BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045988
(530 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1WBP|A Chain A, Srpk1 Bound To 9mer Docking Motif Peptide
pdb|1WAK|A Chain A, X-Ray Structure Of Srpk1
Length = 397
Score = 236 bits (603), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 134/167 (80%)
Query: 300 AVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
A LK K+ D GNACW +K FT DIQTRQYR EVL+GS Y+TPAD+WS AC+ FELATG
Sbjct: 230 AEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 289
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWP 419
D LF+PHSG+ Y RDEDH+AL++ELLG +PRK+ G+YS++FF + GDL+HI +L+ W
Sbjct: 290 DYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG 349
Query: 420 LNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
L +VL+EKY++S+++A DFL+P+L+ +PEKR TAA+CL HPW+N
Sbjct: 350 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 396
Score = 202 bits (515), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/192 (53%), Positives = 134/192 (69%), Gaps = 10/192 (5%)
Query: 18 EDEGTEDYRRGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKS 77
E E DY +GGYH V++GD F NGRY V KLGWGHFSTVWL+WD Q +VA+KV KS
Sbjct: 14 EQEDPNDYCKGGYHLVKIGDLF-NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKS 72
Query: 78 AQHYTEAALDEIKILKQIAEGDPDD--KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLL 135
A+HYTE ALDEI++LK + DP+D ++ VV+LLD FK SG NG H+CMVFE LG +LL
Sbjct: 73 AEHYTETALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLL 132
Query: 136 TLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLM-------SMID 188
I ++Y+G+PL VK+I +L GLD+LH + IIHTD+KPEN+LL +
Sbjct: 133 KWIIKSNYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAA 192
Query: 189 PSKDPRKSGPPP 200
+ + ++SG PP
Sbjct: 193 EATEWQRSGAPP 204
>pdb|3BEG|A Chain A, Crystal Structure Of Sr Protein Kinase 1 Complexed To Its
Substrate AsfSF2
Length = 381
Score = 236 bits (602), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 101/167 (60%), Positives = 134/167 (80%)
Query: 300 AVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
A LK K+ D GNACW +K FT DIQTRQYR EVL+GS Y+TPAD+WS AC+ FELATG
Sbjct: 214 AEKLKVKIADLGNACWVHKHFTEDIQTRQYRSLEVLIGSGYNTPADIWSTACMAFELATG 273
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWP 419
D LF+PHSG+ Y RDEDH+AL++ELLG +PRK+ G+YS++FF + GDL+HI +L+ W
Sbjct: 274 DYLFEPHSGEEYTRDEDHIALIIELLGKVPRKLIVAGKYSKEFFTKKGDLKHITKLKPWG 333
Query: 420 LNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
L +VL+EKY++S+++A DFL+P+L+ +PEKR TAA+CL HPW+N
Sbjct: 334 LFEVLVEKYEWSQEEAAGFTDFLLPMLELIPEKRATAAECLRHPWLN 380
Score = 201 bits (510), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 101/186 (54%), Positives = 132/186 (70%), Gaps = 10/186 (5%)
Query: 24 DYRRGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTE 83
DY +GGYH V++GD F NGRY V KLGWGHFSTVWL+WD Q +VA+KV KSA+HYTE
Sbjct: 4 DYCKGGYHLVKIGDLF-NGRYHVIRKLGWGHFSTVWLSWDIQGKKFVAMKVVKSAEHYTE 62
Query: 84 AALDEIKILKQIAEGDPDD--KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYA 141
ALDEI++LK + DP+D ++ VV+LLD FK SG NG H+CMVFE LG +LL I +
Sbjct: 63 TALDEIRLLKSVRNSDPNDPNREMVVQLLDDFKISGVNGTHICMVFEVLGHHLLKWIIKS 122
Query: 142 DYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLM-------SMIDPSKDPR 194
+Y+G+PL VK+I +L GLD+LH + IIHTD+KPEN+LL + + + +
Sbjct: 123 NYQGLPLPCVKKIIQQVLQGLDYLHTKCRIIHTDIKPENILLSVNEQYIRRLAAEATEWQ 182
Query: 195 KSGPPP 200
+SG PP
Sbjct: 183 RSGAPP 188
>pdb|2X7G|A Chain A, Structure Of Human Serine-Arginine-Rich Protein-Specific
Kinase 2 (Srpk2) Bound To Purvalanol B
Length = 389
Score = 230 bits (587), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 99/164 (60%), Positives = 128/164 (78%)
Query: 303 LKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
++ K+ D GNACW +K FT DIQTRQYR EVL+G+ YSTPAD+WS AC+ FELATGD L
Sbjct: 225 IRVKIADLGNACWVHKHFTEDIQTRQYRSIEVLIGAGYSTPADIWSTACMAFELATGDYL 284
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNK 422
F+PHSG++Y RDEDH+A ++ELLG +PR A G+YSR+FFNR G+LRHI +L+ W L
Sbjct: 285 FEPHSGEDYSRDEDHIAHIIELLGSIPRHFALSGKYSREFFNRRGELRHITKLKPWSLFD 344
Query: 423 VLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
VL+EKY + +DA DFL+P+L+ VPEKR +A +CL HPW+N
Sbjct: 345 VLVEKYGWPHEDAAQFTDFLIPMLEMVPEKRASAGECLRHPWLN 388
Score = 204 bits (518), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/192 (55%), Positives = 131/192 (68%), Gaps = 10/192 (5%)
Query: 18 EDEGTEDYRRGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKS 77
E E DY +GGYH V++GD F NGRY V KLGWGHFSTVWL WD Q +VA+KV KS
Sbjct: 8 EQEDPADYCKGGYHPVKIGDLF-NGRYHVIRKLGWGHFSTVWLCWDMQGKRFVAMKVVKS 66
Query: 78 AQHYTEAALDEIKILKQIAEGDPDD--KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLL 135
AQHYTE ALDEIK+LK + E DP D K VV+L+D FK SG NG HVCMVFE LG +LL
Sbjct: 67 AQHYTETALDEIKLLKCVRESDPSDPNKDMVVQLIDDFKISGMNGIHVCMVFEVLGHHLL 126
Query: 136 TLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLM-------SMID 188
I ++Y+G+P+ VK I +L GLD+LH + IIHTD+KPEN+L+ M
Sbjct: 127 KWIIKSNYQGLPVRCVKSIIRQVLQGLDYLHSKCKIIHTDIKPENILMCVDDAYVRRMAA 186
Query: 189 PSKDPRKSGPPP 200
+ + +K+G PP
Sbjct: 187 EATEWQKAGAPP 198
>pdb|1Q8Y|A Chain A, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Y|B Chain B, The Structure Of The Yeast Sr Protein Kinase, Sky1p, With
Bound Adp
pdb|1Q8Z|A Chain A, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q8Z|B Chain B, The Apoenzyme Structure Of The Yeast Sr Protein Kinase,
Sky1p
pdb|1Q97|A Chain A, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q97|B Chain B, The Structure Of The Saccharomyces Cerevisiae Sr Protein
Kinase, Sky1p, With Bound Atp
pdb|1Q99|A Chain A, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
pdb|1Q99|B Chain B, Crystal Structure Of The Saccharomyces Cerevisiae Sr
Protein Kinsae, Sky1p, Complexed With The
Non-Hydrolyzable Atp Analogue, Amp-Pnp
Length = 373
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 114/163 (69%)
Query: 303 LKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
++ K+ D GNACW + +TN IQTR+YR PEVLLG+ + AD+WS AC+ FEL TGD L
Sbjct: 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNK 422
F+P G +Y +D+DH+A ++ELLG +P + G+Y+R FFN G LR+I +L+FWPL
Sbjct: 235 FEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLED 294
Query: 423 VLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
VL EKY FS+ +A +++DFL P+L P KR A + HPW+
Sbjct: 295 VLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
Score = 184 bits (466), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 121/170 (71%), Gaps = 6/170 (3%)
Query: 24 DYRRGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTE 83
DYR GGYH G+ +K+ RY++ KLGWGHFSTVWLA D + +VA+K+ + + YTE
Sbjct: 1 DYRPGGYHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 84 AALDEIKILKQIAEGDPDDKKC-----VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLI 138
AA DEIK+L+++ + D + ++KLLDHF H GPNG HV MVFE LGENLL LI
Sbjct: 61 AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 120
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
K ++RG+PL VK+I +L+GLD++HR IIHTD+KPENV LM ++D
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV-LMEIVD 169
>pdb|1HOW|A Chain A, The X-Ray Crystal Structure Of Sky1p, An Sr Protein Kinase
In Yeast
pdb|2JD5|A Chain A, Sky1p Bound To Npl3p-Derived Substrate Peptide
pdb|2JD5|B Chain B, Sky1p Bound To Npl3p-Derived Substrate Peptide
Length = 373
Score = 188 bits (478), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 82/163 (50%), Positives = 114/163 (69%)
Query: 303 LKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
++ K+ D GNACW + +TN IQTR+YR PEVLLG+ + AD+WS AC+ FEL TGD L
Sbjct: 175 IQIKIADLGNACWYDEHYTNSIQTREYRSPEVLLGAPWGCGADIWSTACLIFELITGDFL 234
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNK 422
F+P G +Y +D+DH+A ++ELLG +P + G+Y+R FFN G LR+I +L+FWPL
Sbjct: 235 FEPDEGHSYTKDDDHIAQIIELLGELPSYLLRNGKYTRTFFNSRGLLRNISKLKFWPLED 294
Query: 423 VLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
VL EKY FS+ +A +++DFL P+L P KR A + HPW+
Sbjct: 295 VLTEKYKFSKDEAKEISDFLSPMLQLDPRKRADAGGLVNHPWL 337
Score = 182 bits (463), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 121/170 (71%), Gaps = 6/170 (3%)
Query: 24 DYRRGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTE 83
DYR GG+H G+ +K+ RY++ KLGWGHFSTVWLA D + +VA+K+ + + YTE
Sbjct: 1 DYRPGGFHPAFKGEPYKDARYILVRKLGWGHFSTVWLAKDMVNNTHVAMKIVRGDKVYTE 60
Query: 84 AALDEIKILKQIAEGDPDDKKC-----VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLI 138
AA DEIK+L+++ + D + ++KLLDHF H GPNG HV MVFE LGENLL LI
Sbjct: 61 AAEDEIKLLQRVNDADNTKEDSMGANHILKLLDHFNHKGPNGVHVVMVFEVLGENLLALI 120
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
K ++RG+PL VK+I +L+GLD++HR IIHTD+KPENV LM ++D
Sbjct: 121 KKYEHRGIPLIYVKQISKQLLLGLDYMHRRCGIIHTDIKPENV-LMEIVD 169
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 96.3 bits (238), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDD 102
RY V +G G F V A+D + +VALK+ ++ + + A +EI+IL+ + + D D+
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
V+ +L++F H+CM FE L NL LIK ++G L +V++ IL L
Sbjct: 158 TMNVIHMLENFTFR----NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 163 DHLHRELSIIHTDLKPENVLL 183
D LH+ IIH DLKPEN+LL
Sbjct: 214 DALHKN-RIIHCDLKPENILL 233
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 31/181 (17%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
K++DFG++C+ +++ IQ+R YR PEV+LG++Y P D+WS CI EL TG L
Sbjct: 242 KVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL-- 299
Query: 366 HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIR------------ 413
G++ + D LA M+ELLGM +K+ + +++F + G R+
Sbjct: 300 -PGED---EGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLN 355
Query: 414 -------RLRFWPLNKVLIEKYDFSEKDAND--MADFLVPILDFVPEKRPTAAQCLTHPW 464
+LR P ++ ++ + K +D DFL L++ P R T Q L HPW
Sbjct: 356 GGRSRRGKLRGPPESR----EWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPW 411
Query: 465 I 465
+
Sbjct: 412 L 412
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 95.9 bits (237), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDD 102
RY V +G G F V A+D + +VALK+ ++ + + A +EI+IL+ + + D D+
Sbjct: 98 RYEVLKVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
V+ +L++F H+CM FE L NL LIK ++G L +V++ IL L
Sbjct: 158 TMNVIHMLENFTFR----NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 163 DHLHRELSIIHTDLKPENVLL 183
D LH+ IIH DLKPEN+LL
Sbjct: 214 DALHKN-RIIHCDLKPENILL 233
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 31/181 (17%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
K++DFG++C+ +++ IQ+R YR PEV+LG++Y P D+WS CI EL TG L
Sbjct: 242 KVIDFGSSCYEHQRVYXXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL-- 299
Query: 366 HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIR------------ 413
G++ + D LA M+ELLGM +K+ + +++F + G R+
Sbjct: 300 -PGED---EGDQLACMIELLGMPXQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLN 355
Query: 414 -------RLRFWPLNKVLIEKYDFSEKDAND--MADFLVPILDFVPEKRPTAAQCLTHPW 464
+LR P ++ ++ + K +D DFL L++ P R T Q L HPW
Sbjct: 356 GGRSRRGKLRGPPESR----EWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPW 411
Query: 465 I 465
+
Sbjct: 412 L 412
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 95.5 bits (236), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 54/141 (38%), Positives = 81/141 (57%), Gaps = 5/141 (3%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDD 102
RY V +G G F V A+D + +VALK+ ++ + + A +EI+IL+ + + D D+
Sbjct: 98 RYEVLKVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDN 157
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
V+ +L++F H+CM FE L NL LIK ++G L +V++ IL L
Sbjct: 158 TMNVIHMLENFTFR----NHICMTFELLSMNLYELIKKNKFQGFSLPLVRKFAHSILQCL 213
Query: 163 DHLHRELSIIHTDLKPENVLL 183
D LH+ IIH DLKPEN+LL
Sbjct: 214 DALHKN-RIIHCDLKPENILL 233
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 58/181 (32%), Positives = 93/181 (51%), Gaps = 31/181 (17%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
K++DFG++C+ +++ IQ+R YR PEV+LG++Y P D+WS CI EL TG L
Sbjct: 242 KVIDFGSSCYEHQRVYTXIQSRFYRAPEVILGARYGMPIDMWSLGCILAELLTGYPLL-- 299
Query: 366 HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIR------------ 413
G++ + D LA M+ELLGM +K+ + +++F + G R+
Sbjct: 300 -PGED---EGDQLACMIELLGMPSQKLLDASKRAKNFVSXKGYPRYCTVTTLSDGSVVLN 355
Query: 414 -------RLRFWPLNKVLIEKYDFSEKDAND--MADFLVPILDFVPEKRPTAAQCLTHPW 464
+LR P ++ ++ + K +D DFL L++ P R T Q L HPW
Sbjct: 356 GGRSRRGKLRGPPESR----EWGNALKGCDDPLFLDFLKQCLEWDPAVRMTPGQALRHPW 411
Query: 465 I 465
+
Sbjct: 412 L 412
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 92.0 bits (227), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 87/158 (55%), Gaps = 7/158 (4%)
Query: 29 GYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD 87
G+ +GD + RY + S LG G F V D + VALK+ K+ + Y EAA
Sbjct: 21 GHLIYHVGDWLQE-RYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAARL 79
Query: 88 EIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVP 147
EI +L++I E DPD+K V++ D F + G H+C+ FE LG + +K +Y P
Sbjct: 80 EINVLEKINEKDPDNKNLCVQMFDWFDYHG----HMCISFELLGLSTFDFLKDNNYLPYP 135
Query: 148 LHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+H V+ + F + + LH + + HTDLKPEN+L ++
Sbjct: 136 IHQVRHMAFQLCQAVKFLH-DNKLTHTDLKPENILFVN 172
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 84/162 (51%), Gaps = 8/162 (4%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
++VDFG+A + ++ + + TR YR PEV+L +S P D+WS CI FE G LF
Sbjct: 196 RVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTLFQT 255
Query: 366 HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL-RHIRRLRFWPLNKVL 424
H + +HLA+M +LG +P ++ R + F+ D + R+ N
Sbjct: 256 HD------NREHLAMMERILGPIPSRMIRKTRKQKYFYRGRLDWDENTSAGRYVRENCKP 309
Query: 425 IEKYDFSE-KDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
+ +Y SE ++ + + D + +L++ P KR T + L HP+
Sbjct: 310 LRRYLTSEAEEHHQLFDLIESMLEYEPAKRLTLGEALQHPFF 351
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 88.6 bits (218), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 40 KNG-----RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQ 94
KNG RY + S +G G F V A+D +VA+K+ K+ + + A E+++L+
Sbjct: 28 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLEL 87
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ + D + K +V L HF H+C+VFE L NL L++ ++RGV L++ ++
Sbjct: 88 MNKHDTEMKYYIVHLKRHFMFR----NHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 143
Query: 155 CFHILVGLDHLHR-ELSIIHTDLKPENVLL 183
+ L L ELSIIH DLKPEN+LL
Sbjct: 144 AQQMCTALLFLATPELSIIHCDLKPENILL 173
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
K+VDFG++C ++ IQ+R YR PEVLLG Y D+WS CI E+ TG+ LF
Sbjct: 182 KIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF-- 239
Query: 366 HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGD 408
SG N + D + ++E+LG+ P I +R FF + D
Sbjct: 240 -SGAN---EVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPD 278
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 40 KNG-----RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQ 94
KNG RY + S +G G F V A+D +VA+K+ K+ + + A E+++L+
Sbjct: 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLEL 106
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ + D + K +V L HF H+C+VFE L NL L++ ++RGV L++ ++
Sbjct: 107 MNKHDTEMKYYIVHLKRHFMFR----NHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 162
Query: 155 CFHILVGLDHLHR-ELSIIHTDLKPENVLL 183
+ L L ELSIIH DLKPEN+LL
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILL 192
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
K+VDFG++C ++ IQ+R YR PEVLLG Y D+WS CI E+ TG+ LF
Sbjct: 201 KIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF-- 258
Query: 366 HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGD 408
SG N + D + ++E+LG+ P I +R FF + D
Sbjct: 259 -SGAN---EVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPD 297
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 88.2 bits (217), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 54/150 (36%), Positives = 83/150 (55%), Gaps = 10/150 (6%)
Query: 40 KNG-----RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQ 94
KNG RY + S +G G F V A+D +VA+K+ K+ + + A E+++L+
Sbjct: 47 KNGEKWMDRYEIDSLIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLEL 106
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ + D + K +V L HF H+C+VFE L NL L++ ++RGV L++ ++
Sbjct: 107 MNKHDTEMKYYIVHLKRHFMFR----NHLCLVFEMLSYNLYDLLRNTNFRGVSLNLTRKF 162
Query: 155 CFHILVGLDHLHR-ELSIIHTDLKPENVLL 183
+ L L ELSIIH DLKPEN+LL
Sbjct: 163 AQQMCTALLFLATPELSIIHCDLKPENILL 192
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
K+VDFG++C ++ IQ+R YR PEVLLG Y D+WS CI E+ TG+ LF
Sbjct: 201 KIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPYDLAIDMWSLGCILVEMHTGEPLF-- 258
Query: 366 HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGD 408
SG N + D + ++E+LG+ P I +R FF + D
Sbjct: 259 -SGAN---EVDQMNKIVEVLGIPPAHILDQAPKARKFFEKLPD 297
>pdb|2EXE|A Chain A, Crystal Structure Of The Phosphorylated Clk3
Length = 357
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 27 RGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWD-TQTSHYVALKVQKSAQHYTEAA 85
+ G+ R+GD + RY + LG G F V D + VALK+ ++ Y EAA
Sbjct: 14 KEGHLVCRIGDWLQE-RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA 72
Query: 86 LDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRG 145
EI +LK+I E D ++K V + D F G H+C+ FE LG+N +K +++
Sbjct: 73 RLEINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQP 128
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
PL V+ + + + L LH E + HTDLKPEN+L ++
Sbjct: 129 YPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVN 167
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
++ DFG+A + ++ T + TR YR PEV+L ++ P D+WS CI FE G LF
Sbjct: 191 RVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 250
Query: 366 HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFN-------RHGDLRHIRRLRFW 418
H + +HL +M ++LG +P + R + F+ D R+++
Sbjct: 251 HE------NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE-NCK 303
Query: 419 PLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
PL +++ + + D + +L+F P +R T A+ L HP+
Sbjct: 304 PLKSYMLQ----DSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 346
>pdb|2WU6|A Chain A, Crystal Structure Of The Human Clk3 In Complex With Dki
pdb|2WU7|A Chain A, Crystal Structure Of The Human Clk3 In Complex With V25
pdb|3RAW|A Chain A, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
pdb|3RAW|B Chain B, Crystal Structure Of Human Cdc-Like Kinase 3 Isoform In
Complex With Leucettine L41
Length = 381
Score = 86.3 bits (212), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/158 (35%), Positives = 84/158 (53%), Gaps = 7/158 (4%)
Query: 29 GYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWD-TQTSHYVALKVQKSAQHYTEAALD 87
G+ R+GD + RY + LG G F V D + VALK+ ++ Y EAA
Sbjct: 39 GHLVCRIGDWLQE-RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAARL 97
Query: 88 EIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVP 147
EI +LK+I E D ++K V + D F G H+C+ FE LG+N +K +++ P
Sbjct: 98 EINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQPYP 153
Query: 148 LHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
L V+ + + + L LH E + HTDLKPEN+L ++
Sbjct: 154 LPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVN 190
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
++ DFG+A + ++ T + TR YR PEV+L ++ P D+WS CI FE G LF
Sbjct: 214 RVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 273
Query: 366 HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFN-------RHGDLRHIRRLRFW 418
H + +HL +M ++LG +P + R + F+ D R+++
Sbjct: 274 HE------NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE-NCK 326
Query: 419 PLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
PL +++ + + D + +L+F P +R T A+ L HP+
Sbjct: 327 PLKSYMLQ----DSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 369
>pdb|2EU9|A Chain A, Crystal Structure Of Clk3
Length = 355
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 85/160 (53%), Gaps = 7/160 (4%)
Query: 27 RGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWD-TQTSHYVALKVQKSAQHYTEAA 85
+ G+ R+GD + RY + LG G F V D + VALK+ ++ Y EAA
Sbjct: 5 KEGHLVCRIGDWLQE-RYEIVGNLGEGTFGKVVECLDHARGKSQVALKIIRNVGKYREAA 63
Query: 86 LDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRG 145
EI +LK+I E D ++K V + D F G H+C+ FE LG+N +K +++
Sbjct: 64 RLEINVLKKIKEKDKENKFLCVLMSDWFNFHG----HMCIAFELLGKNTFEFLKENNFQP 119
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
PL V+ + + + L LH E + HTDLKPEN+L ++
Sbjct: 120 YPLPHVRHMAYQLCHALRFLH-ENQLTHTDLKPENILFVN 158
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 47/167 (28%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
++ DFG+A + ++ T + TR YR PEV+L ++ P D+WS CI FE G LF
Sbjct: 182 RVADFGSATFDHEHHTTIVATRHYRPPEVILELGWAQPCDVWSIGCILFEYYRGFTLFQT 241
Query: 366 HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFN-------RHGDLRHIRRLRFW 418
H + +HL +M ++LG +P + R + F+ D R+++
Sbjct: 242 HE------NREHLVMMEKILGPIPSHMIHRTRKQKYFYKGGLVWDENSSDGRYVKE-NCK 294
Query: 419 PLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
PL +++ + + D + +L+F P +R T A+ L HP+
Sbjct: 295 PLKSYMLQ----DSLEHVQLFDLMRRMLEFDPAQRITLAEALLHPFF 337
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 79.7 bits (195), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 36 GDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALDEIKILKQ 94
GD + RY + LG G F V D + +VA+K+ K+ Y EAA EI++L+
Sbjct: 9 GDVL-SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEH 67
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ DP+ V++L+ F+H G H+C+VFE LG + IK + L ++++
Sbjct: 68 LNTTDPNSTFRCVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRKM 123
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLLM 184
+ I ++ LH + HTDLKPEN+L +
Sbjct: 124 AYQICKSVNFLHSN-KLTHTDLKPENILFV 152
Score = 77.8 bits (190), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 99/208 (47%), Gaps = 27/208 (12%)
Query: 267 QNGSLIKNEATSNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQT 326
+N ++++ T E N KR R+ ++ K+VDFG+A + + + + T
Sbjct: 147 ENILFVQSDYT--EAYNPKIKRDERT-------LINPDIKVVDFGSATYDDEHHSTLVST 197
Query: 327 RQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLG 386
R YR PEV+L +S P D+WS CI E G +F H ++HLA+M +LG
Sbjct: 198 RHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS------KEHLAMMERILG 251
Query: 387 MMPRKIAFGGRYSRDFFNRHGDL-------RHIRRLRFWPLNKVLIEKYDFSEKDANDMA 439
+P+ + R + F + D R++ R PL + ++ + + + +
Sbjct: 252 PLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSR-ACKPLKEFMLSQ----DVEHERLF 306
Query: 440 DFLVPILDFVPEKRPTAAQCLTHPWINV 467
D + +L++ P KR T + L HP+ ++
Sbjct: 307 DLIQKMLEYDPAKRITLREALKHPFFDL 334
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 80/150 (53%), Gaps = 7/150 (4%)
Query: 36 GDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALDEIKILKQ 94
GD + RY + LG G F V D + +VA+K+ K+ Y EAA EI++L+
Sbjct: 9 GDVL-SARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEH 67
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ DP+ V++L+ F+H G H+C+VFE LG + IK + L ++++
Sbjct: 68 LNTTDPNSTFRCVQMLEWFEHHG----HICIVFELLGLSTYDFIKENGFLPFRLDHIRKM 123
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLLM 184
+ I ++ LH + HTDLKPEN+L +
Sbjct: 124 AYQICKSVNFLHSN-KLTHTDLKPENILFV 152
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 98/210 (46%), Gaps = 25/210 (11%)
Query: 265 DQQNGSLIKNEATSNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDI 324
D + +++ ++ E N KR R+ ++ K+VDFG+A + + + +
Sbjct: 143 DLKPENILFVQSDYTEAYNPKIKRDERT-------LINPDIKVVDFGSATYDDEHHSTLV 195
Query: 325 QTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMEL 384
R YR PEV+L +S P D+WS CI E G +F H ++HLA+M +
Sbjct: 196 XXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLGFTVFPTHDS------KEHLAMMERI 249
Query: 385 LGMMPRKIAFGGRYSRDFFNRHGDL-------RHIRRLRFWPLNKVLIEKYDFSEKDAND 437
LG +P+ + R + F + D R++ R PL + ++ + + +
Sbjct: 250 LGPLPKHMIQKTRKRKYFHHDRLDWDEHSSAGRYVSR-ACKPLKEFMLSQ----DVEHER 304
Query: 438 MADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ D + +L++ P KR T + L HP+ ++
Sbjct: 305 LFDLIQKMLEYDPAKRITLREALKHPFFDL 334
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 79/143 (55%), Gaps = 6/143 (4%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDP 100
N ++V K+G G F V L Y A+KV ++ + YT +A E ILK+I + D
Sbjct: 34 NNAFLVIRKMGDGTFGRVLLCQHIDNKKYYAVKVVRNIKKYTRSAKIEADILKKI-QNDD 92
Query: 101 DDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILV 160
+ +VK F + H+C++FE LG +L +I +Y G + +K C IL
Sbjct: 93 INNNNIVKYHGKFMYY----DHMCLIFEPLGPSLYEIITRNNYNGFHIEDIKLYCIEILK 148
Query: 161 GLDHLHRELSIIHTDLKPENVLL 183
L++L R++S+ HTDLKPEN+LL
Sbjct: 149 ALNYL-RKMSLTHTDLKPENILL 170
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 93/194 (47%), Gaps = 32/194 (16%)
Query: 287 KRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADL 346
+R + ++ ++ KL+DFG A + + I TRQYR PEV+L + +D+
Sbjct: 183 RRVTDGKKIQIYRTKSTGIKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDM 242
Query: 347 WSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAF------GGRY-S 399
WSF C+ EL TG +LF H +HLA+M ++ +P+ + + G +Y +
Sbjct: 243 WSFGCVLAELYTGSLLFRTH------EHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVN 296
Query: 400 RDFF--------NRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPE 451
+D + ++H+++ PL K++ K++ DFL IL P
Sbjct: 297 KDELKLAWPENASSINSIKHVKKC--LPLYKII--KHEL-------FCDFLYSILQIDPT 345
Query: 452 KRPTAAQCLTHPWI 465
RP+ A+ L H ++
Sbjct: 346 LRPSPAELLKHKFL 359
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAE 97
RY +++G G + TV+ A D + H+VALK V + + + E+ +L+++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL-- 60
Query: 98 GDPDDKKCVVKLLDHFKHSGPNGQ-HVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICF 156
+ + VV+L+D S + + V +VFE++ ++L T + A G+P +K++
Sbjct: 61 -EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
L GLD LH I+H DLKPEN+L+ S
Sbjct: 120 QFLRGLDFLHAN-CIVHRDLKPENILVTS 147
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 73/166 (43%), Gaps = 27/166 (16%)
Query: 305 CKLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL DFG A Q D + T YR PEVLL S Y+TP D+WS CI E+ L
Sbjct: 151 VKLADFGLARIYSYQMALDPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 210
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLRFWPL 420
F +S + D L + +L+G+ P + RD G R R P+
Sbjct: 211 FCGNS------EADQLGKIFDLIGLPPED-----DWPRDVSLPRGAFPPRGPR-----PV 254
Query: 421 NKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
V+ E + A L+ +L F P KR +A + L H +++
Sbjct: 255 QSVVPEMEESG-------AQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/166 (33%), Positives = 82/166 (49%), Gaps = 18/166 (10%)
Query: 304 KCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATG 359
+ KL DFG A F++++ T YR P+VL+GS+ YST D+WS CI E+ TG
Sbjct: 146 QLKLGDFGLARAFGIPVNTFSSEVVTLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITG 205
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWP 419
LF G N DE+ L L+ +++G P + + +N + R R LR
Sbjct: 206 KPLF---PGTN---DEEQLKLIFDIMG-TPNESLWPSVTKLPKYNPNIQQRPPRDLR--- 255
Query: 420 LNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
+++ + D N M DFL +L P+ R +A Q L HPW
Sbjct: 256 ---QVLQPHTKEPLDGNLM-DFLHGLLQLNPDMRLSAKQALHHPWF 297
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 73/144 (50%), Gaps = 23/144 (15%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALKVQK--SAQHYTEAALDEIKILKQIAEGDPDDKKCV 106
KLG G ++TV+ + T YVALK K S + A+ EI ++K++ + +
Sbjct: 12 KLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELKHEN------I 65
Query: 107 VKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADY-------RGVPLHMVKEICFHIL 159
V+L D + +VFE++ + L KY D RG+ L++VK + +L
Sbjct: 66 VRLYDVIHTE----NKLTLVFEFMDND---LKKYMDSRTVGNTPRGLELNLVKYFQWQLL 118
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
GL H E I+H DLKP+N+L+
Sbjct: 119 QGLAFCH-ENKILHRDLKPQNLLI 141
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAE 97
RY +++G G + TV+ A D + H+VALK V + + + E+ +L+++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL-- 60
Query: 98 GDPDDKKCVVKLLDHFKHSGPNGQ-HVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICF 156
+ + VV+L+D S + + V +VFE++ ++L T + A G+P +K++
Sbjct: 61 -EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
L GLD LH I+H DLKPEN+L+ S
Sbjct: 120 QFLRGLDFLHAN-CIVHRDLKPENILVTS 147
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 305 CKLVDFGNA-CWTYKQ-FTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL DFG A ++Y+ + T YR PEVLL S Y+TP D+WS CI E+ L
Sbjct: 151 VKLADFGLARIYSYQMALAPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 210
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLRFWPL 420
F +S + D L + +L+G+ P + RD G R R P+
Sbjct: 211 FCGNS------EADQLGKIFDLIGLPPED-----DWPRDVSLPRGAFPPRGPR-----PV 254
Query: 421 NKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
V+ E + A L+ +L F P KR +A + L H +++
Sbjct: 255 QSVVPEMEESG-------AQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 8/149 (5%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAE 97
RY +++G G + TV+ A D + H+VALK V + + + E+ +L+++
Sbjct: 3 TSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRL-- 60
Query: 98 GDPDDKKCVVKLLDHFKHSGPNGQ-HVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICF 156
+ + VV+L+D S + + V +VFE++ ++L T + A G+P +K++
Sbjct: 61 -EAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKDLMR 119
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
L GLD LH I+H DLKPEN+L+ S
Sbjct: 120 QFLRGLDFLHAN-CIVHRDLKPENILVTS 147
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 75/166 (45%), Gaps = 27/166 (16%)
Query: 305 CKLVDFGNA-CWTYKQ-FTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL DFG A ++Y+ + T YR PEVLL S Y+TP D+WS CI E+ L
Sbjct: 151 VKLADFGLARIYSYQMALFPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 210
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLRFWPL 420
F +S + D L + +L+G+ P + RD G R R P+
Sbjct: 211 FCGNS------EADQLGKIFDLIGLPPED-----DWPRDVSLPRGAFPPRGPR-----PV 254
Query: 421 NKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
V+ E + A L+ +L F P KR +A + L H +++
Sbjct: 255 QSVVPEMEESG-------AQLLLEMLTFNPHKRISAFRALQHSYLH 293
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 68.6 bits (166), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 78/152 (51%), Gaps = 5/152 (3%)
Query: 38 TFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIA- 96
+ RY +++G G + TV+ A D + H+VALK + I ++++A
Sbjct: 5 SMATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVAL 64
Query: 97 --EGDPDDKKCVVKLLDHFKHSGPNGQ-HVCMVFEYLGENLLTLIKYADYRGVPLHMVKE 153
+ + VV+L+D S + + V +VFE++ ++L T + A G+P +K+
Sbjct: 65 LRRLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHVDQDLRTYLDKAPPPGLPAETIKD 124
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ L GLD LH I+H DLKPEN+L+ S
Sbjct: 125 LMRQFLRGLDFLHAN-CIVHRDLKPENILVTS 155
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 76/166 (45%), Gaps = 27/166 (16%)
Query: 305 CKLVDFGNA-CWTYKQ-FTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL DFG A ++Y+ T + T YR PEVLL S Y+TP D+WS CI E+ L
Sbjct: 159 VKLADFGLARIYSYQMALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFRRKPL 218
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLRFWPL 420
F +S + D L + +L+G+ P + RD G R R P+
Sbjct: 219 FCGNS------EADQLGKIFDLIGLPPED-----DWPRDVSLPRGAFPPRGPR-----PV 262
Query: 421 NKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
V+ E + A L+ +L F P KR +A + L H +++
Sbjct: 263 QSVVPEMEESG-------AQLLLEMLTFNPHKRISAFRALQHSYLH 301
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 20/148 (13%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEA-------ALDEIKILKQI 95
RY LG G F+TV+ A D T+ VA+K K H +EA AL EIK+L+++
Sbjct: 11 RYEKLDFLGEGQFATVYKARDKNTNQIVAIKKIKLG-HRSEAKDGINRTALREIKLLQEL 69
Query: 96 AEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEIC 155
+ + ++ LLD F H ++ +VF+++ +L +IK P H +K
Sbjct: 70 SHPN------IIGLLDAFGHK----SNISLVFDFMETDLEVIIKDNSLVLTPSH-IKAYM 118
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLL 183
L GL++LH+ I+H DLKP N+LL
Sbjct: 119 LMTLQGLEYLHQHW-ILHRDLKPNNLLL 145
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 41/85 (48%), Gaps = 10/85 (11%)
Query: 306 KLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDV 361
KL DFG A + + + + TR YR PE+L G++ Y D+W+ CI EL V
Sbjct: 152 KLADFGLAKSFGSPNRAYXHQVVTRWYRAPELLFGARMYGVGVDMWAVGCILAELLL-RV 210
Query: 362 LFDPHSGDNYDRDEDHLALMMELLG 386
F P D D D L + E LG
Sbjct: 211 PFLPG-----DSDLDQLTRIFETLG 230
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 35/180 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA-CWTYKQ-FTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ +L + KL DFG A ++++ T+ + T YR PEVLL S Y+TP DLWS CI
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-----MPRKIAFGGRYSRDFFNRHG 407
E+ LF S D D L +++++G+ PR +A
Sbjct: 209 FAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVA-------------- 248
Query: 408 DLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ R F + IEK+ D +++ D L+ L F P KR +A L+HP+
Sbjct: 249 ----LPRQAFHSKSAQPIEKF---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTS-HYVALK---VQKSAQHYTEAALDEIKILKQIAEG 98
+Y +++G G + V+ A D + +VALK VQ + + + E+ +L+ +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQ-HVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
+ + VV+L D S + + + +VFE++ ++L T + GVP +K++ F
Sbjct: 72 EHPN---VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLLMS 185
+L GLD LH ++H DLKP+N+L+ S
Sbjct: 129 LLRGLDFLHSH-RVVHRDLKPQNILVTS 155
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 35/180 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA-CWTYKQ-FTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ +L + KL DFG A ++++ T+ + T YR PEVLL S Y+TP DLWS CI
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-----MPRKIAFGGRYSRDFFNRHG 407
E+ LF S D D L +++++G+ PR +A
Sbjct: 209 FAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVA-------------- 248
Query: 408 DLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ R F + IEK+ D +++ D L+ L F P KR +A L+HP+
Sbjct: 249 ----LPRQAFHSKSAQPIEKF---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTS-HYVALK---VQKSAQHYTEAALDEIKILKQIAEG 98
+Y +++G G + V+ A D + +VALK VQ + + + E+ +L+ +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQ-HVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
+ + VV+L D S + + + +VFE++ ++L T + GVP +K++ F
Sbjct: 72 EHPN---VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLLMS 185
+L GLD LH ++H DLKP+N+L+ S
Sbjct: 129 LLRGLDFLHSH-RVVHRDLKPQNILVTS 155
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 82/180 (45%), Gaps = 35/180 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA-CWTYKQ-FTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ +L + KL DFG A ++++ T+ + T YR PEVLL S Y+TP DLWS CI
Sbjct: 149 QNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLLQSSYATPVDLWSVGCI 208
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-----MPRKIAFGGRYSRDFFNRHG 407
E+ LF S D D L +++++G+ PR +A
Sbjct: 209 FAEMFRRKPLFRGSS------DVDQLGKILDVIGLPGEEDWPRDVA-------------- 248
Query: 408 DLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ R F + IEK+ D +++ D L+ L F P KR +A L+HP+
Sbjct: 249 ----LPRQAFHSKSAQPIEKF---VTDIDELGKDLLLKCLTFNPAKRISAYSALSHPYFQ 301
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 79/148 (53%), Gaps = 9/148 (6%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTS-HYVALK---VQKSAQHYTEAALDEIKILKQIAEG 98
+Y +++G G + V+ A D + +VALK VQ + + + E+ +L+ +
Sbjct: 12 QYECVAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETF 71
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQ-HVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
+ + VV+L D S + + + +VFE++ ++L T + GVP +K++ F
Sbjct: 72 EHPN---VVRLFDVCTVSRTDRETKLTLVFEHVDQDLTTYLDKVPEPGVPTETIKDMMFQ 128
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLLMS 185
+L GLD LH ++H DLKP+N+L+ S
Sbjct: 129 LLRGLDFLHSH-RVVHRDLKPQNILVTS 155
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 24/169 (14%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG-SKYSTPADLWSFACICFELATGD 360
D + K++DFG A + T + TR YR PEV+L Y+ D+WS CI E+ TG
Sbjct: 180 DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
Query: 361 VLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPL 420
LF G +Y D L ++++ G+ G + + N +I+ L P
Sbjct: 240 TLF---KGKDY---LDQLTQILKVTGVP------GTEFVQK-LNDKAAKSYIQSLPQTP- 285
Query: 421 NKVLIEKYDFSE---KDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ DF++ + + AD L +L+ +KR TAAQ LTHP+
Sbjct: 286 ------RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 328
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 24/169 (14%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG-SKYSTPADLWSFACICFELATGD 360
D + K++DFG A + T + TR YR PEV+L Y+ D+WS CI E+ TG
Sbjct: 162 DCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
Query: 361 VLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPL 420
LF G +Y D L ++++ G+ G + + N +I+ L P
Sbjct: 222 TLF---KGKDY---LDQLTQILKVTGVP------GTEFVQK-LNDKAAKSYIQSLPQTP- 267
Query: 421 NKVLIEKYDFSE---KDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ DF++ + + AD L +L+ +KR TAAQ LTHP+
Sbjct: 268 ------RKDFTQLFPRASPQAADLLEKMLELDVDKRLTAAQALTHPFFE 310
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 88/194 (45%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 S-KYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
+ Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 AMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 80/176 (45%), Gaps = 25/176 (14%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACIC 353
L+ D KL DFG+A N I +R YR PE++ G++ Y+T D+WS CI
Sbjct: 163 LVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRYYRAPELIFGNQHYTTAVDIWSVGCIF 222
Query: 354 FELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSR---DFFNRHGDLR 410
E+ G+ +F GDN L ++ +LG R++ S D +N G
Sbjct: 223 AEMMLGEPIF---RGDN---SAGQLHEIVRVLGCPSREVLRKLNPSHTDVDLYNSKG--- 273
Query: 411 HIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
P + V D S KDA + D L +L ++PE+R + L HP+ +
Sbjct: 274 -------IPWSNVF---SDHSLKDAKEAYDLLSALLQYLPEERMKPYEALCHPYFD 319
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 68/147 (46%), Gaps = 12/147 (8%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDD 102
R+ V+ G G F TV L + T VA+K + E++I++ +A +
Sbjct: 24 RFQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNR---ELQIMQDLAVLHHPN 80
Query: 103 KKCVVKLLDHFKHSGPNGQ---HVCMVFEYLGENLLTLIKYADYRGV--PLHMVKEICFH 157
+V+L +F G + ++ +V EY+ + L + R V P ++K F
Sbjct: 81 ---IVQLQSYFYTLGERDRRDIYLNVVMEYVPDTLHRCCRNYYRRQVAPPPILIKVFLFQ 137
Query: 158 ILVGLDHLHR-ELSIIHTDLKPENVLL 183
++ + LH +++ H D+KP NVL+
Sbjct: 138 LIRSIGCLHLPSVNVCHRDIKPHNVLV 164
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 161 SNLAVNEDCE-----------------LKILDFGLARHTADEMTGYVATRWYRAPEIMLN 203
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 257
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 258 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 301
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 302 KRITAAQALAHAYF 315
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 90 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 141 ILRGLKYIHSA-DIIHRDLKPSNL 163
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 62.0 bits (149), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 161 SNLAVNEDCE-----------------LKILDFGLARHTADEMTGYVATRWYRAPEIMLN 203
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 257
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 258 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 301
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 302 KRITAAQALAHAYF 315
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 90 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 141 ILRGLKYIHSA-DIIHRDLKPSNL 163
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 48/164 (29%), Positives = 73/164 (44%), Gaps = 22/164 (13%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLG-SKYSTPADLWSFACICFELATGDVL 362
KL+DFG+A N I +R YR PE++ G + Y+T D+WS C+ EL G L
Sbjct: 182 KLIDFGSAKILIAGEPNVSXICSRYYRAPELIFGATNYTTNIDIWSTGCVMAELMQGQPL 241
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNK 422
F SG D L ++++LG R N + ++R P +K
Sbjct: 242 FPGESGI------DQLVEIIKVLGT-------PSREQIKTMNPNYMEHKFPQIRPHPFSK 288
Query: 423 VLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
V F + D D + +L++ P R TA + L HP+ +
Sbjct: 289 V------FRPRTPPDAIDLISRLLEYTPSARLTAIEALCHPFFD 326
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 66/138 (47%), Gaps = 15/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A ++ VA+K + + L ++I+K P+ VV L
Sbjct: 48 IGNGSFGVVFQAKLVESDE-VAIKKVLQDKRFKNRELQIMRIVKH-----PN----VVDL 97
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIK-YADYR-GVPLHMVKEICFHILVGLDHL 165
F +G V + V EY+ E + + YA + +P+ ++K + +L L ++
Sbjct: 98 KAFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQLLRSLAYI 157
Query: 166 HRELSIIHTDLKPENVLL 183
H + I H D+KP+N+LL
Sbjct: 158 H-SIGICHRDIKPQNLLL 174
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 62.0 bits (149), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 161 SNLAVNEDCE-----------------LKILDFGLARHTADEMTGYVATRWYRAPEIMLN 203
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 257
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 258 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 301
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 302 KRITAAQALAHAYF 315
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 90 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 141 ILRGLKYIHSA-DIIHRDLKPSNL 163
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGXVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 34/194 (17%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
S + I++D K PS E D + K++DFG A T + T + TR YR PE++L
Sbjct: 143 SADIIHRDLK-PSNLAVNE-----DXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---XQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---XQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 166 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 262
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 263 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 306
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 307 KRITAAQALAHAYF 320
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ K Q A E+++LK + +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 95 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 146 ILRGLKYIHSA-DIIHRDLKPSNL 168
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 174 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 216
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 270
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 271 S--SESARNYIQ---SLAQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 314
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 315 KRITAAQALAHAYF 328
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 103 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 154 ILRGLKYIHSA-DIIHRDLKPSNL 176
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 165 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 207
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 261
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 262 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 305
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 306 KRITAAQALAHAYF 319
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 94 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 144
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 145 ILRGLKYIHSA-DIIHRDLKPSNL 167
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 173 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 215
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 269
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 270 S--SESARNYIQ---SLAQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 313
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 314 KRITAAQALAHAYF 327
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 102 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 152
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 153 ILRGLKYIHSA-DIIHRDLKPSNL 175
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 160 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 256
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 257 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 300
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 301 KRITAAQALAHAYF 314
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 89 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 140 ILRGLKYIHSA-DIIHRDLKPSNL 162
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 166 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 262
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 263 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 306
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 307 KRITAAQALAHAYF 320
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 95 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 146 ILRGLKYIHSA-DIIHRDLKPSNL 168
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 177 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 219
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 273
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 274 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 317
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 318 KRITAAQALAHAYF 331
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 106 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 156
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 157 ILRGLKYIHSA-DIIHRDLKPSNL 179
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 166 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 208
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 209 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 262
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 263 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 306
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 307 KRITAAQALAHAYF 320
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 35 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 94
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 95 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 145
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 146 ILRGLKYIHSA-DIIHRDLKPSNL 168
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 160 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 256
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 257 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 300
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 301 KRITAAQALAHAYF 314
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 89 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 140 ILRGLKYIHSA-DIIHRDLKPSNL 162
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 174 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 216
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 270
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 271 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 314
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 315 KRITAAQALAHAYF 328
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 103 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 154 ILRGLKYIHSA-DIIHRDLKPSNL 176
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 160 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 256
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 257 S--SESARNYIQ---SLAQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 300
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 301 KRITAAQALAHAYF 314
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 89 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 140 ILRGLKYIHSA-DIIHRDLKPSNL 162
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 156 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 252
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 253 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 296
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 297 KRITAAQALAHAYF 310
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 85 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 136 ILRGLKYIHSA-DIIHRDLKPSNL 158
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 173 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 215
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 216 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 269
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 270 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 313
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 314 KRITAAQALAHAYF 327
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 42 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 101
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 102 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 152
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 153 ILRGLKYIHSA-DIIHRDLKPSNL 175
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 156 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 252
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 253 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 296
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 297 KRITAAQALAHAYF 310
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 85 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 136 ILRGLKYIHSA-DIIHRDLKPSNL 158
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 34/194 (17%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
S + I++D K PS E D + K++DFG A T + T + TR YR PE++L
Sbjct: 154 SADIIHRDLK-PSNLAVNE-----DXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 207
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 208 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 261
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 262 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 305
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 306 KRITAAQALAHAYF 319
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 34 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 93
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 94 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 144
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 145 ILRGLKYIHSA-DIIHRDLKPSNL 167
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 34/194 (17%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
S + I++D K PS E D + K++DFG A T + T + TR YR PE++L
Sbjct: 148 SADIIHRDLK-PSNLAVNE-----DXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 255
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 256 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 299
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 300 KRITAAQALAHAYF 313
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 88 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 139 ILRGLKYIHSA-DIIHRDLKPSNL 161
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 161 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 203
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 204 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 257
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 258 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 301
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 302 KRITAAQALAHAYF 315
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 30 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 89
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 90 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 140
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 141 ILRGLKYIHSA-DIIHRDLKPSNL 163
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLAQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 159 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 255
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 256 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 299
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 300 KRITAAQALAHAYF 313
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 88 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 139 ILRGLKYIHSA-DIIHRDLKPSNL 161
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 153 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 195
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 196 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 249
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 250 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 293
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 294 KRITAAQALAHAYF 307
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 22 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 81
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 82 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 132
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 133 ILRGLKYIHSA-DIIHRDLKPSNL 155
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 156 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 252
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 253 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 296
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 297 KRITAAQALAHAYF 310
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 85 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 136 ILRGLKYIHSA-DIIHRDLKPSNL 158
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 164 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 206
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 207 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 260
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 261 S--SESARNYIQ---SLAQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 304
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 305 KRITAAQALAHAYF 318
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY + +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 33 RYQNLAPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 92
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 93 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 143
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 144 ILRGLKYIHSA-DIIHRDLKPSNL 166
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 34/194 (17%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
S + I++D K PS E D + K++DFG A T + T + TR YR PE++L
Sbjct: 148 SADIIHRDLK-PSNLAVNE-----DXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 255
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 256 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 299
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 300 KRITAAQALAHAYF 313
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 28 RYQNLSPIGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 88 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 139 ILRGLKYIHSA-DIIHRDLKPSNL 161
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 66
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L T + + G+PL ++K F +L GL
Sbjct: 67 IVKLLDVIH----TENKLYLVFEFLHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 123 HSH-RVLHRDLKPQNLLI 139
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 195 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 237
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 238 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 465 IN 466
Sbjct: 290 FQ 291
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 159 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 201
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 202 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 255
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 256 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 299
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 300 KRITAAQALAHAYF 313
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 28 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 87
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 88 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 138
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 139 ILRGLKYIHSA-DIIHRDLKPSNL 161
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 152 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 194
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 195 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 248
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 249 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 292
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 293 KRITAAQALAHAYF 306
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 21 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 80
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 81 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 131
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 132 ILRGLKYIHSA-DIIHRDLKPSNL 154
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 151 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 193
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 247
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 248 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 291
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 292 KRITAAQALAHAYF 305
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 80 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 130
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 131 ILRGLKYIHSA-DIIHRDLKPSNL 153
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 34/194 (17%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
S + I++D K PS E D + K++DFG A T + T + TR YR PE++L
Sbjct: 149 SADIIHRDLK-PSNLAVNE-----DSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 202
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 203 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 256
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 257 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 300
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 301 KRITAAQALAHAYF 314
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 29 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 88
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 89 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 139
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 140 ILRGLKYIHSA-DIIHRDLKPSNL 162
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 151 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 193
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 194 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 247
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 248 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 291
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 292 KRITAAQALAHAYF 305
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 20 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 79
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 80 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 130
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 131 ILRGLKYIHSA-DIIHRDLKPSNL 153
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/194 (31%), Positives = 91/194 (46%), Gaps = 34/194 (17%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
S + I++D K PS E D + K++DFG A T + T + TR YR PE++L
Sbjct: 145 SADIIHRDLK-PSNLAVNE-----DSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 198
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 199 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 252
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 253 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 296
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 297 KRITAAQALAHAYF 310
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 25 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 84
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 85 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 135
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 136 ILRGLKYIHSA-DIIHRDLKPSNL 158
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 150 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 246
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 247 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 290
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 291 KRITAAQALAHAYF 304
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 79 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 130 ILRGLKYIHSA-DIIHRDLKPSNL 152
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 150 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 246
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 247 S--SESARNYIQ---SLAQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 290
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 291 KRITAAQALAHAYF 304
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K A V+ + +
Sbjct: 79 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKCAKLTD---DHVQFLIYQ 129
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 130 ILRGLKYIHSA-DIIHRDLKPSNL 152
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 150 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 192
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 246
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 247 S--SESARNYIQ---SLAQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 290
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 291 KRITAAQALAHAYF 304
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 79 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 130 ILRGLKYIHSA-DIIHRDLKPSNL 152
>pdb|2CHL|A Chain A, Structure Of Casein Kinase 1 Gamma 3
Length = 351
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 79/165 (47%), Gaps = 17/165 (10%)
Query: 19 DEGTEDYRRGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSA 78
D GTE+ + +G F+ G+ K+G G+F + L + T+ YVA+K++
Sbjct: 12 DLGTENLYFQSMGVLMVGPNFRVGK-----KIGCGNFGELRLGKNLYTNEYVAIKLEPMK 66
