BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045989
(295 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 159 bits (403), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 134/225 (59%), Gaps = 4/225 (1%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEV 62
LS H ++V L+G C E +L+Y+++ NG+L ++++ + ++WE RL I +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 63 SGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSR-SMAVDRTHLTTQVKGTF 121
+ L YLH+ A I HRD+KS NILLD+ + KI+DFG S+ +D+THL VKGT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTL 205
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRL 181
GY+DPEYF + TEKSDVYSFGVVL E+L + I E +LA + ++ N +L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 182 FEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+++D + + E + A +CL L+ + RP+M +V +L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 157 bits (396), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 133/225 (59%), Gaps = 4/225 (1%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEV 62
LS H ++V L+G C E +L+Y+++ NG+L ++++ + ++WE RL I +
Sbjct: 89 LSFCRHPHLVSLIGFCDERNEMILIYKYMENGNLKRHLYGSDLPTMSMSWEQRLEICIGA 148
Query: 63 SGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSR-SMAVDRTHLTTQVKGTF 121
+ L YLH+ A I HRD+KS NILLD+ + KI+DFG S+ + +THL VKGT
Sbjct: 149 ARGLHYLHTRA---IIHRDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTL 205
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRL 181
GY+DPEYF + TEKSDVYSFGVVL E+L + I E +LA + ++ N +L
Sbjct: 206 GYIDPEYFIKGRLTEKSDVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQL 265
Query: 182 FEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+++D + + E + A +CL L+ + RP+M +V +L
Sbjct: 266 EQIVDPNLADKIRPESLRKFGDTAVKCLALSSEDRPSMGDVLWKL 310
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 152 bits (384), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 80/229 (34%), Positives = 131/229 (57%), Gaps = 2/229 (0%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S HRN+++L G C+ LLVY ++ NGS+ + E+ E Q P+ W R IA+
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L+YLH I HRD+K+ANILLD+++ A + DFG ++ M H+ V+GT
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVE--TEENRSLAAYFLQVINEN 179
G++ PEY + + +EK+DV+ +GV+L+EL+TGQ+ L +++ L + ++ E
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 180 RLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAG 228
+L ++D + + EEV + VA C + +RP M EV L G
Sbjct: 268 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 150 bits (379), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/229 (34%), Positives = 131/229 (57%), Gaps = 2/229 (0%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S HRN+++L G C+ LLVY ++ NGS+ + E+ E Q P+ W R IA+
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L+YLH I HRD+K+ANILLD+++ A + DFG ++ M H+ V+G
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRL--VETEENRSLAAYFLQVINEN 179
G++ PEY + + +EK+DV+ +GV+L+EL+TGQ+ L + +++ L + ++ E
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 180 RLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAG 228
+L ++D + + EEV + VA C + +RP M EV L G
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 122 bits (307), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 132/236 (55%), Gaps = 16/236 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++++ H N+V+LLG + + LVY ++PNGSL + + P++W +R IA
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQG 141
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSR-SMAVDRTHLTTQVKGT 120
+ +++LH I HRDIKSANILLD+ + AKISDFG +R S +T + +++ GT
Sbjct: 142 AANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGT 198
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRS----LAAYFLQVI 176
Y+ PE + + T KSD+YSFGVVL+E++TG L +E+R L
Sbjct: 199 TAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKEEIED 252
Query: 177 NENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRAS 232
E + + +D + + +A+ V + VA +CL+ KRP +K+V L + AS
Sbjct: 253 EEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 122 bits (305), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 83/236 (35%), Positives = 131/236 (55%), Gaps = 16/236 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++++ H N+V+LLG + + LVY ++PNGSL + + P++W +R IA
Sbjct: 83 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQG 141
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSR-SMAVDRTHLTTQVKGT 120
+ +++LH I HRDIKSANILLD+ + AKISDFG +R S +T + ++ GT
Sbjct: 142 AANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGT 198
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRS----LAAYFLQVI 176
Y+ PE + + T KSD+YSFGVVL+E++TG L +E+R L
Sbjct: 199 TAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKEEIED 252
Query: 177 NENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRAS 232
E + + +D + + +A+ V + VA +CL+ KRP +K+V L + AS
Sbjct: 253 EEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 307
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 120 bits (300), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 82/236 (34%), Positives = 130/236 (55%), Gaps = 16/236 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++++ H N+V+LLG + + LVY ++PNGSL + + P++W +R IA
Sbjct: 77 VMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLDGTPPLSWHMRCKIAQG 135
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSR-SMAVDRTHLTTQVKGT 120
+ +++LH I HRDIKSANILLD+ + AKISDFG +R S + + ++ GT
Sbjct: 136 AANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGT 192
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRS----LAAYFLQVI 176
Y+ PE + + T KSD+YSFGVVL+E++TG L +E+R L
Sbjct: 193 TAYMAPEALR-GEITPKSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKEEIED 246
Query: 177 NENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRAS 232
E + + +D + + +A+ V + VA +CL+ KRP +K+V L + AS
Sbjct: 247 EEKTIEDYIDKK-MNDADSTSVEAMYSVASQCLHEKKNKRPDIKKVQQLLQEMTAS 301
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 112 bits (280), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 120/226 (53%), Gaps = 16/226 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+ ++ H N+V+LLG + + LVY + PNGSL + + P++W R IA
Sbjct: 74 VXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPPLSWHXRCKIAQG 132
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSR-SMAVDRTHLTTQVKGT 120
+ +++LH I HRDIKSANILLD+ + AKISDFG +R S + +++ GT
Sbjct: 133 AANGINFLHENHHI---HRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGT 189
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRS----LAAYFLQVI 176
Y PE + + T KSD+YSFGVVL+E++TG L +E+R L
Sbjct: 190 TAYXAPEALR-GEITPKSDIYSFGVVLLEIITG-----LPAVDEHREPQLLLDIKEEIED 243
Query: 177 NENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E + + +D + +A+ V VA +CL+ KRP +K+V
Sbjct: 244 EEKTIEDYIDKKX-NDADSTSVEAXYSVASQCLHEKKNKRPDIKKV 288
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 104 bits (259), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 97/170 (57%), Gaps = 20/170 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+ + + H N++ L G CL+ LV EF G L++ + + I +I + AV+
Sbjct: 59 LFAMLKHPNIIALRGVCLKEPNLCLVMEFARGGPLNRVLSGKR-----IPPDILVNWAVQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRA--------KISDFGTSRSMAVDRTHL 113
++ ++YLH A +PI HRD+KS+NIL+ K KI+DFG +R H
Sbjct: 114 IARGMNYLHDEAIVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREW-----HR 168
Query: 114 TTQVK--GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVE 161
TT++ G + ++ PE ++S F++ SDV+S+GV+L ELLTG+ P R ++
Sbjct: 169 TTKMSAAGAYAWMAPEVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGID 218
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPI-TWEIRLGIAVE 61
LS++NH N+VKL G CL LV E+ GSL+ +H + LP T + ++
Sbjct: 56 LSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILL-DDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
S ++YLHS + HRD+K N+LL KI DFGT+ + +TH+T KG+
Sbjct: 112 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGS 167
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENR 180
++ PE F+ S ++EK DV+S+G++L E++T +KP + R + A V N R
Sbjct: 168 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA----VHNGTR 223
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+++ K + + RC + + +RP+M+E+
Sbjct: 224 ------PPLIKNLPK----PIESLMTRCWSKDPSQRPSMEEI 255
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 103 bits (256), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 71/222 (31%), Positives = 116/222 (52%), Gaps = 24/222 (10%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPI-TWEIRLGIAVE 61
LS++NH N+VKL G CL LV E+ GSL+ +H + LP T + ++
Sbjct: 55 LSRVNHPNIVKLYGACLNPVC--LVMEYAEGGSLYNVLH--GAEPLPYYTAAHAMSWCLQ 110
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILL-DDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
S ++YLHS + HRD+K N+LL KI DFGT+ + +TH+T KG+
Sbjct: 111 CSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGS 166
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENR 180
++ PE F+ S ++EK DV+S+G++L E++T +KP + R + A V N R
Sbjct: 167 AAWMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWA----VHNGTR 222
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+++ K + + RC + + +RP+M+E+
Sbjct: 223 ------PPLIKNLPK----PIESLMTRCWSKDPSQRPSMEEI 254
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 140
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQ 116
++V+ + +L AS HRD+ + N +LD+K+ K++DFG +R M D H T
Sbjct: 141 LQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTG 197
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 198 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 253
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 88 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 144
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQ 116
++V+ + +L AS HRD+ + N +LD+K+ K++DFG +R M D H T
Sbjct: 145 LQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG 201
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 202 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 257
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 139
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQ 116
++V+ + +L AS HRD+ + N +LD+K+ K++DFG +R M D H T
Sbjct: 140 LQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG 196
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 197 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 252
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 142 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 198
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQ 116
++V+ + +L AS HRD+ + N +LD+K+ K++DFG +R M D H T
Sbjct: 199 LQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG 255
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 256 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 311
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 102 bits (255), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 137
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQ 116
++V+ + +L AS HRD+ + N +LD+K+ K++DFG +R M D H T
Sbjct: 138 LQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG 194
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 195 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 250
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 84 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 140
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQ 116
++V+ + +L AS HRD+ + N +LD+K+ K++DFG +R M D H T
Sbjct: 141 LQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG 197
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 198 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 253
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 102 bits (254), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 99/179 (55%), Gaps = 14/179 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 139
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQ 116
++V+ + +L AS HRD+ + N +LD+K+ K++DFG +R M D H T
Sbjct: 140 LQVAKGMKFL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTG 196
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 197 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 252
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 102 bits (253), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 58/160 (36%), Positives = 91/160 (56%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH-----EQTEDQLPITWEIRL 56
I+ ++ H N+V +G + +V E++ GSL++ +H EQ +++ RL
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR------RL 140
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+A +V+ ++YLH+ + PI HRD+KS N+L+D KY K+ DFG SR + +
Sbjct: 141 SMAYDVAKGMNYLHNR-NPPIVHRDLKSPNLLVDKKYTVKVCDFGLSR-LKASXFLXSKX 198
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE + EKSDVYSFGV+L EL T Q+P
Sbjct: 199 AAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 101 bits (252), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 60/161 (37%), Positives = 95/161 (59%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH-----EQTEDQLPITWEIRL 56
I+ ++ H N+V +G + +V E++ GSL++ +H EQ +++ RL
Sbjct: 87 IMKRLRHPNIVLFMGAVTQPPNLSIVTEYLSRGSLYRLLHKSGAREQLDERR------RL 140
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+A +V+ ++YLH+ + PI HR++KS N+L+D KY K+ DFG SR A T L+++
Sbjct: 141 SMAYDVAKGMNYLHNR-NPPIVHRNLKSPNLLVDKKYTVKVCDFGLSRLKA--STFLSSK 197
Query: 117 -VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE + EKSDVYSFGV+L EL T Q+P
Sbjct: 198 SAAGTPEWMAPEVLRDEPSNEKSDVYSFGVILWELATLQQP 238
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 101 bits (251), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 64/179 (35%), Positives = 98/179 (54%), Gaps = 14/179 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 138
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQ 116
++V+ + YL AS HRD+ + N +LD+K+ K++DFG +R M H T
Sbjct: 139 LQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTG 195
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 196 AKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 251
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 29/239 (12%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 102 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 158
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR----THLTT 115
++V+ + YL AS HRD+ + N +LD+K+ K++DFG +R M D+ H T
Sbjct: 159 LQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKT 214
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 215 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 271
Query: 175 VINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRASI 233
RL + E + + V + +C + + RP+ E+ ++ I ++
Sbjct: 272 ---GRRLLQ-------PEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFSTF 317
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 100 bits (249), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 29/239 (12%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 101 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 157
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR----THLTT 115
++V+ + YL AS HRD+ + N +LD+K+ K++DFG +R M D+ H T
Sbjct: 158 LQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKT 213
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 214 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 270
Query: 175 VINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRASI 233
RL + E + + V + +C + + RP+ E+ ++ I ++
Sbjct: 271 ---GRRLLQ-------PEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFSTF 316
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 16/180 (8%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 80 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 136
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR----THLTT 115
++V+ + YL AS HRD+ + N +LD+K+ K++DFG +R M D+ H T
Sbjct: 137 LQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKT 192
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 193 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 249
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 29/239 (12%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 139
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR----THLTT 115
++V+ + YL AS HRD+ + N +LD+K+ K++DFG +R M D+ H T
Sbjct: 140 LQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKT 195
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 252
Query: 175 VINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRASI 233
RL + E + + V + +C + + RP+ E+ ++ I ++
Sbjct: 253 ---GRRLLQ-------PEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFSTF 298
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 16/180 (8%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 83 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 139
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR----THLTT 115
++V+ + YL AS HRD+ + N +LD+K+ K++DFG +R M D+ H T
Sbjct: 140 LQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKT 195
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 196 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 252
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 100 bits (249), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 65/180 (36%), Positives = 100/180 (55%), Gaps = 16/180 (8%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 75 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 131
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR----THLTT 115
++V+ + YL AS HRD+ + N +LD+K+ K++DFG +R M D+ H T
Sbjct: 132 LQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKT 187
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 188 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 244
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 29/239 (12%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 82 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 138
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR----THLTT 115
++V+ + YL AS HRD+ + N +LD+K+ K++DFG +R M D+ H T
Sbjct: 139 LQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKT 194
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 195 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 251
Query: 175 VINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRASI 233
RL + E + + V + +C + + RP+ E+ ++ I ++
Sbjct: 252 ---GRRLLQ-------PEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFSTF 297
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 29/239 (12%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 78 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 134
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR----THLTT 115
++V+ + YL AS HRD+ + N +LD+K+ K++DFG +R M D+ H T
Sbjct: 135 LQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKT 190
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 191 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 247
Query: 175 VINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRASI 233
RL + E + + V + +C + + RP+ E+ ++ I ++
Sbjct: 248 ---GRRLLQ-------PEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFSTF 293
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 100 bits (248), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 122/239 (51%), Gaps = 29/239 (12%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
II+ +H NV+ LLG CL +E PL+V ++ +G L +I +T + T + +G
Sbjct: 81 IIMKDFSHPNVLSLLGICLRSEGSPLVVLPYMKHGDLRNFIRNETHNP---TVKDLIGFG 137
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR----THLTT 115
++V+ + YL AS HRD+ + N +LD+K+ K++DFG +R M D+ H T
Sbjct: 138 LQVAKGMKYL---ASKKFVHRDLAARNCMLDEKFTVKVADFGLARDM-YDKEYYSVHNKT 193
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQ 174
K ++ E Q+ +FT KSDV+SFGV+L EL+T G P V T + + Y LQ
Sbjct: 194 GAKLPVKWMALESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVNTFD---ITVYLLQ 250
Query: 175 VINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRASI 233
RL + E + + V + +C + + RP+ E+ ++ I ++
Sbjct: 251 ---GRRLLQ-------PEYCPDPLYEVML---KCWHPKAEMRPSFSELVSRISAIFSTF 296
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 99.0 bits (245), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/235 (30%), Positives = 118/235 (50%), Gaps = 32/235 (13%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
I+S +NH N+VKL G L P +V EF+P G L+ H + PI W ++L + +
Sbjct: 75 FIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLY---HRLLDKAHPIKWSVKLRLML 129
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILL-----DDKYRAKISDFGTSRSMAVDRTHLTT 115
+++ + Y+ + + PI HRD++S NI L + AK++DFGTS+ H +
Sbjct: 130 DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQQ----SVHSVS 184
Query: 116 QVKGTFGYLDPEYFQSSQ--FTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFL 173
+ G F ++ PE + + +TEK+D YSF ++L +LTG+ P +E F+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF-----DEYSYGKIKFI 239
Query: 174 QVINENRLFEVLDAQVLREAEKEEVIT-VAMVAKRCLNLNGKKRPTMKEVALELA 227
+I E + LR E+ + V + C + + KKRP + EL+
Sbjct: 240 NMIRE---------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 96.7 bits (239), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 70/235 (29%), Positives = 117/235 (49%), Gaps = 32/235 (13%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
I+S +NH N+VKL G L P +V EF+P G L+ H + PI W ++L + +
Sbjct: 75 FIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLY---HRLLDKAHPIKWSVKLRLML 129
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILL-----DDKYRAKISDFGTSRSMAVDRTHLTT 115
+++ + Y+ + + PI HRD++S NI L + AK++DFG S+ H +
Sbjct: 130 DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQQ----SVHSVS 184
Query: 116 QVKGTFGYLDPEYFQSSQ--FTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFL 173
+ G F ++ PE + + +TEK+D YSF ++L +LTG+ P +E F+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF-----DEYSYGKIKFI 239
Query: 174 QVINENRLFEVLDAQVLREAEKEEVIT-VAMVAKRCLNLNGKKRPTMKEVALELA 227
+I E + LR E+ + V + C + + KKRP + EL+
Sbjct: 240 NMIRE---------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 72/249 (28%), Positives = 118/249 (47%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ EF+P GSL +Y+ + E D + + L
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKL-----LQ 121
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 122 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 179 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 229
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 230 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 290 DQIRDNMAG 298
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 95.9 bits (237), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 119/253 (47%), Gaps = 32/253 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 68 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 122
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 123 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 179
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 180 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 230
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 231 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 290
Query: 227 AGIRASIGASVLR 239
IR ++ V R
Sbjct: 291 DQIRDNMAGLVPR 303
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 23/232 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +++H +V+L G CLE LV+EF+ +G L Y+ Q + E LG+ ++
Sbjct: 55 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLD 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V ++YL A+ I HRD+ + N L+ + K+SDFG +R + D+ +T K
Sbjct: 112 VCEGMAYLEEASVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 168
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE F S+++ KSDV+SFGV++ E+ + G+ P ENRS + + R
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY------ENRSNSEVVEDISTGFR 222
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRAS 232
L++ A V + C + RP + +LA I AS
Sbjct: 223 LYKPRLAST----------HVYQIMNHCWKERPEDRPAFSRLLRQLAAIAAS 264
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 118
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 119 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKE 175
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 176 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 226
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 227 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 287 DQIRDNMAG 295
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 94.7 bits (234), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 117/235 (49%), Gaps = 32/235 (13%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
I+S +NH N+VKL G L P +V EF+P G L+ H + PI W ++L + +
Sbjct: 75 FIMSNLNHPNIVKLYG--LMHNPPRMVMEFVPCGDLY---HRLLDKAHPIKWSVKLRLML 129
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILL-----DDKYRAKISDFGTSRSMAVDRTHLTT 115
+++ + Y+ + + PI HRD++S NI L + AK++DF S++ H +
Sbjct: 130 DIALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADF----SLSQQSVHSVS 184
Query: 116 QVKGTFGYLDPEYFQSSQ--FTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFL 173
+ G F ++ PE + + +TEK+D YSF ++L +LTG+ P +E F+
Sbjct: 185 GLLGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPF-----DEYSYGKIKFI 239
Query: 174 QVINENRLFEVLDAQVLREAEKEEVIT-VAMVAKRCLNLNGKKRPTMKEVALELA 227
+I E + LR E+ + V + C + + KKRP + EL+
Sbjct: 240 NMIRE---------EGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 118
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 119 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 176 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 226
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 227 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 287 DQIRDNMAG 295
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 94.0 bits (232), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 64 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 118
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 119 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 175
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 176 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 226
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 227 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 286
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 287 DQIRDNMAG 295
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 121
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 122 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 179 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 229
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 230 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 290 DQIRDNMAG 298
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 70 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 124
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 125 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 181
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 182 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 232
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 233 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 292
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 293 DQIRDNMAG 301
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 94.0 bits (232), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 69 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 123
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 124 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 180
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 181 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 231
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 232 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 291
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 292 DQIRDNMAG 300
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 71 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 125
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 126 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 182
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 183 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 233
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 234 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 293
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 294 DQIRDNMAG 302
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 117/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 136
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 137 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 193
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 194 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 244
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 245 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 304
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 305 DQIRDNMAG 313
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 117/248 (47%), Gaps = 32/248 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 63 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 117
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 118 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 174
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 175 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 225
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 226 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 285
Query: 227 AGIRASIG 234
IR ++
Sbjct: 286 DQIRDNMA 293
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 62 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 116
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 117 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 173
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 174 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 224
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 225 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 284
Query: 227 AGIRASIGA 235
IR +
Sbjct: 285 DQIRDQMAG 293
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 95 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 149
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 150 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 206
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 207 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 257
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 258 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 317
Query: 227 AGIRASIGA 235
IR +
Sbjct: 318 DQIRDQMAG 326
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 118/249 (47%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 65 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 119
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HR++ + NIL++++ R KI DFG ++ + D+ + +
Sbjct: 120 YTSQICKGMEYLGTKRYI---HRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKE 176
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 177 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 227
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 228 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 287
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 288 DQIRDNMAG 296
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/247 (28%), Positives = 117/247 (47%), Gaps = 32/247 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ + E D + + L
Sbjct: 82 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKL-----LQ 136
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 137 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 193
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 194 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 244
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 245 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 304
Query: 227 AGIRASI 233
IR ++
Sbjct: 305 DQIRDNM 311
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 93.2 bits (230), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 71/249 (28%), Positives = 116/249 (46%), Gaps = 32/249 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTE--DQLPITWEIRLG 57
IL + H N+VK G C L+ E++P GSL Y+ E D + + L
Sbjct: 67 ILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKL-----LQ 121
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YL + I HRD+ + NIL++++ R KI DFG ++ + D+ +
Sbjct: 122 YTSQICKGMEYLGTKRYI---HRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKE 178
Query: 118 KG---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
G F Y PE S+F+ SDV+SFGVVL EL T E+++S A F++
Sbjct: 179 PGESPIFWYA-PESLTESKFSVASDVWSFGVVLYELFT--------YIEKSKSPPAEFMR 229
Query: 175 VINENR--------LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALEL 226
+I ++ L E+L + M+ C N N +RP+ +++AL +
Sbjct: 230 MIGNDKQGQMIVFHLIELLKNNGRLPRPDGCPDEIYMIMTECWNNNVNQRPSFRDLALRV 289
Query: 227 AGIRASIGA 235
IR ++
Sbjct: 290 DQIRDNMAG 298
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 92.4 bits (228), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +++H +V+L G CLE LV+EF+ +G L Y+ Q + E LG+ ++
Sbjct: 53 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLD 109
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V ++YL A I HRD+ + N L+ + K+SDFG +R + D+ +T K
Sbjct: 110 VCEGMAYLEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 166
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE F S+++ KSDV+SFGV++ E+ + G+ P ENRS + + R
Sbjct: 167 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY------ENRSNSEVVEDISTGFR 220
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRAS 232
L++ A V + C + RP + +LA I S
Sbjct: 221 LYKPRLAST----------HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 262
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +++H +V+L G CLE LV+EF+ +G L Y+ Q + E LG+ ++
Sbjct: 55 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLD 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V ++YL A I HRD+ + N L+ + K+SDFG +R + D+ +T K
Sbjct: 112 VCEGMAYLEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 168
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE F S+++ KSDV+SFGV++ E+ + G+ P ENRS + + R
Sbjct: 169 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY------ENRSNSEVVEDISTGFR 222
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRAS 232
L++ A V + C + RP + +LA I S
Sbjct: 223 LYKPRLAST----------HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 264
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +++H +V+L G CLE LV+EF+ +G L Y+ Q + E LG+ ++
Sbjct: 58 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLD 114
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V ++YL A I HRD+ + N L+ + K+SDFG +R + D+ +T K
Sbjct: 115 VCEGMAYLEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 171
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE F S+++ KSDV+SFGV++ E+ + G+ P ENRS + + R
Sbjct: 172 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY------ENRSNSEVVEDISTGFR 225
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRAS 232
L++ A V + C + RP + +LA I S
Sbjct: 226 LYKPRLAST----------HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 267
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 92.0 bits (227), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 23/232 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +++H +V+L G CLE LV+EF+ +G L Y+ Q + E LG+ ++
Sbjct: 75 VMMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLD 131
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V ++YL A I HRD+ + N L+ + K+SDFG +R + D+ +T K
Sbjct: 132 VCEGMAYLEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 188
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE F S+++ KSDV+SFGV++ E+ + G+ P ENRS + + R
Sbjct: 189 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY------ENRSNSEVVEDISTGFR 242
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRAS 232
L++ A V + C + RP + +LA I S
Sbjct: 243 LYKPRLAST----------HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAES 284
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 111/234 (47%), Gaps = 35/234 (14%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+I++ ++H ++V+LLG CL + LV + +P+G L +Y+HE ++ I ++ L V
Sbjct: 69 LIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDN---IGSQLLLNWCV 124
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ-VKG 119
+++ + YL + HRD+ + N+L+ KI+DFG +R + D K
Sbjct: 125 QIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 181
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINE 178
++ E +FT +SDV+S+GV + EL+T G KP + T E L
Sbjct: 182 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL---------- 231
Query: 179 NRLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
L + E+ I V MV +C ++ RP KE+A E +
Sbjct: 232 -----------LEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 274
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 23/232 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +++H +V+L G CLE LV EF+ +G L Y+ Q + E LG+ ++
Sbjct: 56 VMMKLSHPKLVQLYGVCLEQAPICLVTEFMEHGCLSDYLRTQ---RGLFAAETLLGMCLD 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V ++YL A I HRD+ + N L+ + K+SDFG +R + D+ +T K
Sbjct: 113 VCEGMAYLEEACVI---HRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPV 169
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE F S+++ KSDV+SFGV++ E+ + G+ P ENRS + + R
Sbjct: 170 KWASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPY------ENRSNSEVVEDISTGFR 223
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRAS 232
L++ A V + C + RP + +LA I S
Sbjct: 224 LYKPRLAST----------HVYQIMNHCWRERPEDRPAFSRLLRQLAEIAES 265
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 90.1 bits (222), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 63/229 (27%), Positives = 111/229 (48%), Gaps = 25/229 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+I++ ++H ++V+LLG CL + LV + +P+G L +Y+HE ++ I ++ L V
Sbjct: 92 LIMASMDHPHLVRLLGVCLSPTI-QLVTQLMPHGCLLEYVHEHKDN---IGSQLLLNWCV 147
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ-VKG 119
+++ + YL + HRD+ + N+L+ KI+DFG +R + D K
Sbjct: 148 QIAKGMMYLEERR---LVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKM 204
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINE 178
++ E +FT +SDV+S+GV + EL+T G KP + T E
Sbjct: 205 PIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTRE-------------- 250
Query: 179 NRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+ ++L+ I V MV +C ++ RP KE+A E +
Sbjct: 251 --IPDLLEKGERLPQPPICTIDVYMVMVKCWMIDADSRPKFKELAAEFS 297
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/166 (31%), Positives = 97/166 (58%), Gaps = 10/166 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I+ Q+++ +V+L+G C + E +LV E G LH+++ + E ++P++ L +
Sbjct: 63 IMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAEL--LHQ 118
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
VS + YL + HRD+ + N+LL +++ AKISDFG S+++ D ++ T + G +
Sbjct: 119 VSMGMKYLEEKNFV---HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 175
Query: 122 --GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ PE +F+ +SDV+S+GV + E L+ GQKP + ++ E
Sbjct: 176 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 89.4 bits (220), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQ 117
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 118 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDPSQ 218
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
++E+L+ E + V + + C N RP+ E+
Sbjct: 219 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 89.0 bits (219), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQ 117
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 118 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 174
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDPSQ 218
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 219 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 278
Query: 239 RQ 240
++
Sbjct: 279 KE 280
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 88.6 bits (218), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 60 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQ 117
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 118 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPI 174
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 175 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDPSQ 218
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 219 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 278
Query: 239 RQ 240
++
Sbjct: 279 KE 280
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQ 119
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 120 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 220
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 280
Query: 239 RQ 240
++
Sbjct: 281 KE 282
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 121
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 122 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI 178
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 222
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 223 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 282
Query: 239 RQ 240
++
Sbjct: 283 KE 284
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 88.2 bits (217), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 120
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 121 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPI 177
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 221
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 222 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 281
Query: 239 RQ 240
++
Sbjct: 282 KE 283
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQ 119
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 120 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 220
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 280
Query: 239 RQ 240
++
Sbjct: 281 KE 282
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 124
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 125 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 181
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 225
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
++E+L+ E + V + + C N RP+ E+
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQ 119
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 120 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 220
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 280
Query: 239 RQ 240
++
Sbjct: 281 KE 282
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 63 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 120
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 121 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPI 177
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 178 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 221
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 222 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 281
Query: 239 RQ 240
++
Sbjct: 282 KE 283
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 87.8 bits (216), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQ 124
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 125 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 225
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 285
Query: 239 RQ 240
++
Sbjct: 286 KE 287
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQ 119
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 120 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 220
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 280
Query: 239 RQ 240
++
Sbjct: 281 KE 282
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 87.8 bits (216), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 75 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 132
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 133 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 189
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 190 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 233
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 234 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 293
Query: 239 RQ 240
++
Sbjct: 294 KE 295
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 121
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 122 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 222
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 223 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 282
Query: 239 RQ 240
++
Sbjct: 283 KE 284
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 119
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 120 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 220
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
++E+L+ E + V + + C N RP+ E+
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 62 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 119
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 120 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 176
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 177 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 220
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
++E+L+ E + V + + C N RP+ E+
Sbjct: 221 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 87.4 bits (215), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 124
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 125 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 225
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
++E+L+ E + V + + C N RP+ E+
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 66 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 123
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 124 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 180
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 181 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 224
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
++E+L+ E + V + + C N RP+ E+
Sbjct: 225 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 64 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 121
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 122 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 178
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 179 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 222
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 223 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 282
Query: 239 RQ 240
++
Sbjct: 283 KE 284
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 65/242 (26%), Positives = 112/242 (46%), Gaps = 24/242 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 124
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 125 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 225
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV--ALELAGIRASIGASVL 238
++E+L+ E + V + + C N RP+ E+ A E +SI V
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEIHQAFETMFQESSISDEVE 285
Query: 239 RQ 240
++
Sbjct: 286 KE 287
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 87.4 bits (215), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 67 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 124
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 125 ISSAMEYLEKKNFI---HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 181
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 182 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 225
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
++E+L+ E + V + + C N RP+ E+
Sbjct: 226 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 80/153 (52%), Gaps = 7/153 (4%)
Query: 4 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVS 63
SQ++H+N+V ++ E + LV E+I +L +YI E P++ + + ++
Sbjct: 66 SQLSHQNIVSMIDVDEEDDCYYLVMEYIEGPTLSEYI----ESHGPLSVDTAINFTNQIL 121
Query: 64 GALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
+ + H + I HRDIK NIL+D KI DFG +++++ T V GT Y
Sbjct: 122 DGIKHAHD---MRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQY 178
Query: 124 LDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
PE + E +D+YS G+VL E+L G+ P
Sbjct: 179 FSPEQAKGEATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 86.7 bits (213), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/156 (33%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C +V E++P G+L Y+ E ++ +T + L +A +
Sbjct: 81 VMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYLRECNREE--VTAVVLLYMATQ 138
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HRD+ + N L+ + + K++DFG SR M D K
Sbjct: 139 ISSAMEYLEKKNFI---HRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPI 195
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE + F+ KSDV++FGV+L E+ T G P
Sbjct: 196 KWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSP 231
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 52/166 (31%), Positives = 97/166 (58%), Gaps = 10/166 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I+ Q+++ +V+L+G C + E +LV E G LH+++ + E ++P++ L +
Sbjct: 389 IMHQLDNPYIVRLIGVC-QAEALMLVMEMAGGGPLHKFLVGKRE-EIPVSNVAEL--LHQ 444
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
VS + YL + HR++ + N+LL +++ AKISDFG S+++ D ++ T + G +
Sbjct: 445 VSMGMKYLEEKNFV---HRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKW 501
Query: 122 G--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ PE +F+ +SDV+S+GV + E L+ GQKP + ++ E
Sbjct: 502 PLKWYAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
++ Q+++ +V+++G C E E +LV E G L++Y+ + +D+ I +
Sbjct: 61 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE------LV 113
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+VS + YL + + HRD+ + N+LL ++ AKISDFG S+++ D + Q G
Sbjct: 114 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 170
Query: 120 TF--GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + PE +F+ KSDV+SFGV++ E + GQKP R ++ E
Sbjct: 171 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
++ Q+++ +V+++G C E E +LV E G L++Y+ + +D+ I +
Sbjct: 71 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE------LV 123
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+VS + YL + + HRD+ + N+LL ++ AKISDFG S+++ D + Q G
Sbjct: 124 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 180
Query: 120 TF--GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + PE +F+ KSDV+SFGV++ E + GQKP R ++ E
Sbjct: 181 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 228
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
++ Q+++ +V+++G C E E +LV E G L++Y+ + +D+ I +
Sbjct: 59 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE------LV 111
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+VS + YL + + HRD+ + N+LL ++ AKISDFG S+++ D + Q G
Sbjct: 112 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 168
Query: 120 TF--GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + PE +F+ KSDV+SFGV++ E + GQKP R ++ E
Sbjct: 169 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 86.3 bits (212), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
++ Q+++ +V+++G C E E +LV E G L++Y+ + +D+ I +
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE------LV 117
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+VS + YL + + HRD+ + N+LL ++ AKISDFG S+++ D + Q G
Sbjct: 118 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 174
Query: 120 TF--GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + PE +F+ KSDV+SFGV++ E + GQKP R ++ E
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
++ Q+++ +V+++G C E E +LV E G L++Y+ + +D+ I +
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE------LV 133
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+VS + YL + + HRD+ + N+LL ++ AKISDFG S+++ D + Q G
Sbjct: 134 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 120 TF--GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + PE +F+ KSDV+SFGV++ E + GQKP R ++ E
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
++ Q+++ +V+++G C E E +LV E G L++Y+ + +D+ I +
Sbjct: 81 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE------LV 133
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+VS + YL + + HRD+ + N+LL ++ AKISDFG S+++ D + Q G
Sbjct: 134 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 190
Query: 120 TF--GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + PE +F+ KSDV+SFGV++ E + GQKP R ++ E
Sbjct: 191 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 85.5 bits (210), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
++ Q+++ +V+++G C E E +LV E G L++Y+ + +D+ I +
Sbjct: 79 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE------LV 131
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+VS + YL + + HRD+ + N+LL ++ AKISDFG S+++ D + Q G
Sbjct: 132 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 188
Query: 120 TF--GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + PE +F+ KSDV+SFGV++ E + GQKP R ++ E
Sbjct: 189 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 236
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 20/181 (11%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
IL + H N+VK G C E L+ EF+P+GSL +Y+ +++ I + +L A
Sbjct: 76 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYA 132
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ--- 116
V++ + YL S + HRD+ + N+L++ +++ KI DFG ++++ D+ T +
Sbjct: 133 VQICKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 189
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI 176
F Y PE S+F SDV+SFGV L ELLT + + S A FL++I
Sbjct: 190 DSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELLT--------YCDSDSSPMALFLKMI 240
Query: 177 N 177
Sbjct: 241 G 241
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 92/168 (54%), Gaps = 15/168 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
++ Q+++ +V+++G C E E +LV E G L++Y+ + +D+ I +
Sbjct: 65 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE------LV 117
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+VS + YL + + HRD+ + N+LL ++ AKISDFG S+++ D Q G
Sbjct: 118 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHG 174
Query: 120 TF--GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + PE +F+ KSDV+SFGV++ E + GQKP R ++ E
Sbjct: 175 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 84.7 bits (208), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 269 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAV--VLLYMATQ 326
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HR++ + N L+ + + K++DFG SR M D K
Sbjct: 327 ISSAMEYLEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 383
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 384 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 427
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
++E+L+ E + V + + C N RP+ E+
Sbjct: 428 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 84.7 bits (208), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 59/181 (32%), Positives = 95/181 (52%), Gaps = 20/181 (11%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
IL + H N+VK G C E L+ EF+P+GSL +Y+ +++ I + +L A
Sbjct: 64 ILRNLYHENIVKYKGICTEDGGNGIKLIMEFLPSGSLKEYL---PKNKNKINLKQQLKYA 120
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ--- 116
V++ + YL S + HRD+ + N+L++ +++ KI DFG ++++ D+ T +
