BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 045997
(63 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q96539|CH10_BRANA 10 kDa chaperonin OS=Brassica napus PE=3 SV=1
Length = 98
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 47/62 (75%), Positives = 56/62 (90%)
Query: 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
L SGKV+AVGPG+RD +GK IPVSVKEGDTVLLPEYGG +VKLG+K+YHL+ DE +LGTL
Sbjct: 36 LNSGKVIAVGPGSRDKDGKLIPVSVKEGDTVLLPEYGGTQVKLGEKEYHLFRDEDVLGTL 95
Query: 61 HD 62
H+
Sbjct: 96 HE 97
>sp|P34893|CH10_ARATH 10 kDa chaperonin OS=Arabidopsis thaliana GN=CPN10 PE=3 SV=1
Length = 98
Score = 99.4 bits (246), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 46/62 (74%), Positives = 55/62 (88%)
Query: 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
L SGKV+AVGPG+RD +GK IPVSVKEGDTVLLPEYGG +VKLG+ +YHL+ DE +LGTL
Sbjct: 36 LNSGKVIAVGPGSRDKDGKLIPVSVKEGDTVLLPEYGGTQVKLGENEYHLFRDEDVLGTL 95
Query: 61 HD 62
H+
Sbjct: 96 HE 97
>sp|Q9W6X3|CH10_ORYLA 10 kDa heat shock protein, mitochondrial OS=Oryzias latipes
GN=hspe1 PE=3 SV=1
Length = 99
Score = 62.0 bits (149), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
++ VVAVGPG+ + G+ P+SVK G+ VLLP+YGG +V L DK Y L+ D ILG
Sbjct: 38 VLQATVVAVGPGSMNQKGEVQPMSVKVGEKVLLPQYGGTKVVLEDKDYFLFRDADILGKY 97
Query: 61 HD 62
D
Sbjct: 98 VD 99
>sp|Q2JUN8|CH10_SYNJA 10 kDa chaperonin OS=Synechococcus sp. (strain JA-3-3Ab) GN=groS
PE=3 SV=1
Length = 103
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
G+VVAVGPG R+ GK IP+ +K GD VL +Y G EVKLG +Y L + IL +
Sbjct: 46 GEVVAVGPGKRNDEGKLIPMELKAGDRVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103
>sp|Q2JL42|CH10_SYNJB 10 kDa chaperonin OS=Synechococcus sp. (strain JA-2-3B'a(2-13))
GN=groS PE=3 SV=1
Length = 103
Score = 58.2 bits (139), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/58 (50%), Positives = 37/58 (63%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
G+VVAVGPG R+ GK IP+ +K GD VL +Y G EVKLG +Y L + IL +
Sbjct: 46 GEVVAVGPGKRNDEGKLIPMELKAGDKVLYSKYAGTEVKLGSDEYVLLAERDILAIVQ 103
>sp|B3DZP6|CH10_METI4 10 kDa chaperonin OS=Methylacidiphilum infernorum (isolate V4)
GN=groS PE=3 SV=1
Length = 99
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 38/56 (67%)
Query: 6 VVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
V+AVGPG D NGK IP+ VK+GD VL+ +YGG EVK+ + + + ++ IL +
Sbjct: 43 VIAVGPGKLDENGKRIPIEVKKGDKVLISKYGGTEVKIDGESFQILREDDILAIIE 98
>sp|P35863|CH102_BRAJA 10 kDa chaperonin 2 OS=Bradyrhizobium japonicum (strain USDA 110)
GN=groS2 PE=2 SV=1
Length = 104
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLHD 62
G+V+AVGPG RD +GK IP+ V+ GD VL ++ G EVK+ ++ + ++ I+G L D
Sbjct: 37 QGEVIAVGPGGRDESGKLIPIDVRVGDRVLFGKWSGTEVKIDTQELLIMKESDIMGVLAD 96
>sp|P94819|CH10_HOLOB 10 kDa chaperonin OS=Holospora obtusa GN=groS PE=3 SV=1
Length = 96
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 38/59 (64%)
Query: 2 ISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
I G V+AVGPGARD G I + VK+GD VL ++ G EVKL + Y + ++ + GT+