Query: 79 QHYTEAALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLI 138
+ L E + KQ+ GD + + GP G++ MV E LG +L L
Sbjct: 67 SRAPQLHL-EYRFYKQLGSGDG---------IPQVYYFGPCGKYNAMVLELLGPSLEDLF 116
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
D R L V I ++ ++++H + ++I+ D+KPEN L+
Sbjct: 117 DLCD-RTFSLKTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLI 159
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + + TR YR PE++L
Sbjct: 174 SNLAVNEDCE-----------------LKILDFGLARHTDDEMXGXVATRWYRAPEIMLN 216
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 217 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 270
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 271 S--SESARNYIQ---SLAQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 314
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 315 KRITAAQALAHAYF 328
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 43 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 102
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 103 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 153
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 154 ILRGLKYIHSA-DIIHRDLKPSNL 176
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/193 (30%), Positives = 82/193 (42%), Gaps = 41/193 (21%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + T + TR YR PE++L
Sbjct: 183 SNLAVNEDCE-----------------LKILDFGLARHTDDEMTGYVATRWYRAPEIMLN 225
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGG 396
Y+ D+WS CI EL TG LF N L +M L G P +
Sbjct: 226 WMHYNMTVDIWSVGCIMAELLTGRTLFPGTDHIN------QLQQIMRLTGTPPASVI--- 276
Query: 397 RYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEK--DANDMA-DFLVPILDFVPEKR 453
SR H +I L P K +F++ AN +A D L +L +KR
Sbjct: 277 --SR--MPSHEARNYINSLPQMP-------KRNFADVFIGANPLAVDLLEKMLVLDTDKR 325
Query: 454 PTAAQCLTHPWIN 466
TA++ L HP+ +
Sbjct: 326 ITASEALAHPYFS 338
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 69/144 (47%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V ++D ++ +A+K + + Q A E+++LK + +
Sbjct: 52 RYQTLSPVGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 111
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 112 ------VIGLLDVFTPATSLEEFNDVYLVTHLMGADLNNIVKC---QKLTDDHVQFLIYQ 162
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 163 ILRGLKYIHSA-DIIHRDLKPSNL 185
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 87/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++D+G A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDYGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 76/169 (44%), Gaps = 24/169 (14%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG-SKYSTPADLWSFACICFELATGD 360
D + K++DFG A + + TR YR PEV+L +Y+ D+WS CI E+ TG
Sbjct: 164 DCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
Query: 361 VLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPL 420
LF + DHL + E++ + G +F R ++ P
Sbjct: 224 TLF---------KGSDHLDQLKEIMKVT-------GTPPAEFVQRLQSDEAKNYMKGLP- 266
Query: 421 NKVLIEKYDFSE--KDANDMA-DFLVPILDFVPEKRPTAAQCLTHPWIN 466
+EK DF+ +A+ +A + L +L E+R TA + L HP+
Sbjct: 267 ---ELEKKDFASILTNASPLAVNLLEKMLVLDAEQRVTAGEALAHPYFE 312
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 75/162 (46%), Gaps = 17/162 (10%)
Query: 27 RGGYHAVRMGDTFKNGRYVVQ--SKLGWGHFSTVWLAWDTQTSHYVALKVQK---SAQHY 81
R G++ + T R V + +G G + V A D +T VA+K ++ +
Sbjct: 8 RSGFYRQEVTKTAWEVRAVYRDLQPVGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELF 67
Query: 82 TEAALDEIKILKQIAEGDPDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIK 139
+ A E+++LK + + V+ LLD F + + +V ++G +L L+K
Sbjct: 68 AKRAYRELRLLKHMRHEN------VIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMK 121
Query: 140 YADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENV 181
+ + ++ + + +L GL ++H IIH DLKP N+
Sbjct: 122 H---EKLGEDRIQFLVYQMLKGLRYIHAA-GIIHRDLKPGNL 159
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/181 (30%), Positives = 80/181 (44%), Gaps = 39/181 (21%)
Query: 304 KCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATG 359
+ KL DFG A K + N++ T YR P++LLGS YST D+W CI +E+ATG
Sbjct: 138 ELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILLGSTDYSTQIDMWGVGCIFYEMATG 197
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRH--------GDLRH 411
LF P S E+ L + +LG P + + G S + F + L H
Sbjct: 198 RPLF-PGS-----TVEEQLHFIFRILG-TPTEETWPGILSNEEFKTYNYPKYRAEALLSH 250
Query: 412 IRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHP-WINVGPR 470
RL +D AD L +L F R +A + HP ++++G R
Sbjct: 251 APRLD-------------------SDGADLLTKLLQFEGRNRISAEDAMKHPFFLSLGER 291
Query: 471 L 471
+
Sbjct: 292 I 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 72/150 (48%), Gaps = 30/150 (20%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
Y+ KLG G ++TV+ T + VALK EI++ + EG P
Sbjct: 4 YIKLDKLGEGTYATVYKGKSKLTDNLVALK--------------EIRL--EHEEGAPCTA 47
Query: 104 KCVVKLLDHFKHSGPNGQH--------VCMVFEYLGENLLTLIKYADYRG--VPLHMVKE 153
V LL KH+ H + +VFEYL ++ L +Y D G + +H VK
Sbjct: 48 IREVSLLKDLKHANIVTLHDIIHTEKSLTLVFEYLDKD---LKQYLDDCGNIINMHNVKL 104
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLL 183
F +L GL + HR+ ++H DLKP+N+L+
Sbjct: 105 FLFQLLRGLAYCHRQ-KVLHRDLKPQNLLI 133
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 65
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 66 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKPEN+L+
Sbjct: 122 HSH-RVLHRDLKPENLLI 138
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 134 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 194 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 236
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 237 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
Query: 465 IN 466
Sbjct: 289 FQ 290
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 64
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 65 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKPEN+L+
Sbjct: 121 HSH-RVLHRDLKPENLLI 137
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 133 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 193 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 235
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 236 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 465 IN 466
Sbjct: 288 FQ 289
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 66
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L +L + + G+PL ++K F +L GL
Sbjct: 67 IVKLLDVIH----TENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKPEN+L+
Sbjct: 123 HSH-RVLHRDLKPENLLI 139
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 135 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 195 CIFAEMVTRRALF 207
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/188 (29%), Positives = 84/188 (44%), Gaps = 33/188 (17%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL D KL DFG A + +T+++ T YR P+VL+GSK YST D+WS
Sbjct: 148 QNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIG 207
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDL 409
CI E+ TG LF + D+D L + +LG PR +
Sbjct: 208 CIFAEMITGKPLFPGVT------DDDQLPKIFSILGTPNPR-----------------EW 244
Query: 410 RHIRRLRFWPLNKV-LIEKYDFSE---KDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
++ L W + EK +S + D L +L F P KR +A + HP+
Sbjct: 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
Query: 466 -NVGPRLL 472
++ P+++
Sbjct: 305 KDLDPQIM 312
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGD 99
+Y K+G G + V+ A D+Q VALK + + A+ EI +LK++ +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
+V L+D HS + + +VFE++ ++L ++ + G+ +K + +L
Sbjct: 81 ------IVSLIDVI-HSE---RCLTLVFEFMEKDLKKVLD-ENKTGLQDSQIKIYLYQLL 129
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMS 185
G+ H H+ I+H DLKP+N+L+ S
Sbjct: 130 RGVAHCHQH-RILHRDLKPQNLLINS 154
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/180 (30%), Positives = 78/180 (43%), Gaps = 32/180 (17%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL D KL DFG A + +T+++ T YR P+VL+GSK YST D+WS
Sbjct: 148 QNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLMGSKKYSTSVDIWSIG 207
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDL 409
CI E+ TG LF + D+D L + +LG PR +
Sbjct: 208 CIFAEMITGKPLFPGVT------DDDQLPKIFSILGTPNPR-----------------EW 244
Query: 410 RHIRRLRFWPLNKV-LIEKYDFSE---KDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
++ L W + EK +S + D L +L F P KR +A + HP+
Sbjct: 245 PQVQELPLWKQRTFQVFEKKPWSSIIPGFCQEGIDLLSNMLCFDPNKRISARDAMNHPYF 304
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/146 (28%), Positives = 75/146 (51%), Gaps = 16/146 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGD 99
+Y K+G G + V+ A D+Q VALK + + A+ EI +LK++ +
Sbjct: 22 KYQKLEKVGEGTYGVVYKAKDSQ-GRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPN 80
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
+V L+D HS + + +VFE++ ++L ++ + G+ +K + +L
Sbjct: 81 ------IVSLIDVI-HSE---RCLTLVFEFMEKDLKKVLD-ENKTGLQDSQIKIYLYQLL 129
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMS 185
G+ H H+ I+H DLKP+N+L+ S
Sbjct: 130 RGVAHCHQH-RILHRDLKPQNLLINS 154
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 64
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L +L + + G+PL ++K F +L GL
Sbjct: 65 IVKLLDVIH----TENKLYLVFEFLSMDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKPEN+L+
Sbjct: 121 HSH-RVLHRDLKPENLLI 137
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 133 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 193 CIFAEMVTRRALF 205
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMAGFVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/138 (30%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 63
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKPEN+L+
Sbjct: 120 HSH-RVLHRDLKPENLLI 136
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 132 ENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 192 CIFAEMVTRRALF 204
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 58.9 bits (141), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + + TR YR PE++L
Sbjct: 177 SNLAVNEDCE-----------------LKILDFGLARHTDDEMXGYVATRWYRAPEIMLN 219
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 220 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 273
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 274 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 317
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 318 KRITAAQALAHAYF 331
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 46 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 105
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 106 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 156
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 157 ILRGLKYIHSA-DIIHRDLKPSNL 179
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFGLARHTDDEMAGFVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLAQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 63
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLSFC 119
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 192 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 234
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 235 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 465 IN 466
Sbjct: 287 FQ 288
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 67
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 68 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 124 HSH-RVLHRDLKPQNLLI 140
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 136 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 195
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 196 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 238
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 239 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
Query: 465 IN 466
Sbjct: 291 FQ 292
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 60/194 (30%), Positives = 90/194 (46%), Gaps = 34/194 (17%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
S + I++D K PS E D + K++DFG T + T + TR YR PE++L
Sbjct: 143 SADIIHRDLK-PSNLAVNE-----DSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---SQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 70
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 71 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 127 HSH-RVLHRDLKPQNLLI 143
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLG 198
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 199 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 241
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 242 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
Query: 465 IN 466
Sbjct: 294 FQ 295
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 58.5 bits (140), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 17 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 70
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 71 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 126
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 127 HSH-RVLHRDLKPQNLLI 143
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 139 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 198
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 199 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 241
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 242 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 293
Query: 465 IN 466
Sbjct: 294 FQ 295
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 66
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 67 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 123 HSH-RVLHRDLKPQNLLI 139
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 195 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 237
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 238 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 465 IN 466
Sbjct: 290 FQ 291
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 65
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 66 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 122 HSH-RVLHRDLKPQNLLI 138
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 194 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 236
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 237 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
Query: 465 IN 466
Sbjct: 289 FQ 290
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 66
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 67 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 123 HSH-RVLHRDLKPQNLLI 139
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 195 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 237
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 238 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 289
Query: 465 IN 466
Sbjct: 290 FQ 291
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 65
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 66 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 122 HSH-RVLHRDLKPQNLLI 138
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 194 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 236
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 237 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 288
Query: 465 IN 466
Sbjct: 289 FQ 290
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 14 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 67
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 68 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 123
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 124 HSH-RVLHRDLKPQNLLI 140
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 136 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 195
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 196 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 238
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 239 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 290
Query: 465 IN 466
Sbjct: 291 FQ 292
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DFG A T + + TR YR PE++L
Sbjct: 150 SNLAVNEDCE-----------------LKILDFGLARHTDDEMAGFVATRWYRAPEIMLN 192
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 193 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 246
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 247 S--SESARNYIQ---SLAQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 290
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 291 KRITAAQALAHAYF 304
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 19 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 78
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 79 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 129
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 130 ILRGLKYIHSA-DIIHRDLKPSNL 152
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 64
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 65 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 121 HSH-RVLHRDLKPQNLLI 137
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 193 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 235
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 236 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 465 IN 466
Sbjct: 288 FQ 289
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 64
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 65 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 121 HSH-RVLHRDLKPQNLLI 137
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 193 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 235
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 236 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 465 IN 466
Sbjct: 288 FQ 289
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++ FG A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILGFGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 63
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXKYYSTAVDIWSLG 191
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 192 CIFAEMVTRRALF 204
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 63
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 192 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 234
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 235 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 465 IN 466
Sbjct: 287 FQ 288
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 63
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 192 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 234
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 235 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 465 IN 466
Sbjct: 287 FQ 288
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 63
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 192 CIFAEMVTRRALF 204
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 63
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 192 CIFAEMVTRRALF 204
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 62
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 63 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 191 CIFAEMVTRRALF 203
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 62
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 63 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 191 CIFAEMVTRRALF 203
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 63
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 192 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 234
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 235 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 286
Query: 465 IN 466
Sbjct: 287 FQ 288
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 70/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 62
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE++ ++L T + + G+PL ++K F +L GL
Sbjct: 63 IVKLLDVIH----TENKLYLVFEHVHQDLKTFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 191 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 233
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 234 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
Query: 465 IN 466
Sbjct: 286 FQ 287
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 62
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 63 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/182 (30%), Positives = 77/182 (42%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 191 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 233
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 234 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 285
Query: 465 IN 466
Sbjct: 286 FQ 287
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 63
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 192 CIFAEMVTRRALF 204
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 62
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 63 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 191 CIFAEMVTRRALF 203
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 11 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 64
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 65 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 120
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 121 HSH-RVLHRDLKPQNLLI 137
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 76/182 (41%), Gaps = 35/182 (19%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 133 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 192
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S
Sbjct: 193 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSM---------- 235
Query: 411 HIRRLRFWPLNKVLIEKY---DFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPW 464
P K K+ DFS+ D L +L + P KR +A L HP+
Sbjct: 236 --------PDYKPSFPKWARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPF 287
Query: 465 IN 466
Sbjct: 288 FQ 289
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++D G A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDAGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 66
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L +L + + G+PL ++K F +L GL
Sbjct: 67 IVKLLDVIH----TENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 123 HSH-RVLHRDLKPQNLLI 139
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 195 CIFAEMVTRRALF 207
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++DF A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDFYLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 71/144 (49%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T H VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 68/138 (49%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 12 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 65
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L +L + + G+PL ++K F +L GL
Sbjct: 66 IVKLLDVIH----TENKLYLVFEFLSMDLKDFMDASALTGIPLPLIKSYLFQLLQGLAFC 121
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 122 HSH-RVLHRDLKPQNLLI 138
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 134 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 193
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 194 CIFAEMVTRRALF 206
>pdb|2IZR|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZS|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZT|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
pdb|2IZU|A Chain A, Structure Of Casein Kinase Gamma 3 In Complex With
Inhibitor
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 71/149 (47%), Gaps = 12/149 (8%)
Query: 35 MGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQ 94
MG + V K+G G+F + L + T+ YVA+K++ + L E + KQ
Sbjct: 2 MGVLMVGPNFRVGKKIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL-EYRFYKQ 60
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ GD + + GP G++ MV E LG +L L D R L V I
Sbjct: 61 LGSGDG---------IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSLKTVLMI 110
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLL 183
++ ++++H + ++I+ D+KPEN L+
Sbjct: 111 AIQLISRMEYVHSK-NLIYRDVKPENFLI 138
>pdb|2C47|A Chain A, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|B Chain B, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|C Chain C, Structure Of Casein Kinase 1 Gamma 2
pdb|2C47|D Chain D, Structure Of Casein Kinase 1 Gamma 2
Length = 313
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 21/151 (13%)
Query: 35 MGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQ 94
MG F+ G+ K+G G+F + L + T+ YVA+K++ + L E + KQ
Sbjct: 2 MGPNFRVGK-----KIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHL-EYRFYKQ 55
Query: 95 IA--EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
++ EG P + GP G++ MV E LG +L L D R L V
Sbjct: 56 LSATEGVP-----------QVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVL 103
Query: 153 EICFHILVGLDHLHRELSIIHTDLKPENVLL 183
I ++ ++++H + S+I+ D+KPEN L+
Sbjct: 104 MIAIQLITRMEYVHTK-SLIYRDVKPENFLV 133
>pdb|4HGL|A Chain A, Crystal Structure Of Ck1g3 With Compound 1
pdb|4HGS|A Chain A, Crystal Structure Of Ck1gs With Compound 13
Length = 330
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 75/155 (48%), Gaps = 17/155 (10%)
Query: 29 GYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDE 88
G + +G F+ G+ K+G G+F + L + T+ YVA+K++ + L E
Sbjct: 1 GSGVLMVGPNFRVGK-----KIGCGNFGELRLGKNLYTNEYVAIKLEPMKSRAPQLHL-E 54
Query: 89 IKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPL 148
+ KQ+ GD + + GP G++ MV E LG +L L D R L
Sbjct: 55 YRFYKQLGSGDG---------IPQVYYFGPCGKYNAMVLELLGPSLEDLFDLCD-RTFSL 104
Query: 149 HMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
V I ++ ++++H + ++I+ D+KPEN L+
Sbjct: 105 KTVLMIAIQLISRMEYVHSK-NLIYRDVKPENFLI 138
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++D G A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDRGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 86/194 (44%), Gaps = 45/194 (23%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG 337
SN +N+DC+ K++D G A T + T + TR YR PE++L
Sbjct: 154 SNLAVNEDCE-----------------LKILDGGLARHTDDEMTGYVATRWYRAPEIMLN 196
Query: 338 -SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM----MPRKI 392
Y+ D+WS CI EL TG LF G ++ D L L++ L+G + +KI
Sbjct: 197 WMHYNQTVDIWSVGCIMAELLTGRTLF---PGTDHI---DQLKLILRLVGTPGAELLKKI 250
Query: 393 AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPE 451
+ +R++ L + ++ F V I AN +A D L +L +
Sbjct: 251 S--SESARNYIQ---SLTQMPKMNF---ANVFI--------GANPLAVDLLEKMLVLDSD 294
Query: 452 KRPTAAQCLTHPWI 465
KR TAAQ L H +
Sbjct: 295 KRITAAQALAHAYF 308
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 15/144 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
RY S +G G + +V A+DT+T VA+ K+ + Q A E+++LK + +
Sbjct: 23 RYQNLSPVGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHEN 82
Query: 100 PDDKKCVVKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH 157
V+ LLD F S V +V +G +L ++K + + V+ + +
Sbjct: 83 ------VIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVK---CQKLTDDHVQFLIYQ 133
Query: 158 ILVGLDHLHRELSIIHTDLKPENV 181
IL GL ++H IIH DLKP N+
Sbjct: 134 ILRGLKYIHSA-DIIHRDLKPSNL 156
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVAL---KVQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VAL ++ + A+ EI +LK++ +
Sbjct: 10 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN------ 63
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 64 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 119
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 120 HSH-RVLHRDLKPQNLLI 136
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 132 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 191
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 192 CIFAEMVTRRALF 204
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVAL---KVQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VAL ++ + A+ EI +LK++ +
Sbjct: 9 KIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIREISLLKELNHPN------ 62
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE+L ++L + + G+PL ++K F +L GL
Sbjct: 63 IVKLLDVIH----TENKLYLVFEFLHQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 118
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 119 HSH-RVLHRDLKPQNLLI 135
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 4/73 (5%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + KL DFG A + +T+++ T YR PE+LLG K YST D+WS
Sbjct: 131 QNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 190
Query: 351 CICFELATGDVLF 363
CI E+ T LF
Sbjct: 191 CIFAEMVTRRALF 203
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 68/164 (41%), Gaps = 32/164 (19%)
Query: 320 FTNDIQTRQYRCPEVLLGS-KYSTPADLWSFACICFELATGDVLFDPHSG---------- 368
T+ + TR YR PE+LLGS KY+ D+WS CI E+ G +F S
Sbjct: 187 LTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQLERIIGV 246
Query: 369 ----DNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVL 424
N D + ++ + K+ RD F + +L L+ P
Sbjct: 247 IDFPSNEDVESIQSPFAKTMIESLKEKVEIRQSNKRDIFTKWKNL----LLKINP----- 297
Query: 425 IEKYDFSEKDANDMA-DFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ D N+ A D L +L F P KR +A L HP++++
Sbjct: 298 -------KADCNEEALDLLDKLLQFNPNKRISANDALKHPFVSI 334
Score = 49.7 bits (117), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 76/144 (52%), Gaps = 14/144 (9%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEA--ALDEIKILKQIAEGD 99
+Y + KLG G + VW + D +T VA+ K+ + Q+ T+A EI IL +++
Sbjct: 10 KYELVKKLGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELS--- 66
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
+ +V LL+ + N + V +VF+Y+ +L +I+ P+H + + + ++
Sbjct: 67 --GHENIVNLLNVLR--ADNDRDVYLVFDYMETDLHAVIRANILE--PVHK-QYVVYQLI 119
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
+ +LH ++H D+KP N+LL
Sbjct: 120 KVIKYLHSG-GLLHRDMKPSNILL 142
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/175 (26%), Positives = 79/175 (45%), Gaps = 12/175 (6%)
Query: 297 LLAAVDLKCKLVDFG---NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACIC 353
++ D K++DFG AC + T + TR YR PEV+LG Y+ D+WS CI
Sbjct: 157 IVVKSDCTLKILDFGLARTACTNF-MMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIM 215
Query: 354 FELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYS-RDFFNRHGDLRHI 412
EL G V+F D+ D+ ++E LG + + + R++ I
Sbjct: 216 GELVKGCVIF--QGTDHIDQWNK----VIEQLGTPSAEFMAALQPTVRNYVENRPKYPGI 269
Query: 413 RRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + + + + D L +L P+KR + + L HP+I V
Sbjct: 270 KFEELFP-DWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 323
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V + D TF RY +G G V A+DT VA+K + + Q+ T A
Sbjct: 10 FYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 69
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ +LK + + K ++ LL+ F + + Q V +V E + NL +I
Sbjct: 70 AYRELVLLKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---- 119
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 120 HMELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 69/138 (50%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
K+G G + V+ A + T VALK + + A+ EI +LK++ +
Sbjct: 13 KIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIREISLLKELNHPN------ 66
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + +VFE++ ++L + + G+PL ++K F +L GL
Sbjct: 67 IVKLLDVIH----TENKLYLVFEHVDQDLKKFMDASALTGIPLPLIKSYLFQLLQGLAFC 122
Query: 166 HRELSIIHTDLKPENVLL 183
H ++H DLKP+N+L+
Sbjct: 123 HSH-RVLHRDLKPQNLLI 139
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/179 (29%), Positives = 75/179 (41%), Gaps = 29/179 (16%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFA 350
+ LL + KL DFG A + + +++ T YR PE+LLG KY ST D+WS
Sbjct: 135 QNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKYYSTAVDIWSLG 194
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
CI E+ T LF GD+ + D L + LG P ++ + G S +
Sbjct: 195 CIFAEMVTRRALF---PGDS---EIDQLFRIFRTLG-TPDEVVWPGVTSMPDYK------ 241
Query: 411 HIRRLRFWPLNKVLIEKYDFSEKDA---NDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
W + DFS+ D L +L + P KR +A L HP+
Sbjct: 242 --PSFPKW-------ARQDFSKVVPPLDEDGRSLLSQMLHYDPNKRISAKAALAHPFFQ 291
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 48/87 (55%), Gaps = 10/87 (11%)
Query: 305 CKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K+ DFG A +QFT++I T YR PE+LLGS+ YST D+WS ACI E+
Sbjct: 176 LKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGSRHYSTSVDIWSIACIWAEMLMKT 235
Query: 361 VLFDPHSGDNYDRDEDHLALMMELLGM 387
LF D + D L + E+LG+
Sbjct: 236 PLFPG------DSEIDQLFKIFEVLGL 256
Score = 52.4 bits (124), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 47/155 (30%), Positives = 79/155 (50%), Gaps = 19/155 (12%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGD 99
RY +KLG G + V+ A DT T+ VA+K ++ + A+ E+ +LK++ +
Sbjct: 35 RYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKELQHRN 94
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYR-GVPLHMVKEICFHI 158
+ K V+ H H + ++FEY EN L KY D V + ++K + +
Sbjct: 95 IIELKSVI----HHNH------RLHLIFEY-AEN--DLKKYMDKNPDVSMRVIKSFLYQL 141
Query: 159 LVGLDHLHRELSIIHTDLKPENVLLMSMIDPSKDP 193
+ G++ H +H DLKP+N LL+S+ D S+ P
Sbjct: 142 INGVNFCHSR-RCLHRDLKPQN-LLLSVSDASETP 174
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 217 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 271 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 70 AYRELVLMKXV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME- 122
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 123 ---LDHERMSYLLYQMLXGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 217 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 271 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 70 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME- 122
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 123 ---LDHERMSYLLYQMLXGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 55.8 bits (133), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 195 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 255 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 308
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 309 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 107
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 108 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 160
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 161 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 199
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 150 IVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 210 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 263
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 264 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 63 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME- 115
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 116 ---LDHERMSYLLYQMLXGIKHLHSA-GIIHRDLKPSNIVVKS 154
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 158 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 218 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 271
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 272 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/172 (27%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 21 GTEDYRRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKS 77
G++ +++V +GD TF RY +G G V A+D VA+K + +
Sbjct: 2 GSKSKVDNQFYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRP 61
Query: 78 AQHYTEA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGEN 133
Q+ T A A E+ ++K + + K ++ LL+ F + + Q V +V E + N
Sbjct: 62 FQNQTHAKRAYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDAN 115
Query: 134 LLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
L +I+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 116 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 162
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 195 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 254
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 255 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 308
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 309 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 361
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 48 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 107
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 108 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 160
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 161 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 199
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 217 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 271 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 70 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 122
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 217 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 271 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 70 AYRELVLMKXV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLXQVIQME- 122
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 217 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 271 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 70 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 122
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T ++ TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ G VLF G ++ D ++E LG P + R +
Sbjct: 217 EMIKGGVLF---PGTDHI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + + A+ D L +L KR + + L HP+INV +
Sbjct: 271 FEKLFP-DVLFPADSEHNALKASQARDLLSKMLVIDASKRISVDEALQHPYINVW---YD 326
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 327 PSEAEAPPP----KIPDK---QLDERE 346
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 156 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 215
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 216 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 269
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 270 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 322
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 9 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 68
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 69 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 121
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 122 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 160
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.5 bits (132), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 86/207 (41%), Gaps = 51/207 (24%)
Query: 269 GSLIKNEATSNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ 328
G + ++ SN +N+DC+ +++DFG A ++ T + TR
Sbjct: 143 GIIHRDLKPSNVAVNEDCE-----------------LRILDFGLARQADEEMTGYVATRW 185
Query: 329 YRCPEVLLG-SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM 387
YR PE++L Y+ D+WS CI EL G LF G +Y D L +ME++G
Sbjct: 186 YRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGKALF---PGSDYI---DQLKRIMEVVGT 239
Query: 388 -MPRKIA-FGGRYSRDFFNR-----HGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA- 439
P +A ++R + DL I R AN +A
Sbjct: 240 PSPEVLAKISSEHARTYIQSLPPMPQKDLSSIFR-------------------GANPLAI 280
Query: 440 DFLVPILDFVPEKRPTAAQCLTHPWIN 466
D L +L ++R +AA+ L H + +
Sbjct: 281 DLLGRMLVLDSDQRVSAAEALAHAYFS 307
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA--ALDEIKILKQIAEGDPDDKKCV 106
+G G + +V A+D + VA+K + + Q A E+++LK + + V
Sbjct: 28 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN------V 81
Query: 107 VKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+ LLD F S + V +V +G +L ++K + + V+ + + +L GL +
Sbjct: 82 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC---QALSDEHVQFLVYQLLRGLKY 138
Query: 165 LHRELSIIHTDLKPENV 181
+H IIH DLKP NV
Sbjct: 139 IHSA-GIIHRDLKPSNV 154
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 158 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 218 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 271
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 272 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 324
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 11 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 70
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 71 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 123
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 124 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 162
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 34/174 (19%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG-SKYSTPADLWSFACICFELATGD 360
D + +++DFG A ++ T + TR YR PE++L Y+ D+WS CI EL G
Sbjct: 167 DSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
Query: 361 VLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIA-FGGRYSRDFFNR-----HGDLRHIR 413
LF G +Y D L +ME++G P +A ++R + DL I
Sbjct: 227 ALF---PGSDYI---DQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIF 280
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPEKRPTAAQCLTHPWIN 466
R AN +A D L +L ++R +AA+ L H + +
Sbjct: 281 R-------------------GANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 315
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA--ALDEIKILKQIAEGDPDDKKCV 106
+G G + +V A+D + VA+K + + Q A E+++LK + + V
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN------V 89
Query: 107 VKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+ LLD F S + V +V +G +L ++K + + V+ + + +L GL +
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKS---QALSDEHVQFLVYQLLRGLKY 146
Query: 165 LHRELSIIHTDLKPENV 181
+H IIH DLKP NV
Sbjct: 147 IHSA-GIIHRDLKPSNV 162
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 150 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 209
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 210 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 263
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 264 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 316
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 3 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 62
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 63 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 115
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 116 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 154
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 151 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 210
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 211 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 264
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 265 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 317
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 63
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 64 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 116
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 117 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 155
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 55.1 bits (131), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 151 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 210
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 211 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 264
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 265 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 317
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 4 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 63
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 64 AYRELVLMKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 116
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 117 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 155
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ G VLF G ++ D ++E LG P + R +
Sbjct: 217 EMIKGGVLF---PGTDHI---DQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYS 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 271 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV---WYD 326
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 327 PSEAEAPPP----KIPDK---QLDERE 346
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKVV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +LVG+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLVGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/174 (27%), Positives = 75/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++ +
Sbjct: 217 EMVRHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRNYVENRPKYAGLT 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ +P + + + ++ A+ D L +L P KR + L HP+INV
Sbjct: 271 FPKLFP-DSLFPADSEHNKLKASQARDLLSKMLVIDPAKRISVDDALQHPYINV 323
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 10 FYSVEVGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAVLDRNVAIKKLSRPFQNQTHAKR 69
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ ++K + + K ++ LL+ F + + Q V +V E + NL +I+
Sbjct: 70 AYRELVLMKXV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVIQME- 122
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 123 ---LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ G VLF G ++ D ++E LG P + R +
Sbjct: 217 EMIKGGVLF---PGTDHI---DQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYS 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 271 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV---WYD 326
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 327 PSEAEAPPP----KIPDK---QLDERE 346
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKVV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/174 (27%), Positives = 76/174 (43%), Gaps = 10/174 (5%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQF--TNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A F T + TR YR PEV+LG Y D+WS CI
Sbjct: 155 IVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 214
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYS-RDFFNRHGDLRHIR 413
EL G V+F D+ D+ ++E LG + + + R++ I
Sbjct: 215 ELVKGSVIF--QGTDHIDQWNK----VIEQLGTPSAEFMAALQPTVRNYVENRPAYPGIA 268
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+P + + + + + + D L +L P+KR + + L HP+I V
Sbjct: 269 FEELFP-DWIFPSESERDKIKTSQARDLLSKMLVIDPDKRISVDEALRHPYITV 321
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 30 YHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA-- 84
+++V++ D TF RY +G G V A+DT VA+K + + Q+ T A
Sbjct: 8 FYSVQVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKR 67
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
A E+ +LK + + K ++ LL+ F + + Q V +V E + NL +I
Sbjct: 68 AYRELVLLKCV------NHKNIISLLNVFTPQKTLEEFQDVYLVMELMDANLCQVI---- 117
Query: 143 YRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 118 HMELDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 159
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 34/174 (19%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG-SKYSTPADLWSFACICFELATGD 360
D + +++DFG A ++ T + TR YR PE++L Y+ D+WS CI EL G
Sbjct: 167 DSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
Query: 361 VLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIA-FGGRYSRDFFNR-----HGDLRHIR 413
LF G +Y D L +ME++G P +A ++R + DL I
Sbjct: 227 ALF---PGSDYI---DQLKRIMEVVGTPSPEVLAKISSEHARTYIQSLPPMPQKDLSSIF 280
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMA-DFLVPILDFVPEKRPTAAQCLTHPWIN 466
R AN +A D L +L ++R +AA+ L H + +
Sbjct: 281 R-------------------GANPLAIDLLGRMLVLDSDQRVSAAEALAHAYFS 315
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 38/137 (27%), Positives = 66/137 (48%), Gaps = 15/137 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA--ALDEIKILKQIAEGDPDDKKCV 106
+G G + +V A+D + VA+K + + Q A E+++LK + + V
Sbjct: 36 VGSGAYGSVCSAYDARLRQKVAVKKLSRPFQSLIHARRTYRELRLLKHLKHEN------V 89
Query: 107 VKLLDHFK--HSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+ LLD F S + V +V +G +L ++K + + V+ + + +L GL +
Sbjct: 90 IGLLDVFTPATSIEDFSEVYLVTTLMGADLNNIVKC---QALSDEHVQFLVYQLLRGLKY 146
Query: 165 LHRELSIIHTDLKPENV 181
+H IIH DLKP NV
Sbjct: 147 IHSA-GIIHRDLKPSNV 162
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 75/145 (51%), Gaps = 17/145 (11%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH---YTEAALDEIKILKQIAEGD 99
+Y K+G G + V+ + T VA+K ++ + AL EI++LKQ+ +
Sbjct: 4 KYEKIGKIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPN 63
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLL-TLIKYADYRGVPLHMVKEICFHI 158
+V LL+ F+ + + +VFEY +L L +Y RGVP H+VK I +
Sbjct: 64 ------LVNLLEVFRRK----RRLHLVFEYCDHTVLHELDRYQ--RGVPEHLVKSITWQT 111
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
L ++ H+ + IH D+KPEN+L+
Sbjct: 112 LQAVNFCHKH-NCIHRDVKPENILI 135
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 49/90 (54%), Gaps = 11/90 (12%)
Query: 306 KLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLG-SKYSTPADLWSFACICFELATGDV 361
KL DFG A + +++ TR YR PE+L+G ++Y P D+W+ C+ EL +G
Sbjct: 142 KLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQYGPPVDVWAIGCVFAELLSGVP 201
Query: 362 LFDPHSGDNYDRDEDHLALMMELLG-MMPR 390
L+ S D D L L+ + LG ++PR
Sbjct: 202 LWPGKS------DVDQLYLIRKTLGDLIPR 225
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ G VLF G ++ D ++E LG P + R +
Sbjct: 217 EMIKGGVLF---PGTDHI---DQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYS 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 271 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV---WYD 326
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 327 PSEAEAPPP----KIPDK---QLDERE 346
Score = 45.4 bits (106), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ G VLF G ++ D ++E LG P + R +
Sbjct: 217 EMIKGGVLF---PGTDHI---DQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYS 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 271 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV---WYD 326
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 327 PSEAEAPPP----KIPDK---QLDERE 346
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 158 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 217
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ G VLF G ++ D ++E LG P + R +
Sbjct: 218 EMIKGGVLF---PGTDHI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS 271
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 272 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV---WYD 327
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 328 PSEAEAPPP----KIPDK---QLDERE 347
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/172 (28%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 21 GTEDYRRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKS 77
G+ R +++V +GD TF RY +G G V A+D VA+K + +
Sbjct: 2 GSRSKRDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRP 61
Query: 78 AQHYTEA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGEN 133
Q+ T A A E+ ++K + + K ++ LL+ F + S Q V +V E + N
Sbjct: 62 FQNQTHAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDAN 115
Query: 134 LLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
L +I+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 116 LCQVIQME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 162
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ G VLF G ++ D ++E LG P + R +
Sbjct: 217 EMIKGGVLF---PGTDHI---DQWNKVIEQLGTPSPEFMKKLQPTVRTYVENRPKYAGYS 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 271 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV---WYD 326
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 327 PSEAEAPPP----KIPDK---QLDERE 346
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ G VLF G ++ D ++E LG P + R +
Sbjct: 217 EMIKGGVLF---PGTDHI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 271 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV---WYD 326
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 327 PSEAEAPPP----KIPDK---QLDERE 346
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y DLWS CI
Sbjct: 162 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMG 221
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R +
Sbjct: 222 EMVCHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS 275
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 276 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW---YD 331
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 332 PSEAEAPPP----KIPDK---QLDERE 351
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 11 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 70
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 71 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 124
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 125 QME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 166
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + + K+ DFG A +++T++I T YR P+VL+GSK YST D+WS
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYSTTIDIWSVG 188
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLG 386
CI E+ G LF S + D L + +LG
Sbjct: 189 CIFAEMVNGTPLFPGVS------EADQLMRIFRILG 218
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDT--QTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDP 100
+Y K+G G + V+ A + +T ++++K + + EI ILK++ +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN- 61
Query: 101 DDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILV 160
+VKL D + + +VFE+L ++L L+ + G+ K +L
Sbjct: 62 -----IVKLYDVIH----TKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLN 111
Query: 161 GLDHLHRELSIIHTDLKPENVLL 183
G+ + H + ++H DLKP+N+L+
Sbjct: 112 GIAYCH-DRRVLHRDLKPQNLLI 133
>pdb|2CMW|A Chain A, Structure Of Human Casein Kinase 1 Gamma-1 In Complex With
2-(2-Hydroxyethylamino)-6-(3-Chloroanilino)-9-
Isopropylpurine (Casp Target)
Length = 310
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 40/138 (28%), Positives = 66/138 (47%), Gaps = 11/138 (7%)
Query: 46 VQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
V K+G G+F + L + T+ YVA+K++ + L E + KQ+
Sbjct: 4 VGKKIGCGNFGELRLGKNLYTNEYVAIKLEPIKSRAPQLHL-EYRFYKQLGSAGEG---- 58
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
L + GP G++ MV E LG +L L D R L V I +L ++++
Sbjct: 59 ----LPQVYYFGPXGKYNAMVLELLGPSLEDLFDLCD-RTFTLKTVLMIAIQLLSRMEYV 113
Query: 166 HRELSIIHTDLKPENVLL 183
H + ++I+ D+KPEN L+
Sbjct: 114 HSK-NLIYRDVKPENFLI 130
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 59/207 (28%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T T + TR YR PEV+LG Y DLWS CI
Sbjct: 151 IVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMG 210
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R +
Sbjct: 211 EMVCHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS 264
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 265 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW---YD 320
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 321 PSEAEAPP----PKIPDK---QLDERE 340
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 79/165 (47%), Gaps = 18/165 (10%)
Query: 28 GGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEA 84
+++V +GD TF RY +G G V A+D VA+K + + Q+ T A
Sbjct: 2 NNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQTHA 61
Query: 85 --ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLIKY 140
A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I+
Sbjct: 62 KRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVIQM 115
Query: 141 ADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 116 E----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 155
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + + K+ DFG A +++T+++ T YR P+VL+GSK YST D+WS
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVG 188
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLG 386
CI E+ G LF S + D L + +LG
Sbjct: 189 CIFAEMVNGTPLFPGVS------EADQLMRIFRILG 218
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDT--QTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDP 100
+Y K+G G + V+ A + +T ++++K + + EI ILK++ +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN- 61
Query: 101 DDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILV 160
+VKL D + + +VFE+L ++L L+ + G+ K +L
Sbjct: 62 -----IVKLYDVIH----TKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLN 111
Query: 161 GLDHLHRELSIIHTDLKPENVLL 183
G+ + H + ++H DLKP+N+L+
Sbjct: 112 GIAYCH-DRRVLHRDLKPQNLLI 133
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A F + + TR YR PEV+LG Y DLWS CI
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R +
Sbjct: 217 EMVCHKILF---PGRDYI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 271 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW---YD 326
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 327 PSEAEAPP----PKIPDK---QLDERE 346
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 86/207 (41%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A T + TR YR PEV+LG Y D+WS CI
Sbjct: 159 IVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 218
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ G VLF G ++ D ++E LG P + R +
Sbjct: 219 EMIKGGVLF---PGTDHI---DQWNKVIEQLGTPCPEFMKKLQPTVRTYVENRPKYAGYS 272
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 273 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINV---WYD 328
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 329 PSEAEAPPP----KIPDK---QLDERE 348
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 8 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 67
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 68 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 121
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 122 QME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 163
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 77/176 (43%), Gaps = 24/176 (13%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQ------FTNDIQTRQYRCPEVLLGSK-YSTPADLWSF 349
LL K+ DFG A + T + TR YR PE++L SK Y+ D+WS
Sbjct: 175 LLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLNSKGYTKSIDIWSV 234
Query: 350 ACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL 409
CI E+ + +F G +Y +H +LG++ G S++ N ++
Sbjct: 235 GCILAEMLSNRPIF---PGKHYLDQLNH------ILGIL-------GSPSQEDLNCIINM 278
Query: 410 RHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
+ L+ P + F + D+ + D L +L F P KR T + L HP++
Sbjct: 279 KARNYLQSLPSKTKVAWAKLFPKSDSKAL-DLLDRMLTFNPNKRITVEEALAHPYL 333
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 69/160 (43%), Gaps = 20/160 (12%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY +G G + V A+D VA+K +H Y + L EI+IL
Sbjct: 36 GQPFDVGPRYTQLQYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQIL 95
Query: 93 KQIAEGDPDDKKCVVKLLDHFKHSGPNGQH-VCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + V+ + D + S V +V + + +L L+K
Sbjct: 96 LRFRHEN------VIGIRDILRASTLEAMRDVYIVQDLMETDLYKLLKSQQLSN------ 143
Query: 152 KEICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
IC+ IL GL ++H +++H DLKP N+L+ + D
Sbjct: 144 DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLINTTCD 182
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 51/96 (53%), Gaps = 10/96 (10%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + + K+ DFG A +++T+++ T YR P+VL+GSK YST D+WS
Sbjct: 129 QNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYSTTIDIWSVG 188
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLG 386
CI E+ G LF S + D L + +LG
Sbjct: 189 CIFAEMVNGAPLFPGVS------EADQLMRIFRILG 218
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/143 (24%), Positives = 69/143 (48%), Gaps = 14/143 (9%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDT--QTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDP 100
+Y K+G G + V+ A + +T ++++K + + EI ILK++ +
Sbjct: 3 KYHGLEKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSN- 61
Query: 101 DDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILV 160
+VKL D + + +VFE+L ++L L+ + G+ K +L
Sbjct: 62 -----IVKLYDVIH----TKKRLVLVFEHLDQDLKKLLDVCE-GGLESVTAKSFLLQLLN 111
Query: 161 GLDHLHRELSIIHTDLKPENVLL 183
G+ + H + ++H DLKP+N+L+
Sbjct: 112 GIAYCH-DRRVLHRDLKPQNLLI 133
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 87/207 (42%), Gaps = 20/207 (9%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFACICF 354
++ D K++DFG A F + + TR YR PEV+LG Y D+WS CI
Sbjct: 157 IVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMG 216
Query: 355 ELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-MPRKIAFGGRYSRDFFNRHGDLRHIR 413
E+ +LF G +Y D ++E LG P + R++
Sbjct: 217 EMVCHKILF---PGRDYI---DQWNKVIEQLGTPCPAFMKKLQPTVRNYVENRPKYAGYS 270
Query: 414 RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLE 473
+ +P + + + ++ A+ D L +L KR + + L HP+INV +
Sbjct: 271 FEKLFP-DVLFPADSEHNKLKASQARDLLSKMLVIDASKRISVDEALQHPYINVW---YD 326
Query: 474 PSMAATQPQDTGGSISDKNRREKDERE 500
PS A P I DK + DERE
Sbjct: 327 PSEAEAPP----PKIPDK---QLDERE 346
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 48/167 (28%), Positives = 80/167 (47%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKCV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLCQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +L G+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLCGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSK 339
I++D K PS ++ D K++DFG A T T + TR YR PEV+LG
Sbjct: 148 IHRDLK-PSN-----IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 340 YSTPADLWSFACICFELATGDVLF 363
Y D+WS I E+ G VLF
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLF 225
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVVAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKVV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +LVG+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLVGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/84 (38%), Positives = 42/84 (50%), Gaps = 8/84 (9%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSK 339
I++D K PS ++ D K++DFG A T T + TR YR PEV+LG
Sbjct: 148 IHRDLK-PSN-----IVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMG 201
Query: 340 YSTPADLWSFACICFELATGDVLF 363
Y D+WS I E+ G VLF
Sbjct: 202 YKENVDIWSVGVIMGEMIKGGVLF 225
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 81/167 (48%), Gaps = 18/167 (10%)
Query: 26 RRGGYHAVRMGD-TFKN-GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYT 82
R +++V +GD TF RY +G G V A+D VA+K + + Q+ T
Sbjct: 6 RDNNFYSVEIGDSTFTVLKRYQNLKPIGSGAQGIVCAAYDAILERNVAIKKLSRPFQNQT 65
Query: 83 EA--ALDEIKILKQIAEGDPDDKKCVVKLLDHF--KHSGPNGQHVCMVFEYLGENLLTLI 138
