Query 045998
Match_columns 408
No_of_seqs 207 out of 1779
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 07:39:50 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045998.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/045998hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02555 limonoid glucosyltran 100.0 1.6E-67 3.4E-72 526.7 38.8 387 13-408 68-470 (480)
2 PLN02173 UDP-glucosyl transfer 100.0 2.5E-66 5.5E-71 514.0 38.5 379 12-408 54-449 (449)
3 PLN02410 UDP-glucoronosyl/UDP- 100.0 3.1E-66 6.7E-71 515.4 38.2 378 12-407 55-450 (451)
4 PLN02152 indole-3-acetate beta 100.0 5.1E-65 1.1E-69 505.5 37.3 377 12-406 56-455 (455)
5 PLN02210 UDP-glucosyl transfer 100.0 1.3E-64 2.8E-69 505.5 38.8 380 12-406 61-454 (456)
6 PLN02207 UDP-glycosyltransfera 100.0 6.1E-64 1.3E-68 498.8 39.0 382 12-407 61-465 (468)
7 PLN03015 UDP-glucosyl transfer 100.0 4.3E-63 9.2E-68 491.1 35.7 373 13-406 61-467 (470)
8 PLN02992 coniferyl-alcohol glu 100.0 4.1E-63 9E-68 493.7 35.6 371 12-407 57-469 (481)
9 PLN00164 glucosyltransferase; 100.0 1.2E-62 2.7E-67 494.2 38.0 374 13-408 67-474 (480)
10 PLN03004 UDP-glycosyltransfera 100.0 8.6E-63 1.9E-67 489.0 33.8 367 12-396 62-450 (451)
11 PLN02534 UDP-glycosyltransfera 100.0 3.1E-62 6.7E-67 489.2 37.0 383 13-407 64-486 (491)
12 PLN02562 UDP-glycosyltransfera 100.0 8.8E-62 1.9E-66 484.5 37.5 368 13-406 58-448 (448)
13 PLN02167 UDP-glycosyltransfera 100.0 9.1E-62 2E-66 488.6 37.7 380 12-407 62-472 (475)
14 PLN02554 UDP-glycosyltransfera 100.0 1.2E-61 2.6E-66 488.4 38.1 375 12-407 63-478 (481)
15 PLN02863 UDP-glucoronosyl/UDP- 100.0 1.3E-61 2.9E-66 485.3 36.9 384 12-407 60-471 (477)
16 PLN02764 glycosyltransferase f 100.0 1.8E-60 3.8E-65 471.0 34.8 357 13-407 59-445 (453)
17 PLN02448 UDP-glycosyltransfera 100.0 6E-60 1.3E-64 474.3 37.7 376 12-407 62-457 (459)
18 PLN02670 transferase, transfer 100.0 6.3E-60 1.4E-64 470.5 34.6 374 12-407 58-465 (472)
19 PLN02208 glycosyltransferase f 100.0 3.6E-59 7.9E-64 463.6 35.8 357 13-407 56-439 (442)
20 PLN03007 UDP-glucosyltransfera 100.0 9.4E-59 2E-63 468.0 37.9 385 13-407 65-480 (482)
21 PLN00414 glycosyltransferase f 100.0 4.6E-59 9.9E-64 463.3 34.8 359 13-407 56-440 (446)
22 PHA03392 egt ecdysteroid UDP-g 100.0 3.7E-44 8.1E-49 362.7 28.2 276 60-386 135-448 (507)
23 PF00201 UDPGT: UDP-glucoronos 100.0 2E-46 4.3E-51 383.0 8.3 275 60-387 118-426 (500)
24 KOG1192 UDP-glucuronosyl and U 100.0 2E-37 4.4E-42 316.3 19.4 300 38-385 90-437 (496)
25 TIGR01426 MGT glycosyltransfer 100.0 4.3E-33 9.2E-38 276.2 29.3 318 6-386 35-375 (392)
26 cd03784 GT1_Gtf_like This fami 100.0 1.2E-30 2.6E-35 259.4 20.5 159 207-386 228-387 (401)
27 COG1819 Glycosyl transferases, 100.0 4.2E-28 9.1E-33 239.5 21.5 164 219-406 236-399 (406)
28 PF13528 Glyco_trans_1_3: Glyc 99.7 2.3E-16 4.9E-21 151.9 15.6 122 219-364 191-317 (318)
29 PRK12446 undecaprenyldiphospho 99.7 9.1E-15 2E-19 142.6 22.9 146 218-380 183-336 (352)
30 TIGR00661 MJ1255 conserved hyp 99.6 2.1E-14 4.7E-19 138.5 14.6 123 220-367 188-314 (321)
31 COG0707 MurG UDP-N-acetylgluco 99.5 6.2E-12 1.3E-16 121.9 25.8 135 219-367 182-324 (357)
32 PF04101 Glyco_tran_28_C: Glyc 99.5 3.5E-15 7.6E-20 130.1 -0.4 136 222-367 1-144 (167)
33 PRK00726 murG undecaprenyldiph 99.5 1.3E-11 2.9E-16 120.7 22.5 169 219-408 182-357 (357)
34 cd03785 GT1_MurG MurG is an N- 99.4 1.1E-10 2.4E-15 113.7 21.4 139 219-367 180-324 (350)
35 PRK13609 diacylglycerol glucos 99.2 6.4E-09 1.4E-13 102.7 24.9 164 219-403 201-367 (380)
36 PRK13608 diacylglycerol glucos 99.2 2.9E-09 6.3E-14 105.6 22.5 132 219-367 201-338 (391)
37 PLN02605 monogalactosyldiacylg 99.2 2.8E-08 6.1E-13 98.3 27.4 166 218-404 204-378 (382)
38 TIGR00215 lpxB lipid-A-disacch 99.1 1.3E-08 2.9E-13 100.6 19.4 171 218-402 189-383 (385)
39 TIGR03492 conserved hypothetic 99.0 6.7E-08 1.5E-12 95.8 22.1 163 220-401 205-392 (396)
40 PRK00025 lpxB lipid-A-disaccha 98.8 1.5E-06 3.1E-11 85.8 23.0 172 219-405 185-375 (380)
41 TIGR01133 murG undecaprenyldip 98.8 8.6E-08 1.9E-12 93.2 13.3 81 286-375 243-326 (348)
42 TIGR03590 PseG pseudaminic aci 98.6 1.7E-07 3.8E-12 88.5 10.3 103 221-333 171-278 (279)
43 cd03814 GT1_like_2 This family 98.5 0.00014 3E-09 70.2 26.3 127 221-367 197-332 (364)
44 TIGR00236 wecB UDP-N-acetylglu 98.5 1.6E-05 3.5E-10 78.1 19.7 156 221-403 198-363 (365)
45 cd03800 GT1_Sucrose_synthase T 98.3 0.00085 1.8E-08 66.0 26.9 80 276-367 282-368 (398)
46 PRK05749 3-deoxy-D-manno-octul 98.3 0.00048 1E-08 69.1 25.1 80 278-367 303-388 (425)
47 PRK14089 ipid-A-disaccharide s 98.2 5.2E-05 1.1E-09 73.5 16.6 146 221-384 168-332 (347)
48 PF02350 Epimerase_2: UDP-N-ac 98.2 3.4E-05 7.5E-10 75.1 14.2 269 44-398 55-342 (346)
49 COG4671 Predicted glycosyl tra 98.1 2.7E-05 5.9E-10 73.4 10.9 134 219-366 218-364 (400)
50 KOG3349 Predicted glycosyltran 98.1 1.7E-05 3.7E-10 65.6 8.1 114 222-342 5-130 (170)
51 cd03798 GT1_wlbH_like This fam 98.0 0.0038 8.2E-08 59.8 25.5 136 220-368 201-345 (377)
52 cd03822 GT1_ecORF704_like This 97.9 0.014 3.1E-07 56.2 27.1 82 275-367 245-334 (366)
53 cd03818 GT1_ExpC_like This fam 97.9 0.03 6.5E-07 55.5 29.0 81 277-367 281-366 (396)
54 PF02684 LpxB: Lipid-A-disacch 97.9 0.0034 7.3E-08 61.5 20.9 171 218-398 182-368 (373)
55 TIGR02472 sucr_P_syn_N sucrose 97.8 0.0096 2.1E-07 60.1 24.9 81 275-367 315-406 (439)
56 COG1519 KdtA 3-deoxy-D-manno-o 97.8 0.0058 1.3E-07 59.6 21.4 132 223-367 233-386 (419)
57 cd03804 GT1_wbaZ_like This fam 97.8 0.00082 1.8E-08 65.3 15.9 127 223-368 197-327 (351)
58 cd03823 GT1_ExpE7_like This fa 97.8 0.0015 3.2E-08 62.7 16.7 134 219-367 189-329 (359)
59 cd04946 GT1_AmsK_like This fam 97.8 0.0016 3.4E-08 65.0 17.4 164 221-402 230-406 (407)
60 cd05844 GT1_like_7 Glycosyltra 97.7 0.0012 2.6E-08 64.3 16.1 81 275-367 243-336 (367)
61 TIGR02918 accessory Sec system 97.7 0.0067 1.5E-07 62.1 21.5 102 276-383 375-483 (500)
62 cd03786 GT1_UDP-GlcNAc_2-Epime 97.7 0.0003 6.6E-09 68.7 11.3 133 219-367 197-337 (363)
63 cd03795 GT1_like_4 This family 97.7 0.00066 1.4E-08 65.6 13.5 132 221-367 191-332 (357)
64 cd04949 GT1_gtfA_like This fam 97.7 0.016 3.5E-07 56.6 22.8 98 276-382 260-361 (372)
65 cd03801 GT1_YqgM_like This fam 97.6 0.0035 7.7E-08 59.7 17.4 81 275-367 254-341 (374)
66 TIGR02468 sucrsPsyn_pln sucros 97.6 0.047 1E-06 59.9 26.7 146 207-367 467-637 (1050)
67 PF13844 Glyco_transf_41: Glyc 97.6 0.00061 1.3E-08 68.1 11.5 139 218-367 282-430 (468)
68 cd03794 GT1_wbuB_like This fam 97.6 0.0017 3.8E-08 62.7 14.4 135 220-367 219-365 (394)
69 PRK15427 colanic acid biosynth 97.6 0.0063 1.4E-07 60.8 18.6 80 276-367 278-371 (406)
70 PRK15484 lipopolysaccharide 1, 97.6 0.0092 2E-07 59.0 19.5 83 274-367 254-344 (380)
71 cd03817 GT1_UGDG_like This fam 97.5 0.004 8.8E-08 59.9 16.6 131 221-368 202-344 (374)
72 PRK01021 lpxB lipid-A-disaccha 97.5 0.027 5.9E-07 58.0 22.4 166 218-396 411-597 (608)
73 PF00534 Glycos_transf_1: Glyc 97.5 0.0026 5.7E-08 54.9 13.1 134 219-367 13-158 (172)
74 TIGR03568 NeuC_NnaA UDP-N-acet 97.5 0.0074 1.6E-07 59.3 17.5 129 220-366 201-338 (365)
75 COG5017 Uncharacterized conser 97.4 0.0018 3.9E-08 52.8 9.9 108 223-345 2-122 (161)
76 cd03821 GT1_Bme6_like This fam 97.4 0.0061 1.3E-07 58.6 15.7 80 276-367 261-345 (375)
77 PRK09922 UDP-D-galactose:(gluc 97.4 0.0079 1.7E-07 58.8 16.4 163 222-408 181-359 (359)
78 cd04962 GT1_like_5 This family 97.4 0.0091 2E-07 58.1 16.5 80 276-367 252-336 (371)
79 cd03825 GT1_wcfI_like This fam 97.3 0.022 4.7E-07 55.1 18.9 81 275-367 242-330 (365)
80 cd03808 GT1_cap1E_like This fa 97.3 0.014 3E-07 55.6 16.9 134 219-367 186-329 (359)
81 cd03799 GT1_amsK_like This is 97.3 0.012 2.5E-07 56.8 16.0 134 220-367 178-327 (355)
82 PLN02871 UDP-sulfoquinovose:DA 97.3 0.02 4.3E-07 58.2 18.1 126 222-367 264-400 (465)
83 TIGR02149 glgA_Coryne glycogen 97.2 0.012 2.6E-07 57.8 15.7 131 222-367 202-352 (388)
84 PRK10307 putative glycosyl tra 97.2 0.012 2.6E-07 58.6 15.9 81 277-367 284-373 (412)
85 COG3980 spsG Spore coat polysa 97.2 0.0032 6.9E-08 58.0 10.2 143 222-382 160-305 (318)
86 COG0381 WecB UDP-N-acetylgluco 97.2 0.062 1.3E-06 52.2 19.3 155 220-402 204-369 (383)
87 cd03807 GT1_WbnK_like This fam 97.2 0.024 5.3E-07 54.1 16.9 78 276-367 250-332 (365)
88 PF13692 Glyco_trans_1_4: Glyc 97.1 0.0034 7.3E-08 51.9 9.3 127 222-367 3-135 (135)
89 cd03820 GT1_amsD_like This fam 97.1 0.016 3.4E-07 55.0 14.9 88 276-378 234-327 (348)
90 cd04951 GT1_WbdM_like This fam 97.1 0.015 3.4E-07 56.0 14.9 88 276-379 244-336 (360)
91 TIGR03088 stp2 sugar transfera 97.0 0.033 7.1E-07 54.5 16.1 80 276-367 254-338 (374)
92 cd03816 GT1_ALG1_like This fam 96.9 0.018 3.9E-07 57.6 14.0 91 277-381 294-399 (415)
93 TIGR03087 stp1 sugar transfera 96.8 0.065 1.4E-06 53.1 16.9 80 276-367 279-362 (397)
94 PF04007 DUF354: Protein of un 96.8 0.15 3.3E-06 49.3 18.6 126 219-365 178-308 (335)
95 cd03819 GT1_WavL_like This fam 96.8 0.035 7.5E-07 53.5 14.5 135 220-366 184-329 (355)
96 COG3914 Spy Predicted O-linked 96.8 0.022 4.8E-07 57.5 12.9 133 218-362 427-573 (620)
97 cd03806 GT1_ALG11_like This fa 96.8 0.54 1.2E-05 47.1 23.0 80 275-368 303-393 (419)
98 cd03805 GT1_ALG2_like This fam 96.8 0.046 1E-06 53.8 15.1 80 276-368 279-365 (392)
99 cd03796 GT1_PIG-A_like This fa 96.7 0.072 1.6E-06 52.8 16.5 130 220-367 192-333 (398)
100 cd03809 GT1_mtfB_like This fam 96.7 0.029 6.2E-07 54.0 13.4 89 275-378 251-344 (365)
101 cd03811 GT1_WabH_like This fam 96.7 0.037 7.9E-07 52.4 13.8 134 220-367 188-332 (353)
102 cd03813 GT1_like_3 This family 96.7 0.1 2.2E-06 53.2 17.7 80 276-367 353-442 (475)
103 TIGR03449 mycothiol_MshA UDP-N 96.7 0.055 1.2E-06 53.6 15.4 80 276-367 282-368 (405)
104 PLN02949 transferase, transfer 96.7 0.91 2E-05 46.2 23.9 81 275-367 333-422 (463)
105 PF06722 DUF1205: Protein of u 96.6 0.0027 5.8E-08 49.6 3.8 57 212-268 32-93 (97)
106 KOG4626 O-linked N-acetylgluco 96.5 0.02 4.3E-07 58.1 10.3 122 218-346 756-889 (966)
107 cd04955 GT1_like_6 This family 96.5 0.069 1.5E-06 51.5 14.2 123 224-367 196-330 (363)
108 cd03802 GT1_AviGT4_like This f 96.2 0.11 2.5E-06 49.4 13.7 128 223-367 173-308 (335)
109 PRK09814 beta-1,6-galactofuran 96.2 0.023 5E-07 55.1 8.7 97 276-386 206-318 (333)
110 PRK15179 Vi polysaccharide bio 96.1 0.26 5.6E-06 52.5 16.6 95 276-380 573-673 (694)
111 cd03812 GT1_CapH_like This fam 96.0 0.16 3.5E-06 48.9 14.0 132 221-368 192-332 (358)
112 cd03792 GT1_Trehalose_phosphor 96.0 0.59 1.3E-05 45.7 18.0 78 276-367 251-337 (372)
113 cd04950 GT1_like_1 Glycosyltra 95.8 0.37 8.1E-06 47.4 15.7 78 277-368 254-341 (373)
114 PHA01633 putative glycosyl tra 95.7 0.45 9.8E-06 46.1 15.3 102 275-383 199-323 (335)
115 PRK15490 Vi polysaccharide bio 95.6 0.64 1.4E-05 47.9 16.3 64 276-346 454-522 (578)
116 PRK10017 colanic acid biosynth 95.5 0.44 9.5E-06 47.8 14.9 177 212-406 226-423 (426)
117 TIGR02095 glgA glycogen/starch 95.5 0.58 1.3E-05 47.6 16.2 132 222-366 292-436 (473)
118 PLN00142 sucrose synthase 95.4 5.1 0.00011 43.4 25.9 78 276-365 641-730 (815)
119 PRK14098 glycogen synthase; Pr 95.3 0.79 1.7E-05 46.9 16.4 134 222-365 308-449 (489)
120 PLN02275 transferase, transfer 95.2 0.18 4E-06 49.5 10.9 75 277-365 286-371 (371)
121 PRK00654 glgA glycogen synthas 95.1 1.2 2.6E-05 45.3 16.8 136 221-366 282-427 (466)
122 cd03791 GT1_Glycogen_synthase_ 94.4 1.3 2.8E-05 45.0 15.0 136 221-366 296-441 (476)
123 TIGR02470 sucr_synth sucrose s 94.3 9.5 0.00021 41.3 26.4 80 276-365 618-707 (784)
124 PHA01630 putative group 1 glyc 92.2 12 0.00026 36.2 17.3 79 283-367 196-294 (331)
125 PLN02846 digalactosyldiacylgly 92.1 3.7 8E-05 41.6 13.8 73 281-368 288-364 (462)
126 TIGR03713 acc_sec_asp1 accesso 91.7 1.8 4E-05 44.6 11.3 74 277-367 409-488 (519)
127 PF13524 Glyco_trans_1_2: Glyc 91.6 2.8 6.1E-05 31.8 9.8 69 302-385 9-78 (92)
128 TIGR02919 accessory Sec system 91.4 3.2 7E-05 41.8 12.5 138 219-383 282-425 (438)
129 TIGR02400 trehalose_OtsA alpha 91.3 2.7 5.8E-05 42.7 12.0 103 283-406 342-455 (456)
130 PLN02316 synthase/transferase 90.8 15 0.00031 41.1 17.5 103 276-390 899-1016(1036)
131 COG0763 LpxB Lipid A disacchar 90.4 8 0.00017 37.8 13.5 248 146-405 84-379 (381)
132 PRK10125 putative glycosyl tra 90.4 5.3 0.00012 39.8 13.0 99 238-361 258-365 (405)
133 TIGR02193 heptsyl_trn_I lipopo 89.7 4.5 9.7E-05 38.7 11.5 142 212-365 171-319 (319)
134 PLN02501 digalactosyldiacylgly 89.4 5.9 0.00013 42.0 12.5 76 278-368 602-682 (794)
135 PLN02939 transferase, transfer 89.2 17 0.00036 40.2 16.1 84 276-366 836-930 (977)
136 PLN03063 alpha,alpha-trehalose 88.3 6.9 0.00015 42.7 12.8 98 289-406 371-476 (797)
137 cd01635 Glycosyltransferase_GT 86.1 6.9 0.00015 34.2 9.8 49 276-326 160-216 (229)
138 cd03788 GT1_TPS Trehalose-6-Ph 84.5 5.9 0.00013 40.2 9.4 103 282-405 346-459 (460)
139 PF03033 Glyco_transf_28: Glyc 84.2 0.44 9.6E-06 39.3 0.9 32 61-92 100-131 (139)
140 PF04464 Glyphos_transf: CDP-G 82.9 4 8.7E-05 39.9 7.3 145 238-402 219-368 (369)
141 PRK02797 4-alpha-L-fucosyltran 81.5 41 0.00089 32.1 12.8 133 222-365 146-292 (322)
142 cd03789 GT1_LPS_heptosyltransf 81.2 6.3 0.00014 36.9 7.6 95 220-321 121-223 (279)
143 TIGR02201 heptsyl_trn_III lipo 80.8 8.4 0.00018 37.3 8.6 105 212-321 172-285 (344)
144 PF06258 Mito_fiss_Elm1: Mitoc 80.4 53 0.0012 31.5 13.7 60 285-346 220-282 (311)
145 PRK14099 glycogen synthase; Pr 79.8 44 0.00095 34.2 13.7 86 275-367 348-447 (485)
146 PF07429 Glyco_transf_56: 4-al 79.0 41 0.00089 32.6 12.1 136 221-366 184-332 (360)
147 TIGR02398 gluc_glyc_Psyn gluco 78.1 49 0.0011 33.9 13.2 107 279-406 364-481 (487)
148 COG0438 RfaG Glycosyltransfera 77.0 60 0.0013 29.7 16.4 79 277-367 257-342 (381)
149 PF05159 Capsule_synth: Capsul 76.8 10 0.00022 35.3 7.6 81 236-322 140-225 (269)
150 PRK06718 precorrin-2 dehydroge 75.3 60 0.0013 28.9 12.1 147 219-388 10-166 (202)
151 PRK10422 lipopolysaccharide co 73.6 21 0.00045 34.7 9.1 98 219-321 182-287 (352)
152 PF01075 Glyco_transf_9: Glyco 73.5 8.1 0.00018 35.2 5.9 98 219-321 104-208 (247)
153 KOG2941 Beta-1,4-mannosyltrans 73.5 81 0.0018 30.7 12.3 144 219-381 253-424 (444)
154 cd07038 TPP_PYR_PDC_IPDC_like 73.4 17 0.00038 31.0 7.5 29 295-323 59-93 (162)
155 COG4370 Uncharacterized protei 72.6 14 0.0003 35.0 6.9 91 277-378 294-387 (412)
156 PRK14501 putative bifunctional 72.5 71 0.0015 34.6 13.5 109 281-406 346-461 (726)
157 cd07035 TPP_PYR_POX_like Pyrim 72.1 19 0.00042 30.2 7.5 29 295-323 59-93 (155)
158 PLN02470 acetolactate synthase 72.0 19 0.00041 37.8 8.9 92 226-322 2-109 (585)
159 cd03793 GT1_Glycogen_synthase_ 71.0 19 0.00041 37.5 8.2 81 286-367 467-552 (590)
160 cd07039 TPP_PYR_POX Pyrimidine 69.8 41 0.00088 28.8 9.0 29 295-323 63-97 (164)
161 TIGR02195 heptsyl_trn_II lipop 68.7 35 0.00076 32.7 9.4 96 219-321 173-276 (334)
162 cd07037 TPP_PYR_MenD Pyrimidin 68.2 37 0.0008 29.1 8.3 29 295-323 60-94 (162)
163 PRK10964 ADP-heptose:LPS hepto 66.5 26 0.00056 33.5 7.9 138 220-366 178-321 (322)
164 PRK10916 ADP-heptose:LPS hepto 66.4 40 0.00086 32.6 9.3 96 219-321 179-286 (348)
165 KOG0853 Glycosyltransferase [C 66.0 51 0.0011 33.6 9.9 61 307-378 381-441 (495)
166 TIGR01470 cysG_Nterm siroheme 65.9 99 0.0021 27.6 11.0 149 219-387 9-165 (205)
167 PF12000 Glyco_trans_4_3: Gkyc 65.0 54 0.0012 28.4 8.7 43 47-89 52-95 (171)
168 COG0859 RfaF ADP-heptose:LPS h 62.8 33 0.00071 33.1 7.9 95 220-321 175-276 (334)
169 PLN03064 alpha,alpha-trehalose 59.4 2E+02 0.0044 32.1 13.7 101 283-406 446-560 (934)
170 cd07025 Peptidase_S66 LD-Carbo 56.0 25 0.00055 33.1 5.6 74 233-324 46-121 (282)
171 TIGR00725 conserved hypothetic 50.6 1.4E+02 0.003 25.5 8.8 100 207-323 20-123 (159)
172 PRK06276 acetolactate synthase 48.4 49 0.0011 34.7 6.9 28 295-322 63-96 (586)
173 COG0801 FolK 7,8-dihydro-6-hyd 47.3 38 0.00082 29.0 4.7 29 222-250 3-31 (160)
174 cd01840 SGNH_hydrolase_yrhL_li 46.7 57 0.0012 27.1 5.9 46 212-258 43-88 (150)
175 PRK02155 ppnK NAD(+)/NADH kina 46.4 1E+02 0.0022 29.3 8.0 95 236-367 21-119 (291)
176 COG3195 Uncharacterized protei 45.6 92 0.002 26.7 6.6 97 286-386 64-165 (176)
177 PF02826 2-Hacid_dh_C: D-isome 45.3 47 0.001 28.8 5.2 107 219-363 36-143 (178)
178 PRK08322 acetolactate synthase 45.0 85 0.0018 32.5 8.0 29 294-322 62-96 (547)
179 PRK07710 acetolactate synthase 44.9 59 0.0013 34.0 6.8 29 294-322 77-111 (571)
180 TIGR00173 menD 2-succinyl-5-en 44.9 1.2E+02 0.0026 30.5 8.8 27 295-321 63-95 (432)
181 COG2159 Predicted metal-depend 44.3 98 0.0021 29.4 7.6 95 208-313 116-212 (293)
182 PRK07525 sulfoacetaldehyde ace 43.9 1.2E+02 0.0025 32.0 8.8 80 237-322 8-101 (588)
183 PRK08979 acetolactate synthase 43.7 74 0.0016 33.3 7.3 29 294-322 66-100 (572)
184 cd07062 Peptidase_S66_mccF_lik 42.9 48 0.001 31.7 5.3 74 233-324 50-125 (308)
185 cd03412 CbiK_N Anaerobic cobal 42.8 44 0.00096 27.3 4.4 37 221-257 2-40 (127)
186 PRK08199 thiamine pyrophosphat 42.4 1.3E+02 0.0028 31.3 8.9 29 294-322 70-104 (557)
187 PRK08527 acetolactate synthase 42.2 73 0.0016 33.3 7.0 28 295-322 66-99 (563)
188 PRK06456 acetolactate synthase 41.7 83 0.0018 32.9 7.3 28 295-322 68-101 (572)
189 PRK07418 acetolactate synthase 41.6 1.4E+02 0.0029 31.7 9.0 29 294-322 84-118 (616)
190 PRK12446 undecaprenyldiphospho 41.4 1.2E+02 0.0026 29.5 7.9 96 221-321 3-120 (352)
191 PRK06932 glycerate dehydrogena 41.2 1.2E+02 0.0027 29.0 7.8 101 219-362 147-248 (314)
192 TIGR00118 acolac_lg acetolacta 40.9 77 0.0017 33.0 6.9 28 295-322 64-97 (558)
193 KOG0202 Ca2+ transporting ATPa 40.6 3.5E+02 0.0075 29.7 11.3 164 220-406 571-748 (972)
194 PF06180 CbiK: Cobalt chelatas 40.4 36 0.00078 31.8 3.9 38 221-258 2-42 (262)
195 PRK08155 acetolactate synthase 40.3 81 0.0017 32.9 7.0 81 236-322 14-109 (564)
196 PRK06487 glycerate dehydrogena 40.1 1.4E+02 0.003 28.6 8.1 101 219-363 148-249 (317)
197 PF06925 MGDG_synth: Monogalac 40.1 92 0.002 26.5 6.3 30 60-89 88-123 (169)
198 PRK15469 ghrA bifunctional gly 39.8 2.8E+02 0.006 26.6 10.0 104 220-362 137-241 (312)
199 COG1448 TyrB Aspartate/tyrosin 39.7 3.9E+02 0.0084 26.4 11.7 165 207-393 159-334 (396)
200 PF02776 TPP_enzyme_N: Thiamin 39.6 68 0.0015 27.5 5.4 30 294-323 63-98 (172)
201 COG0299 PurN Folate-dependent 39.1 2E+02 0.0043 25.6 8.0 105 236-364 66-172 (200)
202 PRK07064 hypothetical protein; 37.9 1.1E+02 0.0025 31.6 7.6 28 295-322 66-99 (544)
203 PRK04885 ppnK inorganic polyph 37.6 65 0.0014 30.1 5.1 53 293-367 35-93 (265)
204 PF06506 PrpR_N: Propionate ca 37.1 34 0.00074 29.6 3.1 33 292-325 31-63 (176)
205 PRK15409 bifunctional glyoxyla 36.6 1.7E+02 0.0036 28.2 8.0 105 219-362 145-251 (323)
206 PRK11269 glyoxylate carboligas 35.9 1.6E+02 0.0035 30.9 8.4 28 295-322 68-101 (591)
207 PRK06882 acetolactate synthase 35.1 1.6E+02 0.0035 30.7 8.3 28 295-322 67-100 (574)
208 PRK06466 acetolactate synthase 35.0 1.1E+02 0.0025 31.9 7.1 28 295-322 67-100 (574)
209 PRK07282 acetolactate synthase 34.8 1.1E+02 0.0024 31.9 6.9 28 295-322 73-106 (566)
210 PF00731 AIRC: AIR carboxylase 34.6 2.8E+02 0.0062 23.4 12.5 137 222-386 2-148 (150)
211 CHL00099 ilvB acetohydroxyacid 34.5 2.1E+02 0.0045 30.0 9.0 29 294-322 75-109 (585)
212 PRK13840 sucrose phosphorylase 34.4 1.9E+02 0.004 29.8 8.2 130 208-362 270-415 (495)
213 PRK12342 hypothetical protein; 34.3 91 0.002 29.0 5.5 39 47-90 100-144 (254)
214 PRK13010 purU formyltetrahydro 34.3 3.6E+02 0.0079 25.5 9.7 115 239-381 159-275 (289)
215 PRK08978 acetolactate synthase 34.0 1.3E+02 0.0029 31.1 7.4 28 295-322 63-96 (548)
216 PRK06270 homoserine dehydrogen 33.1 3.3E+02 0.0072 26.3 9.5 58 286-344 80-149 (341)
217 PRK06048 acetolactate synthase 32.6 1.1E+02 0.0023 32.0 6.4 28 295-322 70-103 (561)
