCCHHHHHHHH
Confidence 2 2 459999998765
No 61
>1gwi_A CYP154C1, cytochrome P450 154C1; oxidoreductase, macrolide antibiotics, 12- and 14- carbon macrolactone monooxygenase, heme; HET: HEM; 1.92A {Streptomyces coelicolor} SCOP: a.104.1.1
Probab=99.84 E-value=4.8e-20 Score=155.17 Aligned_cols=209 Identities=16% Similarity=0.204 Sum_probs=153.4
Q ss_pred ccCCChhHHHHHHHHHhCCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccCCCC-CCCcc-----c---cccc--C-CC
Q 045977 53 LLSSKLPESLQTLARRYGPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFASRY-EPCPS-----K---YNIY--D-GS 119 (311)
Q Consensus 53 ~~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~-~~~~~-----~---~~~~--~-~~ 119 (311)
.+..+++..+.++ ++||||+++++ ++.++|+|++|+++++|+.++. +++++ .+... . .+.+ . +.
T Consensus 14 ~~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (411)
T 1gwi_A 14 PFVTDLDGESARL-RAAGPLAAVELPGGVPVWAVTHHAEAKALLTDPR--LVKDINVWGAWRRGEIPADWPLIGLANPGR 90 (411)
T ss_dssp TTCSCHHHHHHHH-HHTCSEEEEEETTTEEEEEECSHHHHHHHHTCTT--EECCGGGCHHHHTTCSCTTCTTHHHHSCCS
T ss_pred cccCChHHHHHHH-HHhCCeeeeecCCCccEEEEeCHHHHHHHHcCCc--cccCcccccccccccCCcccchhhhhcccc
Confidence 3457899999999 99999999997 8899999999999999998654 34433 11100 0 0000 1 24
Q ss_pred ceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHH-HHHHHHHHHHHh
Q 045977 120 GFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVT-NMTNNLIFRMIM 198 (311)
Q Consensus 120 ~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~-~~~~~vi~~~~f 198 (311)
++++.+ |+.|+++|++++ ++|+ +.+++.+.+.+.++++++++.|... ++++|+.+.+. .+++++++. +|
T Consensus 91 ~l~~~~-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------~~~~d~~~~~~~~~~~~vi~~-~~ 160 (411)
T 1gwi_A 91 SMLTVD-GAEHRRLRTLVA-QALT-VRRVEHMRGRITELTDRLLDELPAD------GGVVDLKAAFAYPLPMYVVAD-LM 160 (411)
T ss_dssp SGGGCC-HHHHHHHHHHHT-TTSC-HHHHHTTHHHHHHHHHHHHHTSCCS------CCCEEHHHHTTTHHHHHHHHH-HH
T ss_pred ccccCC-cHHHHHHHHHHH-HhcC-HHHHHHHHHHHHHHHHHHHHHHHHc------CCCcchHHHHhhHHHHHHHHH-Hh
Confidence 666654 999999999999 9999 9999999999999999999988632 55899998876 599999996 69
Q ss_pred ccccCccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCC
Q 045977 199 NKKRISENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQE 278 (311)
Q Consensus 199 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 278 (311)
|.+.+. .+.+......+.... . . .++..++.+.+.+++.++|++++++ .
T Consensus 161 G~~~~~-------~~~~~~~~~~~~~~~--------------~--~--~~~~~~~~~~~~~~~~~~i~~r~~~------~ 209 (411)
T 1gwi_A 161 GIEEAR-------LPRLKVLFEKFFSTQ--------------T--P--PEEVVATLTELASIMTDTVAAKRAA------P 209 (411)
T ss_dssp TCCGGG-------HHHHHHHHHHHHCTT--------------S--C--HHHHHHHHHHHHHHHHHHHHHHHHS------C
T ss_pred CCCHHH-------HHHHHHHHHHHhccC--------------C--C--hHHHHHHHHHHHHHHHHHHHHHHhC------C
Confidence 987752 233444433332100 0 1 2456677788999999999988864 1
Q ss_pred CCCCCHHHHHHHhccccCCccccCHhhhhhhc
Q 045977 279 NDDGDLMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 279 ~~~~dll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.+|+++.|+++..+ +..++++|+.+++
T Consensus 210 --~~d~l~~ll~~~~~---~~~l~~~~i~~~~ 236 (411)
T 1gwi_A 210 --GDDLTSALIQASEN---GDHLTDAEIVSTL 236 (411)
T ss_dssp --CSSHHHHHHHCCBT---TBCCCHHHHHHHH
T ss_pred --CCCHHHHHHHhccc---CCCCCHHHHHHHH
Confidence 26999999987532 2459999988765
No 62
>3b98_A Prostaglandin I2 synthase; prostacyclin synthase, cytochrome P450 8A1, CYP8A1, isomerase; HET: HEM; 2.08A {Danio rerio} PDB: 3b99_A*
Probab=99.83 E-value=2.7e-21 Score=166.23 Aligned_cols=157 Identities=10% Similarity=0.089 Sum_probs=116.2
Q ss_pred CCCCCCCCCCC-CCeeccccccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCC-Ccc
Q 045977 34 KSYNFPPSPPA-LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEP-CPS 111 (311)
Q Consensus 34 ~~~~~ppgp~~-~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~-~~~ 111 (311)
++.+.||||++ +|++||++.+..+++.++.+++++|||||++++++.++++|++|+++++++.++.. ++.++.. ...
T Consensus 15 ~~~~~pPgp~~~~P~iG~~~~~~~~~~~~~~~l~~~yG~v~~~~~g~~~~vvv~~~~~~~~il~~~~~-~~~~~~~~~~~ 93 (475)
T 3b98_A 15 RRRNEPPLDKGMIPWLGHALEFGKDAAKFLTRMKEKHGDIFTVRAAGLYITVLLDSNCYDAVLSDVAS-LDQTSYAQVLM 93 (475)
T ss_dssp CCTTCCCEECCSSTTTBTHHHHHHCHHHHHHHHHHHHCSEEEEEETTEEEEEECCTTTHHHHHTCTTT-EESHHHHHHHH
T ss_pred cCCCCCCCCCCCcchHHhHHHHhhCHHHHHHHHHHHhCCeEEEEECCceEEEEeCHHHHHHHHcCccc-CCchHHHHHHH
Confidence 55678999998 99999999887789999999999999999999999999999999999999976542 3222211 111
Q ss_pred cccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccc-cCCCCCccchHHHHHHHH
Q 045977 112 KYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYS-EEGGPPCNLGTEVTNMTN 190 (311)
Q Consensus 112 ~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~d~~~~~~~~~~ 190 (311)
....+ .++++.+ |+.| |+++. ++|+ +..++.+.+.+.+++..+++.+... . ..+...+++...+..+++
T Consensus 94 ~~~~g--~~~~~~~-~~~~---R~~~~-~~f~-~~~l~~~~~~~~~~~~~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~ 163 (475)
T 3b98_A 94 KRIFN--MILPSHN-PESE---KKRAE-MHFQ-GASLTQLSNSMQNNLRLLMTPSEMG--LKTSEWKKDGLFNLCYSLLF 163 (475)
T ss_dssp HHTTC--CCCTTCC-HHHH---HHHHH-HHTS-HHHHHHHHHHHHHHHHHHSSTTTTT--CSSCSCEEEEHHHHHHHHHH
T ss_pred HHHhC--CCCCCCC-hHHH---HHHHH-HHcC-hhhHHHHHHHHHHHHHHHHhhcccc--cCCCCceeehHHHHHHHHHH
Confidence 11222 3444443 6655 67777 8999 9999999999999998888776543 1 110224577777888888
Q ss_pred HHHHHHHhccc
Q 045977 191 NLIFRMIMNKK 201 (311)
Q Consensus 191 ~vi~~~~fG~~ 201 (311)
++++...||.+
T Consensus 164 ~~~~~~~~g~~ 174 (475)
T 3b98_A 164 KTGYLTVFGAE 174 (475)
T ss_dssp HHHHHHHHCCT
T ss_pred HHhhhheeCCc
Confidence 88888788854
No 63
>3oft_A Cytochrome P450, CYP101C1; oxidoreductase; HET: HEM; 1.90A {Novosphingobium aromaticivorans} PDB: 3ofu_A*
Probab=99.83 E-value=1e-19 Score=152.59 Aligned_cols=206 Identities=12% Similarity=0.120 Sum_probs=150.7
Q ss_pred cCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccccCCCceEeccCChhHHHH
Q 045977 54 LSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFM 133 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~w~~~ 133 (311)
+..+++.++.+++++ |||+++..++ +.++|++|+.+++++.+. ..|++++...........+.++++. +|+.|+++
T Consensus 22 ~~~~p~~~~~~l~~~-Gpv~~~~~~~-~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~-~g~~h~~~ 97 (396)
T 3oft_A 22 VEQDYFAAWKTLLDG-PGLVWSTANG-GHWIAARGDVVRELWGDA-ERLSSQCLAVTPGLGKVMQFIPLQQ-DGAEHKAF 97 (396)
T ss_dssp TTTCHHHHHHGGGGS-CSEEEECSTT-SEEEECSHHHHHHHHHCT-TTEESTTCCSSTTHHHHHCCTTTTC-CHHHHHHH
T ss_pred hhcChHHHHHHHHhc-CCeeeecCCC-CEEEEcCHHHHHHHHcCc-ccccCCcccCCCccccccccCcccc-CCcHHHHH
Confidence 357899999999888 9999998874 488899999999999754 4677766322111111122344555 49999999
Q ss_pred HHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCccccchHHH
Q 045977 134 KHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRISENEIENEA 212 (311)
Q Consensus 134 R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~ 212 (311)
|++++ ++|+ +..++.+.+.+.+.++++++.|... + .+|+...+ ..++.++++. +||.+.+. .
T Consensus 98 R~~~~-~~f~-~~~l~~~~~~i~~~~~~l~~~l~~~------~-~~d~~~~~~~~~~~~v~~~-~~G~~~~~-------~ 160 (396)
T 3oft_A 98 RTPVM-KGLA-SRFVVALEPKVQAVARKLMESLRPR------G-SCDFVSDFAEILPLNIFLT-LIDVPLED-------R 160 (396)
T ss_dssp HHHHH-HHTC-HHHHHHHHHHHHHHHHHHHHHHGGG------S-EEEHHHHTTTTHHHHHHHH-HTTCCGGG-------H
T ss_pred HHHhh-hhhC-HHHHHHHHHHHHHHHHHHHHHhhhc------C-CccHHHHHHHHHHHHHHHH-HcCCCHHH-------H
Confidence 99999 9999 9999999999999999999999864 4 57876555 5677777776 58977653 3
Q ss_pred HHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhc
Q 045977 213 KMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLETC 292 (311)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~ 292 (311)
..+......+... ...++..++.+.+.+++.+.|++++++ ..+|+++.|++..
T Consensus 161 ~~~~~~~~~~~~~-------------------~~~~~~~~~~~~~~~~~~~~i~~r~~~--------~~~d~l~~ll~~~ 213 (396)
T 3oft_A 161 PRLRQLGVQLTRP-------------------DGSMTVEQLKQAADDYLWPFIEKRMAQ--------PGDDLFSRILSEP 213 (396)
T ss_dssp HHHHHHHHHHHSC-------------------CSSCCHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHHHTSC
T ss_pred HHHHHHHHHHhCC-------------------CCHHHHHHHHHHHHHHHHHHHHHHHhC--------CCCCHHHHHHHhh
Confidence 3344443333210 012456677788999999999998865 2379999999874
Q ss_pred cccCCccccCHhhhhhhc
Q 045977 293 RDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 293 ~~~~~~~~l~~~ei~~~i 310 (311)
.+ + ..++++|+.+++
T Consensus 214 ~~-~--~~l~~~el~~~~ 228 (396)
T 3oft_A 214 VG-G--RPWTVDEARRMC 228 (396)
T ss_dssp BT-T--BCCCHHHHHHHH
T ss_pred cc-C--CCCCHHHHHHHH
Confidence 42 2 459999988764
No 64
>3mgx_A Putative P450 monooxygenase; cytochrome P450 oxidase, HAEM protein, vancomycin biosynthes carrier protein, oxidoreductase; HET: HEM; 2.10A {Amycolatopsis balhimycina}
Probab=99.82 E-value=1e-19 Score=153.18 Aligned_cols=206 Identities=13% Similarity=0.150 Sum_probs=149.0
Q ss_pred CCChhHHHHHHHHHhCCceEEeecC--eeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccc---cccC-CCceEeccCCh
Q 045977 55 SSKLPESLQTLARRYGPLMQIRIGP--STYVVVSNATVAKEIFTTHDLDFASRYEPCPSKY---NIYD-GSGFVTGPYGA 128 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~~~~~~~--~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~---~~~~-~~~l~~~~~g~ 128 (311)
..+|+..+.++++ ||||+++...| .++++|++++.+++++.+. ..|++++....... .... +.++++.+ |+
T Consensus 36 ~~dp~~~~~~lr~-~gpV~~~~~~g~~~~~~vv~~~~~v~~vl~~~-~~fs~~~~~~~~~~~~~~~~~~~~~l~~~d-g~ 112 (415)
T 3mgx_A 36 TLERHARWRELAA-EDAMVWSDPGSSPSGFWSVFSHRACAAVLAPS-APLTSEYGMMIGFDRDHPDNSGGRMMVVSE-HE 112 (415)
T ss_dssp STTHHHHHHHHHH-HTCCEEECSSSSSSCEEEECSHHHHHHHSCTT-SSEECTTCSSTTCCSSSCCTTTTTSGGGCC-HH
T ss_pred cCChhHHHHHHHh-cCCEeeccCCCCcCCEEEEecHHHHHHHHhCh-hhhcCCccccccccccccccccCCCccccC-cH
Confidence 3589999999965 99999997445 7899999999999999644 45766654322211 1111 34566655 99
Q ss_pred hHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCcccc
Q 045977 129 YWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRISENE 207 (311)
Q Consensus 129 ~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~ 207 (311)
.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... + .+|+.+.+ ..+++++++. +||.+.+
T Consensus 113 ~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~~------~-~~dl~~~~~~~~~~~vi~~-l~G~~~~---- 178 (415)
T 3mgx_A 113 QHRKLRKLVG-PLLS-RAAARKLAERVRIEVGDVLGRVLDG------E-VCDAATAIGPRIPAAVVCE-ILGVPAE---- 178 (415)
T ss_dssp HHHHHHHHHG-GGSS-HHHHHHSHHHHHHHHHHHTTTSSSS------S-CEESTTTTTTHHHHHHHHH-HHTCCGG----
T ss_pred HHHHHHHHhH-hhhC-HHHHHHHHHHHHHHHHHHHHHHHhc------C-CcchHHHHHHHHHHHHHHH-HcCCCHH----
Confidence 9999999999 9999 9999999999999999999988653 4 68999877 6799999998 5897654
Q ss_pred chHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 045977 208 IENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGI 287 (311)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ 287 (311)
+...+.+....+..... ..+.| ....++.+++.+++.++|++++++. .+|+++.
T Consensus 179 ---~~~~~~~~~~~~~~~~~----~~~~~-----------~~~~~~~~~l~~~~~~~i~~rr~~~--------~~dll~~ 232 (415)
T 3mgx_A 179 ---DEDMLIDLTNHAFGGED----ELFDG-----------MTPRQAHTEILVYFDELITARRKEP--------GDDLVST 232 (415)
T ss_dssp ---GHHHHHHHHHHHTSCCC--------C-----------CCHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHH
T ss_pred ---HHHHHHHHHHHHHcccC----cccch-----------HHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHH
Confidence 23344444444332111 01111 1123567888999999999988642 3699999
Q ss_pred HHHhccccCCccccCHhhhhhhc
Q 045977 288 LLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 288 ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
|++.. .++++|+..++
T Consensus 233 ll~~~-------~ls~~el~~~~ 248 (415)
T 3mgx_A 233 LVTDD-------DLTIDDVLLNC 248 (415)
T ss_dssp HHHCT-------TSCHHHHHHHH
T ss_pred HHhCC-------CCCHHHHHHHH
Confidence 99874 28999988765
No 65
>3buj_A CALO2; heme, iron, metal-binding, monooxygenase, oxidoreducta binding protein; HET: HEM; 2.47A {Micromonospora echinospora}
Probab=99.82 E-value=1e-19 Score=152.60 Aligned_cols=207 Identities=12% Similarity=0.129 Sum_probs=149.4
Q ss_pred CChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcc------cccccC-CCceEeccCCh
Q 045977 56 SKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPS------KYNIYD-GSGFVTGPYGA 128 (311)
Q Consensus 56 ~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~------~~~~~~-~~~l~~~~~g~ 128 (311)
.+++.++.++ ++||||++ + |.+.++|++|+.+++|+.+. .|.+++..... ....+. +.++++.+ |+
T Consensus 13 ~~p~~~~~~l-~~yGpv~~-~--g~~~~vv~~~~~v~~vl~~~--~f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~-g~ 85 (397)
T 3buj_A 13 RDPYPSYHWL-LRHDPVHR-G--AHRVWYVSRFADVRAVLGDE--RFARTGIRRFWTDLVGPGLLAEIVGDIILFQD-EP 85 (397)
T ss_dssp HCCHHHHHHH-HHHCSEEE-C--GGGCEEECSHHHHHHHHTCT--TEESHHHHHHHHHHHCSSHHHHHHTTCGGGCC-TT
T ss_pred cCchHHHHHH-HhcCCeee-C--CCCeEEEcCHHHHHHHHcCC--CcccCcccccccccccccccccccccccccCC-ch
Confidence 4678888777 68999999 6 57899999999999999752 46554321100 011110 34677665 99
Q ss_pred hHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchH-HHHHHHHHHHHHHHhccccCcccc
Q 045977 129 YWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGT-EVTNMTNNLIFRMIMNKKRISENE 207 (311)
Q Consensus 129 ~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~-~~~~~~~~vi~~~~fG~~~~~~~~ 207 (311)
.|+++|++++ ++|+ +..++.+.+.+.++++++++.|... + ++|+.+ ....+++++++.+ ||.+.+.
T Consensus 86 ~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------~-~~dl~~~~~~~~~~~vi~~~-~G~~~~~--- 152 (397)
T 3buj_A 86 DHGRLRGVVG-PAFS-PSALRRLEPVIAGTVDDLLRPALAR------G-AMDVVDELAYPLALRAVLGL-LGLPAAD--- 152 (397)
T ss_dssp HHHHHHHHHG-GGSS-TTTTGGGHHHHHHHHHHHHHHHHTT------T-EEEHHHHTHHHHHHHHHHHH-HTCCGGG---
T ss_pred hHHHHHHHHH-HhcC-HHHHHHHHHHHHHHHHHHHHHHhhc------C-CeehHHHHHHHhHHHHHHHH-hCCCHHH---
Confidence 9999999999 9999 9999999999999999999999863 3 789875 4578999999998 9998763
Q ss_pred chHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 045977 208 IENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGI 287 (311)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ 287 (311)
.+.+......+..... + .++ ....++..++.+++.+++.+.|++++++. .+|+++.
T Consensus 153 ----~~~~~~~~~~~~~~~~---------~--~~~-~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ 208 (397)
T 3buj_A 153 ----WGAVGRWSRDVGRTLD---------R--GAS-AEDMRRGHAAIAEFADYVERALARRRREG--------GEDLLAL 208 (397)
T ss_dssp ----HHHHHHHHHHHHGGGC---------S--SCC-HHHHHHHHHHHHHHHHHHHHHHHHHHHHC--------CCSHHHH
T ss_pred ----HHHHHHHHHHHHhhcC---------C--CCC-hHHHHHHHHHHHHHHHHHHHHHHHHHcCC--------CCCHHHH
Confidence 2234444433332111 1 011 12345667788889999999999988752 2699999
Q ss_pred HHHhccccCCccccCHhhhhhhc
Q 045977 288 LLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 288 ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
|+++.. ++ . ++++|+.+++
T Consensus 209 ll~~~~-~~--~-ls~~ei~~~~ 227 (397)
T 3buj_A 209 MLDAHD-RG--L-MSRNEIVSTV 227 (397)
T ss_dssp HHHHHH-TT--S-SCHHHHHHHH
T ss_pred HHHhhh-cC--C-CCHHHHHHHH
Confidence 998742 22 3 9999988765
No 66
>3dan_A Cytochrome P450 74A2; AOS heme cytochrome P450 structure, fatty acid biosynthesis, heme, iron, lipid synthesis, lyase, metal-binding; HET: HEM; 1.80A {Parthenium argentatum} PDB: 3dam_A* 3dbm_A*
Probab=99.81 E-value=8.8e-20 Score=156.69 Aligned_cols=164 Identities=12% Similarity=0.106 Sum_probs=121.2
Q ss_pred CCCCCCCCCCCCCCeecccccc-----CC-ChhHHHHHHHHHhCC-ceEEeecC-------eeEEEEcCHHHHHHHHHh-
Q 045977 33 TKSYNFPPSPPALPIIGHSYLL-----SS-KLPESLQTLARRYGP-LMQIRIGP-------STYVVVSNATVAKEIFTT- 97 (311)
Q Consensus 33 ~~~~~~ppgp~~~p~~G~~~~~-----~~-~~~~~~~~~~~~yG~-v~~~~~~~-------~~~v~v~~p~~i~~i~~~- 97 (311)
..+.+.||||+++|++|++..+ .. +++.++.+++++||+ ||++++++ ...|++++++..+.++..
T Consensus 5 ~~Pl~~iPGp~g~P~iG~~~~~~~~~~~~g~~~~~~~~~~~kyG~~vf~~~~~~~~~v~~~~~~v~~~~~~~~~~~~~~~ 84 (473)
T 3dan_A 5 SKPLREIPGSYGIPFFQPIKDRLEYFYGTGGRDEYFRSRMQKYQSTVFRANMPPGPFVSSNPKVIVLLDAKSFPILFDVS 84 (473)
T ss_dssp GSCBCCCCCCCCSTTHHHHHHHHHHHHSTTHHHHHHHHHHHHHTCSEEEEECTTCTTTCSCCEEEEECSTTTGGGGGCTT
T ss_pred CCCCCCCCCCCCCcchhhHHHHHHHHHhhcCchHHHHhHHHHhCCeEEEecCCCCCccccCCceEEeecccccceecCCc
Confidence 3677889999999999999875 45 789999999999999 99999863 345555666555444431
Q ss_pred ---CCcccCCCCCCCcccccccC-CCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhcccc
Q 045977 98 ---HDLDFASRYEPCPSKYNIYD-GSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSE 173 (311)
Q Consensus 98 ---~~~~~~~~~~~~~~~~~~~~-~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~ 173 (311)
+...+..... ......++. ..+++.. +|+.|+++|+++. ++|+ + .++.+.+.+.+.++++++.|... ..