A A E+ ++K + + K ++ LL+ F + S Q V +V E + NL +I
Sbjct: 66 HAKRAYRELVLMKVV------NHKNIIGLLNVFTPQKSLEEFQDVYIVMELMDANLSQVI 119
Query: 139 KYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ + + + + +LVG+ HLH IIH DLKP N+++ S
Sbjct: 120 QME----LDHERMSYLLYQMLVGIKHLHSA-GIIHRDLKPSNIVVKS 161
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/179 (26%), Positives = 78/179 (43%), Gaps = 37/179 (20%)
Query: 302 DLKCKLVDFGNA-----CWTYK-QFTNDIQTRQYRCPEVLLG-SKYSTPADLWSFACICF 354
DL K+ DFG A +++K + + T+ YR P +LL + Y+ D+W+ CI
Sbjct: 157 DLVLKIGDFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFA 216
Query: 355 ELATGDVLF-DPHSGDNYDRDEDHLALM-----MELLGMMPRKIAFGGRYSRDFFNRHGD 408
E+ TG LF H + + + ++ ELL ++P I D H
Sbjct: 217 EMLTGKTLFAGAHELEQMQLILESIPVVHEEDRQELLSVIPVYI------RNDMTEPHK- 269
Query: 409 LRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
PL ++L + + DFL IL F P R TA + L+HP++++
Sbjct: 270 ----------PLTQLL-------PGISREAVDFLEQILTFSPMDRLTAEEALSHPYMSI 311
Score = 35.8 bits (81), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 71/157 (45%), Gaps = 31/157 (19%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKILKQIAEGDPD 101
RY+ LG G V+ A D VA+K + + + AL EIKI++++
Sbjct: 12 RYMDLKPLGCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKHALREIKIIRRL------ 65
Query: 102 DKKCVVKLLDHFKHSGPNGQH-------------VCMVFEYLGENLLTLIKYADYRGVPL 148
D +VK+ F+ GP+G V +V EY+ +L +++ PL
Sbjct: 66 DHDNIVKV---FEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLEQG-----PL 117
Query: 149 --HMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ + +L GL ++H +++H DLKP N+ +
Sbjct: 118 LEEHARLFMYQLLRGLKYIHSA-NVLHRDLKPANLFI 153
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 79/177 (44%), Gaps = 43/177 (24%)
Query: 306 KLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGS-KYSTPADLWSFACICFELATGDV 361
KL DFG A + + +++ TR YR PE+L+G KY D+W+ C+ E+ G+
Sbjct: 164 KLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGEP 223
Query: 362 LFDPHSGDNYDRDEDHLALMMELLG-MMPRKIAFGGRYSRDFFNRHGDLRHIR------- 413
LF D D D L +M LG ++PR ++ FN++ +R
Sbjct: 224 LFPG------DSDIDQLYHIMMCLGNLIPR--------HQELFNKNPVFAGVRLPEIKER 269
Query: 414 ---RLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
R+ L++V+I D ++K L P+KRP A+ L H + +
Sbjct: 270 EPLERRYPKLSEVVI---DLAKK-----------CLHIDPDKRPFCAELLHHDFFQM 312
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 39/142 (27%), Positives = 68/142 (47%), Gaps = 25/142 (17%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G + V + T VA+K + E+ D+ K++K+IA + +KL
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIK------KFLES--DDDKMVKKIAMRE-------IKL 77
Query: 110 LDHFKHSG-PNGQHVC-------MVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVG 161
L +H N VC +VFE++ +L ++ G+ +V++ F I+ G
Sbjct: 78 LKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFP-NGLDYQVVQKYLFQIING 136
Query: 162 LDHLHRELSIIHTDLKPENVLL 183
+ H +IIH D+KPEN+L+
Sbjct: 137 IGFCHSH-NIIHRDIKPENILV 157
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 239
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 240 -----ILGIL-------GSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 287
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 288 -DLLDKMLTFNPHKRIEVEQALAHPYL 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 93 KQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
+ + +++ + + V +V + + +L L+K H+
Sbjct: 76 LRFRHENIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLSN 123
Query: 153 E-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 124 DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 162
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV----QKSAQHYTEAALDEIKILKQIAEG 98
RY Q LG G F V L D T A+KV Q + E+ L E+++LKQ+
Sbjct: 51 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 107
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFE-YLGENLL-TLIKYADYRGVPLHMVKEICF 156
D ++KL + F+ G + +V E Y G L +I + V I
Sbjct: 108 ---DHPNIMKLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIR 157
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
+L G+ ++H+ I+H DLKPEN+LL S
Sbjct: 158 QVLSGITYMHKN-KIVHRDLKPENLLLES 185
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV----QKSAQHYTEAALDEIKILKQIAEG 98
RY Q LG G F V L D T A+KV Q + E+ L E+++LKQ+
Sbjct: 50 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 106
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFE-YLGENLL-TLIKYADYRGVPLHMVKEICF 156
D ++KL + F+ G + +V E Y G L +I + V I
Sbjct: 107 ---DHPNIMKLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIR 156
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
+L G+ ++H+ I+H DLKPEN+LL S
Sbjct: 157 QVLSGITYMHKN-KIVHRDLKPENLLLES 184
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 50.1 bits (118), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 239
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 240 -----ILGIL-------GSPSQEDLNXIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 287
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 288 -DLLDKMLTFNPHKRIEVEQALAHPYL 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 93 KQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
+ + +++ + + V +V + + +L L+K H+
Sbjct: 76 LRFRHENIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLSN 123
Query: 153 E-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 124 DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 162
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 241
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 242 -----ILGIL-------GSPSQEDLNCGINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 289
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 290 -DLLDKMLTFNPHKRIEVEQALAHPYL 315
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ ++ + D + + + V +V + + +L L+K H+
Sbjct: 78 LAFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 124
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 125 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTSD 164
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 259
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 260 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 307
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 308 -DLLDKMLTFNPHKRIEVEQALAHPYL 333
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 93 KQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
+ + +++ + + V +V +G +L L+K H+
Sbjct: 96 LRFRHENIIGINDIIR-----APTIEQMKDVYLVTHLMGADLYKLLKTQ-------HLSN 143
Query: 153 E-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 144 DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 182
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV----QKSAQHYTEAALDEIKILKQIAEG 98
RY Q LG G F V L D T A+KV Q + E+ L E+++LKQ+
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 83
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFE-YLGENLL-TLIKYADYRGVPLHMVKEICF 156
D ++KL + F+ G + +V E Y G L +I + V I
Sbjct: 84 ---DHPNIMKLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIR 133
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
+L G+ ++H+ I+H DLKPEN+LL S
Sbjct: 134 QVLSGITYMHKN-KIVHRDLKPENLLLES 161
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 49.3 bits (116), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 23/156 (14%)
Query: 35 MGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV-------QKSAQHYTEAALD 87
+ D G Y + LG G F V LA+ T T VALK+ + Q E +
Sbjct: 6 LADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREIS 65
Query: 88 EIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVP 147
+++L+ ++KL D K + + MV EY G L I D +
Sbjct: 66 YLRLLRH---------PHIIKLYDVIK----SKDEIIMVIEYAGNELFDYIVQRD--KMS 110
Query: 148 LHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ I+ +++ HR I+H DLKPEN+LL
Sbjct: 111 EQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLL 145
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 204 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 259
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 260 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 307
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 308 -DLLDKMLTFNPHKRIEVEQALAHPYL 333
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 36 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 95
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 96 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 142
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 143 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 182
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 23/156 (14%)
Query: 35 MGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV-------QKSAQHYTEAALD 87
+ D G Y + LG G F V LA+ T T VALK+ + Q E +
Sbjct: 7 LADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREIS 66
Query: 88 EIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVP 147
+++L+ ++KL D K + + MV EY G L I D +
Sbjct: 67 YLRLLRH---------PHIIKLYDVIK----SKDEIIMVIEYAGNELFDYIVQRD--KMS 111
Query: 148 LHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ I+ +++ HR I+H DLKPEN+LL
Sbjct: 112 EQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLL 146
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 66/156 (42%), Gaps = 23/156 (14%)
Query: 35 MGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV-------QKSAQHYTEAALD 87
+ D G Y + LG G F V LA+ T T VALK+ + Q E +
Sbjct: 1 LADGAHIGNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREIS 60
Query: 88 EIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVP 147
+++L+ ++KL D K + + MV EY G L I D +
Sbjct: 61 YLRLLRH---------PHIIKLYDVIK----SKDEIIMVIEYAGNELFDYIVQRD--KMS 105
Query: 148 LHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ I+ +++ HR I+H DLKPEN+LL
Sbjct: 106 EQEARRFFQQIISAVEYCHRH-KIVHRDLKPENLLL 140
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 243
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 244 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 291
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 292 -DLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKIL 79
Query: 93 KQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
+ + +++ + + V +V + + +L L+K H+
Sbjct: 80 LRFRHENIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLSN 127
Query: 153 E-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 128 DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 166
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 241
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 242 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 289
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 290 -DLLDKMLTFNPHKRIEVEQALAHPYL 315
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ ++ + D + + + V +V + + +L L+K H+
Sbjct: 78 LAFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 124
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 125 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 164
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 243
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 244 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 291
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 292 -DLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 93 KQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
+ + +++ + + V +V + + +L L+K H+
Sbjct: 80 LRFRHENIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLSN 127
Query: 153 E-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 128 DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 166
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 48.9 bits (115), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 18/152 (11%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALD-EIKILKQIAEGDPD 101
Y + LG G FS V LA D +T VA+K + K A E +++ EI +L +I +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVLHKIKHPN-- 77
Query: 102 DKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICFHIL 159
+V L D ++ +G H+ ++ + + GE +++ Y + F +L
Sbjct: 78 ----IVALDDIYE----SGGHLYLIMQLVSGGELFDRIVEKGFYTE---RDASRLIFQVL 126
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMSMIDPSK 191
+ +LH +L I+H DLKPEN+L S+ + SK
Sbjct: 127 DAVKYLH-DLGIVHRDLKPENLLYYSLDEDSK 157
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 49/144 (34%), Gaps = 52/144 (36%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T Y PEVL YS D WS I + L G F YD ++ L
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF-------YDENDAKL------- 226
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMAD----F 441
++L +Y+F +D++D F
Sbjct: 227 ----------------------------------FEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 442 LVPILDFVPEKRPTAAQCLTHPWI 465
+ +++ PEKR T Q L HPWI
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 239
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 240 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 287
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 288 -DLLDKMLTFNPHKRIEVEQALAHPYL 313
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 72/160 (45%), Gaps = 20/160 (12%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 93 KQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
+ + +++ + + V +V + + +L L+K H+
Sbjct: 76 LRFRHENIIGINDIIR-----APTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLSN 123
Query: 153 E-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 124 DHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTXD 162
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 189 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 244
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 245 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 292
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 293 -DLLDKMLTFNPHKRIEVEQALAHPYL 318
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 81 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 127
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 128 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 167
>pdb|3SV0|A Chain A, Crystal Structure Of Casein Kinase-1 Like Protein In Plant
Length = 483
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 38/150 (25%), Positives = 73/150 (48%), Gaps = 17/150 (11%)
Query: 34 RMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILK 93
R+G+ F+ GR K+G G F ++L + QT+ VA+K++ + + L E KI +
Sbjct: 4 RVGNKFRLGR-----KIGSGSFGEIYLGTNIQTNEEVAIKLENVKTKHPQ-LLYESKIYR 57
Query: 94 QIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE 153
+ G + + + G G + +V + LG +L L + R + L V
Sbjct: 58 ILQGGTG---------IPNVRWFGVEGDYNVLVMDLLGPSLEDLFNFCS-RKLSLKTVLM 107
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ ++ ++ +H + S +H D+KP+N L+
Sbjct: 108 LADQMINRVEFVHSK-SFLHRDIKPDNFLM 136
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 190 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 245
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 246 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 293
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 294 -DLLDKMLTFNPHKRIEVEQALAHPYL 319
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 22 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 81
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 82 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 128
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 129 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 168
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 181 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 236
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 237 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 284
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 285 -DLLDKMLTFNPHKRIEVEQALAHPYL 310
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 13 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 72
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 73 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 119
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 120 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 159
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 243
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 244 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 291
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 292 -DLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 80 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 126
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 127 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 166
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 239
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 240 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 287
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 288 -DLLDKMLTFNPHKRIEVEQALAHPYL 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 76 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 122
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 123 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 162
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 186 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 241
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 242 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 289
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 290 -DLLDKMLTFNPHKRIEVEQALAHPYL 315
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 18 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 77
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 78 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 124
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 125 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 164
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 192 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 247
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 248 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 295
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 296 -DLLDKMLTFNPHKRIEVEQALAHPYL 321
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 24 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 83
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 84 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 130
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 131 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 170
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 184 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 239
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 240 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 287
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 288 -DLLDKMLTFNPHKRIEVEQALAHPYL 313
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 16 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKIL 75
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 76 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 122
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 123 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 162
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 237
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 238 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 285
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 286 -DLLDKMLTFNPHKRIEVEQALAHPYL 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 74 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 120
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 121 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 160
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 243
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 244 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 291
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 292 -DLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 80 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKCQ-------HLS 126
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 127 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 166
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 65/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H
Sbjct: 188 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNH- 243
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
+LG++ G S++ N +L+ L P + F D+ +
Sbjct: 244 -----ILGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL 291
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 292 -DLLDKMLTFNPHKRIEVEQALAHPYL 317
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 44/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA++ +H Y + L EIKIL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKIL 79
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 80 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 126
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 127 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 166
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 18/152 (11%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALD-EIKILKQIAEGDPD 101
Y + LG G FS V LA D +T VA+K + K A E +++ EI +L +I +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN-- 77
Query: 102 DKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICFHIL 159
+V L D ++ +G H+ ++ + + GE +++ Y + F +L
Sbjct: 78 ----IVALDDIYE----SGGHLYLIMQLVSGGELFDRIVEKGFYTE---RDASRLIFQVL 126
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMSMIDPSK 191
+ +LH +L I+H DLKPEN+L S+ + SK
Sbjct: 127 DAVKYLH-DLGIVHRDLKPENLLYYSLDEDSK 157
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 49/144 (34%), Gaps = 52/144 (36%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T Y PEVL YS D WS I + L G F YD ++ L
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF-------YDENDAKL------- 226
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMAD----F 441
++L +Y+F +D++D F
Sbjct: 227 ----------------------------------FEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 442 LVPILDFVPEKRPTAAQCLTHPWI 465
+ +++ PEKR T Q L HPWI
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|3RP9|A Chain A, Crystal Structure Of The Apo Mapk From Toxoplasma Gondii,
25.M01780 Or Tgme49_007820
Length = 458
Score = 48.5 bits (114), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 78/206 (37%), Gaps = 50/206 (24%)
Query: 307 LVDFGNACWTYKQFTNDIQTRQYRCPE-VLLGSKYSTPADLWSFACICFELAT------- 358
LV F + +Q T + TR YR PE +LL Y+ D+WS CI EL
Sbjct: 227 LVTFPHTKNLKRQLTGHVVTRWYRAPELILLQENYTEAIDVWSIGCIFAELLNMIKENVA 286
Query: 359 ----------GDVLF----DPHSGDNYDR----DEDHLALMMELLG------MMPRKIAF 394
G F D +G+++ + D L ++ +LG + +
Sbjct: 287 YHADRGPLFPGSSCFPLSPDQKAGNDFKFHTRGNRDQLNVIFNILGTPSEEDIEALEKED 346
Query: 395 GGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRP 454
RY R F R G L E++ S DA L +L F P KR
Sbjct: 347 AKRYIRIFPKREG--------------TDLAERFPASSADA---IHLLKRMLVFNPNKRI 389
Query: 455 TAAQCLTHPWINVGPRLLEPSMAATQ 480
T +CL HP+ R+ E AT+
Sbjct: 390 TINECLAHPFFK-EVRIAEVETNATE 414
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 40/142 (28%), Positives = 67/142 (47%), Gaps = 7/142 (4%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDD 102
RY ++ +G G + V A+D VA+ K E +D +IL++IA + +
Sbjct: 54 RYEIRHLIGTGSYGHVCEAYDKLEKRVVAI---KKILRVFEDLIDCKRILREIAILNRLN 110
Query: 103 KKCVVKLLD-HFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVG 161
VVK+LD + +V E + L + Y LH +K + +++LVG
Sbjct: 111 HDHVVKVLDIVIPKDVEKFDELYVVLEIADSDFKKLFRTPVYL-TELH-IKTLLYNLLVG 168
Query: 162 LDHLHRELSIIHTDLKPENVLL 183
+ ++H I+H DLKP N L+
Sbjct: 169 VKYVH-SAGILHRDLKPANCLV 189
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 64/149 (42%), Gaps = 23/149 (15%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV-------QKSAQHYTEAALDEIKILKQ 94
G Y + LG G F V LA+ T T VALK+ + Q E + +++L+
Sbjct: 4 GNYQIVKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRH 63
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
++KL D K + + MV EY G L I D + +
Sbjct: 64 ---------PHIIKLYDVIK----SKDEIIMVIEYAGNELFDYIVQRD--KMSEQEARRF 108
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLL 183
I+ +++ HR I+H DLKPEN+LL
Sbjct: 109 FQQIISAVEYCHRH-KIVHRDLKPENLLL 136
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 18/152 (11%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALD-EIKILKQIAEGDPD 101
Y + LG G FS V LA D +T VA+K + K A E +++ EI +L +I +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN-- 77
Query: 102 DKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICFHIL 159
+V L D ++ +G H+ ++ + + GE +++ Y + F +L
Sbjct: 78 ----IVALDDIYE----SGGHLYLIMQLVSGGELFDRIVEKGFYTE---RDASRLIFQVL 126
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMSMIDPSK 191
+ +LH +L I+H DLKPEN+L S+ + SK
Sbjct: 127 DAVKYLH-DLGIVHRDLKPENLLYYSLDEDSK 157
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 49/144 (34%), Gaps = 52/144 (36%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T Y PEVL YS D WS I + L G F YD ++ L
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF-------YDENDAKL------- 226
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMAD----F 441
++L +Y+F +D++D F
Sbjct: 227 ----------------------------------FEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 442 LVPILDFVPEKRPTAAQCLTHPWI 465
+ +++ PEKR T Q L HPWI
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGD 99
+Y K+G G + TV+ A + +T VALK + + +AL EI +LK++
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-- 60
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPL--HMVKEICFH 157
K +V+L D HS + + +VFE+ ++ L KY D L +VK F
Sbjct: 61 ----KNIVRLHDVL-HS---DKKLTLVFEFCDQD---LKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLL 183
+L GL H +++H DLKP+N+L+
Sbjct: 110 LLKGLGFCHSR-NVLHRDLKPQNLLI 134
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 51/97 (52%), Gaps = 11/97 (11%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + + KL +FG A + ++ ++ T YR P+VL G+K YST D+WS
Sbjct: 130 QNLLINRNGELKLANFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG 189
Query: 351 CICFELA-TGDVLFDPHSGDNYDRDEDHLALMMELLG 386
CI ELA G LF G++ D D L + LLG
Sbjct: 190 CIFAELANAGRPLF---PGNDVD---DQLKRIFRLLG 220
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 74/146 (50%), Gaps = 19/146 (13%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGD 99
+Y K+G G + TV+ A + +T VALK + + +AL EI +LK++
Sbjct: 3 KYEKLEKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKH-- 60
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPL--HMVKEICFH 157
K +V+L D HS + + +VFE+ ++ L KY D L +VK F
Sbjct: 61 ----KNIVRLHDVL-HS---DKKLTLVFEFCDQD---LKKYFDSCNGDLDPEIVKSFLFQ 109
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLL 183
+L GL H +++H DLKP+N+L+
Sbjct: 110 LLKGLGFCHSR-NVLHRDLKPQNLLI 134
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 49/96 (51%), Gaps = 9/96 (9%)
Query: 295 KELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFA 350
+ LL + + KL DFG A + ++ ++ T YR P+VL G+K YST D+WS
Sbjct: 130 QNLLINRNGELKLADFGLARAFGIPVRCYSAEVVTLWYRPPDVLFGAKLYSTSIDMWSAG 189
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLG 386
CI ELA P G++ D D L + LLG
Sbjct: 190 CIFAELANAARPLFP--GNDVD---DQLKRIFRLLG 220
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 48.5 bits (114), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 49/93 (52%), Gaps = 9/93 (9%)
Query: 297 LLAAVDLKCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPA-DLWSFACIC 353
L+ + D KL DFG+A + I +R YR PE++LG+ TP+ DLWS C+
Sbjct: 173 LVNSKDNTLKLCDFGSAKKLIPSEPSVAXICSRFYRAPELMLGATEYTPSIDLWSIGCVF 232
Query: 354 FELATGDVLFDPHSGDNYDRDEDHLALMMELLG 386
EL G LF SG+ D L +++++G
Sbjct: 233 GELILGKPLF---SGET---SIDQLVRIIQIMG 259
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 40/179 (22%), Positives = 73/179 (40%), Gaps = 46/179 (25%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDD 102
+Y + LG G F V +D ++ ALK Y LD +K+L D
Sbjct: 8 KYSLGKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRELDIMKVL---------D 58
Query: 103 KKCVVKLLDHF----------------------KHSGPNGQH------------VCMVFE 128
++KL+D+F K++G N H + ++ E
Sbjct: 59 HVNIIKLVDYFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIME 118
Query: 129 YLGENLLTLIK--YADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
Y+ + L ++K R +P++++ + + + +H L I H D+KP+N+L+ S
Sbjct: 119 YVPDTLHKVLKSFIRSGRSIPMNLISIYIYQLFRAVGFIH-SLGICHRDIKPQNLLVNS 176
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 77/152 (50%), Gaps = 18/152 (11%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALD-EIKILKQIAEGDPD 101
Y + LG G FS V LA D +T VA+K + K A E +++ EI +L +I +
Sbjct: 20 YDFRDVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVLHKIKHPN-- 77
Query: 102 DKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICFHIL 159
+V L D ++ +G H+ ++ + + GE +++ Y + F +L
Sbjct: 78 ----IVALDDIYE----SGGHLYLIMQLVSGGELFDRIVEKGFYTE---RDASRLIFQVL 126
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMSMIDPSK 191
+ +LH +L I+H DLKPEN+L S+ + SK
Sbjct: 127 DAVKYLH-DLGIVHRDLKPENLLYYSLDEDSK 157
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 49/144 (34%), Gaps = 52/144 (36%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T Y PEVL YS D WS I + L G F YD ++ L
Sbjct: 181 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF-------YDENDAKL------- 226
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMAD----F 441
++L +Y+F +D++D F
Sbjct: 227 ----------------------------------FEQILKAEYEFDSPYWDDISDSAKDF 252
Query: 442 LVPILDFVPEKRPTAAQCLTHPWI 465
+ +++ PEKR T Q L HPWI
Sbjct: 253 IRHLMEKDPEKRFTCEQALQHPWI 276
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 62/145 (42%), Gaps = 9/145 (6%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPD 101
G + + +G G + V+ +T A+KV E EI +LK+ +
Sbjct: 24 GIFELVELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSH---- 79
Query: 102 DKKCVVKLLDHFKHSGPNGQ--HVCMVFEYLGENLLT-LIKYADYRGVPLHMVKEICFHI 158
+ + F P G + +V E+ G +T LIK + + IC I
Sbjct: 80 -HRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAYICREI 138
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
L GL HLH+ +IH D+K +NVLL
Sbjct: 139 LRGLSHLHQH-KVIHRDIKGQNVLL 162
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 8/73 (10%)
Query: 295 KELLAAVDLKCKLVDFGNACW---TYKQFTNDIQTRQYRCPEVLL-----GSKYSTPADL 346
+ +L + + KLVDFG + T + I T + PEV+ + Y +DL
Sbjct: 158 QNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEVIACDENPDATYDFKSDL 217
Query: 347 WSFACICFELATG 359
WS E+A G
Sbjct: 218 WSLGITAIEMAEG 230
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/134 (26%), Positives = 64/134 (47%), Gaps = 7/134 (5%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G FS V + QT A+K+ + + + + D++ + +L
Sbjct: 69 IGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNG--DRRWITQL 126
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHREL 169
HF N ++ M + Y+G +LLTL+ R +P M + I++ +D +HR L
Sbjct: 127 --HFAFQDENYLYLVMEY-YVGGDLLTLLSKFGER-IPAEMARFYLAEIVMAIDSVHR-L 181
Query: 170 SIIHTDLKPENVLL 183
+H D+KP+N+LL
Sbjct: 182 GYVHRDIKPDNILL 195
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 324 IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMM 382
+ TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H+
Sbjct: 192 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNHI---- 244
Query: 383 ELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFL 442
LG++ G S++ N +L+ L P + F D+ + D L
Sbjct: 245 --LGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLL 294
Query: 443 VPILDFVPEKRPTAAQCLTHPWI 465
+L F P KR Q L HP++
Sbjct: 295 DKMLTFNPHKRIEVEQALAHPYL 317
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 20 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 79
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 80 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 126
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 127 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 166
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 64/143 (44%), Gaps = 18/143 (12%)
Query: 324 IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMM 382
+ TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y +H+
Sbjct: 193 VATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHYLDQLNHI---- 245
Query: 383 ELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFL 442
LG++ G S++ N +L+ L P + F D+ + D L
Sbjct: 246 --LGIL-------GSPSQEDLNCIINLKARNYLLSLPHKNKVPWNRLFPNADSKAL-DLL 295
Query: 443 VPILDFVPEKRPTAAQCLTHPWI 465
+L F P KR Q L HP++
Sbjct: 296 DKMLTFNPHKRIEVEQALAHPYL 318
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 21 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 80
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 81 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 127
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 128 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 167
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 66/147 (44%), Gaps = 18/147 (12%)
Query: 320 FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T + TR YR PE++L SK Y+ D+WS CI E+ + +F G +Y D L
Sbjct: 182 LTEYVATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNRPIF---PGKHY---LDQL 235
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
++ +LG P + + N L H ++ P N++ F D+ +
Sbjct: 236 NHILGILG-SPEQEDLNCIINLKARNYLLSLPHKNKV---PWNRL------FPNADSKAL 285
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L F P KR Q L HP++
Sbjct: 286 -DLLDKMLTFNPHKRIEVEQALAHPYL 311
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 74/161 (45%), Gaps = 22/161 (13%)
Query: 36 GDTFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--YTEAALDEIKIL 92
G F G RY S +G G + V A+D VA+K +H Y + L EIKIL
Sbjct: 14 GQVFDVGPRYTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKIL 73
Query: 93 KQIAEGDPDDKKCVVKLLDHFKH-SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ + ++ + D + + + V +V + + +L L+K H+
Sbjct: 74 LRFRHEN------IIGINDIIRAPTIEQMKDVYIVQDLMETDLYKLLKTQ-------HLS 120
Query: 152 KE-ICF---HILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
+ IC+ IL GL ++H +++H DLKP N+LL + D
Sbjct: 121 NDHICYFLYQILRGLKYIHSA-NVLHRDLKPSNLLLNTTCD 160
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 16/147 (10%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDP 100
N RY + KLG G STV+LA DT + VA+K E L + +++
Sbjct: 10 NERYKIVDKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFE--REVHNSSQ 67
Query: 101 DDKKCVVKLLDHFKHSGPNGQHVC--MVFEYLGENLLTLIKYADYRGVPLHMVKEICF-- 156
+ +V ++D + + C +V EY+ TL +Y + G PL + I F
Sbjct: 68 LSHQNIVSMID------VDEEDDCYYLVMEYIEGP--TLSEYIESHG-PLSVDTAINFTN 118
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
IL G+ H H ++ I+H D+KP+N+L+
Sbjct: 119 QILDGIKHAH-DMRIVHRDIKPQNILI 144
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTE----AALDEIKILKQIAEG 98
RY KLG G + V L D T A+K+ K + T A LDE+ +LKQ+
Sbjct: 5 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL--- 61
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHI 158
D ++KL + F+ ++ M GE +I + V ++ + +
Sbjct: 62 ---DHPNIMKLYEFFED--KRNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---QV 113
Query: 159 LVGLDHLHRELSIIHTDLKPENVLLMS 185
L G +LH+ +I+H DLKPEN+LL S
Sbjct: 114 LSGTTYLHKH-NIVHRDLKPENLLLES 139
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 59/172 (34%), Gaps = 59/172 (34%)
Query: 302 DLKCKLVDFGNACW--TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
D K+VDFG + + + T Y PEVL KY D+WS I + L G
Sbjct: 143 DALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCG 201
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWP 419
+ P FGG+ ++ R
Sbjct: 202 ---YPP----------------------------FGGQTDQEILKR-------------- 216
Query: 420 LNKVLIEKYDFSE-----KDANDMADFLVPI-LDFVPEKRPTAAQCLTHPWI 465
+EK FS +D A LV + L + P KR +A + L HPWI
Sbjct: 217 -----VEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 263
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 70/149 (46%), Gaps = 20/149 (13%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV----QKSAQHYTEAALDEIKILKQIAEG 98
RY Q LG G F V L D T A+KV Q + E+ L E+++LKQ+
Sbjct: 33 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 89
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFE-YLGENLL-TLIKYADYRGVPLHMVKEICF 156
D ++KL + F+ G + +V E Y G L +I + V I
Sbjct: 90 ---DHPNIMKLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIR 139
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
+L G+ ++H+ I+H DLKPEN+LL S
Sbjct: 140 QVLSGITYMHKN-KIVHRDLKPENLLLES 167
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 68/149 (45%), Gaps = 20/149 (13%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV----QKSAQHYTEAALDEIKILKQIAEG 98
RY Q LG G F V L D T A+KV Q + E+ L E+++LKQ+
Sbjct: 27 RYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQL--- 83
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFE-YLGENLL-TLIKYADYRGVPLHMVKEICF 156
D + KL + F+ G + +V E Y G L +I + V I
Sbjct: 84 ---DHPNIXKLYEFFEDKG----YFYLVGEVYTGGELFDEIISRKRFSEVD---AARIIR 133
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
+L G+ + H+ I+H DLKPEN+LL S
Sbjct: 134 QVLSGITYXHKN-KIVHRDLKPENLLLES 161
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 35/198 (17%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNA---CWTYKQ----FTNDIQTRQYR 330
S + I++D K PS LL + + K+ DFG A C + + T + TR YR
Sbjct: 177 SAQVIHRDLK-PS-----NLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 230
Query: 331 CPEVLLG-SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMP 389
PE++L +Y+ DLWS CI E+ LF G NY L L+M +LG
Sbjct: 231 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF---PGKNYVH---QLQLIMMVLGTPS 284
Query: 390 RKI--AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILD 447
+ A G R + + + P V Y +++ A + L +L
Sbjct: 285 PAVIQAVGAERVRAYIQSLPPRQPV------PWETV----YPGADRQALSL---LGRMLR 331
Query: 448 FVPEKRPTAAQCLTHPWI 465
F P R +AA L HP++
Sbjct: 332 FEPSARISAAAALRHPFL 349
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 38 TFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAA---LDEIKILK 93
TF G Y + +G G + V A T VA+K +A A L E+KILK
Sbjct: 50 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK 109
Query: 94 QIAEGDPDDKKCVVKLLDHFKHSGPNGQH--VCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ ++ + D + + P G+ V +V + + +L +I + + + L V
Sbjct: 110 HFKHDN------IIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHV 161
Query: 152 KEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ + +L GL ++H +IH DLKP N+L+
Sbjct: 162 RYFLYQLLRGLKYMH-SAQVIHRDLKPSNLLV 192
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 60/199 (30%), Positives = 85/199 (42%), Gaps = 37/199 (18%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNA---CWTYKQ----FTNDIQTRQYR 330
S + I++D K PS LL + + K+ DFG A C + + T + TR YR
Sbjct: 176 SAQVIHRDLK-PS-----NLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYR 229
Query: 331 CPEVLLG-SKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGM-M 388
PE++L +Y+ DLWS CI E+ LF G NY L L+M +LG
Sbjct: 230 APELMLSLHEYTQAIDLWSVGCIFGEMLARRQLF---PGKNYVH---QLQLIMMVLGTPS 283
Query: 389 PRKI-AFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK-YDFSEKDANDMADFLVPIL 446
P I A G R + P V E Y +++ A + L +L
Sbjct: 284 PAVIQAVGAERVRAYIQ-----------SLPPRQPVPWETVYPGADRQALSL---LGRML 329
Query: 447 DFVPEKRPTAAQCLTHPWI 465
F P R +AA L HP++
Sbjct: 330 RFEPSARISAAAALRHPFL 348
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 15/152 (9%)
Query: 38 TFKNG-RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAA---LDEIKILK 93
TF G Y + +G G + V A T VA+K +A A L E+KILK
Sbjct: 49 TFDVGDEYEIIETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELKILK 108
Query: 94 QIAEGDPDDKKCVVKLLDHFKHSGPNGQH--VCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ ++ + D + + P G+ V +V + + +L +I + + + L V
Sbjct: 109 HFKHDN------IIAIKDILRPTVPYGEFKSVYVVLDLMESDLHQIIHSS--QPLTLEHV 160
Query: 152 KEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ + +L GL ++H +IH DLKP N+L+
Sbjct: 161 RYFLYQLLRGLKYMH-SAQVIHRDLKPSNLLV 191
>pdb|3N9X|A Chain A, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
pdb|3N9X|B Chain B, Crystal Structure Of Map Kinase From Plasmodium Berghei,
Pb000659.00.0
Length = 432
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 74/164 (45%), Gaps = 12/164 (7%)
Query: 21 GTEDYRRGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH 80
G E+ G V + D Y+++ +G G + V+LA+D T VA+ K
Sbjct: 10 GRENLYFQGIKNVHVPDN-----YIIKHLIGRGSYGYVYLAYDKNTEKNVAI---KKVNR 61
Query: 81 YTEAALDEIKILKQIAEGDPDDKKCVVKLLDH-FKHSGPNGQHVCMVFEYLGENLLTLIK 139
E +D +IL++I + +++L D + +V E +L L K
Sbjct: 62 MFEDLIDCKRILREITILNRLKSDYIIRLYDLIIPDDLLKFDELYIVLEIADSDLKKLFK 121
Query: 140 YADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ + +K I +++L+G + +H E IIH DLKP N LL
Sbjct: 122 TPIF--LTEEHIKTILYNLLLGENFIH-ESGIIHRDLKPANCLL 162
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/174 (24%), Positives = 67/174 (38%), Gaps = 40/174 (22%)
Query: 318 KQFTNDIQTRQYRCPE-VLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDR--- 373
KQ T+ + TR YR PE +LL Y+ D+WS CI EL + H D +R
Sbjct: 206 KQLTSHVVTRWYRAPELILLQENYTKSIDIWSTGCIFAELLN---MLQSHINDPTNRFPL 262
Query: 374 ----------------------DEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRH 411
+ D L ++ ++G + D
Sbjct: 263 FPGSSCFPLSPDRNSKKVHEKSNRDQLNIIFNIIGTP----------TEDDLKNINKPEV 312
Query: 412 IRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
I+ ++ +P K + K + ++D + L +L F P KR T Q L HP++
Sbjct: 313 IKYIKLFPHRKPINLKQKYPSI-SDDGINLLESMLKFNPNKRITIDQALDHPYL 365
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 69/147 (46%), Gaps = 16/147 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTE----AALDEIKILKQIAEG 98
RY KLG G + V L D T A+K+ K + T A LDE+ +LKQ+
Sbjct: 22 RYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQL--- 78
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHI 158
D ++KL + F+ ++ M GE +I + V ++ + +
Sbjct: 79 ---DHPNIMKLYEFFEDK--RNYYLVMEVYRGGELFDEIILRQKFSEVDAAVIMK---QV 130
Query: 159 LVGLDHLHRELSIIHTDLKPENVLLMS 185
L G +LH+ +I+H DLKPEN+LL S
Sbjct: 131 LSGTTYLHKH-NIVHRDLKPENLLLES 156
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 43/172 (25%), Positives = 59/172 (34%), Gaps = 59/172 (34%)
Query: 302 DLKCKLVDFGNACW--TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
D K+VDFG + + + T Y PEVL KY D+WS I + L G
Sbjct: 160 DALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCG 218
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWP 419
+ P FGG+ ++ R
Sbjct: 219 ---YPP----------------------------FGGQTDQEILKR-------------- 233
Query: 420 LNKVLIEKYDFSE-----KDANDMADFLVPI-LDFVPEKRPTAAQCLTHPWI 465
+EK FS +D A LV + L + P KR +A + L HPWI
Sbjct: 234 -----VEKGKFSFDPPDWTQVSDEAKQLVKLMLTYEPSKRISAEEALNHPWI 280
>pdb|3UYS|A Chain A, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|B Chain B, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|C Chain C, Crystal Structure Of Apo Human Ck1d
pdb|3UYS|D Chain D, Crystal Structure Of Apo Human Ck1d
pdb|3UYT|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|C Chain C, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UYT|D Chain D, Crystal Structure Of Ck1d With Pf670462 From P1 Crystal
Form
pdb|3UZP|A Chain A, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|3UZP|B Chain B, Crystal Structure Of Ck1d With Pf670462 From P21 Crystal
Form
pdb|4HNF|A Chain A, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HNF|B Chain B, Crystal Structure Of Ck1d In Complex With Pf4800567
pdb|4HGT|A Chain A, Crystal Structure Of Ck1d With Compound 13
pdb|4HGT|B Chain B, Crystal Structure Of Ck1d With Compound 13
Length = 296
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 19/156 (12%)
Query: 29 GYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALD- 87
G +R+G+ ++ GR K+G G F ++L D VA+K++ + + ++
Sbjct: 1 GSMELRVGNRYRLGR-----KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIES 55
Query: 88 EIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVP 147
+I + Q G P + C G G + MV E LG +L L + R
Sbjct: 56 KIYKMMQGGVGIPTIRWC-----------GAEGDYNVMVMELLGPSLEDLFNFCS-RKFS 103
Query: 148 LHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
L V + ++ ++++H + + IH D+KP+N L+
Sbjct: 104 LKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLM 138
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 65/167 (38%), Gaps = 47/167 (28%)
Query: 302 DLKCKLVDFG-NACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
D K++DFG + C+ D I T Y PEVL G+ Y D+WS I + L +G
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSG 218
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWP 419
F Y ++E + +E G+Y+ D P
Sbjct: 219 TPPF-------YGKNEYDILKRVE-----------TGKYAFDL----------------P 244
Query: 420 LNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ + ++D D + +L F P R TA QCL HPWI
Sbjct: 245 QWRTI----------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHY-TEAALDEIKILKQIAEGD 99
RY + LG G F V D T A+KV + SA++ T L E+++LK++
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL---- 78
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
D ++KL + + S + ++ GE +IK + H I +
Sbjct: 79 --DHPNIMKLFEILEDS--SSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIKQVF 131
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMS 185
G+ ++H+ +I+H DLKPEN+LL S
Sbjct: 132 SGITYMHKH-NIVHRDLKPENILLES 156
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYS 341
I++D K P+ LL A K+ DFG AC TN+ + + PEV GS YS
Sbjct: 128 IHRDLKPPNL-----LLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYS 182
Query: 342 TPADLWSFACICFELATGDVLFDPHSGDNY 371
D++S+ I +E+ T FD G +
Sbjct: 183 EKCDVFSWGIILWEVITRRKPFDEIGGPAF 212
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 92 LKQIAEGDPDDKKCVVKL-----LDH---FKHSGPNGQHVCMVFEYL-GENLLTLIKYAD 142
+KQI E + + K +V+L ++H K G VC+V EY G +L ++ A+
Sbjct: 37 IKQI-ESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAE 95
Query: 143 YRGVPLHMVKEI---CFHILVGLDHLH--RELSIIHTDLKPENVLLMS 185
+P + C G+ +LH + ++IH DLKP N+LL++
Sbjct: 96 --PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA 141
>pdb|1CKJ|A Chain A, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKJ|B Chain B, Casein Kinase I Delta Truncation Mutant Containing
Residues 1-317 Complex With Bound Tungstate
pdb|1CKI|A Chain A, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
pdb|1CKI|B Chain B, Recombinant Casein Kinase I Delta Truncation Mutant
Containing Residues 1-317
Length = 317
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 38/152 (25%), Positives = 71/152 (46%), Gaps = 19/152 (12%)
Query: 33 VRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALD-EIKI 91
+R+G+ ++ GR K+G G F ++L D VA+K++ + + ++ +I
Sbjct: 3 LRVGNRYRLGR-----KIGSGSFGDIYLGTDIAAGEEVAIKLECVKTKHPQLHIESKIYK 57
Query: 92 LKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+ Q G P + C G G + MV E LG +L L + R L V
Sbjct: 58 MMQGGVGIPTIRWC-----------GAEGDYNVMVMELLGPSLEDLFNFCS-RKFSLKTV 105
Query: 152 KEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ ++ ++++H + + IH D+KP+N L+
Sbjct: 106 LLLADQMISRIEYIHSK-NFIHRDVKPDNFLM 136
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 46.6 bits (109), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 43/90 (47%), Gaps = 5/90 (5%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYS 341
I++D K P+ LL A K+ DFG AC TN+ + + PEV GS YS
Sbjct: 127 IHRDLKPPNL-----LLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYS 181
Query: 342 TPADLWSFACICFELATGDVLFDPHSGDNY 371
D++S+ I +E+ T FD G +
Sbjct: 182 EKCDVFSWGIILWEVITRRKPFDEIGGPAF 211
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 54/108 (50%), Gaps = 17/108 (15%)
Query: 92 LKQIAEGDPDDKKCVVKL-----LDH---FKHSGPNGQHVCMVFEYL-GENLLTLIKYAD 142
+KQI E + + K +V+L ++H K G VC+V EY G +L ++ A+
Sbjct: 36 IKQI-ESESERKAFIVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAE 94
Query: 143 YRGVPLHMVKEI---CFHILVGLDHLH--RELSIIHTDLKPENVLLMS 185
+P + C G+ +LH + ++IH DLKP N+LL++
Sbjct: 95 --PLPYYTAAHAMSWCLQCSQGVAYLHSMQPKALIHRDLKPPNLLLVA 140
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 197 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 257 FPGDSG------VDQLVEIIKVLGTPTRE 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 112
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 173 H-SFGICHRDIKPQNLLL 189
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALD---------EIKILKQ 94
Y++ LG G V LA++ +T VA+K+ + +A + EI+ILK+
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKE 153
+ + C++K+ + F + + +V E + G L K + + K
Sbjct: 72 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKL 118
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ +L+ + +LH E IIH DLKPENVLL S
Sbjct: 119 YFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 149
>pdb|4HNI|A Chain A, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HNI|B Chain B, Crystal Structure Of Ck1e In Complex With Pf4800567
pdb|4HOK|A Chain A, Crystal Structure Of Apo Ck1e
pdb|4HOK|C Chain C, Crystal Structure Of Apo Ck1e
pdb|4HOK|E Chain E, Crystal Structure Of Apo Ck1e
pdb|4HOK|G Chain G, Crystal Structure Of Apo Ck1e
pdb|4HOK|I Chain I, Crystal Structure Of Apo Ck1e
pdb|4HOK|K Chain K, Crystal Structure Of Apo Ck1e
pdb|4HOK|M Chain M, Crystal Structure Of Apo Ck1e
pdb|4HOK|O Chain O, Crystal Structure Of Apo Ck1e
pdb|4HOK|Q Chain Q, Crystal Structure Of Apo Ck1e
pdb|4HOK|S Chain S, Crystal Structure Of Apo Ck1e
pdb|4HOK|U Chain U, Crystal Structure Of Apo Ck1e
pdb|4HOK|W Chain W, Crystal Structure Of Apo Ck1e
Length = 296
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 73/159 (45%), Gaps = 25/159 (15%)
Query: 29 GYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQ----KSAQHYTEA 84
G +R+G+ ++ GR K+G G F ++L + + VA+K++ K Q + E+
Sbjct: 1 GSMELRVGNKYRLGR-----KIGSGSFGDIYLGANIASGEEVAIKLECVKTKHPQLHIES 55
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYR 144
+ + Q G P K C G G + MV E LG +L L + R
Sbjct: 56 KFYK---MMQGGVGIPSIKWC-----------GAEGDYNVMVMELLGPSLEDLFNFCS-R 100
Query: 145 GVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
L V + ++ ++++H + + IH D+KP+N L+
Sbjct: 101 KFSLKTVLLLADQMISRIEYIHSK-NFIHRDVKPDNFLM 138
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 175 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 235 FPGDSG------VDQLVEIIKVLGTPTRE 257
Score = 38.5 bits (88), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 90
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 151 H-SFGICHRDIKPQNLLL 167
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/149 (29%), Positives = 68/149 (45%), Gaps = 23/149 (15%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK------VQKSAQHY-TEAALDEIKILKQ 94
G Y+++ LG G F V LA +T VALK ++KS H E + +K+L+
Sbjct: 9 GPYIIRETLGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRH 68
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
++KL D + P + MV EY G L I + + + +
Sbjct: 69 ---------PHIIKLYDVI--TTPTD--IVMVIEYAGGELFDYI--VEKKRMTEDEGRRF 113
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLL 183
I+ +++ HR I+H DLKPEN+LL
Sbjct: 114 FQQIICAIEYCHRH-KIVHRDLKPENLLL 141
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 46.2 bits (108), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 65/167 (38%), Gaps = 47/167 (28%)
Query: 302 DLKCKLVDFG-NACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
D K++DFG + C+ D I T Y PEVL G+ Y D+WS I + L +G
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSG 218
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWP 419
F Y ++E + +E G+Y+ D P
Sbjct: 219 TPPF-------YGKNEYDILKRVE-----------TGKYAFDL----------------P 244
Query: 420 LNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ + ++D D + +L F P R TA QCL HPWI
Sbjct: 245 QWRTI----------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHY-TEAALDEIKILKQIAEGD 99
RY + LG G F V D T A+KV + SA++ T L E+++LK++
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL---- 78
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
D ++KL + + S + ++ GE +IK + H I +
Sbjct: 79 --DHPNIMKLFEILEDS--SSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIKQVF 131
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMS 185
G+ ++H+ +I+H DLKPEN+LL S
Sbjct: 132 SGITYMHKH-NIVHRDLKPENILLES 156
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALD---------EIKILKQ 94
Y++ LG G V LA++ +T VA+K+ + +A + EI+ILK+
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKE 153
+ + C++K+ + F + + +V E + G L K + + K
Sbjct: 72 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKL 118
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ +L+ + +LH E IIH DLKPENVLL S
Sbjct: 119 YFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 149
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 65/167 (38%), Gaps = 47/167 (28%)
Query: 302 DLKCKLVDFG-NACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
D K++DFG + C+ D I T Y PEVL G+ Y D+WS I + L +G
Sbjct: 160 DCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSG 218
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWP 419
F Y ++E + +E G+Y+ D P
Sbjct: 219 TPPF-------YGKNEYDILKRVE-----------TGKYAFDL----------------P 244
Query: 420 LNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ + ++D D + +L F P R TA QCL HPWI
Sbjct: 245 QWRTI----------SDDAKDLIRKMLTFHPSLRITATQCLEHPWIQ 281
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 69/146 (47%), Gaps = 15/146 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHY-TEAALDEIKILKQIAEGD 99
RY + LG G F V D T A+KV + SA++ T L E+++LK++
Sbjct: 23 RYNIVCMLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKL---- 78
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
D ++KL + + S + ++ GE +IK + H I +
Sbjct: 79 --DHPNIMKLFEILEDS--SSFYIVGELYTGGELFDEIIKRKRFSE---HDAARIIKQVF 131
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMS 185
G+ ++H+ +I+H DLKPEN+LL S
Sbjct: 132 SGITYMHKH-NIVHRDLKPENILLES 156
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 171 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 230
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 231 FPGDSG------VDQLVEIIKVLGTPTRE 253
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 36 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 86
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 87 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 146
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 147 H-SFGICHRDIKPQNLLL 163
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALD---------EIKILKQ 94
Y++ LG G V LA++ +T VA+K+ + +A + EI+ILK+
Sbjct: 11 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 70
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKE 153
+ + C++K+ + F + + +V E + G L K + + K
Sbjct: 71 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKL 117
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ +L+ + +LH E IIH DLKPENVLL S
Sbjct: 118 YFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 148
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALD---------EIKILKQ 94
Y++ LG G V LA++ +T VA+K+ + +A + EI+ILK+
Sbjct: 18 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 77
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKE 153
+ + C++K+ + F + + +V E + G L K + + K
Sbjct: 78 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKL 124
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ +L+ + +LH E IIH DLKPENVLL S
Sbjct: 125 YFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 155
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 175 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 234
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 235 FPGDSG------VDQLVEIIKVLGTPTRE 257
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 40 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 90
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 91 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 150
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 151 H-SFGICHRDIKPQNLLL 167
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 182 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 241
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 242 FPGDSG------VDQLVEIIKVLGTPTRE 264
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 47 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 97
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 98 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 157
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 158 H-SFGICHRDIKPQNLLL 174
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/152 (28%), Positives = 72/152 (47%), Gaps = 24/152 (15%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALD---------EIKILKQ 94
Y++ LG G V LA++ +T VA+K+ + +A + EI+ILK+
Sbjct: 12 YIMSKTLGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKK 71
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKE 153
+ + C++K+ + F + + +V E + G L K + + K
Sbjct: 72 L------NHPCIIKIKNFF-----DAEDYYIVLELMEGGELFD--KVVGNKRLKEATCKL 118
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ +L+ + +LH E IIH DLKPENVLL S
Sbjct: 119 YFYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 149
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 201 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 260
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 261 FPGDSG------VDQLVEIIKVLGTPTRE 283
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 66 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 116
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 117 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 176
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 177 H-SFGICHRDIKPQNLLL 193
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 199 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 258
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 259 FPGDSG------VDQLVEIIKVLGTPTRE 281
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 64 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 114
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 115 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 174
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 175 H-SFGICHRDIKPQNLLL 191
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 45.8 bits (107), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 242 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 301
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 302 FPGDSG------VDQLVEIIKVLGTPTRE 324
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 107 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 157
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 158 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 217
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 218 H-SFGICHRDIKPQNLLL 234
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 167 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 226
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 227 FPGDSG------VDQLVEIIKVLGTPTRE 249
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 32 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 82
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 83 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 142
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 143 H-SFGICHRDIKPQNLLL 159
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 223 FPGDSG------VDQLVEIIKVLGTPTRE 245
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 78
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 139 H-SFGICHRDIKPQNLLL 155
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 197 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 256
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 257 FPGDSG------VDQLVEIIKVLGTPTRE 279
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 62 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 112
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 113 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 172
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 173 H-SFGICHRDIKPQNLLL 189
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 164 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 223
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 224 FPGDSG------VDQLVEIIKVLGTPTRE 246
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 29 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 79
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 80 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 139
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 140 H-SFGICHRDIKPQNLLL 156
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 223 FPGDSG------VDQLVEIIKVLGTPTRE 245
Score = 37.4 bits (85), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 65/138 (47%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 78
Query: 110 LDHFKHSGPNGQ--HVCMVFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG ++ +V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 79 RYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 139 H-SFGICHRDIKPQNLLL 155
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 223 FPGDSG------VDQLVEIIKVLGTPTRE 245
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 78
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 139 H-SFGICHRDIKPQNLLL 155
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 191 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 250
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 251 FPGDSG------VDQLVEIIKVLGTPTRE 273
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 56 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 106
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 107 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 166
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 167 H-SFGICHRDIKPQNLLL 183
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTN--DIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 163 KLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 223 FPGDSG------VDQLVEIIKVLGTPTRE 245
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 32/138 (23%), Positives = 63/138 (45%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---RELQIMRKL------DHCNIVRL 78
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ + + ++ + +P+ VK + + L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 139 H-SFGICHRDIKPQNLLL 155
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 168 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 227
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 228 FPGDSG------VDQLVEIIKVLGTPTRE 250