218 PRK08410 2-hydroxyacid dehydro 32.6 2.1E+02 0.0046 27.3 8.0 103 219-363 145-248 (311)
219 PRK06965 acetolactate synthase 32.3 1.3E+02 0.0029 31.5 7.0 29 295-323 84-118 (587)
220 PRK14077 pnk inorganic polypho 32.3 86 0.0019 29.7 5.1 57 289-367 60-120 (287)
221 PRK07574 formate dehydrogenase 32.2 2.5E+02 0.0053 27.9 8.5 73 220-312 193-265 (385)
222 COG0052 RpsB Ribosomal protein 31.9 99 0.0021 28.5 5.1 30 61-90 156-187 (252)
223 PRK14092 2-amino-4-hydroxy-6-h 31.2 1E+02 0.0022 26.5 4.9 31 218-248 5-35 (163)
224 COG0503 Apt Adenine/guanine ph 31.0 1.8E+02 0.0039 25.3 6.6 37 50-88 44-82 (179)
225 PRK01231 ppnK inorganic polyph 30.9 2.7E+02 0.0058 26.5 8.2 54 292-367 61-118 (295)
226 PRK03359 putative electron tra 30.4 1.1E+02 0.0024 28.4 5.4 40 46-90 102-147 (256)
227 PRK12311 rpsB 30S ribosomal pr 30.3 1.2E+02 0.0026 29.3 5.7 31 60-90 151-183 (326)
228 PRK07789 acetolactate synthase 29.9 2.4E+02 0.0052 29.8 8.5 28 295-322 94-127 (612)
229 COG3660 Predicted nucleoside-d 29.7 4.8E+02 0.01 24.6 10.1 95 222-321 164-271 (329)
230 PF07131 DUF1382: Protein of u 29.3 27 0.00058 24.3 0.8 11 10-20 20-30 (61)
231 PRK08266 hypothetical protein; 29.2 3.2E+02 0.0069 28.2 9.2 28 295-322 68-101 (542)
232 PF10093 DUF2331: Uncharacteri 29.2 1.7E+02 0.0036 28.9 6.5 85 234-322 193-289 (374)
233 PRK07979 acetolactate synthase 29.0 1.7E+02 0.0037 30.6 7.2 29 294-322 66-100 (574)
234 PF08766 DEK_C: DEK C terminal 28.8 1.7E+02 0.0038 19.7 4.9 48 353-405 1-48 (54)
235 PRK05858 hypothetical protein; 27.9 2.5E+02 0.0053 29.2 8.1 28 295-322 67-100 (542)
236 PLN02929 NADH kinase 27.6 94 0.002 29.6 4.4 97 234-367 32-137 (301)
237 PRK06725 acetolactate synthase 27.5 1.7E+02 0.0037 30.6 6.9 28 295-322 77-110 (570)
238 TIGR00347 bioD dethiobiotin sy 27.2 1.5E+02 0.0032 25.0 5.4 43 48-93 89-140 (166)
239 PRK13011 formyltetrahydrofolat 27.2 5.4E+02 0.012 24.3 10.3 114 240-381 156-271 (286)
240 cd01018 ZntC Metal binding pro 27.2 2.1E+02 0.0045 26.5 6.8 45 46-92 204-250 (266)
241 COG3340 PepE Peptidase E [Amin 27.0 4.8E+02 0.01 23.6 9.1 45 209-254 23-67 (224)
242 COG1052 LdhA Lactate dehydroge 26.7 2.8E+02 0.006 26.8 7.6 105 220-363 147-252 (324)
243 TIGR03646 YtoQ_fam YtoQ family 26.6 3.7E+02 0.0081 22.2 7.0 34 286-321 68-109 (144)
244 PRK07449 2-succinyl-5-enolpyru 26.4 1.5E+02 0.0033 30.8 6.3 84 235-323 9-106 (568)
245 TIGR03457 sulphoacet_xsc sulfo 26.4 2.5E+02 0.0055 29.3 7.9 29 294-322 63-97 (579)
246 cd03416 CbiX_SirB_N Sirohydroc 26.2 2E+02 0.0042 22.0 5.5 36 221-256 1-38 (101)
247 PRK01911 ppnK inorganic polyph 26.1 1.2E+02 0.0027 28.7 5.0 57 289-367 60-120 (292)
248 PRK07524 hypothetical protein; 26.1 2.5E+02 0.0054 29.0 7.8 28 295-322 64-97 (535)
249 PRK02649 ppnK inorganic polyph 25.7 1.2E+02 0.0025 29.1 4.8 55 291-367 66-124 (305)
250 PRK08617 acetolactate synthase 25.2 2.5E+02 0.0055 29.1 7.7 29 295-323 67-101 (552)
251 PRK04940 hypothetical protein; 25.1 1.6E+02 0.0035 25.8 5.1 30 61-90 60-90 (180)
252 PLN02928 oxidoreductase family 25.0 3.2E+02 0.0068 26.6 7.8 116 219-362 159-277 (347)
253 PF03693 RHH_2: Uncharacterise 24.8 1.3E+02 0.0028 22.4 3.9 50 353-408 29-78 (80)
254 COG0299 PurN Folate-dependent 24.6 1.6E+02 0.0035 26.1 5.0 41 48-88 14-56 (200)
255 TIGR00655 PurU formyltetrahydr 24.5 6E+02 0.013 23.9 9.3 115 239-381 150-266 (280)
256 COG2230 Cfa Cyclopropane fatty 24.3 37 0.00081 32.0 1.1 39 302-341 80-121 (283)
257 PRK07586 hypothetical protein; 24.2 2E+02 0.0043 29.5 6.6 29 295-323 64-98 (514)
258 TIGR01012 Sa_S2_E_A ribosomal 24.1 1.1E+02 0.0023 27.3 3.8 30 61-90 108-139 (196)
259 cd03146 GAT1_Peptidase_E Type 24.0 5.1E+02 0.011 23.0 8.7 46 208-255 18-66 (212)
260 PRK14075 pnk inorganic polypho 23.9 4.5E+02 0.0097 24.3 8.3 53 293-367 41-94 (256)
261 TIGR01504 glyox_carbo_lig glyo 23.9 3.7E+02 0.0081 28.2 8.6 28 295-322 67-100 (588)
262 cd03409 Chelatase_Class_II Cla 23.9 3E+02 0.0065 20.7 6.2 37 222-258 2-41 (101)
263 KOG1111 N-acetylglucosaminyltr 23.9 7.1E+02 0.015 24.6 10.1 82 234-321 209-301 (426)
264 TIGR03609 S_layer_CsaB polysac 23.8 4.3E+02 0.0094 24.6 8.4 98 220-322 172-276 (298)
265 cd01141 TroA_d Periplasmic bin 23.8 1.3E+02 0.0029 25.8 4.5 28 61-88 69-98 (186)
266 PF06506 PrpR_N: Propionate ca 23.8 1.1E+02 0.0023 26.5 3.9 43 45-92 111-153 (176)
267 PRK04539 ppnK inorganic polyph 23.7 1.5E+02 0.0032 28.2 5.1 57 289-367 64-124 (296)
268 TIGR02302 aProt_lowcomp conser 23.7 2.9E+02 0.0063 30.5 7.7 41 366-407 494-534 (851)
269 COG0297 GlgA Glycogen synthase 23.4 8.2E+02 0.018 25.1 14.9 158 222-400 294-470 (487)
270 PRK09107 acetolactate synthase 23.3 2.1E+02 0.0045 30.1 6.6 30 294-323 73-108 (595)
271 PRK03378 ppnK inorganic polyph 22.9 1.4E+02 0.0029 28.4 4.6 56 289-367 59-119 (292)
272 PRK15438 erythronate-4-phospha 22.8 4.3E+02 0.0094 26.1 8.3 61 219-304 116-176 (378)
273 PF02016 Peptidase_S66: LD-car 22.8 68 0.0015 30.3 2.6 73 233-323 46-120 (284)
274 COG1327 Predicted transcriptio 22.6 1.2E+02 0.0027 25.5 3.7 58 303-365 35-92 (156)
275 COG1691 NCAIR mutase (PurE)-re 22.6 3.3E+02 0.0072 24.8 6.6 82 221-325 118-205 (254)
276 PF05225 HTH_psq: helix-turn-h 22.4 1.3E+02 0.0029 19.5 3.2 26 353-380 1-26 (45)
277 PLN03139 formate dehydrogenase 22.1 4.7E+02 0.01 25.9 8.4 73 219-311 199-271 (386)
278 cd01425 RPS2 Ribosomal protein 21.9 1.4E+02 0.003 26.4 4.2 32 60-91 126-159 (193)
279 PF07905 PucR: Purine cataboli 21.8 4.2E+02 0.0091 21.2 7.8 40 212-255 38-78 (123)
280 PRK03372 ppnK inorganic polyph 21.8 1.5E+02 0.0033 28.3 4.8 55 291-367 70-128 (306)
281 TIGR00730 conserved hypothetic 21.6 5.3E+02 0.011 22.4 7.8 103 207-322 21-133 (178)
282 PRK12474 hypothetical protein; 21.5 2.5E+02 0.0054 28.9 6.7 28 295-322 68-101 (518)
283 PRK15424 propionate catabolism 21.5 2.2E+02 0.0047 29.7 6.1 30 293-325 64-93 (538)
284 TIGR03164 UHCUDC OHCU decarbox 21.3 4.6E+02 0.01 22.3 7.2 56 327-386 97-152 (157)
285 PRK04020 rps2P 30S ribosomal p 21.1 1.1E+02 0.0025 27.3 3.5 30 61-90 114-145 (204)
286 PF00282 Pyridoxal_deC: Pyrido 21.1 1.7E+02 0.0037 28.7 5.2 69 296-366 104-190 (373)
287 PF07355 GRDB: Glycine/sarcosi 20.9 2.1E+02 0.0045 27.9 5.3 29 60-88 79-117 (349)
288 PRK06436 glycerate dehydrogena 20.9 5.2E+02 0.011 24.6 8.2 65 219-308 122-186 (303)
289 COG2099 CobK Precorrin-6x redu 20.7 5.9E+02 0.013 23.7 8.0 37 325-362 183-220 (257)
290 cd03786 GT1_UDP-GlcNAc_2-Epime 20.7 1.4E+02 0.0031 28.5 4.5 29 60-88 87-118 (363)
291 KOG0069 Glyoxylate/hydroxypyru 20.6 7.9E+02 0.017 23.9 9.4 106 219-362 162-268 (336)
292 PF04493 Endonuclease_5: Endon 20.1 1.1E+02 0.0025 27.3 3.3 40 46-88 77-123 (206)
No 1
>PLN02555 limonoid glucosyltransferase
Probab=100.00 E-value=1.6e-67 Score=526.70 Aligned_cols=387 Identities=44% Similarity=0.830 Sum_probs=316.8
Q ss_pred CeEEEEcCCCCCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEecch
Q 045998 13 TVQFVFFPDGLSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWIQA 92 (408)
Q Consensus 13 gi~f~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~ 92 (408)
.++|..+|||+|++.+...+...++..+.+.+.+.++++++.+..++.+++|||+|.++.|+.++|+++|||.+.||+++
T Consensus 68 ~i~~~~~pdglp~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~pv~ciV~D~~~~wa~~vA~~~gIP~~~F~t~~ 147 (480)
T PLN02555 68 FIRFEFFEDGWAEDDPRRQDLDLYLPQLELVGKREIPNLVKRYAEQGRPVSCLINNPFIPWVCDVAEELGIPSAVLWVQS 147 (480)
T ss_pred eEEEeeCCCCCCCCcccccCHHHHHHHHHHhhhHHHHHHHHHHhccCCCceEEEECCcchHHHHHHHHcCCCeEEeeccc
Confidence 37888899999988654445666777777778899999998875333445999999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCCcccCCCCCCCCCh-----------hHHhhhcccceEEccchhhccH
Q 045998 93 CAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPSLLVNELPSSLLPS-----------DFVQKLDKVKWILGSSFYELEE 161 (408)
Q Consensus 93 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~lvnt~~~le~ 161 (408)
++.++.++++..+....+....++..+.+||+|.++..++++++... +.+....+++++++|||++||+
T Consensus 148 a~~~~~~~~~~~~~~~~~~~~~~~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~a~~vlvNTf~eLE~ 227 (480)
T PLN02555 148 CACFSAYYHYYHGLVPFPTETEPEIDVQLPCMPLLKYDEIPSFLHPSSPYPFLRRAILGQYKNLDKPFCILIDTFQELEK 227 (480)
T ss_pred HHHHHHHHHHhhcCCCcccccCCCceeecCCCCCcCHhhCcccccCCCCchHHHHHHHHHHHhcccCCEEEEEchHHHhH
Confidence 99999888775432222211112233568999888889998876421 2334456788999999999999
Q ss_pred HHHHHhhccCCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcccCCHHHHHHH
Q 045998 162 NVVASMATFTPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSI 241 (408)
Q Consensus 162 ~~~~~~~~~~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~ 241 (408)
.+++.++...|++.|||+++.... .+...|.++++.+++|+ +||+++++++||||||||+..++.+++.++
T Consensus 228 ~~~~~l~~~~~v~~iGPl~~~~~~----~~~~~~~~~~~~~~~~~-----~wLd~~~~~sVvyvsfGS~~~~~~~q~~el 298 (480)
T PLN02555 228 EIIDYMSKLCPIKPVGPLFKMAKT----PNSDVKGDISKPADDCI-----EWLDSKPPSSVVYISFGTVVYLKQEQIDEI 298 (480)
T ss_pred HHHHHHhhCCCEEEeCcccCcccc----ccccccccccccchhHH-----HHHhCCCCCceeEEEeccccCCCHHHHHHH
Confidence 999998765569999999764210 00111122233345677 999999889999999999999999999999
Q ss_pred HHHHHhCCCCEEEEEecCCc---ccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCce
Q 045998 242 AAALINTKRPFLWVIRSQEN---KEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPV 318 (408)
Q Consensus 242 ~~al~~~~~~~iw~~~~~~~---~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~ 318 (408)
+.+|+.++++|||+++.... .....+|+++.+++++|+++++|+||.+||+|+++++|||||||||++||+++||||
T Consensus 299 a~~l~~~~~~flW~~~~~~~~~~~~~~~lp~~~~~~~~~~g~v~~W~PQ~~iL~H~~v~~FvtH~G~nS~~Eai~~GVP~ 378 (480)
T PLN02555 299 AYGVLNSGVSFLWVMRPPHKDSGVEPHVLPEEFLEKAGDKGKIVQWCPQEKVLAHPSVACFVTHCGWNSTMEALSSGVPV 378 (480)
T ss_pred HHHHHhcCCeEEEEEecCcccccchhhcCChhhhhhcCCceEEEecCCHHHHhCCCccCeEEecCCcchHHHHHHcCCCE
Confidence 99999999999999984311 111258889999999999999999999999999999999999999999999999999
Q ss_pred eeccCCCChhhhHHhhhceeeeEEEeecC--CCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 045998 319 IAYPEWTDQPTDAKLLVDVFKIGVRMRNE--EDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDA 396 (408)
Q Consensus 319 i~~P~~~DQ~~na~~v~~~~g~G~~l~~~--~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~ 396 (408)
|+||+++||+.||+++++.||+|+++... ..+.+++++|.++|+++|.+++++.+|+||++|++++++|+++||||.+
T Consensus 379 l~~P~~~DQ~~Na~~~~~~~gvGv~l~~~~~~~~~v~~~~v~~~v~~vm~~~~g~~~r~ra~~l~~~a~~A~~egGSS~~ 458 (480)
T PLN02555 379 VCFPQWGDQVTDAVYLVDVFKTGVRLCRGEAENKLITREEVAECLLEATVGEKAAELKQNALKWKEEAEAAVAEGGSSDR 458 (480)
T ss_pred EeCCCccccHHHHHHHHHHhCceEEccCCccccCcCcHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHH
Confidence 99999999999999999867999999531 1257899999999999998888899999999999999999999999999
Q ss_pred HHHHHHHHHHhC
Q 045998 397 NINRFINEITRK 408 (408)
Q Consensus 397 ~~~~~v~~l~~~ 408 (408)
++++||++++++
T Consensus 459 ~l~~~v~~i~~~ 470 (480)
T PLN02555 459 NFQEFVDKLVRK 470 (480)
T ss_pred HHHHHHHHHHhc
Confidence 999999999875
No 2
>PLN02173 UDP-glucosyl transferase family protein
Probab=100.00 E-value=2.5e-66 Score=513.97 Aligned_cols=379 Identities=35% Similarity=0.713 Sum_probs=308.3
Q ss_pred CCeEEEEcCCCCCCC-cccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEec
Q 045998 12 STVQFVFFPDGLSDD-FDRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 12 ~gi~f~~i~~glp~~-~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~ 90 (408)
.+|+|+.+|||+|++ .+.++++..++..+.+.+.+.++++++.+..+..+++|||+|.|++|+.++|+++|||++.||+
T Consensus 54 ~~i~~~~ipdglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~Pv~cvV~D~f~~Wa~dVA~elgIP~v~F~~ 133 (449)
T PLN02173 54 SPISIATISDGYDQGGFSSAGSVPEYLQNFKTFGSKTVADIIRKHQSTDNPITCIVYDSFMPWALDLAREFGLAAAPFFT 133 (449)
T ss_pred CCEEEEEcCCCCCCcccccccCHHHHHHHHHHhhhHHHHHHHHHhhccCCCceEEEECCcchhHHHHHHHhCCCEEEEec
Confidence 469999999999984 3444567678888877889999999988753223349999999999999999999999999999
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCCcccCCCCCCCCCh-----------hHHhhhcccceEEccchhhc
Q 045998 91 QACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPSLLVNELPSSLLPS-----------DFVQKLDKVKWILGSSFYEL 159 (408)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~lvnt~~~l 159 (408)
++++.+..+++..... .+..+.+|++|+++..++++++... +.+....+++.+++|||++|
T Consensus 134 ~~a~~~~~~~~~~~~~--------~~~~~~~pg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eL 205 (449)
T PLN02173 134 QSCAVNYINYLSYINN--------GSLTLPIKDLPLLELQDLPTFVTPTGSHLAYFEMVLQQFTNFDKADFVLVNSFHDL 205 (449)
T ss_pred hHHHHHHHHHhHHhcc--------CCccCCCCCCCCCChhhCChhhcCCCCchHHHHHHHHHHhhhccCCEEEEeCHHHh
Confidence 9888876655432111 0122457898878888888766421 22344567899999999999
Q ss_pred cHHHHHHhhccCCceeeCCCCCccc-cCCCCCCCCCCCCCc--ccccccchhhhhhhhccCCCCceEEEecCCcccCCHH
Q 045998 160 EENVVASMATFTPIIPVGPLVSPFM-LGKQENATAPSLDMW--STAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLSQN 236 (408)
Q Consensus 160 e~~~~~~~~~~~p~~~vGpl~~~~~-~~~~~~~~~~g~~~~--~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~ 236 (408)
|+.++++++..+|++.|||+++... ......+...+.+++ +++++|+ +||++++++|||||||||+..++.+
T Consensus 206 E~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~c~-----~WLd~~~~~svvyvsfGS~~~~~~~ 280 (449)
T PLN02173 206 DLHENELLSKVCPVLTIGPTVPSMYLDQQIKSDNDYDLNLFDLKEAALCT-----DWLDKRPQGSVVYIAFGSMAKLSSE 280 (449)
T ss_pred hHHHHHHHHhcCCeeEEcccCchhhccccccccccccccccccccchHHH-----HHHhcCCCCceEEEEecccccCCHH
Confidence 9999999976567999999976421 000000011111222 2234588 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhc-CCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcC
Q 045998 237 QIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEET-KDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAG 315 (408)
Q Consensus 237 ~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~-~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~G 315 (408)
++.+++.+| .+++|+|+++..... .+|++|.+++ ++|+++.+|+||.+||+|+++++|||||||||++||+++|
T Consensus 281 ~~~ela~gL--s~~~flWvvr~~~~~---~lp~~~~~~~~~~~~~i~~W~PQ~~iL~H~~v~~FvtHcGwnS~~Eai~~G 355 (449)
T PLN02173 281 QMEEIASAI--SNFSYLWVVRASEES---KLPPGFLETVDKDKSLVLKWSPQLQVLSNKAIGCFMTHCGWNSTMEGLSLG 355 (449)
T ss_pred HHHHHHHHh--cCCCEEEEEeccchh---cccchHHHhhcCCceEEeCCCCHHHHhCCCccceEEecCccchHHHHHHcC
Confidence 999999999 788899999864333 5888998887 6889999999999999999999999999999999999999
Q ss_pred CceeeccCCCChhhhHHhhhceeeeEEEeecCC-CCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCCh
Q 045998 316 VPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEE-DGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSS 394 (408)
Q Consensus 316 vP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~-~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s 394 (408)
||||+||+++||+.||+++++.||+|+.+.... ++.+++++|+++|+++|.+++++.+|+||+++++.+++|+.+||||
T Consensus 356 VP~l~~P~~~DQ~~Na~~v~~~~g~Gv~v~~~~~~~~~~~e~v~~av~~vm~~~~~~~~r~~a~~~~~~a~~Av~~gGSS 435 (449)
T PLN02173 356 VPMVAMPQWTDQPMNAKYIQDVWKVGVRVKAEKESGIAKREEIEFSIKEVMEGEKSKEMKENAGKWRDLAVKSLSEGGST 435 (449)
T ss_pred CCEEecCchhcchHHHHHHHHHhCceEEEeecccCCcccHHHHHHHHHHHhcCChHHHHHHHHHHHHHHHHHHhcCCCcH
Confidence 999999999999999999998679999996522 2357999999999999998888999999999999999999999999
Q ss_pred HHHHHHHHHHHHhC
Q 045998 395 DANINRFINEITRK 408 (408)
Q Consensus 395 ~~~~~~~v~~l~~~ 408 (408)
.+++++||+++.-|
T Consensus 436 ~~~l~~~v~~~~~~ 449 (449)
T PLN02173 436 DININTFVSKIQIK 449 (449)
T ss_pred HHHHHHHHHHhccC
Confidence 99999999998654
No 3
>PLN02410 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=3.1e-66 Score=515.36 Aligned_cols=378 Identities=28% Similarity=0.464 Sum_probs=306.8
Q ss_pred CCeEEEEcCCCCCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhc-CCCCccEEEECCCCCcHHHHHHHcCCCeEEEec
Q 045998 12 STVQFVFFPDGLSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSN-NDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 12 ~gi~f~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~-~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~ 90 (408)
.+|+|+.+|+|+|++.....+...++..+.+.+.+.++++++++.. .+.+++|||+|.++.|+.++|+++|||++.||+
T Consensus 55 ~~i~~~~ip~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~l~~~~~~p~~cVI~D~f~~Wa~dvA~~lgIP~v~F~t 134 (451)
T PLN02410 55 TDFQFVTIPESLPESDFKNLGPIEFLHKLNKECQVSFKDCLGQLVLQQGNEIACVVYDEFMYFAEAAAKEFKLPNVIFST 134 (451)
T ss_pred CCeEEEeCCCCCCcccccccCHHHHHHHHHHHhHHHHHHHHHHHHhccCCCcEEEEECCcchHHHHHHHHcCCCEEEEEc
Confidence 4799999999999853222234567777777788889999988742 234679999999999999999999999999999
Q ss_pred chhHHHHHHHHhhcCCC---CCCCCCC-CCccccCCCCCCcccCCCCCCCCCh--------hHHhhhcccceEEccchhh
Q 045998 91 QACAAYYIYYHYFKHPQ---LFPSLEN-PNEAVHLPAMPSLLVNELPSSLLPS--------DFVQKLDKVKWILGSSFYE 158 (408)
Q Consensus 91 ~~~~~~~~~~~~~~~~~---~~~~~~~-~~~~~~~p~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~lvnt~~~ 158 (408)
++++.++.++++..... ..+.... .+....+|++++++..+++.+.... .......+++++++|||++
T Consensus 135 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~e 214 (451)
T PLN02410 135 TSATAFVCRSVFDKLYANNVLAPLKEPKGQQNELVPEFHPLRCKDFPVSHWASLESIMELYRNTVDKRTASSVIINTASC 214 (451)
T ss_pred cCHHHHHHHHHHHHHHhccCCCCccccccCccccCCCCCCCChHHCcchhcCCcHHHHHHHHHHhhcccCCEEEEeChHH
Confidence 99999887766421110 0111101 1122358898877777887654211 1111235688999999999
Q ss_pred ccHHHHHHhhcc--CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcccCCHH
Q 045998 159 LEENVVASMATF--TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLSQN 236 (408)
Q Consensus 159 le~~~~~~~~~~--~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~ 236 (408)
||+.++++++.. +|+++|||++.... .+..+.+.+.+|+ +|||+++++|||||||||...++.+
T Consensus 215 LE~~~~~~l~~~~~~~v~~vGpl~~~~~---------~~~~~~~~~~~~~-----~wLd~~~~~sVvyvsfGS~~~~~~~ 280 (451)
T PLN02410 215 LESSSLSRLQQQLQIPVYPIGPLHLVAS---------APTSLLEENKSCI-----EWLNKQKKNSVIFVSLGSLALMEIN 280 (451)
T ss_pred hhHHHHHHHHhccCCCEEEecccccccC---------CCccccccchHHH-----HHHHhCCCCcEEEEEccccccCCHH
Confidence 999999999764 46999999975421 0112222334577 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCEEEEEecCCc---ccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHH
Q 045998 237 QIDSIAAALINTKRPFLWVIRSQEN---KEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVA 313 (408)
Q Consensus 237 ~~~~~~~al~~~~~~~iw~~~~~~~---~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~ 313 (408)
++++++.+|+.++++|||+++.... .....+|++|.+++++|+++++|+||.+||+|+++++|||||||||++||++
T Consensus 281 q~~ela~gLe~s~~~FlWv~r~~~~~~~~~~~~lp~~f~er~~~~g~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~Ea~~ 360 (451)
T PLN02410 281 EVMETASGLDSSNQQFLWVIRPGSVRGSEWIESLPKEFSKIISGRGYIVKWAPQKEVLSHPAVGGFWSHCGWNSTLESIG 360 (451)
T ss_pred HHHHHHHHHHhcCCCeEEEEccCcccccchhhcCChhHHHhccCCeEEEccCCHHHHhCCCccCeeeecCchhHHHHHHH
Confidence 9999999999999999999985321 1011489999999999999999999999999999999999999999999999
Q ss_pred cCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCC
Q 045998 314 AGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGS 393 (408)
Q Consensus 314 ~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~ 393 (408)
+|||||+||+++||+.||+++++.||+|+.+. +.+++++|+++|+++|.++++++||+||+++++.+++|+.+|||
T Consensus 361 ~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~----~~~~~~~v~~av~~lm~~~~~~~~r~~a~~l~~~~~~a~~~gGs 436 (451)
T PLN02410 361 EGVPMICKPFSSDQKVNARYLECVWKIGIQVE----GDLDRGAVERAVKRLMVEEEGEEMRKRAISLKEQLRASVISGGS 436 (451)
T ss_pred cCCCEEeccccccCHHHHHHHHHHhCeeEEeC----CcccHHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 99999999999999999999987679999996 57899999999999998877889999999999999999999999
Q ss_pred hHHHHHHHHHHHHh
Q 045998 394 SDANINRFINEITR 407 (408)
Q Consensus 394 s~~~~~~~v~~l~~ 407 (408)
|.+++++||++++.
