BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045986
(148 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9LZV8|ATL74_ARATH RING-H2 finger protein ATL74 OS=Arabidopsis thaliana GN=ATL74 PE=2
SV=1
Length = 159
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/79 (39%), Positives = 42/79 (53%), Gaps = 2/79 (2%)
Query: 66 LWDRPLRHQRVIEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSH 125
+ DR +R ++K P AE G + K +EC ICL EF G+ R+LP C H +H
Sbjct: 74 VADRAGLKKRELKKFPVAEYGSGEV--KIAATECAICLGEFADGERVRVLPPCNHSFHMS 131
Query: 126 CIIRWFSDEFTCPICRSSI 144
CI W +CP CR S+
Sbjct: 132 CIDTWLVSHSSCPNCRHSL 150
>sp|P0C034|ATL10_ARATH RING-H2 finger protein ATL10 OS=Arabidopsis thaliana GN=ATL10 PE=2
SV=1
Length = 251
Score = 64.3 bits (155), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 34/61 (55%)
Query: 82 PAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICR 141
P Y ++ ECVICL +FVSG+ R+LP C H +H CI +W TCP CR
Sbjct: 118 PVVSYSPEMNLPGLDEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQQHLTCPKCR 177
Query: 142 S 142
+
Sbjct: 178 N 178
>sp|Q9LS99|ATL77_ARATH RING-H2 finger protein ATL77 OS=Arabidopsis thaliana GN=ATL77 PE=2
SV=1
Length = 220
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 79 KLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCP 138
K+ P Y ++ ECVICL +FV+G+ R+LP C H +H CI +W + TCP
Sbjct: 110 KMLPVVNYSPEINLPGVGEECVICLSDFVAGEQLRVLPKCNHGFHLRCIDKWLTQHMTCP 169
Query: 139 ICR 141
CR
Sbjct: 170 KCR 172
>sp|Q8LC69|ATL8_ARATH RING-H2 finger protein ATL8 OS=Arabidopsis thaliana GN=ATL8 PE=2
SV=2
Length = 185
Score = 63.5 bits (153), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/159 (28%), Positives = 66/159 (41%), Gaps = 38/159 (23%)
Query: 5 FVIRRLMDLRSNRQAE---------IVLTYTLTIALSLLLLIWVYEICIWARDLYQR--- 52
+ R L + S AE +++ L AL+ ++ + C W R + R
Sbjct: 4 LLFRLLQEANSTSPAEASPPFNSDLVLILAVLLCALTCIIGLIAVSRCAWLRRIASRNRS 63
Query: 53 --MHDPEVGSFDVLRLWDRPLRHQ--RVIEKL------PPAEKYDGHLHNKKFTSECVIC 102
H P V + + + L+ + R + KL PPAEK EC IC
Sbjct: 64 DQTHPPPVAAAN------KGLKKKVLRSLPKLTYSPDSPPAEKL----------VECAIC 107
Query: 103 LEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICR 141
L EF +GD R+LP C H +H CI W +CP CR
Sbjct: 108 LTEFAAGDELRVLPQCGHGFHVSCIDTWLGSHSSCPSCR 146
>sp|Q9LM69|ATL80_ARATH RING-H2 finger protein ATL80 OS=Arabidopsis thaliana GN=ATL80 PE=1
SV=1
Length = 197
Score = 63.2 bits (152), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/132 (29%), Positives = 57/132 (43%), Gaps = 20/132 (15%)
Query: 21 IVLTYTLTIALSLLLLIWVYEICIWARDLY-----------QRMHDPEVGSFDVLRLWDR 69
+V+ L AL +L + C+W R L Q P + L+
Sbjct: 31 VVILAALLCALICVLGLIAVSRCVWLRRLAAGNRTVSGSQTQSPQPPVAAANKGLK---- 86
Query: 70 PLRHQRVIEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIR 129
++V++ LP ++KF +EC ICL EF +GD R+LP C H +H CI
Sbjct: 87 ----KKVLQSLPKLTFSPESPESEKF-AECAICLAEFSAGDELRVLPQCGHGFHVACIDT 141
Query: 130 WFSDEFTCPICR 141
W +CP CR
Sbjct: 142 WLGSHSSCPSCR 153
>sp|Q9XF63|ATL3_ARATH RING-H2 finger protein ATL3 OS=Arabidopsis thaliana GN=ATL3 PE=2
SV=1
Length = 324
Score = 63.2 bits (152), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 30/47 (63%)
Query: 98 ECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
EC ICL E V GD R+LP C H +H CI WF TCPICR+++
Sbjct: 126 ECSICLSELVKGDKARLLPKCNHSFHVECIDMWFQSHSTCPICRNTV 172
>sp|Q8H7N9|ATL31_ORYSJ E3 ubiquitin-protein ligase Os03g0188200 OS=Oryza sativa subsp.