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 33 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 83
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 84 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 143
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 144 H-SFGICHRDIKPQNLLL 160
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 176 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 235
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 236 FPGDSG------VDQLVEIIKVLGTPTRE 258
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 41 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 91
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 92 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 151
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 152 H-SFGICHRDIKPQNLLL 168
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.4 bits (106), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 44/152 (28%), Positives = 70/152 (46%), Gaps = 22/152 (14%)
Query: 41 NGRYVVQSK--LGWGHFSTVWLAWDTQTSHYVALKVQKS-AQHYTEAALDEIKILKQIAE 97
N Y V LG G F V +T T +A K+ K+ E +EI ++ Q+
Sbjct: 86 NSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQL-- 143
Query: 98 GDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMV---KE 153
D +++L D F+ + + +V EY+ G L I Y L + K+
Sbjct: 144 ----DHANLIQLYDAFE----SKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFMKQ 195
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
IC G+ H+H ++ I+H DLKPEN+L ++
Sbjct: 196 IC----EGIRHMH-QMYILHLDLKPENILCVN 222
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/194 (21%), Positives = 74/194 (38%), Gaps = 58/194 (29%)
Query: 304 KCKLVDFGNACWTYK---QFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
+ K++DFG A YK + + T ++ PEV+ S P D+WS I + L +G
Sbjct: 227 QIKIIDFGLAR-RYKPREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSG- 284
Query: 361 VLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPL 420
P GDN D + L
Sbjct: 285 --LSPFLGDN---DAE------------------------------------------TL 297
Query: 421 NKVLIEKYDFSEKDANDMA----DFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSM 476
N +L ++D +++ D++ +F+ +L R +A++ L HPW++ L +
Sbjct: 298 NNILACRWDLEDEEFQDISEEAKEFISKLLIKEKSWRISASEALKHPWLS--DHKLHSRL 355
Query: 477 AATQPQDTGGSISD 490
+A + ++ G D
Sbjct: 356 SAQKKKNRGSDAQD 369
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 163 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 223 FPGDSG------VDQLVEIIKVLGTPTRE 245
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKN---RELQIMRKL------DHCNIVRL 78
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 139 H-SFGICHRDIKPQNLLL 155
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 163 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 223 FPGDSG------VDQLVEIIKVLGTPTRE 245
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---RELQIMRKL------DHCNIVRL 78
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 139 H-SFGICHRDIKPQNLLL 155
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 45.1 bits (105), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 46/89 (51%), Gaps = 9/89 (10%)
Query: 306 KLVDFGNACWTYKQFTND--IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVL 362
KL DFG+A + N I +R YR PE++ G+ Y++ D+WS C+ EL G +
Sbjct: 163 KLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQPI 222
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRK 391
F SG D L ++++LG R+
Sbjct: 223 FPGDSG------VDQLVEIIKVLGTPTRE 245
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 33/138 (23%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G F V+ A + VA+K + + E++I++++ D +V+L
Sbjct: 28 IGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKN---RELQIMRKL------DHCNIVRL 78
Query: 110 LDHFKHSGPNGQHVCM--VFEYLGENLLTLIKYADY--RGVPLHMVKEICFHILVGLDHL 165
F SG V + V +Y+ E + + ++ + +P+ VK + + L ++
Sbjct: 79 RYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQLFRSLAYI 138
Query: 166 HRELSIIHTDLKPENVLL 183
H I H D+KP+N+LL
Sbjct: 139 H-SFGICHRDIKPQNLLL 155
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 22/151 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALD---------EIKILKQ 94
Y++ LG G V LA++ +T VA+++ + +A + EI+ILK+
Sbjct: 137 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 196
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ + C++K+ + F + + +V E L E K + + K
Sbjct: 197 L------NHPCIIKIKNFF-----DAEDYYIVLE-LMEGGELFDKVVGNKRLKEATCKLY 244
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ +L+ + +LH E IIH DLKPENVLL S
Sbjct: 245 FYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 274
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 69/156 (44%), Gaps = 35/156 (22%)
Query: 321 TNDIQTRQYRCPEVLLGS-KYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLA 379
T + TR YR PEV+L S KYS D+WS CI EL +F RD H
Sbjct: 180 TEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-------GRDYRHQL 232
Query: 380 LMMELLGMMPRKIAFGGRYSRDFFNRHGDLR---------HIRRLRFWPLNKVLIEKYDF 430
L+ + G++ G +S + DLR +I+ L +P +EK F
Sbjct: 233 LL--IFGII------GTPHSDN------DLRCIESPRAREYIKSLPMYPAAP--LEKM-F 275
Query: 431 SEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ + D L +L F P KR TA + L HP++
Sbjct: 276 PRVNPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQ 310
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 43/163 (26%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
+ ++S LG G + V A T VA+K + + L ++ L++I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF----DKPLFALRTLREI-------- 60
Query: 104 KCVVKLLDHFKH-------------SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHM 150
K+L HFKH S N V ++ E + +L +R + M
Sbjct: 61 ----KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDL--------HRVISTQM 108
Query: 151 -----VKEICFHILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
++ + L + LH ++IH DLKP N+L+ S D
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCD 150
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYTEAALDEIKILKQIAEGD 99
N + + +LG G F V+ A + +T A KV + ++ E + EI+IL
Sbjct: 18 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC---- 73
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
D +VKLL + H G + ++ E+ + I RG+ ++ +C +L
Sbjct: 74 --DHPYIVKLLGAYYHDG----KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 127
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
L+ LH + IIH DLK NVL+
Sbjct: 128 EALNFLHSK-RIIHRDLKAGNVLM 150
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 53/178 (29%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEVLL-----GSKYSTPADLWS 348
+L ++ +L DFG + K I T + PEV++ + Y AD+WS
Sbjct: 148 VLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS 207
Query: 349 FACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGD 408
E+A + PH N R +++++ P + ++S +F
Sbjct: 208 LGITLIEMAQIE---PPHHELNPMR------VLLKIAKSDPPTLLTPSKWSVEF------ 252
Query: 409 LRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
DFL LD PE RP+AAQ L HP+++
Sbjct: 253 ------------------------------RDFLKIALDKNPETRPSAAQLLEHPFVS 280
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYTEAALDEIKILKQIAEGD 99
N + + +LG G F V+ A + +T A KV + ++ E + EI+IL
Sbjct: 10 NEVWEIVGELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATC---- 65
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
D +VKLL + H G + ++ E+ + I RG+ ++ +C +L
Sbjct: 66 --DHPYIVKLLGAYYHDG----KLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML 119
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
L+ LH + IIH DLK NVL+
Sbjct: 120 EALNFLHSK-RIIHRDLKAGNVLM 142
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 53/178 (29%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEVLL-----GSKYSTPADLWS 348
+L ++ +L DFG + K I T + PEV++ + Y AD+WS
Sbjct: 140 VLMTLEGDIRLADFGVSAKNLKTLQKRDSFIGTPYWMAPEVVMCETMKDTPYDYKADIWS 199
Query: 349 FACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGD 408
E+A + PH N R +++++ P + ++S +F
Sbjct: 200 LGITLIEMAQIE---PPHHELNPMR------VLLKIAKSDPPTLLTPSKWSVEF------ 244
Query: 409 LRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
DFL LD PE RP+AAQ L HP+++
Sbjct: 245 ------------------------------RDFLKIALDKNPETRPSAAQLLEHPFVS 272
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 71/151 (47%), Gaps = 22/151 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALD---------EIKILKQ 94
Y++ LG G V LA++ +T VA+++ + +A + EI+ILK+
Sbjct: 151 YIMSKTLGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKK 210
Query: 95 IAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ + C++K+ + F + + +V E L E K + + K
Sbjct: 211 L------NHPCIIKIKNFF-----DAEDYYIVLE-LMEGGELFDKVVGNKRLKEATCKLY 258
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+ +L+ + +LH E IIH DLKPENVLL S
Sbjct: 259 FYQMLLAVQYLH-ENGIIHRDLKPENVLLSS 288
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 76/175 (43%), Gaps = 38/175 (21%)
Query: 36 GDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAAL--------- 86
GD + +Y ++ ++G G + V LA++ + Y A+KV + +A
Sbjct: 7 GDCVQLNQYTLKDEIGKGSYGVVKLAYNENDNTYYAMKVLSKKKLIRQAGFPRRPPPRGT 66
Query: 87 ------------------DEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFE 128
EI ILK++ D VVKL++ PN H+ MVFE
Sbjct: 67 RPAPGGCIQPRGPIEQVYQEIAILKKL------DHPNVVKLVEVL--DDPNEDHLYMVFE 118
Query: 129 YLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ + +++ + + + ++ G+++LH + IIH D+KP N+L+
Sbjct: 119 LVNQG--PVMEVPTLKPLSEDQARFYFQDLIKGIEYLHYQ-KIIHRDIKPSNLLV 170
Score = 28.5 bits (62), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 435 ANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
A D+ D + +LD PE R + HPW+
Sbjct: 266 AEDLKDLITRMLDKNPESRIVVPEIKLHPWVT 297
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 69/156 (44%), Gaps = 35/156 (22%)
Query: 321 TNDIQTRQYRCPEVLLGS-KYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLA 379
T + TR YR PEV+L S KYS D+WS CI EL +F RD H
Sbjct: 180 TEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-------GRDYRHQL 232
Query: 380 LMMELLGMMPRKIAFGGRYSRDFFNRHGDLR---------HIRRLRFWPLNKVLIEKYDF 430
L+ + G++ G +S + DLR +I+ L +P +EK F
Sbjct: 233 LL--IFGII------GTPHSDN------DLRCIESPRAREYIKSLPMYPAAP--LEKM-F 275
Query: 431 SEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ + D L +L F P KR TA + L HP++
Sbjct: 276 PRVNPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQ 310
Score = 29.3 bits (64), Expect = 5.9, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 43/163 (26%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
+ ++S LG G + V A T VA+K + + L ++ L++I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF----DKPLFALRTLREI-------- 60
Query: 104 KCVVKLLDHFKH-------------SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHM 150
K+L HFKH S N V ++ E + +L +R + M
Sbjct: 61 ----KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDL--------HRVISTQM 108
Query: 151 -----VKEICFHILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
++ + L + LH ++IH DLKP N+L+ S D
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCD 150
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEG 98
+Y +K+G G F V+ A +T VALK ++ + + AL EIKIL+ +
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 99 DPDDKKCVVKLLDHFK-HSGPNGQ---HVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ VV L++ + + P + + +VF++ +L L+ + L +K +
Sbjct: 78 N------VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRV 130
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLL 183
+L GL ++HR I+H D+K NVL+
Sbjct: 131 MQMLLNGLYYIHRN-KILHRDMKAANVLI 158
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 297 LLAAVDLKCKLVDFGNA-CWTY------KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWS 348
+L D KL DFG A ++ ++ N + T YR PE+LLG + Y P DLW
Sbjct: 156 VLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWG 215
Query: 349 FACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLG 386
CI E+ T + ++ ++ LAL+ +L G
Sbjct: 216 AGCIMAEMWTRSPIMQGNT------EQHQLALISQLCG 247
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 33 VRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKI 91
V +GD K +Y K+G G TV+ A D T VA++ + Q E ++EI +
Sbjct: 13 VSVGDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 92 LKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+++ +P+ +V LD + G + +V EYL LT + + +
Sbjct: 71 MRE--NKNPN----IVNYLDSYLV----GDELWVVMEYLAGGSLTDV--VTETCMDEGQI 118
Query: 152 KEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+C L L+ LH +IH D+K +N+LL
Sbjct: 119 AAVCRECLQALEFLHSN-QVIHRDIKSDNILL 149
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTY---KQFTNDIQTRQYRCPEV 334
SN+ I++D K + +L +D KL DFG + + + T + PEV
Sbjct: 134 SNQVIHRDIKSDN------ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 187
Query: 335 LLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAF 394
+ Y D+WS + E+ G+ P+ +N R +A P K++
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNENPLRALYLIATNGTPELQNPEKLS- 243
Query: 395 GGRYSRDFFNRHGDL 409
RDF NR D+
Sbjct: 244 --AIFRDFLNRCLDM 256
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 33 VRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKI 91
V +GD K +Y K+G G TV+ A D T VA++ + Q E ++EI +
Sbjct: 13 VSVGDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 92 LKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+++ +P+ +V LD + G + +V EYL LT + + +
Sbjct: 71 MRE--NKNPN----IVNYLDSYLV----GDELWVVMEYLAGGSLTDV--VTETCMDEGQI 118
Query: 152 KEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+C L L+ LH +IH D+K +N+LL
Sbjct: 119 AAVCRECLQALEFLHSN-QVIHRDIKSDNILL 149
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 55/135 (40%), Gaps = 15/135 (11%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEV 334
SN+ I++D K + +L +D KL DFG + + + T + PEV
Sbjct: 134 SNQVIHRDIKSDN------ILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEV 187
Query: 335 LLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAF 394
+ Y D+WS + E+ G+ P+ +N R +A P K++
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNENPLRALYLIATNGTPELQNPEKLS- 243
Query: 395 GGRYSRDFFNRHGDL 409
RDF NR D+
Sbjct: 244 --AIFRDFLNRCLDM 256
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 33 VRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKI 91
V +GD K +Y K+G G TV+ A D T VA++ + Q E ++EI +
Sbjct: 13 VSVGDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 70
Query: 92 LKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+++ +P+ +V LD + G + +V EYL LT + + +
Sbjct: 71 MRE--NKNPN----IVNYLDSYLV----GDELWVVMEYLAGGSLTDV--VTETCMDEGQI 118
Query: 152 KEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+C L L+ LH +IH D+K +N+LL
Sbjct: 119 AAVCRECLQALEFLHSN-QVIHRDIKSDNILL 149
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEV 334
SN+ I++D K + +L +D KL DFG + + + T + PEV
Sbjct: 134 SNQVIHRDIKSDN------ILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 187
Query: 335 LLGSKYSTPADLWSFACICFELATGD 360
+ Y D+WS + E+ G+
Sbjct: 188 VTRKAYGPKVDIWSLGIMAIEMIEGE 213
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 70/144 (48%), Gaps = 14/144 (9%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALD-EIKILKQIAEGDPDDKKCVV 107
LG G FS V LA + T A+K + K A E++++ EI +L++I + +V
Sbjct: 30 LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHEN------IV 83
Query: 108 KLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHR 167
L D ++ PN ++ M GE +++ Y + +L + +LHR
Sbjct: 84 ALEDIYE--SPNHLYLVMQLVSGGELFDRIVEKGFYTEKD---ASTLIRQVLDAVYYLHR 138
Query: 168 ELSIIHTDLKPENVLLMSMIDPSK 191
+ I+H DLKPEN+L S + SK
Sbjct: 139 -MGIVHRDLKPENLLYYSQDEESK 161
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 47/144 (32%), Gaps = 52/144 (36%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T Y PEVL YS D WS I + L G F YD ++ L
Sbjct: 185 TPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF-------YDENDSKL------- 230
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMAD----F 441
++L +Y+F +D++D F
Sbjct: 231 ----------------------------------FEQILKAEYEFDSPYWDDISDSAKDF 256
Query: 442 LVPILDFVPEKRPTAAQCLTHPWI 465
+ +++ P KR T Q HPWI
Sbjct: 257 IRNLMEKDPNKRYTCEQAARHPWI 280
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 304 KCKLVDFGNACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
+ KL DFG + N + TR Y PE L G+ YS +D+WS ELA G
Sbjct: 153 EIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQGTHYSVQSDIWSMGLSLVELAVG 209
Score = 32.3 bits (72), Expect = 0.66, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 39/64 (60%), Gaps = 5/64 (7%)
Query: 123 VCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENV 181
+CM E++ G +L ++K A + +P ++ ++ +L GL +L + I+H D+KP N+
Sbjct: 91 ICM--EHMDGGSLDQVLKEA--KRIPEEILGKVSIAVLRGLAYLREKHQIMHRDVKPSNI 146
Query: 182 LLMS 185
L+ S
Sbjct: 147 LVNS 150
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 70/152 (46%), Gaps = 16/152 (10%)
Query: 33 VRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKI 91
V +GD K +Y K+G G TV+ A D T VA++ + Q E ++EI +
Sbjct: 14 VSVGDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 71
Query: 92 LKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+++ +P+ +V LD + G + +V EYL LT + + +
Sbjct: 72 MRE--NKNPN----IVNYLDSYLV----GDELWVVMEYLAGGSLTDV--VTETCMDEGQI 119
Query: 152 KEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+C L L+ LH +IH D+K +N+LL
Sbjct: 120 AAVCRECLQALEFLHSN-QVIHRDIKSDNILL 150
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/86 (25%), Positives = 37/86 (43%), Gaps = 9/86 (10%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEV 334
SN+ I++D K + +L +D KL DFG + + + T + PEV
Sbjct: 135 SNQVIHRDIKSDN------ILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEV 188
Query: 335 LLGSKYSTPADLWSFACICFELATGD 360
+ Y D+WS + E+ G+
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGE 214
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 48/153 (31%), Positives = 68/153 (44%), Gaps = 35/153 (22%)
Query: 324 IQTRQYRCPEVLLGS-KYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMM 382
+ TR YR PEV+L S KYS D+WS CI EL +F RD H L+
Sbjct: 183 VATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFLRRPIFP-------GRDYRHQLLL- 234
Query: 383 ELLGMMPRKIAFGGRYSRDFFNRHGDLR---------HIRRLRFWPLNKVLIEKYDFSEK 433
+ G++ G +S + DLR +I+ L +P +EK F
Sbjct: 235 -IFGII------GTPHSDN------DLRCIESPRAREYIKSLPMYPAAP--LEKM-FPRV 278
Query: 434 DANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ + D L +L F P KR TA + L HP++
Sbjct: 279 NPKGI-DLLQRMLVFDPAKRITAKEALEHPYLQ 310
Score = 28.9 bits (63), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 39/163 (23%), Positives = 65/163 (39%), Gaps = 43/163 (26%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
+ ++S LG G + V A T VA+K + + L ++ L++I
Sbjct: 13 FQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPF----DKPLFALRTLREI-------- 60
Query: 104 KCVVKLLDHFKH-------------SGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHM 150
K+L HFKH S N V ++ E + +L +R + M
Sbjct: 61 ----KILKHFKHENIITIFNIQRPDSFENFNEVYIIQELMQTDL--------HRVISTQM 108
Query: 151 -----VKEICFHILVGLDHLHRELSIIHTDLKPENVLLMSMID 188
++ + L + LH ++IH DLKP N+L+ S D
Sbjct: 109 LSDDHIQYFIYQTLRAVKVLHGS-NVIHRDLKPSNLLINSNCD 150
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 30/57 (52%), Gaps = 1/57 (1%)
Query: 304 KCKLVDFGNACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
+ KL DFG + + N+ + TR Y PE L G+ YS +D+WS E+A G
Sbjct: 146 EIKLCDFGVSGQLIDEMANEFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 202
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+P ++ ++ ++ GL +L + I+H D+KP N+L+ S
Sbjct: 104 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 143
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 73/148 (49%), Gaps = 15/148 (10%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEGD 99
+Y +K+G G F V+ A +T VALK ++ + + AL EIKIL+ + +
Sbjct: 19 KYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHEN 78
Query: 100 PDDKKCVVKLLDHFK-HSGPNGQ---HVCMVFEYLGENLLTLIKYADYRGVPLHMVKEIC 155
VV L++ + + P + + +VF++ +L L+ + L +K +
Sbjct: 79 ------VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRVM 131
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLL 183
+L GL ++HR I+H D+K NVL+
Sbjct: 132 QMLLNGLYYIHRN-KILHRDMKAANVLI 158
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 306 KLVDFGNA-CWTYKQ------FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELA 357
KL DFG A ++ + + N + T YR PE+LLG + Y P DLW CI E+
Sbjct: 165 KLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
Query: 358 TGDVLFDPHSGDNYDRDEDHLALMMELLG 386
T + ++ ++ LAL+ +L G
Sbjct: 225 TRSPIMQGNT------EQHQLALISQLCG 247
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 43.1 bits (100), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEG 98
+Y +K+G G F V+ A +T VALK ++ + + AL EIKIL+ +
Sbjct: 18 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 77
Query: 99 DPDDKKCVVKLLDHFK-HSGPNGQ---HVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ VV L++ + + P + + +VF++ +L L+ + L +K +
Sbjct: 78 N------VVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRV 130
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLL 183
+L GL ++HR I+H D+K NVL+
Sbjct: 131 MQMLLNGLYYIHRN-KILHRDMKAANVLI 158
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 306 KLVDFGNA-CWTYKQ------FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELA 357
KL DFG A ++ + + N + T YR PE+LLG + Y P DLW CI E+
Sbjct: 165 KLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 224
Query: 358 TGDVLFDPHSGDNYDRDEDHLALMMELLG 386
T + ++ ++ LAL+ +L G
Sbjct: 225 TRSPIMQGNT------EQHQLALISQLCG 247
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 68/146 (46%), Gaps = 12/146 (8%)
Query: 40 KNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEI-KILKQIAEG 98
K G Y++ LG G F V + T H VA+K+ + +LD + KI ++I
Sbjct: 14 KIGHYILGDTLGVGTFGKVKVGKHELTGHKVAVKILNRQK---IRSLDVVGKIRREIQNL 70
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRG-VPLHMVKEICFH 157
++KL S P+ + MV EY+ L Y G + + +
Sbjct: 71 KLFRHPHIIKLYQVI--STPSD--IFMVMEYVSGG--ELFDYICKNGRLDEKESRRLFQQ 124
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLL 183
IL G+D+ HR + ++H DLKPENVLL
Sbjct: 125 ILSGVDYCHRHM-VVHRDLKPENVLL 149
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 37/155 (23%), Positives = 62/155 (40%), Gaps = 24/155 (15%)
Query: 295 KELLAAVDLKCKLVDFG--NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTP-ADLWSFAC 351
+ +L + K+ DFG N + + Y PEV+ G Y+ P D+WS
Sbjct: 145 ENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPNYAAPEVISGRLYAGPEVDIWSSGV 204
Query: 352 ICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRH--GDL 409
I + L G + F D+DH+ + +KI G Y+ + N L
Sbjct: 205 ILYALLCGTLPF----------DDDHVPTLF-------KKICDGIFYTPQYLNPSVISLL 247
Query: 410 RHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVP 444
+H+ L+ P+ + I+ E D+ +L P
Sbjct: 248 KHM--LQVDPMKRATIKDIREHEWFKQDLPKYLFP 280
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 73/149 (48%), Gaps = 15/149 (10%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK---VQKSAQHYTEAALDEIKILKQIAEG 98
+Y +K+G G F V+ A +T VALK ++ + + AL EIKIL+ +
Sbjct: 17 SKYEKLAKIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHE 76
Query: 99 DPDDKKCVVKLLDHFK-HSGPNGQ---HVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI 154
+ VV L++ + + P + + +VF++ +L L+ + L +K +
Sbjct: 77 N------VVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVK-FTLSEIKRV 129
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLL 183
+L GL ++HR I+H D+K NVL+
Sbjct: 130 MQMLLNGLYYIHRN-KILHRDMKAANVLI 157
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/89 (32%), Positives = 44/89 (49%), Gaps = 14/89 (15%)
Query: 306 KLVDFGNA-CWTYKQ------FTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELA 357
KL DFG A ++ + + N + T YR PE+LLG + Y P DLW CI E+
Sbjct: 164 KLADFGLARAFSLAKNSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMW 223
Query: 358 TGDVLFDPHSGDNYDRDEDHLALMMELLG 386
T + ++ ++ LAL+ +L G
Sbjct: 224 TRSPIMQGNT------EQHQLALISQLCG 246
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 70/147 (47%), Gaps = 22/147 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI-LKQIAEGDPDD 102
+ + LG G F V L Y A+KV K EI + LKQ+ + D
Sbjct: 8 FQILRTLGTGSFGRVHLIRSRHNGRYYAMKVLKK----------EIVVRLKQVEHTN--D 55
Query: 103 KKCVVKLLDH-----FKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICF 156
++ ++ ++ H + + Q + M+ +Y+ G L +L++ + + P + K
Sbjct: 56 ERLMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKS--QRFPNPVAKFYAA 113
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
+ + L++LH + II+ DLKPEN+LL
Sbjct: 114 EVCLALEYLHSK-DIIYRDLKPENILL 139
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDV-LF 363
K+ DFG A + T Y PEV+ Y+ D WSF + +E+ G +
Sbjct: 145 IKITDFGFAKYVPDVTYXLCGTPDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPFY 204
Query: 364 DPHSGDNYDR 373
D ++ Y++
Sbjct: 205 DSNTMKTYEK 214
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 65/139 (46%), Gaps = 19/139 (13%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDDKKCV 106
++G G F V+ D +T VA+K+ + A+ E EI +L Q C
Sbjct: 30 RIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQ----------CD 79
Query: 107 VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLH-MVKEICFHILVGLDH 164
+ + S G + ++ EYL G + L L++ + + M+KE IL GLD+
Sbjct: 80 SSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKE----ILKGLDY 135
Query: 165 LHRELSIIHTDLKPENVLL 183
LH E IH D+K NVLL
Sbjct: 136 LHSEKK-IHRDIKAANVLL 153
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 305 CKLVDFGNACW---TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
KL DFG A T + + T + PEV+ S Y + AD+WS ELA G+
Sbjct: 159 VKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIQQSAYDSKADIWSLGITAIELAKGE 217
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 42.4 bits (98), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 123 VCMVFEYLGENLLTLIKYADYRG--VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPEN 180
+CM E + +L K +G +P ++ +I I+ L+HLH +LS+IH D+KP N
Sbjct: 127 ICM--ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 184
Query: 181 VLLMSM 186
VL+ ++
Sbjct: 185 VLINAL 190
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 74/151 (49%), Gaps = 17/151 (11%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALD-EIKILKQIAEGDPDD 102
++ LG G FS V+L T ALK K + + +++L+ EI +LK+I +
Sbjct: 11 FIFMEVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHEN--- 67
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICFHILV 160
+V L D ++ + H +V + + GE +++ Y +V + +L
Sbjct: 68 ---IVTLEDIYEST----THYYLVMQLVSGGELFDRILERGVYTEKDASLVIQ---QVLS 117
Query: 161 GLDHLHRELSIIHTDLKPENVLLMSMIDPSK 191
+ +LH E I+H DLKPEN+L ++ + SK
Sbjct: 118 AVKYLH-ENGIVHRDLKPENLLYLTPEENSK 147
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 35/141 (24%), Positives = 48/141 (34%), Gaps = 44/141 (31%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T Y PEVL YS D WS I + L G + P Y+ E L
Sbjct: 170 TPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCG---YPPF----YEETESKL------- 215
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPI 445
F + + + FW D SE DF+ +
Sbjct: 216 -----------------FEKIKEGYYEFESPFWD---------DISE----SAKDFICHL 245
Query: 446 LDFVPEKRPTAAQCLTHPWIN 466
L+ P +R T + L+HPWI+
Sbjct: 246 LEKDPNERYTCEKALSHPWID 266
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 30/43 (69%)
Query: 144 RGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMSM 186
+ +P ++ +I I+ L+HLH +LS+IH D+KP NVL+ ++
Sbjct: 131 QTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSNVLINAL 173
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 42.0 bits (97), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 304 KCKLVDFGNACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
+ KL DFG + N + TR Y PE L G+ YS +D+WS E+A G
Sbjct: 205 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 261
Score = 32.3 bits (72), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 38/64 (59%), Gaps = 5/64 (7%)
Query: 123 VCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENV 181
+CM E++ G +L ++K A +P ++ ++ ++ GL +L + I+H D+KP N+
Sbjct: 143 ICM--EHMDGGSLDQVLKKAGR--IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNI 198
Query: 182 LLMS 185
L+ S
Sbjct: 199 LVNS 202
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 46 VQSKLGWGHFSTVWLAWDTQTSHY-VALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKK 104
++ KLG G F VW+A T H VA+K K EA L E ++K + DK
Sbjct: 192 LEKKLGAGQFGEVWMA--TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH----DK- 244
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGE-NLLTLIKYADYRGVPLHMVKEICFHILVGLD 163
+VKL H+ + + ++ E++ + +LL +K + PL + + I G+
Sbjct: 245 -LVKL-----HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 298
Query: 164 HLHRELSIIHTDLKPENVLL 183
+ + + IH DL+ N+L+
Sbjct: 299 FIEQR-NYIHRDLRAANILV 317
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 311 RAANILVSASLVCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGSFTIKSD 367
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 368 VWSFGILLMEIVT 380
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 304 KCKLVDFGNACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
+ KL DFG + N + TR Y PE L G+ YS +D+WS E+A G
Sbjct: 170 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 226
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+P ++ ++ ++ GL +L + I+H D+KP N+L+ S
Sbjct: 128 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 167
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 304 KCKLVDFGNACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
+ KL DFG + N + TR Y PE L G+ YS +D+WS E+A G
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+P ++ ++ ++ GL +L + I+H D+KP N+L+ S
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 46 VQSKLGWGHFSTVWLAWDTQTSHY-VALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKK 104
++ KLG G F VW+A T H VA+K K EA L E ++K + DK
Sbjct: 186 LEKKLGAGQFGEVWMA--TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH----DK- 238
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGE-NLLTLIKYADYRGVPLHMVKEICFHILVGLD 163
+VKL H+ + + ++ E++ + +LL +K + PL + + I G+
Sbjct: 239 -LVKL-----HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 292
Query: 164 HLHRELSIIHTDLKPENVLL 183
+ + + IH DL+ N+L+
Sbjct: 293 FIEQR-NYIHRDLRAANILV 311
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 30/66 (45%), Gaps = 6/66 (9%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
R +L + L CK+ DFG A K ++ PE + ++ +D+WSF +
Sbjct: 305 RAANILVSASLVCKIADFGLARVGAKF------PIKWTAPEAINFGSFTIKSDVWSFGIL 358
Query: 353 CFELAT 358
E+ T
Sbjct: 359 LMEIVT 364
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 42.0 bits (97), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 73/149 (48%), Gaps = 14/149 (9%)
Query: 41 NGRYV-VQSKLGWGHFSTVWLAWDTQTSHYVA---LKVQKSAQHYTEAALDEIKILKQIA 96
+GR++ ++G G F TV+ DT+T+ VA L+ +K + + +E + LK +
Sbjct: 24 DGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQ 83
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLL-TLIKYADYRGVPLHMVKEIC 155
+ +V+ D ++ + + + +V E L T +K ++ + +++ C
Sbjct: 84 HPN------IVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLK--RFKVXKIKVLRSWC 135
Query: 156 FHILVGLDHLH-RELSIIHTDLKPENVLL 183
IL GL LH R IIH DLK +N+ +
Sbjct: 136 RQILKGLQFLHTRTPPIIHRDLKCDNIFI 164
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 30/66 (45%), Gaps = 1/66 (1%)
Query: 304 KCKLVDFGNACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
+ KL DFG + N + TR Y PE L G+ YS +D+WS E+A G
Sbjct: 162 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
Query: 363 FDPHSG 368
SG
Sbjct: 222 IGSGSG 227
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+P ++ ++ ++ GL +L + I+H D+KP N+L+ S
Sbjct: 120 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 159
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 69/142 (48%), Gaps = 19/142 (13%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEA---ALDEIKILKQIAEGDPDDKKC 105
KLG G + V L D T A+K+ + T + L+E+ +LK + D
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLL------DHPN 97
Query: 106 VVKLLDHFKHSGPNGQHVCMVFE-YLGENLL-TLIKYADYRGVPLHMVKEICFHILVGLD 163
++KL D F+ + ++ +V E Y G L +I + V + I +L G+
Sbjct: 98 IMKLYDFFE----DKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAV---IIKQVLSGVT 150
Query: 164 HLHRELSIIHTDLKPENVLLMS 185
+LH+ +I+H DLKPEN+LL S
Sbjct: 151 YLHKH-NIVHRDLKPENLLLES 171
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/170 (25%), Positives = 63/170 (37%), Gaps = 55/170 (32%)
Query: 302 DLKCKLVDFG-NACW-TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
D K+VDFG +A + K+ + T Y PEVL KY D+WS I F L G
Sbjct: 175 DALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL-RKKYDEKCDVWSIGVILFILLAG 233
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWP 419
+ P FGG+ ++
Sbjct: 234 ---YPP----------------------------FGGQTDQEI----------------- 245
Query: 420 LNKVLIEKYDFSEKDANDMA----DFLVPILDFVPEKRPTAAQCLTHPWI 465
L KV KY F + +++ D + +L F ++R +A Q L HPWI
Sbjct: 246 LRKVEKGKYTFDSPEWKNVSEGAKDLIKQMLQFDSQRRISAQQALEHPWI 295
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 42.0 bits (97), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 48/222 (21%), Positives = 90/222 (40%), Gaps = 31/222 (13%)
Query: 324 IQTRQYRCPEVLLGSKYSTPA-DLWSFACICFELATGDVLF----------DPHSGDNYD 372
+ T YR PE+LLG+++ T A D+W+ CI EL T + +F +P+ D D
Sbjct: 196 VVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSEPIFHCRQEDIKTSNPYHHDQLD 255
Query: 373 RDEDHLALMM----ELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKY 428
R + + E + MP + R+ + ++++ + + P +K
Sbjct: 256 RIFNVMGFPADKDWEDIKKMPEHSTLMKDFRRNTYTNCSLIKYMEKHKVKPDSKAF---- 311
Query: 429 DFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQ-PQDTGGS 487
L +L P KR T+ Q + P+ P A Q P
Sbjct: 312 -----------HLLQKLLTMDPIKRITSEQAMQDPYFLEDPLPTSDVFAGCQIPYPKREF 360
Query: 488 ISDKNRREKDEREAMEVRVGNIAIDGVSKPSRDNAAATLRPP 529
++++ +K +++ + + GN +G P +++ T PP
Sbjct: 361 LTEEEPDDKGDKKNQQQQQGNNHTNGTGHPGNQDSSHTQGPP 402
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 8/69 (11%)
Query: 123 VCMVFEYLGENLLTLIKY-----ADYRGV--PLHMVKEICFHILVGLDHLHRELSIIHTD 175
V ++F+Y +L +IK+ A+ + V P MVK + + IL G+ +LH ++H D
Sbjct: 95 VWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQILDGIHYLHANW-VLHRD 153
Query: 176 LKPENVLLM 184
LKP N+L+M
Sbjct: 154 LKPANILVM 162
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
K +D G C T + T QY PE+L KY+ D WSF + FE TG F P
Sbjct: 173 KELDQGELC------TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 226
Query: 366 H------SGDNYDRDEDHLALMMELLG 386
+ G ++ +H+ + +L G
Sbjct: 227 NWQPVQWHGKVREKSNEHIVVYDDLTG 253
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQ-TSHYVALKV--QKSAQHYTEAALDEIKILKQIAEG 98
G + ++ +LG G F V L W Q T VA+K Q+ + E EI+I+K++
Sbjct: 15 GPWEMKERLGTGGFGYV-LRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 73
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ + ++ D + PN + + EY G+ L ++ + G+ ++ +
Sbjct: 74 NVVSAR---EVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 129
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I L +LH E IIH DLKPEN++L
Sbjct: 130 DISSALRYLH-ENRIIHRDLKPENIVL 155
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 304 KCKLVDFGNACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
+ KL DFG + N + TR Y PE L G+ YS +D+WS E+A G
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+P ++ ++ ++ GL +L + I+H D+KP N+L+ S
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 39/87 (44%), Gaps = 12/87 (13%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDP 365
K +D G C T + T QY PE+L KY+ D WSF + FE TG F P
Sbjct: 172 KELDQGELC------TEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPFLP 225
Query: 366 H------SGDNYDRDEDHLALMMELLG 386
+ G ++ +H+ + +L G
Sbjct: 226 NWQPVQWHGKVREKSNEHIVVYDDLTG 252
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 42/147 (28%), Positives = 71/147 (48%), Gaps = 11/147 (7%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQ-TSHYVALKV--QKSAQHYTEAALDEIKILKQIAEG 98
G + ++ +LG G F V L W Q T VA+K Q+ + E EI+I+K++
Sbjct: 14 GPWEMKERLGTGGFGYV-LRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHP 72
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ + ++ D + PN + + EY G+ L ++ + G+ ++ +
Sbjct: 73 NVVSAR---EVPDGLQKLAPNDLPL-LAMEYCEGGDLRKYLNQFENCCGLKEGPIRTLLS 128
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I L +LH E IIH DLKPEN++L
Sbjct: 129 DISSALRYLH-ENRIIHRDLKPENIVL 154
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 10/145 (6%)
Query: 40 KNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGD 99
K G YV+ LG G F V + T H VA+K+ + + + +IK ++I
Sbjct: 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLK 66
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH-I 158
++KL S P MV EY+ L Y G M F I
Sbjct: 67 LFRHPHIIKLYQVI--STPTD--FFMVMEYVSGG--ELFDYICKHGRVEEMEARRLFQQI 120
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
L +D+ HR + ++H DLKPENVLL
Sbjct: 121 LSAVDYCHRHM-VVHRDLKPENVLL 144
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 295 KELLAAVDLKCKLVDFG-NACWTYKQFTND-IQTRQYRCPEVLLGSKYSTP-ADLWSFAC 351
+ +L + K+ DFG + + +F D + Y PEV+ G Y+ P D+WS
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 352 ICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRH 411
I + L G + F D++H+ + +KI G Y ++ NR
Sbjct: 200 ILYALLCGTLPF----------DDEHVPTLF-------KKIRGGVFYIPEYLNRSVATLL 242
Query: 412 IRRLRFWPLNKVLIEKYDFSEKDANDMADFLVP 444
+ L+ PL + I+ E D+ +L P
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQDLPSYLFP 275
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 304 KCKLVDFGNACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
+ KL DFG + N + TR Y PE L G+ YS +D+WS E+A G
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+P ++ ++ ++ GL +L + I+H D+KP N+L+ S
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 304 KCKLVDFGNACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
+ KL DFG + N + TR Y PE L G+ YS +D+WS E+A G
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+P ++ ++ ++ GL +L + I+H D+KP N+L+ S
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/57 (36%), Positives = 28/57 (49%), Gaps = 1/57 (1%)
Query: 304 KCKLVDFGNACWTYKQFTND-IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
+ KL DFG + N + TR Y PE L G+ YS +D+WS E+A G
Sbjct: 143 EIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVG 199
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 25/40 (62%)
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
+P ++ ++ ++ GL +L + I+H D+KP N+L+ S
Sbjct: 101 IPEQILGKVSIAVIKGLTYLREKHKIMHRDVKPSNILVNS 140
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/140 (27%), Positives = 67/140 (47%), Gaps = 16/140 (11%)
Query: 46 VQSKLGWGHFSTVWLAWDTQTSHY-VALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKK 104
++ KLG G F VW+A T H VA+K K EA L E ++K + DK
Sbjct: 19 LEKKLGAGQFGEVWMA--TYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQH----DK- 71
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGE-NLLTLIKYADYRGVPLHMVKEICFHILVGLD 163
+VKL H+ + + ++ E++ + +LL +K + PL + + I G+
Sbjct: 72 -LVKL-----HAVVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPLPKLIDFSAQIAEGMA 125
Query: 164 HLHRELSIIHTDLKPENVLL 183
+ + + IH DL+ N+L+
Sbjct: 126 FIEQR-NYIHRDLRAANILV 144
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 138 RAANILVSASLVCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGSFTIKSD 194
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 195 VWSFGILLMEIVT 207
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/145 (31%), Positives = 63/145 (43%), Gaps = 10/145 (6%)
Query: 40 KNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGD 99
K G YV+ LG G F V + T H VA+K+ + + + +IK ++I
Sbjct: 9 KIGHYVLGDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLK 66
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFH-I 158
++KL S P MV EY+ L Y G M F I
Sbjct: 67 LFRHPHIIKLYQVI--STPTD--FFMVMEYVSGG--ELFDYICKHGRVEEMEARRLFQQI 120
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
L +D+ HR + ++H DLKPENVLL
Sbjct: 121 LSAVDYCHRHM-VVHRDLKPENVLL 144
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 20/153 (13%)
Query: 295 KELLAAVDLKCKLVDFG--NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTP-ADLWSFAC 351
+ +L + K+ DFG N + + Y PEV+ G Y+ P D+WS
Sbjct: 140 ENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPNYAAPEVISGRLYAGPEVDIWSCGV 199
Query: 352 ICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRH 411
I + L G + F D++H+ + +KI G Y ++ NR
Sbjct: 200 ILYALLCGTLPF----------DDEHVPTLF-------KKIRGGVFYIPEYLNRSVATLL 242
Query: 412 IRRLRFWPLNKVLIEKYDFSEKDANDMADFLVP 444
+ L+ PL + I+ E D+ +L P
Sbjct: 243 MHMLQVDPLKRATIKDIREHEWFKQDLPSYLFP 275
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/172 (22%), Positives = 80/172 (46%), Gaps = 30/172 (17%)
Query: 33 VRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKS----AQHYTEAALDE 88
V+ D + N ++++ L G F+ + L + Y K +KS + +T++ D+
Sbjct: 23 VKEKDKYINDYRIIRT-LNQGKFNKIILC-EKDNKFYALKKYEKSLLEKKRDFTKSNNDK 80
Query: 89 IKILKQIAEGDPDDKKCVVKLLDHFKHSG--------PNGQHVCMVFEYLGENLLTLIKY 140
I I + DD K ++++ K+ N V +++EY+ + +++K+
Sbjct: 81 ISI-----KSKYDDFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMEND--SILKF 133
Query: 141 ADYRGV---------PLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+Y V P+ ++K I +L ++H E +I H D+KP N+L+
Sbjct: 134 DEYFFVLDKNYTCFIPIQVIKCIIKSVLNSFSYIHNEKNICHRDVKPSNILM 185
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 16/152 (10%)
Query: 33 VRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKI 91
V +GD K +Y K+G G TV+ A D T VA++ + Q E ++EI +
Sbjct: 14 VSVGDPKK--KYTRFEKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILV 71
Query: 92 LKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMV 151
+++ +P+ +V LD + G + +V EYL LT + +
Sbjct: 72 MRE--NKNPN----IVNYLDSYLV----GDELWVVMEYLAGGSLT--DVVTETCMDEGQI 119
Query: 152 KEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+C L L+ LH +IH ++K +N+LL
Sbjct: 120 AAVCRECLQALEFLHSN-QVIHRNIKSDNILL 150
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 32/131 (24%), Positives = 53/131 (40%), Gaps = 15/131 (11%)
Query: 278 SNEGINKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTY---KQFTNDIQTRQYRCPEV 334
SN+ I+++ K + +L +D KL DFG + + + T + PEV
Sbjct: 135 SNQVIHRNIKSDN------ILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEV 188
Query: 335 LLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAF 394
+ Y D+WS + E+ G+ P+ +N R +A P K++
Sbjct: 189 VTRKAYGPKVDIWSLGIMAIEMIEGE---PPYLNENPLRALYLIATNGTPELQNPEKLS- 244
Query: 395 GGRYSRDFFNR 405
RDF NR
Sbjct: 245 --AIFRDFLNR 253
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 7/88 (7%)
Query: 295 KELLAAVDLKCKLVDFGNACWT----YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
+ +L + D LVDFG A T Q N + T Y PE S + AD+++
Sbjct: 163 ENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALT 222
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHL 378
C+ +E TG P+ GD H+
Sbjct: 223 CVLYECLTGS---PPYQGDQLSVXGAHI 247
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 70/149 (46%), Gaps = 16/149 (10%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
Y + +G G FS V + +T A+K+ A+ + L + ++ +
Sbjct: 26 YELCEVIGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 104 KCVVKLLDHFKHSGPNGQHVCMVFEYL-GENL-LTLIKYADY-----RGVPLHMVKEICF 156
+V+LL+ + G + MVFE++ G +L ++K AD V H +++I
Sbjct: 86 PHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI-- 139
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
L L + H +IIH D+KPENVLL S
Sbjct: 140 --LEALRYCHDN-NIIHRDVKPENVLLAS 165
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 3/61 (4%)
Query: 306 KLVDFGNACWTYKQ---FTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL DFG A + + T + PEV+ Y P D+W I F L +G +
Sbjct: 173 KLGDFGVAIQLGESGLVAGGRVGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
Query: 363 F 363
F
Sbjct: 233 F 233
>pdb|3NIE|A Chain A, Crystal Structure Of Pf11_0147
pdb|3NIE|B Chain B, Crystal Structure Of Pf11_0147
Length = 429
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 42/153 (27%), Positives = 69/153 (45%), Gaps = 11/153 (7%)
Query: 36 GDTFKNGR----YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI 91
G KN + Y ++ +G G + V+LA+D + VA+K E +D +I
Sbjct: 18 GAIIKNVKVPDNYEIKHLIGRGSYGYVYLAYDKNANKNVAIK---KVNRMFEDLIDCKRI 74
Query: 92 LKQIAEGDPDDKKCVVKLLDHF-KHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHM 150
L++I + +++L D + +V E +L L K + +
Sbjct: 75 LREITILNRLKSDYIIRLHDLIIPEDLLKFDELYIVLEIADSDLKKLFKTPIF--LTEQH 132
Query: 151 VKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
VK I +++L+G +H E IIH DLKP N LL
Sbjct: 133 VKTILYNLLLGEKFIH-ESGIIHRDLKPANCLL 164
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 72/177 (40%), Gaps = 46/177 (25%)
Query: 318 KQFTNDIQTRQYRCPE-VLLGSKYSTPADLWSFACIC-----------------FELATG 359
KQ T+ + TR YR PE +LL Y+ D+WS CI F L G
Sbjct: 211 KQLTSHVVTRWYRAPELILLQENYTNSIDIWSTGCIFAELLNMMKSHINNPTNRFPLFPG 270
Query: 360 DVLFDPHSGDNYDR------DEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIR 413
F P S D+ + + D L ++ ++G P + DL+ I
Sbjct: 271 SSCF-PLSPDHNSKKVHEKSNRDQLNIIFNVIGTPPEE----------------DLKCIT 313
Query: 414 RLRFWPLNKVLIEK--YDFSEKDAN---DMADFLVPILDFVPEKRPTAAQCLTHPWI 465
+ K+ + D S+K ++ + D L +L F +KR T + L+HP++
Sbjct: 314 KQEVIKYIKLFPTRDGIDLSKKYSSISKEGIDLLESMLRFNAQKRITIDKALSHPYL 370
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 4/66 (6%)
Query: 123 VCMVFEYLGENLLTLIKYADYRG--VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPEN 180
+CM E + +L K +G +P ++ +I I+ L+HLH +LS+IH D+KP N
Sbjct: 83 ICM--ELMDTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSVIHRDVKPSN 140
Query: 181 VLLMSM 186
VL+ ++
Sbjct: 141 VLINAL 146
>pdb|1NA7|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2
Length = 329
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 68/140 (48%), Gaps = 14/140 (10%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
Y + KLG G +S V+ A + + V +K+ K + EIKIL+ + G P+
Sbjct: 39 YQLVRKLGRGKYSEVFEAINITNNEKVVVKILKPVK--KNKIKREIKILENL-RGGPN-- 93
Query: 104 KCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLD 163
++ L D K P + +VFE++ + Y+ + + ++ + IL LD
Sbjct: 94 --IITLADIVK--DPVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALD 145
Query: 164 HLHRELSIIHTDLKPENVLL 183
+ H + I+H D+KP NV++
Sbjct: 146 YCH-SMGIMHRDVKPHNVMI 164
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 15/151 (9%)
Query: 41 NGRYVVQSK-LGWGHFSTVWLAWDTQTSHYVA---LKVQKSAQHYTEAALDEIKILKQIA 96
N Y++ SK LG G F+ V T A LK ++ Q L EI +L ++A
Sbjct: 27 NNFYILTSKELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVL-ELA 85
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ P V+ L + ++ N + ++ EY G + +L V + V +
Sbjct: 86 KSCPR----VINLHEVYE----NTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLI 137
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLMSM 186
IL G+ +LH+ +I+H DLKP+N+LL S+
Sbjct: 138 KQILEGVYYLHQN-NIVHLDLKPQNILLSSI 167
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 41/166 (24%), Positives = 60/166 (36%), Gaps = 54/166 (32%)
Query: 306 KLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+VDFG +AC + + T +Y PE+L +T D+W+ I + L T
Sbjct: 174 KIVDFGMSRKIGHAC----ELREIMGTPEYLAPEILNYDPITTATDMWNIGIIAYMLLTH 229
Query: 360 DVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWP 419
P G+ D E +L + YS + F+ L
Sbjct: 230 T---SPFVGE--DNQETYLNISQ-----------VNVDYSEETFSSVSQLA--------- 264
Query: 420 LNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
DF+ +L PEKRPTA CL+H W+
Sbjct: 265 -------------------TDFIQSLLVKNPEKRPTAEICLSHSWL 291
>pdb|1JWH|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|1JWH|B Chain B, Crystal Structure Of Human Protein Kinase Ck2 Holoenzyme
pdb|3PE1|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-4945
pdb|3PE2|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 In Complex
With The Inhibitor Cx-5011
pdb|3R0T|A Chain A, Crystal Structure Of Human Protein Kinase Ck2 Alpha
Subunit In Complex With The Inhibitor Cx-5279
Length = 337
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 28.9 bits (63), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
>pdb|4DGL|C Chain C, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
pdb|4DGL|D Chain D, Crystal Structure Of The Ck2 Tetrameric Holoenzyme
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 28.5 bits (62), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 151 VKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
++ + IL LD+ H + I+H D+KP NV++
Sbjct: 133 IRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
>pdb|3JUH|A Chain A, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
pdb|3JUH|B Chain B, Crystal Structure Of A Mutant Of Human Protein Kinase
Ck2alpha With Altered Cosubstrate Specificity
Length = 335
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 29.3 bits (64), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NVL+
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVLI 164
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 60/215 (27%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 210 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 266
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 267 PP------------------------------------FYSNHG-------LAISPGMKT 283
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 284 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 337
Query: 478 ATQPQDTGGSISDKNRREKDEREAMEVRVGNIAID 512
P T + + R +D +E M + + +D
Sbjct: 338 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVD 372
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 60/215 (27%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 160 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 216
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 217 PP------------------------------------FYSNHG-------LAISPGMKT 233
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 234 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 287
Query: 478 ATQPQDTGGSISDKNRREKDEREAMEVRVGNIAID 512
P T + + R +D +E M + + +D
Sbjct: 288 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVD 322
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 60/215 (27%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 204 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 260
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 261 PP------------------------------------FYSNHG-------LAISPGMKT 277
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 278 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 331
Query: 478 ATQPQDTGGSISDKNRREKDEREAMEVRVGNIAID 512
P T + + R +D +E M + + +D
Sbjct: 332 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVD 366
Score = 28.5 bits (62), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+V+++D +++ + + +V E L G L + I+ + EI I + +
Sbjct: 117 IVRIVDVYENLYAGRKCLLIVMECLDGGELFSRIQDRGDQAFTEREASEIMKSIGEAIQY 176
Query: 165 LHRELSIIHTDLKPENVLLMS 185
LH ++I H D+KPEN+L S
Sbjct: 177 LH-SINIAHRDVKPENLLYTS 196
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 46 VQSKLGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYTEAALDEIKILKQIAEGDPDDKK 104
+ +LG G F V+ A + +TS A KV ++ E + EI IL D
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC------DHP 94
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKLLD F + ++ ++ E+ + + R + ++ +C L L++
Sbjct: 95 NIVKLLDAFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 165 LHRELSIIHTDLKPENVLL 183
LH IIH DLK N+L
Sbjct: 151 LHDN-KIIHRDLKAGNILF 168
>pdb|1PJK|A Chain A, Crystal Structure Of A C-terminal Deletion Mutant Of Human
Protein Kinase Ck2 Catalytic Subunit
pdb|2PVR|A Chain A, Crystal Structure Of The Catalytic Subunit Of Protein
Kinase Ck2 (c- Terminal Deletion Mutant 1-335) In
Complex With Two Sulfate Ions
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 169 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 225
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 226 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 279
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 280 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 163
>pdb|3H30|A Chain A, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
pdb|3H30|B Chain B, Crystal Structure Of The Catalytic Subunit Of Human
Protein Kinase Ck2 With 5,6-Dichloro-1-Beta-D-
Ribofuranosylbenzimidazole
Length = 334
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 28.5 bits (62), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
>pdb|3U87|A Chain A, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
pdb|3U87|B Chain B, Structure Of A Chimeric Construct Of Human Ck2alpha And
Human Ck2alpha' In Complex With A Non-hydrolysable
Atp-analogue
Length = 349
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 28.9 bits (63), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 34/66 (51%), Gaps = 5/66 (7%)
Query: 118 PNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLK 177
P + +VFE++ + Y+ + + ++ + IL LD+ H + I+H D+K
Sbjct: 104 PVSRTPALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVK 158
Query: 178 PENVLL 183
P NV++
Sbjct: 159 PHNVMI 164
>pdb|2ZJW|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Ellagic Acid
pdb|3AMY|A Chain A, Crystal Structure Of Human Ck2 Alpha Complexed With
Apigenin
pdb|3AT2|A Chain A, Crystal Structure Of Ck2alpha
pdb|3AT3|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivative
pdb|3AT4|A Chain A, Crystal Structure Of Ck2alpha With Pyradine Derivertive
pdb|3AXW|A Chain A, Crystal Structure Of Human Ck2alpha Complexed With A
Potent Inhibitor
Length = 340
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 175 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 231
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 232 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 285
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 286 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 329
Score = 28.5 bits (62), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 115 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 169
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 46 VQSKLGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYTEAALDEIKILKQIAEGDPDDKK 104
+ +LG G F V+ A + +TS A KV ++ E + EI IL D
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC------DHP 94
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKLLD F + ++ ++ E+ + + R + ++ +C L L++
Sbjct: 95 NIVKLLDAFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 165 LHRELSIIHTDLKPENVLL 183
LH IIH DLK N+L
Sbjct: 151 LHDN-KIIHRDLKAGNILF 168
>pdb|3MB6|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Cpa)
pdb|3MB7|A Chain A, Human Ck2 Catalytic Domain In Complex With A Difurane
Derivative Inhibitor (Amr)
pdb|3OWJ|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Pyridocarbazole Derivative Inhibitor
pdb|3OWK|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
pdb|3OWL|A Chain A, Human Ck2 Catalytic Domain In Complex With A
Benzopyridoindole Derivative Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
>pdb|3NSZ|A Chain A, Human Ck2 Catalytic Domain In Complex With Amppn
Length = 330
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 169 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 225
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 226 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 279
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 280 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 323
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 109 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 163
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 62/139 (44%), Gaps = 12/139 (8%)
Query: 46 VQSKLGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYTEAALDEIKILKQIAEGDPDDKK 104
+ +LG G F V+ A + +TS A KV ++ E + EI IL D
Sbjct: 41 IIGELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASC------DHP 94
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKLLD F + ++ ++ E+ + + R + ++ +C L L++
Sbjct: 95 NIVKLLDAFYYEN----NLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNY 150
Query: 165 LHRELSIIHTDLKPENVLL 183
LH IIH DLK N+L
Sbjct: 151 LHDN-KIIHRDLKAGNILF 168
>pdb|3Q9W|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 8.5
pdb|3Q9X|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9X|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Emodin At Ph 6.5
pdb|3Q9Y|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 8.5
pdb|3Q9Z|A Chain A, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3Q9Z|B Chain B, Crystal Structure Of Human Ck2 Alpha In Complex With
Quinalizarin At Ph 6.5
pdb|3QA0|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
pdb|3QA0|B Chain B, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
6.5
Length = 336
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 28.9 bits (63), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
>pdb|3NGA|A Chain A, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3NGA|B Chain B, Human Ck2 Catalytic Domain In Complex With Cx-4945
pdb|3U4U|A Chain A, Casein Kinase 2 In Complex With Az-Inhibitor
Length = 333
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
>pdb|2R7I|A Chain A, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|B Chain B, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|C Chain C, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
pdb|2R7I|D Chain D, Crystal Structure Of Catalytic Subunit Of Protein Kinase
Ck2
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
>pdb|3BQC|A Chain A, High Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3C13|A Chain A, Low Ph-Value Crystal Structure Of Emodin In Complex With
The Catalytic Subunit Of Protein Kinase Ck2
pdb|3FWQ|A Chain A, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3FWQ|B Chain B, Inactive Conformation Of Human Protein Kinase Ck2
Catalytic Subunit
pdb|3RPS|A Chain A, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3RPS|B Chain B, Structure Of Human Ck2alpha In Complex With The
Atp-Competitive Inhibitor
3-(4,5,6,7-Tetrabromo-1h-Benzotriazol-1-Yl)propan-1-Ol
pdb|3U9C|A Chain A, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|3U9C|B Chain B, Structure Of A C-terminal Deletion Mutant Of Human Protein
Kinase Ck2 Catalytic Subunit With The Atp-competitive
Inhibitor Resorufin
pdb|4FBX|A Chain A, Complex Structure Of Human Protein Kinase Ck2 Catalytic
Subunit Crystallized In The Presence Of A Bisubstrate
Inhibitor
Length = 335
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 170 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 226
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 227 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 280
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 281 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 324
Score = 28.5 bits (62), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 110 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 164
>pdb|3Q04|A Chain A, Crystal Structure Of The Apo-Form Of Human Ck2 Alpha At Ph
8.5
Length = 328
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 83/172 (48%), Gaps = 27/172 (15%)
Query: 304 KCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGD 360
K +L+D+G A + + +++ + +R ++ PE+L+ + Y D+WS C+ LA+
Sbjct: 168 KLRLIDWGLAEFYHPGQEYNVRVASRYFKGPELLVDYQMYDYSLDMWSLGCM---LASMI 224
Query: 361 VLFDP--HSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDL--RHIRRLR 416
+P H DNYD+ L + ++LG + +Y+ + R D+ RH R+
Sbjct: 225 FRKEPFFHGHDNYDQ----LVRIAKVLGT-EDLYDYIDKYNIELDPRFNDILGRHSRKR- 278
Query: 417 FWPLNKVLIEKYDFSEKD---ANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W E++ SE + + DFL +L + + R TA + + HP+
Sbjct: 279 -W-------ERFVHSENQHLVSPEALDFLDKLLRYDHQSRLTAREAMEHPYF 322
Score = 28.5 bits (62), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 32/60 (53%), Gaps = 5/60 (8%)
Query: 124 CMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+VFE++ + Y+ + + ++ + IL LD+ H + I+H D+KP NV++
Sbjct: 108 ALVFEHVNNTDFKQL----YQTLTDYDIRFYMYEILKALDYCH-SMGIMHRDVKPHNVMI 162
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKK 104
V + LG+G TV Q + V++ + + AL EIK+L + DD
Sbjct: 36 VSEKILGYGSSGTVVFQGSFQGR---PVAVKRMLIDFCDIALMEIKLLTE-----SDDHP 87
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE-----ICFHIL 159
V++ + S + + + E NL L++ + L + KE + I
Sbjct: 88 NVIR----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
G+ HLH L IIH DLKP+N+L+
Sbjct: 144 SGVAHLH-SLKIIHRDLKPQNILV 166
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKK 104
V + LG+G TV Q + V++ + + AL EIK+L + DD
Sbjct: 36 VSEKILGYGSSGTVVFQGSFQGR---PVAVKRMLIDFCDIALMEIKLLTE-----SDDHP 87
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE-----ICFHIL 159
V++ + S + + + E NL L++ + L + KE + I
Sbjct: 88 NVIR----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 143
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
G+ HLH L IIH DLKP+N+L+
Sbjct: 144 SGVAHLH-SLKIIHRDLKPQNILV 166
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 71/155 (45%), Gaps = 8/155 (5%)
Query: 35 MGDTFKNG--RYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKI 91
+G T + G R V+ L G F+ V+ A D + ALK + + + A + E+
Sbjct: 19 VGQTVELGELRLRVRRVLAEGGFAFVYEAQDVGSGREYALKRLLSNEEEKNRAIIQEVCF 78
Query: 92 LKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLH-- 149
+K+++ G P+ + + S ++ E L+ +K + RG PL
Sbjct: 79 MKKLS-GHPNIVQFCSAASIGKEESDTGQAEFLLLTELCKGQLVEFLKKMESRG-PLSCD 136
Query: 150 MVKEICFHILVGLDHLHRELS-IIHTDLKPENVLL 183
V +I + + H+HR+ IIH DLK EN+LL
Sbjct: 137 TVLKIFYQTCRAVQHMHRQKPPIIHRDLKVENLLL 171
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 60/215 (27%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 160 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 216
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 217 PP------------------------------------FYSNHG-------LAISPGMKT 233
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 234 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 287
Query: 478 ATQPQDTGGSISDKNRREKDEREAMEVRVGNIAID 512
P T + + R +D +E M + + +D
Sbjct: 288 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVD 322
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/215 (21%), Positives = 76/215 (35%), Gaps = 60/215 (27%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 158 KLTDFGFAKETTSHNSLTEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 214
