Query 045990
Match_columns 298
No_of_seqs 163 out of 392
Neff 5.6
Searched_HMMs 46136
Date Fri Mar 29 07:35:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045990.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045990hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02973 beta-fructofuranosida 100.0 1.1E-85 2.5E-90 646.1 21.5 291 8-298 281-571 (571)
2 PLN03005 beta-fructofuranosida 100.0 1.1E-84 2.3E-89 638.3 21.1 290 8-297 260-549 (550)
3 PF12899 Glyco_hydro_100: Alka 100.0 2.2E-82 4.8E-87 611.5 20.9 265 8-272 172-436 (436)
4 PLN02703 beta-fructofuranosida 100.0 5.3E-81 1.2E-85 616.1 20.3 279 8-286 313-591 (618)
5 PF06202 GDE_C: Amylo-alpha-1, 100.0 5.9E-41 1.3E-45 324.7 17.8 196 17-264 162-370 (370)
6 TIGR01531 glyc_debranch glycog 100.0 1.2E-36 2.7E-41 326.6 17.8 221 17-267 1219-1462(1464)
7 TIGR01561 gde_arch glycogen de 100.0 5.9E-31 1.3E-35 267.3 11.2 154 16-211 421-575 (575)
8 COG3408 GDB1 Glycogen debranch 100.0 1E-29 2.2E-34 261.1 17.2 195 14-270 410-609 (641)
9 PRK10137 alpha-glucosidase; Pr 99.9 5E-23 1.1E-27 214.5 16.8 201 20-267 577-781 (786)
10 PRK13271 treA trehalase; Provi 99.8 6.1E-20 1.3E-24 186.5 19.6 192 19-271 337-538 (569)
11 PRK13272 treA trehalase; Provi 99.7 3E-16 6.6E-21 158.7 18.3 191 19-271 338-538 (542)
12 PRK13270 treF trehalase; Provi 99.7 4.1E-16 9E-21 158.0 17.8 190 19-270 347-547 (549)
13 PLN02567 alpha,alpha-trehalase 99.7 3.5E-15 7.6E-20 151.9 18.4 207 19-274 326-549 (554)
14 KOG3625 Alpha amylase [Carbohy 99.6 9.9E-15 2.1E-19 151.9 14.4 223 17-269 1264-1516(1521)
15 PF01204 Trehalase: Trehalase; 99.6 6E-14 1.3E-18 141.8 19.0 195 19-268 305-510 (512)
16 PF03200 Glyco_hydro_63: Manno 99.5 2.8E-13 6.1E-18 143.1 15.3 234 3-266 540-798 (801)
17 TIGR01577 oligosac_amyl oligos 99.5 4.8E-13 1.1E-17 137.6 16.0 190 17-270 409-614 (616)
18 COG3387 SGA1 Glucoamylase and 98.8 1.6E-07 3.5E-12 97.2 15.8 191 11-271 409-606 (612)
19 KOG2161 Glucosidase I [Carbohy 98.8 1.3E-07 2.7E-12 98.0 14.6 222 20-264 602-842 (849)
20 COG1626 TreA Neutral trehalase 98.4 7.1E-06 1.5E-10 83.1 16.2 206 3-271 328-554 (558)
21 PF04685 DUF608: Protein of un 98.0 1.8E-05 3.9E-10 77.4 8.6 180 16-248 161-351 (365)
22 COG3459 Cellobiose phosphoryla 97.9 0.00019 4.2E-09 76.9 13.2 165 18-226 754-922 (1056)
23 KOG0602 Neutral trehalase [Car 97.8 0.00027 5.9E-09 72.8 12.9 198 19-275 355-570 (600)
24 TIGR01535 glucan_glucosid gluc 97.7 0.0029 6.3E-08 66.4 18.1 217 24-275 405-638 (648)
25 PF05592 Bac_rhamnosid: Bacter 97.6 0.00019 4E-09 72.2 8.8 163 18-266 271-442 (509)
26 PF06824 DUF1237: Protein of u 95.6 0.11 2.3E-06 52.2 10.8 190 16-262 224-418 (424)
27 PF00723 Glyco_hydro_15: Glyco 95.6 0.13 2.7E-06 51.4 11.4 33 231-266 414-447 (448)
28 COG4354 Predicted bile acid be 76.5 34 0.00075 36.1 11.5 169 16-234 504-682 (721)
29 PLN02567 alpha,alpha-trehalase 45.2 3.3E+02 0.0072 28.5 12.2 38 199-236 154-192 (554)
30 PF07721 TPR_4: Tetratricopept 42.7 47 0.001 19.7 3.4 25 200-224 1-25 (26)
31 KOG2119 Predicted bile acid be 42.5 4.3E+02 0.0093 29.0 12.4 227 17-294 620-859 (879)
32 COG3538 Uncharacterized conser 41.5 1.5E+02 0.0033 29.8 8.4 45 16-64 224-268 (434)
33 PF06051 DUF928: Domain of Unk 35.7 40 0.00086 30.2 3.3 22 24-45 144-165 (189)
34 PF13428 TPR_14: Tetratricopep 30.3 1.3E+02 0.0028 19.7 4.4 31 200-230 1-31 (44)
35 PF12854 PPR_1: PPR repeat 29.3 80 0.0017 19.9 3.1 23 203-225 10-32 (34)
36 PF15601 Imm42: Immunity prote 27.5 33 0.00072 29.4 1.3 41 194-234 33-73 (134)
37 PF13812 PPR_3: Pentatricopept 25.3 1.4E+02 0.0031 17.6 3.7 24 204-227 5-28 (34)
38 PRK13270 treF trehalase; Provi 21.6 1.2E+02 0.0025 31.9 4.2 35 201-235 175-209 (549)
39 PRK13272 treA trehalase; Provi 21.4 1.2E+02 0.0025 31.9 4.1 35 201-235 164-198 (542)
40 PRK13271 treA trehalase; Provi 21.4 1.2E+02 0.0026 32.0 4.2 35 201-235 163-197 (569)
41 PF13249 Prenyltrans_2: Prenyl 20.6 3.8E+02 0.0083 20.4 6.2 43 195-237 18-63 (113)
No 1
>PLN02973 beta-fructofuranosidase
Probab=100.00 E-value=1.1e-85 Score=646.11 Aligned_cols=291 Identities=86% Similarity=1.485 Sum_probs=286.0
Q ss_pred eeecccCCcccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhh
Q 045990 8 HVSCENLGIYGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHT 87 (298)
Q Consensus 8 ~~~~~~~~~~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~ 87 (298)
-||||||||+|||+|||||||.|||++.+|+....+..+.+.++.+|+.+|+.+++++||++.+++|.||||+||+|+++
T Consensus 281 ~miDrrMgv~G~pLeiQaLfy~ALR~a~~~L~~~~~~~~~i~~i~~rl~~L~~hir~~ywld~~~ln~iyRykteey~~~ 360 (571)
T PLN02973 281 CMIDRRMGVYGYPIEIQALFFMALRCALLLLKHDGEGKEMVEQIVKRLHALSYHMRSYFWLDLKQLNDIYRYKTEEYSHT 360 (571)
T ss_pred cccccccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHHHHHHhhHHHHHHHHHHHHhcCHHHhhhHhhcchhhcchh
Confidence 59999999999999999999999999999887756678899999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCc
Q 045990 88 AVNKFNVIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLK 167 (298)
Q Consensus 88 a~n~~~i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLr 167 (298)
|.|||||+||+||+||+||||++|||+++||+|+++|+|||++||++|+++++++++|+++|++.+++||.+|+..||||
T Consensus 361 a~NkfNi~p~sip~wl~dwlp~~gGY~igNv~Pa~~DfRffslGNllAILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlk 440 (571)
T PLN02973 361 AVNKFNVIPDSLPEWVFDFMPPHGGFFIGNVSPARMDFRWFALGNCIAILSSLATPEQSTAIMDLIESRWEELVGEMPLK 440 (571)
T ss_pred hhhhccCCccccchhhhhhccCCCceeeeecccccCCcchhhhhhHHHHHhccCCHHHHHHHHHHHHHHHHHHHhcCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCCCcceeeCCCCCcC
Q 045990 168 IAYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARMLKDCWPEYYDGKLGRYI 247 (298)
Q Consensus 168 sl~Pp~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g~~E~FDg~tg~~~ 247 (298)
.|+||+++++|++++++||+|.|++||||++||+|+|+++.|++|.|+.+.|++.++.+++++..++|+|||||++|+++
T Consensus 441 icyPaie~~EWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~lA~ral~~ae~rl~~d~WpEyyDGktGr~i 520 (571)
T PLN02973 441 VCYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWLLTAACIKTGRPQIARRAIEVAEARLHKDHWPEYYDGKVGRYV 520 (571)
T ss_pred eeccCcCCccceehhccCCCCCccceecCCCccHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCChhhcCCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccchhhHHHHHHHHHHHHhhcCCCccccccccccccccccccccCCCCC
Q 045990 248 GKQARKYQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQMKPVIRRSSSWNC 298 (298)
Q Consensus 248 G~~a~~~QAWSaA~~Lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (298)
|.+|+..||||+|++|.++++|+||+++.+++|+|+++.+|+++||+||.|
T Consensus 521 Gkqar~yQTWSiAG~LlA~~~L~~P~~~~~~~~~e~~~~~~~~~~~~~~~~ 571 (571)
T PLN02973 521 GKQSRKNQTWSVAGYLVAKMMLEDPSHVGMVCLEEDKQMKPVMRRSNSWTC 571 (571)
T ss_pred ceeccccCchHHHHHHHHHHHhhChhhcccccccccccccchhccccccCC
Confidence 999999999999999999999999999999999999999999999999998
No 2
>PLN03005 beta-fructofuranosidase
Probab=100.00 E-value=1.1e-84 Score=638.27 Aligned_cols=290 Identities=84% Similarity=1.479 Sum_probs=284.1
Q ss_pred eeecccCCcccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhh
Q 045990 8 HVSCENLGIYGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHT 87 (298)
Q Consensus 8 ~~~~~~~~~~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~ 87 (298)
-||||||||+|||+|||||||.|||++.+|+....+..+.+..+.+|+.+|+.+++++||+|.+++|.||||+||+|+++
T Consensus 260 ~miDRrMgv~G~pLeiQaLfy~ALR~~~~~L~~~~~~~~~i~~i~~rl~~L~~h~r~yyWld~~~ln~iyr~kteey~~~ 339 (550)
T PLN03005 260 SMIDRRMGVYGYPIEIQALFFMALRSALSMLKPDGDGREFIERIVKRLHALSFHMRNYFWLDHQNLNDIYRFKTEEYSHT 339 (550)
T ss_pred cccccccccCCccHHHHHHHHHHHHHHHHhcCccchhHHHHHHHHHHHHHHHHHHHHheecchhhhhhhhhccHhhhchh
Confidence 49999999999999999999999999999887756678999999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCc
Q 045990 88 AVNKFNVIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLK 167 (298)
Q Consensus 88 a~n~~~i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLr 167 (298)
|.|||||+||+||+||+||||++|||+++||+|+++|+|||++||++|+++|+++++|+++|++.+++||.+|+..|||+
T Consensus 340 a~NkfNi~pd~ip~wl~dwlp~~gGY~igNv~pa~~dfRffslGNllAILs~Lat~~Qs~aIm~lIe~~w~~Lv~~MPlk 419 (550)
T PLN03005 340 AVNKFNVMPDSIPEWVFDFMPLRGGYFVGNVGPAHMDFRWFALGNCVSILSSLATPDQSMAIMDLLEHRWEELVGEMPLK 419 (550)
T ss_pred hhhccccCCccchhhhhhhcccCCceeeeecccccCCceehhhhhHHHHHhccCCHHHHHHHHHHHHHHHHHHhccCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCCCcceeeCCCCCcC
Q 045990 168 IAYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARMLKDCWPEYYDGKLGRYI 247 (298)
Q Consensus 168 sl~Pp~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g~~E~FDg~tg~~~ 247 (298)
.|+|+.++.+|++++++||+|.|++||||++||+|+|+++.|++|.|+.+.|++.++.+++++..++|+|||||++|+++
T Consensus 420 IcyPa~e~~eWri~tG~dpKN~PWSYHNGGsWP~Llw~~~aA~iK~gr~~lA~ral~~ae~rl~~d~WpEyydGktGr~i 499 (550)
T PLN03005 420 ICYPCLEGHEWRIVTGCDPKNTRWSYHNGGSWPVLLWQLTAACIKTGRPQIARRAVDLIESRLHRDCWPEYYDGKLGRYV 499 (550)
T ss_pred eeecccCCccceecccCCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhcCchhhcCCCCCccc
Confidence 99999988899999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccchhhHHHHHHHHHHHHhhcCCCccccccccccccccccccccCCCC
Q 045990 248 GKQARKYQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQMKPVIRRSSSWN 297 (298)
Q Consensus 248 G~~a~~~QAWSaA~~Lr~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 297 (298)
|.+|+..||||+|++|.++++|+||+++.+++|+|+++.+|++|||+||.