T Consensus 437 S~~~l~~fv~~~~~ 450 (451)
T PLN02410 437 SHNSLEEFVHFMRT 450 (451)
T ss_pred HHHHHHHHHHHHHh
Confidence 99999999999864
No 4
>PLN02152 indole-3-acetate beta-glucosyltransferase
Probab=100.00 E-value=5.1e-65 Score=505.47 Aligned_cols=377 Identities=37% Similarity=0.714 Sum_probs=305.1
Q ss_pred CCeEEEEcCCCCCCCccc-ccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEec
Q 045998 12 STVQFVFFPDGLSDDFDR-IKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 12 ~gi~f~~i~~glp~~~~~-~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~ 90 (408)
.+|+|+.||||+|++.+. +++...++..+.+.+.+.++++++++...+.+++|||+|.+++|+.++|+++|||++.||+
T Consensus 56 ~~i~~~~i~dglp~g~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~pv~ciV~D~~~~wa~dvA~~lgIP~~~f~t 135 (455)
T PLN02152 56 ENLSFLTFSDGFDDGVISNTDDVQNRLVNFERNGDKALSDFIEANLNGDSPVTCLIYTILPNWAPKVARRFHLPSVLLWI 135 (455)
T ss_pred CCEEEEEcCCCCCCccccccccHHHHHHHHHHhccHHHHHHHHHhhccCCCceEEEECCccHhHHHHHHHhCCCEEEEEC
Confidence 379999999999988543 3566667777778889999999998754334569999999999999999999999999999
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCCcccCCCCCCCCCh-----------hHHhhhcc--cceEEccchh
Q 045998 91 QACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPSLLVNELPSSLLPS-----------DFVQKLDK--VKWILGSSFY 157 (408)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~-----------~~~~~~~~--~~~~lvnt~~ 157 (408)
++++.++.+++++... ...+.+|++|++...++|+++... +.++.+.+ ++.+++|||+
T Consensus 136 ~~a~~~~~~~~~~~~~---------~~~~~iPglp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~ 206 (455)
T PLN02152 136 QPAFVFDIYYNYSTGN---------NSVFEFPNLPSLEIRDLPSFLSPSNTNKAAQAVYQELMEFLKEESNPKILVNTFD 206 (455)
T ss_pred ccHHHHHHHHHhhccC---------CCeeecCCCCCCchHHCchhhcCCCCchhHHHHHHHHHHHhhhccCCEEEEeChH
Confidence 9999999887764221 113458898878888888876431 22333322 4699999999
Q ss_pred hccHHHHHHhhccCCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcccCCHHH
Q 045998 158 ELEENVVASMATFTPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLSQNQ 237 (408)
Q Consensus 158 ~le~~~~~~~~~~~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~ 237 (408)
+||+.++++++. .|++.|||+++..... ......+.++.+.+.+|+ +|||+++++|||||||||+..++.++
T Consensus 207 eLE~~~~~~l~~-~~v~~VGPL~~~~~~~--~~~~~~~~~~~~~~~~~~-----~wLd~~~~~sVvyvsfGS~~~l~~~q 278 (455)
T PLN02152 207 SLEPEFLTAIPN-IEMVAVGPLLPAEIFT--GSESGKDLSVRDQSSSYT-----LWLDSKTESSVIYVSFGTMVELSKKQ 278 (455)
T ss_pred HhhHHHHHhhhc-CCEEEEcccCcccccc--ccccCccccccccchHHH-----HHhhCCCCCceEEEEecccccCCHHH
Confidence 999999998865 3799999997642100 000000011112233466 99999988999999999999999999
Q ss_pred HHHHHHHHHhCCCCEEEEEecCCc-------cc--ccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchH
Q 045998 238 IDSIAAALINTKRPFLWVIRSQEN-------KE--GGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNST 308 (408)
Q Consensus 238 ~~~~~~al~~~~~~~iw~~~~~~~-------~~--~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~ 308 (408)
+++++.+|+.++++|||+++.... .. ...+|++|.+++++|+++.+|+||.+||+|+++|+|||||||||+
T Consensus 279 ~~ela~gL~~s~~~flWv~r~~~~~~~~~~~~~~~~~~~~~~f~e~~~~~g~v~~W~PQ~~iL~h~~vg~fvtH~G~nS~ 358 (455)
T PLN02152 279 IEELARALIEGKRPFLWVITDKLNREAKIEGEEETEIEKIAGFRHELEEVGMIVSWCSQIEVLRHRAVGCFVTHCGWSSS 358 (455)
T ss_pred HHHHHHHHHHcCCCeEEEEecCcccccccccccccccccchhHHHhccCCeEEEeeCCHHHHhCCcccceEEeeCCcccH
Confidence 999999999999999999985311 00 012478999999999999999999999999999999999999999
Q ss_pred HHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 045998 309 LETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKAL 388 (408)
Q Consensus 309 ~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 388 (408)
+||+++|||||++|+++||+.||+++++.||+|+.+..+.++.+++++|+++|+++|++ ++..||+||+++++.+++++
T Consensus 359 ~Ea~~~GvP~l~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~e~l~~av~~vm~~-~~~~~r~~a~~~~~~~~~a~ 437 (455)
T PLN02152 359 LESLVLGVPVVAFPMWSDQPANAKLLEEIWKTGVRVRENSEGLVERGEIRRCLEAVMEE-KSVELRESAEKWKRLAIEAG 437 (455)
T ss_pred HHHHHcCCCEEeccccccchHHHHHHHHHhCceEEeecCcCCcCcHHHHHHHHHHHHhh-hHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999986788888864323467999999999999974 35679999999999999999
Q ss_pred hcCCChHHHHHHHHHHHH
Q 045998 389 EDGGSSDANINRFINEIT 406 (408)
Q Consensus 389 ~~gg~s~~~~~~~v~~l~ 406 (408)
++||||.+++++||++|+
T Consensus 438 ~~ggsS~~nl~~li~~i~ 455 (455)
T PLN02152 438 GEGGSSDKNVEAFVKTLC 455 (455)
T ss_pred cCCCcHHHHHHHHHHHhC
Confidence 999999999999999874
No 5
>PLN02210 UDP-glucosyl transferase
Probab=100.00 E-value=1.3e-64 Score=505.46 Aligned_cols=380 Identities=54% Similarity=0.982 Sum_probs=302.3
Q ss_pred CCeEEEEcCCCCCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEecc
Q 045998 12 STVQFVFFPDGLSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWIQ 91 (408)
Q Consensus 12 ~gi~f~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 91 (408)
..+++..+|+|+|++.+ .+...++..+.+.+.+.+++++++ .++||||+|.++.|+..+|+++|||++.||++
T Consensus 61 ~~~~~~~~~~glp~~~~--~~~~~~~~~~~~~~~~~l~~~l~~-----~~~~~vI~D~~~~w~~~vA~~lgIP~~~f~~~ 133 (456)
T PLN02210 61 RPVDLVFFSDGLPKDDP--RAPETLLKSLNKVGAKNLSKIIEE-----KRYSCIISSPFTPWVPAVAAAHNIPCAILWIQ 133 (456)
T ss_pred CceEEEECCCCCCCCcc--cCHHHHHHHHHHhhhHHHHHHHhc-----CCCcEEEECCcchhHHHHHHHhCCCEEEEecc
Confidence 46888888999998763 345566677766666677776665 36899999999999999999999999999999
Q ss_pred hhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCCcccCCCCCCCCCh----------hHHhhhcccceEEccchhhccH
Q 045998 92 ACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPSLLVNELPSSLLPS----------DFVQKLDKVKWILGSSFYELEE 161 (408)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~lvnt~~~le~ 161 (408)
+++.++++++++......+...+....+.+|+++.+...++++++... +......+++++++|||.++|+
T Consensus 134 sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pgl~~~~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE~ 213 (456)
T PLN02210 134 ACGAYSVYYRYYMKTNSFPDLEDLNQTVELPALPLLEVRDLPSFMLPSGGAHFNNLMAEFADCLRYVKWVLVNSFYELES 213 (456)
T ss_pred cHHHHHHHHhhhhccCCCCcccccCCeeeCCCCCCCChhhCChhhhcCCchHHHHHHHHHHHhcccCCEEEEeCHHHHhH
Confidence 999999887654322222211111123458888777888888755322 2223345678999999999999
Q ss_pred HHHHHhhccCCceeeCCCCCccccCCCCCC--CCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcccCCHHHHH
Q 045998 162 NVVASMATFTPIIPVGPLVSPFMLGKQENA--TAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLSQNQID 239 (408)
Q Consensus 162 ~~~~~~~~~~p~~~vGpl~~~~~~~~~~~~--~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~ 239 (408)
.+++.+++.+++++|||+++.........+ ...+.++++++.+|+ +||++++++|||||||||....+.++++
T Consensus 214 ~~~~~l~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~wld~~~~~svvyvsfGS~~~~~~~~~~ 288 (456)
T PLN02210 214 EIIESMADLKPVIPIGPLVSPFLLGDDEEETLDGKNLDMCKSDDCCM-----EWLDKQARSSVVYISFGSMLESLENQVE 288 (456)
T ss_pred HHHHHHhhcCCEEEEcccCchhhcCcccccccccccccccccchHHH-----HHHhCCCCCceEEEEecccccCCHHHHH
Confidence 999998765679999999853210000000 011112334455678 9999998899999999999999999999
Q ss_pred HHHHHHHhCCCCEEEEEecCCcccccccchhhhhhc-CCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCce
Q 045998 240 SIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEET-KDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPV 318 (408)
Q Consensus 240 ~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~-~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~ 318 (408)
+++.+|+.++++|||+++..... ..++.+.++. ++|+++++|+||.+||+|+++|+|||||||||++||+++||||
T Consensus 289 e~a~~l~~~~~~flw~~~~~~~~---~~~~~~~~~~~~~~g~v~~w~PQ~~iL~h~~vg~FitH~G~nS~~Eai~~GVP~ 365 (456)
T PLN02210 289 TIAKALKNRGVPFLWVIRPKEKA---QNVQVLQEMVKEGQGVVLEWSPQEKILSHMAISCFVTHCGWNSTIETVVAGVPV 365 (456)
T ss_pred HHHHHHHhCCCCEEEEEeCCccc---cchhhHHhhccCCCeEEEecCCHHHHhcCcCcCeEEeeCCcccHHHHHHcCCCE
Confidence 99999999999999999854222 2345566666 4889899999999999999999999999999999999999999
Q ss_pred eeccCCCChhhhHHhhhceeeeEEEeecCC-CCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHH
Q 045998 319 IAYPEWTDQPTDAKLLVDVFKIGVRMRNEE-DGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDAN 397 (408)
Q Consensus 319 i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~-~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~ 397 (408)
|+||+++||+.||+++++.+|+|+++.... ++.+++++|+++|+++|.+++|+++|+||++|++.+++|+.+||||.++
T Consensus 366 v~~P~~~DQ~~na~~~~~~~g~G~~l~~~~~~~~~~~~~l~~av~~~m~~~~g~~~r~~a~~l~~~a~~Av~~gGSS~~~ 445 (456)
T PLN02210 366 VAYPSWTDQPIDARLLVDVFGIGVRMRNDAVDGELKVEEVERCIEAVTEGPAAADIRRRAAELKHVARLALAPGGSSARN 445 (456)
T ss_pred EecccccccHHHHHHHHHHhCeEEEEeccccCCcCCHHHHHHHHHHHhcCchHHHHHHHHHHHHHHHHHHhcCCCcHHHH
Confidence 999999999999999986589999997421 2479999999999999988778899999999999999999999999999
Q ss_pred HHHHHHHHH
Q 045998 398 INRFINEIT 406 (408)
Q Consensus 398 ~~~~v~~l~ 406 (408)
+++||++++
T Consensus 446 l~~~v~~~~ 454 (456)
T PLN02210 446 LDLFISDIT 454 (456)
T ss_pred HHHHHHHHh
Confidence 999999985
No 6
>PLN02207 UDP-glycosyltransferase
Probab=100.00 E-value=6.1e-64 Score=498.76 Aligned_cols=382 Identities=24% Similarity=0.436 Sum_probs=294.9
Q ss_pred CCeEEEEcCCCCCCCc-ccccCHHHHHHHHHHHhhH----HHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeE
Q 045998 12 STVQFVFFPDGLSDDF-DRIKYVGAFIESLQKVGSK----NLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCA 86 (408)
Q Consensus 12 ~gi~f~~i~~glp~~~-~~~~~~~~~~~~~~~~~~~----~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v 86 (408)
.+|+|+.|||+.+.+. ....+...++..+.+.+.+ .++++++++..++.+++|||+|.++.|+.++|+++|||++
T Consensus 61 ~~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~pv~cvV~D~~~~w~~~vA~~~gip~~ 140 (468)
T PLN02207 61 PFVRFIDVPELEEKPTLGGTQSVEAYVYDVIEKNIPLVRNIVMDILSSLALDGVKVKGFVADFFCLPMIDVAKDVSLPFY 140 (468)
T ss_pred CCeEEEEeCCCCCCCccccccCHHHHHHHHHHhcchhHHHHHHHHHHHhccCCCCeEEEEECCcchHHHHHHHHhCCCEE
Confidence 3699999997643111 1223455455444445544 4444444432212245999999999999999999999999
Q ss_pred EEecchhHHHHHHHHhhcCCCC---CCCCCCCCccccCCCC-CCcccCCCCCCCCCh-------hHHhhhcccceEEccc
Q 045998 87 VLWIQACAAYYIYYHYFKHPQL---FPSLENPNEAVHLPAM-PSLLVNELPSSLLPS-------DFVQKLDKVKWILGSS 155 (408)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~p~~-~~~~~~~~~~~~~~~-------~~~~~~~~~~~~lvnt 155 (408)
.||++++..++++++....... .+.. ..+..+.+||+ |+++..++++++... +....+.+++++++||
T Consensus 141 ~f~~~~a~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~vPgl~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~vlvNt 219 (468)
T PLN02207 141 VFLTTNSGFLAMMQYLADRHSKDTSVFVR-NSEEMLSIPGFVNPVPANVLPSALFVEDGYDAYVKLAILFTKANGILVNS 219 (468)
T ss_pred EEECccHHHHHHHHHhhhccccccccCcC-CCCCeEECCCCCCCCChHHCcchhcCCccHHHHHHHHHhcccCCEEEEEc
Confidence 9999999888887766322111 1000 11133568998 578889998766431 3334456789999999
Q ss_pred hhhccHHHHHHhhc--c-CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCccc
Q 045998 156 FYELEENVVASMAT--F-TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLV 232 (408)
Q Consensus 156 ~~~le~~~~~~~~~--~-~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~ 232 (408)
|++||+++++.++. . ++++.|||++.... ...+ ..+. ..+++|+ +||++++++|||||||||...
T Consensus 220 f~~LE~~~~~~~~~~~~~p~v~~VGPl~~~~~-~~~~-----~~~~-~~~~~~~-----~WLd~~~~~sVVyvSfGS~~~ 287 (468)
T PLN02207 220 SFDIEPYSVNHFLDEQNYPSVYAVGPIFDLKA-QPHP-----EQDL-ARRDELM-----KWLDDQPEASVVFLCFGSMGR 287 (468)
T ss_pred hHHHhHHHHHHHHhccCCCcEEEecCCccccc-CCCC-----cccc-chhhHHH-----HHHhcCCCCcEEEEEeccCcC
Confidence 99999999888843 3 45999999976421 0000 0001 1123455 999999889999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHH
Q 045998 233 LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETV 312 (408)
Q Consensus 233 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal 312 (408)
++.+++++++.+|+.++++|||+++.........+|++|.+++++|+++++|+||.+||+|+++|+|||||||||++||+
T Consensus 288 ~~~~q~~ela~~l~~~~~~flW~~r~~~~~~~~~lp~~f~er~~~~g~i~~W~PQ~~IL~H~~vg~FvTH~GwnS~~Eai 367 (468)
T PLN02207 288 LRGPLVKEIAHGLELCQYRFLWSLRTEEVTNDDLLPEGFLDRVSGRGMICGWSPQVEILAHKAVGGFVSHCGWNSIVESL 367 (468)
T ss_pred CCHHHHHHHHHHHHHCCCcEEEEEeCCCccccccCCHHHHhhcCCCeEEEEeCCHHHHhcccccceeeecCccccHHHHH
Confidence 99999999999999999999999995322111268999999999999999999999999999999999999999999999
Q ss_pred HcCCceeeccCCCChhhhHHhhhceeeeEEEeecC----CCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHH
Q 045998 313 AAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNE----EDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKAL 388 (408)
Q Consensus 313 ~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~----~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~ 388 (408)
++|||||+||+++||+.||+++++++|+|+++..+ .++.+++++|+++|+++|.+ ++++||+||+++++.+++|+
T Consensus 368 ~~GVP~l~~P~~~DQ~~Na~~~~~~~gvGv~~~~~~~~~~~~~v~~e~i~~av~~vm~~-~~~~~r~~a~~l~~~a~~A~ 446 (468)
T PLN02207 368 WFGVPIVTWPMYAEQQLNAFLMVKELKLAVELKLDYRVHSDEIVNANEIETAIRCVMNK-DNNVVRKRVMDISQMIQRAT 446 (468)
T ss_pred HcCCCEEecCccccchhhHHHHHHHhCceEEEecccccccCCcccHHHHHHHHHHHHhc-chHHHHHHHHHHHHHHHHHh
Confidence 99999999999999999999887769999988521 12356999999999999973 36899999999999999999
Q ss_pred hcCCChHHHHHHHHHHHHh
Q 045998 389 EDGGSSDANINRFINEITR 407 (408)
Q Consensus 389 ~~gg~s~~~~~~~v~~l~~ 407 (408)
++||||.+++++||++++.
T Consensus 447 ~~GGSS~~~l~~~v~~~~~ 465 (468)
T PLN02207 447 KNGGSSFAAIEKFIHDVIG 465 (468)
T ss_pred cCCCcHHHHHHHHHHHHHh
Confidence 9999999999999999875
No 7
>PLN03015 UDP-glucosyl transferase
Probab=100.00 E-value=4.3e-63 Score=491.06 Aligned_cols=373 Identities=22% Similarity=0.368 Sum_probs=294.6
Q ss_pred CeEEEEcCCCCCCCc-ccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCC-eEEEec
Q 045998 13 TVQFVFFPDGLSDDF-DRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIP-CAVLWI 90 (408)
Q Consensus 13 gi~f~~i~~glp~~~-~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP-~v~~~~ 90 (408)
+|+|+.+|++..++. ....+....+..+.+.+.+.++++++++. .+++|||+|.|++|+.++|+++||| .+.|++
T Consensus 61 ~i~~~~lp~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~---~~~~ciV~D~f~~w~~~vA~~lgIP~~~~f~~ 137 (470)
T PLN03015 61 TCQITEIPSVDVDNLVEPDATIFTKMVVKMRAMKPAVRDAVKSMK---RKPTVMIVDFFGTALMSIADDVGVTAKYVYIP 137 (470)
T ss_pred ceEEEECCCCccccCCCCCccHHHHHHHHHHhchHHHHHHHHhcC---CCCeEEEEcCCcHHHHHHHHHcCCCEEEEEcC
Confidence 699999985443331 10013333344455577889999998874 3679999999999999999999999 588888
Q ss_pred chhHHHHHHHHhhcCCCCCCCC-CCCCccccCCCCCCcccCCCCCCCC-Ch--------hHHhhhcccceEEccchhhcc
Q 045998 91 QACAAYYIYYHYFKHPQLFPSL-ENPNEAVHLPAMPSLLVNELPSSLL-PS--------DFVQKLDKVKWILGSSFYELE 160 (408)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~~-~~--------~~~~~~~~~~~~lvnt~~~le 160 (408)
++++.+..++++.......+.. ......+.+||+|+++..+++.++. +. ..+..+.+++++++|||++||
T Consensus 138 ~~a~~~~~~~~l~~~~~~~~~~~~~~~~~~~vPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~eLE 217 (470)
T PLN03015 138 SHAWFLAVMVYLPVLDTVVEGEYVDIKEPLKIPGCKPVGPKELMETMLDRSDQQYKECVRSGLEVPMSDGVLVNTWEELQ 217 (470)
T ss_pred HHHHHHHHHHhhhhhhcccccccCCCCCeeeCCCCCCCChHHCCHhhcCCCcHHHHHHHHHHHhcccCCEEEEechHHHh
Confidence 8887776666653211111110 0111235689998888888886442 21 223345678999999999999
Q ss_pred HHHHHHhhcc--------CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCccc
Q 045998 161 ENVVASMATF--------TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLV 232 (408)
Q Consensus 161 ~~~~~~~~~~--------~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~ 232 (408)
+.+++.++.. +|++.|||+++.. .+. +.+.+|+ +|||+++++|||||||||...
T Consensus 218 ~~~~~~l~~~~~~~~~~~~~v~~VGPl~~~~------------~~~-~~~~~~~-----~WLd~~~~~sVvyvsFGS~~~ 279 (470)
T PLN03015 218 GNTLAALREDMELNRVMKVPVYPIGPIVRTN------------VHV-EKRNSIF-----EWLDKQGERSVVYVCLGSGGT 279 (470)
T ss_pred HHHHHHHHhhcccccccCCceEEecCCCCCc------------ccc-cchHHHH-----HHHHhCCCCCEEEEECCcCCc
Confidence 9999998753 5699999997421 010 1123466 999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCC---------cc-cccccchhhhhhcCCCeEEE-ecccHHHHhcccCcceEEe
Q 045998 233 LSQNQIDSIAAALINTKRPFLWVIRSQE---------NK-EGGVLRAGFLEETKDRGLVV-KWCSQEKVLMHAAVSCFLT 301 (408)
Q Consensus 233 ~~~~~~~~~~~al~~~~~~~iw~~~~~~---------~~-~~~~lp~~~~~~~~~n~~v~-~w~pq~~lL~h~~v~~fit 301 (408)
++.+++++++.+|+.++++|||+++... .. ....+|++|.+++.++++++ +|+||.+||+|+++|+|||
T Consensus 280 ~~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~~~~~~~~lp~~f~er~~~rGl~v~~W~PQ~~vL~h~~vg~fvt 359 (470)
T PLN03015 280 LTFEQTVELAWGLELSGQRFVWVLRRPASYLGASSSDDDQVSASLPEGFLDRTRGVGLVVTQWAPQVEILSHRSIGGFLS 359 (470)
T ss_pred CCHHHHHHHHHHHHhCCCcEEEEEecCccccccccccccchhhcCChHHHHhhccCceEEEecCCHHHHhccCccCeEEe
Confidence 9999999999999999999999997421 00 11258999999999998776 9999999999999999999
Q ss_pred ccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeec-CCCCCcCHHHHHHHHHHHhcC--CcHHHHHHHHH
Q 045998 302 HCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRN-EEDGTLSIQQVQRCIDEATQG--LNATQMKKRAV 378 (408)
Q Consensus 302 HgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~-~~~~~~~~~~l~~~i~~vl~~--~~~~~~~~~a~ 378 (408)
||||||++||+++|||||+||+++||+.||+++++++|+|+++.. ..++.+++++|+++|+++|.+ ++|+.+|+||+
T Consensus 360 H~GwnS~~Eai~~GvP~v~~P~~~DQ~~na~~~~~~~gvg~~~~~~~~~~~v~~e~i~~~v~~lm~~~~eeg~~~R~ra~ 439 (470)
T PLN03015 360 HCGWSSVLESLTKGVPIVAWPLYAEQWMNATLLTEEIGVAVRTSELPSEKVIGREEVASLVRKIVAEEDEEGQKIRAKAE 439 (470)
T ss_pred cCCchhHHHHHHcCCCEEecccccchHHHHHHHHHHhCeeEEecccccCCccCHHHHHHHHHHHHccCcccHHHHHHHHH
Confidence 999999999999999999999999999999999656999999952 112479999999999999963 67899999999
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 379 AWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 379 ~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
++++.+++|+++||||.+++++|++++.
T Consensus 440 ~lk~~a~~Av~eGGSS~~nl~~~~~~~~ 467 (470)
T PLN03015 440 EVRVSSERAWSHGGSSYNSLFEWAKRCY 467 (470)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHhcc
Confidence 9999999999999999999999999864
No 8
>PLN02992 coniferyl-alcohol glucosyltransferase
Probab=100.00 E-value=4.1e-63 Score=493.75 Aligned_cols=371 Identities=28% Similarity=0.459 Sum_probs=294.4
Q ss_pred CCeEEEEcCC----CCCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEE
Q 045998 12 STVQFVFFPD----GLSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAV 87 (408)
Q Consensus 12 ~gi~f~~i~~----glp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~ 87 (408)
.+|+++.+|+ ++|+... +....+..+...+.+.++++++++. .+++|||+|.+++|+.++|+++|||++.