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 215 PP------------------------------------FYSNHG-------LAISPGMKT 231
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 232 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 285
Query: 478 ATQPQDTGGSISDKNRREKDEREAMEVRVGNIAID 512
P T + + R +D +E M + + +D
Sbjct: 286 PQTPLHTSRVLKEDKERWEDVKEEMTSALATMRVD 320
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 8/86 (9%)
Query: 305 CKLVDFG---NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDV 361
KL DFG A K+ + T +Y PEV+ +S AD WS+ + FE+ TG +
Sbjct: 169 IKLTDFGLSKEAIDHEKKAYSFCGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSL 228
Query: 362 LFDPHSGDNYDRDEDHLALMMELLGM 387
P G DR E ++ LGM
Sbjct: 229 ---PFQGK--DRKETMTLILKAKLGM 249
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 64/148 (43%), Gaps = 34/148 (22%)
Query: 50 LGWGHFSTVWLAWDTQ---TSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCV 106
LG G F V+L + H A+KV K A T D ++ + + V
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKA---TLKVRDRVRTKMERDILADVNHPFV 92
Query: 107 VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICF--------- 156
VKL F+ G + ++ ++L G +L T + KE+ F
Sbjct: 93 VKLHYAFQTEGK----LYLILDFLRGGDLFT------------RLSKEVMFTEEDVKFYL 136
Query: 157 -HILVGLDHLHRELSIIHTDLKPENVLL 183
+ +GLDHLH L II+ DLKPEN+LL
Sbjct: 137 AELALGLDHLH-SLGIIYRDLKPENILL 163
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKK 104
V + LG+G TV Q + V++ + + AL EIK+L + DD
Sbjct: 18 VSEKILGYGSSGTVVFQGSFQGR---PVAVKRMLIDFCDIALMEIKLLTE-----SDDHP 69
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE-----ICFHIL 159
V++ + S + + + E NL L++ + L + KE + I
Sbjct: 70 NVIR----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
G+ HLH L IIH DLKP+N+L+
Sbjct: 126 SGVAHLH-SLKIIHRDLKPQNILV 148
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 305 CKLVDFGNACWTY---KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDV 361
KL DFG + + K+ + T +Y PEV+ ++ AD WSF + FE+ TG +
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 362 LFDPHSGDNYDRDEDHLALMMELLGM 387
P G DR E ++ LGM
Sbjct: 225 ---PFQGK--DRKETMTMILKAKLGM 245
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 151 VKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
VK + + LDHLH L II+ DLKPEN+LL
Sbjct: 128 VKFYLAELALALDHLH-SLGIIYRDLKPENILL 159
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 305 CKLVDFGNACWTY---KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDV 361
KL DFG + + K+ + T +Y PEV+ ++ AD WSF + FE+ TG +
Sbjct: 166 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 225
Query: 362 LFDPHSGDNYDRDEDHLALMMELLGM 387
P G DR E ++ LGM
Sbjct: 226 ---PFQGK--DRKETMTMILKAKLGM 246
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 151 VKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
VK + + LDHLH L II+ DLKPEN+LL
Sbjct: 129 VKFYLAELALALDHLH-SLGIIYRDLKPENILL 160
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 304 KCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDV 361
+ KL+DFG A +F N T ++ PE++ AD+WS I + L +G
Sbjct: 150 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 209
Query: 362 LFDPH---------SGDNYDRDEDHLALMMELLGMMPRKI 392
F S NYD DE++ + EL R++
Sbjct: 210 PFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRL 249
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT-------EAALDEIKILKQIA 96
Y + +LG G F+ V T A K K + + E E+ IL++I
Sbjct: 7 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 66
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ ++ L D F+ N V ++ E + G L + A+ + +
Sbjct: 67 HPN------IITLHDIFE----NKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFL 114
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH + I H DLKPEN++L+
Sbjct: 115 KQILDGVHYLHSK-RIAHFDLKPENIMLL 142
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 8/86 (9%)
Query: 305 CKLVDFGNACWTY---KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDV 361
KL DFG + + K+ + T +Y PEV+ ++ AD WSF + FE+ TG +
Sbjct: 165 IKLTDFGLSKESIDHEKKAYSFCGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTL 224
Query: 362 LFDPHSGDNYDRDEDHLALMMELLGM 387
P G DR E ++ LGM
Sbjct: 225 ---PFQGK--DRKETMTMILKAKLGM 245
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 59/145 (40%), Gaps = 28/145 (19%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+L S L K + T D ++ + + +VKL
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 110 LDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICF----------HI 158
F+ G + ++ ++L G +L T + KE+ F +
Sbjct: 92 HYAFQTEGK----LYLILDFLRGGDLFT------------RLSKEVMFTEEDVKFYLAEL 135
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
+ LDHLH L II+ DLKPEN+LL
Sbjct: 136 ALALDHLH-SLGIIYRDLKPENILL 159
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 64/144 (44%), Gaps = 18/144 (12%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKK 104
V + LG+G TV Q + V++ + + AL EIK+L + DD
Sbjct: 18 VSEKILGYGSSGTVVFQGSFQGR---PVAVKRMLIDFCDIALMEIKLLTE-----SDDHP 69
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE-----ICFHIL 159
V++ + S + + + E NL L++ + L + KE + I
Sbjct: 70 NVIR----YYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIA 125
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
G+ HLH L IIH DLKP+N+L+
Sbjct: 126 SGVAHLH-SLKIIHRDLKPQNILV 148
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%), Gaps = 3/64 (4%)
Query: 297 LLAAVDLKCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSKYSTP-ADLWSFACIC 353
++ A D KL+DFG+A + K F T +Y PEVL+G+ Y P ++WS
Sbjct: 161 IVIAEDFTIKLIDFGSAAYLERGKLFYTFCGTIEYCAPEVLMGNPYRGPELEMWSLGVTL 220
Query: 354 FELA 357
+ L
Sbjct: 221 YTLV 224
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 63/144 (43%), Gaps = 8/144 (5%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILK---QIAEGD 99
+Y S LG G F VW A D + + V +K K + + +++ K+ K +IA
Sbjct: 25 KYSTMSPLGSGAFGFVWTAVDKEKNKEVVVKFIKKEKVLEDCWIEDPKLGKVTLEIAILS 84
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
+ ++K+LD F++ G +V E G L L + D + F L
Sbjct: 85 RVEHANIIKVLDIFENQG----FFQLVMEKHGSGL-DLFAFIDRHPRLDEPLASYIFRQL 139
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
V R IIH D+K EN+++
Sbjct: 140 VSAVGYLRLKDIIHRDIKDENIVI 163
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 304 KCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDV 361
+ KL+DFG A +F N T ++ PE++ AD+WS I + L +G
Sbjct: 171 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 230
Query: 362 LFDPH---------SGDNYDRDEDHLALMMELLGMMPRKI 392
F S NYD DE++ + EL R++
Sbjct: 231 PFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRL 270
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT-------EAALDEIKILKQIA 96
Y + +LG G F+ V T A K K + + E E+ IL++I
Sbjct: 28 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIR 87
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ ++ L D F+ N V ++ E + G L + A+ + +
Sbjct: 88 HPN------IITLHDIFE----NKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFL 135
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH + I H DLKPEN++L+
Sbjct: 136 KQILDGVHYLHSK-RIAHFDLKPENIMLL 163
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 35/148 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKS----AQHYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L + T Y A+K+ K A+ L E ++L+
Sbjct: 17 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-------- 68
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICF--------- 156
L K+S +C V EY A+ + H+ +E F
Sbjct: 69 --PFLTALKYSFQTHDRLCFVMEY-----------ANGGELFFHLSRERVFSEDRARFYG 115
Query: 157 -HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ LD+LH E ++++ DLK EN++L
Sbjct: 116 AEIVSALDYLHSEKNVVYRDLKLENLML 143
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 20/96 (20%)
Query: 297 LLAAVDLKCKLVDFGNAC-------WTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
L+ D K+ DFG C T K F T +Y PEVL + Y D W
Sbjct: 141 LMLDKDGHIKITDFG-LCKEGIKDGATMKXFCG---TPEYLAPEVLEDNDYGRAVDWWGL 196
Query: 350 ACICFELATGDVLFDPHSGDNYDRDEDHL--ALMME 383
+ +E+ G + F Y++D + L ++ME
Sbjct: 197 GVVMYEMMCGRLPF-------YNQDHEKLFELILME 225
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 43/100 (43%), Gaps = 11/100 (11%)
Query: 304 KCKLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDV 361
+ KL+DFG A +F N T ++ PE++ AD+WS I + L +G
Sbjct: 157 RIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGAS 216
Query: 362 LFDPH---------SGDNYDRDEDHLALMMELLGMMPRKI 392
F S NYD DE++ + EL R++
Sbjct: 217 PFLGETKQETLTNISAVNYDFDEEYFSNTSELAKDFIRRL 256
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 63/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT-------EAALDEIKILKQIA 96
Y + +LG G F+ V T A K K + + E E+ IL++I
Sbjct: 14 YEMGEELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIR 73
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ ++ L D F+ N V ++ E + G L + A+ + +
Sbjct: 74 HPN------IITLHDIFE----NKTDVVLILELVSGGELFDFL--AEKESLTEDEATQFL 121
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH + I H DLKPEN++L+
Sbjct: 122 KQILDGVHYLHSK-RIAHFDLKPENIMLL 149
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 35/148 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKS----AQHYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L + T Y A+K+ K A+ L E ++L+
Sbjct: 18 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-------- 69
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICF--------- 156
L K+S +C V EY A+ + H+ +E F
Sbjct: 70 --PFLTALKYSFQTHDRLCFVMEY-----------ANGGELFFHLSRERVFSEDRARFYG 116
Query: 157 -HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ LD+LH E ++++ DLK EN++L
Sbjct: 117 AEIVSALDYLHSEKNVVYRDLKLENLML 144
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 26/95 (27%), Positives = 39/95 (41%), Gaps = 18/95 (18%)
Query: 297 LLAAVDLKCKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
L+ D K+ DFG T K F T +Y PEVL + Y D W
Sbjct: 142 LMLDKDGHIKITDFGLCKEGIKDGATMKXFCG---TPEYLAPEVLEDNDYGRAVDWWGLG 198
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHL--ALMME 383
+ +E+ G + F Y++D + L ++ME
Sbjct: 199 VVMYEMMCGRLPF-------YNQDHEKLFELILME 226
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 35/148 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKS----AQHYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L + T Y A+K+ K A+ L E ++L+
Sbjct: 16 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-------- 67
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICF--------- 156
L K+S +C V EY A+ + H+ +E F
Sbjct: 68 --PFLTALKYSFQTHDRLCFVMEY-----------ANGGELFFHLSRERVFSEDRARFYG 114
Query: 157 -HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ LD+LH E ++++ DLK EN++L
Sbjct: 115 AEIVSALDYLHSEKNVVYRDLKLENLML 142
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 40/96 (41%), Gaps = 20/96 (20%)
Query: 297 LLAAVDLKCKLVDFGNAC-------WTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
L+ D K+ DFG C T K F T +Y PEVL + Y D W
Sbjct: 140 LMLDKDGHIKITDFG-LCKEGIKDGATMKXFCG---TPEYLAPEVLEDNDYGRAVDWWGL 195
Query: 350 ACICFELATGDVLFDPHSGDNYDRDEDHL--ALMME 383
+ +E+ G + F Y++D + L ++ME
Sbjct: 196 GVVMYEMMCGRLPF-------YNQDHEKLFELILME 224
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 65/139 (46%), Gaps = 14/139 (10%)
Query: 46 VQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
V KLG G + +V+ A +T VA+K Q + + + EI I++Q D
Sbjct: 33 VLEKLGEGSYGSVYKAIHKETGQIVAIK-QVPVESDLQEIIKEISIMQQC------DSPH 85
Query: 106 VVKLL-DHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
VVK +FK++ + +V EY G ++ I + + + I L GL++
Sbjct: 86 VVKYYGSYFKNT-----DLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLKGLEY 140
Query: 165 LHRELSIIHTDLKPENVLL 183
LH + IH D+K N+LL
Sbjct: 141 LHF-MRKIHRDIKAGNILL 158
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/168 (23%), Positives = 57/168 (33%), Gaps = 56/168 (33%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPADLWSFACICFELA 357
KL DFG A Q T+ + R + PEV+ Y+ AD+WS E+A
Sbjct: 164 AKLADFGVA----GQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMA 219
Query: 358 TGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRF 417
G P D + M + M+P R+
Sbjct: 220 EG----KPPYADIHP---------MRAIFMIPTNPP----------------PTFRKPEL 250
Query: 418 WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
W +++ DF+ L PE+R TA Q L HP++
Sbjct: 251 W----------------SDNFTDFVKQCLVKSPEQRATATQLLQHPFV 282
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 35/148 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKS----AQHYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L + T Y A+K+ K A+ L E ++L+
Sbjct: 156 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-------- 207
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICF--------- 156
L K+S +C V EY A+ + H+ +E F
Sbjct: 208 --PFLTALKYSFQTHDRLCFVMEY-----------ANGGELFFHLSRERVFSEDRARFYG 254
Query: 157 -HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ LD+LH E ++++ DLK EN++L
Sbjct: 255 AEIVSALDYLHSEKNVVYRDLKLENLML 282
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 44/106 (41%), Gaps = 21/106 (19%)
Query: 297 LLAAVDLKCKLVDFGNAC-------WTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
L+ D K+ DFG C T K F T +Y PEVL + Y D W
Sbjct: 280 LMLDKDGHIKITDFG-LCKEGIKDGATMKTFCG---TPEYLAPEVLEDNDYGRAVDWWGL 335
Query: 350 ACICFELATGDVLFDPHSGDNYDRDEDHL--ALMMELLGMMPRKIA 393
+ +E+ G + F Y++D + L ++ME + PR +
Sbjct: 336 GVVMYEMMCGRLPF-------YNQDHEKLFELILMEEI-RFPRTLG 373
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 38/148 (25%), Positives = 59/148 (39%), Gaps = 35/148 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKS----AQHYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L + T Y A+K+ K A+ L E ++L+
Sbjct: 159 LGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH-------- 210
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICF--------- 156
L K+S +C V EY A+ + H+ +E F
Sbjct: 211 --PFLTALKYSFQTHDRLCFVMEY-----------ANGGELFFHLSRERVFSEDRARFYG 257
Query: 157 -HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ LD+LH E ++++ DLK EN++L
Sbjct: 258 AEIVSALDYLHSEKNVVYRDLKLENLML 285
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 43/105 (40%), Gaps = 19/105 (18%)
Query: 297 LLAAVDLKCKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
L+ D K+ DFG T K F T +Y PEVL + Y D W
Sbjct: 283 LMLDKDGHIKITDFGLCKEGIKDGATMKTFCG---TPEYLAPEVLEDNDYGRAVDWWGLG 339
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHL--ALMMELLGMMPRKIA 393
+ +E+ G + F Y++D + L ++ME + PR +
Sbjct: 340 VVMYEMMCGRLPF-------YNQDHEKLFELILMEEI-RFPRTLG 376
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 23/149 (15%)
Query: 321 TNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLA 379
T+ + R YR PE+++ K ++ D+WS C+ E+ LF G + + L
Sbjct: 191 THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF---RGSTF---YNQLN 244
Query: 380 LMMELLGM--MPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDAND 437
++E++G + + F +RD+ L+ V + A+
Sbjct: 245 KIVEVVGTPKIEDVVMFSSPSARDYLRN-------------SLSNVPARAWTAVVPTADP 291
Query: 438 MA-DFLVPILDFVPEKRPTAAQCLTHPWI 465
+A D + +L+F P++R + Q L HP+
Sbjct: 292 VALDLIAKMLEFNPQRRISTEQALRHPYF 320
Score = 37.4 bits (85), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 107 VKLLDHFKHSG-------------PNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE 153
++LL+HF H P + +V E + +L +I P H ++
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH-IQY 138
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+HIL+GL LH E ++H DL P N+LL
Sbjct: 139 FMYHILLGLHVLH-EAGVVHRDLHPGNILL 167
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 39.7 bits (91), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/149 (22%), Positives = 65/149 (43%), Gaps = 23/149 (15%)
Query: 321 TNDIQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLA 379
T+ + R YR PE+++ K ++ D+WS C+ E+ LF G + + L
Sbjct: 191 THYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALF---RGSTF---YNQLN 244
Query: 380 LMMELLGM--MPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDAND 437
++E++G + + F +RD+ L+ V + A+
Sbjct: 245 KIVEVVGTPKIEDVVMFSSPSARDYLRN-------------SLSNVPARAWTAVVPTADP 291
Query: 438 MA-DFLVPILDFVPEKRPTAAQCLTHPWI 465
+A D + +L+F P++R + Q L HP+
Sbjct: 292 VALDLIAKMLEFNPQRRISTEQALRHPYF 320
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 15/90 (16%)
Query: 107 VKLLDHFKHSG-------------PNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE 153
++LL+HF H P + +V E + +L +I P H ++
Sbjct: 80 IRLLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQH-IQY 138
Query: 154 ICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+HIL+GL LH E ++H DL P N+LL
Sbjct: 139 FMYHILLGLHVLH-EAGVVHRDLHPGNILL 167
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 297 LLAAVDLKCKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
+L + K+VDFG ++ + Q I T QY PE G +D++S
Sbjct: 147 ILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDVYSLG 206
Query: 351 CICFELATGDVLFDPHSGDN 370
C+ +E+ TG+ P +GD+
Sbjct: 207 CVLYEVLTGE---PPFTGDS 223
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/144 (25%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDE---IKILKQIAEGD 99
RY + LG+G S V LA D + VA+KV ++ + A D ++ ++
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
+ +V + D + P G +V EY+ L I + + P + E+
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADAC 126
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
L+ H+ IIH D+KP N+L+
Sbjct: 127 QALNFSHQN-GIIHRDVKPANILI 149
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 39.3 bits (90), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 67/160 (41%), Gaps = 38/160 (23%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQH--------------YTEAALDEI 89
Y KLG G + V L + A+KV K +Q + E +EI
Sbjct: 38 YFKVRKLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEI 97
Query: 90 KILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFE-YLGENLLTLIKYADYRGVPL 148
+LK + D ++KL D F + ++ +V E Y G L I +
Sbjct: 98 SLLKSL------DHPNIIKLFDVF----EDKKYFYLVTEFYEGGELFEQI-------INR 140
Query: 149 HMVKE-----ICFHILVGLDHLHRELSIIHTDLKPENVLL 183
H E I IL G+ +LH+ +I+H D+KPEN+LL
Sbjct: 141 HKFDECDAANIMKQILSGICYLHKH-NIVHRDIKPENILL 179
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 34/70 (48%), Gaps = 6/70 (8%)
Query: 303 LKCKLVDFGNACWTYKQFT--NDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
L K+VDFG + + K + + + T Y PEVL KY+ D+WS I + L G
Sbjct: 186 LNIKIVDFGLSSFFSKDYKLRDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCG- 243
Query: 361 VLFDPHSGDN 370
+ P G N
Sbjct: 244 --YPPFGGQN 251
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 38.9 bits (89), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 66/136 (48%), Gaps = 13/136 (9%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVK 108
KLG G F VW+ + ++ VA+K K +A L+E ++K + DK +V+
Sbjct: 19 KLGAGQFGEVWMGYYNNSTK-VAVKTLKPGTMSVQAFLEEANLMKTLQH----DK--LVR 71
Query: 109 LLDHFKHSGPNGQHVCMVFEYLGE-NLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHR 167
L P + ++ E++ + +LL +K + V L + + I G+ ++ R
Sbjct: 72 LYAVVTKEEP----IYIITEFMAKGSLLDFLKSDEGGKVLLPKLIDFSAQIAEGMAYIER 127
Query: 168 ELSIIHTDLKPENVLL 183
+ + IH DL+ NVL+
Sbjct: 128 K-NYIHRDLRAANVLV 142
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/73 (24%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ ++
Sbjct: 136 RAANVLVSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGCFTIKSN 192
Query: 346 LWSFACICFELAT 358
+WSF + +E+ T
Sbjct: 193 VWSFGILLYEIVT 205
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Query: 306 KLVDFGNAC-WTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
K+ DFG A W + + PEV+ S +S +D+WS+ + +EL TG+V F
Sbjct: 156 KITDFGLAREWHRTTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPF 214
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 15/69 (21%)
Query: 133 NLLTLIKYADYRGVPLHMV---KEICFHILV--------GLDHLHRE--LSIIHTDLKPE 179
NL ++++A RG PL+ V K I ILV G+++LH E + IIH DLK
Sbjct: 80 NLCLVMEFA--RGGPLNRVLSGKRIPPDILVNWAVQIARGMNYLHDEAIVPIIHRDLKSS 137
Query: 180 NVLLMSMID 188
N+L++ ++
Sbjct: 138 NILILQKVE 146
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 38.9 bits (89), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 100 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 149
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 150 CHSK-RVIHRDIKPENLLLGS 169
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 60/173 (34%), Gaps = 51/173 (29%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + +D+ T Y PE++ G + DLWS +C+E
Sbjct: 165 LLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 224
Query: 356 LATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRL 415
G F+ ++ + Y R I R+
Sbjct: 225 FLVGKPPFEANT--------------------------YQETYKR-----------ISRV 247
Query: 416 RF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 248 EFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 288
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/174 (23%), Positives = 60/174 (34%), Gaps = 53/174 (30%)
Query: 297 LLAAVDLKCKLVDFGNACWT-YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG +C + T T Y PE++ G + DLWS +C+E
Sbjct: 140 LLLGSAGELKIADFGWSCHAPSSRRTTLSGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
Query: 356 LATGDVLFDPHS-GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRR 414
G F+ ++ + Y R I R
Sbjct: 200 FLVGKPPFEANTYQETYKR--------------------------------------ISR 221
Query: 415 LRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 222 VEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 263
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 75 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 124
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 125 CHSK-RVIHRDIKPENLLLGS 144
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 9/74 (12%)
Query: 305 CKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K++DFG ++ + Q I T QY PE G +D++S C+ +E+ T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 359 GDVLFDPHSGDNYD 372
G+ P +GD+ D
Sbjct: 215 GE---PPFTGDSPD 225
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDE---IKILKQIAEGD 99
RY + LG+G S V LA D + VA+KV ++ + A D ++ ++
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
+ +V + D + P G +V EY+ L I + + P + E+
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADAC 126
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
L+ H+ IIH D+KP N+++
Sbjct: 127 QALNFSHQN-GIIHRDVKPANIMI 149
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 38.9 bits (89), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 42 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 99
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 100 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 149
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 150 CHSK-RVIHRDIKPENLLLGS 169
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 60/177 (33%), Gaps = 59/177 (33%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 165 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 221
Query: 353 CFELATGDVLFDPHS-GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRH 411
C+E G F+ ++ + Y R
Sbjct: 222 CYEFLVGKPPFEANTYQETYKR-------------------------------------- 243
Query: 412 IRRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
I R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 244 ISRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 288
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
T Y PE+LLG KY+ D WSF + +E+ G
Sbjct: 182 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 215
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 67/150 (44%), Gaps = 27/150 (18%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
+ + LG G F V+LA +T+ + A+K K ++ ++ E +K
Sbjct: 20 FELHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK----------DVVLMDDDVECTMVEK 69
Query: 104 KCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHM-------VKEICF 156
+ + +H P H+ F+ ENL +++Y + + H+ + F
Sbjct: 70 RVLSLAWEH-----PFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF 123
Query: 157 H---ILVGLDHLHRELSIIHTDLKPENVLL 183
+ I++GL LH + I++ DLK +N+LL
Sbjct: 124 YAAEIILGLQFLHSK-GIVYRDLKLDNILL 152
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 38.5 bits (88), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/34 (44%), Positives = 20/34 (58%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
T Y PE+LLG KY+ D WSF + +E+ G
Sbjct: 181 TPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIG 214
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 35/150 (23%), Positives = 68/150 (45%), Gaps = 27/150 (18%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
+++ LG G F V+LA +T+ + A+K K ++ ++ E +K
Sbjct: 19 FILHKMLGKGSFGKVFLAEFKKTNQFFAIKALKK----------DVVLMDDDVECTMVEK 68
Query: 104 KCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHM-------VKEICF 156
+ + +H P H+ F+ ENL +++Y + + H+ + F
Sbjct: 69 RVLSLAWEH-----PFLTHMFCTFQ-TKENLFFVMEYLNGGDLMYHIQSCHKFDLSRATF 122
Query: 157 H---ILVGLDHLHRELSIIHTDLKPENVLL 183
+ I++GL LH + I++ DLK +N+LL
Sbjct: 123 YAAEIILGLQFLHSK-GIVYRDLKLDNILL 151
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 33 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 90
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 91 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 140
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 141 CHSK-RVIHRDIKPENLLLGS 160
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 60/177 (33%), Gaps = 59/177 (33%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 156 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 212
Query: 353 CFELATGDVLFDPHS-GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRH 411
C+E G F+ ++ + Y R
Sbjct: 213 CYEFLVGKPPFEANTYQETYKR-------------------------------------- 234
Query: 412 IRRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
I R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 235 ISRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 279
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 61/140 (43%), Gaps = 21/140 (15%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDDKKCV 106
++G G F V+ D T VA+K+ + A+ E EI +L Q C
Sbjct: 26 RIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQ----------CD 75
Query: 107 VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLH--MVKEICFHILVGLD 163
+ + S + ++ EYL G + L L+K PL + I IL GLD
Sbjct: 76 SPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG-----PLEETYIATILREILKGLD 130
Query: 164 HLHRELSIIHTDLKPENVLL 183
+LH E IH D+K NVLL
Sbjct: 131 YLHSERK-IHRDIKAANVLL 149
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 28/59 (47%), Gaps = 3/59 (5%)
Query: 305 CKLVDFGNAC-WTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
KL DFG A T Q + + T + PEV+ S Y AD+WS ELA G+
Sbjct: 155 VKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGE 213
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 110 LDHFKHSGPNGQHVCMVFEY-----LGENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY + + L L K+ + R + E+ L +
Sbjct: 79 YGYFH----DATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT--YITELA----NALSY 128
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 129 CHSK-RVIHRDIKPENLLLGS 148
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/174 (22%), Positives = 58/174 (33%), Gaps = 53/174 (30%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + + T Y PE++ G + DLWS +C+E
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRXXLXGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
Query: 356 LATGDVLFDPHS-GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRR 414
G F+ ++ + Y R I R
Sbjct: 204 FLVGKPPFEANTYQETYKR--------------------------------------ISR 225
Query: 415 LRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 226 VEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 267
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 60/205 (29%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 158 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 214
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 215 PP------------------------------------FYSNHG-------LAISPGMKT 231
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 232 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 285
Query: 478 ATQPQDTGGSISDKNRREKDEREAM 502
P T + + R +D +E M
Sbjct: 286 PQTPLHTSRVLKEDKERWEDVKEEM 310
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 38.1 bits (87), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 110 LDHFKHSGPNGQHVCMVFEY-----LGENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY + + L L K+ + R + E+ L +
Sbjct: 79 YGYFH----DATRVYLILEYAPRGEVYKELQKLSKFDEQRTAT--YITELA----NALSY 128
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 129 CHSK-RVIHRDIKPENLLLGS 148
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 60/177 (33%), Gaps = 59/177 (33%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 144 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 353 CFELATGDVLFDPHS-GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRH 411
C+E G F+ ++ + Y R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKR-------------------------------------- 222
Query: 412 IRRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
I R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 223 ISRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 267
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 46/82 (56%), Gaps = 5/82 (6%)
Query: 102 DKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVG 161
D K + L H+ N ++ M + Y+G +LLTL+ + R +P M + +++
Sbjct: 132 DSKWITTL--HYAFQDDNNLYLVMDY-YVGGDLLTLLSKFEDR-LPEEMARFYLAEMVIA 187
Query: 162 LDHLHRELSIIHTDLKPENVLL 183
+D +H +L +H D+KP+N+L+
Sbjct: 188 IDSVH-QLHYVHRDIKPDNILM 208
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFD-PHSGDNYDRD-EDHL-ALMM 382
T Y PE+L G Y D W+ + FE+ G FD S DN D++ ED+L +++
Sbjct: 169 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 228
Query: 383 ELLGMMPRKIA 393
E +PR ++
Sbjct: 229 EKQIRIPRSLS 239
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 27/146 (18%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G ++ V L +T A+KV K + +D ++ K + E +
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-------- 64
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE----------ICFHIL 159
H G H C E L +I+Y + + HM ++ I
Sbjct: 65 -----HPFLVGLHSCFQTE---SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 116
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMS 185
+ L++LH E II+ DLK +NVLL S
Sbjct: 117 LALNYLH-ERGIIYRDLKLDNVLLDS 141
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFD-PHSGDNYDRD-EDHL-ALMM 382
T Y PE+L G Y D W+ + FE+ G FD S DN D++ ED+L +++
Sbjct: 173 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 232
Query: 383 ELLGMMPRKIA 393
E +PR ++
Sbjct: 233 EKQIRIPRSLS 243
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 27/146 (18%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G ++ V L +T A+KV K + +D ++ K + E +
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-------- 68
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE----------ICFHIL 159
H G H C E L +I+Y + + HM ++ I
Sbjct: 69 -----HPFLVGLHSCFQTE---SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 120
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMS 185
+ L++LH E II+ DLK +NVLL S
Sbjct: 121 LALNYLH-ERGIIYRDLKLDNVLLDS 145
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFD-PHSGDNYDRD-EDHL-ALMM 382
T Y PE+L G Y D W+ + FE+ G FD S DN D++ ED+L +++
Sbjct: 216 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 275
Query: 383 ELLGMMPRKIA 393
E +PR ++
Sbjct: 276 EKQIRIPRSLS 286
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 36/146 (24%), Positives = 59/146 (40%), Gaps = 27/146 (18%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G ++ V L +T A++V K + +D ++ K + E +
Sbjct: 60 IGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQASN-------- 111
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE----------ICFHIL 159
H G H C E L +I+Y + + HM ++ I
Sbjct: 112 -----HPFLVGLHSCFQTE---SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 163
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMS 185
+ L++LH E II+ DLK +NVLL S
Sbjct: 164 LALNYLH-ERGIIYRDLKLDNVLLDS 188
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 40/86 (46%), Gaps = 17/86 (19%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEV 334
I++D K S +L +D + KL DFG Q + D+ R+ + PEV
Sbjct: 163 IHRDIKSDS------ILLTLDGRVKLSDFGFCA----QISKDVPKRKXLVGTPYWMAPEV 212
Query: 335 LLGSKYSTPADLWSFACICFELATGD 360
+ S Y+T D+WS + E+ G+
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDGE 238
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 74 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 123
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 124 CHSK-RVIHRDIKPENLLLGS 143
Score = 35.4 bits (80), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 58/176 (32%), Gaps = 57/176 (32%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 139 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHI 412
C+E G P + Y Y R I
Sbjct: 196 CYEFLVGK---PPFEANTYQET-----------------------YKR-----------I 218
Query: 413 RRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 219 SRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 262
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 38.1 bits (87), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 60/205 (29%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 174 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 230
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 231 PP------------------------------------FYSNHG-------LAISPGMKT 247
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 248 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 301
Query: 478 ATQPQDTGGSISDKNRREKDEREAM 502
P T + + R +D +E M
Sbjct: 302 PQTPLHTSRVLKEDKERWEDVKEEM 326
>pdb|2PZI|A Chain A, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
pdb|2PZI|B Chain B, Crystal Structure Of Protein Kinase Pkng From
Mycobacterium Tuberculosis In Complex With
Tetrahydrobenzothiophene Ax20017
Length = 681
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 43/80 (53%), Gaps = 5/80 (6%)
Query: 105 CVVKLLDHFKHSGPNGQHVC-MVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLD 163
+V++ + +H+ +G V +V EY+G L K + + +P+ IL L
Sbjct: 140 SIVQIFNFVEHTDRHGDPVGYIVMEYVGGQSL---KRSKGQKLPVAEAIAYLLEILPALS 196
Query: 164 HLHRELSIIHTDLKPENVLL 183
+LH + +++ DLKPEN++L
Sbjct: 197 YLH-SIGLVYNDLKPENIML 215
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 79 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 128
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 129 CHSK-RVIHRDIKPENLLLGS 148
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 59/177 (33%), Gaps = 59/177 (33%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE + G + DLWS +
Sbjct: 144 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEXIEGRXHDEKVDLWSLGVL 200
Query: 353 CFELATGDVLFDPHS-GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRH 411
C+E G F+ ++ + Y R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKR-------------------------------------- 222
Query: 412 IRRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
I R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 223 ISRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPXLREVLEHPWITA 267
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 76 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 125
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 126 CHSK-RVIHRDIKPENLLLGS 145
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 58/176 (32%), Gaps = 57/176 (32%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ +FG W+ + T T Y PE++ G + DLWS +
Sbjct: 141 LLLGSAGELKIANFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 197
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHI 412
C+E G P + Y Y R I
Sbjct: 198 CYEFLVGK---PPFEANTYQET-----------------------YKR-----------I 220
Query: 413 RRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 221 SRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 264
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 74 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 123
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 124 CHSK-RVIHRDIKPENLLLGS 143
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 60/177 (33%), Gaps = 59/177 (33%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 139 LLLGSAGELKIADFG---WSVHAPSSRRTELCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 353 CFELATGDVLFDPHS-GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRH 411
C+E G F+ ++ + Y R
Sbjct: 196 CYEFLVGKPPFEANTYQETYKR-------------------------------------- 217
Query: 412 IRRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
I R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 218 ISRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 262
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 79 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 128
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 129 CHSK-RVIHRDIKPENLLLGS 148
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 41/177 (23%), Positives = 60/177 (33%), Gaps = 59/177 (33%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 144 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 200
Query: 353 CFELATGDVLFDPHS-GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRH 411
C+E G F+ ++ + Y R
Sbjct: 201 CYEFLVGKPPFEANTYQETYKR-------------------------------------- 222
Query: 412 IRRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
I R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 223 ISRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 267
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 75 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 124
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 125 CHSK-RVIHRDIKPENLLLGS 144
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 40/173 (23%), Positives = 57/173 (32%), Gaps = 51/173 (29%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + + + T Y PE++ G + DLWS +C+E
Sbjct: 140 LLLGSAGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
Query: 356 LATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRL 415
G P + Y Y R I R+
Sbjct: 200 FLVGK---PPFEANTYQET-----------------------YKR-----------ISRV 222
Query: 416 RF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 223 EFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 263
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 17 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 74
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 75 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 124
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 125 CHSK-RVIHRDIKPENLLLGS 144
Score = 35.8 bits (81), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 57/173 (32%), Gaps = 51/173 (29%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + D+ T Y PE++ G + DLWS +C+E
Sbjct: 140 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 199
Query: 356 LATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRL 415
G P + Y Y R I R+
Sbjct: 200 FLVGK---PPFEANTYQET-----------------------YKR-----------ISRV 222
Query: 416 RF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 223 EFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 263
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/120 (27%), Positives = 55/120 (45%), Gaps = 18/120 (15%)
Query: 78 AQHYTEAALDEIKILKQIAEGDPDDKKCVVK----LLDHFKHSGPNGQHVCMVFEYLGEN 133
A+H E +K+L++ A ++K ++ LL + KH G H +
Sbjct: 57 ARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVGLHFSF---QTADK 113
Query: 134 LLTLIKYADYRGVPLHMVKEICF----------HILVGLDHLHRELSIIHTDLKPENVLL 183
L ++ Y + + H+ +E CF I L +LH L+I++ DLKPEN+LL
Sbjct: 114 LYFVLDYINGGELFYHLQRERCFLEPRARFYAAEIASALGYLH-SLNIVYRDLKPENILL 172
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 18 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 75
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 76 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 125
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 126 CHSK-RVIHRDIKPENLLLGS 145
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 48/144 (33%), Gaps = 52/144 (36%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS-GDNYDRDEDHLALMMEL 384
T Y PE++ G + DLWS +C+E G F+ ++ + Y R
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQETYKR----------- 219
Query: 385 LGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRF-WPLNKVLIEKYDFSEKDANDMADFLV 443
I R+ F +P DF + A D+ L
Sbjct: 220 ---------------------------ISRVEFTFP---------DFVTEGARDLISRL- 242
Query: 444 PILDFVPEKRPTAAQCLTHPWINV 467
L P +RP + L HPWI
Sbjct: 243 --LKHNPSQRPMLREVLEHPWITA 264
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 60/205 (29%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 159 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 215
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 216 PP------------------------------------FYSNHG-------LAISPGMKT 232
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 233 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 286
Query: 478 ATQPQDTGGSISDKNRREKDEREAM 502
P T + + R +D +E M
Sbjct: 287 PQTPLHTSRVLKEDKERWEDVKEEM 311
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 67/145 (46%), Gaps = 16/145 (11%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPD 101
++ + KLG G F V L + + +K + +Q E EI++LK +
Sbjct: 24 FIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSL------ 77
Query: 102 DKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLH--MVKEICFHI 158
D ++K+ + F+ + ++ +V E G LL I A RG L V E+ +
Sbjct: 78 DHPNIIKIFEVFE----DYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQM 133
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
+ L + H + ++H DLKPEN+L
Sbjct: 134 MNALAYFHSQ-HVVHKDLKPENILF 157
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 13/27 (48%), Positives = 16/27 (59%)
Query: 439 ADFLVPILDFVPEKRPTAAQCLTHPWI 465
D L +L PE+RP+AAQ L H W
Sbjct: 256 VDLLKQMLTKDPERRPSAAQVLHHEWF 282
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 21 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 78
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 79 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 128
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 129 CHSK-RVIHRDIKPENLLLGS 148
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 57/173 (32%), Gaps = 51/173 (29%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + D+ T Y PE++ G + DLWS +C+E
Sbjct: 144 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 203
Query: 356 LATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRL 415
G P + Y Y R I R+
Sbjct: 204 FLVGK---PPFEANTYQET-----------------------YKR-----------ISRV 226
Query: 416 RF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 227 EFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 267
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 305 CKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K++DFG ++ + Q I T QY PE G +D++S C+ +E+ T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 359 GDVLFDPHSGDN 370
G+ P +GD+
Sbjct: 215 GE---PPFTGDS 223
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDE---IKILKQIAEGD 99
RY + LG+G S V LA D + VA+KV ++ + A D ++ ++
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
+ +V + D + P G +V EY+ L I + + P + E+
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADAC 126
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
L+ H+ IIH D+KP N+++
Sbjct: 127 QALNFSHQN-GIIHRDVKPANIMI 149
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 38.1 bits (87), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 9/72 (12%)
Query: 305 CKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K++DFG ++ + Q I T QY PE G +D++S C+ +E+ T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 359 GDVLFDPHSGDN 370
G+ P +GD+
Sbjct: 215 GE---PPFTGDS 223
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDE---IKILKQIAEGD 99
RY + LG+G S V LA D + VA+KV ++ + A D ++ ++
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
+ +V + D + P G +V EY+ L I + + P + E+
Sbjct: 68 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADAC 126
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
L+ H+ IIH D+KP N+++
Sbjct: 127 QALNFSHQN-GIIHRDVKPANIMI 149
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 305 CKLVDFGNACW------TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K++DFG A + Q I T QY PE G +D++S C+ +E+ T
Sbjct: 155 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 214
Query: 359 GDVLFDPHSGDN 370
G+ P +GD+
Sbjct: 215 GE---PPFTGDS 223
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 62/144 (43%), Gaps = 10/144 (6%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDE---IKILKQIAEGD 99
RY + LG+G S V LA D + VA+KV ++ + A D ++ ++
Sbjct: 13 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 67
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
+ +V + + P G +V EY+ L I + + P + E+
Sbjct: 68 ALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADAC 126
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
L+ H+ IIH D+KP N+++
Sbjct: 127 QALNFSHQN-GIIHRDVKPANIMI 149
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 38/181 (20%)
Query: 13 SDYTSEDEGTEDYRRGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVAL 72
S TS + G E R + +R V K G+G V T A+
Sbjct: 2 SSETSVNRGPEKIRPECFELLR-----------VLGKGGYGKVFQVRKVTGANTGKIFAM 50
Query: 73 KVQKSAQHYTEA-----ALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVF 127
KV K A A E IL+++ +V L+ F+ G + ++
Sbjct: 51 KVLKKAMIVRNAKDTAHTKAERNILEEVKH------PFIVDLIYAFQ----TGGKLYLIL 100
Query: 128 EYL--GENLLTLIKYADYRGVPLHMVKEICFH---ILVGLDHLHRELSIIHTDLKPENVL 182
EYL GE + L + + M CF+ I + L HLH++ II+ DLKPEN++
Sbjct: 101 EYLSGGELFMQLEREGIF------MEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIM 153
Query: 183 L 183
L
Sbjct: 154 L 154
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T +Y PE+L+ S ++ D WS + +++ TG P +G+N + D +
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA---PPFTGENRKKTIDKI 233
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 49/181 (27%), Positives = 73/181 (40%), Gaps = 38/181 (20%)
Query: 13 SDYTSEDEGTEDYRRGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVAL 72
S TS + G E R + +R V K G+G V T A+
Sbjct: 2 SSETSVNRGPEKIRPECFELLR-----------VLGKGGYGKVFQVRKVTGANTGKIFAM 50
Query: 73 KVQKSAQHYTEA-----ALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVF 127
KV K A A E IL+++ +V L+ F+ G + ++
Sbjct: 51 KVLKKAMIVRNAKDTAHTKAERNILEEVKH------PFIVDLIYAFQ----TGGKLYLIL 100
Query: 128 EYL--GENLLTLIKYADYRGVPLHMVKEICFH---ILVGLDHLHRELSIIHTDLKPENVL 182
EYL GE + L + + M CF+ I + L HLH++ II+ DLKPEN++
Sbjct: 101 EYLSGGELFMQLEREGIF------MEDTACFYLAEISMALGHLHQK-GIIYRDLKPENIM 153
Query: 183 L 183
L
Sbjct: 154 L 154
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 15/53 (28%), Positives = 28/53 (52%), Gaps = 3/53 (5%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHL 378
T +Y PE+L+ S ++ D WS + +++ TG P +G+N + D +
Sbjct: 184 TIEYMAPEILMRSGHNRAVDWWSLGALMYDMLTGA---PPFTGENRKKTIDKI 233
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 9/72 (12%)
Query: 305 CKLVDFGNACW------TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K++DFG A + Q I T QY PE G +D++S C+ +E+ T
Sbjct: 172 VKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLT 231
Query: 359 GDVLFDPHSGDN 370
G+ P +GD+
Sbjct: 232 GE---PPFTGDS 240
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/144 (25%), Positives = 63/144 (43%), Gaps = 10/144 (6%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDE---IKILKQIAEGD 99
RY + LG+G S V LA D + VA+KV ++ + A D ++ ++
Sbjct: 30 RYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRA-----DLARDPSFYLRFRREAQNAA 84
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
+ +V + D + P G +V EY+ L I + + P + E+
Sbjct: 85 ALNHPAIVAVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTEGPMTPKRAI-EVIADAC 143
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
L+ H+ IIH D+KP N+++
Sbjct: 144 QALNFSHQN-GIIHRDVKPANIMI 166
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 77 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 126
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 127 CHSK-RVIHRDIKPENLLLGS 146
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/143 (23%), Positives = 46/143 (32%), Gaps = 50/143 (34%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T Y PE++ G + DLWS +C+E G P + Y
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTYQET----------- 217
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRF-WPLNKVLIEKYDFSEKDANDMADFLVP 444
Y R I R+ F +P DF + A D+ L
Sbjct: 218 ------------YKR-----------ISRVEFTFP---------DFVTEGARDLISRL-- 243
Query: 445 ILDFVPEKRPTAAQCLTHPWINV 467
L P +RP + L HPWI
Sbjct: 244 -LKHNPSQRPMLREVLEHPWITA 265
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 37.7 bits (86), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 44/172 (25%), Positives = 61/172 (35%), Gaps = 51/172 (29%)
Query: 300 AVDLKCKLVDFGNACWTYKQ--FTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELA 357
A D K+ DFG + Q T Y PE+L G Y D+WS I + L
Sbjct: 185 APDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILL 244
Query: 358 TGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRF 417
G F+P F++ GD RR+
Sbjct: 245 CG---FEP------------------------------------FYDERGDQFMFRRI-- 263
Query: 418 WPLN---KVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
LN + +D +A D+ L+ +LD P+KR T Q L HPW+
Sbjct: 264 --LNCEYYFISPWWDEVSLNAKDLVRKLI-VLD--PKKRLTTFQALQHPWVT 310
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 63/141 (44%), Gaps = 17/141 (12%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
+ V+S+LG G S V+ T ALKV K + EI +L +++ +
Sbjct: 55 FEVESELGRGATSIVYRCKQKGTQKPYALKVLKKTVD-KKIVRTEIGVLLRLSHPN---- 109
Query: 104 KCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICFHILVG 161
++KL + F+ + +V E + GE +++ Y + IL
Sbjct: 110 --IIKLKEIFE----TPTEISLVLELVTGGELFDRIVEKGYYSE---RDAADAVKQILEA 160
Query: 162 LDHLHRELSIIHTDLKPENVL 182
+ +LH E I+H DLKPEN+L
Sbjct: 161 VAYLH-ENGIVHRDLKPENLL 180
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 77 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 126
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 127 CHSK-RVIHRDIKPENLLLGS 146
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 58/173 (33%), Gaps = 51/173 (29%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + +D+ T Y PE++ G + DLWS +C+E
Sbjct: 142 LLLGSAGELKIADFGWSVHAPSSRRDDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 201
Query: 356 LATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRL 415
G P + Y Y R I R+
Sbjct: 202 FLVGK---PPFEANTYQET-----------------------YKR-----------ISRV 224
Query: 416 RF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 225 EFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 265
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 30/145 (20%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI-----------CFHI 158
LDH P + F+ E L + YA G L +++I I
Sbjct: 89 LDH-----PFFVKLYFTFQD-DEKLYFGLSYAK-NGCLLKYIRKIGSFDETCTRFYTAEI 141
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
+ L++LH + IIH DLKPEN+LL
Sbjct: 142 VSALEYLHGK-GIIHRDLKPENILL 165
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNACWT-----YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A + + + T QY PE+L S +DLW+ C
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSASKSSDLWALGC 222
Query: 352 ICFELATG 359
I ++L G
Sbjct: 223 IIYQLVAG 230
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 77 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 126
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 127 CHSK-RVIHRDIKPENLLLGS 146
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 58/176 (32%), Gaps = 57/176 (32%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 142 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHI 412
C+E G P + Y Y R I
Sbjct: 199 CYEFLVGK---PPFEANTYQET-----------------------YKR-----------I 221
Query: 413 RRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 222 SRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 265
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 60/205 (29%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 166 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 222
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 223 PP------------------------------------FYSNHG-------LAISPGMKT 239
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 240 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 293
Query: 478 ATQPQDTGGSISDKNRREKDEREAM 502
P T + + R +D +E M
Sbjct: 294 PQTPLHTSRVLKEDKERWEDVKEEM 318
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 37.7 bits (86), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 37/71 (52%), Gaps = 3/71 (4%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFD-PHSGDNYDRD-EDHL-ALMM 382
T Y PE+L G Y D W+ + FE+ G FD S DN D++ ED+L +++
Sbjct: 184 TPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVIL 243
Query: 383 ELLGMMPRKIA 393
E +PR ++
Sbjct: 244 EKQIRIPRSMS 254
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 59/146 (40%), Gaps = 27/146 (18%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
+G G ++ V L +T A+KV K + +D ++ K + E +
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASN-------- 79
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKE----------ICFHIL 159
H G H C E L +I+Y + + HM ++ I
Sbjct: 80 -----HPFLVGLHSCFQTE---SRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEIS 131
Query: 160 VGLDHLHRELSIIHTDLKPENVLLMS 185
+ L++LH E II+ DLK +NVLL S
Sbjct: 132 LALNYLH-ERGIIYRDLKLDNVLLDS 156
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 74 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 123
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 124 CHSK-RVIHRDIKPENLLLGS 143
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 57/173 (32%), Gaps = 51/173 (29%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + D+ T Y PE++ G + DLWS +C+E
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 356 LATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRL 415
G P + Y Y R I R+
Sbjct: 199 FLVGK---PPFEANTYQET-----------------------YKR-----------ISRV 221
Query: 416 RF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 222 EFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 262
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 77 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 126
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 127 CHSK-RVIHRDIKPENLLLGS 146
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 41/175 (23%), Positives = 58/175 (33%), Gaps = 57/175 (32%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ +FG W+ + T T Y PE++ G + DLWS +
Sbjct: 142 LLLGSAGELKIANFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHI 412
C+E G P + Y Y R I
Sbjct: 199 CYEFLVGK---PPFEANTYQET-----------------------YKR-----------I 221
Query: 413 RRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 222 SRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWIT 264
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 60/205 (29%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 164 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 220
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 221 PP------------------------------------FYSNHG-------LAISPGMKT 237
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 238 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 291
Query: 478 ATQPQDTGGSISDKNRREKDEREAM 502
P T + + R +D +E M
Sbjct: 292 PQTPLHTSRVLKEDKERWEDVKEEM 316
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 37.7 bits (86), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 46/205 (22%), Positives = 72/205 (35%), Gaps = 60/205 (29%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D+WS I + L G +
Sbjct: 165 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCG---Y 221
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 222 PP------------------------------------FYSNHG-------LAISPGMKT 238
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + + HPWI ++ +
Sbjct: 239 RIRMGQYEFPNPEWSEVSEEVKMLIRNLLKTEPTQRMTITEFMNHPWI------MQSTKV 292
Query: 478 ATQPQDTGGSISDKNRREKDEREAM 502
P T + + R +D +E M
Sbjct: 293 PQTPLHTSRVLKEDKERWEDVKEEM 317
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 304 KCKLVDFGNAC-WTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
+ KL DFG A T Q + + T + PEV+ S Y + AD+WS ELA G+
Sbjct: 157 EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 216
Query: 361 VLFDPHS 367
PHS
Sbjct: 217 ---PPHS 220
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDDKKCV 106
K+G G F V+ D +T VA+K+ + A+ E EI +L Q C
Sbjct: 29 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ----------CD 78
Query: 107 VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPL--HMVKEICFHILVGLD 163
+ + S + ++ EYL G + L L++ PL + I IL GLD
Sbjct: 79 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 133
Query: 164 HLHRELSIIHTDLKPENVLL 183
+LH E IH D+K NVLL
Sbjct: 134 YLHSEKK-IHRDIKAANVLL 152
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
Query: 301 VDLK---CKLVDFGNACWTYKQ-FTNDIQTRQYRCPEVLLGSKY-STPADLWSFACICFE 355
+DL+ KL+DFG+ + + +T+ TR Y PE + +Y + PA +WS + ++
Sbjct: 172 IDLRRGCAKLIDFGSGALLHDEPYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYD 231
Query: 356 LATGDVLFD 364
+ GD+ F+
Sbjct: 232 MVCGDIPFE 240
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 20 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 78 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 127
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 128 CHSK-RVIHRDIKPENLLLGS 147
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 42/176 (23%), Positives = 58/176 (32%), Gaps = 57/176 (32%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 143 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHI 412
C+E G P + Y Y R I
Sbjct: 200 CYEFLVGK---PPFEANTYQET-----------------------YKR-----------I 222
Query: 413 RRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 223 SRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 266
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 74 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 123
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 124 CHSK-RVIHRDIKPENLLLGS 143
Score = 35.8 bits (81), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 41/173 (23%), Positives = 57/173 (32%), Gaps = 51/173 (29%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + D+ T Y PE++ G + DLWS +C+E
Sbjct: 139 LLLGSAGELKIADFGWSVHAPSSRRTDLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 198
Query: 356 LATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRL 415
G P + Y Y R I R+
Sbjct: 199 FLVGK---PPFEANTYQET-----------------------YKR-----------ISRV 221
Query: 416 RF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINV 467
F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 222 EFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWITA 262
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 65/176 (36%), Gaps = 50/176 (28%)
Query: 297 LLAAVDLK---CKLVDFGNACWT---YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
LL A LK KL DFG A + + T Y PEVL Y P DLW+
Sbjct: 152 LLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG 211
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
I + L G F +D D+ L ++ G Y DF +
Sbjct: 212 VILYILLVGYPPF-------WDEDQHRLYQQIK-----------AGAY--DFPS------ 245
Query: 411 HIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
++D +A D+ + +L P KR TAA+ L HPWI+
Sbjct: 246 ---------------PEWDTVTPEAKDLIN---KMLTINPSKRITAAEALKHPWIS 283
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLLMSMI 187
IL + H H ++ ++H DLKPEN+LL S +
Sbjct: 130 ILEAVLHCH-QMGVVHRDLKPENLLLASKL 158
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 74 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 123
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 124 CHSK-RVIHRDIKPENLLLGS 143
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 46/142 (32%), Gaps = 50/142 (35%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T Y PE++ G + DLWS +C+E G P + Y
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTYQET----------- 214
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRF-WPLNKVLIEKYDFSEKDANDMADFLVP 444
Y R I R+ F +P DF + A D+ L
Sbjct: 215 ------------YKR-----------ISRVEFTFP---------DFVTEGARDLISRL-- 240
Query: 445 ILDFVPEKRPTAAQCLTHPWIN 466
L P +RP + L HPWI
Sbjct: 241 -LKHNPSQRPMLREVLEHPWIT 261
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 74 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 123
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 124 CHSK-RVIHRDIKPENLLLGS 143
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 46/142 (32%), Gaps = 50/142 (35%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T Y PE++ G + DLWS +C+E G P + Y
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTYQET----------- 214
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRF-WPLNKVLIEKYDFSEKDANDMADFLVP 444
Y R I R+ F +P DF + A D+ L
Sbjct: 215 ------------YKR-----------ISRVEFTFP---------DFVTEGARDLISRL-- 240
Query: 445 ILDFVPEKRPTAAQCLTHPWIN 466
L P +RP + L HPWI
Sbjct: 241 -LKHNPSQRPMLREVLEHPWIT 261
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/154 (25%), Positives = 71/154 (46%), Gaps = 28/154 (18%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQK-SAQHYTEAALDEIK--------ILK 93
+Y + +G G S V T H A+K+ + +A+ + L+E++ IL+
Sbjct: 95 KYDPKDVIGRGVSSVVRRCVHRATGHEFAVKIMEVTAERLSPEQLEEVREATRRETHILR 154
Query: 94 QIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHM--- 150
Q+A G P ++ L+D ++ S F +L +L+ + DY + +
Sbjct: 155 QVA-GHPH----IITLIDSYESSS---------FMFLVFDLMRKGELFDYLTEKVALSEK 200
Query: 151 -VKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ I +L + LH +I+H DLKPEN+LL
Sbjct: 201 ETRSIMRSLLEAVSFLHAN-NIVHRDLKPENILL 233
Score = 32.0 bits (71), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 41/176 (23%), Positives = 61/176 (34%), Gaps = 60/176 (34%)
Query: 302 DLKCKLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGSK------YSTPADLWSFACIC 353
+++ +L DFG +C ++ T Y PE+L S Y DLW+ I
Sbjct: 236 NMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVIL 295
Query: 354 FELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIR 413
F L G S F++R R I