japonica GN=Os03g0188200 PE=2 SV=1
Length = 353
Score = 62.8 bits (151), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 2/73 (2%)
Query: 74 QRVIEKLPPAEKYD--GHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWF 131
+ V+E P A D + K EC +CL EF D R+LP C HV+H CI W
Sbjct: 106 KEVVEAFPTAVYGDVKARMAAKSGPLECAVCLAEFADSDELRVLPACCHVFHPDCIDPWL 165
Query: 132 SDEFTCPICRSSI 144
+ TCP+CR+++
Sbjct: 166 AAAVTCPLCRANL 178
>sp|Q07G42|RNF12_XENTR E3 ubiquitin-protein ligase RNF12 OS=Xenopus tropicalis GN=rnf12
PE=2 SV=1
Length = 639
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 99 CVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
C +C+ E+ G+ R LP C H YH HCI RW S+ TCPICR ++
Sbjct: 585 CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICRRAV 629
>sp|Q9WTV7|RNF12_MOUSE E3 ubiquitin-protein ligase RLIM OS=Mus musculus GN=Rlim PE=1 SV=2
Length = 600
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 99 CVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
C +C+ E+ G+ R LP C H YH HCI RW S+ TCPICR ++
Sbjct: 546 CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICRRAV 590
>sp|Q9NVW2|RNF12_HUMAN E3 ubiquitin-protein ligase RLIM OS=Homo sapiens GN=RLIM PE=1 SV=3
Length = 624
Score = 62.4 bits (150), Expect = 9e-10, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 99 CVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
C +C+ E+ G+ R LP C H YH HCI RW S+ TCPICR ++
Sbjct: 570 CSVCITEYTEGNKLRKLP-CSHEYHVHCIDRWLSENSTCPICRRAV 614
>sp|Q94BY6|ATL75_ARATH RING-H2 finger protein ATL75 OS=Arabidopsis thaliana GN=ATL75 PE=2
SV=1
Length = 226
Score = 62.4 bits (150), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%)
Query: 82 PAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICR 141
P Y ++ ECVICL +FVSG+ R+LP C H +H CI +W TCP CR
Sbjct: 119 PVVSYSPEMNLPGLGEECVICLSDFVSGEQIRMLPKCHHGFHVRCIDKWLQQHLTCPKCR 178
>sp|Q8LGA5|ATL31_ARATH E3 ubiquitin-protein ligase ATL31 OS=Arabidopsis thaliana GN=ATL31
PE=1 SV=2
Length = 368
Score = 62.4 bits (150), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 98 ECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
EC ICL EF + R+LP C HV+H HCI W TCP+CR+++
Sbjct: 123 ECAICLNEFEDDETLRLLPKCDHVFHPHCIGAWLQGHVTCPVCRTNL 169
>sp|Q7T037|RF12B_XENLA E3 ubiquitin-protein ligase RNF12-B OS=Xenopus laevis GN=rnf12-b
PE=2 SV=1
Length = 757
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 99 CVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
C +C+ E+ G+ R LP C H YH HCI RW S+ TCPICR ++
Sbjct: 703 CSVCITEYTEGNKLRKLP-CSHEYHIHCIDRWLSENSTCPICRRAV 747