T Consensus 57 ~~i~~~~lp~p~~~glp~~~~---~~~~~~~~~~~~~~~~~~~~l~~~~---~~p~cvV~D~f~~Wa~dVA~elgIP~v~ 130 (481)
T PLN02992 57 TGVDIVGLPSPDISGLVDPSA---HVVTKIGVIMREAVPTLRSKIAEMH---QKPTALIVDLFGTDALCLGGEFNMLTYI 130 (481)
T ss_pred CCceEEECCCccccCCCCCCc---cHHHHHHHHHHHhHHHHHHHHHhcC---CCCeEEEECCcchhHHHHHHHcCCCEEE
Confidence 4799999974 6652221 2222333444566788888888762 3689999999999999999999999999
Q ss_pred EecchhHHHHHHHHhhcCCCCCCCC-CCCCccccCCCCCCcccCCCCCCC-CCh--------hHHhhhcccceEEccchh
Q 045998 88 LWIQACAAYYIYYHYFKHPQLFPSL-ENPNEAVHLPAMPSLLVNELPSSL-LPS--------DFVQKLDKVKWILGSSFY 157 (408)
Q Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~lvnt~~ 157 (408)
|+++++..++.+++........... ..+...+.+||+|.++..++++.+ ... +....+.+++.+++|||+
T Consensus 131 F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~a~gvlvNTf~ 210 (481)
T PLN02992 131 FIASNARFLGVSIYYPTLDKDIKEEHTVQRKPLAMPGCEPVRFEDTLDAYLVPDEPVYRDFVRHGLAYPKADGILVNTWE 210 (481)
T ss_pred EecCcHHHHHHHHhhhhhccccccccccCCCCcccCCCCccCHHHhhHhhcCCCcHHHHHHHHHHHhcccCCEEEEechH
Confidence 9999998887766543211111100 011123458898878878887533 221 333445678999999999
Q ss_pred hccHHHHHHhhcc--------CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCC
Q 045998 158 ELEENVVASMATF--------TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGS 229 (408)
Q Consensus 158 ~le~~~~~~~~~~--------~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS 229 (408)
+||+.++++++.. +|++.|||+++... . ..++++|+ +||++++++|||||||||
T Consensus 211 eLE~~~l~~l~~~~~~~~~~~~~v~~VGPl~~~~~-------~------~~~~~~c~-----~wLd~~~~~sVvyvsfGS 272 (481)
T PLN02992 211 EMEPKSLKSLQDPKLLGRVARVPVYPIGPLCRPIQ-------S------SKTDHPVL-----DWLNKQPNESVLYISFGS 272 (481)
T ss_pred HHhHHHHHHHhhccccccccCCceEEecCccCCcC-------C------CcchHHHH-----HHHHcCCCCceEEEeecc
Confidence 9999999988642 46999999975320 0 01234577 999999889999999999
Q ss_pred cccCCHHHHHHHHHHHHhCCCCEEEEEecCCc----------------c-cccccchhhhhhcCCCeEEE-ecccHHHHh
Q 045998 230 LLVLSQNQIDSIAAALINTKRPFLWVIRSQEN----------------K-EGGVLRAGFLEETKDRGLVV-KWCSQEKVL 291 (408)
Q Consensus 230 ~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~----------------~-~~~~lp~~~~~~~~~n~~v~-~w~pq~~lL 291 (408)
...++.+++++++.+|+.++++|||+++.... . ....+|++|.+|+.+++.++ +|+||.+||
T Consensus 273 ~~~l~~~q~~ela~gL~~s~~~flW~~r~~~~~~~~~~~~~~~~~~~~~~~~~~lp~~f~eR~~~rg~vv~~W~PQ~~iL 352 (481)
T PLN02992 273 GGSLSAKQLTELAWGLEMSQQRFVWVVRPPVDGSACSAYFSANGGETRDNTPEYLPEGFVSRTHDRGFVVPSWAPQAEIL 352 (481)
T ss_pred cccCCHHHHHHHHHHHHHcCCCEEEEEeCCcccccccccccCcccccccchhhhCCHHHHHHhcCCCEEEeecCCHHHHh
Confidence 99999999999999999999999999974210 0 01258999999998887666 999999999
Q ss_pred cccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHH
Q 045998 292 MHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNAT 371 (408)
Q Consensus 292 ~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~ 371 (408)
+|+++|+|||||||||++||+++|||||+||+++||+.||+++++++|+|++++.. ++.+++++|.++|+++|.+++++
T Consensus 353 ~h~~vg~FitH~G~nS~~Eal~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~-~~~~~~~~l~~av~~vm~~~~g~ 431 (481)
T PLN02992 353 AHQAVGGFLTHCGWSSTLESVVGGVPMIAWPLFAEQNMNAALLSDELGIAVRSDDP-KEVISRSKIEALVRKVMVEEEGE 431 (481)
T ss_pred CCcccCeeEecCchhHHHHHHHcCCCEEecCccchhHHHHHHHHHHhCeeEEecCC-CCcccHHHHHHHHHHHhcCCchH
Confidence 99999999999999999999999999999999999999999996339999999741 14689999999999999888888
Q ss_pred HHHHHHHHHHHHHHHHHh--cCCChHHHHHHHHHHHHh
Q 045998 372 QMKKRAVAWKEAAKKALE--DGGSSDANINRFINEITR 407 (408)
Q Consensus 372 ~~~~~a~~l~~~~~~a~~--~gg~s~~~~~~~v~~l~~ 407 (408)
.+|++|+++++.+++|+. +||||.+++++||++++|
T Consensus 432 ~~r~~a~~~~~~a~~Av~~~~GGSS~~~l~~~v~~~~~ 469 (481)
T PLN02992 432 EMRRKVKKLRDTAEMSLSIDGGGVAHESLCRVTKECQR 469 (481)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCchHHHHHHHHHHHHH
Confidence 999999999999999994 599999999999999976
No 9
>PLN00164 glucosyltransferase; Provisional
Probab=100.00 E-value=1.2e-62 Score=494.17 Aligned_cols=374 Identities=29% Similarity=0.502 Sum_probs=300.5
Q ss_pred CeEEEEcCCCC-CCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEecc
Q 045998 13 TVQFVFFPDGL-SDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWIQ 91 (408)
Q Consensus 13 gi~f~~i~~gl-p~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 91 (408)
+|+|+++|++. |++.+ +...++..+...+.+.++++++.+. .+++|||+|.|+.|+.++|+++|||++.||++
T Consensus 67 ~i~~~~lp~~~~p~~~e---~~~~~~~~~~~~~~~~l~~~L~~l~---~pv~cIV~D~f~~Wa~dVA~elgIP~v~F~t~ 140 (480)
T PLN00164 67 DIRFHHLPAVEPPTDAA---GVEEFISRYIQLHAPHVRAAIAGLS---CPVAALVVDFFCTPLLDVARELAVPAYVYFTS 140 (480)
T ss_pred CEEEEECCCCCCCCccc---cHHHHHHHHHHhhhHHHHHHHHhcC---CCceEEEECCcchhHHHHHHHhCCCEEEEECc
Confidence 69999999874 43432 3345566566677888888887762 35799999999999999999999999999999
Q ss_pred hhHHHHHHHHhhcCCCCCC--CCCCCCccccCCCCCCcccCCCCCCCCCh---------hHHhhhcccceEEccchhhcc
Q 045998 92 ACAAYYIYYHYFKHPQLFP--SLENPNEAVHLPAMPSLLVNELPSSLLPS---------DFVQKLDKVKWILGSSFYELE 160 (408)
Q Consensus 92 ~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~lvnt~~~le 160 (408)
+++.+++++++.......+ .. .....+.+||+|.++..++|.++... ...+.+.+++.+++|||++||
T Consensus 141 sA~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iPGlp~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~eLE 219 (480)
T PLN00164 141 TAAMLALMLRLPALDEEVAVEFE-EMEGAVDVPGLPPVPASSLPAPVMDKKSPNYAWFVYHGRRFMEAAGIIVNTAAELE 219 (480)
T ss_pred cHHHHHHHhhhhhhcccccCccc-ccCcceecCCCCCCChHHCCchhcCCCcHHHHHHHHHHHhhhhcCEEEEechHHhh
Confidence 9999998877643211111 11 10123458999888888888765321 223445678999999999999
Q ss_pred HHHHHHhhcc--------CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCccc
Q 045998 161 ENVVASMATF--------TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLV 232 (408)
Q Consensus 161 ~~~~~~~~~~--------~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~ 232 (408)
+.++++++.. ++++.|||+++... . + .....+.+|+ +||++++++|||||||||+..
T Consensus 220 ~~~~~~~~~~~~~~~~~~~~v~~vGPl~~~~~-~--------~-~~~~~~~~~~-----~wLd~~~~~svvyvsfGS~~~ 284 (480)
T PLN00164 220 PGVLAAIADGRCTPGRPAPTVYPIGPVISLAF-T--------P-PAEQPPHECV-----RWLDAQPPASVVFLCFGSMGF 284 (480)
T ss_pred HHHHHHHHhccccccCCCCceEEeCCCccccc-c--------C-CCccchHHHH-----HHHHhCCCCceEEEEeccccc
Confidence 9999999753 36999999975320 0 0 0011233466 999999999999999999999
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCc---------ccccccchhhhhhcCCCeEEE-ecccHHHHhcccCcceEEec
Q 045998 233 LSQNQIDSIAAALINTKRPFLWVIRSQEN---------KEGGVLRAGFLEETKDRGLVV-KWCSQEKVLMHAAVSCFLTH 302 (408)
Q Consensus 233 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~---------~~~~~lp~~~~~~~~~n~~v~-~w~pq~~lL~h~~v~~fitH 302 (408)
++.+++++++.+|+.++++|||+++.... .....+|++|.+++.++++++ +|+||.+||+|+++|+||||
T Consensus 285 ~~~~q~~ela~gL~~s~~~flWv~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~PQ~~iL~h~~vg~fvtH 364 (480)
T PLN00164 285 FDAPQVREIAAGLERSGHRFLWVLRGPPAAGSRHPTDADLDELLPEGFLERTKGRGLVWPTWAPQKEILAHAAVGGFVTH 364 (480)
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEEcCCcccccccccccchhhhCChHHHHHhcCCCeEEeecCCHHHHhcCcccCeEEee
Confidence 99999999999999999999999985321 001148899999998888877 99999999999999999999
Q ss_pred cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCC--CCCcCHHHHHHHHHHHhcCC--cHHHHHHHHH
Q 045998 303 CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEE--DGTLSIQQVQRCIDEATQGL--NATQMKKRAV 378 (408)
Q Consensus 303 gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~--~~~~~~~~l~~~i~~vl~~~--~~~~~~~~a~ 378 (408)
|||||++||+++|||||+||+++||+.||+++++.+|+|+.+..+. ++.+++++|.++|+++|.++ +++.+|++|+
T Consensus 365 ~GwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~~~~~~gvG~~~~~~~~~~~~~~~e~l~~av~~vm~~~~~~~~~~r~~a~ 444 (480)
T PLN00164 365 CGWNSVLESLWHGVPMAPWPLYAEQHLNAFELVADMGVAVAMKVDRKRDNFVEAAELERAVRSLMGGGEEEGRKAREKAA 444 (480)
T ss_pred cccchHHHHHHcCCCEEeCCccccchhHHHHHHHHhCeEEEeccccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHH
Confidence 9999999999999999999999999999998865599999996421 13579999999999999764 4889999999
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHHhC
Q 045998 379 AWKEAAKKALEDGGSSDANINRFINEITRK 408 (408)
Q Consensus 379 ~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 408 (408)
++++.+++|+.+||||.+++++||++++++
T Consensus 445 ~~~~~~~~a~~~gGSS~~~l~~~v~~~~~~ 474 (480)
T PLN00164 445 EMKAACRKAVEEGGSSYAALQRLAREIRHG 474 (480)
T ss_pred HHHHHHHHHhcCCCcHHHHHHHHHHHHHhc
Confidence 999999999999999999999999999864
No 10
>PLN03004 UDP-glycosyltransferase
Probab=100.00 E-value=8.6e-63 Score=489.00 Aligned_cols=367 Identities=28% Similarity=0.503 Sum_probs=290.0
Q ss_pred CCeEEEEcCCCCCCCc--ccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEe
Q 045998 12 STVQFVFFPDGLSDDF--DRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLW 89 (408)
Q Consensus 12 ~gi~f~~i~~glp~~~--~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~ 89 (408)
++|+|+.+|++++.+. +...+...++..+...+.+.++++++++.. +.+++|||+|.+++|+.++|+++|||++.||
T Consensus 62 ~~i~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~-~~pv~cII~D~~~~Wa~~vA~~lgIP~v~F~ 140 (451)
T PLN03004 62 PSITFHHLPAVTPYSSSSTSRHHHESLLLEILCFSNPSVHRTLFSLSR-NFNVRAMIIDFFCTAVLDITADFTFPVYFFY 140 (451)
T ss_pred CCeEEEEcCCCCCCCCccccccCHHHHHHHHHHhhhHHHHHHHHhcCC-CCCceEEEECCcchhHHHHHHHhCCCEEEEe
Confidence 4799999998875322 222244445555556778888999988732 2356999999999999999999999999999
Q ss_pred cchhHHHHHHHHhhcCCCCCCCCCCCC-ccccCCCCCCcccCCCCCCCCCh---------hHHhhhcccceEEccchhhc
Q 045998 90 IQACAAYYIYYHYFKHPQLFPSLENPN-EAVHLPAMPSLLVNELPSSLLPS---------DFVQKLDKVKWILGSSFYEL 159 (408)
Q Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~lvnt~~~l 159 (408)
+++++.+++++++.......+.....+ ..+.+||+|.++..++++++... .....+.+++.+++|||++|
T Consensus 141 t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPg~p~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vl~NTf~eL 220 (451)
T PLN03004 141 TSGAACLAFSFYLPTIDETTPGKNLKDIPTVHIPGVPPMKGSDMPKAVLERDDEVYDVFIMFGKQLSKSSGIIINTFDAL 220 (451)
T ss_pred CHhHHHHHHHHHHHhccccccccccccCCeecCCCCCCCChHHCchhhcCCchHHHHHHHHHHHhhcccCeeeeeeHHHh
Confidence 999999998887643211111110111 23468999888888888766321 33344567889999999999
Q ss_pred cHHHHHHhhcc---CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcccCCHH
Q 045998 160 EENVVASMATF---TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLSQN 236 (408)
Q Consensus 160 e~~~~~~~~~~---~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~ 236 (408)
|+.++++++.. +|++.|||+++... ... + .. ..+.+|+ +|||+++++|||||||||+..++.+
T Consensus 221 E~~~l~~l~~~~~~~~v~~vGPl~~~~~------~~~-~-~~-~~~~~c~-----~wLd~~~~~sVvyvsfGS~~~~~~~ 286 (451)
T PLN03004 221 ENRAIKAITEELCFRNIYPIGPLIVNGR------IED-R-ND-NKAVSCL-----NWLDSQPEKSVVFLCFGSLGLFSKE 286 (451)
T ss_pred HHHHHHHHHhcCCCCCEEEEeeeccCcc------ccc-c-cc-chhhHHH-----HHHHhCCCCceEEEEecccccCCHH
Confidence 99999999753 36999999975310 000 0 01 1234577 9999999999999999999999999
Q ss_pred HHHHHHHHHHhCCCCEEEEEecCCc-c----ccc-ccchhhhhhcCCCeE-EEecccHHHHhcccCcceEEeccCcchHH
Q 045998 237 QIDSIAAALINTKRPFLWVIRSQEN-K----EGG-VLRAGFLEETKDRGL-VVKWCSQEKVLMHAAVSCFLTHCGWNSTL 309 (408)
Q Consensus 237 ~~~~~~~al~~~~~~~iw~~~~~~~-~----~~~-~lp~~~~~~~~~n~~-v~~w~pq~~lL~h~~v~~fitHgG~~s~~ 309 (408)
++++++.+|+.++++|||+++.... . ... .+|++|.+++.+++. +.+|+||.+||+|+++|+|||||||||++
T Consensus 287 q~~ela~gL~~s~~~FlW~~r~~~~~~~~~~~~~~~lp~gf~er~~~~g~~v~~W~PQ~~iL~H~~v~~FvTH~G~nS~l 366 (451)
T PLN03004 287 QVIEIAVGLEKSGQRFLWVVRNPPELEKTELDLKSLLPEGFLSRTEDKGMVVKSWAPQVPVLNHKAVGGFVTHCGWNSIL 366 (451)
T ss_pred HHHHHHHHHHHCCCCEEEEEcCCccccccccchhhhCChHHHHhccCCcEEEEeeCCHHHHhCCCccceEeccCcchHHH
Confidence 9999999999999999999995311 0 011 389999999877655 45999999999999999999999999999
Q ss_pred HHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHh
Q 045998 310 ETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALE 389 (408)
Q Consensus 310 eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~ 389 (408)
||+++|||||+||+++||+.||+++++++|+|++++....+.+++++|+++|+++|++ ++||+||+++++.+++|+.
T Consensus 367 Eal~~GVP~v~~P~~~DQ~~na~~~~~~~g~g~~l~~~~~~~~~~e~l~~av~~vm~~---~~~r~~a~~~~~~a~~Av~ 443 (451)
T PLN03004 367 EAVCAGVPMVAWPLYAEQRFNRVMIVDEIKIAISMNESETGFVSSTEVEKRVQEIIGE---CPVRERTMAMKNAAELALT 443 (451)
T ss_pred HHHHcCCCEEeccccccchhhHHHHHHHhCceEEecCCcCCccCHHHHHHHHHHHhcC---HHHHHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999855899999975212368999999999999987 7999999999999999999
Q ss_pred cCCChHH
Q 045998 390 DGGSSDA 396 (408)
Q Consensus 390 ~gg~s~~ 396 (408)
+||||.+
T Consensus 444 ~GGSS~~ 450 (451)
T PLN03004 444 ETGSSHT 450 (451)
T ss_pred CCCCCCC
Confidence 9999874
No 11
>PLN02534 UDP-glycosyltransferase
Probab=100.00 E-value=3.1e-62 Score=489.24 Aligned_cols=383 Identities=27% Similarity=0.491 Sum_probs=292.6
Q ss_pred CeEEEEcC-----CCCCCCcccccCH--HHHHHHH---HHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcC
Q 045998 13 TVQFVFFP-----DGLSDDFDRIKYV--GAFIESL---QKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHK 82 (408)
Q Consensus 13 gi~f~~i~-----~glp~~~~~~~~~--~~~~~~~---~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lg 82 (408)
.|+|+++| ||+|++.+.+.+. ..++..+ ...+.+.++++|++. +.+++|||+|.++.|+.++|+++|
T Consensus 64 ~i~~~~lp~p~~~dglp~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~lL~~~---~~pp~cIV~D~f~~Wa~dVA~~lg 140 (491)
T PLN02534 64 PIRLVQIPFPCKEVGLPIGCENLDTLPSRDLLRKFYDAVDKLQQPLERFLEQA---KPPPSCIISDKCLSWTSKTAQRFN 140 (491)
T ss_pred CeEEEEcCCCCccCCCCCCccccccCCcHHHHHHHHHHHHHhHHHHHHHHHhc---CCCCcEEEECCccHHHHHHHHHhC
Confidence 49999997 7999886654331 1333333 234566777777653 246899999999999999999999
Q ss_pred CCeEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCC---cccCCCCCCCCCh-------hHHhhh-cccceE
Q 045998 83 IPCAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPS---LLVNELPSSLLPS-------DFVQKL-DKVKWI 151 (408)
Q Consensus 83 IP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~-------~~~~~~-~~~~~~ 151 (408)
||++.||+++++.++.+++++......+.. ..+..+.+|++|. +...++++++.+. ..+... .+++.+
T Consensus 141 IP~v~F~t~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~iPg~p~~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~a~~v 219 (491)
T PLN02534 141 IPRIVFHGMCCFSLLSSHNIRLHNAHLSVS-SDSEPFVVPGMPQSIEITRAQLPGAFVSLPDLDDVRNKMREAESTAFGV 219 (491)
T ss_pred CCeEEEecchHHHHHHHHHHHHhcccccCC-CCCceeecCCCCccccccHHHCChhhcCcccHHHHHHHHHhhcccCCEE
Confidence 999999999998887765443222111111 1123355888864 6677777654321 122222 346799
Q ss_pred EccchhhccHHHHHHhhcc--CCceeeCCCCCccccCCCCCCCCCCCCCcc-cccccchhhhhhhhccCCCCceEEEecC
Q 045998 152 LGSSFYELEENVVASMATF--TPIIPVGPLVSPFMLGKQENATAPSLDMWS-TAEECSCIEIHQWLNKKPPSSVIYISFG 228 (408)
Q Consensus 152 lvnt~~~le~~~~~~~~~~--~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~l~~~l~~~~~~~vvyvs~G 228 (408)
++|||++||+.++++++.. +|++.|||+++..... .+......... .+++|+ +||++++++||||||||
T Consensus 220 lvNTf~eLE~~~l~~l~~~~~~~v~~VGPL~~~~~~~---~~~~~~~~~~~~~~~~cl-----~wLd~~~~~sVvyvsfG 291 (491)
T PLN02534 220 VVNSFNELEHGCAEAYEKAIKKKVWCVGPVSLCNKRN---LDKFERGNKASIDETQCL-----EWLDSMKPRSVIYACLG 291 (491)
T ss_pred EEecHHHhhHHHHHHHHhhcCCcEEEECccccccccc---ccccccCCccccchHHHH-----HHHhcCCCCceEEEEec
Confidence 9999999999999998764 4699999997532100 00000001111 124588 99999999999999999
Q ss_pred CcccCCHHHHHHHHHHHHhCCCCEEEEEecCCc-cc-cc-ccchhhhhhcCCC-eEEEecccHHHHhcccCcceEEeccC
Q 045998 229 SLLVLSQNQIDSIAAALINTKRPFLWVIRSQEN-KE-GG-VLRAGFLEETKDR-GLVVKWCSQEKVLMHAAVSCFLTHCG 304 (408)
Q Consensus 229 S~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~-~~-~~-~lp~~~~~~~~~n-~~v~~w~pq~~lL~h~~v~~fitHgG 304 (408)
|...+..+++.+++.+|+.++++|||+++.... .. .. .+|++|.+++.++ +++.+|+||.+||+|+++++||||||
T Consensus 292 S~~~~~~~q~~e~a~gl~~~~~~flW~~r~~~~~~~~~~~~~p~gf~~~~~~~g~~v~~w~pq~~iL~h~~v~~fvtH~G 371 (491)
T PLN02534 292 SLCRLVPSQLIELGLGLEASKKPFIWVIKTGEKHSELEEWLVKENFEERIKGRGLLIKGWAPQVLILSHPAIGGFLTHCG 371 (491)
T ss_pred ccccCCHHHHHHHHHHHHhCCCCEEEEEecCccccchhhhcCchhhHHhhccCCeeccCCCCHHHHhcCCccceEEecCc
Confidence 999999999999999999999999999985311 10 01 3688998886544 45559999999999999999999999
Q ss_pred cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecC-------CC--C-CcCHHHHHHHHHHHhc--CCcHHH
Q 045998 305 WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNE-------ED--G-TLSIQQVQRCIDEATQ--GLNATQ 372 (408)
Q Consensus 305 ~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~-------~~--~-~~~~~~l~~~i~~vl~--~~~~~~ 372 (408)
|||++||+++|||||++|+++||+.||++++++||+|+++... .+ + .+++++|.++|+++|. +++|++
T Consensus 372 ~ns~~ea~~~GvP~v~~P~~~dq~~na~~~~e~~~vGv~~~~~~~~~~~~~~~~~~~v~~eev~~~v~~~m~~~~eeg~~ 451 (491)
T PLN02534 372 WNSTIEGICSGVPMITWPLFAEQFLNEKLIVEVLRIGVRVGVEVPVRWGDEERVGVLVKKDEVEKAVKTLMDDGGEEGER 451 (491)
T ss_pred cHHHHHHHHcCCCEEeccccccHHHHHHHHHHhhcceEEecccccccccccccccCccCHHHHHHHHHHHhccccccHHH
Confidence 9999999999999999999999999999999889999998521 01 1 4899999999999997 567899
Q ss_pred HHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 373 MKKRAVAWKEAAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 373 ~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
+|+||++|++.+++|+.+||||.+++++||++|++
T Consensus 452 ~R~rA~elk~~a~~Av~~GGSS~~nl~~fv~~i~~ 486 (491)
T PLN02534 452 RRRRAQELGVMARKAMELGGSSHINLSILIQDVLK 486 (491)
T ss_pred HHHHHHHHHHHHHHHhcCCCcHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999975
No 12
>PLN02562 UDP-glycosyltransferase
Probab=100.00 E-value=8.8e-62 Score=484.49 Aligned_cols=368 Identities=29% Similarity=0.524 Sum_probs=293.1
Q ss_pred CeEEEEcCCCCCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEecch
Q 045998 13 TVQFVFFPDGLSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWIQA 92 (408)
Q Consensus 13 gi~f~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~ 92 (408)
+|+|+.+|+|++++. ..+...++..+...+.+.++++++++... .+++|||+|.++.|+.++|+++|||++.||+++
T Consensus 58 ~i~~v~lp~g~~~~~--~~~~~~l~~a~~~~~~~~l~~ll~~l~~~-~pv~cvI~D~~~~w~~~vA~~~giP~~~f~~~~ 134 (448)
T PLN02562 58 GITFMSISDGQDDDP--PRDFFSIENSMENTMPPQLERLLHKLDED-GEVACMVVDLLASWAIGVADRCGVPVAGFWPVM 134 (448)
T ss_pred CEEEEECCCCCCCCc--cccHHHHHHHHHHhchHHHHHHHHHhcCC-CCcEEEEECCccHhHHHHHHHhCCCEEEEechh
Confidence 799999999887543 12344555666667888999999987532 256899999999999999999999999999999
Q ss_pred hHHHHHHHHhhcCC-C-CCCCCCCC---CccccCCCCCCcccCCCCCCCCCh-----------hHHhhhcccceEEccch
Q 045998 93 CAAYYIYYHYFKHP-Q-LFPSLENP---NEAVHLPAMPSLLVNELPSSLLPS-----------DFVQKLDKVKWILGSSF 156 (408)
Q Consensus 93 ~~~~~~~~~~~~~~-~-~~~~~~~~---~~~~~~p~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~lvnt~ 156 (408)
+..+.++++..... . ..+....+ .....+|++|.++..+++.++... +.+....+++++++|||
T Consensus 135 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Pg~~~l~~~dl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf 214 (448)
T PLN02562 135 LAAYRLIQAIPELVRTGLISETGCPRQLEKICVLPEQPLLSTEDLPWLIGTPKARKARFKFWTRTLERTKSLRWILMNSF 214 (448)
T ss_pred HHHHHHHHHHHHHhhccccccccccccccccccCCCCCCCChhhCcchhcCCCcchHHHHHHHHHHhccccCCEEEEcCh
Confidence 98888776553110 0 01110011 111247888878888888765311 33344566889999999
Q ss_pred hhccHHHHHHhhc-----c-CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCc
Q 045998 157 YELEENVVASMAT-----F-TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSL 230 (408)
Q Consensus 157 ~~le~~~~~~~~~-----~-~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~ 230 (408)
++||+..++.++. . ++++.|||+++... ....+..++..+.+|+ +||++++++|||||||||+
T Consensus 215 ~eLE~~~~~~~~~~~~~~~~~~v~~iGpl~~~~~------~~~~~~~~~~~~~~c~-----~wLd~~~~~svvyvsfGS~ 283 (448)
T PLN02562 215 KDEEYDDVKNHQASYNNGQNPQILQIGPLHNQEA------TTITKPSFWEEDMSCL-----GWLQEQKPNSVIYISFGSW 283 (448)
T ss_pred hhhCHHHHHHHHhhhccccCCCEEEecCcccccc------cccCCCccccchHHHH-----HHHhcCCCCceEEEEeccc
Confidence 9999988876642 2 45999999976421 0000111122334567 9999998899999999998
Q ss_pred c-cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHH
Q 045998 231 L-VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTL 309 (408)
Q Consensus 231 ~-~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~ 309 (408)
. .++.+++++++.+|++++++|||+++..... .+|++|.+++++|+++++|+||.+||+|+++++|||||||||++
T Consensus 284 ~~~~~~~~~~~l~~~l~~~g~~fiW~~~~~~~~---~l~~~~~~~~~~~~~v~~w~PQ~~iL~h~~v~~fvtH~G~nS~~ 360 (448)
T PLN02562 284 VSPIGESNVRTLALALEASGRPFIWVLNPVWRE---GLPPGYVERVSKQGKVVSWAPQLEVLKHQAVGCYLTHCGWNSTM 360 (448)
T ss_pred ccCCCHHHHHHHHHHHHHCCCCEEEEEcCCchh---hCCHHHHHHhccCEEEEecCCHHHHhCCCccceEEecCcchhHH
Confidence 6 6799999999999999999999999764333 58889999999999999999999999999999999999999999
Q ss_pred HHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHh
Q 045998 310 ETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALE 389 (408)
Q Consensus 310 eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~ 389 (408)
||+++|||||+||+++||+.||+++++.+|+|+.+. .+++++|.++|+++|.+ ++||+||+++++.++++ +
T Consensus 361 Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~-----~~~~~~l~~~v~~~l~~---~~~r~~a~~l~~~~~~~-~ 431 (448)
T PLN02562 361 EAIQCQKRLLCYPVAGDQFVNCAYIVDVWKIGVRIS-----GFGQKEVEEGLRKVMED---SGMGERLMKLRERAMGE-E 431 (448)
T ss_pred HHHHcCCCEEeCCcccchHHHHHHHHHHhCceeEeC-----CCCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHhc-C
