Query 045997
Match_columns 63
No_of_seqs 120 out of 1034
Neff 5.9
Searched_HMMs 29240
Date Mon Mar 25 13:11:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045997.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045997hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3nx6_A 10KDA chaperonin; bacte 99.9 1.1E-27 3.7E-32 144.3 9.2 61 1-61 35-95 (95)
2 1p3h_A 10 kDa chaperonin; beta 99.9 1.6E-27 5.3E-32 144.5 8.5 61 2-62 38-99 (99)
3 1pcq_O Groes protein; chaperon 99.9 4.5E-27 1.6E-31 142.0 8.6 61 1-61 35-96 (97)
4 1we3_O CPN10(groes); chaperoni 99.9 2.2E-27 7.7E-32 144.0 6.8 61 1-61 40-100 (100)
5 1g31_A GP31; chaperone, CO-cha 99.5 3.6E-15 1.2E-19 91.7 0.6 53 2-61 47-111 (111)
6 3uko_A Alcohol dehydrogenase c 93.4 0.15 5.2E-06 34.5 5.1 23 3-34 71-93 (378)
7 3gms_A Putative NADPH:quinone 92.6 0.14 4.9E-06 34.0 4.0 41 3-57 71-111 (340)
8 4dup_A Quinone oxidoreductase; 92.4 0.14 4.7E-06 34.4 3.8 41 3-57 94-134 (353)
9 1zsy_A Mitochondrial 2-enoyl t 92.1 0.29 9.9E-06 32.8 5.0 41 3-57 93-134 (357)
10 4a27_A Synaptic vesicle membra 91.5 0.2 7E-06 33.5 3.8 41 3-57 69-109 (349)
11 3m6i_A L-arabinitol 4-dehydrog 91.4 0.15 5E-06 34.2 3.0 23 3-34 81-103 (363)
12 2dq4_A L-threonine 3-dehydroge 91.1 0.17 5.8E-06 33.7 3.0 23 3-34 66-88 (343)
13 1wly_A CAAR, 2-haloacrylate re 91.0 0.17 5.9E-06 33.5 3.0 40 3-56 69-109 (333)
14 1f8f_A Benzyl alcohol dehydrog 91.0 0.17 5.9E-06 34.0 3.0 23 3-34 68-90 (371)
15 3two_A Mannitol dehydrogenase; 90.9 0.18 6E-06 33.7 3.0 23 3-34 67-89 (348)
16 4eez_A Alcohol dehydrogenase 1 90.9 0.18 6.2E-06 33.4 3.0 23 3-34 63-85 (348)
17 2d8a_A PH0655, probable L-thre 90.8 0.19 6.4E-06 33.6 3.0 23 3-34 70-92 (348)
18 3qwb_A Probable quinone oxidor 90.7 0.19 6.5E-06 33.3 3.0 24 3-35 72-95 (334)
19 2cf5_A Atccad5, CAD, cinnamyl 90.6 0.2 6.7E-06 33.7 3.1 22 3-33 72-93 (357)
20 1cdo_A Alcohol dehydrogenase; 90.6 0.19 6.6E-06 33.8 3.0 23 3-34 71-93 (374)
21 4a0s_A Octenoyl-COA reductase/ 90.5 0.2 6.7E-06 34.6 3.0 23 3-34 118-140 (447)
22 1pl8_A Human sorbitol dehydrog 90.5 0.2 6.9E-06 33.6 3.0 23 3-34 72-94 (356)
23 3goh_A Alcohol dehydrogenase, 90.5 0.21 7.2E-06 32.8 3.1 41 3-57 67-110 (315)
24 1p0f_A NADP-dependent alcohol 90.5 0.2 6.9E-06 33.7 3.0 23 3-34 71-93 (373)
25 3jv7_A ADH-A; dehydrogenase, n 90.5 0.21 7.1E-06 33.2 3.0 23 3-34 65-87 (345)
26 1yqd_A Sinapyl alcohol dehydro 90.5 0.2 7E-06 33.8 3.0 22 3-33 79-100 (366)
27 1e3j_A NADP(H)-dependent ketos 90.4 0.21 7.2E-06 33.4 3.0 23 3-34 69-91 (352)
28 2fzw_A Alcohol dehydrogenase c 90.4 0.21 7.2E-06 33.6 3.0 23 3-34 69-91 (373)
29 2j8z_A Quinone oxidoreductase; 90.4 0.4 1.4E-05 32.1 4.4 42 3-57 88-129 (354)
30 2jhf_A Alcohol dehydrogenase E 90.4 0.21 7.2E-06 33.6 3.0 23 3-34 70-92 (374)
31 3s2e_A Zinc-containing alcohol 90.3 0.22 7.5E-06 33.0 3.1 22 3-33 66-87 (340)
32 1e3i_A Alcohol dehydrogenase, 90.3 0.21 7.3E-06 33.6 3.0 23 3-34 70-92 (376)
33 2h6e_A ADH-4, D-arabinose 1-de 90.3 0.21 7.2E-06 33.3 3.0 22 3-34 68-89 (344)
34 3jyn_A Quinone oxidoreductase; 90.2 0.22 7.7E-06 32.9 3.0 41 3-57 66-107 (325)
35 1kol_A Formaldehyde dehydrogen 90.1 0.22 7.4E-06 33.9 2.9 23 3-34 70-92 (398)
36 2hcy_A Alcohol dehydrogenase 1 90.1 0.23 7.9E-06 33.1 3.0 23 3-34 69-91 (347)
37 2dph_A Formaldehyde dismutase; 90.0 0.22 7.5E-06 34.0 2.9 23 3-34 69-91 (398)
38 3fpc_A NADP-dependent alcohol 90.0 0.22 7.7E-06 33.2 2.9 23 3-34 62-84 (352)
39 4dvj_A Putative zinc-dependent 90.0 0.24 8.1E-06 33.5 3.0 41 3-57 90-133 (363)
40 1gu7_A Enoyl-[acyl-carrier-pro 90.0 0.24 8.2E-06 33.1 3.0 41 3-57 81-122 (364)
41 3tqh_A Quinone oxidoreductase; 90.0 0.23 7.8E-06 32.8 2.9 42 3-58 76-121 (321)
42 3krt_A Crotonyl COA reductase; 89.9 0.23 8E-06 34.5 3.0 23 3-34 126-148 (456)
43 1rjw_A ADH-HT, alcohol dehydro 89.8 0.25 8.5E-06 32.9 3.0 23 3-34 64-86 (339)
44 3uog_A Alcohol dehydrogenase; 89.8 0.23 7.9E-06 33.4 2.9 23 3-34 92-114 (363)
45 2vn8_A Reticulon-4-interacting 89.7 0.25 8.7E-06 33.3 3.0 42 3-57 103-146 (375)
46 1uuf_A YAHK, zinc-type alcohol 89.7 0.24 8.2E-06 33.6 2.9 23 3-34 85-107 (369)
47 3fbg_A Putative arginate lyase 89.6 0.26 9E-06 32.9 3.0 42 3-57 68-111 (346)
48 1jvb_A NAD(H)-dependent alcoho 89.6 0.25 8.6E-06 32.9 2.9 22 3-33 71-92 (347)
49 1qor_A Quinone oxidoreductase; 89.4 0.28 9.7E-06 32.3 3.0 41 3-57 66-107 (327)
50 2eih_A Alcohol dehydrogenase; 89.4 0.27 9.3E-06 32.7 3.0 23 3-34 66-88 (343)
51 1h2b_A Alcohol dehydrogenase; 89.4 0.26 9.1E-06 33.1 2.9 22 3-33 82-103 (359)
52 3ip1_A Alcohol dehydrogenase, 89.3 0.33 1.1E-05 33.2 3.4 28 3-34 100-128 (404)
53 4ej6_A Putative zinc-binding d 89.3 0.28 9.7E-06 33.2 3.0 23 3-34 84-106 (370)
54 3gaz_A Alcohol dehydrogenase s 89.1 0.29 9.8E-06 32.7 2.9 44 3-57 72-117 (343)
55 3iup_A Putative NADPH:quinone 89.1 0.41 1.4E-05 32.5 3.7 41 3-57 99-139 (379)
56 1yb5_A Quinone oxidoreductase; 88.9 0.28 9.5E-06 33.0 2.8 41 3-57 96-137 (351)
57 1piw_A Hypothetical zinc-type 88.6 0.37 1.3E-05 32.3 3.2 23 3-33 71-93 (360)
58 3pi7_A NADH oxidoreductase; gr 88.2 0.24 8.2E-06 33.1 2.1 41 3-57 88-132 (349)
59 2c0c_A Zinc binding alcohol de 87.8 0.45 1.6E-05 32.0 3.3 40 3-56 92-131 (362)
60 3mlq_E Transcription-repair co 87.8 0.56 1.9E-05 25.8 3.1 31 24-54 2-40 (71)
61 2b5w_A Glucose dehydrogenase; 87.7 0.37 1.3E-05 32.3 2.8 21 3-34 66-86 (357)
62 3gqv_A Enoyl reductase; medium 87.1 0.45 1.5E-05 32.1 2.9 23 3-34 71-93 (371)
63 3slk_A Polyketide synthase ext 85.7 1.1 3.6E-05 33.9 4.5 40 3-57 273-312 (795)
64 4a2c_A Galactitol-1-phosphate 85.5 0.7 2.4E-05 30.5 3.2 24 3-35 62-85 (346)
65 4eye_A Probable oxidoreductase 85.5 0.63 2.1E-05 31.0 2.9 40 3-57 87-126 (342)
66 3pqh_A Gene product 138; beta- 81.5 3 0.0001 25.7 4.6 34 2-43 19-52 (127)
67 1vj0_A Alcohol dehydrogenase, 80.3 1.4 4.8E-05 29.8 3.1 28 3-34 80-107 (380)
68 3es4_A Uncharacterized protein 79.6 3.4 0.00012 24.6 4.3 34 16-51 77-112 (116)
69 1at0_A 17-hedgehog; developmen 73.8 3.4 0.00011 25.0 3.2 26 14-39 9-35 (145)
70 2ozi_A Hypothetical protein RP 71.2 6.7 0.00023 22.0 3.9 39 5-43 40-81 (98)
71 3nx4_A Putative oxidoreductase 70.0 3.6 0.00012 26.7 2.9 42 3-57 66-110 (324)
72 2lqk_A Transcriptional regulat 71.6 1 3.5E-05 24.6 0.0 31 24-54 6-44 (70)
73 4e2q_A Ureidoglycine aminohydr 68.4 13 0.00045 24.9 5.5 49 3-53 209-260 (266)
74 2z1c_A Hydrogenase expression/ 64.9 7.7 0.00026 21.5 3.2 32 3-34 6-45 (75)
75 1sfn_A Conserved hypothetical 63.1 21 0.00073 22.7 5.6 45 7-53 192-239 (246)
76 2qnk_A 3-hydroxyanthranilate 3 58.7 22 0.00074 24.5 5.2 49 4-60 209-257 (286)
77 3bu7_A Gentisate 1,2-dioxygena 58.1 20 0.0007 25.2 5.1 43 10-54 323-367 (394)
78 2j3h_A NADP-dependent oxidored 57.0 5.8 0.0002 26.0 2.0 22 3-33 79-102 (345)
79 3v2d_V 50S ribosomal protein L 56.4 27 0.00093 20.3 5.3 30 23-55 12-44 (101)
80 3d3r_A Hydrogenase assembly ch 54.9 11 0.00036 22.3 2.7 32 3-34 27-69 (103)
81 2d40_A Z3393, putative gentisa 53.3 18 0.00061 24.7 4.1 43 10-55 297-339 (354)
82 2cu3_A Unknown function protei 52.8 11 0.00037 19.4 2.3 19 17-35 35-59 (64)
83 1wv3_A Similar to DNA segregat 51.6 28 0.00095 22.6 4.6 37 16-55 139-178 (238)
84 2opk_A Hypothetical protein; p 51.0 8.7 0.0003 21.6 1.9 21 23-43 75-95 (112)
85 1tt7_A YHFP; alcohol dehydroge 50.8 11 0.00037 24.5 2.6 42 3-57 70-114 (330)
86 1xa0_A Putative NADPH dependen 48.8 13 0.00044 24.2 2.7 41 3-56 69-112 (328)
87 1ypr_A Profilin; actin-binding 48.6 14 0.00049 21.7 2.7 17 39-55 58-74 (125)
88 3d9y_A Profilin; yeast, actin- 48.4 14 0.00049 21.7 2.7 17 39-55 60-76 (127)
89 1sq4_A GLXB, glyoxylate-induce 47.4 49 0.0017 21.6 5.4 47 5-53 216-265 (278)
90 3bcw_A Uncharacterized protein 45.9 36 0.0012 19.7 4.1 16 22-37 88-103 (123)
91 3myx_A Uncharacterized protein 45.9 16 0.00054 24.1 2.8 34 16-51 202-237 (238)
92 1acf_A Profilin I; protein bin 45.7 17 0.00058 21.3 2.7 17 39-55 58-74 (125)
93 4b7c_A Probable oxidoreductase 44.6 28 0.00094 22.6 3.8 36 3-57 79-114 (336)
94 1rc6_A Hypothetical protein YL 43.6 35 0.0012 21.7 4.1 31 22-52 219-253 (261)
95 3lwc_A Uncharacterized protein 43.5 44 0.0015 19.0 4.2 21 22-42 78-98 (119)
96 2do3_A Transcription elongatio 42.6 38 0.0013 18.5 3.6 30 24-53 17-51 (69)
97 1iz6_A Initiation factor 5A; S 42.1 55 0.0019 19.6 4.7 39 16-54 51-92 (138)
98 2q5w_D Molybdopterin convertin 41.8 23 0.00077 18.4 2.6 10 24-33 61-70 (77)
99 1ksk_A Ribosomal small subunit 41.6 16 0.00053 23.2 2.2 25 24-51 43-68 (234)
100 3iuw_A Activating signal coint 41.4 10 0.00036 21.5 1.2 13 24-36 37-49 (83)
101 1vio_A Ribosomal small subunit 40.7 11 0.00038 24.2 1.3 25 24-51 42-67 (243)
102 3nw4_A Gentisate 1,2-dioxygena 40.4 44 0.0015 23.4 4.5 46 7-55 305-350 (368)
103 1gpp_A Endonuclease PI-SCEI; h 39.8 36 0.0012 22.9 3.8 32 10-41 15-47 (237)
104 4h7l_A Uncharacterized protein 39.8 66 0.0023 19.9 4.9 39 10-51 77-115 (157)
105 3po0_A Small archaeal modifier 38.0 22 0.00075 19.1 2.2 15 24-38 73-88 (89)
106 1qjo_A Dihydrolipoamide acetyl 38.0 16 0.00055 19.0 1.6 15 17-31 14-28 (80)
107 2zb4_A Prostaglandin reductase 37.9 17 0.00058 23.9 2.0 26 24-56 95-120 (357)
108 1bkb_A Translation initiation 37.8 64 0.0022 19.2 5.2 39 16-54 53-94 (136)
109 3cpf_A Eukaryotic translation 37.3 55 0.0019 19.6 4.1 40 16-55 51-93 (138)
110 2k1g_A Lipoprotein SPR; soluti 37.3 12 0.00042 22.5 1.1 19 17-35 59-78 (135)
111 1zrr_A E-2/E-2' protein; nicke 37.1 29 0.00099 21.7 2.9 36 7-42 106-143 (179)
112 2qgh_A Diaminopimelate decarbo 37.1 57 0.0019 22.3 4.6 13 24-36 363-375 (425)
113 1fm0_D Molybdopterin convertin 37.0 23 0.0008 18.5 2.1 15 24-38 65-80 (81)
114 4axo_A EUTQ, ethanolamine util 36.6 72 0.0025 19.4 5.2 16 22-37 103-118 (151)
115 1x82_A Glucose-6-phosphate iso 36.4 44 0.0015 20.5 3.6 27 17-43 115-141 (190)
116 1qd7_I S17 ribosomal protein; 36.4 12 0.0004 21.5 0.9 14 23-36 48-61 (89)
117 2cdc_A Glucose dehydrogenase g 36.0 14 0.00047 24.6 1.3 11 24-34 78-88 (366)
118 3ef4_A Pseudoazurin, blue copp 35.5 24 0.00082 20.8 2.2 18 19-36 18-37 (124)
119 1xne_A Hypothetical protein PF 35.4 17 0.0006 21.5 1.5 12 24-35 34-45 (113)
120 3n2b_A Diaminopimelate decarbo 35.3 62 0.0021 22.5 4.6 14 22-35 379-392 (441)
121 3nul_A Profilin I; cytoskeleto 35.1 26 0.0009 20.7 2.3 18 37-54 60-77 (130)
122 2qqr_A JMJC domain-containing 34.4 32 0.0011 20.6 2.6 32 23-54 4-40 (118)
123 3p42_A Predicted protein; beta 34.3 25 0.00087 22.9 2.3 29 4-36 175-203 (236)
124 3pjy_A Hypothetical signal pep 34.1 13 0.00043 22.6 0.8 16 23-38 116-131 (136)
125 2kl0_A Putative thiamin biosyn 33.9 22 0.00075 19.0 1.7 21 17-37 36-62 (73)
126 2ot2_A Hydrogenase isoenzymes 33.5 15 0.00052 21.0 1.0 32 3-34 6-51 (90)
127 2hd9_A UPF0310 protein PH1033; 33.2 17 0.00059 22.0 1.3 11 24-34 34-44 (145)
128 1j58_A YVRK protein; cupin, de 33.2 44 0.0015 22.3 3.5 27 17-43 118-144 (385)
129 1z6h_A Biotin/lipoyl attachmen 33.0 25 0.00085 17.7 1.8 11 51-61 58-68 (72)
130 1ok0_A Tendamistat, alpha-amyl 32.9 17 0.00059 20.3 1.2 24 16-39 38-63 (74)
131 4ejq_A Kinesin-like protein KI 32.9 30 0.001 20.9 2.3 21 16-36 114-136 (154)
132 1nz9_A Transcription antitermi 32.7 25 0.00085 17.7 1.7 17 23-39 3-21 (58)
133 1sef_A Conserved hypothetical 31.8 76 0.0026 20.3 4.3 31 22-52 222-256 (274)
134 1vjk_A Molybdopterin convertin 31.5 22 0.00075 19.7 1.5 11 24-34 82-92 (98)
135 2e6z_A Transcription elongatio 31.4 25 0.00085 18.1 1.6 17 23-39 6-24 (59)
136 2xvs_A Tetratricopeptide repea 31.3 45 0.0015 21.1 3.1 30 25-54 120-153 (166)
137 4dov_A ORC1, origin recognitio 31.3 29 0.001 22.0 2.2 16 22-37 36-51 (163)
138 1plc_A Plastocyanin; electron 31.1 27 0.00094 18.7 1.8 19 19-37 13-33 (99)
139 3gt2_A Putative uncharacterize 31.0 30 0.001 20.5 2.1 19 17-35 81-100 (142)
140 1ueb_A EF-P, TT0860, elongatio 30.9 74 0.0025 20.1 4.1 39 16-54 45-86 (184)
141 1bxv_A Plastocyanin; copper pr 30.9 28 0.00097 18.1 1.8 28 6-35 4-33 (91)
142 1v3u_A Leukotriene B4 12- hydr 30.9 68 0.0023 20.7 4.0 11 24-34 82-92 (333)
143 1iuz_A Plastocyanin; electron 30.5 26 0.00088 19.0 1.6 19 19-37 14-34 (98)
144 2qcp_X Cation efflux system pr 30.4 22 0.00075 19.5 1.3 13 22-34 51-63 (80)
145 3tu6_A Pseudoazurin (blue copp 30.2 25 0.00085 20.7 1.6 19 19-37 19-39 (127)
146 1yby_A Translation elongation 29.9 68 0.0023 20.9 3.8 39 16-54 75-116 (215)
147 1tyg_B YJBS; alpha beta barrel 29.9 32 0.0011 19.2 2.0 19 17-35 58-82 (87)
148 2jov_A Hypothetical protein CP 29.8 22 0.00074 20.3 1.2 22 17-39 42-63 (85)
149 2p5d_A UPF0310 protein mjecl36 29.8 21 0.00073 21.6 1.3 11 24-34 37-47 (147)
150 2xdp_A Lysine-specific demethy 29.4 32 0.0011 20.7 2.0 34 22-55 4-42 (123)
151 2z0t_A Putative uncharacterize 29.3 23 0.00078 20.9 1.3 10 24-33 33-42 (109)
152 2vv5_A MSCS, small-conductance 28.9 36 0.0012 22.4 2.4 21 24-44 129-149 (286)
153 3r8n_Q 30S ribosomal protein S 28.9 18 0.00062 20.2 0.8 13 23-35 48-60 (80)
154 1k8m_A E2 component of branche 28.8 32 0.0011 18.9 1.8 16 16-31 17-32 (93)
155 2vqa_A SLL1358 protein, MNCA; 28.6 59 0.002 21.4 3.4 28 17-44 92-119 (361)
156 1vr3_A Acireductone dioxygenas 28.4 65 0.0022 20.5 3.5 29 18-46 124-152 (191)
157 3fm8_A Kinesin-like protein KI 28.4 40 0.0014 19.9 2.3 21 16-36 94-116 (124)
158 2vb2_X Copper protein, cation 28.4 25 0.00084 19.7 1.3 12 23-34 60-71 (88)
159 3mxn_B RECQ-mediated genome in 28.4 85 0.0029 19.7 3.9 31 3-33 64-107 (150)
160 1b3i_A PETE protein, protein ( 28.0 33 0.0011 18.2 1.8 13 23-35 21-33 (97)
161 2d5d_A Methylmalonyl-COA decar 28.0 35 0.0012 17.1 1.8 15 17-31 13-27 (74)
162 2gim_A Plastocyanin; beta shee 27.9 33 0.0011 18.5 1.8 16 19-34 16-33 (106)
163 3erx_A Pseudoazurin; copper pr 27.6 23 0.00078 20.8 1.1 13 23-35 23-35 (123)
164 3nec_A Profilin, inflammatory 27.2 36 0.0012 21.2 2.1 19 37-55 85-103 (166)
165 1o5u_A Novel thermotoga mariti 27.2 38 0.0013 18.8 2.0 20 22-41 69-88 (101)
166 2kij_A Copper-transporting ATP 27.1 62 0.0021 18.7 3.0 12 24-35 41-52 (124)
167 2v8f_A Profilin-2, profilin II 27.1 49 0.0017 19.8 2.6 15 39-53 62-76 (140)
168 2plt_A Plastocyanin; electron 27.0 32 0.0011 18.3 1.6 19 19-37 14-34 (98)
169 2vqe_Q 30S ribosomal protein S 26.9 17 0.00059 21.4 0.5 13 24-36 50-62 (105)
170 2ker_A Parvulustat, alpha-amyl 26.5 15 0.00053 20.7 0.2 22 16-37 36-58 (78)
171 4egx_A Kinesin-like protein KI 26.3 43 0.0015 20.9 2.3 21 16-36 144-166 (184)
172 3dm3_A Replication factor A; p 26.2 82 0.0028 17.8 3.4 10 24-33 66-75 (105)
173 1pcs_A Plastocyanin; electron 26.2 38 0.0013 18.0 1.8 18 19-36 15-34 (98)
174 2l5t_A Lipoamide acyltransfera 26.0 39 0.0013 17.4 1.8 17 16-32 14-30 (77)
175 1uhe_A Aspartate 1-decarboxyla 25.8 16 0.00054 21.5 0.2 15 24-38 52-66 (97)
176 1y3t_A Hypothetical protein YX 25.5 98 0.0034 19.8 4.0 23 22-44 258-280 (337)
177 2pbd_P Profilin-1, profilin I; 25.4 55 0.0019 19.5 2.6 15 39-53 61-75 (139)
178 1paz_A Pseudoazurin precursor; 25.3 34 0.0012 19.8 1.6 13 23-35 23-35 (123)
179 1pmy_A Pseudoazurin; electron 25.2 35 0.0012 19.8 1.6 14 23-36 23-36 (123)
180 1vc3_B L-aspartate-alpha-decar 25.0 17 0.00057 21.3 0.2 14 24-37 54-67 (96)
181 1knw_A Diaminopimelate decarbo 24.7 1.3E+02 0.0045 20.5 4.8 12 24-35 363-374 (425)
182 3udc_A Small-conductance mecha 24.7 1.3E+02 0.0044 19.6 4.6 20 24-43 128-147 (285)
183 2rdq_A 1-deoxypentalenic acid 24.7 45 0.0015 21.1 2.2 20 17-36 207-226 (288)
184 1hr0_W Translation initiation 24.6 32 0.0011 18.2 1.3 14 23-36 45-58 (71)
185 1f56_A Plantacyanin; cupredoxi 24.5 31 0.001 19.3 1.2 14 24-37 18-31 (91)
186 2a1x_A Phytanoyl-COA dioxygena 24.4 56 0.0019 21.0 2.7 19 18-36 213-231 (308)
187 1kdj_A Plastocyanin; electron 24.3 31 0.0011 18.5 1.3 28 7-36 3-32 (102)
188 3dwg_C 9.5 kDa culture filtrat 24.1 40 0.0014 18.2 1.7 16 23-38 76-92 (93)
189 3a5z_B EF-P, elongation factor 24.0 61 0.0021 20.6 2.7 39 16-54 50-91 (191)
190 3tre_A EF-P, elongation factor 23.7 93 0.0032 19.7 3.6 39 16-54 50-91 (191)
191 1ryj_A Unknown; beta/alpha pro 23.7 39 0.0013 17.6 1.5 12 24-35 54-65 (70)
192 1dcz_A Transcarboxylase 1.3S s 23.6 56 0.0019 16.6 2.1 15 17-31 16-30 (77)
193 2if6_A Hypothetical protein YI 23.5 34 0.0012 20.9 1.4 13 23-35 3-15 (186)
194 2l55_A SILB,silver efflux prot 23.3 34 0.0012 18.8 1.3 12 23-34 46-57 (82)
195 2cbp_A Cucumber basic protein; 23.3 33 0.0011 19.3 1.2 14 24-37 23-36 (96)
196 2q18_X 2-keto-3-deoxy-D-arabin 23.2 37 0.0013 22.5 1.7 29 1-33 246-274 (293)
197 2gpr_A Glucose-permease IIA co 23.2 44 0.0015 20.6 1.9 23 10-32 80-102 (154)
198 3plx_B Aspartate 1-decarboxyla 23.1 19 0.00065 21.3 0.2 15 24-38 53-67 (102)
199 1f0z_A THis protein; ubiquitin 23.1 26 0.00088 18.0 0.7 18 17-34 37-60 (66)
200 2k5p_A THis protein, thiamine- 23.0 31 0.0011 18.7 1.1 20 17-36 40-65 (78)
201 2opw_A Phyhd1 protein; double- 22.9 43 0.0015 21.3 1.9 18 19-36 226-243 (291)
202 1byp_A Protein (plastocyanin); 22.9 32 0.0011 18.3 1.1 18 19-36 13-32 (99)
203 3pbi_A Invasion protein; pepti 22.8 46 0.0016 21.5 2.0 19 17-35 150-169 (214)
204 1id2_A Amicyanin; beta barrel, 22.8 42 0.0014 18.5 1.6 14 23-36 36-49 (106)
205 3crk_C Dihydrolipoyllysine-res 22.8 37 0.0012 18.2 1.3 16 16-31 18-33 (87)
206 2hc8_A PACS, cation-transporti 22.8 52 0.0018 18.8 2.1 23 17-43 63-85 (113)
207 3aqy_A Beta-1,3-glucan-binding 22.7 70 0.0024 18.5 2.6 26 22-51 66-91 (106)
208 2ov0_A Amicyanin; beta-sandwic 22.7 43 0.0015 18.4 1.6 14 23-36 35-48 (105)
209 2pyt_A Ethanolamine utilizatio 22.4 57 0.002 18.9 2.2 16 22-37 94-109 (133)
210 3awu_B MELC; tyrosinase, binar 22.4 78 0.0027 19.5 2.9 19 37-55 70-88 (134)
211 2y78_A Peptidyl-prolyl CIS-tra 22.3 53 0.0018 19.1 2.1 11 24-34 42-52 (133)
212 2gbs_A Hypothetical protein RP 22.1 32 0.0011 21.3 1.1 12 24-35 42-53 (145)
213 2eif_A IF-5A, protein (eukaryo 22.0 1.2E+02 0.0041 18.0 3.7 39 16-54 55-96 (136)
214 1ou8_A Stringent starvation pr 22.0 1.3E+02 0.0046 17.8 4.6 45 17-61 36-94 (111)
215 1ws8_A Mavicyanin; oxidized fo 22.0 36 0.0012 19.6 1.2 15 24-38 29-43 (109)
216 1x9u_A Umecyanin; cupredoxin, 22.0 38 0.0013 19.8 1.4 14 24-37 29-42 (116)
217 2c45_A Aspartate 1-decarboxyla 22.0 32 0.0011 21.4 1.0 15 24-38 78-92 (139)
218 3d82_A Cupin 2, conserved barr 21.8 94 0.0032 15.9 3.8 22 22-43 69-90 (102)
219 2jkg_A Profilin; proline-rich 21.8 83 0.0028 20.1 3.0 20 36-55 89-109 (179)
220 2in0_A Endonuclease PI-MTUI; h 21.7 63 0.0022 18.5 2.3 22 17-38 79-100 (139)
221 4hci_A Cupredoxin 1; structura 21.6 49 0.0017 17.9 1.7 17 17-33 22-40 (100)
222 1o9y_A HRCQ2; secretory protei 21.6 63 0.0021 17.6 2.2 23 24-46 35-59 (84)
223 3vab_A Diaminopimelate decarbo 21.4 1.3E+02 0.0045 20.8 4.3 12 24-35 382-393 (443)
224 3r8s_R 50S ribosomal protein L 21.4 1.3E+02 0.0044 17.3 4.5 22 23-44 12-36 (103)
225 1zce_A Hypothetical protein AT 21.3 36 0.0012 21.3 1.2 12 24-35 43-54 (155)
226 1jer_A Cucumber stellacyanin; 21.2 40 0.0014 20.4 1.4 13 24-36 31-43 (138)
227 2dnc_A Pyruvate dehydrogenase 21.2 45 0.0015 18.5 1.5 16 16-31 20-35 (98)
228 1ghj_A E2, E2, the dihydrolipo 21.2 35 0.0012 17.7 1.0 16 16-31 14-29 (79)
229 1dgw_Y Canavalin; duplicated s 21.1 1.2E+02 0.0042 17.0 5.2 32 21-52 6-38 (93)
230 4h1h_A LMO1638 protein; MCCF-l 21.1 30 0.001 23.3 0.8 15 19-33 3-17 (327)
231 3fz3_A Prunin; TREE NUT allerg 21.1 2.5E+02 0.0087 20.7 6.7 23 17-39 434-457 (531)
232 2eyq_A TRCF, transcription-rep 21.1 89 0.003 24.6 3.6 30 24-53 479-516 (1151)
233 1zx5_A Mannosephosphate isomer 21.1 1.7E+02 0.0057 19.5 4.6 22 23-45 267-288 (300)
234 2og0_A Excisionase; protein-DN 20.9 53 0.0018 16.7 1.6 21 16-36 26-46 (52)
235 2kuf_A PKNB, serine/threonine- 20.7 1.2E+02 0.0042 17.2 3.5 37 3-39 44-82 (139)
236 1vq8_T 50S ribosomal protein L 20.6 75 0.0026 19.0 2.5 18 22-39 40-59 (120)
237 3ie4_A GRAM-negative binding p 20.5 62 0.0021 18.8 2.1 23 22-48 65-87 (107)
238 1wid_A DNA-binding protein RAV 20.4 42 0.0014 19.7 1.3 12 24-35 91-102 (130)
239 3j21_U 50S ribosomal protein L 20.4 80 0.0027 18.9 2.6 18 22-39 43-62 (121)
240 2dne_A Dihydrolipoyllysine-res 20.4 42 0.0014 19.0 1.3 16 16-31 20-35 (108)
241 2yvl_A TRMI protein, hypotheti 20.3 41 0.0014 20.3 1.3 12 24-35 3-14 (248)
242 2k32_A A; NMR {Campylobacter j 20.2 55 0.0019 18.1 1.8 15 17-31 9-23 (116)
243 2ux6_A Pseudoazurin; type-1 co 20.0 39 0.0013 19.5 1.1 13 23-35 23-35 (122)
No 1
>3nx6_A 10KDA chaperonin; bacterial blight, XOO4289, groes, xanthomonas oryzae PV. ORY KACC10331, chaperone; 1.97A {Xanthomonas oryzae PV} SCOP: b.35.1.0
Probab=99.95 E-value=1.1e-27 Score=144.30 Aligned_cols=61 Identities=31% Similarity=0.517 Sum_probs=59.1
Q ss_pred CceEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEEEEec
Q 045997 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61 (63)
Q Consensus 1 ~~~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIla~i~ 61 (63)
+++|+|+|||||+++++|+++|++||+||+|+|++|+|++|+++|++|+++|++||||+++
T Consensus 35 ~~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vl~~ky~Gtevk~dg~ey~i~re~DILavie 95 (95)
T 3nx6_A 35 STKGEVVAIGAGKPLDNGSLHAPVVKVGDKVIYGQYAGSSYKSEGVEYKVLREDDILAVIG 95 (95)
T ss_dssp CEEEEEEEECSCEECTTSCEECCSCCTTCEEEECTTCSEEEEETTEEEEEEEGGGEEEECC
T ss_pred ccccEEEEECCCeECCCCCEEccccCCCCEEEECCcCCeEEEECCEEEEEEEHHHEEEEeC
Confidence 4789999999999999999999999999999999999999999999999999999999985
No 2
>1p3h_A 10 kDa chaperonin; beta barrel, acidic cluster, flexible loop, structural genomics, PSI, protein structure initiative; 2.80A {Mycobacterium tuberculosis} SCOP: b.35.1.1 PDB: 1hx5_A 1lep_A 1p82_A 1p83_A
Probab=99.95 E-value=1.6e-27 Score=144.48 Aligned_cols=61 Identities=43% Similarity=0.784 Sum_probs=59.1
Q ss_pred ceEEEEEECCCeeCCCC-eEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEEEEecc
Q 045997 2 ISGKVVAVGPGARDVNG-KFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLHD 62 (63)
Q Consensus 2 ~~G~VvAVG~G~~~~~G-~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIla~i~~ 62 (63)
++|+|+|||||+++++| +++|++||+||+|+|++|+|++|+++|++|+++|++||||++++
T Consensus 38 ~~G~VvAVG~G~~~~~G~~~~p~~VkvGD~Vlf~ky~Gtevk~dgeey~i~re~DIlavi~~ 99 (99)
T 1p3h_A 38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYSKYGGTEIKYNGEEYLILSARDVLAVVSK 99 (99)
T ss_dssp EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEECTTCEEEEETTEEEEEEEGGGEEEEEEC
T ss_pred ceEEEEEECCCcCcCCCCEEEccccCCCCEEEECCcCCeEEEECCEEEEEEEhHhEEEEeeC
Confidence 78999999999999999 99999999999999999999999999999999999999999874
No 3
>1pcq_O Groes protein; chaperone; HET: ADP; 2.81A {Escherichia coli} SCOP: b.35.1.1 PDB: 1gru_O 1aon_O* 1pf9_O* 1svt_O* 1sx4_O* 2c7c_O 2c7d_O
Probab=99.94 E-value=4.5e-27 Score=142.00 Aligned_cols=61 Identities=31% Similarity=0.532 Sum_probs=59.1
Q ss_pred CceEEEEEECCCeeCCCCeEEeeeccCCCEEEeCC-CCceEEEECCEEEEEEecCCEEEEec
Q 045997 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPE-YGGAEVKLGDKKYHLYEDESILGTLH 61 (63)
Q Consensus 1 ~~~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~-y~g~ev~~~g~~y~i~~e~DIla~i~ 61 (63)
+++|+|+|||||+++++|+++|++||+||+|+|++ |+|++|+++|++|+++|++||||+++
T Consensus 35 p~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~k~y~Gtevk~dgeey~i~re~DIlavv~ 96 (97)
T 1pcq_O 35 STRGEVLAVGNGRILENGEVKPLDVKVGDIVIFNDGYGVKSEKIDNEEVLIMSESDILAIVE 96 (97)
T ss_dssp CCEEEEEEECSEECTTSSSCEECSCCTTCEEEECCCSSCEEEEETTEEEEEEEGGGEEEEEE
T ss_pred CcccEEEEEcCceecCCCCEEecccCCCCEEEECCccCCeEEEECCEEEEEEEhHHEEEEec
Confidence 47899999999999999999999999999999999 99999999999999999999999986
No 4
>1we3_O CPN10(groes); chaperonin, chaperone, groel, HSP60, HSP10, folding, ADP, ATP; HET: ADP; 2.80A {Thermus thermophilus} SCOP: b.35.1.1 PDB: 1wf4_o* 1wnr_A
Probab=99.94 E-value=2.2e-27 Score=144.02 Aligned_cols=61 Identities=38% Similarity=0.730 Sum_probs=59.0
Q ss_pred CceEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEEEEec
Q 045997 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTLH 61 (63)
Q Consensus 1 ~~~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIla~i~ 61 (63)
+++|+|+|||||+++++|+++|++||+||+|+|++|+|++|+++|++|+++|++||||+++
T Consensus 40 p~~G~VvAVG~G~~~~~G~~~p~~VkvGD~Vlf~ky~Gtevk~dgeeyli~re~DIlavi~ 100 (100)
T 1we3_O 40 PQKGKVIAVGTGRVLENGQRVPLEVKEGDIVVFAKYGGTEIEIDGEEYVILSERDLLAVLQ 100 (100)
T ss_dssp CSEEEESCCCCCEECTTSCEECCSCCTTCEEEECTTCSEEEECSSCEEEEECTTTEEEEEC
T ss_pred CcCCEEEEECCCcCCCCCCEEeeecCCCCEEEECCCCCeEEEECCEEEEEEEhHHEEEEeC
Confidence 4789999999999999999999999999999999999999999999999999999999985
No 5
>1g31_A GP31; chaperone, CO-chaperonin, groes, in VIVO protein folding, bacteriophage T4; 2.30A {Enterobacteria phage T4} SCOP: b.35.1.1 PDB: 2cgt_O
Probab=99.48 E-value=3.6e-15 Score=91.69 Aligned_cols=53 Identities=19% Similarity=0.097 Sum_probs=46.7
Q ss_pred ceEEEEEECCCeeCCCCeEEeeeccCCCEEEeCC--CC--------ceEEEECC--EEEEEEecCCEEEEec
Q 045997 2 ISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPE--YG--------GAEVKLGD--KKYHLYEDESILGTLH 61 (63)
Q Consensus 2 ~~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~--y~--------g~ev~~~g--~~y~i~~e~DIla~i~ 61 (63)
+.|+|+|||||+ .|+.||+||+|+|++ |+ +++++.++ ++|++++++||||+++
T Consensus 47 ~~g~VvAVG~g~-------~~~~vKvGD~Vl~~kg~~~nvp~p~vi~g~i~~~~~~e~y~i~~~~dIlavy~ 111 (111)
T 1g31_A 47 ELCVVHSVGPDV-------PEGFCEVGDLTSLPVGQIRNVPHPFVALGLKQPKEIKQKFVTCHYKAIPCLYK 111 (111)
T ss_dssp EEEEEEEECTTS-------CTTSCCTTCEEEEEGGGCEEECCHHHHTTSSCGGGCCCCEEEEEGGGCCEECC
T ss_pred ceEEEEEECCCC-------ccccccCCCEEEECCCccccCCCcceeeeEEccCCcccEEEEEehHHeEEEeC
Confidence 689999999997 245799999999954 77 88999998 9999999999999874
No 6
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=93.36 E-value=0.15 Score=34.46 Aligned_cols=23 Identities=39% Similarity=0.596 Sum_probs=19.1
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|+..