Sbjct: 121 VQICKGMDYLGSRQYV---HRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDR 177
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI 176
F Y PE S+F SDV+SFGV L ELLT + + S A FL++I
Sbjct: 178 DSPVFWYA-PECLMQSKFYIASDVWSFGVTLHELLT--------YCDSDSSPMALFLKMI 228
Query: 177 N 177
Sbjct: 229 G 229
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 266 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 323
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HR++ + N L+ + + K++DFG SR M D K
Sbjct: 324 ISSAMEYLEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 380
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 381 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 424
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
++E+L+ E + V + + C N RP+ E+
Sbjct: 425 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 84.3 bits (207), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
++ Q+++ +V+++G C E E +LV E G L++Y+ + +D+ I +
Sbjct: 423 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE------LV 475
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+VS + YL + + HRD+ + N+LL ++ AKISDFG S+++ D + Q G
Sbjct: 476 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 532
Query: 120 TF--GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + PE +F+ KSDV+SFGV++ E + GQKP R ++ E
Sbjct: 533 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 580
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 104/222 (46%), Gaps = 22/222 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H N+V+LLG C ++ EF+ G+L Y+ E ++ + L +A +
Sbjct: 308 VMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAV--VLLYMATQ 365
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S A+ YL I HR++ + N L+ + + K++DFG SR M D K
Sbjct: 366 ISSAMEYLEKKNFI---HRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPI 422
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENR 180
+ PE ++F+ KSDV++FGV+L E+ T G P I+ ++
Sbjct: 423 KWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSP----------------YPGIDLSQ 466
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
++E+L+ E + V + + C N RP+ E+
Sbjct: 467 VYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 84.0 bits (206), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 53/168 (31%), Positives = 93/168 (55%), Gaps = 15/168 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
++ Q+++ +V+++G C E E +LV E G L++Y+ + +D+ I +
Sbjct: 424 VMQQLDNPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNIIE------LV 476
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+VS + YL + + HRD+ + N+LL ++ AKISDFG S+++ D + Q G
Sbjct: 477 HQVSMGMKYLEESNFV---HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHG 533
Query: 120 TF--GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + PE +F+ KSDV+SFGV++ E + GQKP R ++ E
Sbjct: 534 KWPVKWYAPECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 581
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL-----------PI 50
+L+ + H+++V+ G C E L+V+E++ +G L++++ D P+
Sbjct: 73 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 132
Query: 51 TWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVD 109
L +A +V+ + YL A + HRD+ + N L+ KI DFG SR + + D
Sbjct: 133 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 189
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ + ++ PE +FT +SDV+SFGVVL E+ T G++P
Sbjct: 190 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 237
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL-----------PI 50
+L+ + H+++V+ G C E L+V+E++ +G L++++ D P+
Sbjct: 67 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 126
Query: 51 TWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVD 109
L +A +V+ + YL A + HRD+ + N L+ KI DFG SR + + D
Sbjct: 127 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 183
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ + ++ PE +FT +SDV+SFGVVL E+ T G++P
Sbjct: 184 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 231
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 91/162 (56%), Gaps = 17/162 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTED----QLPITWEIRLG 57
I+ Q +H N+++L G + + +++ E++ NG+L +++ E+ + QL +G
Sbjct: 99 IMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLREKDGEFSVLQL-------VG 151
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD--RTHLTT 115
+ ++ + YL A++ HRD+ + NIL++ K+SDFG SR + D T+ T+
Sbjct: 152 MLRGIAAGMKYL---ANMNYVHRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTS 208
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
K + PE +FT SDV+SFG+V+ E++T G++P
Sbjct: 209 GGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERP 250
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 82.0 bits (201), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 87/166 (52%), Gaps = 14/166 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL---------PITW 52
+L+ + H ++VK G C+E + ++V+E++ +G L++++ D + +T
Sbjct: 68 LLTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQ 127
Query: 53 EIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRT 111
L IA +++ + YL AS HRD+ + N L+ + KI DFG SR + + D
Sbjct: 128 SQMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVYSTDYY 184
Query: 112 HLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ ++ PE +FT +SDV+S GVVL E+ T G++P
Sbjct: 185 RVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQP 230
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 82.0 bits (201), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 49/168 (29%), Positives = 86/168 (51%), Gaps = 16/168 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL-----------PI 50
+L+ + H+++V+ G C E L+V+E++ +G L++++ D P+
Sbjct: 96 LLTMLQHQHIVRFFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPL 155
Query: 51 TWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVD 109
L +A +V+ + YL A + HRD+ + N L+ KI DFG SR + + D
Sbjct: 156 GLGQLLAVASQVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIYSTD 212
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ + ++ PE +FT +SDV+SFGVVL E+ T G++P
Sbjct: 213 YYRVGGRTMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQP 260
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 80.9 bits (198), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H NVV L G + ++V EF+ NG+L ++ + + Q + I+L G+
Sbjct: 97 IMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKH-DGQFTV---IQLVGMLR 152
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL A + HRD+ + NIL++ K+SDFG SR + D + T G
Sbjct: 153 GIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGK 209
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE Q +FT SDV+S+G+V+ E+++ G++P
Sbjct: 210 IPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.9 bits (198), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 81/158 (51%), Gaps = 9/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I+ Q +H N+++L G + ++V E++ NGSL ++ + Q I + G+
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLV--GMLRG 159
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA--VDRTHLTTQVKG 119
V + YL + HRD+ + N+L+D K+SDFG SR + D + TT K
Sbjct: 160 VGAGMRYLSDLGYV---HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKI 216
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE F+ SDV+SFGVV+ E+L G++P
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/161 (31%), Positives = 90/161 (55%), Gaps = 13/161 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H NV+ L G ++ +++ EF+ NGSL ++ Q + Q + I+L G+
Sbjct: 87 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTV---IQLVGMLR 142
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVK 118
++ + YL A + HRD+ + NIL++ K+SDFG SR + D + T+ +
Sbjct: 143 GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 199
Query: 119 GTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
G + PE Q +FT SDV+S+G+V+ E+++ G++P
Sbjct: 200 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 79/158 (50%), Gaps = 9/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I+ Q +H N+++L G + ++V E++ NGSL ++ + Q I + G+
Sbjct: 103 IMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTH-DGQFTIMQLV--GMLRG 159
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V + YL + HRD+ + N+L+D K+SDFG SR + D T G
Sbjct: 160 VGAGMRYLSDLGYV---HRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKI 216
Query: 122 G--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE F+ SDV+SFGVV+ E+L G++P
Sbjct: 217 PIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 79.7 bits (195), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/167 (31%), Positives = 93/167 (55%), Gaps = 13/167 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETE-VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
+++ +NH NV+ L+G L E +P ++ ++ +G L Q+I + P ++ +
Sbjct: 74 LLMRGLNHPNVLALIGIMLPPEGLPHVLLPYMCHGDLLQFIRSPQRN--PTVKDL-ISFG 130
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ--- 116
++V+ + YL A HRD+ + N +LD+ + K++DFG +R + +DR + + Q
Sbjct: 131 LQVARGMEYL---AEQKFVHRDLAARNCMLDESFTVKVADFGLARDI-LDREYYSVQQHR 186
Query: 117 -VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVE 161
+ + E Q+ +FT KSDV+SFGV+L ELLT G P R ++
Sbjct: 187 HARLPVKWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAPPYRHID 233
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 98/197 (49%), Gaps = 26/197 (13%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL------PITWEIR 55
+L+ + H ++VK G C + + ++V+E++ +G L++++ D + P +
Sbjct: 70 LLTNLQHEHIVKFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGE 129
Query: 56 LG------IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AV 108
LG IA +++ + YL AS HRD+ + N L+ KI DFG SR + +
Sbjct: 130 LGLSQMLHIASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDVYST 186
Query: 109 DRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP-IRLVETEENR 166
D + ++ PE +FT +SDV+SFGV+L E+ T G++P +L TE
Sbjct: 187 DYYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTE--- 243
Query: 167 SLAAYFLQVINENRLFE 183
++ I + R+ E
Sbjct: 244 -----VIECITQGRVLE 255
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E++ NGSL ++ + + Q + I+L G+
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTV---IQLVGMLR 125
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 126 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.3 bits (194), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E++ NGSL ++ + + Q + I+L G+
Sbjct: 87 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTV---IQLVGMLR 142
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 143 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 199
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 200 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E++ NGSL ++ + + Q + I+L G+
Sbjct: 97 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTV---IQLVGMLR 152
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 153 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 209
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 210 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 248
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E++ NGSL ++ + + Q + I+L G+
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTV---IQLVGMLR 154
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 155 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E++ NGSL ++ + + Q + I+L G+
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTV---IQLVGMLR 154
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 155 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E++ NGSL ++ + + Q + I+L G+
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTV---IQLVGMLR 154
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 155 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 25/221 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+LSQ + V K G L+ ++ E++ GS + D+ I +R E
Sbjct: 78 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----E 132
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L YLHS I HRDIK+AN+LL + K++DFG + + + T V GT
Sbjct: 133 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTP 188
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRL 181
++ PE + S + K+D++S G+ +EL G+ P E + FL N
Sbjct: 189 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP-----HSELHPMKVLFLIPKNNPPT 243
Query: 182 FEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E ++ L+E + CLN RPT KE+
Sbjct: 244 LEGNYSKPLKE-----------FVEACLNKEPSFRPTAKEL 273
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E++ NGSL ++ + + Q + I+L G+
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTV---IQLVGMLR 154
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 155 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/221 (28%), Positives = 98/221 (44%), Gaps = 25/221 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+LSQ + V K G L+ ++ E++ GS + D+ I +R E
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----E 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L YLHS I HRDIK+AN+LL + K++DFG + + + T V GT
Sbjct: 113 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTP 168
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRL 181
++ PE + S + K+D++S G+ +EL G+ P E + FL N
Sbjct: 169 FWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP-----HSELHPMKVLFLIPKNNPPT 223
Query: 182 FEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E ++ L+E + CLN RPT KE+
Sbjct: 224 LEGNYSKPLKE-----------FVEACLNKEPSFRPTAKEL 253
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 79.0 bits (193), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E++ NGSL ++ + + Q + I+L G+
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTV---IQLVGMLR 154
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 155 GIASGMKYLSDMGFV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 69/235 (29%), Positives = 105/235 (44%), Gaps = 33/235 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVP--LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
IL + H +++K GCC + LV E++P GSL Y+ + I L A
Sbjct: 86 ILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFA 140
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK- 118
++ ++YLH+ I HRD+ + N+LLD+ KI DFG ++ AV H +V+
Sbjct: 141 QQICEGMAYLHAQHYI---HRDLAARNVLLDNDRLVKIGDFGLAK--AVPEGHEXYRVRE 195
Query: 119 ----GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
F Y PE + +F SDV+SFGV L ELLT + ++S FL+
Sbjct: 196 DGDSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELLT--------HCDSSQSPPTKFLE 246
Query: 175 VINEN-------RLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+I RL E+L+ + V + K C RPT + +
Sbjct: 247 LIGIAQGQMTVLRLTELLERGERLPRPDKCPAEVYHLMKNCWETEASFRPTFENL 301
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 114
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T++ G
Sbjct: 115 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TELCG 168
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G +++ + + + ++Q T+
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------I 119
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 120 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 173
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E + NGSL ++ + + Q + I+L G+
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTV---IQLVGMLR 154
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL ++ HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 155 GIASGMKYLSDMGAV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 78.6 bits (192), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 115
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 116 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSCHAPSSRR---TTLSG 169
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N++ L G +++ ++V E++ NGSL ++ ++ + Q + I+L G+
Sbjct: 76 IMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFL-KKNDGQFTV---IQLVGMLR 131
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+S + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 132 GISAGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 188
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 189 IPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERP 227
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 114
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 115 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCG 168
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 78.2 bits (191), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 29/233 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET-EVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
IL + H +++K GCC + E L LV E++P GSL Y+ + I L A
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFA 123
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
++ ++YLHS I HR++ + N+LLD+ KI DFG ++++ + + G
Sbjct: 124 QQICEGMAYLHSQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 120 ---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI 176
F Y PE + +F SDV+SFGV L ELLT + ++S FL++I
Sbjct: 181 DSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELLT--------HCDSSQSPPTKFLELI 231
Query: 177 NEN-------RLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
RL E+L+ + V + K C RPT + +
Sbjct: 232 GIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENL 284
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+LSQ + V K G L+ ++ E++ GS + D+ I +R E
Sbjct: 73 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----E 127
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK--- 118
+ L YLHS I HRDIK+AN+LL + K++DFG + + TQ+K
Sbjct: 128 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLT------DTQIKRNX 178
Query: 119 --GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI 176
GT ++ PE + S + K+D++S G+ +EL G+ P E + FL
Sbjct: 179 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP-----HSELHPMKVLFLIPK 233
Query: 177 NENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
N E ++ L+E + CLN RPT KE+
Sbjct: 234 NNPPTLEGNYSKPLKE-----------FVEACLNKEPSFRPTAKEL 268
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 99/226 (43%), Gaps = 35/226 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+LSQ + V K G L+ ++ E++ GS + D+ I +R E
Sbjct: 58 VLSQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILR-----E 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK--- 118
+ L YLHS I HRDIK+AN+LL + K++DFG + + TQ+K
Sbjct: 113 ILKGLDYLHSEKKI---HRDIKAANVLLSEHGEVKLADFGVAGQLT------DTQIKRNX 163
Query: 119 --GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI 176
GT ++ PE + S + K+D++S G+ +EL G+ P E + FL
Sbjct: 164 FVGTPFWMAPEVIKQSAYDSKADIWSLGITAIELARGEPP-----HSELHPMKVLFLIPK 218
Query: 177 NENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
N E ++ L+E + CLN RPT KE+
Sbjct: 219 NNPPTLEGNYSKPLKE-----------FVEACLNKEPSFRPTAKEL 253
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 48/155 (30%), Positives = 78/155 (50%), Gaps = 9/155 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+LSQ + V K G L+ ++ E++ GS + D+ I ++ E
Sbjct: 74 VLSQCDSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLK-----E 128
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L YLHS I HRDIK+AN+LL ++ K++DFG + + + T V GT
Sbjct: 129 ILKGLDYLHSEKKI---HRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTP 184
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE Q S + K+D++S G+ +EL G+ P
Sbjct: 185 FWMAPEVIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 114
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 115 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCG 168
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 115
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 116 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCG 169
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 58 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 111
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 112 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 165
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 166 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 203
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 114
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 115 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TXLCG 168
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 119
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 120 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TDLCG 173
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 77.8 bits (190), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 87/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E++ NGSL ++ + + Q + I+L G+
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTV---IQLVGMLR 154
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG +R + D T G
Sbjct: 155 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGK 211
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 117
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 118 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 171
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 118
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 119 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 172
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 210
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 117
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 118 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 171
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G +++ + + + ++Q T+
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQKLSKFDEQRTATY------I 119
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 120 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLXG 173
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 131
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 132 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 185
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 186 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 223
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 60 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 113
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 114 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 167
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 168 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 205
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 114
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 115 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 168
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 77.8 bits (190), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 119
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 120 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 173
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 174 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E + NGSL ++ + + Q + I+L G+
Sbjct: 70 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTV---IQLVGMLR 125
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 126 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 182
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 183 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + L ++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDL 152
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLT 114
+ A +V+ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 153 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV+L E+ T G P V EE
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------- 260
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRA 231
LF++L + + M+ + C + +RPT K++ +L I A
Sbjct: 261 -------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 77.4 bits (189), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 89/161 (55%), Gaps = 13/161 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H NV+ L G ++ +++ EF+ NGSL ++ Q + Q + I+L G+
Sbjct: 61 IMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLR-QNDGQFTV---IQLVGMLR 116
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVK 118
++ + YL A + HR + + NIL++ K+SDFG SR + D + T+ +
Sbjct: 117 GIAAGMKYL---ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALG 173
Query: 119 GTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
G + PE Q +FT SDV+S+G+V+ E+++ G++P
Sbjct: 174 GKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 119
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 120 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 173
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 174 TLDYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPF 211
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E++ NGSL ++ + + Q + I+L G+
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH-DAQFTV---IQLVGMLR 154
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG R + D T G
Sbjct: 155 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGK 211
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 77.4 bits (189), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 140
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 141 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---TTLCG 194
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + L ++
Sbjct: 134 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 193
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ A +V+ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 194 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV+L E+ T G P V EE
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------- 301
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRA 231
LF++L + + M+ + C + +RPT K++ +L I A
Sbjct: 302 -------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 352
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 106/233 (45%), Gaps = 29/233 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET-EVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
IL + H +++K GCC + E L LV E++P GSL Y+ + I L A
Sbjct: 69 ILRTLYHEHIIKYKGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHS-----IGLAQLLLFA 123
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
++ ++YLH+ I HR++ + N+LLD+ KI DFG ++++ + + G
Sbjct: 124 QQICEGMAYLHAQHYI---HRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 180
Query: 120 ---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI 176
F Y PE + +F SDV+SFGV L ELLT + ++S FL++I
Sbjct: 181 DSPVFWYA-PECLKEYKFYYASDVWSFGVTLYELLT--------HCDSSQSPPTKFLELI 231
Query: 177 NEN-------RLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
RL E+L+ + V + K C RPT + +
Sbjct: 232 GIAQGQMTVLRLTELLERGERLPRPDKCPCEVYHLMKNCWETEASFRPTFENL 284
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 86/159 (54%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q +H N+++L G +++ ++V E + NGSL ++ + + Q + I+L G+
Sbjct: 99 IMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH-DAQFTV---IQLVGMLR 154
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ + YL + HRD+ + NIL++ K+SDFG SR + D T G
Sbjct: 155 GIASGMKYLSDMGYV---HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGK 211
Query: 121 FG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT SDV+S+G+VL E+++ G++P
Sbjct: 212 IPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 250
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + L ++
Sbjct: 85 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 144
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ A +V+ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 145 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV+L E+ T G P V EE
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------- 252
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRA 231
LF++L + + M+ + C + +RPT K++ +L I A
Sbjct: 253 -------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 303
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + L ++
Sbjct: 86 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 145
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ A +V+ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 146 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV+L E+ T G P V EE
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------- 253
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRA 231
LF++L + + M+ + C + +RPT K++ +L I A
Sbjct: 254 -------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 304
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + L ++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ A +V+ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 153 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV+L E+ T G P V EE
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------- 260
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRA 231
LF++L + + M+ + C + +RPT K++ +L I A
Sbjct: 261 -------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + L ++
Sbjct: 82 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDL 141
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ A +V+ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 142 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV+L E+ T G P V EE
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------- 249
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRA 231
LF++L + + M+ + C + +RPT K++ +L I A
Sbjct: 250 -------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 300
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 14/175 (8%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP--------IT 51
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P +T
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 52 WEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRT 111
E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R + D
Sbjct: 143 LEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKIXDFGLARDIYKDPD 199
Query: 112 HL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 82/160 (51%), Gaps = 15/160 (9%)
Query: 4 SQINHRNVVKLLGCC-LETE---VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
+ +NH +V + ET +P +V E++ +L +H + P+T + + +
Sbjct: 67 AALNHPAIVAVYATGEAETPAGPLPYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVI 122
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ--- 116
+ AL++ H I HRD+K ANI++ K+ DFG +R++A D + TQ
Sbjct: 123 ADACQALNFSHQNG---IIHRDVKPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAA 178
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
V GT YL PE + +SDVYS G VL E+LTG+ P
Sbjct: 179 VIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 106/238 (44%), Gaps = 33/238 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + L ++
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDL 152
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ A +V+ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 153 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV+L E+ T G P V EE
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------- 260
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRA 231
LF++L + + M+ + C + +RPT K++ +L I A
Sbjct: 261 -------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------I 118
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R T + G
Sbjct: 119 TELANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---TTLCG 172
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G P
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 90/175 (51%), Gaps = 14/175 (8%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP--------IT 51
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P +T
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLT 142
Query: 52 WEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRT 111
E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R + D
Sbjct: 143 LEHLICYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARDIYKDPD 199
Query: 112 HL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 200 YVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 254
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G ++ L+ E+ P G++++ + + + ++Q T+
Sbjct: 61 IQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 114
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 115 TELANALSYCHSKKVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCG 168
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 76.6 bits (187), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 37/226 (16%)
Query: 10 NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIRLGIAVEVS 63
+VV+LLG + + L+V E + +G L Y+ E + P T + + +A E++
Sbjct: 78 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 137
Query: 64 GALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFG- 122
++YL++ + HRD+ + N ++ + KI DFG +R D KG G
Sbjct: 138 DGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGL 190
Query: 123 ----YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI-N 177
++ PE + FT SD++SFGVVL E+ SLA Q + N
Sbjct: 191 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT---------------SLAEQPYQGLSN 235
Query: 178 ENRLFEVLDAQVLREAEK-EEVITVAMVAKRCLNLNGKKRPTMKEV 222
E L V+D L + + E +T M + C N K RPT E+
Sbjct: 236 EQVLKFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPKMRPTFLEI 279
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 103/226 (45%), Gaps = 37/226 (16%)
Query: 10 NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIRLGIAVEVS 63
+VV+LLG + + L+V E + +G L Y+ E + P T + + +A E++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 64 GALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFG- 122
++YL++ + HRD+ + N ++ + KI DFG +R D KG G
Sbjct: 141 DGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGL 193
Query: 123 ----YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI-N 177
++ PE + FT SD++SFGVVL E+ SLA Q + N
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT---------------SLAEQPYQGLSN 238
Query: 178 ENRLFEVLDAQVLREAEK-EEVITVAMVAKRCLNLNGKKRPTMKEV 222
E L V+D L + + E +T M + C N K RPT E+
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPKMRPTFLEI 282
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
++ Q+ H+ +V+L T+ P+ ++ E++ NGSL ++ +T + +T L +A
Sbjct: 61 LMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAA 116
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 117 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 173
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE FT KSDV+SFG++L E++T G+ P
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 71/136 (52%), Gaps = 9/136 (6%)
Query: 23 VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDI 82
+P +V E++ +L +H + P+T + + + + AL++ H I HRD+
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG---IIHRDV 142
Query: 83 KSANILLDDKYRAKISDFGTSRSMAVDRTHL--TTQVKGTFGYLDPEYFQSSQFTEKSDV 140
K ANIL+ K+ DFG +R++A + T V GT YL PE + +SDV
Sbjct: 143 KPANILISATNAVKVVDFGIARAIADSGNSVXQTAAVIGTAQYLSPEQARGDSVDARSDV 202
Query: 141 YSFGVVLVELLTGQKP 156
YS G VL E+LTG+ P
Sbjct: 203 YSLGCVLYEVLTGEPP 218
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 33/238 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + L +
Sbjct: 78 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 137
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ A +V+ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 138 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV+L E+ T G P V EE
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------- 245
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRA 231
LF++L + + M+ + C + +RPT K++ +L I A
Sbjct: 246 -------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 296
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
++ Q+ H+ +V+L T+ P+ ++ E++ NGSL ++ +T + +T L +A
Sbjct: 62 LMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAA 117
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 118 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 174
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE FT KSDV+SFG++L E++T G+ P
Sbjct: 175 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 211
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 11/137 (8%)
Query: 23 VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDI 82
+P +V E++ +L +H + P+T + + + + AL++ H I HRD+
Sbjct: 107 LPYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG---IIHRDV 159
Query: 83 KSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ---VKGTFGYLDPEYFQSSQFTEKSD 139
K ANI++ K+ DFG +R++A D + TQ V GT YL PE + +SD
Sbjct: 160 KPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 218
Query: 140 VYSFGVVLVELLTGQKP 156
VYS G VL E+LTG+ P
Sbjct: 219 VYSLGCVLYEVLTGEPP 235
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 11/137 (8%)
Query: 23 VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDI 82
+P +V E++ +L +H + P+T + + + + AL++ H I HRD+
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG---IIHRDV 142
Query: 83 KSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ---VKGTFGYLDPEYFQSSQFTEKSD 139
K ANI++ K+ DFG +R++A D + TQ V GT YL PE + +SD
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 140 VYSFGVVLVELLTGQKP 156
VYS G VL E+LTG+ P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-----QTEDQLPITWEIRL 56
++ ++H +V+L G C + ++ E++ NG L Y+ E QT+ QL L
Sbjct: 52 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-QL-------L 103
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+ +V A+ YL S + HRD+ + N L++D+ K+SDFG SR + D +
Sbjct: 104 EMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 160
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPI-RLVETEENRSLA 169
K + PE S+F+ KSD+++FGV++ E+ + G+ P R +E +A
Sbjct: 161 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 215
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ Q+ H+ +V+L + + ++ E++ NGSL ++ +T + +T L +A +
Sbjct: 70 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQ 126
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 127 IAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 183
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE FT KSDV+SFG++L E++T
Sbjct: 184 KWTAPEAINYGTFTIKSDVWSFGILLTEIVT 214
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 11/137 (8%)
Query: 23 VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDI 82
+P +V E++ +L +H + P+T + + + + AL++ H I HRD+
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG---IIHRDV 142
Query: 83 KSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ---VKGTFGYLDPEYFQSSQFTEKSD 139
K ANI++ K+ DFG +R++A D + TQ V GT YL PE + +SD
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 140 VYSFGVVLVELLTGQKP 156
VYS G VL E+LTG+ P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
++ Q+ H+ +V+L T+ P+ ++ E++ NGSL ++ +T + +T L +A
Sbjct: 63 LMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAA 118
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 119 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFP 175
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE FT KSDV+SFG++L E++T G+ P
Sbjct: 176 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 212
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/137 (34%), Positives = 73/137 (53%), Gaps = 11/137 (8%)
Query: 23 VPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDI 82
+P +V E++ +L +H + P+T + + + + AL++ H I HRD+
Sbjct: 90 LPYIVMEYVDGVTLRDIVHTEG----PMTPKRAIEVIADACQALNFSHQNG---IIHRDV 142
Query: 83 KSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ---VKGTFGYLDPEYFQSSQFTEKSD 139
K ANI++ K+ DFG +R++A D + TQ V GT YL PE + +SD
Sbjct: 143 KPANIMISATNAVKVMDFGIARAIA-DSGNSVTQTAAVIGTAQYLSPEQARGDSVDARSD 201
Query: 140 VYSFGVVLVELLTGQKP 156
VYS G VL E+LTG+ P
Sbjct: 202 VYSLGCVLYEVLTGEPP 218
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 35/233 (15%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + ++H ++V+LLG C + + LV +++P GSL ++ + P ++ L V
Sbjct: 67 LAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGP---QLLLNWGV 122
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT-TQVKG 119
+++ + YL + HR++ + N+LL + +++DFG + + D L ++ K
Sbjct: 123 QIAKGMYYLEEHGMV---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 179
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINE 178
++ E ++T +SDV+S+GV + EL+T G +P +
Sbjct: 180 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL------------------ 221
Query: 179 NRLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALEL 226
RL EV D +L + E+ I V MV +C ++ RPT KE+A E
Sbjct: 222 -RLAEVPD--LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 271
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-----QTEDQLPITWEIRL 56
++ ++H +V+L G C + ++ E++ NG L Y+ E QT+ QL L
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-QL-------L 108
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+ +V A+ YL S + HRD+ + N L++D+ K+SDFG SR + D +
Sbjct: 109 EMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 165
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPI-RLVETEENRSLA 169
K + PE S+F+ KSD+++FGV++ E+ + G+ P R +E +A
Sbjct: 166 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 16/171 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
IL ++NH +VKL +TE L L+ +F+ G L + ++ TE+ +++
Sbjct: 80 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE------DVKFY 132
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+A E++ AL +LHS + I +RD+K NILLD++ K++DFG S+ ++D
Sbjct: 133 LA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSF 187
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSL 168
GT Y+ PE T+ +D +SFGV++ E+LTG P + + +E ++
Sbjct: 188 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 238
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-----QTEDQLPITWEIRL 56
++ ++H +V+L G C + ++ E++ NG L Y+ E QT+ QL L
Sbjct: 56 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-QL-------L 107
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+ +V A+ YL S + HRD+ + N L++D+ K+SDFG SR + D +
Sbjct: 108 EMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 164
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPI-RLVETEENRSLA 169
K + PE S+F+ KSD+++FGV++ E+ + G+ P R +E +A
Sbjct: 165 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 219
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 16/171 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
IL ++NH +VKL +TE L L+ +F+ G L + ++ TE+ +++
Sbjct: 79 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE------DVKFY 131
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+A E++ AL +LHS + I +RD+K NILLD++ K++DFG S+ ++D
Sbjct: 132 LA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSF 186
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSL 168
GT Y+ PE T+ +D +SFGV++ E+LTG P + + +E ++
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/184 (28%), Positives = 92/184 (50%), Gaps = 25/184 (13%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTE---------------- 45
+L Q+NH +V+KL G C + LL+ E+ GSL ++ E +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 46 ----DQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFG 101
D+ +T + A ++S + YL A + + HRD+ + NIL+ + + KISDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 102 TSRSMAVDRTHLT-TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRL 159
SR + + +++ +Q + ++ E +T +SDV+SFGV+L E++T G P
Sbjct: 196 LSRDVYEEDSYVKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPG 255
Query: 160 VETE 163
+ E
Sbjct: 256 IPPE 259
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ Q+ H+ +V+L + + ++ E++ NGSL ++ +T + +T L +A +
Sbjct: 69 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQ 125
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 126 IAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 182
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE FT KSDV+SFG++L E++T
Sbjct: 183 KWTAPEAINYGTFTIKSDVWSFGILLTEIVT 213
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 105/238 (44%), Gaps = 33/238 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + L +
Sbjct: 93 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDL 152
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ A +V+ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 153 VSCAYQVARGMEYLASKKCI---HRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV+L E+ T G P V EE
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEE--------- 260
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRA 231
LF++L + + M+ + C + +RPT K++ +L I A
Sbjct: 261 -------LFKLLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRIVA 311
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
++ Q+ H+ +V+L T+ P+ ++ E++ NGSL ++ +T + +T L +A
Sbjct: 56 LMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAA 111
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 112 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 168
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE FT KSDV+SFG++L E++T G+ P
Sbjct: 169 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 205
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 10 NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIRLGIAVEVS 63
+VV+LLG + + L+V E + +G L Y+ E + P T + + +A E++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 64 GALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFG- 122
++YL++ + HRD+ + N ++ + KI DFG +R + + + KG
Sbjct: 141 DGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDI-YETAYYRKGGKGLLPV 196
Query: 123 -YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI-NENR 180
++ PE + FT SD++SFGVVL E+ SLA Q + NE
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEIT---------------SLAEQPYQGLSNEQV 241
Query: 181 LFEVLDAQVLREAEK-EEVITVAMVAKRCLNLNGKKRPTMKEV 222
L V+D L + + E +T M + C N K RPT E+
Sbjct: 242 LKFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPKMRPTFLEI 282
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/233 (25%), Positives = 112/233 (48%), Gaps = 35/233 (15%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + ++H ++V+LLG C + + LV +++P GSL ++ + P ++ L V
Sbjct: 85 LAIGSLDHAHIVRLLGLCPGSSL-QLVTQYLPLGSLLDHVRQHRGALGP---QLLLNWGV 140
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT-TQVKG 119
+++ + YL + HR++ + N+LL + +++DFG + + D L ++ K
Sbjct: 141 QIAKGMYYLEEHGMV---HRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKT 197
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINE 178
++ E ++T +SDV+S+GV + EL+T G +P +
Sbjct: 198 PIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL------------------ 239
Query: 179 NRLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALEL 226
RL EV D +L + E+ I V MV +C ++ RPT KE+A E
Sbjct: 240 -RLAEVPD--LLEKGERLAQPQICTIDVYMVMVKCWMIDENIRPTFKELANEF 289
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ Q+ H+ +V+L + + ++ E++ NGSL ++ +T + +T L +A +
Sbjct: 67 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQ 123
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 124 IAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 180
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE FT KSDV+SFG++L E++T
Sbjct: 181 KWTAPEAINYGTFTIKSDVWSFGILLTEIVT 211
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 114
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 115 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCG 168
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 76.3 bits (186), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ Q+ H+ +V+L + + ++ E++ NGSL ++ +T + +T L +A +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQ 117
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 118 IAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPI 174
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE FT KSDV+SFG++L E++T
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 117
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI++FG S R T + G
Sbjct: 118 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCG 171
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 117
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 118 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCG 171
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 116
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI++FG S R T + G
Sbjct: 117 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIANFGWSVHAPSSRR---TTLCG 170
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 117
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 118 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---AALCG 171
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-----QTEDQLPITWEIRL 56
++ ++H +V+L G C + ++ E++ NG L Y+ E QT+ QL L
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-QL-------L 123
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+ +V A+ YL S + HRD+ + N L++D+ K+SDFG SR + D +
Sbjct: 124 EMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVG 180
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPI-RLVETEENRSLA 169
K + PE S+F+ KSD+++FGV++ E+ + G+ P R +E +A
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
++ Q+ H+ +V+L T+ P+ ++ E++ NGSL ++ +T + +T L +A
Sbjct: 61 LMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAA 116
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 117 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 173
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE FT KSDV+SFG++L E++T G+ P
Sbjct: 174 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 210
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 95/171 (55%), Gaps = 16/171 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
IL ++NH +VKL +TE L L+ +F+ G L + ++ TE+ +++
Sbjct: 79 ILVEVNHPFIVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE------DVKFY 131
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+A E++ AL +LHS + I +RD+K NILLD++ K++DFG S+ ++D
Sbjct: 132 LA-ELALALDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-SIDHEKKAYSF 186
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSL 168
GT Y+ PE T+ +D +SFGV++ E+LTG P + + +E ++
Sbjct: 187 CGTVEYMAPEVVNRRGHTQSADWWSFGVLMFEMLTGTLPFQGKDRKETMTM 237
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.9 bits (185), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 104/223 (46%), Gaps = 31/223 (13%)
Query: 10 NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIRLGIAVEVS 63
+VV+LLG + + L+V E + +G L Y+ E + P T + + +A E++
Sbjct: 80 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 139
Query: 64 GALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFG- 122
++YL++ + HRD+ + N ++ + KI DFG +R + + + KG
Sbjct: 140 DGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPV 195
Query: 123 -YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI-NENR 180
++ PE + FT SD++SFGVVL E+ SLA Q + NE
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEIT---------------SLAEQPYQGLSNEQV 240
Query: 181 LFEVLDAQVLREAEK-EEVITVAMVAKRCLNLNGKKRPTMKEV 222
L V+D L + + E +T M + C N K RPT E+
Sbjct: 241 LKFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPKMRPTFLEI 281
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
++ Q+ H+ +V+L T+ P+ ++ E++ NGSL ++ +T + +T L +A
Sbjct: 66 LMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAA 121
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 122 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 178
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE FT KSDV+SFG++L E++T G+ P
Sbjct: 179 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 215
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-----QTEDQLPITWEIRL 56
++ ++H +V+L G C + ++ E++ NG L Y+ E QT+ QL L
Sbjct: 63 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-QL-------L 114
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+ +V A+ YL S + HRD+ + N L++D+ K+SDFG SR + D +
Sbjct: 115 EMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 171
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPI-RLVETEENRSLA 169
K + PE S+F+ KSD+++FGV++ E+ + G+ P R +E +A
Sbjct: 172 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 226
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
++ Q+ H+ +V+L T+ P+ ++ E++ NGSL ++ +T + +T L +A
Sbjct: 67 LMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAA 122
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 123 QIAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 179
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE FT KSDV+SFG++L E++T G+ P
Sbjct: 180 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 216
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-----QTEDQLPITWEIRL 56
++ ++H +V+L G C + ++ E++ NG L Y+ E QT+ QL L
Sbjct: 57 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-QL-------L 108
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+ +V A+ YL S + HRD+ + N L++D+ K+SDFG SR + D +
Sbjct: 109 EMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRG 165
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPI-RLVETEENRSLA 169
K + PE S+F+ KSD+++FGV++ E+ + G+ P R +E +A
Sbjct: 166 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 220
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 106/231 (45%), Gaps = 31/231 (13%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ +VV+LLG + + L+V E + +G L Y+ E + P T +
Sbjct: 73 VMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEM 132
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + KI DFG +R + + +
Sbjct: 133 IQMAAEIADGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRK 188
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFL 173
KG ++ PE + FT SD++SFGVVL E+ SLA
Sbjct: 189 GGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT---------------SLAEQPY 233
Query: 174 QVI-NENRLFEVLDAQVLREAEK-EEVITVAMVAKRCLNLNGKKRPTMKEV 222
Q + NE L V+D L + + E +T M + C N K RPT E+
Sbjct: 234 QGLSNEQVLKFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPKMRPTFLEI 282
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 114
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 115 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCG 168
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 169 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 206
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/175 (29%), Positives = 90/175 (51%), Gaps = 18/175 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-----QTEDQLPITWEIRL 56
++ ++H +V+L G C + ++ E++ NG L Y+ E QT+ QL L
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQ-QL-------L 123
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+ +V A+ YL S + HRD+ + N L++D+ K+SDFG SR + D +
Sbjct: 124 EMCKDVCEAMEYLESKQFL---HRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVG 180
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPI-RLVETEENRSLA 169
K + PE S+F+ KSD+++FGV++ E+ + G+ P R +E +A
Sbjct: 181 SKFPVRWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSETAEHIA 235
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 104/225 (46%), Gaps = 21/225 (9%)
Query: 2 ILSQINHRNVVKLLGCCLE-TEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
+L ++ H N+V+ ++ T L +V E+ G L I + T+++ + E L +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 60 VEVSGALSYLH--SAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+++ AL H S + HRD+K AN+ LD K K+ DFG +R + D + T V
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVIN 177
GT Y+ PE + EKSD++S G +L EL P +E LA I
Sbjct: 178 -GTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LAG----KIR 229
Query: 178 ENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E + + E E+IT R LNL RP+++E+