>sp|Q641J8|RF12A_XENLA E3 ubiquitin-protein ligase RNF12-A OS=Xenopus laevis GN=rnf12-a
PE=1 SV=1
Length = 622
Score = 62.4 bits (150), Expect = 1e-09, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 30/46 (65%), Gaps = 1/46 (2%)
Query: 99 CVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
C +C+ E+ G+ R LP C H YH HCI RW S+ TCPICR ++
Sbjct: 568 CSVCITEYTEGNKLRKLP-CSHEYHIHCIDRWLSENSTCPICRRAV 612
>sp|Q6NML0|ATL76_ARATH E3 ubiquitin-protein ligase ATL76 OS=Arabidopsis thaliana GN=ATL76
PE=1 SV=1
Length = 225
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 33/60 (55%)
Query: 82 PAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICR 141
P Y ++ ECVICL +FVSG+ R+LP C H +H CI +W TCP CR
Sbjct: 118 PVVSYSREMNLPGIGEECVICLSDFVSGEQLRLLPKCNHGFHVRCIDKWLQHHLTCPKCR 177
>sp|O22755|ATL44_ARATH RING-H2 finger protein ATL44 OS=Arabidopsis thaliana GN=ATL44 PE=2
SV=1
Length = 185
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 38/74 (51%), Gaps = 5/74 (6%)
Query: 73 HQRVIEKLP-----PAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCI 127
++ ++ LP AE G + ++EC ICL +F G+ R+LP C H +H CI
Sbjct: 71 KKKALQSLPRSTFTAAESTSGAAAEEGDSTECAICLTDFADGEEIRVLPLCGHSFHVECI 130
Query: 128 IRWFSDEFTCPICR 141
+W +CP CR
Sbjct: 131 DKWLVSRSSCPSCR 144
>sp|Q8RXX9|ATL6_ARATH E3 ubiquitin-protein ligase ATL6 OS=Arabidopsis thaliana GN=ATL6
PE=1 SV=2
Length = 398
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 23/47 (48%), Positives = 30/47 (63%)
Query: 98 ECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
EC ICL EF + R+LP C HV+H HCI W TCP+CR+++
Sbjct: 127 ECAICLNEFEDDETLRLLPKCDHVFHPHCIDAWLEAHVTCPVCRANL 173
>sp|Q8LF65|ATL17_ARATH RING-H2 finger protein ATL17 OS=Arabidopsis thaliana GN=ATL17 PE=2
SV=2
Length = 235
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 31/50 (62%)
Query: 95 FTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
F EC +CL EF + R++P CKH +H HCI WF +CP+CRS I
Sbjct: 72 FAMECSVCLSEFKDNESGRVMPNCKHTFHVHCIDMWFHSHSSCPLCRSQI 121
>sp|Q9Y252|RNF6_HUMAN E3 ubiquitin-protein ligase RNF6 OS=Homo sapiens GN=RNF6 PE=1 SV=1
Length = 685
Score = 60.8 bits (146), Expect = 3e-09, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 5/60 (8%)
Query: 89 HLHNKKFTSE----CVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
H + SE C +C+ ++V+G+ R LP C H +H HCI RW S+ TCPICR +
Sbjct: 618 HYEHNSIDSELGKICSVCISDYVTGNKLRQLP-CMHEFHIHCIDRWLSENCTCPICRQPV 676
>sp|Q7XLY8|ATL41_ORYSJ E3 ubiquitin-protein ligase Os04g0590900 OS=Oryza sativa subsp.