Confidence 999999999999999999999999986579998883 47999999999999987 79999999999999887 6
Q ss_pred cCCChHHHHHHHHHHHH
Q 045998 390 DGGSSDANINRFINEIT 406 (408)
Q Consensus 390 ~gg~s~~~~~~~v~~l~ 406 (408)
.||||.+++++||++++
T Consensus 432 ~gGSS~~nl~~~v~~~~ 448 (448)
T PLN02562 432 ARLRSMMNFTTLKDELK 448 (448)
T ss_pred CCCCHHHHHHHHHHHhC
Confidence 78999999999999874
No 13
>PLN02167 UDP-glycosyltransferase family protein
Probab=100.00 E-value=9.1e-62 Score=488.63 Aligned_cols=380 Identities=27% Similarity=0.463 Sum_probs=295.5
Q ss_pred CCeEEEEcCCCC-CCCccc-ccCHHHHHHHHHHHhhHHHHHHHHHhhcC----CC-CccEEEECCCCCcHHHHHHHcCCC
Q 045998 12 STVQFVFFPDGL-SDDFDR-IKYVGAFIESLQKVGSKNLSSIINNLSNN----DK-KKSCIITNPFMPWVPDVAAEHKIP 84 (408)
Q Consensus 12 ~gi~f~~i~~gl-p~~~~~-~~~~~~~~~~~~~~~~~~l~~ll~~l~~~----~~-~~D~vI~D~~~~~~~~vA~~lgIP 84 (408)
++|+|++||++. |++.+. ..+....+..+.+.+.+.+++.++++..+ +. +++|||+|.|++|+.++|+++|||
T Consensus 62 ~~i~~~~lp~~~~p~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~~~~pv~cvV~D~f~~Wa~dVA~elgIP 141 (475)
T PLN02167 62 PRIRLVTLPEVQDPPPMELFVKASEAYILEFVKKMVPLVRDALSTLVSSRDESDSVRVAGLVLDFFCVPLIDVGNEFNLP 141 (475)
T ss_pred CCeEEEECCCCCCCccccccccchHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCeEEEEECCccHHHHHHHHHhCCC
Confidence 369999999765 322221 12233344555566777888888776421 12 469999999999999999999999
Q ss_pred eEEEecchhHHHHHHHHhhcCCCCCC----CCCCCCccccCCCCC-CcccCCCCCCCCCh-------hHHhhhcccceEE
Q 045998 85 CAVLWIQACAAYYIYYHYFKHPQLFP----SLENPNEAVHLPAMP-SLLVNELPSSLLPS-------DFVQKLDKVKWIL 152 (408)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~p~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~l 152 (408)
++.||+++++.++++++........+ .. ..+..+.+||++ +++..+++.++... ..+....+++.++
T Consensus 142 ~v~F~t~~A~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~iPgl~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~a~~vl 220 (475)
T PLN02167 142 SYIFLTCNAGFLGMMKYLPERHRKTASEFDLS-SGEEELPIPGFVNSVPTKVLPPGLFMKESYEAWVEIAERFPEAKGIL 220 (475)
T ss_pred EEEEECccHHHHHHHHHHHHhccccccccccC-CCCCeeECCCCCCCCChhhCchhhhCcchHHHHHHHHHhhcccCEee
Confidence 99999999999888776532111111 10 111235589984 57778887644221 3344566789999
Q ss_pred ccchhhccHHHHHHhhcc----CCceeeCCCCCccccCCCCCCCCCCCCCcc-cccccchhhhhhhhccCCCCceEEEec
Q 045998 153 GSSFYELEENVVASMATF----TPIIPVGPLVSPFMLGKQENATAPSLDMWS-TAEECSCIEIHQWLNKKPPSSVIYISF 227 (408)
Q Consensus 153 vnt~~~le~~~~~~~~~~----~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~-~~~~~l~~~l~~~l~~~~~~~vvyvs~ 227 (408)
+|||++||+.++++++.. ++++.|||+++... . ... .+.. .+.+|+ +||++++++|||||||
T Consensus 221 vNTf~eLE~~~~~~l~~~~~~~p~v~~vGpl~~~~~-~-----~~~--~~~~~~~~~~~-----~wld~~~~~svvyvsf 287 (475)
T PLN02167 221 VNSFTELEPNAFDYFSRLPENYPPVYPVGPILSLKD-R-----TSP--NLDSSDRDRIM-----RWLDDQPESSVVFLCF 287 (475)
T ss_pred eccHHHHHHHHHHHHHhhcccCCeeEEecccccccc-c-----cCC--CCCcchhHHHH-----HHHhcCCCCceEEEee
Confidence 999999999999998643 46999999976421 0 000 0111 112355 9999998899999999
Q ss_pred CCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCc---ccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccC
Q 045998 228 GSLLVLSQNQIDSIAAALINTKRPFLWVIRSQEN---KEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCG 304 (408)
Q Consensus 228 GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~---~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG 304 (408)
||+..++.+++.+++.+|+.++++|||+++.... .....+|++|.+++.+++++++|+||.+||+|+++|+||||||
T Consensus 288 GS~~~~~~~~~~ela~~l~~~~~~flw~~~~~~~~~~~~~~~lp~~~~er~~~rg~v~~w~PQ~~iL~h~~vg~fvtH~G 367 (475)
T PLN02167 288 GSLGSLPAPQIKEIAQALELVGCRFLWSIRTNPAEYASPYEPLPEGFMDRVMGRGLVCGWAPQVEILAHKAIGGFVSHCG 367 (475)
T ss_pred cccccCCHHHHHHHHHHHHhCCCcEEEEEecCcccccchhhhCChHHHHHhccCeeeeccCCHHHHhcCcccCeEEeeCC
Confidence 9999899999999999999999999999985311 1112589999999999999999999999999999999999999
Q ss_pred cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecC---C-CCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 045998 305 WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNE---E-DGTLSIQQVQRCIDEATQGLNATQMKKRAVAW 380 (408)
Q Consensus 305 ~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~---~-~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 380 (408)
|||++||+++|||||+||+++||+.||+++.+.+|+|+.+... + +..+++++|.++|+++|.++ +.||+||+++
T Consensus 368 ~nS~~Eal~~GvP~l~~P~~~DQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~--~~~r~~a~~~ 445 (475)
T PLN02167 368 WNSVLESLWFGVPIATWPMYAEQQLNAFTMVKELGLAVELRLDYVSAYGEIVKADEIAGAVRSLMDGE--DVPRKKVKEI 445 (475)
T ss_pred cccHHHHHHcCCCEEeccccccchhhHHHHHHHhCeeEEeecccccccCCcccHHHHHHHHHHHhcCC--HHHHHHHHHH
Confidence 9999999999999999999999999998744349999999641 0 13579999999999999763 5899999999
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 381 KEAAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 381 ~~~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
++.+++++.+||||.+++++||++|++
T Consensus 446 ~~~~~~av~~gGsS~~~l~~~v~~i~~ 472 (475)
T PLN02167 446 AEAARKAVMDGGSSFVAVKRFIDDLLG 472 (475)
T ss_pred HHHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 999999999999999999999999975
No 14
>PLN02554 UDP-glycosyltransferase family protein
Probab=100.00 E-value=1.2e-61 Score=488.44 Aligned_cols=375 Identities=27% Similarity=0.464 Sum_probs=289.8
Q ss_pred CCeEEEEcCCCCCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhc-----CCCCccEEEECCCCCcHHHHHHHcCCCeE
Q 045998 12 STVQFVFFPDGLSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSN-----NDKKKSCIITNPFMPWVPDVAAEHKIPCA 86 (408)
Q Consensus 12 ~gi~f~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~-----~~~~~D~vI~D~~~~~~~~vA~~lgIP~v 86 (408)
.+|+|+.||++.++... ..+...++. .+.+.+++.++++.. ++.+++|||+|.++.|+.++|+++|||++
T Consensus 63 ~~i~~~~lp~~~~~~~~-~~~~~~~~~----~~~~~~~~~l~~l~~~~~~~~~~pv~cvV~D~f~~wa~dvA~~lgIP~~ 137 (481)
T PLN02554 63 DRLRYEVISAGDQPTTE-DPTFQSYID----NQKPKVRDAVAKLVDDSSTPSSPRLAGFVVDMFCTSMIDVANEFGVPSY 137 (481)
T ss_pred CCeEEEEcCCCCCCccc-chHHHHHHH----HHHHHHHHHHHHHHhhhccCCCCCeEEEEECCcchhHHHHHHHhCCCEE
Confidence 46999999988753211 112222333 344455555555431 11234899999999999999999999999
Q ss_pred EEecchhHHHHHHHHhhcCCCC--CCCCC--CCCccccCCCCC-CcccCCCCCCCCCh-------hHHhhhcccceEEcc
Q 045998 87 VLWIQACAAYYIYYHYFKHPQL--FPSLE--NPNEAVHLPAMP-SLLVNELPSSLLPS-------DFVQKLDKVKWILGS 154 (408)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~--~~~~~--~~~~~~~~p~~~-~~~~~~~~~~~~~~-------~~~~~~~~~~~~lvn 154 (408)
.||+++++.+++++++...... .+..+ +....+.+|+++ +++..++++++... +....+.+++++++|
T Consensus 138 ~F~t~sa~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~iPgl~~pl~~~dlp~~~~~~~~~~~~~~~~~~~~~~~gvlvN 217 (481)
T PLN02554 138 MFYTSNATFLGLQLHVQMLYDEKKYDVSELEDSEVELDVPSLTRPYPVKCLPSVLLSKEWLPLFLAQARRFREMKGILVN 217 (481)
T ss_pred EEeCCcHHHHHHHHhhhhhccccccCccccCCCCceeECCCCCCCCCHHHCCCcccCHHHHHHHHHHHHhcccCCEEEEe
Confidence 9999999999998876432211 11110 111234589984 67778888755432 333445678999999
Q ss_pred chhhccHHHHHHhhc---c-CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCc
Q 045998 155 SFYELEENVVASMAT---F-TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSL 230 (408)
Q Consensus 155 t~~~le~~~~~~~~~---~-~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~ 230 (408)
|+.+||..+..++.+ . ++++.|||++.... +.+ + . ....+.++.+||++++++|||||||||+
T Consensus 218 t~~eLe~~~~~~l~~~~~~~~~v~~vGpl~~~~~----~~~---~-~-----~~~~~~~~~~wLd~~~~~svvyvsfGS~ 284 (481)
T PLN02554 218 TVAELEPQALKFFSGSSGDLPPVYPVGPVLHLEN----SGD---D-S-----KDEKQSEILRWLDEQPPKSVVFLCFGSM 284 (481)
T ss_pred chHHHhHHHHHHHHhcccCCCCEEEeCCCccccc----ccc---c-c-----ccccchHHHHHHhcCCCCcEEEEecccc
Confidence 999999999988874 2 46999999953210 000 0 0 0112344559999998899999999999
Q ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEecCCc-----------ccccccchhhhhhcCCCeEEEecccHHHHhcccCcceE
Q 045998 231 LVLSQNQIDSIAAALINTKRPFLWVIRSQEN-----------KEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCF 299 (408)
Q Consensus 231 ~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~-----------~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~f 299 (408)
..++.+++++++.+|+.++++|||+++.... .....+|++|.+++++|+++++|+||.+||+|+++++|
T Consensus 285 ~~~~~~~~~~la~~l~~~~~~flW~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~r~~~~g~v~~W~PQ~~iL~H~~v~~F 364 (481)
T PLN02554 285 GGFSEEQAREIAIALERSGHRFLWSLRRASPNIMKEPPGEFTNLEEILPEGFLDRTKDIGKVIGWAPQVAVLAKPAIGGF 364 (481)
T ss_pred ccCCHHHHHHHHHHHHHcCCCeEEEEcCCcccccccccccccchhhhCChHHHHHhccCceEEeeCCHHHHhCCcccCcc
Confidence 9999999999999999999999999985210 00113689999999999999999999999999999999
Q ss_pred EeccCcchHHHHHHcCCceeeccCCCChhhhHHh-hhceeeeEEEeecC--------CCCCcCHHHHHHHHHHHhcCCcH
Q 045998 300 LTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKL-LVDVFKIGVRMRNE--------EDGTLSIQQVQRCIDEATQGLNA 370 (408)
Q Consensus 300 itHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~-v~~~~g~G~~l~~~--------~~~~~~~~~l~~~i~~vl~~~~~ 370 (408)
||||||||++||+++|||||+||+++||+.||++ +++ +|+|+.+.+. ..+.+++++|+++|+++|.++
T Consensus 365 vtH~G~nS~~Ea~~~GVP~l~~P~~~DQ~~Na~~~v~~-~g~Gv~l~~~~~~~~~~~~~~~~~~e~l~~av~~vm~~~-- 441 (481)
T PLN02554 365 VTHCGWNSILESLWFGVPMAAWPLYAEQKFNAFEMVEE-LGLAVEIRKYWRGDLLAGEMETVTAEEIERGIRCLMEQD-- 441 (481)
T ss_pred cccCccchHHHHHHcCCCEEecCccccchhhHHHHHHH-hCceEEeeccccccccccccCeEcHHHHHHHHHHHhcCC--
Confidence 9999999999999999999999999999999955 665 9999999631 124789999999999999732
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 371 TQMKKRAVAWKEAAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 371 ~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
++||+||+++++.+++|+.+||||.+++++||++|++
T Consensus 442 ~~~r~~a~~l~~~~~~av~~gGss~~~l~~lv~~~~~ 478 (481)
T PLN02554 442 SDVRKRVKEMSEKCHVALMDGGSSHTALKKFIQDVTK 478 (481)
T ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHHh
Confidence 7999999999999999999999999999999999986
No 15
>PLN02863 UDP-glucoronosyl/UDP-glucosyl transferase family protein
Probab=100.00 E-value=1.3e-61 Score=485.30 Aligned_cols=384 Identities=24% Similarity=0.398 Sum_probs=291.4
Q ss_pred CCeEEEEcC----CCCCCCcccccCH-HH---HHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCC
Q 045998 12 STVQFVFFP----DGLSDDFDRIKYV-GA---FIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKI 83 (408)
Q Consensus 12 ~gi~f~~i~----~glp~~~~~~~~~-~~---~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgI 83 (408)
.+|+|+.+| +++|+|.+...+. .. .+......+.+.+.++++++ +.+++|||+|.+++|+.++|+++||
T Consensus 60 ~~i~~~~lp~P~~~~lPdG~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~---~~~p~cvI~D~f~~Wa~dVA~e~GI 136 (477)
T PLN02863 60 PSIETLVLPFPSHPSIPSGVENVKDLPPSGFPLMIHALGELYAPLLSWFRSH---PSPPVAIISDMFLGWTQNLACQLGI 136 (477)
T ss_pred CCeeEEeCCCCCcCCCCCCCcChhhcchhhHHHHHHHHHHhHHHHHHHHHhC---CCCCeEEEEcCchHhHHHHHHHcCC
Confidence 468888664 4788887655332 12 22222334556666666653 2467999999999999999999999
Q ss_pred CeEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccc---cCCCCCCcccCCCCCCCCCh-----------hHHhhhcccc
Q 045998 84 PCAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAV---HLPAMPSLLVNELPSSLLPS-----------DFVQKLDKVK 149 (408)
Q Consensus 84 P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~p~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~ 149 (408)
|++.||+++++.++++++++............+..+ .+||++.++..+++.++... +.+.....++
T Consensus 137 P~~~F~t~sA~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~ 216 (477)
T PLN02863 137 RRFVFSPSGAMALSIMYSLWREMPTKINPDDQNEILSFSKIPNCPKYPWWQISSLYRSYVEGDPAWEFIKDSFRANIASW 216 (477)
T ss_pred CEEEEeccCHHHHHHHHHHhhcccccccccccccccccCCCCCCCCcChHhCchhhhccCccchHHHHHHHHHhhhccCC
Confidence 999999999999999888764331110000111112 37888778888888765421 1222234567
Q ss_pred eEEccchhhccHHHHHHhhcc---CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEe
Q 045998 150 WILGSSFYELEENVVASMATF---TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYIS 226 (408)
Q Consensus 150 ~~lvnt~~~le~~~~~~~~~~---~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs 226 (408)
.+++|||++||+.++++++.. +|++.|||+++....+.. ....|......+++|+ +||+++++++|||||
T Consensus 217 ~vlvNTf~eLE~~~~~~~~~~~~~~~v~~IGPL~~~~~~~~~--~~~~~~~~~~~~~~~~-----~WLd~~~~~svVyvs 289 (477)
T PLN02863 217 GLVVNSFTELEGIYLEHLKKELGHDRVWAVGPILPLSGEKSG--LMERGGPSSVSVDDVM-----TWLDTCEDHKVVYVC 289 (477)
T ss_pred EEEEecHHHHHHHHHHHHHhhcCCCCeEEeCCCccccccccc--ccccCCcccccHHHHH-----HHHhcCCCCceEEEE
Confidence 899999999999999999764 469999999764210000 0001111110122344 999999999999999
Q ss_pred cCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcc--cccccchhhhhhcCCCeE-EEecccHHHHhcccCcceEEecc
Q 045998 227 FGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENK--EGGVLRAGFLEETKDRGL-VVKWCSQEKVLMHAAVSCFLTHC 303 (408)
Q Consensus 227 ~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~--~~~~lp~~~~~~~~~n~~-v~~w~pq~~lL~h~~v~~fitHg 303 (408)
|||+..++.+++++++.+|+.++++|||+++..... ....+|++|.+++.+++. +.+|+||.+||+|+++++|||||
T Consensus 290 fGS~~~~~~~~~~ela~gL~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~vL~h~~v~~fvtH~ 369 (477)
T PLN02863 290 FGSQVVLTKEQMEALASGLEKSGVHFIWCVKEPVNEESDYSNIPSGFEDRVAGRGLVIRGWAPQVAILSHRAVGAFLTHC 369 (477)
T ss_pred eeceecCCHHHHHHHHHHHHhCCCcEEEEECCCcccccchhhCCHHHHHHhccCCEEecCCCCHHHHhcCCCcCeEEecC
Confidence 999999999999999999999999999999853211 112588899888765554 45999999999999999999999
Q ss_pred CcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 045998 304 GWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEA 383 (408)
Q Consensus 304 G~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~ 383 (408)
||||++||+++|||||+||+++||+.||+++++++|+|+++.....+.++++++.++|+++|.+ +++||+||+++++.
T Consensus 370 G~nS~~Eal~~GvP~l~~P~~~DQ~~na~~v~~~~gvG~~~~~~~~~~~~~~~v~~~v~~~m~~--~~~~r~~a~~l~e~ 447 (477)
T PLN02863 370 GWNSVLEGLVAGVPMLAWPMAADQFVNASLLVDELKVAVRVCEGADTVPDSDELARVFMESVSE--NQVERERAKELRRA 447 (477)
T ss_pred CchHHHHHHHcCCCEEeCCccccchhhHHHHHHhhceeEEeccCCCCCcCHHHHHHHHHHHhhc--cHHHHHHHHHHHHH
Confidence 9999999999999999999999999999998755899999954222457899999999999942 38999999999999
Q ss_pred HHHHHhcCCChHHHHHHHHHHHHh
Q 045998 384 AKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 384 ~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
+++|+++||||.+++++||+++++
T Consensus 448 a~~Av~~gGSS~~~l~~~v~~i~~ 471 (477)
T PLN02863 448 ALDAIKERGSSVKDLDGFVKHVVE 471 (477)
T ss_pred HHHHhccCCcHHHHHHHHHHHHHH
Confidence 999999999999999999999864
No 16
>PLN02764 glycosyltransferase family protein
Probab=100.00 E-value=1.8e-60 Score=471.00 Aligned_cols=357 Identities=22% Similarity=0.402 Sum_probs=281.3
Q ss_pred CeEEEEcC--CCCCCCcccccCHH-H---HHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeE
Q 045998 13 TVQFVFFP--DGLSDDFDRIKYVG-A---FIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCA 86 (408)
Q Consensus 13 gi~f~~i~--~glp~~~~~~~~~~-~---~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v 86 (408)
.++++++| ||+|++.+++.+.. . .+....+.+.+.++++++.+ ++||||+| ++.|+.++|+++|||++
T Consensus 59 ~v~~~~~p~~~glp~g~e~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~-----~~~~iV~D-~~~w~~~vA~~~gIP~~ 132 (453)
T PLN02764 59 VFRSVTVPHVDGLPVGTETVSEIPVTSADLLMSAMDLTRDQVEVVVRAV-----EPDLIFFD-FAHWIPEVARDFGLKTV 132 (453)
T ss_pred eEEEEECCCcCCCCCcccccccCChhHHHHHHHHHHHhHHHHHHHHHhC-----CCCEEEEC-CchhHHHHHHHhCCCEE
Confidence 38888887 89998866543322 2 22223334567777777663 57999999 58999999999999999
Q ss_pred EEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCC----cccCCCCCCCC--C------h-----hHHhhhcccc
Q 045998 87 VLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPS----LLVNELPSSLL--P------S-----DFVQKLDKVK 149 (408)
Q Consensus 87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~~~~~--~------~-----~~~~~~~~~~ 149 (408)
.||+++++.+++++. ..+. . ..++|++|. ++..+++.+.. . . .+...+.+++
T Consensus 133 ~f~~~~a~~~~~~~~-~~~~--~--------~~~~pglp~~~v~l~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~ 201 (453)
T PLN02764 133 KYVVVSASTIASMLV-PGGE--L--------GVPPPGYPSSKVLLRKQDAYTMKNLEPTNTIDVGPNLLERVTTSLMNSD 201 (453)
T ss_pred EEEcHHHHHHHHHhc-cccc--C--------CCCCCCCCCCcccCcHhhCcchhhcCCCccchhHHHHHHHHHHhhccCC
Confidence 999999988887653 1111 0 012466652 44455544311 1 0 2224456788
Q ss_pred eEEccchhhccHHHHHHhhcc--CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEec
Q 045998 150 WILGSSFYELEENVVASMATF--TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISF 227 (408)
Q Consensus 150 ~~lvnt~~~le~~~~~~~~~~--~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~ 227 (408)
.+++|||++||+.++++++.. +|++.|||+++... + . ...+.+|+ +|||+++++|||||||
T Consensus 202 ~vlvNTf~eLE~~~~~~~~~~~~~~v~~VGPL~~~~~-~----------~-~~~~~~cl-----~WLD~q~~~sVvyvsf 264 (453)
T PLN02764 202 VIAIRTAREIEGNFCDYIEKHCRKKVLLTGPVFPEPD-K----------T-RELEERWV-----KWLSGYEPDSVVFCAL 264 (453)
T ss_pred EEEEeccHHhhHHHHHHHHhhcCCcEEEeccCccCcc-c----------c-ccchhHHH-----HHHhCCCCCceEEEee
Confidence 999999999999999999764 46999999975420 0 0 01124588 9999999999999999
Q ss_pred CCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCc--ccccccchhhhhhcCCCeEEE-ecccHHHHhcccCcceEEeccC
Q 045998 228 GSLLVLSQNQIDSIAAALINTKRPFLWVIRSQEN--KEGGVLRAGFLEETKDRGLVV-KWCSQEKVLMHAAVSCFLTHCG 304 (408)
Q Consensus 228 GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~--~~~~~lp~~~~~~~~~n~~v~-~w~pq~~lL~h~~v~~fitHgG 304 (408)
||+..++.+++.+++.+|+..+++|+|+++.... .....+|++|.++++++++++ +|+||.+||+|+++++||||||
T Consensus 265 GS~~~~~~~q~~ela~gL~~s~~pflwv~r~~~~~~~~~~~lp~~f~~r~~grG~v~~~W~PQ~~vL~h~~v~~FvtH~G 344 (453)
T PLN02764 265 GSQVILEKDQFQELCLGMELTGSPFLVAVKPPRGSSTIQEALPEGFEERVKGRGVVWGGWVQQPLILSHPSVGCFVSHCG 344 (453)
T ss_pred cccccCCHHHHHHHHHHHHhCCCCeEEEEeCCCCCcchhhhCCcchHhhhccCCcEEeCCCCHHHHhcCcccCeEEecCC
Confidence 9999999999999999999999999999995311 112369999999998888877 9999999999999999999999
Q ss_pred cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC--CcHHHHHHHHHHHHH
Q 045998 305 WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG--LNATQMKKRAVAWKE 382 (408)
Q Consensus 305 ~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~--~~~~~~~~~a~~l~~ 382 (408)
|||++||+++|||||+||+++||+.||+++++.+|+|+.+.....+.+++++|+++|+++|++ ++++.+|++|+++++
T Consensus 345 ~nS~~Eal~~GVP~l~~P~~~DQ~~na~~l~~~~g~gv~~~~~~~~~~~~e~i~~av~~vm~~~~~~g~~~r~~a~~~~~ 424 (453)
T PLN02764 345 FGSMWESLLSDCQIVLVPQLGDQVLNTRLLSDELKVSVEVAREETGWFSKESLRDAINSVMKRDSEIGNLVKKNHTKWRE 424 (453)
T ss_pred chHHHHHHHcCCCEEeCCcccchHHHHHHHHHHhceEEEeccccCCccCHHHHHHHHHHHhcCCchhHHHHHHHHHHHHH
Confidence 999999999999999999999999999999755999999864211368999999999999976 457889999999999
Q ss_pred HHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 383 AAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 383 ~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
.+ .+||||.+++++||+++.+
T Consensus 425 ~~----~~~GSS~~~l~~lv~~~~~ 445 (453)
T PLN02764 425 TL----ASPGLLTGYVDNFIESLQD 445 (453)
T ss_pred HH----HhcCCHHHHHHHHHHHHHH
Confidence 98 4679999999999999875
No 17
>PLN02448 UDP-glycosyltransferase family protein
Probab=100.00 E-value=6e-60 Score=474.33 Aligned_cols=376 Identities=32% Similarity=0.608 Sum_probs=296.2
Q ss_pred CCeEEEEcCCCCCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEecc
Q 045998 12 STVQFVFFPDGLSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWIQ 91 (408)
Q Consensus 12 ~gi~f~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~ 91 (408)
.||+|+++|+++|++.+...+...++..+.+.+.+.++++++++. .++||||+|.++.|+..+|+++|||++.|+++
T Consensus 62 ~gi~fv~lp~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~---~~~~~VI~D~~~~wa~~vA~~lgIP~v~f~~~ 138 (459)
T PLN02448 62 DNIRFATIPNVIPSELVRAADFPGFLEAVMTKMEAPFEQLLDRLE---PPVTAIVADTYLFWAVGVGNRRNIPVASLWTM 138 (459)
T ss_pred CCEEEEECCCCCCCccccccCHHHHHHHHHHHhHHHHHHHHHhcC---CCcEEEEECCccHHHHHHHHHhCCCeEEEEhH
Confidence 489999999998877544456666667666677888899888874 36899999999999999999999999999999
Q ss_pred hhHHHHHHHHhhcCC--CCCCCCC-C-CCccc-cCCCCCCcccCCCCCCCCCh---------hHHhhhcccceEEccchh
Q 045998 92 ACAAYYIYYHYFKHP--QLFPSLE-N-PNEAV-HLPAMPSLLVNELPSSLLPS---------DFVQKLDKVKWILGSSFY 157 (408)
Q Consensus 92 ~~~~~~~~~~~~~~~--~~~~~~~-~-~~~~~-~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~lvnt~~ 157 (408)
++..++.++++.... ...+... . .+..+ .+|+++.+...+++.++... ..+....+++.+++|||+
T Consensus 139 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iPg~~~l~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~vlvNTf~ 218 (459)
T PLN02448 139 SATFFSVFYHFDLLPQNGHFPVELSESGEERVDYIPGLSSTRLSDLPPIFHGNSRRVLKRILEAFSWVPKAQYLLFTSFY 218 (459)
T ss_pred HHHHHHHHHHhhhhhhccCCCCccccccCCccccCCCCCCCChHHCchhhcCCchHHHHHHHHHHhhcccCCEEEEccHH
Confidence 998887766653211 0111110 0 01112 37888777777777655322 233334567899999999
Q ss_pred hccHHHHHHhhcc--CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcccCCH
Q 045998 158 ELEENVVASMATF--TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLSQ 235 (408)
Q Consensus 158 ~le~~~~~~~~~~--~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~ 235 (408)
+||+.++++++.. ++++.|||+.+..... .. ..+....+. +.++.+||+.+++++||||||||+...+.