Sbjct: 230 EGKFRRI---PYRYSDELNEIIT------RMLNLKDYHRPSVEEI 265
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 116
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 117 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---XXLCG 170
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 171 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 208
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 84/162 (51%), Gaps = 17/162 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLG 57
I+ Q +H N++ L G + + +++ E++ NGSL ++ + T QL +G
Sbjct: 83 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-------VG 135
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + + YL +++ HRD+ + NIL++ K+SDFG SR + D T
Sbjct: 136 MLRGIGSGMKYLSDMSAV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 192
Query: 118 KGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
G + PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 193 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 234
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 29/233 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
IL + H ++VK GCC + + LV E++P GSL Y+ + L A
Sbjct: 63 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-----VGLAQLLLFA 117
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
++ ++YLH+ I HR + + N+LLD+ KI DFG ++++ + + G
Sbjct: 118 QQICEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 174
Query: 120 ---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI 176
F Y PE + +F SDV+SFGV L ELLT + N+S F ++I
Sbjct: 175 DSPVFWYA-PECLKECKFYYASDVWSFGVTLYELLT--------YCDSNQSPHTKFTELI 225
Query: 177 NEN-------RLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
RL E+L+ + + K C RPT + +
Sbjct: 226 GHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNL 278
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 117
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 118 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCG 171
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 172 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 101/233 (43%), Gaps = 29/233 (12%)
Query: 2 ILSQINHRNVVKLLGCCLET--EVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
IL + H ++VK GCC + + LV E++P GSL Y+ + L A
Sbjct: 64 ILRTLYHEHIVKYKGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHC-----VGLAQLLLFA 118
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
++ ++YLH+ I HR + + N+LLD+ KI DFG ++++ + + G
Sbjct: 119 QQICEGMAYLHAQHYI---HRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDG 175
Query: 120 ---TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI 176
F Y PE + +F SDV+SFGV L ELLT + N+S F ++I
Sbjct: 176 DSPVFWYA-PECLKECKFYYASDVWSFGVTLYELLT--------YCDSNQSPHTKFTELI 226
Query: 177 NEN-------RLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
RL E+L+ + + K C RPT + +
Sbjct: 227 GHTQGQMTVLRLTELLERGERLPRPDRCPCEIYHLMKNCWETEASFRPTFQNL 279
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 115
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 116 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DTLCG 169
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 170 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 207
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 82/151 (54%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ Q+ H+ +V+L + + ++ E++ NGSL ++ +T + +T L +A +
Sbjct: 71 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQ 127
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++++ I HRD+++ANIL+ D KI+DFG +R + + K
Sbjct: 128 IAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPI 184
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE FT KSDV+SFG++L E++T
Sbjct: 185 KWTAPEAINYGTFTIKSDVWSFGILLTEIVT 215
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 75.5 bits (184), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 89/177 (50%), Gaps = 16/177 (9%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDF 144
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R + D
Sbjct: 145 LTLEHLIXYSFQVAKGMEFLASRKXI---HRDLAARNILLSEKNVVKICDFGLARDIXKD 201
Query: 110 RTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
+ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 202 PDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 160 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 267
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 268 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 160 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKT 216
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 267
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 268 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 78/158 (49%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSKFDEQRTATY------I 140
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 141 TELANALSYCHSKRVI---HRDIKPENLLLGSAGELKIADFGWSVHAPSSRR---DDLCG 194
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G+ P
Sbjct: 195 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPF 232
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 50 --ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA 107
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 108 VDRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
D ++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 200 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYK 144
Query: 50 --ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA 107
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R +
Sbjct: 145 DFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIY 201
Query: 108 VDRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
D ++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 202 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 260
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 120 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 179
Query: 50 --ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA 107
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R +
Sbjct: 180 DFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIY 236
Query: 108 VDRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
D ++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 237 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 295
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTE---------------- 45
+L Q+NH +V+KL G C + LL+ E+ GSL ++ E +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 46 ----DQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFG 101
D+ +T + A ++S + YL A + + HRD+ + NIL+ + + KISDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFG 195
Query: 102 TSRSM-----AVDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQK 155
SR + V R+ VK ++ E +T +SDV+SFGV+L E++T G
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVK----WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 156 PIRLVETE 163
P + E
Sbjct: 252 PYPGIPPE 259
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVY-EFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 50 --ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA 107
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIY 190
Query: 108 VDRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
D ++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 191 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 18/179 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVY-EFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 50 --ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA 107
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIY 190
Query: 108 VDRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
D ++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 191 KDPDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/188 (29%), Positives = 90/188 (47%), Gaps = 33/188 (17%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTE---------------- 45
+L Q+NH +V+KL G C + LL+ E+ GSL ++ E +
Sbjct: 79 VLKQVNHPHVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSS 138
Query: 46 ----DQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFG 101
D+ +T + A ++S + YL A + + HRD+ + NIL+ + + KISDFG
Sbjct: 139 LDHPDERALTMGDLISFAWQISQGMQYL---AEMSLVHRDLAARNILVAEGRKMKISDFG 195
Query: 102 TSRSM-----AVDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQK 155
SR + V R+ VK ++ E +T +SDV+SFGV+L E++T G
Sbjct: 196 LSRDVYEEDSXVKRSQGRIPVK----WMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGN 251
Query: 156 PIRLVETE 163
P + E
Sbjct: 252 PYPGIPPE 259
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 111/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L++ + +P G L Y+ E ++ I + L V+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 127
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 128 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 232
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ ++C ++ RP +E+ +E +
Sbjct: 233 ---------ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 276
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 75.1 bits (183), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + H N++ +G + ++ + V ++ SL+ ++H +E + + + + IA +
Sbjct: 73 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHA-SETKFEM--KKLIDIARQ 128
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFG-TSRSMAVDRTHLTTQVKGT 120
+ + YLH+ + I HRD+KS NI L + KI DFG + +H Q+ G+
Sbjct: 129 TARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 121 FGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE + S+ ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 149 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 205
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 206 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 256
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 257 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 305
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/178 (30%), Positives = 89/178 (50%), Gaps = 17/178 (9%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 84 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKD 143
Query: 50 -ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV 108
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R +
Sbjct: 144 FLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIXK 200
Query: 109 DRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
D + + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 201 DPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 147 VSCTYQLARGMEYLASQKCI---HRDLTARNVLVTENNVMKIADFGLARDINNIDYYKKT 203
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 204 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 254
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 255 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 303
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/151 (28%), Positives = 81/151 (53%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ Q+ H+ +V+L + + ++ E++ NGSL ++ +T + +T L +A +
Sbjct: 61 LMKQLQHQRLVRLYAVVTQEPI-YIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQ 117
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++++ I HRD+++ANIL+ D KI+DFG +R + K
Sbjct: 118 IAEGMAFIEERNYI---HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPI 174
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE FT KSDV+SFG++L E++T
Sbjct: 175 KWTAPEAINYGTFTIKSDVWSFGILLTEIVT 205
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 170
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 59/226 (26%), Positives = 102/226 (45%), Gaps = 35/226 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+LSQ + + + G L++ ++ E++ GS + ++ I +R E
Sbjct: 70 VLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYIATILR-----E 124
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK--- 118
+ L YLHS I HRDIK+AN+LL ++ K++DFG + + TQ+K
Sbjct: 125 ILKGLDYLHSERKI---HRDIKAANVLLSEQGDVKLADFGVAGQLT------DTQIKRNX 175
Query: 119 --GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI 176
GT ++ PE + S + K+D++S G+ +EL G+ P + + FL
Sbjct: 176 FVGTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPP-----NSDLHPMRVLFLIPK 230
Query: 177 NENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
N E ++ +E + CLN + + RPT KE+
Sbjct: 231 NSPPTLEGQHSKPFKE-----------FVEACLNKDPRFRPTAKEL 265
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+++Q+ H N+V+LLG +E + L +V E++ GSL Y+ + L + L ++
Sbjct: 52 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL--GGDCLLKFSL 109
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+V A+ YL + HRD+ + N+L+ + AK+SDFG ++ + + VK T
Sbjct: 110 DVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 166
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
PE + +F+ KSDV+SFG++L E+ + G+ P
Sbjct: 167 ----APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 199
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 152 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 208
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 209 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 259
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 260 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 308
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 2 ILSQINHRNVVKLLGCCLE-TEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
+L ++ H N+V+ ++ T L +V E+ G L I + T+++ + E L +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 60 VEVSGALSYLH--SAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+++ AL H S + HRD+K AN+ LD K K+ DFG +R + D T
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHD-TSFAKAF 176
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVIN 177
GT Y+ PE + EKSD++S G +L EL P +E LA I
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LAG----KIR 229
Query: 178 ENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E + + E E+IT R LNL RP+++E+
Sbjct: 230 EGKFRRI---PYRYSDELNEIIT------RMLNLKDYHRPSVEEI 265
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+++Q+ H N+V+LLG +E + L +V E++ GSL Y+ + L + L ++
Sbjct: 67 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL--GGDCLLKFSL 124
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+V A+ YL + HRD+ + N+L+ + AK+SDFG ++ + + VK T
Sbjct: 125 DVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 181
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
PE + +F+ KSDV+SFG++L E+ + G+ P
Sbjct: 182 ----APEALREKKFSTKSDVWSFGILLWEIYSFGRVP 214
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 80 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 135
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 136 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 192
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 193 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 240
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ ++C ++ RP +E+ +E +
Sbjct: 241 ---------ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 284
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 128
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 129 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 233
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ ++C ++ RP +E+ +E +
Sbjct: 234 ---------ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 277
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 88/159 (55%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + H N++ +G ++ + V ++ SL+ ++H +E + + + + IA +
Sbjct: 73 VLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHA-SETKFEM--KKLIDIARQ 128
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVKGT 120
+ + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+ G+
Sbjct: 129 TARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGS 185
Query: 121 FGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE + S+ ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 186 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 224
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 78/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I + +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 58 INAMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 64/226 (28%), Positives = 102/226 (45%), Gaps = 37/226 (16%)
Query: 10 NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIRLGIAVEVS 63
+VV+LLG + + L+V E + +G L Y+ E + P T + + +A E++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 64 GALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFG- 122
++YL++ + HRD+ + N ++ + KI DFG +R D KG G
Sbjct: 141 DGMAYLNAKKFV---HRDLAARNCMVAHDFTVKIGDFGMTR----DIXETDXXRKGGKGL 193
Query: 123 ----YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI-N 177
++ PE + FT SD++SFGVVL E+ SLA Q + N
Sbjct: 194 LPVRWMAPESLKDGVFTTSSDMWSFGVVLWEIT---------------SLAEQPYQGLSN 238
Query: 178 ENRLFEVLDAQVLREAEK-EEVITVAMVAKRCLNLNGKKRPTMKEV 222
E L V+D L + + E +T M + C N RPT E+
Sbjct: 239 EQVLKFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPNMRPTFLEI 282
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 74.7 bits (182), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 18/179 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 50 --ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA 107
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIX 199
Query: 108 VDRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
D + + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 127
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 128 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 232
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ ++C ++ RP +E+ +E +
Sbjct: 233 ---------ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 276
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 18/179 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 50 --ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA 107
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 108 VDRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
D + + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 191 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 111/231 (48%), Gaps = 27/231 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+++Q+ H N+V+LLG +E + L +V E++ GSL Y+ + L + L ++
Sbjct: 239 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL--GGDCLLKFSL 296
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+V A+ YL + HRD+ + N+L+ + AK+SDFG ++ + + VK T
Sbjct: 297 DVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 353
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
PE + +F+ KSDV+SFG++L E+ + G+ P + ++
Sbjct: 354 ----APEALREKKFSTKSDVWSFGILLWEIYSFGRVPYPRIPLKD--------------- 394
Query: 180 RLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIR 230
+ ++ +A V V K C +L+ RPT ++ +L IR
Sbjct: 395 -VVPRVEKGYKMDAPDGCPPAVYDVMKNCWHLDAATRPTFLQLREQLEHIR 444
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLG 57
I+ Q +H N++ L G + + +++ E++ NGSL ++ + T QL +G
Sbjct: 68 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-------VG 120
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + + YL + + HRD+ + NIL++ K+SDFG SR + D T
Sbjct: 121 MLRGIGSGMKYLSDMSYV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 177
Query: 118 KGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
G + PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 178 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 206 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 262
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 263 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 313
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 314 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 362
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 125
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 126 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 230
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ ++C ++ RP +E+ +E +
Sbjct: 231 ---------ILEKGERLPQPPICTIDVYMIMRKCWMIDADSRPKFRELIIEFS 274
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/229 (25%), Positives = 105/229 (45%), Gaps = 23/229 (10%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEV 62
+ +++H +VK G C + +V E+I NG L Y+ + P L + +V
Sbjct: 57 MMKLSHPKLVKFYGVCSKEYPIYIVTEYISNGCLLNYLRSHGKGLEPSQ---LLEMCYDV 113
Query: 63 SGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFG 122
+++L S I HRD+ + N L+D K+SDFG +R + D+ + K
Sbjct: 114 CEGMAFLESHQFI---HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVK 170
Query: 123 YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINENRL 181
+ PE F +++ KSDV++FG+++ E+ + G+ P L E L+V +RL
Sbjct: 171 WSAPEVFHYFKYSSKSDVWAFGILMWEVFSLGKMPYDLYTNSE------VVLKVSQGHRL 224
Query: 182 FEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIR 230
+ A T+ + C + +KRPT +++ + +R
Sbjct: 225 YRPHLAS----------DTIYQIMYSCWHELPEKRPTFQQLLSSIEPLR 263
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 77/158 (48%), Gaps = 14/158 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQT--EDQLPITWEIRLGIA 59
I S + H N+++L G + L+ E+ P G++++ + + + ++Q T+
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQKLSRFDEQRTATY------I 118
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E++ ALSY HS I HRDIK N+LL KI+DFG S R + G
Sbjct: 119 TELANALSYCHSKRVI---HRDIKPENLLLGSNGELKIADFGWSVHAPSSRR---DTLCG 172
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T YL PE + EK D++S GV+ E L G P
Sbjct: 173 TLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPF 210
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 89/159 (55%), Gaps = 11/159 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + H N++ +G + ++ + V ++ SL+ ++H +E + + + + IA +
Sbjct: 61 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHA-SETKFEM--KKLIDIARQ 116
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVKGT 120
+ + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+ G+
Sbjct: 117 TARGMDYLHAKS---IIHRDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGS 173
Query: 121 FGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE + S+ ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 174 ILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLP 212
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 160 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 267
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 268 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 74.3 bits (181), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 49/157 (31%), Positives = 87/157 (55%), Gaps = 11/157 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+++Q+ H N+V+LLG +E + L +V E++ GSL Y+ + L + L ++
Sbjct: 58 VMTQLRHSNLVQLLGVIVEEKGGLYIVTEYMAKGSLVDYLRSRGRSVL--GGDCLLKFSL 115
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+V A+ YL + HRD+ + N+L+ + AK+SDFG ++ + + VK T
Sbjct: 116 DVCEAMEYLEGNNFV---HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWT 172
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
PE + + F+ KSDV+SFG++L E+ + G+ P
Sbjct: 173 ----APEALREAAFSTKSDVWSFGILLWEIYSFGRVP 205
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 18/179 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVY-EFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 74 ILIHIGHHLNVVNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 133
Query: 50 --ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA 107
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R +
Sbjct: 134 DFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIX 190
Query: 108 VDRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
D + + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 191 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 249
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLG 57
I+ Q +H N++ L G + + +++ E++ NGSL ++ + T QL +G
Sbjct: 62 IMGQFDHPNIIHLEGVVTKCKPVMIITEYMENGSLDAFLRKNDGRFTVIQL-------VG 114
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + + YL + + HRD+ + NIL++ K+SDFG SR + D T
Sbjct: 115 MLRGIGSGMKYLSDMSYV---HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTR 171
Query: 118 KGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
G + PE +FT SDV+S+G+V+ E+++ G++P
Sbjct: 172 GGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 160 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 267
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 268 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 160 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKNT 216
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 267
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 268 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.3 bits (181), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 56/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 160 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 267
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 268 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 55/179 (30%), Positives = 89/179 (49%), Gaps = 18/179 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP---------- 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYK 142
Query: 50 --ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA 107
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R +
Sbjct: 143 DFLTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIY 199
Query: 108 VDRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
D + + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 200 KDPDXVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 258
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
++ Q+ H+ +V+L T+ P+ ++ E++ NGSL ++ +T + +T L +A
Sbjct: 57 LMKQLQHQRLVRLYAVV--TQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAA 112
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+++ ++++ I HR++++ANIL+ D KI+DFG +R + + K
Sbjct: 113 QIAEGMAFIEERNYI---HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFP 169
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE FT KSDV+SFG++L E++T G+ P
Sbjct: 170 IKWTAPEAINYGTFTIKSDVWSFGILLTEIVTHGRIP 206
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 74.3 bits (181), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 93/171 (54%), Gaps = 16/171 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
IL+ +NH VVKL +TE L L+ +F+ G L + ++ TE+ +++
Sbjct: 83 ILADVNHPFVVKL-HYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEE------DVKFY 135
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+A E++ L +LHS + I +RD+K NILLD++ K++DFG S+ A+D
Sbjct: 136 LA-ELALGLDHLHS---LGIIYRDLKPENILLDEEGHIKLTDFGLSKE-AIDHEKKAYSF 190
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSL 168
GT Y+ PE + +D +S+GV++ E+LTG P + + +E +L
Sbjct: 191 CGTVEYMAPEVVNRQGHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL 241
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 56 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 112 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 168
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 169 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 205
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 73.9 bits (180), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 19/163 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ + H NV+K +G + + + E+I G+L I + + Q P W R+ A +
Sbjct: 60 VMRCLEHPNVLKFIGVLYKDKRLNFITEYIKGGTLRGII-KSMDSQYP--WSQRVSFAKD 116
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT------ 115
++ ++YLHS I HRD+ S N L+ + ++DFG +R M ++T
Sbjct: 117 IASGMAYLHSMN---IIHRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKK 173
Query: 116 -------QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
V G ++ PE + EK DV+SFG+VL E++
Sbjct: 174 PDRKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 88/165 (53%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+I+ ++H ++VKL+G +E E ++ E P G L Y+ E+ ++ L + + ++
Sbjct: 61 VIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVL--TLVLYSL 116
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ A++YL S + HRDI NIL+ K+ DFG SR + + + + +
Sbjct: 117 QICKAMAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 173
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ F V + E+L+ G++P +E ++
Sbjct: 174 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 218
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 106/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ E+ G+L +Y+ + + +++I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + +I+DFG +R + +D T
Sbjct: 160 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMRIADFGLARDINNIDYYKKT 216
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 267
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 268 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGI---- 58
+ ++HRN+++L G L + + V E P GSL + + L LG
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-------LGTLSRY 116
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ-- 116
AV+V+ + YL S I HRD+ + N+LL + KI DFG R++ + H Q
Sbjct: 117 AVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 173
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
K F + PE ++ F+ SD + FGV L E+ T GQ+P
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/225 (28%), Positives = 102/225 (45%), Gaps = 21/225 (9%)
Query: 2 ILSQINHRNVVKLLGCCLE-TEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
+L ++ H N+V+ ++ T L +V E+ G L I + T+++ + E L +
Sbjct: 58 LLRELKHPNIVRYYDRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVM 117
Query: 60 VEVSGALSYLH--SAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+++ AL H S + HRD+K AN+ LD K K+ DFG +R + D +
Sbjct: 118 TQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDED-FAKEF 176
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVIN 177
GT Y+ PE + EKSD++S G +L EL P +E LA I
Sbjct: 177 VGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE---LAG----KIR 229
Query: 178 ENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E + + E E+IT R LNL RP+++E+
Sbjct: 230 EGKFRRI---PYRYSDELNEIIT------RMLNLKDYHRPSVEEI 265
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 88/165 (53%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+I+ ++H ++VKL+G +E E ++ E P G L Y+ E+ ++ L + + ++
Sbjct: 65 VIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVL--TLVLYSL 120
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ A++YL S + HRDI NIL+ K+ DFG SR + + + + +
Sbjct: 121 QICKAMAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 177
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ F V + E+L+ G++P +E ++
Sbjct: 178 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 222
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 88/165 (53%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+I+ ++H ++VKL+G +E E ++ E P G L Y+ E+ ++ L + + ++
Sbjct: 77 VIMKNLDHPHIVKLIGI-IEEEPTWIIMELYPYGELGHYL-ERNKNSLKVL--TLVLYSL 132
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ A++YL S + HRDI NIL+ K+ DFG SR + + + + +
Sbjct: 133 QICKAMAYLESINCV---HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLP 189
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ F V + E+L+ G++P +E ++
Sbjct: 190 IKWMSPESINFRRFTTASDVWMFAVCMWEILSFGKQPFFWLENKD 234
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGI---- 58
+ ++HRN+++L G L + + V E P GSL + + L LG
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-------LGTLSRY 126
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ-- 116
AV+V+ + YL S I HRD+ + N+LL + KI DFG R++ + H Q
Sbjct: 127 AVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEH 183
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
K F + PE ++ F+ SD + FGV L E+ T GQ+P
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGI---- 58
+ ++HRN+++L G L + + V E P GSL + + L LG
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-------LGTLSRY 116
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ-- 116
AV+V+ + YL S I HRD+ + N+LL + KI DFG R++ + H Q
Sbjct: 117 AVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
K F + PE ++ F+ SD + FGV L E+ T GQ+P
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 73.6 bits (179), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 58 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 114 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 170
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 171 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L++ + +P G L Y+ E ++ I + L V+
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 129
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 130 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 186
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 234
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 235 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 278
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGI---- 58
+ ++HRN+++L G L + + V E P GSL + + L LG
Sbjct: 65 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-------LGTLSRY 116
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ-- 116
AV+V+ + YL S I HRD+ + N+LL + KI DFG R++ + H Q
Sbjct: 117 AVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 173
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
K F + PE ++ F+ SD + FGV L E+ T GQ+P
Sbjct: 174 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 214
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 117/264 (44%), Gaps = 34/264 (12%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I++ N VV+L + + +V E++P G L ++ + +P W E
Sbjct: 128 IMAFANSPWVVQLFCAFQDDKYLYMVMEYMPGGDL---VNLMSNYDVPEKWAKFY--TAE 182
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRT---HLTTQVK 118
V AL +HS I HRD+K N+LLD K++DFGT M +D T H T V
Sbjct: 183 VVLALDAIHSMGLI---HRDVKPDNMLLDKHGHLKLADFGT--CMKMDETGMVHCDTAV- 236
Query: 119 GTFGYLDPEYFQS----SQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQ 174
GT Y+ PE +S + + D +S GV L E+L G P SL + +
Sbjct: 237 GTPDYISPEVLKSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA------DSLVGTYSK 290
Query: 175 VIN-ENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNL--NG----KKRPTMKEVALELA 227
+++ +N L DA++ + A+ + A + R + L NG K+ P K
Sbjct: 291 IMDHKNSLCFPEDAEISKHAKN---LICAFLTDREVRLGRNGVEEIKQHPFFKNDQWNWD 347
Query: 228 GIRASIGASVLRQCEEIDFVNYDN 251
IR + V +ID N+D+
Sbjct: 348 NIRETAAPVVPELSSDIDSSNFDD 371
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGI---- 58
+ ++HRN+++L G L + + V E P GSL + + L LG
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-------LGTLSRY 120
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ-- 116
AV+V+ + YL S I HRD+ + N+LL + KI DFG R++ + H Q
Sbjct: 121 AVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
K F + PE ++ F+ SD + FGV L E+ T GQ+P
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L++ + +P G L Y+ E ++ I + L V+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 128
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 129 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 233
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 234 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 277
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L++ + +P G L Y+ E ++ I + L V+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 125
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 126 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 230
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 231 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L++ + +P G L Y+ E ++ I + L V+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 127
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 128 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 232
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 233 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 276
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L++ + +P G L Y+ E ++ I + L V+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 127
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 128 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 184
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 232
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 233 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 276
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L++ + +P G L Y+ E ++ I + L V+
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDN---IGSQYLLNWCVQ 126
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 127 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 231
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 232 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 275
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +NH NVVK G E + L E+ G L I + + +P R +
Sbjct: 57 INKMLNHENVVKFYGHRREGNIQYLFLEYCSGGELFDRI--EPDIGMPEPDAQRF--FHQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV-DRTHLTTQVKGT 120
+ + YLH I I HRDIK N+LLD++ KISDFG + +R L ++ GT
Sbjct: 113 LMAGVVYLHG---IGITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGT 169
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKP 156
Y+ PE + +F E DV+S G+VL +L G+ P
Sbjct: 170 LPYVAPELLKRREFHAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 73.2 bits (178), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 2 ILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTE------DQLPITWEI 54
I+S + H N+V LLG C L++ E+ G L ++ + E D P+
Sbjct: 94 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 153
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
L + +V+ +++L S I HRD+ + N+LL + + AKI DFG +R + D ++
Sbjct: 154 LLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI- 209
Query: 115 TQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
VKG ++ PE +T +SDV+S+G++L E+ +
Sbjct: 210 --VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 249
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L++ + +P G L Y+ E ++ I + L V+
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 132
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 133 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 237
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 238 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 281
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGI---- 58
+ ++HRN+++L G L + + V E P GSL + + L LG
Sbjct: 75 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-------LGTLSRY 126
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ-- 116
AV+V+ + YL S I HRD+ + N+LL + KI DFG R++ + H Q
Sbjct: 127 AVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 183
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
K F + PE ++ F+ SD + FGV L E+ T GQ+P
Sbjct: 184 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 224
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L++ + +P G L Y+ E ++ I + L V+
Sbjct: 71 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 126
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 127 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 183
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 184 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 231
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 232 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 275
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 110/233 (47%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L++ + +P G L Y+ E ++ I + L V+
Sbjct: 74 VMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 129
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 130 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 186
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 187 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 234
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 235 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 278
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/161 (32%), Positives = 79/161 (49%), Gaps = 18/161 (11%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGI---- 58
+ ++HRN+++L G L + + V E P GSL + + L LG
Sbjct: 69 MHSLDHRNLIRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGHFL-------LGTLSRY 120
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ-- 116
AV+V+ + YL S I HRD+ + N+LL + KI DFG R++ + H Q
Sbjct: 121 AVQVAEGMGYLESKRFI---HRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEH 177
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
K F + PE ++ F+ SD + FGV L E+ T GQ+P
Sbjct: 178 RKVPFAWCAPESLKTRTFSHASDTWMFGVTLWEMFTYGQEP 218
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 66 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 125
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R D
Sbjct: 126 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDX 178
Query: 116 QVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLA 169
KG G ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----- 233
Query: 170 AYFLQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 234 --VLRFVMEGGLLDKPDNCPDMLLE-----------LMRMCWQYNPKMRPSFLEI 275
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 83/162 (51%), Gaps = 17/162 (10%)
Query: 2 ILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTE------DQLPITWEI 54
I+S + H N+V LLG C L++ E+ G L ++ + E D P+
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRD 161
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
L + +V+ +++L S I HRD+ + N+LL + + AKI DFG +R + D ++
Sbjct: 162 LLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI- 217
Query: 115 TQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
VKG ++ PE +T +SDV+S+G++L E+ +
Sbjct: 218 --VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 257
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/235 (25%), Positives = 106/235 (45%), Gaps = 39/235 (16%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R D
Sbjct: 135 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTR----DIXETDX 187
Query: 116 QVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLA 169
KG G ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 188 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----- 242
Query: 170 AYFLQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 243 --VLRFVMEGGLLDKPDNCPDMLFE-----------LMRMCWQYNPKMRPSFLEI 284
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 104/222 (46%), Gaps = 23/222 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+++ + + N+V L L + +V E++ GSL + E D+ I +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCR 123
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
E AL +LHS I HRDIKS NILL K++DFG + +++ +T V GT
Sbjct: 124 ECLQALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GT 179
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENR 180
++ PE + K D++S G++ +E++ G+ P EN A Y I N
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY----LNENPLRALYL---IATNG 232
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E L+ EK I + RCL+++ +KR + KE+
Sbjct: 233 TPE------LQNPEKLSAIFRDFL-NRCLDMDVEKRGSAKEL 267
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 64 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 119
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 120 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 176
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 177 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 224
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 225 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 268
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDN---IGSQYLLNWCVQ 125
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 126 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 230
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 231 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 125
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 126 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 182
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 230
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 231 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 76 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 131
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 132 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 188
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 189 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 236
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 237 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 280
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 128
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 129 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 233
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 234 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 277
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGIA 59
+L + H N++ +G + ++ + V ++ SL+ ++H E + + + + IA
Sbjct: 77 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIA 130
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVK 118
+ + + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+
Sbjct: 131 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 187
Query: 119 GTFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
G+ ++ PE + + ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 188 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 228
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 132
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 133 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVP 189
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 237
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 238 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 281
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 73 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 128
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 129 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 185
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 186 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 233
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 234 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 277
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 125
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 126 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 230
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 231 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 70 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 125
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 126 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 182
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 183 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 230
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 231 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 274
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 132
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 133 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 237
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 238 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 281
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 95 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 151 IAKGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 207
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 208 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 255
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 256 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 299
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 77 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 132
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 133 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 189
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 190 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 237
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 238 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 281
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 113/253 (44%), Gaps = 32/253 (12%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + N +V G + E + GSL Q + + I +I +++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V L+YL I HRD+K +NIL++ + K+ DFG S + +D + GT
Sbjct: 113 VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTR 167
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVET-EENRSLAAYFLQVINENR 180
Y+ PE Q + ++ +SD++S G+ LVE+ G+ PI + E++R A
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKEDSRPPMA---------- 217
Query: 181 LFEVLDAQVLREAEKEEVITVAM----VAKRCLNLNGKKRPTMKEVALELAGIRASIGAS 236
+FE+LD V K ++ +CL N +R +K++ + A I+ S
Sbjct: 218 IFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH-AFIKRS---- 272
Query: 237 VLRQCEEIDFVNY 249
EE+DF +
Sbjct: 273 ---DAEEVDFAGW 282
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 104 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 159
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 160 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 216
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 217 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 264
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 265 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 308
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGIA 59
+L + H N++ +G + ++ + V ++ SL+ ++H E + + + + IA
Sbjct: 57 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIA 110
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVK 118
+ + + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+
Sbjct: 111 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 167
Query: 119 GTFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
G+ ++ PE + + ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 72 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 127
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 128 IAKGMNYLEDRR---LVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 184
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 185 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 232
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 233 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 276
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGIA 59
+L + H N++ +G + ++ + V ++ SL+ ++H E + + + + IA
Sbjct: 85 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIA 138
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVK 118
+ + + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+
Sbjct: 139 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLS 195
Query: 119 GTFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
G+ ++ PE + + ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 2 ILSQINHRNVVKL------LGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR 55
I+ ++NH NVV L ++PLL E+ G L +Y++ Q E+ +
Sbjct: 65 IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-QFENCCGLKEGPI 123
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD---DKYRAKISDFGTSRSMAVDRTH 112
+ ++S AL YLH I HRD+K NI+L + KI D G ++ + D+
Sbjct: 124 RTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGE 178
Query: 113 LTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
L T+ GT YL PE + ++T D +SFG + E +TG +P
Sbjct: 179 LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 56/233 (24%), Positives = 109/233 (46%), Gaps = 35/233 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++ +++ +V +LLG CL + V L+ + +P G L Y+ E ++ I + L V+
Sbjct: 67 VMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDN---IGSQYLLNWCVQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLTTQVKGT 120
++ ++YL + HRD+ + N+L+ KI+DFG ++ + A ++ + K
Sbjct: 123 IAEGMNYLEDRRLV---HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVP 179
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
++ E +T +SDV+S+GV + EL+T G KP + E S
Sbjct: 180 IKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISS------------ 227
Query: 180 RLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
+L + E+ I V M+ +C ++ RP +E+ +E +
Sbjct: 228 ---------ILEKGERLPQPPICTIDVYMIMVKCWMIDADSRPKFRELIIEFS 271
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 7 NHRNVVKLLGCCLETEVPLL-VYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGA 65
NH +V L C +TE L V E++ G L H Q + +LP E + E+S A
Sbjct: 79 NHPFLVGL-HSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPE--EHARFYSAEISLA 133
Query: 66 LSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLD 125
L+YLH I +RD+K N+LLD + K++D+G + + T+ GT Y+
Sbjct: 134 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIA 189
Query: 126 PEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEEN--RSLAAYFLQVINENRLFE 183
PE + + D ++ GV++ E++ G+ P +V + +N ++ Y QVI E ++
Sbjct: 190 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-- 247
Query: 184 VLDAQVLREAEKEEVITVAMVAKRCLNLNGKKR 216
+ + A V K LN + K+R
Sbjct: 248 --------RIPRSMSVKAASVLKSFLNKDPKER 272
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 72.8 bits (177), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/164 (31%), Positives = 81/164 (49%), Gaps = 15/164 (9%)
Query: 2 ILSQINHRNVVKL------LGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR 55
I+ ++NH NVV L ++PLL E+ G L +Y++ Q E+ +
Sbjct: 66 IMKKLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-QFENCCGLKEGPI 124
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD---DKYRAKISDFGTSRSMAVDRTH 112
+ ++S AL YLH I HRD+K NI+L + KI D G ++ + D+
Sbjct: 125 RTLLSDISSALRYLHENR---IIHRDLKPENIVLQPGPQRLIHKIIDLGYAKEL--DQGE 179
Query: 113 LTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
L T+ GT YL PE + ++T D +SFG + E +TG +P
Sbjct: 180 LCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ + G+L +Y+ + + +++I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 160 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 267
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 268 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 78/157 (49%), Gaps = 11/157 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
++LS + H ++++ G + + ++ ++I G L + + P+ A
Sbjct: 58 LMLSIVTHPFIIRMWGTFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVA----KFYAA 113
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
EV AL YLHS I +RD+K NILLD KI+DFG ++ + +T + GT
Sbjct: 114 EVCLALEYLHSKD---IIYRDLKPENILLDKNGHIKITDFGFAKYVP----DVTYXLCGT 166
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
Y+ PE + + + D +SFG+++ E+L G P
Sbjct: 167 PDYIAPEVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 33/232 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R + + +
Sbjct: 128 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRK 183
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYF 172
KG ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------V 236
Query: 173 LQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 237 LRFVMEGGLLDKPDNCPDMLFE-----------LMRMCWQYNPKMRPSFLEI 277
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 7 NHRNVVKLLGCCLETEVPLL-VYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGA 65
NH +V L C +TE L V E++ G L H Q + +LP E + E+S A
Sbjct: 68 NHPFLVGL-HSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPE--EHARFYSAEISLA 122
Query: 66 LSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLD 125
L+YLH I +RD+K N+LLD + K++D+G + + T+ GT Y+