T Consensus 500 Gkqar~~QTWSiAG~Lla~~~L~~P~~~~~~~~~e~~~~~~~~~~~~~~~ 549 (550)
T PLN03005 500 GKQARKYQTWSIAGYLVAKMLLEDPSHIGMISLEEDKLMKPVIKRSASWP 549 (550)
T ss_pred ceeccccCchHHHHHHHHHHHhhChhhccccccccccccchhhhcccccc
Confidence 99999999999999999999999999999999999999999999999995
No 3
>PF12899 Glyco_hydro_100: Alkaline and neutral invertase; InterPro: IPR024746 This is a family of endo-alpha-N-acetylgalactosaminidases. This is a unique enzyme that hydrolyses core 1-type O-glycan from glycoproteins. The proteins are produced in the gut-flora bacteria from Actinobacteria and Firmicutes [].; GO: 0033926 glycopeptide alpha-N-acetylgalactosaminidase activity
Probab=100.00 E-value=2.2e-82 Score=611.52 Aligned_cols=265 Identities=73% Similarity=1.306 Sum_probs=259.9
Q ss_pred eeecccCCcccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhh
Q 045990 8 HVSCENLGIYGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHT 87 (298)
Q Consensus 8 ~~~~~~~~~~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~ 87 (298)
.||||||||+|||+|||||+|.|||||.+|+....+.++.++++.+|+.+|+.+++++||+|.+++|.||||+||||+++
T Consensus 172 ~MiDRrMgv~G~PlEiQ~Lf~~aLr~a~~ll~~~~~~~~~~~~i~~rl~~L~~h~r~~yWld~~~ln~iyr~~teey~~~ 251 (436)
T PF12899_consen 172 CMIDRRMGVYGHPLEIQALFYMALRCARELLKPDEEGKDLIERIDKRLHALSFHIREYYWLDLKRLNEIYRYKTEEYGHT 251 (436)
T ss_pred eeecccccccCCcchHHHHHHHHHHHHHHhcCcccchhHHHHHHHHHHHHHHHHHHHHhcccHHHHHHHHhccHhhhhhh
Confidence 49999999999999999999999999999998866678899999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCc
Q 045990 88 AVNKFNVIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLK 167 (298)
Q Consensus 88 a~n~~~i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLr 167 (298)
|.|||||+||+||+||+||+|++||||++|++|+++|+|||++||+||+++|+++++|+++|++.|+++|.+|+.++|||
T Consensus 252 a~N~fNi~p~~ip~wl~dwlp~~gGY~ignv~P~~~dfRff~lGNlLAiLsgLat~~qa~~I~~lIe~~~~~L~g~mPlk 331 (436)
T PF12899_consen 252 AVNKFNIYPDSIPDWLFDWLPEKGGYFIGNVSPARMDFRFFSLGNLLAILSGLATPEQAEAIMDLIEERWEDLVGPMPLK 331 (436)
T ss_pred hhhcccCCcccchHHHHHhcccCCceeEeeccccccceeehhhhhHHHHHhcCCCHHHHHHHHHHHHHHHhhhccccchh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCCCcceeeCCCCCcC
Q 045990 168 IAYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARMLKDCWPEYYDGKLGRYI 247 (298)
Q Consensus 168 sl~Pp~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g~~E~FDg~tg~~~ 247 (298)
.++||+++++|++++++||+|.|++|||||+||+|+|+++.|++|.|+.+.|++++...++++.+++|+|||||.+|+++
T Consensus 332 i~yPale~~eWri~tg~dpKN~PwsYHNGG~WP~LlW~~~aA~ik~gr~~lA~~al~~a~~rL~~dewpEyydGktGrp~ 411 (436)
T PF12899_consen 332 ICYPALEGEEWRIYTGCDPKNTPWSYHNGGSWPVLLWFLTAALIKMGRPELAERALEAAENRLSKDEWPEYYDGKTGRPM 411 (436)
T ss_pred hccCCCCCCCCccccCcCcCccccccccCCCcHHHHHHHHHHHHHcCCHHHHHHHHHHHHHhhcccCCcccccCCCCCcc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccchhhHHHHHHHHHHHHhhcCC
Q 045990 248 GKQARKYQTWSIAGYLVAKMMLEDP 272 (298)
Q Consensus 248 G~~a~~~QAWSaA~~Lr~~~~l~~~ 272 (298)
|++|+..||||||++|.++++|+||
T Consensus 412 Gkqar~~QTWSaAgyLlA~~~l~~p 436 (436)
T PF12899_consen 412 GKQARKYQTWSAAGYLLAKHLLENP 436 (436)
T ss_pred cccccccCchHHHHHHHHHHHhhCc
Confidence 9998899999999999999999998
No 4
>PLN02703 beta-fructofuranosidase
Probab=100.00 E-value=5.3e-81 Score=616.14 Aligned_cols=279 Identities=60% Similarity=1.100 Sum_probs=273.1
Q ss_pred eeecccCCcccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhh
Q 045990 8 HVSCENLGIYGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHT 87 (298)
Q Consensus 8 ~~~~~~~~~~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~ 87 (298)
-||||||||+|||+|||||||.|||++.+|+....+..+.+..+..|+.+|+.+++++||++.+++|.||||+||+|+++
T Consensus 313 ~miDRrMgv~G~PLEiQaLfy~ALR~a~~~L~~~~~~~e~i~~i~~rl~~L~~hir~~yWld~~~ln~iyRykteey~~~ 392 (618)
T PLN02703 313 CMIDRRMGIHGHPLEIQALFYSALVCAREMLTPEDGSVDLIRALNNRLVALNFHIREYYWLDLKKINEIYRYQTEEYSYD 392 (618)
T ss_pred chhccccCcCCccHHHHHHHHHHHHHHHHhcCccchHHHHHHHHhhhhhhhHHHHHHHHhhcHHHhhHHHhhhhhhcchh
Confidence 49999999999999999999999999999887756678899999999999999999999999999999999999999999
Q ss_pred HhhhccCCCCCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCc
Q 045990 88 AVNKFNVIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLK 167 (298)
Q Consensus 88 a~n~~~i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLr 167 (298)
|.|+|||+||+||+||.||||++||||+|||+|+++|+|||++||+||+++++++++|+++|++.++++|.+|+..|||+
T Consensus 393 A~NkfNi~p~siP~WL~dwlp~~gGYligNv~Pa~mDfRffsLGNlLAILs~Lat~~Qs~aIm~lIe~~w~~Lvg~MPlk 472 (618)
T PLN02703 393 AVNKFNIYPDQIPSWLVDFMPNRGGYLIGNLQPAHMDFRFFTLGNLWSIVSSLATNDQSHAILDLIEAKWAELVADMPLK 472 (618)
T ss_pred hhhhcccCCCCcchHhhhhccccCceeeeeecccccccchhhhhhHHHHHhcCCCHHHHHHHHHHHHHHHHHHhccCccc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cccCCccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCCCcceeeCCCCCcC
Q 045990 168 IAYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARMLKDCWPEYYDGKLGRYI 247 (298)
Q Consensus 168 sl~Pp~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g~~E~FDg~tg~~~ 247 (298)
.|+||+++++|++++++||+|.|++||||++||+|+|+++.|++|.|+.+.|+++++.+++++..++|+|||||++|+++
T Consensus 473 IcyPaie~~EWRi~TG~DpKN~PWSYHNGGsWP~LlWf~~aA~iK~Gr~~lA~ral~~ae~rl~~d~WpEYyDGktGr~i 552 (618)
T PLN02703 473 ICYPAMEGEEWRIITGSDPKNTPWSYHNGGAWPTLLWQLTVASIKMGRPEIAEKAVELAERRISLDKWPEYYDTKRARFI 552 (618)
T ss_pred cccCCcCCccceeeeCcCCCCCCccccCCCcchHHHHHHHHHHHHcCCHHHHHHHHHHHHHHhhhccChhhccCCCCcCc
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CcccchhhHHHHHHHHHHHHhhcCCCccccccccccccc
Q 045990 248 GKQARKYQTWSIAGYLVAKMMLEDPSHLGMISLEEDKQM 286 (298)
Q Consensus 248 G~~a~~~QAWSaA~~Lr~~~~l~~~~~~~~~~~~~~~~~ 286 (298)
|.+|+..||||+|++|.++++|+||+++.+++|+|+++.
T Consensus 553 Gkqar~yQTWSiAGyLlAk~~l~~P~~~~~~~~~e~~~~ 591 (618)
T PLN02703 553 GKQARLYQTWSIAGYLVAKLLLANPAAAKFLTSEEDSDL 591 (618)
T ss_pred ceeccccCchHHHHHHHHHHHHhChhhccccccccchhh
Confidence 999999999999999999999999999999999998865
No 5
>PF06202 GDE_C: Amylo-alpha-1,6-glucosidase ; InterPro: IPR010401 This family includes human glycogen branching enzyme P35573 from SWISSPROT. This enzyme contains a number of distinct catalytic activities. It has been shown for the yeast homologue O93808 from SWISSPROT that mutations in this region disrupt the enzymes Amylo-alpha-1,6-glucosidase (3.2.1.33 from EC).; GO: 0004135 amylo-alpha-1,6-glucosidase activity, 0005978 glycogen biosynthetic process
Probab=100.00 E-value=5.9e-41 Score=324.67 Aligned_cols=196 Identities=26% Similarity=0.373 Sum_probs=162.3
Q ss_pred ccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCC
Q 045990 17 YGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIP 96 (298)
Q Consensus 17 ~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~ 96 (298)
.|++||||||||+||+++++|++..+++ .+..+.++++.|+++|+++||++..
T Consensus 162 ~g~~vEIqal~y~AL~~~~~la~~~~~~--~a~~~~~~A~~lk~~F~~~FW~~~~------------------------- 214 (370)
T PF06202_consen 162 DGAAVEIQALWYNALRFAAELAEKFGDE--LAARYREWAERLKESFEKRFWDEDR------------------------- 214 (370)
T ss_pred CCcchHHHHHHHHHHHHHHHHHhhcCCc--hHHHHHHHHHHHHHHHHHHHcCCCC-------------------------
Confidence 5799999999999999999999863333 6777888899999999999999522
Q ss_pred CCCCccccccccCCCCceeccccCCC-cccchhcccch---hhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 045990 97 DSIPDWVFDFMPIRGGYFIGNVSPAR-MDFRWFALGNC---VAILSSLATPEQSMAIMDLIEARWEELVGEMPLKIAYPA 172 (298)
Q Consensus 97 ~~ip~~l~~~~~~~~gyl~~~v~p~~-~d~~~~a~gN~---LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp 172 (298)
||+.+.++++. .|. ..++|+ ++|++++++++++++|++++++ +|+||+|||||+|
T Consensus 215 ---------------g~~~d~ld~~~~~d~--~irpN~~~a~~L~~~~l~~~~a~~vl~~~~~---~L~tp~GlRTLs~- 273 (370)
T PF06202_consen 215 ---------------GYYADALDGDKEPDD--SIRPNQLIALSLPPGLLDPEQAKKVLDRVEE---ELLTPWGLRTLSP- 273 (370)
T ss_pred ---------------CEEEEEecCCCCCCc--ccccCchhHHhcCCccCCHHHHHHHHHHHHH---HcCCCCchhcccC-
Confidence 55555555432 333 444454 4799999999999999999854 9999999999999
Q ss_pred ccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCC-----HHHHHHHHHHHHHHHccCC---CcceeeCCC-
Q 045990 173 IESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGR-----PQIARRAIDLAEARMLKDC---WPEYYDGKL- 243 (298)
Q Consensus 173 ~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~-----~~~A~~ll~~~~~~l~~~g---~~E~FDg~t- 243 (298)
.++.|+|.|.|++..++.+||||+||||++++|+.|++|+|. ...++.++..+.+++...+ +||+|||++
T Consensus 274 -~~~~Y~p~y~g~~~~rd~sYHnGsvWpw~~g~~~~al~r~g~~~~~~~~~~~~ll~~~~~~~~~~~~~~lpEl~dg~~~ 352 (370)
T PF06202_consen 274 -SDPRYNPIYEGDQDSRDMSYHNGSVWPWDNGIYAEALLRYGFDEEEAIREAKSLLEGFEEHLQEFGLGRLPELFDGDPP 352 (370)
T ss_pred -CCCCcCCCCCCccccCcccccCCCcCcCcHHHHHHHHHHhCccchHHHHHHHHHHHHHHHHHhhccCCCcchhcCCCCC
Confidence 999999999999999999999999999999999999999986 3455666666666766555 899999976
Q ss_pred CCcCCcccchhhHHHHHHHHH
Q 045990 244 GRYIGKQARKYQTWSIAGYLV 264 (298)
Q Consensus 244 g~~~G~~a~~~QAWSaA~~Lr 264 (298)
..|.| |++||||||++||
T Consensus 353 ~~p~g---c~~QAWS~a~ilr 370 (370)
T PF06202_consen 353 HYPRG---CSPQAWSVAEILR 370 (370)
T ss_pred CCCCC---CHHHHHHHHHhhC
Confidence 45555 8899999999986
No 6
>TIGR01531 glyc_debranch glycogen debranching enzymye. glycogen debranching enzyme possesses two different catalytic activities; oligo-1,4--1,4-glucantransferase (EC 2.4.1.25) and amylo-1,6-glucosidase (EC 3.2.1.33). Site directed mutagenesis studies in S. cerevisiae indicate that the transferase and glucosidase activities are independent and located in different regions of the polypeptide chain. Proteins in this model belong to the larger alpha-amylase family. The model covers eukaryotic proteins with a seed composed of human, nematode and yeast sequences. Yeast seed sequence is well characterized. The model is quite rigorous; either query sequence yields large bit score or it fails to hit the model altogether. There doesn't appear to be any middle ground.
Probab=100.00 E-value=1.2e-36 Score=326.58 Aligned_cols=221 Identities=17% Similarity=0.220 Sum_probs=176.4
Q ss_pred ccceeehhHHHHHHHHHHHHhhhhc----ccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhc
Q 045990 17 YGYPIEIQALFFMALRCALSLLKHD----AEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKF 92 (298)
Q Consensus 17 ~G~~vEinALwYnAL~~~~~l~~~~----~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~ 92 (298)
+|+|||||||||||||++++|.+.. .+.......+.+.++.++++|.+.||++. .-.++||+ .+...|+.
T Consensus 1219 dG~aVEInaLwynAL~~~~~l~~~~~~~~~g~~~~~~~~~~wa~~ik~~Fe~~F~~~~-~~~~lyDv-----~~~~vnrr 1292 (1464)
T TIGR01531 1219 DGAAVEIVGLLKSALRFLIELKEKGVFKRSGVETQKWSYIEWNQKIQDNFEKRFFVDE-SQDADYDV-----AKLGVNRR 1292 (1464)
T ss_pred CCCceeHHHHHHHHHHHHHHHHHhcCcCcCCcccchhhHHHHHHHHHHHHhhhcCCCc-ccCccccc-----cchhhccc
Confidence 6999999999999999999999762 02221223355566667999999999953 23456776 34467888
Q ss_pred cCCCCCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 045990 93 NVIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLKIAYPA 172 (298)
Q Consensus 93 ~i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp 172 (298)
.||-|+.+. ..+|-...||||+. +| ++|+..++++++++++++.+ + +|++|+|||||+|
T Consensus 1293 gIykD~~~s--------~~~~~D~qlRPN~~----iA----~sla~~l~~~~~a~~~L~~v-~---~LltP~GlRTLdP- 1351 (1464)
T TIGR01531 1293 GIYKDSYGS--------TKPWTDYQLRPNFA----IA----MTVAPELFVPEKAWKALTIA-E---VLLGPLGMKTLDP- 1351 (1464)
T ss_pred cccccccCC--------CCCCCCcccCCCce----EE----EeCCcccCCHHHHHHHHHHH-H---HhccCCccccCCC-
Confidence 888776542 12343467888875 66 79999999999999999999 5 7999999999999
Q ss_pred ccCCCcceeccCCCCCCCC------ccccCCchhhhHHHHHHHHHHcCCH----------HHHHHHHHHHHHHHccCC--
Q 045990 173 IESHEWRIVTGCDPKNTRW------SYHNGGSWPVLLWMLTAACIKTGRP----------QIARRAIDLAEARMLKDC-- 234 (298)
Q Consensus 173 ~~d~~y~~~~~gd~~~rp~------aYHnG~vWP~l~g~~~~Al~k~G~~----------~~A~~ll~~~~~~l~~~g-- 234 (298)
.|+.|+|+|.+++.+++. +|||||+|||++|+|++|++|.+.. ..+++.+....+++.++|
T Consensus 1352 -~D~~Y~g~Y~g~~dsrD~~t~kg~aYHqG~eW~WllG~fl~A~lk~~~~~~~~~~~~~~~~~~~~L~~~~~~l~~~~~g 1430 (1464)
T TIGR01531 1352 -SDWNYRGYYNNGEDSDDFATAKGRNYHQGPEWVWPIGYFLRARLHFHFKTGPRCQAAAIKPVSYLLQQLYYHLKESPWR 1430 (1464)
T ss_pred -CCcCCCCccCCchhhccccccccccccCCCcCccchhHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHHhcCCC
Confidence 999999999999999998 9999999999999999999996421 234566777788888776
Q ss_pred -CcceeeCCCCCcCCcccchhhHHHHHHHHHHHH
Q 045990 235 -WPEYYDGKLGRYIGKQARKYQTWSIAGYLVAKM 267 (298)
Q Consensus 235 -~~E~FDg~tg~~~G~~a~~~QAWSaA~~Lr~~~ 267 (298)
++|+|||++ +.++.+ |+.||||||++|+++.
T Consensus 1431 ~l~El~dgdg-p~~~~g-c~aQAWSvaelLr~l~ 1462 (1464)
T TIGR01531 1431 GLPELTNKDG-EYCNDS-CPTQAWSVACLLELLY 1462 (1464)
T ss_pred CcccccCCCC-CCCCCC-CHHHHHHHHHHHHHHh
Confidence 899999976 444444 8899999999999854
No 7
>TIGR01561 gde_arch glycogen debranching enzyme, archaeal type, putative. The seed for this model is composed of two uncharacterized archaeal proteins from Methanosarcina acetivorans and Sulfolobus solfataricus. Trusted cutoff is set so that essentially only archaeal members hit the model. The notable exceptions to archaeal membership are the Gram positive Clostridium perfringens which scores much better than some other archaea and the Cyanobacterium Nostoc sp. which scores just above the trusted cutoff. Noise cutoff is set to exclude the characterized eukaryotic glycogen debranching enzyme in S. cerevisiae. These cutoffs leave the prokaryotes Porphyromonas gingivalis and Deinococcus radiodurans below trusted but above noise. Multiple alignments including these last two species exhibit sequence divergence which may suggest a subtly different function for these prokaryotic proteins.
Probab=99.97 E-value=5.9e-31 Score=267.34 Aligned_cols=154 Identities=23% Similarity=0.245 Sum_probs=123.0
Q ss_pred cccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCC
Q 045990 16 IYGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVI 95 (298)
Q Consensus 16 ~~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~ 95 (298)
..|++|||||||||||+++++|++..+++ +..+.+.++.++++|++.||++..+ ++||+ |+
T Consensus 421 R~G~~VEInALwYnAL~~~a~la~~~g~~---a~~y~~~A~~lk~~F~~~FW~~~~g--~l~D~--------------v~ 481 (575)
T TIGR01561 421 RAGAACEINALWYNALKTAEFLGNELGED---AESLEEKAAGVAKNFAEKFINPDGN--CLFDL--------------IH 481 (575)
T ss_pred CCCccHHHHHHHHHHHHHHHHHHHHhCcc---HHHHHHHHHHHHHHHHHhcCCCCCC--eeEEE--------------Ee
Confidence 58999999999999999999999885443 3456677788899999999997322 23333 11
Q ss_pred CCCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHH-HHHHHHHHHHHHHHHhhcCCCCccccCCcc
Q 045990 96 PDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPE-QSMAIMDLIEARWEELVGEMPLKIAYPAIE 174 (298)
Q Consensus 96 ~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~e-q~~~Vv~~v~~~~~~Llt~~gLrsl~Pp~~ 174 (298)
.|... ...-...+||||+ ++ ++|++++++++ ++++|+++|++ +|+||+|||||+| .
