BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045992
(213 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P50134|DCOR_DATST Ornithine decarboxylase OS=Datura stramonium PE=2 SV=1
Length = 431
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 112 CTSASSN----NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANT 162
C S SN T+ STVF PTC A+ V + LPEL+VNDWL+FP+ A T
Sbjct: 352 CMSNRSNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYT 406
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 30 TEDGFVEFMKSTVLKR-QELDETFYVLDLGHHFSLL-SLISNLPMVHPYYAVK 80
+ D +FM S + ++ Q+ + FYVLDLG SL+ + LP + P+YAVK
Sbjct: 42 SRDALQDFMVSIITQKLQDEKQPFYVLDLGEVVSLMDQWNAGLPNIRPFYAVK 94
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 15/24 (62%), Positives = 16/24 (66%)
Query: 85 KIRMWHSKCELSIRIKSPVDGGAR 108
KIR H KCEL +RIK DG AR
Sbjct: 166 KIRKHHPKCELLLRIKPMDDGNAR 189
>sp|O22616|DCOR_SOLLC Ornithine decarboxylase OS=Solanum lycopersicum GN=ODC PE=2 SV=2
Length = 431
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 33/55 (60%), Gaps = 4/55 (7%)
Query: 112 CTSASSN----NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANT 162
C S +N T+ STVF PTC A+ V + LPEL+VNDWL+FP+ A T
Sbjct: 352 CMSNRNNLNCGGSKTFPSTVFGPTCDALDTVLRDYQLPELQVNDWLIFPNMGAYT 406
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 33/53 (62%), Gaps = 2/53 (3%)
Query: 30 TEDGFVEFMKSTVLKR-QELDETFYVLDLGHHFSLL-SLISNLPMVHPYYAVK 80
++D +FM S + ++ Q+ + FYVLDLG SL+ S LP + P+YAVK
Sbjct: 42 SKDALQDFMVSIITQKLQDDKQPFYVLDLGEVVSLMEQWNSALPNIRPFYAVK 94
Score = 33.9 bits (76), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 16/32 (50%), Positives = 20/32 (62%)
Query: 77 YAVKGKLDKIRMWHSKCELSIRIKSPVDGGAR 108
Y + ++ KIR H KCEL +RIK DG AR
Sbjct: 158 YDSEDEVYKIRKHHPKCELLLRIKPMTDGNAR 189
>sp|Q8S3N2|DCOR_CAPAN Ornithine decarboxylase OS=Capsicum annuum GN=ODC PE=2 SV=1
Length = 435
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 19/40 (47%), Positives = 28/40 (70%)
Query: 123 YKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANT 162
+ ST+F PTC A+ V + +PEL+VNDW++FP+ A T
Sbjct: 371 FPSTIFGPTCDALDTVLRDYHVPELQVNDWVIFPNMGAYT 410
Score = 38.1 bits (87), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%), Gaps = 2/53 (3%)
Query: 30 TEDGFVEFMKSTVLKR-QELDETFYVLDLGHHFSLLSLIS-NLPMVHPYYAVK 80
++D +FM S + ++ Q + FYVLDLG SL+ + LP V P+YAVK
Sbjct: 46 SKDALQDFMVSIITQKLQGEKKPFYVLDLGEVVSLMDQWNVALPNVRPFYAVK 98
Score = 31.2 bits (69), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 15/32 (46%), Positives = 20/32 (62%)
Query: 77 YAVKGKLDKIRMWHSKCELSIRIKSPVDGGAR 108
Y + ++ KI+ H KCEL +RIK DG AR
Sbjct: 162 YDSEDEVYKIKKHHPKCELLLRIKPMNDGNAR 193
>sp|P07805|DCOR_TRYBB Ornithine decarboxylase OS=Trypanosoma brucei brucei PE=1 SV=2
Length = 423
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 29/45 (64%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
N+ Y S+V+ PTC + ++ + LPE++V +WL+F D A T+
Sbjct: 345 NEKLYPSSVWGPTCDGLDQIVERYYLPEMQVGEWLLFEDMGAYTV 389
>sp|P27116|DCOR_LEIDO Ornithine decarboxylase OS=Leishmania donovani PE=3 SV=1
Length = 707
Score = 40.8 bits (94), Expect = 0.007, Method: Composition-based stats.