japonica GN=Os04g0590900 PE=2 SV=2
Length = 383
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 4/60 (6%)
Query: 85 KYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
+ DG +H T++C +CL EF G+ R+LP C H +H CI W CP+CR++I
Sbjct: 147 RGDGFVH----TTDCSVCLGEFSDGESLRLLPRCSHAFHQQCIDTWLKSHSNCPLCRANI 202
>sp|Q9FLC6|ATL73_ARATH RING-H2 finger protein ATL73 OS=Arabidopsis thaliana GN=ATL73 PE=2
SV=1
Length = 176
Score = 60.8 bits (146), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)
Query: 79 KLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCP 138
K+ P + Y L K +EC+ICL +FV G+ R+LP C H +H CI W +CP
Sbjct: 95 KVIPVDSYSPELKMK--ATECLICLGDFVEGETVRVLPKCNHGFHVKCIDTWLLSHSSCP 152
Query: 139 ICRSSI 144
CR S+
Sbjct: 153 TCRQSL 158
>sp|Q9DBU5|RNF6_MOUSE E3 ubiquitin-protein ligase RNF6 OS=Mus musculus GN=Rnf6 PE=1 SV=1
Length = 667
Score = 60.5 bits (145), Expect = 4e-09, Method: Composition-based stats.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 13/99 (13%)
Query: 57 EVGSFDVLRLW---------DRPLR--HQRVIEKLPPAEKYDGHLHNKKFTSECVICLEE 105
E G+ +LRL D P+R + I+ L Y+ + + C +C+ +
Sbjct: 562 EAGTLPILRLAHFFLLNEGDDDPIRGLTKEQIDNLS-TRSYEQDGVDSELGKVCSVCISD 620
Query: 106 FVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
+V+G+ R LP C H +H HCI RW S+ TCP+CR +
Sbjct: 621 YVAGNKLRQLP-CLHEFHIHCIDRWLSENCTCPVCRRPV 658
>sp|P0C035|ATL60_ARATH RING-H2 finger protein ATL60 OS=Arabidopsis thaliana GN=ATL60 PE=2
SV=1
Length = 310
Score = 60.5 bits (145), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 30/47 (63%)
Query: 98 ECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
EC +CL + V GD R+LP C H +H CI WF TCP+CR+++
Sbjct: 119 ECAVCLSDLVDGDKARVLPRCNHGFHVDCIDMWFQSHSTCPLCRNTV 165
>sp|Q9M0R6|ATL35_ARATH Putative RING-H2 finger protein ATL35 OS=Arabidopsis thaliana
GN=ATL35 PE=3 SV=1
Length = 302
Score = 60.1 bits (144), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 33/53 (62%)
Query: 94 KFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSIYL 146
K EC ICL EFV + R +P C H +H++CI W S + TCP CR+++ L
Sbjct: 118 KGGVECAICLSEFVDKETLRWMPPCSHTFHANCIDVWLSSQSTCPACRANLSL 170
>sp|Q5M974|RN181_XENTR E3 ubiquitin-protein ligase RNF181 OS=Xenopus tropicalis GN=rnf181
PE=2 SV=1
Length = 156
Score = 59.7 bits (143), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 17/110 (15%)
Query: 46 ARDLYQRMHDPEVGSFDVLRLWDR---PLRHQRVIEKLPP----AEKYDGHLHNKKFTSE 98
AR L M D ++G+ D WD+ P ++V+E LP E+ D L +
Sbjct: 28 ARSLLSGM-DIDLGALDFTE-WDQRLPPPAAKKVVESLPKVTVTPEQADAAL-------K 78
Query: 99 CVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSIYLDA 148
C +CL EF G+ R LP C+H++HS CI+ W +CP+CR + D+