Sbjct: 296 FTLLAG---------------------------------------SPPFWHR----RQIL 312
Query: 414 RLRFWPLNKVLIEKYDFSEKDAND----MADFLVPILDFVPEKRPTAAQCLTHPWI 465
LR ++ +Y FS + +D + D + +L PE R TA Q L HP+
Sbjct: 313 MLRM-----IMEGQYQFSSPEWDDRSSTVKDLISRLLQVDPEARLTAEQALQHPFF 363
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 16 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 74 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 123
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 124 CHSK-RVIHRDIKPENLLLGS 143
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 58/175 (33%), Gaps = 57/175 (32%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 139 LLLGSAGELKIADFG---WSVHAPSSRRTXLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 195
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHI 412
C+E G P + Y Y R I
Sbjct: 196 CYEFLVGK---PPFEANTYQET-----------------------YKR-----------I 218
Query: 413 RRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 219 SRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWIT 261
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 48/176 (27%), Positives = 65/176 (36%), Gaps = 50/176 (28%)
Query: 297 LLAAVDLK---CKLVDFGNACWT---YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
LL A LK KL DFG A + + T Y PEVL Y P DLW+
Sbjct: 141 LLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDLWACG 200
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
I + L G F +D D+ L ++ G Y DF +
Sbjct: 201 VILYILLVGYPPF-------WDEDQHRLYQQIK-----------AGAY--DFPS------ 234
Query: 411 HIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
++D +A D+ + +L P KR TAA+ L HPWI+
Sbjct: 235 ---------------PEWDTVTPEAKDLIN---KMLTINPSKRITAAEALKHPWIS 272
Score = 29.3 bits (64), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 21/30 (70%), Gaps = 1/30 (3%)
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLLMSMI 187
IL + H H ++ ++H +LKPEN+LL S +
Sbjct: 119 ILEAVLHCH-QMGVVHRNLKPENLLLASKL 147
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 37.4 bits (85), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 15 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 72
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 73 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 122
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 123 CHSK-RVIHRDIKPENLLLGS 142
Score = 35.4 bits (80), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 58/175 (33%), Gaps = 57/175 (32%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 138 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 194
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHI 412
C+E G P + Y Y R I
Sbjct: 195 CYEFLVGK---PPFEANTYQET-----------------------YKR-----------I 217
Query: 413 RRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 218 SRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWIT 260
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 304 KCKLVDFGNACW---TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
+ KL DFG A T + + T + PEV+ S Y + AD+WS ELA G+
Sbjct: 142 EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
Query: 361 VLFDPHS 367
PHS
Sbjct: 202 ---PPHS 205
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDDKKCV 106
K+G G F V+ D +T VA+K+ + A+ E EI +L Q C
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ----------CD 63
Query: 107 VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPL--HMVKEICFHILVGLD 163
+ + S + ++ EYL G + L L++ PL + I IL GLD
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 118
Query: 164 HLHRELSIIHTDLKPENVLL 183
+LH E IH D+K NVLL
Sbjct: 119 YLHSEKK-IHRDIKAANVLL 137
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 32/67 (47%), Gaps = 6/67 (8%)
Query: 304 KCKLVDFGNACW---TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
+ KL DFG A T + + T + PEV+ S Y + AD+WS ELA G+
Sbjct: 162 EVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 221
Query: 361 VLFDPHS 367
PHS
Sbjct: 222 ---PPHS 225
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDDKKCV 106
K+G G F V+ D +T VA+K+ + A+ E EI +L Q C
Sbjct: 34 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ----------CD 83
Query: 107 VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPL--HMVKEICFHILVGLD 163
+ + S + ++ EYL G + L L++ PL + I IL GLD
Sbjct: 84 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 138
Query: 164 HLHRELSIIHTDLKPENVLL 183
+LH E IH D+K NVLL
Sbjct: 139 YLHSEKK-IHRDIKAANVLL 157
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 77 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 126
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 127 CHSK-RVIHRDIKPENLLLGS 146
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 58/175 (33%), Gaps = 57/175 (32%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 142 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 198
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHI 412
C+E G P + Y Y R I
Sbjct: 199 CYEFLVGK---PPFEANTYQET-----------------------YKR-----------I 221
Query: 413 RRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 222 SRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWIT 264
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 66/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV AQ E A E ++ +++ +++L
Sbjct: 19 LGKGKFGNVYLAREKQSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 76
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 77 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 126
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 127 CHSK-RVIHRDIKPENLLLGS 146
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 46/142 (32%), Gaps = 50/142 (35%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T Y PE++ G + DLWS +C+E G P + Y
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGK---PPFEANTYQET----------- 217
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRF-WPLNKVLIEKYDFSEKDANDMADFLVP 444
Y R I R+ F +P DF + A D+ L
Sbjct: 218 ------------YKR-----------ISRVEFTFP---------DFVTEGARDLISRL-- 243
Query: 445 ILDFVPEKRPTAAQCLTHPWIN 466
L P +RP + L HPWI
Sbjct: 244 -LKHNPSQRPMLREVLEHPWIT 264
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 37.4 bits (85), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 6/67 (8%)
Query: 304 KCKLVDFGNAC-WTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
+ KL DFG A T Q + + T + PEV+ S Y + AD+WS ELA G+
Sbjct: 142 EVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGE 201
Query: 361 VLFDPHS 367
PHS
Sbjct: 202 ---PPHS 205
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 43/140 (30%), Positives = 62/140 (44%), Gaps = 21/140 (15%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDDKKCV 106
K+G G F V+ D +T VA+K+ + A+ E EI +L Q C
Sbjct: 14 KIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQ----------CD 63
Query: 107 VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPL--HMVKEICFHILVGLD 163
+ + S + ++ EYL G + L L++ PL + I IL GLD
Sbjct: 64 SPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG-----PLDETQIATILREILKGLD 118
Query: 164 HLHRELSIIHTDLKPENVLL 183
+LH E IH D+K NVLL
Sbjct: 119 YLHSEKK-IHRDIKAANVLL 137
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 45/79 (56%), Gaps = 9/79 (11%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
VV+L F+ + +++ MV EY+ G +L+ L+ D VP K +++ LD
Sbjct: 137 VVQLFCAFQ----DDKYLYMVMEYMPGGDLVNLMSNYD---VPEKWAKFYTAEVVLALDA 189
Query: 165 LHRELSIIHTDLKPENVLL 183
+H + +IH D+KP+N+LL
Sbjct: 190 IH-SMGLIHRDVKPDNMLL 207
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 37.4 bits (85), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 72/149 (48%), Gaps = 14/149 (9%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT----EAALD-EIKILKQIA 96
G+Y++ LG G + V D++T A+K+ K + EA + EI++L+++
Sbjct: 5 GKYLMGDLLGEGSYGKVKEVLDSETLCRRAVKILKKKKLRRIPNGEANVKKEIQLLRRLR 64
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICF 156
K V++L+D + Q + MV EY + ++ + P+
Sbjct: 65 H------KNVIQLVDVLYNE--EKQKMYMVMEYCVCGMQEMLDSVPEKRFPVCQAHGYFC 116
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
++ GL++LH + I+H D+KP N+LL +
Sbjct: 117 QLIDGLEYLHSQ-GIVHKDIKPGNLLLTT 144
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 37.4 bits (85), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 66
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 67 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 117
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 118 EIVSALEYLHGK-GIIHRDLKPENILL 143
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 141 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 200
Query: 352 ICFELATG 359
I ++L G
Sbjct: 201 IIYQLVAG 208
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 37.4 bits (85), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 65
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 66 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 116
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 117 EIVSALEYLHGK-GIIHRDLKPENILL 142
Score = 35.4 bits (80), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 140 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 199
Query: 352 ICFELATG 359
I ++L G
Sbjct: 200 IIYQLVAG 207
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 89
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 90 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 140
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 141 EIVSALEYLHGK-GIIHRDLKPENILL 166
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNACWT-----YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A + + + T QY PE+L +DLW+ C
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 223
Query: 352 ICFELATG 359
I ++L G
Sbjct: 224 IIYQLVAG 231
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADY 143
AL+E +IL+++ + + VV L ++ +C+V + G +L I +
Sbjct: 231 ALNEKQILEKV------NSRFVVSL----AYAYETKDALCLVLTLMNGGDLKFHIYHMGQ 280
Query: 144 RGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
G P I GL+ LHRE I++ DLKPEN+LL
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILL 319
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 324 IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
+ T Y PEV+ +Y+ D W+ C+ +E+ G F
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 37.0 bits (84), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 103 LVKLEYSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 103 LVKLEYSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 86
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 87 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 137
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 138 EIVSALEYLHGK-GIIHRDLKPENILL 163
Score = 35.8 bits (81), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 352 ICFELATG 359
I ++L G
Sbjct: 221 IIYQLVAG 228
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 89 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 139
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 140 EIVSALEYLHGK-GIIHRDLKPENILL 165
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAXKSSDLWALGC 222
Query: 352 ICFELATG 359
I ++L G
Sbjct: 223 IIYQLVAG 230
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 103 LVKLEYSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 86
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 87 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 137
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 138 EIVSALEYLHGK-GIIHRDLKPENILL 163
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 352 ICFELATG 359
I ++L G
Sbjct: 221 IIYQLVAG 228
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 37.0 bits (84), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 89
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 90 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 140
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 141 EIVSALEYLHGK-GIIHRDLKPENILL 166
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 164 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 223
Query: 352 ICFELATG 359
I ++L G
Sbjct: 224 IIYQLVAG 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 91
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 92 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 142
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 143 EIVSALEYLHGK-GIIHRDLKPENILL 168
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 166 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 225
Query: 352 ICFELATG 359
I ++L G
Sbjct: 226 IIYQLVAG 233
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 103
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 104 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 158 LH-SLDLIYRDLKPENLLI 175
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 37.0 bits (84), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 89 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 139
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 140 EIVSALEYLHGK-GIIHRDLKPENILL 165
Score = 35.8 bits (81), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 352 ICFELATG 359
I ++L G
Sbjct: 223 IIYQLVAG 230
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 63
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI------C--FH---I 158
LDH P + F+ E L + YA G L +++I C F+ I
Sbjct: 64 LDH-----PFFVKLYFTFQD-DEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEI 116
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
+ L++LH + IIH DLKPEN+LL
Sbjct: 117 VSALEYLHGK-GIIHRDLKPENILL 140
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 138 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 197
Query: 352 ICFELATG 359
I ++L G
Sbjct: 198 IIYQLVAG 205
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 44/145 (30%), Positives = 65/145 (44%), Gaps = 30/145 (20%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI-----------CFHI 158
LDH P + F+ E L + YA G L +++I I
Sbjct: 89 LDH-----PFFVKLYFTFQD-DEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEI 141
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
+ L++LH + IIH DLKPEN+LL
Sbjct: 142 VSALEYLHGK-GIIHRDLKPENILL 165
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 352 ICFELATG 359
I ++L G
Sbjct: 223 IIYQLVAG 230
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 86
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 87 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 137
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 138 EIVSALEYLHGK-GIIHRDLKPENILL 163
Score = 35.8 bits (81), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 352 ICFELATG 359
I ++L G
Sbjct: 221 IIYQLVAG 228
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 302 DLKCKLVDFGNACWT---YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
+L+ K++DFG A + T Y PE+L + Y DLWS I + + +
Sbjct: 145 NLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGYDESCDLWSLGVILYTMLS 204
Query: 359 GDVLFDPH 366
G V F H
Sbjct: 205 GQVPFQSH 212
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 36/136 (26%), Positives = 61/136 (44%), Gaps = 17/136 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVK 108
LG G FS +++ A+K+ K + T+ + +K+ EG P+ +VK
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANTQKEITALKL----CEGHPN----IVK 70
Query: 109 LLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHR 167
L + F + H +V E L G L IK + I ++ + H+H
Sbjct: 71 LHEVFH----DQLHTFLVMELLNGGELFERIKKKKHFSET--EASYIMRKLVSAVSHMH- 123
Query: 168 ELSIIHTDLKPENVLL 183
++ ++H DLKPEN+L
Sbjct: 124 DVGVVHRDLKPENLLF 139
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 64
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI------C--FH---I 158
LDH P + F+ E L + YA G L +++I C F+ I
Sbjct: 65 LDH-----PFFVKLYFTFQD-DEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEI 117
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
+ L++LH + IIH DLKPEN+LL
Sbjct: 118 VSALEYLHGK-GIIHRDLKPENILL 141
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 139 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 198
Query: 352 ICFELATG 359
I ++L G
Sbjct: 199 IIYQLVAG 206
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 123
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 124 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 177
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 178 LH-SLDLIYRDLKPENLLI 195
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 201 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.0 bits (84), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 89 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 139
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 140 EIVSALEYLHGK-GIIHRDLKPENILL 165
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 352 ICFELATG 359
I ++L G
Sbjct: 223 IIYQLVAG 230
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 61/175 (34%), Gaps = 57/175 (32%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 143 LLLGSNGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 199
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHI 412
C+E G F+ H+ Y + R I
Sbjct: 200 CYEFLVGMPPFEAHT------------------------------YQETY-------RRI 222
Query: 413 RRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
R+ F +P DF + A D+ L L +R T A+ L HPWI
Sbjct: 223 SRVEFTFP---------DFVTEGARDLISRL---LKHNASQRLTLAEVLEHPWIK 265
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV Q E A E ++ +++ +++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L ++ + R + E+ L +
Sbjct: 78 YGYFH----DATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT--YITELA----NALSY 127
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 128 CHSK-RVIHRDIKPENLLLGS 147
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 103
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 104 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 158 LH-SLDLIYRDLKPENLLI 175
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 37.0 bits (84), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT---EAALDEIKILKQIAEGDP 100
Y V +G G F V L T A+K+ + A E + + A
Sbjct: 71 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA---- 126
Query: 101 DDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHIL 159
+ VV+L F+ + +++ MV EY+ G +L+ L+ D VP + ++
Sbjct: 127 -NSPWVVQLFYAFQ----DDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVV 178
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
+ LD +H + IH D+KP+N+LL
Sbjct: 179 LALDAIH-SMGFIHRDVKPDNMLL 201
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 112 HFKHSGPNGQHVCMVFEYLGENLLTLI-KYADYRGVPLHMVKEICFHILVGLDHLHRELS 170
H+ N ++ M + Y+G +LLTL+ K+ D +P M + +++ +D +H +L
Sbjct: 156 HYAFQDENHLYLVMDY-YVGGDLLTLLSKFED--KLPEDMARFYIGEMVLAIDSIH-QLH 211
Query: 171 IIHTDLKPENVLL 183
+H D+KP+NVLL
Sbjct: 212 YVHRDIKPDNVLL 224
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 37.0 bits (84), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
+G G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G ++ + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 88
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 89 LDH-----PFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 139
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 140 EIVSALEYLHGK-GIIHRDLKPENILL 165
Score = 35.4 bits (80), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 163 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 222
Query: 352 ICFELATG 359
I ++L G
Sbjct: 223 IIYQLVAG 230
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 69/139 (49%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
+G G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G ++ + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYMPGGDMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 31/100 (31%), Positives = 49/100 (49%), Gaps = 12/100 (12%)
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADY 143
AL+E +IL+++ + + VV L ++ +C+V + G +L I +
Sbjct: 231 ALNEKQILEKV------NSRFVVSLAYAYE----TKDALCLVLTLMNGGDLKFHIYHMGQ 280
Query: 144 RGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
G P I GL+ LHRE I++ DLKPEN+LL
Sbjct: 281 AGFPEARAVFYAAEICCGLEDLHRE-RIVYRDLKPENILL 319
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 12/40 (30%), Positives = 20/40 (50%)
Query: 324 IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
+ T Y PEV+ +Y+ D W+ C+ +E+ G F
Sbjct: 346 VGTVGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPF 385
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 37.0 bits (84), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 103
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 104 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 158 LH-SLDLIYRDLKPENLLI 175
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 103
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 104 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 158 LH-SLDLIYRDLKPENLLI 175
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 64/144 (44%), Gaps = 17/144 (11%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT---EAALDEIKILKQIAEGDP 100
Y V +G G F V L T A+K+ + A E + + A
Sbjct: 76 YEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFA---- 131
Query: 101 DDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHIL 159
+ VV+L F+ + +++ MV EY+ G +L+ L+ D VP + ++
Sbjct: 132 -NSPWVVQLFYAFQ----DDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVV 183
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
+ LD +H + IH D+KP+N+LL
Sbjct: 184 LALDAIH-SMGFIHRDVKPDNMLL 206
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 103
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 104 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 158 LH-SLDLIYRDLKPENLLI 175
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 36.6 bits (83), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 17/102 (16%)
Query: 305 CKLVDFGNACWTYK--QFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL+DFG A +F N T ++ PE++ AD+WS I + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-- 215
Query: 363 FDPHSGD------------NYDRDEDHLALMMELLGMMPRKI 392
P GD +YD DE+ + EL RK+
Sbjct: 216 -SPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKL 256
Score = 32.7 bits (73), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT-------EAALDEIKILKQIA 96
Y + +LG G F+ V + T A K K Q E E+ IL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L D ++ N V ++ E + G L + A +
Sbjct: 74 HHN------VITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+++LH + I H DLKPEN++L+
Sbjct: 122 KQILDGVNYLHTK-KIAHFDLKPENIMLL 149
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 36.6 bits (83), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 17/102 (16%)
Query: 305 CKLVDFGNACWTYK--QFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL+DFG A +F N T ++ PE++ AD+WS I + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-- 215
Query: 363 FDPHSGD------------NYDRDEDHLALMMELLGMMPRKI 392
P GD +YD DE+ + EL RK+
Sbjct: 216 -SPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKL 256
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT-------EAALDEIKILKQIA 96
Y + +LG G F+ V + T A K K Q E E+ IL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L D ++ N V ++ E + G L + A +
Sbjct: 74 HHN------VITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+++LH + I H DLKPEN++L+
Sbjct: 122 KQILDGVNYLHTK-KIAHFDLKPENIMLL 149
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 112 HFKHSGPNGQHVCMVFEYLGENLLTLI-KYADYRGVPLHMVKEICFHILVGLDHLHRELS 170
H+ N ++ M + Y+G +LLTL+ K+ D +P M + +++ +D +H +L
Sbjct: 140 HYAFQDENHLYLVMDY-YVGGDLLTLLSKFED--KLPEDMARFYIGEMVLAIDSIH-QLH 195
Query: 171 IIHTDLKPENVLL 183
+H D+KP+NVLL
Sbjct: 196 YVHRDIKPDNVLL 208
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 36.6 bits (83), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 46/147 (31%), Positives = 66/147 (44%), Gaps = 34/147 (23%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 93
Query: 110 LDHFKHSGPNGQHVCMVFE-----YLGENLLT---LIKYADYRGVPLHMVKEIC--FH-- 157
LDH P + F+ Y G + L+KY G E C F+
Sbjct: 94 LDH-----PFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIG----SFDETCTRFYTA 144
Query: 158 -ILVGLDHLHRELSIIHTDLKPENVLL 183
I+ L++LH + IIH DLKPEN+LL
Sbjct: 145 EIVSALEYLHGK-GIIHRDLKPENILL 170
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 168 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 227
Query: 352 ICFELATG 359
I ++L G
Sbjct: 228 IIYQLVAG 235
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 44/79 (55%), Gaps = 9/79 (11%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
VV+L F+ + +++ MV EY+ G +L+ L+ D VP + +++ LD
Sbjct: 136 VVQLFYAFQ----DDRYLYMVMEYMPGGDLVNLMSNYD---VPEKWARFYTAEVVLALDA 188
Query: 165 LHRELSIIHTDLKPENVLL 183
+H + IH D+KP+N+LL
Sbjct: 189 IH-SMGFIHRDVKPDNMLL 206
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 36.6 bits (83), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 75/213 (35%), Gaps = 49/213 (23%)
Query: 302 DLKCKLVDFGNACWTYKQ-FTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
D KL DFG A T + T Y PEVL KY D+WS I + L G
Sbjct: 167 DAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGF 226
Query: 361 VLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPL 420
F ++G + I+ G + RR+R L
Sbjct: 227 PPFYSNTG---------------------QAISPGMK---------------RRIR---L 247
Query: 421 NKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQ 480
+ ++SE + D + +L P +R T Q + HPWIN SM Q
Sbjct: 248 GQYGFPNPEWSEV-SEDAKQLIRLLLKTDPTERLTITQFMNHPWIN-------QSMVVPQ 299
Query: 481 -PQDTGGSISDKNRREKDEREAMEVRVGNIAID 512
P T + + + +E M + + +D
Sbjct: 300 TPLHTARVLQEDKDHWDEVKEEMTSALATMRVD 332
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 36.6 bits (83), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSK--YSTPADLWSFACICFELATGDVL 362
K+ DFG + + + + Q+ PE + + Y+ AD +SFA I + + TG+
Sbjct: 168 AKVADFGTSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 363 FDPHS 367
FD +S
Sbjct: 228 FDEYS 232
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 293 RRKELLAAVDLKCKLVDFGNAC------WTYKQFTNDIQTRQYRCPEVLLGSKYSTPADL 346
R +L +L CK+ DFG A WT +Q ++ PE L +++ +D+
Sbjct: 138 RAANILVGENLVCKVADFGLARLIEDNEWTARQGAKF--PIKWTAPEAALYGRFTIKSDV 195
Query: 347 WSFACICFELAT 358
WSF + EL T
Sbjct: 196 WSFGILLTELTT 207
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 36/143 (25%), Positives = 63/143 (44%), Gaps = 18/143 (12%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
Y + +LG G F V + T K T LD+ + +I+ +
Sbjct: 53 YDILEELGSGAFGVVHRCVEKATGRVFVAKFIN-----TPYPLDKYTVKNEISIMNQLHH 107
Query: 104 KCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYR---GVPLHMVKEICFHIL 159
++ L D F+ + + ++ E+L G L I DY+ ++ +++ C
Sbjct: 108 PKLINLHDAFE----DKYEMVLILEFLSGGELFDRIAAEDYKMSEAEVINYMRQAC---- 159
Query: 160 VGLDHLHRELSIIHTDLKPENVL 182
GL H+H E SI+H D+KPEN++
Sbjct: 160 EGLKHMH-EHSIVHLDIKPENIM 181
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 36.6 bits (83), Expect = 0.037, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 75/213 (35%), Gaps = 49/213 (23%)
Query: 302 DLKCKLVDFGNACWTYKQ-FTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
D KL DFG A T + T Y PEVL KY D+WS I + L G
Sbjct: 148 DAVLKLTDFGFAKETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGF 207
Query: 361 VLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPL 420
F ++G + I+ G + RR+R L
Sbjct: 208 PPFYSNTG---------------------QAISPGMK---------------RRIR---L 228
Query: 421 NKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQ 480
+ ++SE + D + +L P +R T Q + HPWIN SM Q
Sbjct: 229 GQYGFPNPEWSEV-SEDAKQLIRLLLKTDPTERLTITQFMNHPWIN-------QSMVVPQ 280
Query: 481 -PQDTGGSISDKNRREKDEREAMEVRVGNIAID 512
P T + + + +E M + + +D
Sbjct: 281 TPLHTARVLQEDKDHWDEVKEEMTSALATMRVD 313
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 17/102 (16%)
Query: 305 CKLVDFGNACWTYK--QFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL+DFG A +F N T ++ PE++ AD+WS I + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-- 215
Query: 363 FDPHSGD------------NYDRDEDHLALMMELLGMMPRKI 392
P GD +YD DE+ + EL RK+
Sbjct: 216 -SPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKL 256
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT-------EAALDEIKILKQIA 96
Y + +LG G F+ V + T A K K Q E E+ IL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L D ++ N V ++ E + G L + A +
Sbjct: 74 HHN------VITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+++LH + I H DLKPEN++L+
Sbjct: 122 KQILDGVNYLHTK-KIAHFDLKPENIMLL 149
>pdb|2V62|A Chain A, Structure Of Vaccinia-Related Kinase 2
pdb|2V62|B Chain B, Structure Of Vaccinia-Related Kinase 2
Length = 345
Score = 36.6 bits (83), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 46/177 (25%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 19 DEGTED--YRRGGYHAVRMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQK 76
D GTE+ ++ + ++ D + ++V+ K+G G F ++LA+ T A V K
Sbjct: 12 DLGTENLYFQSMPFPEGKVLDDMEGNQWVLGKKIGSGGFGLIYLAFPTNKPEKDARHVVK 71
Query: 77 SAQHYTEAALDEIKILKQIAEGDPDDKKCVVKLLDH-----FKHSG----PNGQHVCMVF 127
E+K +++A+ D K K LD+ F SG + MV
Sbjct: 72 VEYQENGPLFSELKFYQRVAKKDCIKKWIERKQLDYLGIPLFYGSGLTEFKGRSYRFMVM 131
Query: 128 EYLGENLLTLIKYADYRGV-PLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
E LG + L K + G V ++ +L L+++H E +H D+K N+LL
Sbjct: 132 ERLG---IDLQKISGQNGTFKKSTVLQLGIRMLDVLEYIH-ENEYVHGDIKAANLLL 184
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 36.6 bits (83), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 95
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 96 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 149
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 150 LH-SLDLIYRDLKPENLLI 167
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 173 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 36.6 bits (83), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 85
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI------C--FH---I 158
LDH P + F+ E L + YA G L +++I C F+ I
Sbjct: 86 LDH-----PFFVKLYFTFQD-DEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
+ L++LH + IIH DLKPEN+LL
Sbjct: 139 VSALEYLHGK-GIIHRDLKPENILL 162
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNACWT-----YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A + + + T QY PE+L +DLW+ C
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSACKSSDLWALGC 219
Query: 352 ICFELATG 359
I ++L G
Sbjct: 220 IIYQLVAG 227
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 36.6 bits (83), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 103
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 104 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 158 LH-SLDLIYRDLKPENLLI 175
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 36.2 bits (82), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 17/102 (16%)
Query: 305 CKLVDFGNACWTYK--QFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL+DFG A +F N T ++ PE++ AD+WS I + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-- 215
Query: 363 FDPHSGD------------NYDRDEDHLALMMELLGMMPRKI 392
P GD +YD DE+ + EL RK+
Sbjct: 216 -SPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKL 256
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT-------EAALDEIKILKQIA 96
Y + +LG G F+ V + T A K K Q E E+ IL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L D ++ N V ++ E + G L + A +
Sbjct: 74 HHN------VITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+++LH + I H DLKPEN++L+
Sbjct: 122 KQILDGVNYLHTK-KIAHFDLKPENIMLL 149
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ GL+HLH+ +II+ DLKPENVLL
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLL 322
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ GL+HLH+ +II+ DLKPENVLL
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLL 322
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ GL+HLH+ +II+ DLKPENVLL
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLL 322
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 17/27 (62%), Positives = 22/27 (81%), Gaps = 1/27 (3%)
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ GL+HLH+ +II+ DLKPENVLL
Sbjct: 297 QIVSGLEHLHQR-NIIYRDLKPENVLL 322
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 36.2 bits (82), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 88
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 89 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 142
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 143 LH-SLDLIYRDLKPENLLI 160
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 166 IQVTDFGFAKRVKGRTWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 220
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 36.2 bits (82), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 70
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI------C--FH---I 158
LDH P + F+ E L + YA G L +++I C F+ I
Sbjct: 71 LDH-----PFFVKLYFTFQD-DEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEI 123
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
+ L++LH + IIH DLKPEN+LL
Sbjct: 124 VSALEYLHGK-GIIHRDLKPENILL 147
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 145 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 204
Query: 352 ICFELATG 359
I ++L G
Sbjct: 205 IIYQLVAG 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 15/38 (39%), Positives = 23/38 (60%)
Query: 146 VPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+P ++ +I + L+HL L IIH D+KP N+LL
Sbjct: 122 IPEEILGKITLATVKALNHLKENLKIIHRDIKPSNILL 159
Score = 30.0 bits (66), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 26/60 (43%), Gaps = 6/60 (10%)
Query: 306 KLVDFGNACWTYKQF--TNDIQTRQYRCPEVLLGSK----YSTPADLWSFACICFELATG 359
KL DFG + T D R Y PE + S Y +D+WS +ELATG
Sbjct: 166 KLCDFGISGQLVDSIAKTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATG 225
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 36.2 bits (82), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQ-----TRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
D+ K+ DFG A T +F + + T Y PEVL +S D+WS CI + L
Sbjct: 178 DMDVKIGDFGLA--TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 357 ATGDVLFD 364
G F+
Sbjct: 236 LVGKPPFE 243
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQ-----TRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
D+ K+ DFG A T +F + + T Y PEVL +S D+WS CI + L
Sbjct: 178 DMDVKIGDFGLA--TKIEFDGERKKXLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 357 ATGDVLFD 364
G F+
Sbjct: 236 LVGKPPFE 243
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 68/145 (46%), Gaps = 30/145 (20%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FSTV LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 85
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI------C--FH---I 158
LDH P + F+ E L + YA G L +++I C F+ I
Sbjct: 86 LDH-----PFFVKLYFTFQD-DEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEI 138
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
+ L++LH + IIH DLKPEN+LL
Sbjct: 139 VSALEYLHGK-GIIHRDLKPENILL 162
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNACWTY---KQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 160 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 219
Query: 352 ICFELATG 359
I ++L G
Sbjct: 220 IIYQLVAG 227
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 36.2 bits (82), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q +ALKV AQ E A E ++ +++ +++L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 70
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L K+ + R + E+ L +
Sbjct: 71 YGYFH----DATRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 120
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 121 CHSK-RVIHRDIKPENLLLGS 140
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 42/175 (24%), Positives = 58/175 (33%), Gaps = 57/175 (32%)
Query: 297 LLAAVDLKCKLVDFGNACWTY----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
LL + K+ DFG W+ + T T Y PE++ G + DLWS +
Sbjct: 136 LLLGSAGELKIADFG---WSVHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVL 192
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHI 412
C+E G P + Y Y R I
Sbjct: 193 CYEFLVGK---PPFEANTYQET-----------------------YKR-----------I 215
Query: 413 RRLRF-WPLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
R+ F +P DF + A D+ L L P +RP + L HPWI
Sbjct: 216 SRVEFTFP---------DFVTEGARDLISRL---LKHNPSQRPMLREVLEHPWIT 258
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQ-----TRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
D+ K+ DFG A T +F + + T Y PEVL +S D+WS CI + L
Sbjct: 178 DMDVKIGDFGLA--TKIEFDGERKKTLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 235
Query: 357 ATGDVLFD 364
G F+
Sbjct: 236 LVGKPPFE 243
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 36.2 bits (82), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 29/102 (28%), Positives = 42/102 (41%), Gaps = 17/102 (16%)
Query: 305 CKLVDFGNACWTYK--QFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL+DFG A +F N T ++ PE++ AD+WS I + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-- 215
Query: 363 FDPHSGD------------NYDRDEDHLALMMELLGMMPRKI 392
P GD +YD DE+ + EL RK+
Sbjct: 216 -SPFLGDTKQETLANITSVSYDFDEEFFSHTSELAKDFIRKL 256
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 62/149 (41%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT-------EAALDEIKILKQIA 96
Y + +LG G F+ V + T A K K Q E E+ IL+Q+
Sbjct: 14 YDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVL 73
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L D ++ N V ++ E + G L + A +
Sbjct: 74 HHN------VITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKESLSEEEATSFI 121
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+++LH + I H DLKPEN++L+
Sbjct: 122 KQILDGVNYLHTK-KIAHFDLKPENIMLL 149
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 36.2 bits (82), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 390 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 446
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 447 VWSFGILLTELTT 459
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 36.2 bits (82), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T + PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 40/167 (23%), Positives = 58/167 (34%), Gaps = 54/167 (32%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T + PEVL Y D+WS + + + TG + P + D E+ LA
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTG---YTPFANGPDDTPEEILA------ 233
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPI 445
R F+ G +W N V ++ D + +
Sbjct: 234 -----------RIGSGKFSLSGG--------YW--NSV-----------SDTAKDLVSKM 261
Query: 446 LDFVPEKRPTAAQCLTHPWI-------------NVGPRLLEPSMAAT 479
L P +R TAA L HPWI P L++ +MAAT
Sbjct: 262 LHVDPHQRLTAALVLRHPWIVHWDQLPQYQLNRQDAPHLVKGAMAAT 308
Score = 30.0 bits (66), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 81/173 (46%), Gaps = 29/173 (16%)
Query: 29 GYHAV-----RMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYT 82
G H++ R F +G Y V+ +G G +S T+ A+K+ KS + T
Sbjct: 5 GVHSIVQQLHRNSIQFTDG-YEVKEDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPT 63
Query: 83 EAALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKY 140
E EI+IL + + P+ ++ L D + +G++V +V E + GE L +++
Sbjct: 64 E----EIEILLRYGQ-HPN----IITLKDVYD----DGKYVYVVTELMKGGELLDKILRQ 110
Query: 141 ADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMSMIDPSKDP 193
+ + F I +++LH + ++H DLKP N+L +D S +P
Sbjct: 111 KFFSE---REASAVLFTITKTVEYLHAQ-GVVHRDLKPSNIL---YVDESGNP 156
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 36.2 bits (82), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
+G G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 157 LH-SLDLIYRDLKPENLLI 174
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 38/86 (44%), Gaps = 14/86 (16%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 132 RSANILVGNGLICKIADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 346 LWSFACICFELAT-GDVLFDPHSGDN 370
+WSF + EL T G V P+ G N
Sbjct: 189 VWSFGILLTELVTKGRV---PYPGMN 211
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 39/139 (28%), Positives = 68/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 95
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY+ G + + ++ P + I++ ++
Sbjct: 96 LVKLEFSFK----DNSNLYMVMEYVPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEY 149
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 150 LH-SLDLIYRDLKPENLLI 167
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 173 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 227
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 36.2 bits (82), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
Y + +G G FS V + +T A+K+ A+ + L + ++ +
Sbjct: 28 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 87
Query: 104 KCVVKLLDHFKHSGPNGQHVCMVFEYL-GENL-LTLIKYADY-----RGVPLHMVKEICF 156
+V+LL+ + G + MVFE++ G +L ++K AD V H +++I
Sbjct: 88 PHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI-- 141
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
L L + H +IIH D+KP VLL S
Sbjct: 142 --LEALRYCHDN-NIIHRDVKPHCVLLAS 167
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 324 IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
+ T + PEV+ Y P D+W I F L +G + F
Sbjct: 196 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 235
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 35.8 bits (81), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +++A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMAAG 234
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 32/68 (47%), Gaps = 7/68 (10%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQ-----TRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
D+ K+ DFG A T +F + + T Y PEVL +S D+WS CI + L
Sbjct: 162 DMDVKIGDFGLA--TKIEFDGERKKDLCGTPNYIAPEVLCKKGHSFEVDIWSLGCILYTL 219
Query: 357 ATGDVLFD 364
G F+
Sbjct: 220 LVGKPPFE 227
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 35.8 bits (81), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 39/138 (28%), Positives = 64/138 (46%), Gaps = 14/138 (10%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVK 108
LG G ++ V A Q A+K+ +K A H E++ L Q +G+ K +++
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQ-CQGN----KNILE 75
Query: 109 LLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHR 167
L++ F+ + +VFE L G ++L I+ + + + LD LH
Sbjct: 76 LIEFFE----DDTRFYLVFEKLQGGSILAHIQKQKH--FNEREASRVVRDVAAALDFLHT 129
Query: 168 ELSIIHTDLKPENVLLMS 185
+ I H DLKPEN+L S
Sbjct: 130 K-GIAHRDLKPENILCES 146
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 36/172 (20%), Positives = 62/172 (36%), Gaps = 48/172 (27%)
Query: 308 VDFGNAC--WTYKQFTNDIQTRQYRCPEVL-----LGSKYSTPADLWSFACICFELATGD 360
+ N+C T + T + +Y PEV+ + Y DLWS + + + +G
Sbjct: 164 MKLNNSCTPITTPELTTPCGSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGY 223
Query: 361 VLFDPHSGDN--YDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFW 418
F H G + +DR E +L +
Sbjct: 224 PPFVGHCGADCGWDRGEVCRVCQNKLFESIQEG--------------------------- 256
Query: 419 PLNKVLIEKYDFSEKD----ANDMADFLVPILDFVPEKRPTAAQCLTHPWIN 466
KY+F +KD +++ D + +L ++R +AAQ L HPW+
Sbjct: 257 --------KYEFPDKDWAHISSEAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 35.4 bits (80), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+++
Sbjct: 157 LH-SLDLIYRDLKPENLMI 174
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 25/55 (45%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y P ++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+++
Sbjct: 157 LH-SLDLIYRDLKPENLMI 174
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN--------- 100
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
L + S + ++ MV EY G + + ++ P + I++ ++
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+++
Sbjct: 158 LH-SLDLIYRDLKPENLMI 175
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 50 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 97
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 98 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 155
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 156 EYLH-SLDLIYRDLKPENLLI 175
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 48/121 (39%), Gaps = 19/121 (15%)
Query: 305 CKLVDFGNACWTYK--QFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL+DFG A +F N T ++ PE++ AD+WS I + L +G
Sbjct: 158 IKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA-- 215
Query: 363 FDPHSGD------------NYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLR 410
P GD +YD DE+ + EL RK+ + +R LR
Sbjct: 216 -SPFLGDTKQETLANITAVSYDFDEEFFSQTSELAKDFIRKLLV--KETRKRLTIQEALR 272
Query: 411 H 411
H
Sbjct: 273 H 273
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/160 (25%), Positives = 67/160 (41%), Gaps = 25/160 (15%)
Query: 37 DTFKNGR----YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT-------EAA 85
+TFK + Y + +LG G F+ V + T A K K Q E
Sbjct: 3 ETFKQQKVEDFYDIGEELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEI 62
Query: 86 LDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYR 144
E+ IL+Q+ + ++ L D ++ N V ++ E + G L + A
Sbjct: 63 EREVSILRQVLHPN------IITLHDVYE----NRTDVVLILELVSGGELFDFL--AQKE 110
Query: 145 GVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLM 184
+ IL G+++LH + I H DLKPEN++L+
Sbjct: 111 SLSEEEATSFIKQILDGVNYLHTK-KIAHFDLKPENIMLL 149
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 35.8 bits (81), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 103
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY G + + ++ P + I++ ++
Sbjct: 104 LVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+++
Sbjct: 158 LH-SLDLIYRDLKPENLMI 175
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 70 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 117
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 175
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 176 EYLH-SLDLIYRDLKPENLLI 195
Score = 35.0 bits (79), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 27/61 (44%), Gaps = 12/61 (19%)
Query: 305 CKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
++ DFG A WT T +Y PE++L Y+ D W+ + +E+A
Sbjct: 201 IQVTDFGFAKRVKGATWTL------CGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAA 254
Query: 359 G 359
G
Sbjct: 255 G 255
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN--------- 100
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
L + S + ++ MV EY G + + ++ P + I++ ++
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+++
Sbjct: 158 LH-SLDLIYRDLKPENLMI 175
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 35.8 bits (81), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IKVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 35/139 (25%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ +
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVN--------- 100
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
L + S + ++ MV EY G + + ++ P + I++ ++
Sbjct: 101 -FPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+++
Sbjct: 158 LH-SLDLIYRDLKPENLMI 175
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 35.8 bits (81), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 38/86 (44%), Gaps = 10/86 (11%)
Query: 279 NEG-INKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEV 334
N+G I++D K S +L D + KL DFG K+ + T + PEV
Sbjct: 159 NQGVIHRDIKSDS------ILLTSDGRIKLSDFGFCAQVSKEVPKRKXLVGTPYWMAPEV 212
Query: 335 LLGSKYSTPADLWSFACICFELATGD 360
+ Y T D+WS + E+ G+
Sbjct: 213 ISRLPYGTEVDIWSLGIMVIEMIDGE 238
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 59/138 (42%), Gaps = 14/138 (10%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVV 107
K+G G V +A + T VA+K + Q E +E+ I++ + D
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVD----- 106
Query: 108 KLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHR 167
S G + +V E+L LT I + + + +C +L L +LH
Sbjct: 107 -----MYSSYLVGDELWVVMEFLEGGALTDI--VTHTRMNEEQIATVCLSVLRALSYLHN 159
Query: 168 ELSIIHTDLKPENVLLMS 185
+ +IH D+K +++LL S
Sbjct: 160 Q-GVIHRDIKSDSILLTS 176
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 35.8 bits (81), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 181 IKVADFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 235
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 66/139 (47%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +I Q A P
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRI--QQAVNFP----F 103
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY G + + ++ P + I++ ++
Sbjct: 104 LVKLEFSFK----DNSNLYMVLEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 157
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+L+
Sbjct: 158 LH-SLDLIYRDLKPENLLI 175
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L D K+ DFG A YK+ TN ++ PE L Y+ +D+WSF
Sbjct: 220 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 279
Query: 350 ACICFELAT 358
+ +E+ T
Sbjct: 280 GVLLWEIFT 288
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 35.8 bits (81), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 68/149 (45%), Gaps = 16/149 (10%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDK 103
Y + +G G FS V + +T A+K+ A+ + L + ++ +
Sbjct: 26 YELCEVIGKGPFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKH 85
Query: 104 KCVVKLLDHFKHSGPNGQHVCMVFEYL-GENL-LTLIKYADY-----RGVPLHMVKEICF 156
+V+LL+ + G + MVFE++ G +L ++K AD V H +++I
Sbjct: 86 PHIVELLETYSSDG----MLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI-- 139
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
L L + H +IIH D+KP VLL S
Sbjct: 140 --LEALRYCHDN-NIIHRDVKPHCVLLAS 165
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/40 (32%), Positives = 19/40 (47%)
Query: 324 IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
+ T + PEV+ Y P D+W I F L +G + F
Sbjct: 194 VGTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 16/55 (29%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IKVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+++
Sbjct: 157 LH-SLDLIYRDLKPENLMI 174
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L D K+ DFG A YK+ TN ++ PE L Y+ +D+WSF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 350 ACICFELAT 358
+ +E+ T
Sbjct: 239 GVLLWEIFT 247
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L D K+ DFG A YK+ TN ++ PE L Y+ +D+WSF
Sbjct: 171 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 230
Query: 350 ACICFELAT 358
+ +E+ T
Sbjct: 231 GVLLWEIFT 239
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L D K+ DFG A YK+ TN ++ PE L Y+ +D+WSF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 350 ACICFELAT 358
+ +E+ T
Sbjct: 239 GVLLWEIFT 247
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 35.8 bits (81), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 32/68 (47%), Gaps = 5/68 (7%)
Query: 297 LLAAVDLKCKLVDFGNA---CWTYKQFTND--IQTRQYRCPEVLLGSKYSTPADLWSFAC 351
+L D+ ++ DFG A KQ + + T QY PE+L +DLW+ C
Sbjct: 161 ILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSACKSSDLWALGC 220
Query: 352 ICFELATG 359
I ++L G
Sbjct: 221 IIYQLVAG 228
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 30/145 (20%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G FST LA + TS A+K+ L++ I+K+ ++ V+
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKI-----------LEKRHIIKENKVPYVTRERDVMSR 86
Query: 110 LDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEI-----------CFHI 158
LDH P + F+ E L + YA G L +++I I
Sbjct: 87 LDH-----PFFVKLYFTFQD-DEKLYFGLSYAK-NGELLKYIRKIGSFDETCTRFYTAEI 139
Query: 159 LVGLDHLHRELSIIHTDLKPENVLL 183
+ L++LH + IIH DLKPEN+LL
Sbjct: 140 VSALEYLHGK-GIIHRDLKPENILL 163
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L D K+ DFG A YK+ TN ++ PE L Y+ +D+WSF
Sbjct: 168 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 227
Query: 350 ACICFELAT 358
+ +E+ T
Sbjct: 228 GVLLWEIFT 236
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 36 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 83
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 84 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 141
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 142 EYLH-SLDLIYRDLKPENLLI 161
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 167 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 221
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + + +ALKV AQ E A E ++ +++ +++L
Sbjct: 16 LGKGKFGNVYLAREKNSKFILALKVLFKAQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 73
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F S V ++ EY LG L L K+ + R + E+ L +
Sbjct: 74 YGYFHDS----TRVYLILEYAPLGTVYRELQKLSKFDEQRTAT--YITELA----NALSY 123
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 124 CHSK-KVIHRDIKPENLLLGS 143
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 48/144 (33%), Gaps = 52/144 (36%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS-GDNYDRDEDHLALMMEL 384
T Y PE++ G + DLWS +C+E G F+ ++ D Y R
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEANTYQDTYKR----------- 217
Query: 385 LGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRF-WPLNKVLIEKYDFSEKDANDMADFLV 443
I R+ F +P DF + A D+ L
Sbjct: 218 ---------------------------ISRVEFTFP---------DFVTEGARDLISRL- 240
Query: 444 PILDFVPEKRPTAAQCLTHPWINV 467
L P +RP + L HPWI
Sbjct: 241 --LKHNPSQRPMLREVLEHPWITA 262
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 35.4 bits (80), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L D K+ DFG A YK+ TN ++ PE L Y+ +D+WSF
Sbjct: 172 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 231
Query: 350 ACICFELAT 358
+ +E+ T
Sbjct: 232 GVLLWEIFT 240
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 35.4 bits (80), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 307 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 364 VWSFGILLTELTT 376
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N YK+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 35.4 bits (80), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 8/71 (11%)
Query: 295 KELLAAVDLKCKLVDFG-------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLW 347
+ +L +L CK+ DFG + TY I R + PE + K+++ +D+W
Sbjct: 176 RNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIR-WTAPEAISYRKFTSASDVW 234
Query: 348 SFACICFELAT 358
SF + +E+ T
Sbjct: 235 SFGIVMWEVMT 245
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 70 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 117
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 118 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIVLTF 175
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 176 EYLH-SLDLIYRDLKPENLLI 195
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 201 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 255
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N YK+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 20/72 (27%), Positives = 33/72 (45%), Gaps = 1/72 (1%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + + K+ DFG + + + T Y PE++ G + DLWS +C+E
Sbjct: 143 LLLGSNGELKIADFGWSVHAPSSRRDTLCGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYE 202
Query: 356 LATGDVLFDPHS 367
G F+ H+
Sbjct: 203 FLVGMPPFEAHT 214
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 65/141 (46%), Gaps = 18/141 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q+ +ALKV Q E A E ++ +++ +++L
Sbjct: 20 LGKGKFGNVYLARERQSKFILALKVLFKTQ--LEKAGVEHQLRREVEIQSHLRHPNILRL 77
Query: 110 LDHFKHSGPNGQHVCMVFEY--LG---ENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+F + V ++ EY LG L L ++ + R + E+ L +
Sbjct: 78 YGYFH----DATRVYLILEYAPLGTVYRELQKLSRFDEQRTAT--YITELA----NALSY 127
Query: 165 LHRELSIIHTDLKPENVLLMS 185
H + +IH D+KPEN+LL S
Sbjct: 128 CHSK-RVIHRDIKPENLLLGS 147
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 35.4 bits (80), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 23/74 (31%), Positives = 34/74 (45%), Gaps = 4/74 (5%)
Query: 304 KCKLVDFG--NACWTYKQFTNDIQTRQYRCPEVLLGSKY-STPADLWSFACICFELATGD 360
+ K+ DFG A + Q + + T Y PEVLL +Y AD+WS + + G
Sbjct: 155 RLKIADFGYSKASVLHSQPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGA 214
Query: 361 VLF-DPHSGDNYDR 373
F DP N+ +
Sbjct: 215 YPFEDPEEPKNFRK 228
Score = 29.3 bits (64), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 38/158 (24%), Positives = 61/158 (38%), Gaps = 28/158 (17%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDD 102
RY + +G G+F L D Q + VA+K + + E EI + + +
Sbjct: 20 RYELVKDIGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPN--- 76
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEY-----LGENLLTLIKYADYRGVPLHMVKEICFH 157
+ FK H+ +V EY L E + ++++ F
Sbjct: 77 -------IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA-------RFFFQ 122
Query: 158 ILV-GLDHLHRELSIIHTDLKPENVLLMSMIDPSKDPR 194
L+ G+ + H + + H DLK EN LL D S PR
Sbjct: 123 QLISGVSYAH-AMQVAHRDLKLENTLL----DGSPAPR 155
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 198 VWSFGILLTELTT 210
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N YK+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 198 VWSFGILLTELTT 210
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N YK+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 307 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 364 VWSFGILLTELTT 376
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 33/65 (50%), Gaps = 2/65 (3%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSK--YSTPADLWSFACICFELATGDVL 362
K+ DFG + + + + Q+ PE + + Y+ AD +SFA I + + TG+
Sbjct: 168 AKVADFGLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 363 FDPHS 367
FD +S
Sbjct: 228 FDEYS 232
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 155 EYLH-SLDLIYRDLKPENLLI 174
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 35.4 bits (80), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L D K+ DFG A YK+ TN ++ PE L Y+ +D+WSF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 350 ACICFELAT 358
+ +E+ T
Sbjct: 239 GVLLWEIFT 247
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 307 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 363
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 364 VWSFGILLTELTT 376
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 35.4 bits (80), Expect = 0.084, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N YK+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 197 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 198 VWSFGILLTELTT 210
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 35.4 bits (80), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 198 VWSFGILLTELTT 210
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 44 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 91
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 92 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP--HARFYAAQIVLTF 149
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+L+
Sbjct: 150 EYLH-SLDLIYRDLKPENLLI 169
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 175 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 229
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 302 DLKCKLVDFGNAC---WTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
DL+ K+ DFG A + ++ T Y PEVL +S D+WS CI + L
Sbjct: 157 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 216
Query: 359 GDVLFD 364
G F+
Sbjct: 217 GKPPFE 222
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 35.4 bits (80), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+++
Sbjct: 157 LH-SLDLIYRDLKPENLMI 174
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 35.4 bits (80), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 302 DLKCKLVDFGNAC---WTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
DL+ K+ DFG A + ++ T Y PEVL +S D+WS CI + L
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 359 GDVLFD 364
G F+
Sbjct: 213 GKPPFE 218
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 35.0 bits (79), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L D K+ DFG A YK+ TN ++ PE L Y+ +D+WSF
Sbjct: 164 RNVLVTEDNVMKIADFGLARDIHHIDYYKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 223
Query: 350 ACICFELAT 358
+ +E+ T
Sbjct: 224 GVLLWEIFT 232
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 35.0 bits (79), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 38/141 (26%), Positives = 66/141 (46%), Gaps = 22/141 (15%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKI--LKQIAEGDPDDKKCV- 106
LG G F V L +K ++S HY LD+ K+ LKQI E ++K+ +
Sbjct: 49 LGTGSFGRVML-----------VKHKESGNHYAMKILDKQKVVKLKQI-EHTLNEKRILQ 96
Query: 107 ---VKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
L + S + ++ MV EY+ G + + ++ P + I++
Sbjct: 97 AVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP--HARFYAAQIVLTF 154
Query: 163 DHLHRELSIIHTDLKPENVLL 183
++LH L +I+ DLKPEN+++
Sbjct: 155 EYLH-SLDLIYRDLKPENLII 174
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 14/55 (25%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE+++ Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGFAKRVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 35.0 bits (79), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 3/66 (4%)
Query: 302 DLKCKLVDFGNAC---WTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
DL+ K+ DFG A + ++ T Y PEVL +S D+WS CI + L
Sbjct: 153 DLEVKIGDFGLATKVEYDGERKKTLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTLLV 212
Query: 359 GDVLFD 364
G F+
Sbjct: 213 GKPPFE 218
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 35.0 bits (79), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N YK+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 243 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 300
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 35.0 bits (79), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 138 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 194
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 195 VWSFGILLTELTT 207
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 35.0 bits (79), Expect = 0.100, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N YK+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 189 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 246
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 132 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 188
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 189 VWSFGILLTELTT 201
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N YK+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 186 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 243