Sbjct: 37 IEGTVIAVGPGARDPQGNLIALEVKQGDRVLFGKWSGTEVKLSGEDYIVMKESDVFGTI 95
>sp|B1ZMQ8|CH10_OPITP 10 kDa chaperonin OS=Opitutus terrae (strain DSM 11246 / PB90-1)
GN=groS PE=3 SV=1
Length = 98
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%)
Query: 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
KV+A+G G + +GK P VK GD VL+ +YGG EVKL +KKY L ++ ILG +
Sbjct: 40 EAKVIALGTGKKGEDGKVTPFEVKVGDRVLISKYGGTEVKLDEKKYTLVREDDILGVIE 98
>sp|A8ZU47|CH10_DESOH 10 kDa chaperonin OS=Desulfococcus oleovorans (strain DSM 6200 /
Hxd3) GN=groS PE=3 SV=1
Length = 95
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 2 ISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
I GKV+AVG G +GK IP+ VK+GD VL +YGG EVK+ ++Y + ++ ILG L
Sbjct: 36 IEGKVMAVGNGRLGEDGKLIPLEVKKGDRVLFGKYGGTEVKMDGQEYLIMREDDILGILE 95
>sp|P60367|CH102_RHOPA 10 kDa chaperonin 2 OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=groS2 PE=3 SV=1
Length = 104
Score = 55.8 bits (133), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLHD 62
G++VAVGPG RD GK IP+ +K GD VL ++ G EVK+ K+ + ++ I+G + D
Sbjct: 37 QGEIVAVGPGGRDEAGKLIPIDLKVGDRVLFGKWSGTEVKIDGKELLIMKESDIMGVITD 96
>sp|P48224|CH10_EHRRW 10 kDa chaperonin OS=Ehrlichia ruminantium (strain Welgevonden)
GN=groS PE=3 SV=1
Length = 94
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 58
GKVVAVGPG+ + NG IP+++K GD V ++ G EV+ DKKY + ++ I+
Sbjct: 37 GKVVAVGPGSYNNNGNLIPMTLKVGDVVFYRQWAGNEVEFSDKKYIVMKESDIIA 91
>sp|Q5FFZ0|CH10_EHRRG 10 kDa chaperonin OS=Ehrlichia ruminantium (strain Gardel)
GN=groS PE=3 SV=1
Length = 94
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 37/55 (67%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 58
GKVVAVGPG+ + NG IP+++K GD V ++ G EV+ DKKY + ++ I+
Sbjct: 37 GKVVAVGPGSYNNNGNLIPMTLKVGDVVFYRQWAGNEVEFSDKKYIVMKESDIIA 91
>sp|Q930X9|CH103_RHIME 10 kDa chaperonin 3 OS=Rhizobium meliloti (strain 1021) GN=groS3
PE=3 SV=1
Length = 105
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 41/59 (69%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLHD 62
G+V+AVGPG+RD +GK IP+ VK GDT+L ++ G EVK+ + + ++ I+G + +
Sbjct: 38 GEVIAVGPGSRDESGKLIPLDVKIGDTILFGKWSGTEVKIDGEDLLIMKESDIMGIVAN 96
>sp|Q5DC69|CH10_SCHJA 10 kDa heat shock protein, mitochondrial OS=Schistosoma japonicum
GN=SJCHGC01960 PE=3 SV=2
Length = 102
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 36/61 (59%)
Query: 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
++ VVA GPG ++ G+ +PV V GD V LPEYGG +V L D +Y L+ + IL
Sbjct: 41 VLEATVVAHGPGVKNEKGEVVPVCVTVGDKVFLPEYGGTKVVLEDTEYFLFRESDILAKF 100
Query: 61 H 61
Sbjct: 101 E 101
>sp|B9DMM3|CH10_STACT 10 kDa chaperonin OS=Staphylococcus carnosus (strain TM300)
GN=groS PE=3 SV=1
Length = 94
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 39/58 (67%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
GKV+AVGPG NG+ + VKEGDTV+ +Y G+EV++G+ KY + +E +L +
Sbjct: 37 GKVIAVGPGRLLDNGERVTPEVKEGDTVVFEQYAGSEVQVGEDKYLVISEEEVLAIVQ 94
>sp|O59804|CH10_SCHPO 10 kDa heat shock protein, mitochondrial OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=hsp10 PE=1 SV=1