T Consensus 71 ~G~V~~vG~~v~---------~~~vGdrV~~~ 93 (378)
T 3uko_A 71 AGIVESVGEGVT---------EVQAGDHVIPC 93 (378)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEeCCCCC---------cCCCCCEEEEe
Confidence 599999999753 49999999854
No 7
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=92.58 E-value=0.14 Score=34.01 Aligned_cols=41 Identities=22% Similarity=0.159 Sum_probs=28.0
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|+.....|. =.+|++++++.+.
T Consensus 71 ~G~V~~vG~~v~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 111 (340)
T 3gms_A 71 VGIVENVGAFVS---------RELIGKRVLPLRGEGT-----WQEYVKTSADFVV 111 (340)
T ss_dssp EEEEEEECTTSC---------GGGTTCEEEECSSSCS-----SBSEEEEEGGGEE
T ss_pred EEEEEEeCCCCC---------CCCCCCEEEecCCCcc-----ceeEEEcCHHHeE
Confidence 699999999753 5999999985322221 1467777766554
No 8
>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}
Probab=92.43 E-value=0.14 Score=34.41 Aligned_cols=41 Identities=41% Similarity=0.602 Sum_probs=28.0
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|......|. =.+|+.++++.+.
T Consensus 94 ~G~V~~vG~~v~---------~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 134 (353)
T 4dup_A 94 SGEIVGVGPGVS---------GYAVGDKVCGLANGGA-----YAEYCLLPAGQIL 134 (353)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEecCCCc-----eeeEEEEcHHHcE
Confidence 599999999753 5999999985332221 1467777766554
No 9
>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A
Probab=92.05 E-value=0.29 Score=32.82 Aligned_cols=41 Identities=29% Similarity=0.525 Sum_probs=27.7
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCC-ceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYG-GAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~-g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|+..... |. =.+|+.++++.+.
T Consensus 93 ~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~-----~aey~~v~~~~~~ 134 (357)
T 1zsy_A 93 VAQVVAVGSNVT---------GLKPGDWVIPANAGLGT-----WRTEAVFSEEALI 134 (357)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEESSSCSCC-----SBSEEEEEGGGEE
T ss_pred EEEEEEeCCCCC---------CCCCCCEEEEcCCCCcc-----ceeEEecCHHHcE
Confidence 599999999752 58999999875321 11 1366666665543
No 10
>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}
Probab=91.52 E-value=0.2 Score=33.45 Aligned_cols=41 Identities=24% Similarity=0.138 Sum_probs=27.2
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|+.....|. =.+|++++++.+.
T Consensus 69 ~G~V~~vG~~v~---------~~~~GdrV~~~~~~G~-----~aey~~v~~~~~~ 109 (349)
T 4a27_A 69 SGIVEALGDSVK---------GYEIGDRVMAFVNYNA-----WAEVVCTPVEFVY 109 (349)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred EEEEEEeCCCCC---------CCCCCCEEEEecCCCc-----ceEEEEecHHHeE
Confidence 599999999753 5999999985332221 1456666665543
No 11
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=91.43 E-value=0.15 Score=34.20 Aligned_cols=23 Identities=43% Similarity=0.765 Sum_probs=19.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 81 ~G~V~~vG~~v~---------~~~vGdrV~~~ 103 (363)
T 3m6i_A 81 AGEVIAVHPSVK---------SIKVGDRVAIE 103 (363)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEe
Confidence 599999999753 59999999864
No 12
>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*
Probab=91.06 E-value=0.17 Score=33.73 Aligned_cols=23 Identities=57% Similarity=0.774 Sum_probs=19.5
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 66 ~G~V~~vG~~v~---------~~~vGdrV~~~ 88 (343)
T 2dq4_A 66 SGVVEAVGPGVR---------RPQVGDHVSLE 88 (343)
T ss_dssp EEEEEEECTTCC---------SSCTTCEEEEC
T ss_pred eEEEEEECCCCC---------cCCCCCEEEEC
Confidence 599999999753 59999999974
No 13
>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}
Probab=91.04 E-value=0.17 Score=33.48 Aligned_cols=40 Identities=30% Similarity=0.366 Sum_probs=26.8
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCC-CceEEEECCEEEEEEecCCE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEY-GGAEVKLGDKKYHLYEDESI 56 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y-~g~ev~~~g~~y~i~~e~DI 56 (63)
.|+|+++|++.. .+++||+|.+... .|. =.+|+.++++.+
T Consensus 69 ~G~V~~vG~~v~---------~~~~GdrV~~~~~~~G~-----~aey~~v~~~~~ 109 (333)
T 1wly_A 69 AAVVEEVGPGVT---------DFTVGERVCTCLPPLGA-----YSQERLYPAEKL 109 (333)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECSSSCCC-----SBSEEEEEGGGC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEecCCCCc-----ceeEEEecHHHc
Confidence 589999999753 5899999976432 111 146666666544
No 14
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=90.98 E-value=0.17 Score=34.03 Aligned_cols=23 Identities=39% Similarity=0.726 Sum_probs=19.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 68 ~G~V~~vG~~v~---------~~~~GdrV~~~ 90 (371)
T 1f8f_A 68 SGIIEAIGPNVT---------ELQVGDHVVLS 90 (371)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred ceEEEEeCCCCC---------CCCCCCEEEec
Confidence 599999999753 59999999864
No 15
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=90.93 E-value=0.18 Score=33.69 Aligned_cols=23 Identities=35% Similarity=0.537 Sum_probs=19.1
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 67 ~G~V~~vG~~v~---------~~~vGdrV~~~ 89 (348)
T 3two_A 67 AGIIKEVGKGVK---------KFKIGDVVGVG 89 (348)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEECCCCC---------CCCCCCEEEEe
Confidence 599999999753 49999999763
No 16
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=90.90 E-value=0.18 Score=33.36 Aligned_cols=23 Identities=30% Similarity=0.472 Sum_probs=19.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 63 aG~V~~vG~~V~---------~~~~GdrV~~~ 85 (348)
T 4eez_A 63 IGIVKEIGADVS---------SLQVGDRVSVA 85 (348)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEE
T ss_pred EEEEEEECceee---------ecccCCeEeec
Confidence 599999999763 59999999764
No 17
>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*
Probab=90.77 E-value=0.19 Score=33.58 Aligned_cols=23 Identities=39% Similarity=0.796 Sum_probs=19.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 70 ~G~V~~vG~~v~---------~~~vGdrV~~~ 92 (348)
T 2d8a_A 70 AGEVVEIGPGVE---------GIEVGDYVSVE 92 (348)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEECCCCC---------cCCCCCEEEEc
Confidence 599999999752 59999999875
No 18
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=90.72 E-value=0.19 Score=33.26 Aligned_cols=24 Identities=42% Similarity=0.560 Sum_probs=19.7
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPE 35 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 35 (63)
.|+|+++|++.. .+++||+|.+..
T Consensus 72 ~G~V~~vG~~v~---------~~~~GdrV~~~~ 95 (334)
T 3qwb_A 72 SGTVVAKGKGVT---------NFEVGDQVAYIS 95 (334)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEee
Confidence 599999999753 599999998643
No 19
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=90.65 E-value=0.2 Score=33.71 Aligned_cols=22 Identities=36% Similarity=0.515 Sum_probs=18.7
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEe
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLL 33 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~ 33 (63)
.|+|+++|++.. .+++||+|.+
T Consensus 72 ~G~V~~vG~~v~---------~~~vGdrV~~ 93 (357)
T 2cf5_A 72 VGEVVEVGSDVS---------KFTVGDIVGV 93 (357)
T ss_dssp EEEEEEECSSCC---------SCCTTCEEEE
T ss_pred eEEEEEECCCCC---------CCCCCCEEEE
Confidence 599999999753 5999999985
No 20
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=90.62 E-value=0.19 Score=33.81 Aligned_cols=23 Identities=35% Similarity=0.647 Sum_probs=19.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 71 ~G~V~~vG~~V~---------~~~vGdrV~~~ 93 (374)
T 1cdo_A 71 AGIVESVGPGVT---------EFQPGEKVIPL 93 (374)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEECCCCc---------cCCCCCEEEeC
Confidence 599999999753 58999999865
No 21
>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A
Probab=90.51 E-value=0.2 Score=34.65 Aligned_cols=23 Identities=48% Similarity=0.674 Sum_probs=19.5
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|++||++.. .+++||+|...
T Consensus 118 ~G~V~~vG~~V~---------~~~vGDrV~~~ 140 (447)
T 4a0s_A 118 SGVVVRTGIGVR---------RWKPGDHVIVH 140 (447)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEECCCCC---------CCCCCCEEEEe
Confidence 599999999753 59999999974
No 22
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=90.50 E-value=0.2 Score=33.56 Aligned_cols=23 Identities=39% Similarity=0.631 Sum_probs=19.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 72 ~G~V~~vG~~V~---------~~~vGdrV~~~ 94 (356)
T 1pl8_A 72 SGTVEKVGSSVK---------HLKPGDRVAIE 94 (356)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEe
Confidence 599999999753 58999999864
No 23
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=90.50 E-value=0.21 Score=32.81 Aligned_cols=41 Identities=20% Similarity=0.336 Sum_probs=28.2
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCC---CceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEY---GGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y---~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|..... .|. =.+|++++++.+.
T Consensus 67 ~G~V~~vG~~v~---------~~~vGdrV~~~~~~~~~G~-----~aey~~v~~~~~~ 110 (315)
T 3goh_A 67 AGVIVKVGAKVD---------SKMLGRRVAYHTSLKRHGS-----FAEFTVLNTDRVM 110 (315)
T ss_dssp EEEEEEECTTSC---------GGGTTCEEEEECCTTSCCS-----SBSEEEEETTSEE
T ss_pred EEEEEEeCCCCC---------CCCCCCEEEEeCCCCCCcc-----cccEEEEcHHHhc
Confidence 599999999753 5999999997431 110 1467777776554
No 24
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=90.48 E-value=0.2 Score=33.70 Aligned_cols=23 Identities=39% Similarity=0.612 Sum_probs=19.5
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 71 ~G~V~~vG~~v~---------~~~vGdrV~~~ 93 (373)
T 1p0f_A 71 VGVVESIGAGVT---------CVKPGDKVIPL 93 (373)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEECCCCC---------ccCCCCEEEEC
Confidence 599999999753 59999999875
No 25
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=90.47 E-value=0.21 Score=33.25 Aligned_cols=23 Identities=30% Similarity=0.492 Sum_probs=19.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 65 ~G~V~~vG~~v~---------~~~vGdrV~~~ 87 (345)
T 3jv7_A 65 VGTVAELGEGVT---------GFGVGDAVAVY 87 (345)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEe
Confidence 599999999753 59999999874
No 26
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=90.46 E-value=0.2 Score=33.81 Aligned_cols=22 Identities=36% Similarity=0.560 Sum_probs=18.7
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEe
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLL 33 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~ 33 (63)
.|+|+++|++.. .+++||+|..
T Consensus 79 ~G~V~~vG~~V~---------~~~vGDrV~~ 100 (366)
T 1yqd_A 79 VGEVTEVGSKVK---------KVNVGDKVGV 100 (366)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEE
T ss_pred EEEEEEECCCCC---------cCCCCCEEEE
Confidence 599999999753 5999999985
No 27
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=90.40 E-value=0.21 Score=33.37 Aligned_cols=23 Identities=43% Similarity=0.703 Sum_probs=19.2
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 69 ~G~V~~vG~~v~---------~~~vGdrV~~~ 91 (352)
T 1e3j_A 69 SGTVVKVGKNVK---------HLKKGDRVAVE 91 (352)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEeCCCCC---------CCCCCCEEEEc
Confidence 599999999753 59999999864
No 28
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=90.39 E-value=0.21 Score=33.56 Aligned_cols=23 Identities=43% Similarity=0.648 Sum_probs=19.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 69 ~G~V~~vG~~V~---------~~~vGdrV~~~ 91 (373)
T 2fzw_A 69 AGIVESVGEGVT---------KLKAGDTVIPL 91 (373)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cEEEEEECCCCC---------CCCCCCEEEEC
Confidence 599999999753 59999999865
No 29
>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*
Probab=90.37 E-value=0.4 Score=32.13 Aligned_cols=42 Identities=31% Similarity=0.502 Sum_probs=27.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. ..+++||+|......|. =.+|++++++.+.
T Consensus 88 ~G~V~~vG~~v~--------~~~~vGdrV~~~~~~G~-----~aey~~v~~~~~~ 129 (354)
T 2j8z_A 88 SGHVAELGPGCQ--------GHWKIGDTAMALLPGGG-----QAQYVTVPEGLLM 129 (354)
T ss_dssp EEEEEEECSCC----------CCCTTCEEEEECSSCC-----SBSEEEEEGGGEE
T ss_pred EEEEEEECCCcC--------CCCCCCCEEEEecCCCc-----ceeEEEeCHHHcE
Confidence 599999999751 15899999986432221 1467777666543
No 30
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=90.36 E-value=0.21 Score=33.63 Aligned_cols=23 Identities=35% Similarity=0.638 Sum_probs=19.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 70 ~G~V~~vG~~v~---------~~~vGdrV~~~ 92 (374)
T 2jhf_A 70 AGIVESIGEGVT---------TVRPGDKVIPL 92 (374)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEECCCCC---------CCCCCCEEEEC
Confidence 599999999753 59999999865
No 31
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=90.35 E-value=0.22 Score=33.05 Aligned_cols=22 Identities=55% Similarity=0.714 Sum_probs=18.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEe
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLL 33 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~ 33 (63)
.|+|+++|++.. .+++||+|.+
T Consensus 66 ~G~V~~vG~~v~---------~~~vGdrV~~ 87 (340)
T 3s2e_A 66 VGYVSAVGSGVS---------RVKEGDRVGV 87 (340)
T ss_dssp EEEEEEECSSCC---------SCCTTCEEEE
T ss_pred eEEEEEECCCCC---------cCCCCCEEEe
Confidence 599999999753 5999999954
No 32
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=90.34 E-value=0.21 Score=33.64 Aligned_cols=23 Identities=43% Similarity=0.689 Sum_probs=19.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 70 ~G~V~~vG~~v~---------~~~vGdrV~~~ 92 (376)
T 1e3i_A 70 AGIVESVGPGVT---------NFKPGDKVIPF 92 (376)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred cEEEEEECCCCc---------cCCCCCEEEEC
Confidence 599999999753 59999999864
No 33
>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}
Probab=90.29 E-value=0.21 Score=33.26 Aligned_cols=22 Identities=41% Similarity=0.643 Sum_probs=18.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++ . .+++||+|+..
T Consensus 68 ~G~V~~vG~~-~---------~~~~GdrV~~~ 89 (344)
T 2h6e_A 68 AGTIVEVGEL-A---------KVKKGDNVVVY 89 (344)
T ss_dssp EEEEEEECTT-C---------CCCTTCEEEEC
T ss_pred eEEEEEECCC-C---------CCCCCCEEEEC
Confidence 5899999997 3 58999999653
No 34
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=90.23 E-value=0.22 Score=32.87 Aligned_cols=41 Identities=29% Similarity=0.371 Sum_probs=28.2
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCC-CCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPE-YGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~-y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|.+.. ..|. =.+|+.++++.+.
T Consensus 66 ~G~V~~vG~~v~---------~~~~GdrV~~~~~~~G~-----~aey~~v~~~~~~ 107 (325)
T 3jyn_A 66 AGVVEAVGDEVT---------RFKVGDRVAYGTGPLGA-----YSEVHVLPEANLV 107 (325)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEESSSSSCC-----SBSEEEEEGGGEE
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEecCCCcc-----ccceEEecHHHeE
Confidence 599999999753 599999999754 1221 1467777766543
No 35
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=90.11 E-value=0.22 Score=33.85 Aligned_cols=23 Identities=30% Similarity=0.618 Sum_probs=19.1
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 70 ~G~V~~vG~~v~---------~~~vGDrV~~~ 92 (398)
T 1kol_A 70 TGEVIEKGRDVE---------NLQIGDLVSVP 92 (398)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEECC
T ss_pred EEEEEEECCCCC---------cCCCCCEEEEC
Confidence 599999999753 59999999863
No 36
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=90.09 E-value=0.23 Score=33.09 Aligned_cols=23 Identities=30% Similarity=0.433 Sum_probs=19.1
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 69 ~G~V~~vG~~v~---------~~~~GdrV~~~ 91 (347)
T 2hcy_A 69 AGVVVGMGENVK---------GWKIGDYAGIK 91 (347)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEECCCCC---------CCcCCCEEEEe
Confidence 589999999753 58999999863
No 37
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.04 E-value=0.22 Score=33.95 Aligned_cols=23 Identities=35% Similarity=0.580 Sum_probs=19.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 69 ~G~V~~vG~~v~---------~~~vGDrV~~~ 91 (398)
T 2dph_A 69 TGEVVEKGSDVE---------LMDIGDLVSVP 91 (398)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEECC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEc
Confidence 599999999753 59999999963
No 38
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=89.99 E-value=0.22 Score=33.23 Aligned_cols=23 Identities=43% Similarity=0.797 Sum_probs=19.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|++||++.. .+++||+|...
T Consensus 62 ~G~V~~vG~~v~---------~~~vGdrV~~~ 84 (352)
T 3fpc_A 62 VGEVVEVGSEVK---------DFKPGDRVVVP 84 (352)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEECCCCC---------cCCCCCEEEEc
Confidence 599999999753 59999999963
No 39
>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}
Probab=89.98 E-value=0.24 Score=33.52 Aligned_cols=41 Identities=29% Similarity=0.552 Sum_probs=28.0
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCC---CCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPE---YGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~---y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|++.. ..|. =.+|++++++.+.
T Consensus 90 ~G~V~~vG~~v~---------~~~vGdrV~~~~~~~~~G~-----~aey~~v~~~~~~ 133 (363)
T 4dvj_A 90 AGIVSAVGPDVT---------LFRPGDEVFYAGSIIRPGT-----NAEFHLVDERIVG 133 (363)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECCCTTSCCS-----CBSEEEEEGGGCE
T ss_pred EEEEEEeCCCCC---------CCCCCCEEEEccCCCCCcc-----ceEEEEeCHHHee
Confidence 599999999753 599999999742 1111 1477777766543
No 40
>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A
Probab=89.97 E-value=0.24 Score=33.09 Aligned_cols=41 Identities=24% Similarity=0.298 Sum_probs=27.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCC-CceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEY-GGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y-~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|..... .|. =.+|++++++.+.
T Consensus 81 ~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~-----~aey~~v~~~~~~ 122 (364)
T 1gu7_A 81 LFEVIKVGSNVS---------SLEAGDWVIPSHVNFGT-----WRTHALGNDDDFI 122 (364)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEESSSCCCC-----SBSEEEEEGGGEE
T ss_pred EEEEEEeCCCCC---------cCCCCCEEEecCCCCCc-----chheEecCHHHeE
Confidence 589999999753 5899999986531 110 1366666665543
No 41
>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}
Probab=89.96 E-value=0.23 Score=32.77 Aligned_cols=42 Identities=24% Similarity=0.401 Sum_probs=28.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCC-C---CceEEEECCEEEEEEecCCEEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPE-Y---GGAEVKLGDKKYHLYEDESILG 58 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~-y---~g~ev~~~g~~y~i~~e~DIla 58 (63)
.|+|+++|++.. .+++||+|+... + .|. =.+|+.++++.+..
T Consensus 76 ~G~V~~vG~~v~---------~~~~GdrV~~~~~~~~~~G~-----~aey~~v~~~~~~~ 121 (321)
T 3tqh_A 76 SGEVIELGSDVN---------NVNIGDKVMGIAGFPDHPCC-----YAEYVCASPDTIIQ 121 (321)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEECSTTTCCCC-----SBSEEEECGGGEEE
T ss_pred EEEEEEeCCCCC---------CCCCCCEEEEccCCCCCCCc-----ceEEEEecHHHhcc
Confidence 599999999753 599999998532 2 121 14677777766543
No 42
>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A
Probab=89.89 E-value=0.23 Score=34.53 Aligned_cols=23 Identities=35% Similarity=0.666 Sum_probs=19.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|+..
T Consensus 126 ~G~Vv~vG~~v~---------~~~vGdrV~~~ 148 (456)
T 3krt_A 126 AGVVLRTGPGVN---------AWQAGDEVVAH 148 (456)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEe
Confidence 599999999753 49999999973
No 43
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=89.85 E-value=0.25 Score=32.90 Aligned_cols=23 Identities=48% Similarity=0.761 Sum_probs=19.1
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 64 ~G~V~~vG~~v~---------~~~vGdrV~~~ 86 (339)
T 1rjw_A 64 VGIVEEVGPGVT---------HLKVGDRVGIP 86 (339)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEECCCCC---------cCCCCCEEEEe
Confidence 599999999752 58999999863
No 44
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=89.84 E-value=0.23 Score=33.42 Aligned_cols=23 Identities=39% Similarity=0.553 Sum_probs=19.5
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 92 ~G~V~~vG~~v~---------~~~vGDrV~~~ 114 (363)
T 3uog_A 92 SGVVEAVGKSVT---------RFRPGDRVIST 114 (363)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEe
Confidence 599999999753 49999999975
No 45
>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}
Probab=89.73 E-value=0.25 Score=33.31 Aligned_cols=42 Identities=19% Similarity=0.217 Sum_probs=27.8
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECC--EEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGD--KKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g--~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|....... .+| .+|++++++.+.
T Consensus 103 ~G~V~~vG~~V~---------~~~vGDrV~~~~~~~----~~G~~aey~~v~~~~~~ 146 (375)
T 2vn8_A 103 SGVVMECGLDVK---------YFKPGDEVWAAVPPW----KQGTLSEFVVVSGNEVS 146 (375)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEECCTT----SCCSSBSEEEEEGGGEE
T ss_pred eEEEEEeCCCCC---------CCCCCCEEEEecCCC----CCccceeEEEEcHHHee
Confidence 599999999752 599999998643100 011 467777766543
No 46
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.72 E-value=0.24 Score=33.63 Aligned_cols=23 Identities=39% Similarity=0.488 Sum_probs=19.1
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 85 ~G~V~~vG~~V~---------~~~vGDrV~~~ 107 (369)
T 1uuf_A 85 VGRVVAVGDQVE---------KYAPGDLVGVG 107 (369)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEC
T ss_pred eEEEEEECCCCC---------CCCCCCEEEEc
Confidence 599999999753 59999999853
No 47
>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}
Probab=89.65 E-value=0.26 Score=32.88 Aligned_cols=42 Identities=21% Similarity=0.328 Sum_probs=27.9
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECC--EEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGD--KKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g--~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|+...... .+| .+|++++++.+.