T Consensus 219 eLE~~~~~~l~~~~~~~~~~iGP~~~~~~~~---~~-~~~~~~~~~-----~~~~~~wl~~~~~~~vvyvsfGs~~~~~~ 289 (459)
T PLN02448 219 ELEAQAIDALKSKFPFPVYPIGPSIPYMELK---DN-SSSSNNEDN-----EPDYFQWLDSQPEGSVLYVSLGSFLSVSS 289 (459)
T ss_pred HhhHHHHHHHHhhcCCceEEecCcccccccC---CC-ccccccccc-----hhHHHHHHcCCCCCceEEEeecccccCCH
Confidence 9999999998765 3699999997642100 00 000000001 12445999999889999999999998899
Q ss_pred HHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcC
Q 045998 236 NQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAG 315 (408)
Q Consensus 236 ~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~G 315 (408)
+++++++.+|+..+++|||+++... .++.++.++|+++.+|+||.+||+|+++++|||||||||++||+++|
T Consensus 290 ~~~~~~~~~l~~~~~~~lw~~~~~~--------~~~~~~~~~~~~v~~w~pQ~~iL~h~~v~~fvtHgG~nS~~eal~~G 361 (459)
T PLN02448 290 AQMDEIAAGLRDSGVRFLWVARGEA--------SRLKEICGDMGLVVPWCDQLKVLCHSSVGGFWTHCGWNSTLEAVFAG 361 (459)
T ss_pred HHHHHHHHHHHhCCCCEEEEEcCch--------hhHhHhccCCEEEeccCCHHHHhccCccceEEecCchhHHHHHHHcC
Confidence 9999999999999999999876421 23444456799999999999999999999999999999999999999
Q ss_pred CceeeccCCCChhhhHHhhhceeeeEEEeecC--CCCCcCHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHHHHhcC
Q 045998 316 VPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNE--EDGTLSIQQVQRCIDEATQG--LNATQMKKRAVAWKEAAKKALEDG 391 (408)
Q Consensus 316 vP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~--~~~~~~~~~l~~~i~~vl~~--~~~~~~~~~a~~l~~~~~~a~~~g 391 (408)
||||+||+++||+.||+++++.||+|+.+... .++.+++++|+++|+++|.+ +++++||+||+++++++++++.+|
T Consensus 362 vP~l~~P~~~DQ~~na~~v~~~~g~G~~~~~~~~~~~~~~~~~l~~av~~vl~~~~~~~~~~r~~a~~~~~~~~~a~~~g 441 (459)
T PLN02448 362 VPMLTFPLFWDQPLNSKLIVEDWKIGWRVKREVGEETLVGREEIAELVKRFMDLESEEGKEMRRRAKELQEICRGAIAKG 441 (459)
T ss_pred CCEEeccccccchhhHHHHHHHhCceEEEecccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHHHhcCC
Confidence 99999999999999999999767999998632 12468999999999999985 468899999999999999999999
Q ss_pred CChHHHHHHHHHHHHh
Q 045998 392 GSSDANINRFINEITR 407 (408)
Q Consensus 392 g~s~~~~~~~v~~l~~ 407 (408)
|||.+++++||+++++
T Consensus 442 Gss~~~l~~~v~~~~~ 457 (459)
T PLN02448 442 GSSDTNLDAFIRDISQ 457 (459)
T ss_pred CcHHHHHHHHHHHHhc
Confidence 9999999999999976
No 18
>PLN02670 transferase, transferring glycosyl groups
Probab=100.00 E-value=6.3e-60 Score=470.48 Aligned_cols=374 Identities=23% Similarity=0.393 Sum_probs=285.1
Q ss_pred CCeEEEEcC----CCCCCCcccccCHH----HHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCC
Q 045998 12 STVQFVFFP----DGLSDDFDRIKYVG----AFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKI 83 (408)
Q Consensus 12 ~gi~f~~i~----~glp~~~~~~~~~~----~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgI 83 (408)
.+|+|+.|| ||+|++.+.+.+.. .++....+.+.+.++++++++ +++|||+|.|+.|+.++|+++||
T Consensus 58 ~~i~~~~lp~p~~dglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-----~~~cvI~D~f~~wa~~vA~~~gI 132 (472)
T PLN02670 58 SSITLVSFPLPSVPGLPSSAESSTDVPYTKQQLLKKAFDLLEPPLTTFLETS-----KPDWIIYDYASHWLPSIAAELGI 132 (472)
T ss_pred CCeeEEECCCCccCCCCCCcccccccchhhHHHHHHHHHHhHHHHHHHHHhC-----CCcEEEECCcchhHHHHHHHcCC
Confidence 469999997 79998766544332 234444455677777777663 57999999999999999999999
Q ss_pred CeEEEecchhHHHHHHHHhh--cCCCCCCCCCCCCccccCCCC----C--CcccCCCCCCCCCh-----------hHHhh
Q 045998 84 PCAVLWIQACAAYYIYYHYF--KHPQLFPSLENPNEAVHLPAM----P--SLLVNELPSSLLPS-----------DFVQK 144 (408)
Q Consensus 84 P~v~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~p~~----~--~~~~~~~~~~~~~~-----------~~~~~ 144 (408)
|++.|++++++.++++++.. ......+..... ...+|+. + .+...++++++... +....
T Consensus 133 P~~~f~~~~a~~~~~~~~~~~~~~~~~~~~~~~~--~~~~p~~~P~~~~~~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~ 210 (472)
T PLN02670 133 SKAFFSLFTAATLSFIGPPSSLMEGGDLRSTAED--FTVVPPWVPFESNIVFRYHEVTKYVEKTEEDETGPSDSVRFGFA 210 (472)
T ss_pred CEEEEehhhHHHHHHHhhhHhhhhcccCCCcccc--ccCCCCcCCCCccccccHHHhhHHHhccCccchHHHHHHHHHhh
Confidence 99999999999888866442 111111111011 0113332 1 13345666654210 22333
Q ss_pred hcccceEEccchhhccHHHHHHhhcc--CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCce
Q 045998 145 LDKVKWILGSSFYELEENVVASMATF--TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSV 222 (408)
Q Consensus 145 ~~~~~~~lvnt~~~le~~~~~~~~~~--~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~v 222 (408)
+.+++++++|||++||+.++++++.. .|++.|||+.+..... ..+. . .+. ..++++.+|||+++++||
T Consensus 211 ~~~~~gvlvNTf~eLE~~~l~~l~~~~~~~v~~VGPl~~~~~~~--~~~~----~---~~~-~~~~~~~~wLd~~~~~sV 280 (472)
T PLN02670 211 IGGSDVVIIRSSPEFEPEWFDLLSDLYRKPIIPIGFLPPVIEDD--EEDD----T---IDV-KGWVRIKEWLDKQRVNSV 280 (472)
T ss_pred cccCCEEEEeCHHHHhHHHHHHHHHhhCCCeEEEecCCcccccc--cccc----c---ccc-chhHHHHHHHhcCCCCce
Confidence 55688999999999999999999764 4799999997531100 0000 0 000 011334499999988999
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCc---ccccccchhhhhhcCCCeEEE-ecccHHHHhcccCcce
Q 045998 223 IYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQEN---KEGGVLRAGFLEETKDRGLVV-KWCSQEKVLMHAAVSC 298 (408)
Q Consensus 223 vyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~---~~~~~lp~~~~~~~~~n~~v~-~w~pq~~lL~h~~v~~ 298 (408)
|||||||+..++.+++.+++.+|+.++++|||+++.... .....+|++|.+++.++++++ +|+||.+||+|+++|+
T Consensus 281 vyvsfGS~~~l~~~q~~ela~gl~~s~~~FlWv~r~~~~~~~~~~~~lp~~f~~~~~~rG~vv~~W~PQ~~IL~H~~v~~ 360 (472)
T PLN02670 281 VYVALGTEASLRREEVTELALGLEKSETPFFWVLRNEPGTTQNALEMLPDGFEERVKGRGMIHVGWVPQVKILSHESVGG 360 (472)
T ss_pred EEEEecccccCCHHHHHHHHHHHHHCCCCEEEEEcCCcccccchhhcCChHHHHhccCCCeEEeCcCCHHHHhcCcccce
Confidence 999999999999999999999999999999999985311 111258999999998888886 9999999999999999
Q ss_pred EEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCC-CCCcCHHHHHHHHHHHhcCCcHHHHHHHH
Q 045998 299 FLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEE-DGTLSIQQVQRCIDEATQGLNATQMKKRA 377 (408)
Q Consensus 299 fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~-~~~~~~~~l~~~i~~vl~~~~~~~~~~~a 377 (408)
|||||||||++||+++|||||+||+++||+.||+++++ +|+|+++.... ++.+++++|+++|+++|.+++|++||+||
T Consensus 361 FvtHcGwnS~~Eai~~GVP~l~~P~~~DQ~~Na~~v~~-~g~Gv~l~~~~~~~~~~~e~i~~av~~vm~~~~g~~~r~~a 439 (472)
T PLN02670 361 FLTHCGWNSVVEGLGFGRVLILFPVLNEQGLNTRLLHG-KKLGLEVPRDERDGSFTSDSVAESVRLAMVDDAGEEIRDKA 439 (472)
T ss_pred eeecCCcchHHHHHHcCCCEEeCcchhccHHHHHHHHH-cCeeEEeeccccCCcCcHHHHHHHHHHHhcCcchHHHHHHH
Confidence 99999999999999999999999999999999999997 99999997521 24589999999999999887788999999
Q ss_pred HHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 378 VAWKEAAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 378 ~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
+++++.+++ .+.....+++|++.|.+
T Consensus 440 ~~l~~~~~~----~~~~~~~~~~~~~~l~~ 465 (472)
T PLN02670 440 KEMRNLFGD----MDRNNRYVDELVHYLRE 465 (472)
T ss_pred HHHHHHHhC----cchhHHHHHHHHHHHHH
Confidence 999999865 36667888999988864
No 19
>PLN02208 glycosyltransferase family protein
Probab=100.00 E-value=3.6e-59 Score=463.56 Aligned_cols=357 Identities=21% Similarity=0.354 Sum_probs=273.2
Q ss_pred CeEEEEc--C--CCCCCCcccccCHHHHHHHH----HHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCC
Q 045998 13 TVQFVFF--P--DGLSDDFDRIKYVGAFIESL----QKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIP 84 (408)
Q Consensus 13 gi~f~~i--~--~glp~~~~~~~~~~~~~~~~----~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP 84 (408)
+++|.++ | +|+|++.+.+.+....+..+ .+.+.+.++++++++ ++||||+| ++.|+.++|+++|||
T Consensus 56 ~i~~~~l~~p~~dgLp~g~~~~~~l~~~l~~~~~~~~~~~~~~l~~~L~~~-----~~~cVV~D-~~~wa~~vA~e~giP 129 (442)
T PLN02208 56 SIVFHPLTIPPVNGLPAGAETTSDIPISMDNLLSEALDLTRDQVEAAVRAL-----RPDLIFFD-FAQWIPEMAKEHMIK 129 (442)
T ss_pred ceEEEEeCCCCccCCCCCcccccchhHHHHHHHHHHHHHHHHHHHHHHhhC-----CCeEEEEC-CcHhHHHHHHHhCCC
Confidence 5667654 4 78998866444433222222 233445555555443 67999999 689999999999999
Q ss_pred eEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCC----cccCCCCCCCCC-h-------hHHhhhcccceEE
Q 045998 85 CAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPS----LLVNELPSSLLP-S-------DFVQKLDKVKWIL 152 (408)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~~~~~~~~-~-------~~~~~~~~~~~~l 152 (408)
++.||+++++.++ +++....... .++|++|. ++..+++.+... . .+.....+++.++
T Consensus 130 ~~~f~~~~a~~~~-~~~~~~~~~~----------~~~pglp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl 198 (442)
T PLN02208 130 SVSYIIVSATTIA-HTHVPGGKLG----------VPPPGYPSSKVLFRENDAHALATLSIFYKRLYHQITTGLKSCDVIA 198 (442)
T ss_pred EEEEEhhhHHHHH-HHccCccccC----------CCCCCCCCcccccCHHHcCcccccchHHHHHHHHHHhhhccCCEEE
Confidence 9999999988654 3332211100 12566653 345556643111 0 1223456789999
Q ss_pred ccchhhccHHHHHHhhcc--CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCc
Q 045998 153 GSSFYELEENVVASMATF--TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSL 230 (408)
Q Consensus 153 vnt~~~le~~~~~~~~~~--~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~ 230 (408)
+|||++||+.++++++.. ++++.|||+++... ....+++++.+|||+++++|||||||||+
T Consensus 199 ~Ntf~eLE~~~~~~~~~~~~~~v~~vGpl~~~~~-----------------~~~~~~~~~~~wLd~~~~~sVvyvSfGS~ 261 (442)
T PLN02208 199 LRTCKEIEGKFCDYISRQYHKKVLLTGPMFPEPD-----------------TSKPLEEQWSHFLSGFPPKSVVFCSLGSQ 261 (442)
T ss_pred EECHHHHHHHHHHHHHhhcCCCEEEEeecccCcC-----------------CCCCCHHHHHHHHhcCCCCcEEEEecccc
Confidence 999999999999988643 45999999975420 00113445559999998899999999999
Q ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEecC-Cc-ccccccchhhhhhcCCCeEEE-ecccHHHHhcccCcceEEeccCcch
Q 045998 231 LVLSQNQIDSIAAALINTKRPFLWVIRSQ-EN-KEGGVLRAGFLEETKDRGLVV-KWCSQEKVLMHAAVSCFLTHCGWNS 307 (408)
Q Consensus 231 ~~~~~~~~~~~~~al~~~~~~~iw~~~~~-~~-~~~~~lp~~~~~~~~~n~~v~-~w~pq~~lL~h~~v~~fitHgG~~s 307 (408)
..++.+++.+++.+|+..+++|+|+++.. +. .....+|++|.+++.+++.++ +|+||.+||+|+++|+|||||||||
T Consensus 262 ~~l~~~q~~e~~~~l~~s~~pf~wv~r~~~~~~~~~~~lp~~f~~r~~~~g~~v~~W~PQ~~iL~H~~v~~FvtHcG~nS 341 (442)
T PLN02208 262 IILEKDQFQELCLGMELTGLPFLIAVKPPRGSSTVQEGLPEGFEERVKGRGVVWGGWVQQPLILDHPSIGCFVNHCGPGT 341 (442)
T ss_pred ccCCHHHHHHHHHHHHhCCCcEEEEEeCCCcccchhhhCCHHHHHHHhcCCcEeeccCCHHHHhcCCccCeEEccCCchH
Confidence 99999999999999999999999999864 11 111368999999987666555 9999999999999999999999999
Q ss_pred HHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC--cHHHHHHHHHHHHHHHH
Q 045998 308 TLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL--NATQMKKRAVAWKEAAK 385 (408)
Q Consensus 308 ~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~--~~~~~~~~a~~l~~~~~ 385 (408)
++||+++|||||+||+++||+.||+++++++|+|+.+....++.+++++|+++|+++|+++ +++.+|+||+++++.+.
T Consensus 342 ~~Eai~~GVP~l~~P~~~DQ~~na~~~~~~~g~gv~~~~~~~~~~~~~~l~~ai~~~m~~~~e~g~~~r~~~~~~~~~~~ 421 (442)
T PLN02208 342 IWESLVSDCQMVLIPFLSDQVLFTRLMTEEFEVSVEVSREKTGWFSKESLSNAIKSVMDKDSDLGKLVRSNHTKLKEILV 421 (442)
T ss_pred HHHHHHcCCCEEecCcchhhHHHHHHHHHHhceeEEeccccCCcCcHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHh
Confidence 9999999999999999999999999877669999999752223499999999999999763 48889999999999973
Q ss_pred HHHhcCCChHHHHHHHHHHHHh
Q 045998 386 KALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 386 ~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
.+|||.+++++||+++++
T Consensus 422 ----~~gsS~~~l~~~v~~l~~ 439 (442)
T PLN02208 422 ----SPGLLTGYVDKFVEELQE 439 (442)
T ss_pred ----cCCcHHHHHHHHHHHHHH
Confidence 478999999999999864
No 20
>PLN03007 UDP-glucosyltransferase family protein
Probab=100.00 E-value=9.4e-59 Score=468.00 Aligned_cols=385 Identities=29% Similarity=0.481 Sum_probs=282.5
Q ss_pred CeEEEEcC---CCCCCCccccc--------CHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHc
Q 045998 13 TVQFVFFP---DGLSDDFDRIK--------YVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEH 81 (408)
Q Consensus 13 gi~f~~i~---~glp~~~~~~~--------~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~l 81 (408)
.+.+.++| +++|++.+... +...++..|.. ..+.+.+.++++.+. .++||||+|.++.|+..+|+++
T Consensus 65 ~~~~~~~p~~~~glP~g~e~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~l~~~l~~-~~~~~IV~D~~~~w~~~vA~~l 142 (482)
T PLN03007 65 DIQIFNFPCVELGLPEGCENVDFITSNNNDDSGDLFLKFLF-STKYFKDQLEKLLET-TRPDCLVADMFFPWATEAAEKF 142 (482)
T ss_pred eEEEeeCCCCcCCCCCCcccccccccccccchHHHHHHHHH-HHHHHHHHHHHHHhc-CCCCEEEECCcchhHHHHHHHh
Confidence 56666777 68998765432 12244444442 233444444444332 3689999999999999999999
Q ss_pred CCCeEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCC---cccCCCCCCCCCh-------hHHhhhcccceE
Q 045998 82 KIPCAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPS---LLVNELPSSLLPS-------DFVQKLDKVKWI 151 (408)
Q Consensus 82 gIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~---~~~~~~~~~~~~~-------~~~~~~~~~~~~ 151 (408)
|||++.||+++++.+..++............ .....+.+|++|. +...+++..-... ...+...+++.+
T Consensus 143 gIP~v~f~~~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v 221 (482)
T PLN03007 143 GVPRLVFHGTGYFSLCASYCIRVHKPQKKVA-SSSEPFVIPDLPGDIVITEEQINDADEESPMGKFMKEVRESEVKSFGV 221 (482)
T ss_pred CCCeEEeecccHHHHHHHHHHHhcccccccC-CCCceeeCCCCCCccccCHHhcCCCCCchhHHHHHHHHHhhcccCCEE
Confidence 9999999999988877766543221110000 0011234677752 2233333221111 222345668899
Q ss_pred EccchhhccHHHHHHhhcc--CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCC
Q 045998 152 LGSSFYELEENVVASMATF--TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGS 229 (408)
Q Consensus 152 lvnt~~~le~~~~~~~~~~--~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS 229 (408)
++||+.+||+++.+.+++. .++++|||+.+...... .....+......+.+|+ +||++++++|||||||||
T Consensus 222 l~Nt~~~le~~~~~~~~~~~~~~~~~VGPl~~~~~~~~--~~~~~~~~~~~~~~~~~-----~wLd~~~~~svvyvsfGS 294 (482)
T PLN03007 222 LVNSFYELESAYADFYKSFVAKRAWHIGPLSLYNRGFE--EKAERGKKANIDEQECL-----KWLDSKKPDSVIYLSFGS 294 (482)
T ss_pred EEECHHHHHHHHHHHHHhccCCCEEEEccccccccccc--cccccCCccccchhHHH-----HHHhcCCCCceEEEeecC
Confidence 9999999999988888764 46999999865321000 00000101111123355 999999889999999999
Q ss_pred cccCCHHHHHHHHHHHHhCCCCEEEEEecCCc--ccccccchhhhhhcC-CCeEEEecccHHHHhcccCcceEEeccCcc
Q 045998 230 LLVLSQNQIDSIAAALINTKRPFLWVIRSQEN--KEGGVLRAGFLEETK-DRGLVVKWCSQEKVLMHAAVSCFLTHCGWN 306 (408)
Q Consensus 230 ~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~--~~~~~lp~~~~~~~~-~n~~v~~w~pq~~lL~h~~v~~fitHgG~~ 306 (408)
+..++.+++.+++.+|+.++++|||+++.... .....+|++|.+++. .|+++.+|+||.+||+|+++++||||||||
T Consensus 295 ~~~~~~~~~~~~~~~l~~~~~~flw~~~~~~~~~~~~~~lp~~~~~r~~~~g~~v~~w~PQ~~iL~h~~v~~fvtH~G~n 374 (482)
T PLN03007 295 VASFKNEQLFEIAAGLEGSGQNFIWVVRKNENQGEKEEWLPEGFEERTKGKGLIIRGWAPQVLILDHQATGGFVTHCGWN 374 (482)
T ss_pred CcCCCHHHHHHHHHHHHHCCCCEEEEEecCCcccchhhcCCHHHHHHhccCCEEEecCCCHHHHhccCccceeeecCcch
Confidence 99889999999999999999999999986421 111258889988875 455666999999999999999999999999
Q ss_pred hHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecC-----CCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 045998 307 STLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNE-----EDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWK 381 (408)
Q Consensus 307 s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~-----~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~ 381 (408)
|++||+++|||||+||+++||+.||+++++.+++|+.+... ....+++++|+++|+++|.++++++||+||++++
T Consensus 375 S~~Eal~~GVP~v~~P~~~DQ~~na~~~~~~~~~G~~~~~~~~~~~~~~~~~~~~l~~av~~~m~~~~~~~~r~~a~~~~ 454 (482)
T PLN03007 375 SLLEGVAAGLPMVTWPVGAEQFYNEKLVTQVLRTGVSVGAKKLVKVKGDFISREKVEKAVREVIVGEEAEERRLRAKKLA 454 (482)
T ss_pred HHHHHHHcCCCeeeccchhhhhhhHHHHHHhhcceeEeccccccccccCcccHHHHHHHHHHHhcCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999988656777665321 1256899999999999999877889999999999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 382 EAAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 382 ~~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
+.+++|+.+||||.+++++||+++++
T Consensus 455 ~~a~~a~~~gGsS~~~l~~~v~~~~~ 480 (482)
T PLN03007 455 EMAKAAVEEGGSSFNDLNKFMEELNS 480 (482)
T ss_pred HHHHHHHhCCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999976
No 21
>PLN00414 glycosyltransferase family protein
Probab=100.00 E-value=4.6e-59 Score=463.33 Aligned_cols=359 Identities=21% Similarity=0.360 Sum_probs=273.5
Q ss_pred CeEEEEc--C--CCCCCCcccccCHHHH-HHHHH---HHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCC
Q 045998 13 TVQFVFF--P--DGLSDDFDRIKYVGAF-IESLQ---KVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIP 84 (408)
Q Consensus 13 gi~f~~i--~--~glp~~~~~~~~~~~~-~~~~~---~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP 84 (408)
+|+|+++ | +|+|++.+...+.... ...+. ..+.+.++++++. .++||||+| +++|+.++|+++|||
T Consensus 56 ~i~~~~i~lP~~dGLP~g~e~~~~l~~~~~~~~~~a~~~l~~~l~~~L~~-----~~p~cVV~D-~~~wa~~vA~~lgIP 129 (446)
T PLN00414 56 SIVFEPLTLPPVDGLPFGAETASDLPNSTKKPIFDAMDLLRDQIEAKVRA-----LKPDLIFFD-FVHWVPEMAKEFGIK 129 (446)
T ss_pred ceEEEEecCCCcCCCCCcccccccchhhHHHHHHHHHHHHHHHHHHHHhc-----CCCeEEEEC-CchhHHHHHHHhCCC
Confidence 5899655 4 8999886554333221 11222 2334444444433 367999999 489999999999999
Q ss_pred eEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCC----cccCC--CCCCCCCh-----hHHhhhcccceEEc
Q 045998 85 CAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPS----LLVNE--LPSSLLPS-----DFVQKLDKVKWILG 153 (408)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~----~~~~~--~~~~~~~~-----~~~~~~~~~~~~lv 153 (408)
++.||+++++.++++++..... . .++|++|. ++..+ ++.++... +..+.+.+++++++
T Consensus 130 ~~~F~~~~a~~~~~~~~~~~~~-~----------~~~pg~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vlv 198 (446)
T PLN00414 130 SVNYQIISAACVAMVLAPRAEL-G----------FPPPDYPLSKVALRGHDANVCSLFANSHELFGLITKGLKNCDVVSI 198 (446)
T ss_pred EEEEecHHHHHHHHHhCcHhhc-C----------CCCCCCCCCcCcCchhhcccchhhcccHHHHHHHHHhhccCCEEEE
Confidence 9999999999888776532110 0 11344442 22222 22333211 33455667899999
Q ss_pred cchhhccHHHHHHhhcc--CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcc
Q 045998 154 SSFYELEENVVASMATF--TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLL 231 (408)
Q Consensus 154 nt~~~le~~~~~~~~~~--~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~ 231 (408)
|||++||+.+++++++. +|++.|||+++... ...+ ...+++|+ +|||+++++|||||||||..
T Consensus 199 NTf~eLE~~~~~~~~~~~~~~v~~VGPl~~~~~-------~~~~---~~~~~~~~-----~WLD~q~~~sVvyvsfGS~~ 263 (446)
T PLN00414 199 RTCVELEGNLCDFIERQCQRKVLLTGPMLPEPQ-------NKSG---KPLEDRWN-----HWLNGFEPGSVVFCAFGTQF 263 (446)
T ss_pred echHHHHHHHHHHHHHhcCCCeEEEcccCCCcc-------cccC---cccHHHHH-----HHHhcCCCCceEEEeecccc
Confidence 99999999999998764 46999999975320 0001 01124578 99999999999999999999
Q ss_pred cCCHHHHHHHHHHHHhCCCCEEEEEecCCc--ccccccchhhhhhcCCCeEEE-ecccHHHHhcccCcceEEeccCcchH
Q 045998 232 VLSQNQIDSIAAALINTKRPFLWVIRSQEN--KEGGVLRAGFLEETKDRGLVV-KWCSQEKVLMHAAVSCFLTHCGWNST 308 (408)
Q Consensus 232 ~~~~~~~~~~~~al~~~~~~~iw~~~~~~~--~~~~~lp~~~~~~~~~n~~v~-~w~pq~~lL~h~~v~~fitHgG~~s~ 308 (408)
.++.+++.+++.+|+.++++|+|+++.... .....+|++|.++++++++++ +|+||.+||+|+++++|||||||||+
T Consensus 264 ~~~~~q~~e~a~gL~~s~~~Flwvvr~~~~~~~~~~~lp~~f~~r~~~~g~vv~~w~PQ~~vL~h~~v~~fvtH~G~nS~ 343 (446)
T PLN00414 264 FFEKDQFQEFCLGMELTGLPFLIAVMPPKGSSTVQEALPEGFEERVKGRGIVWEGWVEQPLILSHPSVGCFVNHCGFGSM 343 (446)
T ss_pred cCCHHHHHHHHHHHHHcCCCeEEEEecCCCcccchhhCChhHHHHhcCCCeEEeccCCHHHHhcCCccceEEecCchhHH
Confidence 999999999999999999999999986311 112368999999999999888 89999999999999999999999999
Q ss_pred HHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC--CcHHHHHHHHHHHHHHHHH
Q 045998 309 LETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG--LNATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 309 ~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~--~~~~~~~~~a~~l~~~~~~ 386 (408)
+||+++|||||+||+++||+.||+++++++|+|+++....++.+++++|+++|+++|.+ ++++.+|+||+++++.+
T Consensus 344 ~Ea~~~GvP~l~~P~~~dQ~~na~~~~~~~g~g~~~~~~~~~~~~~~~i~~~v~~~m~~~~e~g~~~r~~a~~~~~~~-- 421 (446)
T PLN00414 344 WESLVSDCQIVFIPQLADQVLITRLLTEELEVSVKVQREDSGWFSKESLRDTVKSVMDKDSEIGNLVKRNHKKLKETL-- 421 (446)
T ss_pred HHHHHcCCCEEecCcccchHHHHHHHHHHhCeEEEeccccCCccCHHHHHHHHHHHhcCChhhHHHHHHHHHHHHHHH--
Confidence 99999999999999999999999999755999999964212369999999999999976 45778999999999986
Q ss_pred HHhcCCChHHHHHHHHHHHHh
Q 045998 387 ALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 387 a~~~gg~s~~~~~~~v~~l~~ 407 (408)
.++||+| ..+++||+++++
T Consensus 422 -~~~gg~s-s~l~~~v~~~~~ 440 (446)
T PLN00414 422 -VSPGLLS-GYADKFVEALEN 440 (446)
T ss_pred -HcCCCcH-HHHHHHHHHHHH
Confidence 3566644 448999999864
No 22
>PHA03392 egt ecdysteroid UDP-glucosyltransferase; Provisional
Probab=100.00 E-value=3.7e-44 Score=362.67 Aligned_cols=276 Identities=18% Similarity=0.218 Sum_probs=221.5
Q ss_pred CCccEEEECCCCCcHHHHHHHc-CCCeEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCCcccCCCCCCCCC
Q 045998 60 KKKSCIITNPFMPWVPDVAAEH-KIPCAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPSLLVNELPSSLLP 138 (408)
Q Consensus 60 ~~~D~vI~D~~~~~~~~vA~~l-gIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~ 138 (408)
.+||+||+|.+..|+..+|+++ ++|.|.+++........ . ...+.| .....+|.+ .....+.|+|++|
T Consensus 135 ~kFDlvi~e~~~~c~~~la~~~~~~p~i~~ss~~~~~~~~--~---~~gg~p-----~~~syvP~~-~~~~~~~Msf~~R 203 (507)
T PHA03392 135 NKFDLLVTEAFLDYPLVFSHLFGDAPVIQISSGYGLAENF--E---TMGAVS-----RHPVYYPNL-WRSKFGNLNVWET 203 (507)
T ss_pred CceeEEEecccchhHHHHHHHhCCCCEEEEcCCCCchhHH--H---hhccCC-----CCCeeeCCc-ccCCCCCCCHHHH
Confidence 5799999999989999999999 99988776644322211 1 111122 112235654 3466688888887
Q ss_pred h-------------------------h--------HHhhhcccceEEccchhhccHHHHHHhhccCC-ceeeCCCCCccc
Q 045998 139 S-------------------------D--------FVQKLDKVKWILGSSFYELEENVVASMATFTP-IIPVGPLVSPFM 184 (408)
Q Consensus 139 ~-------------------------~--------~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~p-~~~vGpl~~~~~ 184 (408)
. . ..+...+++++++|+.+.++++ ++.+| +.+|||+....