Sbjct: 79 CPVCLLEFEEGETVRQLP-CEHLFHSSCILPWLGKTNSCPLCRHELPTDS 127
>sp|Q9C7I1|ATL34_ARATH RING-H2 finger protein ATL34 OS=Arabidopsis thaliana GN=ATL34 PE=2
SV=1
Length = 327
Score = 59.7 bits (143), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 31/51 (60%)
Query: 94 KFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
K EC ICL EF + R++P C H +H+ CI W S TCP+CR+S+
Sbjct: 123 KGGVECAICLNEFEDEETLRLMPPCSHAFHASCIDVWLSSRSTCPVCRASL 173
>sp|Q9LUL6|ATL61_ARATH Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana
GN=ATL61 PE=3 SV=1
Length = 204
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 30/53 (56%)
Query: 94 KFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSIYL 146
K+ ECV+CL E GD R+LP C H +H CI W TCPICR + L
Sbjct: 83 KYVLECVVCLSELADGDKARVLPSCDHWFHVECIDSWLQSNSTCPICRKRVCL 135
>sp|Q6GPV5|RN181_XENLA E3 ubiquitin-protein ligase RNF181 OS=Xenopus laevis GN=rnf181 PE=2
SV=1
Length = 156
Score = 59.3 bits (142), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 57/110 (51%), Gaps = 17/110 (15%)
Query: 46 ARDLYQRMHDPEVGSFDVLRLWDR---PLRHQRVIEKLPP----AEKYDGHLHNKKFTSE 98
AR L M D ++G+ D WD+ P ++V+E LP E+ D L +
Sbjct: 28 ARSLLSGM-DIDLGAVDFTE-WDQRLPPPASKKVVESLPKVTVTPEQADAAL-------K 78
Query: 99 CVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSIYLDA 148
C +CL EF G+ R LP C+H++HS CI+ W +CP+CR + D+
Sbjct: 79 CPVCLLEFEEGETVRQLP-CEHLFHSACILPWLGKTNSCPLCRHELPTDS 127
>sp|Q9SJJ7|ATL57_ARATH RING-H2 finger protein ATL57 OS=Arabidopsis thaliana GN=ATL57 PE=2
SV=1
Length = 237
Score = 58.9 bits (141), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 93 KKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSS 143
K+ +CVICL +F G+ +++P C HV+H C+ W S TCP+CRS+
Sbjct: 134 KQRNEDCVICLSDFEEGETVKVIPHCGHVFHVDCVDTWLSSYVTCPLCRSN 184
>sp|Q9SL78|ATL12_ARATH Putative RING-H2 finger protein ATL12 OS=Arabidopsis thaliana
GN=ATL12 PE=3 SV=1
Length = 390
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 64/132 (48%), Gaps = 8/132 (6%)
Query: 22 VLTYTLTIALSLLLLIWVYEICIWARDLYQRMHDPEVGSFDVL--RLWDRPLR----HQR 75
++T +I +L ++ VY C + D E D L L++R R ++
Sbjct: 43 IITGVFSIVFTLTFVLLVYAKCFHNDLRSETDSDGERIRHDRLWQGLFNRSSRFSGLDKK 102
Query: 76 VIEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEF 135
IE LP ++ L K EC +CL +F ++ R+LP C+H +H CI +W
Sbjct: 103 AIESLPFF-RFSA-LKGLKQGLECSVCLSKFEDVEILRLLPKCRHAFHIGCIDQWLEQHA 160
Query: 136 TCPICRSSIYLD 147
TCP+CR+ + ++
Sbjct: 161 TCPLCRNRVNIE 172
>sp|Q940Q4|ATL13_ARATH RING-H2 finger protein ATL13 OS=Arabidopsis thaliana GN=ATL13 PE=2
SV=2
Length = 472
Score = 58.5 bits (140), Expect = 1e-08, Method: Composition-based stats.