T Consensus 68 ~G~V~~vG~~v~---------~~~~GdrV~~~~~~~----~~G~~aey~~v~~~~~~ 111 (346)
T 3fbg_A 68 IGVVESVGNEVT---------MFNQGDIVYYSGSPD----QNGSNAEYQLINERLVA 111 (346)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECCCTT----SCCSSBSEEEEEGGGEE
T ss_pred EEEEEEeCCCCC---------cCCCCCEEEEcCCCC----CCcceeEEEEEChHHeE
Confidence 599999999753 499999999743100 011 467777666543
No 48
>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*
Probab=89.62 E-value=0.25 Score=32.93 Aligned_cols=22 Identities=32% Similarity=0.505 Sum_probs=18.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEe
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLL 33 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~ 33 (63)
.|+|+++|++.. .+++||+|+.
T Consensus 71 ~G~V~~vG~~v~---------~~~vGdrV~~ 92 (347)
T 1jvb_A 71 AGKIEEVGDEVV---------GYSKGDLVAV 92 (347)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEE
T ss_pred eEEEEEECCCCC---------CCCCCCEEEe
Confidence 589999999753 5899999964
No 49
>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=89.42 E-value=0.28 Score=32.26 Aligned_cols=41 Identities=29% Similarity=0.400 Sum_probs=27.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC-CCCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP-EYGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~-~y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|.+. ...|. =.+|+.++++.+.
T Consensus 66 ~G~V~~vG~~v~---------~~~~GdrV~~~g~~~G~-----~aey~~v~~~~~~ 107 (327)
T 1qor_A 66 AGIVSKVGSGVK---------HIKAGDRVVYAQSALGA-----YSSVHNIIADKAA 107 (327)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEESCCSSCC-----SBSEEEEEGGGEE
T ss_pred EEEEEEECCCCC---------CCCCCCEEEECCCCCce-----eeeEEEecHHHcE
Confidence 599999999753 58999999654 11111 1467777766543
No 50
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=89.39 E-value=0.27 Score=32.70 Aligned_cols=23 Identities=48% Similarity=0.762 Sum_probs=19.2
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|.+.
T Consensus 66 ~G~V~~vG~~v~---------~~~vGdrV~~~ 88 (343)
T 2eih_A 66 SGVVDAVGPGVE---------GFAPGDEVVIN 88 (343)
T ss_dssp EEEEEEECSSCC---------SCCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEC
Confidence 599999999752 58999999953
No 51
>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1
Probab=89.38 E-value=0.26 Score=33.09 Aligned_cols=22 Identities=32% Similarity=0.628 Sum_probs=18.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEe
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLL 33 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~ 33 (63)
.|+|+++|++.. .+++||+|+.
T Consensus 82 ~G~V~~vG~~v~---------~~~vGdrV~~ 103 (359)
T 1h2b_A 82 VGYIEEVAEGVE---------GLEKGDPVIL 103 (359)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEE
T ss_pred eEEEEEECCCCC---------CCCCCCEEEe
Confidence 599999999753 5899999964
No 52
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=89.29 E-value=0.33 Score=33.19 Aligned_cols=28 Identities=32% Similarity=0.415 Sum_probs=20.3
Q ss_pred eEEEEEECCCeeCC-CCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDV-NGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~-~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.... .+ ..+++||+|+..
T Consensus 100 ~G~V~~vG~~v~~~~~~----~~~~vGdrV~~~ 128 (404)
T 3ip1_A 100 SGVVVEAGPEAINRRTN----KRFEIGEPVCAE 128 (404)
T ss_dssp EEEEEEECTTCEETTTT----EECCTTCEEEEC
T ss_pred eEEEEEECCCccccccC----CCCCCCCEEEEC
Confidence 59999999975211 10 269999999974
No 53
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=89.29 E-value=0.28 Score=33.20 Aligned_cols=23 Identities=26% Similarity=0.426 Sum_probs=19.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 84 ~G~V~~vG~~v~---------~~~vGdrV~~~ 106 (370)
T 4ej6_A 84 CGIVVEAGSAVR---------DIAPGARITGD 106 (370)
T ss_dssp EEEEEEECTTCC---------SSCTTCEEEEC
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEC
Confidence 599999999753 59999999863
No 54
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=89.10 E-value=0.29 Score=32.71 Aligned_cols=44 Identities=30% Similarity=0.416 Sum_probs=28.1
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECC--EEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGD--KKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g--~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|..-...... .+| .+|+.++++.+.
T Consensus 72 ~G~V~~vG~~v~---------~~~vGdrV~~~~~g~~~--~~G~~aey~~v~~~~~~ 117 (343)
T 3gaz_A 72 AGTVVAVGPEVD---------SFRVGDAVFGLTGGVGG--LQGTHAQFAAVDARLLA 117 (343)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEECCSSTT--CCCSSBSEEEEEGGGEE
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEEeCCCCC--CCcceeeEEEecHHHee
Confidence 599999999753 59999999863211000 112 477777766544
No 55
>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}
Probab=89.06 E-value=0.41 Score=32.50 Aligned_cols=41 Identities=22% Similarity=0.217 Sum_probs=27.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. ..+++||+|.....++ =.+|++++++.+.
T Consensus 99 ~G~V~~vG~~v~--------~~~~vGdrV~~~~~G~------~aey~~v~~~~~~ 139 (379)
T 3iup_A 99 AGVVVEAGSSPA--------AQALMGKTVAAIGGAM------YSQYRCIPADQCL 139 (379)
T ss_dssp EEEEEEECSSHH--------HHTTTTCEEEECCSCC------SBSEEEEEGGGEE
T ss_pred EEEEEEeCCCcc--------cCCCCCCEEEecCCCc------ceeEEEeCHHHeE
Confidence 599999999741 1589999999754221 1466666665543
No 56
>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1
Probab=88.92 E-value=0.28 Score=33.02 Aligned_cols=41 Identities=32% Similarity=0.529 Sum_probs=27.8
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCC-CceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEY-GGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y-~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++.. .+++||+|..... .|. =.+|++++++.+.
T Consensus 96 ~G~V~~vG~~v~---------~~~vGdrV~~~~~~~G~-----~aey~~v~~~~~~ 137 (351)
T 1yb5_A 96 AGVIEAVGDNAS---------AFKKGDRVFTSSTISGG-----YAEYALAADHTVY 137 (351)
T ss_dssp EEEEEEECTTCT---------TCCTTCEEEESCCSSCS-----SBSEEEEEGGGEE
T ss_pred EEEEEEECCCCC---------CCCCCCEEEEeCCCCCc-----ceeEEEECHHHeE
Confidence 599999999752 5899999987532 121 1467777665543
No 57
>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A
Probab=88.62 E-value=0.37 Score=32.32 Aligned_cols=23 Identities=39% Similarity=0.632 Sum_probs=18.1
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEe
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLL 33 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~ 33 (63)
.|+|+++|++... .+++||+|.+
T Consensus 71 ~G~V~~vG~~v~~--------~~~~GdrV~~ 93 (360)
T 1piw_A 71 VGKVVKLGPKSNS--------GLKVGQRVGV 93 (360)
T ss_dssp EEEEEEECTTCCS--------SCCTTCEEEE
T ss_pred eEEEEEeCCCCCC--------CCCCCCEEEE
Confidence 5899999997520 4899999954
No 58
>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}
Probab=88.25 E-value=0.24 Score=33.05 Aligned_cols=41 Identities=22% Similarity=0.271 Sum_probs=27.6
Q ss_pred eEEEEEECCCe-eCCCCeEEeeeccCCCEEEeCC---CCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGA-RDVNGKFIPVSVKEGDTVLLPE---YGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~-~~~~G~~~p~~vk~GD~Vl~~~---y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++. . .+++||+|...- ..|. =.+|+.++++.+.
T Consensus 88 ~G~V~~vG~~v~~---------~~~vGdrV~~~~g~~~~G~-----~aey~~v~~~~~~ 132 (349)
T 3pi7_A 88 VGTIVAGGDEPYA---------KSLVGKRVAFATGLSNWGS-----WAEYAVAEAAACI 132 (349)
T ss_dssp EEEEEEECSSHHH---------HHHTTCEEEEECTTSSCCS-----SBSEEEEEGGGEE
T ss_pred EEEEEEECCCccC---------CCCCCCEEEEeccCCCCcc-----ceeeEeechHHeE
Confidence 59999999975 3 599999999642 1111 1467777666543
No 59
>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*
Probab=87.82 E-value=0.45 Score=32.03 Aligned_cols=40 Identities=25% Similarity=0.285 Sum_probs=26.3
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESI 56 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DI 56 (63)
.|+|+++|++.. ..+++||+|.....++ =.+|+.++++.+
T Consensus 92 ~G~V~~vG~~V~--------~~~~vGdrV~~~~~G~------~aey~~v~~~~~ 131 (362)
T 2c0c_A 92 IGEVVALGLSAS--------ARYTVGQAVAYMAPGS------FAEYTVVPASIA 131 (362)
T ss_dssp EEEEEEECTTGG--------GTCCTTCEEEEECSCC------SBSEEEEEGGGC
T ss_pred EEEEEEECCCcc--------CCCCCCCEEEEccCCc------ceeEEEEcHHHe
Confidence 599999999752 1489999998743211 135666655543
No 60
>3mlq_E Transcription-repair coupling factor; tudor, transferase-transcription complex; 2.91A {Thermus thermophilus}
Probab=87.79 E-value=0.56 Score=25.83 Aligned_cols=31 Identities=23% Similarity=0.400 Sum_probs=10.2
Q ss_pred eccCCCEEEeCCCC-c-----eEEEECC--EEEEEEecC
Q 045997 24 SVKEGDTVLLPEYG-G-----AEVKLGD--KKYHLYEDE 54 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~-g-----~ev~~~g--~~y~i~~e~ 54 (63)
.+++||.|+++.++ | .+++++| .+|+.++-.
T Consensus 2 ~l~~GD~VVh~~hGiG~~~gi~~~~v~g~~~ey~~l~y~ 40 (71)
T 3mlq_E 2 PHMPGDYLIHPEHGVGQYLGLETREVLGVKRDYLVLRYK 40 (71)
T ss_dssp --------------CEEEEEEEEEEETTEEEEEEEEEET
T ss_pred cCCCCCEEEECCCeeEEEeEEEEEEeCCeeEEEEEEEEC
Confidence 47999999999977 2 2456666 478877643
No 61
>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*
Probab=87.72 E-value=0.37 Score=32.28 Aligned_cols=21 Identities=33% Similarity=0.438 Sum_probs=17.8
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.| |+++|++ . .+++||+|...
T Consensus 66 ~G-V~~vG~~-~---------~~~vGdrV~~~ 86 (357)
T 2b5w_A 66 VG-VVVDPND-T---------ELEEGDIVVPT 86 (357)
T ss_dssp EE-EEEECTT-S---------SCCTTCEEEEC
T ss_pred EE-EEEECCC-C---------CCCCCCEEEEC
Confidence 58 9999997 3 49999999875
No 62
>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*
Probab=87.08 E-value=0.45 Score=32.14 Aligned_cols=23 Identities=39% Similarity=0.585 Sum_probs=19.0
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++|++.. .+++||+|...
T Consensus 71 ~G~V~~vG~~v~---------~~~~GdrV~~~ 93 (371)
T 3gqv_A 71 AGTVVAVGSDVT---------HIQVGDRVYGA 93 (371)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEEE
T ss_pred EEEEEEeCCCCC---------CCCCCCEEEEe
Confidence 599999999752 59999999753
No 63
>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}
Probab=85.65 E-value=1.1 Score=33.94 Aligned_cols=40 Identities=23% Similarity=0.297 Sum_probs=26.6
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|++||++.. .+++||+|+....++ =.+|+.++++.+.
T Consensus 273 aG~V~~vG~~V~---------~~~vGDrV~~~~~G~------~ae~~~v~~~~~~ 312 (795)
T 3slk_A 273 AGVVVETGPGVT---------GLAPGDRVMGMIPKA------FGPLAVADHRMVT 312 (795)
T ss_dssp EEEEEEECSSCC---------SSCTTCEEEECCSSC------SSSEEEEETTSEE
T ss_pred EEEEEEeCCCCC---------cCCCCCEEEEEecCC------CcCEEEeehHHEE
Confidence 599999999863 599999998643221 0256666655443
No 64
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=85.54 E-value=0.7 Score=30.45 Aligned_cols=24 Identities=38% Similarity=0.540 Sum_probs=19.9
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPE 35 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~ 35 (63)
.|+|+++|++.. .+++||+|....
T Consensus 62 ~G~V~~vG~~V~---------~~~~GdrV~~~~ 85 (346)
T 4a2c_A 62 SGYIDAVGSGVD---------DLHPGDAVACVP 85 (346)
T ss_dssp EEEEEEECTTCC---------SCCTTCEEEECC
T ss_pred EEEEEEECCCcc---------cccCCCeEEeee
Confidence 599999999864 589999998754
No 65
>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}
Probab=85.46 E-value=0.63 Score=31.02 Aligned_cols=40 Identities=25% Similarity=0.348 Sum_probs=26.4
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|+++|++. .+++||+|......|. =.+|+.++++.+.
T Consensus 87 ~G~V~~vG~~v----------~~~vGDrV~~~~~~G~-----~aey~~v~~~~~~ 126 (342)
T 4eye_A 87 AGVVRSAPEGS----------GIKPGDRVMAFNFIGG-----YAERVAVAPSNIL 126 (342)
T ss_dssp EEEEEECCTTS----------SCCTTCEEEEECSSCC-----SBSEEEECGGGEE
T ss_pred EEEEEEECCCC----------CCCCCCEEEEecCCCc-----ceEEEEEcHHHeE
Confidence 58999999863 2899999986543221 1356666665543
No 66
>3pqh_A Gene product 138; beta-helix, OB-fold, phage baseplate, iron-binding, cell MEM piercing, viral protein; 1.29A {Bacteriophage PHI92}
Probab=81.53 E-value=3 Score=25.67 Aligned_cols=34 Identities=6% Similarity=0.173 Sum_probs=25.0
Q ss_pred ceEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEE
Q 045997 2 ISGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKL 43 (63)
Q Consensus 2 ~~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~ 43 (63)
..|.|||+..+++ ++..+ +|+..+|..+ |..|.+
T Consensus 19 S~gVvIa~~d~ry------R~~gL-~GEvaiY~~~-G~~I~L 52 (127)
T 3pqh_A 19 SEKVIISNNKQTY------ASFDP-NGNISVYNTQ-GMKIDM 52 (127)
T ss_dssp -CCEEEEETTTEE------EEECT-TSCEEEEETT-SCEEEE
T ss_pred cccEEEEeCCccc------ccCCC-CCcEEEEcCC-CCEEEE
Confidence 3578888887654 55668 9999999996 666655
No 67
>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1
Probab=80.30 E-value=1.4 Score=29.80 Aligned_cols=28 Identities=29% Similarity=0.400 Sum_probs=18.9
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeC
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~ 34 (63)
.|+|+++| +..... ....+++||+|...
T Consensus 80 ~G~V~~vG-~V~~~~---~~~~~~vGdrV~~~ 107 (380)
T 1vj0_A 80 AGRVVEVN-GEKRDL---NGELLKPGDLIVWN 107 (380)
T ss_dssp EEEEEEES-SCCBCT---TSCBCCTTCEEEEC
T ss_pred EEEEEEeC-Cccccc---cCCCCCCCCEEEEc
Confidence 59999999 753100 00158999999974
No 68
>3es4_A Uncharacterized protein DUF861 with A RMLC-like C; 17741406, protein of unknown function (DUF861) with A RMLC-L fold; HET: MSE; 1.64A {Agrobacterium tumefaciens str}
Probab=79.58 E-value=3.4 Score=24.60 Aligned_cols=34 Identities=18% Similarity=0.256 Sum_probs=23.1
Q ss_pred CCCeEEeeeccCCCEEEeCC-CCceEEEECC-EEEEEE
Q 045997 16 VNGKFIPVSVKEGDTVLLPE-YGGAEVKLGD-KKYHLY 51 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~-y~g~ev~~~g-~~y~i~ 51 (63)
++|+ +..+++||.++|++ +.|+.=..+- +++.++
T Consensus 77 ddG~--~~~l~aGD~~~~P~G~~gtWev~e~vrK~~~~ 112 (116)
T 3es4_A 77 ADAD--PVKIGPGSIVSIAKGVPSRLEILSSFRKLATV 112 (116)
T ss_dssp TTCC--CEEECTTEEEEECTTCCEEEEECSCEEEEEEE
T ss_pred CCCe--EEEECCCCEEEECCCCeEEEEEeEEEeEEEEE
Confidence 3453 67999999999999 8887544342 344444
No 69
>1at0_A 17-hedgehog; developmental signaling molecule, cholesterol transfer, signaling protein; 1.90A {Drosophila melanogaster} SCOP: b.86.1.1
Probab=73.85 E-value=3.4 Score=24.96 Aligned_cols=26 Identities=27% Similarity=0.254 Sum_probs=20.2
Q ss_pred eCCCCeEEee-eccCCCEEEeCCCCce
Q 045997 14 RDVNGKFIPV-SVKEGDTVLLPEYGGA 39 (63)
Q Consensus 14 ~~~~G~~~p~-~vk~GD~Vl~~~y~g~ 39 (63)
..++|..+|+ ++++||+|+-.+..|.
T Consensus 9 ~~~~G~~k~i~eL~~GD~Vla~d~~G~ 35 (145)
T 1at0_A 9 LLESGVRKPLGELSIGDRVLSMTANGQ 35 (145)
T ss_dssp EBTTSCEEEGGGCCTTCEEEEECTTSC
T ss_pred EeCCCCEeEHHHcCCCCEEEEECCCCC
Confidence 3478888888 9999999997655554
No 70
>2ozi_A Hypothetical protein RPA4178; APC6210, putative protein RPA4178, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.15A {Rhodopseudomonas palustris CGA009} PDB: 3lag_A*
Probab=71.15 E-value=6.7 Score=22.00 Aligned_cols=39 Identities=18% Similarity=0.140 Sum_probs=26.8
Q ss_pred EEEEECCCeeC---CCCeEEeeeccCCCEEEeCCCCceEEEE
Q 045997 5 KVVAVGPGARD---VNGKFIPVSVKEGDTVLLPEYGGAEVKL 43 (63)
Q Consensus 5 ~VvAVG~G~~~---~~G~~~p~~vk~GD~Vl~~~y~g~ev~~ 43 (63)
.++.++.|... ++|+.....+++||.+.++.-..-.+.-
T Consensus 40 ~iv~v~~G~~~~~~~dG~~~~~~l~aGd~~~~p~G~~H~~~N 81 (98)
T 2ozi_A 40 VVVPMADGEMTIVAPDGTRSLAQLKTGRSYARKAGVQHDVRN 81 (98)
T ss_dssp EEEESSCBC-CEECTTSCEECCCBCTTCCEEECTTCEEEEEE
T ss_pred EEEEEeeEEEEEEeCCCcEEEEEECCCCEEEECCCCceeCEE
Confidence 35567777633 4776567799999999998765555544
No 71
>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*
Probab=70.03 E-value=3.6 Score=26.74 Aligned_cols=42 Identities=21% Similarity=0.313 Sum_probs=25.6
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCC-ceEEEECC--EEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYG-GAEVKLGD--KKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~-g~ev~~~g--~~y~i~~e~DIl 57 (63)
.|+|+++|. + .+++||+|....+. |. ..+| .+|+.++++.+.
T Consensus 66 ~G~V~~~Gv-----~------~~~vGdrV~~~~~~~g~--~~~G~~aey~~v~~~~~~ 110 (324)
T 3nx4_A 66 AGTVHASED-----P------RFHAGQEVLLTGWGVGE--NHWGGLAERARVKGDWLV 110 (324)
T ss_dssp EEEEEEESS-----T------TCCTTCEEEEECTTBTT--TBCCSSBSEEEECGGGCE
T ss_pred EEEEEEeCC-----C------CCCCCCEEEEcccccCC--CCCCceeeEEecCHHHcE
Confidence 589999984 1 59999999964311 10 0111 467766665543
No 72
>2lqk_A Transcriptional regulator; RNA polymerase interacting domain, transcription regulator; NMR {Thermus thermophilus}
Probab=71.62 E-value=1 Score=24.57 Aligned_cols=31 Identities=29% Similarity=0.524 Sum_probs=21.7
Q ss_pred eccCCCEEEeCCCCc------eEEEECC--EEEEEEecC
Q 045997 24 SVKEGDTVLLPEYGG------AEVKLGD--KKYHLYEDE 54 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g------~ev~~~g--~~y~i~~e~ 54 (63)
.+++||.|+|+.++- .+.++.| .+|++++-.
T Consensus 6 ~f~~GD~VVy~~hGvg~i~gIe~~~v~G~~~~y~~l~~~ 44 (70)
T 2lqk_A 6 EFRPGDKVVLPPYGVGVVAGIAQRSVSGVSRAYYQVDFP 44 (70)
Confidence 589999999999773 2333444 578887753
No 73
>4e2q_A Ureidoglycine aminohydrolase; BI-cupin, manganese binding, endoplasmic RET hydrolase; 2.50A {Arabidopsis thaliana} PDB: 4e2s_A
Probab=68.41 E-value=13 Score=24.85 Aligned_cols=49 Identities=20% Similarity=0.332 Sum_probs=35.7
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECC---EEEEEEec
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGD---KKYHLYED 53 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g---~~y~i~~e 53 (63)
.|.-|==|.|.+..+|+ ..+|++||.+.++.|..+.+.--| -+|++.++
T Consensus 209 h~~~vL~G~g~y~l~~~--~~~V~~GD~i~~~~~~~h~~~n~G~e~~~yl~ykd 260 (266)
T 4e2q_A 209 HGLLLLEGQGIYRLGDN--WYPVQAGDVIWMAPFVPQWYAALGKTRSRYLLYKD 260 (266)
T ss_dssp EEEEEEECEEEEEETTE--EEEEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred eEEEEEeceEEEEECCE--EEEecCCCEEEECCCCcEEEEeCCCCCEEEEEEcc
Confidence 34444557777666664 468999999999999999997633 47777764
No 74
>2z1c_A Hydrogenase expression/formation protein HYPC; [NIFE] hydrogenase maturation, OB-fold, chaperone, metal BIN protein; HET: PG4; 1.80A {Thermococcus kodakarensis} SCOP: b.40.14.1
Probab=64.91 E-value=7.7 Score=21.54 Aligned_cols=32 Identities=34% Similarity=0.424 Sum_probs=19.5
Q ss_pred eEEEEEECCC--eeCCCCeEEee------eccCCCEEEeC
Q 045997 3 SGKVVAVGPG--ARDVNGKFIPV------SVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G--~~~~~G~~~p~------~vk~GD~Vl~~ 34 (63)
-|+|+++... ..+-.|.+... ++++||.|+.-
T Consensus 6 P~kVvei~~~~A~vd~~Gv~r~V~l~Lv~~~~vGD~VLVH 45 (75)
T 2z1c_A 6 PGKVIEVNGPVAVVDFGGVKREVRLDLMPDTKPGDWVIVH 45 (75)
T ss_dssp CEEEEEEETTEEEEEETTEEEEEECTTSTTCCTTCEEEEE
T ss_pred cEEEEEECCCEEEEEcCCEEEEEEEEEeCCCCCCCEEEEe
Confidence 3788888332 22235555433 47899999863
No 75
>1sfn_A Conserved hypothetical protein; structural genomics, nysgxrc target T1583, PSI, protein STRU initiative; 2.46A {Deinococcus radiodurans} SCOP: b.82.1.11
Probab=63.11 E-value=21 Score=22.74 Aligned_cols=45 Identities=22% Similarity=0.277 Sum_probs=31.1
Q ss_pred EEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEEC---CEEEEEEec
Q 045997 7 VAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLG---DKKYHLYED 53 (63)
Q Consensus 7 vAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~---g~~y~i~~e 53 (63)
+-=|.+....+|+. ..|++||.+.|+.+....+.-. .-.|+++++
T Consensus 192 vLeG~~~~~~~~~~--~~l~~GD~~~~~~~~pH~~~n~g~~~~~yl~~kd 239 (246)
T 1sfn_A 192 MLEGEGLYKLEENY--YPVTAGDIIWMGAHCPQWYGALGRNWSKYLLYKD 239 (246)
T ss_dssp EEECEEEEEETTEE--EEEETTCEEEECTTCCEEEEEESSSCEEEEEEEE
T ss_pred EEECEEEEEECCEE--EEcCCCCEEEECCCCCEEEEcCCCCCEEEEEEEe
Confidence 33455554445544 4899999999999998887652 346777764
No 76
>2qnk_A 3-hydroxyanthranilate 3,4-dioxygenase; bicupin fold, cupin barrel, extradiol dioxygenase, metalloen trytophan catabolism, NAD+ synthesis; HET: MSE; 1.60A {Homo sapiens} PDB: 3fe5_A
Probab=58.70 E-value=22 Score=24.51 Aligned_cols=49 Identities=22% Similarity=0.334 Sum_probs=29.8
Q ss_pred EEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEEEEe
Q 045997 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESILGTL 60 (63)
Q Consensus 4 G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIla~i 60 (63)
-.|++-|+|.... ..... |+-++---+...|++++++|. ++.+|.|.+-
T Consensus 209 teV~l~G~Ges~~------~~~~~-d~wiWqLEGss~Vt~~~q~~~-L~~~DsLLIp 257 (286)
T 2qnk_A 209 TQVIAYGQGSSEG------LRQNV-DVWLWQLEGSSVVTMGGRRLS-LAPDDSLLVL 257 (286)
T ss_dssp EEEEEECSEEEEE------CCCSS-CEEEEEEESCEEEEETTEEEE-ECTTEEEEEC
T ss_pred eEEEEEcCCcccc------ccCcC-cEEEEEEcCceEEEECCeEEe-ccCCCEEEec
Confidence 3677788886421 12222 666654444456788888877 6666766653
No 77
>3bu7_A Gentisate 1,2-dioxygenase; cupin domain, oxidoreductase, plasmid; 2.80A {Silicibacter pomeroyi} SCOP: b.82.1.23
Probab=58.10 E-value=20 Score=25.23 Aligned_cols=43 Identities=23% Similarity=0.226 Sum_probs=28.6
Q ss_pred CCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECC--EEEEEEecC
Q 045997 10 GPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGD--KKYHLYEDE 54 (63)
Q Consensus 10 G~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g--~~y~i~~e~ 54 (63)
|.|...-+|+ ...+++||.++.+.+.--.+.-.+ +...++.-.
T Consensus 323 G~G~~~V~ge--~~~~~~GD~~~iP~g~~H~~~N~g~~e~~~ll~i~ 367 (394)
T 3bu7_A 323 GQGYSIVGGK--RFDWSEHDIFCVPAWTWHEHCNTQERDDACLFSFN 367 (394)
T ss_dssp CCEEEEETTE--EEEECTTCEEEECTTCCEEEEECCSSCCEEEEEEE
T ss_pred CeEEEEECCE--EEEEeCCCEEEECCCCeEEeEeCCCCCCeEEEEee
Confidence 6665544553 468999999999998777776543 444444433
No 78
>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*
Probab=57.00 E-value=5.8 Score=26.00 Aligned_cols=22 Identities=27% Similarity=0.351 Sum_probs=16.5
Q ss_pred eEEEEE--ECCCeeCCCCeEEeeeccCCCEEEe
Q 045997 3 SGKVVA--VGPGARDVNGKFIPVSVKEGDTVLL 33 (63)
Q Consensus 3 ~G~VvA--VG~G~~~~~G~~~p~~vk~GD~Vl~ 33 (63)
.|.+++ ||++. ..+++||+|..
T Consensus 79 ~G~~~~GvV~~~v---------~~~~vGdrV~~ 102 (345)
T 2j3h_A 79 QGYGVSRIIESGH---------PDYKKGDLLWG 102 (345)
T ss_dssp EEEEEEEEEEECS---------TTCCTTCEEEE
T ss_pred ecceEEEEEecCC---------CCCCCCCEEEe
Confidence 478888 88643 15899999985
No 79
>3v2d_V 50S ribosomal protein L21; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_P 2hgj_U 2hgq_U 2hgu_U 1vsa_P 2j03_V 2jl6_V 2jl8_V 2v47_V 2v49_V 2wdi_V 2wdj_V 2wdl_V 2wdn_V 2wh2_V 2wh4_V 2wrj_V 2wrl_V 2wro_V 2wrr_V ...