Length = 104
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
L G+V++VG G + GK SV GD VLLP YGG+ +K+G+++Y LY D +L +
Sbjct: 43 LSEGRVISVGKGGYNKEGKLAQPSVAVGDRVLLPAYGGSNIKVGEEEYSLYRDHELLAII 102
Query: 61 HD 62
+
Sbjct: 103 KE 104
>sp|O67942|CH10_AQUAE 10 kDa chaperonin OS=Aquifex aeolicus (strain VF5) GN=groS PE=3
SV=1
Length = 122
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/60 (46%), Positives = 39/60 (65%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLHDH 63
GKVVAVGPG NG+ P+SVKEGD VL +Y G EV++ K Y + ++ +L + D+
Sbjct: 39 GKVVAVGPGKLLDNGELKPLSVKEGDVVLFNKYAGNEVEIEGKIYLVMSEDEVLAVVEDY 98
>sp|Q98IV4|CH101_RHILO 10 kDa chaperonin 1 OS=Rhizobium loti (strain MAFF303099)
GN=groS1 PE=3 SV=1
Length = 104
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+V+AVGPGARD NG +P+ VK GD +L ++ G EVK+ + + ++ I+G +
Sbjct: 38 GEVIAVGPGARDENGALVPLDVKAGDLILFGKWSGTEVKIDGEDLLIMKEADIMGVI 94
>sp|A3CKI0|CH10_STRSV 10 kDa chaperonin OS=Streptococcus sanguinis (strain SK36)
GN=groS PE=3 SV=1
Length = 93
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
+ +VVAVG G R +NG+ + +SVKEGD VL+ + G EVK G++ Y L + +IL +
Sbjct: 35 TAEVVAVGQGIRTLNGELVALSVKEGDKVLVENHAGVEVKDGEEAYLLVSEANILAVVE 93
>sp|Q98II0|CH102_RHILO 10 kDa chaperonin 2 OS=Rhizobium loti (strain MAFF303099)
GN=groS2 PE=3 SV=1
Length = 104
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 38/58 (65%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
G+V+A+GPGARD +GK P+ VK GD +L ++ G E+KL + + ++ ++G +
Sbjct: 38 GEVIAIGPGARDESGKLTPLDVKAGDRILFGKWSGTEIKLNGEDLLIMKESDVMGVIE 95
>sp|Q8KJ17|CH10_STRSA 10 kDa chaperonin OS=Streptococcus sanguis GN=groS PE=3 SV=1
Length = 93
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 39/59 (66%)
Query: 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
+ +VVAVG G R +NG+ + +SVKEG+ VL+ + G EVK GD+ Y L + +IL +
Sbjct: 35 TAEVVAVGQGIRTLNGELVSLSVKEGEKVLVENHAGVEVKDGDEAYLLVSEANILAVVE 93
>sp|B2ICU3|CH10_BEII9 10 kDa chaperonin OS=Beijerinckia indica subsp. indica (strain
ATCC 9039 / DSM 1715 / NCIB 8712) GN=groS PE=3 SV=1
Length = 95
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 38/57 (66%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+++AVGPG RD +GK IP+ VK GD +L ++ G EVK+ + + ++ ILG +
Sbjct: 38 GEIIAVGPGGRDESGKLIPLDVKAGDKILFGKWSGTEVKIDGQDLLIMKESDILGVV 94
>sp|Q64433|CH10_MOUSE 10 kDa heat shock protein, mitochondrial OS=Mus musculus GN=Hspe1
PE=1 SV=2
Length = 102
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 40/62 (64%)
Query: 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
++ VVAVG G + +G+ PVSVK GD VLLPEYGG +V L DK Y L+ D ILG
Sbjct: 41 VLQATVVAVGSGGKGKSGEIEPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDSDILGKY 100
Query: 61 HD 62
D
Sbjct: 101 VD 102
>sp|Q4FPA6|CH10_PELUB 10 kDa chaperonin OS=Pelagibacter ubique (strain HTCC1062)
GN=groS PE=3 SV=1
Length = 96
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 38/55 (69%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 58