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQ-----TRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
DL+ K+ DFG A T ++ + + T Y PEVL +S D+WS CI + L
Sbjct: 177 DLEVKIGDFGLA--TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 234
Query: 357 ATGDVLFD 364
G F+
Sbjct: 235 LVGKPPFE 242
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 134 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 190
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 191 VWSFGILLTELTT 203
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 35.0 bits (79), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 131 RAANILVGENLVCKVADFGLARLIED---NEXTARQGAKFPIKWTAPEAALYGRFTIKSD 187
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 188 VWSFGILLTELTT 200
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 130 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 186
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 187 VWSFGILLTELTT 199
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 198 VWSFGILLTELTT 210
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 67/139 (48%), Gaps = 18/139 (12%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKV---QKSAQ-HYTEAALDEIKILKQIAEGDPDDKKC 105
LG G F V L +T ++ A+K+ QK + E L+E +IL+ + +
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAV------NFPF 102
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+VKL FK + ++ MV EY G + + ++ P + I++ ++
Sbjct: 103 LVKLEFSFK----DNSNLYMVMEYAPGGEMFSHLRRIGRFSEP--HARFYAAQIVLTFEY 156
Query: 165 LHRELSIIHTDLKPENVLL 183
LH L +I+ DLKPEN+++
Sbjct: 157 LH-SLDLIYRDLKPENLMI 174
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 15/55 (27%), Positives = 26/55 (47%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
++ DFG A + T +Y PE++L Y+ D W+ + +E+A G
Sbjct: 180 IQVTDFGLAKRVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAG 234
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 198 VWSFGILLTELTT 210
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N YK+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 184 KIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 241
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N YK TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 197 KIADFGLARDINNIDYYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG A N+ RQ + PE L +++ +D
Sbjct: 141 RAANILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 197
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 198 VWSFGILLTELTT 210
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 11 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 63
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 64 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 119 VYLH-GIGITHRDIKPENLLL 138
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLH-GIGITHRDIKPENLLL 137
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 12/143 (8%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKILKQIAEGDPDD 102
Y + +LG G F V + T + A K V + E EI+ + +
Sbjct: 53 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH----- 107
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+V L D F+ + + M++E++ L ++ + E + GL
Sbjct: 108 -PTLVNLHDAFE----DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 162
Query: 163 DHLHRELSIIHTDLKPENVLLMS 185
H+H E + +H DLKPEN++ +
Sbjct: 163 CHMH-ENNYVHLDLKPENIMFTT 184
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 56/167 (33%), Gaps = 46/167 (27%)
Query: 304 KCKLVDFG-NACWTYKQFTN-DIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDV 361
+ KL+DFG A KQ T ++ PEV G D+WS + + L +G
Sbjct: 189 ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG-- 246
Query: 362 LFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLN 421
P G+N D LR+++ W ++
Sbjct: 247 -LSPFGGENDDE----------------------------------TLRNVKSCD-WNMD 270
Query: 422 KVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVG 468
+ D DF+ +L P R T Q L HPW+ G
Sbjct: 271 DSAFSGI------SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 311
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 35.0 bits (79), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/77 (27%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
Query: 297 LLAAVDLKCKLVDFGNACWT---YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACIC 353
LL ++ K+ DFG A +++ T Y PE+ S + +D+WS C+
Sbjct: 143 LLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPNYISPEIATRSAHGLESDVWSLGCMF 202
Query: 354 FELATGDVLFDPHSGDN 370
+ L G FD + N
Sbjct: 203 YTLLIGRPPFDTDTVKN 219
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 62/184 (33%), Gaps = 64/184 (34%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQDTGGS 487
DF+ +L P+KR T L HPWI +P+DT +
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWI--------------KPKDTQQA 283
Query: 488 ISDK 491
+S K
Sbjct: 284 LSRK 287
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 73 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 120
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 121 KQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQ-----TRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
DL+ K+ DFG A T ++ + + T Y PEVL +S D+WS CI + L
Sbjct: 175 DLEVKIGDFGLA--TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 232
Query: 357 ATGDVLFD 364
G F+
Sbjct: 233 LVGKPPFE 240
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 35.0 bits (79), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 62/184 (33%), Gaps = 64/184 (34%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQDTGGS 487
DF+ +L P+KR T L HPWI +P+DT +
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWI--------------KPKDTQQA 283
Query: 488 ISDK 491
+S K
Sbjct: 284 LSRK 287
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 73 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 120
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 121 KQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 46/215 (21%), Positives = 72/215 (33%), Gaps = 60/215 (27%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLF 363
KL DFG A T + T T Y PEVL KY D WS I + L G +
Sbjct: 204 KLTDFGFAKETTSHNSLTTPCYTPYYVAPEVLGPEKYDKSCDXWSLGVIXYILLCG---Y 260
Query: 364 DPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKV 423
P F++ HG L P K
Sbjct: 261 PP------------------------------------FYSNHG-------LAISPGXKT 277
Query: 424 LIE--KYDFSEKDANDMAD----FLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMA 477
I +Y+F + +++++ + +L P +R T + HPWI + +
Sbjct: 278 RIRXGQYEFPNPEWSEVSEEVKXLIRNLLKTEPTQRXTITEFXNHPWIX------QSTKV 331
Query: 478 ATQPQDTGGSISDKNRREKDEREAMEVRVGNIAID 512
P T + + R +D +E + + +D
Sbjct: 332 PQTPLHTSRVLKEDKERWEDVKEEXTSALATMRVD 366
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 62/184 (33%), Gaps = 64/184 (34%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQDTGGS 487
DF+ +L P+KR T L HPWI +P+DT +
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWI--------------KPKDTQQA 283
Query: 488 ISDK 491
+S K
Sbjct: 284 LSRK 287
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 73 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 120
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 121 KQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 15/64 (23%)
Query: 306 KLVDFG--------NACWTYKQFTNDIQTRQYRCPEVL-LGSK-YSTPADLWSFACICFE 355
K+ DFG N C + FT T QY PE++ G + Y AD+WS C E
Sbjct: 163 KISDFGTSKRLAGINPCT--ETFTG---TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 217
Query: 356 LATG 359
+ATG
Sbjct: 218 MATG 221
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 40 KNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKILKQIAEG 98
+NG VV LG G + V+ D +A+K + + Y++ +EI + K +
Sbjct: 23 ENGDRVV---LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH- 78
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKE-ICF 156
K +V+ L F +G + + E + G +L L++ + PL ++ I F
Sbjct: 79 -----KNIVQYLGSFSENG----FIKIFMEQVPGGSLSALLRS---KWGPLKDNEQTIGF 126
Query: 157 H---ILVGLDHLHRELSIIHTDLKPENVLL 183
+ IL GL +LH I+H D+K +NVL+
Sbjct: 127 YTKQILEGLKYLHDN-QIVHRDIKGDNVLI 155
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLH-GIGITHRDIKPENLLL 137
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLH-GIGITHRDIKPENLLL 137
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 27/63 (42%), Gaps = 9/63 (14%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
V+ AC I T Y PE+ Y+ +D+W+ C+ +EL T F+ S
Sbjct: 179 VELARAC---------IGTPYYLSPEICENKPYNNKSDIWALGCVLYELCTLKHAFEAGS 229
Query: 368 GDN 370
N
Sbjct: 230 MKN 232
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 295 KELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCP------EVLLGSKYSTPADLWS 348
+ +L A K K+ DFG + Y++ + ++ Q R P E L Y+T +D+WS
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEE-DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWS 237
Query: 349 FACICFELAT 358
F + +E+ T
Sbjct: 238 FGVLLWEIVT 247
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 295 KELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCP------EVLLGSKYSTPADLWS 348
+ +L A K K+ DFG + Y++ + ++ Q R P E L Y+T +D+WS
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEE-DSXVKRSQGRIPVKWMAIESLFDHIYTTQSDVWS 237
Query: 349 FACICFELAT 358
F + +E+ T
Sbjct: 238 FGVLLWEIVT 247
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 33/143 (23%), Positives = 59/143 (41%), Gaps = 12/143 (8%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKILKQIAEGDPDD 102
Y + +LG G F V + T + A K V + E EI+ + +
Sbjct: 159 YDIHEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRH----- 213
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+V L D F+ + + M++E++ L ++ + E + GL
Sbjct: 214 -PTLVNLHDAFE----DDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQVCKGL 268
Query: 163 DHLHRELSIIHTDLKPENVLLMS 185
H+H E + +H DLKPEN++ +
Sbjct: 269 CHMH-ENNYVHLDLKPENIMFTT 290
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 56/167 (33%), Gaps = 46/167 (27%)
Query: 304 KCKLVDFG-NACWTYKQFTN-DIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDV 361
+ KL+DFG A KQ T ++ PEV G D+WS + + L +G
Sbjct: 295 ELKLIDFGLTAHLDPKQSVKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSG-- 352
Query: 362 LFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLN 421
P G+N D LR+++ W ++
Sbjct: 353 -LSPFGGENDDE----------------------------------TLRNVKSCD-WNMD 376
Query: 422 KVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVG 468
+ D DF+ +L P R T Q L HPW+ G
Sbjct: 377 DSAFSGI------SEDGKDFIRKLLLADPNTRMTIHQALEHPWLTPG 417
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 31/64 (48%), Gaps = 15/64 (23%)
Query: 306 KLVDFG--------NACWTYKQFTNDIQTRQYRCPEVL-LGSK-YSTPADLWSFACICFE 355
K+ DFG N C + FT T QY PE++ G + Y AD+WS C E
Sbjct: 149 KISDFGTSKRLAGINPCT--ETFTG---TLQYMAPEIIDKGPRGYGKAADIWSLGCTIIE 203
Query: 356 LATG 359
+ATG
Sbjct: 204 MATG 207
Score = 30.0 bits (66), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 41/150 (27%), Positives = 71/150 (47%), Gaps = 23/150 (15%)
Query: 40 KNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALDEIKILKQIAEG 98
+NG VV LG G + V+ D +A+K + + Y++ +EI + K +
Sbjct: 9 ENGDRVV---LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKH- 64
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKE-ICF 156
K +V+ L F +G + + E + G +L L++ + PL ++ I F
Sbjct: 65 -----KNIVQYLGSFSENG----FIKIFMEQVPGGSLSALLRS---KWGPLKDNEQTIGF 112
Query: 157 H---ILVGLDHLHRELSIIHTDLKPENVLL 183
+ IL GL +LH I+H D+K +NVL+
Sbjct: 113 YTKQILEGLKYLHDN-QIVHRDIKGDNVLI 141
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 34.7 bits (78), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 58/112 (51%), Gaps = 19/112 (16%)
Query: 76 KSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLL 135
+ Q EA L E+ IL++++ G P+ +++L D ++ + F +L +L+
Sbjct: 48 EEVQELREATLKEVDILRKVS-GHPN----IIQLKDTYETN---------TFFFLVFDLM 93
Query: 136 TLIKYADYRGVPLHM----VKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ DY + + ++I +L + LH+ L+I+H DLKPEN+LL
Sbjct: 94 KKGELFDYLTEKVTLSEKETRKIMRALLEVICALHK-LNIVHRDLKPENILL 144
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 11 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKML------N 63
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 64 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 119 VYLHG-IGITHRDIKPENLLL 138
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 11 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 63
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 64 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 119 VYLH-GIGITHRDIKPENLLL 138
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 11 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 63
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 64 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 119 VYLH-GIGITHRDIKPENLLL 138
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 37/147 (25%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQ---HYTEAALDEIKILKQIAEG 98
G Y +Q +G G+F+ V LA T VA+K+ Q + E++I+K +
Sbjct: 15 GNYRLQKTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHP 74
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ +VKL + + + + +V EY GE L+ + + +
Sbjct: 75 N------IVKLFEVIETE----KTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFR 121
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ + + H++ I+H DLK EN+LL
Sbjct: 122 QIVSAVQYCHQKY-IVHRDLKAENLLL 147
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 34.7 bits (78), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 11 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 63
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 64 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 119 VYLH-GIGITHRDIKPENLLL 138
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 62/184 (33%), Gaps = 64/184 (34%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQDTGGS 487
DF+ +L P+KR T L HPWI +P+DT +
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWI--------------KPKDTQQA 283
Query: 488 ISDK 491
+S K
Sbjct: 284 LSRK 287
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 73 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 120
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 121 KQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 34.7 bits (78), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 29/117 (24%)
Query: 76 KSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSG---------PNGQHVCMV 126
+ Q EA L E+ IL++++ G P+ +++L D ++ + G+ +
Sbjct: 61 EEVQELREATLKEVDILRKVS-GHPN----IIQLKDTYETNTFFFLVFDLMKKGE----L 111
Query: 127 FEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
F+YL E + + + R + +++ IC LH+ L+I+H DLKPEN+LL
Sbjct: 112 FDYLTEKVT--LSEKETRKIMRALLEVIC--------ALHK-LNIVHRDLKPENILL 157
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 32/117 (27%), Positives = 59/117 (50%), Gaps = 29/117 (24%)
Query: 76 KSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSG---------PNGQHVCMV 126
+ Q EA L E+ IL++++ G P+ +++L D ++ + G+ +
Sbjct: 61 EEVQELREATLKEVDILRKVS-GHPN----IIQLKDTYETNTFFFLVFDLMKKGE----L 111
Query: 127 FEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
F+YL E + + + R + +++ IC LH+ L+I+H DLKPEN+LL
Sbjct: 112 FDYLTEKVT--LSEKETRKIMRALLEVIC--------ALHK-LNIVHRDLKPENILL 157
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
++ DFG N YK+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 197 RIADFGLARDINNIDYYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 33/68 (48%), Gaps = 7/68 (10%)
Query: 302 DLKCKLVDFGNACWTYKQFTNDIQ-----TRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
DL+ K+ DFG A T ++ + + T Y PEVL +S D+WS CI + L
Sbjct: 151 DLEVKIGDFGLA--TKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFEVDVWSIGCIMYTL 208
Query: 357 ATGDVLFD 364
G F+
Sbjct: 209 LVGKPPFE 216
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 50/175 (28%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 167 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 217
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 218 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 246
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQ 482
DF+ +L P+KR T L HPWI S A + PQ
Sbjct: 247 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 291
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 72 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 119
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 120 KQILNGVYYLH-SLQIAHFDLKPENIMLL 147
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 34.3 bits (77), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 67/158 (42%), Gaps = 26/158 (16%)
Query: 30 YHAV-RMGDTFKNGRYVVQSKLGWGHFSTVWLA---WDTQTSHYVALKVQKSAQHYTEAA 85
Y AV ++ + FK ++ K+G G FS+V+LA +ALK H A
Sbjct: 13 YEAVPQLSNVFK-----IEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIA 67
Query: 86 LDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLG-ENLLTLIKYADYR 144
E++ L G D+ V K+ HV + YL E+ L ++ ++
Sbjct: 68 -AELQCLT--VAGGQDNVMGV-------KYCFRKNDHVVIAMPYLEHESFLDILNSLSFQ 117
Query: 145 GVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVL 182
V+E ++ L +H + I+H D+KP N L
Sbjct: 118 E-----VREYMLNLFKALKRIH-QFGIVHRDVKPSNFL 149
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 50/175 (28%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQ 482
DF+ +L P+KR T L HPWI S A + PQ
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 292
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 13 YDTGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 73 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 120
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 121 KQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 50/175 (28%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQ 482
DF+ +L P+KR T L HPWI S A + PQ
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 292
Score = 32.3 bits (72), Expect = 0.71, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 153 EICFHILVGLDHLHRELSIIHTDLKPENVLLM 184
E IL G+ +LH L I H DLKPEN++L+
Sbjct: 118 EFLKQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 50/175 (28%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQ 482
DF+ +L P+KR T L HPWI S A + PQ
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 292
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 73 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 120
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 121 KQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 50/175 (28%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 167 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 217
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 218 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 246
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQ 482
DF+ +L P+KR T L HPWI S A + PQ
Sbjct: 247 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 291
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 12 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 71
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 72 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 119
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 120 KQILNGVYYLH-SLQIAHFDLKPENIMLL 147
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 38/175 (21%), Positives = 58/175 (33%), Gaps = 50/175 (28%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQ 482
DF+ +L P+KR T L HPWI S A + PQ
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWIKPKDTQQALSSAWSHPQ 292
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 14/98 (14%)
Query: 88 EIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGV 146
E+ ILK+I + V+ L + ++ N V ++ E + G L + A+ +
Sbjct: 64 EVSILKEIQHPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESL 111
Query: 147 PLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLM 184
E IL G+ +LH L I H DLKPEN++L+
Sbjct: 112 TEEEATEFLKQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 34.3 bits (77), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 201 WYAPESLTESKFSVASDVWSFGVVLYELFT 230
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 190 WYAPESLTESKFSVASDVWSFGVVLYELFT 219
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 188 WYAPESLTESKFSVASDVWSFGVVLYELFT 217
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 189 WYAPESLTESKFSVASDVWSFGVVLYELFT 218
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 10/69 (14%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPADLWSF 349
+L +L CK+ DFG A N+ RQ + PE L +++ +D+WSF
Sbjct: 145 ILVGENLVCKVADFGLARLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSDVWSF 201
Query: 350 ACICFELAT 358
+ EL T
Sbjct: 202 GILLTELTT 210
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 214 WYAPESLTESKFSVASDVWSFGVVLYELFT 243
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/32 (53%), Positives = 23/32 (71%), Gaps = 2/32 (6%)
Query: 155 CFH-ILVGLDHLHRELSIIHTDLKPENVLLMS 185
C H IL ++H+H+ I+H DLKPEN+LL S
Sbjct: 135 CIHQILESVNHIHQH-DIVHRDLKPENLLLAS 165
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 58/163 (35%), Gaps = 47/163 (28%)
Query: 306 KLVDFGNACWTY---KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL DFG A + + T Y PEVL Y P D+W+ I + L G
Sbjct: 173 KLADFGLAIEVQGEQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPP 232
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNK 422
F +D D+ L ++ G Y DF +
Sbjct: 233 F-------WDEDQHKLYQQIK-----------AGAY--DFPS------------------ 254
Query: 423 VLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
++D +A ++ + +L P KR TA Q L HPW+
Sbjct: 255 ---PEWDTVTPEAKNLIN---QMLTINPAKRITADQALKHPWV 291
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 187 WYAPESLTESKFSVASDVWSFGVVLYELFT 216
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 182 WYAPESLTESKFSVASDVWSFGVVLYELFT 211
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 184 WYAPESLTESKFSVASDVWSFGVVLYELFT 213
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 60/167 (35%), Gaps = 55/167 (32%)
Query: 306 KLVDFGNACWTYKQFTNDIQ-------TRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
KL DFG A + D Q T Y PEVL Y P D+W+ I + L
Sbjct: 146 KLADFGLAI----EVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLV 201
Query: 359 GDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFW 418
G F +D D+ L ++ G Y DF +
Sbjct: 202 GYPPF-------WDEDQHRLYQQIK-----------AGAY--DFPS-------------- 227
Query: 419 PLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
++D +A D+ + +L P KR TA++ L HPWI
Sbjct: 228 -------PEWDTVTPEAKDLIN---KMLTINPAKRITASEALKHPWI 264
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
IL ++H H I+H DLKPEN+LL S
Sbjct: 111 QILESVNHCHLN-GIVHRDLKPENLLLAS 138
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 34.3 bits (77), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 181 WYAPESLTESKFSVASDVWSFGVVLYELFT 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 183 WYAPESLTESKFSVASDVWSFGVVLYELFT 212
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHY--TEAALDEIKILKQIAEG 98
N +++ LG G + V+ +T A+KV + + + E ++LK++
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL--- 64
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHI 158
+ K +VKL + + + + M F G L + ++ G+P + +
Sbjct: 65 ---NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 159 LVGLDHLHRELSIIHTDLKPENVL 182
+ G++HL RE I+H ++KP N++
Sbjct: 122 VGGMNHL-RENGIVHRNIKPGNIM 144
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 33/79 (41%), Gaps = 10/79 (12%)
Query: 306 KLVDFGNA--CWTYKQFTNDIQTRQYRCPEVLLGS--------KYSTPADLWSFACICFE 355
KL DFG A +QF T +Y P++ + KY DLWS +
Sbjct: 156 KLTDFGAARELEDDEQFVXLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
Query: 356 LATGDVLFDPHSGDNYDRD 374
ATG + F P G +++
Sbjct: 216 AATGSLPFRPFEGPRRNKE 234
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 34.3 bits (77), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 13/30 (43%), Positives = 19/30 (63%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ PE L SK+S +D+WSF + +EL T
Sbjct: 186 WYAPESLTESKFSVASDVWSFGVVLYELFT 215
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG + + ++T+ + ++ ++ PEVL+ SK+S+ +D+W+F + +E+ +
Sbjct: 160 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 9 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 61
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 62 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 116
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 117 VYLH-GIGITHRDIKPENLLL 136
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 34.3 bits (77), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 63/144 (43%), Gaps = 21/144 (14%)
Query: 49 KLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIAEGDPD 101
+LG G F+ V + T Y A ++K + + E+ ILK+I +
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPN-- 75
Query: 102 DKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEICFHILV 160
V+ L + ++ N V ++ E + G L + A+ + E IL
Sbjct: 76 ----VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFLKQILN 125
Query: 161 GLDHLHRELSIIHTDLKPENVLLM 184
G+ +LH L I H DLKPEN++L+
Sbjct: 126 GVYYLH-SLQIAHFDLKPENIMLL 148
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 39/184 (21%), Positives = 61/184 (33%), Gaps = 64/184 (34%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T + PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQDTGGS 487
DF+ +L P+KR T L HPWI +P+DT +
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWI--------------KPKDTQQA 283
Query: 488 ISDK 491
+S K
Sbjct: 284 LSRK 287
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 33.9 bits (76), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L +L CK+ DFG N+ RQ + PE L +++ +D
Sbjct: 308 RAANILVGENLVCKVADFGLGRLIED---NEYTARQGAKFPIKWTAPEAALYGRFTIKSD 364
Query: 346 LWSFACICFELAT 358
+WSF + EL T
Sbjct: 365 VWSFGILLTELTT 377
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 33.9 bits (76), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 295 KELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQYRCP------EVLLGSKYSTPADLWS 348
+ +L A K K+ DFG + Y++ + ++ Q R P E L Y+T +D+WS
Sbjct: 179 RNILVAEGRKMKISDFGLSRDVYEE-DSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWS 237
Query: 349 FACICFELAT 358
F + +E+ T
Sbjct: 238 FGVLLWEIVT 247
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 53/158 (33%), Gaps = 50/158 (31%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
DF+ +L P+KR T L HPWI
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 73 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 120
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 121 KQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 33.9 bits (76), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 34/158 (21%), Positives = 53/158 (33%), Gaps = 50/158 (31%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEK 427
GD +++ A + ++F+ L
Sbjct: 219 GDTKQETLANVS-------------AVNYEFEDEYFSNTSAL------------------ 247
Query: 428 YDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
DF+ +L P+KR T L HPWI
Sbjct: 248 ----------AKDFIRRLLVKDPKKRMTIQDSLQHPWI 275
Score = 33.9 bits (76), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 73 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 120
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 121 KQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLH-GIGITHRDIKPENLLL 137
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 40/71 (56%), Gaps = 5/71 (7%)
Query: 302 DLKCKLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFEL- 356
DL K+ DFG + Q+ + + T+ ++ PEV KYS+ +D+W+F + +E+
Sbjct: 140 DLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKSDVWAFGILMWEVF 199
Query: 357 ATGDVLFDPHS 367
+ G + +D ++
Sbjct: 200 SLGKMPYDLYT 210
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG + + ++T+ + ++ ++ PEVL+ SK+S+ +D+W+F + +E+ +
Sbjct: 151 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 207
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLH-GIGITHRDIKPENLLL 137
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 33.9 bits (76), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG + + ++T+ + ++ ++ PEVL+ SK+S+ +D+W+F + +E+ +
Sbjct: 140 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 196
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 28/63 (44%), Gaps = 9/63 (14%)
Query: 308 VDFGNACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS 367
+DFGN +F N T ++ PE++ AD+WS I + L +G P
Sbjct: 168 IDFGN------EFKNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGA---SPFL 218
Query: 368 GDN 370
GD
Sbjct: 219 GDT 221
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 21/149 (14%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTS-HYVALKVQKSAQHYTEAALD------EIKILKQIA 96
Y +LG G F+ V + T Y A ++K + + E+ ILK+I
Sbjct: 13 YDTGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQ 72
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLIKYADYRGVPLHMVKEIC 155
+ V+ L + ++ N V ++ E + G L + A+ + E
Sbjct: 73 HPN------VITLHEVYE----NKTDVILILELVAGGELFDFL--AEKESLTEEEATEFL 120
Query: 156 FHILVGLDHLHRELSIIHTDLKPENVLLM 184
IL G+ +LH L I H DLKPEN++L+
Sbjct: 121 KQILNGVYYLH-SLQIAHFDLKPENIMLL 148
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLH-GIGITHRDIKPENLLL 137
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG + + ++T+ + ++ ++ PEVL+ SK+S+ +D+W+F + +E+ +
Sbjct: 144 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 200
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 33.9 bits (76), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 41/163 (25%), Positives = 59/163 (36%), Gaps = 47/163 (28%)
Query: 306 KLVDFGNACWTY---KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVL 362
KL DFG A + + T Y PEVL Y P D+W+ I + L G
Sbjct: 146 KLADFGLAIEVQGDQQAWFGFAGTPGYLSPEVLRKDPYGKPVDMWACGVILYILLVGYPP 205
Query: 363 FDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNK 422
F +D D+ L ++ G Y DF +
Sbjct: 206 F-------WDEDQHRLYQQIK-----------AGAY--DFPS------------------ 227
Query: 423 VLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
++D +A D+ + +L P KR TA++ L HPWI
Sbjct: 228 ---PEWDTVTPEAKDLIN---KMLTINPAKRITASEALKHPWI 264
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/29 (51%), Positives = 19/29 (65%), Gaps = 1/29 (3%)
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLLMS 185
IL ++H H I+H DLKPEN+LL S
Sbjct: 111 QILESVNHCHLN-GIVHRDLKPENLLLAS 138
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 37/57 (64%), Gaps = 4/57 (7%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG + + ++T+ + ++ ++ PEVL+ SK+S+ +D+W+F + +E+ +
Sbjct: 145 KVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 33.9 bits (76), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 22/41 (53%)
Query: 316 TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
Y + T + T+ Y PE + G+ YS D++S I FEL
Sbjct: 183 AYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFEL 223
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 33.5 bits (75), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 11 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 63
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 64 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 119 VYLH-GIGITHRDIKPENLLL 138
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 25/49 (51%), Gaps = 1/49 (2%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHS-GDNYDR 373
T Y PE++ G ++ DLW +C+EL G+ F+ S + Y R
Sbjct: 184 TLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNETYRR 232
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 65/146 (44%), Gaps = 17/146 (11%)
Query: 37 DTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIA 96
D F+ GR LG G F V+LA + ++ VALKV +Q E E ++ ++I
Sbjct: 23 DDFEIGR-----PLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGV--EHQLRREIE 75
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEI 154
+++L ++F + + + ++ EY GE L K + + E
Sbjct: 76 IQAHLHHPNILRLYNYFY----DRRRIYLILEYAPRGELYKELQKSCTFDEQRTATIME- 130
Query: 155 CFHILVGLDHLHRELSIIHTDLKPEN 180
+ L + H + +IH D+KPEN
Sbjct: 131 --ELADALMYCHGK-KVIHRDIKPEN 153
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 33.5 bits (75), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 68/196 (34%), Gaps = 56/196 (28%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
KL DFG N + F T Y PEVL YS P D+W+ I + L G
Sbjct: 171 KLADFGLAIEVNDSEAWHGFAG---TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGY 227
Query: 361 VLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPL 420
F +D D+ L ++ G Y +P
Sbjct: 228 PPF-------WDEDQHRLYAQIK-----------AGAYD------------------YP- 250
Query: 421 NKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQ 480
++D +A + D +L P+KR TA Q L PWI R+ +A
Sbjct: 251 ----SPEWDTVTPEAKSLID---SMLTVNPKKRITADQALKVPWICNRERV----ASAIH 299
Query: 481 PQDTGGSISDKNRREK 496
QDT + N R K
Sbjct: 300 RQDTVDCLKKFNARRK 315
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 33.5 bits (75), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 34/79 (43%), Gaps = 10/79 (12%)
Query: 306 KLVDFGNACWTY--KQFTNDIQTRQYRCPEVLLGS--------KYSTPADLWSFACICFE 355
KL DFG A +QF + T +Y P++ + KY DLWS +
Sbjct: 156 KLTDFGAARELEDDEQFVSLYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYH 215
Query: 356 LATGDVLFDPHSGDNYDRD 374
ATG + F P G +++
Sbjct: 216 AATGSLPFRPFEGPRRNKE 234
Score = 32.7 bits (73), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 32/144 (22%), Positives = 66/144 (45%), Gaps = 9/144 (6%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHY--TEAALDEIKILKQIAEG 98
N +++ LG G + V+ +T A+KV + + + E ++LK++
Sbjct: 8 NHLWLLSDILGQGATANVFRGRHKKTGDLFAIKVFNNISFLRPVDVQMREFEVLKKL--- 64
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHI 158
+ K +VKL + + + + M F G L + ++ G+P + +
Sbjct: 65 ---NHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVLEEPSNAYGLPESEFLIVLRDV 121
Query: 159 LVGLDHLHRELSIIHTDLKPENVL 182
+ G++HL RE I+H ++KP N++
Sbjct: 122 VGGMNHL-RENGIVHRNIKPGNIM 144
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 33.5 bits (75), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 18/85 (21%)
Query: 302 DLKCKLVDFGNAC----WT----YKQFTNDIQTRQYRCPEVLL---GSKYSTPADLWSFA 350
DL K+ DFG A W+ ++Q + I + PEV+ + YS +D+++F
Sbjct: 168 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL---WMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 351 CICFELATGDVLFDPHSGDNYDRDE 375
+ +EL TG + P+S N +RD+
Sbjct: 225 IVLYELMTGQL---PYSNIN-NRDQ 245
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 18/85 (21%)
Query: 302 DLKCKLVDFGNAC----WT----YKQFTNDIQTRQYRCPEVLL---GSKYSTPADLWSFA 350
DL K+ DFG A W+ ++Q + I + PEV+ + YS +D+++F
Sbjct: 167 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL---WMAPEVIRMQDKNPYSFQSDVYAFG 223
Query: 351 CICFELATGDVLFDPHSGDNYDRDE 375
+ +EL TG + P+S N +RD+
Sbjct: 224 IVLYELMTGQL---PYSNIN-NRDQ 244
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 18/85 (21%)
Query: 302 DLKCKLVDFGNAC----WT----YKQFTNDIQTRQYRCPEVLL---GSKYSTPADLWSFA 350
DL K+ DFG A W+ ++Q + I + PEV+ + YS +D+++F
Sbjct: 160 DLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL---WMAPEVIRMQDKNPYSFQSDVYAFG 216
Query: 351 CICFELATGDVLFDPHSGDNYDRDE 375
+ +EL TG + P+S N +RD+
Sbjct: 217 IVLYELMTGQL---PYSNIN-NRDQ 237
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 18/85 (21%)
Query: 302 DLKCKLVDFGNAC----WT----YKQFTNDIQTRQYRCPEVLL---GSKYSTPADLWSFA 350
DL K+ DFG A W+ ++Q + I + PEV+ + YS +D+++F
Sbjct: 168 DLTVKIGDFGLATEKSRWSGSHQFEQLSGSIL---WMAPEVIRMQDKNPYSFQSDVYAFG 224
Query: 351 CICFELATGDVLFDPHSGDNYDRDE 375
+ +EL TG + P+S N +RD+
Sbjct: 225 IVLYELMTGQL---PYSNIN-NRDQ 245
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 33.5 bits (75), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLHG-IGITHRDIKPENLLL 137
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLHG-IGITHRDIKPENLLL 137
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 33.5 bits (75), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 44/85 (51%), Gaps = 18/85 (21%)
Query: 302 DLKCKLVDFGNAC----WT----YKQFTNDIQTRQYRCPEVLL---GSKYSTPADLWSFA 350
DL K+ DFG A W+ ++Q + I + PEV+ + YS +D+++F
Sbjct: 142 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSIL---WMAPEVIRMQDKNPYSFQSDVYAFG 198
Query: 351 CICFELATGDVLFDPHSGDNYDRDE 375
+ +EL TG + P+S N +RD+
Sbjct: 199 IVLYELMTGQL---PYSNIN-NRDQ 219
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 33.5 bits (75), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 302 DLKCKLVDFGNAC----WT-YKQFTNDIQTRQYRCPEVLL---GSKYSTPADLWSFACIC 353
DL K+ DFG A W+ QF + + PEV+ + YS +D+++F +
Sbjct: 145 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 354 FELATGDVLFDPHSGDNYDRDE 375
+EL TG + P+S N +RD+
Sbjct: 205 YELMTGQL---PYSNIN-NRDQ 222
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 302 DLKCKLVDFGNAC----WT-YKQFTNDIQTRQYRCPEVLL---GSKYSTPADLWSFACIC 353
DL K+ DFG A W+ QF + + PEV+ + YS +D+++F +
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 354 FELATGDVLFDPHSGDNYDRDE 375
+EL TG + P+S N +RD+
Sbjct: 200 YELMTGQL---PYSNIN-NRDQ 217
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 33.5 bits (75), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 302 DLKCKLVDFGNAC----WT-YKQFTNDIQTRQYRCPEVLL---GSKYSTPADLWSFACIC 353
DL K+ DFG A W+ QF + + PEV+ + YS +D+++F +
Sbjct: 145 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 204
Query: 354 FELATGDVLFDPHSGDNYDRDE 375
+EL TG + P+S N +RD+
Sbjct: 205 YELMTGQL---PYSNIN-NRDQ 222
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 302 DLKCKLVDFGNAC----WT-YKQFTNDIQTRQYRCPEVLL---GSKYSTPADLWSFACIC 353
DL K+ DFG A W+ QF + + PEV+ + YS +D+++F +
Sbjct: 140 DLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 354 FELATGDVLFDPHSGDNYDRDE 375
+EL TG + P+S N +RD+
Sbjct: 200 YELMTGQL---PYSNIN-NRDQ 217
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 201 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 260
Query: 362 LFD 364
F+
Sbjct: 261 PFE 263
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 33.1 bits (74), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 42/82 (51%), Gaps = 12/82 (14%)
Query: 302 DLKCKLVDFGNAC----WT-YKQFTNDIQTRQYRCPEVLL---GSKYSTPADLWSFACIC 353
DL K+ DFG A W+ QF + + PEV+ + YS +D+++F +
Sbjct: 140 DLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVL 199
Query: 354 FELATGDVLFDPHSGDNYDRDE 375
+EL TG + P+S N +RD+
Sbjct: 200 YELMTGQL---PYSNIN-NRDQ 217
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 33.1 bits (74), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 188 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 247
Query: 362 LFD 364
F+
Sbjct: 248 PFE 250
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 298 LAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ A D K+ DFG Y++ + ++ PE L ++T +D+WSF +
Sbjct: 157 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 216
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMME 383
+E+AT + P+ G + +E L +ME
Sbjct: 217 LWEIAT--LAEQPYQGLS---NEQVLRFVME 242
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 298 LAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ A D K+ DFG Y++ + ++ PE L ++T +D+WSF +
Sbjct: 170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 229
Query: 353 CFELAT 358
+E+AT
Sbjct: 230 LWEIAT 235
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 33.1 bits (74), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 176 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 235
Query: 362 LFD 364
F+
Sbjct: 236 PFE 238
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 362 LFD 364
F+
Sbjct: 209 PFE 211
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLHG-IGITHRDIKPENLLL 137
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLHG-IGITHRDIKPENLLL 137
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 33.1 bits (74), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 298 LAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ A D K+ DFG Y++ + ++ PE L ++T +D+WSF +
Sbjct: 192 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 251
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMME 383
+E+AT + P+ G + +E L +ME
Sbjct: 252 LWEIAT--LAEQPYQGLS---NEQVLRFVME 277
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLHG-IGITHRDIKPENLLL 137
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 154 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 362 LFD 364
F+
Sbjct: 214 PFE 216
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 33.1 bits (74), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 65/141 (46%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I K + +
Sbjct: 11 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 63
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 64 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 119 VYLHG-IGITHRDIKPENLLL 138
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 154 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 362 LFD 364
F+
Sbjct: 214 PFE 216
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 298 LAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ A D K+ DFG Y++ + ++ PE L ++T +D+WSF +
Sbjct: 163 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 222
Query: 353 CFELAT 358
+E+AT
Sbjct: 223 LWEIAT 228
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 33.1 bits (74), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 154 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 213
Query: 362 LFD 364
F+
Sbjct: 214 PFE 216
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 298 LAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ A D K+ DFG Y++ + ++ PE L ++T +D+WSF +
Sbjct: 164 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 223
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMME 383
+E+AT + P+ G + +E L +ME
Sbjct: 224 LWEIAT--LAEQPYQGLS---NEQVLRFVME 249
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 298 LAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ A D K+ DFG Y++ + ++ PE L ++T +D+WSF +
Sbjct: 170 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 229
Query: 353 CFELAT 358
+E+AT
Sbjct: 230 LWEIAT 235
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 298 LAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ A D K+ DFG Y++ + ++ PE L ++T +D+WSF +
Sbjct: 161 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 220
Query: 353 CFELAT 358
+E+AT
Sbjct: 221 LWEIAT 226
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 362 LFD 364
F+
Sbjct: 242 PFE 244
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 33.1 bits (74), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 196 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
Query: 362 LFD 364
F+
Sbjct: 256 PFE 258
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFEL 356
K+ DFG + Q+T+ T+ ++ PEV S+YS+ +D+WSF + +E+
Sbjct: 143 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 197
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 362 LFD 364
F+
Sbjct: 242 PFE 244
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/66 (27%), Positives = 32/66 (48%), Gaps = 5/66 (7%)
Query: 298 LAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ A D K+ DFG Y++ + ++ PE L ++T +D+WSF +
Sbjct: 163 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 222
Query: 353 CFELAT 358
+E+AT
Sbjct: 223 LWEIAT 228
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 362 LFD 364
F+
Sbjct: 241 PFE 243
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 153 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
Query: 362 LFD 364
F+
Sbjct: 213 PFE 215
Score = 28.9 bits (63), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 49/97 (50%), Gaps = 11/97 (11%)
Query: 88 EIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRG-V 146
E+ +LK+++ G V++LLD F+ P+ ++ E + E + L + RG +
Sbjct: 61 EVVLLKKVSSG----FSGVIRLLDWFER--PDS--FVLILERM-EPVQDLFDFITERGAL 111
Query: 147 PLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+ + + +L + H H ++H D+K EN+L+
Sbjct: 112 QEELARSFFWQVLEAVRHCH-NCGVLHRDIKDENILI 147
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 362 LFD 364
F+
Sbjct: 241 PFE 243
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 362 LFD 364
F+
Sbjct: 242 PFE 244
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 196 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
Query: 362 LFD 364
F+
Sbjct: 256 PFE 258
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 153 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 212
Query: 362 LFD 364
F+
Sbjct: 213 PFE 215
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 362 LFD 364
F+
Sbjct: 241 PFE 243
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 182 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 241
Query: 362 LFD 364
F+
Sbjct: 242 PFE 244
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 33.1 bits (74), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 181 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 240
Query: 362 LFD 364
F+
Sbjct: 241 PFE 243
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 33.1 bits (74), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 4/55 (7%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFEL 356
K+ DFG + Q+T+ T+ ++ PEV S+YS+ +D+WSF + +E+
Sbjct: 163 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEV 217
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNACWTY-----KQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L D K+ DFG A + K+ TN ++ PE L Y+ +D+WSF
Sbjct: 179 RNVLVTEDNVMKIADFGLARDIHHIDXXKKTTNGRLPVKWMAPEALFDRIYTHQSDVWSF 238
Query: 350 ACICFELAT 358
+ +E+ T
Sbjct: 239 GVLLWEIFT 247
>pdb|2AQV|A Chain A, Crystal Structure Of E. Coli Isoaspartyl Dipeptidase
Mutant Y137f
pdb|2AQV|B Chain B, Crystal Structure Of E. Coli Isoaspartyl Dipeptidase
Mutant Y137f
Length = 390
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 396 GRYSRDFFNRHGDLRHIRRLRFWPL---NKVLIEKYDFSEKDA-----NDMADFL 442
G S+ FF+ G+L HI F L +VL++ YDFS DA + +A FL
Sbjct: 286 GNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFL 340
>pdb|1YBQ|B Chain B, Crystal Structure Of Escherichia Coli Isoaspartyl
Dipeptidase Mutant D285n Complexed With
Beta-Aspartylhistidine
Length = 390
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 396 GRYSRDFFNRHGDLRHIRRLRFWPL---NKVLIEKYDFSEKDA-----NDMADFL 442
G S+ FF+ G+L HI F L +VL++ YDFS DA + +A FL
Sbjct: 286 GNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFL 340
>pdb|1ONW|A Chain A, Crystal Structure Of Isoaspartyl Dipeptidase From E. Coli
pdb|1ONW|B Chain B, Crystal Structure Of Isoaspartyl Dipeptidase From E. Coli
pdb|1ONX|A Chain A, Crystal Structure Of Isoaspartyl Dipeptidase From
Escherichia Coli Complexed With Aspartate
pdb|1ONX|B Chain B, Crystal Structure Of Isoaspartyl Dipeptidase From
Escherichia Coli Complexed With Aspartate
pdb|1PO9|A Chain A, Crytsal Structure Of Isoaspartyl Dipeptidase
pdb|1PO9|B Chain B, Crytsal Structure Of Isoaspartyl Dipeptidase
pdb|1POJ|A Chain A, Isoaspartyl Dipeptidase With Bound Inhibitor
pdb|1POJ|B Chain B, Isoaspartyl Dipeptidase With Bound Inhibitor
pdb|1POK|B Chain B, Crystal Structure Of Isoaspartyl Dipeptidase
pdb|1POK|A Chain A, Crystal Structure Of Isoaspartyl Dipeptidase
Length = 390
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 396 GRYSRDFFNRHGDLRHIRRLRFWPL---NKVLIEKYDFSEKDA-----NDMADFL 442
G S+ FF+ G+L HI F L +VL++ YDFS DA + +A FL
Sbjct: 286 GNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFL 340
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 169 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 362 LFD 364
F+
Sbjct: 229 PFE 231
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 33.1 bits (74), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Query: 298 LAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACI 352
+ A D K+ DFG Y++ + ++ PE L ++T +D+WSF +
Sbjct: 160 MVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVV 219
Query: 353 CFELATGDVLFDPHSGDNYDRDEDHLALMME 383
+E+AT + P+ G + +E L +ME
Sbjct: 220 LWEIAT--LAEQPYQGLS---NEQVLRFVME 245
>pdb|1YBQ|A Chain A, Crystal Structure Of Escherichia Coli Isoaspartyl
Dipeptidase Mutant D285n Complexed With
Beta-Aspartylhistidine
Length = 390
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 396 GRYSRDFFNRHGDLRHIRRLRFWPL---NKVLIEKYDFSEKDA-----NDMADFL 442
G S+ FF+ G+L HI F L +VL++ YDFS DA + +A FL
Sbjct: 286 GNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFL 340
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 169 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 362 LFD 364
F+
Sbjct: 229 PFE 231
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 33.1 bits (74), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 168 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 227
Query: 362 LFD 364
F+
Sbjct: 228 PFE 230
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 196 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 255
Query: 362 LFD 364
F+
Sbjct: 256 PFE 258
>pdb|2AQO|A Chain A, Crystal Structure Of E. Coli Isoaspartyl Dipeptidase
Mutant E77q
pdb|2AQO|B Chain B, Crystal Structure Of E. Coli Isoaspartyl Dipeptidase
Mutant E77q
Length = 390
Score = 32.7 bits (73), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 29/55 (52%), Gaps = 8/55 (14%)
Query: 396 GRYSRDFFNRHGDLRHIRRLRFWPL---NKVLIEKYDFSEKDA-----NDMADFL 442
G S+ FF+ G+L HI F L +VL++ YDFS DA + +A FL
Sbjct: 286 GNGSQPFFDDEGNLTHIGVAGFETLLETVQVLVKDYDFSISDALRPLTSSVAGFL 340
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 168 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 227
Query: 362 LFD 364
F+
Sbjct: 228 PFE 230
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 32.7 bits (73), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 169 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 228
Query: 362 LFD 364
F+
Sbjct: 229 PFE 231
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 152 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 211
Query: 362 LFD 364
F+
Sbjct: 212 PFE 214
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 32/65 (49%), Gaps = 2/65 (3%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLGSK--YSTPADLWSFACICFELATGDVL 362
K+ DF + + + + Q+ PE + + Y+ AD +SFA I + + TG+
Sbjct: 168 AKVADFSLSQQSVHSVSGLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGP 227
Query: 363 FDPHS 367
FD +S
Sbjct: 228 FDEYS 232
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L L K+ D G A YK N + ++ PE ++ K+S +D+WS+
Sbjct: 174 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 233
Query: 350 ACICFELAT 358
+ +E+ +
Sbjct: 234 GVVLWEVFS 242
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 32.7 bits (73), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFEL-ATGD 360
K+ DFG + Q+T+ T+ ++ PEV S+YS+ +D+WSF + +E+ + G
Sbjct: 144 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 203
Query: 361 VLFDPHSGDNYDRD 374
+ ++ S D
Sbjct: 204 IPYENRSNSEVVED 217
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 362 LFD 364
F+
Sbjct: 209 PFE 211
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFEL-ATGD 360
K+ DFG + Q+T+ T+ ++ PEV S+YS+ +D+WSF + +E+ + G
Sbjct: 143 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 202
Query: 361 VLFDPHSGDNYDRD 374
+ ++ S D
Sbjct: 203 IPYENRSNSEVVED 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 21/27 (77%)
Query: 332 PEVLLGSKYSTPADLWSFACICFELAT 358
PEVL+ SK+S+ +D+W+F + +E+ +
Sbjct: 175 PEVLMYSKFSSKSDIWAFGVLMWEIYS 201
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 32.7 bits (73), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 30/63 (47%), Gaps = 2/63 (3%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQ-TRQYRCPEVLLGSKY-STPADLWSFACICFELATGDV 361
+ KL+DFG+ D TR Y PE + +Y A +WS + +++ GD+
Sbjct: 149 ELKLIDFGSGALLKDTVYTDFDGTRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDI 208
Query: 362 LFD 364
F+
Sbjct: 209 PFE 211
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFEL-ATGD 360
K+ DFG + Q+T+ T+ ++ PEV S+YS+ +D+WSF + +E+ + G
Sbjct: 146 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 205
Query: 361 VLFDPHSGDNYDRD 374
+ ++ S D
Sbjct: 206 IPYENRSNSEVVED 219
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/69 (24%), Positives = 33/69 (47%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ +L L K+ D G A YK N + ++ PE ++ K+S +D+WS+
Sbjct: 157 RNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSY 216
Query: 350 ACICFELAT 358
+ +E+ +
Sbjct: 217 GVVLWEVFS 225
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 32.7 bits (73), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 79/166 (47%), Gaps = 32/166 (19%)
Query: 35 MGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYTEAALDEIKILK 93
M F +G YVV+ +G G +S T+ A+KV KS + +E EI+IL
Sbjct: 21 MNLVFSDG-YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE----EIEILL 75
Query: 94 QIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLI---KYADYR--GVP 147
+ + P+ ++ L D + +G+HV +V E + G LL I K+ R
Sbjct: 76 RYGQ-HPN----IITLKDVYD----DGKHVYLVTELMRGGELLDKILRQKFFSEREASFV 126
Query: 148 LHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMSMIDPSKDP 193
LH + + +++LH + ++H DLKP N+L +D S +P
Sbjct: 127 LHTIGKT-------VEYLHSQ-GVVHRDLKPSNIL---YVDESGNP 161
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 49/168 (29%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T + PEVL Y D+WS + + + G + P + D E+ L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG---YTPFANGPSDTPEEILT------ 238
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA----DF 441
+I G K+ S + N ++ D
Sbjct: 239 -----RIGSG-------------------------------KFTLSGGNWNTVSETAKDL 262
Query: 442 LVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQDTGGSIS 489
+ +L P +R TA Q L HPW+ +L + ++ Q G+++
Sbjct: 263 VSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMA 310
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 32.7 bits (73), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 39/74 (52%), Gaps = 5/74 (6%)
Query: 306 KLVDFGNACWTYK-QFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFEL-ATGD 360
K+ DFG + Q+T+ T+ ++ PEV S+YS+ +D+WSF + +E+ + G
Sbjct: 141 KVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGK 200
Query: 361 VLFDPHSGDNYDRD 374
+ ++ S D
Sbjct: 201 IPYENRSNSEVVED 214
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 32.7 bits (73), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 17/149 (11%)
Query: 37 DTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIA 96
D F GR LG G F V+LA + Q +ALKV +Q E E ++ ++I
Sbjct: 15 DDFDIGR-----PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIE 67
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEI 154
++++ ++F + + + ++ E+ GE L K+ +
Sbjct: 68 IQSHLRHPNILRMYNYFH----DRKRIYLMLEFAPRGELYKELQKHGRFD----EQRSAT 119
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLL 183
L H E +IH D+KPEN+L+
Sbjct: 120 FMEELADALHYCHERKVIHRDIKPENLLM 148
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + + T Y PE++ G + DLW +C+E
Sbjct: 146 LLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 205
Query: 356 LATGDVLFD 364
G FD
Sbjct: 206 FLVGMPPFD 214
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 11/27 (40%), Positives = 21/27 (77%)
Query: 332 PEVLLGSKYSTPADLWSFACICFELAT 358
PEVL+ SK+S+ +D+W+F + +E+ +
Sbjct: 190 PEVLMYSKFSSKSDIWAFGVLMWEIYS 216
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 32.7 bits (73), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N K+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 32.7 bits (73), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 15/72 (20%), Positives = 37/72 (51%), Gaps = 8/72 (11%)
Query: 295 KELLAAVDLKCKLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADL 346
+ +L +L CK+ DFG + + + ++ +T ++ PE + K+++ +D
Sbjct: 147 RNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAIAFRKFTSASDA 206
Query: 347 WSFACICFELAT 358
WS+ + +E+ +
Sbjct: 207 WSYGIVMWEVMS 218
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 45/168 (26%), Positives = 66/168 (39%), Gaps = 42/168 (25%)
Query: 35 MGDTFKNGRYVVQSKLGWGHFSTVWLA-WDTQTSHYVALKVQKS---------AQHYTEA 84
MG T V+Q +G G F VW W + VA+K+ S A+ Y
Sbjct: 3 MGSTIAR-TIVLQESIGKGRFGEVWRGKWRGEE---VAVKIFSSREERSWFREAEIYQTV 58
Query: 85 ALDEIKILKQIAEGDPDDKKCVVKLL--DHFKHSGPNGQHVCMVFEYLGENLLTLIKYAD 142
L IL IA + D+ L D+ +H +F+YL +T+
Sbjct: 59 MLRHENILGFIAADNKDNGTWTQLWLVSDYHEHGS--------LFDYLNRYTVTVEG--- 107
Query: 143 YRGVPLHMVKEICFHILVGLDHLHREL-------SIIHTDLKPENVLL 183
M+K + GL HLH E+ +I H DLK +N+L+
Sbjct: 108 -------MIK-LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 147
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 32.7 bits (73), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 28/58 (48%), Gaps = 5/58 (8%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG N K+ TN ++ PE L Y+ +D+WSF + +E+ T
Sbjct: 197 KIADFGLARDINNIDXXKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFT 254
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 18/155 (11%)
Query: 37 DTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALK-VQKSAQHYTEAALD---EIKIL 92
+T N R ++ K+G G FS V+ A VALK VQ +A D EI +L
Sbjct: 29 NTLANFR--IEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLL 86
Query: 93 KQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKY--ADYRGVPLHM 150
KQ+ + V+K F N ++ + G+ L +IK+ R +P
Sbjct: 87 KQLNHPN------VIKYYASFIED--NELNIVLELADAGD-LSRMIKHFKKQKRLIPERT 137
Query: 151 VKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
V + + L+H+H ++H D+KP NV + +
Sbjct: 138 VWKYFVQLCSALEHMHSR-RVMHRDIKPANVFITA 171
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 15/46 (32%), Positives = 24/46 (52%), Gaps = 3/46 (6%)
Query: 324 IQTRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGD 369
+ T Y PE + + Y+ +D+WS C+ +E+A L P GD
Sbjct: 197 VGTPYYMSPERIHENGYNFKSDIWSLGCLLYEMAA---LQSPFYGD 239
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 32.3 bits (72), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 37/149 (24%), Positives = 63/149 (42%), Gaps = 17/149 (11%)
Query: 37 DTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIA 96
D F GR LG G F V+LA + Q +ALKV +Q E E ++ ++I
Sbjct: 14 DDFDIGR-----PLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIE 66
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEI 154
++++ ++F + + + ++ E+ GE L K+ +
Sbjct: 67 IQSHLRHPNILRMYNYFH----DRKRIYLMLEFAPRGELYKELQKHGRFD----EQRSAT 118
Query: 155 CFHILVGLDHLHRELSIIHTDLKPENVLL 183
L H E +IH D+KPEN+L+
Sbjct: 119 FMEELADALHYCHERKVIHRDIKPENLLM 147
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + + T Y PE++ G + DLW +C+E
Sbjct: 145 LLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 356 LATGDVLFD 364
G FD
Sbjct: 205 FLVGMPPFD 213
>pdb|1EH4|A Chain A, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1EH4|B Chain B, Binary Complex Of Casein Kinase-1 From S. Pombe With An
Atp Competitive Inhibitor, Ic261
pdb|1CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Mgatp
Length = 298
Score = 32.3 bits (72), Expect = 0.63, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIA--EGDPD 101
Y V ++G G F ++ + + VA+K + + DE + K +A G P+
Sbjct: 12 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLR-DEYRTYKLLAGCTGIPN 70
Query: 102 DKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVG 161
+ G G H +V + LG +L L+ R + V +L
Sbjct: 71 -----------VYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLAR 118
Query: 162 LDHLHRELSIIHTDLKPENVLL 183
+ +H E S+++ D+KP+N L+
Sbjct: 119 VQSIH-EKSLVYRDIKPDNFLI 139
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 22/74 (29%), Positives = 36/74 (48%), Gaps = 7/74 (9%)
Query: 306 KLVDFGNACWTYKQ--FTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFELATGD 360
K+ DFG A YK + TR ++ PE + YST +D+WS+ + +E+ +
Sbjct: 239 KICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFS-- 296
Query: 361 VLFDPHSGDNYDRD 374
+ P+ G D D
Sbjct: 297 LGGSPYPGVQMDED 310
>pdb|2CSN|A Chain A, Binary Complex Of Casein Kinase-1 With Cki7
Length = 297
Score = 32.3 bits (72), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 33/142 (23%), Positives = 60/142 (42%), Gaps = 16/142 (11%)
Query: 44 YVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIA--EGDPD 101
Y V ++G G F ++ + + VA+K + + DE + K +A G P+
Sbjct: 11 YKVGRRIGEGSFGVIFEGTNLLNNQQVAIKFEPRRSDAPQLR-DEYRTYKLLAGCTGIPN 69
Query: 102 DKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVG 161
+ G G H +V + LG +L L+ R + V +L
Sbjct: 70 -----------VYYFGQEGLHNVLVIDLLGPSLEDLLDLCG-RKFSVKTVAMAAKQMLAR 117
Query: 162 LDHLHRELSIIHTDLKPENVLL 183
+ +H E S+++ D+KP+N L+
Sbjct: 118 VQSIH-EKSLVYRDIKPDNFLI 138
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 32.3 bits (72), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ + A D K+ DFG Y++ + ++ PE L ++T +D+WSF
Sbjct: 159 RNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSF 218
Query: 350 ACICFELAT 358
+ +E+ +
Sbjct: 219 GVVLWEITS 227
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 32.3 bits (72), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 9/74 (12%)
Query: 295 KELLAAVDLKCKLVDFG-------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLW 347
+ +L +L CK+ DFG + Y I R + PE + +S+ +D+W
Sbjct: 180 RNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIR-WTAPEAIAFRTFSSASDVW 238
Query: 348 SFACICFE-LATGD 360
SF + +E LA G+
Sbjct: 239 SFGVVMWEVLAYGE 252
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 32.3 bits (72), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 33/136 (24%), Positives = 59/136 (43%), Gaps = 12/136 (8%)
Query: 50 LGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKL 109
LG G F V+LA + Q +ALKV +Q E E ++ ++I ++++
Sbjct: 22 LGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGV--EHQLRREIEIQSHLRHPNILRM 79
Query: 110 LDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHR 167
++F + + + ++ E+ GE L K+ + L H
Sbjct: 80 YNYFH----DRKRIYLMLEFAPRGELYKELQKHGRFD----EQRSATFMEELADALHYCH 131
Query: 168 ELSIIHTDLKPENVLL 183
E +IH D+KPEN+L+
Sbjct: 132 ERKVIHRDIKPENLLM 147
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/69 (27%), Positives = 28/69 (40%), Gaps = 1/69 (1%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTNDI-QTRQYRCPEVLLGSKYSTPADLWSFACICFE 355
LL + K+ DFG + + T Y PE++ G + DLW +C+E
Sbjct: 145 LLMGYKGELKIADFGWSVHAPSLRRRXMCGTLDYLPPEMIEGKTHDEKVDLWCAGVLCYE 204
Query: 356 LATGDVLFD 364
G FD
Sbjct: 205 FLVGMPPFD 213
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 32.3 bits (72), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 24/90 (26%), Positives = 42/90 (46%), Gaps = 10/90 (11%)