Identities = 26/68 (38%), Positives = 35/68 (51%), Gaps = 1/68 (1%)
Query: 74 QRVIEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSD 133
Q I+ LP Y + K + +C +CL EF + D R+LP C H +H CI W
Sbjct: 110 QSFIDTLP-VFHYKSIIGLKNYPFDCAVCLCEFETEDKLRLLPKCSHAFHMDCIDTWLLS 168
Query: 134 EFTCPICR 141
TCP+CR
Sbjct: 169 HSTCPLCR 176
>sp|Q7X843|ATL48_ARATH RING-H2 finger protein ATL48 OS=Arabidopsis thaliana GN=ATL48 PE=2
SV=2
Length = 349
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 98 ECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
+C +CL EF D R+LP C H +H HCI W TCP+CR S+
Sbjct: 206 DCAVCLNEFSDTDKLRLLPVCSHAFHLHCIDTWLLSNSTCPLCRRSL 252
>sp|Q9FGJ6|ATL79_ARATH RING-H2 finger protein ATL79 OS=Arabidopsis thaliana GN=ATL79 PE=2
SV=1
Length = 166
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 35/64 (54%)
Query: 82 PAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICR 141
P Y L +EC ICL EF G+ ++L C+H +H CI +W S +CP CR
Sbjct: 90 PTLVYSSDLELAGAEAECAICLSEFEQGESIQVLEKCQHGFHVKCIHKWLSTRSSCPTCR 149
Query: 142 SSIY 145
+SI+
Sbjct: 150 TSIF 153
>sp|Q9SG96|ATL72_ARATH RING-H2 finger protein ATL72 OS=Arabidopsis thaliana GN=ATL72 PE=2
SV=1
Length = 181
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 82 PAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICR 141
P Y + + K T EC+ICL +F G+ R+LP C H +H CI W +CP CR
Sbjct: 98 PVGLYGSGIIDMKAT-ECLICLGDFEDGEKVRVLPKCNHGFHVRCIDTWLLSRSSCPTCR 156
Query: 142 SSIYLD 147
S+ L+
Sbjct: 157 QSLLLE 162
>sp|Q9M0R5|ATL36_ARATH Putative RING-H2 finger protein ATL36 OS=Arabidopsis thaliana
GN=ATL36 PE=3 SV=1
Length = 345
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 48/94 (51%), Gaps = 5/94 (5%)
Query: 57 EVGSF--DVLRLWDRPLRHQRVIEKLPP--AEKYDGHLHNKKFTSECVICLEEFVSGDLF 112
E+G+ DVL R + VIE P + G L K EC ICL EF +
Sbjct: 78 EIGAAGQDVLHSRARRGLEKEVIESFPTFLYSEVKG-LKIGKGGVECAICLSEFEDQETL 136
Query: 113 RILPFCKHVYHSHCIIRWFSDEFTCPICRSSIYL 146
R +P C H +H++CI W S TCP+CR+++ L
Sbjct: 137 RWMPPCSHTFHANCIDVWLSSWSTCPVCRANLSL 170
>sp|Q9ZT49|ATL45_ARATH RING-H2 finger protein ATL45 OS=Arabidopsis thaliana GN=ATL45 PE=2
SV=1
Length = 200
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 29/46 (63%)
Query: 96 TSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICR 141
++EC IC+ EF G+ RILP C H +H CI +W + +CP CR
Sbjct: 110 STECAICITEFSEGEEIRILPLCSHAFHVACIDKWLTSRSSCPSCR 155
>sp|P93823|ATL1_ARATH RING-H2 finger protein ATL1 OS=Arabidopsis thaliana GN=ATL1 PE=2
SV=1
Length = 381
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 88 GHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSIYLD 147
G K + EC +CL EF + RI+P C HV+H CI W CP+CR+S+ +
Sbjct: 123 GEEDQSKNSQECSVCLNEFQEDEKLRIIPNCCHVFHIDCIDIWLQGNANCPLCRTSVSCE 182
Query: 148 A 148
A
Sbjct: 183 A 183
>sp|Q8L9T5|ATL2_ARATH RING-H2 finger protein ATL2 OS=Arabidopsis thaliana GN=ATL2 PE=2
SV=2
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 28/45 (62%)
Query: 98 ECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRS 142
EC +CL EF + R+LP C+H +H CI WF TCP+CRS
Sbjct: 118 ECAVCLSEFEESETGRVLPNCQHTFHVDCIDMWFHSHSTCPLCRS 162
>sp|P0CH30|RING1_GOSHI E3 ubiquitin-protein ligase RING1 OS=Gossypium hirsutum GN=RING1
PE=2 SV=1
Length = 338
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 68/151 (45%), Gaps = 15/151 (9%)
Query: 1 DETLFVIRRLMDLRSNR-QAEIVLTYTLT-IALSLLLLIWVYEICIWARDLYQRM--HDP 56
D F+ L DLRS+ Q E V+ + L I Y I L Q++ +DP
Sbjct: 132 DPFTFIQNHLNDLRSSGAQIEFVIQNNPSDQGFRLPANIGDYFIGPGLEQLIQQLAENDP 191