T Consensus 482 ~d~~~----------~~~~d~s~RPNql----~A----~sL~~~ll~~~~~~~~vl~~v~~---~Lltp~GlRTLsp--~ 538 (575)
T TIGR01561 482 QDEAG----------NQVKDKAIRPNQI----FA----ISLPFPIIDDESIAKAILDLIEK---DLLRPFGLKSLSR--D 538 (575)
T ss_pred cCCCC----------CcccccccCCCce----eH----hhCCCCCCCHHHHHHHHHHHHHh---hccCCcccccCCC--C
Confidence 11100 0011245667764 44 58999999999 99999999964 9999999999999 9
Q ss_pred CCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHH
Q 045990 175 SHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACI 211 (298)
Q Consensus 175 d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~ 211 (298)
|+.|+|+|.|++..|+.+|||||||||++|+|++|++
T Consensus 539 d~~Y~p~Y~g~~~~Rd~aYHqGtvWpwl~G~y~~A~l 575 (575)
T TIGR01561 539 DPLYKGQYKGDALSRDTAYHNGSLPPWLHGALVKARL 575 (575)
T ss_pred CCCcCCCCCCCccccCCcCcCCCcCccchhhHHhhcC
Confidence 9999999999999999999999999999999999863
No 8
>COG3408 GDB1 Glycogen debranching enzyme [Carbohydrate transport and metabolism]
Probab=99.97 E-value=1e-29 Score=261.08 Aligned_cols=195 Identities=25% Similarity=0.339 Sum_probs=142.5
Q ss_pred CCcccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhcc
Q 045990 14 LGIYGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFN 93 (298)
Q Consensus 14 ~~~~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~ 93 (298)
|+..|+|||||||||+||+++..++..++ +.+.++.+.+++..++++|.+.||++ .. +|+ .+....+
T Consensus 410 ~~~~g~pi~i~al~~~~~~a~~~~a~ll~-~~~~~~~~~~~a~~l~~~F~~~fw~~-~~---f~d--------l~~~~~~ 476 (641)
T COG3408 410 TPRAGKPVAINALQYYALKAALRLANLLG-DEEDAARLEKIARRLKESFEAKFWNP-TG---FYD--------LALDDKD 476 (641)
T ss_pred cCCCCCceeHHHHHHHHHHHHHHHHHHhc-ccccHHHHHHHHHHHHHHHHHHhhCc-cc---hHh--------hhccCCC
Confidence 33499999999999999999999999866 44455666677777799999999996 22 222 2222110
Q ss_pred CCCCCCCccccccccCCCCceeccccCCCcccchhcccchhh-hhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 045990 94 VIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVA-ILSSLATPEQSMAIMDLIEARWEELVGEMPLKIAYPA 172 (298)
Q Consensus 94 i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~La-L~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp 172 (298)
-.++|+.. |.+. ++.++.+++. +.|++.+++ +|+||+||||++|
T Consensus 477 ----------------------~~~r~~~~--------~a~~l~~~gi~~~~~-~~~~~l~e~---~lltp~GlRTLS~- 521 (641)
T COG3408 477 ----------------------VPIRPNFS--------NAIHLLYTGIVDPER-AVIIRLAEE---DLLTPWGLRTLSP- 521 (641)
T ss_pred ----------------------cccCccce--------ecccccccccCchHH-HHHHHHHHH---hccCCccccccCC-
Confidence 12334432 1133 4455555544 477788865 9999999999999
Q ss_pred ccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHH-HHHHHHHHHHHHHccCCCcceeeCCCCC-cCCcc
Q 045990 173 IESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQ-IARRAIDLAEARMLKDCWPEYYDGKLGR-YIGKQ 250 (298)
Q Consensus 173 ~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~-~A~~ll~~~~~~l~~~g~~E~FDg~tg~-~~G~~ 250 (298)
.||.|.|+| |||||||||++|.|+.|+.|+|..+ .+.++.+.+...-.-.++||+|||.++. |.|
T Consensus 522 -~dp~Y~p~y----------YH~GtVWP~~~gifv~g~~r~G~~~~~~~~~~~~~~~~a~~~~~pE~f~g~~~~~P~g-- 588 (641)
T COG3408 522 -DDPRYNPMY----------YHNGTVWPHDTGIFVLGLRRYGLKDIQALELFDGLFSSASPGRIPELFDGDSPNRPKG-- 588 (641)
T ss_pred -CCCCcCCCc----------ccCCCcccchHHHHHHHHHHcCcccHHHHHHHHHHhhhcccCCCcccccccCCCCCCC--
Confidence 877777765 9999999999999999999999766 5555555544443444589999998765 888
Q ss_pred cchhhHHHHHHHHH-HHH-hhc
Q 045990 251 ARKYQTWSIAGYLV-AKM-MLE 270 (298)
Q Consensus 251 a~~~QAWSaA~~Lr-~~~-~l~ 270 (298)
|..||||+|++|+ ..+ +|.
T Consensus 589 -c~~QAWS~a~~l~~~~~~~lg 609 (641)
T COG3408 589 -CYPQAWSSAEILRSLLQGLLG 609 (641)
T ss_pred -cchhhhhHHHHHHHHHHHHhC
Confidence 8899999999999 443 554
No 9
>PRK10137 alpha-glucosidase; Provisional
Probab=99.90 E-value=5e-23 Score=214.55 Aligned_cols=201 Identities=14% Similarity=0.082 Sum_probs=155.0
Q ss_pred eeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCCCCC
Q 045990 20 PIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDSI 99 (298)
Q Consensus 20 ~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~~~i 99 (298)
+|++|++.|.|.+.+++|++.+ ++.+.+.++.++++.|++.|++.||.+..++.+=|+..+++.. +.
T Consensus 577 ~VDLNsyLy~a~~~LA~LAe~L-G~~e~A~~~~~~A~~Lr~aIn~~~WDee~GfY~DydL~~~~~~----~~-------- 643 (786)
T PRK10137 577 SVDQASYMYSDNHYLAEMATIL-GKPEEAKRYRQLAQQLADYINTCMFDETTGFYYDVRIEDKPLA----NG-------- 643 (786)
T ss_pred CHHHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHccCCcCCeEEEEecCccccc----cc--------
Confidence 7899999999999999999984 6667788899999999999999999986664322222111000 00
Q ss_pred CccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCccccCCccCCCcc
Q 045990 100 PDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLKIAYPAIESHEWR 179 (298)
Q Consensus 100 p~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp~~d~~y~ 179 (298)
..|-+ ...+-+..+++++|++|+++++|+++|++++.. -..+.+++|++|+++ .
T Consensus 644 ----------~~g~~--------i~~~~~~~agf~PLwaGia~~eqA~~VV~~L~~-p~~F~t~~GipTlS~--s----- 697 (786)
T PRK10137 644 ----------CAGKP--------IVERGKGPEGWSPLFNGAATQANADAVVKVMLD-PKEFNTFVPLGTAAL--T----- 697 (786)
T ss_pred ----------ccCcc--------eeeeccCccchhhccCCCCCHHHHHHHHHHhcC-hhhcCCCCCccCcCC--C-----
Confidence 00111 111224456778999999999999999999863 124556789999888 4
Q ss_pred eeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHH----HHccCCCcceeeCCCCCcCCcccchhh
Q 045990 180 IVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEA----RMLKDCWPEYYDGKLGRYIGKQARKYQ 255 (298)
Q Consensus 180 ~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~----~l~~~g~~E~FDg~tg~~~G~~a~~~Q 255 (298)
++.+.|..||||+|||.++|+++.|+.++|+.++|+++...+.+ ..+..+|.|+||+.||++.|+. .|
T Consensus 698 -----~p~ydp~~YWRGpVWpp~N~Li~~GL~rYG~~e~A~~La~~ll~~a~~l~~tG~~~E~YDp~TGeg~Ga~---~F 769 (786)
T PRK10137 698 -----NPAFGADIYWRGRVWVDQFYFGLKGMERYGYRDDALKLADTFFRHAKGLTADGPIQENYNPLTGAQQGAP---NF 769 (786)
T ss_pred -----ccccCCCCCCCCCcCHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhcCceEEeECCCCCcccCCC---CC
Confidence 34556668999999999999999999999999999998876554 3456679999999999999977 99
Q ss_pred HHHHHHHHHHHH
Q 045990 256 TWSIAGYLVAKM 267 (298)
Q Consensus 256 AWSaA~~Lr~~~ 267 (298)
+||+|.+|.+..
T Consensus 770 SWTAAvlLml~~ 781 (786)
T PRK10137 770 SWSAAHLYMLYN 781 (786)
T ss_pred ChHHHHHHHHHH
Confidence 999999888774
No 10
>PRK13271 treA trehalase; Provisional
Probab=99.84 E-value=6.1e-20 Score=186.52 Aligned_cols=192 Identities=14% Similarity=0.129 Sum_probs=151.8
Q ss_pred ceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCCCC
Q 045990 19 YPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDS 98 (298)
Q Consensus 19 ~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~~~ 98 (298)
.||++|||||++.+.++++++.+ ++.+.+.++.++++.+++.|++.||.+..+ ..|||
T Consensus 337 iPVDLNALLy~ae~~LA~la~~l-Gd~~~A~~y~~~A~~rr~AI~~~LWnee~G--~f~DY------------------- 394 (569)
T PRK13271 337 VPVDLNALMFKMEKILARASKAA-GDNAMANQYETLANARQKAIEKYLWNDKEG--WYADY------------------- 394 (569)
T ss_pred cCchHHHHHHHHHHHHHHHHHHh-CChhhHHHHHHHHHHHHHHHHHhcccCCCC--EEEEE-------------------
Confidence 68999999999999999999984 566677788889999999999999986322 23333
Q ss_pred CCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCccccCCccCCCc
Q 045990 99 IPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLKIAYPAIESHEW 178 (298)
Q Consensus 99 ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp~~d~~y 178 (298)
.--++--...++..|+++|.+|+++++|+++|++.+++ +++++.|++|..|
T Consensus 395 -------------------Dl~~~~~r~~~saa~f~PLwag~a~~~qA~~Vv~~l~~---~Ll~pgGLpTt~~------- 445 (569)
T PRK13271 395 -------------------DLKSHKVRNQLTAAALFPLYVNAAAKDRANKVAAATKT---HLLQPGGLNTTSV------- 445 (569)
T ss_pred -------------------ECCCCCEeechhHHHHHhhhcCCCCHHHHHHHHHHHHH---hcCCCCCccCCCC-------
Confidence 22111101126778899999999999999999999854 7889999988776
Q ss_pred ceeccCCCCCCCCccccCCc-hhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHH-----ccCCCcceeeC-CCCCcCCcc-
Q 045990 179 RIVTGCDPKNTRWSYHNGGS-WPVLLWMLTAACIKTGRPQIARRAIDLAEARM-----LKDCWPEYYDG-KLGRYIGKQ- 250 (298)
Q Consensus 179 ~~~~~gd~~~rp~aYHnG~v-WP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l-----~~~g~~E~FDg-~tg~~~G~~- 250 (298)
.+..||+||+ ||-++|++++|+.++|..++|+++.....+.. .+.++.|+||. .+|.+.|++
T Consensus 446 ----------~SgqQWD~PngWaPlq~iiieGL~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd~~~~G~~gGGGe 515 (569)
T PRK13271 446 ----------KSGQQWDAPNGWAPLQWVATEGLQNYGQKEVAMDVTWRFLTNVQHTYDREKKLVEKYDVSSTGTGGGGGE 515 (569)
T ss_pred ----------CCCCCCcCcccCHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHhcccCceEEeeCCCCCCCCCCCCC
Confidence 2247999999 99999999999999999999998877655544 35559999998 467665544
Q ss_pred --cchhhHHHHHHHHHHHHhhcC
Q 045990 251 --ARKYQTWSIAGYLVAKMMLED 271 (298)
Q Consensus 251 --a~~~QAWSaA~~Lr~~~~l~~ 271 (298)
....|.||.|.+|-.......
T Consensus 516 Y~~q~GFGWTNgV~L~lL~~~~~ 538 (569)
T PRK13271 516 YPLQDGFGWTNGVTLKMLDLICP 538 (569)
T ss_pred CCCCCCcCcHHHHHHHHHHhcCc
Confidence 456899999999988876543
No 11
>PRK13272 treA trehalase; Provisional
Probab=99.71 E-value=3e-16 Score=158.70 Aligned_cols=191 Identities=12% Similarity=0.112 Sum_probs=145.5
Q ss_pred ceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCCCC
Q 045990 19 YPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDS 98 (298)
Q Consensus 19 ~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~~~ 98 (298)
-||..|||.|.+-+.++++++. .++.+.+.++.++++.+++.|.+.+|.+ .+ ..|||+
T Consensus 338 vpVDLNalL~~~e~~LA~~~~~-lG~~~~a~~~~~~A~~r~~aI~~~lWde-~G--~~~DYD------------------ 395 (542)
T PRK13272 338 VPVDLNSLLYHLERTLAQACAS-SGLAACSQDYAALAQQRKQAIDAHLWNP-AG--YYADYD------------------ 395 (542)
T ss_pred cCccHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHhccCc-Cc--eEEeec------------------
Confidence 4899999999999999999998 4566677888899999999999999985 33 344441
Q ss_pred CCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCccccCCccCCCc
Q 045990 99 IPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLKIAYPAIESHEW 178 (298)
Q Consensus 99 ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp~~d~~y 178 (298)
.....+.+ .++.+|+++|.+|+++++|++++++.++. .++.+.|+-|..|
T Consensus 396 ------------------~~~~~~~~--~~s~a~f~PLwag~a~~~~a~~l~~~l~~---~~l~~gGlpTt~~------- 445 (542)
T PRK13272 396 ------------------WQTRTLSE--QVTAAALYPLFAGLASDDRAKRTADSVRA---QLLRPGGLATTAL------- 445 (542)
T ss_pred ------------------cCCCCccc--cccHHHHHHHHcCCCCHHHHHHHHHHHHH---hccCCCCcCCCCC-------
Confidence 00011111 27789999999999999999999998864 5667777654444
Q ss_pred ceeccCCCCCCCCccccCC-chhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHc-----cCCCcceeeCCC-CCcCCcc-
Q 045990 179 RIVTGCDPKNTRWSYHNGG-SWPVLLWMLTAACIKTGRPQIARRAIDLAEARML-----KDCWPEYYDGKL-GRYIGKQ- 250 (298)
Q Consensus 179 ~~~~~gd~~~rp~aYHnG~-vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~-----~~g~~E~FDg~t-g~~~G~~- 250 (298)
.+..||+|| +||-++|++++|+.++|..++|+++.....+... +.++.|+||-.. +.+.|++
T Consensus 446 ----------~sgqQWD~PN~WaPlq~i~i~GL~~yG~~~lA~~La~rwl~~~~~~~~~~g~m~EKYdv~~~g~~GgGGE 515 (542)
T PRK13272 446 ----------KTGQQWDEPNGWAPLQWVAVDGLRRYGEDALARTIGERFLAQVQALFAREHKLVEKYGLDGNAAGGGGGE 515 (542)
T ss_pred ----------CccccCCCCCccHhHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcCceeEEeecCCCCCCCCCCC
Confidence 335799999 9999999999999999999999998887666554 566999999532 1111111
Q ss_pred --cchhhHHHHHHHHHHHHhhcC
Q 045990 251 --ARKYQTWSIAGYLVAKMMLED 271 (298)
Q Consensus 251 --a~~~QAWSaA~~Lr~~~~l~~ 271 (298)
....|.||.|.+|........
T Consensus 516 Y~~Q~GFGWTNgV~L~lL~~yg~ 538 (542)
T PRK13272 516 YALQDGFGWTNGVTLMLLNLYPP 538 (542)
T ss_pred cCCCCCCCCHHHHHHHHHHHhcc
Confidence 345899999999988765543
No 12
>PRK13270 treF trehalase; Provisional
Probab=99.70 E-value=4.1e-16 Score=158.04 Aligned_cols=190 Identities=13% Similarity=0.131 Sum_probs=145.3
Q ss_pred ceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCCCC
Q 045990 19 YPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDS 98 (298)
Q Consensus 19 ~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~~~ 98 (298)
.||..||+.|.+-+.++++++. .++.+.+.++.++++.+++.|.+.+|.+..+. .|||+
T Consensus 347 ipVDLNaiL~~~e~~LA~~a~~-lG~~~~a~~~~~~A~~r~~AI~~~LWnee~G~--~~DYD------------------ 405 (549)
T PRK13270 347 IPIDLNAFLYKLESAIANISAL-KGEKETEALFRQKASARRDAVNRYLWDDENGI--YRDYD------------------ 405 (549)
T ss_pred chhhHHHHHHHHHHHHHHHHHH-hCChHHHHHHHHHHHHHHHHHHHhccCcccCe--EEecc------------------
Confidence 5889999999999999999998 46667788899999999999999999864442 33331
Q ss_pred CCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCccccCCccCCCc
Q 045990 99 IPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLKIAYPAIESHEW 178 (298)
Q Consensus 99 ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp~~d~~y 178 (298)
+.-+.. ..++.+|+++|.+|+++++|++++++.++. .++.+.|+-+.