Probab=56.41 E-value=27 Score=20.29 Aligned_cols=30 Identities=27% Similarity=0.289 Sum_probs=22.2
Q ss_pred eeccCCCEEEeCCC---CceEEEECCEEEEEEecCC
Q 045997 23 VSVKEGDTVLLPEY---GGAEVKLGDKKYHLYEDES 55 (63)
Q Consensus 23 ~~vk~GD~Vl~~~y---~g~ev~~~g~~y~i~~e~D 55 (63)
.-|++||.+...+. .|.+|.++ .+++..++
T Consensus 12 ykV~~Gd~i~vekl~~~~G~~v~~~---VLlv~~~~ 44 (101)
T 3v2d_V 12 YRVEPGLKLRVEKLDAEPGATVELP---VLLLGGEK 44 (101)
T ss_dssp EEECTTCEEEESCCSCCTTCEEEEC---EEEEESSS
T ss_pred EEEeCCCEEEECCcCCCCCCEEEEE---EEEECCCc
Confidence 57999999998875 37889888 45555554
No 80
>3d3r_A Hydrogenase assembly chaperone HYPC/HUPF; small beta-barrel, structural genomics, PSI-2, protein struc initiative; 1.85A {Shewanella oneidensis} SCOP: b.40.14.1
Probab=54.85 E-value=11 Score=22.32 Aligned_cols=32 Identities=31% Similarity=0.301 Sum_probs=19.0
Q ss_pred eEEEEEECCC----eeCCCCeEE-------eeeccCCCEEEeC
Q 045997 3 SGKVVAVGPG----ARDVNGKFI-------PVSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G----~~~~~G~~~-------p~~vk~GD~Vl~~ 34 (63)
-|+|+++.++ ..+-.|.+. |-++++||.|+.-
T Consensus 27 P~kVveI~~~~~~A~Vd~~Gv~reV~l~Lv~e~~~vGDyVLVH 69 (103)
T 3d3r_A 27 PSQVVAVDNERQSVTVDTLGVRRDVSSHLMTEPLAIGDYVLIH 69 (103)
T ss_dssp CEEEEEEETTTTEEEEEETTEEEEEECTTBSSCCCTTCEEEEE
T ss_pred CEEEEEEeCCCCEEEEEcCCEEEEEEEEeecCCCCCCCEEEEe
Confidence 3788888421 222345543 2247889999863
No 81
>2d40_A Z3393, putative gentisate 1,2-dioxygenase; gentisic acid, bicupin, tetramer, montreal- bacterial structural genomics initiative, BSGI; 2.41A {Escherichia coli} SCOP: b.82.1.23
Probab=53.28 E-value=18 Score=24.66 Aligned_cols=43 Identities=16% Similarity=0.305 Sum_probs=28.8
Q ss_pred CCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCC
Q 045997 10 GPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDES 55 (63)
Q Consensus 10 G~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~D 55 (63)
|.|+..-+| ....+++||.++.+.+....+.. +++..++.-.|
T Consensus 297 G~g~~~v~~--~~~~~~~GD~~~vP~~~~H~~~n-~e~~~l~~~~d 339 (354)
T 2d40_A 297 GSGQVIIGN--ETFSFSAKDIFVVPTWHGVSFQT-TQDSVLFSFSD 339 (354)
T ss_dssp EEEEEEETT--EEEEEETTCEEEECTTCCEEEEE-EEEEEEEEEES
T ss_pred CeEEEEECC--EEEEEcCCCEEEECCCCeEEEEe-CCCEEEEEEcC
Confidence 555443344 34789999999999998877764 35555555433
No 82
>2cu3_A Unknown function protein; thermus thermophilus HB8, structural genomics, riken structu genomics/proteomics initiative, RSGI, NPPSFA; 1.70A {Thermus thermophilus} SCOP: d.15.3.2 PDB: 2htm_E
Probab=52.79 E-value=11 Score=19.43 Aligned_cols=19 Identities=21% Similarity=0.319 Sum_probs=13.7
Q ss_pred CCeEEe------eeccCCCEEEeCC
Q 045997 17 NGKFIP------VSVKEGDTVLLPE 35 (63)
Q Consensus 17 ~G~~~p------~~vk~GD~Vl~~~ 35 (63)
||+++| ..++.||+|-+-+
T Consensus 35 N~~~v~~~~~~~~~L~dgD~v~i~~ 59 (64)
T 2cu3_A 35 NEEAFLGLEVPDRPLRDGDVVEVVA 59 (64)
T ss_dssp TTEEEEGGGCCCCCCCTTCEEEEEE
T ss_pred CCEECCccccCCcCCCCCCEEEEEe
Confidence 566666 4699999987644
No 83
>1wv3_A Similar to DNA segregation ATPase and related proteins; structural genomics, unknown function; 1.75A {Staphylococcus aureus subsp} SCOP: b.26.1.4 b.26.1.4
Probab=51.60 E-value=28 Score=22.56 Aligned_cols=37 Identities=11% Similarity=0.218 Sum_probs=27.0
Q ss_pred CCCeEE--eeecc-CCCEEEeCCCCceEEEECCEEEEEEecCC
Q 045997 16 VNGKFI--PVSVK-EGDTVLLPEYGGAEVKLGDKKYHLYEDES 55 (63)
Q Consensus 16 ~~G~~~--p~~vk-~GD~Vl~~~y~g~ev~~~g~~y~i~~e~D 55 (63)
-||+++ +..++ +||.+.+ ++..+++..++..++...+
T Consensus 139 vNg~~i~~~~~L~~~GD~I~i---g~~~~~~~~~~l~i~~~~~ 178 (238)
T 1wv3_A 139 INYELQEQLTNKAYIGDHIYV---EGIWLEVQADGLNVLSQNT 178 (238)
T ss_dssp ETTEECCSSEEEEETTCEEEE---TTEEEEECSSEEEEECSSC
T ss_pred ECCEEeccceeccCCcCEEEE---CCEEEEEECCEEEEEeccc
Confidence 355442 45799 9999998 6678888888887775554
No 84
>2opk_A Hypothetical protein; putative mannose-6-phosphate isomerase, structural genomics, center for structural genomics, JCSG; 2.10A {Ralstonia eutropha}
Probab=51.04 E-value=8.7 Score=21.58 Aligned_cols=21 Identities=19% Similarity=0.234 Sum_probs=16.6
Q ss_pred eeccCCCEEEeCCCCceEEEE
Q 045997 23 VSVKEGDTVLLPEYGGAEVKL 43 (63)
Q Consensus 23 ~~vk~GD~Vl~~~y~g~ev~~ 43 (63)
..+++||.++|+....-.+..
T Consensus 75 ~~l~~Gd~i~ipa~~~H~~~n 95 (112)
T 2opk_A 75 RVMRPGDWLHVPAHCRHRVAW 95 (112)
T ss_dssp EEECTTEEEEECTTCCEEEEE
T ss_pred EEECCCCEEEECCCCcEEEEe
Confidence 689999999999876655544
No 85
>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*
Probab=50.80 E-value=11 Score=24.54 Aligned_cols=42 Identities=24% Similarity=0.419 Sum_probs=24.0
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCC-ceEEEECC--EEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYG-GAEVKLGD--KKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~-g~ev~~~g--~~y~i~~e~DIl 57 (63)
.|+|+++|. ..+++||+|....+. |. ..+| .+|+.++++.+.
T Consensus 70 ~G~V~~~~v-----------~~~~vGdrV~~~~~~~g~--~~~G~~aey~~v~~~~~~ 114 (330)
T 1tt7_A 70 AGTVVSSND-----------PRFAEGDEVIATSYELGV--SRDGGLSEYASVPGDWLV 114 (330)
T ss_dssp EEEEEECSS-----------TTCCTTCEEEEESTTBTT--TBCCSSBSSEEECGGGEE
T ss_pred EEEEEEcCC-----------CCCCCCCEEEEcccccCC--CCCccceeEEEecHHHeE
Confidence 588888653 158999999864321 10 0112 366666665543
No 86
>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1
Probab=48.85 E-value=13 Score=24.16 Aligned_cols=41 Identities=27% Similarity=0.355 Sum_probs=23.9
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCC-CceEEEECC--EEEEEEecCCE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEY-GGAEVKLGD--KKYHLYEDESI 56 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y-~g~ev~~~g--~~y~i~~e~DI 56 (63)
.|+|+++|. ..+++||+|....+ -|. ..+| .+|++++++.+
T Consensus 69 ~G~V~~~~v-----------~~~~vGdrV~~~~~~~g~--~~~G~~aey~~v~~~~~ 112 (328)
T 1xa0_A 69 AGVVVSSQH-----------PRFREGDEVIATGYEIGV--THFGGYSEYARLHGEWL 112 (328)
T ss_dssp EEEEEECCS-----------SSCCTTCEEEEESTTBTT--TBCCSSBSEEEECGGGC
T ss_pred EEEEEecCC-----------CCCCCCCEEEEccccCCC--CCCccceeEEEechHHe
Confidence 478888643 15899999986432 111 0112 46777766554
No 87
>1ypr_A Profilin; actin-binding protein, cytoskeleton; 2.30A {Saccharomyces cerevisiae} SCOP: d.110.1.1 PDB: 1k0k_A
Probab=48.63 E-value=14 Score=21.74 Aligned_cols=17 Identities=12% Similarity=0.374 Sum_probs=14.3
Q ss_pred eEEEECCEEEEEEecCC
Q 045997 39 AEVKLGDKKYHLYEDES 55 (63)
Q Consensus 39 ~ev~~~g~~y~i~~e~D 55 (63)
+=+.++|++|+++|.+|
T Consensus 58 ~Gl~l~G~KY~~i~~d~ 74 (125)
T 1ypr_A 58 NGLHIQGQKFMLLRADD 74 (125)
T ss_dssp HCEEETTEEEEEEEECS
T ss_pred CCeEECCEEEEEEecCC
Confidence 34899999999999665
No 88
>3d9y_A Profilin; yeast, actin-binding, cytoskeleton, protein; 1.65A {Schizosaccharomyces pombe} SCOP: d.110.1.0 PDB: 3dav_A
Probab=48.41 E-value=14 Score=21.69 Aligned_cols=17 Identities=24% Similarity=0.350 Sum_probs=14.7
Q ss_pred eEEEECCEEEEEEecCC
Q 045997 39 AEVKLGDKKYHLYEDES 55 (63)
Q Consensus 39 ~ev~~~g~~y~i~~e~D 55 (63)
+=+.++|++|+++|.+|
T Consensus 60 ~Gl~l~G~Ky~vir~d~ 76 (127)
T 3d9y_A 60 TGIILAGQKYITIRAEG 76 (127)
T ss_dssp HCEEETTEEEEEEEECS
T ss_pred CCEEEcCeEEEEEEeCc
Confidence 45999999999999865
No 89
>1sq4_A GLXB, glyoxylate-induced protein; structural genomics, double beta barrel protein, PSI, protei structure initiative; 2.70A {Pseudomonas aeruginosa} SCOP: b.82.1.11
Probab=47.41 E-value=49 Score=21.58 Aligned_cols=47 Identities=28% Similarity=0.415 Sum_probs=32.8
Q ss_pred EEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECC---EEEEEEec
Q 045997 5 KVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGD---KKYHLYED 53 (63)
Q Consensus 5 ~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g---~~y~i~~e 53 (63)
..+==|.|....+|+. ..|++||.+.++.+....+.-.| -+|+++++
T Consensus 216 ~~il~G~~~~~~~~~~--~~v~~GD~~~~~~~~~h~~~n~g~~~~~yl~~~d 265 (278)
T 1sq4_A 216 LYVLEGKAVYRLNQDW--VEVEAGDFMWLRAFCPQACYSGGPGRFRYLLYKD 265 (278)
T ss_dssp EEEEECEEEEEETTEE--EEEETTCEEEEEESCCEEEECCSSSCEEEEEEEE
T ss_pred EEEEeCEEEEEECCEE--EEeCCCCEEEECCCCCEEEEcCCCCCEEEEEEEE
Confidence 3344466665555543 68999999999999998887632 37777763
No 90
>3bcw_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 1.60A {Bordetella bronchiseptica RB50}
Probab=45.95 E-value=36 Score=19.70 Aligned_cols=16 Identities=38% Similarity=0.515 Sum_probs=13.6
Q ss_pred eeeccCCCEEEeCCCC
Q 045997 22 PVSVKEGDTVLLPEYG 37 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~ 37 (63)
+..+++||.++|+.-.
T Consensus 88 ~~~l~~GD~~~ip~g~ 103 (123)
T 3bcw_A 88 VHAVKAGDAFIMPEGY 103 (123)
T ss_dssp EEEEETTCEEEECTTC
T ss_pred EEEECCCCEEEECCCC
Confidence 4689999999999844
No 91
>3myx_A Uncharacterized protein pspto_0244; protein of unknown function (DUF861), cupin_3 (PF05899), STR genomics; HET: MSE; 1.30A {Pseudomonas syringae PV}
Probab=45.88 E-value=16 Score=24.14 Aligned_cols=34 Identities=26% Similarity=0.374 Sum_probs=22.4
Q ss_pred CCCeEEeeeccCCCEEEeCC-CCceEEEECC-EEEEEE
Q 045997 16 VNGKFIPVSVKEGDTVLLPE-YGGAEVKLGD-KKYHLY 51 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~-y~g~ev~~~g-~~y~i~ 51 (63)
++|+ +..+++||.++|++ +.++.=..+- ++++++
T Consensus 202 ~~G~--~~~~~aGD~~~~P~G~~~tWev~e~vrK~Yvi 237 (238)
T 3myx_A 202 ENGS--SLTVNTGDTVFVAQGAPCKWTSTGYVRKFYAV 237 (238)
T ss_dssp TTSC--EEEECTTCEEEECTTCEEEEEESSCEEEEEEE
T ss_pred CCCC--EEEECCCCEEEECCCCEEEEEECccEEEEEEe
Confidence 4554 57899999999999 6666433332 455443
No 92
>1acf_A Profilin I; protein binding, actin-binding protein, contractIle protein; 2.00A {Acanthamoeba castellanii} SCOP: d.110.1.1 PDB: 1prq_A 2prf_A 1f2k_A 2acg_A
Probab=45.73 E-value=17 Score=21.30 Aligned_cols=17 Identities=12% Similarity=0.229 Sum_probs=14.2
Q ss_pred eEEEECCEEEEEEecCC
Q 045997 39 AEVKLGDKKYHLYEDES 55 (63)
Q Consensus 39 ~ev~~~g~~y~i~~e~D 55 (63)
+=+.++|++|+++|.+|
T Consensus 58 ~Gi~l~G~KY~~i~~d~ 74 (125)
T 1acf_A 58 GGFDLAGVHYVTLRADD 74 (125)
T ss_dssp HCEEETTEEEEEEEESS
T ss_pred CCeEECCEEEEEEEecC
Confidence 34899999999999665
No 93
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=44.60 E-value=28 Score=22.62 Aligned_cols=36 Identities=22% Similarity=0.197 Sum_probs=22.5
Q ss_pred eEEEEEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCCEE
Q 045997 3 SGKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESIL 57 (63)
Q Consensus 3 ~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DIl 57 (63)
.|+|++.|- ..+++||+|+..-- =.+|++++++.+.
T Consensus 79 ~G~V~~~~v-----------~~~~vGdrV~~~G~--------~aey~~v~~~~~~ 114 (336)
T 4b7c_A 79 VGKVLVSKH-----------PGFQAGDYVNGALG--------VQDYFIGEPKGFY 114 (336)
T ss_dssp EEEEEEECS-----------TTCCTTCEEEEECC--------SBSEEEECCTTCE
T ss_pred EEEEEecCC-----------CCCCCCCEEeccCC--------ceEEEEechHHeE
Confidence 578888541 15899999986321 1466666665543
No 94
>1rc6_A Hypothetical protein YLBA; structural genomics, NYSGXRC, SGX clone NAME 3174C1TCT3B1, T T1521, PSI, protein initiative; 2.60A {Escherichia coli} SCOP: b.82.1.11
Probab=43.59 E-value=35 Score=21.73 Aligned_cols=31 Identities=19% Similarity=0.220 Sum_probs=20.9
Q ss_pred eeeccCCCEEEeCCCCceEEEECCE----EEEEEe
Q 045997 22 PVSVKEGDTVLLPEYGGAEVKLGDK----KYHLYE 52 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~g~ev~~~g~----~y~i~~ 52 (63)
...+++||.+.|+...-..+.-.+. .|++++
T Consensus 219 ~~~l~~GD~i~~~~~~~H~~~n~g~~~~~~~l~~~ 253 (261)
T 1rc6_A 219 WIPVKKGDYIFMGAYSLQAGYGVGRGEAFSYIYSK 253 (261)
T ss_dssp EEEEETTCEEEECSSEEEEEEEC----CEEEEEEE
T ss_pred EEEeCCCCEEEECCCCcEEeEeCCCCcCEEEEEEe
Confidence 4589999999999877666655332 455544
No 95
>3lwc_A Uncharacterized protein; structural genomics, unknown function, joint center for STRU genomics, JCSG, protein structure initiative; HET: MSE; 1.40A {Rhizobium leguminosarum}
Probab=43.47 E-value=44 Score=18.98 Aligned_cols=21 Identities=19% Similarity=0.431 Sum_probs=15.2
Q ss_pred eeeccCCCEEEeCCCCceEEE
Q 045997 22 PVSVKEGDTVLLPEYGGAEVK 42 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~g~ev~ 42 (63)
...+++||.+.++.-.-..+.
T Consensus 78 ~~~l~~GD~v~ip~g~~H~~~ 98 (119)
T 3lwc_A 78 TVTAGPGEIVYMPKGETVTIR 98 (119)
T ss_dssp EEEECTTCEEEECTTCEEEEE
T ss_pred EEEECCCCEEEECCCCEEEEE
Confidence 457999999999886544443
No 96
>2do3_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.34.5.5
Probab=42.59 E-value=38 Score=18.53 Aligned_cols=30 Identities=27% Similarity=0.416 Sum_probs=20.0
Q ss_pred eccCCCEEEe--CCCC---ceEEEECCEEEEEEec
Q 045997 24 SVKEGDTVLL--PEYG---GAEVKLGDKKYHLYED 53 (63)
Q Consensus 24 ~vk~GD~Vl~--~~y~---g~ev~~~g~~y~i~~e 53 (63)
.+++||+|.. .+|. |.-+++++....++++
T Consensus 17 ~F~~GDHVkVi~G~~~getGlVV~v~~d~v~v~SD 51 (69)
T 2do3_A 17 YFKMGDHVKVIAGRFEGDTGLIVRVEENFVILFSD 51 (69)
T ss_dssp SCCTTCEEEESSSTTTTCEEEEEEECSSCEEEEES
T ss_pred eccCCCeEEEeccEEcCceEEEEEEeCCEEEEEeC
Confidence 6889999877 3466 4566777665555543
No 97
>1iz6_A Initiation factor 5A; SH3-like barrel, OB fold, biosynthetic protein; 2.00A {Pyrococcus horikoshii} SCOP: b.34.5.2 b.40.4.5
Probab=42.07 E-value=55 Score=19.64 Aligned_cols=39 Identities=13% Similarity=0.190 Sum_probs=30.9
Q ss_pred CCCeEEeeeccCCCEEEeCCCCceEEEE---CCEEEEEEecC
Q 045997 16 VNGKFIPVSVKEGDTVLLPEYGGAEVKL---GDKKYHLYEDE 54 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~y~g~ev~~---~g~~y~i~~e~ 54 (63)
.+|.......+.||++--+...-.+.++ ||..|.||..+
T Consensus 51 ~tG~~~e~tf~s~~~ve~~~ve~~~~qylY~dg~~~~fMD~e 92 (138)
T 1iz6_A 51 FDGKVRSIVKPTSAEVDVPIIDKKTAQVIAITPDTVQIMDME 92 (138)
T ss_dssp TTCCEEEEEEETTSEEEEECCEEEEEEEEEECSSEEEEECTT
T ss_pred CCCCEEEEEecCCCEEeeceEEEEEEEEEEeCCCEEEEEeCC
Confidence 5788888899999999888776665543 78888988766
No 98
>2q5w_D Molybdopterin converting factor, subunit 1; MOCO, MPT synthase, MOAD, MOAE, transferase, molybdenum cofactor biosynthesis; 2.00A {Staphylococcus aureus} PDB: 2qie_B*
Probab=41.85 E-value=23 Score=18.40 Aligned_cols=10 Identities=40% Similarity=0.504 Sum_probs=7.5
Q ss_pred eccCCCEEEe
Q 045997 24 SVKEGDTVLL 33 (63)
Q Consensus 24 ~vk~GD~Vl~ 33 (63)
.++.||+|-+
T Consensus 61 ~L~~gD~V~i 70 (77)
T 2q5w_D 61 FIQPNDTVAL 70 (77)
T ss_dssp EECTTCEEEE
T ss_pred CcCCCCEEEE
Confidence 6888888765
No 99
>1ksk_A Ribosomal small subunit pseudouridine synthase A; RSUA, lyase; 2.00A {Escherichia coli} SCOP: d.265.1.3 d.66.1.5 PDB: 1ksl_A 1ksv_A*
Probab=41.63 E-value=16 Score=23.23 Aligned_cols=25 Identities=12% Similarity=0.238 Sum_probs=15.2
Q ss_pred eccCCCEEEeCCCCceEEEEC-CEEEEEE
Q 045997 24 SVKEGDTVLLPEYGGAEVKLG-DKKYHLY 51 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g~ev~~~-g~~y~i~ 51 (63)
.|++||.|.+. +..+.++ ++.|+++
T Consensus 43 ~v~~gD~I~v~---~~~i~~e~d~~~lvv 68 (234)
T 1ksk_A 43 KLLPEHDVAYD---GNPLAQQHGPRYFML 68 (234)
T ss_dssp EECTTCCEEET---TEEECCCCCCCEEEE
T ss_pred CCCCCCEEEEe---CeEeecCCCCEEEEE
Confidence 68889988875 3445444 4444443
No 100
>3iuw_A Activating signal cointegrator; NP_814290.1, structural GENO joint center for structural genomics, JCSG, protein structu initiative; HET: MSE; 1.58A {Enterococcus faecalis V583}
Probab=41.39 E-value=10 Score=21.51 Aligned_cols=13 Identities=38% Similarity=0.790 Sum_probs=11.5
Q ss_pred eccCCCEEEeCCC
Q 045997 24 SVKEGDTVLLPEY 36 (63)
Q Consensus 24 ~vk~GD~Vl~~~y 36 (63)
.+++||.+.|.+|
T Consensus 37 ~~~vGD~l~l~E~ 49 (83)
T 3iuw_A 37 NFQVGDILILEEY 49 (83)
T ss_dssp CCCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEc
Confidence 5999999999776
No 101
>1vio_A Ribosomal small subunit pseudouridine synthase A; structural genomics, lyase; 1.59A {Haemophilus influenzae} SCOP: d.265.1.3 d.66.1.5
Probab=40.70 E-value=11 Score=24.19 Aligned_cols=25 Identities=8% Similarity=0.279 Sum_probs=15.8
Q ss_pred eccCCCEEEeCCCCceEEEECCEE-EEEE
Q 045997 24 SVKEGDTVLLPEYGGAEVKLGDKK-YHLY 51 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g~ev~~~g~~-y~i~ 51 (63)
.|++||.|.+. +..|.++++. |+++
T Consensus 42 ~v~~gD~I~v~---~~~i~~ed~~~~lvv 67 (243)
T 1vio_A 42 QISQEDEIYFE---DELLTWIEEGQYFML 67 (243)
T ss_dssp EECTTSCEEET---TEECCSSCCCCEEEE
T ss_pred CcCCCCEEEEe---ccccccCCCCEEEEE
Confidence 68889988775 3455555555 5444
No 102
>3nw4_A Gentisate 1,2-dioxygenase; beta-barrel, oxidoreductase; HET: GTQ; 2.00A {Pseudaminobacter salicylatoxidans} PDB: 3nvc_A* 3nst_A* 3njz_A* 2phd_A* 3nkt_A* 3nl1_A* 4fag_A* 4fbf_A 4fah_A
Probab=40.44 E-value=44 Score=23.35 Aligned_cols=46 Identities=22% Similarity=0.434 Sum_probs=30.6
Q ss_pred EEECCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEEecCC
Q 045997 7 VAVGPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLYEDES 55 (63)
Q Consensus 7 vAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~D 55 (63)
|.=|.|...-+|+ ...+++||.+..+.+.-..+..++ +..+++-+|
T Consensus 305 V~eG~G~~~I~~~--~~~w~~gD~fvvP~w~~h~~~n~~-~a~Lf~~~D 350 (368)
T 3nw4_A 305 VFEGAGAVVMNGE--TTKLEKGDMFVVPSWVPWSLQAET-QFDLFRFSD 350 (368)
T ss_dssp EEESCEEEEETTE--EEEECTTCEEEECTTCCEEEEESS-SEEEEEEES
T ss_pred EEeCcEEEEECCE--EEEecCCCEEEECCCCcEEEEeCC-CEEEEEEeC
Confidence 4456776554553 468999999999999877776553 344444433
No 103
>1gpp_A Endonuclease PI-SCEI; homing, protein splicing; 1.35A {Saccharomyces cerevisiae} SCOP: b.86.1.2
Probab=39.81 E-value=36 Score=22.89 Aligned_cols=32 Identities=19% Similarity=0.264 Sum_probs=23.5
Q ss_pred CCCeeCCCCeEEee-eccCCCEEEeCCCCceEE
Q 045997 10 GPGARDVNGKFIPV-SVKEGDTVLLPEYGGAEV 41 (63)
Q Consensus 10 G~G~~~~~G~~~p~-~vk~GD~Vl~~~y~g~ev 41 (63)
|+-....+|...++ +|++||.|+=++-...+|
T Consensus 15 GT~VLMADGS~K~IEdI~vGD~Vmg~DG~pR~V 47 (237)
T 1gpp_A 15 GTNVLMADGSIECIENIEVGNKVMGKDGRPREV 47 (237)
T ss_dssp TCEEEBTTSCEEEGGGCCTTCEEEBTTSSEEEE
T ss_pred CCEEEEeCCCcceeeecccCCEEecCCCCcceE
Confidence 44445578888888 999999999776554444
No 104
>4h7l_A Uncharacterized protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, cupin, unknown function; 2.45A {Planctomyces limnophilus}
Probab=39.79 E-value=66 Score=19.89 Aligned_cols=39 Identities=10% Similarity=0.169 Sum_probs=26.6
Q ss_pred CCCeeCCCCeEEeeeccCCCEEEeCCCCceEEEECCEEEEEE
Q 045997 10 GPGARDVNGKFIPVSVKEGDTVLLPEYGGAEVKLGDKKYHLY 51 (63)
Q Consensus 10 G~G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~ 51 (63)
|.+...-+|+ ...+++||.++++.-.--.+. +.-+++.+
T Consensus 77 G~g~v~idge--~~~l~~GD~v~IPpg~~H~i~-g~l~~L~I 115 (157)
T 4h7l_A 77 AHATIELNGQ--SYPLTKLLAISIPPLVRHRIV-GEATIINI 115 (157)
T ss_dssp TTCEEEETTE--EEECCTTEEEEECTTCCEEEE-SCEEEEEE
T ss_pred cEEEEEECCE--EEEeCCCCEEEECCCCeEeeE-CCEEEEEE
Confidence 6666555564 468999999999987665554 44555554
No 105
>3po0_A Small archaeal modifier protein 1; ubiquitin-like protein, protein binding; 1.55A {Haloferax volcanii} PDB: 2l83_A
Probab=37.99 E-value=22 Score=19.09 Aligned_cols=15 Identities=33% Similarity=0.656 Sum_probs=10.4
Q ss_pred eccCCCEEEe-CCCCc
Q 045997 24 SVKEGDTVLL-PEYGG 38 (63)
Q Consensus 24 ~vk~GD~Vl~-~~y~g 38 (63)
.++.||.|-| +..+|
T Consensus 73 ~l~~gDeV~i~Ppv~G 88 (89)
T 3po0_A 73 ATAAGDELALFPPVSG 88 (89)
T ss_dssp BCCTTCEEEEECCCSC
T ss_pred ccCCCCEEEEECCCCC
Confidence 6888888865 44554
No 106
>1qjo_A Dihydrolipoamide acetyltransferase; lipoyl domain, pyruvate dehydrogenase; NMR {Escherichia coli} SCOP: b.84.1.1
Probab=37.95 E-value=16 Score=19.04 Aligned_cols=15 Identities=40% Similarity=0.430 Sum_probs=9.4
Q ss_pred CCeEEeeeccCCCEE
Q 045997 17 NGKFIPVSVKEGDTV 31 (63)
Q Consensus 17 ~G~~~p~~vk~GD~V 31 (63)
.|......+++||+|
T Consensus 14 ~G~v~~~~v~~G~~V 28 (80)
T 1qjo_A 14 EVEVTEVMVKVGDKV 28 (80)
T ss_dssp CEEEEECCCCTTCEE
T ss_pred CEEEEEEEcCCCCEE
Confidence 555666666666655
No 107
>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*
Probab=37.92 E-value=17 Score=23.92 Aligned_cols=26 Identities=15% Similarity=0.064 Sum_probs=16.4
Q ss_pred eccCCCEEEeCCCCceEEEECCEEEEEEecCCE
Q 045997 24 SVKEGDTVLLPEYGGAEVKLGDKKYHLYEDESI 56 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g~ev~~~g~~y~i~~e~DI 56 (63)
.+++||+|.... | .=.+|++++++.+
T Consensus 95 ~~~vGdrV~~~~--G-----~~aey~~v~~~~~ 120 (357)
T 2zb4_A 95 NLTKGDFVTSFY--W-----PWQTKVILDGNSL 120 (357)
T ss_dssp TCCTTCEEEEEE--E-----ESBSEEEEEGGGC
T ss_pred CCCCCCEEEecC--C-----CcEEEEEEchHHc
Confidence 589999998642 1 1146666666544
No 108
>1bkb_A Translation initiation factor 5A; 1.75A {Pyrobaculum aerophilum} SCOP: b.34.5.2 b.40.4.5
Probab=37.77 E-value=64 Score=19.18 Aligned_cols=39 Identities=13% Similarity=0.136 Sum_probs=31.6
Q ss_pred CCCeEEeeeccCCCEEEeCCCCceEEEE---CCEEEEEEecC
Q 045997 16 VNGKFIPVSVKEGDTVLLPEYGGAEVKL---GDKKYHLYEDE 54 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~y~g~ev~~---~g~~y~i~~e~ 54 (63)
.+|.......+.||++--+...-.+.++ ||..|.||..+
T Consensus 53 ~tG~~~e~tf~s~~kve~~~ve~~~~qylY~dg~~~~fMD~e 94 (136)
T 1bkb_A 53 FDGGKRTLSLPVDAQVEVPIIEKFTAQILSVSGDVIQLMDMR 94 (136)
T ss_dssp TTCCEEEEEEETTSEEEECCCEEEEEEEEEECSSEEEEEETT
T ss_pred CCCCeEEEEEcCCCEeeeceEEEEEEEEEEecCCEEEEEeCC
Confidence 5888888899999999888876665543 78889998876
No 109
>3cpf_A Eukaryotic translation initiation factor 5A-1; structural genomics consortium, leukemia, apoptosis, SGC, HY initiation factor, nucleus; 2.50A {Homo sapiens}
Probab=37.33 E-value=55 Score=19.60 Aligned_cols=40 Identities=18% Similarity=0.210 Sum_probs=31.3
Q ss_pred CCCeEEeeeccCCCEEEeCCCCceEEEE---CCEEEEEEecCC
Q 045997 16 VNGKFIPVSVKEGDTVLLPEYGGAEVKL---GDKKYHLYEDES 55 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~y~g~ev~~---~g~~y~i~~e~D 55 (63)
.+|.......+.||++--+...-.+.++ ||..|.||..+.
T Consensus 51 ~TG~~~e~tf~s~~kve~~~v~~~~~qyly~dg~~~~fMD~et 93 (138)
T 3cpf_A 51 FTGKKYEDICPSTHNMDVPNIKRNDFQLIGIQDGYLSLLQDSG 93 (138)
T ss_dssp TTCCEEEEEEETTSEEEEECCEEEEEEEEEEETTEEEEECTTS
T ss_pred CCCCEEEEEeCCCCEEEeeEEEEEEEEEEEecCCEEEEEcCCC
Confidence 5888888899999999888876655543 788899887763
No 110
>2k1g_A Lipoprotein SPR; solution structure, bacterial lipoprotein, cysteine PEPT NPLC/P60 family, construct optimized, membrane, palmitate; NMR {Escherichia coli}
Probab=37.30 E-value=12 Score=22.52 Aligned_cols=19 Identities=32% Similarity=0.529 Sum_probs=13.8
Q ss_pred CCeEEee-eccCCCEEEeCC
Q 045997 17 NGKFIPV-SVKEGDTVLLPE 35 (63)
Q Consensus 17 ~G~~~p~-~vk~GD~Vl~~~ 35 (63)
.|..++. ++++||.|+|..
T Consensus 59 ~g~~V~~~~l~pGDLvFf~~ 78 (135)
T 2k1g_A 59 MGKSVSRSNLRTGDLVLFRA 78 (135)
T ss_dssp GSEEECGGGCCTTEEEEEEE
T ss_pred CCcEecHHHccCCcEEEECC
Confidence 3444443 799999999975
No 111
>1zrr_A E-2/E-2' protein; nickel, cupin, beta helix, methionine salvage, oxidoreductase; NMR {Klebsiella oxytoca} SCOP: b.82.1.6 PDB: 2hji_A
Probab=37.13 E-value=29 Score=21.71 Aligned_cols=36 Identities=14% Similarity=0.160 Sum_probs=23.8
Q ss_pred EEECCCeeCC--CCeEEeeeccCCCEEEeCCCCceEEE
Q 045997 7 VAVGPGARDV--NGKFIPVSVKEGDTVLLPEYGGAEVK 42 (63)
Q Consensus 7 vAVG~G~~~~--~G~~~p~~vk~GD~Vl~~~y~g~ev~ 42 (63)
+-=|.|...- +|+.....+++||.++++.-.--.+.