T Consensus 85 ~~~~~~~~~~~~~-~~~~~~g~~~~~~~~~~-~~~~h~~~R~~~~-~~f~-~-~~~~~~~~i~~~~~~ll~~~~~~--~~ 157 (473)
T 3dan_A 85 KVEKKDLFTGTYM-PSTKLTGGYRVLSYLDP-SEPRHAQLKNLLF-FMLK-N-SSNRVIPQFETTYTELFEGLEAE--LA 157 (473)
T ss_dssp TEECSSCTTSSSC-CCGGGGTTSCCGGGCCT-TSHHHHHHHHHHH-HHHH-H-HHHHHHHHHHHHHHHHHHHHHHH--HH
T ss_pred ceecccccccccc-CCccccCCCcceeeeCC-CcHHHHHHHHHHH-HHHH-H-HHHHHHHHHHHHHHHHHHHHHHH--hc
Confidence 1111111111 111222221 1233444 5999999999999 9999 8 48999999999999999999864 32
Q ss_pred CCCCCccchHHHHHHHHHHHHHHHhccccCc
Q 045977 174 EGGPPCNLGTEVTNMTNNLIFRMIMNKKRIS 204 (311)
Q Consensus 174 ~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~ 204 (311)
+ ++++|+.+.+..+++++++.++||.+++.
T Consensus 158 ~-~~~vdl~~~~~~~~~~~i~~~~~G~~~~~ 187 (473)
T 3dan_A 158 K-NGKAAFNDVGEQAAFRFLGRAYFNSNPEE 187 (473)
T ss_dssp H-HSCEECHHHHHHHHHHHHHHHHHSCCGGG
T ss_pred c-CCcccHHHHHHHHHHHHHHHHHcCCCCCc
Confidence 3 45899999999999999999999998875
No 67
>1lfk_A OXYB, P450 monooxygenase; oxidative phenol coupling reaction P450 vancomycin, oxidoreductase; HET: HEM; 1.70A {Amycolatopsis orientalis} SCOP: a.104.1.1 PDB: 1lg9_A* 1lgf_A*
Probab=99.81 E-value=1.9e-19 Score=150.98 Aligned_cols=198 Identities=15% Similarity=0.195 Sum_probs=141.3
Q ss_pred HHHHHHHhCCceEEeec-Ce---eEEEEcCHHHHHHHHHhCCcccCCCCCC---------CcccccccCCCceEeccCCh
Q 045977 62 LQTLARRYGPLMQIRIG-PS---TYVVVSNATVAKEIFTTHDLDFASRYEP---------CPSKYNIYDGSGFVTGPYGA 128 (311)
Q Consensus 62 ~~~~~~~yG~v~~~~~~-~~---~~v~v~~p~~i~~i~~~~~~~~~~~~~~---------~~~~~~~~~~~~l~~~~~g~ 128 (311)
+.+|+++ |||++++++ |. ++|+|++|+.+++++.++. .|++++.. ....... .+.++++.+ |+
T Consensus 19 ~~~l~~~-Gpv~~~~~~~g~~~~~~vvv~~~~~v~~vl~~~~-~f~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~-g~ 94 (398)
T 1lfk_A 19 ADELLAA-GALTRVTIGSGADAETHWMATAHAVVRQVMGDHQ-QFSTRRRWDPRDEIGGKGIFRPRE-LVGNLMDYD-PP 94 (398)
T ss_dssp CHHHHTS-CSEEEEC------CCCEEEECSHHHHHHHHHCTT-TEEECTTCCC-------------C-CTTCGGGCC-TT
T ss_pred hHHHHhc-CCccccccCCCCcccceEEEecHHHHHHHHhhCc-ccccccccccccccCCcccccccc-cccCccccC-CH
Confidence 3447665 999999875 45 8999999999999993232 36555431 1111111 234677665 99
Q ss_pred hHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHH-HHHHHHHHHHhccccCcccc
Q 045977 129 YWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTN-MTNNLIFRMIMNKKRISENE 207 (311)
Q Consensus 129 ~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~-~~~~vi~~~~fG~~~~~~~~ 207 (311)
.|+++|++++ ++|+ +.+++.+.+.+.++++++++.|... |+++|+.+.+.. ++.++++. +||.+++.
T Consensus 95 ~~~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~l~~~l~~~------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~--- 162 (398)
T 1lfk_A 95 EHTRLRRKLT-PGFT-LRKMQRMAPYIEQIVNDRLDEMERA------GSPADLIAFVADKVPGAVLCE-LVGVPRDD--- 162 (398)
T ss_dssp HHHHHHHHHG-GGGC-HHHHHHHHHHHHHHHHHHHHHHHHH------CSSEEHHHHTTTTHHHHHHHH-HHTCCGGG---
T ss_pred HHHHHHHHHH-hhhC-HHHHHHHHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHHHHHHHHH-HcCCCHHH---
Confidence 9999999999 9999 9999999999999999999999865 668999999887 99999998 59998753
Q ss_pred chHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHH
Q 045977 208 IENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGI 287 (311)
Q Consensus 208 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ 287 (311)
.+.+......+. . . .+..++..++.+.+.+++.+.|++++++. .+|+++.
T Consensus 163 ----~~~~~~~~~~~~----~-----~---------~~~~~~~~~~~~~~~~~~~~~i~~r~~~~--------~~dll~~ 212 (398)
T 1lfk_A 163 ----RDMFMKLCHGHL----D-----A---------SLSQKRRAALGDKFSRYLLAMIARERKEP--------GEGMIGA 212 (398)
T ss_dssp ----HHHHHHHHHHTT----C-----T---------TSCHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHH
T ss_pred ----HHHHHHHHHHHH----h-----c---------ccchHHHHHHHHHHHHHHHHHHHHHHhCC--------CCCHHHH
Confidence 223333322211 0 0 11235667788889999999999988642 3699999
Q ss_pred HHHhccccCCccccCHhhhhhhc
Q 045977 288 LLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 288 ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
|++.. + ..++++|+.+++
T Consensus 213 ll~~~-~----~~l~~~el~~~~ 230 (398)
T 1lfk_A 213 VVAEY-G----DDATDEELRGFC 230 (398)
T ss_dssp HHHHH-G----GGSCHHHHHHHH
T ss_pred HHHhc-C----CCCCHHHHHHHH
Confidence 99874 2 248999988764
No 68
>3rwl_A Cytochrome P450 alkane hydroxylase 1 CYP153A7; P450 monooxygenase, oxidoreductase; HET: HEM; 2.00A {Sphingopyxis macrogoltabida}
Probab=99.80 E-value=2.5e-18 Score=145.21 Aligned_cols=212 Identities=11% Similarity=0.118 Sum_probs=148.3
Q ss_pred CCChhHHHHHHHHHhCCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccCCCCC---CCccc------ccccCCCceEec
Q 045977 55 SSKLPESLQTLARRYGPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFASRYE---PCPSK------YNIYDGSGFVTG 124 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~---~~~~~------~~~~~~~~l~~~ 124 (311)
..+|+.++.+++++ |||+++.. ++.++++|++++.+++++.+.. .|++++. ..... .....+.++++.
T Consensus 37 ~~~p~~~~~~lr~~-gpv~~~~~~~~~~~~vvt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 114 (426)
T 3rwl_A 37 NDSVGEYFKRLRKD-DPVHYCADSAFGPYWSITKYNDIMHVDTNHD-IFSSDAGYGGIIIDDGIQKGGDGGLDLPNFIAM 114 (426)
T ss_dssp TTCHHHHHHHHHHH-CSEEEESCCTTCSEEEECSHHHHHHHHHCTT-TEECCGGGTCSSSSCCC-------CCCCCGGGC
T ss_pred cCCccHHHHHHHhc-CCeeeccCCCCCCEEEEcCHHHHHHHHcCCc-ccccccccCCCCcccccccccccccccCccccc
Confidence 46799999999765 99999987 4567999999999999998653 4555431 11111 011122355555
Q ss_pred cCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccC
Q 045977 125 PYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRI 203 (311)
Q Consensus 125 ~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~ 203 (311)
+ |+.|+++|++++ ++|+ +..++.+.+.+.+.++++++.|.. ++++|+...+ ..++.++++. +||.+.+
T Consensus 115 d-g~~h~~~R~~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l~~-------~~~~dl~~~~~~~~~~~vi~~-l~G~~~~ 183 (426)
T 3rwl_A 115 D-RPRHDEQRKAVS-PIVA-PANLAALEGTIRERVSKTLDGLPV-------GEEFDWVDRVSIEITTQMLAT-LFDFPFE 183 (426)
T ss_dssp C-TTHHHHHHHHHG-GGGC-HHHHHHHHHHHHHHHHHHHHTSCS-------SSCEEHHHHTHHHHHHHHHHH-HHTCCGG
T ss_pred C-chHHHHHHHHhh-hhhC-HHHHHHHHHHHHHHHHHHHHHhhc-------CCCcchHHHHHHHHHHHHHHH-HcCCCHH
Confidence 5 999999999999 9999 999999999999999999998843 5579977766 6788888886 7998765
Q ss_pred ccccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCC
Q 045977 204 SENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGD 283 (311)
Q Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d 283 (311)
. .+.+..+.+. +... +.... ....++...+..++.+++.++|+++++ .+..+|
T Consensus 184 ~-------~~~~~~~~~~----~~~~------~~~~~---~~~~~~~~~~~~~~~~~~~~~i~~r~~-------~~~~~d 236 (426)
T 3rwl_A 184 E-------RRKLTRWSDV----TTAA------PGGGV---VESWDQRKTELLECAAYFQVLWNERVN-------KDPGND 236 (426)
T ss_dssp G-------THHHHHHHHH----HTCC------TTSSS---CSSHHHHHHHHHHHHHHHHHHHHHHHT-------SCCCSS
T ss_pred H-------HHHHHHHHHH----HHhc------cCccc---cccHHHHHHHHHHHHHHHHHHHHHHhh-------cCCCCC
Confidence 3 1223332211 1110 10000 122355666778899999999998843 244579
Q ss_pred HHHHHHHhccccCCccccCHhhhhhhc
Q 045977 284 LMGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 284 ll~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
+++.|++...+++ ++++|+.+++
T Consensus 237 ll~~ll~~~~~~~----ls~~el~~~~ 259 (426)
T 3rwl_A 237 LISMLAHSPATRN----MTPEEYLGNV 259 (426)
T ss_dssp HHHHHHHCGGGGG----CCHHHHHHHH
T ss_pred HHHHHHhcccCCC----CCHHHHHHHH
Confidence 9999998754433 8999988765
No 69
>1n40_A P450 MT2, cytochrome P450 121; heme binding, oxygen binding, P450 fold, structural genomics, PSI, protein structure initiative; HET: HEM; 1.06A {Mycobacterium tuberculosis} SCOP: a.104.1.1 PDB: 1n4g_A* 2ij5_A* 2ij7_A* 3g5f_A* 3g5h_A* 3cy0_A* 3cy1_A* 3cxv_A* 3cxx_A* 3cxz_A* 3cxy_A*
Probab=99.79 E-value=8e-19 Score=147.02 Aligned_cols=205 Identities=13% Similarity=0.145 Sum_probs=144.9
Q ss_pred cCCChhHHHHHHHHHhCCceEEee-cCeeEEEEcCHHHHHHHHHhCCcccC-C-CCCC--Cccc--cccc-CCCceEecc
Q 045977 54 LSSKLPESLQTLARRYGPLMQIRI-GPSTYVVVSNATVAKEIFTTHDLDFA-S-RYEP--CPSK--YNIY-DGSGFVTGP 125 (311)
Q Consensus 54 ~~~~~~~~~~~~~~~yG~v~~~~~-~~~~~v~v~~p~~i~~i~~~~~~~~~-~-~~~~--~~~~--~~~~-~~~~l~~~~ 125 (311)
+..+++..+.+| ++|||||++++ ++.+.|+|++|+++++++.++. |. + ++.. .... .+.. .+.++++.
T Consensus 14 ~~~~p~~~~~~l-~~yGpv~~~~~~g~~~~vvv~~~~~v~~vl~~~~--f~~~~~~~~~~~~~~~~~~~~~~~~~l~~~- 89 (396)
T 1n40_A 14 RGDRIPDAVAEL-RTREPIRKVRTITGAEAWLVSSYALCTQVLEDRR--FSMKETAAAGAPRLNALTVPPEVVNNMGNI- 89 (396)
T ss_dssp CSSSCCHHHHHH-HHHCSEEEEECTTSCEEEEECSHHHHHHHHTCTT--EESGGGGSTTCCCSSCCSSCGGGGGHHHHH-
T ss_pred cccCccHHHHHH-HHhCCeeEeecCCCceEEEEecHHHHHHHHhCCC--cccccCccccccccccccCCchhhhhhhhH-
Confidence 456889999999 99999999997 7889999999999999998653 55 4 4321 1111 1111 12456554
Q ss_pred CChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCc
Q 045977 126 YGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRIS 204 (311)
Q Consensus 126 ~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~ 204 (311)
.|+++|++++ ++|+ +. ++.+.+.+.+++.++++.|... ++++|+.+.+ ..+++++++. +||.+++.
T Consensus 90 ---~h~~~R~~~~-~~fs-~~-~~~~~~~i~~~~~~l~~~l~~~------~~~~d~~~~~~~~~~~~vi~~-~~G~~~~~ 156 (396)
T 1n40_A 90 ---ADAGLRKAVM-KAIT-PK-APGLEQFLRDTANSLLDNLITE------GAPADLRNDFADPLATALHCK-VLGIPQED 156 (396)
T ss_dssp ---HHTTCHHHHH-HHTS-SC-STTHHHHHHHHHHHHHHHHHHH------CSCEETTTTTHHHHHHHHHHH-HHTCCGGG
T ss_pred ---HHHHHHHHHH-HhhC-hH-HHHhHHHHHHHHHHHHHHHHhc------CCCccHHHHHHHHhHHHHHHH-HhCCChhh
Confidence 8999999999 9999 99 9999999999999999999874 5579998665 5899999998 79998752
Q ss_pred cccchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCH
Q 045977 205 ENEIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDL 284 (311)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dl 284 (311)
.+.+.+....+..... ..| .++..++.+.+ +++.++|+ + ...++|+
T Consensus 157 -------~~~~~~~~~~~~~~~~------~~p----------~~~~~~~~~~~-~~~~~~i~------~----~~~~~dl 202 (396)
T 1n40_A 157 -------GPKLFRSLSIAFMSSA------DPI----------PAAKINWDRDI-EYMAGILE------N----PNITTGL 202 (396)
T ss_dssp -------HHHHHHTHHHHTBCCS------SCC----------HHHHHHHHHHH-HHHHHHHH------C----TTCCSHH
T ss_pred -------HHHHHHHHHHHhcccc------CCC----------HHHHHHHHHHH-HHHHHHHh------C----CCCCCCH
Confidence 2234433333221100 011 14555666777 88888776 1 2335799
Q ss_pred HHHHHHhccccCCccccCHhhhhhhc
Q 045977 285 MGILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 285 l~~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
++.|++...++ ++..++++++.+++
T Consensus 203 l~~ll~~~~~~-~~~~l~~~~i~~~~ 227 (396)
T 1n40_A 203 MGELSRLRKDP-AYSHVSDELFATIG 227 (396)
T ss_dssp HHHHHHHHTSG-GGTTSCHHHHHHHH
T ss_pred HHHHHHhhccc-ccCCCCHHHHHHHH
Confidence 99999874120 12359999988765
No 70
>2wiy_A XPLA-heme, cytochrome P450-like protein XPLA; CYT-P450, RDX, bioremediation, electron transport; HET: HEM; 1.49A {Rhodococcus} PDB: 2wiv_A*
Probab=99.77 E-value=2.2e-18 Score=144.21 Aligned_cols=208 Identities=12% Similarity=0.105 Sum_probs=145.6
Q ss_pred CChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccccCCCceEeccCChhHHHHHH
Q 045977 56 SKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKH 135 (311)
Q Consensus 56 ~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~w~~~R~ 135 (311)
.+|+..+.++++ +|||+++..| .++|++++.+++++.+. .|+.++...........+.+++..+ |+.|+++|+
T Consensus 20 ~dp~~~~~~lr~-~~pv~~~~~g---~~~v~~~~~v~~~l~d~--~fs~~~~~~~~~~~~~~~~~l~~~d-g~~h~~~R~ 92 (394)
T 2wiy_A 20 NNPYPWYRRLQQ-DHPVHKLEDG---TYLVSRYADVSHFAKLP--IMSVEPGWADAGPWAVASDTALGSD-PPHHTVLRR 92 (394)
T ss_dssp HCCHHHHHHHHH-HCSEEECTTS---CEEECCHHHHHHHTTST--TEECHHHHHTCGGGGGGGGSGGGCC-TTHHHHHHH
T ss_pred cCccHHHHHHHh-cCCeEEecCC---eEEEcCHHHHHHHHcCC--CccccccccccccchhcccccccCC-chHHHHHHH
Confidence 468888888854 6899987643 78999999999999654 3444321111111111123555554 999999999
Q ss_pred HHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHHHHHHHHHHHHHHhccccCccccchHHHHHH
Q 045977 136 LCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEVTNMTNNLIFRMIMNKKRISENEIENEAKMM 215 (311)
Q Consensus 136 ~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~ 215 (311)
+++ ++|+ ++.++.+.+.+.+.++++++.+.. ++++|+.+.+..+++++++..+||.+.+. ...+
T Consensus 93 ~~~-~~fs-~~~~~~~~~~i~~~~~~l~~~~~~-------~~~~d~~~~~~~~~~~vi~~~~~G~~~~~-------~~~~ 156 (394)
T 2wiy_A 93 QTN-KWFT-PKLVDGWVRTTRELVGDLLDGVEA-------GQVIEARRDLAVVPTHVTMARVLQLPEDD-------ADAV 156 (394)
T ss_dssp HHH-TTCS-HHHHHHHTHHHHHHHHHHHHTCCT-------TCCEEHHHHHTHHHHHHHHHHHHTCCCCC-------HHHH
T ss_pred HHH-hccC-HHHHHHHHHHHHHHHHHHHHHHhc-------cCCeeHHHHHHhhhHHHHHHHHcCCCHhH-------HHHH
Confidence 999 9999 999999999999999999887753 55799999999999999999999987653 2234
Q ss_pred HHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhcccc
Q 045977 216 RKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLETCRDE 295 (311)
Q Consensus 216 ~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~ 295 (311)
.+.+....... ...|. ....++...+...+.+++.++|++++++. .+|+++.|++...++
T Consensus 157 ~~~~~~~~~~~------~~~p~------~~~~~~~~~~~~~l~~~~~~~i~~rr~~~--------~~dll~~Ll~~~~~~ 216 (394)
T 2wiy_A 157 MEAMFEAMLMQ------SAEPA------DGDVDRAAVAFGYLSARVAEMLEDKRVNP--------GDGLADSLLDAARAG 216 (394)
T ss_dssp HHHHHHHHGGG------SSSCC------TTHHHHHHHHHHHHHHHHHHHHHHHHHSC--------CSSHHHHHHHHHHTT
T ss_pred HHHHHHHHHhc------cCCcc------chHHHHHHHHHHHHHHHHHHHHHHhhcCC--------CCcHHHHHHHhhhcC
Confidence 33332221100 01121 12234555677888899999999888642 258999999875332
Q ss_pred CCccccCHhhhhhhc
Q 045977 296 NSEVTLTRNQIKYFV 310 (311)
Q Consensus 296 ~~~~~l~~~ei~~~i 310 (311)
.+|++|+.+++
T Consensus 217 ----~ls~~el~~~~ 227 (394)
T 2wiy_A 217 ----EITESEAIATI 227 (394)
T ss_dssp ----SSCHHHHHHHH
T ss_pred ----CCCHHHHHHHH
Confidence 39999988765
No 71
>3p3o_A Cytochrome P450; monooxygenase, oxidoreductase; HET: HEM; 1.54A {Streptomyces thioluteus} PDB: 3p3x_A* 3p3z_A* 3p3l_A*
Probab=99.75 E-value=8.8e-19 Score=147.69 Aligned_cols=210 Identities=13% Similarity=0.091 Sum_probs=145.1
Q ss_pred CCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCc----cccc-ccCCCceEeccCChh
Q 045977 55 SSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCP----SKYN-IYDGSGFVTGPYGAY 129 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~----~~~~-~~~~~~l~~~~~g~~ 129 (311)
..+|+.+ . +.++||||+++..++.. ++|++++.+++|+.++...+..+..... .... ...+.++++.+ |+.
T Consensus 32 ~~~P~~~-~-~lr~~gpv~~~~~g~~~-~vv~~~~~v~~vL~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g~~ 107 (416)
T 3p3o_A 32 PNFSWDS-P-EVAEAREKSWIARTPLA-LLVLRYAEADQLARDKRLISGFRGLVDMVGTPEGPVRDFMVDFLQSLD-GAD 107 (416)
T ss_dssp TTCCTTS-H-HHHHHHHHCSEEECSSS-EEECSHHHHHHHHHCTTEECSHHHHHHHHTCCSSHHHHHHHHSGGGCC-HHH
T ss_pred ccCCchH-H-HHHHhCCccccccCCCc-eEEeCHHHHHHHHcCcccccCCccccccccccccchhhhhcCccccCC-chH
Confidence 4667777 4 44789999999886656 9999999999999866421111100000 0000 00123555555 999
Q ss_pred HHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHH-HHHHHHHHHHHHHhccccCccccc
Q 045977 130 WRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTE-VTNMTNNLIFRMIMNKKRISENEI 208 (311)
Q Consensus 130 w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~-~~~~~~~vi~~~~fG~~~~~~~~~ 208 (311)
|+++||+++ ++|+ +..++.+.+.+.+.++.+++.+ .. | .+|+... ...+++++++. +||.+.+.