T Consensus 406 -------------------~~~~~~--~~~s~a~f~PLwaG~a~~~qa~~l~~~l~~---~ll~pGGl~tS--------- 452 (549)
T PRK13270 406 -------------------WRREQL--ALFSAAAIVPLYVGMANHEQADRLANAVRS---RLLTPGGILAS--------- 452 (549)
T ss_pred -------------------cccCcc--ccccHHHHHHHHhCCCCHHHHHHHHHHHHH---hcccCCCcCCC---------
Confidence 111112 237889999999999999999999999854 56665554221
Q ss_pred ceeccCCCCCCCCccccCC-chhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHc-----cCCCcceeeCCCCCcCCc--c
Q 045990 179 RIVTGCDPKNTRWSYHNGG-SWPVLLWMLTAACIKTGRPQIARRAIDLAEARML-----KDCWPEYYDGKLGRYIGK--Q 250 (298)
Q Consensus 179 ~~~~~gd~~~rp~aYHnG~-vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~-----~~g~~E~FDg~tg~~~G~--~ 250 (298)
.+.+..||+|| +||-++|++++|+.++|..++|+++.....+... ..++.|+||..++.+.|+ +
T Consensus 453 --------~~~sgqQWD~PN~WaPlqwmiieGL~ryG~~~lA~~LA~rwl~~~~~~~~~~g~m~EKYdv~~~~g~~GgGG 524 (549)
T PRK13270 453 --------EYETGEQWDKPNGWAPLQWMAIQGFKMYGDDLLGDEIARSWLKTVNQFYQEHHKLIEKYHIAGGVPREGGGG 524 (549)
T ss_pred --------CCCCcccCCCCCCCccHHHHHHHHHHHcCCHHHHHHHHHHHHHHHHHHHhhcCeeEEEecCCCCCCCCCCCC
Confidence 23556899999 8999999999999999999999998877655544 456999999876432222 1
Q ss_pred ---cchhhHHHHHHHHHHHHhhc
Q 045990 251 ---ARKYQTWSIAGYLVAKMMLE 270 (298)
Q Consensus 251 ---a~~~QAWSaA~~Lr~~~~l~ 270 (298)
....|.||.|.+|.+....-
T Consensus 525 EY~~q~GFGWTNGV~l~~l~~yg 547 (549)
T PRK13270 525 EYPLQDGFGWTNGVVRRLIGLYG 547 (549)
T ss_pred CcCCCCCcCcHHHHHHHHHHHhC
Confidence 23589999999998876543
No 13
>PLN02567 alpha,alpha-trehalase
Probab=99.66 E-value=3.5e-15 Score=151.90 Aligned_cols=207 Identities=14% Similarity=0.126 Sum_probs=145.0
Q ss_pred ceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhccccccccc--ccchhhhHhhhccCCC
Q 045990 19 YPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYK--TEEYSHTAVNKFNVIP 96 (298)
Q Consensus 19 ~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~--~e~~~~~a~n~~~i~~ 96 (298)
.||..||+.|.+-+.+++|++.+ ++.+.+.+..+++..+++.|++.+|.+..+. .|||. +++-. ++
T Consensus 326 ~pVDLNa~L~~~e~~LA~la~~l-G~~~~a~~~~~~A~~~~~aI~~~lWdee~G~--y~Dydl~~~~~~----~~----- 393 (554)
T PLN02567 326 LPVDLNAFLLKMELDIAFFAKLL-GDKATAERFLKAAKARKRAINAVLWNEEMGQ--WLDYWLPPNGAT----CQ----- 393 (554)
T ss_pred cCccHHHHHHHHHHHHHHHHHHh-CChHHHHHHHHHHHHHHHHHHHHhcCcccCe--EEeecccccccc----cc-----
Confidence 47999999999999999999984 5556778888999999999999999986664 44442 21000 00
Q ss_pred CCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHH--HHHHHHHHHHHHHHHhhcCCCCccccCCcc
Q 045990 97 DSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPE--QSMAIMDLIEARWEELVGEMPLKIAYPAIE 174 (298)
Q Consensus 97 ~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~e--q~~~Vv~~v~~~~~~Llt~~gLrsl~Pp~~ 174 (298)
....+.+.... ..+..+|+++|.+++++++ ++++|++.++. ..++.+.|+.|.
T Consensus 394 -----------------~~~~~~~~~~~-~~~~~s~f~PLw~g~~~~~~~~a~~v~~~l~~--~~l~~pgGipts----- 448 (554)
T PLN02567 394 -----------------ESYTWDAENQN-TNVYASNFVPLWCGVVPPGDAKVEKVVESLKS--SGLVLPAGIATS----- 448 (554)
T ss_pred -----------------ccccccccccc-cCccHHHHHHHHcCCCChhhHHHHHHHHHHHh--ccCccCCcccCC-----
Confidence 00000111111 2366789999999999986 57788888753 346667776431
Q ss_pred CCCcceeccCCCCCCCCccccCC-chhhhHHHHHHHHHHcCCHH---HHHHHHHH-----HHHHHccCCCcceeeCCCCC
Q 045990 175 SHEWRIVTGCDPKNTRWSYHNGG-SWPVLLWMLTAACIKTGRPQ---IARRAIDL-----AEARMLKDCWPEYYDGKLGR 245 (298)
Q Consensus 175 d~~y~~~~~gd~~~rp~aYHnG~-vWP~l~g~~~~Al~k~G~~~---~A~~ll~~-----~~~~l~~~g~~E~FDg~tg~ 245 (298)
-.++..||+|| +||-++|++++|+.++|..+ +|+++... ........++.|+||..++.
T Consensus 449 ------------l~~sg~qWdgPn~W~pl~~l~i~GL~~yG~~ea~~lA~~la~rwl~~~~~~~~~tg~m~EkYd~~~~~ 516 (554)
T PLN02567 449 ------------LRNTGQQWDFPNAWAPLQHMIVEGLAASGSKEGKALAEDIARRWLRSNYVAYKKTGAMHEKYDARYCG 516 (554)
T ss_pred ------------CCCccccCCCCCcCHhHHHHHHHHHHHcCChHHHHHHHHHHHHHHHHHHHHHHhcCceEEeECCCCcc
Confidence 12345799999 99999999999999999764 77775442 33334455699999998754
Q ss_pred cCCcc----cchhhHHHHHHHHHHHHhhcCCCc
Q 045990 246 YIGKQ----ARKYQTWSIAGYLVAKMMLEDPSH 274 (298)
Q Consensus 246 ~~G~~----a~~~QAWSaA~~Lr~~~~l~~~~~ 274 (298)
..|++ ....|.||+|.+|.+....-.|.+
T Consensus 517 ~~GgGGey~~q~GFGWTngV~L~ll~~yg~~~~ 549 (554)
T PLN02567 517 EVGGGGEYIPQTGFGWSNGVVLSLLEEFGWPED 549 (554)
T ss_pred ccCCCCCCCCCCCcChHHHHHHHHHHHhCCccc
Confidence 44432 235788999999988876665544
No 14
>KOG3625 consensus Alpha amylase [Carbohydrate transport and metabolism]
Probab=99.60 E-value=9.9e-15 Score=151.88 Aligned_cols=223 Identities=20% Similarity=0.267 Sum_probs=151.9
Q ss_pred ccceeehhHHHHHHHHHHHHhhhhc---------c--cChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchh
Q 045990 17 YGYPIEIQALFFMALRCALSLLKHD---------A--EGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYS 85 (298)
Q Consensus 17 ~G~~vEinALwYnAL~~~~~l~~~~---------~--~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~ 85 (298)
+|..||||+|-|.|||++.+|.+.. . ++. ..-.+.+....+++.|.+.|.++.+--. ..+=+
T Consensus 1264 DGsAVEi~GL~~salrfl~elkek~ifpy~~Ve~k~~g~~-~k~s~~eW~qkiqdNFeK~ffV~ed~s~------~~~~~ 1336 (1521)
T KOG3625|consen 1264 DGSAVEIVGLSKSALRFLLELKEKNIFPYHGVEVKRHGKA-IKWSYDEWNQKIQDNFEKLFFVSEDPSD------LNEKH 1336 (1521)
T ss_pred CCceeehhhhHHHHHHHHHHHHhcCCccccceEEeccccc-ceecHHHHHHHHHhhhhheecccCCcch------hhhhc
Confidence 6899999999999999999998761 0 111 1112445556679999999988543311 11224
Q ss_pred hhHhhhccCCCCCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCC
Q 045990 86 HTAVNKFNVIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMP 165 (298)
Q Consensus 86 ~~a~n~~~i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~g 165 (298)
....|+..||-||.-. ..+|-.--+||| |+. .+.+--.+.+++.+-+-++..++ .|++|+|
T Consensus 1337 ~~~vnkr~IykDsyga--------t~~~tDyQLR~N------F~I--amtVAPeL~~pe~A~kAle~Aek---vLlGPlG 1397 (1521)
T KOG3625|consen 1337 PNLVNKRGIYKDSYGA--------TSPWTDYQLRPN------FTI--AMTVAPELFTPEKAWKALEIAEK---VLLGPLG 1397 (1521)
T ss_pred ccccchhheecccccC--------CCCccceeccCC------cee--EEEechhhcChHHHHHHHHHHHH---HhcCccc
Confidence 5567999998876433 122222234455 221 13444456677777777787764 7999999
Q ss_pred CccccCCccCCCcceeccCCCCCCC------CccccCCchhhhHHHHHHHHHHcCC----HHHHHHH------HHHHHHH
Q 045990 166 LKIAYPAIESHEWRIVTGCDPKNTR------WSYHNGGSWPVLLWMLTAACIKTGR----PQIARRA------IDLAEAR 229 (298)
Q Consensus 166 Lrsl~Pp~~d~~y~~~~~gd~~~rp------~aYHnG~vWP~l~g~~~~Al~k~G~----~~~A~~l------l~~~~~~ 229 (298)
|||+.| .|=.|+++|--+..+.+ +.|||||-|-|+.|+|..|-+..++ ...+..+ |.....+
T Consensus 1398 MkTlDP--~D~nYr~yYdN~~Ds~d~~takG~NYHQGPEWlw~~GyfLrArl~f~~k~gp~~~~y~i~qv~~rL~~h~k~ 1475 (1521)
T KOG3625|consen 1398 MKTLDP--DDWNYRGYYDNALDSDDYNTAKGFNYHQGPEWLWPIGYFLRARLYFSRKMGPETTAYTIVQVKNRLSRHYKH 1475 (1521)
T ss_pred ccccCh--hhcccccccCCCccccchhhhccccccCCCceeehhHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHH
Confidence 999999 99999999866555543 5699999999999999999888542 2223222 2233344
Q ss_pred HccC---CCcceeeCCCCCcCCcccchhhHHHHHHHHHHHHhh
Q 045990 230 MLKD---CWPEYYDGKLGRYIGKQARKYQTWSIAGYLVAKMML 269 (298)
Q Consensus 230 l~~~---g~~E~FDg~tg~~~G~~a~~~QAWSaA~~Lr~~~~l 269 (298)
+..+ |++|+=+. +|++++-. |..||||+|.+|-+..-|
T Consensus 1476 l~~S~WrgLpELTN~-ngeyC~dS-c~tQAWSvacile~~ydL 1516 (1521)
T KOG3625|consen 1476 LERSPWRGLPELTNE-NGEYCPDS-CETQAWSVACILETLYDL 1516 (1521)
T ss_pred HhhccccCchhhccC-CcCccccc-chHhHHHHHHHHHHHHHH
Confidence 5544 48998653 56888865 999999999999887644
No 15
>PF01204 Trehalase: Trehalase; InterPro: IPR001661 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 37 GH37 from CAZY comprises enzymes with only one known activity; trehalase (3.2.1.28 from EC). Trehalase is the enzyme responsible for the degradation of the disaccharide alpha,alpha-trehalose yielding two glucose subunits []. It is an enzyme found in a wide variety of organisms and whose sequence has been highly conserved throughout evolution.; GO: 0004555 alpha,alpha-trehalase activity, 0005991 trehalose metabolic process; PDB: 2JJB_B 2WYN_B 2JG0_A 2JF4_A 3C67_A 3D3I_B 3C69_A 3C68_A 2Z07_B.
Probab=99.59 E-value=6e-14 Score=141.78 Aligned_cols=195 Identities=18% Similarity=0.219 Sum_probs=135.0
Q ss_pred ceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCCCC
Q 045990 19 YPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDS 98 (298)
Q Consensus 19 ~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~~~ 98 (298)
-||..||+.|.+.+.++++++. .++.+.+....+++..+++.|++.||.+.++. .|||+.
T Consensus 305 ipVDLNa~L~~~e~~LA~~a~~-lG~~~~a~~~~~~A~~~~~aI~~~lWdee~g~--~~Dyd~----------------- 364 (512)
T PF01204_consen 305 IPVDLNAILYRNEKDLAEFAEL-LGDQEKAEEYRQRAEERKEAINQYLWDEEDGF--YYDYDL----------------- 364 (512)
T ss_dssp E-HHHHHHHHHHHHHHHHHHHH-TT-HHHHHHHHHHHHHHHHHHHHHTEETTTTE--E--EET-----------------
T ss_pred cCchHHHHHHHHHHHHHHHHHH-cCchhHHHHHHHHHHHHHHHHHHhCccCCCCe--EEeeeC-----------------
Confidence 4899999999999999999999 57778889999999999999999999986553 444411
Q ss_pred CCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCccccCCccCCCc
Q 045990 99 IPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLKIAYPAIESHEW 178 (298)
Q Consensus 99 ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp~~d~~y 178 (298)
..+.....++..|+++|.+++++++|++++++.+.. .+.+...+.. |. +
T Consensus 365 ---------------------~~~~~~~~~~~a~f~PL~ag~a~~~qa~~~~~~~l~---~~~~~~~l~~--~~--g--- 413 (512)
T PF01204_consen 365 ---------------------RTGKRSPVFSPANFLPLWAGIASPEQAERLVARALD---YLERSGLLTF--PG--G--- 413 (512)
T ss_dssp ---------------------TTTEEGG--BGGGGHHHHTT-S-HHHHHHHHHHHHH---HCTTCCSSC---CS--E---
T ss_pred ---------------------CCCCCcccccHHHHHHHHHhhcCHhhhhhHHHHHHH---HHHhcCCccc--CC--C---
Confidence 111111237788999999999999998888877643 3333333221 21 0
Q ss_pred ceeccCCCCCCCCccccCC-chhhhHHHHHHHHHHcCCHHHHHHHHHHHHHH----HccCC-CcceeeCCC-CCcC-Ccc
Q 045990 179 RIVTGCDPKNTRWSYHNGG-SWPVLLWMLTAACIKTGRPQIARRAIDLAEAR----MLKDC-WPEYYDGKL-GRYI-GKQ 250 (298)
Q Consensus 179 ~~~~~gd~~~rp~aYHnG~-vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~----l~~~g-~~E~FDg~t-g~~~-G~~ 250 (298)
.-.....+..||+|| +||-++++.++|+.++|..++|+++.....+. +.+.| +.|.||..+ +... |++
T Consensus 414 ----~~ts~~~~~~qWD~Pn~WaPlq~~~i~GL~~yG~~~lA~~la~rwl~~~~~~~~~~g~m~EKYd~~~~~~~gg~gG 489 (512)
T PF01204_consen 414 ----IPTSLYDTGQQWDGPNVWAPLQWMAIEGLRRYGYRELARRLAQRWLRLNYKVFKRTGKMFEKYDVEDGGEPGGGGG 489 (512)
T ss_dssp ----CTTCTTTTTSTTSTTEEEHHHHHHHHHHHHHTT-HHHHHHHHHHHHHHHHHCCCCCSSEBSEEETTTTSCEC-S-S
T ss_pred ----CCCccccccccCCCCCccHhHHHHHHHHHHhCCcHHHHHHHHHHHHHHHHHHHhhcCchhccccceeccccCCCCC
Confidence 112234488999999 79999999999999999999999888765544 33445 999999874 3322 222
Q ss_pred ---cchhhHHHHHHHHHHHHh
Q 045990 251 ---ARKYQTWSIAGYLVAKMM 268 (298)
Q Consensus 251 ---a~~~QAWSaA~~Lr~~~~ 268 (298)
....|.||.|.+|.....
T Consensus 490 eY~~q~GFGWTNgv~l~~l~~ 510 (512)
T PF01204_consen 490 EYPVQDGFGWTNGVYLDLLDK 510 (512)
T ss_dssp SS---BS-HHHHHHHHHHHHH
T ss_pred cccCCCCCccHHHHHHHHHHh
Confidence 346899999999987754
No 16
>PF03200 Glyco_hydro_63: Mannosyl oligosaccharide glucosidase; InterPro: IPR004888 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is a family of eukaryotic enzymes belonging to glycosyl hydrolase family 63 (GH63 from CAZY). They catalyse the specific cleavage of the non-reducing terminal glucose residue from Glc(3)Man(9)GlcNAc(2). Mannosyl oligosaccharide glucosidase 3.2.1.106 from EC is the first enzyme in the N-linked oligosaccharide processing pathway. ; GO: 0004573 mannosyl-oligosaccharide glucosidase activity, 0009311 oligosaccharide metabolic process
Probab=99.50 E-value=2.8e-13 Score=143.12 Aligned_cols=234 Identities=14% Similarity=0.147 Sum_probs=142.6
Q ss_pred CCCceeeecccCCcccceee----hhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhccccccc
Q 045990 3 SGLDVHVSCENLGIYGYPIE----IQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYR 78 (298)
Q Consensus 3 ~~~~~~~~~~~~~~~G~~vE----inALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~ 78 (298)
|||| |.|=....+.-| -.+--+-+-+.+++++..++..... .+..+....+++.+.+.-|.+.++. .||
T Consensus 540 SGlD----DYPRa~~p~~~e~hvDl~sWMa~~a~~M~~IA~~L~~~d~~-~ef~~~~~~i~~~l~~~hWdeedgf--YyD 612 (801)
T PF03200_consen 540 SGLD----DYPRASHPSDSERHVDLTSWMAFFALNMARIALELGKEDDA-YEFFEHFEYISDALNKLHWDEEDGF--YYD 612 (801)
T ss_pred CCCC----CCCCCCCCCccceechHHHHHHHHHHHHHHHHHHhcCcccH-HHHHHHHHHHHHHHHHhcCCcccCc--eee
Confidence 5555 555544444444 4455566677788888775544433 3366778888999999999987775 444
Q ss_pred cc--ccchhhhHhhhccCCCC-CCCccccccc-cCCCCceeccccCCCcccchhcccchhhhhcCCCCH--HHHHHHHHH
Q 045990 79 YK--TEEYSHTAVNKFNVIPD-SIPDWVFDFM-PIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATP--EQSMAIMDL 152 (298)
Q Consensus 79 ~~--~e~~~~~a~n~~~i~~~-~ip~~l~~~~-~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~--eq~~~Vv~~ 152 (298)
+. ++ ...+......+. ..+.=+.++. ....-.++.. +...+..+++.+++++ ++.++|++.