T Consensus 106 Vl~G~g~~~i~~~d~~~~~~l~~GDli~IP~g~~H~~~ 143 (179)
T 1zrr_A 106 FVEGAGLFCLHIGDEVFQVLCEKNDLISVPAHTPHWFD 143 (179)
T ss_dssp EEESCCCCCEECSSCEEEEECCCSCEEEECTTCCBCCC
T ss_pred EEcceEEEEEEeCCEEEEEEECCCCEEEECCCCeEeee
Confidence 3446666532 56666778999999999885433333
No 112
>2qgh_A Diaminopimelate decarboxylase; lyase; HET: PLP LYS; 2.30A {Helicobacter pylori} PDB: 3c5q_A*
Probab=37.07 E-value=57 Score=22.27 Aligned_cols=13 Identities=15% Similarity=0.473 Sum_probs=11.1
Q ss_pred eccCCCEEEeCCC
Q 045997 24 SVKEGDTVLLPEY 36 (63)
Q Consensus 24 ~vk~GD~Vl~~~y 36 (63)
.+++||.|.|...
T Consensus 363 ~~~~GD~v~~~~~ 375 (425)
T 2qgh_A 363 ELEPGDKIAIEKV 375 (425)
T ss_dssp CCCTTCEEEECSC
T ss_pred CCCCCCEEEEeCC
Confidence 7999999999663
No 113
>1fm0_D Molybdopterin convertin factor, subunit 1; molybdenum cofactor biosynthesis, transferase; 1.45A {Escherichia coli} SCOP: d.15.3.1 PDB: 1fma_D 1jw9_D 1jwa_D* 1jwb_D* 3bii_D 1nvi_D
Probab=37.02 E-value=23 Score=18.48 Aligned_cols=15 Identities=33% Similarity=0.709 Sum_probs=10.2
Q ss_pred eccCCCEEEe-CCCCc
Q 045997 24 SVKEGDTVLL-PEYGG 38 (63)
Q Consensus 24 ~vk~GD~Vl~-~~y~g 38 (63)
.++.||.|-| +..+|
T Consensus 65 ~l~~gD~V~i~Ppv~G 80 (81)
T 1fm0_D 65 PLTDGDEVAFFPPVTG 80 (81)
T ss_dssp BCCTTCEEEEECCCCC
T ss_pred CCCCCCEEEEeCCCCC
Confidence 6888998765 44444
No 114
>4axo_A EUTQ, ethanolamine utilization protein; structural protein, bacterial microcompartment, BMC; 1.00A {Clostridium difficile}
Probab=36.62 E-value=72 Score=19.40 Aligned_cols=16 Identities=25% Similarity=0.553 Sum_probs=13.6
Q ss_pred eeeccCCCEEEeCCCC
Q 045997 22 PVSVKEGDTVLLPEYG 37 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~ 37 (63)
...+++||.++|++-.
T Consensus 103 ~~~l~~GD~i~iP~G~ 118 (151)
T 4axo_A 103 KVSASSGELIFIPKGS 118 (151)
T ss_dssp EEEEETTCEEEECTTC
T ss_pred EEEEcCCCEEEECCCC
Confidence 5789999999999854
No 115
>1x82_A Glucose-6-phosphate isomerase; cupin superfamily, hyperthermophIle, phosphoglucose isomerase, extremeophIle; HET: PA5; 1.50A {Pyrococcus furiosus} SCOP: b.82.1.7 PDB: 1x7n_A* 1x8e_A 1qxr_A* 1qxj_A* 1qy4_A* 2gc1_A* 2gc0_A* 2gc2_A* 2gc3_A* 3sxw_A 1j3q_A 1j3p_A 1j3r_A*
Probab=36.44 E-value=44 Score=20.47 Aligned_cols=27 Identities=22% Similarity=0.301 Sum_probs=20.9
Q ss_pred CCeEEeeeccCCCEEEeCCCCceEEEE
Q 045997 17 NGKFIPVSVKEGDTVLLPEYGGAEVKL 43 (63)
Q Consensus 17 ~G~~~p~~vk~GD~Vl~~~y~g~ev~~ 43 (63)
.|+.....+++||.++++....-.+.-
T Consensus 115 ~g~~~~~~l~~GD~v~ip~g~~H~~~N 141 (190)
T 1x82_A 115 EGDAKWISMEPGTVVYVPPYWAHRTVN 141 (190)
T ss_dssp TCCEEEEEECTTCEEEECTTCEEEEEE
T ss_pred CCcEEEEEECCCcEEEECCCCeEEEEE
Confidence 366667899999999999876655544
No 116
>1qd7_I S17 ribosomal protein; 30S ribosomal subunit, low resolution model, ribosome; 5.50A {Thermus thermophilus} SCOP: i.1.1.3 PDB: 1eg0_G 1rip_A
Probab=36.39 E-value=12 Score=21.49 Aligned_cols=14 Identities=36% Similarity=0.323 Sum_probs=11.7
Q ss_pred eeccCCCEEEeCCC
Q 045997 23 VSVKEGDTVLLPEY 36 (63)
Q Consensus 23 ~~vk~GD~Vl~~~y 36 (63)
.++++||+|.+.+-
T Consensus 48 n~~k~GD~V~I~E~ 61 (89)
T 1qd7_I 48 NEAKVGDIVKIMET 61 (89)
T ss_pred cCCCCCCEEEEEEc
Confidence 37999999999763
No 117
>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*
Probab=35.98 E-value=14 Score=24.58 Aligned_cols=11 Identities=27% Similarity=0.438 Sum_probs=9.3
Q ss_pred eccCCCEEEeC
Q 045997 24 SVKEGDTVLLP 34 (63)
Q Consensus 24 ~vk~GD~Vl~~ 34 (63)
.+++||+|...
T Consensus 78 ~~~~GDrV~~~ 88 (366)
T 2cdc_A 78 GFSQGDLVMPV 88 (366)
T ss_dssp SCCTTCEEEEC
T ss_pred CCCCCCEEEEc
Confidence 58999999974
No 118
>3ef4_A Pseudoazurin, blue copper protein; electron transfer, electron transport; HET: PO4; 1.18A {Hyphomicrobium denitrificans} SCOP: b.6.1.0
Probab=35.54 E-value=24 Score=20.84 Aligned_cols=18 Identities=39% Similarity=0.469 Sum_probs=13.1
Q ss_pred eEEee--eccCCCEEEeCCC
Q 045997 19 KFIPV--SVKEGDTVLLPEY 36 (63)
Q Consensus 19 ~~~p~--~vk~GD~Vl~~~y 36 (63)
.+.|. .|++||+|.|...
T Consensus 18 ~F~P~~i~V~~GDTV~f~n~ 37 (124)
T 3ef4_A 18 VFQPGFVKVEAGDTVKFVPT 37 (124)
T ss_dssp EEESSEEEECTTCEEEEECS
T ss_pred EEeCCEEEECCCCEEEEEEC
Confidence 34444 8999999998653
No 119
>1xne_A Hypothetical protein PF0469; GFT structural genomics, protein structure initiative, NESG, PFR14, alpha and beta protein; NMR {Pyrococcus furiosus} SCOP: b.122.1.6
Probab=35.43 E-value=17 Score=21.47 Aligned_cols=12 Identities=25% Similarity=0.786 Sum_probs=10.5
Q ss_pred eccCCCEEEeCC
Q 045997 24 SVKEGDTVLLPE 35 (63)
Q Consensus 24 ~vk~GD~Vl~~~ 35 (63)
.+++||+++|.+
T Consensus 34 ~i~vGD~I~f~~ 45 (113)
T 1xne_A 34 DIKRGDKIIFND 45 (113)
T ss_dssp TCCTTCEEEETT
T ss_pred ccCCCCEEEEcc
Confidence 479999999977
No 120
>3n2b_A Diaminopimelate decarboxylase; LYSA, lyase, structural genom center for structural genomics of infectious diseases, CSGI; 1.80A {Vibrio cholerae}
Probab=35.28 E-value=62 Score=22.48 Aligned_cols=14 Identities=21% Similarity=0.446 Sum_probs=11.6
Q ss_pred eeeccCCCEEEeCC
Q 045997 22 PVSVKEGDTVLLPE 35 (63)
Q Consensus 22 p~~vk~GD~Vl~~~ 35 (63)
++++++||.++|..
T Consensus 379 ~l~l~~GD~l~~~~ 392 (441)
T 3n2b_A 379 DLVLQEGDLLAVRS 392 (441)
T ss_dssp EECCCTTCEEEESS
T ss_pred ccCCCCCCEEEEeC
Confidence 34799999999965
No 121
>3nul_A Profilin I; cytoskeleton, actin binding protein; HET: MSE; 1.60A {Arabidopsis thaliana} SCOP: d.110.1.1 PDB: 1a0k_A 1cqa_A 1g5u_A
Probab=35.07 E-value=26 Score=20.68 Aligned_cols=18 Identities=28% Similarity=0.469 Sum_probs=15.3
Q ss_pred CceEEEECCEEEEEEecC
Q 045997 37 GGAEVKLGDKKYHLYEDE 54 (63)
Q Consensus 37 ~g~ev~~~g~~y~i~~e~ 54 (63)
..+=+.++|++|+++|.+
T Consensus 60 ~~~Gl~l~G~Ky~~ir~d 77 (130)
T 3nul_A 60 APTGLFLGGEKYMVIQGE 77 (130)
T ss_dssp TTTCEEETTEEEEEEEEE
T ss_pred ccCCEEECCeEEEEEEeC
Confidence 345699999999999976
No 122
>2qqr_A JMJC domain-containing histone demethylation protein 3A; histone lysine demethylase, tandem hybrid tudor domains, metal binding protein; 1.80A {Homo sapiens} SCOP: b.34.9.1 b.34.9.1 PDB: 2qqs_A* 2gfa_A* 2gf7_A*
Probab=34.44 E-value=32 Score=20.64 Aligned_cols=32 Identities=19% Similarity=0.280 Sum_probs=20.8
Q ss_pred eeccCCCEEEeCC-----CCceEEEECCEEEEEEecC
Q 045997 23 VSVKEGDTVLLPE-----YGGAEVKLGDKKYHLYEDE 54 (63)
Q Consensus 23 ~~vk~GD~Vl~~~-----y~g~ev~~~g~~y~i~~e~ 54 (63)
.+|++||+|+-+. |.|+-+.+.-+.|..++-+
T Consensus 4 ~~v~vGq~V~akh~ngryy~~~V~~~~~~~~y~V~F~ 40 (118)
T 2qqr_A 4 QSITAGQKVISKHKNGRFYQCEVVRLTTETFYEVNFD 40 (118)
T ss_dssp SCCCTTCEEEEECTTSSEEEEEEEEEEEEEEEEEEET
T ss_pred ceeccCCEEEEECCCCCEEeEEEEEEeeEEEEEEEcC
Confidence 4799999998644 3445555556666666543
No 123
>3p42_A Predicted protein; beta-grAsp, unknown function; HET: MSE; 1.91A {Escherichia coli O127}
Probab=34.33 E-value=25 Score=22.91 Aligned_cols=29 Identities=17% Similarity=0.128 Sum_probs=18.0
Q ss_pred EEEEEECCCeeCCCCeEEeeeccCCCEEEeCCC
Q 045997 4 GKVVAVGPGARDVNGKFIPVSVKEGDTVLLPEY 36 (63)
Q Consensus 4 G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~~~y 36 (63)
|+|...+.+..+.+ ...+.|||+|+.+--
T Consensus 175 G~v~~~~~a~Wn~~----~~~l~PG~~I~Vp~~ 203 (236)
T 3p42_A 175 GETVVAPVALWNKR----HVEPPPGSQLWLGFS 203 (236)
T ss_dssp SCEEEEECSSTTCC----CEECCTTCEEEECBC
T ss_pred CCEEeccccccccC----CCCCCCCCEEEEeCC
Confidence 55555555433222 246999999998753
No 124
>3pjy_A Hypothetical signal peptide protein; DUF192 family protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.55A {Sinorhizobium meliloti}
Probab=34.06 E-value=13 Score=22.60 Aligned_cols=16 Identities=19% Similarity=0.196 Sum_probs=11.8
Q ss_pred eeccCCCEEEeCCCCc
Q 045997 23 VSVKEGDTVLLPEYGG 38 (63)
Q Consensus 23 ~~vk~GD~Vl~~~y~g 38 (63)
..+++||+|.++.++.
T Consensus 116 ~gi~~Gd~v~~~~~~~ 131 (136)
T 3pjy_A 116 LGVSPGDRLEGAGLPA 131 (136)
T ss_dssp HTCCTTCEEEETTC--
T ss_pred cCCCCCCEEEECccCc
Confidence 3589999999888763
No 125
>2kl0_A Putative thiamin biosynthesis THis; structural genomics, PSI-2, protein structure initiative, N structural genomics consortium, NESG; NMR {Rhodopseudomonas palustris} PDB: 2lek_A
Probab=33.94 E-value=22 Score=19.04 Aligned_cols=21 Identities=24% Similarity=0.332 Sum_probs=15.4
Q ss_pred CCeEEee------eccCCCEEEeCCCC
Q 045997 17 NGKFIPV------SVKEGDTVLLPEYG 37 (63)
Q Consensus 17 ~G~~~p~------~vk~GD~Vl~~~y~ 37 (63)
||+++|. .++.||+|-+-.+-
T Consensus 36 Ng~iVpr~~~~~~~L~dGD~veIv~~V 62 (73)
T 2kl0_A 36 NYDVVPRGKWDETPVTAGDEIEILTPR 62 (73)
T ss_dssp SSSEECHHHHTTCBCCTTCEEEEECCC
T ss_pred CCEECChHHcCcccCCCCCEEEEEccc
Confidence 5666665 59999999876643
No 126
>2ot2_A Hydrogenase isoenzymes formation protein HYPC; beta barrel, chaperone; NMR {Escherichia coli K12} SCOP: b.40.14.1
Probab=33.55 E-value=15 Score=20.99 Aligned_cols=32 Identities=22% Similarity=0.242 Sum_probs=19.1
Q ss_pred eEEEEEECCCe--eCCCCeEEe------------eeccCCCEEEeC
Q 045997 3 SGKVVAVGPGA--RDVNGKFIP------------VSVKEGDTVLLP 34 (63)
Q Consensus 3 ~G~VvAVG~G~--~~~~G~~~p------------~~vk~GD~Vl~~ 34 (63)
-|+|+++.++. .+-.|.+.. ..+++||.|+.-
T Consensus 6 P~kVvei~~~~A~Vd~~Gv~r~V~l~Lv~~~~~~~~~~vGD~VLVH 51 (90)
T 2ot2_A 6 PGQIRTIDGNQAKVDVCGIQRDVDLTLVGSCDENGQPRVGQWVLVH 51 (90)
T ss_dssp EEEEEEECSSEEEEECSSSEEEEECTTTCSBCTTSCBCTTCEEEEE
T ss_pred ceEEEEEcCCcEEEEcCCeEEEEEEeeeeccCCCCCCCCCCEEEEe
Confidence 36788884432 223443331 457899999874
No 127
>2hd9_A UPF0310 protein PH1033; pyrococcus horikoshii OT3, structural genomics, NPPSFA, NATI project on protein structural and functional analyses; HET: CIT; 1.35A {Pyrococcus horikoshii} SCOP: b.122.1.8 PDB: 1wmm_A* 2zbn_A
Probab=33.23 E-value=17 Score=21.98 Aligned_cols=11 Identities=36% Similarity=0.625 Sum_probs=9.7
Q ss_pred eccCCCEEEeC
Q 045997 24 SVKEGDTVLLP 34 (63)
Q Consensus 24 ~vk~GD~Vl~~ 34 (63)
.+|+||.++|=
T Consensus 34 ~mk~GD~~~fY 44 (145)
T 2hd9_A 34 RVKPGDKLVIY 44 (145)
T ss_dssp TCCTTCEEEEE
T ss_pred hCCCCCEEEEE
Confidence 79999999983
No 128
>1j58_A YVRK protein; cupin, decarboxyklase, oxalate, manganese, formate, metal BI protein; 1.75A {Bacillus subtilis} SCOP: b.82.1.2 PDB: 1l3j_A 1uw8_A 2uyb_A 2uy9_A 2uy8_A 2v09_A 2uya_A 3s0m_A
Probab=33.22 E-value=44 Score=22.31 Aligned_cols=27 Identities=22% Similarity=0.239 Sum_probs=19.9
Q ss_pred CCeEEeeeccCCCEEEeCCCCceEEEE
Q 045997 17 NGKFIPVSVKEGDTVLLPEYGGAEVKL 43 (63)
Q Consensus 17 ~G~~~p~~vk~GD~Vl~~~y~g~ev~~ 43 (63)
+|+.....+++||.++++....-.+..
T Consensus 118 ~g~~~~~~l~~GD~~~ip~g~~H~~~n 144 (385)
T 1j58_A 118 KGRSFIDDVGEGDLWYFPSGLPHSIQA 144 (385)
T ss_dssp TSCEEEEEEETTEEEEECTTCCEEEEE
T ss_pred CCcEEEEEeCCCCEEEECCCCeEEEEE
Confidence 566555689999999999876655544
No 129
>1z6h_A Biotin/lipoyl attachment protein; solution structure, biosynthetic protein; HET: BTI; NMR {Bacillus subtilis} PDB: 1z7t_A 2b8f_A 2b8g_A*
Probab=33.02 E-value=25 Score=17.73 Aligned_cols=11 Identities=18% Similarity=0.262 Sum_probs=5.8
Q ss_pred EecCCEEEEec
Q 045997 51 YEDESILGTLH 61 (63)
Q Consensus 51 ~~e~DIla~i~ 61 (63)
++..+.|+.+.
T Consensus 58 V~~G~~l~~i~ 68 (72)
T 1z6h_A 58 VNEGDVLLELS 68 (72)
T ss_dssp ECTTCEEEEEG
T ss_pred ECCCCEEEEEe
Confidence 35555555554
No 130
>1ok0_A Tendamistat, alpha-amylase inhibitor HOE-467A; 0.93A {Streptomyces tendae} SCOP: b.5.1.1 PDB: 1bvn_T 1hoe_A 2ait_A 3ait_A 4ait_A
Probab=32.91 E-value=17 Score=20.30 Aligned_cols=24 Identities=17% Similarity=0.181 Sum_probs=19.2
Q ss_pred CCCeEEee-eccCCCEEEeCC-CCce
Q 045997 16 VNGKFIPV-SVKEGDTVLLPE-YGGA 39 (63)
Q Consensus 16 ~~G~~~p~-~vk~GD~Vl~~~-y~g~ 39 (63)
.+|...|. .+.+||++-|.+ |-|.
T Consensus 38 ~dG~~~PCrv~~PG~~~Tfg~gy~g~ 63 (74)
T 1ok0_A 38 EDDTEGLCYAVAPGQITTVGDGYIGS 63 (74)
T ss_dssp TTSCBCCCEEECTTCEEEEEECTTST
T ss_pred eCCCcceeEEeCCCceEEeccccccc
Confidence 57777787 889999999987 7653
No 131
>4ejq_A Kinesin-like protein KIF1A; homodimer, FHA domain, transport protein; 1.89A {Homo sapiens} PDB: 2eh0_A 2g1l_A
Probab=32.85 E-value=30 Score=20.92 Aligned_cols=21 Identities=29% Similarity=0.656 Sum_probs=15.8
Q ss_pred CCCeEE--eeeccCCCEEEeCCC
Q 045997 16 VNGKFI--PVSVKEGDTVLLPEY 36 (63)
Q Consensus 16 ~~G~~~--p~~vk~GD~Vl~~~y 36 (63)
-||..+ |..++.||+|.|.++
T Consensus 114 VNG~~i~~~~~L~~GD~I~~G~~ 136 (154)
T 4ejq_A 114 VNGKKVTEPSILRSGNRIIMGKS 136 (154)
T ss_dssp ETTEECCSCEECCTTCEEEETTT
T ss_pred ECCEEcCCceECCCCCEEEECCc
Confidence 367765 457899999999764
No 132
>1nz9_A Transcription antitermination protein NUSG; transcription elongation, riken structural genomics/proteomics initiative, RSGI; NMR {Thermus thermophilus} SCOP: b.34.5.4
Probab=32.72 E-value=25 Score=17.73 Aligned_cols=17 Identities=29% Similarity=0.530 Sum_probs=12.7
Q ss_pred eeccCCCEEEeCC--CCce
Q 045997 23 VSVKEGDTVLLPE--YGGA 39 (63)
Q Consensus 23 ~~vk~GD~Vl~~~--y~g~ 39 (63)
..+++||+|.+.. |+|.
T Consensus 3 ~~~~~Gd~V~V~~Gpf~g~ 21 (58)
T 1nz9_A 3 VAFREGDQVRVVSGPFADF 21 (58)
T ss_dssp CSCCTTCEEEECSGGGTTC
T ss_pred cccCCCCEEEEeecCCCCc
Confidence 4678999999865 6654
No 133
>1sef_A Conserved hypothetical protein; structural genomics, nysgxrc target T1582, PSI, protein STRU initiative; 2.05A {Enterococcus faecalis} SCOP: b.82.1.11
Probab=31.76 E-value=76 Score=20.34 Aligned_cols=31 Identities=16% Similarity=0.171 Sum_probs=22.1
Q ss_pred eeeccCCCEEEeCCCCceEEEECC----EEEEEEe
Q 045997 22 PVSVKEGDTVLLPEYGGAEVKLGD----KKYHLYE 52 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~g~ev~~~g----~~y~i~~ 52 (63)
...+++||.++|+...-..+...+ -.|++++
T Consensus 222 ~~~l~~GD~i~i~~~~~H~~~n~~~~~~~~~l~~~ 256 (274)
T 1sef_A 222 WYPVEKGDYIFMSAYVPQAAYAVGREEPLMYVYSK 256 (274)
T ss_dssp EEEEETTCEEEECTTCCEEEEEECSSSCEEEEEEE
T ss_pred EEEECCCCEEEECCCCCEEEEeCCCCCCEEEEEEE
Confidence 468999999999987766665432 2666663
No 134
>1vjk_A Molybdopterin converting factor, subunit 1; structural genomics, PSI, protein structure INI southeast collaboratory for structural genomics; 1.51A {Pyrococcus furiosus} SCOP: d.15.3.1
Probab=31.47 E-value=22 Score=19.67 Aligned_cols=11 Identities=36% Similarity=0.492 Sum_probs=8.4
Q ss_pred eccCCCEEEeC
Q 045997 24 SVKEGDTVLLP 34 (63)
Q Consensus 24 ~vk~GD~Vl~~ 34 (63)
.++.||+|.|-
T Consensus 82 ~L~dGDeV~i~ 92 (98)
T 1vjk_A 82 ELKDGDVVGVF 92 (98)
T ss_dssp BCCTTCEEEEE
T ss_pred CCCCCCEEEEE
Confidence 68888887663
No 135
>2e6z_A Transcription elongation factor SPT5; KOW motif, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=31.40 E-value=25 Score=18.15 Aligned_cols=17 Identities=24% Similarity=0.196 Sum_probs=13.2
Q ss_pred eeccCCCEEEeCC--CCce
Q 045997 23 VSVKEGDTVLLPE--YGGA 39 (63)
Q Consensus 23 ~~vk~GD~Vl~~~--y~g~ 39 (63)
..+++||+|.+.+ |+|.
T Consensus 6 ~~f~~GD~V~V~~Gpf~g~ 24 (59)
T 2e6z_A 6 SGFQPGDNVEVCEGELINL 24 (59)
T ss_dssp SSCCTTSEEEECSSTTTTC
T ss_pred ccCCCCCEEEEeecCCCCC
Confidence 4689999999855 6664
No 136
>2xvs_A Tetratricopeptide repeat protein 5; antitumor protein, P53 cofactor, stress-response; 1.80A {Homo sapiens}
Probab=31.35 E-value=45 Score=21.08 Aligned_cols=30 Identities=30% Similarity=0.365 Sum_probs=20.9
Q ss_pred ccCCCEEEeCC--CCceEEEECCEEEE--EEecC
Q 045997 25 VKEGDTVLLPE--YGGAEVKLGDKKYH--LYEDE 54 (63)
Q Consensus 25 vk~GD~Vl~~~--y~g~ev~~~g~~y~--i~~e~ 54 (63)
++.||.|.+++ +--..+++.++.|- .+|-+
T Consensus 120 ~~iGDsV~IpeP~v~~v~i~~~~k~~~f~~IRVd 153 (166)
T 2xvs_A 120 VLIGDSVAIPEPNLRLHRIQHKGKDYSFSSVRVE 153 (166)
T ss_dssp CCTTCEEEEESCEEEEEEEEETTEEEEEEEEEES
T ss_pred eEecCEEEeCCCcEEEEecccCCceEEEeEEEEc
Confidence 89999999988 43456667787554 45544
No 137
>4dov_A ORC1, origin recognition complex subunit 1; DNA replication, replication; 1.70A {Mus musculus} PDB: 4dow_A*
Probab=31.32 E-value=29 Score=21.97 Aligned_cols=16 Identities=25% Similarity=0.391 Sum_probs=13.5
Q ss_pred eeeccCCCEEEeCCCC
Q 045997 22 PVSVKEGDTVLLPEYG 37 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~ 37 (63)
+..+++||.||+..-.
T Consensus 36 ~~~i~vGd~VLI~~~D 51 (163)
T 4dov_A 36 EIHIKVGQFVLIQGED 51 (163)
T ss_dssp EEEEETTCEEEECCSS
T ss_pred CeEEeeCCEEEEeCCc
Confidence 6799999999996654
No 138
>1plc_A Plastocyanin; electron transport; 1.33A {Populus nigra} SCOP: b.6.1.1 PDB: 1pnc_A 1pnd_A 1tkw_A* 2pcy_A 3pcy_A 4pcy_A 5pcy_A 6pcy_A 1jxg_A 1ag6_A 1ylb_B 2pcf_A* 1oow_A 1tef_A 9pcy_A 1teg_A 1byo_A
Probab=31.11 E-value=27 Score=18.71 Aligned_cols=19 Identities=21% Similarity=0.667 Sum_probs=13.8
Q ss_pred eEEe--eeccCCCEEEeCCCC
Q 045997 19 KFIP--VSVKEGDTVLLPEYG 37 (63)
Q Consensus 19 ~~~p--~~vk~GD~Vl~~~y~ 37 (63)
.+.| +.|++||+|.|...+
T Consensus 13 ~F~P~~i~v~~G~tV~~~n~~ 33 (99)
T 1plc_A 13 AFVPSEFSISPGEKIVFKNNA 33 (99)
T ss_dssp CEESSEEEECTTCEEEEEECS
T ss_pred eEeCCEEEECCCCEEEEEECC
Confidence 4555 488999999995443
No 139
>3gt2_A Putative uncharacterized protein; P60 domain, antigen, unknown function; HET: EDO; 1.75A {Mycobacterium avium subsp}
Probab=31.01 E-value=30 Score=20.51 Aligned_cols=19 Identities=21% Similarity=0.347 Sum_probs=14.2
Q ss_pred CCeEEee-eccCCCEEEeCC
Q 045997 17 NGKFIPV-SVKEGDTVLLPE 35 (63)
Q Consensus 17 ~G~~~p~-~vk~GD~Vl~~~ 35 (63)
.|..++. ++++||.|+|..
T Consensus 81 ~g~~v~~~~~~pGDlvff~~ 100 (142)
T 3gt2_A 81 VGQKILPQQARKGDLIFYGP 100 (142)
T ss_dssp SSEEECGGGCCTTCEEEESG
T ss_pred hCceechhhCCCCCEEEeCC
Confidence 4555554 799999999974
No 140
>1ueb_A EF-P, TT0860, elongation factor P; beta barrel, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.65A {Thermus thermophilus} SCOP: b.34.5.2 b.40.4.5 b.40.4.5 PDB: 3huw_V 3huy_V
Probab=30.90 E-value=74 Score=20.05 Aligned_cols=39 Identities=10% Similarity=0.103 Sum_probs=30.9
Q ss_pred CCCeEEeeeccCCCEEEeCCCCceEEEE---CCEEEEEEecC
Q 045997 16 VNGKFIPVSVKEGDTVLLPEYGGAEVKL---GDKKYHLYEDE 54 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~y~g~ev~~---~g~~y~i~~e~ 54 (63)
.+|.......+.||++--..-.-.+.++ +|..|.||..+
T Consensus 45 ~TG~~~e~tf~s~~kve~~~ver~~~qylY~dgd~~~FMD~e 86 (184)
T 1ueb_A 45 ETGATVERTFNSGEKLEDIYVETRELQYLYPEGEEMVFMDLE 86 (184)
T ss_dssp SSSCEEEEEEETTCEEEECCEEEEEEEEEEEETTEEEEEETT
T ss_pred CCCCEEEEEECCCCEEEeeeEEEEEEEEEEeCCCEEEEeeCC
Confidence 5888888899999999888766655543 68889988765
No 141
>1bxv_A Plastocyanin; copper protein, electron transfer; 1.80A {Synechococcus elongatus} SCOP: b.6.1.1 PDB: 1bxu_A
Probab=30.89 E-value=28 Score=18.13 Aligned_cols=28 Identities=25% Similarity=0.394 Sum_probs=17.0
Q ss_pred EEEECCCeeCCCCeEEee--eccCCCEEEeCC
Q 045997 6 VVAVGPGARDVNGKFIPV--SVKEGDTVLLPE 35 (63)
Q Consensus 6 VvAVG~G~~~~~G~~~p~--~vk~GD~Vl~~~ 35 (63)
.|.+|.. +.+-.+.|. .+++||+|.|..
T Consensus 4 ~v~~~~~--~~~~~f~P~~i~v~~Gd~V~~~n 33 (91)
T 1bxv_A 4 AIKMGAD--NGMLAFEPSTIEIQAGDTVQWVN 33 (91)
T ss_dssp EEEESCT--TSCSSEESSEEEECTTCEEEEEE
T ss_pred EEEEecC--CCccEEeCCEEEECCCCEEEEEE
Confidence 3566652 112244443 799999999964
No 142
>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*
Probab=30.87 E-value=68 Score=20.66 Aligned_cols=11 Identities=27% Similarity=0.398 Sum_probs=9.2
Q ss_pred eccCCCEEEeC
Q 045997 24 SVKEGDTVLLP 34 (63)
Q Consensus 24 ~vk~GD~Vl~~ 34 (63)
.+++||+|...
T Consensus 82 ~~~vGdrV~~~ 92 (333)
T 1v3u_A 82 AFPAGSIVLAQ 92 (333)
T ss_dssp TSCTTCEEEEC
T ss_pred CCCCCCEEEec
Confidence 58999999864
No 143
>1iuz_A Plastocyanin; electron transport; 1.60A {Ulva pertusa} SCOP: b.6.1.1 PDB: 7pcy_A
Probab=30.48 E-value=26 Score=18.96 Aligned_cols=19 Identities=26% Similarity=0.632 Sum_probs=13.5
Q ss_pred eEEe--eeccCCCEEEeCCCC
Q 045997 19 KFIP--VSVKEGDTVLLPEYG 37 (63)
Q Consensus 19 ~~~p--~~vk~GD~Vl~~~y~ 37 (63)
.+.| +.|++||+|.|...+
T Consensus 14 ~F~P~~i~v~~GdtV~~~n~~ 34 (98)
T 1iuz_A 14 AFVPSKISVAAGEAIEFVNNA 34 (98)
T ss_dssp SEESSEEEECTTCEEEEEECS
T ss_pred EEeCCEEEECCCCEEEEEECC
Confidence 4444 488999999986433
No 144
>2qcp_X Cation efflux system protein CUSF; silver-binding, copper-binding, beta barrel, OB-fold, metall metal resistance, metal-binding; 1.00A {Escherichia coli str} PDB: 1zeq_X 3e6z_X
Probab=30.44 E-value=22 Score=19.50 Aligned_cols=13 Identities=31% Similarity=0.455 Sum_probs=10.2
Q ss_pred eeeccCCCEEEeC
Q 045997 22 PVSVKEGDTVLLP 34 (63)
Q Consensus 22 p~~vk~GD~Vl~~ 34 (63)
...+|+||+|-|.