Sbjct: 123 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIA 178
Query: 126 PEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEEN--RSLAAYFLQVINENRLFE 183
PE + + D ++ GV++ E++ G+ P +V + +N ++ Y QVI E ++
Sbjct: 179 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-- 236
Query: 184 VLDAQVLREAEKEEVITVAMVAKRCLNLNGKKR 216
+ + A V K LN + K+R
Sbjct: 237 --------RIPRSLSVKAASVLKSFLNKDPKER 261
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 33/232 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 72 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 131
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R + + +
Sbjct: 132 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRK 187
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYF 172
KG ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 188 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------V 240
Query: 173 LQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 241 LRFVMEGGLLDKPDNCPDMLFE-----------LMRMCWQYNPKMRPSFLEI 281
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 33/232 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R + + +
Sbjct: 134 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRK 189
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYF 172
KG ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------V 242
Query: 173 LQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 243 LRFVMEGGLLDKPDNCPDMLFE-----------LMRMCWQYNPKMRPSFLEI 283
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 101/213 (47%), Gaps = 22/213 (10%)
Query: 7 NHRNVVKLLGCCLETEVPLL-VYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGA 65
NH +V L C +TE L V E++ G L H Q + +LP E + E+S A
Sbjct: 64 NHPFLVGL-HSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPE--EHARFYSAEISLA 118
Query: 66 LSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLD 125
L+YLH I +RD+K N+LLD + K++D+G + + T+ GT Y+
Sbjct: 119 LNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSXFCGTPNYIA 174
Query: 126 PEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEEN--RSLAAYFLQVINENRLFE 183
PE + + D ++ GV++ E++ G+ P +V + +N ++ Y QVI E ++
Sbjct: 175 PEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILEKQI-- 232
Query: 184 VLDAQVLREAEKEEVITVAMVAKRCLNLNGKKR 216
+ + A V K LN + K+R
Sbjct: 233 --------RIPRSLSVKAASVLKSFLNKDPKER 257
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/218 (27%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLL-VYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ Q ++ + L C +TE L V E++ G L H Q + +LP E +
Sbjct: 105 VFEQASNHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQRQRKLPE--EHARFYSA 160
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
E+S AL+YLH I +RD+K N+LLD + K++D+G + + T+ GT
Sbjct: 161 EISLALNYLHERG---IIYRDLKLDNVLLDSEGHIKLTDYGMCKE-GLRPGDTTSTFCGT 216
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEEN--RSLAAYFLQVINE 178
Y+ PE + + D ++ GV++ E++ G+ P +V + +N ++ Y QVI E
Sbjct: 217 PNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFDIVGSSDNPDQNTEDYLFQVILE 276
Query: 179 NRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKR 216
++ ++ R + A V K LN + K+R
Sbjct: 277 KQI------RIPRSLS----VKAASVLKSFLNKDPKER 304
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 33/232 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 74 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 133
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R + + +
Sbjct: 134 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRK 189
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYF 172
KG ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 190 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------V 242
Query: 173 LQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 243 LRFVMEGGLLDKPDNCPDMLFE-----------LMRMCWQYNPKMRPSFLEI 283
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 33/232 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 75 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 134
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R + + +
Sbjct: 135 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRK 190
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYF 172
KG ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 191 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------V 243
Query: 173 LQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 244 LRFVMEGGLLDKPDNCPDMLFE-----------LMRMCWQYNPKMRPSFLEI 284
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 33/232 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 140
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R + + +
Sbjct: 141 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRK 196
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYF 172
KG ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------V 249
Query: 173 LQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 250 LRFVMEGGLLDKPDNCPDMLFE-----------LMRMCWQYNPKMRPSFLEI 290
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 107/232 (46%), Gaps = 33/232 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 103 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 162
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R + + +
Sbjct: 163 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRK 218
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYF 172
KG ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 219 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------V 271
Query: 173 LQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 272 LRFVMEGGLLDKPDNCPDMLFE-----------LMRMCWQYNPKMRPSFLEI 312
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGIA 59
+L + H N++ +G + ++ + V ++ SL+ ++H E + + + + IA
Sbjct: 84 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIA 137
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVK 118
+ + + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+
Sbjct: 138 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 194
Query: 119 GTFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
G+ ++ PE + + ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 195 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 235
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGIA 59
+L + H N++ +G + ++ + V ++ SL+ ++H E + + + + IA
Sbjct: 57 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIA 110
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVK 118
+ + + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+
Sbjct: 111 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 119 GTFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
G+ ++ PE + + ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGAL 66
N +N + CL + EF G+L Q+I ++ ++L + L + +++ +
Sbjct: 97 NSKNSSRSKTKCL-----FIQMEFCDKGTLEQWIEKRRGEKLDKV--LALELFEQITKGV 149
Query: 67 SYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDP 126
Y+HS I HRD+K +NI L D + KI DFG S+ D T+ KGT Y+ P
Sbjct: 150 DYIHSKKLI---HRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR--TRSKGTLRYMSP 204
Query: 127 EYFQSSQFTEKSDVYSFGVVLVELL 151
E S + ++ D+Y+ G++L ELL
Sbjct: 205 EQISSQDYGKEVDLYALGLILAELL 229
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGIA 59
+L + H N++ +G + ++ + V ++ SL+ ++H E + + + + IA
Sbjct: 59 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIA 112
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVK 118
+ + + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+
Sbjct: 113 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 169
Query: 119 GTFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
G+ ++ PE + + ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 170 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 210
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGIA 59
+L + H N++ +G + ++ + V ++ SL+ ++H E + + + + IA
Sbjct: 85 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIA 138
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVK 118
+ + + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+
Sbjct: 139 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 195
Query: 119 GTFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
G+ ++ PE + + ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 196 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 236
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 55/236 (23%), Positives = 105/236 (44%), Gaps = 33/236 (13%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR------------ 55
H+N++ LLG C + ++ + G+L +Y+ + + +++I
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLT 114
+ +++ + YL S I HRD+ + N+L+ + KI+DFG +R + +D T
Sbjct: 160 VSCTYQLARGMEYLASQKCI---HRDLAARNVLVTENNVMKIADFGLARDINNIDYYKKT 216
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFL 173
T + ++ PE +T +SDV+SFGV++ E+ T G P + EE
Sbjct: 217 TNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEE--------- 267
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
LF++L + + M+ + C + +RPT K++ +L I
Sbjct: 268 -------LFKLLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 72.0 bits (175), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 35/262 (13%)
Query: 3 LSQINHRNVVKLLGCCLETE------VPLLVYEFIPNGSLHQYIHE----QTEDQLPITW 52
+ + +H +V KL+G L + +P+++ F+ +G LH ++ + LP+
Sbjct: 79 MKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQT 138
Query: 53 EIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-AVDRT 111
+R V+++ + YL S I HRD+ + N +L + ++DFG SR + + D
Sbjct: 139 LVRF--MVDIACGMEYLSSRNFI---HRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYY 193
Query: 112 HLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAA 170
K +L E + +T SDV++FGV + E++T GQ P +E E
Sbjct: 194 RQGCASKLPVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIENAE------ 247
Query: 171 YFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIR 230
+ +I NRL + + EEV + +C + + K+RP+ + +EL I
Sbjct: 248 IYNYLIGGNRLKQPPECM-------EEVYDLMY---QCWSADPKQRPSFTCLRMELENIL 297
Query: 231 ASIGASVLRQCEEIDFVNYDNA 252
+ SVL ++ ++N + A
Sbjct: 298 GHL--SVLSTSQDPLYINIERA 317
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGIA 59
+L + H N++ +G + ++ + V ++ SL+ ++H E + + + + IA
Sbjct: 62 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIA 115
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVK 118
+ + + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+
Sbjct: 116 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 119 GTFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
G+ ++ PE + + ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 87/161 (54%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGIA 59
+L + H N++ +G + ++ + V ++ SL+ ++H E + + + + IA
Sbjct: 62 VLRKTRHVNILLFMGYSTKPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIA 115
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVK 118
+ + + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+
Sbjct: 116 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 172
Query: 119 GTFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
G+ ++ PE + + ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 173 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 213
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 31/223 (13%)
Query: 10 NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIRLGIAVEVS 63
+VV+LLG + + L+V E + +G L Y+ E + P T + + +A E++
Sbjct: 81 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 140
Query: 64 GALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFG- 122
++YL++ + HR++ + N ++ + KI DFG +R + + + KG
Sbjct: 141 DGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPV 196
Query: 123 -YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI-NENR 180
++ PE + FT SD++SFGVVL E+ SLA Q + NE
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEIT---------------SLAEQPYQGLSNEQV 241
Query: 181 LFEVLDAQVLREAEK-EEVITVAMVAKRCLNLNGKKRPTMKEV 222
L V+D L + + E +T M + C N RPT E+
Sbjct: 242 LKFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPNMRPTFLEI 282
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.0 bits (175), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 61/223 (27%), Positives = 103/223 (46%), Gaps = 31/223 (13%)
Query: 10 NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIRLGIAVEVS 63
+VV+LLG + + L+V E + +G L Y+ E + P T + + +A E++
Sbjct: 82 HVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIA 141
Query: 64 GALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFG- 122
++YL++ + HR++ + N ++ + KI DFG +R + + + KG
Sbjct: 142 DGMAYLNAKKFV---HRNLAARNCMVAHDFTVKIGDFGMTRDI-YETDYYRKGGKGLLPV 197
Query: 123 -YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI-NENR 180
++ PE + FT SD++SFGVVL E+ SLA Q + NE
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEIT---------------SLAEQPYQGLSNEQV 242
Query: 181 LFEVLDAQVLREAEK-EEVITVAMVAKRCLNLNGKKRPTMKEV 222
L V+D L + + E +T M + C N RPT E+
Sbjct: 243 LKFVMDGGYLDQPDNCPERVTDLM--RMCWQFNPNMRPTFLEI 283
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 71.6 bits (174), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 86/161 (53%), Gaps = 15/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGIA 59
+L + H N++ +G ++ + V ++ SL+ ++H E + + + + IA
Sbjct: 57 VLRKTRHVNILLFMGYSTAPQLAI-VTQWCEGSSLYHHLHIIETKFEMIKL-----IDIA 110
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVK 118
+ + + YLH+ + I HRD+KS NI L + KI DFG + + +H Q+
Sbjct: 111 RQTAQGMDYLHAKS---IIHRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLS 167
Query: 119 GTFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
G+ ++ PE + + ++ +SDVY+FG+VL EL+TGQ P
Sbjct: 168 GSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLP 208
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 71.2 bits (173), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + N +V G + E + GSL Q + E I EI +++
Sbjct: 67 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKEAKR----IPEEILGKVSIA 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V L+YL I HRD+K +NIL++ + K+ DFG S + +D + GT
Sbjct: 123 VLRGLAYLREKHQI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTR 177
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE 164
Y+ PE Q + ++ +SD++S G+ LVEL G+ PI + +E
Sbjct: 178 SYMAPERLQGTHYSVQSDIWSMGLSLVELAVGRYPIPPPDAKE 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 82/165 (49%), Gaps = 23/165 (13%)
Query: 3 LSQINHRNVVKLLGCC----------------LETEVPLLVYEFIPNGSLHQYIHEQTED 46
L++++H N+V GC +T+ + EF G+L Q+I ++ +
Sbjct: 58 LAKLDHVNIVHYNGCWDGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE 117
Query: 47 QLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM 106
+L + L + +++ + Y+HS I +RD+K +NI L D + KI DFG S+
Sbjct: 118 KLDKV--LALELFEQITKGVDYIHSKKLI---NRDLKPSNIFLVDTKQVKIGDFGLVTSL 172
Query: 107 AVDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
D + KGT Y+ PE S + ++ D+Y+ G++L ELL
Sbjct: 173 KNDGKRXRS--KGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 70.9 bits (172), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 106/232 (45%), Gaps = 33/232 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------EQTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ E P +
Sbjct: 68 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKM 127
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N + + + KI DFG +R + + +
Sbjct: 128 IQMAGEIADGMAYLNANKFV---HRDLAARNCXVAEDFTVKIGDFGMTRDI-YETDYYRK 183
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYF 172
KG ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 184 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------V 236
Query: 173 LQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 237 LRFVMEGGLLDKPDNCPDMLLE-----------LMRMCWQYNPKMRPSFLEI 277
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 88/162 (54%), Gaps = 15/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q H N+++L G + +++ EF+ NG+L ++ + Q + I+L G+
Sbjct: 68 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTV---IQLVGMLR 123
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQV 117
++ + YL A + HRD+ + NIL++ K+SDFG SR + + D T+ T+ +
Sbjct: 124 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTY-TSSL 179
Query: 118 KGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
G + PE +FT SD +S+G+V+ E+++ G++P
Sbjct: 180 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 70.9 bits (172), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+++ + + N+V L L + +V E++ GSL + E D+ I +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCR 123
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
E AL +LHS I HRDIKS NILL K++DFG + +++ + V GT
Sbjct: 124 ECLQALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMV-GT 179
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENR 180
++ PE + K D++S G++ +E++ G+ P EN A Y I N
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY----LNENPLRALYL---IATNG 232
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E L+ EK I + RCL+++ +KR + KE+
Sbjct: 233 TPE------LQNPEKLSAIFRDFL-NRCLDMDVEKRGSAKEL 267
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 23/231 (9%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGS---LHQYIHEQTEDQLPITWEIRLG-I 58
+SQ +H N+V + + LV + + GS + ++I + E + + E + I
Sbjct: 62 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 121
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA----VDRTHLT 114
EV L YLH I HRD+K+ NILL + +I+DFG S +A + R +
Sbjct: 122 LREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 178
Query: 115 TQVKGTFGYLDPEYF-QSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFL 173
GT ++ PE Q + K+D++SFG+ +EL TG P + + L
Sbjct: 179 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH-----KYPPMKVLML 233
Query: 174 QVINENRLFE--VLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ N+ E V D ++L++ K +++ CL + +KRPT E+
Sbjct: 234 TLQNDPPSLETGVQDKEMLKKYGKSFRKMISL----CLQKDPEKRPTAAEL 280
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 33/232 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE------QTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ P +
Sbjct: 71 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 130
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R + + +
Sbjct: 131 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRK 186
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYF 172
KG ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 187 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------V 239
Query: 173 LQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 240 LRFVMEGGLLDKPDNCPDMLFE-----------LMRMCWQYNPKMRPSFLEI 280
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 103/222 (46%), Gaps = 23/222 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+++ + + N+V L L + +V E++ GSL + E D+ I +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCR 124
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
E AL +LHS I HR+IKS NILL K++DFG + +++ +T V GT
Sbjct: 125 ECLQALEFLHSNQVI---HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GT 180
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENR 180
++ PE + K D++S G++ +E++ G+ P EN A Y I N
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY----LNENPLRALYL---IATNG 233
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E L+ EK I + RCL ++ +KR + KE+
Sbjct: 234 TPE------LQNPEKLSAIFRDFL-NRCLEMDVEKRGSAKEL 268
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/232 (24%), Positives = 106/232 (45%), Gaps = 33/232 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE------QTEDQLPITWEIR 55
++ + N +VV+LLG + + L++ E + G L Y+ P +
Sbjct: 81 VMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKM 140
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
+ +A E++ ++YL++ + HRD+ + N ++ + + KI DFG +R + + +
Sbjct: 141 IQMAGEIADGMAYLNANKFV---HRDLAARNCMVAEDFTVKIGDFGMTRDI-YETDYYRK 196
Query: 116 QVKGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYF 172
KG ++ PE + FT SDV+SFGVVL E+ T ++P + + E+
Sbjct: 197 GGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ-------V 249
Query: 173 LQVINENRLFEVLD--AQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ + E L + D +L E + + C N K RP+ E+
Sbjct: 250 LRFVMEGGLLDKPDNCPDMLFE-----------LMRMCWQYNPKMRPSFLEI 290
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I+ ++ H +V+L E + +V E++ GSL ++ + L + + +A +
Sbjct: 57 IMKKLKHDKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKDGEGRALKLP--NLVDMAAQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V+ ++Y+ I HRD++SANIL+ + KI+DFG +R + + K
Sbjct: 114 VAAGMAYIERMNYI---HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPI 170
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL+T
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELVT 201
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL C + E + NG L +YI + T R A E
Sbjct: 90 VMSRLDHPFFVKLYFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 145
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 146 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 202
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 203 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 240
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+++ + + N+V L L + +V E++ GSL + E D+ I +
Sbjct: 69 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCR 123
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
E AL +LHS I HRDIKS NILL K++DFG + +++ + V GT
Sbjct: 124 ECLQALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GT 179
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENR 180
++ PE + K D++S G++ +E++ G+ P EN A Y I N
Sbjct: 180 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY----LNENPLRALYL---IATNG 232
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E L+ EK I + RCL ++ +KR + KE+
Sbjct: 233 TPE------LQNPEKLSAIFRDFL-NRCLEMDVEKRGSAKEL 267
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 62/222 (27%), Positives = 102/222 (45%), Gaps = 23/222 (10%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+++ + + N+V L L + +V E++ GSL + E D+ I +
Sbjct: 70 LVMRENKNPNIVNYLDSYLVGDELWVVMEYLAGGSLTDVVTETCMDEGQIA-----AVCR 124
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
E AL +LHS I HRDIKS NILL K++DFG + +++ + V GT
Sbjct: 125 ECLQALEFLHSNQVI---HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMV-GT 180
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENR 180
++ PE + K D++S G++ +E++ G+ P EN L A +L N
Sbjct: 181 PYWMAPEVVTRKAYGPKVDIWSLGIMAIEMIEGEPPY----LNEN-PLRALYLIATN--- 232
Query: 181 LFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L+ EK I + RCL ++ +KR + KE+
Sbjct: 233 -----GTPELQNPEKLSAIFRDFL-NRCLEMDVEKRGSAKEL 268
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/231 (27%), Positives = 108/231 (46%), Gaps = 23/231 (9%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGS---LHQYIHEQTEDQLPITWEIRLG-I 58
+SQ +H N+V + + LV + + GS + ++I + E + + E + I
Sbjct: 67 MSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATI 126
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA----VDRTHLT 114
EV L YLH I HRD+K+ NILL + +I+DFG S +A + R +
Sbjct: 127 LREVLEGLEYLHKNGQI---HRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVR 183
Query: 115 TQVKGTFGYLDPEYF-QSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFL 173
GT ++ PE Q + K+D++SFG+ +EL TG P + + L
Sbjct: 184 KTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITAIELATGAAPYH-----KYPPMKVLML 238
Query: 174 QVINENRLFE--VLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ N+ E V D ++L++ K +++ CL + +KRPT E+
Sbjct: 239 TLQNDPPSLETGVQDKEMLKKYGKSFRKMISL----CLQKDPEKRPTAAEL 285
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLASLILYAY 498
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M + ++ K
Sbjct: 499 QLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 87/162 (53%), Gaps = 15/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL-GIAV 60
I+ Q H N+++L G + +++ EF+ NG+L ++ + Q + I+L G+
Sbjct: 70 IMGQFEHPNIIRLEGVVTNSMPVMILTEFMENGALDSFLR-LNDGQFTV---IQLVGMLR 125
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQV 117
++ + YL A + HRD+ + NIL++ K+SDFG SR + + D T T+ +
Sbjct: 126 GIASGMRYL---AEMSYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTE-TSSL 181
Query: 118 KGTFG--YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
G + PE +FT SD +S+G+V+ E+++ G++P
Sbjct: 182 GGKIPIRWTAPEAIAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAY 118
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M + ++ K
Sbjct: 119 QLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 70.1 bits (170), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 81/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLASLILYAY 118
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M ++ K
Sbjct: 119 QLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLP 175
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 65 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAY 120
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M + ++ K
Sbjct: 121 QLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 177
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 178 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 222
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLASLILYAY 118
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M + ++ K
Sbjct: 119 QLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 60 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAY 115
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M + ++ K
Sbjct: 116 QLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 172
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 173 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 217
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 63 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAY 118
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M + ++ K
Sbjct: 119 QLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 175
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 176 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 220
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 91 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAY 146
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M + ++ K
Sbjct: 147 QLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 203
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 204 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 248
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 66 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAY 121
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M + ++ K
Sbjct: 122 QLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 178
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 179 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 223
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 68 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KYSLDLASLILYAY 123
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M + ++ K
Sbjct: 124 QLSTALAYLESKRFV---HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLP 180
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 181 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 225
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 44/275 (16%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + N +V G + E + GSL Q + + I +I +++
Sbjct: 119 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 174
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V L+YL I HRD+K +NIL++ + K+ DFG S + +D + GT
Sbjct: 175 VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTR 229
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE----------------- 164
Y+ PE Q + ++ +SD++S G+ LVE+ G+ PI + +E
Sbjct: 230 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 289
Query: 165 ------NRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAM----VAKRCLNLNGK 214
R L++Y + +FE+LD V K ++ +CL N
Sbjct: 290 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPA 349
Query: 215 KRPTMKEVALELAGIRASIGASVLRQCEEIDFVNY 249
+R +K++ + A I+ S EE+DF +
Sbjct: 350 ERADLKQLMVH-AFIKRS-------DAEEVDFAGW 376
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/185 (24%), Positives = 93/185 (50%), Gaps = 25/185 (13%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL------------- 48
++++ ++ N+VKLLG C + L++E++ G L++++ + +
Sbjct: 103 LMAEFDNPNIVKLLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRAR 162
Query: 49 -------PITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFG 101
P++ +L IA +V+ ++YL + HRD+ + N L+ + KI+DFG
Sbjct: 163 VSSPGPPPLSCAEQLCIARQVAAGMAYLSERKFV---HRDLATRNCLVGENMVVKIADFG 219
Query: 102 TSRSM-AVDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRL 159
SR++ + D ++ PE +++T +SDV+++GVVL E+ + G +P
Sbjct: 220 LSRNIYSADYYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYG 279
Query: 160 VETEE 164
+ EE
Sbjct: 280 MAHEE 284
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 13/158 (8%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE--QTEDQLPITWEIRLGI 58
+I+ H NVV++ L E ++ EF+ G+L + + E+Q+ E
Sbjct: 94 VIMRDYQHFNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVRLNEEQIATVCE----- 148
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
V AL+YLH+ I HRDIKS +ILL R K+SDFG ++ D V
Sbjct: 149 --AVLQALAYLHAQGVI---HRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV- 202
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE S + + D++S G++++E++ G+ P
Sbjct: 203 GTPYWMAPEVISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 106/236 (44%), Gaps = 41/236 (17%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE---QTEDQLPITWEIRLGI 58
+++ + V +LLG CL + V LV + +P G L ++ E + Q + W
Sbjct: 72 VMAGVGSPYVSRLLGICLTSTV-QLVTQLMPYGCLLDHVRENRGRLGSQDLLNW------ 124
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRT-HLTTQV 117
++++ +SYL + + HRD+ + N+L+ KI+DFG +R + +D T +
Sbjct: 125 CMQIAKGMSYLED---VRLVHRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGG 181
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVI 176
K ++ E +FT +SDV+S+GV + EL+T G KP + E L
Sbjct: 182 KVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL-------- 233
Query: 177 NENRLFEVLDAQVLREAEKEE-----VITVAMVAKRCLNLNGKKRPTMKEVALELA 227
L + E+ I V M+ +C ++ + RP +E+ E +
Sbjct: 234 -------------LEKGERLPQPPICTIDVYMIMVKCWMIDSECRPRFRELVSEFS 276
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL Q +H N+V+L+G C + + +V E + G ++ + + + L + +
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGD 221
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT- 120
+ + YL S I HRD+ + N L+ +K KISDFG SR A + ++
Sbjct: 222 AAAGMEYLESKCCI---HRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVP 278
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
+ PE +++ +SDV+SFG++L E + G P + ++ R F++
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE----FVEKGGRL 334
Query: 180 RLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIR 230
E+ V R E+ C +RP+ + EL IR
Sbjct: 335 PCPELCPDAVFRLMEQ------------CWAYEPGQRPSFSTIYQELQSIR 373
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 65/252 (25%), Positives = 111/252 (44%), Gaps = 36/252 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + N +V G + E + GSL Q + + I +I +++
Sbjct: 76 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 131
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V L+YL I HRD+K +NIL++ + K+ DFG S + +D + GT
Sbjct: 132 VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTR 186
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRL 181
Y+ PE Q + ++ +SD++S G+ LVE+ G+ PI + S+A +
Sbjct: 187 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPI----GSGSGSMA-----------I 231
Query: 182 FEVLDAQVLREAEKEEVITVAM----VAKRCLNLNGKKRPTMKEVALELAGIRASIGASV 237
FE+LD V K ++ +CL N +R +K++ + A I+ S
Sbjct: 232 FELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPAERADLKQLMVH-AFIKRS----- 285
Query: 238 LRQCEEIDFVNY 249
EE+DF +
Sbjct: 286 --DAEEVDFAGW 295
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 44/275 (16%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + N +V G + E + GSL Q + + I +I +++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V L+YL I HRD+K +NIL++ + K+ DFG S + +D + GT
Sbjct: 113 VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTR 167
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE----------------- 164
Y+ PE Q + ++ +SD++S G+ LVE+ G+ PI + +E
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 165 ------NRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAM----VAKRCLNLNGK 214
R L++Y + +FE+LD V K ++ +CL N
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 215 KRPTMKEVALELAGIRASIGASVLRQCEEIDFVNY 249
+R +K++ + A I+ S EE+DF +
Sbjct: 288 ERADLKQLMVH-AFIKRS-------DAEEVDFAGW 314
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 44/275 (16%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + N +V G + E + GSL Q + + I +I +++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V L+YL I HRD+K +NIL++ + K+ DFG S + +D + GT
Sbjct: 113 VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTR 167
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE----------------- 164
Y+ PE Q + ++ +SD++S G+ LVE+ G+ PI + +E
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 165 ------NRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAM----VAKRCLNLNGK 214
R L++Y + +FE+LD V K ++ +CL N
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 215 KRPTMKEVALELAGIRASIGASVLRQCEEIDFVNY 249
+R +K++ + A I+ S EE+DF +
Sbjct: 288 ERADLKQLMVH-AFIKRS-------DAEEVDFAGW 314
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 69.3 bits (168), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 82/165 (49%), Gaps = 8/165 (4%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ + Q +H ++VKL+G E V ++ E G L ++ + + + + A
Sbjct: 443 LTMRQFDHPHIVKLIGVITENPV-WIIMELCTLGELRSFLQVR---KFSLDLASLILYAY 498
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++S AL+YL S + HRDI + N+L+ K+ DFG SR M + ++ K
Sbjct: 499 QLSTALAYLESKRFV---HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLP 555
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ PE +FT SDV+ FGV + E+L G KP + V+ +
Sbjct: 556 IKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNND 600
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 24/231 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL Q +H N+V+L+G C + + +V E + G ++ + + + L + +
Sbjct: 165 ILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLRTEGAR---LRVKTLLQMVGD 221
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT- 120
+ + YL S I HRD+ + N L+ +K KISDFG SR A + ++
Sbjct: 222 AAAGMEYLESKCCI---HRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVP 278
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAYFLQVINEN 179
+ PE +++ +SDV+SFG++L E + G P + ++ R F++
Sbjct: 279 VKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQTRE----FVEKGGRL 334
Query: 180 RLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIR 230
E+ V R E+ C +RP+ + EL IR
Sbjct: 335 PCPELCPDAVFRLMEQ------------CWAYEPGQRPSFSTIYQELQSIR 373
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ +T L + + + A +
Sbjct: 56 VMKKLRHEKLVQLYAVVSEEPI-XIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 113 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI 169
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 170 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 200
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 44/275 (16%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + N +V G + E + GSL Q + + I +I +++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V L+YL I HRD+K +NIL++ + K+ DFG S + +D + GT
Sbjct: 113 VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTR 167
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE----------------- 164
Y+ PE Q + ++ +SD++S G+ LVE+ G+ PI + +E
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 165 ------NRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAM----VAKRCLNLNGK 214
R L++Y + +FE+LD V K ++ +CL N
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 215 KRPTMKEVALELAGIRASIGASVLRQCEEIDFVNY 249
+R +K++ + A I+ S EE+DF +
Sbjct: 288 ERADLKQLMVH-AFIKRS-------DAEEVDFAGW 314
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 67/275 (24%), Positives = 116/275 (42%), Gaps = 44/275 (16%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + N +V G + E + GSL Q + + I +I +++
Sbjct: 57 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V L+YL I HRD+K +NIL++ + K+ DFG S + +D + GT
Sbjct: 113 VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTR 167
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE----------------- 164
Y+ PE Q + ++ +SD++S G+ LVE+ G+ PI + +E
Sbjct: 168 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKELELMFGCQVEGDAAETP 227
Query: 165 ------NRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAM----VAKRCLNLNGK 214
R L++Y + +FE+LD V K ++ +CL N
Sbjct: 228 PRPRTPGRPLSSYGMDSRPPMAIFELLDYIVNEPPPKLPSGVFSLEFQDFVNKCLIKNPA 287
Query: 215 KRPTMKEVALELAGIRASIGASVLRQCEEIDFVNY 249
+R +K++ + A I+ S EE+DF +
Sbjct: 288 ERADLKQLMVH-AFIKRS-------DAEEVDFAGW 314
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 68.9 bits (167), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 79/163 (48%), Gaps = 9/163 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + N +V G + E + GSL Q + + I +I +++
Sbjct: 84 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 139
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V L+YL I HRD+K +NIL++ + K+ DFG S + +D + GT
Sbjct: 140 VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDS--MANSFVGTR 194
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE 164
Y+ PE Q + ++ +SD++S G+ LVE+ G+ PI + +E
Sbjct: 195 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYPIPPPDAKE 237
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ +T L + + + A +
Sbjct: 59 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQ 115
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 116 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 172
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 173 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 203
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I++ N VV+L + +V E++P G L ++ + +P W R A E
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKW-ARFYTA-E 181
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V AL +HS I HRD+K N+LLD K++DFGT M + GT
Sbjct: 182 VVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 122 GYLDPEYFQS----SQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVIN 177
Y+ PE +S + + D +S GV L E+L G P SL + +++N
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA------DSLVGTYSKIMN 292
Query: 178 -ENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNL--NG----KKRPTMKEVALELAGIR 230
+N L D + +EA+ + A + R + L NG K+ K +R
Sbjct: 293 HKNSLTFPDDNDISKEAKN---LICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLR 349
Query: 231 ASIGASVLRQCEEIDFVNYDN 251
++ V +ID N+D+
Sbjct: 350 DTVAPVVPDLSSDIDTSNFDD 370
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 56/240 (23%), Positives = 107/240 (44%), Gaps = 40/240 (16%)
Query: 2 ILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH------------------- 41
+++Q+ +H N+V LLG C + L++E+ G L Y+
Sbjct: 101 MMTQLGSHENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRL 160
Query: 42 EQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFG 101
E+ ED +T+E L A +V+ + +L + + HRD+ + N+L+ KI DFG
Sbjct: 161 EEEEDLNVLTFEDLLCFAYQVAKGMEFLEFKSCV---HRDLAARNVLVTHGKVVKICDFG 217
Query: 102 TSRSMAVDRTHLT-TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRL 159
+R + D ++ + ++ PE +T KSDV+S+G++L E+ + G P
Sbjct: 218 LARDIMSDSNYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPG 277
Query: 160 VETEENRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTM 219
+ + N F ++I + Q E+ + ++ + C + +KRP+
Sbjct: 278 IPVDAN------FYKLIQNGFKMD----QPFYATEE-----IYIIMQSCWAFDSRKRPSF 322
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE----QTEDQLPI--------TWEI 54
+H N++ LLG C L E+ P+G+L ++ + +T+ I + +
Sbjct: 74 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 133
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
L A +V+ + YL I HRD+ + NIL+ + Y AKI+DFG SR V
Sbjct: 134 LLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQEV------ 184
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
VK T G ++ E S +T SDV+S+GV+L E+++ G P
Sbjct: 185 -YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 231
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 68.6 bits (166), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE----QTEDQLPI--------TWEI 54
+H N++ LLG C L E+ P+G+L ++ + +T+ I + +
Sbjct: 84 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 143
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
L A +V+ + YL I HRD+ + NIL+ + Y AKI+DFG SR V
Sbjct: 144 LLHFAADVARGMDYLSQKQFI---HRDLAARNILVGENYVAKIADFGLSRGQEV------ 194
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
VK T G ++ E S +T SDV+S+GV+L E+++ G P
Sbjct: 195 -YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 241
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I++ N VV+L + +V E++P G L ++ + +P W R A E
Sbjct: 122 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKW-ARFYTA-E 176
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V AL +HS I HRD+K N+LLD K++DFGT M + GT
Sbjct: 177 VVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 233
Query: 122 GYLDPEYFQS----SQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVIN 177
Y+ PE +S + + D +S GV L E+L G P SL + +++N
Sbjct: 234 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA------DSLVGTYSKIMN 287
Query: 178 -ENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNL--NG----KKRPTMKEVALELAGIR 230
+N L D + +EA+ + A + R + L NG K+ K +R
Sbjct: 288 HKNSLTFPDDNDISKEAKN---LICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLR 344
Query: 231 ASIGASVLRQCEEIDFVNYDN 251
++ V +ID N+D+
Sbjct: 345 DTVAPVVPDLSSDIDTSNFDD 365
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/261 (27%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I++ N VV+L + +V E++P G L ++ + +P W R A E
Sbjct: 127 IMAFANSPWVVQLFYAFQDDRYLYMVMEYMPGGDL---VNLMSNYDVPEKW-ARFYTA-E 181
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V AL +HS I HRD+K N+LLD K++DFGT M + GT
Sbjct: 182 VVLALDAIHSMGFI---HRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 122 GYLDPEYFQS----SQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVIN 177
Y+ PE +S + + D +S GV L E+L G P SL + +++N
Sbjct: 239 DYISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA------DSLVGTYSKIMN 292
Query: 178 -ENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNL--NG----KKRPTMKEVALELAGIR 230
+N L D + +EA+ + A + R + L NG K+ K +R
Sbjct: 293 HKNSLTFPDDNDISKEAKN---LICAFLTDREVRLGRNGVEEIKRHLFFKNDQWAWETLR 349
Query: 231 ASIGASVLRQCEEIDFVNYDN 251
++ V +ID N+D+
Sbjct: 350 DTVAPVVPDLSSDIDTSNFDD 370
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 47/160 (29%), Positives = 90/160 (56%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH-EQTEDQLPITWEIRLGIAV 60
+L + H N++ +G + + + V ++ SL++++H ++T+ Q+ +++ + IA
Sbjct: 85 VLRKTRHVNILLFMGYMTKDNLAI-VTQWCEGSSLYKHLHVQETKFQM---FQL-IDIAR 139
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMA-VDRTHLTTQVKG 119
+ + + YLH+ I HRD+KS NI L + KI DFG + + + Q G
Sbjct: 140 QTAQGMDYLHAKN---IIHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTG 196
Query: 120 TFGYLDPEYFQ---SSQFTEKSDVYSFGVVLVELLTGQKP 156
+ ++ PE + ++ F+ +SDVYS+G+VL EL+TG+ P
Sbjct: 197 SVLWMAPEVIRMQDNNPFSFQSDVYSYGIVLYELMTGELP 236
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 48/175 (27%), Positives = 83/175 (47%), Gaps = 30/175 (17%)
Query: 2 ILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTE--------------- 45
I+S + H N+V LLG C L++ E+ G L ++ + E
Sbjct: 87 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEG 146
Query: 46 ----DQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFG 101
D P+ L + +V+ +++L S I HRD+ + N+LL + + AKI DFG
Sbjct: 147 LDKEDGRPLELRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFG 203
Query: 102 TSRSMAVDRTHLTTQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+R + D ++ VKG ++ PE +T +SDV+S+G++L E+ +
Sbjct: 204 LARDIMNDSNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 255
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 68.2 bits (165), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 30/239 (12%)
Query: 26 LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSA 85
LV E++P+G L ++ + L + ++ + YL S + HRD+ +
Sbjct: 90 LVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRRCV---HRDLAAR 143
Query: 86 NILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT---FGYLDPEYFQSSQFTEKSDVYS 142
NIL++ + KI+DFG ++ + +D+ + + G F Y PE + F+ +SDV+S
Sbjct: 144 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFSRQSDVWS 202
Query: 143 FGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVIT-- 200
FGVVL EL T +++ S +A FL+++ R L + E + +
Sbjct: 203 FGVVLYELFT--------YCDKSCSPSAEFLRMMGSERDVPALSRLLELLEEGQRLPAPP 254
Query: 201 -----VAMVAKRCLNLNGKKRPTMKEVALELAGIRASIGASVLRQCEEIDFVNYDNARH 254
V + K C + + RP+ + +L + S R CE F + +H
Sbjct: 255 ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML-----WSGSRGCETHAFTAHPEGKH 308
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 109/252 (43%), Gaps = 40/252 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + N +V G + E + GSL Q + + I +I +++
Sbjct: 60 VLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVLKKAGR----IPEQILGKVSIA 115
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
V L+YL I HRD+K +NIL++ + K+ DFG S + +D + + GT
Sbjct: 116 VIKGLTYLREKHKI--MHRDVKPSNILVNSRGEIKLCDFGVSGQL-IDE--MANEFVGTR 170
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRL 181
Y+ PE Q + ++ +SD++S G+ LVE+ G+ P R A +
Sbjct: 171 SYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP---------RPPMA----------I 211
Query: 182 FEVLDAQVLREAEKEEVITVAM----VAKRCLNLNGKKRPTMKEVALELAGIRASIGASV 237
FE+LD V K ++ +CL N +R +K++ + A I+ S
Sbjct: 212 FELLDYIVNEPPPKLPSAVFSLEFQDFVNKCLIKNPAERADLKQLMVH-AFIKRS----- 265
Query: 238 LRQCEEIDFVNY 249
EE+DF +
Sbjct: 266 --DAEEVDFAGW 275
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.2 bits (165), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 80/157 (50%), Gaps = 11/157 (7%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI-HEQTEDQLPITWEIRLGIA 59
+I+ +H NVV + L + +V EF+ G+L + H + ++ T +
Sbjct: 94 VIMRDYHHDNVVDMYSSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIAT------VC 147
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+ V ALSYLH+ I HRDIKS +ILL R K+SDFG ++ + V G
Sbjct: 148 LSVLRALSYLHNQGVI---HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-G 203
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
T ++ PE + + D++S G++++E++ G+ P
Sbjct: 204 TPYWMAPEVISRLPYGTEVDIWSLGIMVIEMIDGEPP 240
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGIA 59
I S + H N++++ + + L+ EF P G L++ + H + ++Q T+
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF------M 120
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTS-RSMAVDRTHLTTQVK 118
E++ AL Y H I HRDIK N+L+ K KI+DFG S + ++ R +
Sbjct: 121 EELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---- 173
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + EK D++ GV+ E L G P
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 67.8 bits (164), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGIA 59
I S + H N++++ + + L+ EF P G L++ + H + ++Q T+
Sbjct: 68 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF------M 121
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTS-RSMAVDRTHLTTQVK 118
E++ AL Y H I HRDIK N+L+ K KI+DFG S + ++ R +
Sbjct: 122 EELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---- 174
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + EK D++ GV+ E L G P
Sbjct: 175 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 213
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/159 (30%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGIA 59
I S + H N++++ + + L+ EF P G L++ + H + ++Q T+
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRFDEQRSATF------M 120
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTS-RSMAVDRTHLTTQVK 118
E++ AL Y H I HRDIK N+L+ K KI+DFG S + ++ R +
Sbjct: 121 EELADALHYCHERKVI---HRDIKPENLLMGYKGELKIADFGWSVHAPSLRRRXMC---- 173
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + EK D++ GV+ E L G P
Sbjct: 174 GTLDYLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPPF 212
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 67.8 bits (164), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 71/156 (45%), Gaps = 4/156 (2%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L Q+NH NV+K +E +V E G L + I + + I V+
Sbjct: 85 LLKQLNHPNVIKYYASFIEDNELNIVLELADAGDLSRMIKHFKKQKRLIPERTVWKYFVQ 144
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ AL ++HS + HRDIK AN+ + K+ D G R + +T + GT
Sbjct: 145 LCSALEHMHSRR---VMHRDIKPANVFITATGVVKLGDLGLGRFFS-SKTTAAHSLVGTP 200
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
Y+ PE + + KSD++S G +L E+ Q P
Sbjct: 201 YYMSPERIHENGYNFKSDIWSLGCLLYEMAALQSPF 236
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 67.4 bits (163), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 82/171 (47%), Gaps = 12/171 (7%)
Query: 3 LSQINHRNVVKLLGCCLETEV-----PLLVYEFIPNGSLHQYIHEQTEDQLP--ITWEIR 55
+ +H NV++LLG C+E P+++ F+ G LH Y+ + P I +
Sbjct: 90 MKDFSHPNVIRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTL 149
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
L V+++ + YL + + HRD+ + N +L D ++DFG S+ + +
Sbjct: 150 LKFMVDIALGMEYLSNRNFL---HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQG 206
Query: 116 QV-KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ K ++ E +T KSDV++FGV + E+ T G P V+ E
Sbjct: 207 RIAKMPVKWIAIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHE 257
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ +I H +V+L E + +V E++ GSL ++ + L + + + A +
Sbjct: 66 VMKKIRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 123 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ +T L + + + A +
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQ 288
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 289 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT KSDV+SFG++L EL T G+ P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 59/239 (24%), Positives = 106/239 (44%), Gaps = 30/239 (12%)
Query: 26 LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSA 85
LV E++P+G L ++ + L + ++ + YL S + HRD+ +
Sbjct: 103 LVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRRCV---HRDLAAR 156
Query: 86 NILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT---FGYLDPEYFQSSQFTEKSDVYS 142
NIL++ + KI+DFG ++ + +D+ + + G F Y PE + F+ +SDV+S
Sbjct: 157 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFSRQSDVWS 215
Query: 143 FGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVIT-- 200
FGVVL EL T +++ S +A FL+++ R L + E + +
Sbjct: 216 FGVVLYELFT--------YCDKSCSPSAEFLRMMGCERDVPALSRLLELLEEGQRLPAPP 267
Query: 201 -----VAMVAKRCLNLNGKKRPTMKEVALELAGIRASIGASVLRQCEEIDFVNYDNARH 254
V + K C + + RP+ + +L + S R CE F + +H
Sbjct: 268 ACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML-----WSGSRGCETHAFTAHPEGKH 321
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR-LGIAV 60
IL ++N R VV L + LV + G L +I+ + P E R + A
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYAA 293
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
E+ L LH I +RD+K NILLDD +ISD G + + +T + +V GT
Sbjct: 294 EICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GT 348
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
GY+ PE ++ ++T D ++ G +L E++ GQ P +
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ +T L + + + A +
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQ 288
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 289 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT KSDV+SFG++L EL T G+ P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/253 (26%), Positives = 111/253 (43%), Gaps = 39/253 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLG 57
I+ Q + +VVK G + +V E+ GS+ I + TED++ + L
Sbjct: 77 IMQQCDSPHVVKYYGSYFKNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEIATILQSTLK 136
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
L YLH I HRDIK+ NILL+ + AK++DFG + + D V
Sbjct: 137 -------GLEYLHFMRKI---HRDIKAGNILLNTEGHAKLADFGVAGQL-TDXMAKRNXV 185
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVIN 177
GT ++ PE Q + +D++S G+ +E+ G+ P + + A F+ N
Sbjct: 186 IGTPFWMAPEVIQEIGYNCVADIWSLGITAIEMAEGKPPYADI-----HPMRAIFMIPTN 240
Query: 178 ENRLFEVLDAQVLREAEKEEVITVAMV--AKRCLNLNGKKRPTMKEVALELAGIRASIGA 235
F K E+ + K+CL + ++R T ++ L+ +R++ G
Sbjct: 241 PPPTF-----------RKPELWSDNFTDFVKQCLVKSPEQRATATQL-LQHPFVRSAKGV 288
Query: 236 SVLRQCEEIDFVN 248
S+LR D +N
Sbjct: 289 SILR-----DLIN 296
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 76/151 (50%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ + H +VKL + + ++ EF+ GSL ++ + P+ + + +
Sbjct: 63 VMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQ 119
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++++ I HRD+++ANIL+ KI+DFG +R + + K
Sbjct: 120 IAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPI 176
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE FT KSDV+SFG++L+E++T
Sbjct: 177 KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 207
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 77/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCT---RFYTA-E 140
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 197
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE ++ SD+++ G ++ +L+ G P R
Sbjct: 198 AQYVSPELLTEKSASKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ +T L + + ++ +
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLP--QLVDMSAQ 119
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 120 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPI 176
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 78/158 (49%), Gaps = 9/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR-LGIAV 60
IL ++N R VV L + LV + G L +I+ + P E R + A
Sbjct: 237 ILEKVNSRFVVSLAYAYETKDALCLVLTLMNGGDLKFHIYHMGQAGFP---EARAVFYAA 293
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
E+ L LH I +RD+K NILLDD +ISD G + + +T + +V GT
Sbjct: 294 EICCGLEDLHRER---IVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GT 348
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
GY+ PE ++ ++T D ++ G +L E++ GQ P +
Sbjct: 349 VGYMAPEVVKNERYTFSPDWWALGCLLYEMIAGQSPFQ 386
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ + L + + + A +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 123 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPI 179
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 80/160 (50%), Gaps = 16/160 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGI 58
I+ +NH N+VKL +ETE L LV E+ G + Y+ H + +++ E R
Sbjct: 67 IMKILNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAKF 120
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
VS A+ Y H I HRD+K+ N+LLD KI+DFG S V T
Sbjct: 121 RQIVS-AVQYCHQKY---IVHRDLKAENLLLDGDMNIKIADFGFSNEFTVGNKLDT--FC 174
Query: 119 GTFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
G+ Y PE FQ ++ + DV+S GV+L L++G P