T Consensus 613 ~~~~~~---~v~l~~~~~~~~~~~~~~~~r~~~~~~~~~~v~~----------~Gyvsl~Plll~ll~~ds~~L~~~L~~ 679 (801)
T PF03200_consen 613 VGLHPD---AVRLEWKEVLENGQFRRELVRVVRGEPQLQLVCH----------FGYVSLFPLLLGLLPPDSERLERLLER 679 (801)
T ss_pred eccccc---cceecccccccccccchhheecccCCccccceee----------ecccCCCchhhccCCCCHHHHHHHHHH
Confidence 42 21 000011000000 0000001111 0000111111 2222445788888876 477889998
Q ss_pred HHHHHHHhhcCCCCccccCCccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCC-----HHHHHH------
Q 045990 153 IEARWEELVGEMPLKIAYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGR-----PQIARR------ 221 (298)
Q Consensus 153 v~~~~~~Llt~~gLrsl~Pp~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~-----~~~A~~------ 221 (298)
+.. -.++.+++|+||++. .|+-|.. +....+-+|||||||..+|+++++|+.+++. .+.|.+
T Consensus 680 l~D-~~ef~s~yGirSLSk--~~~~y~~----~~~e~d~~YWRGpIW~~~NyL~i~aL~~y~~~~g~~~~~a~~~y~~Lr 752 (801)
T PF03200_consen 680 LLD-EDEFWSPYGIRSLSK--SDPFYGP----GENEHDPSYWRGPIWIPINYLLIEALRRYGYYYGPYQERAKEIYKELR 752 (801)
T ss_pred hcC-hhhccCCCCCccccC--CCccccc----cCCccCCCcccCccchhhHHHHHHHHHHHhccCchHHHHHHHHHHHHH
Confidence 863 258999999999999 7765543 2223355899999999999999999999873 233332
Q ss_pred --HHHHHHHHHccCC-CcceeeCCCCCcCCcccchhhH-HHHHHHHHHH
Q 045990 222 --AIDLAEARMLKDC-WPEYYDGKLGRYIGKQARKYQT-WSIAGYLVAK 266 (298)
Q Consensus 222 --ll~~~~~~l~~~g-~~E~FDg~tg~~~G~~a~~~QA-WSaA~~Lr~~ 266 (298)
++..+.+.....| +.|+||+.||++.|.. .|+ ||+..++.+.
T Consensus 753 ~nli~nv~~~~~~tg~~~E~Y~~~tG~g~g~~---~FtGWtslv~~im~ 798 (801)
T PF03200_consen 753 KNLINNVYKEYKRTGYFWEQYNPETGRGQGAH---PFTGWTSLVVLIMA 798 (801)
T ss_pred HHHHHHHHHHHhhcccEEEeECCCCCcccCCC---CCCchHHHHHHHHh
Confidence 2223334455666 8999999999999955 998 9998876553
No 17
>TIGR01577 oligosac_amyl oligosaccharide amylase. The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (PubMed: 11549021), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Probab=99.49 E-value=4.8e-13 Score=137.61 Aligned_cols=190 Identities=17% Similarity=0.185 Sum_probs=134.0
Q ss_pred ccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCC
Q 045990 17 YGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIP 96 (298)
Q Consensus 17 ~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~ 96 (298)
.|+.++.+|++|.||+.+++|++.+ ++.+.+....+.++.+++.|+++||.+.
T Consensus 409 ~G~~~~t~a~~~aAL~~aa~lA~~l-Gd~~~a~~~~~~Ad~ik~~i~~~~w~~~-------------------------- 461 (616)
T TIGR01577 409 EGVFTYTASAVYGGLDAAAAVADKL-GEKRLAQNWKKAAEFIKRAVEERFWLPE-------------------------- 461 (616)
T ss_pred CCccCccHHHHHHHHHHHHHHHHHc-CChHHHHHHHHHHHHHHHHHHHhccCCC--------------------------
Confidence 4889999999999999999999984 5556677888888888999999998852
Q ss_pred CCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHH--HHHHHHHHHHhhcCCCCccccCCcc
Q 045990 97 DSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAI--MDLIEARWEELVGEMPLKIAYPAIE 174 (298)
Q Consensus 97 ~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~V--v~~v~~~~~~Llt~~gLrsl~Pp~~ 174 (298)
+|+++..+++...|...++.--.+++++|+++++..+.+ ++.|++ +|.+|.+
T Consensus 462 --------------~g~F~~~~~~~~~~~~vDaSlL~l~~~~g~l~~~Dpr~v~Tv~~I~~---~L~~~~~--------- 515 (616)
T TIGR01577 462 --------------RQVFAKGIKLMVLDKTIDISILGISVPFNLIAPDDERMVKMAEAIEK---HLTSPIV--------- 515 (616)
T ss_pred --------------CCEEEEeecCCCCCCcccHHHHhHHHhcCCCCCCChHHHHHHHHHHH---HhcccCC---------
Confidence 244444444222222223321124667898887765544 666654 5544321
Q ss_pred CCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHH-------------HHHHHHHHHHHHHccCC-Ccceee
Q 045990 175 SHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQ-------------IARRAIDLAEARMLKDC-WPEYYD 240 (298)
Q Consensus 175 d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~-------------~A~~ll~~~~~~l~~~g-~~E~FD 240 (298)
.++ .+|..| .|..|..|.-..-.+++++.+.|+.. .|+++++-+.++-...| +||=+|
T Consensus 516 -ggi-~RY~~D------~y~~g~~w~i~T~wla~~~~~~g~~~~~~~~~~~~~~~~~A~~ll~~~~~~~~~~Gll~Eqvd 587 (616)
T TIGR01577 516 -GGI-KRYEND------PYVGGNPWILTTLWLSQLYIKQGRILKALNHNGADIYLQKSKKLLKWVMDHRTDLGLLPEQVD 587 (616)
T ss_pred -Cee-eCCCCC------CCCCCCcHHHHHHHHHHHHHHhcccccccccchhhhHHHHHHHHHHHHHhcCCCCCCCccccC
Confidence 011 122222 46678888877888888889988654 77777777777766777 999999
Q ss_pred CCCCCcCCcccchhhHHHHHHHHHHHHhhc
Q 045990 241 GKLGRYIGKQARKYQTWSIAGYLVAKMMLE 270 (298)
Q Consensus 241 g~tg~~~G~~a~~~QAWSaA~~Lr~~~~l~ 270 (298)
+.+|.+.| +.+|+||-|+++.+...|.
T Consensus 588 ~~~g~~~g---~~Pl~wSHa~~i~a~~~l~ 614 (616)
T TIGR01577 588 KETGKPAW---AVPLGWSHAMFLLTVLDLD 614 (616)
T ss_pred CCCCCCCC---cCCcccchHHHHHHHHHHh
Confidence 99999999 4599999999988876554
No 18
>COG3387 SGA1 Glucoamylase and related glycosyl hydrolases [Carbohydrate transport and metabolism]
Probab=98.77 E-value=1.6e-07 Score=97.21 Aligned_cols=191 Identities=20% Similarity=0.245 Sum_probs=131.7
Q ss_pred cccCCcccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhh
Q 045990 11 CENLGIYGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVN 90 (298)
Q Consensus 11 ~~~~~~~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n 90 (298)
.-|+| +-.+..+.-|.||.+|++|++.. ++...++.+.+.+..+++.+.+.++...
T Consensus 409 Eer~g---~~~yt~~~~~agLd~A~~lA~~~-gd~~~a~~~~~~ad~ik~~v~~~~~~~~-------------------- 464 (612)
T COG3387 409 EERGG---HFTYTKATVYAGLDAAADLAEEF-GDKGSAEHWRKTADELKEAVLRRGYAED-------------------- 464 (612)
T ss_pred cccCC---cccchHHHHHHHHHHHHHHHHHh-CCcHHHHHHHHHHHHHHHHHHHhccccc--------------------
Confidence 34566 66677899999999999999994 5777888888888888888888775541
Q ss_pred hccCCCCCCCccccccccCCCCceeccccC--C-CcccchhcccchhhhhcCCCCH--HHHHHHHHHHHHHHHHhhcCCC
Q 045990 91 KFNVIPDSIPDWVFDFMPIRGGYFIGNVSP--A-RMDFRWFALGNCVAILSSLATP--EQSMAIMDLIEARWEELVGEMP 165 (298)
Q Consensus 91 ~~~i~~~~ip~~l~~~~~~~~gyl~~~v~p--~-~~d~~~~a~gN~LaL~~~ll~~--eq~~~Vv~~v~~~~~~Llt~~g 165 (298)
+||+.-.+.+ . .+|..+.. +.+ +|++++ .+.-..++.|++ +|..+.+
T Consensus 465 --------------------~~~f~r~~~~~~~~~vDasll~----l~~-fg~i~~~D~~~~~t~~~I~~---~L~~~~~ 516 (612)
T COG3387 465 --------------------GGYFVRSLGRKPDDTVDASLLG----LVL-FGFIPPDDPRILATVEAIER---ELLVDGG 516 (612)
T ss_pred --------------------CCeeehhcCCCccccccHHHhh----ccc-cCccCCCCHHHHHHHHHHHH---HHhhcCC
Confidence 2333333332 1 12332233 222 444443 344555566654 6665432
Q ss_pred -CccccCCccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCC-CcceeeCCC
Q 045990 166 -LKIAYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARMLKDC-WPEYYDGKL 243 (298)
Q Consensus 166 -Lrsl~Pp~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g-~~E~FDg~t 243 (298)
++ . |.. ...+...+= +..|+.+..-++..+...|+.+.|++++..++++-...| +||=+|..+
T Consensus 517 gi~---------R----Y~~-~~~d~~~~~-~~~w~i~t~Wl~~~~~~~g~~~~a~~ll~~l~~~a~~~gll~EQv~~~~ 581 (612)
T COG3387 517 GIR---------R----YNN-EYDDGLGGD-NGPWIITTLWLSEYYLALGRLDEAKKLLEWLLAFASPLGLLPEQVDDGS 581 (612)
T ss_pred cEE---------c----Ccc-ccccccCCC-CCcceeehhHHHHHHHHccchHHHHHHHHHHHHhcCCCCCcchhhcCCC
Confidence 21 1 221 001111111 258999999999999999999999999999888878888 899999999
Q ss_pred CCcCCcccchhhHHHHHHHHHHHHhhcC
Q 045990 244 GRYIGKQARKYQTWSIAGYLVAKMMLED 271 (298)
Q Consensus 244 g~~~G~~a~~~QAWSaA~~Lr~~~~l~~ 271 (298)
|++.|. .+|+||-|+++.+...+++
T Consensus 582 G~~~g~---~PlawSha~~I~ai~~l~~ 606 (612)
T COG3387 582 GEPLGA---FPLAWSHAEFIIAIRELEE 606 (612)
T ss_pred CccCCC---CcchhhhHHHHHHHHHHHh
Confidence 999984 4999999999999887765
No 19
>KOG2161 consensus Glucosidase I [Carbohydrate transport and metabolism]
Probab=98.77 E-value=1.3e-07 Score=98.02 Aligned_cols=222 Identities=17% Similarity=0.224 Sum_probs=122.6
Q ss_pred eeehhHHHHHHHHHHHHhhhhcccCh-HHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCCCC
Q 045990 20 PIEIQALFFMALRCALSLLKHDAEGK-EFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDS 98 (298)
Q Consensus 20 ~vEinALwYnAL~~~~~l~~~~~~~~-~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~~~ 98 (298)
-|+--+.-+-|-|++.++++.++..+ +.+..+. =.+-++.+.+--|.+.++ +.+|+..-++ ... |.|+-
T Consensus 602 hvDl~~W~~lasrsl~~iae~lg~~~~E~~~a~~--e~~~~e~L~~~HW~ee~~--~y~D~g~h~~---dv~---~~~~p 671 (849)
T KOG2161|consen 602 HVDLRCWVGLASRSLNRIAEFLGETEAEYATAIT--ELECKENLVQNHWSEEDQ--AYCDFGNHTE---DVS---ITPEP 671 (849)
T ss_pred hhhhHHHHHHHHHHHHHHHHHhcchhhhhhhhhh--HHHHHHHHHHhccChhhC--eeeeccCChh---hcc---ccccC
Confidence 35555666778889999998855443 2222122 123478888999997665 5666532111 111 11110
Q ss_pred CCccccccccCCCCceeccccCCCcc-cchhcccchhhhhcCC--CCHHHHHHHHHHHHHHHHHhhcCCCCccccCCccC
Q 045990 99 IPDWVFDFMPIRGGYFIGNVSPARMD-FRWFALGNCVAILSSL--ATPEQSMAIMDLIEARWEELVGEMPLKIAYPAIES 175 (298)
Q Consensus 99 ip~~l~~~~~~~~gyl~~~v~p~~~d-~~~~a~gN~LaL~~~l--l~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp~~d 175 (298)
-+.=.++.+-..-+-.+.+.. -+| . ..--+++++...+ ++.++-.++++.|.. -.++.+|||||||+- .|
T Consensus 672 ~~g~~~r~~~r~v~~~~p~~e--~v~~h--~GYvSl~P~mlrLlp~~S~rL~~~Ldli~D-~~~lwSpYGlrSLS~--~s 744 (849)
T KOG2161|consen 672 SIGKQFRGLVRRVDWFVPNLE--LVDRH--IGYVSLFPFMLRLLPATSPRLTKLLDLISD-ENELWSPYGLRSLSR--SS 744 (849)
T ss_pred CcccchhhhheeccccCCcce--eeecc--cceeehhhhHHhhcCCCchHHHHHHHHhcC-cccccCcchhhhhhh--cC
Confidence 000001111111011000000 000 0 1111223333333 455678889998853 258999999999996 55
Q ss_pred CCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHH-cC-----CHHHHHHHHHHH--------HHHHccCC-Ccceee
Q 045990 176 HEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIK-TG-----RPQIARRAIDLA--------EARMLKDC-WPEYYD 240 (298)
Q Consensus 176 ~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k-~G-----~~~~A~~ll~~~--------~~~l~~~g-~~E~FD 240 (298)
+-|.-+- ...+..||||+||-.+|-++..|+.+ +. ....|+++-+.+ ....++.| |-|+||
T Consensus 745 ~yym~~N----te~d~pYWRGpIW~N~NYLiLsaL~~~Y~~~~gp~~~nA~~iyeELRaNlv~Nv~k~~~~tG~~wE~Yd 820 (849)
T KOG2161|consen 745 PYYMKRN----TEHDPPYWRGPIWMNVNYLILSALRHFYLYVPGPYQSNAAKIYEELRANLVGNVSKQWQQTGYFWENYD 820 (849)
T ss_pred Ccccccc----CCCCCcccccceeeehHHHHHHHHHHhcccCCCchHHHHHHHHHHHHHHHHHHHHHHhhccceeeeecC
Confidence 4443211 12333899999999999999999998 42 345555544432 23355667 899999
Q ss_pred CCCCCcCCcccchhhHHHHHHHHH
Q 045990 241 GKLGRYIGKQARKYQTWSIAGYLV 264 (298)
Q Consensus 241 g~tg~~~G~~a~~~QAWSaA~~Lr 264 (298)
+.||++.|+. ...-||+=.++.