T Consensus 108 h~~~Rr~~~-~~fs-~~~l~~~~~~i~~~~~~ll~~l-~~------g-~~d~~~~~~~~~~~~vi~~-l~G~~~~~---- 172 (416)
T 3p3o_A 108 HRRLRGLAT-HPFT-PRRITAVQPFVRSTVEQLIDKL-PQ------G-DFDFVQHFPHPLPALVMCQ-LLGFPLED---- 172 (416)
T ss_dssp HHHHHHTTC-GGGS-HHHHHHHHHHHHHHHHHHHHTC-CS------S-SEEHHHHTTTHHHHHHHHH-HHTCCGGG----
T ss_pred HHHHHHHHH-HhhC-HHHHHHHHHHHHHHHHHHHHhh-cc------C-CccHHHHHHHHHHHHHHHH-HhCCCHHH----
Confidence 999999999 9999 9999999999999999999999 43 4 5896554 55699999998 58987653
Q ss_pred hHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHH
Q 045977 209 ENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGIL 288 (311)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~l 288 (311)
.+.+..+...+... +.+. ......++..++.+++.+++.++|++++++ ..+|+++.|
T Consensus 173 ---~~~~~~~~~~~~~~---------~~~~---~~~~~~~~~~~~~~~l~~~~~~~i~~rr~~--------~~~dll~~l 229 (416)
T 3p3o_A 173 ---YDTVGRLSIETNLG---------LALS---NDQDILVKVEQGLGRMFDYLVAAIEKRKVE--------PGDDLTSDI 229 (416)
T ss_dssp ---HHHHHHHHHTTCGG---------GTTC---SCHHHHHHHHHHHHHHHHHHHHHHHHHHHS--------CCSSHHHHH
T ss_pred ---HHHHHHHHHHHHhh---------cccc---cchhhHHHHHHHHHHHHHHHHHHHHHHHhC--------CCccHHHHH
Confidence 23333333222111 1110 012335677788899999999999999864 237999999
Q ss_pred HHhccccCCccccCHhhhhhhc
Q 045977 289 LETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 289 l~~~~~~~~~~~l~~~ei~~~i 310 (311)
++...++ .++++|+.+++
T Consensus 230 l~~~~~~----~ls~~el~~~~ 247 (416)
T 3p3o_A 230 VRAFHDG----VLDDYELRTLV 247 (416)
T ss_dssp HHHHHTT----SSCHHHHHHHH
T ss_pred HHhhccC----CCCHHHHHHHH
Confidence 9875433 49999998765
No 72
>3b4x_A 367AA long hypothetical cytochrome P450; HEM protein, heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 1.94A {Sulfolobus tokodaii} PDB: 1ue8_A*
Probab=99.73 E-value=1.6e-17 Score=137.71 Aligned_cols=193 Identities=11% Similarity=0.068 Sum_probs=137.1
Q ss_pred hhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCC-CC-cc-----c-ccccC--CCceEeccCC
Q 045977 58 LPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYE-PC-PS-----K-YNIYD--GSGFVTGPYG 127 (311)
Q Consensus 58 ~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~-~~-~~-----~-~~~~~--~~~l~~~~~g 127 (311)
|+..+.++ ++||||+++. | .++|++|+.+++++.++ ..|++++. .. .. . .+.+. +.++++.+ |
T Consensus 1 p~~~~~~l-r~~gpv~~~~-g---~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d-g 73 (367)
T 3b4x_A 1 MYDWFKQM-RKESPVYYDG-K---VWNLFKYEDCKMVLNDH-KRFSSNLTGYNDKLEMLRSGKVFFDIPTRYTMLTSD-P 73 (367)
T ss_dssp CHHHHHHH-HHHCSEEECS-S---SEEECSHHHHHHHHHCT-TTEECCCSSTTTTHHHHHHTCCCCCCGGGSSGGGCC-T
T ss_pred CCHHHHHH-HHcCCceeeC-C---EEEEecHHHHHHHHcCc-hhhccCcccccccccccccccchhhcccccccccCC-c
Confidence 45677777 5799999987 3 89999999999999865 35777642 21 11 2 22221 25777775 9
Q ss_pred hhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCccc
Q 045977 128 AYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRISEN 206 (311)
Q Consensus 128 ~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~ 206 (311)
+.|+++|++++ ++|+ +..++. +.+.+.++++++.|. . .+|+.+.+ ..+++++++. +||.+ +.
T Consensus 74 ~~h~~~R~~~~-~~fs-~~~l~~--~~i~~~~~~l~~~l~-g--------~~d~~~~~~~~~~~~vi~~-~~G~~-~~-- 136 (367)
T 3b4x_A 74 PLHDELRNLTA-DAFN-PSNLPV--DFVREVTVKLLSELD-E--------EFDVIESFAIPLPILVISK-MLGIN-PD-- 136 (367)
T ss_dssp THHHHHHHTTG-GGGS-GGGSCH--HHHHHHHHHHHHTCC-S--------EEEHHHHTTTHHHHHHHHH-HHTCC-CC--
T ss_pred hhHHHHHHHHH-HhcC-Hhhhcc--hHHHHHHHHHHHhcc-C--------CcchHHHHHHhhHHHHHHH-HcCCC-Cc--
Confidence 99999999999 9999 999988 899999988887764 2 38998665 7999999999 79998 52
Q ss_pred cchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHH
Q 045977 207 EIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMG 286 (311)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~ 286 (311)
.+.+......+...+. ..|. ..++. ++.+.+.+++.++|++++++ ..+|+++
T Consensus 137 -----~~~~~~~~~~~~~~~~------~~p~--------~~~~~-~~~~~~~~~~~~~i~~r~~~--------~~~dll~ 188 (367)
T 3b4x_A 137 -----VKKVKDWSDLVALRLG------RADE--------IFSIG-RKYLELISFSKKELDSRKGK--------EIVDLTG 188 (367)
T ss_dssp -----HHHHHHHHHHHHTTTT------STTG--------GGCCC-HHHHHHHHHHHHHHHHHTTT--------CCSSHHH
T ss_pred -----HHHHHHHHHHHHhccC------CChh--------hHHHH-HHHHHHHHHHHHHHHHHhcC--------CCCCHHH
Confidence 2234444443332211 1221 11222 56778889999999888753 2369999
Q ss_pred HHHHhccccCCccccCHhhhhhhc
Q 045977 287 ILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 287 ~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.|++. + ++++|+.+++
T Consensus 189 ~ll~~----~----ls~~el~~~~ 204 (367)
T 3b4x_A 189 KIANS----N----LSELEKEGYF 204 (367)
T ss_dssp HHHTS----S----SCHHHHHHHH
T ss_pred HHHhc----c----CCHHHHHHHH
Confidence 99976 2 8899987764
No 73
>1io7_A Cytochrome P450 CYP119; thermophilic, cytochromo P450, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: HEM; 1.50A {Sulfolobus solfataricus} SCOP: a.104.1.1 PDB: 1f4u_A* 1f4t_A* 1io9_A* 1io8_A*
Probab=99.70 E-value=2.3e-17 Score=136.84 Aligned_cols=192 Identities=10% Similarity=0.118 Sum_probs=134.6
Q ss_pred hhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCC-----CCcc--cc--ccc-CCCceEeccCC
Q 045977 58 LPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYE-----PCPS--KY--NIY-DGSGFVTGPYG 127 (311)
Q Consensus 58 ~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~-----~~~~--~~--~~~-~~~~l~~~~~g 127 (311)
|+..+.++ ++||||+++ + +.++|++|+.+++++.+. ..|++++. .... .. +.. .+.++++.+ |
T Consensus 1 p~~~~~~l-r~~Gpv~~~--g--~~~vv~~~~~v~~vl~~~-~~f~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-g 73 (368)
T 1io7_A 1 MYDWFSEM-RKKDPVYYD--G--NIWQVFSYRYTKEVLNNF-SKFSSDLTGYHERLEDLRNGKIRFDIPTRYTMLTSD-P 73 (368)
T ss_dssp CHHHHHHH-HHHCSEEEC--S--SCEEECSHHHHHHHHHCT-TTEECCCSSHHHHHHHHTTTCCCCSCGGGSSGGGCC-T
T ss_pred CCHHHHHH-HhcCCeEeE--C--CEEEEecHHHHHHHHcCc-ccccccccccccccccccccccccccccccccccCC-C
Confidence 45677777 689999987 3 589999999999999864 35777653 1100 11 111 114666665 9
Q ss_pred hhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCccc
Q 045977 128 AYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRISEN 206 (311)
Q Consensus 128 ~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~ 206 (311)
+.|+++|++++ ++|+ +..++.+.+.+.++++++++.| .. | .+|+.+.+ ..+++++++.+ ||.+.+.
T Consensus 74 ~~h~~~R~~~~-~~f~-~~~~~~~~~~i~~~~~~l~~~l-~~------g-~~d~~~~~~~~~~~~vi~~~-~G~~~~~-- 140 (368)
T 1io7_A 74 PLHDELRSMSA-DIFS-PQKLQTLETFIRETTRSLLDSI-DP------R-EDDIVKKLAVPLPIIVISKI-LGLPIED-- 140 (368)
T ss_dssp THHHHHHGGGT-TTTC-HHHHHHHHHHHHHHHHHHHHTC-CT------T-SEEHHHHTTTHHHHHHHHHH-HTCCGGG--
T ss_pred hHHHHHHHHHH-hhcC-HHHHHHHHHHHHHHHHHHHHHh-hc------C-CccHHHHHHHHHHHHHHHHH-hCCCHHH--
Confidence 99999999999 9999 9999999999999999999999 53 4 69999866 78999999999 9998753
Q ss_pred cchHHHHHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHH
Q 045977 207 EIENEAKMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMG 286 (311)
Q Consensus 207 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~ 286 (311)
.+.+...... +... .. .|. ..++..++.+.+.+++.+.| + . .+|+++
T Consensus 141 -----~~~~~~~~~~----~~~~-~~--~p~--------~~~~~~~~~~~~~~~~~~~i-----~------~--~~d~l~ 187 (368)
T 1io7_A 141 -----KEKFKEWSDL----VAFR-LG--KPG--------EIFELGKKYLELIGYVKDHL-----N------S--GTEVVS 187 (368)
T ss_dssp -----HHHHHHHGGG----CTTS-CC--CTT--------CHHHHHHHHHHHHHHHHHHT-----T------S--SCHHHH
T ss_pred -----HHHHHHHHHH----HHhc-cC--ChH--------HHHHHHHHHHHHHHHHHHHh-----C------C--CCCHHH
Confidence 1223222111 1100 00 121 12455566677777777776 1 1 258999
Q ss_pred HHHHhccccCCccccCHhhhhhhc
Q 045977 287 ILLETCRDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 287 ~ll~~~~~~~~~~~l~~~ei~~~i 310 (311)
.|++. + ++++|+.+++
T Consensus 188 ~ll~~----~----l~~~ei~~~~ 203 (368)
T 1io7_A 188 RVVNS----N----LSDIEKLGYI 203 (368)
T ss_dssp HHHTS----S----CCHHHHHHHH
T ss_pred HHHhc----c----CCHHHHHHHH
Confidence 99965 2 8889887764
No 74
>2rfb_A Cytochrome P450; heme, iron, metal-binding, monooxygenase, oxidoreductase; HET: HEM; 2.50A {Picrophilus torridus} PDB: 2rfc_A*
Probab=99.66 E-value=5e-16 Score=127.54 Aligned_cols=180 Identities=14% Similarity=0.147 Sum_probs=122.6
Q ss_pred HHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccccCCCceEeccCChhHHHHHHHHHHHHhcChh
Q 045977 67 RRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQ 146 (311)
Q Consensus 67 ~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~ 146 (311)
++||||+++ | +++|++|+++++|+.++. .|.+++....... ++.++++.+ |+.|+++|++++ ++|+ +.
T Consensus 2 r~~gpv~~~---g--~~vv~~~~~v~~vl~~~~-~f~~~~~~~~~~~---~~~~l~~~~-g~~~~~~R~~~~-~~fs-~~ 69 (343)
T 2rfb_A 2 RLNDPVHYD---G--AWHVYKYSDVKHVLMNDK-IFSSNPGNRYSNA---GGISFITMD-NPEHKEFRDISA-PYFL-PS 69 (343)
T ss_dssp -CCCCEEET---T--EEEECSHHHHHHHHHCTT-TEESSCSSCCC------CCGGGGCC-HHHHHHHHHHHH-HHHS-HH
T ss_pred CCcCCeeee---C--eEEEcCHHHHHHHHhChh-hcccCCcCCCCCc---cccccccCC-chHHHHHHHHhh-hhcC-HH
Confidence 689999986 3 899999999999998653 5777652111111 235777665 999999999999 9999 99
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCccccchHHHHHHHHHHHHHHHH
Q 045977 147 QIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRISENEIENEAKMMRKLVVEMMGL 225 (311)
Q Consensus 147 ~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (311)
+++.+.+.+.++++++++.|. ++|+.+.+ ..+++++++.+ ||.+.+. .+.+......+...
T Consensus 70 ~l~~~~~~i~~~~~~l~~~l~----------~~d~~~~~~~~~~~~vi~~~-~G~~~~~-------~~~~~~~~~~~~~~ 131 (343)
T 2rfb_A 70 KINDYKDFIEETSNDLIKNID----------NKDIISEYAVRLPVNIISKI-LGIPDSD-------MPLFKLWSDYIIGN 131 (343)
T ss_dssp HHGGGHHHHHHHHHHHHTTCT----------TSCHHHHTTTHHHHHHHHHH-HTCCGGG-------HHHHHHHHHHHHTS
T ss_pred HHHHHHHHHHHHHHHHHHhcc----------ccCHHHHHhhhhhHHHHHHH-cCCCHHH-------HHHHHHHHHHHhhc
Confidence 999999999999998887654 37888765 89999999998 9988753 22344443333221
Q ss_pred hcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhccccCCccccCHhh
Q 045977 226 AAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLETCRDENSEVTLTRNQ 305 (311)
Q Consensus 226 ~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~~~~~~~~~l~~~e 305 (311)
..|.+ ...++. ++.+.+.+++.++| .+| ++.|++...+ +..++++|
T Consensus 132 --------~~p~~------~~~~~~-~~~~~~~~~~~~~i---------------~~d-l~~ll~~~~~---~~~l~~~e 177 (343)
T 2rfb_A 132 --------KRDEN------FNYVNN-RMVSRLLEIFKSDS---------------HGI-INVLAGSSLK---NRKLTMDE 177 (343)
T ss_dssp --------CCSSH------HHHHHH-HHHHHHHHHHHSCC---------------SSH-HHHHHTCBCS---SSBCCHHH
T ss_pred --------cCcch------hhHHHH-HHHHHHHHHHHHHH---------------hcc-HHHHHhhhcC---CCCCCHHH
Confidence 01211 011233 44555555554443 257 8999976432 24599999
Q ss_pred hhhhc
Q 045977 306 IKYFV 310 (311)
Q Consensus 306 i~~~i 310 (311)
+.+++
T Consensus 178 i~~~~ 182 (343)
T 2rfb_A 178 KIKYI 182 (343)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 88764
No 75
>4dxy_A Cytochrome P450, CYP101D2; cytochrome P450 mutant, HAEM-dependent, mono-oxygenases, oxidoreductase; HET: HEM; 2.00A {Novosphingobium aromaticivorans} PDB: 3nv6_A* 3nv5_A*
Probab=99.65 E-value=7.9e-15 Score=123.23 Aligned_cols=212 Identities=10% Similarity=0.125 Sum_probs=139.8
Q ss_pred CCChhHHHHHHHHHhC-CceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcccccccCCCceEeccCChhHHHH
Q 045977 55 SSKLPESLQTLARRYG-PLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPSKYNIYDGSGFVTGPYGAYWRFM 133 (311)
Q Consensus 55 ~~~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~g~~w~~~ 133 (311)
..+++..+.+++++.+ +++..-.+ ...++|++++.+++|+.+.. .|+.............. ..++...||+.|+++
T Consensus 36 ~~~~~~~~~~lr~~~~~~~~~~~~~-gg~W~vtr~~dv~~vl~d~~-~fs~~~~~~~~~~~~~~-~~~~~~~D~p~H~r~ 112 (417)
T 4dxy_A 36 EDGYHEAWKKVQHPGIPDLIWTPFT-GGHWIATNGDTVKEVYSDPT-RFSSEVIFLPKEAGEKA-QMVPTKMDPPEHTPY 112 (417)
T ss_dssp GGCHHHHHHHHSCTTCCSEEEESST-TSEEEECSHHHHHHHHTCTT-TEESSCCSSSTTSSCSS-CTTTTTCCTTTHHHH
T ss_pred hcChHHHHHHHHhhCCCCEEecCCC-CCEEEECCHHHHHHHHcCch-hccCCCccccccccccc-ccCcccCCcHHHHHH
Confidence 3578888888865543 35544333 35789999999999997543 45544322111111111 222333359999999
Q ss_pred HHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH-HHHHHHHHHHHHhccccCccccchHHH
Q 045977 134 KHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV-TNMTNNLIFRMIMNKKRISENEIENEA 212 (311)
Q Consensus 134 R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~-~~~~~~vi~~~~fG~~~~~~~~~~~~~ 212 (311)
|++++ ++|+ +++++.+.+.+.+.++++++.+... | .+|+...+ ..+++.+++. ++|.+.. +.
T Consensus 113 Rrll~-~~Fs-~~~l~~~~~~i~~~~~~lld~l~~~------g-~~D~v~~~a~~l~~~vi~~-llg~~~~-------d~ 175 (417)
T 4dxy_A 113 RKALD-KGLN-LAKIRKVEDKVREVASSLIDSFAAR------G-ECDFAAEYAELFPVHVFMA-LADLPLE-------DI 175 (417)
T ss_dssp HHHHH-HHHC-HHHHHTTHHHHHHHHHHHHHHHHTT------S-EEEHHHHTTTTHHHHHHHH-HTTCCGG-------GH
T ss_pred HHHhh-hhcC-HHHHHHHHHHHHHHHHHHHHHhhhc------C-CeeeHHHHHhhhHHHHHHH-HcCCCHH-------HH
Confidence 99999 9999 9999999999999999999999874 4 57765544 5567777766 4787765 23
Q ss_pred HHHHHHHHHHHHHhcccCcchhhcccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCCCCHHHHHHHhc
Q 045977 213 KMMRKLVVEMMGLAAKLGVSKVFSFRTKMDLHGIGKKLRDVFWRYDELLEKMMTDYEDDNGIKDQENDDGDLMGILLETC 292 (311)
Q Consensus 213 ~~~~~~~~~~~~~~~~~~~~~~~P~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~dll~~ll~~~ 292 (311)
..+..+...+..... ..| .........+...+.+++.+++++|++. ..+|+++.|+...
T Consensus 176 ~~~~~~~~~~~~~~~------~~~-------~~~~~~~~~~~~~~~~~~~~li~~rr~~--------~~ddl~s~L~~~~ 234 (417)
T 4dxy_A 176 PVLSEYARQMTRPEG------NTP-------EEMATDLEAGNNGFYAYVDPIIRARVGG--------DGDDLITLMVNSE 234 (417)
T ss_dssp HHHHHHHHHHHSCCC------SSH-------HHHHHHHHHHHHHHHHHHHHHHHHHTTC--------CCCSHHHHHHTCE
T ss_pred HHHHhhhhhhccccc------cCh-------HHHHHHHHHHHHHHHHHHHHHHHHHhcC--------Cccchhhhhcccc
Confidence 344444333221100 001 1223556667788899999999888743 3479999999874
Q ss_pred cccCCccccCHhhhhhhc
Q 045977 293 RDENSEVTLTRNQIKYFV 310 (311)
Q Consensus 293 ~~~~~~~~l~~~ei~~~i 310 (311)
.+ + ..++++++.+++
T Consensus 235 ~~-~--~~~~~~e~~~~~ 249 (417)
T 4dxy_A 235 IN-G--ERIAHDKAQGLI 249 (417)
T ss_dssp ET-T--EECCHHHHHHHH
T ss_pred cc-C--CccchhHHHHHH
Confidence 43 2 458999987765
No 76
>4dnj_A Putative cytochrome P450; oxidoreductase; HET: HEM ANN; 1.80A {Rhodopseudomonas palustris} PDB: 2fr7_A* 4do1_A* 4dnz_A*
Probab=99.64 E-value=5e-15 Score=124.51 Aligned_cols=148 Identities=14% Similarity=0.095 Sum_probs=105.5
Q ss_pred CCCCCeeccc---cccCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCC---ccccc-
Q 045977 42 PPALPIIGHS---YLLSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPC---PSKYN- 114 (311)
Q Consensus 42 p~~~p~~G~~---~~~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~---~~~~~- 114 (311)
+.++|.+|-- ..+..+|+.++.++ +++|||+++ .+..+++|++++.+++++.+.. .|+...... .....
T Consensus 17 ~~~~P~~~~dp~~~~~~~dP~~~~~~l-R~~gPV~~~--~~~~~~~vt~~~~v~~vl~d~~-~fs~~~~~~~~~~~~~~~ 92 (412)
T 4dnj_A 17 GAGVPHLGIDPFALDYFADPYPEQETL-REAGPVVYL--DKWNVYGVARYAEVYAVLNDPL-TFCSSRGVGLSDFKKEKP 92 (412)
T ss_dssp STTSCEECCCTTSHHHHHSCHHHHHHH-HHHCSSEEE--TTTTEEEECSHHHHHHHHTCTT-TEESTTCSSSSCTTTSCC
T ss_pred CCCCCccCCCCCCHHHHhCcHHHHHHH-HhcCCEEEE--CCCCEEEECCHHHHHHHHcCCc-cccCCCcccccccccccc
Confidence 3467877621 22356889999888 567999865 4567899999999999997554 343322111 11111
Q ss_pred ccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccc-hHHHHHHHHHHH
Q 045977 115 IYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNL-GTEVTNMTNNLI 193 (311)
Q Consensus 115 ~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~-~~~~~~~~~~vi 193 (311)
...+..+++. ||+.|+++|++++ ++|+ +++++.+.+.+.+.++++++.+... ++.+|+ .+....++++++
T Consensus 93 ~~~~~~~~~~-Dg~~H~r~R~~~~-~~Fs-~~~l~~~~~~i~~~~~~l~~~~~~~------~~~~D~v~~~~~~~~~~~i 163 (412)
T 4dnj_A 93 WRPPSLILEA-DPPAHTRTRAVLS-KVLS-PATMKRLRDGFAAAADAKIDELLAR------GGNIDAIADLAEAYPLSVF 163 (412)
T ss_dssp SSCCCTTTTC-CTTHHHHHHHHHH-HHTC-HHHHHHHHHHHHHHHHHHHHHHHHT------TSEEETCCCCCCHHHHHHH
T ss_pred ccCCCccccC-ChHHHHHHHhhcc-cccC-HHHHHHhhHHHHHHHHHHHHhhhcc------CCCceeHHHHHhhhhHhHH
Confidence 1112244444 5999999999999 9999 9999999999999999999999875 556664 566777888888
Q ss_pred HHHHhccccC
Q 045977 194 FRMIMNKKRI 203 (311)
Q Consensus 194 ~~~~fG~~~~ 203 (311)
+.+ +|.+..
T Consensus 164 ~~l-~g~~~~ 172 (412)
T 4dnj_A 164 PDA-MGLKQE 172 (412)
T ss_dssp HHH-HTCCST
T ss_pred HHH-cCCchh
Confidence 886 565544
No 77
>2yjn_B Erycii, DTDP-4-keto-6-deoxy-hexose 3,4-isomerase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=98.18 E-value=2.1e-09 Score=88.68 Aligned_cols=134 Identities=10% Similarity=0.050 Sum_probs=85.1
Q ss_pred CCCC-CCCCCeeccccc-----cCCChhHHHHHHHHHhCCceEEeecCeeEEEEcCHHHHHHHHHhCCcccCCCCCCCcc
Q 045977 38 FPPS-PPALPIIGHSYL-----LSSKLPESLQTLARRYGPLMQIRIGPSTYVVVSNATVAKEIFTTHDLDFASRYEPCPS 111 (311)
Q Consensus 38 ~ppg-p~~~p~~G~~~~-----~~~~~~~~~~~~~~~yG~v~~~~~~~~~~v~v~~p~~i~~i~~~~~~~~~~~~~~~~~ 111 (311)
.||| ++++|++|+... +..+++..+.+++++ ||++.. .+.++|++++.+++|+.+. .|++++.....