Sbjct: 175 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 214
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 82/156 (52%), Gaps = 7/156 (4%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ +T L + + + A +
Sbjct: 232 VMKKLRHEKLVQLYAVVSEEPI-YIVGEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQ 288
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 289 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 345
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT KSDV+SFG++L EL T G+ P
Sbjct: 346 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 381
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 28/168 (16%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE----QTEDQLPI--------TWEI 54
+H N++ LLG C L E+ P+G+L ++ + +T+ I + +
Sbjct: 81 HHPNIINLLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQ 140
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
L A +V+ + YL I HR++ + NIL+ + Y AKI+DFG SR V
Sbjct: 141 LLHFAADVARGMDYLSQKQFI---HRNLAARNILVGENYVAKIADFGLSRGQEV------ 191
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
VK T G ++ E S +T SDV+S+GV+L E+++ G P
Sbjct: 192 -YVKKTMGRLPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTP 238
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 66.6 bits (161), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 41/151 (27%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ +T L + + + A +
Sbjct: 315 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGETGKYLRLPQLVDM--AAQ 371
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 372 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 428
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 429 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 459
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 79/151 (52%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ +T L + + + + +
Sbjct: 63 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMNKGSLLDFLKGETGKYLRLPQLVDM--SAQ 119
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 120 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 176
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 177 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 207
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+I+ H NVV++ L + +V EF+ G+L + ++ I + +
Sbjct: 69 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCL 123
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
V ALS LH+ I HRDIKS +ILL R K+SDFG ++ + V GT
Sbjct: 124 AVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GT 179
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE + + D++S G++++E++ G+ P
Sbjct: 180 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 215
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+I+ H NVV++ L + +V EF+ G+L + ++ I + +
Sbjct: 78 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCL 132
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
V ALS LH+ I HRDIKS +ILL R K+SDFG ++ + V GT
Sbjct: 133 AVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GT 188
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE + + D++S G++++E++ G+ P
Sbjct: 189 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 224
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 67 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 123 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 179
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 180 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 217
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 137
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 194
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 232
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+I+ H NVV++ L + +V EF+ G+L + ++ I + +
Sbjct: 73 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCL 127
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
V ALS LH+ I HRDIKS +ILL R K+SDFG ++ + V GT
Sbjct: 128 AVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GT 183
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE + + D++S G++++E++ G+ P
Sbjct: 184 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 219
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 60 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 115
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 116 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 172
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 173 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 210
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/156 (26%), Positives = 81/156 (51%), Gaps = 7/156 (4%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ + L + + + A +
Sbjct: 55 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 112 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 168
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE +FT KSDV+SFG++L EL T G+ P
Sbjct: 169 KWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP 204
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 21/166 (12%)
Query: 2 ILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-----QTEDQLPI---TW 52
I+S + H N+V LLG C L++ E+ G L ++ +T+ I T
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTL 161
Query: 53 EIR--LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR 110
R L + +V+ +++L S I HRD+ + N+LL + + AKI DFG +R + D
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 111 THLTTQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
++ VKG ++ PE +T +SDV+S+G++L E+ +
Sbjct: 219 NYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 138
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV-KGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGT 195
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 61 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 116
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 117 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 173
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 174 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 211
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ + L + + + A +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 123 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 62 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 117
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 118 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 174
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 175 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 212
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 141
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGT 198
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 236
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
A E+ L +LHS I +RD+K NILLD KI+DFG + + T +
Sbjct: 125 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFC 180
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE 164
GT Y+ PE ++ D +SFGV+L E+L GQ P + EE
Sbjct: 181 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 226
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+I+ H NVV++ L + +V EF+ G+L + ++ I + +
Sbjct: 80 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCL 134
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
V ALS LH+ I HRDIKS +ILL R K+SDFG ++ + V GT
Sbjct: 135 AVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GT 190
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE + + D++S G++++E++ G+ P
Sbjct: 191 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 226
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 82 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 137
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 138 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 194
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 195 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 232
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/168 (27%), Positives = 82/168 (48%), Gaps = 23/168 (13%)
Query: 2 ILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR----- 55
I+S + H N+V LLG C L++ E+ G L ++ + L ++
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEE 161
Query: 56 -------LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV 108
L + +V+ +++L S I HRD+ + N+LL + + AKI DFG +R +
Sbjct: 162 QLSSRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMN 218
Query: 109 DRTHLTTQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
D ++ VKG ++ PE +T +SDV+S+G++L E+ +
Sbjct: 219 DSNYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 263
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 138
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 63 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 118
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 119 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 175
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 176 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 213
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 140
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 140
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 198 AQYVSPELLTEKSAXKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 140
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 75/158 (47%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 138
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHL-TTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 26/168 (15%)
Query: 2 ILSQI-NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
IL Q+ H +++ L+ + LV++ + G L Y+ E+ + ++ + I
Sbjct: 152 ILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEK----VALSEKETRSIMR 207
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK-- 118
+ A+S+LH+ I HRD+K NILLDD + ++SDFG S HL K
Sbjct: 208 SLLEAVSFLHANN---IVHRDLKPENILLDDNMQIRLSDFGFS-------CHLEPGEKLR 257
Query: 119 ---GTFGYLDPEYFQSSQ------FTEKSDVYSFGVVLVELLTGQKPI 157
GT GYL PE + S + ++ D+++ GV+L LL G P
Sbjct: 258 ELCGTPGYLAPEILKCSMDETHPGYGKEVDLWACGVILFTLLAGSPPF 305
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 83 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 138
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 139 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 195
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 196 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 233
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 140
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ + L + + + A +
Sbjct: 57 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 114 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 170
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 171 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 201
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 21/166 (12%)
Query: 2 ILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-----QTEDQLPI---TW 52
I+S + H N+V LLG C L++ E+ G L ++ +T+ I T
Sbjct: 102 IMSHLGQHENIVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTA 161
Query: 53 EIR--LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR 110
R L + +V+ +++L S I HRD+ + N+LL + + AKI DFG +R + D
Sbjct: 162 STRDLLHFSSQVAQGMAFLASKNCI---HRDVAARNVLLTNGHVAKIGDFGLARDIMNDS 218
Query: 111 THLTTQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
++ VKG ++ PE +T +SDV+S+G++L E+ +
Sbjct: 219 NYI---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFS 261
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 86 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 141
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 142 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 198
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 199 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 236
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ + L + + + A +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 123 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 106/240 (44%), Gaps = 32/240 (13%)
Query: 26 LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSA 85
LV E++P+G L ++ + L + ++ + YL S + HRD+ +
Sbjct: 91 LVMEYLPSGCLRDFLQRHRAR---LDASRLLLYSSQICKGMEYLGSRRCV---HRDLAAR 144
Query: 86 NILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT---FGYLDPEYFQSSQFTEKSDVYS 142
NIL++ + KI+DFG ++ + +D+ + + G F Y PE + F+ +SDV+S
Sbjct: 145 NILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYA-PESLSDNIFSRQSDVWS 203
Query: 143 FGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVL--------DAQVLREAE 194
FGVVL EL T +++ S +A FL+++ R L + Q L A
Sbjct: 204 FGVVLYELFT--------YCDKSCSPSAEFLRMMGCERDVPALCRLLELLEEGQRL-PAP 254
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRASIGASVLRQCEEIDFVNYDNARH 254
V + K C + + RP+ + +L + S R CE F + +H
Sbjct: 255 PACPAEVHELMKLCWAPSPQDRPSFSALGPQLDML-----WSGSRGCETHAFTAHPEGKH 309
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 85 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 140
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 141 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 197
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 198 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 235
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 78/151 (51%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ + L + + + A +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 123 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 76/158 (48%), Gaps = 8/158 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H VKL + E + NG L +YI + T R A E
Sbjct: 88 VMSRLDHPFFVKLYFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCT---RFYTA-E 143
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ AL YLH I HRD+K NILL++ +I+DFGT++ ++ + + GT
Sbjct: 144 IVSALEYLHGKG---IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGT 200
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
Y+ PE + SD+++ G ++ +L+ G P R
Sbjct: 201 AQYVSPELLTEKSACKSSDLWALGCIIYQLVAGLPPFR 238
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 66.2 bits (160), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 40/235 (17%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL--------------PITW 52
NH N+V LLG C L++ E+ G L ++ + + + +
Sbjct: 85 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 144
Query: 53 EIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH 112
E L + +V+ +++L S I HRD+ + NILL KI DFG +R + D +
Sbjct: 145 EDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNY 201
Query: 113 LTTQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRS 167
+ VKG ++ PE + +T +SDV+S+G+ L EL + G P + +
Sbjct: 202 V---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-- 256
Query: 168 LAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
F ++I E F +L + AE +++ K C + + KRPT K++
Sbjct: 257 ----FYKMIKEG--FRMLSPE-HAPAEMYDIM------KTCWDADPLKRPTFKQI 298
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 65.9 bits (159), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/156 (28%), Positives = 77/156 (49%), Gaps = 9/156 (5%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+I+ H NVV++ L + +V EF+ G+L + ++ I + +
Sbjct: 123 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQIA-----AVCL 177
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
V ALS LH+ I HRDIKS +ILL R K+SDFG ++ + V GT
Sbjct: 178 AVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GT 233
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE + + D++S G++++E++ G+ P
Sbjct: 234 PYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 269
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 40/235 (17%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL--------------PITW 52
NH N+V LLG C L++ E+ G L ++ + + + +
Sbjct: 103 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 162
Query: 53 EIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH 112
E L + +V+ +++L S I HRD+ + NILL KI DFG +R + D +
Sbjct: 163 EDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNY 219
Query: 113 LTTQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRS 167
+ VKG ++ PE + +T +SDV+S+G+ L EL + G P + +
Sbjct: 220 V---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-- 274
Query: 168 LAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
F ++I E F +L + AE +++ K C + + KRPT K++
Sbjct: 275 ----FYKMIKEG--FRMLSPE-HAPAEMYDIM------KTCWDADPLKRPTFKQI 316
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 63/122 (51%), Gaps = 9/122 (7%)
Query: 47 QLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM 106
Q PI I + V + AL YL + HRD+K +NILLD++ + K+ DFG S +
Sbjct: 118 QGPIPERILGKMTVAIVKALYYLKEKHGV--IHRDVKPSNILLDERGQIKLCDFGISGRL 175
Query: 107 AVDRTHLTTQVKGTFGYLDPEYFQSSQFTE-----KSDVYSFGVVLVELLTGQKPIRLVE 161
D+ + G Y+ PE T+ ++DV+S G+ LVEL TGQ P + +
Sbjct: 176 VDDKAK--DRSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFPYKNCK 233
Query: 162 TE 163
T+
Sbjct: 234 TD 235
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S++NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 86 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 146 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 198
Query: 115 TQVKG-----TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 40/235 (17%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL--------------PITW 52
NH N+V LLG C L++ E+ G L ++ + + + +
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 53 EIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH 112
E L + +V+ +++L S I HRD+ + NILL KI DFG +R + D +
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNY 224
Query: 113 LTTQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRS 167
+ VKG ++ PE + +T +SDV+S+G+ L EL + G P + +
Sbjct: 225 V---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-- 279
Query: 168 LAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
F ++I E F +L + AE +++ K C + + KRPT K++
Sbjct: 280 ----FYKMIKEG--FRMLSPE-HAPAEMYDIM------KTCWDADPLKRPTFKQI 321
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 40/235 (17%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL--------------PITW 52
NH N+V LLG C L++ E+ G L ++ + + + +
Sbjct: 101 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 160
Query: 53 EIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH 112
E L + +V+ +++L S I HRD+ + NILL KI DFG +R + D +
Sbjct: 161 EDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARDIKNDSNY 217
Query: 113 LTTQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRS 167
+ VKG ++ PE + +T +SDV+S+G+ L EL + G P + +
Sbjct: 218 V---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-- 272
Query: 168 LAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
F ++I E F +L + AE +++ K C + + KRPT K++
Sbjct: 273 ----FYKMIKEG--FRMLSPE-HAPAEMYDIM------KTCWDADPLKRPTFKQI 314
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 80/163 (49%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S++NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 100 LIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 160 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 212
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 13/158 (8%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH--EQTEDQLPITWEIRLGI 58
+I+ H NVV++ L + +V EF+ G+L + E+Q+ +
Sbjct: 200 VIMRDYQHENVVEMYNSYLVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-------AAV 252
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
+ V ALS LH+ I HRDIKS +ILL R K+SDFG ++ + V
Sbjct: 253 CLAVLQALSVLHAQGVI---HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV- 308
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE + + D++S G++++E++ G+ P
Sbjct: 309 GTPYWMAPELISRLPYGPEVDIWSLGIMVIEMVDGEPP 346
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 74/156 (47%), Gaps = 16/156 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQT-----EDQLPITWEIRL 56
+L+ + H N+V+ E +V ++ G L + I+ Q EDQ+ + W
Sbjct: 76 VLANMKHPNIVQYRESFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQI-LDW---- 130
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
V++ AL ++H I HRDIKS NI L ++ DFG +R + L
Sbjct: 131 --FVQICLALKHVHDRK---ILHRDIKSQNIFLTKDGTVQLGDFGIARVLN-STVELARA 184
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
GT YL PE ++ + KSD+++ G VL EL T
Sbjct: 185 CIGTPYYLSPEICENKPYNNKSDIWALGCVLYELCT 220
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
IL++++ R +V L ET+ L LV + G + +I+ ED +
Sbjct: 238 ILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ L +LH I +RD+K N+LLDD +ISD G + + +T T GT
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGT 352
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRL-VETEENRSL 168
G++ PE ++ D ++ GV L E++ + P R E EN+ L
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 53/106 (50%), Gaps = 4/106 (3%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
A E+ L +LHS I +RD+K NILLD KI+DFG + + T
Sbjct: 124 AAEIILGLQFLHSKG---IVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFC 179
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE 164
GT Y+ PE ++ D +SFGV+L E+L GQ P + EE
Sbjct: 180 GTPDYIAPEILLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEE 225
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 5 QINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLGIAV 60
+ H+N+V+ LG E + E +P GSL + + +++ I + +
Sbjct: 75 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK----- 129
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA--KISDFGTSRSMAVDRTHLTTQVK 118
++ L YLH I HRDIK N+L+ + Y KISDFGTS+ +A T
Sbjct: 130 QILEGLKYLHDNQ---IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLA-GINPCTETFT 184
Query: 119 GTFGYLDPEYFQSSQ--FTEKSDVYSFGVVLVELLTGQKPI 157
GT Y+ PE + + +D++S G ++E+ TG+ P
Sbjct: 185 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 225
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
IL++++ R +V L ET+ L LV + G + +I+ ED +
Sbjct: 238 ILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ L +LH I +RD+K N+LLDD +ISD G + + +T T GT
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGT 352
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRL-VETEENRSL 168
G++ PE ++ D ++ GV L E++ + P R E EN+ L
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 65.5 bits (158), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 145 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 197
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 47/161 (29%), Positives = 77/161 (47%), Gaps = 18/161 (11%)
Query: 5 QINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLGIAV 60
+ H+N+V+ LG E + E +P GSL + + +++ I + +
Sbjct: 61 HLKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKDNEQTIGFYTK----- 115
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA--KISDFGTSRSMAVDRTHLTTQVK 118
++ L YLH I HRDIK N+L+ + Y KISDFGTS+ +A T
Sbjct: 116 QILEGLKYLHDNQ---IVHRDIKGDNVLI-NTYSGVLKISDFGTSKRLA-GINPCTETFT 170
Query: 119 GTFGYLDPEYFQSSQ--FTEKSDVYSFGVVLVELLTGQKPI 157
GT Y+ PE + + +D++S G ++E+ TG+ P
Sbjct: 171 GTLQYMAPEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPF 211
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
IL++++ R +V L ET+ L LV + G + +I+ ED +
Sbjct: 238 ILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ L +LH I +RD+K N+LLDD +ISD G + + +T T GT
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGT 352
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRL-VETEENRSL 168
G++ PE ++ D ++ GV L E++ + P R E EN+ L
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 78/152 (51%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
++ + H +VKL T+ P+ ++ EF+ GSL ++ + P+ + +
Sbjct: 236 VMKTLQHDKLVKLHAVV--TKEPIYIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSA 291
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+++ ++++ I HRD+++ANIL+ KI+DFG +R + + K
Sbjct: 292 QIAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFP 348
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE FT KSDV+SFG++L+E++T
Sbjct: 349 IKWTAPEAINFGSFTIKSDVWSFGILLMEIVT 380
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 85 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 144
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 145 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 197
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 198 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 240
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 106/235 (45%), Gaps = 40/235 (17%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL--------------PITW 52
NH N+V LLG C L++ E+ G L ++ + + + +
Sbjct: 108 NHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDL 167
Query: 53 EIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH 112
E L + +V+ +++L S I HRD+ + NILL KI DFG +R + D +
Sbjct: 168 EDLLSFSYQVAKGMAFLASKNCI---HRDLAARNILLTHGRITKICDFGLARHIKNDSNY 224
Query: 113 LTTQVKGT----FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRS 167
+ VKG ++ PE + +T +SDV+S+G+ L EL + G P + +
Sbjct: 225 V---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMPVDSK-- 279
Query: 168 LAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
F ++I E F +L + AE +++ K C + + KRPT K++
Sbjct: 280 ----FYKMIKEG--FRMLSPE-HAPAEMYDIM------KTCWDADPLKRPTFKQI 321
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/169 (28%), Positives = 79/169 (46%), Gaps = 7/169 (4%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
IL++++ R +V L ET+ L LV + G + +I+ ED +
Sbjct: 238 ILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDNPGFQEPRAIFYTA 296
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ L +LH I +RD+K N+LLDD +ISD G + + +T T GT
Sbjct: 297 QIVSGLEHLHQRN---IIYRDLKPENVLLDDDGNVRISDLGLAVELKAGQTK-TKGYAGT 352
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRL-VETEENRSL 168
G++ PE ++ D ++ GV L E++ + P R E EN+ L
Sbjct: 353 PGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPFRARGEKVENKEL 401
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 77 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 136
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 137 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 189
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 190 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 232
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGI 58
I+ +NH N+VKL +ETE L LV E+ G + Y+ H + +++ E R
Sbjct: 66 IMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAKF 119
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
VS A+ Y H I HRD+K+ N+LLD KI+DFG S +
Sbjct: 120 RQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDEFC 173
Query: 119 GTFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
G+ Y PE FQ ++ + DV+S GV+L L++G P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 160 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 212
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 102 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 161
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 162 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 214
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 215 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 257
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 56/159 (35%), Positives = 81/159 (50%), Gaps = 16/159 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGI 58
I+ +NH N+VKL +ETE L L+ E+ G + Y+ H + +++ E R
Sbjct: 64 IMKILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-----EARSKF 117
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
VS A+ Y H I HRD+K+ N+LLD KI+DFG S V L T
Sbjct: 118 RQIVS-AVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVG-GKLDTFC- 171
Query: 119 GTFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKP 156
G+ Y PE FQ ++ + DV+S GV+L L++G P
Sbjct: 172 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 210
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 112 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 171
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 172 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 224
Query: 115 TQVKG-----TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 225 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 267
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ + L + + + A +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+ +ANIL+ + K++DFG +R + + K
Sbjct: 123 IASGMAYVERMNYV---HRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 65.1 bits (157), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 92 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 151
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 152 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 204
Query: 115 TQVKG-----TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 205 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 247
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 146 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 198
Query: 115 TQVKG-----TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 80/156 (51%), Gaps = 6/156 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ + H +V+L E ++ E++ GSL ++ ++++ + + + +
Sbjct: 61 LMKTLQHDKLVRLYAVVTREEPIYIITEYMAKGSLLDFL--KSDEGGKVLLPKLIDFSAQ 118
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ I HRD+++AN+L+ + KI+DFG +R + + K
Sbjct: 119 IAEGMAYIERKNYI---HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 175
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE FT KSDV+SFG++L E++T G+ P
Sbjct: 176 KWTAPEAINFGCFTIKSDVWSFGILLYEIVTYGKIP 211
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 81/156 (51%), Gaps = 6/156 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ + H +V+L + E ++ EF+ GSL ++ ++++ + + + +
Sbjct: 60 LMKTLQHDKLVRLYAVVTKEEPIYIITEFMAKGSLLDFL--KSDEGGKVLLPKLIDFSAQ 117
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ I HRD+++AN+L+ + KI+DFG +R + + K
Sbjct: 118 IAEGMAYIERKNYI---HRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPI 174
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKP 156
+ PE FT KS+V+SFG++L E++T G+ P
Sbjct: 175 KWTAPEAINFGCFTIKSNVWSFGILLYEIVTYGKIP 210
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 86 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 145
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 146 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MAQDIYRAS 198
Query: 115 TQVKG-----TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 199 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 241
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 87/181 (48%), Gaps = 8/181 (4%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL--GIA 59
++ ++ H N+V+L LV+EF+ N L +Y+ +T P E+ L
Sbjct: 56 LMKELKHENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQ 114
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
++ L++ H I HRD+K N+L++ + + K+ DFG +R+ + +++V
Sbjct: 115 WQLLQGLAFCHENK---ILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV- 170
Query: 120 TFGYLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINE 178
T Y P+ S+ ++ D++S G +L E++TG+ EE L + NE
Sbjct: 171 TLWYRAPDVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKLIFDIMGTPNE 230
Query: 179 N 179
+
Sbjct: 231 S 231
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ G L ++ + L + + + A +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDM--AAQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 123 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 64.7 bits (156), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGI 58
I+ +NH N+VKL +ETE L LV E+ G + Y+ H + +++ E R
Sbjct: 66 IMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAKF 119
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
VS A+ Y H I HRD+K+ N+LLD KI+DFG S T
Sbjct: 120 RQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FC 173
Query: 119 GTFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
G+ Y PE FQ ++ + DV+S GV+L L++G P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGI 58
I+ +NH N+VKL +ETE L LV E+ G + Y+ H + +++ E R
Sbjct: 66 IMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAKF 119
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
VS A+ Y H I HRD+K+ N+LLD KI+DFG S T
Sbjct: 120 RQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FC 173
Query: 119 GTFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
G+ Y PE FQ ++ + DV+S GV+L L++G P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 79/163 (48%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 100 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 159
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D +
Sbjct: 160 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAS 212
Query: 115 TQVKG-----TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 213 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 255
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 55/160 (34%), Positives = 79/160 (49%), Gaps = 16/160 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGI 58
I+ +NH N+VKL +ETE L LV E+ G + Y+ H + +++ E R
Sbjct: 66 IMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAKF 119
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
VS A+ Y H I HRD+K+ N+LLD KI+DFG S T
Sbjct: 120 RQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FC 173
Query: 119 GTFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
G+ Y PE FQ ++ + DV+S GV+L L++G P
Sbjct: 174 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 64.7 bits (156), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/163 (33%), Positives = 76/163 (46%), Gaps = 21/163 (12%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSL-HQYIHEQTEDQLPITWEIRLGIAV 60
+L ++H N++KL + + LV EF G L Q I+ D+ I
Sbjct: 99 LLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFDECDAA-----NIMK 153
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDK---YRAKISDFGTSRSMAVD---RTHLT 114
++ + YLH I HRDIK NILL++K KI DFG S + D R L
Sbjct: 154 QILSGICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYKLRDRL- 209
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT Y+ PE + ++ EK DV+S GV++ LL G P
Sbjct: 210 ----GTAYYIAPEVLKK-KYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ GSL ++ + L + + + A +
Sbjct: 233 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDM--AAQ 289
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG R + + K
Sbjct: 290 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPI 346
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 347 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 377
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 77/151 (50%), Gaps = 6/151 (3%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ ++ H +V+L E + +V E++ G L ++ + L + + + A +
Sbjct: 66 VMKKLRHEKLVQLYAVVSEEPI-YIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDM--AAQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++Y+ + HRD+++ANIL+ + K++DFG +R + + K
Sbjct: 123 IASGMAYVERMNYV---HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPI 179
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE +FT KSDV+SFG++L EL T
Sbjct: 180 KWTAPEAALYGRFTIKSDVWSFGILLTELTT 210
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 64.3 bits (155), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/159 (33%), Positives = 78/159 (49%), Gaps = 16/159 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGI 58
I+ +NH N+VKL +ETE L L+ E+ G + Y+ H + +++ E R
Sbjct: 67 IMKILNHPNIVKLFEV-IETEKTLYLIMEYASGGEVFDYLVAHGRMKEK-----EARSKF 120
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
VS A+ Y H I HRD+K+ N+LLD KI+DFG S V
Sbjct: 121 RQIVS-AVQYCHQKR---IVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGK--LDAFC 174
Query: 119 GTFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKP 156
G Y PE FQ ++ + DV+S GV+L L++G P
Sbjct: 175 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 93/197 (47%), Gaps = 28/197 (14%)
Query: 4 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH-EQTEDQLPITWEIRLGIAVEV 62
+ + RN VK + + + E+ NG+L+ IH E Q W + ++
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRL----FRQI 125
Query: 63 SGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRS-------MAVDRTHLT- 114
ALSY+HS I HRD+K NI +D+ KI DFG +++ + +D +L
Sbjct: 126 LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 115 -----TQVKGTFGYLDPEYFQ-SSQFTEKSDVYSFGVVLVELL----TGQKPIRLVETEE 164
T GT Y+ E + + EK D+YS G++ E++ TG + + ++ ++
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL--KK 240
Query: 165 NRSLAAYFLQVINENRL 181
RS++ F ++N++
Sbjct: 241 LRSVSIEFPPDFDDNKM 257
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 103 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 162
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D
Sbjct: 163 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAG 215
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 216 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 258
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/157 (28%), Positives = 77/157 (49%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+L+ ++ + L C +T L V E++ G L +I + + + P + A
Sbjct: 72 VLALLDKPPFLTQLHSCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQA----VFYAA 127
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
E+S L +LH I +RD+K N++LD + KI+DFG + +D T + GT
Sbjct: 128 EISIGLFFLHKRG---IIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGV-TTREFCGT 183
Query: 121 FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
Y+ PE + + D +++GV+L E+L GQ P
Sbjct: 184 PDYIAPEIIAYQPYGKSVDWWAYGVLLYEMLAGQPPF 220
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 64.3 bits (155), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 51/184 (27%), Positives = 88/184 (47%), Gaps = 20/184 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVP--LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
IL ++ +VK G P LV E++P+G L ++ + L +
Sbjct: 61 ILKALHSDFIVKYRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRAR---LDASRLLLYS 117
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
++ + YL S + HRD+ + NIL++ + KI+DFG ++ + +D+ + G
Sbjct: 118 SQICKGMEYLGSRRCV---HRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPG 174
Query: 120 T---FGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVI 176
F Y PE + F+ +SDV+SFGVVL EL T +++ S +A FL+++
Sbjct: 175 QSPIFWYA-PESLSDNIFSRQSDVWSFGVVLYELFT--------YCDKSCSPSAEFLRMM 225
Query: 177 NENR 180
R
Sbjct: 226 GCER 229
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 16/160 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGI 58
I+ +NH N+VKL +ETE L LV E+ G + Y+ H +++ E R
Sbjct: 59 IMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGWMKEK-----EARAKF 112
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
++ A+ Y H I HRD+K+ N+LLD KI+DFG S T
Sbjct: 113 R-QIVSAVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FC 166
Query: 119 GTFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
G+ Y PE FQ ++ + DV+S GV+L L++G P
Sbjct: 167 GSPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 206
>pdb|4EUT|A Chain A, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
pdb|4EUT|B Chain B, Structure Of Bx-795 Complexed With Unphosphorylated Human
Tbk1 Kinase- Uld Domain
Length = 396
Score = 63.9 bits (154), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 84/174 (48%), Gaps = 20/174 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEV--PLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
+L ++NH+N+VKL ET +L+ EF P GSL+ + E+ + + L +
Sbjct: 60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSNAYGLPESEFLIVL 118
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILL----DDKYRAKISDFGTSRSMAVDRTHLTT 115
+V G +++L I HR+IK NI+ D + K++DFG +R + D ++
Sbjct: 119 RDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVS- 174
Query: 116 QVKGTFGYLDPEYFQSS--------QFTEKSDVYSFGVVLVELLTGQKPIRLVE 161
+ GT YL P+ ++ + ++ D++S GV TG P R E
Sbjct: 175 -LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 78/163 (47%), Gaps = 18/163 (11%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHE-QTEDQLPITWEI--RLG 57
+I+S+ NH+N+V+ +G L++ ++ E + G L ++ E + P + + L
Sbjct: 126 LIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDLLH 185
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLT 114
+A +++ YL I HRDI + N LL AKI DFG MA D
Sbjct: 186 VARDIACGCQYLEENHFI---HRDIAARNCLLTCPGPGRVAKIGDFG----MARDIYRAG 238
Query: 115 TQVKGTFG-----YLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
KG ++ PE F FT K+D +SFGV+L E+ +
Sbjct: 239 YYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFS 281
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/142 (30%), Positives = 75/142 (52%), Gaps = 15/142 (10%)
Query: 26 LVYEFIPNGSLHQY------IHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYH 79
++YE++ N S+ ++ + + +PI ++ I V + SY+H+ +I H
Sbjct: 120 IIYEYMENDSILKFDEYFFVLDKNYTCFIPI--QVIKCIIKSVLNSFSYIHNEKNIC--H 175
Query: 80 RDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYF--QSSQFTEK 137
RD+K +NIL+D R K+SDFG S M VD+ +GT+ ++ PE+F +SS K
Sbjct: 176 RDVKPSNILMDKNGRVKLSDFGESEYM-VDKK--IKGSRGTYEFMPPEFFSNESSYNGAK 232
Query: 138 SDVYSFGVVLVELLTGQKPIRL 159
D++S G+ L + P L
Sbjct: 233 VDIWSLGICLYVMFYNVVPFSL 254
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 103/249 (41%), Gaps = 37/249 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLL-VYEFIPNGSLHQYIHEQTEDQLPITWEIRLGI-A 59
ILS + + L CC +T L V EF+ G L +I + E R A
Sbjct: 76 ILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD-----EARARFYA 130
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
E+ AL +LH I +RD+K N+LLD + K++DFG + + T G
Sbjct: 131 AEIISALMFLHDKG---IIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNGV-TTATFCG 186
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINEN 179
T Y+ PE Q + D ++ GV+L E+L G P + NE+
Sbjct: 187 TPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAP----------------FEAENED 230
Query: 180 RLFE-VLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGIRASIGASVL 238
LFE +L+ +V+ E T + + K PTM+ +L G A +
Sbjct: 231 DLFEAILNDEVVYPTWLHEDATGILKSFM------TKNPTMRLGSLTQGGEHAILRHPFF 284
Query: 239 RQCEEIDFV 247
+ EID+
Sbjct: 285 K---EIDWA 290
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 83/170 (48%), Gaps = 17/170 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
+L I + L +TE L L+ ++I G L ++ ++ TE ++ +I +G
Sbjct: 111 VLEHIRQSPFLVTLHYAFQTETKLHLILDYINGGELFTHLSQRERFTEHEV----QIYVG 166
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
E+ AL +LH + I +RDIK NILLD ++DFG S+ D T
Sbjct: 167 ---EIVLALEHLHK---LGIIYRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDF 220
Query: 118 KGTFGYLDPEYFQS--SQFTEKSDVYSFGVVLVELLTGQKPIRLVETEEN 165
GT Y+ P+ + S + D +S GV++ ELLTG P V+ E+N
Sbjct: 221 CGTIEYMAPDIVRGGDSGHDKAVDWWSLGVLMYELLTGASPFT-VDGEKN 269
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGI 58
I+ +NH N+VKL +ETE L LV E+ G + Y+ H + +++ E R
Sbjct: 66 IMKVLNHPNIVKLFEV-IETEKTLYLVMEYASGGEVFDYLVAHGRMKEK-----EARAKF 119
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
VS A+ Y H I HRD+K+ N+LLD KI+DFG S
Sbjct: 120 RQIVS-AVQYCHQKF---IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNK--LDAFC 173
Query: 119 GTFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
G Y PE FQ ++ + DV+S GV+L L++G P
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI-----HE---QTEDQLPITW 52
++ +++ H NVV LLG + + +++ + +G LH+++ H T+D +
Sbjct: 64 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 123
Query: 53 EIR----LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-A 107
+ + + +++ + YL S + H+D+ + N+L+ DK KISD G R + A
Sbjct: 124 ALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYA 180
Query: 108 VDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENR 166
D L ++ PE +F+ SD++S+GVVL E+ + G +P
Sbjct: 181 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP---------- 230
Query: 167 SLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ N++ + + + QVL + A++ + C N +RP K++
Sbjct: 231 -----YCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIE-CWNEFPSRRPRFKDI 280
>pdb|4EUU|A Chain A, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
pdb|4EUU|B Chain B, Structure Of Bx-795 Complexed With Human Tbk1 Kinase
Domain Phosphorylated On Ser172
Length = 319
Score = 63.5 bits (153), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 83/174 (47%), Gaps = 20/174 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEV--PLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
+L ++NH+N+VKL ET +L+ EF P GSL+ + E+ + + L +
Sbjct: 60 VLKKLNHKNIVKLFAIEEETTTRHKVLIMEFCPCGSLYTVL-EEPSNAYGLPESEFLIVL 118
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILL----DDKYRAKISDFGTSRSMAVDRTHLTT 115
+V G +++L I HR+IK NI+ D + K++DFG +R + D +
Sbjct: 119 RDVVGGMNHLRENG---IVHRNIKPGNIMRVIGEDGQSVYKLTDFGAARELEDDEQFVX- 174
Query: 116 QVKGTFGYLDPEYFQSS--------QFTEKSDVYSFGVVLVELLTGQKPIRLVE 161
+ GT YL P+ ++ + ++ D++S GV TG P R E
Sbjct: 175 -LYGTEEYLHPDMYERAVLRKDHQKKYGATVDLWSIGVTFYHAATGSLPFRPFE 227
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/236 (22%), Positives = 108/236 (45%), Gaps = 33/236 (13%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI-----HE---QTEDQLPITW 52
++ +++ H NVV LLG + + +++ + +G LH+++ H T+D +
Sbjct: 81 MLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKS 140
Query: 53 EIR----LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM-A 107
+ + + +++ + YL S + H+D+ + N+L+ DK KISD G R + A
Sbjct: 141 ALEPPDFVHLVAQIAAGMEYLSSHH---VVHKDLATRNVLVYDKLNVKISDLGLFREVYA 197
Query: 108 VDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEENR 166
D L ++ PE +F+ SD++S+GVVL E+ + G +P
Sbjct: 198 ADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP---------- 247
Query: 167 SLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ N++ + + + QVL + A++ + C N +RP K++
Sbjct: 248 -----YCGYSNQDVVEMIRNRQVLPCPDDCPAWVYALMIE-CWNEFPSRRPRFKDI 297
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 62.8 bits (151), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/248 (24%), Positives = 109/248 (43%), Gaps = 47/248 (18%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFI-----------PNGSLHQYIHEQTEDQLPI 50
+L Q+ H N+V LL C + + LV+EF+ PNG +Q + +
Sbjct: 77 LLKQLRHENLVNLLEVCKKKKRWYLVFEFVDHTILDDLELFPNGLDYQVVQKYL------ 130
Query: 51 TWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR 110
++ + + HS I HRDIK NIL+ K+ DFG +R++A
Sbjct: 131 ---------FQIINGIGFCHSHN---IIHRDIKPENILVSQSGVVKLCDFGFARTLAAPG 178
Query: 111 THLTTQVKGTFGYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENR--- 166
+V T Y PE ++ + DV++ G ++ E+ G+ P+ +++ ++
Sbjct: 179 EVYDDEV-ATRWYRAPELLVGDVKYGKAVDVWAIGCLVTEMFMGE-PLFPGDSDIDQLYH 236
Query: 167 ------SLAAYFLQVINENRLFEVLDAQVLREAEKEE------VITVAMVAKRCLNLNGK 214
+L ++ N+N +F + ++E E E V +AK+CL+++
Sbjct: 237 IMMCLGNLIPRHQELFNKNPVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPD 296
Query: 215 KRPTMKEV 222
KRP E+
Sbjct: 297 KRPFCAEL 304
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/151 (26%), Positives = 75/151 (49%), Gaps = 16/151 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++ + H +VKL + + ++ EF+ GSL ++ + P+ + + +
Sbjct: 230 VMKTLQHDKLVKLHAVVTKEPI-YIITEFMAKGSLLDFLKSDEGSKQPLP--KLIDFSAQ 286
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
++ ++++ I HRD+++ANIL+ KI+DFG +R A K
Sbjct: 287 IAEGMAFIEQRNYI---HRDLRAANILVSASLVCKIADFGLARVGA----------KFPI 333
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLT 152
+ PE FT KSDV+SFG++L+E++T
Sbjct: 334 KWTAPEAINFGSFTIKSDVWSFGILLMEIVT 364
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 62.4 bits (150), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 75/156 (48%), Gaps = 8/156 (5%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEV 62
L + H+++ +L +V E+ P G L YI Q D+L E R+ + ++
Sbjct: 62 LKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEE-ETRV-VFRQI 117
Query: 63 SGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFG 122
A++Y+HS HRD+K N+L D+ ++ K+ DFG ++ + G+
Sbjct: 118 VSAVAYVHSQGYA---HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSLA 174
Query: 123 YLDPEYFQS-SQFTEKSDVYSFGVVLVELLTGQKPI 157
Y PE Q S ++DV+S G++L L+ G P
Sbjct: 175 YAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPF 210
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/159 (31%), Positives = 77/159 (48%), Gaps = 16/159 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQT--EDQLPITWEIRLGIA 59
I + ++H N+++L + L+ E+ P G L++ + + ++Q T I
Sbjct: 76 IQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKSCTFDEQRTAT------IM 129
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTS-RSMAVDRTHLTTQVK 118
E++ AL Y H I HRDIK N+LL K KI+DFG S + ++ R +
Sbjct: 130 EELADALMYCHGKKVI---HRDIKPENLLLGLKGELKIADFGWSVHAPSLRRKTMC---- 182
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + EK D++ GV+ ELL G P
Sbjct: 183 GTLDYLPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPF 221
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 87/191 (45%), Gaps = 21/191 (10%)
Query: 36 LHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA 95
++Y++ +D +P EI I + AL++L ++ I HRDIK +NILLD
Sbjct: 110 FYKYVYSVLDDVIPE--EILGKITLATVKALNHLKE--NLKIIHRDIKPSNILLDRSGNI 165
Query: 96 KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQ----FTEKSDVYSFGVVLVELL 151
K+ DFG S + VD T+ G Y+ PE S + +SDV+S G+ L EL
Sbjct: 166 KLCDFGISGQL-VDSIA-KTRDAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELA 223
Query: 152 TGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNL 211
TG+ P + S+ QV+ + Q+ E+E + CL
Sbjct: 224 TGRFPY-----PKWNSVFDQLTQVVKGD------PPQLSNSEEREFSPSFINFVNLCLTK 272
Query: 212 NGKKRPTMKEV 222
+ KRP KE+
Sbjct: 273 DESKRPKYKEL 283
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
A E+ L ++H+ + +RD+K ANILLD+ +ISD G + + + H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 119 GTFGYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSL 168
GT GY+ PE Q + +D +S G +L +LL G P R +T++ +
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
A E+ L ++H+ + +RD+K ANILLD+ +ISD G + + + H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 119 GTFGYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSL 168
GT GY+ PE Q + +D +S G +L +LL G P R +T++ +
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.0 bits (149), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 2 ILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
IL +++ H N+++L LV++ + G L Y+ E+ T +I + +
Sbjct: 63 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL-L 121
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
EV AL L+ I HRD+K NILLDD K++DFG S +D +V GT
Sbjct: 122 EVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEKLREVCGT 173
Query: 121 FGYLDPEYFQSSQ------FTEKSDVYSFGVVLVELLTGQKPI 157
YL PE + S + ++ D++S GV++ LL G P
Sbjct: 174 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 216
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
A E+ L ++H+ + +RD+K ANILLD+ +ISD G + + + H +
Sbjct: 297 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 119 GTFGYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSL 168
GT GY+ PE Q + +D +S G +L +LL G P R +T++ +
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 401
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 58/111 (52%), Gaps = 7/111 (6%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
A E+ L ++H+ + +RD+K ANILLD+ +ISD G + + + H +
Sbjct: 298 AAEIILGLEHMHNRF---VVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 119 GTFGYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSL 168
GT GY+ PE Q + +D +S G +L +LL G P R +T++ +
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEI 402
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/160 (33%), Positives = 76/160 (47%), Gaps = 16/160 (10%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGI 58
I +NH N+VKL +ETE L LV E+ G + Y+ H + +++ E R
Sbjct: 66 IXKVLNHPNIVKLFEV-IETEKTLYLVXEYASGGEVFDYLVAHGRXKEK-----EARAKF 119
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
VS A+ Y H I HRD+K+ N+LLD KI+DFG S
Sbjct: 120 RQIVS-AVQYCHQKF---IVHRDLKAENLLLDADXNIKIADFGFSNEFTFGNK--LDAFC 173
Query: 119 GTFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
G Y PE FQ ++ + DV+S GV+L L++G P
Sbjct: 174 GAPPYAAPELFQGKKYDGPEVDVWSLGVILYTLVSGSLPF 213
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 79/163 (48%), Gaps = 16/163 (9%)
Query: 2 ILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
IL +++ H N+++L LV++ + G L Y+ E+ T +I + +
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL-L 134
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
EV AL L+ I HRD+K NILLDD K++DFG S +D +V GT
Sbjct: 135 EVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEKLREVCGT 186
Query: 121 FGYLDPEYFQSSQ------FTEKSDVYSFGVVLVELLTGQKPI 157
YL PE + S + ++ D++S GV++ LL G P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 62.0 bits (149), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL ++ H +V L+ L+ E++ G L Q E + + E
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM----QLEREGIFMEDTACFYLAE 129
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S AL +LH I +RD+K NI+L+ + K++DFG + D T +T GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHXFCGTI 185
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENR 166
Y+ PE S D +S G ++ ++LTG P T ENR
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF----TGENR 226
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 12/165 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL ++ H +V L+ L+ E++ G L Q E + + E
Sbjct: 74 ILEEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFM----QLEREGIFMEDTACFYLAE 129
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+S AL +LH I +RD+K NI+L+ + K++DFG + D T +T GT
Sbjct: 130 ISMALGHLHQKG---IIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT-VTHTFCGTI 185
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENR 166
Y+ PE S D +S G ++ ++LTG P T ENR
Sbjct: 186 EYMAPEILMRSGHNRAVDWWSLGALMYDMLTGAPPF----TGENR 226
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 76/163 (46%), Gaps = 23/163 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEF-IPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
L ++ H N ++ GC L LV E+ + + S +H++ P+ + IA
Sbjct: 68 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKK-----PLQ---EVEIAA 119
Query: 61 EVSGAL---SYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
GAL +YLHS I HRD+K+ NILL + K+ DFG++ MA
Sbjct: 120 VTHGALQGLAYLHSHNMI---HRDVKAGNILLSEPGLVKLGDFGSASIMAP-----ANXF 171
Query: 118 KGTFGYLDPEY---FQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE Q+ K DV+S G+ +EL + P+
Sbjct: 172 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 214
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 61.6 bits (148), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 48/163 (29%), Positives = 75/163 (46%), Gaps = 23/163 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEF-IPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
L ++ H N ++ GC L LV E+ + + S +H++ ++ I A
Sbjct: 107 FLQKLRHPNTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI--------AA 158
Query: 61 EVSGAL---SYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
GAL +YLHS I HRD+K+ NILL + K+ DFG++ MA
Sbjct: 159 VTHGALQGLAYLHSHNMI---HRDVKAGNILLSEPGLVKLGDFGSASIMAP-----ANXF 210
Query: 118 KGTFGYLDPEY---FQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE Q+ K DV+S G+ +EL + P+
Sbjct: 211 VGTPYWMAPEVILAMDEGQYDGKVDVWSLGITCIELAERKPPL 253
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.2 bits (147), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 78/163 (47%), Gaps = 16/163 (9%)