T Consensus 821 ~~tG~G~ga~--~FtGWTaLVl~i 842 (849)
T KOG2161|consen 821 PRTGRGLGAR--HFTGWTALVLLI 842 (849)
T ss_pred CCCCCccccc--cccchHHHHHHH
Confidence 9998888833 334498755443
No 20
>COG1626 TreA Neutral trehalase [Carbohydrate transport and metabolism]
Probab=98.44 E-value=7.1e-06 Score=83.08 Aligned_cols=206 Identities=22% Similarity=0.291 Sum_probs=143.3
Q ss_pred CCCceeeecccCCccc----------ceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhc
Q 045990 3 SGLDVHVSCENLGIYG----------YPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQ 72 (298)
Q Consensus 3 ~~~~~~~~~~~~~~~G----------~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~ 72 (298)
||.|+. -|=+||.| -||+-|++.|.-....+.+.+. .++.+..+...+++.+.+..|++++|.+.++
T Consensus 328 SGwD~s--sRw~g~~~~LasIrt~~~~p~dlna~~y~~e~~~~~~~~~-~~~~~~~e~~~~~A~~R~~aI~~ylW~~e~G 404 (558)
T COG1626 328 SGWDFS--SRWLGVPAPLASIRTTSILPVDLNALLYKLEEIIANISAI-KGDKETAERYQRKAEARRCAINKYLWDDEAG 404 (558)
T ss_pred ccCccc--ccccCCCccccceeccccchhhhhhHHHHHHHHHHHHHHh-cCchHHHHHHHHHHHHHHHHHHHHccccccc
Confidence 455542 35566654 4789999999999999999887 4577778888899999999999999998655
Q ss_pred ccccccccccchhhhHhhhccCCCCCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHH
Q 045990 73 LNDIYRYKTEEYSHTAVNKFNVIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDL 152 (298)
Q Consensus 73 ~~~~~~~~~e~~~~~a~n~~~i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~ 152 (298)
. .+||++. . +- .-. .++..++.+|..|+++++|++.+++.
T Consensus 405 ~--~~DYd~k-------~---------------------~~-----~~~-----y~~a~~~~plw~G~a~~era~~~a~~ 444 (558)
T COG1626 405 Q--YNDYDWK-------L---------------------KK-----RRA-----YLSAAALWPLWVGLATPERAQRLADA 444 (558)
T ss_pred e--eehhhhh-------c---------------------cc-----ccc-----ccchhhhhhccCCCCCHHHHHHHHHH
Confidence 3 2222111 0 00 001 15556677999999999999999999
Q ss_pred HHHHHHHhhcCCCCccccCCccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHcc
Q 045990 153 IEARWEELVGEMPLKIAYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARMLK 232 (298)
Q Consensus 153 v~~~~~~Llt~~gLrsl~Pp~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~ 232 (298)
+.. .+..+-||-++.+ ++ -+-|-|=|| |+=+.|+-..++.++|....|.++...++..+++
T Consensus 445 ~~~---~l~~pGGl~ast~--~s------------~~QWD~PNg--WaPlq~ia~~gL~ryG~~~la~~ia~rwL~~v~~ 505 (558)
T COG1626 445 ALS---MLEQPGGLSASTP--RS------------GQQWDYPNG--WAPLQWIATQGLKRYGYDILADDIARRWLTNVEQ 505 (558)
T ss_pred HHH---HhcCCCceecccc--cc------------cccccCCCC--CccHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHH
Confidence 854 6778999887777 22 233444454 8889999999999999877777766654443332
Q ss_pred ----CC-CcceeeCC--CCCcCCcccc----hhhHHHHHHHHHHHHhhcC
Q 045990 233 ----DC-WPEYYDGK--LGRYIGKQAR----KYQTWSIAGYLVAKMMLED 271 (298)
Q Consensus 233 ----~g-~~E~FDg~--tg~~~G~~a~----~~QAWSaA~~Lr~~~~l~~ 271 (298)
.| +-|-||=. ++.+.|.+ + +.|-|+-+.+|....++..
T Consensus 506 ~~d~~~~~VEKydv~~~~~~~g~~g-eyp~q~GFGWtNgv~l~lL~~~~~ 554 (558)
T COG1626 506 FYDYEGKLVEKYDVSRGTGPGGGGG-EYPLQDGFGWTNGVVLKLLDLYGP 554 (558)
T ss_pred HHhhcccceeEeeecccccCCCCCc-ccCCcccccchhHHHHHHHHhhCc
Confidence 23 56666543 22222222 3 4589999999998877654
No 21
>PF04685 DUF608: Protein of unknown function, DUF608; InterPro: IPR006775 This domain is found in non-lysosomal glucosylceramidases that catalyze the conversion of glucosylceramide to free glucose and ceramide []. It is involved in sphingomyelin generation and prevention of glycolipid accumulation and may also catalyze the hydrolysis of bile acid 3-O-glucosides, however, the relevance of such activity is unclear in vivo []. ; GO: 0004348 glucosylceramidase activity, 0006665 sphingolipid metabolic process, 0016021 integral to membrane; PDB: 1V7V_A 1V7W_A 1V7X_A.
Probab=98.03 E-value=1.8e-05 Score=77.41 Aligned_cols=180 Identities=18% Similarity=0.244 Sum_probs=72.1
Q ss_pred cccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhccccccc--ccccchhhhHhhhcc
Q 045990 16 IYGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYR--YKTEEYSHTAVNKFN 93 (298)
Q Consensus 16 ~~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~--~~~e~~~~~a~n~~~ 93 (298)
+.|.....++||+.||+.++++++. .++.+.+.++.+.++..++.|.+.+|+.. .|+ ++ .+.
T Consensus 161 ~~G~say~~~L~laAL~A~~emA~~-lgd~~~a~~y~~~~~~~~~~~~~~LWnGe-----yy~~~~d---------~~~- 224 (365)
T PF04685_consen 161 MYGPSAYCGGLWLAALRAAAEMAKI-LGDPELAAKYRELAEKAKKAFNKKLWNGE-----YYRQWYD---------SKY- 224 (365)
T ss_dssp EEEEEHHHHHHHHHHHHHHHHHHHH-HT-HHHHHHHHHHHHHHHHHHHHHSEETT-----EE--EE------------T-
T ss_pred eeCCCHHHHHHHHHHHHHHHHHHHH-CCCHHHHHHHHHHHHHHHHHHHHHhhCHh-----heeeeec---------cCC-
Confidence 5688899999999999999999999 57777888999999999999999999862 222 10 000
Q ss_pred CCCCCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhh----cCCCCccc
Q 045990 94 VIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELV----GEMPLKIA 169 (298)
Q Consensus 94 i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Ll----t~~gLrsl 169 (298)
....+-+.|.+ -|+ +.+ .++.| -.++++++.++.++.|.+ --.. .++|+..+
T Consensus 225 --------------~~~~~~~aDQl-~Gq----w~a--~~~gl-~~v~~~e~v~sAL~sI~~--~N~~~~~~~~~G~~n~ 280 (365)
T PF04685_consen 225 --------------QNGDGCMADQL-CGQ----WWA--RLLGL-GDVLDEEKVKSALRSIYE--YNVKYFLGGEMGAVNG 280 (365)
T ss_dssp --------------TS-EES-TT-S-S------EEH--HHHHH-TT-S-HHHHHHHHHHHHH--HHEE-S-BTTTBGGGG
T ss_pred --------------CCCCeEEeChh-hHH----HHH--HHcCC-cCCCCHHHHHHHHHHHHH--hcCeEccCCCCcEEEe
Confidence 00012222221 111 111 12233 678999999999999965 1122 35666554
Q ss_pred cCCccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHc-cCC----CcceeeCCCC
Q 045990 170 YPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARML-KDC----WPEYYDGKLG 244 (298)
Q Consensus 170 ~Pp~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~-~~g----~~E~FDg~tg 244 (298)
.-|. | .....+.+...|||=+...++..++..|..+++.++.....+... ..| -+|.++...
T Consensus 281 ~~p~----------g--~~~~~~~q~~evW~G~~y~~Aa~mi~~G~~~e~~~~~~~~~~~~~~~~g~~f~~pE~~~~~~- 347 (365)
T PF04685_consen 281 VWPD----------G--KPDTSSPQSNEVWTGVEYAVAAHMIQEGMVEEGLEIAKGIYDRYYGRKGNPFNTPEAINADG- 347 (365)
T ss_dssp S-T-----------------------------------------------------------------------------
T ss_pred eecc----------c--cccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc-
Confidence 4431 1 134445677789999999999888899998888888887666655 444 488887754
Q ss_pred CcCC
Q 045990 245 RYIG 248 (298)
Q Consensus 245 ~~~G 248 (298)
.++|
T Consensus 348 ~~r~ 351 (365)
T PF04685_consen 348 NYRG 351 (365)
T ss_dssp ----
T ss_pred cccc
Confidence 3444
No 22
>COG3459 Cellobiose phosphorylase [Carbohydrate transport and metabolism]
Probab=97.86 E-value=0.00019 Score=76.85 Aligned_cols=165 Identities=18% Similarity=0.179 Sum_probs=121.5
Q ss_pred cceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCCC
Q 045990 18 GYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPD 97 (298)
Q Consensus 18 G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~~ 97 (298)
|.-|=+--+.+.+|+...+|++. .++.+.+..+++.++++++.+.++=|.. ..|+.
T Consensus 754 geSv~lgW~l~~tlq~F~~lak~-r~d~~r~~~~~~~~ea~~~~~~~~~wDg-----~wy~r------------------ 809 (1056)
T COG3459 754 GESVWLGWFLALTLQTFKELAKA-RGDEARADTWAKHVEALREALETNGWDG-----EWYRR------------------ 809 (1056)
T ss_pred cceeehhhHHHHHHHHHHHHHHh-cCcHHHHHHHHHHHHHHHHHHHhcCCCc-----ceEEe------------------
Confidence 34555666788999999999998 5677788888888888888887777663 12222
Q ss_pred CCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCCCccccCCcc---
Q 045990 98 SIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMPLKIAYPAIE--- 174 (298)
Q Consensus 98 ~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp~~--- 174 (298)
=..+.|-+ .++ |..-..+++..++..|+++|..+++++.+-|+.|++ .|+.|.|+|...||..
T Consensus 810 --------~~~d~g~~-lgs--~e~~E~qI~~i~qs~sVlSg~gd~~ra~kaMd~v~k---~L~~pdgvrL~tppf~~~~ 875 (1056)
T COG3459 810 --------GYGDDGTP-LGS--PEDEECQIDSIPQSWSVLSGEGDKERAEKAMDSVMK---YLVDPDGVRLFTPPFSYTK 875 (1056)
T ss_pred --------ccccCCCc-ccC--CCCcccceeeeccchhhhhCCCChHHHHHHHHHHHH---hccCccccEecCCcccccC
Confidence 11122222 232 454556678899999999999999999999999975 8999999999999972
Q ss_pred -CCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHH
Q 045990 175 -SHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLA 226 (298)
Q Consensus 175 -d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~ 226 (298)
+++|--.| .|..==||+.-.+-+--++.|+.|.|+.++|.++...+
T Consensus 876 ~~~gyiK~y------~pgvREnGgQYtHa~~w~i~Alak~G~a~eAw~~f~~i 922 (1056)
T COG3459 876 GDPGYIKRY------PPGVRENGGQYTHAATWVILALAKMGRADEAWELFDKI 922 (1056)
T ss_pred CCCCeeecC------CcccccccceeecccHHHHHHHHhhccHHHHHHHHHhc
Confidence 44544322 23333577777777666788999999999999988754
No 23
>KOG0602 consensus Neutral trehalase [Carbohydrate transport and metabolism]
Probab=97.80 E-value=0.00027 Score=72.79 Aligned_cols=198 Identities=13% Similarity=0.171 Sum_probs=130.1
Q ss_pred ceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCCCC
Q 045990 19 YPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDS 98 (298)
Q Consensus 19 ~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~~~ 98 (298)
.||..|+|..+.++.++.+... .++.+.+....++.+.++..|++.+|.+.+. ..|||+++.- +.
T Consensus 355 vpvDLN~~~~~~~~i~~y~~~~-~Gd~~~s~~~~~k~~~r~~~i~~vlWde~~g--~w~DYd~~~~------~~------ 419 (600)
T KOG0602|consen 355 VPVDLNLLYKWNADIMKYFYVV-DGDPKDSAQFEKKSEQRRAAIQEVLWDEEDG--AWFDYDLELK------KH------ 419 (600)
T ss_pred cccchHHHHHhhHHHHhhhccc-CCChhHHHHHHHHHHHHHHHHHHhccCCCCC--cceecccccc------cc------
Confidence 6899999999999999999888 5666788888999999999999999998655 4666644310 10
Q ss_pred CCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHH----HHHHHHHHHHHHhhc-CCCCccccCCc
Q 045990 99 IPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSM----AIMDLIEARWEELVG-EMPLKIAYPAI 173 (298)
Q Consensus 99 ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~----~Vv~~v~~~~~~Llt-~~gLrsl~Pp~ 173 (298)
+. .+...|+.+|..++.++.+.. .|++.++. ..+++ |.|+ |
T Consensus 420 ---------------------~~-----~~~~sn~~Pl~~~~~~~~~~~~~~~~v~~~le~--~g~~~~p~gi----P-- 465 (600)
T KOG0602|consen 420 ---------------------NT-----YFYASNFAPLWAGCYPAPDDDKSVDKVLDYLEK--SGALTFPGGI----P-- 465 (600)
T ss_pred ---------------------CC-----CcCchhhhhhhccCCCcccccchHHHHHHHHHH--cCCcCCCCCC----c--
Confidence 11 156678889999999955444 45555533 22233 2221 2
Q ss_pred cCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcC---CHHHHHHHHHH----HHHHHcc-CCCcceeeCCC--
Q 045990 174 ESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTG---RPQIARRAIDL----AEARMLK-DCWPEYYDGKL-- 243 (298)
Q Consensus 174 ~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G---~~~~A~~ll~~----~~~~l~~-~g~~E~FDg~t-- 243 (298)
.+ .+..-+-+-|=| +||=...+.+.++.++| ..+.|.++... .-+.... .++.|-||-..
T Consensus 466 -------~S-l~~s~eQWD~Pn--~WaP~q~m~~~gl~~~~~~~~~~~A~kla~~wl~~~~~~~~~~g~~~EKY~vt~~~ 535 (600)
T KOG0602|consen 466 -------TS-LSNSGEQWDFPN--GWAPNQHMAIEGLRRAGNQELQEVALKLAQRWLETNFAVFVDSGGMFEKYDVTRDP 535 (600)
T ss_pred -------cc-CCCchhhccCCC--CCCcceehhhhhhhhcCCHHHHHHHHHHHHHHHHHhhhhhcccCceeEeeccccCC
Confidence 11 122234444555 59999999999999998 45555555443 2223333 34899998743
Q ss_pred CCcCCcc---cchhhHHHHHHHHHHHHhhcCCCcc
Q 045990 244 GRYIGKQ---ARKYQTWSIAGYLVAKMMLEDPSHL 275 (298)
Q Consensus 244 g~~~G~~---a~~~QAWSaA~~Lr~~~~l~~~~~~ 275 (298)
+.+.|++ -...|.|+.|.+|....-....-..
T Consensus 536 ~~~G~ggEY~~QeGFGW~Ng~il~~L~~~g~~~~~ 570 (600)
T KOG0602|consen 536 GPHGGGGEYEVQEGFGWTNGVILDLLKKYGSDLRR 570 (600)
T ss_pred CCCCCCCccccccCCCccchhHHHHHHHcCCcccc
Confidence 3333322 2368999999999887665554444
No 24
>TIGR01535 glucan_glucosid glucan 1,4-alpha-glucosidase. Glucan 1,4-alpha-glucosidase catalyzes the hydrolysis of terminal 1,4-linked alpha-D-glucose residues from non-reducing ends of polysaccharides, releasing a beta-D-glucose monomer. Some forms of this enzyme can hydrolyze terminal 1,6- and 1,3-alpha-D-glucosidic bonds in polysaccharides as well.
Probab=97.66 E-value=0.0029 Score=66.41 Aligned_cols=217 Identities=14% Similarity=0.086 Sum_probs=118.3
Q ss_pred hHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCCCCCCccc
Q 045990 24 QALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPDSIPDWV 103 (298)
Q Consensus 24 nALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~~~ip~~l 103 (298)
-|--|-||.+|++|++.. ++.+.++...+.+..+++.+.++.|.+...+-. .+-|.....+.. |+
T Consensus 405 ~a~v~aaL~~Aa~iA~~~-g~~~~a~~w~~~Ad~i~~~i~~~~~~~~g~~~~-----~~~f~r~~~~~~-------~~-- 469 (648)
T TIGR01535 405 LAAEIAGLTAAADIAEQN-GDAGSAQKYRETADNWQKLIENWTFTTNGPLGD-----GQYYLRIAGLGD-------PN-- 469 (648)
T ss_pred HHHHHHHHHHHHHHHHHc-CCcHHHHHHHHHHHHHHHHHHHhCcCCCcccCC-----CCeEEEeecCCC-------Cc--
Confidence 344569999999999984 554567778888888899999999886311100 000100000000 00
Q ss_pred cccccCCCCceeccccCCCc-ccchhcccchh-hhhcCCCCH--HHHHHHHHHHHHHHHHhhcCC---CCccccCCccCC
Q 045990 104 FDFMPIRGGYFIGNVSPARM-DFRWFALGNCV-AILSSLATP--EQSMAIMDLIEARWEELVGEM---PLKIAYPAIESH 176 (298)
Q Consensus 104 ~~~~~~~~gyl~~~v~p~~~-d~~~~a~gN~L-aL~~~ll~~--eq~~~Vv~~v~~~~~~Llt~~---gLrsl~Pp~~d~ 176 (298)
..+-....|-++... +..+|+ .+| ...+|++++ .+...-++.|++ +|.... |+=--|. ..