Identities = 13/33 (39%), Positives = 22/33 (66%)
Query: 125 STVFRPTCTAVGKVFAGHPLPELEVNDWLVFPD 157
+T+F PTC ++ + P PE+++ DWL+ PD
Sbjct: 627 TTIFGPTCDSMDCILKKQPFPEMKLGDWLLVPD 659
Score = 32.0 bits (71), Expect = 3.0, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 23/35 (65%), Gaps = 1/35 (2%)
Query: 47 ELDETFYVLDLGHHFSLLSLISN-LPMVHPYYAVK 80
E ++ FY++DLG ++ + LPMV PY+AVK
Sbjct: 254 EPEDPFYIIDLGRVVEQMARWRHELPMVRPYFAVK 288
>sp|P27120|DCOR1_XENLA Ornithine decarboxylase 1 OS=Xenopus laevis GN=odc1-a PE=2 SV=1
Length = 460
Score = 40.4 bits (93), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 15/45 (33%), Positives = 28/45 (62%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
++ Y S+++ PTC + ++ LPEL+V DW++F + A T+
Sbjct: 348 DEKFYSSSIWGPTCDGLDRIVERFELPELQVGDWMLFENMGAYTV 392
>sp|Q9I8S4|DCOR2_XENLA Ornithine decarboxylase 2 OS=Xenopus laevis GN=odc1-b PE=2 SV=1
Length = 456
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 28/47 (59%)
Query: 117 SNNQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
S +Q Y S+++ PTC + ++ LPEL V DWL+F + A T+
Sbjct: 342 SPDQPLYTSSLWGPTCDGLDQIAERVQLPELHVGDWLLFENMGAYTI 388
>sp|Q54UF3|DCOR_DICDI Probable ornithine decarboxylase OS=Dictyostelium discoideum GN=odc
PE=3 SV=1
Length = 461
Score = 38.9 bits (89), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 23/38 (60%)
Query: 126 TVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
T+F PTC ++ V +PEL++ DWL F D A T+
Sbjct: 396 TLFGPTCDSIDVVLKDTQIPELKIGDWLYFQDMGAYTI 433
>sp|P09057|DCOR_RAT Ornithine decarboxylase OS=Rattus norvegicus GN=Odc1 PE=1 SV=1
Length = 461
Score = 38.5 bits (88), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
++ Y S+++ PTC + ++ LPE+ V DW++F + A T+
Sbjct: 347 DEKYYSSSIWGPTCDGLDRIVERCSLPEMHVGDWMLFENMGAYTV 391
>sp|P27119|DCOR_MUSPA Ornithine decarboxylase OS=Mus pahari GN=Odc1 PE=2 SV=1
Length = 461
Score = 38.1 bits (87), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
++ Y S+++ PTC + ++ LPE+ V DW++F + A T+
Sbjct: 347 DEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTV 391
>sp|P00860|DCOR_MOUSE Ornithine decarboxylase OS=Mus musculus GN=Odc1 PE=1 SV=2
Length = 461
Score = 37.7 bits (86), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
++ Y S+++ PTC + ++ LPE+ V DW++F + A T+
Sbjct: 347 DEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTV 391
>sp|P11926|DCOR_HUMAN Ornithine decarboxylase OS=Homo sapiens GN=ODC1 PE=1 SV=2
Length = 461
Score = 37.7 bits (86), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
++ Y S+++ PTC + ++ LPE+ V DW++F + A T+
Sbjct: 347 DEKYYSSSIWGPTCDGLDRIVERCDLPEMHVGDWMLFENMGAYTV 391
>sp|P14019|DCOR_CRIGR Ornithine decarboxylase OS=Cricetulus griseus GN=ODC1 PE=2 SV=3
Length = 455
Score = 37.7 bits (86), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
++ Y S+++ PTC + ++ LPE+ V DW++F + A T+
Sbjct: 341 DEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTV 385
>sp|P27117|DCOR_BOVIN Ornithine decarboxylase OS=Bos taurus GN=ODC1 PE=2 SV=1
Length = 461
Score = 37.7 bits (86), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 14/45 (31%), Positives = 27/45 (60%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
++ Y S+++ PTC + ++ LPE+ V DW++F + A T+