T Consensus 204 ~~N~~~~~~~~~~~~~~~~~~~~l~~~~f~~~~~~~~~l~~~~~l~lvns~~~~d~~-----rp~~p~v~~vGgi~~~~- 277 (507)
T PHA03392 204 INEIYTELRLYNEFSLLADEQNKLLKQQFGPDTPTIRELRNRVQLLFVNVHPVFDNN-----RPVPPSVQYLGGLHLHK- 277 (507)
T ss_pred HHHHHHHHHHHHHHHHhhHHHHHHHHHHcCCCCCCHHHHHhCCcEEEEecCccccCC-----CCCCCCeeeecccccCC-
Confidence 6 0 1112234578999999977765 66655 99999996531
Q ss_pred cCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCccc---CCHHHHHHHHHHHHhCCCCEEEEEecCCc
Q 045998 185 LGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLV---LSQNQIDSIAAALINTKRPFLWVIRSQEN 261 (408)
Q Consensus 185 ~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~---~~~~~~~~~~~al~~~~~~~iw~~~~~~~ 261 (408)
...+.+|+++.+|++++ ++++|||||||+.. ++.+.++.+++++++.+++|||+++....
T Consensus 278 ----------------~~~~~l~~~l~~fl~~~-~~g~V~vS~GS~~~~~~~~~~~~~~~l~a~~~l~~~viw~~~~~~~ 340 (507)
T PHA03392 278 ----------------KPPQPLDDYLEEFLNNS-TNGVVYVSFGSSIDTNDMDNEFLQMLLRTFKKLPYNVLWKYDGEVE 340 (507)
T ss_pred ----------------CCCCCCCHHHHHHHhcC-CCcEEEEECCCCCcCCCCCHHHHHHHHHHHHhCCCeEEEEECCCcC
Confidence 01245788999999986 45899999999863 57899999999999999999999875321
Q ss_pred ccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeE
Q 045998 262 KEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIG 341 (408)
Q Consensus 262 ~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G 341 (408)
+ ...++|+++.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++++ +|+|
T Consensus 341 ------~----~~~p~Nv~i~~w~Pq~~lL~hp~v~~fItHGG~~s~~Eal~~GvP~v~iP~~~DQ~~Na~rv~~-~G~G 409 (507)
T PHA03392 341 ------A----INLPANVLTQKWFPQRAVLKHKNVKAFVTQGGVQSTDEAIDALVPMVGLPMMGDQFYNTNKYVE-LGIG 409 (507)
T ss_pred ------c----ccCCCceEEecCCCHHHHhcCCCCCEEEecCCcccHHHHHHcCCCEEECCCCccHHHHHHHHHH-cCcE
Confidence 1 1235899999999999999999999999999999999999999999999999999999999998 9999
Q ss_pred EEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 045998 342 VRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 342 ~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 386 (408)
+.+++ ..++.++|.++|++++++ ++||+||+++++.+++
T Consensus 410 ~~l~~---~~~t~~~l~~ai~~vl~~---~~y~~~a~~ls~~~~~ 448 (507)
T PHA03392 410 RALDT---VTVSAAQLVLAIVDVIEN---PKYRKNLKELRHLIRH 448 (507)
T ss_pred EEecc---CCcCHHHHHHHHHHHhCC---HHHHHHHHHHHHHHHh
Confidence 99987 789999999999999998 8999999999999987
No 23
>PF00201 UDPGT: UDP-glucoronosyl and UDP-glucosyl transferase; InterPro: IPR002213 UDP glycosyltransferases (UGT) are a superfamily of enzymes that catalyzes the addition of the glycosyl group from a UTP-sugar to a small hydrophobic molecule. This family currently consist of: Mammalian UDP-glucuronosyl transferases (2.4.1.17 from EC) (UDPGT) []. A large family of membrane-bound microsomal enzymes which catalyze the transfer of glucuronic acid to a wide variety of exogenous and endogenous lipophilic substrates. These enzymes are of major importance in the detoxification and subsequent elimination of xenobiotics such as drugs and carcinogens. A large number of putative UDPGT from Caenorhabditis elegans. Mammalian 2-hydroxyacylsphingosine 1-beta-galactosyltransferase [] (2.4.1.45 from EC) (also known as UDP-galactose-ceramide galactosyltransferase). This enzyme catalyzes the transfer of galactose to ceramide, a key enzymatic step in the biosynthesis of galactocerebrosides, which are abundant sphingolipids of the myelin membrane of the central nervous system and peripheral nervous system. Plants flavonol O(3)-glucosyltransferase (2.4.1.91 from EC). An enzyme [] that catalyzes the transfer of glucose from UDP-glucose to a flavanol. This reaction is essential and one of the last steps in anthocyanin pigment biosynthesis. Baculoviruses ecdysteroid UDP-glucosyltransferase (2.4.1 from EC) [] (egt). This enzyme catalyzes the transfer of glucose from UDP-glucose to ectysteroids which are insect molting hormones. The expression of egt in the insect host interferes with the normal insect development by blocking the molting process. Prokaryotic zeaxanthin glucosyltransferase (2.4.1 from EC) (gene crtX), an enzyme involved in carotenoid biosynthesis and that catalyses the glycosylation reaction which converts zeaxanthin to zeaxanthin-beta-diglucoside. Streptomyces macrolide glycosyltransferases (2.4.1 from EC) []. These enzymes specifically inactivates macrolide anitibiotics via 2'-O-glycosylation using UDP-glucose. These enzymes share a conserved domain of about 50 amino acid residues located in their C-terminal section.; GO: 0016758 transferase activity, transferring hexosyl groups, 0008152 metabolic process; PDB: 3HBJ_A 3HBF_A 2PQ6_A 3IA7_B 3RSC_A 3IAA_B 2IYA_A 2IYF_B 2O6L_A 2VCH_A ....
Probab=100.00 E-value=2e-46 Score=383.05 Aligned_cols=275 Identities=24% Similarity=0.354 Sum_probs=198.1
Q ss_pred CCccEEEECCCCCcHHHHHHHcCCCeEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCCcccCCCCCCCCCh
Q 045998 60 KKKSCIITNPFMPWVPDVAAEHKIPCAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPSLLVNELPSSLLPS 139 (408)
Q Consensus 60 ~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~ 139 (408)
.+||++|+|.+..|+..+|+.+++|.+.+.+..... .......+ .|..+..+|.. .....+.+++++|.
T Consensus 118 ~~fDlvI~d~f~~c~~~la~~l~iP~i~~~s~~~~~-----~~~~~~~g-----~p~~psyvP~~-~s~~~~~msf~~Ri 186 (500)
T PF00201_consen 118 EKFDLVISDAFDPCGLALAHYLGIPVIIISSSTPMY-----DLSSFSGG-----VPSPPSYVPSM-FSDFSDRMSFWQRI 186 (500)
T ss_dssp HHHCT-EEEEEESSHHHHHHHHHHTHHHHHHCCSCS-----CCTCCTSC-----CCTSTTSTTCB-CCCSGTTSSSST--
T ss_pred hccccceEeeccchhHHHHHHhcCCeEEEecccccc-----hhhhhccC-----CCCChHHhccc-cccCCCccchhhhh
Confidence 369999999999999999999999987653322110 00000001 12222224443 23456677887765
Q ss_pred --------------------------------hHHhhhcccceEEccchhhccHHHHHHhhccCC-ceeeCCCCCccccC
Q 045998 140 --------------------------------DFVQKLDKVKWILGSSFYELEENVVASMATFTP-IIPVGPLVSPFMLG 186 (408)
Q Consensus 140 --------------------------------~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~p-~~~vGpl~~~~~~~ 186 (408)
...+.+.+++++++|+.+.++.+ ++..| +.+||++....
T Consensus 187 ~N~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~l~ns~~~ld~p-----rp~~p~v~~vGgl~~~~--- 258 (500)
T PF00201_consen 187 KNFLFYLYFRFIFRYFFSPQDKLYKKYFGFPFSFRELLSNASLVLINSHPSLDFP-----RPLLPNVVEVGGLHIKP--- 258 (500)
T ss_dssp TTSHHHHHHHHHHHHGGGS-TTS-EEESS-GGGCHHHHHHHHHCCSSTEEE---------HHHHCTSTTGCGC-S-----
T ss_pred hhhhhhhhhccccccchhhHHHHHhhhcccccccHHHHHHHHHHhhhccccCcCC-----cchhhcccccCcccccc---
Confidence 11122234567788888876655 34433 88999986431
Q ss_pred CCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCccc-CCHHHHHHHHHHHHhCCCCEEEEEecCCccccc
Q 045998 187 KQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLV-LSQNQIDSIAAALINTKRPFLWVIRSQENKEGG 265 (408)
Q Consensus 187 ~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~ 265 (408)
.+.+|+++..|+++..+++||||||||+.. ++.+..++++++|++.+++|||+++.....
T Consensus 259 ----------------~~~l~~~~~~~~~~~~~~~vv~vsfGs~~~~~~~~~~~~~~~~~~~~~~~~iW~~~~~~~~--- 319 (500)
T PF00201_consen 259 ----------------AKPLPEELWNFLDSSGKKGVVYVSFGSIVSSMPEEKLKEIAEAFENLPQRFIWKYEGEPPE--- 319 (500)
T ss_dssp ------------------TCHHHHHHHTSTTTTTEEEEEE-TSSSTT-HHHHHHHHHHHHHCSTTEEEEEETCSHGC---
T ss_pred ----------------ccccccccchhhhccCCCCEEEEecCcccchhHHHHHHHHHHHHhhCCCcccccccccccc---
Confidence 346789999999985678999999999984 556668999999999999999999873222
Q ss_pred ccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEee
Q 045998 266 VLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMR 345 (408)
Q Consensus 266 ~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 345 (408)
.+ ++|+++.+|+||.+||+|+++++||||||+||++||+++|||||++|+++||+.||+++++ .|+|+.++
T Consensus 320 ~l--------~~n~~~~~W~PQ~~lL~hp~v~~fitHgG~~s~~Ea~~~gvP~l~~P~~~DQ~~na~~~~~-~G~g~~l~ 390 (500)
T PF00201_consen 320 NL--------PKNVLIVKWLPQNDLLAHPRVKLFITHGGLNSTQEALYHGVPMLGIPLFGDQPRNAARVEE-KGVGVVLD 390 (500)
T ss_dssp HH--------HTTEEEESS--HHHHHTSTTEEEEEES--HHHHHHHHHCT--EEE-GCSTTHHHHHHHHHH-TTSEEEEG
T ss_pred cc--------cceEEEeccccchhhhhcccceeeeeccccchhhhhhhccCCccCCCCcccCCccceEEEE-EeeEEEEE
Confidence 33 3899999999999999999999999999999999999999999999999999999999999 99999999
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 045998 346 NEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKA 387 (408)
Q Consensus 346 ~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a 387 (408)
+ ..++.++|.++|+++|+| ++|++||+++++.+++.
T Consensus 391 ~---~~~~~~~l~~ai~~vl~~---~~y~~~a~~ls~~~~~~ 426 (500)
T PF00201_consen 391 K---NDLTEEELRAAIREVLEN---PSYKENAKRLSSLFRDR 426 (500)
T ss_dssp G---GC-SHHHHHHHHHHHHHS---HHHHHHHHHHHHTTT--
T ss_pred e---cCCcHHHHHHHHHHHHhh---hHHHHHHHHHHHHHhcC
Confidence 8 899999999999999999 89999999999999874
No 24
>KOG1192 consensus UDP-glucuronosyl and UDP-glucosyl transferase [Carbohydrate transport and metabolism; Energy production and conversion]
Probab=100.00 E-value=2e-37 Score=316.32 Aligned_cols=300 Identities=27% Similarity=0.349 Sum_probs=204.8
Q ss_pred HHHHHHhhHHHHHHHHHhhc-CCCCccEEEECCCCCcHHHHHHHcC-CCeEEEecchhHHHHHHHHhhcCCCCCCCCCCC
Q 045998 38 ESLQKVGSKNLSSIINNLSN-NDKKKSCIITNPFMPWVPDVAAEHK-IPCAVLWIQACAAYYIYYHYFKHPQLFPSLENP 115 (408)
Q Consensus 38 ~~~~~~~~~~l~~ll~~l~~-~~~~~D~vI~D~~~~~~~~vA~~lg-IP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 115 (408)
..+...+...+.+.+..+.. ...+||++|+|.+..|...+|.... |+..++++.++....+..+.....
T Consensus 90 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~d~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~g~~~~~~~--------- 160 (496)
T KOG1192|consen 90 LELNKTCEDLLRDPLEKLLLLKSEKFDLIISDPFLGLFLLLAIPSFVIPLLSFPTSSAVLLALGLPSPLSY--------- 160 (496)
T ss_pred HHHHHHHHHHHhchHHHHHHhhcCCccEEEechhhHHHHHhcccceEEEeecccCchHHHHhcCCcCcccc---------
Confidence 34444455555554444332 2234999999999888888887775 999988887776655433221111
Q ss_pred CccccCCCCCCcccCCCCCCCCCh-------------------------------------hHHhhhcccceEEccchhh
Q 045998 116 NEAVHLPAMPSLLVNELPSSLLPS-------------------------------------DFVQKLDKVKWILGSSFYE 158 (408)
Q Consensus 116 ~~~~~~p~~~~~~~~~~~~~~~~~-------------------------------------~~~~~~~~~~~~lvnt~~~ 158 (408)
+|........+.+++..+. ...+.+.+++..++|+..-
T Consensus 161 -----~p~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ln~~~~ 235 (496)
T KOG1192|consen 161 -----VPSPFSLSSGDDMSFPERVPNLIKKDLPSFLFSLSDDRKQDKISKELLGDILNWKPTASGIIVNASFIFLNSNPL 235 (496)
T ss_pred -----cCcccCccccccCcHHHHHHHHHHHHHHHHHHHHhhhHHHHHHHHHhCCCcccccccHHHhhhcCeEEEEccCcc
Confidence 1111000000111111111 0111222333444444442
Q ss_pred ccHHHHHHhhc-cCCceeeCCCCCccccCCCCCCCCCCCCCccccc-ccchhhhhhhhccCCCC--ceEEEecCCcc---
Q 045998 159 LEENVVASMAT-FTPIIPVGPLVSPFMLGKQENATAPSLDMWSTAE-ECSCIEIHQWLNKKPPS--SVIYISFGSLL--- 231 (408)
Q Consensus 159 le~~~~~~~~~-~~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~-~~l~~~l~~~l~~~~~~--~vvyvs~GS~~--- 231 (408)
++.. .++ .+++++|||+..... +... .|. +|++..+.. +||||||||+.
T Consensus 236 ~~~~----~~~~~~~v~~IG~l~~~~~---------------~~~~~~~~-----~wl~~~~~~~~~vvyvSfGS~~~~~ 291 (496)
T KOG1192|consen 236 LDFE----PRPLLPKVIPIGPLHVKDS---------------KQKSPLPL-----EWLDILDESRHSVVYISFGSMVNSA 291 (496)
T ss_pred cCCC----CCCCCCCceEECcEEecCc---------------cccccccH-----HHHHHHhhccCCeEEEECCcccccc
Confidence 2221 122 244999999976521 0001 244 777766554 89999999999
Q ss_pred cCCHHHHHHHHHHHHhC-CCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHH-hcccCcceEEeccCcchHH
Q 045998 232 VLSQNQIDSIAAALINT-KRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKV-LMHAAVSCFLTHCGWNSTL 309 (408)
Q Consensus 232 ~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~l-L~h~~v~~fitHgG~~s~~ 309 (408)
.++.++..+++.+|++. +++|+|+++..... .+++++.++-++|+...+|+||.++ |.|+++++||||||||||+
T Consensus 292 ~lp~~~~~~l~~~l~~~~~~~FiW~~~~~~~~---~~~~~~~~~~~~nV~~~~W~PQ~~lll~H~~v~~FvTHgG~nSt~ 368 (496)
T KOG1192|consen 292 DLPEEQKKELAKALESLQGVTFLWKYRPDDSI---YFPEGLPNRGRGNVVLSKWAPQNDLLLDHPAVGGFVTHGGWNSTL 368 (496)
T ss_pred cCCHHHHHHHHHHHHhCCCceEEEEecCCcch---hhhhcCCCCCcCceEEecCCCcHHHhcCCCcCcEEEECCcccHHH
Confidence 79999999999999999 88899999975432 2344443322467888899999999 5999999999999999999
Q ss_pred HHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 045998 310 ETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAK 385 (408)
Q Consensus 310 eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 385 (408)
|++++|||||++|+++||+.||+++++ .|.|..+.+ ..++.+.+..++.+++.+ ++|+++|+++++..+
T Consensus 369 E~~~~GvP~v~~Plf~DQ~~Na~~i~~-~g~~~v~~~---~~~~~~~~~~~~~~il~~---~~y~~~~~~l~~~~~ 437 (496)
T KOG1192|consen 369 ESIYSGVPMVCVPLFGDQPLNARLLVR-HGGGGVLDK---RDLVSEELLEAIKEILEN---EEYKEAAKRLSEILR 437 (496)
T ss_pred HHHhcCCceecCCccccchhHHHHHHh-CCCEEEEeh---hhcCcHHHHHHHHHHHcC---hHHHHHHHHHHHHHH
Confidence 999999999999999999999999999 555555554 556666699999999998 899999999999876
No 25
>TIGR01426 MGT glycosyltransferase, MGT family. This model describes the MGT (macroside glycosyltransferase) subfamily of the UDP-glucuronosyltransferase family. Members include a number of glucosyl transferases for macrolide antibiotic inactivation, but also include transferases of glucose-related sugars for macrolide antibiotic production.
Probab=100.00 E-value=4.3e-33 Score=276.21 Aligned_cols=318 Identities=17% Similarity=0.223 Sum_probs=216.0
Q ss_pred cCCCCCCCeEEEEcCCCCCCCccc----ccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHc
Q 045998 6 ATRITESTVQFVFFPDGLSDDFDR----IKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEH 81 (408)
Q Consensus 6 ~~~i~~~gi~f~~i~~glp~~~~~----~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~l 81 (408)
...+++.|++|+++++.++..... ..+...++..+...+...+..+++.+.+ .+||+||+|.+++|+..+|+++
T Consensus 35 ~~~v~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~--~~pDlVi~d~~~~~~~~~A~~~ 112 (392)
T TIGR01426 35 AERVEAAGAEFVLYGSALPPPDNPPENTEEEPIDIIEKLLDEAEDVLPQLEEAYKG--DRPDLIVYDIASWTGRLLARKW 112 (392)
T ss_pred HHHHHHcCCEEEecCCcCccccccccccCcchHHHHHHHHHHHHHHHHHHHHHhcC--CCCCEEEECCccHHHHHHHHHh
Confidence 345677899999998655431100 0233444455555445555555554433 5799999999989999999999
Q ss_pred CCCeEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCCcccCCCCC-CCCCh-----hHH----------hh-
Q 045998 82 KIPCAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPSLLVNELPS-SLLPS-----DFV----------QK- 144 (408)
Q Consensus 82 gIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~-~~~~~-----~~~----------~~- 144 (408)
|||+|.+++..... ..+..... |.. +.+ +....... .+... ... ..
T Consensus 113 giP~v~~~~~~~~~----~~~~~~~~--~~~---------~~~--~~~~~~~~~~~~~~~~~~~~~r~~~gl~~~~~~~~ 175 (392)
T TIGR01426 113 DVPVISSFPTFAAN----EEFEEMVS--PAG---------EGS--AEEGAIAERGLAEYVARLSALLEEHGITTPPVEFL 175 (392)
T ss_pred CCCEEEEehhhccc----cccccccc--ccc---------hhh--hhhhccccchhHHHHHHHHHHHHHhCCCCCCHHHH
Confidence 99999885432211 00000000 000 000 00000000 00000 000 00
Q ss_pred -hcccceEEccchhhccHHHHHHhhccCC-ceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCce
Q 045998 145 -LDKVKWILGSSFYELEENVVASMATFTP-IIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSV 222 (408)
Q Consensus 145 -~~~~~~~lvnt~~~le~~~~~~~~~~~p-~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~v 222 (408)
....+..++.+.+.|+++.. ..++ ++++||+.... .+.. .|+...+++++
T Consensus 176 ~~~~~~~~l~~~~~~l~~~~~----~~~~~~~~~Gp~~~~~-------------------~~~~-----~~~~~~~~~~~ 227 (392)
T TIGR01426 176 AAPRRDLNLVYTPKAFQPAGE----TFDDSFTFVGPCIGDR-------------------KEDG-----SWERPGDGRPV 227 (392)
T ss_pred hcCCcCcEEEeCChHhCCCcc----ccCCCeEEECCCCCCc-------------------cccC-----CCCCCCCCCCE
Confidence 11223345555555544321 1222 89999986531 1112 56666667889
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEec
Q 045998 223 IYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTH 302 (408)
Q Consensus 223 vyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitH 302 (408)
|||||||+.....+.++++++++.+.+.+++|.++..... +.+ ...++|+.+.+|+||.++|+|+++ +|||
T Consensus 228 v~vs~Gs~~~~~~~~~~~~~~al~~~~~~~i~~~g~~~~~------~~~-~~~~~~v~~~~~~p~~~ll~~~~~--~I~h 298 (392)
T TIGR01426 228 VLISLGTVFNNQPSFYRTCVEAFRDLDWHVVLSVGRGVDP------ADL-GELPPNVEVRQWVPQLEILKKADA--FITH 298 (392)
T ss_pred EEEecCccCCCCHHHHHHHHHHHhcCCCeEEEEECCCCCh------hHh-ccCCCCeEEeCCCCHHHHHhhCCE--EEEC
Confidence 9999999876666788899999999999999988754211 111 134589999999999999999998 9999
Q ss_pred cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHH
Q 045998 303 CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKE 382 (408)
Q Consensus 303 gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~ 382 (408)
||+||++||+++|+|+|++|...||..|++++++ +|+|+.+.. ..++.++|.++|++++.+ ++|+++++++++
T Consensus 299 gG~~t~~Eal~~G~P~v~~p~~~dq~~~a~~l~~-~g~g~~l~~---~~~~~~~l~~ai~~~l~~---~~~~~~~~~l~~ 371 (392)
T TIGR01426 299 GGMNSTMEALFNGVPMVAVPQGADQPMTARRIAE-LGLGRHLPP---EEVTAEKLREAVLAVLSD---PRYAERLRKMRA 371 (392)
T ss_pred CCchHHHHHHHhCCCEEecCCcccHHHHHHHHHH-CCCEEEecc---ccCCHHHHHHHHHHHhcC---HHHHHHHHHHHH
Confidence 9999999999999999999999999999999998 999999986 688999999999999998 799999999999
Q ss_pred HHHH
Q 045998 383 AAKK 386 (408)
Q Consensus 383 ~~~~ 386 (408)
.+++
T Consensus 372 ~~~~ 375 (392)
T TIGR01426 372 EIRE 375 (392)
T ss_pred HHHH
Confidence 9875
No 26
>cd03784 GT1_Gtf_like This family includes the Gtfs, a group of homologous glycosyltransferases involved in the final stages of the biosynthesis of antibiotics vancomycin and related chloroeremomycin. Gtfs transfer sugar moieties from an activated NDP-sugar donor to the oxidatively cross-linked heptapeptide core of vancomycin group antibiotics. The core structure is important for the bioactivity of the antibiotics.
Probab=99.97 E-value=1.2e-30 Score=259.40 Aligned_cols=159 Identities=19% Similarity=0.268 Sum_probs=134.3
Q ss_pred hhhhhhhhccCCCCceEEEecCCcccC-CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecc
Q 045998 207 CIEIHQWLNKKPPSSVIYISFGSLLVL-SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC 285 (408)
Q Consensus 207 ~~~l~~~l~~~~~~~vvyvs~GS~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~ 285 (408)
+.++..|++. .+++|||+|||+... .......+++++...+.++||+++..... . ...++|+++.+|+
T Consensus 228 ~~~~~~~~~~--~~~~v~v~~Gs~~~~~~~~~~~~~~~a~~~~~~~~i~~~g~~~~~---~------~~~~~~v~~~~~~ 296 (401)
T cd03784 228 PPELWLFLAA--GRPPVYVGFGSMVVRDPEALARLDVEAVATLGQRAILSLGWGGLG---A------EDLPDNVRVVDFV 296 (401)
T ss_pred CHHHHHHHhC--CCCcEEEeCCCCcccCHHHHHHHHHHHHHHcCCeEEEEccCcccc---c------cCCCCceEEeCCC
Confidence 4455688876 457999999999863 45677889999999999999998875322 1 1335899999999
Q ss_pred cHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHh
Q 045998 286 SQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 286 pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl 365 (408)
||.++|+|+++ ||||||+||++|++++|||+|++|...||+.||+++++ .|+|+.+.. ..++.++|.+++++++
T Consensus 297 p~~~ll~~~d~--~I~hgG~~t~~eal~~GvP~v~~P~~~dQ~~~a~~~~~-~G~g~~l~~---~~~~~~~l~~al~~~l 370 (401)
T cd03784 297 PHDWLLPRCAA--VVHHGGAGTTAAALRAGVPQLVVPFFGDQPFWAARVAE-LGAGPALDP---RELTAERLAAALRRLL 370 (401)
T ss_pred CHHHHhhhhhe--eeecCCchhHHHHHHcCCCEEeeCCCCCcHHHHHHHHH-CCCCCCCCc---ccCCHHHHHHHHHHHh
Confidence 99999999999 99999999999999999999999999999999999998 999999986 5689999999999999
Q ss_pred cCCcHHHHHHHHHHHHHHHHH
Q 045998 366 QGLNATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~~~~ 386 (408)
.+ .++++++++.+.+++
T Consensus 371 ~~----~~~~~~~~~~~~~~~ 387 (401)
T cd03784 371 DP----PSRRRAAALLRRIRE 387 (401)
T ss_pred CH----HHHHHHHHHHHHHHh
Confidence 85 456667777666643
No 27
>COG1819 Glycosyl transferases, related to UDP-glucuronosyltransferase [Carbohydrate transport and metabolism / Signal transduction mechanisms]
Probab=99.96 E-value=4.2e-28 Score=239.51 Aligned_cols=164 Identities=20% Similarity=0.318 Sum_probs=144.3
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcce
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSC 298 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~ 298 (408)
++++|||||||+... .+.++.+++++.+.+.+||...+... .....+ ++|+++.+|+||.++|+++++
T Consensus 236 d~~~vyvslGt~~~~-~~l~~~~~~a~~~l~~~vi~~~~~~~-~~~~~~--------p~n~~v~~~~p~~~~l~~ad~-- 303 (406)
T COG1819 236 DRPIVYVSLGTVGNA-VELLAIVLEALADLDVRVIVSLGGAR-DTLVNV--------PDNVIVADYVPQLELLPRADA-- 303 (406)
T ss_pred CCCeEEEEcCCcccH-HHHHHHHHHHHhcCCcEEEEeccccc-cccccC--------CCceEEecCCCHHHHhhhcCE--
Confidence 578999999999966 88899999999999999999887621 111233 499999999999999999999
Q ss_pred EEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 045998 299 FLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAV 378 (408)
Q Consensus 299 fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~ 378 (408)
||||||+|||+||+++|||+|++|...||+.||.++++ .|+|+.+.. ..++.+.++++|+++|.+ ++|+++++
T Consensus 304 vI~hGG~gtt~eaL~~gvP~vv~P~~~DQ~~nA~rve~-~G~G~~l~~---~~l~~~~l~~av~~vL~~---~~~~~~~~ 376 (406)
T COG1819 304 VIHHGGAGTTSEALYAGVPLVVIPDGADQPLNAERVEE-LGAGIALPF---EELTEERLRAAVNEVLAD---DSYRRAAE 376 (406)
T ss_pred EEecCCcchHHHHHHcCCCEEEecCCcchhHHHHHHHH-cCCceecCc---ccCCHHHHHHHHHHHhcC---HHHHHHHH
Confidence 99999999999999999999999999999999999999 999999987 799999999999999999 89999999
Q ss_pred HHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 379 AWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 379 ~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
++++.+++.. | .+.+.+.|++..