Query: 57 EVGSFDVLRLWDRPLRHQRVIEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILP 116
+ P + IE LP +L N +F ++C +C+++F G + +P
Sbjct: 192 --------NRYGTPPASKSAIEALPLVNITKSNL-NSEF-NQCAVCMDDFEEGTEAKQMP 241
Query: 117 FCKHVYHSHCIIRWFSDEFTCPICRSSIYLD 147
CKH+YH C++ W +CP+CR + D
Sbjct: 242 -CKHLYHKDCLLPWLELHNSCPVCRHELPTD 271
>sp|Q5SSZ7|ZNRF3_MOUSE E3 ubiquitin-protein ligase ZNRF3 OS=Mus musculus GN=Znrf3 PE=2
SV=1
Length = 913
Score = 57.4 bits (137), Expect = 3e-08, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 96 TSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSI 144
TS+C ICLE+++ G+ R++P C H +H C+ W TCP CR +I
Sbjct: 287 TSDCAICLEKYIDGEELRVIP-CTHRFHRKCVDPWLLQHHTCPHCRHNI 334
>sp|Q9M0R4|ATL37_ARATH Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana
GN=ATL37 PE=3 SV=1
Length = 357
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 5/99 (5%)
Query: 53 MHDPEVGSFDVLRLWDRPLRHQRVIEKLPP---AEKYDGHLHNKKFTSECVICLEEFVSG 109
+ + E G +VL R + VIE P +E + N EC ICL EF
Sbjct: 73 IEENETGGHEVLHSRVRRGIDKDVIESFPAFLYSEVKAFKIGNGGV--ECAICLCEFEDE 130
Query: 110 DLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSIYLDA 148
+ R +P C H +H++CI W S TCP+CR+++ L +
Sbjct: 131 EPLRWMPPCSHTFHANCIDEWLSSRSTCPVCRANLSLKS 169
>sp|Q9ZV51|ATL56_ARATH RING-H2 finger protein ATL56 OS=Arabidopsis thaliana GN=ATL56 PE=2
SV=1
Length = 181
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 1/73 (1%)
Query: 74 QRVIEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSD 133
R ++KLP K+ ++ S+CV+C + F G R LP C HV+H C+ W
Sbjct: 86 SRFVKKLPQF-KFSEPSTYTRYESDCVVCFDGFRQGQWCRNLPGCGHVFHRKCVDTWLLK 144
Query: 134 EFTCPICRSSIYL 146
TCPICR+ + L
Sbjct: 145 ASTCPICRARVRL 157
>sp|Q9FL07|ATL46_ARATH RING-H2 finger protein ATL46 OS=Arabidopsis thaliana GN=ATL46 PE=2
SV=1
Length = 376
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 29/48 (60%)
Query: 98 ECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICRSSIY 145
+C +CL EF D R+LP C H +H +CI W TCP+CR +++
Sbjct: 142 DCAVCLCEFSEKDKLRLLPMCSHAFHLNCIDTWLQSNSTCPLCRGTLF 189
>sp|Q9Y3C5|RNF11_HUMAN RING finger protein 11 OS=Homo sapiens GN=RNF11 PE=1 SV=1
Length = 154
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 76 VIEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEF 135
+I+ LP G ++K ECVIC+ +FV GD R LP C H+YH CI W F
Sbjct: 76 LIQHLPKGVYDPGRDGSEKKIRECVICMMDFVYGDPIRFLP-CMHIYHLDCIDDWLMRSF 134
Query: 136 TCPICRSSI 144
TCP C +
Sbjct: 135 TCPSCMEPV 143
>sp|Q08DI6|RNF11_BOVIN RING finger protein 11 OS=Bos taurus GN=RNF11 PE=2 SV=1
Length = 154
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 76 VIEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEF 135
+I+ LP G ++K ECVIC+ +FV GD R LP C H+YH CI W F
Sbjct: 76 LIQHLPKGVYDPGRDGSEKKIRECVICMMDFVYGDPIRFLP-CMHIYHLDCIDDWLMRSF 134
Query: 136 TCPICRSSI 144
TCP C +
Sbjct: 135 TCPSCMEPV 143
>sp|Q9QYK7|RNF11_MOUSE RING finger protein 11 OS=Mus musculus GN=Rnf11 PE=1 SV=1
Length = 154
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 37/69 (53%), Gaps = 1/69 (1%)
Query: 76 VIEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEF 135
+I+ LP G ++K ECVIC+ +FV GD R LP C H+YH CI W F
Sbjct: 76 LIQHLPKGVYDPGRDGSEKKIRECVICMMDFVYGDPIRFLP-CMHIYHLDCIDDWLMRSF 134
Query: 136 TCPICRSSI 144
TCP C +
Sbjct: 135 TCPSCMEPV 143
>sp|Q9H0F5|RNF38_HUMAN RING finger protein 38 OS=Homo sapiens GN=RNF38 PE=1 SV=4
Length = 515
Score = 56.6 bits (135), Expect = 5e-08, Method: Composition-based stats.