Query: 2 ILSQIN-HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
IL +++ H N+++L LV++ + G L Y+ E+ T +I + +
Sbjct: 76 ILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYLTEKVTLSEKETRKIMRAL-L 134
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
EV AL L+ I HRD+K NILLDD K++DFG S +D V GT
Sbjct: 135 EVICALHKLN------IVHRDLKPENILLDDDMNIKLTDFGF--SCQLDPGEKLRSVCGT 186
Query: 121 FGYLDPEYFQSSQ------FTEKSDVYSFGVVLVELLTGQKPI 157
YL PE + S + ++ D++S GV++ LL G P
Sbjct: 187 PSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPPF 229
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 60.8 bits (146), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 92/197 (46%), Gaps = 28/197 (14%)
Query: 4 SQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH-EQTEDQLPITWEIRLGIAVEV 62
+ + RN VK + + + E+ N +L+ IH E Q W + ++
Sbjct: 70 AWLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRL----FRQI 125
Query: 63 SGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRS-------MAVDRTHLT- 114
ALSY+HS I HRD+K NI +D+ KI DFG +++ + +D +L
Sbjct: 126 LEALSYIHSQG---IIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPG 182
Query: 115 -----TQVKGTFGYLDPEYFQ-SSQFTEKSDVYSFGVVLVELL----TGQKPIRLVETEE 164
T GT Y+ E + + EK D+YS G++ E++ TG + + ++ ++
Sbjct: 183 SSDNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMIYPFSTGMERVNIL--KK 240
Query: 165 NRSLAAYFLQVINENRL 181
RS++ F ++N++
Sbjct: 241 LRSVSIEFPPDFDDNKM 257
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 52/106 (49%), Gaps = 4/106 (3%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
A E++ AL YLHS + I +RD+K NILLD + ++DFG + ++ T+
Sbjct: 145 AAEIASALGYLHS---LNIVYRDLKPENILLDSQGHIVLTDFGLCKE-NIEHNSTTSTFC 200
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE 164
GT YL PE + D + G VL E+L G P T E
Sbjct: 201 GTPEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPFYSRNTAE 246
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 60.8 bits (146), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 15 LGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAA 73
L C +T L V E++ G L +I + + P + A E++ L +L S
Sbjct: 86 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----VFYAAEIAIGLFFLQSKG 141
Query: 74 SIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQ 133
I +RD+K N++LD + KI+DFG + D T GT Y+ PE
Sbjct: 142 ---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEIIAYQP 197
Query: 134 FTEKSDVYSFGVVLVELLTGQKPIRLVETEE 164
+ + D ++FGV+L E+L GQ P + +E
Sbjct: 198 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 228
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/163 (30%), Positives = 71/163 (43%), Gaps = 19/163 (11%)
Query: 7 NHRNVVKLLGCCLETEVP------LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+HRN+ G ++ P LV EF GS+ I + L W I
Sbjct: 79 HHRNIATYYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEWIAY--ICR 136
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRT-HLTTQVKG 119
E+ LS+LH I HRDIK N+LL + K+ DFG S + DRT G
Sbjct: 137 EILRGLSHLHQHKVI---HRDIKGQNVLLTENAEVKLVDFGVSAQL--DRTVGRRNTFIG 191
Query: 120 TFGYLDPEYF-----QSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T ++ PE + + KSD++S G+ +E+ G P+
Sbjct: 192 TPYWMAPEVIACDENPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/151 (29%), Positives = 71/151 (47%), Gaps = 9/151 (5%)
Query: 15 LGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAA 73
L C +T L V E++ G L +I + + P + A E++ L +L S
Sbjct: 407 LHSCFQTMDRLYFVMEYVNGGDLMYHIQQVGRFKEPHA----VFYAAEIAIGLFFLQSKG 462
Query: 74 SIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQ 133
I +RD+K N++LD + KI+DFG + D T GT Y+ PE
Sbjct: 463 ---IIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGV-TTKXFCGTPDYIAPEIIAYQP 518
Query: 134 FTEKSDVYSFGVVLVELLTGQKPIRLVETEE 164
+ + D ++FGV+L E+L GQ P + +E
Sbjct: 519 YGKSVDWWAFGVLLYEMLAGQAPFEGEDEDE 549
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.1 bits (144), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITW-EIRLGIAV 60
I Q+ H ++++L ++ LV E NG +++Y+ + + P + E R +
Sbjct: 64 IHCQLKHPSILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVK---PFSENEARHFMHQ 120
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR-THLTTQVKG 119
++G L YLHS I HRD+ +N+LL KI+DFG + + + H T + G
Sbjct: 121 IITGML-YLHSHG---ILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCG 174
Query: 120 TFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T Y+ PE S +SDV+S G + LL G+ P
Sbjct: 175 TPNYISPEIATRSAHGLESDVWSLGCMFYTLLIGRPPF 212
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 84/178 (47%), Gaps = 20/178 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSL----HQYIHEQTEDQLPITWEIRLG 57
I+ + H +V L + E +V + + G L Q +H + E ++L
Sbjct: 68 IMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE-------TVKLF 120
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
I E+ AL YL + I HRD+K NILLD+ I+DF + +M T +TT +
Sbjct: 121 IC-ELVMALDYLQNQR---IIHRDMKPDNILLDEHGHVHITDFNIA-AMLPRETQITT-M 174
Query: 118 KGTFGYLDPEYFQSSQ---FTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYF 172
GT Y+ PE F S + ++ D +S GV ELL G++P + + ++ + F
Sbjct: 175 AGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTF 232
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 74/155 (47%), Gaps = 13/155 (8%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTE-DQLPITWEIRLGIAVEVSGAL 66
H N+VKL + LV E + G L + I ++ + ++ +R ++ A+
Sbjct: 65 HPNIVKLHEVFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMR-----KLVSAV 119
Query: 67 SYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
S++H + + HRD+K N+L +D KI DFG +R D L T T Y
Sbjct: 120 SHMHD---VGVVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHY 175
Query: 124 LDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
PE + + E D++S GV+L +L+GQ P +
Sbjct: 176 AAPELLNQNGYDESCDLWSLGVILYTMLSGQVPFQ 210
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS ++ +RD+K N++LD KI+DFG + D + T
Sbjct: 257 GAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC- 313
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 314 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/266 (25%), Positives = 120/266 (45%), Gaps = 47/266 (17%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI-----HEQTEDQLPITWEIRL 56
I ++ H N+V+L E LV++ + G L + I + + + I
Sbjct: 81 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----- 135
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHL 113
++ +++Y HS I HR++K N+LL K + K++DFG + + V+ +
Sbjct: 136 ----QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA 186
Query: 114 TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFL 173
GT GYL PE + +++ D+++ GV+L LL G P +E
Sbjct: 187 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF----WDE--------- 233
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAK----RCLNLNGKKRPTMKEVALELAGI 229
+++RL+ + A + E TV AK L +N KKR T + AL++ I
Sbjct: 234 ---DQHRLYAQIKAGAY-DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQ-ALKVPWI 288
Query: 230 --RASIGASVLRQCEEIDFVNYDNAR 253
R + +++ RQ + +D + NAR
Sbjct: 289 CNRERVASAIHRQ-DTVDCLKKFNAR 313
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 59.3 bits (142), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 51/99 (51%), Gaps = 3/99 (3%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS ++ +RD+K N++LD KI+DFG + D + T
Sbjct: 254 GAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFC- 310
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 311 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 58.9 bits (141), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS + +RDIK N++LD KI+DFG + D + T
Sbjct: 111 GAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC- 166
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/173 (28%), Positives = 76/173 (43%), Gaps = 9/173 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++H N++K+ + +V E G L + I ++ + +
Sbjct: 73 VLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQ 132
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQVK 118
+ AL+Y HS + H+D+K NIL D KI DFG + D +T
Sbjct: 133 MMNALAYFHSQH---VVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKSDEH--STNAA 187
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAY 171
GT Y+ PE F+ T K D++S GVV+ LLTG P EE + A Y
Sbjct: 188 GTALYMAPEVFKRD-VTFKCDIWSAGVVMYFLLTGCLPFTGTSLEEVQQKATY 239
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/194 (27%), Positives = 88/194 (45%), Gaps = 22/194 (11%)
Query: 33 NGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDK 92
+ SL ++ + + I +I IAV + AL +LHS S+ HRD+K +N+L++
Sbjct: 133 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINAL 190
Query: 93 YRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEY----FQSSQFTEKSDVYSFGVVLV 148
+ K+ DFG S + VD T G Y+ PE ++ KSD++S G+ ++
Sbjct: 191 GQVKMCDFGISGYL-VDSVAKTIDA-GCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 248
Query: 149 ELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRC 208
EL + P S F Q+ ++ E Q+ + E + +C
Sbjct: 249 ELAILRFPY--------DSWGTPFQQL---KQVVEEPSPQLPADKFSAEFVD---FTSQC 294
Query: 209 LNLNGKKRPTMKEV 222
L N K+RPT E+
Sbjct: 295 LKKNSKERPTYPEL 308
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS + +RDIK N++LD KI+DFG + D + T
Sbjct: 111 GAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC- 166
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 34/99 (34%), Positives = 50/99 (50%), Gaps = 4/99 (4%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS + +RDIK N++LD KI+DFG + D + T
Sbjct: 114 GAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFC- 169
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 170 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/197 (27%), Positives = 86/197 (43%), Gaps = 39/197 (19%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIP-------- 76
LLV E+ PNGSL +Y+ T D W +A V+ L+YLH+ +P
Sbjct: 88 LLVMEYYPNGSLXKYLSLHTSD-----WVSSCRLAHSVTRGLAYLHT--ELPRGDHYKPA 140
Query: 77 IYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR-------THLTTQVKGTFGYLDPEYF 129
I HRD+ S N+L+ + ISDFG S + +R + GT Y+ PE
Sbjct: 141 ISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGTIRYMAPEVL 200
Query: 130 QSS-------QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAY---FLQVINEN 179
+ + ++ D+Y+ G++ E+ +R + S+ Y F + +
Sbjct: 201 EGAVNLRDXESALKQVDMYALGLIYWEIF-----MRCTDLFPGESVPEYQMAFQTEVGNH 255
Query: 180 RLFEVLDAQVLREAEKE 196
FE D QVL EK+
Sbjct: 256 PTFE--DMQVLVSREKQ 270
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 58.5 bits (140), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 78/170 (45%), Gaps = 28/170 (16%)
Query: 3 LSQINHRNVVKLLGC---CLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGI 58
L + H N+++ +G +V L L+ F GSL ++ ++W I
Sbjct: 72 LPGMKHENILQFIGAEKRGTSVDVDLWLITAFHEKGSLSDFLKANV-----VSWNELCHI 126
Query: 59 AVEVSGALSYLHSAASIP---------IYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
A ++ L+YLH IP I HRDIKS N+LL + A I+DFG +
Sbjct: 127 AETMARGLAYLHE--DIPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAG 184
Query: 110 RTHLTTQVK-GTFGYLDPEY------FQSSQFTEKSDVYSFGVVLVELLT 152
++ T + GT Y+ PE FQ F + D+Y+ G+VL EL +
Sbjct: 185 KSAGDTHGQVGTRRYMAPEVLEGAINFQRDAFL-RIDMYAMGLVLWELAS 233
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 46/253 (18%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI-----HEQTEDQLPITWEIRL 56
I ++ H N+V+L E LV++ + G L + I + + + I
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----- 112
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHL 113
++ +++Y HS I HR++K N+LL K + K++DFG + + V+ +
Sbjct: 113 ----QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA 163
Query: 114 TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFL 173
GT GYL PE + +++ D+++ GV+L LL G P +E
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF----WDE--------- 210
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAK----RCLNLNGKKRPTMKEVALELAGI 229
+++RL+ + A + E TV AK L +N KKR T + AL++ I
Sbjct: 211 ---DQHRLYAQIKAGAY-DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQ-ALKVPWI 265
Query: 230 --RASIGASVLRQ 240
R + +++ RQ
Sbjct: 266 CNRERVASAIHRQ 278
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 64/253 (25%), Positives = 113/253 (44%), Gaps = 46/253 (18%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI-----HEQTEDQLPITWEIRL 56
I ++ H N+V+L E LV++ + G L + I + + + I
Sbjct: 57 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----- 111
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHL 113
++ +++Y HS I HR++K N+LL K + K++DFG + + V+ +
Sbjct: 112 ----QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA 162
Query: 114 TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFL 173
GT GYL PE + +++ D+++ GV+L LL G P +E
Sbjct: 163 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF----WDE--------- 209
Query: 174 QVINENRLFEVLDAQVLREAEKEEVITVAMVAK----RCLNLNGKKRPTMKEVALELAGI 229
+++RL+ + A + E TV AK L +N KKR T + AL++ I
Sbjct: 210 ---DQHRLYAQIKAGAY-DYPSPEWDTVTPEAKSLIDSMLTVNPKKRITADQ-ALKVPWI 264
Query: 230 --RASIGASVLRQ 240
R + +++ RQ
Sbjct: 265 CNRERVASAIHRQ 277
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 50/158 (31%), Positives = 74/158 (46%), Gaps = 17/158 (10%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLGIA 59
L + H +++KL ++V E+ G L YI E+ TED+ ++
Sbjct: 63 LKLLRHPHIIKLYDVITTPTDIVMVIEY-AGGELFDYIVEKKRMTEDEGRRFFQ------ 115
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
++ A+ Y H I HRD+K N+LLDD KI+DFG S M D L T G
Sbjct: 116 -QIICAIEYCHRHK---IVHRDLKPENLLLDDNLNVKIADFGLSNIMT-DGNFLKTSC-G 169
Query: 120 TFGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKP 156
+ Y PE + + DV+S G+VL +L G+ P
Sbjct: 170 SPNYAAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 58.2 bits (139), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 77/164 (46%), Gaps = 22/164 (13%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI-----HEQTEDQLPITWEIRL 56
I ++ H N+V+L E LV++ + G L + I + + + I
Sbjct: 58 ICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQ----- 112
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHL 113
++ +++Y HS I HR++K N+LL K + K++DFG + + V+ +
Sbjct: 113 ----QILESIAYCHSNG---IVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEA 163
Query: 114 TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT GYL PE + +++ D+++ GV+L LL G P
Sbjct: 164 WHGFAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPF 207
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 19/162 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLGI 58
+L +I H N+V L T LV + + G L I E+ TE + +
Sbjct: 59 VLKKIKHENIVTLEDIYESTTHYYLVMQLVSGGELFDRILERGVYTEKDASL-------V 111
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLTT 115
+V A+ YLH I HRD+K N+L ++ + I+DFG S+ +++ + +
Sbjct: 112 IQQVLSAVKYLHENG---IVHRDLKPENLLYLTPEENSKIMITDFGLSK---MEQNGIMS 165
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT GY+ PE +++ D +S GV+ LL G P
Sbjct: 166 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVITYILLCGYPPF 207
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 72/158 (45%), Gaps = 14/158 (8%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGIAV 60
L H +++KL +V E++ G L YI H + E+ E R +
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM-----EARR-LFQ 118
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ A+ Y H + HRD+K N+LLD AKI+DFG S M+ D L T G+
Sbjct: 119 QILSAVDYCHRHMVV---HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRTSC-GS 173
Query: 121 FGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
Y PE + + D++S GV+L LL G P
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ LS+ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 112 LLQGLSFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 167
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLG 57
IL+ +H +VKLLG ++ EF P G++ + E TE Q+ +
Sbjct: 61 ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV------- 113
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ ++ AL++LHS I HRD+K+ N+L+ + +++DFG S + +
Sbjct: 114 VCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVS-AKNLKTLQKRDSF 169
Query: 118 KGTFGYLDPEY-----FQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE + + + K+D++S G+ L+E+ + P
Sbjct: 170 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 213
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 58.2 bits (139), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 80/164 (48%), Gaps = 20/164 (12%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLG 57
IL+ +H +VKLLG ++ EF P G++ + E TE Q+ +
Sbjct: 69 ILATCDHPYIVKLLGAYYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQV------- 121
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ ++ AL++LHS I HRD+K+ N+L+ + +++DFG S + +
Sbjct: 122 VCRQMLEALNFLHSKR---IIHRDLKAGNVLMTLEGDIRLADFGVS-AKNLKTLQKRDSF 177
Query: 118 KGTFGYLDPEY-----FQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE + + + K+D++S G+ L+E+ + P
Sbjct: 178 IGTPYWMAPEVVMCETMKDTPYDYKADIWSLGITLIEMAQIEPP 221
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 70/141 (49%), Gaps = 8/141 (5%)
Query: 30 FIPNGSLHQYIHEQTEDQL---PITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSAN 86
F + SL E+ D PIT E + + +V+ + +L S I HRD+ + N
Sbjct: 173 FQEDKSLSDVEEEEDSDGFYKEPITMEDLISYSFQVARGMEFLSSRKCI---HRDLAARN 229
Query: 87 ILLDDKYRAKISDFGTSRSMAVDRTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGV 145
ILL + KI DFG +R + + ++ + ++ PE ++ KSDV+S+GV
Sbjct: 230 ILLSENNVVKICDFGLARDIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGV 289
Query: 146 VLVELLT-GQKPIRLVETEEN 165
+L E+ + G P V+ +E+
Sbjct: 290 LLWEIFSLGGSPYPGVQMDED 310
Score = 32.0 bits (71), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 2/46 (4%)
Query: 2 ILSQINHR-NVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTE 45
IL+ I H NVV LLG C + PL+V E+ G+L Y+ + +
Sbjct: 83 ILTHIGHHLNVVNLLGACTKQGGPLMVIVEYCKYGNLSNYLKSKRD 128
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 57.8 bits (138), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L +++H N++KL ++ +V E G L I ++ + I +
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQ 129
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVK 118
V ++Y+H I HRD+K NILL+ K + KI DFG S + T + ++
Sbjct: 130 VFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT Y+ PE + + + EK DV+S GV+L LL+G P
Sbjct: 185 GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 57.4 bits (137), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L +++H N++KL ++ +V E G L I ++ + I +
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQ 129
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQVK 118
V ++Y+H I HRD+K NILL+ K + KI DFG S + T + ++
Sbjct: 130 VFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT Y+ PE + + + EK DV+S GV+L LL+G P
Sbjct: 185 GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 78/159 (49%), Gaps = 13/159 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L +++H N++KL ++ +V E G L I ++ + I +
Sbjct: 74 LLKKLDHPNIMKLFEILEDSSSFYIVGELYTGGELFDEIIKRKR----FSEHDAARIIKQ 129
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQVK 118
V ++Y+H I HRD+K NILL+ K + KI DFG S + T + ++
Sbjct: 130 VFSGITYMHKHN---IVHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI- 184
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT Y+ PE + + + EK DV+S GV+L LL+G P
Sbjct: 185 GTAYYIAPEVLRGT-YDEKCDVWSAGVILYILLSGTPPF 222
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 247
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 167
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 168 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 72/164 (43%), Gaps = 19/164 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLG 57
IL+ +H N+VKLL ++ EF G++ + E TE Q+ +
Sbjct: 60 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV------- 112
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + AL+YLH I HRD+K+ NIL K++DFG S
Sbjct: 113 VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSF 169
Query: 118 KGTFGYLDPEYF-----QSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE + + K+DV+S G+ L+E+ + P
Sbjct: 170 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 213
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 79 HRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQS-----SQ 133
HRDIK N+LLD +++DFG+ M D T ++ GT Y+ PE Q+ +
Sbjct: 198 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 257
Query: 134 FTEKSDVYSFGVVLVELLTGQKPI---RLVET 162
+ + D +S GV + E+L G+ P LVET
Sbjct: 258 YGPECDWWSLGVCMYEMLYGETPFYAESLVET 289
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 76/169 (44%), Gaps = 31/169 (18%)
Query: 6 INHRNVVKLL-----GCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+ H N+++ + G LE E+ L+ F GSL Y+ ITW +A
Sbjct: 66 MKHENLLQFIAAEKRGSNLEVEL-WLITAFHDKGSLTDYLKGNI-----ITWNELCHVAE 119
Query: 61 EVSGALSYLHSAASIP----------IYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR 110
+S LSYLH +P I HRD KS N+LL A ++DFG + +
Sbjct: 120 TMSRGLSYLHE--DVPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGK 177
Query: 111 THLTTQVK-GTFGYLDPEY------FQSSQFTEKSDVYSFGVVLVELLT 152
T + GT Y+ PE FQ F + D+Y+ G+VL EL++
Sbjct: 178 PPGDTHGQVGTRRYMAPEVLEGAINFQRDAFL-RIDMYAMGLVLWELVS 225
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 49/92 (53%), Gaps = 8/92 (8%)
Query: 79 HRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQS-----SQ 133
HRDIK N+LLD +++DFG+ M D T ++ GT Y+ PE Q+ +
Sbjct: 214 HRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPDYISPEILQAMEDGMGK 273
Query: 134 FTEKSDVYSFGVVLVELLTGQKPI---RLVET 162
+ + D +S GV + E+L G+ P LVET
Sbjct: 274 YGPECDWWSLGVCMYEMLYGETPFYAESLVET 305
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 118
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 174
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 175 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 206
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLP--LIKSYLFQ 115
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 171
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 172 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS + +RDIK N++LD KI+DFG + D +
Sbjct: 111 GAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC- 166
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 167
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 62 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 118
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 119 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 174
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 175 WYRAPEILLGXKYYSTAVDIWSLGCIFAEMVT 206
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 167
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 167
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 168 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 110
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 166
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 110
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 166
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS + +RDIK N++LD KI+DFG + D +
Sbjct: 116 GAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC- 171
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 134 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 225
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 168
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 169 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 110
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 166
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 247
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/100 (35%), Positives = 55/100 (55%), Gaps = 7/100 (7%)
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVK 118
++ L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+
Sbjct: 132 QILRGLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYV 188
Query: 119 GTFGYLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
T Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 189 ATRWYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 227
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 18/134 (13%)
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTT 115
L I ++++ A+ +LHS + HRD+K +NI K+ DFG +M D T
Sbjct: 167 LHIFIQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 223
Query: 116 QVK-----------GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL----TGQKPIRLV 160
GT Y+ PE + ++ K D++S G++L ELL T + +R++
Sbjct: 224 LTPMPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELLYSFSTQMERVRII 283
Query: 161 ETEENRSLAAYFLQ 174
N F Q
Sbjct: 284 TDVRNLKFPLLFTQ 297
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 229
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS ++ +RD+K N++LD KI+DFG + D +
Sbjct: 115 GAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC- 171
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 172 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 138 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 229
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 134 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 225
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS ++ +RD+K N++LD KI+DFG + D +
Sbjct: 114 GAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC- 170
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 171 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 144 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 235
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 136 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 227
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/161 (27%), Positives = 73/161 (45%), Gaps = 18/161 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFI------PNGSLHQYIHEQTEDQLPITWEIR 55
IL H N++ + L VP ++ + LHQ IH P+T E
Sbjct: 106 ILKHFKHDNIIAIKDI-LRPTVPYGEFKSVYVVLDLMESDLHQIIHSSQ----PLTLEHV 160
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTH 112
++ L Y+HSA I HRD+K +N+L+++ KI DFG +R + + +
Sbjct: 161 RYFLYQLLRGLKYMHSAQVI---HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 113 LTTQVKGTFGYLDPEYFQS-SQFTEKSDVYSFGVVLVELLT 152
T+ T Y PE S ++T+ D++S G + E+L
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 258
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 141 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 232
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 142 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 233
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 133 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 224
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H T+ T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 74/162 (45%), Gaps = 20/162 (12%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-------LVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
IL H N++ + L VP +V + + LHQ IH P+T E
Sbjct: 107 ILKHFKHDNIIAIKDI-LRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ----PLTLEH 160
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRT 111
++ L Y+HSA I HRD+K +N+L+++ KI DFG +R + +
Sbjct: 161 VRYFLYQLLRGLKYMHSAQVI---HRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQ 217
Query: 112 HLTTQVKGTFGYLDPEYFQS-SQFTEKSDVYSFGVVLVELLT 152
+ T+ T Y PE S ++T+ D++S G + E+L
Sbjct: 218 YFMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLA 259
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 56.6 bits (135), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 86/194 (44%), Gaps = 22/194 (11%)
Query: 33 NGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDK 92
+ SL ++ + + I +I IAV + AL +LHS S+ HRD+K +N+L++
Sbjct: 89 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINAL 146
Query: 93 YRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEY----FQSSQFTEKSDVYSFGVVLV 148
+ K+ DFG S + D G Y+ PE ++ KSD++S G+ ++
Sbjct: 147 GQVKMCDFGISGYLVDDVAKDID--AGCKPYMAPERINPELNQKGYSVKSDIWSLGITMI 204
Query: 149 ELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRC 208
EL + P S F Q+ ++ E Q+ + E + +C
Sbjct: 205 ELAILRFPY--------DSWGTPFQQL---KQVVEEPSPQLPADKFSAEFVD---FTSQC 250
Query: 209 LNLNGKKRPTMKEV 222
L N K+RPT E+
Sbjct: 251 LKKNSKERPTYPEL 264
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 3/99 (3%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS ++ +RD+K N++LD KI+DFG + D +
Sbjct: 116 GAEIVSALDYLHSEKNV--VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFC- 172
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 173 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/236 (25%), Positives = 100/236 (42%), Gaps = 26/236 (11%)
Query: 26 LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSA 85
LV ++ G L + + ED+LP E+ E+ A+ +H + HRDIK
Sbjct: 151 LVMDYYVGGDLLTLL-SKFEDRLPE--EMARFYLAEMVIAIDSVHQLHYV---HRDIKPD 204
Query: 86 NILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQS-----SQFTEKSDV 140
NIL+D +++DFG+ + D T ++ GT Y+ PE Q+ ++ + D
Sbjct: 205 NILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEGGKGRYGPECDW 264
Query: 141 YSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVIT 200
+S GV + E+L G+ P SL + +++N F+ QV +E + +
Sbjct: 265 WSLGVCMYEMLYGETPFYA------ESLVETYGKIMNHKERFQ-FPTQVTDVSENAKDLI 317
Query: 201 VAMVAKR--CLNLNG----KKRPTMKEVALELAGIRASIGASVLRQCEEIDFVNYD 250
++ R L NG KK P ++ IR + D N+D
Sbjct: 318 RRLICSREHRLGQNGIEDFKKHPFFS--GIDWDNIRNCEAPYIPEVSSPTDTSNFD 371
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/157 (25%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++ H+N+V+L + LV+EF + L +Y D P EI +
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDP---EIVKSFLFQ 109
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L + HS + HRD+K N+L++ K++DFG +R+ + + +V T
Sbjct: 110 LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEVV-TL 165
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
Y P+ F + ++ D++S G + EL +P+
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAARPL 202
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS + +RDIK N++LD KI+DFG + D +
Sbjct: 111 GAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC- 166
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPAFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 49/99 (49%), Gaps = 4/99 (4%)
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
E+ AL YLHS + +RDIK N++LD KI+DFG + D +
Sbjct: 111 GAEIVSALEYLHSRDVV---YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFC- 166
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT YL PE + + + D + GVV+ E++ G+ P
Sbjct: 167 GTPEYLAPEVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 59 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 115
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 116 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 170
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 171 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 114
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 110
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 114
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 110
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 165
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 166 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLP--LIKSYLFQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPL--PLIKSYLFQ 114
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 56 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPL--PLIKSYLFQ 112
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 113 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 167
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 168 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 200
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLGI 58
+L +I H N+V L L+ + + G L I E+ TE RL
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RL-- 121
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANIL---LDDKYRAKISDFGTSRSMAVDRTHLTT 115
+V A+ YLH + I HRD+K N+L LD+ + ISDFG S+ D + +
Sbjct: 122 IFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLS 176
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT GY+ PE +++ D +S GV+ LL G P
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + K++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPL--PLIKSYLFQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLP--LIKSYLFQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 9/153 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L Q+ H N+V LL LV+E+ H +HE Q + + I +
Sbjct: 55 MLKQLKHPNLVNLLEVFRRKRRLHLVFEYCD----HTVLHELDRYQRGVPEHLVKSITWQ 110
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
A+++ H I HRD+K NIL+ K+ DFG +R + + +V T
Sbjct: 111 TLQAVNFCHKHNCI---HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEV-ATR 166
Query: 122 GYLDPEYF-QSSQFTEKSDVYSFGVVLVELLTG 153
Y PE +Q+ DV++ G V ELL+G
Sbjct: 167 WYRSPELLVGDTQYGPPVDVWAIGCVFAELLSG 199
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 56.2 bits (134), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L +++ +P+ + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLP--LIKSYLFQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + K++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLGI 58
+L +I H N+V L L+ + + G L I E+ TE RL
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGFYTERDAS-----RL-- 121
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANIL---LDDKYRAKISDFGTSRSMAVDRTHLTT 115
+V A+ YLH + I HRD+K N+L LD+ + ISDFG S+ D + +
Sbjct: 122 IFQVLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLS 176
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT GY+ PE +++ D +S GV+ LL G P
Sbjct: 177 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/156 (26%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + K++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R + D
Sbjct: 190 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 246
Query: 110 RTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 247 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 303
Score = 32.7 bits (73), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 78 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 127
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 73/162 (45%), Gaps = 18/162 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLGI 58
+L +I H N+V L LV + + G L I E+ TE IR
Sbjct: 73 VLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTL--IR--- 127
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILL---DDKYRAKISDFGTSRSMAVDRTHLTT 115
+V A+ YLH + I HRD+K N+L D++ + ISDFG S+ + + +
Sbjct: 128 --QVLDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKMEG--KGDVMS 180
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT GY+ PE +++ D +S GV+ LL G P
Sbjct: 181 TACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/158 (30%), Positives = 71/158 (44%), Gaps = 14/158 (8%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGIAV 60
L H +++KL +V E++ G L YI H + E+ E R +
Sbjct: 65 LKLFRHPHIIKLYQVISTPTDFFMVMEYVSGGELFDYICKHGRVEEM-----EARR-LFQ 118
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ A+ Y H + HRD+K N+LLD AKI+DFG S M+ D L G+
Sbjct: 119 QILSAVDYCHRHMVV---HRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRDSC-GS 173
Query: 121 FGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
Y PE + + D++S GV+L LL G P
Sbjct: 174 PNYAAPEVISGRLYAGPEVDIWSCGVILYALLCGTLPF 211
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L +I H N+V L L+ + + G L I E+ T + +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF----YTERDASRLIFQ 124
Query: 62 VSGALSYLHSAASIPIYHRDIKSANIL---LDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
V A+ YLH + I HRD+K N+L LD+ + ISDFG S+ D + +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTAC 179
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT GY+ PE +++ D +S GV+ LL G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R + D
Sbjct: 188 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 244
Query: 110 RTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 245 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 301
Score = 33.1 bits (74), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 76 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 125
>pdb|2VN9|A Chain A, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
pdb|2VN9|B Chain B, Crystal Structure Of Human Calcium Calmodulin Dependent
Protein Kinase Ii Delta Isoform 1, Camkd
Length = 301
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 77 IYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQ 133
I HRD+K N+LL K + K++DFG + + D+ GT GYL PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQQAWFG-FAGTPGYLSPEVLRKDP 182
Query: 134 FTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREA 193
+ + D+++ GV+L LL G P +E +++RL++ + A +
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPF----WDE------------DQHRLYQQIKAGAY-DF 225
Query: 194 EKEEVITVAMVAK----RCLNLNGKKRPTMKEVALELAGIRASIGASVLRQCEEIDFVNY 249
E TV AK + L +N KR T E + S AS++ + E +D +
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKK 285
Query: 250 DNAR 253
NAR
Sbjct: 286 FNAR 289
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R + D
Sbjct: 195 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 251
Query: 110 RTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 252 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 308
Score = 32.7 bits (73), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 83 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 132
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 5/117 (4%)
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+T E + + +V+ + +L S I HRD+ + NILL +K KI DFG +R + D
Sbjct: 197 LTLEHLICYSFQVAKGMEFLASRKCI---HRDLAARNILLSEKNVVKICDFGLARDIYKD 253
Query: 110 RTHL-TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLT-GQKPIRLVETEE 164
++ + ++ PE +T +SDV+SFGV+L E+ + G P V+ +E
Sbjct: 254 PDYVRKGDARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGVKIDE 310
Score = 32.7 bits (73), Expect = 0.24, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 28/50 (56%), Gaps = 1/50 (2%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLV-YEFIPNGSLHQYIHEQTEDQLP 49
I++ +H NVV LLG C + PL+V EF G+L Y+ + + +P
Sbjct: 85 ILIHIGHHLNVVNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVP 134
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/159 (29%), Positives = 71/159 (44%), Gaps = 12/159 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L +I H N+V L L+ + + G L I E+ T + +
Sbjct: 69 VLHKIKHPNIVALDDIYESGGHLYLIMQLVSGGELFDRIVEKGF----YTERDASRLIFQ 124
Query: 62 VSGALSYLHSAASIPIYHRDIKSANIL---LDDKYRAKISDFGTSRSMAVDRTHLTTQVK 118
V A+ YLH + I HRD+K N+L LD+ + ISDFG S+ D + +
Sbjct: 125 VLDAVKYLHD---LGIVHRDLKPENLLYYSLDEDSKIMISDFGLSK--MEDPGSVLSTAC 179
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT GY+ PE +++ D +S GV+ LL G P
Sbjct: 180 GTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 79/162 (48%), Gaps = 18/162 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVP--LLVYEFIPNGSLHQY--IHEQTEDQLPITWEIRLG 57
IL +++H NVVKL+ + +V+E + G + + + +EDQ ++
Sbjct: 89 ILKKLDHPNVVKLVEVLDDPNEDHLYMVFELVNQGPVMEVPTLKPLSEDQARFYFQ---- 144
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
++ + YLH I HRDIK +N+L+ + KI+DFG S L+ V
Sbjct: 145 ---DLIKGIEYLHYQK---IIHRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTV 198
Query: 118 KGTFGYLDPEYFQSSQ--FTEKS-DVYSFGVVLVELLTGQKP 156
GT ++ PE ++ F+ K+ DV++ GV L + GQ P
Sbjct: 199 -GTPAFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L ++ +P+ + +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPL--PLIKSYLFQ 114
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L ++ +P+ + +
Sbjct: 57 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPL--PLIKSYLFQ 113
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 114 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 168
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 169 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 201
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 55.5 bits (132), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 75/160 (46%), Gaps = 15/160 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSL-HQYIHEQTEDQLPITWEIRLGIAV 60
+L ++H N++KL + LV E G L + IH +++ I+
Sbjct: 89 VLKLLDHPNIMKLYDFFEDKRNYYLVMECYKGGELFDEIIHRMKFNEVDAAVIIK----- 143
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQV 117
+V ++YLH I HRD+K N+LL+ K + KI DFG S + +
Sbjct: 144 QVLSGVTYLHKHN---IVHRDLKPENLLLESKEKDALIKIVDFGLS--AVFENQKKMKER 198
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT Y+ PE + ++ EK DV+S GV+L LL G P
Sbjct: 199 LGTAYYIAPEVLRK-KYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L ++ +P+ + +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPL--PLIKSYLFQ 114
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/153 (26%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+EF+ + L ++ +P+ + +
Sbjct: 55 LLKELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLP--LIKSYLFQ 111
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 112 LLQGLAFCHSHR---VLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 166
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 167 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 199
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/134 (28%), Positives = 60/134 (44%), Gaps = 18/134 (13%)
Query: 56 LGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT- 114
L I ++++ A+ +LHS + HRD+K +NI K+ DFG +M D T
Sbjct: 121 LHIFLQIAEAVEFLHSKG---LMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTV 177
Query: 115 ----------TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL----TGQKPIRLV 160
T GT Y+ PE + ++ K D++S G++L ELL T + +R +
Sbjct: 178 LTPMPAYARHTGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELLYPFSTQMERVRTL 237
Query: 161 ETEENRSLAAYFLQ 174
N F Q
Sbjct: 238 TDVRNLKFPPLFTQ 251
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 121
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 122 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 176
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 124
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 125 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 178
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2WEL|A Chain A, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 327
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 52/184 (28%), Positives = 83/184 (45%), Gaps = 25/184 (13%)
Query: 77 IYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQ 133
I HRD+K N+LL K + K++DFG + + D+ GT GYL PE +
Sbjct: 124 IVHRDLKPENLLLASKSKGAAVKLADFGLAIEVQGDQ-QAWFGFAGTPGYLSPEVLRKDP 182
Query: 134 FTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREA 193
+ + D+++ GV+L LL G P +E +++RL++ + A +
Sbjct: 183 YGKPVDMWACGVILYILLVGYPPF----WDE------------DQHRLYQQIKAGAY-DF 225
Query: 194 EKEEVITVAMVAK----RCLNLNGKKRPTMKEVALELAGIRASIGASVLRQCEEIDFVNY 249
E TV AK + L +N KR T E + S AS++ + E +D +
Sbjct: 226 PSPEWDTVTPEAKDLINKMLTINPAKRITASEALKHPWICQRSTVASMMHRQETVDCLKK 285
Query: 250 DNAR 253
NAR
Sbjct: 286 FNAR 289
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 55.1 bits (131), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 66 ILKEIQHPNVITLHEVYENKTDVILILELVAGGELFDFLAEKES----LTEEEATEFLKQ 121
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 122 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 176
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 177 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 124
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 125 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 178
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 67 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 125
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 126 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 179
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 180 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 221
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/170 (26%), Positives = 73/170 (42%), Gaps = 18/170 (10%)
Query: 6 INHRNVVKLLGCCLE----TEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
NH N+++L+ CL L+ F G+L I + +T + L + +
Sbjct: 83 FNHPNILRLVAYCLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILWLLLG 142
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV----DRTHLTTQ- 116
+ L +H+ HRD+K NILL D+ + + D G+ + R LT Q
Sbjct: 143 ICRGLEAIHAKGYA---HRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQD 199
Query: 117 ---VKGTFGYLDPEYFQSSQ---FTEKSDVYSFGVVLVELLTGQKPIRLV 160
+ T Y PE F E++DV+S G VL ++ G+ P +V
Sbjct: 200 WAAQRCTISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYDMV 249
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 85 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 143
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 144 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 197
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 198 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 239
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 15/160 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSL-HQYIHEQTEDQLPITWEIRLGIAV 60
+L Q++H N++KL + LV E G L + I Q ++ I
Sbjct: 74 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-----IMK 128
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQV 117
+V +YLH I HRD+K N+LL+ K R KI DFG S V +
Sbjct: 129 QVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MKER 183
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT Y+ PE + ++ EK DV+S GV+L LL G P
Sbjct: 184 LGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 222
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 70 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 128
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 129 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 182
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 183 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 224
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 124
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 125 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 178
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 78 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 136
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 137 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 190
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H + T
Sbjct: 140 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 231
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 55.1 bits (131), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 52/96 (54%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTH--LTTQVKGTFG 122
L Y+HSA + HRD+K +N+LL+ KI DFG +R D H + T
Sbjct: 141 GLKYIHSAN---VLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSN-RPI 232
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/172 (33%), Positives = 79/172 (45%), Gaps = 25/172 (14%)
Query: 6 INHR-----NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
INHR N+V+ L ++ E+ G L++ I +ED E R
Sbjct: 68 INHRSLRHPNIVRFKEVILTPTHLAIIMEYASGGELYERICNAGRFSED------EARFF 121
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDK--YRAKISDFGTSRSMAVDRTHLTT 115
+SG +SY HS + I HRD+K N LLD R KI DFG S+S + +T
Sbjct: 122 FQQLLSG-VSYCHS---MQICHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 177
Query: 116 QVKGTFGYLDPEYFQSSQFTEK-SDVYSFGVVLVELLTGQKPIRLVETEENR 166
GT Y+ PE ++ K +DV+S GV L +L G P + EE R
Sbjct: 178 --VGTPAYIAPEVLLRQEYDGKIADVWSCGVTLYVMLVGAYPFE--DPEEPR 225
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 124
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 125 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 178
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 124
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 125 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 178
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 179 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 54.7 bits (130), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 78 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 136
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 137 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 190
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 191 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 232
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 95/211 (45%), Gaps = 41/211 (19%)
Query: 2 ILSQINHRNVVKLLGCCLE--------TEVP-----LLVYEFIPNGSLHQYIH-EQTEDQ 47
+L+ +NH+ VV+ LE T V + E+ N +L+ IH E Q
Sbjct: 55 LLASLNHQYVVRYYAAWLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQ 114
Query: 48 LPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRS-- 105
W + ++ ALSY+HS I HR++K NI +D+ KI DFG +++
Sbjct: 115 RDEYWRL----FRQILEALSYIHSQG---IIHRNLKPXNIFIDESRNVKIGDFGLAKNVH 167
Query: 106 -----MAVDRTHLT------TQVKGTFGYLDPEYFQ-SSQFTEKSDVYSFGVVLVELL-- 151
+ +D +L T GT Y+ E + + EK D YS G++ E +
Sbjct: 168 RSLDILKLDSQNLPGSSDNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXIYP 227
Query: 152 --TGQKPIRLVETEENRSLAAYFLQVINENR 180
TG + + ++ ++ RS++ F ++N+
Sbjct: 228 FSTGXERVNIL--KKLRSVSIEFPPDFDDNK 256
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 74 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 132
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 133 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 186
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 187 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 228
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/255 (23%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 6 INHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGA 65
+ H N+V+L E LV++ + G L ED + + + +
Sbjct: 60 LKHSNIVRLHDSISEEGFHYLVFDLVTGGELF-------EDIVAREYYSEADASHCIQQI 112
Query: 66 LSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFG 122
L + + + HRD+K N+LL K + K++DFG + + D+ GT G
Sbjct: 113 LEAVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFG-FAGTPG 171
Query: 123 YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
YL PE + + + D+++ GV+L LL G P +E ++++L+
Sbjct: 172 YLSPEVLRKEAYGKPVDIWACGVILYILLVGYPPF----WDE------------DQHKLY 215
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLN----LNGKKRPTMKEVALELAGIRASIGASVL 238
+ + A + E TV AK +N +N KR T E + S AS++
Sbjct: 216 QQIKAGAY-DFPSPEWDTVTPEAKNLINQMLTINPAKRITAHEALKHPWVCQRSTVASMM 274
Query: 239 RQCEEIDFVNYDNAR 253
+ E ++ + NAR
Sbjct: 275 HRQETVECLKKFNAR 289
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIY-V 124
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 125 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 178
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 79 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 137
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 138 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 191
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 192 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 233
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 57/230 (24%), Positives = 102/230 (44%), Gaps = 40/230 (17%)
Query: 8 HRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQL---PITWEIRLGIAVEVSG 64
H NV++ + + + E +L +Y+ ++ L PIT + + +
Sbjct: 77 HPNVIRYFCTEKDRQFQYIAIELC-AATLQEYVEQKDFAHLGLEPIT------LLQQTTS 129
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-----DKYRAKISDFGTSRSMAVDRTHLT--TQV 117
L++LHS + I HRD+K NIL+ K +A ISDFG + +AV R + + V
Sbjct: 130 GLAHLHS---LNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGV 186
Query: 118 KGTFGYLDPEYFQSS---QFTEKSDVYSFGVVLVELLT-GQKPI-RLVETEENRSLAAYF 172
GT G++ PE T D++S G V +++ G P + ++ + N L A
Sbjct: 187 PGTEGWIAPEMLSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGKSLQRQANILLGACS 246
Query: 173 LQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
L ++ EK E + + ++ + ++ +KRP+ K V
Sbjct: 247 LDCLH---------------PEKHEDVIARELIEKMIAMDPQKRPSAKHV 281
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 6 INHR-----NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
INHR N+V+ L +V E+ G L + I +ED E R
Sbjct: 66 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED------EARFF 119
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDK--YRAKISDFGTSRSMAVDRTHLTT 115
+SG +SY H+ + + HRD+K N LLD R KI DFG S+S + +T
Sbjct: 120 FQQLISG-VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 175
Query: 116 QVKGTFGYLDPEYFQSSQFTEK-SDVYSFGVVLVELLTGQKPIRLVETEEN 165
GT Y+ PE ++ K +DV+S GV L +L G P E +N
Sbjct: 176 V--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 224
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 54.7 bits (130), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 100 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 158
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 159 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 212
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 213 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 170
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 171 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 223
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 19/162 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI---HEQTEDQLPITWEIRLGI 58
+L Q++H N++KL + LV E G L I + +E + I
Sbjct: 57 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFSEVDAAV-------I 109
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTT 115
+V +YLH I HRD+K N+LL+ K R KI DFG S V
Sbjct: 110 MKQVLSGTTYLHKHN---IVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGK--MK 164
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
+ GT Y+ PE + ++ EK DV+S GV+L LL G P
Sbjct: 165 ERLGTAYYIAPEVLRK-KYDEKCDVWSCGVILYILLCGYPPF 205
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 39/157 (24%), Positives = 74/157 (47%), Gaps = 9/157 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++ H+N+V+L + LV+EF + L +Y D P EI +
Sbjct: 54 LLKELKHKNIVRLHDVLHSDKKLTLVFEFC-DQDLKKYFDSCNGDLDP---EIVKSFLFQ 109
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L + HS + HRD+K N+L++ K+++FG +R+ + + +V T
Sbjct: 110 LLKGLGFCHSRN---VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TL 165
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
Y P+ F + ++ D++S G + EL +P+
Sbjct: 166 WYRPPDVLFGAKLYSTSIDMWSAGCIFAELANAGRPL 202
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 3 LSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL 56
L H NVV+L C ET++ LV+E + + L Y+ + E +P E
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYLDKVPEPGVPT--ETIK 123
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+ ++ L +LHS + HRD+K NIL+ + K++DFG +R + T
Sbjct: 124 DMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
V T Y PE S + D++S G + E+ +KP+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 3 LSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL 56
L H NVV+L C ET++ LV+E + + L Y+ + E +P E
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYLDKVPEPGVPT--ETIK 123
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+ ++ L +LHS + HRD+K NIL+ + K++DFG +R + T
Sbjct: 124 DMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
V T Y PE S + D++S G + E+ +KP+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 77/171 (45%), Gaps = 23/171 (13%)