Query: 299 AAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACIC 353
A D K+ DFG Y++ + ++ PE L ++T +D+WSF +
Sbjct: 158 VAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVL 217
Query: 354 FELATGDVLFDPHSGDNYDRDEDHLALMME 383
+E+AT + P+ G + +E L +ME
Sbjct: 218 WEIAT--LAEQPYQGLS---NEQVLRFVME 242
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 32.3 bits (72), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 30/118 (25%), Positives = 55/118 (46%), Gaps = 14/118 (11%)
Query: 70 VALKV--QKSAQHYTEAALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVF 127
VA+KV Q + + TE + E +I+ Q+ D +V+L+ + + + +V
Sbjct: 40 VAIKVLKQGTEKADTEEMMREAQIMHQL------DNPYIVRLIGVCQ-----AEALMLVM 88
Query: 128 EYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
E G L +P+ V E+ + +G+ +L E + +H DL NVLL++
Sbjct: 89 EMAGGGPLHKFLVGKREEIPVSNVAELLHQVSMGMKYLE-EKNFVHRDLAARNVLLVN 145
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFEL 356
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+
Sbjct: 357 VKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 412
Query: 357 AT 358
AT
Sbjct: 413 AT 414
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 295 KELLAAVDLKCKLVDFGNACW--------TYKQFTNDIQTRQYRCPEVLLGSKYSTPADL 346
+ +L +L CK+ DFG + + TY ++ PE + K+++ +D+
Sbjct: 164 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDV 223
Query: 347 WSFACICFELAT 358
WS+ + +E+ +
Sbjct: 224 WSYGIVMWEVMS 235
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 32.0 bits (71), Expect = 0.78, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 41/158 (25%)
Query: 45 VVQSKLGWGHFSTVWLA-WDTQTSHYVALKVQKS---------AQHYTEAALDEIKILKQ 94
V+Q +G G F VW W + VA+K+ S A+ Y L IL
Sbjct: 45 VLQESIGKGRFGEVWRGKWRGEE---VAVKIFSSREERSWFREAEIYQTVMLRHENILGF 101
Query: 95 IAEGDPDDKKCVVKLL--DHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
IA + D+ L D+ +H +F+YL +T+ M+K
Sbjct: 102 IAADNKDNGTWTQLWLVSDYHEHGS--------LFDYLNRYTVTVEG----------MIK 143
Query: 153 EICFHILVGLDHLHREL-------SIIHTDLKPENVLL 183
+ GL HLH E+ +I H DLK +N+L+
Sbjct: 144 -LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 180
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 32.0 bits (71), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFEL 356
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+
Sbjct: 354 VKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 409
Query: 357 AT 358
AT
Sbjct: 410 AT 411
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 32.0 bits (71), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 34/82 (41%), Gaps = 14/82 (17%)
Query: 306 KLVDFGNA---CW---TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG W T K F T Y PE++ Y D W+F + +E+ G
Sbjct: 161 KIADFGMCKENIWDGVTTKXFCG---TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 217
Query: 360 DVLFDPHSGDNYDRDEDHLALM 381
P G+ D DE ++M
Sbjct: 218 QA---PFEGE--DEDELFQSIM 234
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEVLLGS 338
I++D K S +L D + KL DFG K+ + T + PE++
Sbjct: 192 IHRDIKSDS------ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL 245
Query: 339 KYSTPADLWSFACICFELATGD 360
Y D+WS + E+ G+
Sbjct: 246 PYGPEVDIWSLGIMVIEMVDGE 267
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 32.0 bits (71), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 17/67 (25%), Positives = 28/67 (41%), Gaps = 3/67 (4%)
Query: 297 LLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEVLLGSKYSTPADLWSFACIC 353
+L D + KL DFG K+ + T + PE++ Y D+WS +
Sbjct: 278 ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRLPYGPEVDIWSLGIMV 337
Query: 354 FELATGD 360
E+ G+
Sbjct: 338 IEMVDGE 344
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%), Gaps = 12/62 (19%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFEL 356
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+
Sbjct: 396 VKVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEI 451
Query: 357 AT 358
AT
Sbjct: 452 AT 453
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 32.0 bits (71), Expect = 0.87, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 47/140 (33%), Gaps = 41/140 (29%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T + PEVL Y D+WS + + TG + P + D E+ LA
Sbjct: 183 TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTG---YTPFANGPDDTPEEILA------ 233
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMADFLVPI 445
R F+ G +W N V ++ D +
Sbjct: 234 -----------RIGSGKFSLSGG--------YW--NSV-----------SDTAKDLVSKX 261
Query: 446 LDFVPEKRPTAAQCLTHPWI 465
L P +R TAA L HPWI
Sbjct: 262 LHVDPHQRLTAALVLRHPWI 281
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 80/173 (46%), Gaps = 29/173 (16%)
Query: 29 GYHAV-----RMGDTFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYT 82
G H++ R F +G Y V+ +G G +S T+ A+K+ KS + T
Sbjct: 5 GVHSIVQQLHRNSIQFTDG-YEVKEDIGVGSYSVCKRCIHKATNXEFAVKIIDKSKRDPT 63
Query: 83 EAALDEIKILKQIAEGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKY 140
E EI+IL + + P+ ++ L D + +G++V +V E GE L +++
Sbjct: 64 E----EIEILLRYGQ-HPN----IITLKDVYD----DGKYVYVVTELXKGGELLDKILRQ 110
Query: 141 ADYRGVPLHMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMSMIDPSKDP 193
+ + F I +++LH + ++H DLKP N+L +D S +P
Sbjct: 111 KFFSE---REASAVLFTITKTVEYLHAQ-GVVHRDLKPSNIL---YVDESGNP 156
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 32.0 bits (71), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 35/72 (48%), Gaps = 8/72 (11%)
Query: 295 KELLAAVDLKCKLVDFGNACW--------TYKQFTNDIQTRQYRCPEVLLGSKYSTPADL 346
+ +L +L CK+ DFG + + TY ++ PE + K+++ +D+
Sbjct: 138 RNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDV 197
Query: 347 WSFACICFELAT 358
WS+ + +E+ +
Sbjct: 198 WSYGIVMWEVMS 209
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G V LA + T VA+K+ K A E EI I K + +
Sbjct: 10 LVQT-LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKML------N 62
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 63 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 117
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 118 VYLH-GIGITHRDIKPENLLL 137
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 32.0 bits (71), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 78/163 (47%), Gaps = 32/163 (19%)
Query: 38 TFKNGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKV-QKSAQHYTEAALDEIKILKQIA 96
F +G YVV+ +G G +S T+ A+KV KS + +E EI+IL +
Sbjct: 24 VFSDG-YVVKETIGVGSYSECKRCVHKATNMEYAVKVIDKSKRDPSE----EIEILLRYG 78
Query: 97 EGDPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL-GENLLTLI---KYADYR--GVPLHM 150
+ P+ ++ L D + +G+HV +V E + G LL I K+ R LH
Sbjct: 79 Q-HPN----IITLKDVYD----DGKHVYLVTELMRGGELLDKILRQKFFSEREASFVLHT 129
Query: 151 VKEICFHILVGLDHLHRELSIIHTDLKPENVLLMSMIDPSKDP 193
+ + +++LH + ++H DLKP N+L +D S +P
Sbjct: 130 IGKT-------VEYLHSQ-GVVHRDLKPSNIL---YVDESGNP 161
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 57/168 (33%), Gaps = 49/168 (29%)
Query: 326 TRQYRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELL 385
T + PEVL Y D+WS + + + G + P + D E+ L
Sbjct: 188 TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAG---YTPFANGPSDTPEEILT------ 238
Query: 386 GMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDMA----DF 441
+I G K+ S + N ++ D
Sbjct: 239 -----RIGSG-------------------------------KFTLSGGNWNTVSETAKDL 262
Query: 442 LVPILDFVPEKRPTAAQCLTHPWINVGPRLLEPSMAATQPQDTGGSIS 489
+ +L P +R TA Q L HPW+ +L + ++ Q G+++
Sbjct: 263 VSKMLHVDPHQRLTAKQVLQHPWVTQKDKLPQSQLSHQDLQLVKGAMA 310
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 32.0 bits (71), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT---EAALDEIKILKQIAEG 98
G Y + +G G+F+ V LA T VA+K+ Q + + E++I+K +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ +VKL + + + + +V EY GE L+ + + +
Sbjct: 74 N------IVKLFEVIETE----KTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFR 120
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ + + H++ I+H DLK EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 32.0 bits (71), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLG 386
+ PE L+ SK+ +D+WSF EL T D D +AL ++++G
Sbjct: 195 WYAPECLMQSKFYIASDVWSFGVTLHELLT-----------YCDSDSSPMALFLKMIG 241
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 32.0 bits (71), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG---SKYSTPADLWSFACICFELA 357
KL DFG+A + T + PEV+L +Y D+WS C ELA
Sbjct: 193 VKLGDFGSAS-IMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 247
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 24/143 (16%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVV 107
++G G F V+ A D + S VA+ K+ S + E D IK V
Sbjct: 61 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK---------------EV 105
Query: 108 KLLDHFKHSGPNGQHVCMVFEYLGENLL--TLIKYADYRGV---PLHMVK--EICFHILV 160
+ L +H C + E+ ++ L +D V PL V+ + L
Sbjct: 106 RFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ 165
Query: 161 GLDHLHRELSIIHTDLKPENVLL 183
GL +LH ++IH D+K N+LL
Sbjct: 166 GLAYLHSH-NMIHRDVKAGNILL 187
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT---EAALDEIKILKQIAEG 98
G Y + +G G+F+ V LA T VA+K+ Q + + E++I+K +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ +VKL + + + + +V EY GE L+ + + +
Sbjct: 74 N------IVKLFEVIETE----KTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFR 120
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ + + H++ I+H DLK EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 32.0 bits (71), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT---EAALDEIKILKQIAEG 98
G Y + +G G+F+ V LA T VA+K+ Q + + E++I+K +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ +VKL + + + + +V EY GE L+ + + +
Sbjct: 74 N------IVKLFEVIETE----KTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFR 120
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ + + H++ I+H DLK EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 27/58 (46%), Gaps = 11/58 (18%)
Query: 329 YRCPEVLLGSKYSTPADLWSFACICFELATGDVLFDPHSGDNYDRDEDHLALMMELLG 386
+ PE L+ SK+ +D+WSF EL T D D +AL ++++G
Sbjct: 183 WYAPECLMQSKFYIASDVWSFGVTLHELLT-----------YCDSDSSPMALFLKMIG 229
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 32.0 bits (71), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 25/37 (67%), Gaps = 1/37 (2%)
Query: 149 HMVKEICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
H V+ I++ L+HLH+ L II+ D+K EN+LL S
Sbjct: 159 HEVQIYVGEIVLALEHLHK-LGIIYRDIKLENILLDS 194
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 32.0 bits (71), Expect = 0.99, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 41/158 (25%)
Query: 45 VVQSKLGWGHFSTVWLA-WDTQTSHYVALKVQKS---------AQHYTEAALDEIKILKQ 94
V+Q +G G F VW W + VA+K+ S A+ Y L IL
Sbjct: 32 VLQESIGKGRFGEVWRGKWRGEE---VAVKIFSSREERSWFREAEIYQTVMLRHENILGF 88
Query: 95 IAEGDPDDKKCVVKLL--DHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
IA + D+ L D+ +H +F+YL +T+ M+K
Sbjct: 89 IAADNKDNGTWTQLWLVSDYHEHGS--------LFDYLNRYTVTVEG----------MIK 130
Query: 153 EICFHILVGLDHLHREL-------SIIHTDLKPENVLL 183
+ GL HLH E+ +I H DLK +N+L+
Sbjct: 131 -LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 167
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 41/158 (25%)
Query: 45 VVQSKLGWGHFSTVWLA-WDTQTSHYVALKVQKS---------AQHYTEAALDEIKILKQ 94
V+Q +G G F VW W + VA+K+ S A+ Y L IL
Sbjct: 7 VLQESIGKGRFGEVWRGKWRGEE---VAVKIFSSREERSWFREAEIYQTVMLRHENILGF 63
Query: 95 IAEGDPDDKKCVVKLL--DHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
IA + D+ L D+ +H +F+YL +T+ M+K
Sbjct: 64 IAADNKDNGTWTQLWLVSDYHEHGS--------LFDYLNRYTVTVEG----------MIK 105
Query: 153 EICFHILVGLDHLHREL-------SIIHTDLKPENVLL 183
+ GL HLH E+ +I H DLK +N+L+
Sbjct: 106 -LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 142
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.6 bits (70), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 149 KVADFGLS----RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 204
Query: 358 T 358
T
Sbjct: 205 T 205
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 34/138 (24%), Positives = 61/138 (44%), Gaps = 10/138 (7%)
Query: 46 VQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDDKKC 105
++ KLG G F V+ + S VA+K K E L E ++K+I +
Sbjct: 15 MKHKLGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPN------ 68
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+V+LL P ++ F G NLL ++ + + V ++ + I +++L
Sbjct: 69 LVQLLGVCTREPPF--YIITEFMTYG-NLLDYLRECNRQEVSAVVLLYMATQISSAMEYL 125
Query: 166 HRELSIIHTDLKPENVLL 183
++ + IH DL N L+
Sbjct: 126 EKK-NFIHRDLAARNCLV 142
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 41/158 (25%)
Query: 45 VVQSKLGWGHFSTVWLA-WDTQTSHYVALKVQKS---------AQHYTEAALDEIKILKQ 94
V+Q +G G F VW W + VA+K+ S A+ Y L IL
Sbjct: 9 VLQESIGKGRFGEVWRGKWRGEE---VAVKIFSSREERSWFREAEIYQTVMLRHENILGF 65
Query: 95 IAEGDPDDKKCVVKLL--DHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
IA + D+ L D+ +H +F+YL +T+ M+K
Sbjct: 66 IAADNKDNGTWTQLWLVSDYHEHGS--------LFDYLNRYTVTVEG----------MIK 107
Query: 153 EICFHILVGLDHLHREL-------SIIHTDLKPENVLL 183
+ GL HLH E+ +I H DLK +N+L+
Sbjct: 108 -LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 144
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ + A D K+ DFG Y++ + ++ PE L ++T +D+WSF
Sbjct: 158 RNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSF 217
Query: 350 ACICFELAT 358
+ +E+ +
Sbjct: 218 GVVLWEITS 226
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 31/79 (39%), Gaps = 16/79 (20%)
Query: 306 KLVDFGNA---CW---TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG W T K F T Y PE++ Y D W+F + +E+ G
Sbjct: 482 KIADFGMCKENIWDGVTTKXFCG---TPDYIAPEIIAYQPYGKSVDWWAFGVLLYEMLAG 538
Query: 360 DVLFDPHSGDNYDRDEDHL 378
F+ DED L
Sbjct: 539 QAPFE-------GEDEDEL 550
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 149 KVADFGLS----RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 204
Query: 358 T 358
T
Sbjct: 205 T 205
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 31/57 (54%), Gaps = 4/57 (7%)
Query: 306 KLVDFG-NACWTYKQFTNDIQTR---QYRCPEVLLGSKYSTPADLWSFACICFELAT 358
K+ DFG + T FT + ++ PE L +K+S +D+W+F + +E+AT
Sbjct: 149 KVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIAT 205
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 152 KVADFGLS----RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 207
Query: 358 T 358
T
Sbjct: 208 T 208
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/23 (60%), Positives = 18/23 (78%), Gaps = 1/23 (4%)
Query: 161 GLDHLHRELSIIHTDLKPENVLL 183
GL HLH L+I+H DLKP N+L+
Sbjct: 130 GLAHLH-SLNIVHRDLKPHNILI 151
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 137 RAANVLVSESLMCKIADFGLARVIED---NEYTAREGAKFPIKWTAPEAINFGCFTIKSD 193
Query: 346 LWSFACICFELAT 358
+WSF + +E+ T
Sbjct: 194 VWSFGILLYEIVT 206
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 31.6 bits (70), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 38/167 (22%), Positives = 57/167 (34%), Gaps = 53/167 (31%)
Query: 304 KCKLVDFGNACWTYKQFTNDIQT----RQYRCPEVLLGSKY-STPADLWSFACICFELAT 358
K KL+DFG +QT Y PE++ G Y + AD+WS + + L
Sbjct: 146 KLKLIDFGLCAKPKGNKDYHLQTCCGSLAYAAPELIQGKSYLGSEADVWSMGILLYVLMC 205
Query: 359 GDVLFDPHSGDNYDRDEDHLALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFW 418
G + FD D++ +AL
Sbjct: 206 GFLPFD---------DDNVMALY------------------------------------- 219
Query: 419 PLNKVLIEKYDFSEKDANDMADFLVPILDFVPEKRPTAAQCLTHPWI 465
K++ KYD + + L +L P+KR + L HPWI
Sbjct: 220 --KKIMRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLNHPWI 264
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLL 183
I++GL+H+H +++ DLKP N+LL
Sbjct: 301 IILGLEHMHNRF-VVYRDLKPANILL 325
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLL 183
I++GL+H+H +++ DLKP N+LL
Sbjct: 300 IILGLEHMHNRF-VVYRDLKPANILL 324
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQYRCPEVLLG---SKYSTPADLWSFACICFELA 357
KL DFG+A + T + PEV+L +Y D+WS C ELA
Sbjct: 154 VKLGDFGSAS-IMAPANXFVGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELA 208
Score = 28.9 bits (63), Expect = 6.9, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 59/143 (41%), Gaps = 24/143 (16%)
Query: 49 KLGWGHFSTVWLAWDTQTSHYVAL-KVQKSAQHYTEAALDEIKILKQIAEGDPDDKKCVV 107
++G G F V+ A D + S VA+ K+ S + E D IK V
Sbjct: 22 EIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIK---------------EV 66
Query: 108 KLLDHFKHSGPNGQHVCMVFEYLGENLL--TLIKYADYRGV---PLHMVK--EICFHILV 160
+ L +H C + E+ ++ L +D V PL V+ + L
Sbjct: 67 RFLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEIAAVTHGALQ 126
Query: 161 GLDHLHRELSIIHTDLKPENVLL 183
GL +LH ++IH D+K N+LL
Sbjct: 127 GLAYLHSH-NMIHRDVKAGNILL 148
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 63/158 (39%), Gaps = 41/158 (25%)
Query: 45 VVQSKLGWGHFSTVWLA-WDTQTSHYVALKVQKS---------AQHYTEAALDEIKILKQ 94
V+Q +G G F VW W + VA+K+ S A+ Y L IL
Sbjct: 6 VLQESIGKGRFGEVWRGKWRGEE---VAVKIFSSREERSWFREAEIYQTVMLRHENILGF 62
Query: 95 IAEGDPDDKKCVVKLL--DHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVK 152
IA + D+ L D+ +H +F+YL +T+ M+K
Sbjct: 63 IAADNKDNGTWTQLWLVSDYHEHGS--------LFDYLNRYTVTVEG----------MIK 104
Query: 153 EICFHILVGLDHLHREL-------SIIHTDLKPENVLL 183
+ GL HLH E+ +I H DLK +N+L+
Sbjct: 105 -LALSTASGLAHLHMEIVGTQGKPAIAHRDLKSKNILV 141
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLL 183
I++GL+H+H +++ DLKP N+LL
Sbjct: 301 IILGLEHMHNRF-VVYRDLKPANILL 325
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 12/26 (46%), Positives = 20/26 (76%), Gaps = 1/26 (3%)
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLL 183
I++GL+H+H +++ DLKP N+LL
Sbjct: 301 IILGLEHMHNRF-VVYRDLKPANILL 325
>pdb|3OFM|A Chain A, Structure Of A Human Ck2alpha Prime, The Paralog Isoform
Of The Catalytic Subunit Of Protein Kinase Ck2 From Homo
Sapiens
Length = 350
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
++KL+D K P + +VFEY+ + Y+ + ++ + +L LD+
Sbjct: 95 IIKLIDTVK--DPVSKTPALVFEYINNTDFKQL----YQILTDFDIRFYMYELLKALDYC 148
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 149 HSK-GIMHRDVKPHNVMI 165
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 156 KVADFGLS----RLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 358 T 358
T
Sbjct: 212 T 212
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 156 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 358 T 358
T
Sbjct: 212 T 212
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 295 KELLAAVDLKCKLVDFG---------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPAD 345
+ +L +L CK+ DFG A +T + I+ + PE + K+++ +D
Sbjct: 153 RNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIR---WTAPEAIAFRKFTSASD 209
Query: 346 LWSFACICFELAT 358
+WS+ + +E+ +
Sbjct: 210 VWSYGIVMWEVVS 222
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 156 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 358 T 358
T
Sbjct: 212 T 212
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 153 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 358 T 358
T
Sbjct: 209 T 209
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 151 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 358 T 358
T
Sbjct: 207 T 207
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ + A D K+ DFG Y++ + ++ PE L ++T +D+WSF
Sbjct: 160 RNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSF 219
Query: 350 ACICFELAT 358
+ +E+ +
Sbjct: 220 GVVLWEITS 228
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 31.6 bits (70), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 153 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 358 T 358
T
Sbjct: 209 T 209
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 151 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 358 T 358
T
Sbjct: 207 T 207
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 151 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 358 T 358
T
Sbjct: 207 T 207
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 153 KVADFGLS----RLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 208
Query: 358 T 358
T
Sbjct: 209 T 209
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 151 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 358 T 358
T
Sbjct: 207 T 207
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/71 (29%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 297 LLAAVDLKCKLVDFGNA-CWTYKQFTNDIQTRQY-------RCPEVLLGSKYSTPADLWS 348
LL++ L DFG+A C D+ T Y PEV+LG D+WS
Sbjct: 198 LLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 257
Query: 349 FACICFELATG 359
C+ + G
Sbjct: 258 SCCMMLHMLNG 268
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 152 KVADFGLS----RLMTGDTYTAPAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 207
Query: 358 T 358
T
Sbjct: 208 T 208
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 31.6 bits (70), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 164 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 219
Query: 358 T 358
T
Sbjct: 220 T 220
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ + A D K+ DFG Y++ + ++ PE L ++T +D+WSF
Sbjct: 159 RNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSF 218
Query: 350 ACICFELAT 358
+ +E+ +
Sbjct: 219 GVVLWEITS 227
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEVLLGS 338
I++D K S +L D + KL DFG K+ + T + PE++
Sbjct: 149 IHRDIKSDS------ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL 202
Query: 339 KYSTPADLWSFACICFELATGD 360
Y D+WS + E+ G+
Sbjct: 203 PYGPEVDIWSLGIMVIEMVDGE 224
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/69 (23%), Positives = 32/69 (46%), Gaps = 5/69 (7%)
Query: 295 KELLAAVDLKCKLVDFGNA-----CWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ + A D K+ DFG Y++ + ++ PE L ++T +D+WSF
Sbjct: 159 RNCMVAHDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSF 218
Query: 350 ACICFELAT 358
+ +E+ +
Sbjct: 219 GVVLWEITS 227
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 132 RAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSD 188
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 189 VWSFGILLTEIVT 201
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 31.2 bits (69), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 64/141 (45%), Gaps = 15/141 (10%)
Query: 45 VVQSKLGWGHFSTVWLAWDTQTSHYVALKV--QKSAQHYTEAALDEIKILKQIAEGDPDD 102
+VQ+ LG G + V LA + T VA+K+ K A E EI I + +
Sbjct: 11 LVQT-LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAML------N 63
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGL 162
+ VVK H + N Q++ + + GE + G+P + ++ G+
Sbjct: 64 HENVVKFYGHRREG--NIQYLFLEYCSGGE---LFDRIEPDIGMPEPDAQRFFHQLMAGV 118
Query: 163 DHLHRELSIIHTDLKPENVLL 183
+LH + I H D+KPEN+LL
Sbjct: 119 VYLHG-IGITHRDIKPENLLL 138
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEVLLGS 338
I++D K S +L D + KL DFG K+ + T + PE++
Sbjct: 147 IHRDIKSDS------ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL 200
Query: 339 KYSTPADLWSFACICFELATGD 360
Y D+WS + E+ G+
Sbjct: 201 PYGPEVDIWSLGIMVIEMVDGE 222
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 131 RAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSD 187
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 188 VWSFGILLTEIVT 200
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEVLLGS 338
I++D K S +L D + KL DFG K+ + T + PE++
Sbjct: 142 IHRDIKSDS------ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL 195
Query: 339 KYSTPADLWSFACICFELATGD 360
Y D+WS + E+ G+
Sbjct: 196 PYGPEVDIWSLGIMVIEMVDGE 217
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 146 RAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSD 202
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 203 VWSFGILLTEIVT 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 145 RAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSD 201
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 202 VWSFGILLTEIVT 214
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 25/56 (44%), Gaps = 2/56 (3%)
Query: 306 KLVDFGNACWT--YKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
KL DFG A + + T Y PEVL YS P D+W+ I + L G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 295 KELLAAVDLKCKLVDFG---------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPAD 345
+ +L +L CK+ DFG A +T + I+ + PE + K+++ +D
Sbjct: 160 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR---WTAPEAIAYRKFTSASD 216
Query: 346 LWSFACICFELAT 358
+WS+ + +E+ +
Sbjct: 217 VWSYGIVMWEVMS 229
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 155 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 210
Query: 358 T 358
T
Sbjct: 211 T 211
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 20/41 (48%)
Query: 316 TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
Y + T+ Y PE + G+ YS D++S I FEL
Sbjct: 229 AYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFEL 269
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 31.2 bits (69), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 144 RAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSD 200
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 201 VWSFGILLTEIVT 213
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 156 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 358 T 358
T
Sbjct: 212 T 212
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 156 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 211
Query: 358 T 358
T
Sbjct: 212 T 212
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 151 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 358 T 358
T
Sbjct: 207 T 207
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 31/61 (50%), Gaps = 12/61 (19%)
Query: 306 KLVDFGNACWTYKQFTNDIQTR--------QYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG + + T D T ++ PE L +K+S +D+W+F + +E+A
Sbjct: 151 KVADFGLS----RLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIA 206
Query: 358 T 358
T
Sbjct: 207 T 207
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 199 VWSFGILLTEIVT 211
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 18/71 (25%), Positives = 34/71 (47%), Gaps = 8/71 (11%)
Query: 295 KELLAAVDLKCKLVDFGNACW-------TYKQFTNDIQTRQYRCPEVLLGSKYSTPADLW 347
+ +L +L CK+ DFG A Y I R + PE + K+++ +D+W
Sbjct: 176 RNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIR-WTSPEAIAYRKFTSASDVW 234
Query: 348 SFACICFELAT 358
S+ + +E+ +
Sbjct: 235 SYGIVLWEVMS 245
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 29/72 (40%), Gaps = 9/72 (12%)
Query: 305 CKLVDFGNACWTYKQFTNDIQTRQ------YRCPEVLLGSKYSTPADLWSFACICFELAT 358
CKL DFG + N + T Y PE+L Y D W+ + +E+
Sbjct: 163 CKLADFG---MCKEGICNGVTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLC 219
Query: 359 GDVLFDPHSGDN 370
G F+ + D+
Sbjct: 220 GHAPFEAENEDD 231
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 295 KELLAAVDLKCKLVDFG---------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPAD 345
+ +L +L CK+ DFG A +T + I+ + PE + K+++ +D
Sbjct: 145 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR---WTAPEAIAYRKFTSASD 201
Query: 346 LWSFACICFELAT 358
+WS+ + +E+ +
Sbjct: 202 VWSYGIVMWEVMS 214
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
KL DFG N + F T Y PEVL YS P D+W+ I + L G
Sbjct: 147 KLADFGLAIEVNDSEAWHGFAG---TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 202
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 25/59 (42%), Gaps = 8/59 (13%)
Query: 306 KLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELATG 359
KL DFG N + F T Y PEVL YS P D+W+ I + L G
Sbjct: 148 KLADFGLAIEVNDSEAWHGFAG---TPGYLSPEVLKKDPYSKPVDIWACGVILYILLVG 203
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Query: 251 HTSVDAEPNGDSVEDQQNGSLIKNEATSNEGINKDCKRPSRSRRKELLAAVDLKCKLVDF 310
H E +++ ++++ E ++K+ + + +L D ++ DF
Sbjct: 101 HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADF 160
Query: 311 GNACW--TYKQFTND------IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATG 359
G + + T T + + T + PEV+ + Y AD+WSF ELATG
Sbjct: 161 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 218
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 31.2 bits (69), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 141 RAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSD 197
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 198 VWSFGILLTEIVT 210
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 16/72 (22%), Positives = 34/72 (47%), Gaps = 8/72 (11%)
Query: 295 KELLAAVDLKCKLVDFGNACW--------TYKQFTNDIQTRQYRCPEVLLGSKYSTPADL 346
+ +L +L CK+ DFG + + TY ++ PE + K+++ +D
Sbjct: 145 RNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAIAFRKFTSASDA 204
Query: 347 WSFACICFELAT 358
WS+ + +E+ +
Sbjct: 205 WSYGIVMWEVMS 216
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 142 RAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSD 198
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 199 VWSFGILLTEIVT 211
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/82 (25%), Positives = 34/82 (41%), Gaps = 9/82 (10%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEVLLGS 338
I++D K S +L D + KL DFG K+ + T + PE++
Sbjct: 138 IHRDIKSDS------ILLTHDGRVKLSDFGFCAQVSKEVPRRKXLVGTPYWMAPELISRL 191
Query: 339 KYSTPADLWSFACICFELATGD 360
Y D+WS + E+ G+
Sbjct: 192 PYGPEVDIWSLGIMVIEMVDGE 213
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 138 RAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSD 194
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 195 VWSFGILLTEIVT 207
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 137 RAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSD 193
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 194 VWSFGILLTEIVT 206
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 49/118 (41%), Gaps = 9/118 (7%)
Query: 251 HTSVDAEPNGDSVEDQQNGSLIKNEATSNEGINKDCKRPSRSRRKELLAAVDLKCKLVDF 310
H E +++ ++++ E ++K+ + + +L D ++ DF
Sbjct: 106 HIVAKGEHKSGVLDESTIATILREVLEGLEYLHKNGQIHRDVKAGNILLGEDGSVQIADF 165
Query: 311 GNACW--TYKQFTND------IQTRQYRCPEVLLGSK-YSTPADLWSFACICFELATG 359
G + + T T + + T + PEV+ + Y AD+WSF ELATG
Sbjct: 166 GVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATG 223
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIED---NEYTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 32/73 (43%), Gaps = 10/73 (13%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTRQ-------YRCPEVLLGSKYSTPAD 345
R +L + L CK+ DFG A N+ R+ + PE + ++ +D
Sbjct: 136 RAANILVSDTLSCKIADFGLARLIED---NEXTAREGAKFPIKWTAPEAINYGTFTIKSD 192
Query: 346 LWSFACICFELAT 358
+WSF + E+ T
Sbjct: 193 VWSFGILLTEIVT 205
>pdb|3E3B|X Chain X, Crystal Structure Of Catalytic Subunit Of Human Protein
Kinase Ck2alpha Prime With A Potent Indazole-Derivative
Inhibitor
Length = 339
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 40/78 (51%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
++KL+D K P + +VFEY+ + Y+ + ++ + +L LD+
Sbjct: 100 IIKLIDTVK--DPVSKTPALVFEYINNTDFKQL----YQILTDFDIRFYMYELLKALDYC 153
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 154 HSK-GIMHRDVKPHNVMI 170
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 17/73 (23%), Positives = 36/73 (49%), Gaps = 12/73 (16%)
Query: 295 KELLAAVDLKCKLVDFG---------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPAD 345
+ +L +L CK+ DFG A +T + I+ + PE + K+++ +D
Sbjct: 139 RNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIR---WTAPEAIAYRKFTSASD 195
Query: 346 LWSFACICFELAT 358
+WS+ + +E+ +
Sbjct: 196 VWSYGIVMWEVMS 208
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 30.8 bits (68), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQ---HYTEAALDEIKILKQIAEG 98
G Y + +G G+F+ V LA T VA+K+ Q + E++I+K +
Sbjct: 15 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKIL--N 72
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
P+ +VKL + + + + ++ EY GE L+ + + +
Sbjct: 73 HPN----IVKLFEVIETE----KTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFR 121
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ + + H++ I+H DLK EN+LL
Sbjct: 122 QIVSAVQYCHQK-RIVHRDLKAENLLL 147
>pdb|3E7E|A Chain A, Structure And Substrate Recruitment Of The Human Spindle
Checkpoint Kinase Bub
Length = 365
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 59/146 (40%), Gaps = 17/146 (11%)
Query: 46 VQSKLGWGHFSTVWLAW-----DTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEG-D 99
V LG G F+ V+ A D + LKVQK A + E I Q+ E
Sbjct: 69 VHHLLGEGAFAQVYEATQGDLNDAKNKQKFVLKVQKPANPW------EFYIGTQLMERLK 122
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGE--NLLTLIKYADYRGVPLHMVKEICFH 157
P + +K H NG + G N + L K + +P +V
Sbjct: 123 PSMQHMFMKFYS--AHLFQNGSVLVGELYSYGTLLNAINLYKNTPEKVMPQGLVISFAMR 180
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLL 183
+L ++ +H + IIH D+KP+N +L
Sbjct: 181 MLYMIEQVH-DCEIIHGDIKPDNFIL 205
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 57/139 (41%), Gaps = 14/139 (10%)
Query: 48 SKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTE---AALDEIKILKQIAEGDPDDKK 104
++G G VW +T H +A+K + + + E +D +LK D
Sbjct: 31 GEMGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKS------HDCP 84
Query: 105 CVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDH 164
+V+ F V + E +G L K +P ++ ++ I+ L +
Sbjct: 85 YIVQCFGTF----ITNTDVFIAMELMGTCAEKLKKRMQ-GPIPERILGKMTVAIVKALYY 139
Query: 165 LHRELSIIHTDLKPENVLL 183
L + +IH D+KP N+LL
Sbjct: 140 LKEKHGVIHRDVKPSNILL 158
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 65/147 (44%), Gaps = 19/147 (12%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQ---HYTEAALDEIKILKQIAEG 98
G Y + +G G+F+ V LA T VA+K+ Q + E++I+K +
Sbjct: 12 GNYRLLKTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHP 71
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ +VKL + + + + ++ EY GE L+ + + +
Sbjct: 72 N------IVKLFEVIETE----KTLYLIMEYASGGEVFDYLVAHGRMKE---KEARSKFR 118
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ + + H++ I+H DLK EN+LL
Sbjct: 119 QIVSAVQYCHQK-RIVHRDLKAENLLL 144
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT---EAALDEIKILKQIAEG 98
G Y + +G G+F+ V LA T VA+++ Q + + E++I+K +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ +VKL + + + + +V EY GE L+ + + +
Sbjct: 74 N------IVKLFEVIETE----KTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFR 120
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ + + H++ I+H DLK EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 32/75 (42%), Gaps = 14/75 (18%)
Query: 293 RRKELLAAVDLKCKLVDFGNACWTYKQFTNDIQTR---------QYRCPEVLLGSKYSTP 343
R +L + L CK+ DFG A + D + ++ PE + ++
Sbjct: 136 RAANILVSDTLSCKIADFGLA-----RLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIK 190
Query: 344 ADLWSFACICFELAT 358
+D+WSF + E+ T
Sbjct: 191 SDVWSFGILLTEIVT 205
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 30.8 bits (68), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 35/147 (23%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT---EAALDEIKILKQIAEG 98
G Y + +G G+F+ V LA T VA+++ Q + + E++I+K +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHP 73
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ +VKL + + + + +V EY GE L+ + + +
Sbjct: 74 N------IVKLFEVIETE----KTLYLVMEYASGGEVFDYLVAHGRMKE---KEARAKFR 120
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ + + H++ I+H DLK EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 36/80 (45%), Gaps = 9/80 (11%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNACWTYKQFTND---IQTRQYRCPEVLLGS 338
+++D K P+ LL K+ DFG + F T ++ PEVL
Sbjct: 161 VHRDLKSPN------LLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPEWMAPEVLRDE 214
Query: 339 KYSTPADLWSFACICFELAT 358
+ +D++SF I +ELAT
Sbjct: 215 PSNEKSDVYSFGVILWELAT 234
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/28 (50%), Positives = 20/28 (71%), Gaps = 1/28 (3%)
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLLMS 185
IL + H H ++ ++H DLKPEN+LL S
Sbjct: 112 ILEAVLHCH-QMGVVHRDLKPENLLLAS 138
Score = 30.0 bits (66), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 25/61 (40%), Gaps = 11/61 (18%)
Query: 306 KLVDFGNACWTYKQFTNDIQ-------TRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
KL DFG A + D Q T Y PEVL Y P D+W+ I + L
Sbjct: 146 KLADFGLAI----EVQGDQQAWFGFAGTPGYLSPEVLRKEAYGKPVDIWACGVILYILLV 201
Query: 359 G 359
G
Sbjct: 202 G 202
>pdb|2HEH|A Chain A, Crystal Structure Of The Kif2c Motor Domain (Casp Target)
Length = 387
Score = 30.8 bits (68), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 15/47 (31%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Query: 294 RKELLAAVDLKCKLVDFGNACWTYKQ-FTNDIQTRQYRCPEVLLGSK 339
++ L+ + D K++D G+AC T Q F N +R + C +++L +K
Sbjct: 229 QEHLVNSADDVIKMIDMGSACRTSGQTFANSNSSRSHACFQIILRAK 275
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 30.8 bits (68), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 328 QYRCPEVLLGSKYSTPADLWSFACICFEL 356
++ PE L K+ST +D+WSF + +E+
Sbjct: 179 KWTAPEALREKKFSTKSDVWSFGILLWEI 207
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 21/74 (28%)
Query: 298 LAAVDLKCKLVDFGNACWTYKQFTNDIQTR-------------QYRCPEVLLGSKYSTPA 344
+ A D K+ DFG T DI ++ PE L ++T +
Sbjct: 155 MVAEDFTVKIGDFG--------MTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 206
Query: 345 DLWSFACICFELAT 358
D+WSF + +E+AT
Sbjct: 207 DVWSFGVVLWEIAT 220
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 328 QYRCPEVLLGSKYSTPADLWSFACICFEL 356
++ PE L K+ST +D+WSF + +E+
Sbjct: 164 KWTAPEALREKKFSTKSDVWSFGILLWEI 192
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 30.8 bits (68), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 20/74 (27%), Positives = 31/74 (41%), Gaps = 21/74 (28%)
Query: 298 LAAVDLKCKLVDFGNACWTYKQFTNDIQTR-------------QYRCPEVLLGSKYSTPA 344
+ A D K+ DFG T DI ++ PE L ++T +
Sbjct: 164 MVAEDFTVKIGDFG--------MTRDIXETDXXRKGGKGLLPVRWMSPESLKDGVFTTYS 215
Query: 345 DLWSFACICFELAT 358
D+WSF + +E+AT
Sbjct: 216 DVWSFGVVLWEIAT 229
>pdb|3PVG|A Chain A, Crystal Structure Of Z. Mays Ck2 Alpha Subunit In Complex
With The Inhibitor
4,5,6,7-Tetrabromo-1-Carboxymethylbenzimidazole (K68)
Length = 331
Score = 30.8 bits (68), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + + + ++FEY+ ++ Y + + ++ + +L LD+
Sbjct: 88 IVKLLDIVRDQ--HSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYC 141
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|2PVH|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVJ|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVK|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVL|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVM|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|2PVN|A Chain A, Structure-Based Design Of Pyrazolo[1,5-A][1,3,5]triazine
Derivatives As Potent Inhibitors Of Protein Kinase Ck2
pdb|3BE9|A Chain A, Structure-Based Design And Synthesis Of Novel Macrocyclic
Pyrazolo[1,5-A] [1,3,5]triazine Compounds As Potent
Inhibitors Of Protein Kinase Ck2 And Their Anticancer
Activities
Length = 352
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + + + ++FEY+ ++ Y + + ++ + +L LD+
Sbjct: 109 IVKLLDIVRDQ--HSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYC 162
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 163 HSQ-GIMHRDVKPHNVMI 179
>pdb|4ANM|A Chain A, Complex Of Ck2 With A Cdc7 Inhibitor
Length = 335
Score = 30.4 bits (67), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + + + ++FEY+ ++ Y + + ++ + +L LD+
Sbjct: 90 IVKLLDIVRDQ--HSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYC 143
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 144 HSQ-GIMHRDVKPHNVMI 160
>pdb|2QC6|A Chain A, Protein Kinase Ck2 In Complex With Dbc
pdb|3FL5|A Chain A, Protein Kinase Ck2 In Complex With The Inhibitor
Quinalizarin
pdb|3PZH|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With
Emodin At 1.92 A Resolution
Length = 332
Score = 30.4 bits (67), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + + + ++FEY+ ++ Y + + ++ + +L LD+
Sbjct: 89 IVKLLDIVRDQ--HSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYC 142
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 143 HSQ-GIMHRDVKPHNVMI 159
>pdb|1DS5|A Chain A, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|B Chain B, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|C Chain C, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1DS5|D Chain D, Dimeric Crystal Structure Of The Alpha Subunit In Complex
With Two Beta Peptides Mimicking The Architecture Of The
Tetrameric Protein Kinase Ck2 Holoenzyme.
pdb|1F0Q|A Chain A, Crystal Structure Of The Alpha Subunit Of Protein Kinase
Ck2 In Complex With The Nucleotide Competitive Inhibitor
Emodin
pdb|1J91|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1J91|B Chain B, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Atp-Competitive Inhibitor 4,5,6,7-
Tetrabromobenzotriazole
pdb|1JAM|A Chain A, Crystal Structure Of Apo-Form Of Z. Mays Ck2 Protein
Kinase Alpha Subunit
pdb|1LP4|A Chain A, Crystal Structure Of A Binary Complex Of The Catalytic
Subunit Of Protein Kinase Ck2 With Mg-Amppnp
pdb|1LPU|A Chain A, Low Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1LR4|A Chain A, Room Temperature Crystal Structure Of The Apo-Form Of The
Catalytic Subunit Of Protein Kinase Ck2 From Zea Mays
pdb|1OM1|A Chain A, Crystal Structure Of Maize Ck2 Alpha In Complex With Iqa
pdb|1ZOE|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|1ZOG|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives
pdb|1ZOH|A Chain A, Crystal Structure Of Protein Kinase Ck2 In Complex With
Tbb- Derivatives Inhibitors
pdb|2OXD|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole K17, K22 And K32 Inhibitors
pdb|2OXX|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|A Chain A, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|2OXY|B Chain B, Protein Kinase Ck2 In Complex With
Tetrabromobenzoimidazole Derivatives K17, K22 And K32
pdb|3PWD|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Nbc (Z1)
Length = 332
Score = 30.4 bits (67), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + + + ++FEY+ ++ Y + + ++ + +L LD+
Sbjct: 89 IVKLLDIVRDQ--HSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYC 142
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 143 HSQ-GIMHRDVKPHNVMI 159
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 297 LLAAVDLKCKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
L+ D K+ DFG + T K F T +Y PEVL + Y D W
Sbjct: 141 LMLDKDGHIKITDFGLCKEGISDGATMKXFCG---TPEYLAPEVLEDNDYGRAVDWWGLG 197
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHL--ALMMELLGMMPRKIA 393
+ +E+ G + F Y++D + L ++ME + PR ++
Sbjct: 198 VVMYEMMCGRLPF-------YNQDHERLFELILMEEI-RFPRTLS 234
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 11/29 (37%), Positives = 19/29 (65%)
Query: 328 QYRCPEVLLGSKYSTPADLWSFACICFEL 356
++ PE L K+ST +D+WSF + +E+
Sbjct: 351 KWTAPEALREKKFSTKSDVWSFGILLWEI 379
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 30.4 bits (67), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 16/67 (23%), Positives = 34/67 (50%), Gaps = 5/67 (7%)
Query: 295 KELLAAVDLKCKLVDFG-----NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSF 349
+ L ++ K+ DFG + YK ND ++ PE + ++Y+T +D+W++
Sbjct: 203 RNCLVGENMVVKIADFGLSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAY 262
Query: 350 ACICFEL 356
+ +E+
Sbjct: 263 GVVLWEI 269
>pdb|3KXG|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
3,4,5,6,7-Pentabromo-1h-Indazole (K64)
pdb|3KXH|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor
(2-Dymethylammino-4,5,6,7-Tetrabromobenzoimidazol-1yl-
Acetic Acid (K66)
Length = 327
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + + + ++FEY+ ++ Y + + ++ + +L LD+
Sbjct: 88 IVKLLDIVRDQ--HSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYC 141
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 303 LKCKLVDFGNACWTYK-----QFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG A + K + + T Y PE L G + + +D++SF + E+
Sbjct: 170 FTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEII 228
Query: 358 TGDVLFDPH 366
TG D H
Sbjct: 229 TGLPAVDEH 237
>pdb|4DGN|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Luteolin
Length = 326
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + + + ++FEY+ ++ Y + + ++ + +L LD+
Sbjct: 88 IVKLLDIVRDQ--HSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYC 141
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|1DAW|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Amppnp
pdb|1DAY|A Chain A, Crystal Structure Of A Binary Complex Of Protein Kinase
Ck2 (Alpha-Subunit) And Mg-Gmppnp
pdb|1M2Q|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-Xanten-9-
OneCK2 KINASE COMPLEX
pdb|1M2R|A Chain A, Crystal Structure Of 5,8-Di-Amino-1,4-Di-Hydroxy-
AnthraquinoneCK2 KINASE COMPLEX
pdb|3KXM|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor K74
pdb|3KXN|A Chain A, Crystal Structure Of Z. Mays Ck2 Kinase Alpha Subunit In
Complex With The Inhibitor Tetraiodobenzimidazole (K88)
Length = 327
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + + + ++FEY+ ++ Y + + ++ + +L LD+
Sbjct: 88 IVKLLDIVRDQ--HSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYC 141
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 32/79 (40%), Gaps = 16/79 (20%)
Query: 306 KLVDFGNACWTYKQFTNDIQTRQ------YRCPEVLLGSKYSTPADLWSFACICFELATG 359
K+ DFG + + + TR+ Y PE++ Y D W++ + +E+ G
Sbjct: 160 KIADFG---MCKEHMMDGVTTREFCGTPDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAG 216
Query: 360 DVLFDPHSGDNYDRDEDHL 378
FD DED L
Sbjct: 217 QPPFD-------GEDEDEL 228
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 297 LLAAVDLKCKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
L+ D K+ DFG + T K F T +Y PEVL + Y D W
Sbjct: 139 LMLDKDGHIKITDFGLCKEGISDGATMKTFCG---TPEYLAPEVLEDNDYGRAVDWWGLG 195
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHL--ALMMELLGMMPRKIA 393
+ +E+ G + F Y++D + L ++ME + PR ++
Sbjct: 196 VVMYEMMCGRLPF-------YNQDHERLFELILMEEI-RFPRTLS 232
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 297 LLAAVDLKCKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
L+ D K+ DFG + T K F T +Y PEVL + Y D W
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKTFCG---TPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHL--ALMMELLGMMPRKIA 393
+ +E+ G + F Y++D + L ++ME + PR ++
Sbjct: 193 VVMYEMMCGRLPF-------YNQDHERLFELILMEEI-RFPRTLS 229
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 30.4 bits (67), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 297 LLAAVDLKCKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
L+ D K+ DFG + T K F T +Y PEVL + Y D W
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKXFCG---TPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHL--ALMMELLGMMPRKIA 393
+ +E+ G + F Y++D + L ++ME + PR ++
Sbjct: 193 VVMYEMMCGRLPF-------YNQDHERLFELILMEEI-RFPRTLS 229
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 297 LLAAVDLKCKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
L+ D K+ DFG + T K F T +Y PEVL + Y D W
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKTFCG---TPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHL--ALMMELLGMMPRKIA 393
+ +E+ G + F Y++D + L ++ME + PR ++
Sbjct: 193 VVMYEMMCGRLPF-------YNQDHERLFELILMEEI-RFPRTLS 229
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 30.4 bits (67), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 297 LLAAVDLKCKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
L+ D K+ DFG + T K F T +Y PEVL + Y D W
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKXFCG---TPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHL--ALMMELLGMMPRKIA 393
+ +E+ G + F Y++D + L ++ME + PR ++
Sbjct: 193 VVMYEMMCGRLPF-------YNQDHERLFELILMEEI-RFPRTLS 229
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 22/80 (27%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 282 INKDCKRPSRSRRKELLAAVDLKCKLVDFGNA---CWTYKQFTNDIQTRQYRCPEVLLGS 338
++++ K P+ LL K+ DFG + T+ + T ++ PEVL
Sbjct: 161 VHRNLKSPN------LLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPEWMAPEVLRDE 214
Query: 339 KYSTPADLWSFACICFELAT 358
+ +D++SF I +ELAT
Sbjct: 215 PSNEKSDVYSFGVILWELAT 234
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 31/155 (20%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDP 100
N Y +++ +G G + V +A T +++++A+ + ++++ KQ E
Sbjct: 25 NQYYTLENTIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVEDVDRFKQEIE--- 75
Query: 101 DDKKCVVKLLDHFKHSGPNGQHVCMVFE-----YLGENLLTLIKYADYRGVPLHMVKE-- 153
++K LDH PN + FE YL L T + + R V + +E
Sbjct: 76 -----IMKSLDH-----PNIIRLYETFEDNTDIYLVMELCTGGELFE-RVVHKRVFRESD 124
Query: 154 ---ICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
I +L + + H+ L++ H DLKPEN L ++
Sbjct: 125 AARIMKDVLSAVAYCHK-LNVAHRDLKPENFLFLT 158
>pdb|1M2P|A Chain A, Crystal Structure Of 1,8-Di-Hydroxy-4-Nitro-
AnthraquinoneCK2 KINASE COMPLEX
pdb|4DGO|A Chain A, Crystal Structure Of Maize Ck2 In Complex With Tyrphostin
Ag99
Length = 325
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + + + ++FEY+ ++ Y + + ++ + +L LD+
Sbjct: 88 IVKLLDIVRDQ--HSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYC 141
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|4DGM|A Chain A, Crystal Structure Of Maize Ck2 In Complex With The
Inhibitor Apigenin
Length = 326
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 20/78 (25%), Positives = 41/78 (52%), Gaps = 7/78 (8%)
Query: 106 VVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHILVGLDHL 165
+VKLLD + + + ++FEY+ ++ Y + + ++ + +L LD+
Sbjct: 88 IVKLLDIVRDQ--HSKTPSLIFEYVNNTDFKVL----YPTLTDYDIRYYIYELLKALDYC 141
Query: 166 HRELSIIHTDLKPENVLL 183
H + I+H D+KP NV++
Sbjct: 142 HSQ-GIMHRDVKPHNVMI 158
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 30.0 bits (66), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 45/105 (42%), Gaps = 19/105 (18%)
Query: 297 LLAAVDLKCKLVDFG------NACWTYKQFTNDIQTRQYRCPEVLLGSKYSTPADLWSFA 350
L+ D K+ DFG + T K F T +Y PEVL + Y D W
Sbjct: 136 LMLDKDGHIKITDFGLCKEGISDGATMKXFCG---TPEYLAPEVLEDNDYGRAVDWWGLG 192
Query: 351 CICFELATGDVLFDPHSGDNYDRDEDHL--ALMMELLGMMPRKIA 393
+ +E+ G + F Y++D + L ++ME + PR ++
Sbjct: 193 VVMYEMMCGRLPF-------YNQDHERLFELILMEEI-RFPRTLS 229
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 65/147 (44%), Gaps = 19/147 (12%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT---EAALDEIKILKQIAEG 98
G Y + +G G+F+ V LA T VA+K+ Q + + E++I K +
Sbjct: 14 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHP 73
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ +VKL + + + + +V EY GE L+ + + +
Sbjct: 74 N------IVKLFEVIETE----KTLYLVXEYASGGEVFDYLVAHGRXKE---KEARAKFR 120
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ + + H++ I+H DLK EN+LL
Sbjct: 121 QIVSAVQYCHQKF-IVHRDLKAENLLL 146
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 30.0 bits (66), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 70/155 (45%), Gaps = 31/155 (20%)
Query: 41 NGRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDP 100
N Y +++ +G G + V +A T +++++A+ + ++++ KQ E
Sbjct: 8 NQYYTLENTIGRGSWGEVKIAVQKGT------RIRRAAKKIPKYFVEDVDRFKQEIE--- 58
Query: 101 DDKKCVVKLLDHFKHSGPNGQHVCMVFE-----YLGENLLTLIKYADYRGVPLHMVKE-- 153
++K LDH PN + FE YL L T + + R V + +E
Sbjct: 59 -----IMKSLDH-----PNIIRLYETFEDNTDIYLVMELCTGGELFE-RVVHKRVFRESD 107
Query: 154 ---ICFHILVGLDHLHRELSIIHTDLKPENVLLMS 185
I +L + + H+ L++ H DLKPEN L ++
Sbjct: 108 AARIMKDVLSAVAYCHK-LNVAHRDLKPENFLFLT 141
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 30.0 bits (66), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 46/152 (30%)
Query: 326 TRQYRCPEVLLG-----SKYSTPADLWSFACICFELATGDVLFDPHSGDN--YDRDEDHL 378
+ +Y PEV+ S Y DLWS I + L +G F G + +DR E
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
A M+ I G KY+F +KD +
Sbjct: 244 ACQ----NMLFESIQEG-------------------------------KYEFPDKDWAHI 268
Query: 439 A----DFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ D + +L ++R +AAQ L HPW+
Sbjct: 269 SCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 30.0 bits (66), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Query: 303 LKCKLVDFGNACWTYK-----QFTNDIQTRQYRCPEVLLGSKYSTPADLWSFACICFELA 357
K+ DFG A + K + + T Y PE L G + + +D++SF + E+
Sbjct: 161 FTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EITPKSDIYSFGVVLLEII 219
Query: 358 TGDVLFDPH 366
TG D H
Sbjct: 220 TGLPAVDEH 228
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 29.6 bits (65), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 303 LKCKLVDFGNACWTYKQFTNDIQ------TRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
K+ DFG A + K F + T Y PE L G + + +D++SF + E+
Sbjct: 170 FTAKISDFGLARASEK-FAQTVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEI 227
Query: 357 ATGDVLFDPH 366
TG D H
Sbjct: 228 ITGLPAVDEH 237
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 151 VKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
VK +++ LD+L + IIH D+KP+N+LL
Sbjct: 117 VKLFICELVMALDYLQNQ-RIIHRDMKPDNILL 148
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 29.6 bits (65), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 37/152 (24%), Positives = 55/152 (36%), Gaps = 46/152 (30%)
Query: 326 TRQYRCPEVLLG-----SKYSTPADLWSFACICFELATGDVLFDPHSGDN--YDRDEDHL 378
+ +Y PEV+ S Y DLWS I + L +G F G + +DR E
Sbjct: 184 SAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPFVGRCGSDCGWDRGEACP 243
Query: 379 ALMMELLGMMPRKIAFGGRYSRDFFNRHGDLRHIRRLRFWPLNKVLIEKYDFSEKDANDM 438
A M+ I G KY+F +KD +
Sbjct: 244 ACQ----NMLFESIQEG-------------------------------KYEFPDKDWAHI 268
Query: 439 A----DFLVPILDFVPEKRPTAAQCLTHPWIN 466
+ D + +L ++R +AAQ L HPW+
Sbjct: 269 SCAAKDLISKLLVRDAKQRLSAAQVLQHPWVQ 300
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 29.6 bits (65), Expect = 4.0, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 26/157 (16%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDD 102
RY + +G G+F L D Q++ VA+K + + E EI + + +
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPN--- 76
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEY-----LGENLLTLIKYADYRGVPLHMVKEICFH 157
+ FK H+ +V EY L E + ++++ +
Sbjct: 77 -------IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA------RFFFQQ 123
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLLMSMIDPSKDPR 194
++ G+ + H + + H DLK EN LL D S PR
Sbjct: 124 LISGVSYCH-AMQVCHRDLKLENTLL----DGSPAPR 155
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 29.6 bits (65), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 26/157 (16%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDD 102
RY + +G G+F L D Q++ VA+K + + E EI + + +
Sbjct: 20 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPN--- 76
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEY-----LGENLLTLIKYADYRGVPLHMVKEICFH 157
+ FK H+ +V EY L E + ++++ +
Sbjct: 77 -------IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA------RFFFQQ 123
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLLMSMIDPSKDPR 194
++ G+ + H + + H DLK EN LL D S PR
Sbjct: 124 LISGVSYCH-AMQVCHRDLKLENTLL----DGSPAPR 155
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 29.6 bits (65), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Query: 303 LKCKLVDFGNACWTYKQFTNDIQ------TRQYRCPEVLLGSKYSTPADLWSFACICFEL 356
K+ DFG A + K F + T Y PE L G + + +D++SF + E+
Sbjct: 164 FTAKISDFGLARASEK-FAQXVMXXRIVGTTAYMAPEALRG-EITPKSDIYSFGVVLLEI 221
Query: 357 ATGDVLFDPH 366
TG D H
Sbjct: 222 ITGLPAVDEH 231
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 29.6 bits (65), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 13/32 (40%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
Query: 153 EICFHILVGLDHLHRELSIIHTDLKPENVLLM 184
E+ I G+D++H + +IH DLKP N+ L+
Sbjct: 140 ELFEQITKGVDYIHSK-KLIHRDLKPSNIFLV 170
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 11/35 (31%), Positives = 18/35 (51%)
Query: 324 IQTRQYRCPEVLLGSKYSTPADLWSFACICFELAT 358
+ T Y PE + Y+ +D+WS C+ +EL
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCA 211
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 61/144 (42%), Gaps = 14/144 (9%)
Query: 41 NGRYVVQSKLGWGHFSTVWLA-WDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGD 99
+G+ V ++G G F TV+ W + + L V +A +E+ +L++
Sbjct: 23 DGQITVGQRIGSGSFGTVYKGKWHGDVAVKM-LNVTAPTPQQLQAFKNEVGVLRKTRH-- 79
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
V +L +S + +V ++ + L +A + + +I
Sbjct: 80 -------VNILLFMGYS--TAPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 130
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
G+D+LH + SIIH DLK N+ L
Sbjct: 131 RGMDYLHAK-SIIHRDLKSNNIFL 153
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 36/147 (24%), Positives = 66/147 (44%), Gaps = 19/147 (12%)
Query: 42 GRYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYT---EAALDEIKILKQIAEG 98
G Y + +G G+F+ V LA T VA+K+ Q + + E++I+K +
Sbjct: 7 GNYRLLKTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHP 66
Query: 99 DPDDKKCVVKLLDHFKHSGPNGQHVCMVFEYL--GENLLTLIKYADYRGVPLHMVKEICF 156
+ +VKL + + + + +V EY GE L+ + + +
Sbjct: 67 N------IVKLFEVIETE----KTLYLVMEYASGGEVFDYLVAHGWMKE---KEARAKFR 113
Query: 157 HILVGLDHLHRELSIIHTDLKPENVLL 183
I+ + + H++ I+H DLK EN+LL
Sbjct: 114 QIVSAVQYCHQKF-IVHRDLKAENLLL 139
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 324 IQTRQYRCPEVLLGSKYSTPADLWSFACICFELA 357
+ T Y PE + Y+ +D+WS C+ +EL
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 29.6 bits (65), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 11/34 (32%), Positives = 18/34 (52%)
Query: 324 IQTRQYRCPEVLLGSKYSTPADLWSFACICFELA 357
+ T Y PE + Y+ +D+WS C+ +EL
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELC 210
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/71 (28%), Positives = 28/71 (39%), Gaps = 8/71 (11%)
Query: 297 LLAAVDLKCKLVDFGNA-CWTYKQFTNDIQTRQY-------RCPEVLLGSKYSTPADLWS 348
LL++ L DFG+A C + T Y PEV+LG D+WS
Sbjct: 217 LLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVLGRSCDAKVDVWS 276
Query: 349 FACICFELATG 359
C+ + G
Sbjct: 277 SCCMMLHMLNG 287
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 29.3 bits (64), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 10/29 (34%), Positives = 19/29 (65%)
Query: 328 QYRCPEVLLGSKYSTPADLWSFACICFEL 356
++ PE L + +ST +D+WSF + +E+
Sbjct: 170 KWTAPEALREAAFSTKSDVWSFGILLWEI 198
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 29.3 bits (64), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 297 LLAAVDLKCKLVDFGNA-CWTYKQFTNDIQTRQY-------RCPEVLLGSKYSTPADLWS 348
LL++ + L DFG+A C + T Y PEV++G D+WS
Sbjct: 198 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWS 257
Query: 349 FACICFELATG 359
C+ + G
Sbjct: 258 SCCMMLHMLNG 268
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 29.3 bits (64), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 297 LLAAVDLKCKLVDFGNA-CWTYKQFTNDIQTRQY-------RCPEVLLGSKYSTPADLWS 348
LL++ + L DFG+A C + T Y PEV++G D+WS
Sbjct: 182 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWS 241
Query: 349 FACICFELATG 359
C+ + G
Sbjct: 242 SCCMMLHMLNG 252
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 19/71 (26%), Positives = 29/71 (40%), Gaps = 8/71 (11%)
Query: 297 LLAAVDLKCKLVDFGNA-CWTYKQFTNDIQTRQY-------RCPEVLLGSKYSTPADLWS 348
LL++ + L DFG+A C + T Y PEV++G D+WS
Sbjct: 196 LLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWS 255
Query: 349 FACICFELATG 359
C+ + G
Sbjct: 256 SCCMMLHMLNG 266
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 29.3 bits (64), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 36/157 (22%), Positives = 62/157 (39%), Gaps = 26/157 (16%)
Query: 43 RYVVQSKLGWGHFSTVWLAWDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGDPDD 102
RY + +G G+F L D Q++ VA+K + + E EI + + +
Sbjct: 19 RYELVKDIGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPN--- 75
Query: 103 KKCVVKLLDHFKHSGPNGQHVCMVFEY-----LGENLLTLIKYADYRGVPLHMVKEICFH 157
+ FK H+ +V EY L E + ++++ +
Sbjct: 76 -------IVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSEDEA------RFFFQQ 122
Query: 158 ILVGLDHLHRELSIIHTDLKPENVLLMSMIDPSKDPR 194
++ G+ + H + + H DLK EN LL D S PR
Sbjct: 123 LISGVSYCH-AMQVCHRDLKLENTLL----DGSPAPR 154
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 28.9 bits (63), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 33/144 (22%), Positives = 60/144 (41%), Gaps = 14/144 (9%)
Query: 41 NGRYVVQSKLGWGHFSTVWLA-WDTQTSHYVALKVQKSAQHYTEAALDEIKILKQIAEGD 99
+G+ V ++G G F TV+ W + L V +A +E+ +L++
Sbjct: 23 DGQITVGQRIGSGSFGTVYKGKWHGDVA-VKMLNVTAPTPQQLQAFKNEVGVLRKTRH-- 79
Query: 100 PDDKKCVVKLLDHFKHSGPNGQHVCMVFEYLGENLLTLIKYADYRGVPLHMVKEICFHIL 159
V +L +S + +V ++ + L +A + + +I
Sbjct: 80 -------VNILLFMGYS--TKPQLAIVTQWCEGSSLYHHLHASETKFEMKKLIDIARQTA 130
Query: 160 VGLDHLHRELSIIHTDLKPENVLL 183
G+D+LH + SIIH DLK N+ L
Sbjct: 131 RGMDYLHAK-SIIHRDLKSNNIFL 153
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 28.5 bits (62), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 153 EICFHILVGLDHLHRELSIIHTDLKPENVLL 183
EIC GL +LH +IIH D+K N+LL
Sbjct: 143 EICIGAARGLHYLHTR-AIIHRDVKSINILL 172
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 28.5 bits (62), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)
Query: 153 EICFHILVGLDHLHRELSIIHTDLKPENVLL 183
EIC GL +LH +IIH D+K N+LL
Sbjct: 143 EICIGAARGLHYLHTR-AIIHRDVKSINILL 172
>pdb|1X8B|A Chain A, Structure Of Human Wee1a Kinase: Kinase Domain Complexed
With Inhibitor Pd0407824
Length = 289
Score = 28.5 bits (62), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 151 VKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+K++ + GL ++H +S++H D+KP N+ +
Sbjct: 117 LKDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFI 148
>pdb|2Z2W|A Chain A, Humand Wee1 Kinase Complexed With Inhibitor Pf0335770
Length = 285
Score = 28.5 bits (62), Expect = 10.0, Method: Compositional matrix adjust.
Identities = 10/33 (30%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 151 VKEICFHILVGLDHLHRELSIIHTDLKPENVLL 183
+K++ + GL ++H +S++H D+KP N+ +
Sbjct: 113 LKDLLLQVGRGLRYIH-SMSLVHMDIKPSNIFI 144
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.136 0.415
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 16,637,690
Number of Sequences: 62578
Number of extensions: 712478
Number of successful extensions: 3892
Number of sequences better than 100.0: 908
Number of HSP's better than 100.0 without gapping: 523
Number of HSP's successfully gapped in prelim test: 385
Number of HSP's that attempted gapping in prelim test: 1805
Number of HSP's gapped (non-prelim): 1911
length of query: 530
length of database: 14,973,337
effective HSP length: 103
effective length of query: 427
effective length of database: 8,527,803
effective search space: 3641371881
effective search space used: 3641371881
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 54 (25.4 bits)