T Consensus 51 l~~lk~Gd~V~F~ 63 (80)
T 2qcp_X 51 MSEIKTGDKVAFN 63 (80)
T ss_dssp ECCCCTTCEEEEE
T ss_pred hhcCCCCCEEEEE
Confidence 3479999999874
No 145
>3tu6_A Pseudoazurin (blue copper protein); cupredoxins, beta barrel, electron transfer, redox, electron transport; 2.00A {Sinorhizobium meliloti}
Probab=30.20 E-value=25 Score=20.75 Aligned_cols=19 Identities=32% Similarity=0.468 Sum_probs=13.6
Q ss_pred eEEee--eccCCCEEEeCCCC
Q 045997 19 KFIPV--SVKEGDTVLLPEYG 37 (63)
Q Consensus 19 ~~~p~--~vk~GD~Vl~~~y~ 37 (63)
.+.|. .|++||+|.|.-..
T Consensus 19 ~F~P~~i~V~~GDtVtf~n~~ 39 (127)
T 3tu6_A 19 AFEPAVIRAQPGDTVTFVAKD 39 (127)
T ss_dssp EEESSEEEECTTCEEEEECSS
T ss_pred EEeCCEEEECCCCEEEEEECC
Confidence 34444 89999999986543
No 146
>1yby_A Translation elongation factor P; conserved hypothetical protein, structural genomics, PSI, protein structure initiative; 1.95A {Clostridium thermocellum}
Probab=29.90 E-value=68 Score=20.85 Aligned_cols=39 Identities=15% Similarity=0.244 Sum_probs=30.7
Q ss_pred CCCeEEeeeccCCCEEEeCCCCceEEEE---CCEEEEEEecC
Q 045997 16 VNGKFIPVSVKEGDTVLLPEYGGAEVKL---GDKKYHLYEDE 54 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~y~g~ev~~---~g~~y~i~~e~ 54 (63)
.+|.......+.||+|--....-.+.++ ||..|.||..+
T Consensus 75 ~TG~~~e~tf~s~ekve~a~verr~~QylY~Dgd~y~FMD~E 116 (215)
T 1yby_A 75 VTGATIEKTFNPTDKMPKAHIERKDMQYLYNDGDLYYFMDTE 116 (215)
T ss_dssp TTCCEEEEEECTTCEECBCCCEEEEEEEEEEETTEEEEECTT
T ss_pred CCCCEEEEEECCCCEEecceEEEEEEEEEEeCCCEEEEccCC
Confidence 5888888899999998877766655543 68889988765
No 147
>1tyg_B YJBS; alpha beta barrel, protein-protein complex, THis, BIOS protein; 3.15A {Bacillus subtilis} SCOP: d.15.3.2
Probab=29.90 E-value=32 Score=19.21 Aligned_cols=19 Identities=16% Similarity=0.228 Sum_probs=12.5
Q ss_pred CCeEEee------eccCCCEEEeCC
Q 045997 17 NGKFIPV------SVKEGDTVLLPE 35 (63)
Q Consensus 17 ~G~~~p~------~vk~GD~Vl~~~ 35 (63)
||+++|. .++.||+|-|-.
T Consensus 58 Ng~iV~~~~~~~~~L~dGD~Vei~~ 82 (87)
T 1tyg_B 58 NKEIIGKERYHEVELCDRDVIEIVH 82 (87)
T ss_dssp TTEEECGGGTTTSBCCSSSEEEEEE
T ss_pred CCEECChhhcCCcCCCCCCEEEEEc
Confidence 5556553 588888887643
No 148
>2jov_A Hypothetical protein CPE0013; alpha + beta sandwich, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens} SCOP: d.349.1.1
Probab=29.77 E-value=22 Score=20.33 Aligned_cols=22 Identities=18% Similarity=0.295 Sum_probs=15.3
Q ss_pred CCeEEeeeccCCCEEEeCCCCce
Q 045997 17 NGKFIPVSVKEGDTVLLPEYGGA 39 (63)
Q Consensus 17 ~G~~~p~~vk~GD~Vl~~~y~g~ 39 (63)
++-.+.-+|+.||.|+ +...|+
T Consensus 42 ~~i~V~APV~iGDVIi-~ni~gT 63 (85)
T 2jov_A 42 SRLYVGVPTKSGNVVC-KNIMNT 63 (85)
T ss_dssp TTCEECCCCCSSEEEE-ESTTSS
T ss_pred hCCEEcCCcccCCEEE-ecccCC
Confidence 3345667999999655 776655
No 149
>2p5d_A UPF0310 protein mjecl36; NPPSFA, national project on protein structural and functional analyses; 1.70A {Methanocaldococcus jannaschii}
Probab=29.76 E-value=21 Score=21.60 Aligned_cols=11 Identities=36% Similarity=0.622 Sum_probs=10.0
Q ss_pred eccCCCEEEeC
Q 045997 24 SVKEGDTVLLP 34 (63)
Q Consensus 24 ~vk~GD~Vl~~ 34 (63)
.+|+||.++|=
T Consensus 37 ~Mk~GD~~~fY 47 (147)
T 2p5d_A 37 KVKVGDKLIIY 47 (147)
T ss_dssp TCCTTCEEEEE
T ss_pred hCCCCCEEEEE
Confidence 69999999986
No 150
>2xdp_A Lysine-specific demethylase 4C; oxidoreductase, histone modification; 1.56A {Homo sapiens}
Probab=29.39 E-value=32 Score=20.74 Aligned_cols=34 Identities=12% Similarity=0.161 Sum_probs=22.0
Q ss_pred eeeccCCCEEEeCC-----CCceEEEECCEEEEEEecCC
Q 045997 22 PVSVKEGDTVLLPE-----YGGAEVKLGDKKYHLYEDES 55 (63)
Q Consensus 22 p~~vk~GD~Vl~~~-----y~g~ev~~~g~~y~i~~e~D 55 (63)
+.+|++||+|+-+. |.|+-+.+.-+.|..++-+|
T Consensus 4 ~~~v~vGq~V~ak~~ngryy~~~V~~~~~~~~y~V~F~D 42 (123)
T 2xdp_A 4 EKVISVGQTVITKHRNTRYYSCRVMAVTSQTFYEVMFDD 42 (123)
T ss_dssp CCCCCTTCCCCCCCCCCCCCCCEEEEEEEEEEEEEEETT
T ss_pred ccccccCCEEEEECCCCcEEeEEEEEEeeEEEEEEEcCC
Confidence 45799999998543 44555555566776666433
No 151
>2z0t_A Putative uncharacterized protein PH0355; alpha/beta protein, RNA binding protein, structural genomics, NPPSFA; 1.80A {Pyrococcus horikoshii} PDB: 1s04_A
Probab=29.28 E-value=23 Score=20.85 Aligned_cols=10 Identities=30% Similarity=0.820 Sum_probs=9.1
Q ss_pred eccCCCEEEe
Q 045997 24 SVKEGDTVLL 33 (63)
Q Consensus 24 ~vk~GD~Vl~ 33 (63)
.+++||+++|
T Consensus 33 ~ikvGD~I~f 42 (109)
T 2z0t_A 33 QIKPGDIIIF 42 (109)
T ss_dssp GCCTTCEEEE
T ss_pred cCCCCCEEEE
Confidence 5799999999
No 152
>2vv5_A MSCS, small-conductance mechanosensitive channel; ION transport, transmembrane, inner membrane, membrane struc membrane protein, membrane; 3.45A {Escherichia coli} SCOP: b.38.1.3 d.58.43.1 f.34.1.1 PDB: 2oau_A
Probab=28.91 E-value=36 Score=22.37 Aligned_cols=21 Identities=19% Similarity=0.303 Sum_probs=16.9
Q ss_pred eccCCCEEEeCCCCceEEEEC
Q 045997 24 SVKEGDTVLLPEYGGAEVKLG 44 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g~ev~~~ 44 (63)
++++||.|.+..+.|+-.+++
T Consensus 129 pf~vGD~I~i~g~~G~V~~I~ 149 (286)
T 2vv5_A 129 PFRAGEYVDLGGVAGTVLSVQ 149 (286)
T ss_dssp SSCTTCEEESSSCEEEEEEEC
T ss_pred CccCCCEEEECCEEEEEEEEE
Confidence 789999999999888655444
No 153
>3r8n_Q 30S ribosomal protein S17; protein biosynthesis, RNA, tRNA, transfer RNA, 16S ribosomal subunit, RRF; 3.00A {Escherichia coli} PDB: 2ykr_Q 3fih_Q* 3iy8_Q 3j18_Q* 2wwl_Q 3oar_Q 3oaq_Q 3ofb_Q 3ofa_Q 3ofp_Q 3ofx_Q 3ofy_Q 3ofo_Q 3r8o_Q 4a2i_Q 4gd1_Q 4gd2_Q 3i1m_Q 1vs7_Q* 3e1a_J ...
Probab=28.88 E-value=18 Score=20.22 Aligned_cols=13 Identities=31% Similarity=0.299 Sum_probs=11.1
Q ss_pred eeccCCCEEEeCC
Q 045997 23 VSVKEGDTVLLPE 35 (63)
Q Consensus 23 ~~vk~GD~Vl~~~ 35 (63)
.++++||+|.+.+
T Consensus 48 n~~~~GD~V~I~e 60 (80)
T 3r8n_Q 48 NECGIGDVVEIRE 60 (80)
T ss_dssp GCCCTTCEEEEEE
T ss_pred CCCCCCCEEEEEE
Confidence 3799999999876
No 154
>1k8m_A E2 component of branched-chain ahpha-ketoacid dehydrogenase; lipoyl acid bearing, human BCKD, experimental DATA, average structure, transferase; NMR {Homo sapiens} SCOP: b.84.1.1 PDB: 1k8o_A
Probab=28.76 E-value=32 Score=18.88 Aligned_cols=16 Identities=44% Similarity=0.337 Sum_probs=12.1
Q ss_pred CCCeEEeeeccCCCEE
Q 045997 16 VNGKFIPVSVKEGDTV 31 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~V 31 (63)
..|......+++||+|
T Consensus 17 ~~G~v~~~~v~~Gd~V 32 (93)
T 1k8m_A 17 REVTVKEWYVKEGDTV 32 (93)
T ss_dssp CCEEEEEECCCTTCEE
T ss_pred CCEEEEEEEcCCcCEE
Confidence 5677777788888875
No 155
>2vqa_A SLL1358 protein, MNCA; periplasmic binding protein, metal-binding protein, cupin, BI-cupin, oxalate decarboxylase; 2.95A {Synechocystis SP}
Probab=28.58 E-value=59 Score=21.39 Aligned_cols=28 Identities=21% Similarity=0.209 Sum_probs=20.4
Q ss_pred CCeEEeeeccCCCEEEeCCCCceEEEEC
Q 045997 17 NGKFIPVSVKEGDTVLLPEYGGAEVKLG 44 (63)
Q Consensus 17 ~G~~~p~~vk~GD~Vl~~~y~g~ev~~~ 44 (63)
+|+.....+++||.++++......+.-.
T Consensus 92 ~g~~~~~~l~~GD~~~ip~g~~H~~~n~ 119 (361)
T 2vqa_A 92 EGKVEIADVDKGGLWYFPRGWGHSIEGI 119 (361)
T ss_dssp TSCEEEEEEETTEEEEECTTCEEEEEEC
T ss_pred CCcEEEEEEcCCCEEEECCCCeEEEEeC
Confidence 4444457899999999998776666554
No 156
>1vr3_A Acireductone dioxygenase; 13543033, structural genomics, JOI for structural genomics, JCSG, protein structure initiative oxidoreductase; 2.06A {Mus musculus} SCOP: b.82.1.6
Probab=28.44 E-value=65 Score=20.46 Aligned_cols=29 Identities=31% Similarity=0.469 Sum_probs=20.9
Q ss_pred CeEEeeeccCCCEEEeCCCCceEEEECCE
Q 045997 18 GKFIPVSVKEGDTVLLPEYGGAEVKLGDK 46 (63)
Q Consensus 18 G~~~p~~vk~GD~Vl~~~y~g~ev~~~g~ 46 (63)
++.....+++||.++++.-.--.+..+..
T Consensus 124 d~~~~i~v~~GDlIiIPaG~~H~f~~~~~ 152 (191)
T 1vr3_A 124 DKWIRISMEKGDMITLPAGIYHRFTLDEK 152 (191)
T ss_dssp SCEEEEEEETTEEEEECTTCCEEEEECTT
T ss_pred CeEEEEEECCCCEEEECcCCcCCcccCCC
Confidence 44556789999999999866556665443
No 157
>3fm8_A Kinesin-like protein KIF13B; kinesin, GAP, GTPase activation, structural genomics consort ATP-binding, cytoskeleton, microtubule, motor protein, NUCL binding; 2.30A {Homo sapiens} PDB: 3mdb_A*
Probab=28.43 E-value=40 Score=19.85 Aligned_cols=21 Identities=33% Similarity=0.688 Sum_probs=15.7
Q ss_pred CCCeEE--eeeccCCCEEEeCCC
Q 045997 16 VNGKFI--PVSVKEGDTVLLPEY 36 (63)
Q Consensus 16 ~~G~~~--p~~vk~GD~Vl~~~y 36 (63)
-||+.+ |..++.||+|.+.++
T Consensus 94 VNG~~V~~~~~L~~GD~I~lG~~ 116 (124)
T 3fm8_A 94 VNGSSVSSPIQLHHGDRILWGNN 116 (124)
T ss_dssp ETTEECCSCEEECTTCEEEETTT
T ss_pred ECCEEcCCcEECCCCCEEEECCC
Confidence 366665 458999999998765
No 158
>2vb2_X Copper protein, cation efflux system protein CUSF; cation PI, metal-binding, metal transport, copper tolerance, transport; 1.70A {Escherichia coli} PDB: 2vb3_X
Probab=28.41 E-value=25 Score=19.66 Aligned_cols=12 Identities=33% Similarity=0.559 Sum_probs=9.9
Q ss_pred eeccCCCEEEeC
Q 045997 23 VSVKEGDTVLLP 34 (63)
Q Consensus 23 ~~vk~GD~Vl~~ 34 (63)
..+|+||+|-|.
T Consensus 60 ~~lk~Gd~V~F~ 71 (88)
T 2vb2_X 60 SEIKTGDKVAFN 71 (88)
T ss_dssp CCCCTTCEEEEE
T ss_pred hcCCCCCEEEEE
Confidence 479999999874
No 159
>3mxn_B RECQ-mediated genome instability protein 2; bloom syndrome, helicase, RMI, topoisomerase, replication PR replication; 1.55A {Homo sapiens} PDB: 4day_B 3nbh_B
Probab=28.39 E-value=85 Score=19.66 Aligned_cols=31 Identities=32% Similarity=0.556 Sum_probs=19.8
Q ss_pred eEEEEEECCCe---eCCCCeEEe----------eeccCCCEEEe
Q 045997 3 SGKVVAVGPGA---RDVNGKFIP----------VSVKEGDTVLL 33 (63)
Q Consensus 3 ~G~VvAVG~G~---~~~~G~~~p----------~~vk~GD~Vl~ 33 (63)
+|+||+.+.|. .+.+|.+.- ..+++|..|.+
T Consensus 64 QG~VV~~~~g~~~LdDgTG~~~v~g~~~vp~g~p~l~~G~YVMV 107 (150)
T 3mxn_B 64 QGRVVMADRGEARLRDPSGDFSVRGLERVPRGRPCLVPGKYVMV 107 (150)
T ss_dssp EEEEEEEETTEEEEEETTEEEEEECGGGSCCCSCCCSTTCEEEE
T ss_pred EeEEEEeCCCeEEEECCCceEEEeeccccCCCCcccCCCCEEEE
Confidence 69999987775 234554432 24678888765
No 160
>1b3i_A PETE protein, protein (plastocyanin); electron transport, type I copper protein, photosynthesis; NMR {Prochlorothrix hollandica} SCOP: b.6.1.1 PDB: 2b3i_A 2jxm_A*
Probab=28.03 E-value=33 Score=18.21 Aligned_cols=13 Identities=38% Similarity=0.509 Sum_probs=10.8
Q ss_pred eeccCCCEEEeCC
Q 045997 23 VSVKEGDTVLLPE 35 (63)
Q Consensus 23 ~~vk~GD~Vl~~~ 35 (63)
+.|++||+|.|..
T Consensus 21 i~v~~G~~V~~~n 33 (97)
T 1b3i_A 21 LSISAGDTVEFVM 33 (97)
T ss_dssp EEECTTCEEEEEE
T ss_pred EEECCCCEEEEEE
Confidence 4889999999864
No 161
>2d5d_A Methylmalonyl-COA decarboxylase gamma chain; biotin, BCCP, structural genomics, NPPSFA; 1.55A {Pyrococcus horikoshii} PDB: 2ejf_C* 2ejg_C* 2evb_A
Probab=27.95 E-value=35 Score=17.11 Aligned_cols=15 Identities=47% Similarity=0.687 Sum_probs=7.5
Q ss_pred CCeEEeeeccCCCEE
Q 045997 17 NGKFIPVSVKEGDTV 31 (63)
Q Consensus 17 ~G~~~p~~vk~GD~V 31 (63)
.|......+++||+|
T Consensus 13 ~G~v~~~~v~~G~~V 27 (74)
T 2d5d_A 13 PGKVLRVLVRVGDRV 27 (74)
T ss_dssp CEEEEEECCCTTCEE
T ss_pred CEEEEEEEcCCCCEe
Confidence 344444555555554
No 162
>2gim_A Plastocyanin; beta sheet, Cu, helix, electron transport; 1.60A {Anabaena variabilis} SCOP: b.6.1.1 PDB: 1fa4_A 1nin_A 1tu2_A* 2cj3_A
Probab=27.91 E-value=33 Score=18.48 Aligned_cols=16 Identities=44% Similarity=0.696 Sum_probs=12.2
Q ss_pred eEEe--eeccCCCEEEeC
Q 045997 19 KFIP--VSVKEGDTVLLP 34 (63)
Q Consensus 19 ~~~p--~~vk~GD~Vl~~ 34 (63)
.+.| +.|++||+|.|.
T Consensus 16 ~F~P~~i~v~~Gd~V~~~ 33 (106)
T 2gim_A 16 VFEPAKLTIKPGDTVEFL 33 (106)
T ss_dssp SEESSEEEECTTCEEEEE
T ss_pred eEcCCEEEECCCCEEEEE
Confidence 4444 478999999985
No 163
>3erx_A Pseudoazurin; copper protein, high-resolution, E transport, metal-binding, transport; 1.25A {Paracoccus pantotrophus} SCOP: b.6.1.1 PDB: 1adw_A
Probab=27.62 E-value=23 Score=20.77 Aligned_cols=13 Identities=23% Similarity=0.388 Sum_probs=10.9
Q ss_pred eeccCCCEEEeCC
Q 045997 23 VSVKEGDTVLLPE 35 (63)
Q Consensus 23 ~~vk~GD~Vl~~~ 35 (63)
+.|++||+|.|.-
T Consensus 23 i~V~~GdtV~f~~ 35 (123)
T 3erx_A 23 VRAEPGDVINFVP 35 (123)
T ss_dssp EEECTTEEEEEEE
T ss_pred EEECCCCEEEEEE
Confidence 3899999999854
No 164
>3nec_A Profilin, inflammatory profilin; actin-binding, actin-binding protein; HET: MSE; 1.70A {Toxoplasma gondii}
Probab=27.22 E-value=36 Score=21.22 Aligned_cols=19 Identities=26% Similarity=0.429 Sum_probs=15.8
Q ss_pred CceEEEECCEEEEEEecCC
Q 045997 37 GGAEVKLGDKKYHLYEDES 55 (63)
Q Consensus 37 ~g~ev~~~g~~y~i~~e~D 55 (63)
..+=+.++|++|+++|.++
T Consensus 85 ~~~Gl~lgG~KY~~ir~d~ 103 (166)
T 3nec_A 85 APNGVWIGGQKYKVVRPEK 103 (166)
T ss_dssp CTTCEEETTEEEEEEEEEE
T ss_pred ccCCeEEeCeEEEEEEecC
Confidence 3455999999999999885
No 165
>1o5u_A Novel thermotoga maritima enzyme TM1112; cupin, structural genomics center for structural genomics, JCSG, protein structure INI PSI; 1.83A {Thermotoga maritima} SCOP: b.82.1.8 PDB: 1lkn_A 2k9z_A
Probab=27.20 E-value=38 Score=18.83 Aligned_cols=20 Identities=20% Similarity=0.245 Sum_probs=15.1
Q ss_pred eeeccCCCEEEeCCCCceEE
Q 045997 22 PVSVKEGDTVLLPEYGGAEV 41 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~g~ev 41 (63)
+..+++||.++|+.-.--.+
T Consensus 69 ~~~l~~GD~i~ip~g~~H~~ 88 (101)
T 1o5u_A 69 KYVIEKGDLVTFPKGLRCRW 88 (101)
T ss_dssp EEEEETTCEEEECTTCEEEE
T ss_pred EEEECCCCEEEECCCCcEEE
Confidence 45899999999998554333
No 166
>2kij_A Copper-transporting ATPase 1; actuator, menkes disease, alternative splicing, ATP-binding, cell membrane, cytoplasm, disease mutation; NMR {Homo sapiens}
Probab=27.10 E-value=62 Score=18.72 Aligned_cols=12 Identities=25% Similarity=0.401 Sum_probs=10.8
Q ss_pred eccCCCEEEeCC
Q 045997 24 SVKEGDTVLLPE 35 (63)
Q Consensus 24 ~vk~GD~Vl~~~ 35 (63)
.+.+||.|++..
T Consensus 41 ~l~~GDiv~v~~ 52 (124)
T 2kij_A 41 LVQRGDIIKVVP 52 (124)
T ss_dssp TCCTTCEEECCT
T ss_pred HCCCCCEEEECC
Confidence 799999999976
No 167
>2v8f_A Profilin-2, profilin IIA; alternative splicing, protein-binding, cytoplasm, acetylation, cytoskeleton, actin-binding; 1.1A {Mus musculus} PDB: 2v8c_A 2vk3_A* 1d1j_A*
Probab=27.07 E-value=49 Score=19.85 Aligned_cols=15 Identities=33% Similarity=0.512 Sum_probs=13.2
Q ss_pred eEEEECCEEEEEEec
Q 045997 39 AEVKLGDKKYHLYED 53 (63)
Q Consensus 39 ~ev~~~g~~y~i~~e 53 (63)
+=+.++|++|+++|.
T Consensus 62 ~Gl~l~G~Ky~~ir~ 76 (140)
T 2v8f_A 62 NGLTLGAKKCSVIRD 76 (140)
T ss_dssp HCEEETTEEEEEEEE
T ss_pred CCeEECCEEEEEEec
Confidence 348999999999998
No 168
>2plt_A Plastocyanin; electron transport; 1.50A {Chlamydomonas reinhardtii} SCOP: b.6.1.1
Probab=26.98 E-value=32 Score=18.27 Aligned_cols=19 Identities=32% Similarity=0.721 Sum_probs=13.5
Q ss_pred eEEe--eeccCCCEEEeCCCC
Q 045997 19 KFIP--VSVKEGDTVLLPEYG 37 (63)
Q Consensus 19 ~~~p--~~vk~GD~Vl~~~y~ 37 (63)
.+.| +.|++||+|.|...+
T Consensus 14 ~F~P~~i~v~~G~~V~~~n~~ 34 (98)
T 2plt_A 14 EFVPKTLTIKSGETVNFVNNA 34 (98)
T ss_dssp SEESSEEEECTTCEEEEEECS
T ss_pred eEeCCEEEECCCCEEEEEECC
Confidence 4454 478999999985443
No 169
>2vqe_Q 30S ribosomal protein S17; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: b.40.4.5 PDB: 1gix_T* 1hnw_Q* 1hnx_Q* 1hnz_Q* 1hr0_Q 1ibk_Q* 1ibl_Q* 1ibm_Q 1jgo_T* 1jgp_T* 1jgq_T* 1ml5_T* 1xmo_Q* 1xmq_Q* 1xnq_Q* 1xnr_Q* 1yl4_T 2b64_Q* 2b9m_Q* 2b9o_Q* ...
Probab=26.94 E-value=17 Score=21.41 Aligned_cols=13 Identities=38% Similarity=0.340 Sum_probs=11.1
Q ss_pred eccCCCEEEeCCC
Q 045997 24 SVKEGDTVLLPEY 36 (63)
Q Consensus 24 ~vk~GD~Vl~~~y 36 (63)
.+++||+|.+.+-
T Consensus 50 ~~k~GD~V~I~E~ 62 (105)
T 2vqe_Q 50 KYKLGDVVEIIES 62 (105)
T ss_dssp CCCTTCEEEEEEE
T ss_pred CCCCCCEEEEEEc
Confidence 7999999998663
No 170
>2ker_A Parvulustat, alpha-amylase inhibitor Z-2685; parvulustat (Z-2685), hydrolase inhibitor; NMR {Streptomyces parvulus}
Probab=26.49 E-value=15 Score=20.71 Aligned_cols=22 Identities=23% Similarity=0.613 Sum_probs=18.7
Q ss_pred CCCeEEee-eccCCCEEEeCCCC
Q 045997 16 VNGKFIPV-SVKEGDTVLLPEYG 37 (63)
Q Consensus 16 ~~G~~~p~-~vk~GD~Vl~~~y~ 37 (63)
.+|...|. .+.+||++-|+-|+
T Consensus 36 ~dG~~~PCrv~~PG~~~Tf~GyG 58 (78)
T 2ker_A 36 THGQWAPCRVIEPGGWATFAGYG 58 (78)
T ss_dssp SSCCSCCCEEECTTCCCEEECSC
T ss_pred eCCCcceeEEeCCCCEEEecccc
Confidence 56777777 88999999999997
No 171
>4egx_A Kinesin-like protein KIF1A; FHA domain, transport protein; 2.51A {Homo sapiens}
Probab=26.34 E-value=43 Score=20.94 Aligned_cols=21 Identities=29% Similarity=0.656 Sum_probs=16.4
Q ss_pred CCCeEE--eeeccCCCEEEeCCC
Q 045997 16 VNGKFI--PVSVKEGDTVLLPEY 36 (63)
Q Consensus 16 ~~G~~~--p~~vk~GD~Vl~~~y 36 (63)
-||..+ |..++-||+|+|...
T Consensus 144 VNG~~I~~~~~L~~GDrI~lG~~ 166 (184)
T 4egx_A 144 VNGKKVTEPSILRSGNRIIMGKS 166 (184)
T ss_dssp ETTEECCSCEECCTTCEEEETTT
T ss_pred EcCEEccccEEcCCCCEEEECCC
Confidence 467765 568999999999864
No 172
>3dm3_A Replication factor A; probably plays AN essential for replication of the chromosome, DNA recombination and repair; 2.40A {Methanocaldococcus jannaschii}
Probab=26.24 E-value=82 Score=17.79 Aligned_cols=10 Identities=40% Similarity=0.521 Sum_probs=8.1
Q ss_pred eccCCCEEEe
Q 045997 24 SVKEGDTVLL 33 (63)
Q Consensus 24 ~vk~GD~Vl~ 33 (63)
.+++||.|.|
T Consensus 66 ~l~~Gdvv~i 75 (105)
T 3dm3_A 66 DVGRGDYVRV 75 (105)
T ss_dssp CCCTTCEEEE
T ss_pred ccCCCCEEEE
Confidence 4788888888
No 173
>1pcs_A Plastocyanin; electron transport; 2.15A {Synechocystis SP} SCOP: b.6.1.1 PDB: 1m9w_A 1j5c_A 1j5d_A 1jxd_A 1jxf_A
Probab=26.16 E-value=38 Score=18.02 Aligned_cols=18 Identities=33% Similarity=0.536 Sum_probs=13.2
Q ss_pred eEEe--eeccCCCEEEeCCC
Q 045997 19 KFIP--VSVKEGDTVLLPEY 36 (63)
Q Consensus 19 ~~~p--~~vk~GD~Vl~~~y 36 (63)
.+.| +.|++||+|.|..-
T Consensus 15 ~F~P~~i~v~~G~~V~~~n~ 34 (98)
T 1pcs_A 15 VFEPSTVTIKAGEEVKWVNN 34 (98)
T ss_dssp SEESSEEEECTTCEEEEEEC
T ss_pred EEeCCEEEECCCCEEEEEEC
Confidence 4454 48999999999643
No 174
>2l5t_A Lipoamide acyltransferase; E2 lipoyl domain; NMR {Thermoplasma acidophilum}
Probab=26.00 E-value=39 Score=17.35 Aligned_cols=17 Identities=41% Similarity=0.614 Sum_probs=11.9
Q ss_pred CCCeEEeeeccCCCEEE
Q 045997 16 VNGKFIPVSVKEGDTVL 32 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl 32 (63)
..|......+++||+|-
T Consensus 14 ~~G~v~~~~v~~G~~V~ 30 (77)
T 2l5t_A 14 TEGEIVRWDVKEGDMVE 30 (77)
T ss_dssp CCEEEEECSCCTTCEEC
T ss_pred ccEEEEEEEeCCCCEEC
Confidence 46677777778888753
No 175
>1uhe_A Aspartate 1-decarboxylase alpha chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_A
Probab=25.77 E-value=16 Score=21.46 Aligned_cols=15 Identities=33% Similarity=0.603 Sum_probs=12.2
Q ss_pred eccCCCEEEeCCCCc
Q 045997 24 SVKEGDTVLLPEYGG 38 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g 38 (63)
.+++||+|++-.|+-
T Consensus 52 l~~~GD~vII~aY~~ 66 (97)
T 1uhe_A 52 KVAIGDVVIILAYAS 66 (97)
T ss_dssp GCCTTCEEEEEEEEE
T ss_pred cCCCCCEEEEEECcc
Confidence 589999999877653
No 176
>1y3t_A Hypothetical protein YXAG; BI cupin, dioxygenase, oxidoreductase; 2.40A {Bacillus subtilis} SCOP: b.82.1.5 PDB: 2h0v_A*
Probab=25.49 E-value=98 Score=19.83 Aligned_cols=23 Identities=17% Similarity=0.329 Sum_probs=18.1
Q ss_pred eeeccCCCEEEeCCCCceEEEEC
Q 045997 22 PVSVKEGDTVLLPEYGGAEVKLG 44 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~g~ev~~~ 44 (63)
...+++||.++++......+...
T Consensus 258 ~~~l~~GD~~~ip~~~~H~~~n~ 280 (337)
T 1y3t_A 258 EIQLNPGDFLHVPANTVHSYRLD 280 (337)
T ss_dssp EEEECTTCEEEECTTCCEEEEEC
T ss_pred EEEECCCCEEEECCCCeEEEEEC
Confidence 46889999999998877666654
No 177
>2pbd_P Profilin-1, profilin I; ternary complex, profilin, actin, poly-proline, loading poly-Pro site, GAB domain, structural protein; HET: HIC ATP; 1.50A {Homo sapiens} SCOP: d.110.1.1 PDB: 1fik_A 1cjf_A 1pfl_A 1fil_A* 2pav_P* 3chw_P* 1awi_A 1cf0_A* 1pne_A 1hlu_P 2btf_P* 3u4l_P* 3ub5_P*
Probab=25.41 E-value=55 Score=19.52 Aligned_cols=15 Identities=27% Similarity=0.483 Sum_probs=13.4
Q ss_pred eEEEECCEEEEEEec
Q 045997 39 AEVKLGDKKYHLYED 53 (63)
Q Consensus 39 ~ev~~~g~~y~i~~e 53 (63)
+=+.++|++|+++|.