Query: 6 INHR-----NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
INHR N+V+ L +V E+ G L + I +ED E R
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED------EARFF 120
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDK--YRAKISDFGTSRSMAVDRTHLTT 115
+SG +SY H+ + + HRD+K N LLD R KI DFG S+S + +T
Sbjct: 121 FQQLISG-VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICDFGYSKSSVLHSQPKST 176
Query: 116 QVKGTFGYLDPEYFQSSQFTEK-SDVYSFGVVLVELLTGQKPIRLVETEEN 165
GT Y+ PE ++ K +DV+S GV L +L G P E +N
Sbjct: 177 V--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 142
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 143 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 195
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSL-HQYIHEQTEDQLPITWEIRLGIAV 60
+L Q++H N++KL + LV E G L + I + ++ IR
Sbjct: 79 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----- 133
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQV 117
+V ++Y+H I HRD+K N+LL+ K + +I DFG S TH
Sbjct: 134 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASK 183
Query: 118 K-----GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
K GT Y+ PE + + EK DV+S GV+L LL+G P
Sbjct: 184 KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 13/160 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +I H NV+ L +L+ E + G L ++ E+ +T E +
Sbjct: 67 ILKEIQHPNVITLHEVYENKTDVILIGELVAGGELFDFLAEKES----LTEEEATEFLKQ 122
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDD----KYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + I H D+K NI+L D K R KI DFG + +D + +
Sbjct: 123 ILNGVYYLHS---LQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHK--IDFGNEFKNI 177
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 178 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 79/174 (45%), Gaps = 29/174 (16%)
Query: 6 INHR-----NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
INHR N+V+ L +V E+ G L + I +ED E R
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED------EARFF 120
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDK--YRAKISDFGTSRSMAVDRTHLTT 115
+SG +SY H+ + + HRD+K N LLD R KI+DFG S++ L +
Sbjct: 121 FQQLISG-VSYAHA---MQVAHRDLKLENTLLDGSPAPRLKIADFGYSKASV-----LHS 171
Query: 116 QVK---GTFGYLDPEYFQSSQFTEK-SDVYSFGVVLVELLTGQKPIRLVETEEN 165
Q K GT Y+ PE ++ K +DV+S GV L +L G P E +N
Sbjct: 172 QPKSAVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 80 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 135
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 136 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWTLCGTP 188
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 189 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 54.3 bits (129), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/161 (28%), Positives = 74/161 (45%), Gaps = 16/161 (9%)
Query: 3 LSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRL 56
L H NVV+L C ET++ LV+E + + L Y+ + E +P E
Sbjct: 68 LETFEHPNVVRLFDVCTVSRTDRETKL-TLVFEHV-DQDLTTYLDKVPEPGVPT--ETIK 123
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
+ ++ L +LHS + HRD+K NIL+ + K++DFG +R + T
Sbjct: 124 DMMFQLLRGLDFLHSHR---VVHRDLKPQNILVTSSGQIKLADFGLARIYSFQMA--LTS 178
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
V T Y PE S + D++S G + E+ +KP+
Sbjct: 179 VVVTLWYRAPEVLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSL-HQYIHEQTEDQLPITWEIRLGIAV 60
+L Q++H N++KL + LV E G L + I + ++ IR
Sbjct: 102 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----- 156
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQV 117
+V ++Y+H I HRD+K N+LL+ K + +I DFG S TH
Sbjct: 157 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASK 206
Query: 118 K-----GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
K GT Y+ PE + + EK DV+S GV+L LL+G P
Sbjct: 207 KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 250
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSL-HQYIHEQTEDQLPITWEIRLGIAV 60
+L Q++H N++KL + LV E G L + I + ++ IR
Sbjct: 103 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----- 157
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQV 117
+V ++Y+H I HRD+K N+LL+ K + +I DFG S TH
Sbjct: 158 QVLSGITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASK 207
Query: 118 K-----GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
K GT Y+ PE + + EK DV+S GV+L LL+G P
Sbjct: 208 KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 251
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++P G + ++ P R A +
Sbjct: 87 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEP---HARF-YAAQ 142
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 143 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 195
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 196 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 71 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 129
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 130 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 183
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 184 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 225
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 78/160 (48%), Gaps = 20/160 (12%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
++L +NH+N++ LL E + LV E + + +L Q IH + + +
Sbjct: 73 VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHE------- 124
Query: 55 RLG-IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHL 113
R+ + ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + + +
Sbjct: 125 RMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTASTN--FM 179
Query: 114 TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
T T Y PE + E D++S G ++ EL+ G
Sbjct: 180 MTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 100 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 158
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 159 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 212
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 213 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 254
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 76/168 (45%), Gaps = 28/168 (16%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLG 57
IL+ +H N+VKLL ++ EF G++ + E TE Q+ +
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV------- 139
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + AL+YLH I HRD+K+ NIL K++DFG S + T Q
Sbjct: 140 VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSA-----KNTRTIQR 191
Query: 118 K----GTFGYLDPEYF-----QSSQFTEKSDVYSFGVVLVELLTGQKP 156
+ GT ++ PE + + K+DV+S G+ L+E+ + P
Sbjct: 192 RDSFIGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 94 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 152
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 153 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 206
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 207 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 248
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 54.3 bits (129), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E+ P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+++D + K++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGLAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 76/165 (46%), Gaps = 25/165 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSL-HQYIHEQTEDQLPITWEIRLGIAV 60
+L Q++H N++KL + LV E G L + I + ++ IR
Sbjct: 85 LLKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----- 139
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQV 117
+V ++Y+H I HRD+K N+LL+ K + +I DFG S TH
Sbjct: 140 QVLSGITYMHKNK---IVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASK 189
Query: 118 K-----GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
K GT Y+ PE + + EK DV+S GV+L LL+G P
Sbjct: 190 KMKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 233
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 7/96 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSR--SMAVDRTHLTTQVKGTFG 122
L Y+HSA + HRD+K +N+L++ KI DFG +R D T T+ T
Sbjct: 156 GLKYIHSAN---VLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRW 212
Query: 123 YLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPI 157
Y PE +S+ +T+ D++S G +L E+L+ +PI
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLS-NRPI 247
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 54.3 bits (129), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 102 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 160
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 161 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 214
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 215 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 256
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 53.9 bits (128), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E+ P G + ++ P R A +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+++D + K++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/93 (33%), Positives = 46/93 (49%), Gaps = 4/93 (4%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
+ YLH+ I HRD+K N+ L+D KI DFG + + D T + GT Y+
Sbjct: 154 GVQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKT-LCGTPNYI 209
Query: 125 DPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
PE + + D++S G +L LL G+ P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 104 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 162
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 163 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 216
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 217 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 258
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E+ P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+++D + K++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/162 (31%), Positives = 84/162 (51%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLLGCCLET-----EVPL-LVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L + EV L LV +++P H + + LP+ + +
Sbjct: 145 IMRKLDHCNIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 203
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 204 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 257
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 258 NVSYICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 299
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 73/164 (44%), Gaps = 20/164 (12%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLG 57
IL+ +H N+VKLL ++ EF G++ + E TE Q+ +
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV------- 139
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + AL+YLH I HRD+K+ NIL K++DFG S +
Sbjct: 140 VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVS-AKNTRXIQRRDSF 195
Query: 118 KGTFGYLDPEYF-----QSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE + + K+DV+S G+ L+E+ + P
Sbjct: 196 IGTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E+ P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+++D + K++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T T Y PE + E D++S GV++ E++ G
Sbjct: 179 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 46/166 (27%), Positives = 75/166 (45%), Gaps = 24/166 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ----TEDQLPITWEIRLG 57
IL+ +H N+VKLL ++ EF G++ + E TE Q+ +
Sbjct: 87 ILASCDHPNIVKLLDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQV------- 139
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTS--RSMAVDRTHLTT 115
+ + AL+YLH I HRD+K+ NIL K++DFG S + + R
Sbjct: 140 VCKQTLDALNYLHDNK---IIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI 196
Query: 116 QVKGTFGYLDPEYF-----QSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE + + K+DV+S G+ L+E+ + P
Sbjct: 197 ---GTPYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPP 239
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 74/164 (45%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T T Y PE + E D++S GV++ E++ G
Sbjct: 179 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/153 (26%), Positives = 76/153 (49%), Gaps = 10/153 (6%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+E + + L +++ +P+ + +
Sbjct: 58 LLKELNHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPL--PLIKSYLFQ 114
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-RTHLTTQVKGT 120
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V RT+ V T
Sbjct: 115 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV--T 169
Query: 121 FGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 170 LWYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 202
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/162 (30%), Positives = 82/162 (50%), Gaps = 16/162 (9%)
Query: 2 ILSQINHRNVVKLL------GCCLETEVPLLVYEFIPNGSLHQYIH-EQTEDQLPITWEI 54
I+ +++H N+V+L G + LV +++P H + + LP+ + +
Sbjct: 66 IMRKLDHCNIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIY-V 124
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHL 113
+L + ++ +L+Y+HS I HRDIK N+LLD D K+ DFG+++ + R
Sbjct: 125 KLYM-YQLFRSLAYIHSFG---ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLV--RGEP 178
Query: 114 TTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
+ Y PE F ++ +T DV+S G VL ELL GQ
Sbjct: 179 NVSXICSRYYRAPELIFGATDYTSSIDVWSAGCVLAELLLGQ 220
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 23/166 (13%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV-EVSGA 65
HRNV++L+ E + LV+E + GS+ +IH++ E+ + V +V+ A
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN-----ELEASVVVQDVASA 123
Query: 66 LSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAV--DRTHLTTQ---- 116
L +LH+ I HRD+K NIL + + KI DFG + + D + ++T
Sbjct: 124 LDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLT 180
Query: 117 VKGTFGYLDPEYF-----QSSQFTEKSDVYSFGVVLVELLTGQKPI 157
G+ Y+ PE ++S + ++ D++S GV+L LL+G P
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/152 (25%), Positives = 74/152 (48%), Gaps = 8/152 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L ++NH N+VKLL LV+E + + L ++ +P+ + +
Sbjct: 54 LLKELNHPNIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPL--PLIKSYLFQ 110
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ L++ HS + HRD+K N+L++ + K++DFG +R+ V T +V T
Sbjct: 111 LLQGLAFCHSHR---VLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TL 166
Query: 122 GYLDPEYFQSSQFTEKS-DVYSFGVVLVELLT 152
Y PE ++ + D++S G + E++T
Sbjct: 167 WYRAPEILLGCKYYSTAVDIWSLGCIFAEMVT 198
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 93/222 (41%), Gaps = 36/222 (16%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYE-FIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGA 65
H V++LL E +LV E +P L YI E+ P+ +V A
Sbjct: 96 GHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKG----PLGEGPSRCFFGQVVAA 151
Query: 66 LSYLHSAASIPIYHRDIKSANILLDDKYR-AKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
+ + HS + HRDIK NIL+D + AK+ DFG S A+ T GT Y
Sbjct: 152 IQHCHSRG---VVHRDIKDENILIDLRRGCAKLIDFG---SGALLHDEPYTDFDGTRVYS 205
Query: 125 DPEYFQSSQFTE-KSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFE 183
PE+ Q+ + V+S G++L +++ G P R E
Sbjct: 206 PPEWISRHQYHALPATVWSLGILLYDMVCGDIPF---------------------ERDQE 244
Query: 184 VLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALE 225
+L+A++ A + +RCL RP+++E+ L+
Sbjct: 245 ILEAELHFPAHVSP--DCCALIRRCLAPKPSSRPSLEEILLD 284
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 71/164 (43%), Gaps = 22/164 (13%)
Query: 3 LSQINHRNVVKLLGCCLETEVP-----LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLG 57
L H NVV+L+ C + LV+E + + L Y+ + LP E
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA--ETIKD 116
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSR----SMAVDRTHL 113
+ + L +LH+ I HRD+K NIL+ K++DFG +R MA+D
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALD---- 169
Query: 114 TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
V T Y PE S + D++S G + E+ +KP+
Sbjct: 170 --PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
+ YLH+ I HRD+K N+ L+D KI DFG + + D + GT Y+
Sbjct: 138 GVQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKDLCGTPNYI 193
Query: 125 DPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
PE + + D++S G +L LL G+ P
Sbjct: 194 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 226
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 69/160 (43%), Gaps = 14/160 (8%)
Query: 3 LSQINHRNVVKLLGCCLETEVP-----LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLG 57
L H NVV+L+ C + LV+E + + L Y+ + LP E
Sbjct: 68 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA--ETIKD 124
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + L +LH+ I HRD+K NIL+ K++DFG +R + T V
Sbjct: 125 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMA--LTPV 179
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T Y PE S + D++S G + E+ +KP+
Sbjct: 180 VVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 83/194 (42%), Gaps = 22/194 (11%)
Query: 33 NGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDK 92
+ SL ++ + + I +I IAV + AL +LHS S+ HRD+K +N+L++
Sbjct: 116 DTSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLSV--IHRDVKPSNVLINAL 173
Query: 93 YRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEY----FQSSQFTEKSDVYSFGVVLV 148
+ K DFG S + D G Y PE ++ KSD++S G+ +
Sbjct: 174 GQVKXCDFGISGYLVDDVAKDID--AGCKPYXAPERINPELNQKGYSVKSDIWSLGITXI 231
Query: 149 ELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRC 208
EL + P S F Q+ ++ E Q+ + E + +C
Sbjct: 232 ELAILRFPY--------DSWGTPFQQL---KQVVEEPSPQLPADKFSAEFVD---FTSQC 277
Query: 209 LNLNGKKRPTMKEV 222
L N K+RPT E+
Sbjct: 278 LKKNSKERPTYPEL 291
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/186 (28%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 77 IYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQ 133
+ HRD+K N+LL K + K++DFG + + ++ GT GYL PE +
Sbjct: 142 VVHRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFG-FAGTPGYLSPEVLRKDP 200
Query: 134 FTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREA 193
+ + D+++ GV+L LL G P +E +++RL++ + A +
Sbjct: 201 YGKPVDLWACGVILYILLVGYPPF----WDE------------DQHRLYQQIKAGAY-DF 243
Query: 194 EKEEVITVAMVAK----RCLNLNGKKRPTMKEVALELAGI--RASIGASVLRQCEEIDFV 247
E TV AK + L +N KR T E AL+ I R+++ + + RQ E +D +
Sbjct: 244 PSPEWDTVTPEAKDLINKMLTINPSKRITAAE-ALKHPWISHRSTVASCMHRQ-ETVDCL 301
Query: 248 NYDNAR 253
NAR
Sbjct: 302 KKFNAR 307
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
+ YLH+ I HRD+K N+ L+D KI DFG + + D + GT Y+
Sbjct: 154 GVQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFD-GERKKDLCGTPNYI 209
Query: 125 DPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
PE + + D++S G +L LL G+ P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E+ P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+++D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGLAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3LLT|A Chain A, Crystal Structure Of Pf14_0431, Kinase Domain
Length = 360
Score = 52.8 bits (125), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/160 (28%), Positives = 68/160 (42%), Gaps = 24/160 (15%)
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAK----ISDFGTSRSMAVDRTHLTT 115
+E+ AL+YL + + H D+K NILLDD Y K + + + + RT T
Sbjct: 144 IEILKALNYLRKMS---LTHTDLKPENILLDDPYFEKSLITVRRVTDGKKIQIYRTKSTG 200
Query: 116 QVKGTFG-----------------YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
FG Y PE + + SD++SFG VL EL TG R
Sbjct: 201 IKLIDFGCATFKSDYHGSIINTRQYRAPEVILNLGWDVSSDMWSFGCVLAELYTGSLLFR 260
Query: 159 LVETEENRSLAAYFLQVINENRLFEVLDAQVLREAEKEEV 198
E E+ ++ +Q I +N L+E + K+E+
Sbjct: 261 THEHMEHLAMMESIIQPIPKNMLYEATKTNGSKYVNKDEL 300
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/93 (32%), Positives = 45/93 (48%), Gaps = 4/93 (4%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
+ YLH+ I HRD+K N+ L+D KI DFG + + D + GT Y+
Sbjct: 154 GVQYLHNNRVI---HRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGER-KKXLCGTPNYI 209
Query: 125 DPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
PE + + D++S G +L LL G+ P
Sbjct: 210 APEVLCKKGHSFEVDIWSLGCILYTLLVGKPPF 242
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N + KL + +V E+ P G + ++ P R A +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+++D + K++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 68 YLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPE 127
YLH I HRD+K N+ L++ KI DFG + + D T + GT Y+ PE
Sbjct: 132 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 187
Query: 128 YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
+ + DV+S G ++ LL G+ P
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N + KL + +V E+ P G + ++ P R A +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+++D + K++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E+ P G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+++D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 76/160 (47%), Gaps = 20/160 (12%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
++L +NH+N++ LL E + LV E + + +L Q IH + + +
Sbjct: 75 VLLKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVIHMELDHE------- 126
Query: 55 RLG-IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHL 113
R+ + ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 127 RMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTACTN--FM 181
Query: 114 TTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
T T Y PE + D++S G ++ EL+ G
Sbjct: 182 MTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 68 YLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPE 127
YLH I HRD+K N+ L++ KI DFG + + D T + GT Y+ PE
Sbjct: 132 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 187
Query: 128 YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
+ + DV+S G ++ LL G+ P
Sbjct: 188 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 217
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 68 YLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPE 127
YLH I HRD+K N+ L++ KI DFG + + D T + GT Y+ PE
Sbjct: 136 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKT-LCGTPNYIAPE 191
Query: 128 YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
+ + DV+S G ++ LL G+ P
Sbjct: 192 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 221
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/161 (31%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL-LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
+L +++H N++KL ET + LV E + G L I E+ E AV
Sbjct: 101 VLLRLSHPNIIKLKEI-FETPTEISLVLELVTGGELFDRIVEKGYYS-----ERDAADAV 154
Query: 61 -EVSGALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQ 116
++ A++YLH I HRD+K N+L KI+DFG S+ V+ L
Sbjct: 155 KQILEAVAYLHENG---IVHRDLKPENLLYATPAPDAPLKIADFGLSK--IVEHQVLMKT 209
Query: 117 VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
V GT GY PE + + + D++S G++ LL G +P
Sbjct: 210 VCGTPGYCAPEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N + KL + +V E+ P G + ++ P R A +
Sbjct: 95 ILQAVNFPFLTKLEFSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+++D + K++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLMIDQQGYIKVTDFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 39/78 (50%)
Query: 79 HRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFTEKS 138
HRD+K NIL+ A + DFG + + ++ GT Y PE F S T ++
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 139 DVYSFGVVLVELLTGQKP 156
D+Y+ VL E LTG P
Sbjct: 217 DIYALTCVLYECLTGSPP 234
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 84/166 (50%), Gaps = 23/166 (13%)
Query: 7 NHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV-EVSGA 65
HRNV++L+ E + LV+E + GS+ +IH++ E+ + V +V+ A
Sbjct: 69 GHRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFN-----ELEASVVVQDVASA 123
Query: 66 LSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDF--GTSRSMAVDRTHLTTQ---- 116
L +LH+ I HRD+K NIL + + KI DF G+ + D + ++T
Sbjct: 124 LDFLHNKG---IAHRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLT 180
Query: 117 VKGTFGYLDPEYF-----QSSQFTEKSDVYSFGVVLVELLTGQKPI 157
G+ Y+ PE ++S + ++ D++S GV+L LL+G P
Sbjct: 181 PCGSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLXGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLAGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 52.4 bits (124), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 54/114 (47%), Gaps = 25/114 (21%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAV---------------- 108
+ YLHS + HRD+K +NILL+ + K++DFG SRS
Sbjct: 121 VIKYLHSGG---LLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENT 177
Query: 109 ----DRTHLTTQVKGTFGYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
D + T T Y PE S+++T+ D++S G +L E+L G KPI
Sbjct: 178 ENFDDDQPILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI 230
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 52.0 bits (123), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T T Y PE + E D++S G ++ E++ G
Sbjct: 179 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 76 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQME 123
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 124 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT- 179
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T T Y PE + E D++S G ++ E++ G
Sbjct: 180 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I +N +VKL + +V E+ P G + ++ P R A +
Sbjct: 95 IQQAVNFPFLVKLEFSFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + K++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIKVADFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLGI 58
IL +I H N++ L +L+ E + G L ++ E+ TED+
Sbjct: 61 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-------QF 113
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLT 114
++ + YLHS I H D+K NI+L DK R K+ DFG + ++ +
Sbjct: 114 LKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK--IEAGNEF 168
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE 164
+ GT ++ PE ++D++S GV+ LL+G P L ET++
Sbjct: 169 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF-LGETKQ 217
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 67/156 (42%), Gaps = 10/156 (6%)
Query: 3 LSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEV 62
L H +++KL +V E++ G L YI + + + + ++
Sbjct: 70 LKLFRHPHIIKLYQVISTPSDIFMVMEYVSGGELFDYICKNGR----LDEKESRRLFQQI 125
Query: 63 SGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFG 122
+ Y H + HRD+K N+LLD AKI+DFG S M+ D L G+
Sbjct: 126 LSGVDYCHRHM---VVHRDLKPENVLLDAHMNAKIADFGLSNMMS-DGEFLRXSC-GSPN 180
Query: 123 YLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKPI 157
Y PE + + D++S GV+L LL G P
Sbjct: 181 YAAPEVISGRLYAGPEVDIWSSGVILYALLCGTLPF 216
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 3 LSQINHRNVVKLLGCCLETEVP-----LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLG 57
L H NVV+L+ C + LV+E + + L Y+ + LP E
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA--ETIKD 116
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + L +LH+ I HRD+K NIL+ K++DFG +R + V
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVV 173
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T Y PE S + D++S G + E+ +KP+
Sbjct: 174 --TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T T Y PE + E D++S G ++ E++ G
Sbjct: 179 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLGI 58
IL +I H N++ L +L+ E + G L ++ E+ TED+
Sbjct: 82 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-------QF 134
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLT 114
++ + YLHS I H D+K NI+L DK R K+ DFG + ++ +
Sbjct: 135 LKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK--IEAGNEF 189
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE 164
+ GT ++ PE ++D++S GV+ LL+G P L ET++
Sbjct: 190 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF-LGETKQ 238
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 52.0 bits (123), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T T Y PE + E D++S G ++ E++ G
Sbjct: 179 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 78/170 (45%), Gaps = 20/170 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLGI 58
IL +I H N++ L +L+ E + G L ++ E+ TED+
Sbjct: 68 ILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFLAEKESLTEDEAT-------QF 120
Query: 59 AVEVSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLT 114
++ + YLHS I H D+K NI+L DK R K+ DFG + ++ +
Sbjct: 121 LKQILDGVHYLHSKR---IAHFDLKPENIMLLDKNVPNPRIKLIDFGIAHK--IEAGNEF 175
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEE 164
+ GT ++ PE ++D++S GV+ LL+G P L ET++
Sbjct: 176 KNIFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASPF-LGETKQ 224
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKVVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLVGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T T Y PE + E D++S G ++ E++ G
Sbjct: 179 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDATLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T T Y PE + E D++S G ++ E++ G
Sbjct: 179 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLSQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T T Y PE + E D++S G ++ E++ G
Sbjct: 179 -SFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 72/156 (46%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 81 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 136
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D++ +++DFG ++ + T + GT
Sbjct: 137 IVLTFEYLHS---LDLIYRDLKPENLLIDEQGYIQVTDFGFAKRV----KGRTWXLCGTP 189
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 190 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 225
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 74/165 (44%), Gaps = 25/165 (15%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSL-HQYIHEQTEDQLPITWEIRLGIAV 60
+L Q++H N+ KL + LV E G L + I + ++ IR
Sbjct: 79 LLKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIR----- 133
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQV 117
+V ++Y H I HRD+K N+LL+ K + +I DFG S TH
Sbjct: 134 QVLSGITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLS-------THFEASK 183
Query: 118 K-----GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
K GT Y+ PE + + EK DV+S GV+L LL+G P
Sbjct: 184 KXKDKIGTAYYIAPEVLHGT-YDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 51.6 bits (122), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 73/164 (44%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T T Y PE + E D++S G ++ E++ G
Sbjct: 179 -SFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 20/171 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQT----EDQLPI-TWEIRL 56
+L +++H N+V L+ LV+EF+ L + + E + Q+ I +++
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
G+A + H I HRD+K N+L++ K++DFG +R+ + T +
Sbjct: 131 GVA--------HCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 117 VKGTFGYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENR 166
V T Y P+ S +++ D++S G + E++TG KP+ T++++
Sbjct: 180 VV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQ 228
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 170
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 171 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGATWTLCGTP 223
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/171 (25%), Positives = 84/171 (49%), Gaps = 20/171 (11%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQT----EDQLPI-TWEIRL 56
+L +++H N+V L+ LV+EF+ L + + E + Q+ I +++
Sbjct: 72 LLKELHHPNIVSLIDVIHSERCLTLVFEFM-EKDLKKVLDENKTGLQDSQIKIYLYQLLR 130
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQ 116
G+A + H I HRD+K N+L++ K++DFG +R+ + T +
Sbjct: 131 GVA--------HCHQHR---ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHE 179
Query: 117 VKGTFGYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENR 166
V T Y P+ S +++ D++S G + E++TG KP+ T++++
Sbjct: 180 VV-TLWYRAPDVLMGSKKYSTSVDIWSIGCIFAEMITG-KPLFPGVTDDDQ 228
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 68/160 (42%), Gaps = 14/160 (8%)
Query: 3 LSQINHRNVVKLLGCCLETEVP-----LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLG 57
L H NVV+L+ C + LV+E + + L Y+ + LP E
Sbjct: 60 LEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPA--ETIKD 116
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQV 117
+ + L +LH+ I HRD+K NIL+ K++DFG +R + V
Sbjct: 117 LMRQFLRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVV 173
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T Y PE S + D++S G + E+ +KP+
Sbjct: 174 --TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 76/171 (44%), Gaps = 23/171 (13%)
Query: 6 INHR-----NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
INHR N+V+ L +V E+ G L + I +ED E R
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED------EARFF 120
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDK--YRAKISDFGTSRSMAVDRTHLTT 115
+SG +SY H+ + + HRD+K N LLD R KI FG S+S + +T
Sbjct: 121 FQQLISG-VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSVLHSQPKST 176
Query: 116 QVKGTFGYLDPEYFQSSQFTEK-SDVYSFGVVLVELLTGQKPIRLVETEEN 165
GT Y+ PE ++ K +DV+S GV L +L G P E +N
Sbjct: 177 V--GTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI------QMELDHER 127
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 128 MSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMM 182
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 51.2 bits (121), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 95 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 150
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 151 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 203
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 204 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 43/148 (29%), Positives = 73/148 (49%), Gaps = 25/148 (16%)
Query: 26 LVYEFIPNGSLHQYIHEQTE-DQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKS 84
LV+E + GS+ +I +Q ++ + +R +V+ AL +LH+ I HRD+K
Sbjct: 88 LVFEKLQGGSILAHIQKQKHFNEREASRVVR-----DVAAALDFLHTKG---IAHRDLKP 139
Query: 85 ANILLDDKYRA---KISDFGTSRSMAVDRT-------HLTTQVKGTFGYLDPEYF----- 129
NIL + + KI DF M ++ + LTT G+ Y+ PE
Sbjct: 140 ENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC-GSAEYMAPEVVEVFTD 198
Query: 130 QSSQFTEKSDVYSFGVVLVELLTGQKPI 157
Q++ + ++ D++S GVVL +L+G P
Sbjct: 199 QATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/186 (27%), Positives = 88/186 (47%), Gaps = 29/186 (15%)
Query: 77 IYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQ 133
+ HR++K N+LL K + K++DFG + + ++ GT GYL PE +
Sbjct: 131 VVHRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQ-QAWFGFAGTPGYLSPEVLRKDP 189
Query: 134 FTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREA 193
+ + D+++ GV+L LL G P +E +++RL++ + A +
Sbjct: 190 YGKPVDLWACGVILYILLVGYPPF----WDE------------DQHRLYQQIKAGAY-DF 232
Query: 194 EKEEVITVAMVAK----RCLNLNGKKRPTMKEVALELAGI--RASIGASVLRQCEEIDFV 247
E TV AK + L +N KR T E AL+ I R+++ + + RQ E +D +
Sbjct: 233 PSPEWDTVTPEAKDLINKMLTINPSKRITAAE-ALKHPWISHRSTVASCMHRQ-ETVDCL 290
Query: 248 NYDNAR 253
NAR
Sbjct: 291 KKFNAR 296
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 40/163 (24%), Positives = 75/163 (46%), Gaps = 26/163 (15%)
Query: 6 INHRNVVKLLGCCLETEVP--LLVYEFIPNGSLHQYIHEQTE---DQLPITWEIRLGIAV 60
+H NV+ +LG C P L+ ++P GSL+ +HE T DQ + A+
Sbjct: 64 FSHPNVLPVLGACQSPPAPHPTLITHWMPYGSLYNVLHEGTNFVVDQ-----SQAVKFAL 118
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
+++ +++LH+ + I + S ++++D+ A+IS + + Q G
Sbjct: 119 DMARGMAFLHTLEPL-IPRHALNSRSVMIDEDMTARIS---------MADVKFSFQSPGR 168
Query: 121 F---GYLDPEYFQSSQ---FTEKSDVYSFGVVLVELLTGQKPI 157
++ PE Q +D++SF V+L EL+T + P
Sbjct: 169 MYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREVPF 211
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.8 bits (120), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 60/255 (23%), Positives = 107/255 (41%), Gaps = 32/255 (12%)
Query: 6 INHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGA 65
+ H N+V+L E LV++ + G L ED + + + +
Sbjct: 87 LKHPNIVRLHDSISEEGFHYLVFDLVTGGELF-------EDIVAREYYSEADASHCIHQI 139
Query: 66 LSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFG 122
L ++ I HRD+K N+LL K + K++DFG + + ++ GT G
Sbjct: 140 LESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGEQQAWFG-FAGTPG 198
Query: 123 YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
YL PE + + + D+++ GV+L LL G P +E ++++L+
Sbjct: 199 YLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPF----WDE------------DQHKLY 242
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLN----LNGKKRPTMKEVALELAGIRASIGASVL 238
+ + A + E TV AK +N +N KR T + + S AS++
Sbjct: 243 QQIKAGAY-DFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMM 301
Query: 239 RQCEEIDFVNYDNAR 253
+ E ++ + NAR
Sbjct: 302 HRQETVECLRKFNAR 316
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 115 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQ 170
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 171 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 223
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 224 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 56/174 (32%), Positives = 77/174 (44%), Gaps = 29/174 (16%)
Query: 6 INHR-----NVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLG 57
INHR N+V+ L +V E+ G L + I +ED E R
Sbjct: 67 INHRSLRHPNIVRFKEVILTPTHLAIVMEYASGGELFERICNAGRFSED------EARFF 120
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDK--YRAKISDFGTSRSMAVDRTHLTT 115
+SG +SY H+ + + HRD+K N LLD R KI FG S+S L +
Sbjct: 121 FQQLISG-VSYCHA---MQVCHRDLKLENTLLDGSPAPRLKICAFGYSKSSV-----LHS 171
Query: 116 QVKGTFG---YLDPEYFQSSQFTEK-SDVYSFGVVLVELLTGQKPIRLVETEEN 165
Q K T G Y+ PE ++ K +DV+S GV L +L G P E +N
Sbjct: 172 QPKDTVGTPAYIAPEVLLKKEYDGKVADVWSCGVTLYVMLVGAYPFEDPEEPKN 225
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI------QMELDHER 127
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMM 182
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 89 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFXEP---HARF-YAAQ 144
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 145 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 197
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 198 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 233
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 39/156 (25%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFAEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLT 114
I + A+ YLHS I I HRD+K N+L K K++DFG ++ LT
Sbjct: 121 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 176
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T + Y+ PE ++ + D++S GV++ LL G P
Sbjct: 177 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 218
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLT 114
I + A+ YLHS I I HRD+K N+L K K++DFG ++ LT
Sbjct: 127 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 182
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T + Y+ PE ++ + D++S GV++ LL G P
Sbjct: 183 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 224
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 50.8 bits (120), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLT 114
I + A+ YLHS I I HRD+K N+L K K++DFG ++ LT
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 175
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
T + Y+ PE ++ + D++S GV++ LL G P
Sbjct: 176 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLT 114
I + A+ YLHS I I HRD+K N+L K K++DFG ++ LT
Sbjct: 126 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 181
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T + Y+ PE ++ + D++S GV++ LL G P
Sbjct: 182 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 223
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 68 YLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPE 127
YLH I HRD+K N+ L++ KI DFG + + D + GT Y+ PE
Sbjct: 130 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 185
Query: 128 YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
+ + DV+S G ++ LL G+ P
Sbjct: 186 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 215
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKS 84
L+V E + G L I ++ + T I + A+ YLHS I I HRD+K
Sbjct: 135 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 189
Query: 85 ANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVY 141
N+L K K++DFG ++ LTT + Y+ PE ++ + D++
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 247
Query: 142 SFGVVLVELLTGQKP 156
S GV++ LL G P
Sbjct: 248 SLGVIMYILLCGYPP 262
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 62/135 (45%), Gaps = 10/135 (7%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKS 84
L+V E + G L I ++ + T I + A+ YLHS I I HRD+K
Sbjct: 141 LIVMECLDGGELFSRIQDRGDQAF--TEREASEIMKSIGEAIQYLHS---INIAHRDVKP 195
Query: 85 ANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVY 141
N+L K K++DFG ++ LTT + Y+ PE ++ + D++
Sbjct: 196 ENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDMW 253
Query: 142 SFGVVLVELLTGQKP 156
S GV++ LL G P
Sbjct: 254 SLGVIMYILLCGYPP 268
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLT 114
I + A+ YLHS I I HRD+K N+L K K++DFG ++ LT
Sbjct: 128 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 183
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T + Y+ PE ++ + D++S GV++ LL G P
Sbjct: 184 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 225
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLT 114
I + A+ YLHS I I HRD+K N+L K K++DFG ++ LT
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 177
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
T + Y+ PE ++ + D++S GV++ LL G P
Sbjct: 178 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/161 (26%), Positives = 71/161 (44%), Gaps = 18/161 (11%)
Query: 3 LSQINHRNVVKLLGCCLET----EVPLLVYEFIPNGSLHQYIHEQTEDQLPI--TWEIRL 56
L + H N+V+ T + +LV E +G+L Y+ ++ + +W
Sbjct: 79 LKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSW---- 134
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA-KISDFGTSRSMAVDRTHLTT 115
++ L +LH+ PI HRD+K NI + + KI D G + + R
Sbjct: 135 --CRQILKGLQFLHTRTP-PIIHRDLKCDNIFITGPTGSVKIGDLGLA---TLKRASFAK 188
Query: 116 QVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
V GT + PE ++ ++ E DVY+FG +E T + P
Sbjct: 189 AVIGTPEFXAPEXYEE-KYDESVDVYAFGXCXLEXATSEYP 228
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/103 (32%), Positives = 50/103 (48%), Gaps = 8/103 (7%)
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLT 114
I + A+ YLHS I I HRD+K N+L K K++DFG ++ LT
Sbjct: 136 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 191
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T + Y+ PE ++ + D++S GV++ LL G P
Sbjct: 192 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPPF 233
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 50/112 (44%), Gaps = 10/112 (8%)
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
E+ A+ +H + HRDIK NILLD +++DFG+ + D T + GT
Sbjct: 170 EIVMAIDSVHRLGYV---HRDIKPDNILLDRCGHIRLADFGSCLKLRADGTVRSLVAVGT 226
Query: 121 FGYLDPEYFQS-------SQFTEKSDVYSFGVVLVELLTGQKPIRLVETEEN 165
YL PE Q+ + + D ++ GV E+ GQ P T E
Sbjct: 227 PDYLSPEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYADSTAET 278
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLT 114
I + A+ YLHS I I HRD+K N+L K K++DFG ++ LT
Sbjct: 122 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLT 177
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
T + Y+ PE ++ + D++S GV++ LL G P
Sbjct: 178 TPCYTPY-YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 68 YLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPE 127
YLH I HRD+K N+ L++ KI DFG + + D + GT Y+ PE
Sbjct: 154 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 209
Query: 128 YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
+ + DV+S G ++ LL G+ P
Sbjct: 210 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 239
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 43/90 (47%), Gaps = 4/90 (4%)
Query: 68 YLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPE 127
YLH I HRD+K N+ L++ KI DFG + + D + GT Y+ PE
Sbjct: 156 YLHRNRVI---HRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKV-LCGTPNYIAPE 211
Query: 128 YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
+ + DV+S G ++ LL G+ P
Sbjct: 212 VLSKKGHSFEVDVWSIGCIMYTLLVGKPPF 241
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/164 (25%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 77 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQME 124
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 125 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT- 180
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTG 153
+ + T Y PE + E D++S G ++ E++ G
Sbjct: 181 -SFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
L Y+HSA I HRD+K +N+ +++ KI DFG +R A + T T Y
Sbjct: 144 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYR 196
Query: 125 DPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
PE + + D++S G ++ ELLTG+
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
L Y+HSA I HRD+K +N+ +++ KI DFG +R A + T T Y
Sbjct: 144 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYR 196
Query: 125 DPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
PE + + D++S G ++ ELLTG+
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
L Y+HSA I HRD+K +N+ +++ KI DFG +R A + T T Y
Sbjct: 144 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYV----ATRWYR 196
Query: 125 DPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
PE + + D++S G ++ ELLTG+
Sbjct: 197 APEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 49/167 (29%), Positives = 73/167 (43%), Gaps = 23/167 (13%)
Query: 33 NGSLHQYIHEQTEDQLPITWEIRL--GIAVEVSGALSYLHSAASIPIYHRDIKSANILL- 89
NGS+H + + L +L I ++ AL YLH+ I HRDIK N L
Sbjct: 151 NGSIHGF-----RESLDFVQREKLISNIMRQIFSALHYLHNQG---ICHRDIKPENFLFS 202
Query: 90 -DDKYRAKISDFGTSR---SMAVDRTHLTTQVKGTFGYLDPEYFQSSQ--FTEKSDVYSF 143
+ + K+ DFG S+ + + T GT ++ PE ++ + K D +S
Sbjct: 203 TNKSFEIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPYFVAPEVLNTTNESYGPKCDAWSA 262
Query: 144 GVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVL 190
GV+L LL G P V + S QV+N+ FE + VL
Sbjct: 263 GVLLHLLLMGAVPFPGVNDADTIS------QVLNKKLCFENPNYNVL 303
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQVKGTF 121
A+ YLH I HRD+K N+LL + KI+DFG S+ + T L + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 122 GYLDPEYFQS---SQFTEKSDVYSFGVVLVELLTGQKP 156
YL PE S + + D +S GV+L L+G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 68 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI------QMELDHER 120
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 121 MSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMM 175
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 50.1 bits (118), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLXQVI------QMELDHER 127
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 128 MSYLLYQMLXGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMM 182
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQVKGTF 121
A+ YLH I HRD+K N+LL + KI+DFG S+ + T L + GT
Sbjct: 132 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 186
Query: 122 GYLDPEYFQS---SQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D +S GV+L L+G P
Sbjct: 187 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 225
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQVKGTF 121
A+ YLH I HRD+K N+LL + KI+DFG S+ + T L + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 122 GYLDPEYFQS---SQFTEKSDVYSFGVVLVELLTGQKP 156
YL PE S + + D +S GV+L L+G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 116/238 (48%), Gaps = 39/238 (16%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H+++V G C+ + +LV EF+ GSL Y+ ++ ++ + I W +L +A +
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYL-KKNKNCINILW--KLEVAKQ 121
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILL---DDKYRA-----KISDFGTSRSMAVDRTHL 113
++ A+ +L I H ++ + NILL +D+ K+SD G S ++ + + L
Sbjct: 122 LAAAMHFLEENTLI---HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV-LPKDIL 177
Query: 114 TTQVKGTFGYLDPEYFQSSQ-FTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAY 171
++ ++ PE ++ + +D +SFG L E+ + G KP+ ++++ R L Y
Sbjct: 178 QERIP----WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ--RKLQFY 231
Query: 172 FLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
E+R + + +A + C++ RP+ + + +L +
Sbjct: 232 ------EDR----------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQVKGTF 121
A+ YLH I HRD+K N+LL + KI+DFG S+ + T L + GT
Sbjct: 126 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 180
Query: 122 GYLDPEYFQS---SQFTEKSDVYSFGVVLVELLTGQKP 156
YL PE S + + D +S GV+L L+G P
Sbjct: 181 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 48/98 (48%), Gaps = 11/98 (11%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQVKGTF 121
A+ YLH I HRD+K N+LL + KI+DFG S+ + T L + GT
Sbjct: 125 AVQYLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRTLCGTP 179
Query: 122 GYLDPEYFQS---SQFTEKSDVYSFGVVLVELLTGQKP 156
YL PE S + + D +S GV+L L+G P
Sbjct: 180 TYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 217
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 75 VLMKXVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 127
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDXTLKILDFGLARTAGT--SFMM 182
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 76/163 (46%), Gaps = 15/163 (9%)
Query: 2 ILSQINHRNVVKLLGCCL--ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIA 59
+L ++ H+NV++L+ E + +V E+ G + + + E + P+ G
Sbjct: 59 LLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCG-MQEMLDSVPEKRFPVCQA--HGYF 115
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQ 116
++ L YLHS I H+DIK N+LL KIS G + ++ A D T T+Q
Sbjct: 116 CQLIDGLEYLHSQG---IVHKDIKPGNLLLTTGGTLKISALGVAEALHPFAADDTCRTSQ 172
Query: 117 VKGTFGYLDPEYFQS-SQFTE-KSDVYSFGVVLVELLTGQKPI 157
G+ + PE F+ K D++S GV L + TG P
Sbjct: 173 --GSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPF 213
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ ++ G P
Sbjct: 203 EYLAPEIILSKGYNKAVDWWALGVLIYQMAAGYPPF 238
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 71/156 (45%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+++D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLIIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL PE S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPEIIISKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 51/92 (55%), Gaps = 7/92 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRA-KISDFGTSRSMAVDRTHLTTQVKGTFGY 123
+L+Y+HS I I HRDIK N+LLD K+ DFG+++ + +++ Y
Sbjct: 153 SLAYIHS---IGICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--Y 207
Query: 124 LDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
PE F ++ +T D++S G V+ EL+ GQ
Sbjct: 208 RAPELIFGATNYTTNIDIWSTGCVMAELMQGQ 239
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGIA 59
IL ++NH ++K+ + E +V E + G L + +++ ++ + ++ +A
Sbjct: 207 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 265
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQ 116
V+ YLH I HRD+K N+LL + KI+DFG S+ + T L
Sbjct: 266 VQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRT 314
Query: 117 VKGTFGYLDPEYFQS---SQFTEKSDVYSFGVVLVELLTGQKPI 157
+ GT YL PE S + + D +S GV+L L+G P
Sbjct: 315 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 358
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/166 (26%), Positives = 71/166 (42%), Gaps = 31/166 (18%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIH-------EQTEDQ----LP 49
++L + H NV+ LL F P SL + QT+ Q L
Sbjct: 75 LLLKHMQHENVIGLLDV------------FTPASSLRNFYDFYLVMPFMQTDLQKIMGLK 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ L Y+HSA + HRD+K N+ +++ KI DFG +R +
Sbjct: 123 FSEEKIQYLVYQMLKGLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAE 179
Query: 110 RTHLTTQVKGTFGYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTGQ 154
T T Y PE S + + D++S G ++ E+LTG+
Sbjct: 180 MTGYVV----TRWYRAPEVILSWMHYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/164 (28%), Positives = 77/164 (46%), Gaps = 20/164 (12%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYI--HEQTEDQLPITWEIRLGIA 59
IL ++NH ++K+ + E +V E + G L + +++ ++ + ++ +A
Sbjct: 193 ILKKLNHPCIIKIKNF-FDAEDYYIVLELMEGGELFDKVVGNKRLKEATCKLYFYQMLLA 251
Query: 60 VEVSGALSYLHSAASIPIYHRDIKSANILLDDKYR---AKISDFGTSRSMAVDRTHLTTQ 116
V+ YLH I HRD+K N+LL + KI+DFG S+ + T L
Sbjct: 252 VQ------YLHENG---IIHRDLKPENVLLSSQEEDCLIKITDFGHSKILG--ETSLMRT 300
Query: 117 VKGTFGYLDPEYFQS---SQFTEKSDVYSFGVVLVELLTGQKPI 157
+ GT YL PE S + + D +S GV+L L+G P
Sbjct: 301 LCGTPTYLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPF 344
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 44/151 (29%), Positives = 72/151 (47%), Gaps = 9/151 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L +++H N++ LL LV++F+ L I + + P I+ + +
Sbjct: 65 LLQELSHPNIIGLLDAFGHKSNISLVFDFM-ETDLEVIIKDNSLVLTPS--HIKAYMLMT 121
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ G L YLH I HRD+K N+LLD+ K++DFG ++S QV T
Sbjct: 122 LQG-LEYLHQHW---ILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TR 176
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELL 151
Y PE F + + D+++ G +L ELL
Sbjct: 177 WYRAPELLFGARMYGVGVDMWAVGCILAELL 207
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNAMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR----L 56
+ + ++ +V L G E + E + GSL Q I Q+ E R L
Sbjct: 116 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYL 170
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVD---RTH 112
G A+E L YLH+ I H D+K+ N+LL D RA + DFG + + D ++
Sbjct: 171 GQALE---GLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 224
Query: 113 LTTQ-VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
LT + GT ++ PE K D++S +++ +L G P
Sbjct: 225 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR----L 56
+ + ++ +V L G E + E + GSL Q I Q+ E R L
Sbjct: 118 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYL 172
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVD---RTH 112
G A+E L YLH+ I H D+K+ N+LL D RA + DFG + + D ++
Sbjct: 173 GQALE---GLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 226
Query: 113 LTTQ-VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
LT + GT ++ PE K D++S +++ +L G P
Sbjct: 227 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/238 (22%), Positives = 115/238 (48%), Gaps = 39/238 (16%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
++S+++H+++V G C + +LV EF+ GSL Y+ ++ ++ + I W +L +A +
Sbjct: 65 MMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILW--KLEVAKQ 121
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILL---DDKYRA-----KISDFGTSRSMAVDRTHL 113
++ A+ +L I H ++ + NILL +D+ K+SD G S ++ + + L
Sbjct: 122 LAWAMHFLEENTLI---HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITV-LPKDIL 177
Query: 114 TTQVKGTFGYLDPEYFQSSQ-FTEKSDVYSFGVVLVELLT-GQKPIRLVETEENRSLAAY 171
++ ++ PE ++ + +D +SFG L E+ + G KP+ ++++ R L Y
Sbjct: 178 QERIP----WVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQ--RKLQFY 231
Query: 172 FLQVINENRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
E+R + + +A + C++ RP+ + + +L +
Sbjct: 232 ------EDR----------HQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDLNSL 273