Sbjct: 347 DEKYYSSSIWGPTCDGLDRIVERCNLPEMHVGDWMLFENMGAYTV 391
>sp|O35484|AZIN1_MOUSE Antizyme inhibitor 1 OS=Mus musculus GN=Azin1 PE=1 SV=1
Length = 448
Score = 37.4 bits (85), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 4/63 (6%)
Query: 123 YKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTLFVEPISMDLAMLP---FEL 179
+ S+++ P+C + ++ LPEL V DWL+F + A++ F EP + + P F +
Sbjct: 349 FTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADS-FHEPSAFNDFQRPAIYFMM 407
Query: 180 KFS 182
FS
Sbjct: 408 SFS 410
>sp|Q63764|AZIN1_RAT Antizyme inhibitor 1 OS=Rattus norvegicus GN=Azin1 PE=1 SV=1
Length = 448
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 14/41 (34%), Positives = 26/41 (63%)
Query: 123 YKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
+ S+++ P+C + ++ LPEL V DWL+F + A++L
Sbjct: 349 FTSSLWGPSCDELDQIVESCLLPELSVGDWLIFDNMGADSL 389
>sp|Q8BVM4|ADC_MOUSE Antizyme inhibitor 2 OS=Mus musculus GN=Adc PE=2 SV=1
Length = 459
Score = 37.4 bits (85), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 18/47 (38%), Positives = 26/47 (55%)
Query: 117 SNNQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
S +Q Y S+++ P V G LP+L+V DWLVF + A T+
Sbjct: 345 SADQPLYSSSLWGPAVEGCDCVAEGLWLPQLQVGDWLVFDNMGAYTV 391
>sp|P27118|DCOR_CHICK Ornithine decarboxylase (Fragment) OS=Gallus gallus GN=ODC1 PE=2
SV=1
Length = 450
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 13/45 (28%), Positives = 26/45 (57%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
+ Y +++ PTC + ++ +PEL+V DW++F + A T+
Sbjct: 337 DDGCYSCSIWGPTCDGLDRIVERCNMPELQVGDWILFENMGAYTV 381
>sp|Q5R7K3|AZIN1_PONAB Antizyme inhibitor 1 OS=Pongo abelii GN=AZIN1 PE=2 SV=1
Length = 448
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTLFVEPISMD 171
++ + S+++ P+C + ++ LPEL V DWL+F + A++ F EP + +
Sbjct: 345 DEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADS-FHEPSAFN 396
>sp|O14977|AZIN1_HUMAN Antizyme inhibitor 1 OS=Homo sapiens GN=AZIN1 PE=1 SV=2
Length = 448
Score = 37.0 bits (84), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 16/53 (30%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTLFVEPISMD 171
++ + S+++ P+C + ++ LPEL V DWL+F + A++ F EP + +
Sbjct: 345 DEPLFTSSLWGPSCDELDQIVESCLLPELNVGDWLIFDNMGADS-FHEPSAFN 396
>sp|P41931|DCOR_CAEEL Ornithine decarboxylase OS=Caenorhabditis elegans GN=odc-1 PE=3
SV=2
Length = 422
Score = 36.6 bits (83), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 40/81 (49%), Gaps = 10/81 (12%)
Query: 116 SSNNQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL--------FVEP 167
++ + ST++ PTC ++ V +P++ V +WL +PD A TL F +P
Sbjct: 343 DTDRNEKFMSTIWGPTCDSLDLVEDKKLMPKMNVGEWLYYPDMGAYTLAAATTFNGFSKP 402
Query: 168 ISMDLAMLPFELKFSVRIQAH 188
+ M ++ E+ S+R H
Sbjct: 403 VPM--YVMSEEMWESIRDSTH 421
>sp|Q96A70|ADC_HUMAN Arginine decarboxylase OS=Homo sapiens GN=ADC PE=2 SV=1
Length = 460
Score = 36.2 bits (82), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 26/55 (47%)
Query: 109 THICTSASSNNQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTL 163
T I S Q Y S+++ P V G LP+L V DWLVF + A T+
Sbjct: 338 TPILQKKPSTEQPLYSSSLWGPAVDGCDCVAEGLWLPQLHVGDWLVFDNMGAYTV 392
>sp|P49725|DCOR_PANRE Ornithine decarboxylase OS=Panagrellus redivivus GN=ODC PE=2 SV=1