T Consensus 470 -----~~~~~~~~n~~~~~~~~~~vDa--SlL~L~~~G~~~~dDPri~~Tl~aIe~---~L~~~~~~~g~~~RY~---~D 536 (648)
T TIGR01535 470 -----ADFLINIANGGGVYPEKEVLDP--GFLELVRLGVKSPDDPHILATLKEIDS---TIKVDTPKGPSWYRYT---HD 536 (648)
T ss_pred -----cccccccccccccCCCCCccCH--HHHHHHHcCCcCCCCHHHHHHHHHHHH---HhccCCCCCCeEEecC---CC
Confidence 000001111111110 111222 112 344776654 344444555543 443321 1100111 12
Q ss_pred CcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCC-CcceeeCCC---------CCc
Q 045990 177 EWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARMLKDC-WPEYYDGKL---------GRY 246 (298)
Q Consensus 177 ~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g-~~E~FDg~t---------g~~ 246 (298)
+|.....+.+.+- --+|-.||.+.+-...-.+..|. .|..+++-++.+-...| +||=.+..+ |+|
T Consensus 537 gyg~~~~~~~~~~---~~~G~~Wpi~T~~~~~y~l~~~~--~a~~~l~~~~~~a~~~g~lpEQV~d~~~~~~~~~~~G~p 611 (648)
T TIGR01535 537 GYGEPAKTEAYDG---TGKGRLWPLLTGERGHYELAAGK--DATPYLKAMEKFANEGGMIPEQVWDQTDLPSRGLFYGLP 611 (648)
T ss_pred CCCCcCCCCCccC---CcCCceeehhhhHHHHHHHHcCC--hHHHHHHHHHHhcCcCCCcCcccCCCCCCcccccccCCc
Confidence 4433332222221 24477799998888777777765 36677777777767777 899887666 444
Q ss_pred CCcccchhhHHHHHHHHHHHHhhcCCCcc
Q 045990 247 IGKQARKYQTWSIAGYLVAKMMLEDPSHL 275 (298)
Q Consensus 247 ~G~~a~~~QAWSaA~~Lr~~~~l~~~~~~ 275 (298)
.| +..+=+||-|+++++.+-+.+-...
T Consensus 612 t~--Sa~PL~WsHA~yi~l~~s~~~g~~~ 638 (648)
T TIGR01535 612 TD--SASPLNWAHAEYVKLLRSNIDGSVL 638 (648)
T ss_pred CC--ccccchhhHHHHHHHHHHhhcCCcc
Confidence 43 4678999999999999888765433
No 25
>PF05592 Bac_rhamnosid: Bacterial alpha-L-rhamnosidase; InterPro: IPR008902 This entry consists of bacterial rhamnosidase A and B enzymes. L-Rhamnose is abundant in biomass as a common constituent of glycolipids and glycosides, such as plant pigments, pectic polysaccharides, gums or biosurfactants. Some rhamnosides are important bioactive compounds. For example, terpenyl glycosides, the glycosidic precursor of aromatic terpenoids, act as important flavouring substances in grapes. Other rhamnosides act as cytotoxic rhamnosylated terpenoids, as signal substances in plants or play a role in the antigenicity of pathogenic bacteria [].; PDB: 2OKX_B 3CIH_A.
Probab=97.64 E-value=0.00019 Score=72.19 Aligned_cols=163 Identities=20% Similarity=0.181 Sum_probs=96.0
Q ss_pred cceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCCC
Q 045990 18 GYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIPD 97 (298)
Q Consensus 18 G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~~ 97 (298)
+..+=.|+++|.||+.+++|++. .++.+.+..++++++.|++.|++.||.+.++
T Consensus 271 ~~~~~~~~~~~~~l~~~a~lA~~-lg~~~~a~~y~~~a~~lk~a~~~~~~d~~~g------------------------- 324 (509)
T PF05592_consen 271 PGATITNALYYYALRAAAELAEA-LGKDEDAAEYRARAERLKAAINRHFWDPEKG------------------------- 324 (509)
T ss_dssp CCEEHHHHHHHHHHHHHHHHHHH-CT-HHHHHHHHHHHHHHHHHHHHHCEETTTT-------------------------
T ss_pred hHHHHHHHHHHHHHHHHHHHHHH-cCCHHHHHHHHHHHHHHHHHHHHhccCcccC-------------------------
Confidence 34444899999999999999998 4666678899999999999999999975322
Q ss_pred CCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHH-HHHHHHHHHHHHHhhcCCCCccccCCccCC
Q 045990 98 SIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQS-MAIMDLIEARWEELVGEMPLKIAYPAIESH 176 (298)
Q Consensus 98 ~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~-~~Vv~~v~~~~~~Llt~~gLrsl~Pp~~d~ 176 (298)
+| .. . .-.+|.+||.++++++++. ..+.+.+.+ .+...+. .+
T Consensus 325 --------------~~--~~--~-------sq~~~alAl~~gl~p~~~~~~~~~~~l~~----~~~~~~~---~~----- 367 (509)
T PF05592_consen 325 --------------GY--AD--G-------SQHANALALLFGLVPEEERAAAALKRLAK----RIAANGY---HL----- 367 (509)
T ss_dssp --------------EE--CT--T-------SHCHHHHCHHCCHC-HHHHTCHCHCHCHH----CCHCCCH---S------
T ss_pred --------------cc--cC--C-------chHHHHHHHHhchhhhhhhHHHHHHHHHH----HHHhcCC---Cc-----
Confidence 11 11 1 2345778999999988776 555554422 2222210 01
Q ss_pred CcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHH-----HHHHccCC--CcceeeCCCC-CcCC
Q 045990 177 EWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLA-----EARMLKDC--WPEYYDGKLG-RYIG 248 (298)
Q Consensus 177 ~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~-----~~~l~~~g--~~E~FDg~tg-~~~G 248 (298)
-.|.+ -.-++..++.++|+.+.|.+++... ...+.+.. +.|.|++..+ .+.+
T Consensus 368 -----------------~~g~~---g~~~~~~~L~~~g~~~~a~~~~~~~~~~~w~~ml~~g~tT~wE~w~~~~~~~~~~ 427 (509)
T PF05592_consen 368 -----------------STGFI---GSPYLLEALFRAGRADGAYDLLTQRDYPSWGYMLDQGATTLWEYWDGDGGDPPNR 427 (509)
T ss_dssp ------------------TCCC----CHHHHHHHHHCCHHCCHHHHHHHHHHHHCHHHHCTT-SS--SS-STT-TCTT-S
T ss_pred -----------------Ccccc---cHHHHHHHHHHcCCHHHHHHHHHhccccchhHHHhCCCCEEEEecCccCCCCCCC
Confidence 11111 2345677888899888888777642 23344322 8999997321 2333
Q ss_pred cccchhhHHHHHHHHHHH
Q 045990 249 KQARKYQTWSIAGYLVAK 266 (298)
Q Consensus 249 ~~a~~~QAWSaA~~Lr~~ 266 (298)
+- .=+|+++-.--+.
T Consensus 428 S~---~H~w~~~p~~~l~ 442 (509)
T PF05592_consen 428 SL---CHAWSAGPTYWLY 442 (509)
T ss_dssp -S---SBGGG-THHHHHH
T ss_pred CC---CCCcchhHHHHHH
Confidence 33 4457766543333
No 26
>PF06824 DUF1237: Protein of unknown function (DUF1237); InterPro: IPR008313 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2P0V_B 3QSP_B 3QPF_A 3QRY_A 3ON6_A 3QT9_A 3QT3_A 2NVP_A 3P2C_B.
Probab=95.64 E-value=0.11 Score=52.20 Aligned_cols=190 Identities=12% Similarity=0.163 Sum_probs=100.5
Q ss_pred cccceeehhHHHHHHHHHHHHhhhhcccCh--HHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhcc
Q 045990 16 IYGYPIEIQALFFMALRCALSLLKHDAEGK--EFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFN 93 (298)
Q Consensus 16 ~~G~~vEinALwYnAL~~~~~l~~~~~~~~--~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~ 93 (298)
+.||.|--|++.--+|+.+++++..+..+. +.+.+..+.++++++.|.++.-++..+...+|-|.+.-|
T Consensus 224 ~y~yliPsNm~a~v~L~~laei~~~~~~~~~~~la~~~~~la~eI~~gI~~~giv~h~~~g~iyAYEVDG~--------- 294 (424)
T PF06824_consen 224 IYPYLIPSNMFAVVALEYLAEILRALGWDDSAELAERARALADEIRAGIEKHGIVEHPKFGKIYAYEVDGF--------- 294 (424)
T ss_dssp SSSEEHHHHHHHHHHHHHHHHHHHHTT-THHHHHHHHHHHHHHHHHHHHHHHSEEEETTTEEEE-SEE-SS---------
T ss_pred hcCcCChHHHHHHHHHHHHHHHHHHhccchHHHHHHHHHHHHHHHHHHHHHheEEeCCCCCeEEEEEecCC---------
Confidence 789999999999999999999998754443 466666666666788888877666445555555533222
Q ss_pred CCCCCCCccccccccCCCCceeccccCCCcccchhcccchhhhh-cCCCCHHHHHHHHHHHHHHHHHhhcCCCCccccCC
Q 045990 94 VIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAIL-SSLATPEQSMAIMDLIEARWEELVGEMPLKIAYPA 172 (298)
Q Consensus 94 i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~-~~ll~~eq~~~Vv~~v~~~~~~Llt~~gLrsl~Pp 172 (298)
|+++. --++| .|++|||+ +|-.+.+ ..| =+++++++ +|+
T Consensus 295 -----------------G~~~~-mDDAN--------vPSLLSlPylGf~~~~--Dpv----YqnTR~~i-------LS~- 334 (424)
T PF06824_consen 295 -----------------GNHLL-MDDAN--------VPSLLSLPYLGFCSKD--DPV----YQNTRRFI-------LSP- 334 (424)
T ss_dssp -----------------S-EE-----SS--------SS-STTHHHHTSS-TT---HH----HHHHHHHH-------TST-
T ss_pred -----------------CCccc-cCCCC--------CchHhhhhhcCCCCCC--cHH----HHHHHHHH-------hCC-
Confidence 22222 00122 45557775 5554432 111 11223333 233
Q ss_pred cc-CCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCC-CcceeeCCCCCcCCcc
Q 045990 173 IE-SHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARMLKDC-WPEYYDGKLGRYIGKQ 250 (298)
Q Consensus 173 ~~-d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g-~~E~FDg~tg~~~G~~ 250 (298)
. .|-| +.|....--.+=|=|.-++|-+++.++|+-- ...++.++.|..+.+--...| +-|=||.+++.-.=
T Consensus 335 -~~NPyy---~~G~~~~GiGsPHt~~~~iWPmsl~~~~lTs-~d~~Ei~~~L~~L~~t~~gtGlmHES~d~~~~~~~T-- 407 (424)
T PF06824_consen 335 -EGNPYY---FSGKAASGIGSPHTPPGYIWPMSLAMQGLTS-DDDEEIRECLRMLKRTTAGTGLMHESFDVDDPSKFT-- 407 (424)
T ss_dssp -T-STTE---EEESSEEEE--TTT-TTEEEHHHHHHHHHT--S-HHHHHHHHHHHHHTSTTSSS--SEEETTEEEEEE--
T ss_pred -CCCCcc---ccCCCcCCCCCCCCCCCCccHHHHHHHHhcC-CCHHHHHHHHHHHHhccCCCCceeccccCCCCcccC--
Confidence 2 2111 1111111112226666666666777776533 345666666666655444555 79999987753333
Q ss_pred cchhhHHHHHHH
Q 045990 251 ARKYQTWSIAGY 262 (298)
Q Consensus 251 a~~~QAWSaA~~ 262 (298)
+..|||+-+.+
T Consensus 408 -R~WFaWaNslF 418 (424)
T PF06824_consen 408 -RPWFAWANSLF 418 (424)
T ss_dssp --S-BHHHHHHH
T ss_pred -cHHHHHHHHHH
Confidence 34999987764
No 27
>PF00723 Glyco_hydro_15: Glycosyl hydrolases family 15; InterPro: IPR011613 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 15 GH15 from CAZY comprises enzymes with several known activities; glucoamylase (3.2.1.3 from EC); alpha-glucosidase (3.2.1.20 from EC); glucodextranase (3.2.1.70 from EC). Glucoamylase (GA) catalyses the release of D-glucose from the non-reducing ends of starch and other oligo- or poly-saccharides. Studies of fungal GA have indicated 3 closely-clustered acidic residues that play a role in the catalytic mechanism []. This region is also conserved in a recently sequenced bacterial GA []. The 3D structure of the pseudo-tetrasaccharide acarbose complexed with glucoamylase II(471) from Aspergillus awamori var. X100 has been determined to 2.4A resolution []. The protein belongs to the mainly-alpha class, and contains 19 helices and 9 strands. This protein is found in higher organisms, and is represented by phosphorylase kinase subunits.; GO: 0004339 glucan 1,4-alpha-glucosidase activity, 0005976 polysaccharide metabolic process; PDB: 1GAI_A 1GAH_A 1LF6_B 1LF9_A 3EQA_A 1AYX_A 2F6D_A 2FBA_A 1DOG_A 1GLM_A ....
Probab=95.62 E-value=0.13 Score=51.36 Aligned_cols=33 Identities=27% Similarity=0.386 Sum_probs=22.0
Q ss_pred ccCC-CcceeeCCCCCcCCcccchhhHHHHHHHHHHH
Q 045990 231 LKDC-WPEYYDGKLGRYIGKQARKYQTWSIAGYLVAK 266 (298)
Q Consensus 231 ~~~g-~~E~FDg~tg~~~G~~a~~~QAWSaA~~Lr~~ 266 (298)
...| ++|=|+-.+|...|.. +++||-+.+|++-
T Consensus 414 ~~~g~lsEq~~~~~G~~~ga~---pltwS~~~~l~~~ 447 (448)
T PF00723_consen 414 NRNGLLSEQFNRYTGFMQGAR---PLTWSYASFLRAG 447 (448)
T ss_dssp -TTS---SEE-TTT--EESSS---S-HHHHHHHHHHH
T ss_pred CcCcEeeeeeecccCCcCCCC---chhhhhhhhHhhc
Confidence 3444 9999999999999966 9999999999974
No 28
>COG4354 Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=76.48 E-value=34 Score=36.13 Aligned_cols=169 Identities=15% Similarity=0.178 Sum_probs=97.9
Q ss_pred cccceeehhHHHHHHHHHHHHhhhhcccCh----------HHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchh
Q 045990 16 IYGYPIEIQALFFMALRCALSLLKHDAEGK----------EFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYS 85 (298)
Q Consensus 16 ~~G~~vEinALwYnAL~~~~~l~~~~~~~~----------~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~ 85 (298)
+.|+--..-.||-.||-++.++++.+...+ .....+.+.+...++.|+++-|+. +...+
T Consensus 504 i~G~ssy~~sl~iaal~A~l~is~~l~~~~~~~a~~e~~~~~~~~y~~~L~~~~e~~~~~LwNG--kYy~l--------- 572 (721)
T COG4354 504 IQGHSSYCGSLFIAALIAALEISKYLLDNAQLEALNEASKNYVDFYNTWLKEAREAFNKYLWNG--KYYIL--------- 572 (721)
T ss_pred eechhhhhhHHHHHHHHHHHHHHHHHhhhhhhhhhHHHHHHHHHHHHHHHHHHHHHHHHhccCc--eeEec---------
Confidence 467788889999999999999988754431 234445556666677777766663 11000
Q ss_pred hhHhhhccCCCCCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhcCCC
Q 045990 86 HTAVNKFNVIPDSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVGEMP 165 (298)
Q Consensus 86 ~~a~n~~~i~~~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt~~g 165 (298)
+ ++.|. +++-.+|+==+|++ ++|-|+ .+++.+.+++.++.|-+ .+---++++
T Consensus 573 ---w------------------s~~~~---~s~lAsQL~Gqfy~--~LLgLp-divdhd~~ksal~sIy~-lnf~~~~~~ 624 (721)
T COG4354 573 ---W------------------SNSGN---DSVLASQLCGQFYA--TLLGLP-DIVDHDKIKSALESIYD-LNFNASEYC 624 (721)
T ss_pred ---c------------------cccCc---hhhhHHHHHhHHHH--HHcCCC-cccchHHHHHHHHHHHh-hcccccccc
Confidence 0 00000 22212222111222 222222 56788888888888742 110011333
Q ss_pred CccccCCccCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCC
Q 045990 166 LKIAYPAIESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARMLKDC 234 (298)
Q Consensus 166 Lrsl~Pp~~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g 234 (298)
..-..- ..|.+. .|.+=|-=++||=++-.++.=+.+.|..+++-++-+..-+++...|
T Consensus 625 ~~n~v~----------~dgsp~-n~~svq~~s~W~gi~F~laa~m~~~Gm~de~~~~~e~~w~~l~~ng 682 (721)
T COG4354 625 AANGVR----------PDGSPV-NPLSVQPLSVWPGINFALAAHMIQMGMKDEGFELAENVWNQLKNNG 682 (721)
T ss_pred ccCccC----------CCCCcC-CcccccccccccchHHHHHHHHHHhcchhhhhHHHHHHHHHHHhCC
Confidence 221111 122332 3467788899999998888888889988887777777777777666
No 29
>PLN02567 alpha,alpha-trehalase
Probab=45.20 E-value=3.3e+02 Score=28.50 Aligned_cols=38 Identities=5% Similarity=-0.080 Sum_probs=34.9
Q ss_pred hhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCC-Cc
Q 045990 199 WPVLLWMLTAACIKTGRPQIARRAIDLAEARMLKDC-WP 236 (298)
Q Consensus 199 WP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g-~~ 236 (298)
|=|...+++.||+..|+.+.|+.+++.+...+..+| +|
T Consensus 154 yyWDSy~i~~GLl~s~~~~~A~~mi~Nf~~~i~~~GfIP 192 (554)
T PLN02567 154 YYWDSYWVIRGLLASKMYETAKGVVENLLYLVDTYGFVP 192 (554)
T ss_pred chHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHcCcCC
Confidence 348899999999999999999999999999999999 45
No 30
>PF07721 TPR_4: Tetratricopeptide repeat; InterPro: IPR011717 This entry includes tetratricopeptide-like repeats not detected by the IPR001440 from INTERPRO, IPR013105 from INTERPRO and IPR011716 from INTERPRO models. The tetratricopeptide repeat (TPR) motif is a protein-protein interaction module found in multiple copies in a number of functionally different proteins that facilitates specific interactions with a partner protein(s) [].; GO: 0042802 identical protein binding
Probab=42.70 E-value=47 Score=19.68 Aligned_cols=25 Identities=28% Similarity=0.388 Sum_probs=20.7
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHH
Q 045990 200 PVLLWMLTAACIKTGRPQIARRAID 224 (298)
Q Consensus 200 P~l~g~~~~Al~k~G~~~~A~~ll~ 224 (298)
|+.....+.++.+.|+.+.|+++++
T Consensus 1 ~~a~~~la~~~~~~G~~~eA~~~l~ 25 (26)
T PF07721_consen 1 PRARLALARALLAQGDPDEAERLLR 25 (26)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHh
Confidence 5667778889999999999998764
No 31
>KOG2119 consensus Predicted bile acid beta-glucosidase [Carbohydrate transport and metabolism]
Probab=42.51 E-value=4.3e+02 Score=29.02 Aligned_cols=227 Identities=17% Similarity=0.192 Sum_probs=112.8
Q ss_pred ccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHHhhhhchhcccccccccccchhhhHhhhccCCC
Q 045990 17 YGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRSYFWLDFQQLNDIYRYKTEEYSHTAVNKFNVIP 96 (298)
Q Consensus 17 ~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~~fw~~~~~~~~~~~~~~e~~~~~a~n~~~i~~ 96 (298)
+|-.-+--.||..||..+.+++... ++.+......++++.-+..+.+..|+. ..|+|...