T Consensus 35 ~ppG~~~~~P~~G~~~~~~~~~~~~dp~~~~~~lr~~--pV~~~~---~~~~vv~~~~~v~~vl~d~--~f~~~~~~~~~ 107 (381)
T 2yjn_B 35 MIRGLHWGYGSNGDPYPMLLCGHDDDPQRRYRSMRES--GVRRSR---TETWVVADHATARQVLDDP--AFTRATGRTPE 107 (381)
T ss_dssp HHHHHHHHHHHHTCHHHHHHHTCCSCCHHHHHHHHHH--CEEECS---SSCEEECSHHHHHHHHHCS--SEESSCCCCCH
T ss_pred CCCcccccccccCCchhhcCchhccCchHHHHHHHhC--CceeCC---CCEEEEcCHHHHHHHHcCC--CcCCCcccccc
Confidence 4666 556899997644 356899999999765 999864 4589999999999999863 46655321100
Q ss_pred c------ccccCCCceEeccCChhHHHHHHHHHHHHhcChhhhHHHHHHHHHHHHHHHHHHHHhccccCCCCCccchHHH
Q 045977 112 K------YNIYDGSGFVTGPYGAYWRFMKHLCVTKLFAGPQQIDRFDKIREQEIDRLLKSLIMKNYSEEGGPPCNLGTEV 185 (311)
Q Consensus 112 ~------~~~~~~~~l~~~~~g~~w~~~R~~~~~~~f~~~~~l~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~ 185 (311)
. .....+.++++.+ |+.| + ++|+ . .+.+++.++++++.|. . .+|+...+
T Consensus 108 ~~~~~~~~~~~~~~~l~~~d-g~~H-------~-~~Ft------~-~~~i~~~~~~ll~~~~-g--------~~Dl~~~~ 162 (381)
T 2yjn_B 108 WMRAAGAPPAEWAQPFRDVH-AASW-------E-GEVP------D-VGELAESFAGLLPGAG-A--------RLDLVGDF 162 (381)
T ss_dssp HHHHHTCCHHHHTHHHHHHH-HCCC-------C-SCCC------C-CSCHHHHTSTTSCC---------------CCCCC
T ss_pred cccccccccchhhhhhhhCC-chhh-------h-hccC------C-hHHHHHHHHHHHHhcc-C--------cchHHHHH
Confidence 0 0000023566665 8888 4 7776 2 5778888888887765 2 47888655
Q ss_pred -HHHHHHHHHHHHhccccCc
Q 045977 186 -TNMTNNLIFRMIMNKKRIS 204 (311)
Q Consensus 186 -~~~~~~vi~~~~fG~~~~~ 204 (311)
..+++++|+++ ||.+.+.
T Consensus 163 a~~l~~~vi~~l-~G~~~~~ 181 (381)
T 2yjn_B 163 AWQVPVQGMTAV-LGAAGVL 181 (381)
T ss_dssp CTHHHHHHHHTC------CC
T ss_pred HHHHHHHHHHHH-cCCCHHH
Confidence 69999999995 9998864
No 78
>2diu_A KIAA0430 protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=72.04 E-value=13 Score=23.42 Aligned_cols=60 Identities=15% Similarity=0.135 Sum_probs=41.7
Q ss_pred Ceecccccc-CC-ChhHHHHHHHHHhC-CceEEeecCeeEEEEcCHHHHHHHHHh-CCcccCCCC
Q 045977 46 PIIGHSYLL-SS-KLPESLQTLARRYG-PLMQIRIGPSTYVVVSNATVAKEIFTT-HDLDFASRY 106 (311)
Q Consensus 46 p~~G~~~~~-~~-~~~~~~~~~~~~yG-~v~~~~~~~~~~v~v~~p~~i~~i~~~-~~~~~~~~~ 106 (311)
-+++|+..- .. .....+.++..+|| +|..+ .+|.-.|...+.+.++..+.. ++..+..++
T Consensus 12 lYV~NL~~~~~~~~lk~~L~~lF~~yGG~Vl~V-tgG~AfV~F~~~esA~~A~~~l~G~~l~gr~ 75 (96)
T 2diu_A 12 LYVYNLPANKDGKSVSNRLRRLSDNCGGKVLSI-TGCSAILRFINQDSAERAQKRMENEDVFGNR 75 (96)
T ss_dssp EEEESCCTTSCHHHHHHHHHHHHHTTTCCEEEC-CTTCEEEEESSHHHHHHHHHHHTTCCSSSSC
T ss_pred EEEeCCCCcCCHHHHHHHHHHHHHHcCCeeEEE-ecCEEEEEECCHHHHHHHHHHhcCCccCCce
Confidence 458888654 21 22345778889995 98888 568889999999999888753 444444444
No 79
>3lqv_A PRE-mRNA branch site protein P14; cysless mutant, PRE-mRNA splicing, adenine, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: ADE; 2.38A {Homo sapiens} SCOP: d.58.7.1 PDB: 2f9d_A 2f9j_A 2fho_B
Probab=71.71 E-value=17 Score=23.36 Aligned_cols=57 Identities=28% Similarity=0.441 Sum_probs=40.0
Q ss_pred CCCCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec------CeeEEEEcCHHHHHHHHH
Q 045977 38 FPPSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 38 ~ppgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------~~~~v~v~~p~~i~~i~~ 96 (311)
.||.|...-++||+..- -....+.++..+||+|..+.+. |.-.|-..+++.+...+.
T Consensus 3 ~~~~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~g~afV~f~~~~~A~~A~~ 65 (115)
T 3lqv_A 3 LPPEVNRILYIRNLPYK--ITAEEMYDIFGKYGPIRQIRVGNTPETRGTAYVVYEDIFDAKNAVD 65 (115)
T ss_dssp CCTTCCSEEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEECSTTTTTCEEEEESSHHHHHHHHH
T ss_pred CCCCCCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEeeCCCCCcEEEEEECCHHHHHHHHH
Confidence 45555556678887642 2345577888999999888762 245677788988888876
No 80
>1s79_A Lupus LA protein; RRM, alpha/beta, RNA binding protein, translation; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=67.11 E-value=21 Score=22.60 Aligned_cols=50 Identities=18% Similarity=0.217 Sum_probs=35.8
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec--------CeeEEEEcCHHHHHHHHHh
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG--------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~i~~i~~~ 97 (311)
-++|++.. .-....+.++..+||+|..+.+. |--.|...+++.+..++..
T Consensus 14 lfV~~Lp~--~~te~~L~~~F~~~G~v~~v~i~~d~~g~~rG~aFV~F~~~e~a~~Ai~~ 71 (103)
T 1s79_A 14 VYIKGFPT--DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVET 71 (103)
T ss_dssp EEEECCCT--TCCHHHHHHHHHTSSCEEEEEEECCCTTSCCCEEEEEESSHHHHHHHHTS
T ss_pred EEEECCCC--CCCHHHHHHHHhhcCCEEEEEEEECCCCCCccEEEEEECCHHHHHHHHHc
Confidence 46777754 23355677788899999887763 3356777899999998863
No 81
>3d2w_A TAR DNA-binding protein 43; DP-43 proteinopathy, TDP-43 inclusions, RNA recognition MOTI U, ALS, RRM; HET: DNA; 1.65A {Mus musculus}
Probab=65.86 E-value=20 Score=21.94 Aligned_cols=53 Identities=19% Similarity=0.304 Sum_probs=35.4
Q ss_pred CCCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec----CeeEEEEcCHHHHHHH
Q 045977 40 PSPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG----PSTYVVVSNATVAKEI 94 (311)
Q Consensus 40 pgp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~v~v~~p~~i~~i 94 (311)
+.|...-++|++.. .-..+.+.++..+||+|..+.+. |--.|-..+++.++.+
T Consensus 8 ~~~~~~l~V~~Lp~--~~te~~L~~~F~~~G~i~~v~i~~~srGfaFV~F~~~~~A~~~ 64 (89)
T 3d2w_A 8 HHHGSKVFVGRCTE--DMTAEELQQFFCQYGEVVDVFIPKPFRAFAFVTFADDKVAQSL 64 (89)
T ss_dssp ---CCEEEEESCCT--TCCHHHHHHHHTTTSCEEEEECCSSCCSEEEEEESCHHHHHHH
T ss_pred CCCCCEEEEeCCCC--CCCHHHHHHHHhccCCEEEEEEeeCCCCEEEEEECCHHHHHHH
Confidence 33444557788764 22345677888999999988874 4456777899888753
No 82
>1iqt_A AUF1, heterogeneous nuclear ribonucleoprotein D0; RNA-binding protein, hnRNP, telomere, DNA-binding protein, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 1wtb_A 1x0f_A
Probab=60.25 E-value=22 Score=20.49 Aligned_cols=50 Identities=12% Similarity=0.206 Sum_probs=33.3
Q ss_pred eccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHhCC
Q 045977 48 IGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTTHD 99 (311)
Q Consensus 48 ~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~~~ 99 (311)
+||+.. .-..+.+.++..+||+|..+.+. |--.|-..+++.++.++..+.
T Consensus 4 v~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~Ai~~~~ 62 (75)
T 1iqt_A 4 VGGLSP--DTPEEKIREYFGGFGEVESIELPMDNKTNKRRGFCFITFKEEEPVKKIMEKKY 62 (75)
T ss_dssp ESCCCS--SCCHHHHHHHHHHHSCCSEECCCCSCCCSSSCCCEEEECSSSHHHHHHHTTSS
T ss_pred EeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCCcCCEEEEEECCHHHHHHHHHhCC
Confidence 455543 22345577788899998887763 234566789999999887543
No 83
>2krb_A Eukaryotic translation initiation factor 3 subunit B; EIF3, eukaryotic initiation factor, EIF3B, EIF3J; NMR {Homo sapiens}
Probab=58.30 E-value=26 Score=20.68 Aligned_cols=51 Identities=6% Similarity=0.159 Sum_probs=35.8
Q ss_pred eeccccccCCC----hhHHHHHHHHHhCCceEEeec-------CeeEEEEcCHHHHHHHHHh
Q 045977 47 IIGHSYLLSSK----LPESLQTLARRYGPLMQIRIG-------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 47 ~~G~~~~~~~~----~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~i~~i~~~ 97 (311)
++||+..-..+ ..+.+.++..+||+|..+.+. |--.|-..+++.++..+..
T Consensus 5 ~V~nLp~~~~~~~~~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~Ai~~ 66 (81)
T 2krb_A 5 VVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKN 66 (81)
T ss_dssp EEESCCCCCTTTHHHHHHHHHHHHHTTCCEEEEECCCBTTBCCCEEEEEESSHHHHHHHHTT
T ss_pred EEeCCCCCcHHHHHHHHHHHHHHHhhcCCeEEEEecCCCCcEeEEEEEEECCHHHHHHHHHH
Confidence 56777543222 346778888999999888764 3346777899988888863
No 84
>2nlw_A Eukaryotic translation initiation factor 3 subunit 9; eukaryotic initiation factor 3 complex, RNA recognition motif; NMR {Homo sapiens}
Probab=51.94 E-value=42 Score=21.11 Aligned_cols=60 Identities=5% Similarity=0.152 Sum_probs=40.7
Q ss_pred CCCeeccccccCCC----hhHHHHHHHHHhCCceEEeec-------CeeEEEEcCHHHHHHHHHh-CCcccC
Q 045977 44 ALPIIGHSYLLSSK----LPESLQTLARRYGPLMQIRIG-------PSTYVVVSNATVAKEIFTT-HDLDFA 103 (311)
Q Consensus 44 ~~p~~G~~~~~~~~----~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~i~~i~~~-~~~~~~ 103 (311)
..-++||+..-..+ ....+.++..+||+|..+.+. |--.|-..+++.+...+.. ++..+.
T Consensus 16 ~~l~V~nLp~~~~~~~~~t~~~l~~~F~~~G~v~~v~i~~~~g~~~G~afV~f~~~~~A~~Ai~~l~g~~~~ 87 (105)
T 2nlw_A 16 SVIVVDNVPQVGPDRLEKLKNVIHKIFSKFGKITNDFYPEEDGKTKGYIFLEYASPAHAVDAVKNADGYKLD 87 (105)
T ss_dssp SEEEEESCCCCCTTTTTHHHHHHHHHHGGGSCEEEEECCCBTTBSCCEEEEEECSSSHHHHHHHHCSSEECS
T ss_pred CEEEEeCCCcchhhhhHHHHHHHHHHHhcCCCEEEEEeeCCCCCeeeEEEEEECCHHHHHHHHHHhCCcccC
Confidence 34578888753222 457788888999999888764 3446777888888887764 443333
No 85
>2mss_A Protein (musashi1); RNA-binding domain, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2mst_A
Probab=50.14 E-value=35 Score=19.63 Aligned_cols=50 Identities=10% Similarity=0.195 Sum_probs=32.6
Q ss_pred eccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHHhCC
Q 045977 48 IGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFTTHD 99 (311)
Q Consensus 48 ~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~~~~ 99 (311)
+||+.. .-..+.+.++..+||+|..+.+.. --.|-..+++.++.++..+.
T Consensus 4 v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~ 62 (75)
T 2mss_A 4 VGGLSV--NTTVEDVKHYFEQFGKVDDAMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHF 62 (75)
T ss_dssp EECCCS--SCCHHHHHHHHHTTSCCSEECCCBCSSSTTSCBEEEEECSCHHHHHHHHSSSC
T ss_pred EecCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHHCCC
Confidence 455543 223455777888999988876531 23566689999988875333
No 86
>3s6e_A RNA-binding protein 39; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative, PSI-biology; HET: MSE CIT; 0.95A {Mus musculus} PDB: 2lq5_A
Probab=49.75 E-value=38 Score=21.99 Aligned_cols=69 Identities=13% Similarity=0.215 Sum_probs=41.8
Q ss_pred CCCCCCCCCeeccccccC--CC------hhHHHHHHHHHhCCceEEeec-----CeeEEEEcCHHHHHHHHHh-CCcccC
Q 045977 38 FPPSPPALPIIGHSYLLS--SK------LPESLQTLARRYGPLMQIRIG-----PSTYVVVSNATVAKEIFTT-HDLDFA 103 (311)
Q Consensus 38 ~ppgp~~~p~~G~~~~~~--~~------~~~~~~~~~~~yG~v~~~~~~-----~~~~v~v~~p~~i~~i~~~-~~~~~~ 103 (311)
.||.|..+-.+.|++... .+ ..+-+.+...+||.|..+.+. |.-.|-..+++.+...... ++..|.
T Consensus 2 ~~p~ps~vv~L~Nm~~~~e~~d~~~~~el~edl~~~f~kfG~V~~v~i~~~~~~G~~fV~f~~~e~A~~Ai~~lnG~~f~ 81 (114)
T 3s6e_A 2 VQPLATQCFQLSNMFNPQTEEEVGWDTEIKDDVIEECNKHGGVIHIYVDKNSAQGNVYVKCPSIAAAIAAVNALHGRWFA 81 (114)
T ss_dssp CCCCCCSEEEEESSCCTTTCCSTTHHHHHHHHHHHHHTTTTCCSEEEECTTCTTCCEEEECSSHHHHHHHHHHHTTCEET
T ss_pred CCCCCCcEEEEECCCChHHccChhHHHHHHHHHHHHHhccCCEEEEEEecCCCcEEEEEEECCHHHHHHHHHHhCCCEEC
Confidence 356676666777776541 11 223345556789999888763 3345666788877776643 555555
Q ss_pred CCC
Q 045977 104 SRY 106 (311)
Q Consensus 104 ~~~ 106 (311)
.|.
T Consensus 82 GR~ 84 (114)
T 3s6e_A 82 GKM 84 (114)
T ss_dssp TEE
T ss_pred CEE
Confidence 443
No 87
>1sjq_A Polypyrimidine tract-binding protein 1; babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=47.68 E-value=52 Score=21.01 Aligned_cols=53 Identities=9% Similarity=0.202 Sum_probs=37.8
Q ss_pred CCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec---CeeEEEEcCHHHHHHHHH
Q 045977 42 PPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~i~~i~~ 96 (311)
|...-++||+.. .-..+.+.++..+||.|..+.+. |.-.|-..+++.+.....
T Consensus 15 ~~~~LfV~nLp~--~vte~dL~~lF~~fG~V~~v~i~~~kGfaFVeF~~~~~A~~Ai~ 70 (105)
T 1sjq_A 15 PSRVIHIRKLPI--DVTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 70 (105)
T ss_dssp CCCEEEECSCCT--TSCHHHHHHHHHHHCCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCCEEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 334457888864 22345677888999999888764 345777888988888776
No 88
>1x4e_A RNA binding motif, single-stranded interacting protein 2; structural genomics, RRM domain, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=46.93 E-value=43 Score=19.82 Aligned_cols=51 Identities=16% Similarity=0.124 Sum_probs=34.0
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHH
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFT 96 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~ 96 (311)
..-++||+..- -..+.+.++..+||+|..+.+.. --.|-..+++.++.++.
T Consensus 6 ~~l~v~nlp~~--~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 65 (85)
T 1x4e_A 6 SGLYIRGLQPG--TTDQDLVKLCQPYGKIVSTKAILDKTTNKCKGYGFVDFDSPSAAQKAVT 65 (85)
T ss_dssp CEEEEESCCTT--CCHHHHHTTSTTTSCEEEEEEECCSSSCSCCSEEEEEESCHHHHHHHHH
T ss_pred cEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCcCcEEEEEECCHHHHHHHHH
Confidence 34467877542 23455667778999988876532 24567788888888775
No 89
>2cqc_A Arginine/serine-rich splicing factor 10; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=46.78 E-value=47 Score=20.16 Aligned_cols=55 Identities=22% Similarity=0.253 Sum_probs=36.9
Q ss_pred CCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec-----C----eeEEEEcCHHHHHHHHHh
Q 045977 41 SPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-----P----STYVVVSNATVAKEIFTT 97 (311)
Q Consensus 41 gp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~----~~~v~v~~p~~i~~i~~~ 97 (311)
.|...-++||+..- -..+.+.++..+||+|..+.+. + .-.|-..+++.++.++..
T Consensus 13 ~~~~~l~v~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 76 (95)
T 2cqc_A 13 DPNCCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 76 (95)
T ss_dssp CGGGCEEEESCCSS--CCHHHHHHHHHTTSCEEEEEEEECSSSSSEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCCEEEEECCCCC--CCHHHHHHHHHhcCCeeEEEEEEcCCCCCcccEEEEEECCHHHHHHHHHH
Confidence 34344567887642 2345677888999998887763 1 235666899988888863
No 90
>2a3j_A U1 small nuclear ribonucleoprotein A; computationally designed protein, RRM, U1A, RNA binding protein; NMR {Homo sapiens}
Probab=46.03 E-value=62 Score=21.41 Aligned_cols=61 Identities=20% Similarity=0.309 Sum_probs=38.1
Q ss_pred CCeecccccc-CC-ChhHHHHHHHHHhCCceEEeec------CeeEEEEcCHHHHHHHHHh-CCcccCCC
Q 045977 45 LPIIGHSYLL-SS-KLPESLQTLARRYGPLMQIRIG------PSTYVVVSNATVAKEIFTT-HDLDFASR 105 (311)
Q Consensus 45 ~p~~G~~~~~-~~-~~~~~~~~~~~~yG~v~~~~~~------~~~~v~v~~p~~i~~i~~~-~~~~~~~~ 105 (311)
.-++||+..- .. +....+.++..+||+|..+.+. |.-.|...+++.+...+.. ++..+..+
T Consensus 31 ~LfV~nL~~~~~e~~L~~~L~~~F~~~G~I~~v~i~~~~~~rG~aFV~F~~~~~A~~Ai~~lng~~l~gr 100 (127)
T 2a3j_A 31 VVLITNINPEVPKEKLQALLYALASSQGDILDIVVDLSDDNSGKAYIVFATQESAQAFVEAFQGYPFQGN 100 (127)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECCCCSSCCCEEEEESSHHHHHHHHHHSTTCCCTTS
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHhccCCCeEEEEeccCCCcCCEEEEEECCHHHHHHHHHHHCCCEeCCC
Confidence 3467887643 11 1223456788999999887763 3456777888888888754 33334333
No 91
>3beg_B Splicing factor, arginine/serine-rich 1; kinase, SR protein kinase, SR protein, PRE-mRNA splicing, at binding, chromosome partition; HET: SEP ANP; 2.90A {Homo sapiens} SCOP: d.58.7.1 PDB: 2o3d_A 1wg4_A
Probab=45.42 E-value=58 Score=20.89 Aligned_cols=59 Identities=10% Similarity=-0.017 Sum_probs=38.9
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec--CeeEEEEcCHHHHHHHHHh-CCcccCCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG--PSTYVVVSNATVAKEIFTT-HDLDFASR 105 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--~~~~v~v~~p~~i~~i~~~-~~~~~~~~ 105 (311)
--++||+..- -..+.+.++..+||+|..+.+. +--.|...+++.++..+.. +...+..+
T Consensus 18 ~l~V~nLp~~--~t~~~l~~~F~~~G~v~~~~i~~~g~afV~f~~~~~a~~Ai~~l~g~~~~gr 79 (115)
T 3beg_B 18 RVVVSGLPPS--GSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRKLDNTKFRSH 79 (115)
T ss_dssp CEEEEECCSS--CCTTHHHHHHGGGSCEEEEEECTTSEEEEEESSHHHHHHHHHHHTTCBCCCT
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEecCCEEEEEECCHHHHHHHHHHhCCCEECCc
Confidence 3467887643 2234466777899999888764 4556777889888888763 44444443
No 92
>2ad9_A Polypyrimidine tract-binding protein 1; RBD, RRM, protein-RNA complex, RNA binding protein/RNA complex; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=44.01 E-value=66 Score=21.09 Aligned_cols=51 Identities=8% Similarity=0.129 Sum_probs=36.3
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeec---CeeEEEEcCHHHHHHHHH
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~i~~i~~ 96 (311)
..-++||+..- -....+.++..+||.|..+.+. |.-.|-..+.+.+..++.
T Consensus 32 ~~LfVgNLp~~--vte~dL~~lF~~fG~V~~v~i~~~kG~AFVeF~~~e~A~~Ai~ 85 (119)
T 2ad9_A 32 RVIHIRKLPID--VTEGEVISLGLPFGKVTNLLMLKGKNQAFIEMNTEEAANTMVN 85 (119)
T ss_dssp SEEEEESCCTT--CCHHHHHHHHTTTSCCCEEEEEGGGTEEEEECSCHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEECCHHHHHHHHH
Confidence 34578888642 3355677888999999887764 345677778888887775
No 93
>2pe8_A Splicing factor 45; RRM, protein binding; 2.00A {Homo sapiens} PDB: 2peh_A
Probab=43.94 E-value=60 Score=20.58 Aligned_cols=66 Identities=12% Similarity=0.150 Sum_probs=40.0
Q ss_pred CCCCCCCeecccccc---CCChhHHHHHHHHHhCCceEEeec----------CeeEEEEcCHHHHHHHHHh-CCcccCCC
Q 045977 40 PSPPALPIIGHSYLL---SSKLPESLQTLARRYGPLMQIRIG----------PSTYVVVSNATVAKEIFTT-HDLDFASR 105 (311)
Q Consensus 40 pgp~~~p~~G~~~~~---~~~~~~~~~~~~~~yG~v~~~~~~----------~~~~v~v~~p~~i~~i~~~-~~~~~~~~ 105 (311)
|.|...-++.|+..- ..+..+-+.+...+||+|..+++. |.-.|-..+++.+...... ++..|..|
T Consensus 5 ~~~s~~l~l~Nm~~~~~l~dd~~~dl~~~f~~~G~V~~v~i~~~~~~~~~~~G~~FV~f~~~~~A~~Ai~~lnG~~~~Gr 84 (105)
T 2pe8_A 5 KCPTKVVLLRNMVGAGEVDEDLEVETKEECEKYGKVGKCVIFEIPGAPDDEAVRIFLEFERVESAIKAVVDLNGRYFGGR 84 (105)
T ss_dssp GSCCSEEEEESSSCSCCC---CHHHHHHHGGGGSCEEEEEEEECSSCCTTTSEEEEEEESSHHHHHHHHHHHTTCEETTE
T ss_pred CCCCCEEEEEcCCChHHhhHHHHHHHHHHHHhcCCEEEEEEecCCCCCCCCcEEEEEEECCHHHHHHHHHHHCCCEECCc
Confidence 345556677787632 234556777778899998887653 1224556788877776643 55555444
No 94
>1x4c_A Splicing factor, arginine/serine-rich 1; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=43.63 E-value=59 Score=20.47 Aligned_cols=51 Identities=10% Similarity=-0.063 Sum_probs=37.1
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec--CeeEEEEcCHHHHHHHHHh
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG--PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--~~~~v~v~~p~~i~~i~~~ 97 (311)
--++||+.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++..+..