Identities = 26/66 (39%), Positives = 42/66 (63%), Gaps = 3/66 (4%)
Query: 77 IEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFT 136
IE+LP + +++ + H + T CV+C+ +F S L R+LP C H +H+ C+ +W T
Sbjct: 443 IEQLP-SYRFNPNNHQSEQTL-CVVCMCDFESRQLLRVLP-CNHEFHAKCVDKWLKANRT 499
Query: 137 CPICRS 142
CPICR+
Sbjct: 500 CPICRA 505
>sp|Q9LZJ6|ATL5_ARATH RING-H2 finger protein ATL5 OS=Arabidopsis thaliana GN=ATL5 PE=2
SV=1
Length = 257
Score = 56.6 bits (135), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%), Gaps = 2/69 (2%)
Query: 76 VIEKLPPAEKYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEF 135
V+EK+P Y H EC +CL EF D R+LP C HV+H CI WF
Sbjct: 92 VLEKIP-IFVYSVKTHESPL-EECSVCLSEFEEDDEGRVLPKCGHVFHVDCIDTWFRSRS 149
Query: 136 TCPICRSSI 144
+CP+CR+ +
Sbjct: 150 SCPLCRAPV 158
>sp|Q6NQG7|ATL78_ARATH RING-H2 finger protein ATL78 OS=Arabidopsis thaliana GN=ATL78 PE=2
SV=1
Length = 219
Score = 56.6 bits (135), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 32/57 (56%)
Query: 85 KYDGHLHNKKFTSECVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFSDEFTCPICR 141
Y L+ +EC ICL EFV+ + ++LP C H +H CI +W S +CP CR
Sbjct: 117 SYSTELNLPGLDTECAICLSEFVAEERVKLLPTCHHGFHVRCIDKWLSSHSSCPTCR 173
>sp|Q8L649|BB_ARATH E3 ubiquitin ligase BIG BROTHER OS=Arabidopsis thaliana GN=BB PE=1
SV=1
Length = 248
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 2/73 (2%)
Query: 74 QRVIEKLPPAEKYDGHLHNKKFTSE-CVICLEEFVSGDLFRILPFCKHVYHSHCIIRWFS 132
Q +IE LP + G + ++K E CVIC ++ G+ LP CKHVYHS CI +W S
Sbjct: 171 QELIETLPTKKYKFGSIFSRKRAGERCVICQLKYKIGERQMNLP-CKHVYHSECISKWLS 229
Query: 133 DEFTCPICRSSIY 145
CP+C S ++
Sbjct: 230 INKVCPVCNSEVF 242
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.331 0.144 0.482
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 55,982,783
Number of Sequences: 539616
Number of extensions: 2205562
Number of successful extensions: 6038
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 323
Number of HSP's successfully gapped in prelim test: 176
Number of HSP's that attempted gapping in prelim test: 5553
Number of HSP's gapped (non-prelim): 521
length of query: 148
length of database: 191,569,459
effective HSP length: 106
effective length of query: 42
effective length of database: 134,370,163
effective search space: 5643546846
effective search space used: 5643546846
T: 11
A: 40
X1: 15 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.9 bits)
S2: 55 (25.8 bits)