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ A+ Y H I HRD+K N+LLD+ KI+DFG S M D L T G+
Sbjct: 111 QIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC-GS 165
Query: 121 FGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKP 156
Y PE + + DV+S GV+L +L + P
Sbjct: 166 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 47/165 (28%), Positives = 74/165 (44%), Gaps = 20/165 (12%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIR----L 56
+ + ++ +V L G E + E + GSL Q I Q+ E R L
Sbjct: 102 VACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSLGQLI-----KQMGCLPEDRALYYL 156
Query: 57 GIAVEVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVD---RTH 112
G A+E L YLH+ I H D+K+ N+LL D RA + DFG + + D ++
Sbjct: 157 GQALE---GLEYLHTRR---ILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSL 210
Query: 113 LTTQ-VKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
LT + GT ++ PE K D++S +++ +L G P
Sbjct: 211 LTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 70/154 (45%), Gaps = 18/154 (11%)
Query: 11 VVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLGIAVEVSGALS 67
+V L G E + E + GSL Q + EQ ED+ LG A+E L
Sbjct: 147 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRA----LYYLGQALE---GLE 199
Query: 68 YLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVD---RTHLTTQ-VKGTFG 122
YLHS I H D+K+ N+LL D A + DFG + + D ++ LT + GT
Sbjct: 200 YLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTET 256
Query: 123 YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE K DV+S +++ +L G P
Sbjct: 257 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ A+ Y H I HRD+K N+LLD+ KI+DFG S M D L T G+
Sbjct: 115 QIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC-GS 169
Query: 121 FGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKP 156
Y PE + + DV+S GV+L +L + P
Sbjct: 170 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 21/140 (15%)
Query: 26 LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH----SAASIP-IYHR 80
L+ ++ NGSL+ Y+ T D + L +A L +LH S P I HR
Sbjct: 112 LITDYHENGSLYDYLKSTTLDAKSM-----LKLAYSSVSGLCHLHTEIFSTQGKPAIAHR 166
Query: 81 DIKSANILLDDKYRAKISDFGTSRSMAVDRTHL----TTQVKGTFGYLDPEYFQSS---- 132
D+KS NIL+ I+D G + D + T+V GT Y+ PE S
Sbjct: 167 DLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRYMPPEVLDESLNRN 225
Query: 133 --QFTEKSDVYSFGVVLVEL 150
Q +D+YSFG++L E+
Sbjct: 226 HFQSYIMADMYSFGLILWEV 245
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ A+ Y H I HRD+K N+LLD+ KI+DFG S M D L T G+
Sbjct: 121 QIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC-GS 175
Query: 121 FGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKP 156
Y PE + + DV+S GV+L +L + P
Sbjct: 176 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 72/162 (44%), Gaps = 16/162 (9%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAV 60
I+L H N++ L + + +V E + G L I Q + R AV
Sbjct: 68 ILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQK------FFSEREASAV 121
Query: 61 --EVSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLT 114
++ + YLH+ + HRD+K +NIL D+ +I DFG ++ + + L
Sbjct: 122 LFTITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
T T ++ PE + + D++S GV+L +LTG P
Sbjct: 179 TPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRA----KISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + HRD+K +NIL D+ +I DFG ++ + + L T
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T ++ PE + + E D++S G++L +L G P
Sbjct: 187 Y-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 48/97 (49%), Gaps = 6/97 (6%)
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ A+ Y H I HRD+K N+LLD+ KI+DFG S M D L T G+
Sbjct: 120 QIISAVEYCHRHK---IVHRDLKPENLLLDEHLNVKIADFGLSNIMT-DGNFLKTSC-GS 174
Query: 121 FGYLDPEYFQSSQFT-EKSDVYSFGVVLVELLTGQKP 156
Y PE + + DV+S GV+L +L + P
Sbjct: 175 PNYAAPEVISGKLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 69 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQME 116
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 117 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT- 172
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
+ + T T Y PE + E D++S G ++ E++
Sbjct: 173 -SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 213
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 148 GLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATR 197
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 142 GLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATR 191
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 48.9 bits (115), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 142 GLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATR 191
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL ++ H N+VKL + +LV+E + + L + + +T + L ++
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFL---LQ 108
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ ++Y H + HRD+K N+L++ + KI+DFG +R+ + T +V T
Sbjct: 109 LLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TL 164
Query: 122 GYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTG 153
Y P+ S +++ D++S G + E++ G
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/162 (25%), Positives = 72/162 (44%), Gaps = 28/162 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 80 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQME 127
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 128 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT- 183
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
+ + T T Y PE + E D++S G ++ E++
Sbjct: 184 -SFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 224
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 49/100 (49%), Gaps = 8/100 (8%)
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRA----KISDFGTSRSMAVDRTHLTTQV 117
+ + YLHS + HRD+K +NIL D+ +I DFG ++ + + L T
Sbjct: 130 IGKTVEYLHSQG---VVHRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPC 186
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T ++ PE + + E D++S G++L +L G P
Sbjct: 187 Y-TANFVAPEVLKRQGYDEGCDIWSLGILLYTMLAGYTPF 225
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDXELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 69 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 121
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 122 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMM 176
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/153 (24%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL ++ H N+VKL + +LV+E + + L + + +T + L ++
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFL---LQ 108
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ ++Y H + HRD+K N+L++ + KI+DFG +R+ + T +V T
Sbjct: 109 LLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TL 164
Query: 122 GYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTG 153
Y P+ S +++ D++S G + E++ G
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 69 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 121
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 122 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMM 176
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 177 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 213
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 76 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 128
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 129 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMM 183
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 127
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMM 182
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 74 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 126
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 127 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMM 181
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 182 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 143 GLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGYVATR 192
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
YL P S + + D ++ GV++ E+ G P
Sbjct: 203 EYLAPAIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 68 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 120
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 121 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMM 175
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 176 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 75 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 127
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 128 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMM 182
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 183 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 8/91 (8%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
L Y+HSA + HRD+K N+ +++ KI DFG +R + T T Y
Sbjct: 156 GLKYIHSAG---VVHRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVV----TRWYR 208
Query: 125 DPEYFQSS-QFTEKSDVYSFGVVLVELLTGQ 154
PE S + + D++S G ++ E+LTG+
Sbjct: 209 APEVILSWMHYNQTVDIWSVGCIMAEMLTGK 239
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 139 GLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLAR-------HTDDEMTGYVATR 188
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 76 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 128
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 129 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMM 183
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 184 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 122 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 175
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 176 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQRVS----- 228
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 229 ----------SECQHLI------RWCLALRPSDRPTFEEI 252
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 157 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATR 206
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 48.5 bits (114), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 165
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 166 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMM 220
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/157 (26%), Positives = 74/157 (47%), Gaps = 18/157 (11%)
Query: 1 IILSQINHRNVVKLLGCCL------ETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEI 54
+++ +NH+N++ LL E + LV E + + +L Q I Q+ + E
Sbjct: 113 VLMKCVNHKNIISLLNVFTPQKTLEEFQDVYLVMELM-DANLCQVI------QMELDHER 165
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ + +LHSA I HRD+K +NI++ KI DFG +R+ + +
Sbjct: 166 MSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT--SFMM 220
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
T T Y PE + E D++S G ++ E++
Sbjct: 221 TPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 257
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 7/159 (4%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
I + H ++V+LL + +V+EF+ L I ++ + + + +
Sbjct: 79 ICHMLKHPHIVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQ 138
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVK 118
+ AL Y H I HRD+K N+LL K + K+ DFG + + +V
Sbjct: 139 ILEALRYCHDNN---IIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV- 194
Query: 119 GTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
GT ++ PE + + + DV+ GV+L LL+G P
Sbjct: 195 GTPHFMAPEVVKREPYGKPVDVWGCGVILFILLSGCLPF 233
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 50/102 (49%), Gaps = 8/102 (7%)
Query: 58 IAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRA---KISDFGTSRSMAVDRTHLT 114
I + A+ YLHS I I HRD+K N+L K K++DFG ++ +
Sbjct: 120 IMKSIGEAIQYLHS---INIAHRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNS--L 174
Query: 115 TQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
T+ T Y+ PE ++ + D++S GV++ LL G P
Sbjct: 175 TEPCYTPYYVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ +E
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQRVS---------------SE 263
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 264 CQHLI------RWCLALRPSDRPTFEEI 285
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 160 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 209
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 143 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 192
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 48/154 (31%), Positives = 69/154 (44%), Gaps = 18/154 (11%)
Query: 11 VVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQ---TEDQLPITWEIRLGIAVEVSGALS 67
+V L G E + E + GSL Q + EQ ED+ LG A+E L
Sbjct: 128 IVPLYGAVREGPWVNIFMELLEGGSLGQLVKEQGCLPEDRA----LYYLGQALE---GLE 180
Query: 68 YLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVD---RTHLTTQ-VKGTFG 122
YLHS I H D+K+ N+LL D A + DFG + + D + LT + GT
Sbjct: 181 YLHSRR---ILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTET 237
Query: 123 YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
++ PE K DV+S +++ +L G P
Sbjct: 238 HMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 157 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 206
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGXVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 50/94 (53%), Gaps = 7/94 (7%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKG--TF 121
L Y+HSA + HRD+K AN+ ++ + KI DFG +R M +H +G T
Sbjct: 132 GLKYIHSAN---VLHRDLKPANLFINTEDLVLKIGDFGLARIMDPHYSHKGHLSEGLVTK 188
Query: 122 GYLDPEYFQS-SQFTEKSDVYSFGVVLVELLTGQ 154
Y P S + +T+ D+++ G + E+LTG+
Sbjct: 189 WYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGK 222
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 147 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 196
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 197 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 230
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 157 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 206
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 207 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 149 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 198
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ +E
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQRVS---------------SE 262
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 263 CQHLI------RWCLALRPSDRPTFEEI 284
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 149 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 198
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 142 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 191
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 136 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 185
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 186 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 219
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 139 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 188
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 144 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 193
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 194 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 227
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 156 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 205
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 68/143 (47%), Gaps = 25/143 (17%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH-----SAASIPIYH 79
L+ + +GSL+ ++ QT + + L +AV + L++LH + I H
Sbjct: 82 WLITHYHEHGSLYDFLQRQTLEP-----HLALRLAVSAACGLAHLHVEIFGTQGKPAIAH 136
Query: 80 RDIKSANILLDDKYRAKISDFGTS--RSMAVDRTHLTTQVK-GTFGYLDPEY-------- 128
RD KS N+L+ + I+D G + S D + + GT Y+ PE
Sbjct: 137 RDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTKRYMAPEVLDEQIRTD 196
Query: 129 -FQSSQFTEKSDVYSFGVVLVEL 150
F+S ++T D+++FG+VL E+
Sbjct: 197 CFESYKWT---DIWAFGLVLWEI 216
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 149 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 198
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 199 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 232
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 156 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 205
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 206 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 239
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 139 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 188
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 134 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 183
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 148 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 197
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 198 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 231
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 40/135 (29%), Positives = 60/135 (44%), Gaps = 10/135 (7%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKS 84
L+V E + G L I ++ + T I + A+ YLHS I I HRD+K
Sbjct: 135 LIVXECLDGGELFSRIQDRGDQAF--TEREASEIXKSIGEAIQYLHS---INIAHRDVKP 189
Query: 85 ANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVY 141
N+L K K++DFG ++ LTT + Y+ PE ++ + D +
Sbjct: 190 ENLLYTSKRPNAILKLTDFGFAKE-TTSHNSLTTPCYTPY-YVAPEVLGPEKYDKSCDXW 247
Query: 142 SFGVVLVELLTGQKP 156
S GV+ LL G P
Sbjct: 248 SLGVIXYILLCGYPP 262
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 37/153 (24%), Positives = 75/153 (49%), Gaps = 9/153 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL ++ H N+VKL + +LV+E + + L + + +T + L ++
Sbjct: 53 ILKELKHSNIVKLYDVIHTKKRLVLVFEHL-DQDLKKLLDVCEGGLESVTAKSFL---LQ 108
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ ++Y H + HRD+K N+L++ + KI+DFG +R+ + T ++ T
Sbjct: 109 LLNGIAYCHDRR---VLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TL 164
Query: 122 GYLDPEYFQSS-QFTEKSDVYSFGVVLVELLTG 153
Y P+ S +++ D++S G + E++ G
Sbjct: 165 WYRAPDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 134 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 183
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 184 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 133 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 182
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ +E
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQRVS---------------SE 263
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 264 CQHLI------RWCLALRPSDRPTFEEI 285
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ +E
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQRVS---------------SE 262
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 263 CQHLI------RWCLALRPSDRPTFEEI 284
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 133 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMAGFVATR 182
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 142 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 191
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 192 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 225
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 139 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 188
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 189 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 135 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 184
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 185 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 218
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 48.1 bits (113), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 133 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 182
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 133 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 182
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 183 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 143 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 192
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 160 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATR 209
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 210 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 143 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 192
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 193 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 226
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 31/164 (18%)
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+V A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T G
Sbjct: 121 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDG 174
Query: 120 TFGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINE 178
T Y PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 175 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS- 231
Query: 179 NRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 232 --------------SECQHLI------RWCLALRPSDRPTFEEI 255
>pdb|4ALU|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 76/164 (46%), Gaps = 31/164 (18%)
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+V A+ + H+ + HRDIK NIL+D ++ K+ DFG+ A+ + + T G
Sbjct: 165 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDG 218
Query: 120 TFGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINE 178
T Y PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 219 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS- 275
Query: 179 NRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 276 --------------SECQHLI------RWCLALRPSDRPTFEEI 299
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 48.1 bits (113), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 44/164 (26%), Positives = 76/164 (46%), Gaps = 31/164 (18%)
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+V A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T G
Sbjct: 118 QVLEAVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDG 171
Query: 120 TFGYLDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINE 178
T Y PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 172 TRVYSPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS- 228
Query: 179 NRLFEVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 229 --------------SECQHLI------RWCLALRPSDRPTFEEI 252
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 42/232 (18%)
Query: 26 LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH-----SAASIPIYHR 80
L+ + GSL+ Y+ T D + L I + ++ L++LH + I HR
Sbjct: 83 LITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 81 DIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK-------GTFGYLDPEYFQSS- 132
D+KS NIL+ + I+D G +AV + T Q+ GT Y+ PE +
Sbjct: 138 DLKSKNILVKKNGQCCIADLG----LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 133 -----QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDA 187
++ D+++FG+VL E+ R+V F V+ + FE +
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEVAR-----RMVSNGIVEDYKPPFYDVVPNDPSFEDMRK 248
Query: 188 QVLREAEKEEV----------ITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
V + ++ + ++A + K C N R T + L I
Sbjct: 249 VVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/154 (24%), Positives = 77/154 (50%), Gaps = 9/154 (5%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+L + H N+V L + LV+E++ + L QY+ + + ++L +
Sbjct: 53 LLKDLKHANIVTLHDIIHTEKSLTLVFEYL-DKDLKQYLDDC--GNIINMHNVKLFLFQL 109
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ G L+Y H + HRD+K N+L++++ K++DFG +R+ ++ +V T
Sbjct: 110 LRG-LAYCHRQK---VLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TL 164
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y P+ S+ ++ + D++ G + E+ TG+
Sbjct: 165 WYRPPDILLGSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 35/190 (18%)
Query: 77 IYHRDIKSANILLDDKYRA--KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQF 134
I H D+K NILL + R+ K+ DFG+S + + T ++ F Y PE +++
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRF-YRAPEVILGARY 276
Query: 135 TEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
D++S G +L ELLTG L+ E+ A ++++ + +Q L +A
Sbjct: 277 GMPIDMWSLGCILAELLTGYP---LLPGEDEGDQLACMIELLG-------MPSQKLLDAS 326
Query: 195 KE-----------EVITVAMVAKRCLNLNGKKR--------PTMKEVALELAGIRASIGA 235
K TV ++ + LNG + P +E L G +
Sbjct: 327 KRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL 386
Query: 236 SVLRQCEEID 245
L+QC E D
Sbjct: 387 DFLKQCLEWD 396
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 42/232 (18%)
Query: 26 LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH-----SAASIPIYHR 80
L+ + GSL+ Y+ T D + L I + ++ L++LH + I HR
Sbjct: 83 LITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFGTQGKPAIAHR 137
Query: 81 DIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK-------GTFGYLDPEYFQSS- 132
D+KS NIL+ + I+D G +AV + T Q+ GT Y+ PE +
Sbjct: 138 DLKSKNILVKKNGQCCIADLG----LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 193
Query: 133 -----QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDA 187
++ D+++FG+VL E+ R+V F V+ + FE +
Sbjct: 194 QVDCFDSYKRVDIWAFGLVLWEVAR-----RMVSNGIVEDYKPPFYDVVPNDPSFEDMRK 248
Query: 188 QVLREAEKEEV----------ITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
V + ++ + ++A + K C N R T + L I
Sbjct: 249 VVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 300
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 54/232 (23%), Positives = 93/232 (40%), Gaps = 42/232 (18%)
Query: 26 LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH-----SAASIPIYHR 80
L+ + GSL+ Y+ T D + L I + ++ L++LH + I HR
Sbjct: 112 LITHYHEMGSLYDYLQLTTLDTVSC-----LRIVLSIASGLAHLHIEIFGTQGKPAIAHR 166
Query: 81 DIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK-------GTFGYLDPEYFQSS- 132
D+KS NIL+ + I+D G +AV + T Q+ GT Y+ PE +
Sbjct: 167 DLKSKNILVKKNGQCCIADLG----LAVMHSQSTNQLDVGNNPRVGTKRYMAPEVLDETI 222
Query: 133 -----QFTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDA 187
++ D+++FG+VL E+ R+V F V+ + FE +
Sbjct: 223 QVDCFDSYKRVDIWAFGLVLWEVAR-----RMVSNGIVEDYKPPFYDVVPNDPSFEDMRK 277
Query: 188 QVLREAEKEEV----------ITVAMVAKRCLNLNGKKRPTMKEVALELAGI 229
V + ++ + ++A + K C N R T + L I
Sbjct: 278 VVCVDQQRPNIPNRWFSDPTLTSLAKLMKECWYQNPSARLTALRIKKTLTKI 329
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 47.8 bits (112), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 161 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 214
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 215 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 267
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 268 ----------SECQHLI------RWCLALRPSDRPTFEEI 291
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 49/190 (25%), Positives = 80/190 (42%), Gaps = 35/190 (18%)
Query: 77 IYHRDIKSANILLDDKYRA--KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQF 134
I H D+K NILL + R+ K+ DFG+S + + T ++ F Y PE +++
Sbjct: 221 IIHCDLKPENILLKQQGRSGIKVIDFGSS---CYEHQRVYTXIQSRF-YRAPEVILGARY 276
Query: 135 TEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
D++S G +L ELLTG L+ E+ A ++++ + +Q L +A
Sbjct: 277 GMPIDMWSLGCILAELLTGYP---LLPGEDEGDQLACMIELLG-------MPSQKLLDAS 326
Query: 195 KE-----------EVITVAMVAKRCLNLNGKKR--------PTMKEVALELAGIRASIGA 235
K TV ++ + LNG + P +E L G +
Sbjct: 327 KRAKNFVSXKGYPRYCTVTTLSDGSVVLNGGRSRRGKLRGPPESREWGNALKGCDDPLFL 386
Query: 236 SVLRQCEEID 245
L+QC E D
Sbjct: 387 DFLKQCLEWD 396
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ +E
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS---------------SE 262
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 263 CQHLI------RWCLALRPSDRPTFEEI 284
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 69/148 (46%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ +E
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS---------------SE 277
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 278 CQHLI------RWCLALRPSDRPTFEEI 299
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 69/148 (46%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG+ A+ + + T GT Y PE+ + ++
Sbjct: 136 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 192
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ +E
Sbjct: 193 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS---------------SE 235
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 236 CQHLI------RWCLALRPSDRPTFEEI 257
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 141 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 194
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 247
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 248 ----------SECQHLI------RWCLALRPSDRPTFEEI 271
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ E
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQRVS---------------XE 263
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 264 CQHLI------RWCLALRPSDRPTFEEI 285
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 28/164 (17%)
Query: 2 ILSQINHRNVVKLLGC-----CLETEVPLLVYEFIPNGSLHQYIHEQ--TEDQLPITWEI 54
+L + H NV+ LL LE + + + L+ + Q T+D +
Sbjct: 74 LLKHMKHENVIGLLDVFTPARSLEEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQF---- 129
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ L Y+HSA I HRD+K +N+ +++ KI DFG R H
Sbjct: 130 ---LIYQILRGLKYIHSAD---IIHRDLKPSNLAVNEDSELKILDFGLCR-------HTD 176
Query: 115 TQVKG---TFGYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
++ G T Y PE + + D++S G ++ ELLTG+
Sbjct: 177 DEMTGYVATRWYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 142 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 195
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 248
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 249 ----------SECQHLI------RWCLALRPSDRPTFEEI 272
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 47.8 bits (112), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 126 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 179
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 232
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 233 ----------SECQHLI------RWCLALRPSDRPTFEEI 256
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 47.4 bits (111), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 127 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 180
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 233
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 234 ----------SECQHLI------RWCLALRPSDRPTFEEI 257
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 126 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 179
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 180 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 232
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 233 ----------SECQHLI------RWCLALRPSDRPTFEEI 256
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 49/99 (49%), Gaps = 8/99 (8%)
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLTTQV 117
++ + YLH+ + HRD+K +NIL D+ +I DFG ++ + + L T
Sbjct: 125 ITKTVEYLHAQG---VVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLXTPC 181
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
T ++ PE + + D++S GV+L LTG P
Sbjct: 182 Y-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 164 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 220
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ E
Sbjct: 221 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQRVS---------------XE 263
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 264 CQHLI------RWCLALRPSDRPTFEEI 285
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 163 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 219
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ E
Sbjct: 220 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIGGQVFFRQRVS---------------XE 262
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 263 CQHLI------RWCLALRPSDRPTFEEI 284
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 38/156 (24%), Positives = 70/156 (44%), Gaps = 11/156 (7%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL +N +VKL + +V E++ G + ++ P R A +
Sbjct: 94 ILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEP---HARF-YAAQ 149
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTF 121
+ YLHS + + +RD+K N+L+D + +++DFG ++ + T + GT
Sbjct: 150 IVLTFEYLHS---LDLIYRDLKPENLLIDQQGYIQVTDFGFAKRV----KGRTWXLCGTP 202
Query: 122 GYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
L PE S + + D ++ GV++ E+ G P
Sbjct: 203 EALAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 74/160 (46%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 127 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 180
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 181 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 233
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+E + +I + CL L RPT +E+
Sbjct: 234 ----------SECQHLI------RWCLALRPSDRPTFEEI 257
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 47.4 bits (111), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 8/87 (9%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVK-GTFGY 123
AL++LHS + H D+K ANI L + R K+ DFG + T +V+ G Y
Sbjct: 169 ALAHLHSQG---LVHLDVKPANIFLGPRGRCKLGDFGLLVELG---TAGAGEVQEGDPRY 222
Query: 124 LDPEYFQSSQFTEKSDVYSFGVVLVEL 150
+ PE Q S + +DV+S G+ ++E+
Sbjct: 223 MAPELLQGS-YGTAADVFSLGLTILEV 248
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH-----SAASIPIYH 79
LV ++ +GSL Y++ T +T E + +A+ + L++LH + I H
Sbjct: 77 WLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 131
Query: 80 RDIKSANILLDDKYRAKISDFGTS--RSMAVDRTHLTTQVK-GTFGYLDPEYFQSS---- 132
RD+KS NIL+ I+D G + A D + + GT Y+ PE S
Sbjct: 132 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 191
Query: 133 --QFTEKSDVYSFGVVLVEL 150
+ +++D+Y+ G+V E+
Sbjct: 192 HFESFKRADIYAMGLVFWEI 211
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH-----SAASIPIYH 79
LV ++ +GSL Y++ T +T E + +A+ + L++LH + I H
Sbjct: 80 WLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 134
Query: 80 RDIKSANILLDDKYRAKISDFGTS--RSMAVDRTHLTTQVK-GTFGYLDPEYFQSS---- 132
RD+KS NIL+ I+D G + A D + + GT Y+ PE S
Sbjct: 135 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 194
Query: 133 --QFTEKSDVYSFGVVLVEL 150
+ +++D+Y+ G+V E+
Sbjct: 195 HFESFKRADIYAMGLVFWEI 214
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH-----SAASIPIYH 79
LV ++ +GSL Y++ T +T E + +A+ + L++LH + I H
Sbjct: 78 WLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 132
Query: 80 RDIKSANILLDDKYRAKISDFGTS--RSMAVDRTHLTTQVK-GTFGYLDPEYFQSS---- 132
RD+KS NIL+ I+D G + A D + + GT Y+ PE S
Sbjct: 133 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 192
Query: 133 --QFTEKSDVYSFGVVLVEL 150
+ +++D+Y+ G+V E+
Sbjct: 193 HFESFKRADIYAMGLVFWEI 212
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/140 (27%), Positives = 66/140 (47%), Gaps = 19/140 (13%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH-----SAASIPIYH 79
LV ++ +GSL Y++ T +T E + +A+ + L++LH + I H
Sbjct: 83 WLVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAH 137
Query: 80 RDIKSANILLDDKYRAKISDFGTS--RSMAVDRTHLTTQVK-GTFGYLDPEYFQSS---- 132
RD+KS NIL+ I+D G + A D + + GT Y+ PE S
Sbjct: 138 RDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMK 197
Query: 133 --QFTEKSDVYSFGVVLVEL 150
+ +++D+Y+ G+V E+
Sbjct: 198 HFESFKRADIYAMGLVFWEI 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/103 (30%), Positives = 54/103 (52%), Gaps = 14/103 (13%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQVKGTF 121
A+ LH + I HRD+K +N+L++ K+ DFG +R + A D + T Q G
Sbjct: 124 AVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 122 GYLDPEYFQ-------SSQFTEKSDVYSFGVVLVELLTGQKPI 157
Y+ +++ S++++ DV+S G +L EL ++PI
Sbjct: 181 EYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 47.4 bits (111), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL Q+ H NV+ L +L+ E + G L ++ ++ ++ E +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQ 123
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLTTQV 117
+ ++YLH+ I H D+K NI+L DK K+ DFG + + D +
Sbjct: 124 ILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKN-I 178
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL Q+ H NV+ L +L+ E + G L ++ ++ ++ E +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQ 123
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLTTQV 117
+ ++YLH+ I H D+K NI+L DK K+ DFG + + D +
Sbjct: 124 ILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKN-I 178
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 178 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 234
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ E
Sbjct: 235 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS---------------XE 277
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 278 CQHLI------RWCLALRPSDRPTFEEI 299
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/148 (27%), Positives = 68/148 (45%), Gaps = 28/148 (18%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG+ A+ + + T GT Y PE+ + ++
Sbjct: 183 VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVYSPPEWIRYHRYH 239
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQVLREAE 194
+S V+S G++L +++ G P EE +F Q ++ E
Sbjct: 240 GRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS---------------XE 282
Query: 195 KEEVITVAMVAKRCLNLNGKKRPTMKEV 222
+ +I + CL L RPT +E+
Sbjct: 283 CQHLI------RWCLALRPSDRPTFEEI 304
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 19/139 (13%)
Query: 26 LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH-----SAASIPIYHR 80
LV ++ +GSL Y++ T +T E + +A+ + L++LH + I HR
Sbjct: 104 LVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 158
Query: 81 DIKSANILLDDKYRAKISDFGTS--RSMAVDRTHLTTQVK-GTFGYLDPEYFQSS----- 132
D+KS NIL+ I+D G + A D + + GT Y+ PE S
Sbjct: 159 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 218
Query: 133 -QFTEKSDVYSFGVVLVEL 150
+ +++D+Y+ G+V E+
Sbjct: 219 FESFKRADIYAMGLVFWEI 237
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL Q+ H NV+ L +L+ E + G L ++ ++ ++ E +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQ 123
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLTTQV 117
+ ++YLH+ I H D+K NI+L DK K+ DFG + + D +
Sbjct: 124 ILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKN-I 178
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 19/139 (13%)
Query: 26 LVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLH-----SAASIPIYHR 80
LV ++ +GSL Y++ T +T E + +A+ + L++LH + I HR
Sbjct: 117 LVSDYHEHGSLFDYLNRYT-----VTVEGMIKLALSTASGLAHLHMEIVGTQGKPAIAHR 171
Query: 81 DIKSANILLDDKYRAKISDFGTS--RSMAVDRTHLTTQVK-GTFGYLDPEYFQSS----- 132
D+KS NIL+ I+D G + A D + + GT Y+ PE S
Sbjct: 172 DLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRYMAPEVLDDSINMKH 231
Query: 133 -QFTEKSDVYSFGVVLVEL 150
+ +++D+Y+ G+V E+
Sbjct: 232 FESFKRADIYAMGLVFWEI 250
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL Q+ H NV+ L +L+ E + G L ++ ++ ++ E +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQ 123
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLTTQV 117
+ ++YLH+ I H D+K NI+L DK K+ DFG + + D +
Sbjct: 124 ILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKN-I 178
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/149 (28%), Positives = 69/149 (46%), Gaps = 30/149 (20%)
Query: 77 IYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFT 135
+ HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y PE+ + ++
Sbjct: 131 VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVYSPPEWIRYHRYH 187
Query: 136 EKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLFEVLDAQV-LREA 193
+S V+S G++L +++ G P E +E E++ QV R+
Sbjct: 188 GRSAAVWSLGILLYDMVCGDIPF---EHDE------------------EIIRGQVFFRQR 226
Query: 194 EKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E + + CL L RPT +E+
Sbjct: 227 VSXE---CQHLIRWCLALRPSDRPTFEEI 252
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
L Y+HSA I HRD+K +N+ +++ +I DFG +R + T T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV----ATRWYR 195
Query: 125 DPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
PE + + D++S G ++ ELL G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 73/160 (45%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG+ A+ + + T GT Y
Sbjct: 149 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFGSG---ALLKDTVYTDFDGTRVY 202
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 203 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 255
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E + +I + CL L RPT +E+
Sbjct: 256 ----------XECQHLI------RWCLALRPSDRPTFEEI 279
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL Q+ H NV+ L +L+ E + G L ++ ++ ++ E +
Sbjct: 68 ILRQVLHHNVITLHDVYENRTDVVLILELVSGGELFDFLAQKES----LSEEEATSFIKQ 123
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLTTQV 117
+ ++YLH+ I H D+K NI+L DK K+ DFG + + D +
Sbjct: 124 ILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKN-I 178
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 141 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 194
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 195 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 247
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E + +I + CL L RPT +E+
Sbjct: 248 ----------XECQHLI------RWCLALRPSDRPTFEEI 271
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 48/94 (51%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI D+G +R H ++ G T
Sbjct: 137 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDYGLAR-------HTDDEMTGYVATR 186
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + + D++S G ++ ELLTG+
Sbjct: 187 WYRAPEIMLNWMHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 39/141 (27%), Positives = 68/141 (48%), Gaps = 13/141 (9%)
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILL----DDKYRAKISDFGTSRSMAVDRTHLT-- 114
++ + YLH+ + HRD+K ANIL+ ++ R KI+D G +R L
Sbjct: 136 QILDGIHYLHANW---VLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADL 192
Query: 115 TQVKGTFGYLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFL 173
V TF Y PE ++ +T+ D+++ G + ELLT + PI E+ ++ Y
Sbjct: 193 DPVVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE-PIFHCRQEDIKTSNPYHH 251
Query: 174 QVINENRLFEVLDAQVLREAE 194
+ +R+F V+ ++ E
Sbjct: 252 DQL--DRIFNVMGFPADKDWE 270
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 142 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 195
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 248
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E + +I + CL L RPT +E+
Sbjct: 249 ----------XECQHLI------RWCLALRPSDRPTFEEI 272
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKS 84
L++ E + G L I E+ + T I ++ A+ +LHS I HRD+K
Sbjct: 83 LIIMECMEGGELFSRIQERGDQAF--TEREAAEIMRDIGTAIQFLHSHN---IAHRDVKP 137
Query: 85 ANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVY 141
N+L K + K++DFG ++ + L T + Y+ PE ++ + D++
Sbjct: 138 ENLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPY-YVAPEVLGPEKYDKSCDMW 194
Query: 142 SFGVVLVELLTGQKPI 157
S GV++ LL G P
Sbjct: 195 SLGVIMYILLCGFPPF 210
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
L Y+HSA I HRD+K +N+ +++ +I DFG +R + T T Y
Sbjct: 143 GLKYIHSAG---IIHRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYV----ATRWYR 195
Query: 125 DPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
PE + + D++S G ++ ELL G+
Sbjct: 196 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 226
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 47.0 bits (110), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
+ + T Y PE + E D++S G ++ E++
Sbjct: 179 -SFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 11/136 (8%)
Query: 25 LLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKS 84
L++ E + G L I E+ + T I ++ A+ +LHS I HRD+K
Sbjct: 102 LIIMECMEGGELFSRIQERGDQAF--TEREAAEIMRDIGTAIQFLHSHN---IAHRDVKP 156
Query: 85 ANILLDDKYRA---KISDFGTSRSMAVDRTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVY 141
N+L K + K++DFG ++ + L T + Y+ PE ++ + D++
Sbjct: 157 ENLLYTSKEKDAVLKLTDFGFAKETT--QNALQTPCYTPY-YVAPEVLGPEKYDKSCDMW 213
Query: 142 SFGVVLVELLTGQKPI 157
S GV++ LL G P
Sbjct: 214 SLGVIMYILLCGFPPF 229
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 73/172 (42%), Gaps = 20/172 (11%)
Query: 5 QINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVEVSG 64
Q H NVV +G C+ ++ +L+ + + ++ + IA E+
Sbjct: 85 QTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRDA---KIVLDVNKTRQIAQEIVK 141
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFG---TSRSMAVDRTHLTTQVK-GT 120
+ YLH+ I H+D+KS N+ D+ + I+DFG S + R +++ G
Sbjct: 142 GMGYLHAKG---ILHKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGW 197
Query: 121 FGYLDPEYFQSSQ---------FTEKSDVYSFGVVLVELLTGQKPIRLVETE 163
+L PE + F++ SDV++ G + EL + P + E
Sbjct: 198 LCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWPFKTQPAE 249
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/91 (30%), Positives = 45/91 (49%), Gaps = 8/91 (8%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
L Y+HSA I HRD+K +N+ +++ +I DFG +R + T T Y
Sbjct: 135 GLKYIHSAG---IIHRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYV----ATRWYR 187
Query: 125 DPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
PE + + D++S G ++ ELL G+
Sbjct: 188 APEIMLNWMHYNQTVDIWSVGCIMAELLQGK 218
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/160 (26%), Positives = 73/160 (45%), Gaps = 31/160 (19%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLD-DKYRAKISDFGTSRSMAVDRTHLTTQVKGTFGY 123
A+ + H+ + HRDIK NIL+D ++ K+ DFG S A+ + + T GT Y
Sbjct: 142 AVRHCHNCG---VLHRDIKDENILIDLNRGELKLIDFG---SGALLKDTVYTDFDGTRVY 195
Query: 124 LDPEYFQSSQFTEKS-DVYSFGVVLVELLTGQKPIRLVETEENRSLAAYFLQVINENRLF 182
PE+ + ++ +S V+S G++L +++ G P EE +F Q ++
Sbjct: 196 SPPEWIRYHRYHGRSAAVWSLGILLYDMVCGDIPFE--HDEEIIRGQVFFRQRVS----- 248
Query: 183 EVLDAQVLREAEKEEVITVAMVAKRCLNLNGKKRPTMKEV 222
E + +I + CL L RPT +E+
Sbjct: 249 ----------XECQHLI------RWCLALRPXDRPTFEEI 272
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 46.6 bits (109), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 70/161 (43%), Gaps = 22/161 (13%)
Query: 2 ILSQINHRNVVKLLGCCLETEVP------LLVYEFIPNGSLHQYIHEQ-TEDQLPITWEI 54
+L + H NV+ LL E LV F+ HE+ ED++
Sbjct: 77 LLKHMRHENVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF---- 132
Query: 55 RLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLT 114
+ ++ L Y+H+A I HRD+K N+ +++ KI DFG +R +
Sbjct: 133 ---LVYQMLKGLRYIHAAG---IIHRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXV 186
Query: 115 TQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQ 154
T Y PE ++T+ D++S G ++ E++TG+
Sbjct: 187 V----TRWYRAPEVILNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQVKG-- 119
A+ LH + I HRD+K +N+L++ K+ DFG +R + A D + T Q G
Sbjct: 124 AVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMV 180
Query: 120 ----TFGYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T Y PE S++++ DV+S G +L EL ++PI
Sbjct: 181 EFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/103 (33%), Positives = 53/103 (51%), Gaps = 14/103 (13%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSM---AVDRTHLTTQVKG-- 119
A+ LH + I HRD+K +N+L++ K+ DFG +R + A D + T Q G
Sbjct: 124 AVKVLHGSNVI---HRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMT 180
Query: 120 ----TFGYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
T Y PE S++++ DV+S G +L EL ++PI
Sbjct: 181 EXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI 222
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 47/94 (50%), Gaps = 14/94 (14%)
Query: 65 ALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKG---TF 121
L Y+HSA I HRD+K +N+ +++ KI DFG +R H ++ G T
Sbjct: 166 GLKYIHSAD---IIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMTGYVATR 215
Query: 122 GYLDPE-YFQSSQFTEKSDVYSFGVVLVELLTGQ 154
Y PE + D++S G ++ ELLTG+
Sbjct: 216 WYRAPEIMLNWMHYNMTVDIWSVGCIMAELLTGR 249
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL--------LVYEFIPN---GSLHQYIHEQTEDQLPI 50
IL + H NVV L+ C P LV++F + G L + + T
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLS---- 125
Query: 51 TWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR 110
EI+ + + ++G L Y+H I HRD+K+AN+L+ K++DFG +R+ ++ +
Sbjct: 126 --EIKRVMQMLLNG-LYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 111 THLTTQVKG---TFGYLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPIRLVETEENR 166
+ T Y PE + + D++ G ++ E+ T + PI TE+++
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 71/162 (43%), Gaps = 28/162 (17%)
Query: 1 IILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQ----YIHEQTED-------QLP 49
+++ +NH+N++ LL F P SL + YI + D Q+
Sbjct: 75 VLMKCVNHKNIIGLLNV------------FTPQKSLEEFQDVYIVMELMDANLCQVIQME 122
Query: 50 ITWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD 109
+ E + ++ + +LHSA I HRD+K +NI++ KI DFG +R+
Sbjct: 123 LDHERMSYLLYQMLCGIKHLHSAG---IIHRDLKPSNIVVKSDCTLKILDFGLARTAGT- 178
Query: 110 RTHLTTQVKGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELL 151
+ + T Y PE + E D++S G ++ E++
Sbjct: 179 -SFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMV 219
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL--------LVYEFIPN---GSLHQYIHEQTEDQLPI 50
IL + H NVV L+ C P LV++F + G L + + T
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS---- 125
Query: 51 TWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR 110
EI+ + + ++G L Y+H I HRD+K+AN+L+ K++DFG +R+ ++ +
Sbjct: 126 --EIKRVMQMLLNG-LYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 111 THLTTQVKG---TFGYLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPIRLVETEENR 166
+ T Y PE + + D++ G ++ E+ T + PI TE+++
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 46.2 bits (108), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL--------LVYEFIPN---GSLHQYIHEQTEDQLPI 50
IL + H NVV L+ C P LV++F + G L + + T
Sbjct: 69 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS---- 124
Query: 51 TWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR 110
EI+ + + ++G L Y+H I HRD+K+AN+L+ K++DFG +R+ ++ +
Sbjct: 125 --EIKRVMQMLLNG-LYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 178
Query: 111 THLTTQVKG---TFGYLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPIRLVETEENR 166
+ T Y PE + + D++ G ++ E+ T + PI TE+++
Sbjct: 179 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 237
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 71/159 (44%), Gaps = 13/159 (8%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
IL Q+ H N++ L +L+ E + G L ++ ++ ++ E +
Sbjct: 68 ILRQVLHPNIITLHDVYENRTDVVLILELVSGGELFDFLAQKE----SLSEEEATSFIKQ 123
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILLDDKY----RAKISDFGTSRSMAVDRTHLTTQV 117
+ ++YLH+ I H D+K NI+L DK K+ DFG + + D +
Sbjct: 124 ILDGVNYLHTKK---IAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIE-DGVEFKN-I 178
Query: 118 KGTFGYLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
GT ++ PE ++D++S GV+ LL+G P
Sbjct: 179 FGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 76/161 (47%), Gaps = 16/161 (9%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNGSLHQYIHEQTEDQLPITWEIRLGIAVE 61
+++Q++H N+++L +LV E++ G L I +++ + +T + +
Sbjct: 139 VMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYN---LTELDTILFMKQ 195
Query: 62 VSGALSYLHSAASIPIYHRDIKSANILL--DDKYRAKISDFGTSRSMAVDRTHLTTQVKG 119
+ + ++H + I H D+K NIL D + KI DFG +R R ++K
Sbjct: 196 ICEGIRHMH---QMYILHLDLKPENILCVNRDAKQIKIIDFGLAR-----RYKPREKLKV 247
Query: 120 TFG---YLDPEYFQSSQFTEKSDVYSFGVVLVELLTGQKPI 157
FG +L PE + +D++S GV+ LL+G P
Sbjct: 248 NFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3DLS|A Chain A, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|B Chain B, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|C Chain C, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|D Chain D, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|E Chain E, Crystal Structure Of Human Pas Kinase Bound To Adp
pdb|3DLS|F Chain F, Crystal Structure Of Human Pas Kinase Bound To Adp
Length = 335
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/194 (26%), Positives = 84/194 (43%), Gaps = 24/194 (12%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPLLVYEFIPNG-SLHQYIHEQTEDQLPITWEIRLGIAV 60
ILS++ H N++K+L LV E +G L +I P+ I
Sbjct: 82 ILSRVEHANIIKVLDIFENQGFFQLVMEKHGSGLDLFAFIDRHPRLDEPLA----SYIFR 137
Query: 61 EVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDRTHLTTQVKGT 120
++ A+ YL I HRDIK NI++ + + K+ DFG++ + +R L GT
Sbjct: 138 QLVSAVGYLRLKD---IIHRDIKDENIVIAEDFTIKLIDFGSAAYL--ERGKLFYTFCGT 192
Query: 121 FGYLDPEYFQSSQF-TEKSDVYSFGVVLVELLTGQKPIRLVE-------------TEENR 166
Y PE + + + +++S GV L L+ + P +E ++E
Sbjct: 193 IEYCAPEVLMGNPYRGPELEMWSLGVTLYTLVFEENPFCELEETVEAAIHPPYLVSKELM 252
Query: 167 SLAAYFLQVINENR 180
SL + LQ + E R
Sbjct: 253 SLVSGLLQPVPERR 266
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/92 (34%), Positives = 42/92 (45%), Gaps = 8/92 (8%)
Query: 68 YLHSAASIPIYHRDIKSANILLDDKY---RAKISDFGTSRSMAVDRTHLTTQVKGTFGYL 124
YLH I H D+K NILL Y KI DFG SR + ++ GT YL
Sbjct: 146 YLHQNN---IVHLDLKPQNILLSSIYPLGDIKIVDFGMSRKIG--HACELREIMGTPEYL 200
Query: 125 DPEYFQSSQFTEKSDVYSFGVVLVELLTGQKP 156
PE T +D+++ G++ LLT P
Sbjct: 201 APEILNYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 70/170 (41%), Gaps = 29/170 (17%)
Query: 2 ILSQINHRNVVKLLGCCLETEVP-----LLVYEFIPNGSLHQYIHEQTEDQLP-----IT 51
+L+ +H N++ L + E P LV E + L Q IH+Q P
Sbjct: 82 LLNHFHHPNILGLRDIFVHFEEPAMHKLYLVTELM-RTDLAQVIHDQRIVISPQHIQYFM 140
Query: 52 WEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVD-- 109
+ I LG+ V LH A + HRD+ NILL D I DF +R D
Sbjct: 141 YHILLGLHV--------LHEAG---VVHRDLHPGNILLADNNDITICDFNLAREDTADAN 189
Query: 110 RTHLTTQVKGTFGYLDPEY-FQSSQFTEKSDVYSFGVVLVELLTGQKPIR 158
+TH T Y PE Q FT+ D++S G V+ E+ + R
Sbjct: 190 KTHYVTHR----WYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRKALFR 235
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 45.8 bits (107), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 46/180 (25%), Positives = 82/180 (45%), Gaps = 26/180 (14%)
Query: 2 ILSQINHRNVVKLLGCCLETEVPL--------LVYEFIPN---GSLHQYIHEQTEDQLPI 50
IL + H NVV L+ C P LV++F + G L + + T
Sbjct: 70 ILQLLKHENVVNLIEICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS---- 125
Query: 51 TWEIRLGIAVEVSGALSYLHSAASIPIYHRDIKSANILLDDKYRAKISDFGTSRSMAVDR 110
EI+ + + ++G L Y+H I HRD+K+AN+L+ K++DFG +R+ ++ +
Sbjct: 126 --EIKRVMQMLLNG-LYYIHRNK---ILHRDMKAANVLITRDGVLKLADFGLARAFSLAK 179
Query: 111 THLTTQVKG---TFGYLDPEYFQSSQ-FTEKSDVYSFGVVLVELLTGQKPIRLVETEENR 166
+ T Y PE + + D++ G ++ E+ T + PI TE+++
Sbjct: 180 NSQPNRYXNRVVTLWYRPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPIMQGNTEQHQ 238
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.136 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,245,134
Number of Sequences: 62578
Number of extensions: 269068
Number of successful extensions: 2914
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 199
Number of HSP's that attempted gapping in prelim test: 767
Number of HSP's gapped (non-prelim): 1097
length of query: 295
length of database: 14,973,337
effective HSP length: 98
effective length of query: 197
effective length of database: 8,840,693
effective search space: 1741616521
effective search space used: 1741616521
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 51 (24.3 bits)