T Consensus 61 ~Gl~lgG~Ky~~ir~ 75 (139)
T 2pbd_P 61 NGLTLGGQKCSVIRD 75 (139)
T ss_dssp HCEEETTEEEEEEEE
T ss_pred cCeEECCEEEEEEec
Confidence 448999999999998
No 178
>1paz_A Pseudoazurin precursor; electron transfer(cuproprotein); 1.55A {Alcaligenes faecalis} SCOP: b.6.1.1 PDB: 1pza_A 1pzb_A 1pzc_A 2p80_D 3nyk_A 3paz_A 8paz_A 4paz_A 5paz_A 6paz_A 7paz_A 1py0_A*
Probab=25.31 E-value=34 Score=19.83 Aligned_cols=13 Identities=31% Similarity=0.473 Sum_probs=10.7
Q ss_pred eeccCCCEEEeCC
Q 045997 23 VSVKEGDTVLLPE 35 (63)
Q Consensus 23 ~~vk~GD~Vl~~~ 35 (63)
+.|++||+|.|..
T Consensus 23 i~V~~GdtV~f~~ 35 (123)
T 1paz_A 23 IKANPGDTVTFIP 35 (123)
T ss_dssp EEECTTCEEEEEE
T ss_pred EEECCCCEEEEEE
Confidence 4889999999854
No 179
>1pmy_A Pseudoazurin; electron transfer(cuproprotein); 1.50A {Methylobacterium extorquens} SCOP: b.6.1.1
Probab=25.17 E-value=35 Score=19.81 Aligned_cols=14 Identities=29% Similarity=0.449 Sum_probs=11.2
Q ss_pred eeccCCCEEEeCCC
Q 045997 23 VSVKEGDTVLLPEY 36 (63)
Q Consensus 23 ~~vk~GD~Vl~~~y 36 (63)
+.|++||+|.|...
T Consensus 23 i~V~~GdtV~f~n~ 36 (123)
T 1pmy_A 23 VRLKPGDSIKFLPT 36 (123)
T ss_dssp EEECTTCEEEEECS
T ss_pred EEECCCCEEEEEEC
Confidence 48899999998543
No 180
>1vc3_B L-aspartate-alpha-decarboxylase heavy chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_B
Probab=25.02 E-value=17 Score=21.32 Aligned_cols=14 Identities=57% Similarity=0.876 Sum_probs=11.7
Q ss_pred eccCCCEEEeCCCC
Q 045997 24 SVKEGDTVLLPEYG 37 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~ 37 (63)
.+++||+|++-.|+
T Consensus 54 l~~~GD~vII~aY~ 67 (96)
T 1vc3_B 54 LVKPGDLVILVAYG 67 (96)
T ss_dssp TCCTTCEEEEEEEE
T ss_pred cCCCCCEEEEEECc
Confidence 68999999987664
No 181
>1knw_A Diaminopimelate decarboxylase; pyridoxal-phosphate, decarboxylation, lysin barrel, lyase; HET: PLP MES; 2.10A {Escherichia coli} SCOP: b.49.2.3 c.1.6.1 PDB: 1ko0_A*
Probab=24.74 E-value=1.3e+02 Score=20.48 Aligned_cols=12 Identities=42% Similarity=0.706 Sum_probs=10.6
Q ss_pred eccCCCEEEeCC
Q 045997 24 SVKEGDTVLLPE 35 (63)
Q Consensus 24 ~vk~GD~Vl~~~ 35 (63)
.+++||.|.|..
T Consensus 363 ~~~~GD~l~~~~ 374 (425)
T 1knw_A 363 EVKAGDYLVLHD 374 (425)
T ss_dssp CCCTTCEEEEES
T ss_pred CCCCCCEEEEeC
Confidence 699999999955
No 182
>3udc_A Small-conductance mechanosensitive channel, C-TER peptide from small-conductance...; membrane protein; 3.35A {Thermoanaerobacter tengcongensis} PDB: 3t9n_A*
Probab=24.72 E-value=1.3e+02 Score=19.56 Aligned_cols=20 Identities=20% Similarity=0.305 Sum_probs=15.6
Q ss_pred eccCCCEEEeCCCCceEEEE
Q 045997 24 SVKEGDTVLLPEYGGAEVKL 43 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g~ev~~ 43 (63)
++++||.|.+..+.|+-.++
T Consensus 128 pf~vGD~I~i~~~~G~V~~I 147 (285)
T 3udc_A 128 QFSVGDYVTINGISGTVEEI 147 (285)
T ss_dssp SCCTTCEEEETTEEEEEEEE
T ss_pred CccCCCEEEECCEEEEEEEe
Confidence 68999999998888754433
No 183
>2rdq_A 1-deoxypentalenic acid 11-beta hydroxylase; Fe(II ketoglutarate dependent hydroxylase...; double stranded barrel helix, dioxygenase; HET: AKG; 1.31A {Streptomyces avermitilis} PDB: 2rdn_A* 2rdr_A* 2rds_A*
Probab=24.67 E-value=45 Score=21.14 Aligned_cols=20 Identities=15% Similarity=0.378 Sum_probs=16.4
Q ss_pred CCeEEeeeccCCCEEEeCCC
Q 045997 17 NGKFIPVSVKEGDTVLLPEY 36 (63)
Q Consensus 17 ~G~~~p~~vk~GD~Vl~~~y 36 (63)
+...++..+++||.++|..+
T Consensus 207 ~~~~v~~~~~aGdv~lf~~~ 226 (288)
T 2rdq_A 207 DEHLLHSPMEPGDILLFHAH 226 (288)
T ss_dssp TSCEECCCCCTTCEEEEETT
T ss_pred cCceeecccCCCCEEEEeCC
Confidence 34568889999999999774
No 184
>1hr0_W Translation initiation factor; ribosomal subunit, ribosome, IF1; 3.20A {Escherichia coli} SCOP: b.40.4.5 PDB: 1zo1_W
Probab=24.62 E-value=32 Score=18.24 Aligned_cols=14 Identities=21% Similarity=0.392 Sum_probs=10.3
Q ss_pred eeccCCCEEEeCCC
Q 045997 23 VSVKEGDTVLLPEY 36 (63)
Q Consensus 23 ~~vk~GD~Vl~~~y 36 (63)
..+.+||.|++...
T Consensus 45 i~i~~GD~V~ve~~ 58 (71)
T 1hr0_W 45 IRILPGDRVVVEIT 58 (71)
T ss_dssp CCCCTTCEEEEECC
T ss_pred cCCCCCCEEEEEEE
Confidence 34559999999653
No 185
>1f56_A Plantacyanin; cupredoxin, copper protein, beta barrel, plant protein; 2.05A {Spinacia oleracea} SCOP: b.6.1.1
Probab=24.47 E-value=31 Score=19.27 Aligned_cols=14 Identities=21% Similarity=0.401 Sum_probs=11.2
Q ss_pred eccCCCEEEeCCCC
Q 045997 24 SVKEGDTVLLPEYG 37 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~ 37 (63)
..++||+++|.=.+
T Consensus 18 ~f~vGD~L~F~y~~ 31 (91)
T 1f56_A 18 SFRAGDVLVFKYIK 31 (91)
T ss_dssp CBCTTCEEEEECCB
T ss_pred cEeCCCEEEEEccC
Confidence 68999999996443
No 186
>2a1x_A Phytanoyl-COA dioxygenase; beta jelly roll, double-stranded beta-helix, structural GENO structural genomics consortium, SGC, oxidoreductase; HET: AKG; 2.50A {Homo sapiens} SCOP: b.82.2.9
Probab=24.41 E-value=56 Score=21.04 Aligned_cols=19 Identities=21% Similarity=0.382 Sum_probs=16.1
Q ss_pred CeEEeeeccCCCEEEeCCC
Q 045997 18 GKFIPVSVKEGDTVLLPEY 36 (63)
Q Consensus 18 G~~~p~~vk~GD~Vl~~~y 36 (63)
...+++.+++||.++|...
T Consensus 213 ~~~v~~~~~aGd~vlf~~~ 231 (308)
T 2a1x_A 213 KARVHLVMEKGDTVFFHPL 231 (308)
T ss_dssp SCCEEECBCTTCEEEECTT
T ss_pred CCeEEccCCCccEEEECCC
Confidence 4668899999999999773
No 187
>1kdj_A Plastocyanin; electron transfer, photosystem, PAI-PAI stacking; 1.70A {Adiantum capillus-veneris} SCOP: b.6.1.1 PDB: 1kdi_A 2bz7_A 2bzc_A
Probab=24.33 E-value=31 Score=18.52 Aligned_cols=28 Identities=36% Similarity=0.385 Sum_probs=17.0
Q ss_pred EEECCCeeCCCCeEEee--eccCCCEEEeCCC
Q 045997 7 VAVGPGARDVNGKFIPV--SVKEGDTVLLPEY 36 (63)
Q Consensus 7 vAVG~G~~~~~G~~~p~--~vk~GD~Vl~~~y 36 (63)
|.+|+. ..+-.+.|. .|++||+|.|...
T Consensus 3 V~~g~~--~~~~~F~P~~i~v~~G~tV~~~n~ 32 (102)
T 1kdj_A 3 VEVGDE--VGNFKFYPDSITVSAGEAVEFTLV 32 (102)
T ss_dssp EEESCT--TCCCCEESSEEEECTTCCEEEEEC
T ss_pred EEEecC--CCccEEeCCEEEECCCCEEEEEEC
Confidence 556652 112244444 7899999998643
No 188
>3dwg_C 9.5 kDa culture filtrate antigen CFP10A; sulfur carrier protein complex, beta-grAsp fold, amino-acid biosynthesis; HET: PLP; 1.53A {Mycobacterium tuberculosis} PDB: 3dwm_A
Probab=24.12 E-value=40 Score=18.20 Aligned_cols=16 Identities=31% Similarity=0.787 Sum_probs=10.5
Q ss_pred eeccCCCEEEe-CCCCc
Q 045997 23 VSVKEGDTVLL-PEYGG 38 (63)
Q Consensus 23 ~~vk~GD~Vl~-~~y~g 38 (63)
..++.||.|.| |..+|
T Consensus 76 ~~L~~gDeV~i~Ppv~G 92 (93)
T 3dwg_C 76 TAIADGDSVTILPAVAG 92 (93)
T ss_dssp CBCCTTCEEEEEECCTT
T ss_pred cCCCCCCEEEEECCCCC
Confidence 36888997765 44544
No 189
>3a5z_B EF-P, elongation factor P; aminoacyl-tRNA synthetase paralog, translation, tRNA, lysyl- synthetase, structural genomics, NPPSFA; HET: KAA; 2.50A {Escherichia coli}
Probab=23.97 E-value=61 Score=20.62 Aligned_cols=39 Identities=13% Similarity=0.209 Sum_probs=29.3
Q ss_pred CCCeEEeeeccCCCEEEeCCCCceEEE---ECCEEEEEEecC
Q 045997 16 VNGKFIPVSVKEGDTVLLPEYGGAEVK---LGDKKYHLYEDE 54 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~y~g~ev~---~~g~~y~i~~e~ 54 (63)
.+|.......+.||++--..-.-.+.+ .||..|.||..+
T Consensus 50 ~TG~~~e~tf~s~~kve~~~ver~~~qylY~dgd~~~FMD~e 91 (191)
T 3a5z_B 50 LTGTRVEKTFKSTDSAEGADVVDMNLTYLYNDGEFWHFMNNE 91 (191)
T ss_dssp GGTEEEEEEEETTCEEEECCEEEECCEEEEECSSCEEEECTT
T ss_pred CCCCEEEEEECCCCEEEeeEEEEEEEEEEEeCCCEEEEeeCC
Confidence 588888889999999987765544333 378889988765
No 190
>3tre_A EF-P, elongation factor P; protein synthesis, translation; 2.90A {Coxiella burnetii}
Probab=23.74 E-value=93 Score=19.71 Aligned_cols=39 Identities=18% Similarity=0.362 Sum_probs=30.2
Q ss_pred CCCeEEeeeccCCCEEEeCCCCceEEEE---CCEEEEEEecC
Q 045997 16 VNGKFIPVSVKEGDTVLLPEYGGAEVKL---GDKKYHLYEDE 54 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~y~g~ev~~---~g~~y~i~~e~ 54 (63)
.+|.......+.||++--....-.+.++ +|..|+||..+
T Consensus 50 ~tG~~~e~tf~s~ekve~~~ver~~~qylY~dgd~~~FMD~e 91 (191)
T 3tre_A 50 KTGRVLERTFKSGETLPAADVVEVEMQYLYNDGEFWHFMTSE 91 (191)
T ss_dssp TTCCEEEEEEETTCEECBCCEEEEEEEEEEECSSCEEEEESS
T ss_pred CCCCEEEEEeCCCCEEEeceEEEEEEEEEEEcCCcEEEccCC
Confidence 5888888899999998877766555554 78889988864
No 191
>1ryj_A Unknown; beta/alpha protein, structural genomics, protein structure initiative, OCSP, NESG, PSI; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.15.3.2
Probab=23.67 E-value=39 Score=17.57 Aligned_cols=12 Identities=17% Similarity=0.371 Sum_probs=8.9
Q ss_pred eccCCCEEEeCC
Q 045997 24 SVKEGDTVLLPE 35 (63)
Q Consensus 24 ~vk~GD~Vl~~~ 35 (63)
.++.||+|-+-+
T Consensus 54 ~L~~gD~V~ii~ 65 (70)
T 1ryj_A 54 EIFDGDIIEVIR 65 (70)
T ss_dssp BCCTTCEEEEEE
T ss_pred cCCCCCEEEEEe
Confidence 788888886643
No 192
>1dcz_A Transcarboxylase 1.3S subunit; antiparallel beta sheet, hammerhead, biocytin, transferase; NMR {Propionibacterium freudenreichiisubsp} SCOP: b.84.1.1 PDB: 1dd2_A 1o78_A
Probab=23.59 E-value=56 Score=16.57 Aligned_cols=15 Identities=53% Similarity=0.722 Sum_probs=8.4
Q ss_pred CCeEEeeeccCCCEE
Q 045997 17 NGKFIPVSVKEGDTV 31 (63)
Q Consensus 17 ~G~~~p~~vk~GD~V 31 (63)
+|......+++||+|
T Consensus 16 ~G~v~~~~v~~G~~V 30 (77)
T 1dcz_A 16 AGTVSKILVKEGDTV 30 (77)
T ss_dssp SCEEEEECCCTTCEE
T ss_pred CEEEEEEEcCCcCEE
Confidence 455555556666654
No 193
>2if6_A Hypothetical protein YIIX; structural genomics, metalloprotein, PSI-2, PR structure initiative, NEW YORK SGX research center for STRU genomics; 1.80A {Escherichia coli} SCOP: d.3.1.21
Probab=23.53 E-value=34 Score=20.92 Aligned_cols=13 Identities=15% Similarity=0.233 Sum_probs=11.0
Q ss_pred eeccCCCEEEeCC
Q 045997 23 VSVKEGDTVLLPE 35 (63)
Q Consensus 23 ~~vk~GD~Vl~~~ 35 (63)
..+++||.|+|..
T Consensus 3 ~~l~~GDlvf~~~ 15 (186)
T 2if6_A 3 WQPQTGDIIFQIS 15 (186)
T ss_dssp CCCCTTCEEEECC
T ss_pred ccCCCCCEEEEEc
Confidence 3689999999975
No 194
>2l55_A SILB,silver efflux protein, MFP component of the components proton antiporter metal...; APO form, AG(I)-binding site; NMR {Cupriavidus metallidurans}
Probab=23.35 E-value=34 Score=18.84 Aligned_cols=12 Identities=33% Similarity=0.545 Sum_probs=9.9
Q ss_pred eeccCCCEEEeC
Q 045997 23 VSVKEGDTVLLP 34 (63)
Q Consensus 23 ~~vk~GD~Vl~~ 34 (63)
..+|+||+|-|.
T Consensus 46 ~~lk~Gd~V~F~ 57 (82)
T 2l55_A 46 QGLKAGDRVAFS 57 (82)
T ss_dssp SSCSTTCEEEEE
T ss_pred hcCCCCCEEEEE
Confidence 479999999874
No 195
>2cbp_A Cucumber basic protein; electron transport, phytocyanin, type 1 copper protein; 1.80A {Cucumis sativus} SCOP: b.6.1.1
Probab=23.33 E-value=33 Score=19.28 Aligned_cols=14 Identities=21% Similarity=0.347 Sum_probs=11.2
Q ss_pred eccCCCEEEeCCCC
Q 045997 24 SVKEGDTVLLPEYG 37 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~ 37 (63)
.+++||+++|.=.+
T Consensus 23 ~f~vGD~L~F~y~~ 36 (96)
T 2cbp_A 23 RFRAGDILLFNYNP 36 (96)
T ss_dssp CBCTTCEEEEECCT
T ss_pred eEcCCCEEEEEecC
Confidence 69999999996443
No 196
>2q18_X 2-keto-3-deoxy-D-arabinonate dehydratase; FAH-family fold, lyase; 2.10A {Sulfolobus solfataricus} PDB: 2q19_X 2q1a_X 2q1c_X 2q1d_X 3bqb_A
Probab=23.24 E-value=37 Score=22.53 Aligned_cols=29 Identities=17% Similarity=0.315 Sum_probs=18.8
Q ss_pred CceEEEEEECCCeeCCCCeEEeeeccCCCEEEe
Q 045997 1 LISGKVVAVGPGARDVNGKFIPVSVKEGDTVLL 33 (63)
Q Consensus 1 ~~~G~VvAVG~G~~~~~G~~~p~~vk~GD~Vl~ 33 (63)
|..|.||.-|+|.. ..+ +..+++||+|-.
T Consensus 246 L~pGDvI~TGTg~~-p~~---~~~l~~GD~v~~ 274 (293)
T 2q18_X 246 IPDGTILTTGTAIV-PGR---DKGLKDEDIVEI 274 (293)
T ss_dssp CCTTEEEECCCSCC-CCT---TCCCCTTCEEEE
T ss_pred CCCCCEEECCCCCC-CCC---CcccCCCCEEEE
Confidence 34578888888532 111 347899998864
No 197
>2gpr_A Glucose-permease IIA component; phosphotransferase, enzyme IIA; 2.50A {Mycoplasma capricolum} SCOP: b.84.3.1
Probab=23.23 E-value=44 Score=20.58 Aligned_cols=23 Identities=17% Similarity=0.189 Sum_probs=14.5
Q ss_pred CCCeeCCCCeEEeeeccCCCEEE
Q 045997 10 GPGARDVNGKFIPVSVKEGDTVL 32 (63)
Q Consensus 10 G~G~~~~~G~~~p~~vk~GD~Vl 32 (63)
|.+...-+|+.....|+.||+|-
T Consensus 80 GidTv~l~G~gF~~~V~~Gd~V~ 102 (154)
T 2gpr_A 80 GLDTVSLDGNGFESFVTQDQEVN 102 (154)
T ss_dssp SSSGGGGTTCSEEECCCTTCEEC
T ss_pred CcchhhcCCCceEEEEcCCCEEc
Confidence 33333345666667788888875
No 198
>3plx_B Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=23.12 E-value=19 Score=21.30 Aligned_cols=15 Identities=27% Similarity=0.532 Sum_probs=12.7
Q ss_pred eccCCCEEEeCCCCc
Q 045997 24 SVKEGDTVLLPEYGG 38 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g 38 (63)
.+++||+|++-.|+-
T Consensus 53 l~~~GD~vII~aY~~ 67 (102)
T 3plx_B 53 LAEVGDKVIIMSYAD 67 (102)
T ss_dssp GCCTTCEEEEEEEEE
T ss_pred ccCCCCEEEEEEccc
Confidence 689999999987753
No 199
>1f0z_A THis protein; ubiquitin fold, transport protein; NMR {Escherichia coli} SCOP: d.15.3.2 PDB: 1zud_2
Probab=23.07 E-value=26 Score=17.97 Aligned_cols=18 Identities=39% Similarity=0.711 Sum_probs=12.0
Q ss_pred CCeEEee------eccCCCEEEeC
Q 045997 17 NGKFIPV------SVKEGDTVLLP 34 (63)
Q Consensus 17 ~G~~~p~------~vk~GD~Vl~~ 34 (63)
||+++|. .++.||+|-+-
T Consensus 37 N~~~v~~~~~~~~~L~~gD~v~i~ 60 (66)
T 1f0z_A 37 NQQIVPREQWAQHIVQDGDQILLF 60 (66)
T ss_dssp TTEEECHHHHTTCCCCTTEEECEE
T ss_pred CCEECCchhcCCcCCCCCCEEEEE
Confidence 4556553 68888888653
No 200
>2k5p_A THis protein, thiamine-biosynthesis protein; NESG, GMR137, structural genomics, PSI-2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 3cwi_A
Probab=23.03 E-value=31 Score=18.68 Aligned_cols=20 Identities=35% Similarity=0.624 Sum_probs=13.9
Q ss_pred CCeEEee------eccCCCEEEeCCC
Q 045997 17 NGKFIPV------SVKEGDTVLLPEY 36 (63)
Q Consensus 17 ~G~~~p~------~vk~GD~Vl~~~y 36 (63)
||+++|. .++.||+|-+-.+
T Consensus 40 Ng~iVpr~~~~~~~L~dGD~IEIv~~ 65 (78)
T 2k5p_A 40 NGEVLEREAFDATTVKDGDAVEFLYF 65 (78)
T ss_dssp TTEECCTTHHHHCEECSSBCEEECCC
T ss_pred CCEECChHHcCcccCCCCCEEEEEee
Confidence 5566555 4889998877654
No 201
>2opw_A Phyhd1 protein; double-stranded beta helix, oxygenase, structural GE structural genomics consortium, SGC, oxidoreductase; 1.90A {Homo sapiens} PDB: 3obz_A*
Probab=22.93 E-value=43 Score=21.28 Aligned_cols=18 Identities=33% Similarity=0.591 Sum_probs=15.5
Q ss_pred eEEeeeccCCCEEEeCCC
Q 045997 19 KFIPVSVKEGDTVLLPEY 36 (63)
Q Consensus 19 ~~~p~~vk~GD~Vl~~~y 36 (63)
..+++.+++||.++|...
T Consensus 226 ~~v~~~~~aGd~~~f~~~ 243 (291)
T 2opw_A 226 LFVPTPVQRGALVLIHGE 243 (291)
T ss_dssp GCEEECBCTTCEEEEETT
T ss_pred CeeecccCCCcEEEEcCC
Confidence 567889999999999774
No 202
>1byp_A Protein (plastocyanin); electron transfer, photosynthesis, acidic patch, double mutant, electron transport; 1.75A {Silene latifolia subsp} SCOP: b.6.1.1 PDB: 1pla_A 1plb_A
Probab=22.88 E-value=32 Score=18.35 Aligned_cols=18 Identities=22% Similarity=0.672 Sum_probs=13.1
Q ss_pred eEEe--eeccCCCEEEeCCC
Q 045997 19 KFIP--VSVKEGDTVLLPEY 36 (63)
Q Consensus 19 ~~~p--~~vk~GD~Vl~~~y 36 (63)
.+.| +.|++||+|.|...
T Consensus 13 ~F~P~~i~v~~G~tV~~~n~ 32 (99)
T 1byp_A 13 AFVPSDLSIASGEKITFKNN 32 (99)
T ss_dssp SEESSEEEECTTEEEEEEEC
T ss_pred eEeCCEEEECCCCEEEEEEC
Confidence 4555 47899999998543
No 203
>3pbi_A Invasion protein; peptidoglycan hydrolase, extracellular, invasion related Pro cell WALL, NLPC-like module, hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 3i86_A
Probab=22.82 E-value=46 Score=21.48 Aligned_cols=19 Identities=26% Similarity=0.609 Sum_probs=14.1
Q ss_pred CCeEEee-eccCCCEEEeCC
Q 045997 17 NGKFIPV-SVKEGDTVLLPE 35 (63)
Q Consensus 17 ~G~~~p~-~vk~GD~Vl~~~ 35 (63)
.|..++. ++++||.|+|..
T Consensus 150 ~g~~V~~~~lqpGDLVff~~ 169 (214)
T 3pbi_A 150 AGRHVPPAEAKRGDLIFYGP 169 (214)
T ss_dssp SSEEECGGGCCTTCEEEESG
T ss_pred cCeeechhhCCCCCEEEecC
Confidence 3455554 799999999964
No 204
>1id2_A Amicyanin; beta barrel, type-1 blue copper protein, electron transfer protein, electron transport; 2.15A {Paracoccus versutus} SCOP: b.6.1.1
Probab=22.81 E-value=42 Score=18.53 Aligned_cols=14 Identities=36% Similarity=0.496 Sum_probs=11.3
Q ss_pred eeccCCCEEEeCCC
Q 045997 23 VSVKEGDTVLLPEY 36 (63)
Q Consensus 23 ~~vk~GD~Vl~~~y 36 (63)
+.|++||+|.|...
T Consensus 36 i~V~~G~tV~~~N~ 49 (106)
T 1id2_A 36 VTIKAGETVYWVNG 49 (106)
T ss_dssp EEECTTCEEEEEEC
T ss_pred EEECCCCEEEEEEC
Confidence 48999999998643
No 205
>3crk_C Dihydrolipoyllysine-residue acetyltransferase COM pyruvate dehydrogenase complex,...; pyruvate dehydrogenase kinase isozyme 2, glucos metabolism; HET: LA2; 2.30A {Homo sapiens} PDB: 3crl_C*
Probab=22.78 E-value=37 Score=18.15 Aligned_cols=16 Identities=19% Similarity=0.214 Sum_probs=9.9
Q ss_pred CCCeEEeeeccCCCEE
Q 045997 16 VNGKFIPVSVKEGDTV 31 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~V 31 (63)
..|......+++||+|
T Consensus 18 ~~G~v~~~~v~~Gd~V 33 (87)
T 3crk_C 18 TMGTVQRWEKKVGEKL 33 (87)
T ss_dssp CEEEEEEECSCTTCEE
T ss_pred CcEEEEEEEcCCCCEE
Confidence 3556666666677664
No 206
>2hc8_A PACS, cation-transporting ATPase, P-type; copper, COPA, COPB, actuator, transport protein; 1.65A {Archaeoglobus fulgidus} PDB: 2voy_F
Probab=22.76 E-value=52 Score=18.78 Aligned_cols=23 Identities=30% Similarity=0.559 Sum_probs=17.7
Q ss_pred CCeEEeeeccCCCEEEeCCCCceEEEE
Q 045997 17 NGKFIPVSVKEGDTVLLPEYGGAEVKL 43 (63)
Q Consensus 17 ~G~~~p~~vk~GD~Vl~~~y~g~ev~~ 43 (63)
+|+-.|..-++||.| |+|+-+.-
T Consensus 63 TGEs~pv~k~~g~~v----~aGt~~~~ 85 (113)
T 2hc8_A 63 SGEPVPVLKSKGDEV----FGATINNT 85 (113)
T ss_dssp HCCSSCEEECTTCEE----CTTCEECS
T ss_pred CCCCccEEECCCCEE----EeCCEEee
Confidence 788889999999986 56766543
No 207
>3aqy_A Beta-1,3-glucan-binding protein; beta-sandwich, immune receptor, sugar bindi protein; 1.58A {Plodia interpunctella} PDB: 3aqz_A* 3aqx_A* 2rqe_A
Probab=22.72 E-value=70 Score=18.48 Aligned_cols=26 Identities=27% Similarity=0.312 Sum_probs=17.3
Q ss_pred eeeccCCCEEEeCCCCceEEEECCEEEEEE
Q 045997 22 PVSVKEGDTVLLPEYGGAEVKLGDKKYHLY 51 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~g~ev~~~g~~y~i~ 51 (63)
...+|+||++.|-=| +..+|..|...
T Consensus 66 ~~~lk~GD~i~Yw~~----V~~~g~~y~~~ 91 (106)
T 3aqy_A 66 NVKLKLGDKIYFWTY----VIKDGLGYRQD 91 (106)
T ss_dssp SCCCCTTCEEEEEEE----EEETTEEEEEE
T ss_pred ceEeCCCCEEEEEEE----EEECCCceEec
Confidence 458999999998654 34555555433
No 208
>2ov0_A Amicyanin; beta-sandwich, electron transport; 0.75A {Paracoccus denitrificans} SCOP: b.6.1.1 PDB: 1aaj_A 1aan_A 1aac_A 1mg2_C* 1mg3_C* 1t5k_A 2gc4_C* 2gc7_C* 2j55_A* 2j56_A* 2j57_A* 2mta_A* 1bxa_A 2rac_A 3l45_A 3ie9_A 3iea_A 2idq_A 2ids_A 1sf3_A ...
Probab=22.65 E-value=43 Score=18.38 Aligned_cols=14 Identities=43% Similarity=0.430 Sum_probs=11.2
Q ss_pred eeccCCCEEEeCCC
Q 045997 23 VSVKEGDTVLLPEY 36 (63)
Q Consensus 23 ~~vk~GD~Vl~~~y 36 (63)
+.|++||+|.|...
T Consensus 35 i~v~~Gd~V~~~N~ 48 (105)
T 2ov0_A 35 LHVKVGDTVTWINR 48 (105)
T ss_dssp EEECTTCEEEEEEC
T ss_pred EEECCCCEEEEEEC
Confidence 48899999998543
No 209
>2pyt_A Ethanolamine utilization protein EUTQ; structural genomics, joint center for structural genomics, J protein structure initiative; 1.90A {Salmonella typhimurium LT2} SCOP: b.82.1.24
Probab=22.45 E-value=57 Score=18.94 Aligned_cols=16 Identities=25% Similarity=0.544 Sum_probs=13.4
Q ss_pred eeeccCCCEEEeCCCC
Q 045997 22 PVSVKEGDTVLLPEYG 37 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~ 37 (63)
+..+++||.+.|+.-.
T Consensus 94 ~~~l~~GD~i~~p~g~ 109 (133)
T 2pyt_A 94 TMIAKAGDVMFIPKGS 109 (133)
T ss_dssp EEEEETTCEEEECTTC
T ss_pred EEEECCCcEEEECCCC
Confidence 3589999999999854
No 210
>3awu_B MELC; tyrosinase, binary complex, type-3 copper, copper transfer, oxidoreductase-metal transport complex; 1.16A {Streptomyces castaneoglobisporus} PDB: 3awt_B 3aws_B 3awv_B 3aww_B 3ax0_B 3awy_B 3awz_B 3awx_B 1wxc_B 1wx2_B 1wx4_B 1wx5_B 1wx3_B 2ahk_B 2ahl_B 2zmx_B 2zmy_B 2zmz_B 2zwd_B 2zwe_B* ...