GKV+AVG GA+ +GK IP+ VK GD VL ++ G E+K+ K+Y + ++ I+G
Sbjct: 38 GKVIAVGGGAKTEDGKLIPMDVKVGDKVLFGKWSGTEIKIDGKEYSIMKESDIMG 92
>sp|P38910|CH10_YEAST 10 kDa heat shock protein, mitochondrial OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=HSP10 PE=1
SV=1
Length = 106
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 28/61 (45%), Positives = 38/61 (62%), Gaps = 1/61 (1%)
Query: 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLG-DKKYHLYEDESILGT 59
L +VVAVGPG D NG + VK GD VL+P++GG+ +KLG D + L+ D IL
Sbjct: 43 LNQAEVVAVGPGFTDANGNKVVPQVKVGDQVLIPQFGGSTIKLGNDDEVILFRDAEILAK 102
Query: 60 L 60
+
Sbjct: 103 I 103
>sp|C5CC02|CH10_MICLC 10 kDa chaperonin OS=Micrococcus luteus (strain ATCC 4698 / DSM
20030 / JCM 1464 / NBRC 3333 / NCIMB 9278 / NCTC 2665 /
VKM Ac-2230) GN=groS PE=3 SV=1
Length = 98
Score = 52.8 bits (125), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 36/57 (63%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVAVGPG NG +PV V EGD VL +YGG EVK+G ++Y + +L +
Sbjct: 40 GQVVAVGPGRVAENGNRVPVDVAEGDVVLYSKYGGTEVKVGGEEYLVLSARDVLAVV 96
>sp|C4LKV3|CH10_CORK4 10 kDa chaperonin OS=Corynebacterium kroppenstedtii (strain DSM
44385 / CCUG 35717) GN=groS PE=3 SV=1
Length = 99
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 34/56 (60%)
Query: 6 VVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
VVAVGPG D NGK +P+ V EGD V+ +YGG E+K ++Y + +L +
Sbjct: 43 VVAVGPGRTDENGKRVPMDVAEGDVVIFSKYGGTEIKYAGEEYLILSQRDVLAVVE 98
>sp|P60366|CH101_RHOPA 10 kDa chaperonin 1 OS=Rhodopseudomonas palustris (strain ATCC
BAA-98 / CGA009) GN=groS1 PE=3 SV=1
Length = 98
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+V+AVGPG RD GK P+ VK GD VL ++ G E+KL ++ + ++ I+G +
Sbjct: 41 GQVIAVGPGGRDETGKLTPIDVKVGDRVLFGKWSGTEIKLDGEELLIMKESDIMGVV 97
>sp|Q1MQP9|CH10_LAWIP 10 kDa chaperonin OS=Lawsonia intracellularis (strain PHE/MN1-00)
GN=groS PE=3 SV=1
Length = 101
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVAVGPG +GK IP++VK GDTVL +Y G EVKL ++ + ++ IL +
Sbjct: 38 GEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94
>sp|O87887|CH10_LAWIN 10 kDa chaperonin OS=Lawsonia intracellularis GN=groS PE=3 SV=1
Length = 101
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 38/57 (66%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVAVGPG +GK IP++VK GDTVL +Y G EVKL ++ + ++ IL +
Sbjct: 38 GEVVAVGPGKHTDDGKLIPMAVKAGDTVLFNKYAGTEVKLDGVEHLVMREDDILAVI 94
>sp|P0A343|CH10_BRUSU 10 kDa chaperonin OS=Brucella suis biovar 1 (strain 1330) GN=groS
PE=2 SV=1
Length = 98
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG +
Sbjct: 41 GEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97
>sp|A9WXQ1|CH10_BRUSI 10 kDa chaperonin OS=Brucella suis (strain ATCC 23445 / NCTC
10510) GN=groS PE=3 SV=1
Length = 98
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG +
Sbjct: 41 GEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97
>sp|P0A342|CH10_BRUME 10 kDa chaperonin OS=Brucella melitensis biotype 1 (strain 16M /
ATCC 23456 / NCTC 10094) GN=groS PE=2 SV=1