T Consensus 17 ~l~V~nLp~--~~t~~~l~~~F~~~G~i~~~~i~~~g~afV~f~~~~~a~~Ai~~ 69 (108)
T 1x4c_A 17 RVVVSGLPP--SGSWQDLKDHMREAGDVCYADVYRDGTGVVEFVRKEDMTYAVRK 69 (108)
T ss_dssp EEEEESCCS--SCCHHHHHHHHGGGSCEEEEEEETTTEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEecCCEEEEEECCHHHHHHHHHH
Confidence 346788764 23456677888999999888764 4567777899988888864
No 95
>3zzy_A Polypyrimidine tract-binding protein 1; protein binding, peptide binding, RNA recognition motif; 1.40A {Homo sapiens} PDB: 3zzz_A
Probab=42.86 E-value=71 Score=21.36 Aligned_cols=49 Identities=10% Similarity=0.194 Sum_probs=34.1
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeecC-----eeEEEEcCHHHHHHHHH
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP-----STYVVVSNATVAKEIFT 96 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~-----~~~v~v~~p~~i~~i~~ 96 (311)
-++||+.. .-..+.+.++..+||+|-++.+.. .-.|...+++.++....
T Consensus 31 I~V~NL~~--~vte~~L~~lFs~yG~V~~V~i~~~~~gfqAFVef~~~~~A~~Ai~ 84 (130)
T 3zzy_A 31 IIVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKL 84 (130)
T ss_dssp EEEESCCS--CCCHHHHHHHHTTSSCEEEEEEEEETTEEEEEEEESCHHHHHHHHH
T ss_pred EEECCCCC--CCCHHHHHHHHhCcCCEEEEEEEcCCCCcEEEEEECCHHHHHHHHH
Confidence 34788753 234556788889999988877643 25677788877777664
No 96
>1sjr_A Polypyrimidine tract-binding protein 1; extended babbab motif, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2adb_A
Probab=42.62 E-value=86 Score=22.02 Aligned_cols=49 Identities=10% Similarity=0.195 Sum_probs=34.4
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeec-----CeeEEEEcCHHHHHHHHHh
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-----PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~~~~v~v~~p~~i~~i~~~ 97 (311)
++||+.. .-..+.+.++..+||.|-++++. +.-.|-..+++.+.+....
T Consensus 50 ~VgNL~~--~vted~L~~~Fs~fG~V~~V~i~~k~~rgfAFVeF~d~~~A~~Ai~~ 103 (164)
T 1sjr_A 50 IVENLFY--PVTLDVLHQIFSKFGTVLKIITFTKNNQFQALLQYADPVSAQHAKLS 103 (164)
T ss_dssp EECSCCS--CCCHHHHHHHHHHHSCEEEEEEEESSSCEEEEEEESCHHHHHHHHHH
T ss_pred EEeCcCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCEEEEEECCHHHHHHHHHH
Confidence 4688753 23455678888999999888763 2346777888888777763
No 97
>1nu4_A U1A RNA binding domain; RNA recognition motif, U1 small nuclear ribonucleoprotein, R binding domain, RNA binding protein; HET: MLA; 1.80A {Homo sapiens} SCOP: d.58.7.1 PDB: 1drz_A* 1urn_A 3hhn_B* 3egz_A* 1zzn_A* 1u6b_A* 3cun_A* 3cul_A* 3g8s_A* 3g8t_A* 3g96_A* 3g9c_A* 3irw_P* 3mum_P* 3mur_P* 3mut_P* 3muv_P* 3mxh_P* 3p49_B 3r1h_A* ...
Probab=42.34 E-value=56 Score=19.89 Aligned_cols=53 Identities=17% Similarity=0.339 Sum_probs=35.4
Q ss_pred CCeecccccc-C-CChhHHHHHHHHHhCCceEEeec------CeeEEEEcCHHHHHHHHHh
Q 045977 45 LPIIGHSYLL-S-SKLPESLQTLARRYGPLMQIRIG------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 45 ~p~~G~~~~~-~-~~~~~~~~~~~~~yG~v~~~~~~------~~~~v~v~~p~~i~~i~~~ 97 (311)
.-++||+..- . .+....+.++..+||+|..+.+. |.-.|-..+++.+...+..
T Consensus 10 ~l~V~nLp~~~~~~~l~~~l~~~f~~~G~i~~v~i~~~~~~~g~afV~f~~~~~A~~A~~~ 70 (97)
T 1nu4_A 10 TIYINNLNEKIKKDELKKSLHAIFSRFGQILDILVSRSLKMRGQAFVIFKEVSSATNALRS 70 (97)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHGGGSCEEEEECCHHHHHTTCEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCCCCHHHHHHHHHHHHHhCCCEEEEEEEcCCCcCcEEEEEeCCHHHHHHHHHH
Confidence 4467887643 1 11222344888999999888764 4457778899988888763
No 98
>2wbr_A GW182, gawky, LD47780P; DNA-binding protein, RRM, RBD, TNRC6A, mirnas, P-bodies, argonaute, mRNA decay; NMR {Drosophila melanogaster}
Probab=42.01 E-value=60 Score=20.07 Aligned_cols=51 Identities=14% Similarity=0.060 Sum_probs=34.3
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeecC---eeEEEEcCHHHHHHHHH
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---STYVVVSNATVAKEIFT 96 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---~~~v~v~~p~~i~~i~~ 96 (311)
++-++||+..- --.+.+.++..+||+|..+++.. --.|-..+++.+.....
T Consensus 8 ~wL~VgNL~~~--~te~~L~~lF~q~G~V~~~~l~~~kGfaFVey~~~~eA~~Ai~ 61 (89)
T 2wbr_A 8 SWLLLKNLTAQ--IDGPTLRTLCMQHGPLVSFHPYLNQGIALCKYTTREEANKAQM 61 (89)
T ss_dssp CEEEEECCCTT--CCCHHHHHHHHHHSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred ceEEEeCCCcc--CCHHHHHHHHHhhCCEEEEEEcCCCcEEEEEECCHHHHHHHHH
Confidence 35567887542 23467788999999999887633 34566678866665553
No 99
>3s8s_A Histone-lysine N-methyltransferase SETD1A; chromatin modification, transcription regulation, structural genomics, structural genomics consortium; 1.30A {Homo sapiens}
Probab=40.52 E-value=70 Score=20.39 Aligned_cols=51 Identities=18% Similarity=0.182 Sum_probs=35.8
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec-----C----eeEEEEcCHHHHHHHHHh
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-----P----STYVVVSNATVAKEIFTT 97 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~----~~~v~v~~p~~i~~i~~~ 97 (311)
--++||+.. .-..+.+.++..+||+|..+.+. + --.|...+++.++..+..
T Consensus 8 ~lfV~nL~~--~~te~~L~~~F~~~G~i~~v~i~~d~~tg~~rG~aFV~f~~~~~A~~Ai~~ 67 (110)
T 3s8s_A 8 EVTFARLND--NVRETFLKDMCRKYGEVEEVEILLHPRTRKHLGLARVLFTSTRGAKETVKN 67 (110)
T ss_dssp EEEEESCCT--TCCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHHhcCCeeEEEEEECCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 346788754 23456677888999999887752 1 236777899999888763
No 100
>3ue2_A Poly(U)-binding-splicing factor PUF60; RNA recognition motif, RRM, RNA binding domain, ST genomics, joint center for structural genomics, JCSG; HET: MSE; 1.23A {Homo sapiens} SCOP: d.58.7.0 PDB: 3us5_A 2dny_A
Probab=40.20 E-value=75 Score=20.69 Aligned_cols=65 Identities=14% Similarity=0.173 Sum_probs=40.9
Q ss_pred CCCCCeecccccc---CCChhHHHHHHHHHhCCceEEeecC-------------eeEEEEcCHHHHHHHHHh-CCcccCC
Q 045977 42 PPALPIIGHSYLL---SSKLPESLQTLARRYGPLMQIRIGP-------------STYVVVSNATVAKEIFTT-HDLDFAS 104 (311)
Q Consensus 42 p~~~p~~G~~~~~---~~~~~~~~~~~~~~yG~v~~~~~~~-------------~~~v~v~~p~~i~~i~~~-~~~~~~~ 104 (311)
|...-++.|+..- ..+..+-+.+...+||+|..+.+.. .-.|-..+++.+...... ++..|..
T Consensus 19 ps~vl~L~Nm~~~~el~ddleedl~eef~k~G~V~~v~I~~~~~~~~~~~~~~G~~FV~F~~~e~A~~Ai~~LnGr~f~G 98 (118)
T 3ue2_A 19 ESTVMVLRNMVDPKDIDDDLEGEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAG 98 (118)
T ss_dssp SCCEEEEESCSCGGGCCTTHHHHHHHHHTTTSCEEEEEEEEEEESSSTTCEEEEEEEEEESSHHHHHHHHHHHTTCEETT
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHhccCCEeEEEEeecCCCcccCCcceEEEEEEECCHHHHHHHHHHHCCCEECC
Confidence 3345567777543 3456677777888999988876532 124555688877766643 5555655
Q ss_pred CC
Q 045977 105 RY 106 (311)
Q Consensus 105 ~~ 106 (311)
|.
T Consensus 99 R~ 100 (118)
T 3ue2_A 99 RK 100 (118)
T ss_dssp EE
T ss_pred cE
Confidence 54
No 101
>2jwn_A Embryonic polyadenylate-binding protein 2-B; epabp2, poly(A) binding, structural genomics, protein structure initiative, PSI-2; NMR {Xenopus laevis}
Probab=38.50 E-value=78 Score=20.43 Aligned_cols=54 Identities=13% Similarity=0.216 Sum_probs=35.0
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHhCCccc
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTTHDLDF 102 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~~~~~~ 102 (311)
++||+.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.++..+.-++..+
T Consensus 40 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~l~g~~~ 102 (124)
T 2jwn_A 40 YVGNVDY--GSTAQDLEAHFSSCGSINRITILCDKFSGHPKGYAYIEFAERNSVDAAVAMDETVF 102 (124)
T ss_dssp EEEEECT--TCCHHHHHHHHHTTSCEEEEEEEEECTTSSCEEEEEEEESSHHHHHHHHTTTTCEE
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcccEEEEEECCHHHHHHHHhcCCCeE
Confidence 4566643 22355677888999998877652 123567789998988884343333
No 102
>3ns6_A Eukaryotic translation initiation factor 3 subuni; 1.25A {Saccharomyces cerevisiae} PDB: 3ns5_A
Probab=38.18 E-value=71 Score=19.78 Aligned_cols=52 Identities=15% Similarity=0.264 Sum_probs=35.3
Q ss_pred CCeeccccccC----CChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHH
Q 045977 45 LPIIGHSYLLS----SKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 45 ~p~~G~~~~~~----~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~ 96 (311)
.-++||++... ......+.++..+||+|..+.+. |--.|-..+++.++..+.
T Consensus 8 ~vfV~nLp~v~~~~~~~~~~~L~~~F~~~G~i~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~ 72 (100)
T 3ns6_A 8 YIVVNGAPVIPSAKVPVLKKALTSLFSKAGKVVNMEFPIDEATGKTKGFLFVECGSMNDAKKIIK 72 (100)
T ss_dssp EEEEESCCCCBGGGHHHHHHHHHHHHHTTSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcCChHHHHHHHHHHHHHHHhcCCEeEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 34677776431 12345567788899999888763 234677789988888875
No 103
>3s7r_A Heterogeneous nuclear ribonucleoprotein A/B; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 2.15A {Homo sapiens} PDB: 1hd0_A 1hd1_A
Probab=36.87 E-value=66 Score=19.06 Aligned_cols=52 Identities=10% Similarity=0.227 Sum_probs=35.5
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec-----C----eeEEEEcCHHHHHHHHHhC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-----P----STYVVVSNATVAKEIFTTH 98 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~----~~~v~v~~p~~i~~i~~~~ 98 (311)
.-++||+..- -....+.++..+||+|..+.+. + --.|-..+++.++.++...
T Consensus 13 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~ 73 (87)
T 3s7r_A 13 KMFVGGLSWD--TSKKDLKDYFTKFGEVVDCTIKMDPNTGRSRGFGFILFKDAASVEKVLDQK 73 (87)
T ss_dssp EEEEECCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTTCCEEEEEEEEESSTHHHHHHHHSS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEeecCCCCccccEEEEEECCHHHHHHHHHhC
Confidence 4467887642 2455677888999998887652 1 2356678899888888643
No 104
>1whx_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=35.77 E-value=84 Score=19.95 Aligned_cols=59 Identities=15% Similarity=0.141 Sum_probs=39.1
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec---CeeEEEEcCHHHHHHHHHh-CCcccCCCC
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---PSTYVVVSNATVAKEIFTT-HDLDFASRY 106 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~i~~i~~~-~~~~~~~~~ 106 (311)
-++||+.. .-....+.++..+||+|..+.+. +.-.|...+++.++..+.. +...+..++
T Consensus 13 l~V~nLp~--~~te~~L~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~A~~Ai~~l~g~~~~g~~ 75 (111)
T 1whx_A 13 ILAKNLPA--GTLAAEIQETFSRFGSLGRVLLPEGGITAIVEFLEPLEARKAFRHLAYSKFHHVP 75 (111)
T ss_dssp EEEESCCT--TCCHHHHHHHHHTTSCEEEEECCSSSSCEEEEESCHHHHHHHHHHHTTCBSSSSB
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEeCCCCEEEEEeCCHHHHHHHHHHhCCCEECCeE
Confidence 35677653 23456678888999999888763 3356777888888887753 444444443
No 105
>2la6_A RNA-binding protein FUS; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, RNA recognition; NMR {Homo sapiens}
Probab=35.69 E-value=76 Score=19.44 Aligned_cols=53 Identities=13% Similarity=0.023 Sum_probs=34.2
Q ss_pred CCCCCeeccccccCCChhHHHHHHHHHhCCceE--------Eeec---------CeeEEEEcCHHHHHHHHH
Q 045977 42 PPALPIIGHSYLLSSKLPESLQTLARRYGPLMQ--------IRIG---------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~--------~~~~---------~~~~v~v~~p~~i~~i~~ 96 (311)
|...-++||+..- -..+.+.++..+||.|.. +.+. |--.|...+++.++..+.
T Consensus 12 ~~~~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~~~~~~~~v~i~~~~~~g~~~G~afV~f~~~~~a~~Ai~ 81 (99)
T 2la6_A 12 DNNTIFVQGLGEN--VTIESVADYFKQIGIIKTNKKTGQPMINLYTDRETGKLKGEATVSFDDPPSAKAAID 81 (99)
T ss_dssp CCSEEEEECCCSS--CCHHHHHHHHTTTSCBCEETTTTEESEEEEECTTTCSEEEEEEEEBSSHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHHhCCEeeccccccccEEEEecCCCCCeeeEEEEEECCHHHHHHHHH
Confidence 3334567887542 235567788889998876 5442 123566678888888875
No 106
>4fxv_A ELAV-like protein 1; RNA recognition motif, putative RNA-binding domain, transcri structural genomics, joint center for structural genomics; 1.90A {Homo sapiens}
Probab=35.04 E-value=81 Score=19.54 Aligned_cols=50 Identities=16% Similarity=0.095 Sum_probs=34.2
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec-----C----eeEEEEcCHHHHHHHHHh
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-----P----STYVVVSNATVAKEIFTT 97 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-----~----~~~v~v~~p~~i~~i~~~ 97 (311)
-++||+..- -..+.+.++..+||+|..+.+. + --.|-..+++.+...+..
T Consensus 22 lfV~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~afV~f~~~~~A~~Ai~~ 80 (99)
T 4fxv_A 22 LIVNYLPQN--MTQDELRSLFSSIGEVESAKLIRDKVAGHSLGYGFVNYVTAKDAERAINT 80 (99)
T ss_dssp EEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECSSSCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCCC--CCHHHHHHHHHhcCCEEEeEeeecCCCCcccccEEEEECCHHHHHHHHHH
Confidence 367777642 2355677888999998887653 1 135667899988887753
No 107
>2dgx_A KIAA0430 protein; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=35.02 E-value=78 Score=19.33 Aligned_cols=52 Identities=17% Similarity=0.101 Sum_probs=34.2
Q ss_pred CCeecccccc-C-CChhHHHHHHHHHhCCceEEeec------CeeEEEEcCHHHHHHHHH
Q 045977 45 LPIIGHSYLL-S-SKLPESLQTLARRYGPLMQIRIG------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 45 ~p~~G~~~~~-~-~~~~~~~~~~~~~yG~v~~~~~~------~~~~v~v~~p~~i~~i~~ 96 (311)
--++||+..- . .+....+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 11 ~l~V~nL~~~~~~~~l~~~l~~~F~~~G~v~~v~i~~~~~~rg~afV~f~~~~~A~~Ai~ 70 (96)
T 2dgx_A 11 DVQVSNIDYRLSRKELQQLLQEAFARHGKVKSVELSPHTDYQLKAVVQMENLQDAIGAVN 70 (96)
T ss_dssp EEEEESCCTTSCHHHHHHHHHHHHHHHSCEEEEEECSCCSTTCCEEEEESSHHHHHHHHH
T ss_pred EEEEECCCCCCCHHHHHHHHHHhccccCcEEEEEEEeCCCCCeEEEEEECCHHHHHHHHH
Confidence 3467887643 1 12222334888999999888774 334677788988888876
No 108
>2e5h_A Zinc finger CCHC-type and RNA-binding motif- containing protein 1; RRM domain, RBD, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=34.11 E-value=78 Score=19.06 Aligned_cols=51 Identities=12% Similarity=0.226 Sum_probs=35.9
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHH
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFT 96 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~ 96 (311)
..-++||+.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++.++.
T Consensus 17 ~~l~V~nlp~--~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~ 76 (94)
T 2e5h_A 17 STVYVSNLPF--SLTNNDLYRIFSKYGKVVKVTIMKDKDTRKSKGVAFILFLDKDSAQNCTR 76 (94)
T ss_dssp TSEEEESCCT--TSCHHHHHHHTTTTSCEEEEEECCCSSSCCCTTCEEEEESCHHHHHHHHH
T ss_pred CEEEEECCCC--CCCHHHHHHHHHhcCCeEEEEEEeCCCCCCcccEEEEEECCHHHHHHHHH
Confidence 3456788764 233455778889999998887632 34677789998888885
No 109
>2cq1_A PTB-like protein L; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=33.68 E-value=89 Score=19.59 Aligned_cols=51 Identities=10% Similarity=0.093 Sum_probs=36.2
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeec---CeeEEEEcCHHHHHHHHH
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~i~~i~~ 96 (311)
..-++||+.. .-..+.+.++..+||.|..+.+. |.-.|-..+.+.+...+.
T Consensus 16 ~~l~V~nLp~--~~te~~L~~~F~~fG~v~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (101)
T 2cq1_A 16 RVLHIRKLPG--EVTETEVIALGLPFGKVTNILMLKGKNQAFLELATEEAAITMVN 69 (101)
T ss_dssp SEEEEESCCT--TCCHHHHHHTTTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3457788864 23345677888999999888764 345677788888887775
No 110
>2jvr_A Nucleolar protein 3; RNA recognition motif, nucleus, phosphorylation, ribonucleoprotein, ribosome biogenesis, RNA-binding; NMR {Saccharomyces cerevisiae} PDB: 2osr_A
Probab=33.13 E-value=97 Score=19.86 Aligned_cols=51 Identities=10% Similarity=-0.018 Sum_probs=36.6
Q ss_pred CCeeccccccCCChhHHHHHHHHHhC-CceEEeec-----CeeEEEEcCHHHHHHHHHh
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYG-PLMQIRIG-----PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG-~v~~~~~~-----~~~~v~v~~p~~i~~i~~~ 97 (311)
--++||+.. .-..+.+.++..+|| .|..+.+. |--.|-..+++.++..+..
T Consensus 30 ~l~VgnLp~--~~te~dL~~~F~~~G~~v~~v~i~~~~~rGfaFV~F~~~e~A~~Ai~~ 86 (111)
T 2jvr_A 30 RITMKNLPE--GCSWQDLKDLARENSLETTFSSVNTRDFDGTGALEFPSEEILVEALER 86 (111)
T ss_dssp EEEEECSSC--CCCHHHHHHHHHHHTCCCSEEECSSCSSSCCEEEEESSHHHHHHHHHH
T ss_pred EEEEECCCC--CCCHHHHHHHHHHhCCeeEEEEEEcCCCCCEEEEEECCHHHHHHHHHH
Confidence 346788764 234566788889999 78777663 4457778899988888754
No 111
>2dhg_A TRNA selenocysteine associated protein (SECP43); RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.59 E-value=89 Score=19.28 Aligned_cols=55 Identities=13% Similarity=0.038 Sum_probs=36.9
Q ss_pred CCCCCCeeccccccCCChhHHHHHHHHH-hCCceEEeec--------CeeEEEEcCHHHHHHHHHh
Q 045977 41 SPPALPIIGHSYLLSSKLPESLQTLARR-YGPLMQIRIG--------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 41 gp~~~p~~G~~~~~~~~~~~~~~~~~~~-yG~v~~~~~~--------~~~~v~v~~p~~i~~i~~~ 97 (311)
.|..--++||+..- -..+.+.++..+ ||+|..+.+. +--.|-..+++.+..++..