Length = 435
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 14/44 (31%), Positives = 22/44 (50%)
Query: 119 NQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANT 162
++ + V+ PTC + +V +P L DWL +PD A T
Sbjct: 355 DEPRFPVCVWGPTCDGLDQVEESSVMPRLYEGDWLYYPDMGAYT 398
>sp|P78599|DCOR_CANAL Ornithine decarboxylase OS=Candida albicans (strain SC5314 / ATCC
MYA-2876) GN=SPE1 PE=3 SV=1
Length = 473
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 15/33 (45%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 49 DETFYVLDLGHHFSLLSLISN-LPMVHPYYAVK 80
+++F+V DLG + ++ LPMV PYYAVK
Sbjct: 74 EDSFFVCDLGEIINSVNQWQQILPMVQPYYAVK 106
>sp|A7H2I7|MNMG_CAMJD tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG
OS=Campylobacter jejuni subsp. doylei (strain ATCC
BAA-1458 / RM4099 / 269.97) GN=mnmG PE=3 SV=1
Length = 619
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 30/109 (27%), Positives = 49/109 (44%), Gaps = 18/109 (16%)
Query: 107 ARTHICTSASSNNQTTYKSTVFRPTCTAVGKVFAGHPLPELEVNDWLVFPDKRANTLFVE 166
ART+ T N Y++ +F VG + P E ++N F DK ++ LF+E
Sbjct: 239 ARTNTTTHEIIKN-NFYRAPLFTGQIEGVGPRYC--PSIEDKINR---FSDKESHHLFIE 292
Query: 167 PISMDL---------AMLPFELKFSVRIQAHTACEYENEVILLHGFASE 206
P ++D LP+E++ + H+ +EN I G+A E
Sbjct: 293 PQTIDATEYYINGFSTSLPYEVQTQM---LHSVKGFENAKITRFGYAIE 338
>sp|P27121|DCOR_NEUCR Ornithine decarboxylase OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=spe-1
PE=2 SV=1
Length = 484
Score = 30.8 bits (68), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 16/33 (48%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 49 DETFYVLDLGHHFSL-LSLISNLPMVHPYYAVK 80
++TF+V DLG + L NLP V P+YAVK
Sbjct: 82 EDTFFVADLGEVYRQHLRWKLNLPRVKPFYAVK 114
>sp|A7TH93|JIP5_VANPO WD repeat-containing protein JIP5 OS=Vanderwaltozyma polyspora
(strain ATCC 22028 / DSM 70294) GN=JIP5 PE=3 SV=1
Length = 559
Score = 30.8 bits (68), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 13/42 (30%), Positives = 27/42 (64%), Gaps = 1/42 (2%)
Query: 54 VLDLGHHFSLLSLISNLPMVHPYYAVKGKLDKIRMWHSKCEL 95
V+++ +H SL +S L + + Y + G +DK+++W S+ E+
Sbjct: 350 VVEVRNHSSL-DEVSFLDLDYDYRVISGGMDKVKIWQSRNEV 390
>sp|O88799|ZAN_MOUSE Zonadhesin OS=Mus musculus GN=Zan PE=2 SV=1
Length = 5376
Score = 30.4 bits (67), Expect = 8.8, Method: Composition-based stats.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 86 IRMWHSKCELSIRIKSPVDGGAR-THICTSASSNNQTTYKSTVFRPTCTAV 135
I W+ KC L K VDGG+ T I +++ TY P+C+ V
Sbjct: 4354 IHCWNFKCPLGTECKDSVDGGSNCTKIALQCPAHSHHTYCLPSCIPSCSNV 4404
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.134 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,253,749
Number of Sequences: 539616
Number of extensions: 2980085
Number of successful extensions: 6298
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 23
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 6249
Number of HSP's gapped (non-prelim): 57
length of query: 213
length of database: 191,569,459
effective HSP length: 113
effective length of query: 100
effective length of database: 130,592,851
effective search space: 13059285100
effective search space used: 13059285100
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)