Length = 98
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG +
Sbjct: 41 GEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97
>sp|C0RKD6|CH10_BRUMB 10 kDa chaperonin OS=Brucella melitensis biotype 2 (strain ATCC
23457) GN=groS PE=3 SV=1
Length = 98
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG +
Sbjct: 41 GEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97
>sp|A9MDV2|CH10_BRUC2 10 kDa chaperonin OS=Brucella canis (strain ATCC 23365 / NCTC
10854) GN=groS PE=3 SV=1
Length = 98
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG +
Sbjct: 41 GEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97
>sp|P0CB34|CH10_BRUAB 10 kDa chaperonin OS=Brucella abortus biovar 1 (strain 9-941)
GN=groS PE=3 SV=1
Length = 98
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG +
Sbjct: 41 GEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97
>sp|Q2YIJ2|CH10_BRUA2 10 kDa chaperonin OS=Brucella abortus (strain 2308) GN=groS PE=3
SV=1
Length = 98
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG +
Sbjct: 41 GEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97
>sp|B2SCZ5|CH10_BRUA1 10 kDa chaperonin OS=Brucella abortus (strain S19) GN=groS PE=2
SV=1
Length = 98
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG +
Sbjct: 41 GEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97
>sp|A5VTU2|CH10_BRUO2 10 kDa chaperonin OS=Brucella ovis (strain ATCC 25840 / 63/290 /
NCTC 10512) GN=groS PE=3 SV=1
Length = 98
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVA G GARD GK +P+ VK GD VL ++ G EVK+G + + ++ ILG +
Sbjct: 41 GEVVAAGAGARDEAGKLVPLDVKAGDRVLFGKWSGTEVKIGGEDLLIMKESDILGIV 97
>sp|Q3YRH3|CH10_EHRCJ 10 kDa chaperonin OS=Ehrlichia canis (strain Jake) GN=groS PE=3
SV=1
Length = 94
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILG 58
GKVVAVGPG + NG +P+++K G+ V ++ G E++ DKKY + ++ I+
Sbjct: 37 GKVVAVGPGVYNSNGNILPMNIKVGEVVFYRQWAGNEIEFNDKKYIVMKESDIIA 91
>sp|P26772|CH10_RAT 10 kDa heat shock protein, mitochondrial OS=Rattus norvegicus
GN=Hspe1 PE=1 SV=3
Length = 102
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 39/62 (62%)
Query: 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
++ VVAVG G + G+ PVSVK GD VLLPEYGG +V L DK Y L+ D ILG
Sbjct: 41 VLQATVVAVGSGGKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKY 100
Query: 61 HD 62
D
Sbjct: 101 VD 102
>sp|P61604|CH10_HUMAN 10 kDa heat shock protein, mitochondrial OS=Homo sapiens GN=HSPE1
PE=1 SV=2
Length = 102
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 40/62 (64%)
Query: 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
++ VVAVG G++ G+ PVSVK GD VLLPEYGG +V L DK Y L+ D ILG
Sbjct: 41 VLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKY 100
Query: 61 HD 62
D
Sbjct: 101 VD 102
>sp|P61603|CH10_BOVIN 10 kDa heat shock protein, mitochondrial OS=Bos taurus GN=HSPE1
PE=3 SV=2
Length = 102
Score = 52.4 bits (124), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/62 (53%), Positives = 40/62 (64%)