Probab=22.36 E-value=78 Score=19.49 Aligned_cols=19 Identities=26% Similarity=0.478 Sum_probs=16.4
Q ss_pred CceEEEECCEEEEEEecCC
Q 045997 37 GGAEVKLGDKKYHLYEDES 55 (63)
Q Consensus 37 ~g~ev~~~g~~y~i~~e~D 55 (63)
.+.+|.+||.+..+|+..|
T Consensus 70 ~~~~V~IDGRpLhvMr~Ad 88 (134)
T 3awu_B 70 GGYEVFVDGVQLHVMRNAD 88 (134)
T ss_dssp CSEEEEETTEEECEEECTT
T ss_pred CceEEEecCeecceeeccC
Confidence 3578999999999999876
No 211
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=22.32 E-value=53 Score=19.09 Aligned_cols=11 Identities=27% Similarity=0.456 Sum_probs=7.5
Q ss_pred eccCCCEEEeC
Q 045997 24 SVKEGDTVLLP 34 (63)
Q Consensus 24 ~vk~GD~Vl~~ 34 (63)
.++.||+|.+.
T Consensus 42 ~~~~gd~V~v~ 52 (133)
T 2y78_A 42 EARAGQTVSVH 52 (133)
T ss_dssp BCCTTSEEEEE
T ss_pred CCCCCCEEEEE
Confidence 46778887653
No 212
>2gbs_A Hypothetical protein RPA0253; alpha-beta, RPR3, NESG, structural genomics, COG294 protein structure initiative; NMR {Rhodopseudomonas palustris} SCOP: b.122.1.8
Probab=22.09 E-value=32 Score=21.29 Aligned_cols=12 Identities=17% Similarity=0.454 Sum_probs=10.1
Q ss_pred eccCCCEEEeCC
Q 045997 24 SVKEGDTVLLPE 35 (63)
Q Consensus 24 ~vk~GD~Vl~~~ 35 (63)
..|+||.++|=.
T Consensus 42 ~Mk~GD~~ffYH 53 (145)
T 2gbs_A 42 AMRRGDRAFYYH 53 (145)
T ss_dssp HCCTTCEEEEEE
T ss_pred hcCCCCEEEEEE
Confidence 599999999943
No 213
>2eif_A IF-5A, protein (eukaryotic translation initiation factor; EIF-5A, OB-fold, structural genomics, BSGC STRU funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: b.34.5.2 b.40.4.5 PDB: 1eif_A
Probab=22.04 E-value=1.2e+02 Score=17.99 Aligned_cols=39 Identities=5% Similarity=-0.015 Sum_probs=26.3
Q ss_pred CCCeEEeeeccCCCEEEeCCCCceEEE---ECCEEEEEEecC
Q 045997 16 VNGKFIPVSVKEGDTVLLPEYGGAEVK---LGDKKYHLYEDE 54 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~y~g~ev~---~~g~~y~i~~e~ 54 (63)
.+|.......+.||++--+...-.+.+ .||..|.||..+
T Consensus 55 ~tG~~~e~tf~s~~~ve~~~ve~~~~qyly~dg~~~~fMD~e 96 (136)
T 2eif_A 55 FEKVKKEFVAPTSSKVEVPIIDRRKGQVLAIMGDMVQIMDLQ 96 (136)
T ss_dssp SSCCEEEEEEETTSEEEEECEEEEEEEEEEEETTEEEEEETT
T ss_pred CCCCeEEEEecCCCEeccccEeeeEEEEEEecCCEEEEEeCC
Confidence 577777778888888776655444443 267777777655
No 214
>1ou8_A Stringent starvation protein B homolog; peptide-binding pocket, protein-peptide complex, homodimer, transport protein; 1.60A {Haemophilus influenzae} SCOP: b.136.1.1 PDB: 1zsz_A 1twb_A 1zsz_B
Probab=22.03 E-value=1.3e+02 Score=17.78 Aligned_cols=45 Identities=24% Similarity=0.322 Sum_probs=31.6
Q ss_pred CCeEEee-eccCCCEEE-eCCCCceEEEECCE------------EEEEEecCCEEEEec
Q 045997 17 NGKFIPV-SVKEGDTVL-LPEYGGAEVKLGDK------------KYHLYEDESILGTLH 61 (63)
Q Consensus 17 ~G~~~p~-~vk~GD~Vl-~~~y~g~ev~~~g~------------~y~i~~e~DIla~i~ 61 (63)
.|..+|. .|+-|..|| ++..+-..+.++++ ..+.+....|+|+..
T Consensus 36 ~~v~VP~~~v~dGqIvLNIsp~Av~~L~i~nd~isF~ARFgGv~~~i~VP~~AV~aIyA 94 (111)
T 1ou8_A 36 LGVNVPVEYVKDGQIVLNLSASATGNLQLTNDFIQFNARFKGVSRELYIPMGAALAIYA 94 (111)
T ss_dssp TTCBCCGGGCBTTEEEEECSTTTCEEEEECSSEEEEEEEETTEEEEEEEEGGGEEEEEE
T ss_pred CCCcCCHHHhcCCEEEEECChhhhcCeEEeccEEEEEEEECCEeEEEEEehHhheEeee
Confidence 3566777 788888888 67666555555433 556788888888875
No 215
>1ws8_A Mavicyanin; oxidized form, phytocyanin, cupredoxin, electron transport; 1.60A {Cucurbita pepo} SCOP: b.6.1.1 PDB: 1ws7_A
Probab=21.99 E-value=36 Score=19.63 Aligned_cols=15 Identities=20% Similarity=0.308 Sum_probs=11.5
Q ss_pred eccCCCEEEeCCCCc
Q 045997 24 SVKEGDTVLLPEYGG 38 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g 38 (63)
.+++||+++|.=..+
T Consensus 29 ~F~vGD~LvF~y~~~ 43 (109)
T 1ws8_A 29 KFHVGDSLLFNYNNK 43 (109)
T ss_dssp CBCTTCEEEEECCTT
T ss_pred cCcCCCEEEEeecCC
Confidence 699999999964333
No 216
>1x9u_A Umecyanin; cupredoxin, phytocyanin, copper binding site, beta barrel, electron transport; 1.80A {Armoracia rusticana} PDB: 1x9r_A
Probab=21.99 E-value=38 Score=19.77 Aligned_cols=14 Identities=14% Similarity=0.199 Sum_probs=11.1
Q ss_pred eccCCCEEEeCCCC
Q 045997 24 SVKEGDTVLLPEYG 37 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~ 37 (63)
.+++||+++|.=..
T Consensus 29 ~f~vGD~L~F~y~~ 42 (116)
T 1x9u_A 29 TFRVGDELEFDFAA 42 (116)
T ss_dssp CEETTCEEEECCCT
T ss_pred cCcCCCEEEEEecC
Confidence 68999999996443
No 217
>2c45_A Aspartate 1-decarboxylase precursor; double-PSI beta barrel, lyase, zymogen, pantothenate biosynthesis, pyruvate; 2.99A {Mycobacterium tuberculosis}
Probab=21.98 E-value=32 Score=21.38 Aligned_cols=15 Identities=40% Similarity=0.583 Sum_probs=12.8
Q ss_pred eccCCCEEEeCCCCc
Q 045997 24 SVKEGDTVLLPEYGG 38 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g 38 (63)
.+++||+|++-.|+-
T Consensus 78 l~~~GD~vII~aYa~ 92 (139)
T 2c45_A 78 LVHPGDLVILIAYAT 92 (139)
T ss_dssp TSCTTCEEEEEECCE
T ss_pred cCCCCCEEEEEECCc
Confidence 689999999988764
No 218
>3d82_A Cupin 2, conserved barrel domain protein; structural genomics, joint center for structural genomics; 2.05A {Shewanella frigidimarina ncimb 400}
Probab=21.77 E-value=94 Score=15.91 Aligned_cols=22 Identities=9% Similarity=0.243 Sum_probs=15.3
Q ss_pred eeeccCCCEEEeCCCCceEEEE
Q 045997 22 PVSVKEGDTVLLPEYGGAEVKL 43 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~g~ev~~ 43 (63)
...+++||.++++...--.+..
T Consensus 69 ~~~l~~Gd~~~ip~~~~H~~~~ 90 (102)
T 3d82_A 69 NITLQAGEMYVIPKGVEHKPMA 90 (102)
T ss_dssp EEEEETTEEEEECTTCCBEEEE
T ss_pred EEEEcCCCEEEECCCCeEeeEc
Confidence 3578899999998865444443
No 219
>2jkg_A Profilin; proline-rich ligand, protein-binding, malaria, cytoskeleton; 1.89A {Plasmodium falciparum} PDB: 2jkf_A
Probab=21.76 E-value=83 Score=20.13 Aligned_cols=20 Identities=35% Similarity=0.518 Sum_probs=16.3
Q ss_pred CCceEEEECCEEEEEEecC-C
Q 045997 36 YGGAEVKLGDKKYHLYEDE-S 55 (63)
Q Consensus 36 y~g~ev~~~g~~y~i~~e~-D 55 (63)
++.+=|.++|++|.++|.+ |
T Consensus 89 ~~~~Gv~lgG~KY~~i~~d~d 109 (179)
T 2jkg_A 89 YAPDGVWLGGTKYQFINIERD 109 (179)
T ss_dssp CCTTCEEETTEEEEEEEEEEE
T ss_pred CCCCCEEECCEEEEEEEecCC
Confidence 4445689999999999987 5
No 220
>2in0_A Endonuclease PI-MTUI; hydrolase; 1.60A {Mycobacterium tuberculosis} PDB: 2l8l_A 2in9_A 2in8_A 3ifj_A 3igd_A
Probab=21.69 E-value=63 Score=18.53 Aligned_cols=22 Identities=18% Similarity=0.222 Sum_probs=15.5
Q ss_pred CCeEEeeeccCCCEEEeCCCCc
Q 045997 17 NGKFIPVSVKEGDTVLLPEYGG 38 (63)
Q Consensus 17 ~G~~~p~~vk~GD~Vl~~~y~g 38 (63)
+|-.....+++||+|..++...
T Consensus 79 ~gw~~a~~L~~Gd~v~~~~~~~ 100 (139)
T 2in0_A 79 YGWRAAGELRKGDRVAVRDVET 100 (139)
T ss_dssp TEEEEGGGCCTTCEEEEECTTT
T ss_pred CCcEEHHHCCCCCEEEeCCCcc
Confidence 4433444899999999987644
No 221
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=21.62 E-value=49 Score=17.88 Aligned_cols=17 Identities=18% Similarity=0.466 Sum_probs=12.8
Q ss_pred CCeEEe--eeccCCCEEEe
Q 045997 17 NGKFIP--VSVKEGDTVLL 33 (63)
Q Consensus 17 ~G~~~p--~~vk~GD~Vl~ 33 (63)
+..+.| +.|++||+|.|
T Consensus 22 ~~~F~P~~i~v~~G~tV~~ 40 (100)
T 4hci_A 22 DDYFNPNVITIPINESTTL 40 (100)
T ss_dssp TTEEESSEEEECTTSCEEE
T ss_pred CCEEeCCEEEECCCCEEEE
Confidence 445655 58999999977
No 222
>1o9y_A HRCQ2; secretory protein, HRP, type III secretion system, phytopathogenicity; 2.29A {Pseudomonas syringae} SCOP: b.139.1.1
Probab=21.57 E-value=63 Score=17.57 Aligned_cols=23 Identities=9% Similarity=0.221 Sum_probs=15.7
Q ss_pred eccCCCEEEeCCCCceE--EEECCE
Q 045997 24 SVKEGDTVLLPEYGGAE--VKLGDK 46 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~g~e--v~~~g~ 46 (63)
.+++||.+-+.+..+.. +.++|.
T Consensus 35 ~L~~GdVi~Ld~~~~e~v~i~vng~ 59 (84)
T 1o9y_A 35 RLDAGTILEVTGISPGHATLCHGEQ 59 (84)
T ss_dssp TCCTTCEEEECSSCTTEEEEEETTE
T ss_pred cCCCCCEEEeCCCCCCCEEEEECCE
Confidence 57888888888765544 445766
No 223
>3vab_A Diaminopimelate decarboxylase 1; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: LLP; 2.10A {Brucella melitensis BV}
Probab=21.44 E-value=1.3e+02 Score=20.82 Aligned_cols=12 Identities=17% Similarity=0.249 Sum_probs=10.6
Q ss_pred eccCCCEEEeCC
Q 045997 24 SVKEGDTVLLPE 35 (63)
Q Consensus 24 ~vk~GD~Vl~~~ 35 (63)
.+++||.++|..
T Consensus 382 ~l~~GD~l~~~~ 393 (443)
T 3vab_A 382 KPAPGDLIAICT 393 (443)
T ss_dssp CCCTTCEEEEES
T ss_pred CCCCCCEEEEeC
Confidence 699999999965
No 224
>3r8s_R 50S ribosomal protein L21; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 1vs8_R 1vs6_R 2aw4_R 2awb_R 1vt2_R 2i2v_R 2j28_R 2i2t_R* 2qao_R* 2qba_R* 2qbc_R* 2qbe_R 2qbg_R 2qbi_R* 2qbk_R* 2qov_R 2qox_R 2qoz_R* 2qp1_R* 2rdo_R ...
Probab=21.37 E-value=1.3e+02 Score=17.32 Aligned_cols=22 Identities=36% Similarity=0.505 Sum_probs=14.6
Q ss_pred eeccCCCEEEeCCC---CceEEEEC
Q 045997 23 VSVKEGDTVLLPEY---GGAEVKLG 44 (63)
Q Consensus 23 ~~vk~GD~Vl~~~y---~g~ev~~~ 44 (63)
.-|++||.+..++. .|.+|.++
T Consensus 12 ykV~~Gd~i~vekl~~~~G~~v~~~ 36 (103)
T 3r8s_R 12 HRVSEGQTVRLEKLDIATGETVEFA 36 (103)
T ss_dssp EEEETTCEEEESCCCSCTTCEEEEC
T ss_pred EEEeCCCEEEECCcCCCCCCEEEEe
Confidence 46777777777663 36667665
No 225
>1zce_A Hypothetical protein ATU2648; alpha-beta protein., structural genomics, PSI, protein struc initiative; 1.30A {Agrobacterium tumefaciens str} SCOP: b.122.1.8
Probab=21.27 E-value=36 Score=21.34 Aligned_cols=12 Identities=25% Similarity=0.351 Sum_probs=10.2
Q ss_pred eccCCCEEEeCC
Q 045997 24 SVKEGDTVLLPE 35 (63)
Q Consensus 24 ~vk~GD~Vl~~~ 35 (63)
..|+||.++|=.
T Consensus 43 ~Mk~GD~~fFYH 54 (155)
T 1zce_A 43 AMKIGDKGFFYH 54 (155)
T ss_dssp TCCTTCEEEEEE
T ss_pred hccCCCEEEEEE
Confidence 699999999943
No 226
>1jer_A Cucumber stellacyanin; electron transport, copper, glycoprotein, hydroxylation; 1.60A {Cucumis sativus} SCOP: b.6.1.1
Probab=21.24 E-value=40 Score=20.39 Aligned_cols=13 Identities=15% Similarity=0.245 Sum_probs=10.8
Q ss_pred eccCCCEEEeCCC
Q 045997 24 SVKEGDTVLLPEY 36 (63)
Q Consensus 24 ~vk~GD~Vl~~~y 36 (63)
.+++||+++|.=.
T Consensus 31 ~F~vGD~LvF~y~ 43 (138)
T 1jer_A 31 TFRVGDSLQFNFP 43 (138)
T ss_dssp CEETTCEEEECCC
T ss_pred cCcCCCEEEEeec
Confidence 6899999999644
No 227
>2dnc_A Pyruvate dehydrogenase protein X component; lipoic acid, lipoyl domain, 2-oxoacid dehydrogenase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=21.21 E-value=45 Score=18.49 Aligned_cols=16 Identities=31% Similarity=0.493 Sum_probs=11.4
Q ss_pred CCCeEEeeeccCCCEE
Q 045997 16 VNGKFIPVSVKEGDTV 31 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~V 31 (63)
..|......+++||+|
T Consensus 20 ~~G~i~~~~v~~Gd~V 35 (98)
T 2dnc_A 20 EEGNIVKWLKKEGEAV 35 (98)
T ss_dssp SEECEEEESSCTTCEE
T ss_pred ccEEEEEEEcCCCCEe
Confidence 4567777777788775
No 228
>1ghj_A E2, E2, the dihydrolipoamide succinyltransferase component of 2-oxoglutarate dehydrogenase...; glycolysis, acyltransferase, lipoyl; NMR {Azotobacter vinelandii} SCOP: b.84.1.1 PDB: 1ghk_A
Probab=21.20 E-value=35 Score=17.70 Aligned_cols=16 Identities=25% Similarity=0.416 Sum_probs=9.4
Q ss_pred CCCeEEeeeccCCCEE
Q 045997 16 VNGKFIPVSVKEGDTV 31 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~V 31 (63)
..|......+++||+|
T Consensus 14 ~~G~i~~~~v~~Gd~V 29 (79)
T 1ghj_A 14 ADGTVATWHKKPGEAV 29 (79)
T ss_dssp SCEEECCCSSCTTSEE
T ss_pred CCEEEEEEEcCCCCEE
Confidence 3555555666666654
No 229
>1dgw_Y Canavalin; duplicated swiss-roll beta barrels, loops with alpha helices merohedral/ hemihedral twinning, plant protein; 1.70A {Canavalia ensiformis} SCOP: b.82.1.2 PDB: 1dgr_Y
Probab=21.13 E-value=1.2e+02 Score=17.04 Aligned_cols=32 Identities=19% Similarity=0.153 Sum_probs=21.8
Q ss_pred EeeeccCCCEEEeCCCC-ceEEEECCEEEEEEe
Q 045997 21 IPVSVKEGDTVLLPEYG-GAEVKLGDKKYHLYE 52 (63)
Q Consensus 21 ~p~~vk~GD~Vl~~~y~-g~ev~~~g~~y~i~~ 52 (63)
+.-.|+.||..+.|.+- -..+--++-+|+-++
T Consensus 6 ~~~~l~~G~v~vVPq~~~v~~~A~~~le~v~F~ 38 (93)
T 1dgw_Y 6 YAATLSEGDIIVIPSSFPVALKAASDLNMVGIG 38 (93)
T ss_dssp EEEEECTTCEEEECTTCCEEEEESSSEEEEEEE
T ss_pred hhceecCCcEEEECCCCceeEEecCCeEEEEEE
Confidence 34589999999999944 444444566666553
No 230
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=21.11 E-value=30 Score=23.33 Aligned_cols=15 Identities=33% Similarity=0.769 Sum_probs=12.5
Q ss_pred eEEeeeccCCCEEEe
Q 045997 19 KFIPVSVKEGDTVLL 33 (63)
Q Consensus 19 ~~~p~~vk~GD~Vl~ 33 (63)
.+.|..+|+||+|-+
T Consensus 3 ~i~P~~L~~GD~I~i 17 (327)
T 4h1h_A 3 AMIPAKLKQGDEIRI 17 (327)
T ss_dssp SBCCCCCCTTCEEEE
T ss_pred cccCCCCCCCCEEEE
Confidence 457889999999976
No 231
>3fz3_A Prunin; TREE NUT allergen, allergy, amandin, almond, 11S SEED storage protein, allergen; 2.40A {Prunus dulcis} PDB: 3ehk_A
Probab=21.11 E-value=2.5e+02 Score=20.68 Aligned_cols=23 Identities=26% Similarity=0.582 Sum_probs=17.5
Q ss_pred CCeE-EeeeccCCCEEEeCCCCce
Q 045997 17 NGKF-IPVSVKEGDTVLLPEYGGA 39 (63)
Q Consensus 17 ~G~~-~p~~vk~GD~Vl~~~y~g~ 39 (63)
+|.. ....|++||.++||.....
T Consensus 434 ~G~~v~~~~L~~GDV~v~P~G~~H 457 (531)
T 3fz3_A 434 NGDAILDQEVQQGQLFIVPQNHGV 457 (531)
T ss_dssp TSCEEEEEEEETTCEEEECTTCEE
T ss_pred CCcEEEEEEecCCeEEEECCCCeE
Confidence 4433 4678999999999996654
No 232
>2eyq_A TRCF, transcription-repair coupling factor; MFD, SF2 ATPase, hydrolase; HET: EPE; 3.20A {Escherichia coli} SCOP: b.34.18.1 c.37.1.19 c.37.1.19 c.37.1.19 c.37.1.19 d.315.1.1
Probab=21.10 E-value=89 Score=24.63 Aligned_cols=30 Identities=23% Similarity=0.409 Sum_probs=21.8
Q ss_pred eccCCCEEEeCCCC-----ce-EEEECC--EEEEEEec
Q 045997 24 SVKEGDTVLLPEYG-----GA-EVKLGD--KKYHLYED 53 (63)
Q Consensus 24 ~vk~GD~Vl~~~y~-----g~-ev~~~g--~~y~i~~e 53 (63)
++++||.|+..+|+ |- .++++| .+|+.+..
T Consensus 479 ~l~~Gd~vvH~~hGig~~~gl~~~~~~g~~~~~~~~~y 516 (1151)
T 2eyq_A 479 ELHIGQPVVHLEHGVGRYAGMTTLEAGGITGEYLMLTY 516 (1151)
T ss_dssp TCCTTCEEEETTTEEEEEEEEEEEESSSCEEEEEEEEC
T ss_pred hCCCCCeEeecccceeEECcEEEEecCCCCcceEEEEe
Confidence 79999999998876 32 445665 47777664
No 233
>1zx5_A Mannosephosphate isomerase, putative; STRU genomics, PSI, protein structure initiative, midwest center structural genomics, MCSG; HET: LFR; 2.30A {Archaeoglobus fulgidus} SCOP: b.82.1.3
Probab=21.07 E-value=1.7e+02 Score=19.47 Aligned_cols=22 Identities=14% Similarity=0.321 Sum_probs=16.4
Q ss_pred eeccCCCEEEeCCCCceEEEECC
Q 045997 23 VSVKEGDTVLLPEYGGAEVKLGD 45 (63)
Q Consensus 23 ~~vk~GD~Vl~~~y~g~ev~~~g 45 (63)
..++.||.++++...+ ++++.|
T Consensus 267 ~~l~~G~~~~ipa~~~-~~~i~g 288 (300)
T 1zx5_A 267 ADLHRGYSCLVPASTD-SFTVES 288 (300)
T ss_dssp EEECTTCEEEECTTCC-EEEEEE
T ss_pred EEEccceEEEEeCCCc-eEEEEe
Confidence 4699999999998765 355544
No 234
>2og0_A Excisionase; protein-DNA complex, DNA architectural protein, 'winged'HELI protein, phage excision; 1.90A {Enterobacteria phage lambda} SCOP: a.6.1.7 PDB: 1lx8_A 1rh6_A 2ief_A
Probab=20.86 E-value=53 Score=16.70 Aligned_cols=21 Identities=29% Similarity=0.496 Sum_probs=17.3
Q ss_pred CCCeEEeeeccCCCEEEeCCC
Q 045997 16 VNGKFIPVSVKEGDTVLLPEY 36 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~Vl~~~y 36 (63)
.+|.+.|..+|+|-.=.|.+-
T Consensus 26 r~G~I~Pp~~KvGr~wrv~~~ 46 (52)
T 2og0_A 26 RESRIFPPPVKDGREYLFHES 46 (52)
T ss_dssp HTTCEESCCEEETTEEEEETT
T ss_pred HCCCCCCcccccCCEEEEccc
Confidence 478899999999988887653
No 235
>2kuf_A PKNB, serine/threonine-protein kinase PKNB; external domain, signaling, STPK, resuscitation, transferase; NMR {Mycobacterium tuberculosis}
Probab=20.65 E-value=1.2e+02 Score=17.22 Aligned_cols=37 Identities=24% Similarity=0.555 Sum_probs=22.5
Q ss_pred eEEEEEECC--CeeCCCCeEEeeeccCCCEEEeCCCCce
Q 045997 3 SGKVVAVGP--GARDVNGKFIPVSVKEGDTVLLPEYGGA 39 (63)
Q Consensus 3 ~G~VvAVG~--G~~~~~G~~~p~~vk~GD~Vl~~~y~g~ 39 (63)
.|+|++--| |.....|..+.+.+..|..+..+++.|.
T Consensus 44 ~g~Vi~q~P~~G~~v~~g~~V~l~vs~g~~v~vPdv~G~ 82 (139)
T 2kuf_A 44 AGEVTGTNPPAGTTVPVDSVIELQVSKGNQFVMPDLSGM 82 (139)
T ss_dssp TTEEEEESSCTTEEEETTSEEEEEEEECSEEECCCCCSC
T ss_pred CCEEEEEcCCCCCCccCCCEEEEEEeCCCcccCCccCCC
Confidence 366776655 4444556666666666665666666654
No 236
>1vq8_T 50S ribosomal protein L24P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: b.34.5.1 PDB: 1vq4_T* 1vq5_T* 1vq6_T* 1vq7_T* 1s72_T* 1vq9_T* 1vqk_T* 1vql_T* 1vqm_T* 1vqn_T* 1vqo_T* 1vqp_T* 1yhq_T* 1yi2_T* 1yij_T* 1yit_T* 1yj9_T* 1yjn_T* 1yjw_T* 2otj_T* ...
Probab=20.56 E-value=75 Score=18.99 Aligned_cols=18 Identities=39% Similarity=0.667 Sum_probs=14.0
Q ss_pred eeeccCCCEEEe--CCCCce
Q 045997 22 PVSVKEGDTVLL--PEYGGA 39 (63)
Q Consensus 22 p~~vk~GD~Vl~--~~y~g~ 39 (63)
.+.++.||+|.. .+|.|.
T Consensus 40 ~~~IkkGD~V~Vi~G~dKGk 59 (120)
T 1vq8_T 40 NVRVNAGDTVEVLRGDFAGE 59 (120)
T ss_dssp EEECCTTCEEEECSSTTTTC
T ss_pred cccccCCCEEEEEecCCCCC
Confidence 468999999988 447664
No 237
>3ie4_A GRAM-negative binding protein 3; immunoglobulin fold, immune system; 1.45A {Drosophila melanogaster}
Probab=20.53 E-value=62 Score=18.82 Aligned_cols=23 Identities=30% Similarity=0.403 Sum_probs=15.2
Q ss_pred eeeccCCCEEEeCCCCceEEEECCEEE
Q 045997 22 PVSVKEGDTVLLPEYGGAEVKLGDKKY 48 (63)
Q Consensus 22 p~~vk~GD~Vl~~~y~g~ev~~~g~~y 48 (63)
...+|+||++.|-=| +..+|.-|
T Consensus 65 ~~~lk~GD~I~Ywv~----V~~ng~~y 87 (107)
T 3ie4_A 65 ITALKPGDTLYYWTY----VIYNGLGY 87 (107)
T ss_dssp SCCCCTTCEEEEEEE----EEETTEEE
T ss_pred CceeCCCCEEEEEEE----EEECCcce
Confidence 358999999988643 34444444
No 238
>1wid_A DNA-binding protein RAV1; DNA-binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Arabidopsis thaliana} SCOP: b.142.1.2
Probab=20.44 E-value=42 Score=19.69 Aligned_cols=12 Identities=25% Similarity=0.578 Sum_probs=10.3
Q ss_pred eccCCCEEEeCC
Q 045997 24 SVKEGDTVLLPE 35 (63)
Q Consensus 24 ~vk~GD~Vl~~~ 35 (63)
.+++||.++|..
T Consensus 91 ~L~~GD~~~F~~ 102 (130)
T 1wid_A 91 NLRAGDVVSFSR 102 (130)
T ss_dssp TCCTTCEEEEEE
T ss_pred CCCCCCEEEEEE
Confidence 589999999965
No 239
>3j21_U 50S ribosomal protein L24P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=20.43 E-value=80 Score=18.86 Aligned_cols=18 Identities=33% Similarity=0.639 Sum_probs=13.9
Q ss_pred eeeccCCCEEEe--CCCCce
Q 045997 22 PVSVKEGDTVLL--PEYGGA 39 (63)
Q Consensus 22 p~~vk~GD~Vl~--~~y~g~ 39 (63)
.+.++.||+|.. .++.|.
T Consensus 43 ~~~IkkGD~V~Vi~GkdKGk 62 (121)
T 3j21_U 43 NLPVRVGDKVRIMRGDYKGH 62 (121)
T ss_dssp EEECCSSSEEEECSSSCSSE
T ss_pred ccccccCCEEEEeecCCCCc
Confidence 468999999988 447664
No 240
>2dne_A Dihydrolipoyllysine-residue acetyltransferase component of pyruvate dehydrogenase...; lipoyl domain, lipoic acid, 2-oxoacid dehydrogenase; NMR {Homo sapiens}
Probab=20.41 E-value=42 Score=19.03 Aligned_cols=16 Identities=31% Similarity=0.447 Sum_probs=11.0
Q ss_pred CCCeEEeeeccCCCEE
Q 045997 16 VNGKFIPVSVKEGDTV 31 (63)
Q Consensus 16 ~~G~~~p~~vk~GD~V 31 (63)
..|......+++||+|
T Consensus 20 ~~G~v~~~~v~~Gd~V 35 (108)
T 2dne_A 20 QAGTIARWEKKEGDKI 35 (108)
T ss_dssp CEEEEEECSSCTTCEE
T ss_pred ccEEEEEEEcCCCCEe
Confidence 4566677777777765
No 241
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=20.28 E-value=41 Score=20.31 Aligned_cols=12 Identities=50% Similarity=0.609 Sum_probs=10.2
Q ss_pred eccCCCEEEeCC
Q 045997 24 SVKEGDTVLLPE 35 (63)
Q Consensus 24 ~vk~GD~Vl~~~ 35 (63)
.+|+||+|++..
T Consensus 3 ~~~~Gd~V~~~~ 14 (248)
T 2yvl_A 3 SFKEGEYVLIRF 14 (248)
T ss_dssp CCCTTCEEEEEE
T ss_pred cCCCCCEEEEEe
Confidence 489999999864
No 242
>2k32_A A; NMR {Campylobacter jejuni} PDB: 2k33_A*
Probab=20.21 E-value=55 Score=18.11 Aligned_cols=15 Identities=33% Similarity=0.519 Sum_probs=8.2
Q ss_pred CCeEEeeeccCCCEE
Q 045997 17 NGKFIPVSVKEGDTV 31 (63)
Q Consensus 17 ~G~~~p~~vk~GD~V 31 (63)
.|......|++||+|
T Consensus 9 ~G~V~~v~v~~G~~V 23 (116)
T 2k32_A 9 SGVIVNKLFKAGDKV 23 (116)
T ss_dssp CEEEEEECSCTTSEE
T ss_pred CEEEEEEECCCcCEE
Confidence 344445556666655
No 243
>2ux6_A Pseudoazurin; type-1 copper, metal-binding, redox potential, copper, transport, cupredoxin, periplasmic, electron transport; 1.3A {Achromobacter cycloclastes} PDB: 2ux7_A 2uxf_A 2uxg_A 1bqk_A 1bqr_A 1zia_A 1zib_A 2jkw_A
Probab=20.02 E-value=39 Score=19.51 Aligned_cols=13 Identities=38% Similarity=0.493 Sum_probs=10.6
Q ss_pred eeccCCCEEEeCC
Q 045997 23 VSVKEGDTVLLPE 35 (63)
Q Consensus 23 ~~vk~GD~Vl~~~ 35 (63)
+.|++||+|.|..
T Consensus 23 i~V~~GdtV~f~n 35 (122)
T 2ux6_A 23 LKVAPGDTVTFIP 35 (122)
T ss_dssp EEECTTEEEEEEE
T ss_pred EEECCCCEEEEEE
Confidence 4789999999854
Done!