T Consensus 7 ~~~~~l~V~nLp~~--~t~~~l~~~F~~~~G~v~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 70 (104)
T 2dhg_A 7 GPEYSLFVGDLTPD--VDDGMLYEFFVKVYPSCRGGKVVLDQTGVSKGYGFVKFTDELEQKRALTE 70 (104)
T ss_dssp SCCCCEEEECCCTT--CCHHHHHHHHHHHCTTEEEEEEEECTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred CCCcEEEEeCCCCC--CCHHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHHH
Confidence 34444567887642 234556777788 9998887652 2245667899999888864
No 112
>3ex7_B RNA-binding protein 8A; protein-RNA complex, mRNA processing, mRNA splicing, mRNA transport, nonsense-mediated mRNA decay, nucleus; HET: ADP; 2.30A {Homo sapiens} PDB: 2j0q_D*
Probab=32.50 E-value=1e+02 Score=19.92 Aligned_cols=59 Identities=14% Similarity=0.164 Sum_probs=39.4
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh-CCcccCCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT-HDLDFASR 105 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~-~~~~~~~~ 105 (311)
.-++||+.. .-....+.++..+||+|..+.+. +.-.|...+++.+..++.. +...+..+
T Consensus 24 ~l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 92 (126)
T 3ex7_B 24 ILFVTGVHE--EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEGLNGQDLMGQ 92 (126)
T ss_dssp EEEEESCCT--TCCHHHHHHHHHTTSCEEEEECCBCTTTSSBCSCEEEEESSHHHHHHHHHHHTTCBSSSS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHHhCCCeeCCe
Confidence 346777754 22355677888999999888763 2346778899999888853 44444443
No 113
>2dnz_A Probable RNA-binding protein 23; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.31 E-value=85 Score=18.93 Aligned_cols=59 Identities=14% Similarity=0.270 Sum_probs=38.7
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHHh-CCcccCCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFTT-HDLDFASR 105 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~~-~~~~~~~~ 105 (311)
.-++||+.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.++.++.. +...+..+
T Consensus 7 ~l~v~nlp~--~~t~~~l~~~f~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g~ 75 (95)
T 2dnz_A 7 GLYVGSLHF--NITEDMLRGIFEPFGKIDNIVLMKDSDTGRSKGYGFITFSDSECARRALEQLNGFELAGR 75 (95)
T ss_dssp EEEEESCCT--TCCHHHHHHHHTTTSCEEEEEEECCSSSCCCCSEEEEEESCHHHHHHHHHHHTTCCSSSS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEeecCCCCceeeEEEEEECCHHHHHHHHHHhCCCeeCCc
Confidence 446787754 233555778889999988877632 345667899988888863 44344443
No 114
>2do4_A Squamous cell carcinoma antigen recognized by T- cells 3; RRM domaim, RDB, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=32.21 E-value=89 Score=19.14 Aligned_cols=52 Identities=17% Similarity=0.185 Sum_probs=35.6
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeec--------CeeEEEEcCHHHHHHHHHh
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG--------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~i~~i~~~ 97 (311)
..-++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 18 ~~l~v~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 77 (100)
T 2do4_A 18 HKLFISGLPFS--CTKEELEEICKAHGTVKDLRLVTNRAGKPKGLAYVEYENESQASQAVMK 77 (100)
T ss_dssp SCEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhCCCeEEEEEEECCCCCEEeEEEEEECCHHHHHHHHHH
Confidence 34467877542 2345577888899998887763 2345667899998888854
No 115
>4f25_A Polyadenylate-binding protein 1; RRM fold, translation initiation, RNA-binding, EIF4G-binding translation; 1.90A {Homo sapiens} PDB: 4f26_A 2k8g_A
Probab=31.72 E-value=1e+02 Score=19.66 Aligned_cols=50 Identities=10% Similarity=0.078 Sum_probs=35.3
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec-------CeeEEEEcCHHHHHHHHHh
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~i~~i~~~ 97 (311)
-++||+..- -..+.+.++..+||+|..+.+. |--.|-..+++.++..+..
T Consensus 8 lfV~nLp~~--~te~~L~~~F~~~G~v~~v~i~~d~~~~kg~afV~f~~~~~A~~Ai~~ 64 (115)
T 4f25_A 8 IFIKNLDKS--IDNKALYDTFSAFGNILSCKVVCDENGSKGYGFVHFETQEAAERAIEK 64 (115)
T ss_dssp EEEESCCTT--CCHHHHHHHHGGGSCEEEEEEEEETTEEEEEEEEEESCHHHHHHHHHH
T ss_pred EEECCCCCC--CCHHHHHHHHhccCCEEEEEEeecCCCCCceEEEEECCHHHHHHHHHH
Confidence 467887542 2356677888999998877653 1246777899999888754
No 116
>2cq4_A RNA binding motif protein 23; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=31.69 E-value=99 Score=19.54 Aligned_cols=51 Identities=14% Similarity=0.094 Sum_probs=33.7
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHhCC
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTTHD 99 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~~~ 99 (311)
++||+.. .-....+.++..+||.|..+.+. |.-.|-..+++.++.++.-+.
T Consensus 29 ~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g 88 (114)
T 2cq4_A 29 FCMQLAA--RIRPRDLEDFFSAVGKVRDVRIISDRNSRRSKGIAYVEFCEIQSVPLAIGLTG 88 (114)
T ss_dssp EEESCCT--TCCHHHHHHHHTTTSCEEEEEECCSCCSSSCCCCEEEEESCGGGHHHHHHHTT
T ss_pred EEeCCCC--CCCHHHHHHHHHhCCCEeEEEEEecCCCCccCcEEEEEeCcHHHHHHHHHcCC
Confidence 5676653 22345677888999999888764 224566778888877774343
No 117
>1x4f_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=31.48 E-value=97 Score=20.00 Aligned_cols=54 Identities=9% Similarity=0.080 Sum_probs=36.7
Q ss_pred CCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec---CeeEEEEcCHHHHHHHHH
Q 045977 42 PPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~i~~i~~ 96 (311)
|...-++||+..- .-....+.++..+||+|..+++. +.-.|-..+.+.+...+.
T Consensus 24 p~~~l~V~NLp~~-~~te~~L~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 80 (112)
T 1x4f_A 24 LGRVIHLSNLPHS-GYSDSAVLKLAEPYGKIKNYILMRMKSQAFIEMETREDAMAMVD 80 (112)
T ss_dssp CCCEEEEESCCCS-SCCSHHHHTTTTTTSCCSEEEEETTTTEEEEECSSHHHHHHHHH
T ss_pred CCCEEEEeCCCCc-cCCHHHHHHHHHhcCCEEEEEEecCCCEEEEEECCHHHHHHHHH
Confidence 3344567887641 02345577888999999988874 345677778888877775
No 118
>3bs9_A Nucleolysin TIA-1 isoform P40; RNA recognition motif, RRM, RNA binding domain, RBD, RNA splicing, apoptosis, phosphoprotein, RNA-binding; 1.95A {Homo sapiens}
Probab=31.18 E-value=83 Score=18.51 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=34.6
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHHh
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFTT 97 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~~ 97 (311)
.-++||+.. .-..+.+.++..+||+|..+.+.. --.|-..+++.++..+..
T Consensus 8 ~l~v~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 67 (87)
T 3bs9_A 8 HVFVGDLSP--EITTAAIAAAFAPFGRISDARVVKDMATGKSKGYGFVSFFNKWDAENAIQQ 67 (87)
T ss_dssp EEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEeEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 345777754 233556778889999988876521 235667899988888863
No 119
>2cq3_A RNA-binding protein 9; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.99 E-value=95 Score=19.12 Aligned_cols=52 Identities=12% Similarity=0.121 Sum_probs=36.1
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeec-------CeeEEEEcCHHHHHHHHHh
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~i~~i~~~ 97 (311)
..-++||+..- -....+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 16 ~~l~V~nlp~~--~t~~~l~~~f~~~G~v~~v~i~~~~~~~~g~afV~f~~~~~a~~A~~~ 74 (103)
T 2cq3_A 16 KRLHVSNIPFR--FRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 74 (103)
T ss_dssp CEEEEESCCTT--CCHHHHHHHGGGTSCEEEEEEECCTTTTCCEEEEEESCHHHHHHHHHH
T ss_pred CEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcEEEEEEECCHHHHHHHHHH
Confidence 34467887542 2345577888899999887763 2346777899988888863
No 120
>2voo_A Lupus LA protein; RNA-binding protein, RNA recognition motif, systemic lupus erythematosus, phosphoprotein, RNA maturation; 1.8A {Homo sapiens} SCOP: a.4.5.46 d.58.7.1 PDB: 2von_A 2vod_A 2vop_A 1zh5_A 1yty_A 1s7a_A
Probab=30.42 E-value=1e+02 Score=22.08 Aligned_cols=50 Identities=18% Similarity=0.222 Sum_probs=35.1
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeec--------CeeEEEEcCHHHHHHHHHhC
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIG--------PSTYVVVSNATVAKEIFTTH 98 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~i~~i~~~~ 98 (311)
++|++.. .-....+.++..+||+|..+++. |.-.|-..+++.++.++...
T Consensus 113 ~V~nLp~--~~t~~~L~~~F~~~G~v~~v~i~~~~~~~~kG~aFVeF~~~e~A~~A~~~~ 170 (193)
T 2voo_A 113 YIKGFPT--DATLDDIKEWLEDKGQVLNIQMRRTLHKAFKGSIFVVFDSIESAKKFVETP 170 (193)
T ss_dssp EEECCCT--TCCHHHHHHHHTTSCCEEEEEEEECTTCCEEEEEEEEESSHHHHHHHHHCT
T ss_pred EecCCCC--cCCHHHHHHHHhcCCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHhC
Confidence 5676653 23456778888999998877653 23456678999999988643
No 121
>1rk8_A CG8781-PA, CG8781-PA protein; mRNA processing, RRM, RBD, NMD, oskar mRNA localization, translation; 1.90A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 1hl6_A 2x1g_A
Probab=30.15 E-value=1.4e+02 Score=20.63 Aligned_cols=50 Identities=12% Similarity=0.064 Sum_probs=34.8
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
-++||+.. .-....+.++..+||+|..+.+. |.-+|-..+++.+..++..
T Consensus 75 l~V~nLp~--~~t~~~L~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~~ 133 (165)
T 1rk8_A 75 LFVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKEA 133 (165)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHhhcCCCEEEEEEEecCCCCcEeeEEEEEECCHHHHHHHHHH
Confidence 46777754 23456677888999998887663 2345667888888888753
No 122
>1x4b_A Heterogeneous nuclear ribonucleoproteins A2/B1; structure genomics, RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=30.10 E-value=1.1e+02 Score=19.45 Aligned_cols=52 Identities=17% Similarity=0.221 Sum_probs=35.4
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHHhCC
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFTTHD 99 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~~~~ 99 (311)
-++||+.. .-....+.++..+||+|..+.+.. .-.|-..+++.++.++..+.
T Consensus 30 l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~a~~Ai~~~~ 90 (116)
T 1x4b_A 30 LFIGGLSF--ETTEESLRNYYEQWGKLTDCVVMRDPASKRSRGFGFVTFSSMAEVDAAMAARP 90 (116)
T ss_dssp EEEECCTT--CCCHHHHHHHHTSSCCCSEEEEECCTTTSSCCSEEEEECSSHHHHHHHHTSCS
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCCcCceEEEEeCCHHHHHHHHHhCC
Confidence 35677653 223456778889999988876532 34566689999999886533
No 123
>3v4m_A Splicing factor U2AF 65 kDa subunit; canonical RNA binding protein, RNA splicing, structural GENO joint center for structural genomics, JCSG; HET: MSE; 1.80A {Mus musculus} PDB: 1o0p_A 1opi_A
Probab=30.10 E-value=1.1e+02 Score=19.36 Aligned_cols=47 Identities=19% Similarity=0.313 Sum_probs=30.7
Q ss_pred HHHHHHHHHhCCceEEeec-----------CeeEEEEcCHHHHHHHHHh-CCcccCCCC
Q 045977 60 ESLQTLARRYGPLMQIRIG-----------PSTYVVVSNATVAKEIFTT-HDLDFASRY 106 (311)
Q Consensus 60 ~~~~~~~~~yG~v~~~~~~-----------~~~~v~v~~p~~i~~i~~~-~~~~~~~~~ 106 (311)
+-+.+...+||+|..+.+. |.-.|-..+++.+...... ++..|..|.
T Consensus 30 ~dl~~~f~k~G~V~~v~i~~~~~~~~~~~~G~~fV~f~~~~~A~~Ai~~lnG~~f~GR~ 88 (105)
T 3v4m_A 30 EDVRDECSKYGLVKSIEIPRPVDGVEVPGCGKIFVEFTSVFDCQKAMQGLTGRKFANRV 88 (105)
T ss_dssp HHHHHHHHTTSCEEEEECCCCBTTBCCTTTTEEEEEESSHHHHHHHHHHHTTCEETTEE
T ss_pred HHHHHHHHccCCEEEEEEeccCCCCCcCCcEEEEEEECCHHHHHHHHHHhCCCEeCCCE
Confidence 4456667899999988763 2235666788877776643 555555443
No 124
>3mdf_A Peptidyl-prolyl CIS-trans isomerase E; RRM domain, PHD finger, CYP33, MLL, RNA binding protein, ISO mRNA processing, mRNA splicing, nucleus; 1.85A {Homo sapiens} SCOP: d.58.7.1 PDB: 2kyx_A 3lpy_A*
Probab=29.85 E-value=87 Score=18.31 Aligned_cols=52 Identities=15% Similarity=0.082 Sum_probs=35.7
Q ss_pred CCCCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHH
Q 045977 43 PALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 43 ~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~ 96 (311)
...-++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++..+.
T Consensus 7 ~~~l~V~nl~~~--~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~ 67 (85)
T 3mdf_A 7 KRVLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAID 67 (85)
T ss_dssp SSEEEEECCCTT--CCHHHHHHHHGGGSCEEEEECCEETTTTEECSEEEEEESSHHHHHHHHH
T ss_pred CCEEEEECCCCC--CCHHHHHHHHhccCCEEEEEEEECCCCCccccEEEEEECCHHHHHHHHH
Confidence 334567877542 2346677888999999888762 224677788998888874
No 125
>2hvz_A Splicing factor, arginine/serine-rich 7; RRM, RNA binding protein; NMR {Homo sapiens}
Probab=29.71 E-value=99 Score=18.94 Aligned_cols=48 Identities=19% Similarity=0.248 Sum_probs=33.0
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeec----CeeEEEEcCHHHHHHHHH
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIG----PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~v~v~~p~~i~~i~~ 96 (311)
++||+.. .-..+.+.++..+||+|..+.+. +--.|-..+++.+..++.
T Consensus 4 ~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~A~~ 55 (101)
T 2hvz_A 4 YVGNLGT--GAGKGELERAFSYYGPLRTVWIARNPPGFAFVEFEDPRDAEDAVR 55 (101)
T ss_dssp EEECCCS--SCSHHHHHHHHHHHCCCSEEEEESSSSSEEEEECSSHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeEEEEEeeCCCCEEEEEECCHHHHHHHHH
Confidence 3566543 22355677888999998887763 344666788988888876
No 126
>1whv_A Poly(A)-specific ribonuclease; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, PARN, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1 PDB: 2rok_A*
Probab=29.65 E-value=1.1e+02 Score=19.38 Aligned_cols=38 Identities=16% Similarity=0.233 Sum_probs=29.0
Q ss_pred hHHHHHHHHHhCCceEEeecCe-eEEEEcCHHHHHHHHH
Q 045977 59 PESLQTLARRYGPLMQIRIGPS-TYVVVSNATVAKEIFT 96 (311)
Q Consensus 59 ~~~~~~~~~~yG~v~~~~~~~~-~~v~v~~p~~i~~i~~ 96 (311)
..-+.++...||.|.--|+-.. -.+++.+|+.+++++.
T Consensus 29 t~DI~~lFs~fggv~I~WidDTsAlvvf~~~~~a~~al~ 67 (100)
T 1whv_A 29 TSDLYQLFSAFGNIQISWIDDTSAFVSLSQPEQVQIAVN 67 (100)
T ss_dssp HHHHHHHHTTTCSCCCEEEETTEEEEECSCHHHHHHHHH
T ss_pred hHHHHHHhhccCCEEEEEEcCCeEEEEecCHHHHHHHHH
Confidence 3445667788998877777665 4577789999999986
No 127
>2kxn_B Transformer-2 protein homolog beta; SR protein, RRM, splicing factor, RNA protein complex, SMN, binding protein-RNA complex; NMR {Homo sapiens} PDB: 2rra_A 2rrb_A
Probab=29.07 E-value=1.2e+02 Score=19.85 Aligned_cols=54 Identities=22% Similarity=0.250 Sum_probs=36.8
Q ss_pred CCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 42 PPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
|...-++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 45 ~~~~l~V~nLp~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 107 (129)
T 2kxn_B 45 PNCCLGVFGLSLY--TTERDLREVFSKYGPIADVSIVYDQQSRRSRGFAFVYFENVDDAKEAKER 107 (129)
T ss_dssp CSSCBCEETCTTS--CCHHHHHHHHTTTSCEEEEEEECCSSSSCCCCEEEEEESCHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 3344567877542 2345577888999999888763 2345667899999888863
No 128
>4f02_A Polyadenylate-binding protein 1; mRNA, eukaryotic initiation factors PAIP1 and PAIP2, translation-RNA complex; 2.00A {Homo sapiens} PDB: 1cvj_A*
Probab=28.80 E-value=1.4e+02 Score=21.55 Aligned_cols=55 Identities=22% Similarity=0.225 Sum_probs=36.6
Q ss_pred CCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 41 SPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 41 gp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
.|..--++||+.. .-..+.+.++..+||+|..+.+. |--.|-..+++.+...+..
T Consensus 13 ~p~~tlfVgnLp~--~~te~~L~~~F~~~G~I~~v~i~~d~~tg~~~G~afV~F~~~~~A~~Ai~~ 76 (213)
T 4f02_A 13 YPMASLYVGDLHP--DVTEAMLYEKFSPAGPILSIRVCRDMITRRSLGYAYVNFQQPADAERALDT 76 (213)
T ss_dssp --CCEEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHH
T ss_pred CCCcEEEEeCCCC--CCCHHHHHHHHHhhCCEEEEEEecccCCCCccccccceeCCHHHHHHHHHH
Confidence 3444457888764 22356677888999999887652 1246777899988888754
No 129
>2ywk_A Putative RNA-binding protein 11; RRM-domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.54A {Homo sapiens}
Probab=28.77 E-value=99 Score=18.61 Aligned_cols=50 Identities=18% Similarity=0.175 Sum_probs=34.8
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeecC--------eeEEEEcCHHHHHHHHH
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP--------STYVVVSNATVAKEIFT 96 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~--------~~~v~v~~p~~i~~i~~ 96 (311)
.-++||+..- -..+.+.++..+||+|..+.+.. .-.|-..+++.++.++.
T Consensus 18 ~l~v~nlp~~--~~~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~ 75 (95)
T 2ywk_A 18 TVFVGNLEAR--VREEILYELFLQAGPLTKVTICKDREGKPKSFGFVCFKHPESVSYAIA 75 (95)
T ss_dssp EEEEECCCTT--CCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSTHHHHHHHH
T ss_pred EEEEECCCCC--CCHHHHHHHHHhcCCEEEEEEEECCCCCCceEEEEEECCHHHHHHHHH
Confidence 4467777542 23556778889999988877632 23566788888888876
No 130
>1x5p_A Negative elongation factor E; structure genomics, RRM domain, PARP14, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=27.69 E-value=1.1e+02 Score=18.65 Aligned_cols=50 Identities=10% Similarity=0.167 Sum_probs=35.6
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeec---CeeEEEEcCHHHHHHHHHh
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~i~~i~~~ 97 (311)
.--++||+ . -..+.+.++..+||+|..+.++ +.-.|-..+++.+...+..
T Consensus 16 ~~l~V~n~-~---~t~~~l~~~F~~~G~i~~v~i~~~~g~afV~f~~~~~a~~Ai~~ 68 (97)
T 1x5p_A 16 NTLYVYGE-D---MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAE 68 (97)
T ss_dssp SEEEEECS-S---CCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHHH
T ss_pred CEEEEcCC-C---CCHHHHHHHHhhCCCEEEEEecCCCCEEEEEECCHHHHHHHHHH
Confidence 34467873 2 3456677888999999888875 3446677899988888754
No 131
>2d9p_A Polyadenylate-binding protein 3; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=27.68 E-value=1.1e+02 Score=18.81 Aligned_cols=62 Identities=13% Similarity=0.016 Sum_probs=39.5
Q ss_pred CCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec-------CeeEEEEcCHHHHHHHHHh-CCcccCC
Q 045977 41 SPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-------PSTYVVVSNATVAKEIFTT-HDLDFAS 104 (311)
Q Consensus 41 gp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~i~~i~~~-~~~~~~~ 104 (311)
.+...-++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.+..++.. +...+..
T Consensus 13 ~~~~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~g~~~g~afV~f~~~~~A~~A~~~l~g~~~~g 82 (103)
T 2d9p_A 13 YQVVNLYVKNLDDG--IDDERLRKAFSPFGTITSAKVMMEGGRSKGFGFVCFSSPEEATKAVTEMNGRIVAT 82 (103)
T ss_dssp SSCCCEEEECCCTT--CCHHHHHHTTTTTSCEEEEEEEECSSSEEEEEEEEESSHHHHHHHHHHHTTCBSSS
T ss_pred CCCCEEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEcCCCCcCEEEEEEECCHHHHHHHHHHhCCCEeCC
Confidence 34444567887542 2345567777899998887764 2235667899988888863 4433433
No 132
>1oo0_B CG8781-PA, drosophila Y14; RNA recognition motif, splicing, protein complex, EXON junct complex, signaling protein; 1.85A {Drosophila melanogaster} SCOP: d.58.7.1 PDB: 2hyi_B* 2j0s_D* 2xb2_D*
Probab=27.33 E-value=1.2e+02 Score=18.99 Aligned_cols=49 Identities=12% Similarity=0.061 Sum_probs=35.0
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHH
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~ 96 (311)
-++||+.. .-....+.++..+||+|..+.+. |.-.|-..+++.+..++.
T Consensus 29 l~V~nlp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~Ai~ 86 (110)
T 1oo0_B 29 LFVTSIHE--EAQEDEIQEKFCDYGEIKNIHLNLDRRTGFSKGYALVEYETHKQALAAKE 86 (110)
T ss_dssp EEEESCCT--TCCHHHHHHHHGGGSCEEEEECCBCTTTSSBCSEEEEEESSHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHH
Confidence 46777754 22345577888999999888763 234677789998888876
No 133
>1x4h_A RNA-binding protein 28; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=27.32 E-value=1.2e+02 Score=18.98 Aligned_cols=52 Identities=13% Similarity=0.208 Sum_probs=36.2
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
..-++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.+..++..
T Consensus 16 ~~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~ 76 (111)
T 1x4h_A 16 KTVFIRNLSFD--SEEEALGEVLQQFGDLKYVRVVLHPDTEHSKGCAFAQFMTQEAAQKCLAA 76 (111)
T ss_dssp CCEEEESCCTT--CCHHHHHHHHHTTSCEEEEECCBCSSSCCBCSEEEEEESSHHHHHHHHHH
T ss_pred CEEEEECCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCccEEEEEECCHHHHHHHHHH
Confidence 34567887642 2355577788999999888764 2245667899988888864
No 134
>2dgv_A HnRNP M, heterogeneous nuclear ribonucleoprotein M; RRM domain, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dh9_A
Probab=27.06 E-value=1e+02 Score=18.33 Aligned_cols=58 Identities=10% Similarity=0.069 Sum_probs=37.5
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec-------CeeEEEEcCHHHHHHHHHh-CCcccCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-------PSTYVVVSNATVAKEIFTT-HDLDFAS 104 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~i~~i~~~-~~~~~~~ 104 (311)
.-++||+.. .-..+.+.++..+||+|..+.+. +.-.|-..+++.++.++.. +...+..