Query: 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
++ VVAVG G++ G+ PVSVK GD VLLPEYGG +V L DK Y L+ D ILG
Sbjct: 41 VLQATVVAVGSGSKGKGGEIQPVSVKVGDKVLLPEYGGTKVVLDDKDYFLFRDGDILGKY 100
Query: 61 HD 62
D
Sbjct: 101 VD 102
>sp|Q983S3|CH104_RHILO 10 kDa chaperonin 4 OS=Rhizobium loti (strain MAFF303099)
GN=groS4 PE=3 SV=1
Length = 98
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 38/57 (66%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+++AVG GARD +GK +P+ VK GD +L ++ G EVKL + + ++ I+G +
Sbjct: 41 GEIIAVGSGARDESGKLVPLDVKAGDRILFGKWSGTEVKLNGEDLLIMKESDIMGII 97
>sp|B6IU97|CH10_RHOCS 10 kDa chaperonin OS=Rhodospirillum centenum (strain ATCC 51521 /
SW) GN=groS PE=3 SV=1
Length = 103
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 38/58 (65%)
Query: 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
G+++AVG GARD +GK I + VK GD VL ++ G EVK+ +Y + ++ I+G L
Sbjct: 38 GEIIAVGSGARDESGKLIALDVKVGDRVLFGKWSGTEVKIDGVEYLIMKESDIMGVLE 95
>sp|Q1H4F1|CH10_METFK 10 kDa chaperonin OS=Methylobacillus flagellatus (strain KT /
ATCC 51484 / DSM 6875) GN=groS PE=3 SV=1
Length = 96
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61
G+V+AVGPG +D NGK IP+ VK GD VL +Y G VK+ ++ + ++ ILG +
Sbjct: 37 QGEVIAVGPGKKDDNGKSIPLDVKVGDKVLFGKYAGQAVKVNGEEVLVLREDDILGIVE 95
>sp|B8DVZ4|CH10_BIFA0 10 kDa chaperonin OS=Bifidobacterium animalis subsp. lactis
(strain AD011) GN=groS PE=3 SV=1
Length = 98
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLHD 62
G+V+AVGPG RD GK +P+ VK GD VL +YGG EV ++Y + +L ++D
Sbjct: 39 QGEVLAVGPGRRDDEGKRVPMDVKVGDKVLYSKYGGTEVHFKGEEYLIVSARDLLAVVND 98
>sp|Q0BKF6|CH10_FRATO 10 kDa chaperonin OS=Francisella tularensis subsp. holarctica
(strain OSU18) GN=groS PE=3 SV=1
Length = 95
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVAVG G + NG +P+ VK GD VL +Y G+EVK+GD+ + +E I+G +
Sbjct: 37 QGEVVAVGNGKKLDNGTTLPMDVKVGDKVLFGKYSGSEVKVGDETLLMMREEDIMGII 94
>sp|P94797|CH10_FRATH 10 kDa chaperonin OS=Francisella tularensis subsp. holarctica
(strain LVS) GN=groS PE=1 SV=1
Length = 95
Score = 51.6 bits (122), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 38/58 (65%)
Query: 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60
G+VVAVG G + NG +P+ VK GD VL +Y G+EVK+GD+ + +E I+G +
Sbjct: 37 QGEVVAVGNGKKLDNGTTLPMDVKVGDKVLFGKYSGSEVKVGDETLLMMREEDIMGII 94
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.141 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 28,244,548
Number of Sequences: 539616
Number of extensions: 1049461
Number of successful extensions: 2613
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 680
Number of HSP's successfully gapped in prelim test: 19
Number of HSP's that attempted gapping in prelim test: 1901
Number of HSP's gapped (non-prelim): 701
length of query: 63
length of database: 191,569,459
effective HSP length: 35
effective length of query: 28
effective length of database: 172,682,899
effective search space: 4835121172
effective search space used: 4835121172
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 55 (25.8 bits)