T Consensus 620 tGvSAYCGgLWlAALqa~~amA~~~-g~~~~~~~f~~klekak~~ye~kLWNG-----sYfnyD~s-------------- 679 (879)
T KOG2119|consen 620 TGVSAYCGGLWLAALQAASAMARQI-GDPNTQDYFNNKLEKAKDVYEKKLWNG-----SYFNYDES-------------- 679 (879)
T ss_pred ecchhhhhHHHHHHHHHHHHHHHHh-CChhHHHHHHHHHHHHHHHHHHhhcCC-----ceeccccC--------------
Confidence 4555566789999999999999985 554455555555555588888888885 23333110
Q ss_pred CCCCccccccccCCCCceeccccCCCcccchhcccchhhhhcCCCCHHHHHHHHHHHHHHHHHhhc---CCCCccccCCc
Q 045990 97 DSIPDWVFDFMPIRGGYFIGNVSPARMDFRWFALGNCVAILSSLATPEQSMAIMDLIEARWEELVG---EMPLKIAYPAI 173 (298)
Q Consensus 97 ~~ip~~l~~~~~~~~gyl~~~v~p~~~d~~~~a~gN~LaL~~~ll~~eq~~~Vv~~v~~~~~~Llt---~~gLrsl~Pp~ 173 (298)
+. |+ -.+|-..|+-=++++.+.-+. .+.+++..++-+++|-+ .+-+.. .+|--
T Consensus 680 ---~s----------~~-s~sImaDQlaGqWy~~a~gl~---~i~~~~~vrsAL~tIy~-~NVm~~~~G~~GAV------ 735 (879)
T KOG2119|consen 680 ---SS----------GS-SSSIMADQLAGQWYARACGLP---PIFPEEKVRSALDTIYD-FNVMKFKGGRMGAV------ 735 (879)
T ss_pred ---CC----------Cc-chhhHHHhHhhHHHHHhcCCC---ccCchHHHHHHHHHHHh-hceeeecCCceecc------
Confidence 00 00 011111111111233222222 27888888888888853 111111 12210
Q ss_pred cCCCcceeccCCCCCCCCccccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHH-HHHHccC--C----CcceeeCCC-CC
Q 045990 174 ESHEWRIVTGCDPKNTRWSYHNGGSWPVLLWMLTAACIKTGRPQIARRAIDLA-EARMLKD--C----WPEYYDGKL-GR 245 (298)
Q Consensus 174 ~d~~y~~~~~gd~~~rp~aYHnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~-~~~l~~~--g----~~E~FDg~t-g~ 245 (298)
-++.| .| +-+..+-.---||+=+....+.-.+.-|..+.+-....+. ...-++- | -||-+.... .+
T Consensus 736 --NGm~p--~G--~VD~ssiQS~EvW~GvtYalAAtMIqeG~~e~~FqTA~G~y~~~w~~~glg~~FqTPEa~~~~~~yR 809 (879)
T KOG2119|consen 736 --NGMLP--SG--KVDTSSIQSREVWAGVTYALAATMIQEGLVEKGFQTASGIYEAIWSETGLGYAFQTPEAWYMEDEYR 809 (879)
T ss_pred --ccccC--CC--ccccccceehhhhccHHHHHHHHHHHHhhHHhhhhhhhhhHHHHhhhcccceEEECchhhhcchhhh
Confidence 01111 11 1112222333477777666666666666555555544432 2222232 2 266555533 33
Q ss_pred cCCcccchhhHHHHHHHHHHHHhhc--CCCccccccccccccccccccccC
Q 045990 246 YIGKQARKYQTWSIAGYLVAKMMLE--DPSHLGMISLEEDKQMKPVIRRSS 294 (298)
Q Consensus 246 ~~G~~a~~~QAWSaA~~Lr~~~~l~--~~~~~~~~~~~~~~~~~~~~~~~~ 294 (298)
-.|-. +.--.|..--.|......+ .|+...-+++...++..|+-++-+
T Consensus 810 sl~YM-RPLsIWamQwaL~~~~~~~~~~~e~~~~i~~~~~~~f~~~s~~~s 859 (879)
T KOG2119|consen 810 SLGYM-RPLAIWAMQWALTKPQAKPEVVPELAPSISLQQGKGFGKVSRDLS 859 (879)
T ss_pred hhhhc-chhHHHHHHHHHhcccccCCCCccccccchhhcCCCcccHHHhhc
Confidence 33322 2255565444444433333 245666677777777776655543
No 32
>COG3538 Uncharacterized conserved protein [Function unknown]
Probab=41.53 E-value=1.5e+02 Score=29.76 Aligned_cols=45 Identities=18% Similarity=0.284 Sum_probs=31.7
Q ss_pred cccceeehhHHHHHHHHHHHHhhhhcccChHHHHHHHHHHHHHHHHHHH
Q 045990 16 IYGYPIEIQALFFMALRCALSLLKHDAEGKEFIERIVKRLHALSYHMRS 64 (298)
Q Consensus 16 ~~G~~vEinALwYnAL~~~~~l~~~~~~~~~~~~~~~~~~~~l~~~~~~ 64 (298)
++||.|=-|..-.=-|..+.++++...++.+.+. ++..|+..|++
T Consensus 224 ~YgYliPsNmFaVVvl~y~~ei~~~~~~~~~~a~----~a~~L~~eIq~ 268 (434)
T COG3538 224 EYGYLIPSNMFAVVVLSYLQEILEALPHDAEIAR----QAKELANEIQQ 268 (434)
T ss_pred hcccccccchhhhhhHHHHHHHHHHccccHHHHH----HHHHHHHHHHH
Confidence 5788888888777788889998886566665555 55555555544
No 33
>PF06051 DUF928: Domain of Unknown Function (DUF928); InterPro: IPR010328 This is a family of uncharacterised bacterial proteins.
Probab=35.69 E-value=40 Score=30.15 Aligned_cols=22 Identities=14% Similarity=0.285 Sum_probs=17.4
Q ss_pred hHHHHHHHHHHHHhhhhcccCh
Q 045990 24 QALFFMALRCALSLLKHDAEGK 45 (298)
Q Consensus 24 nALwYnAL~~~~~l~~~~~~~~ 45 (298)
|.+||.||..++++-...-.+.
T Consensus 144 ~GiWyDaL~~La~lr~~~p~d~ 165 (189)
T PF06051_consen 144 NGIWYDALATLAELRRSQPNDP 165 (189)
T ss_pred hCchHHHHHHHHHHHHcCCCCh
Confidence 6799999999999987733343
No 34
>PF13428 TPR_14: Tetratricopeptide repeat
Probab=30.27 E-value=1.3e+02 Score=19.66 Aligned_cols=31 Identities=29% Similarity=0.288 Sum_probs=24.5
Q ss_pred hhhHHHHHHHHHHcCCHHHHHHHHHHHHHHH
Q 045990 200 PVLLWMLTAACIKTGRPQIARRAIDLAEARM 230 (298)
Q Consensus 200 P~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l 230 (298)
|.+.-.++.++.+.|+.+.|+++++.+...-
T Consensus 1 p~~~~~la~~~~~~G~~~~A~~~~~~~l~~~ 31 (44)
T PF13428_consen 1 PAAWLALARAYRRLGQPDEAERLLRRALALD 31 (44)
T ss_pred CHHHHHHHHHHHHcCCHHHHHHHHHHHHHHC
Confidence 3455567888999999999999999876653
No 35
>PF12854 PPR_1: PPR repeat
Probab=29.28 E-value=80 Score=19.94 Aligned_cols=23 Identities=26% Similarity=0.156 Sum_probs=19.6
Q ss_pred HHHHHHHHHHcCCHHHHHHHHHH
Q 045990 203 LWMLTAACIKTGRPQIARRAIDL 225 (298)
Q Consensus 203 ~g~~~~Al~k~G~~~~A~~ll~~ 225 (298)
-..++.|+.|.|+.+.|.++++.
T Consensus 10 y~~lI~~~Ck~G~~~~A~~l~~~ 32 (34)
T PF12854_consen 10 YNTLIDGYCKAGRVDEAFELFDE 32 (34)
T ss_pred HHHHHHHHHHCCCHHHHHHHHHh
Confidence 45678899999999999998764
No 36
>PF15601 Imm42: Immunity protein 42
Probab=27.49 E-value=33 Score=29.38 Aligned_cols=41 Identities=15% Similarity=0.163 Sum_probs=34.1
Q ss_pred ccCCchhhhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCC
Q 045990 194 HNGGSWPVLLWMLTAACIKTGRPQIARRAIDLAEARMLKDC 234 (298)
Q Consensus 194 HnG~vWP~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g 234 (298)
+-|+.||.|+.-+-.+.++....+.|.+.+..+...+.+..
T Consensus 33 ~wGskfP~Lm~~LY~g~L~~~~~~~A~~eL~~I~~~l~~~~ 73 (134)
T PF15601_consen 33 GWGSKFPLLMNELYRGYLRYEELEKALKELEEIRKELKKFP 73 (134)
T ss_pred CCCCcchHHHHHHHcCCCCHHHHHHHHHHHHHHHHHHhcCC
Confidence 67999999999999888888788888888888777766554
No 37
>PF13812 PPR_3: Pentatricopeptide repeat domain
Probab=25.29 E-value=1.4e+02 Score=17.55 Aligned_cols=24 Identities=33% Similarity=0.454 Sum_probs=19.2
Q ss_pred HHHHHHHHHcCCHHHHHHHHHHHH
Q 045990 204 WMLTAACIKTGRPQIARRAIDLAE 227 (298)
Q Consensus 204 g~~~~Al~k~G~~~~A~~ll~~~~ 227 (298)
-.++.++.+.|+.+.|.+++....
T Consensus 5 ~~ll~a~~~~g~~~~a~~~~~~M~ 28 (34)
T PF13812_consen 5 NALLRACAKAGDPDAALQLFDEMK 28 (34)
T ss_pred HHHHHHHHHCCCHHHHHHHHHHHH
Confidence 356788999999999988877654
No 38
>PRK13270 treF trehalase; Provisional
Probab=21.62 E-value=1.2e+02 Score=31.87 Aligned_cols=35 Identities=9% Similarity=-0.034 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCCC
Q 045990 201 VLLWMLTAACIKTGRPQIARRAIDLAEARMLKDCW 235 (298)
Q Consensus 201 ~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g~ 235 (298)
|..-+++.||+..|+.+.|+.+++.+..++.++||
T Consensus 175 WDSYwi~~GLl~sg~~~~a~~mi~Nf~~li~~yGf 209 (549)
T PRK13270 175 WDSYFTMLGLAESGREDLLKCMADNFAWMIENYGH 209 (549)
T ss_pred hhHHHHHHHhhhcCcHHHHHHHHHHHHHHHHHcCc
Confidence 67899999999999999999999999999999984
No 39
>PRK13272 treA trehalase; Provisional
Probab=21.42 E-value=1.2e+02 Score=31.85 Aligned_cols=35 Identities=11% Similarity=0.089 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCCC
Q 045990 201 VLLWMLTAACIKTGRPQIARRAIDLAEARMLKDCW 235 (298)
Q Consensus 201 ~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g~ 235 (298)
|..-+++.||+..|+.+.|+.+++.+..++.++||
T Consensus 164 WDSY~i~~GLl~s~~~~~a~~mi~Nf~~~i~~yGf 198 (542)
T PRK13272 164 WDSYFTMLGLVKSGQTTLSRQMLDNFAYLIDTYGH 198 (542)
T ss_pred hHHHHHHHhhhhcCcHHHHHHHHHHHHHHHHHcCc
Confidence 67899999999999999999999999999999984
No 40
>PRK13271 treA trehalase; Provisional
Probab=21.39 E-value=1.2e+02 Score=31.96 Aligned_cols=35 Identities=3% Similarity=-0.168 Sum_probs=32.8
Q ss_pred hhHHHHHHHHHHcCCHHHHHHHHHHHHHHHccCCC
Q 045990 201 VLLWMLTAACIKTGRPQIARRAIDLAEARMLKDCW 235 (298)
Q Consensus 201 ~l~g~~~~Al~k~G~~~~A~~ll~~~~~~l~~~g~ 235 (298)
|..-+++.||+..|+.+.|+.+++.+..++.++||
T Consensus 163 WDSY~i~~GLl~s~~~~~a~~mi~Nf~~~i~~yG~ 197 (569)
T PRK13271 163 WDSYFTMLGLAESGHWDKVADMVANFAHEIDTWGH 197 (569)
T ss_pred hHHHHHHHhhHhcCCHHHHHHHHHHHHHHHHHhCc
Confidence 67889999999999999999999999999999984
No 41
>PF13249 Prenyltrans_2: Prenyltransferase-like; PDB: 1O6R_B 1O6Q_B 1H35_C 1H3A_C 1SQC_A 1UMP_A 1O6H_C 1O79_B 1GSZ_C 1H37_C ....
Probab=20.64 E-value=3.8e+02 Score=20.35 Aligned_cols=43 Identities=19% Similarity=0.070 Sum_probs=28.6
Q ss_pred cCCchhhhHHHHHHHHHHcCCHHHHHHH--HHHHHHHHccCC-Ccc
Q 045990 195 NGGSWPVLLWMLTAACIKTGRPQIARRA--IDLAEARMLKDC-WPE 237 (298)
Q Consensus 195 nG~vWP~l~g~~~~Al~k~G~~~~A~~l--l~~~~~~l~~~g-~~E 237 (298)
.+..-++..++.+.|+...|.....+++ ++-+......+| |..
T Consensus 18 ~~~~~~~~T~~al~aL~~~g~~~~~~~~~~~~~L~~~q~~dGg~~~ 63 (113)
T PF13249_consen 18 GGPSDVWDTAFALLALAALGEEPDRDRAAAVEWLLSQQNPDGGWGS 63 (113)
T ss_dssp TS-BEHHHHHHHHHHHHHHTSHHCHHHHHHHHHHHHHB-TTSGBBS
T ss_pred CCCCCHHHHHHHHHHHHHhCCcccHHHHHHHHHHHHhCCCCCCccC
Confidence 4466789999999999999976655555 555555545344 665
Done!