T Consensus 10 ~l~V~nlp~--~~t~~~l~~~f~~~G~v~~~~i~~~~g~~~g~afV~f~~~~~a~~a~~~l~g~~~~g 75 (92)
T 2dgv_A 10 QIFVRNLPF--DFTWKMLKDKFNECGHVLYADIKMENGKSKGCGVVKFESPEVAERACRMMNGMKLSG 75 (92)
T ss_dssp EEEECSCCT--TCCHHHHHHHHHTTSCEEEEEEEESSSCEEEEEEEEESSHHHHHHHHHHHTTCCBTT
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEccCCCcceEEEEEECCHHHHHHHHHHhCCCEECC
Confidence 346777754 23456677888999998877653 2235666788888888763 4433433
No 135
>2fy1_A RNA-binding motif protein, Y chromosome, family 1 member A1; RNA binding protein, structure, protein-RNA complex, RNA stem-loop, structural protein/RNA complex; NMR {Homo sapiens}
Probab=26.73 E-value=1.3e+02 Score=19.24 Aligned_cols=59 Identities=14% Similarity=0.184 Sum_probs=38.5
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec--------CeeEEEEcCHHHHHHHHHh-CCcccCCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG--------PSTYVVVSNATVAKEIFTT-HDLDFASR 105 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~i~~i~~~-~~~~~~~~ 105 (311)
.-++||+.. .-..+.+.++..+||+|..+.+. +--.|-..+++.++.++.. ++..+..+
T Consensus 9 ~l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~F~~~~~A~~Ai~~l~g~~~~g~ 76 (116)
T 2fy1_A 9 KLFIGGLNR--ETNEKMLKAVFGKHGPISEVLLIKDRTSKSRGFAFITFENPADAKNAAKDMNGKSLHGK 76 (116)
T ss_dssp EEEEECCTT--TCCHHHHHHHHHTSSCCSEEEEECSTTTTCCCEEEEECSSHHHHHHHHHHCSSCBCSSS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCEEEEEEEECCCCCcccEEEEEECCHHHHHHHHHHhCCCEECCE
Confidence 345777754 23355677888999998887763 2345667899999888864 33334333
No 136
>1whw_A Hypothetical protein riken cDNA 1200009A02; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Mus musculus} SCOP: d.58.7.1
Probab=26.30 E-value=1.1e+02 Score=18.52 Aligned_cols=51 Identities=18% Similarity=0.233 Sum_probs=35.5
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
.-++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 10 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 69 (99)
T 1whw_A 10 RLFVRNLSYT--SSEEDLEKLFSAYGPLSELHYPIDSLTKKPKGFAFVTFMFPEHAVKAYAE 69 (99)
T ss_dssp EEEEECCCTT--CCHHHHHHHHHTTSCEEEEECCCCTTTCCCCSEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEeEEEEEecCCCCCcCeEEEEEECCHHHHHHHHHH
Confidence 3467777542 2345677888999999888763 2346777899999888843
No 137
>3ulh_A THO complex subunit 4; nuclear protein, RNA binding, structural genomi center for structural genomics, JCSG, protein structure INI PSI-biology; 2.54A {Homo sapiens} PDB: 1no8_A
Probab=26.26 E-value=1.2e+02 Score=18.77 Aligned_cols=51 Identities=12% Similarity=0.096 Sum_probs=34.5
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec--------CeeEEEEcCHHHHHHHHHh
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG--------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~i~~i~~~ 97 (311)
.-++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 31 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~A~~~ 89 (107)
T 3ulh_A 31 KLLVSNLDFG--VSDADIQELFAEFGTLKKAAVHYDRSGRSLGTADVHFERKADALKAMKQ 89 (107)
T ss_dssp EEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEECTTSCEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcceEEEEEECCHHHHHHHHHH
Confidence 4467777542 2345577788899998877653 1235667799988888763
No 138
>3r27_A HnRNP L, heterogeneous nuclear ribonucleoprotein L; RBD fold, protein binding, nucleus; 2.04A {Homo sapiens}
Probab=26.19 E-value=1.3e+02 Score=18.99 Aligned_cols=53 Identities=11% Similarity=0.099 Sum_probs=37.6
Q ss_pred CCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec---CeeEEEEcCHHHHHHHHH
Q 045977 42 PPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~i~~i~~ 96 (311)
|...-++||+.. .-....+.++..+||+|..+.+. |.-.|-..+.+.++....
T Consensus 20 ps~~l~V~NLp~--~~te~~L~~lF~~fG~V~~v~i~~~kg~AFVef~~~~~A~~Av~ 75 (100)
T 3r27_A 20 ASPVVHIRGLID--GVVEADLVEALQEFGPISYVVVMPKKRQALVEFEDVLGACNAVN 75 (100)
T ss_dssp CCSEEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CCcEEEEeCCCC--CCCHHHHHHHHhccCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 334567888864 22345677888999999887763 456777788888888775
No 139
>1wi8_A EIF-4B, eukaryotic translation initiation factor 4B; RNA recognition motif, RRM, RNA binding domain, RBD, RNP, structural genomics; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=26.03 E-value=1.2e+02 Score=18.69 Aligned_cols=59 Identities=15% Similarity=0.227 Sum_probs=37.4
Q ss_pred CCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeec----------CeeEEEEcCHHHHHHHHHhCCccc
Q 045977 41 SPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG----------PSTYVVVSNATVAKEIFTTHDLDF 102 (311)
Q Consensus 41 gp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----------~~~~v~v~~p~~i~~i~~~~~~~~ 102 (311)
.|...-++||+..- -..+.+.++..+|| |..+.+. +--.|-..+++.++.++.-+...+
T Consensus 13 ~~~~~l~V~nlp~~--~t~~~l~~~F~~~G-i~~v~i~~~~~~~g~~~g~afV~f~~~~~a~~A~~l~g~~~ 81 (104)
T 1wi8_A 13 SPPYTAFLGNLPYD--VTEESIKEFFRGLN-ISAVRLPREPSNPERLKGFGYAEFEDLDSLLSALSLNEESL 81 (104)
T ss_dssp SSCEEEEEESCCSS--CCHHHHHHHTTTSC-EEEEECCBCSSCTTSBCSCEEEEESSHHHHHHHHGGGTCEE
T ss_pred CCCCEEEEeCCCCc--CCHHHHHHHHHHCC-ceEEEEecCCCCCCCcCeEEEEEECCHHHHHHHHhcCCCEe
Confidence 33344567887542 23455677778999 8887763 124577789999988884344333
No 140
>3ucg_A Polyadenylate-binding protein 2; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: PGE; 1.95A {Homo sapiens} PDB: 3b4d_A 3b4m_A
Probab=25.66 E-value=1.1e+02 Score=18.06 Aligned_cols=54 Identities=15% Similarity=0.182 Sum_probs=34.0
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHHhCCccc
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFTTHDLDF 102 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~~~~~~~ 102 (311)
++||+..- -..+.+.++..+||+|..+.+.. --.|-..+++.++.++.-+...+
T Consensus 10 ~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~g~~~ 72 (89)
T 3ucg_A 10 YVGNVDYG--ATAEELEAHFHGCGSVNRVTILCDKFSGHPKGFAYIEFSDKESVRTSLALDESLF 72 (89)
T ss_dssp EEESCCTT--CCHHHHHHHHGGGCCEEEEEEEESCSSSSCCEEEEEEESSTHHHHHHGGGTTCEE
T ss_pred EEeCCCCC--CCHHHHHHHHHhCCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHhcCCCEE
Confidence 45665432 23455777888999988776531 23566788888888874344333
No 141
>1ghh_A DINI, DNA-damage-inducible protein I; bicelle, dipolar coupling, liquid crystal, PF1, RECA, protein binding; NMR {Escherichia coli} SCOP: d.57.1.1
Probab=25.59 E-value=1.2e+02 Score=18.39 Aligned_cols=38 Identities=16% Similarity=0.187 Sum_probs=27.0
Q ss_pred hHHHHHHHHHhCCc---eEEeecCeeEEEEcCH-----HHHHHHHH
Q 045977 59 PESLQTLARRYGPL---MQIRIGPSTYVVVSNA-----TVAKEIFT 96 (311)
Q Consensus 59 ~~~~~~~~~~yG~v---~~~~~~~~~~v~v~~p-----~~i~~i~~ 96 (311)
.+..+++++.|.++ ++++.++.+.+-|++. +.+.++++
T Consensus 23 ~EL~kRl~~~fpd~~~~V~Vr~~s~n~lsV~g~~k~dKe~i~eiLq 68 (81)
T 1ghh_A 23 GELSRRIQYAFPDNEGHVSVRYAAANNLSVIGATKEDKQRISEILQ 68 (81)
T ss_dssp HHHHHHHHHHCSSSCCEEEEEEESSCEEEEESCCHHHHHHHHHHHH
T ss_pred HHHHHHHHhhCCCCCceEEEeecCCCceeecCCChhHHHHHHHHHH
Confidence 45567888999985 8999888888887443 44555554
No 142
>1uaw_A Mouse-musashi-1; RNP-type structure, RNA binding protein; NMR {Mus musculus} SCOP: d.58.7.1
Probab=25.26 E-value=1e+02 Score=17.54 Aligned_cols=51 Identities=12% Similarity=0.188 Sum_probs=31.3
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHHhCC
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFTTHD 99 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~~~~ 99 (311)
++||+..- -..+.+.++..+||+|..+.+.. --.|-..+++.+...+....
T Consensus 4 ~v~nlp~~--~t~~~l~~~F~~~G~v~~v~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~~~ 63 (77)
T 1uaw_A 4 FIGGLSWQ--TTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQSR 63 (77)
T ss_dssp EEESCCSS--CCSHHHHHHHTTTSCCCCEEEECCCCSSSCSSEEEECCCCTTHHHHHHHTTT
T ss_pred EEeCCCCC--CCHHHHHHHHHhcCCEEEEEEecCCCCCCcCceEEEEEcCHHHHHHHHHhCC
Confidence 45665432 22344677778999887766522 23455578888888876443
No 143
>1l3k_A Heterogeneous nuclear ribonucleoprotein A1; nuclear protein hnRNP A1, RNA-recognition motif, RNA- binding, UP1, RNA binding protein; 1.10A {Homo sapiens} SCOP: d.58.7.1 d.58.7.1 PDB: 1u1k_A* 1u1l_A* 1u1m_A* 1u1n_A* 1u1o_A 1u1p_A* 1u1q_A 1u1r_A* 1pgz_A* 1ha1_A 1po6_A* 2up1_A* 1up1_A
Probab=25.25 E-value=1.8e+02 Score=20.36 Aligned_cols=53 Identities=15% Similarity=0.179 Sum_probs=36.9
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHhCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTTHD 99 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~~~ 99 (311)
--++||+.. .-..+.+.++..+||+|..+.+. |.-.|...+++.+...+..+.
T Consensus 15 ~l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~A~~~~~ 76 (196)
T 1l3k_A 15 KLFIGGLSF--ETTDESLRSHFEQWGTLTDCVVMRDPNTKRSRGFGFVTYATVEEVDAAMNARP 76 (196)
T ss_dssp EEEEESCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTCCEEEEEEEEESSHHHHHHHHHTCS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEEEcCCCCCccceEEEEeCCHHHHHHHHhcCC
Confidence 446788764 22355677888999998776652 134677789999999987543
No 144
>1wg5_A Heterogeneous nuclear ribonucleoprotein H; structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.90 E-value=1.3e+02 Score=18.65 Aligned_cols=59 Identities=8% Similarity=0.117 Sum_probs=38.2
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceE-Eeec--------CeeEEEEcCHHHHHHHHHhCCcccCCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQ-IRIG--------PSTYVVVSNATVAKEIFTTHDLDFASR 105 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~-~~~~--------~~~~v~v~~p~~i~~i~~~~~~~~~~~ 105 (311)
.-++|++.. .-..+.+.++..+||.|.. +.+. |--.|-..+++.++..+..+...+..+
T Consensus 17 ~l~V~nLp~--~~te~~l~~~F~~~G~v~~~v~i~~~~~g~~~G~afV~F~~~~~a~~A~~~~~~~~~gr 84 (104)
T 1wg5_A 17 FVRLRGLPF--GCSKEEIVQFFSGLEIVPNGMTLPVDFQGRSTGEAFVQFASQEIAEKALKKHKERIGHR 84 (104)
T ss_dssp EEEEESCCT--TCCHHHHHHHTTTCCEEEEEEECCBCSSSCBCSEEEEEESSHHHHHHHHTTTTCCSSSS
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCcceeEEEEECCCCCcceEEEEEECCHHHHHHHHHhCcchhCCc
Confidence 446787754 2234557777888998764 4431 335677889999999987654444443
No 145
>2cjk_A Nuclear polyadenylated RNA-binding protein 4; HRP1, RNA-binding, RNA processing, mRNA processing, nonsense-mediated mRNA decay, cleavage; NMR {Saccharomyces cerevisiae} PDB: 2km8_C
Probab=24.70 E-value=1.7e+02 Score=19.82 Aligned_cols=51 Identities=10% Similarity=0.220 Sum_probs=34.5
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHHhCC
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFTTHD 99 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~~~~ 99 (311)
++||+.. .-..+.+.++..+||+|..+.+.. .-.|-..+++.+..++..+.
T Consensus 91 ~V~nlp~--~~t~~~l~~~F~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~~~ 150 (167)
T 2cjk_A 91 FVGGIGP--DVRPKEFEEFFSQWGTIIDAQLMLDKDTGQSRGFGFVTYDSADAVDRVCQNKF 150 (167)
T ss_dssp EEEEECT--TCCHHHHHHHHHTTSCCSEEECCCSSSSSTTSEEEEEEESSHHHHHHHHHCSE
T ss_pred EECCCCC--CCCHHHHHHHHHhCccEEEEEEEEcCCCCccceEEEEEECCHHHHHHHHhCCC
Confidence 4566643 223456777888999988877532 23566789999999887433
No 146
>2x1f_A MRNA 3'-END-processing protein RNA15; transcription-RNA complex, mRNA processing; 1.60A {Saccharomyces cerevisiae} PDB: 2x1b_A 2x1a_A 2km8_B
Probab=24.69 E-value=1.2e+02 Score=18.30 Aligned_cols=49 Identities=10% Similarity=0.256 Sum_probs=33.9
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHH
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~ 96 (311)
-++||+.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.+..++.
T Consensus 5 l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~f~~~~~A~~Ai~ 62 (96)
T 2x1f_A 5 VYLGSIPY--DQTEEQILDLCSNVGPVINLKMMFDPQTGRSKGYAFIEFRDLESSASAVR 62 (96)
T ss_dssp EEEESCCT--TCCHHHHHHHHHTTSCEEEEECCBCTTTCCBCSEEEEEESSHHHHHHHHH
T ss_pred EEEECCCC--CCCHHHHHHHHHhcCCEEEEEEEeCCCCCccceEEEEEECCHHHHHHHHH
Confidence 35676653 22345577888999999888763 234667789998888875
No 147
>3md1_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RBD, RNP, poly(U) binding, nucleus, RNA-binding, binding protein; 1.60A {Saccharomyces cerevisiae} SCOP: d.58.7.0
Probab=24.50 E-value=1.1e+02 Score=17.71 Aligned_cols=49 Identities=10% Similarity=0.178 Sum_probs=32.3
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
++||+.. .-..+.+.++..+||+|..+.+. |--.|-..+++.++..+..
T Consensus 5 ~V~nlp~--~~t~~~l~~~f~~~G~i~~~~i~~~~~~~~~~g~afV~f~~~~~a~~a~~~ 62 (83)
T 3md1_A 5 FVGDLNV--NVDDETLRNAFKDFPSYLSGHVMWDMQTGSSRGYGFVSFTSQDDAQNAMDS 62 (83)
T ss_dssp EEECCCT--TCCHHHHHHHHTTSTTEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHhcCCeeEEEEEEcCCCCCccceEEEEECCHHHHHHHHHH
Confidence 3555543 22345567777899998877653 1236777899998888863
No 148
>1x4d_A Matrin 3; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: d.58.7.1
Probab=24.45 E-value=1.4e+02 Score=18.79 Aligned_cols=55 Identities=13% Similarity=0.071 Sum_probs=38.1
Q ss_pred CCCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecC---eeEEEEcCHHHHHHHHH
Q 045977 41 SPPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---STYVVVSNATVAKEIFT 96 (311)
Q Consensus 41 gp~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---~~~v~v~~p~~i~~i~~ 96 (311)
.|...-++||+..- .-....+.++..+||.|..+++.. .-.|-..+++.+..+..
T Consensus 13 ~p~~~l~V~nLp~~-~~te~dL~~lF~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 70 (102)
T 1x4d_A 13 ETRRVVHIMDFQRG-KNLRYQLLQLVEPFGVISNHLILNKINEAFIEMATTEDAQAAVD 70 (102)
T ss_dssp CCCCEEEEESCCCS-SSHHHHHHTTTGGGSCEEEEEECSSSSCEEEEESSHHHHHHHHH
T ss_pred CCCCEEEEeCCCCC-cCCHHHHHHHHHhcCCEEEEEEEcCCCEEEEEECCHHHHHHHHH
Confidence 34445578888640 223456778889999999888643 35677788888888775
No 149
>2bz2_A Negative elongation factor E; NELF E, RNA recognition motif, alternative splicing, nuclear protein, phosphorylation, repeat, repressor; NMR {Homo sapiens} SCOP: d.58.7.1 PDB: 2jx2_A
Probab=24.45 E-value=1.5e+02 Score=19.20 Aligned_cols=54 Identities=9% Similarity=0.163 Sum_probs=36.3
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec---CeeEEEEcCHHHHHHHHHh-CCccc
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---PSTYVVVSNATVAKEIFTT-HDLDF 102 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~i~~i~~~-~~~~~ 102 (311)
--++||+ . -..+.+.++..+||+|..+.+. +--.|...+++.+...+.. +...+
T Consensus 41 ~lfVgnl-~---~te~~L~~~F~~~G~I~~v~i~~~kg~aFV~f~~~~~A~~Ai~~lng~~~ 98 (121)
T 2bz2_A 41 TLYVYGE-D---MTPTLLRGAFSPFGNIIDLSMDPPRNCAFVTYEKMESADQAVAELNGTQV 98 (121)
T ss_dssp EEEEECS-S---CCHHHHHHHHSTTCCCSCEEEETTTTEEEEECSSHHHHHHHHHHHTTCBC
T ss_pred EEEEcCC-C---CCHHHHHHHHHccCCEEEEEEeCCCCEEEEEECCHHHHHHHHHHhCCCEE
Confidence 3467873 2 3456677888999998887765 3456667888888887753 44333
No 150
>1wf0_A TDP-43, TAR DNA-binding protein-43; structural genomics, RRM domain, riken structural genomics/proteomics initiative RSGI, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=24.33 E-value=93 Score=18.46 Aligned_cols=47 Identities=17% Similarity=0.342 Sum_probs=32.4
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec----CeeEEEEcCHHHHHHH
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG----PSTYVVVSNATVAKEI 94 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~v~v~~p~~i~~i 94 (311)
-++||+..- -..+.+.++..+||+|..+.+. +--.|-..+++.++.+
T Consensus 8 l~V~nLp~~--~te~~l~~~F~~~G~i~~v~i~~~~~g~afV~f~~~~~a~~~ 58 (88)
T 1wf0_A 8 VFVGRCTGD--MTEDELREFFSQYGDVMDVFIPKPFRAFAFVTFADDQIAQSL 58 (88)
T ss_dssp EEEESCCSS--SCHHHHHHHSTTTSCCCEEECCSSCCSCCEEECSCHHHHHHT
T ss_pred EEEeCCCCC--CCHHHHHHHHHHcCCeeEEEEecCCCCEEEEEECCHHHHHHH
Confidence 356777542 2345677788899999888774 3346777888888764
No 151
>2dgs_A DAZ-associated protein 1; RRM domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=23.87 E-value=1.3e+02 Score=18.29 Aligned_cols=59 Identities=8% Similarity=0.121 Sum_probs=39.1
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHhCCcccCCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTTHDLDFASR 105 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~~~~~~~~~ 105 (311)
.-++|++..- -..+.+.++..+||+|..+.+. +--.|-..+++.++.++..+...+..+
T Consensus 12 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~~~~~~~g~ 79 (99)
T 2dgs_A 12 KIFVGGIPHN--CGETELREYFKKFGVVTEVVMIYDAEKQRPRGFGFITFEDEQSVDQAVNMHFHDIMGK 79 (99)
T ss_dssp EEEEESCCSS--CCHHHHHHHHSSSSCEEEEEECCCTTTCSCCSEEEEEESSHHHHHHHHHHCCCBSSSC
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEeCCCCCCCCceEEEEECCHHHHHHHHHhCCCEECCe
Confidence 4467877542 2345577788899999888763 224567789999988886444444433
No 152
>2kfd_A PRE-mRNA-processing protein PRP40; FF domain, mRNA splicing, nucleus, phosphoprotein, ribonucleoprotein, nuclear protein; NMR {Saccharomyces cerevisiae}
Probab=23.81 E-value=97 Score=17.84 Aligned_cols=40 Identities=20% Similarity=0.183 Sum_probs=23.3
Q ss_pred cCCCCCCCCCCC--CCCeecccccc--CCChhHHHHHHHHHhCC
Q 045977 32 FTKSYNFPPSPP--ALPIIGHSYLL--SSKLPESLQTLARRYGP 71 (311)
Q Consensus 32 ~~~~~~~ppgp~--~~p~~G~~~~~--~~~~~~~~~~~~~~yG~ 71 (311)
+....+.-|+|| ..+.++|.+.+ ..+-.....++.+.+-|
T Consensus 25 y~~~~k~kPe~WE~A~~~I~~~~Ey~~l~~E~~v~~qif~~F~P 68 (69)
T 2kfd_A 25 YTKTGKPKPSTWDLASKELGESLEYKALGDEDNIRRQIFEDFKP 68 (69)
T ss_dssp SCSSSSCCCSSHHHHHHHHTTSTTSGGGTTSHHHHHHHHHHHCC
T ss_pred HcccCCCCCccHHHHHHHHccCHHHHHhhccHHHHHHHHHhcCC
Confidence 345545666776 35778888877 23334455556555543
No 153
>3md3_A Nuclear and cytoplasmic polyadenylated RNA-bindin PUB1; RRM, RNP, RBD, poly(U) binding, tandem, acetylation, cytopla nucleus; 2.70A {Saccharomyces cerevisiae}
Probab=23.49 E-value=1.7e+02 Score=19.60 Aligned_cols=48 Identities=17% Similarity=0.193 Sum_probs=32.8
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeec--------CeeEEEEcCHHHHHHHHH
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIG--------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~i~~i~~ 96 (311)
++||+.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.+...+.
T Consensus 4 ~V~nlp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~g~afV~f~~~~~a~~A~~ 59 (166)
T 3md3_A 4 YVGNLDK--AITEDILKQYFQVGGPIANIKIMIDKNNKNVNYAFVEYHQSHDANIALQ 59 (166)
T ss_dssp EEEEEET--TCCHHHHHHHHGGGSCEEEEEEECCCC-CCEEEEEEEESSHHHHHHHHH
T ss_pred EECCCCC--cCCHHHHHHHHHhcCCeEEEEEEECCCCCCCCEEEEEeCCHHHHHHHHH
Confidence 4566543 22345677888999999887763 234677789998888884
No 154
>2jrs_A RNA-binding protein 39; RNA binding motif of RBM39_human (caper), RRM2 domain, solution structure, structural genomics, PSI-2; NMR {Homo sapiens}
Probab=23.41 E-value=1.4e+02 Score=18.67 Aligned_cols=50 Identities=14% Similarity=0.257 Sum_probs=34.6
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHH
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~ 96 (311)
--++||+.. .-....+.++..+||+|..+.+. |.-.|-..+++.+..++.
T Consensus 28 ~l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~g~~~g~afV~F~~~~~A~~Ai~ 86 (108)
T 2jrs_A 28 RLYVGSLHF--NITEDMLRGIFEPFGRIESIQLMMDSETGRSKGYGFITFSDSECAKKALE 86 (108)
T ss_dssp EEEEECCCS--SCCHHHHHHHHTTTSCEEEEEEEEETTTTEEEEEEEEEESCHHHHHHHHH
T ss_pred EEEEeCCCC--CCCHHHHHHHHHhcCCeEEEEEEEcCCCCccceEEEEEECCHHHHHHHHH
Confidence 346787754 23455677888999998877653 233567789999988885
No 155
>1wex_A Hypothetical protein (riken cDNA 2810036L13); structural genomics, RRM domain, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: d.58.7.1
Probab=23.20 E-value=1.5e+02 Score=18.65 Aligned_cols=51 Identities=18% Similarity=0.169 Sum_probs=36.3
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeec---CeeEEEEcCHHHHHHHHH
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---~~~~v~v~~p~~i~~i~~ 96 (311)
..-++||+.. .-....+.++..+||.|..+.+. +.-.|-..+.+.+...+.
T Consensus 16 ~~l~V~nLp~--~~te~~L~~~F~~fG~V~~v~i~~~kg~aFVef~~~~~A~~Ai~ 69 (104)
T 1wex_A 16 PVVHVRGLCE--SVVEADLVEALEKFGTICYVMMMPFKRQALVEFENIDSAKECVT 69 (104)
T ss_dssp SEEEEESCCS--SCCHHHHHHHHTTTSCEEEEEEETTTTEEEEEESSHHHHHHHHH
T ss_pred CEEEEeCCCC--CCCHHHHHHHHHhCCCEEEEEEECCCCEEEEEECCHHHHHHHHH
Confidence 3457788754 23355678888999999888764 345677788888887775
No 156
>3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A*
Probab=23.19 E-value=2.1e+02 Score=23.80 Aligned_cols=51 Identities=10% Similarity=0.171 Sum_probs=35.5
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
.-++||+..- -....+.++..+||+|..+.+. |.-+|...+++.+..++..
T Consensus 104 ~lfV~nL~~~--~te~~L~~~F~~~G~I~~v~i~~d~~tg~~kG~aFV~F~~~e~A~~Ai~~ 163 (437)
T 3pgw_S 104 TLFVARVNYD--TTESKLRREFEVYGPIKRIHMVYSKRSGKPRGYAFIEYEHERDMHSAYKH 163 (437)
T ss_pred EEEEeCCCCC--CCHHHHHHHHHHcCCeeEEEeeccCCCCCccceEEEeeccHHHHHHHHHH
Confidence 4567887542 2345677788899999887763 2346777889888888854
No 157
>2dnq_A RNA-binding protein 4B; RRM domain,RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=22.84 E-value=1.3e+02 Score=17.89 Aligned_cols=51 Identities=18% Similarity=0.277 Sum_probs=35.8
Q ss_pred CCCeeccccccCCChhHHHHHHHHHhCCceEEeec-CeeEEEEcCHHHHHHHHH
Q 045977 44 ALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 44 ~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-~~~~v~v~~p~~i~~i~~ 96 (311)
.--++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.+..++.
T Consensus 9 ~~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~g~afV~f~~~~~A~~A~~ 60 (90)
T 2dnq_A 9 VKLFIGNLPRE--ATEQEIRSLFEQYGKVLECDIIKNYGFVHIEDKTAAEDAIR 60 (90)
T ss_dssp EEEEEESCCSS--CCHHHHHHHHHTSSCEEEEEEETTEEEEEESSHHHHHHHHH
T ss_pred eEEEEeCCCCC--CCHHHHHHHHHhCCCEEEEEEECCEEEEEECCHHHHHHHHH
Confidence 34467877542 2345577888999998887764 345677789998888875
No 158
>4gyx_A Type III collagen fragment in A HOST peptide STAB the cysteine knot; collagen triple helix, type III collagen cysteine knot, BLOO clotting; 1.49A {Homo sapiens}
Probab=22.67 E-value=46 Score=14.94 Aligned_cols=9 Identities=44% Similarity=0.874 Sum_probs=5.1
Q ss_pred CCCCCCCCC
Q 045977 38 FPPSPPALP 46 (311)
Q Consensus 38 ~ppgp~~~p 46 (311)
.||||++-|
T Consensus 4 gppgprgqp 12 (31)
T 4gyx_A 4 GPPGPRGQP 12 (31)
T ss_dssp CCCCCCCCC
T ss_pred CCCCCCCCC
Confidence 455666555
No 159
>2cqb_A Peptidyl-prolyl CIS-trans isomerase E; RNA recognition motif, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=22.55 E-value=1.4e+02 Score=18.22 Aligned_cols=54 Identities=15% Similarity=0.079 Sum_probs=36.1
Q ss_pred CCCCCeeccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHHh
Q 045977 42 PPALPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFTT 97 (311)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~~ 97 (311)
+...-++||+..- -..+.+.++..+||+|..+.+.. .-.|-..+++.+..++..
T Consensus 11 ~~~~l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~ 73 (102)
T 2cqb_A 11 TKRVLYVGGLAEE--VDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 73 (102)
T ss_dssp CCSCEEEESCCSS--CCHHHHHHHHTTTSCCCCEECCCCSSSCCCSSEEEECCSSHHHHHHHHHH
T ss_pred CCCEEEEeCCCCC--CCHHHHHHHhhccCCEEEEEEEecCCCCCcceEEEEEECCHHHHHHHHHH
Confidence 3344567887642 23566778889999988877621 235556788888888753
No 160
>1p1t_A Cleavage stimulation factor, 64 kDa subunit; RNA recognition motif, C-terminal helix, N-terminal helix, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=21.49 E-value=1.5e+02 Score=18.15 Aligned_cols=50 Identities=14% Similarity=0.244 Sum_probs=33.7
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
-++||+.. .-..+.+.++..+||+|..+.+. |.-.|-..+++.+..++..
T Consensus 11 l~V~nlp~--~~~~~~l~~~f~~~G~i~~~~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 69 (104)
T 1p1t_A 11 VFVGNIPY--EATEEQLKDIFSEVGPVVSFRLVYDRETGKPKGYGFCEYQDQETALSAMRN 69 (104)
T ss_dssp EEEESCCT--TSCHHHHHHHHHTTSCCSEEEEEEETTTTEEEEEEEEECSCHHHHHHHHHH
T ss_pred EEEeCCCC--cCCHHHHHHHHHhcCCeeEEEEEeCCCCCccceEEEEEECCHHHHHHHHHH
Confidence 35677653 22345577888899998777653 2235666889999888863
No 161
>1p27_B RNA-binding protein 8A; nuclear protein, mRNA splicing; 2.00A {Homo sapiens} SCOP: d.58.7.1
Probab=21.30 E-value=1.5e+02 Score=18.21 Aligned_cols=50 Identities=14% Similarity=0.123 Sum_probs=34.5
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
-++||+.. .-....+.++..+||+|..+.+. |--.|-..+++.+..++..
T Consensus 26 l~V~nlp~--~~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 84 (106)
T 1p27_B 26 LFVTGVHE--EATEEDIHDKFAEYGEIKNIHLNLDRRTGYLKGYTLVEYETYKEAQAAMEG 84 (106)
T ss_dssp EEEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTTSSEEEEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCCC--CCCHHHHHHHHhccCCeEEEEEEecCCCCceeeEEEEEECCHHHHHHHHHH
Confidence 46777754 22345577888999998887763 2235667889888888763
No 162
>2div_A TRNA selenocysteine associated protein; structural genomics, RRM domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=21.30 E-value=1.5e+02 Score=17.99 Aligned_cols=54 Identities=11% Similarity=0.063 Sum_probs=35.9
Q ss_pred CCCCCeeccccccCCChhHHHHHHHHHhCCce-EEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 42 PPALPIIGHSYLLSSKLPESLQTLARRYGPLM-QIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 42 p~~~p~~G~~~~~~~~~~~~~~~~~~~yG~v~-~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
|..--++||+..- -..+.+.++..+||+|. .+.+. +--.|-..+++.++..+..
T Consensus 8 ~~~~l~V~nLp~~--~t~~~l~~~F~~~G~i~~~v~i~~~~~~g~~~g~afV~f~~~~~a~~A~~~ 71 (99)
T 2div_A 8 MAASLWMGDLEPY--MDENFISRAFATMGETVMSVKIIRNRLTGIPAGYCFVEFADLATAEKCLHK 71 (99)
T ss_dssp SSSEEEECSCCTT--CCHHHHHHHHHHTTCCCCEEEEEECSSSCCEEEEEEEECSCHHHHHHHHHT
T ss_pred CccEEEEeCCCCC--CCHHHHHHHHHHhCCcceEEEEeecCCCCCcCCEEEEEeCCHHHHHHHHHH
Confidence 3334467887642 23556778889999988 76653 1235666899988888863
No 163
>2dnm_A SRP46 splicing factor; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=20.95 E-value=1.5e+02 Score=18.09 Aligned_cols=58 Identities=14% Similarity=0.206 Sum_probs=38.3
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh-CCcccCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT-HDLDFAS 104 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~-~~~~~~~ 104 (311)
.-++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.+..++.. +...+..
T Consensus 15 ~l~V~nLp~~--~t~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~A~~A~~~l~g~~~~g 82 (103)
T 2dnm_A 15 TLKVDNLTYR--TSPDSLRRVFEKYGRVGDVYIPREPHTKAPRGFAFVRFHDRRDAQDAEAAMDGAELDG 82 (103)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEECCBCSSSCSBCSCEEEEESSSSHHHHHHHHHSSCCBTT
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCEEEEEEEeCCCCCCCCeEEEEEECCHHHHHHHHHHcCCCEECC
Confidence 3467887542 2355677888999999888763 2346777888888888763 4433433
No 164
>1x5u_A Splicing factor 3B subunit 4 (spliceosome associated protein 49) (SAP 49) (SF3B50)...; structure genomics,RRM domain,splicing factor 3B; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.76 E-value=1.6e+02 Score=18.11 Aligned_cols=58 Identities=12% Similarity=0.041 Sum_probs=38.9
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeecC---------eeEEEEcCHHHHHHHHHh-CCcccCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---------STYVVVSNATVAKEIFTT-HDLDFAS 104 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---------~~~v~v~~p~~i~~i~~~-~~~~~~~ 104 (311)
.-++||+..- -..+.+.++..+||+|..+.+.. --.|-..+++.++.++.. +...+..
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~l~g~~~~g 84 (105)
T 1x5u_A 17 TVYVGGLDEK--VSEPLLWELFLQAGPVVNTHMPKDRVTGQHQGYGFVEFLSEEDADYAIKIMDMIKLYG 84 (105)
T ss_dssp EEEEECCCTT--CCHHHHHHHHHTTSCEEEEECCBCSSSCSBCSCEEEEESSHHHHHHHHHHSSSCBCSS
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCcCCcEEEEEECCHHHHHHHHHHhCCCeECC
Confidence 3467877542 23556778889999998887632 246777899999998874 3333433
No 165
>2dnh_A Bruno-like 5, RNA binding protein; RRM domain, RBD, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2dnk_A 2dno_A
Probab=20.64 E-value=1.6e+02 Score=18.10 Aligned_cols=50 Identities=16% Similarity=0.166 Sum_probs=34.8
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec--------CeeEEEEcCHHHHHHHHH
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG--------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~i~~i~~ 96 (311)
.-++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++.
T Consensus 17 ~l~v~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~A~~Ai~ 74 (105)
T 2dnh_A 17 KLFVGMLNKQ--QSEEDVLRLFQPFGVIDECTVLRGPDGSSKGCAFVKFSSHTEAQAAIH 74 (105)
T ss_dssp EEEEESCCTT--CCHHHHHHHHTTTSCEEEEEEEECSSSCEEEEEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEECCCCCcCcEEEEEeCCHHHHHHHHH
Confidence 4467887542 2345677888999998887763 223566789998888875
No 166
>1b35_D CRPV, protein (cricket paralysis virus, VP4); insect picorna-like virus, icosahedral virus; 2.40A {Cricket paralysis virus} SCOP: b.121.4.1
Probab=20.62 E-value=37 Score=18.03 Aligned_cols=11 Identities=18% Similarity=0.703 Sum_probs=8.6
Q ss_pred CCCeecccccc
Q 045977 44 ALPIIGHSYLL 54 (311)
Q Consensus 44 ~~p~~G~~~~~ 54 (311)
.+|++||++.-
T Consensus 30 ~ipilgn~fs~ 40 (57)
T 1b35_D 30 HIPVLGNIFST 40 (57)
T ss_dssp CCCCSCCSSSS
T ss_pred ccccccccccc
Confidence 48999998754
No 167
>2err_A Ataxin-2-binding protein 1; protein-RNA complex, RNA binding protein; NMR {Homo sapiens} SCOP: d.58.7.1
Probab=20.54 E-value=1.7e+02 Score=18.34 Aligned_cols=50 Identities=12% Similarity=0.157 Sum_probs=34.1
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec-------CeeEEEEcCHHHHHHHHHh
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG-------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~-------~~~~v~v~~p~~i~~i~~~ 97 (311)
-++|++.. .-..+.+.++..+||+|..+.+. |--.|-..+++.++..+..
T Consensus 32 l~V~nLp~--~~te~~l~~~F~~~G~i~~v~i~~~~~~~kg~afV~f~~~~~A~~Ai~~ 88 (109)
T 2err_A 32 LHVSNIPF--RFRDPDLRQMFGQFGKILDVEIIFNERGSKGFGFVTFENSADADRAREK 88 (109)
T ss_dssp EEEESCCT--TCCHHHHHHHGGGTCCCSCEEECCBTTBCTTEEEEECCCSHHHHHHHHH
T ss_pred EEEECCCC--cCCHHHHHHHHHhcCCEEEEEEEECCCCCceEEEEEECCHHHHHHHHHH
Confidence 35677653 23355677888999998887763 3346667788888887763
No 168
>2cpf_A RNA binding motif protein 19; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.43 E-value=1.5e+02 Score=17.86 Aligned_cols=51 Identities=14% Similarity=0.140 Sum_probs=35.2
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec------------CeeEEEEcCHHHHHHHHHh
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG------------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~------------~~~~v~v~~p~~i~~i~~~ 97 (311)
.-++||+..- -..+.+.++..+||+|..+.+. +.-.|-..+++.++.++..
T Consensus 7 ~l~V~nLp~~--~t~~~l~~~F~~~G~i~~v~i~~~~~~~gt~~~~g~afV~f~~~~~a~~A~~~ 69 (98)
T 2cpf_A 7 GLFIKNLNFS--TTEETLKGVFSKVGAIKSCTISKKKNKAGVLLSMGFGFVEYKKPEQAQKALKQ 69 (98)
T ss_dssp CEEEESCCTT--CCHHHHHHHHHTTSCEEEEEEEEEECTTCCEEEEEEEEEEESSHHHHHHHHHH
T ss_pred EEEEeCCCCC--CCHHHHHHHHHhcCCeEEEEEEecCCCCCCcCcccEEEEEECCHHHHHHHHHH
Confidence 3467777542 3355677888999998877653 1235667899999988874
No 169
>3n9u_C Cleavage and polyadenylation specificity factor S; protein-protein complex, coexpression, heterotetramer, mRNA maturation, mRNA cleavage; 1.92A {Homo sapiens}
Probab=20.42 E-value=2.1e+02 Score=19.52 Aligned_cols=49 Identities=14% Similarity=0.249 Sum_probs=33.4
Q ss_pred eeccccccCCChhHHHHHHHHHhC--CceEEeec-----C----eeEEEEcCHHHHHHHHHh
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYG--PLMQIRIG-----P----STYVVVSNATVAKEIFTT 97 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG--~v~~~~~~-----~----~~~v~v~~p~~i~~i~~~ 97 (311)
++||+.. .-..+.+.++..+|| .|..+.+. + --.|-..+++.+..++..
T Consensus 59 fVgnLp~--~~te~~L~~~F~~~G~i~v~~v~i~~d~~tg~skGfaFV~f~~~~~A~~Ai~~ 118 (156)
T 3n9u_C 59 YVGSFSW--WTTDQQLIQVIRSIGVYDVVELKFAENRANGQSKGYAEVVVASENSVHKLLEL 118 (156)
T ss_dssp EEECCCT--TCCHHHHHHHHHHTTCCCEEEEEEEECTTTCCEEEEEEEEESCHHHHHHHHHH
T ss_pred EEeCCCC--CCCHHHHHHHHHHHCCccEEEEEEEecCCCCccceEEEEEECCHHHHHHHHHH
Confidence 4555543 223456778889999 88887752 1 246777899999988865
No 170
>3tyt_A Heterogeneous nuclear ribonucleoprotein L; ferredoxin-like, structural genomics, joint center for struc genomics, JCSG; 1.60A {Mus musculus} PDB: 3s01_A 3to8_A
Probab=20.30 E-value=2.5e+02 Score=20.24 Aligned_cols=51 Identities=8% Similarity=0.053 Sum_probs=36.1
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeec----CeeEEEEcCHHHHHHHHH
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG----PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~----~~~~v~v~~p~~i~~i~~ 96 (311)
.-++||+... .-..+.+.++..+||+|..+.+. |.-.|...+++.+...+.
T Consensus 6 ~l~V~nL~~~-~~~~~~L~~~F~~~G~v~~v~i~~~~~g~afV~f~~~~~A~~Ai~ 60 (205)
T 3tyt_A 6 VLMVYGLDQS-KMNCDRVFNVFCLYGNVEKVKFMKSKPGAAMVEMADGYAVDRAIT 60 (205)
T ss_dssp EEEEECCCTT-TCCHHHHHHHHTTTSCEEEEEECTTSTTCEEEEESSHHHHHHHHH
T ss_pred EEEEeCCCcc-cCCHHHHHHHHHhcCCeEEEEEecCCCCEEEEEECCHHHHHHHHH
Confidence 4467888621 11234677888999999998764 456788889988888775
No 171
>2cpj_A Non-POU domain-containing octamer-binding protein; RNA recognition motif, RRM, RNP, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: d.58.7.1
Probab=20.29 E-value=1.6e+02 Score=17.91 Aligned_cols=58 Identities=14% Similarity=0.171 Sum_probs=37.6
Q ss_pred CCeeccccccCCChhHHHHHHHHHhCCceEEeecC---eeEEEEcCHHHHHHHHHh-CCcccCC
Q 045977 45 LPIIGHSYLLSSKLPESLQTLARRYGPLMQIRIGP---STYVVVSNATVAKEIFTT-HDLDFAS 104 (311)
Q Consensus 45 ~p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~~---~~~v~v~~p~~i~~i~~~-~~~~~~~ 104 (311)
--++|++..- -..+.+.++..+||+|..+.+.. .-.|-..+++.+..++.. +...+..
T Consensus 17 ~l~V~nlp~~--~t~~~l~~~F~~~G~i~~v~~~~~kg~afV~f~~~~~a~~a~~~l~g~~~~g 78 (99)
T 2cpj_A 17 RLFVGNLPPD--ITEEEMRKLFEKYGKAGEVFIHKDKGFGFIRLETRTLAEIAKVELDNMPLRG 78 (99)
T ss_dssp EEEEESCCTT--CCHHHHHHHTSTTCCCSEEEEETTTTEEEEECSSSHHHHHHHHHHTTCCBTT
T ss_pred EEEEeCCCCC--CCHHHHHHHHhhcCCeEEEEEecCCCEEEEEECCHHHHHHHHHHhCCCEeCC
Confidence 3467887542 23455778889999988887643 345666788888887743 3333433
No 172
>2xs2_A Deleted in azoospermia-like; RNA binding protein-RNA complex; 1.35A {Mus musculus} PDB: 2xs7_A 2xs5_A 2xsf_A
Probab=20.25 E-value=95 Score=19.07 Aligned_cols=49 Identities=16% Similarity=0.267 Sum_probs=32.8
Q ss_pred CeeccccccCCChhHHHHHHHHHhCCceEEeec--------CeeEEEEcCHHHHHHHHH
Q 045977 46 PIIGHSYLLSSKLPESLQTLARRYGPLMQIRIG--------PSTYVVVSNATVAKEIFT 96 (311)
Q Consensus 46 p~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~--------~~~~v~v~~p~~i~~i~~ 96 (311)
-++|++.. .-..+.+.++..+||+|..+.+. |--.|-..+++.++..+.
T Consensus 12 l~V~nLp~--~~t~~~l~~~F~~~G~i~~v~i~~~~~g~~~g~afV~f~~~~~a~~Ai~ 68 (102)
T 2xs2_A 12 VFVGGIDV--RMDETEIRSFFARYGSVKEVKIITDRTGVSKGYGFVSFYNDVDVQKIVE 68 (102)
T ss_dssp EEEECCCT--TCCHHHHHHHHGGGSCEEEEEEEECTTSCEEEEEEEEESSCCCHHHHTT
T ss_pred EEEeCCCC--CCCHHHHHHHHHhCCCeEEEEEEECCCCCccceEEEEECCHHHHHHHHh
Confidence 35677753 22345577788999998887653 223566678888888776
No 173
>2ku7_A MLL1 PHD3-CYP33 RRM chimeric protein; transcriptional regulation, RRM domain, transcr; NMR {Homo sapiens}
Probab=20.23 E-value=1.9e+02 Score=18.88 Aligned_cols=49 Identities=16% Similarity=0.123 Sum_probs=34.0
Q ss_pred eeccccccCCChhHHHHHHHHHhCCceEEeec---------CeeEEEEcCHHHHHHHHHh
Q 045977 47 IIGHSYLLSSKLPESLQTLARRYGPLMQIRIG---------PSTYVVVSNATVAKEIFTT 97 (311)
Q Consensus 47 ~~G~~~~~~~~~~~~~~~~~~~yG~v~~~~~~---------~~~~v~v~~p~~i~~i~~~ 97 (311)
++||+.. .-..+.+.++..+||+|..+.+. |--.|-..+++.++.++..
T Consensus 67 ~v~nlp~--~~~~~~l~~~f~~~G~i~~v~i~~~~~~~~~~g~afV~f~~~~~a~~A~~~ 124 (140)
T 2ku7_A 67 YVGGLAE--EVDDKVLHAAFIPFGDITDIQIPLDYETEKHRGFAFVEFELAEDAAAAIDN 124 (140)
T ss_dssp EEECCCT--TCCHHHHHHHHGGGSCEEEEECCCCTTTCCCCSEEEEEESCHHHHHHHHHH
T ss_pred EEEeCCC--CCCHHHHHHHHHhcCCEEEEEEeecCCCCCcCcEEEEEECCHHHHHHHHHH
Confidence 4666643 22345677888999999888763 2346777899999888853
Done!