T Consensus 377 ~~~~~~~~~~---g--~~~~a~~le~~~ 399 (406)
T COG1819 377 RLAEEFKEED---G--PAKAADLLEEFA 399 (406)
T ss_pred HHHHHhhhcc---c--HHHHHHHHHHHH
Confidence 9999998742 2 455566666543
No 28
>PF13528 Glyco_trans_1_3: Glycosyl transferase family 1
Probab=99.70 E-value=2.3e-16 Score=151.91 Aligned_cols=122 Identities=16% Similarity=0.261 Sum_probs=99.6
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCC-CCEEEEEecCCcccccccchhhhhhcCCCeEEEecc--cHHHHhcccC
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTK-RPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC--SQEKVLMHAA 295 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~--pq~~lL~h~~ 295 (408)
+++.|+|+||..... .++++++..+ .+|++. +..... ...+|+.+.++. ...++|+.++
T Consensus 191 ~~~~iLv~~gg~~~~------~~~~~l~~~~~~~~~v~-g~~~~~-----------~~~~ni~~~~~~~~~~~~~m~~ad 252 (318)
T PF13528_consen 191 DEPKILVYFGGGGPG------DLIEALKALPDYQFIVF-GPNAAD-----------PRPGNIHVRPFSTPDFAELMAAAD 252 (318)
T ss_pred CCCEEEEEeCCCcHH------HHHHHHHhCCCCeEEEE-cCCccc-----------ccCCCEEEeecChHHHHHHHHhCC
Confidence 345799999987643 6667777766 566655 543211 114899999876 4557999999
Q ss_pred cceEEeccCcchHHHHHHcCCceeeccC--CCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHH
Q 045998 296 VSCFLTHCGWNSTLETVAAGVPVIAYPE--WTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 296 v~~fitHgG~~s~~eal~~GvP~i~~P~--~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~v 364 (408)
+ +|||||+||++|++++|+|+|++|. +.||..||+++++ +|+|+.+.. ..++.+.|+++|+++
T Consensus 253 ~--vIs~~G~~t~~Ea~~~g~P~l~ip~~~~~EQ~~~a~~l~~-~G~~~~~~~---~~~~~~~l~~~l~~~ 317 (318)
T PF13528_consen 253 L--VISKGGYTTISEALALGKPALVIPRPGQDEQEYNARKLEE-LGLGIVLSQ---EDLTPERLAEFLERL 317 (318)
T ss_pred E--EEECCCHHHHHHHHHcCCCEEEEeCCCCchHHHHHHHHHH-CCCeEEccc---ccCCHHHHHHHHhcC
Confidence 9 9999999999999999999999999 7899999999999 999999986 789999999998764
No 29
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=99.68 E-value=9.1e-15 Score=142.57 Aligned_cols=146 Identities=13% Similarity=0.159 Sum_probs=110.9
Q ss_pred CCCceEEEecCCcccCCH-HHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecc-c-HHHHhccc
Q 045998 218 PPSSVIYISFGSLLVLSQ-NQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC-S-QEKVLMHA 294 (408)
Q Consensus 218 ~~~~vvyvs~GS~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~-p-q~~lL~h~ 294 (408)
+++++|+|..||+....- +.+.+++..+.. +.+++|++|.++.. +.. .+. .+..+.+|+ + -.++++++
T Consensus 183 ~~~~~iLv~GGS~Ga~~in~~~~~~l~~l~~-~~~vv~~~G~~~~~------~~~-~~~-~~~~~~~f~~~~m~~~~~~a 253 (352)
T PRK12446 183 RKKPVITIMGGSLGAKKINETVREALPELLL-KYQIVHLCGKGNLD------DSL-QNK-EGYRQFEYVHGELPDILAIT 253 (352)
T ss_pred CCCcEEEEECCccchHHHHHHHHHHHHhhcc-CcEEEEEeCCchHH------HHH-hhc-CCcEEecchhhhHHHHHHhC
Confidence 456799999999985443 334444444432 48899999875322 111 111 355566777 4 44799999
Q ss_pred CcceEEeccCcchHHHHHHcCCceeeccCC-----CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCc
Q 045998 295 AVSCFLTHCGWNSTLETVAAGVPVIAYPEW-----TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLN 369 (408)
Q Consensus 295 ~v~~fitHgG~~s~~eal~~GvP~i~~P~~-----~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~ 369 (408)
++ +|||||.+|+.|++++|+|+|.+|+. .+|..||+++++ .|+|..+.. ..++.+.|.+++.+++.|.
T Consensus 254 dl--vIsr~G~~t~~E~~~~g~P~I~iP~~~~~~~~~Q~~Na~~l~~-~g~~~~l~~---~~~~~~~l~~~l~~ll~~~- 326 (352)
T PRK12446 254 DF--VISRAGSNAIFEFLTLQKPMLLIPLSKFASRGDQILNAESFER-QGYASVLYE---EDVTVNSLIKHVEELSHNN- 326 (352)
T ss_pred CE--EEECCChhHHHHHHHcCCCEEEEcCCCCCCCchHHHHHHHHHH-CCCEEEcch---hcCCHHHHHHHHHHHHcCH-
Confidence 99 99999999999999999999999985 489999999998 999999986 7889999999999999872
Q ss_pred HHHHHHHHHHH
Q 045998 370 ATQMKKRAVAW 380 (408)
Q Consensus 370 ~~~~~~~a~~l 380 (408)
+.|+++++++
T Consensus 327 -~~~~~~~~~~ 336 (352)
T PRK12446 327 -EKYKTALKKY 336 (352)
T ss_pred -HHHHHHHHHc
Confidence 4566655443
No 30
>TIGR00661 MJ1255 conserved hypothetical protein. This model represents nearly the full length of MJ1255 from Methanococcus jannaschii and of an unpublished protein from Vibrio cholerae, as well as the C-terminal half of a protein from Methanobacterium thermoautotrophicum. A small region (~50 amino acids) within the domain appears related to a family of sugar transferases.
Probab=99.59 E-value=2.1e-14 Score=138.52 Aligned_cols=123 Identities=19% Similarity=0.249 Sum_probs=90.4
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEeccc--HHHHhcccCcc
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCS--QEKVLMHAAVS 297 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~p--q~~lL~h~~v~ 297 (408)
++.|+|.+|+... +.++++|.+.+. +.++++..+.. .+ ..++|+.+.+|.| ..+.|+.+++
T Consensus 188 ~~~iLv~~g~~~~------~~l~~~l~~~~~-~~~i~~~~~~~-----~~----~~~~~v~~~~~~~~~~~~~l~~ad~- 250 (321)
T TIGR00661 188 EDYILVYIGFEYR------YKILELLGKIAN-VKFVCYSYEVA-----KN----SYNENVEIRRITTDNFKELIKNAEL- 250 (321)
T ss_pred CCcEEEECCcCCH------HHHHHHHHhCCC-eEEEEeCCCCC-----cc----ccCCCEEEEECChHHHHHHHHhCCE-
Confidence 4568888888542 345677777653 33333322111 11 2348999999997 4477888888
Q ss_pred eEEeccCcchHHHHHHcCCceeeccCCC--ChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 298 CFLTHCGWNSTLETVAAGVPVIAYPEWT--DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 298 ~fitHgG~~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+|||||++|++|++++|+|++.+|..+ ||..||+.+++ .|+|+.+.. ..+ ++.+++.+++++
T Consensus 251 -vI~~~G~~t~~Ea~~~g~P~l~ip~~~~~eQ~~na~~l~~-~g~~~~l~~---~~~---~~~~~~~~~~~~ 314 (321)
T TIGR00661 251 -VITHGGFSLISEALSLGKPLIVIPDLGQFEQGNNAVKLED-LGCGIALEY---KEL---RLLEAILDIRNM 314 (321)
T ss_pred -EEECCChHHHHHHHHcCCCEEEEcCCCcccHHHHHHHHHH-CCCEEEcCh---hhH---HHHHHHHhcccc
Confidence 999999999999999999999999965 89999999998 999999976 444 555566666665
No 31
>COG0707 MurG UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase [Cell envelope biogenesis, outer membrane]
Probab=99.53 E-value=6.2e-12 Score=121.88 Aligned_cols=135 Identities=18% Similarity=0.168 Sum_probs=105.9
Q ss_pred CCceEEEecCCcccCCH-HHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcC-CC-eEEEecccHH-HHhccc
Q 045998 219 PSSVIYISFGSLLVLSQ-NQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETK-DR-GLVVKWCSQE-KVLMHA 294 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~-~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~-~n-~~v~~w~pq~-~lL~h~ 294 (408)
++++|+|.-||+....- +.+.++...+.+ +..+++.+|.+... ....... .+ ..+.+|..+. .+++.+
T Consensus 182 ~~~~ilV~GGS~Ga~~ln~~v~~~~~~l~~-~~~v~~~~G~~~~~-------~~~~~~~~~~~~~v~~f~~dm~~~~~~A 253 (357)
T COG0707 182 DKKTILVTGGSQGAKALNDLVPEALAKLAN-RIQVIHQTGKNDLE-------ELKSAYNELGVVRVLPFIDDMAALLAAA 253 (357)
T ss_pred CCcEEEEECCcchhHHHHHHHHHHHHHhhh-CeEEEEEcCcchHH-------HHHHHHhhcCcEEEeeHHhhHHHHHHhc
Confidence 56799999999985332 334444445544 57888888876422 2221211 22 6777888765 799999
Q ss_pred CcceEEeccCcchHHHHHHcCCceeeccCC----CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 295 AVSCFLTHCGWNSTLETVAAGVPVIAYPEW----TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 295 ~v~~fitHgG~~s~~eal~~GvP~i~~P~~----~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++ +||+.|.+|+.|.+++|+|+|.+|.- .+|..||+.+++ .|.|+.++. ..++.+.+.+.|.+++.+
T Consensus 254 DL--vIsRaGa~Ti~E~~a~g~P~IliP~p~~~~~~Q~~NA~~l~~-~gaa~~i~~---~~lt~~~l~~~i~~l~~~ 324 (357)
T COG0707 254 DL--VISRAGALTIAELLALGVPAILVPYPPGADGHQEYNAKFLEK-AGAALVIRQ---SELTPEKLAELILRLLSN 324 (357)
T ss_pred cE--EEeCCcccHHHHHHHhCCCEEEeCCCCCccchHHHHHHHHHh-CCCEEEecc---ccCCHHHHHHHHHHHhcC
Confidence 99 99999999999999999999999973 389999999999 999999987 789999999999999986
No 32
>PF04101 Glyco_tran_28_C: Glycosyltransferase family 28 C-terminal domain; InterPro: IPR007235 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC). Structural analysis suggests the C-terminal domain contains the UDP-GlcNAc binding site.; GO: 0016758 transferase activity, transferring hexosyl groups, 0030246 carbohydrate binding, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2KS6_A 2JZC_A 1NLM_B 1F0K_B.
Probab=99.48 E-value=3.5e-15 Score=130.11 Aligned_cols=136 Identities=18% Similarity=0.204 Sum_probs=99.7
Q ss_pred eEEEecCCcccCCH-HHHHHHHHHHHh--CCCCEEEEEecCCcccccccchhhhhhcCCCeEEEeccc-HHHHhcccCcc
Q 045998 222 VIYISFGSLLVLSQ-NQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCS-QEKVLMHAAVS 297 (408)
Q Consensus 222 vvyvs~GS~~~~~~-~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~p-q~~lL~h~~v~ 297 (408)
+|+|+.||.....- +.+..+...+.. ...+|++++|..... .....+ ...+.|+.+.+|.+ ...+++.+++
T Consensus 1 tilv~gGs~g~~~l~~~v~~~~~~~~~~~~~~~viv~~G~~~~~---~~~~~~-~~~~~~v~~~~~~~~m~~~m~~aDl- 75 (167)
T PF04101_consen 1 TILVTGGSQGARDLNRLVLKILELLAEKHKNIQVIVQTGKNNYE---ELKIKV-ENFNPNVKVFGFVDNMAELMAAADL- 75 (167)
T ss_dssp -EEEEETTTSHHHHHCCCCCHHHHHHHHHHHCCCCCCCTTCECH---HHCCCH-CCTTCCCEEECSSSSHHHHHHHHSE-
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHhhcCCCcEEEEEECCCcHH---HHHHHH-hccCCcEEEEechhhHHHHHHHcCE-
Confidence 48999998773211 112233333333 257899999876433 222111 12236899999999 7799999999
Q ss_pred eEEeccCcchHHHHHHcCCceeeccCCC----ChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 298 CFLTHCGWNSTLETVAAGVPVIAYPEWT----DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 298 ~fitHgG~~s~~eal~~GvP~i~~P~~~----DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+|||||.+|++|++++|+|+|++|... +|..||..+++ .|+|+.+.. ...+.+.|.++|++++.+
T Consensus 76 -vIs~aG~~Ti~E~l~~g~P~I~ip~~~~~~~~q~~na~~~~~-~g~~~~~~~---~~~~~~~L~~~i~~l~~~ 144 (167)
T PF04101_consen 76 -VISHAGAGTIAEALALGKPAIVIPLPGAADNHQEENAKELAK-KGAAIMLDE---SELNPEELAEAIEELLSD 144 (167)
T ss_dssp -EEECS-CHHHHHHHHCT--EEEE--TTT-T-CHHHHHHHHHH-CCCCCCSEC---CC-SCCCHHHHHHCHCCC
T ss_pred -EEeCCCccHHHHHHHcCCCeeccCCCCcchHHHHHHHHHHHH-cCCccccCc---ccCCHHHHHHHHHHHHcC
Confidence 999999999999999999999999988 99999999998 999999986 677799999999999987
No 33
>PRK00726 murG undecaprenyldiphospho-muramoylpentapeptide beta-N- acetylglucosaminyltransferase; Provisional
Probab=99.46 E-value=1.3e-11 Score=120.72 Aligned_cols=169 Identities=17% Similarity=0.191 Sum_probs=113.5
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCC--CEEEEEecCCcccccccchhhhhhcCCCeEEEeccc-HHHHhcccC
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKR--PFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCS-QEKVLMHAA 295 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~--~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~p-q~~lL~h~~ 295 (408)
+..+|++..|+... ......+.+++.+... .++|.+|..... .+-+.. + .+-++.+.+|+. ..++++.++
T Consensus 182 ~~~~i~~~gg~~~~--~~~~~~l~~a~~~~~~~~~~~~~~G~g~~~---~~~~~~-~-~~~~v~~~g~~~~~~~~~~~~d 254 (357)
T PRK00726 182 GKPTLLVVGGSQGA--RVLNEAVPEALALLPEALQVIHQTGKGDLE---EVRAAY-A-AGINAEVVPFIDDMAAAYAAAD 254 (357)
T ss_pred CCeEEEEECCcHhH--HHHHHHHHHHHHHhhhCcEEEEEcCCCcHH---HHHHHh-h-cCCcEEEeehHhhHHHHHHhCC
Confidence 34567766555431 1222223355554332 456667765432 221111 1 223477789984 458999999
Q ss_pred cceEEeccCcchHHHHHHcCCceeeccC----CCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHH
Q 045998 296 VSCFLTHCGWNSTLETVAAGVPVIAYPE----WTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNAT 371 (408)
Q Consensus 296 v~~fitHgG~~s~~eal~~GvP~i~~P~----~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~ 371 (408)
+ +|+|+|.++++||+++|+|+|++|. .++|..|+..+.+ .|.|+.+.. .+++.++|.+++.+++++ +
T Consensus 255 ~--~i~~~g~~~~~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~~i~~-~~~g~~~~~---~~~~~~~l~~~i~~ll~~---~ 325 (357)
T PRK00726 255 L--VICRAGASTVAELAAAGLPAILVPLPHAADDHQTANARALVD-AGAALLIPQ---SDLTPEKLAEKLLELLSD---P 325 (357)
T ss_pred E--EEECCCHHHHHHHHHhCCCEEEecCCCCCcCcHHHHHHHHHH-CCCEEEEEc---ccCCHHHHHHHHHHHHcC---H
Confidence 9 9999999999999999999999997 4689999999998 899999976 667899999999999998 6
Q ss_pred HHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhC
Q 045998 372 QMKKRAVAWKEAAKKALEDGGSSDANINRFINEITRK 408 (408)
Q Consensus 372 ~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 408 (408)
.+++++.+-+. +. .+..+. ..+.+.+.++.||
T Consensus 326 ~~~~~~~~~~~---~~-~~~~~~-~~~~~~~~~~~~~ 357 (357)
T PRK00726 326 ERLEAMAEAAR---AL-GKPDAA-ERLADLIEELARK 357 (357)
T ss_pred HHHHHHHHHHH---hc-CCcCHH-HHHHHHHHHHhhC
Confidence 66655544433 32 233433 4455555555554
No 34
>cd03785 GT1_MurG MurG is an N-acetylglucosaminyltransferase, the last enzyme involved in the intracellular phase of peptidoglycan biosynthesis. It transfers N-acetyl-D-glucosamine (GlcNAc) from UDP-GlcNAc to the C4 hydroxyl of a lipid-linked N-acetylmuramoyl pentapeptide (NAM). The resulting disaccharide is then transported across the cell membrane, where it is polymerized into NAG-NAM cell-wall repeat structure. MurG belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains, each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=99.36 E-value=1.1e-10 Score=113.70 Aligned_cols=139 Identities=15% Similarity=0.167 Sum_probs=100.0
Q ss_pred CCceEEEecCCcccCC-HHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecc-cHHHHhcccCc
Q 045998 219 PSSVIYISFGSLLVLS-QNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC-SQEKVLMHAAV 296 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~-~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~-pq~~lL~h~~v 296 (408)
++.+|++..|+..... .+.+...+..+.+.+..+++.+|..... .+.+... ...+|+.+.+|. ....+|+.+++
T Consensus 180 ~~~~i~~~~g~~~~~~~~~~l~~a~~~l~~~~~~~~~i~G~g~~~---~l~~~~~-~~~~~v~~~g~~~~~~~~l~~ad~ 255 (350)
T cd03785 180 GKPTLLVFGGSQGARAINEAVPEALAELLRKRLQVIHQTGKGDLE---EVKKAYE-ELGVNYEVFPFIDDMAAAYAAADL 255 (350)
T ss_pred CCeEEEEECCcHhHHHHHHHHHHHHHHhhccCeEEEEEcCCccHH---HHHHHHh-ccCCCeEEeehhhhHHHHHHhcCE
Confidence 4456667666654221 1223344444543445567777765322 2322221 224789999998 55589999999
Q ss_pred ceEEeccCcchHHHHHHcCCceeeccC----CCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 297 SCFLTHCGWNSTLETVAAGVPVIAYPE----WTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 297 ~~fitHgG~~s~~eal~~GvP~i~~P~----~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+|+|+|.++++||+++|+|+|+.|. ..+|..|+..+.+ .|.|+.+.. ...+.+++.+++++++.+
T Consensus 256 --~v~~sg~~t~~Eam~~G~Pvv~~~~~~~~~~~~~~~~~~l~~-~g~g~~v~~---~~~~~~~l~~~i~~ll~~ 324 (350)
T cd03785 256 --VISRAGASTVAELAALGLPAILIPLPYAADDHQTANARALVK-AGAAVLIPQ---EELTPERLAAALLELLSD 324 (350)
T ss_pred --EEECCCHhHHHHHHHhCCCEEEeecCCCCCCcHHHhHHHHHh-CCCEEEEec---CCCCHHHHHHHHHHHhcC
Confidence 9999999999999999999999986 4578899999998 899999975 456899999999999987
No 35
>PRK13609 diacylglycerol glucosyltransferase; Provisional
Probab=99.21 E-value=6.4e-09 Score=102.71 Aligned_cols=164 Identities=20% Similarity=0.197 Sum_probs=108.6
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhC-CCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH-HHhcccCc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINT-KRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE-KVLMHAAV 296 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~-~lL~h~~v 296 (408)
++++|++.-|+.... ..+..+++++.+. +.+++++.+.+... ...+ +...+..++|+.+.+|+++. ++++.+++
T Consensus 201 ~~~~il~~~G~~~~~--k~~~~li~~l~~~~~~~~viv~G~~~~~-~~~l-~~~~~~~~~~v~~~g~~~~~~~l~~~aD~ 276 (380)
T PRK13609 201 NKKILLIMAGAHGVL--GNVKELCQSLMSVPDLQVVVVCGKNEAL-KQSL-EDLQETNPDALKVFGYVENIDELFRVTSC 276 (380)
T ss_pred CCcEEEEEcCCCCCC--cCHHHHHHHHhhCCCcEEEEEeCCCHHH-HHHH-HHHHhcCCCcEEEEechhhHHHHHHhccE
Confidence 446777777876532 2345666677653 56777776643210 0011 11112234689999999875 79999998
Q ss_pred ceEEeccCcchHHHHHHcCCceeec-cCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHH
Q 045998 297 SCFLTHCGWNSTLETVAAGVPVIAY-PEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKK 375 (408)
Q Consensus 297 ~~fitHgG~~s~~eal~~GvP~i~~-P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~ 375 (408)
+|+..|..++.||+++|+|+|+. |..+.+..|+..+.+ .|+|+... +.+++.++|.+++.+ ++.++
T Consensus 277 --~v~~~gg~t~~EA~a~g~PvI~~~~~~g~~~~n~~~~~~-~G~~~~~~-------~~~~l~~~i~~ll~~---~~~~~ 343 (380)
T PRK13609 277 --MITKPGGITLSEAAALGVPVILYKPVPGQEKENAMYFER-KGAAVVIR-------DDEEVFAKTEALLQD---DMKLL 343 (380)
T ss_pred --EEeCCCchHHHHHHHhCCCEEECCCCCCcchHHHHHHHh-CCcEEEEC-------CHHHHHHHHHHHHCC---HHHHH
Confidence 99999988999999999999994 677778889998887 89987653 568999999999987 44443
Q ss_pred HHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 045998 376 RAVAWKEAAKKALEDGGSSDANINRFIN 403 (408)
Q Consensus 376 ~a~~l~~~~~~a~~~gg~s~~~~~~~v~ 403 (408)
+ +++..++. ....+.++-.+.+++
T Consensus 344 ~---m~~~~~~~-~~~~s~~~i~~~i~~ 367 (380)
T PRK13609 344 Q---MKEAMKSL-YLPEPADHIVDDILA 367 (380)
T ss_pred H---HHHHHHHh-CCCchHHHHHHHHHH
Confidence 3 33333332 333444444444443
No 36
>PRK13608 diacylglycerol glucosyltransferase; Provisional
Probab=99.21 E-value=2.9e-09 Score=105.65 Aligned_cols=132 Identities=14% Similarity=0.250 Sum_probs=96.2
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHh--CCCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccHH-HHhcc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQE-KVLMH 293 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq~-~lL~h 293 (408)
++++|+++.|+... ...+..+++++.+ .+.+++++.|.+.. +-+.+.+. ..+++.+.+|+.+. ++++.
T Consensus 201 ~~~~ilv~~G~lg~--~k~~~~li~~~~~~~~~~~~vvv~G~~~~-----l~~~l~~~~~~~~~v~~~G~~~~~~~~~~~ 273 (391)
T PRK13608 201 DKQTILMSAGAFGV--SKGFDTMITDILAKSANAQVVMICGKSKE-----LKRSLTAKFKSNENVLILGYTKHMNEWMAS 273 (391)
T ss_pred CCCEEEEECCCccc--chhHHHHHHHHHhcCCCceEEEEcCCCHH-----HHHHHHHHhccCCCeEEEeccchHHHHHHh
Confidence 45688888888762 1234444445433 34567777665421 11222221 23578888999765 68999
Q ss_pred cCcceEEeccCcchHHHHHHcCCceeec-cCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 294 AAVSCFLTHCGWNSTLETVAAGVPVIAY-PEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 294 ~~v~~fitHgG~~s~~eal~~GvP~i~~-P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+++ ||+..|..|+.||+++|+|+|+. |..+.|..|+..+.+ .|+|+.+. +.+++.++|.+++++
T Consensus 274 aDl--~I~k~gg~tl~EA~a~G~PvI~~~~~pgqe~~N~~~~~~-~G~g~~~~-------~~~~l~~~i~~ll~~ 338 (391)
T PRK13608 274 SQL--MITKPGGITISEGLARCIPMIFLNPAPGQELENALYFEE-KGFGKIAD-------TPEEAIKIVASLTNG 338 (391)
T ss_pred hhE--EEeCCchHHHHHHHHhCCCEEECCCCCCcchhHHHHHHh-CCcEEEeC-------CHHHHHHHHHHHhcC
Confidence 999 99988888999999999999998 776777889999998 99998753 678899999999987
No 37
>PLN02605 monogalactosyldiacylglycerol synthase
Probab=99.17 E-value=2.8e-08 Score=98.30 Aligned_cols=166 Identities=13% Similarity=0.088 Sum_probs=105.2
Q ss_pred CCCceEEEecCCcccCCH-HHHHHHHHHHH-----hCCCCEEEEEecCCcccccccchhhhhh-cCCCeEEEecccHH-H
Q 045998 218 PPSSVIYISFGSLLVLSQ-NQIDSIAAALI-----NTKRPFLWVIRSQENKEGGVLRAGFLEE-TKDRGLVVKWCSQE-K 289 (408)
Q Consensus 218 ~~~~vvyvs~GS~~~~~~-~~~~~~~~al~-----~~~~~~iw~~~~~~~~~~~~lp~~~~~~-~~~n~~v~~w~pq~-~ 289 (408)
+++++|.+..|+...... +.++.+...+. ..+.++++++|.+.. +-+.+.+. ...++.+.+|+++. +
T Consensus 204 ~~~~~il~~Gg~~g~~~~~~li~~l~~~~~~~~~~~~~~~~~vi~G~~~~-----~~~~L~~~~~~~~v~~~G~~~~~~~ 278 (382)
T PLN02605 204 EDLPAVLLMGGGEGMGPLEETARALGDSLYDKNLGKPIGQVVVICGRNKK-----LQSKLESRDWKIPVKVRGFVTNMEE 278 (382)
T ss_pred CCCcEEEEECCCcccccHHHHHHHHHHhhccccccCCCceEEEEECCCHH-----HHHHHHhhcccCCeEEEeccccHHH
Confidence 345677776666553222 22333332221 233566777775421 11122111 13568888998865 7
Q ss_pred HhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChh-hhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 290 VLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQP-TDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 290 lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~-~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
+++.+++ +|+.+|-++++||+++|+|+|+.+....|. .|+..+.+ .|.|+.+. +.+++.++|.+++.+.
T Consensus 279 l~~aaDv--~V~~~g~~ti~EAma~g~PvI~~~~~pgqe~gn~~~i~~-~g~g~~~~-------~~~~la~~i~~ll~~~ 348 (382)
T PLN02605 279 WMGACDC--IITKAGPGTIAEALIRGLPIILNGYIPGQEEGNVPYVVD-NGFGAFSE-------SPKEIARIVAEWFGDK 348 (382)
T ss_pred HHHhCCE--EEECCCcchHHHHHHcCCCEEEecCCCccchhhHHHHHh-CCceeecC-------CHHHHHHHHHHHHcCC
Confidence 9999999 999999999999999999999998766675 69999997 89997652 6799999999999762
Q ss_pred cHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 045998 369 NATQMKKRAVAWKEAAKKALEDGGSSDANINRFINE 404 (408)
Q Consensus 369 ~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~ 404 (408)
+ +..++|++..++. ....++.+-.+.+.+.
T Consensus 349 --~---~~~~~m~~~~~~~-~~~~a~~~i~~~l~~~ 378 (382)
T PLN02605 349 --S---DELEAMSENALKL-ARPEAVFDIVHDLHEL 378 (382)
T ss_pred --H---HHHHHHHHHHHHh-cCCchHHHHHHHHHHH
Confidence 2 2333444444443 2334444444444433
No 38
>TIGR00215 lpxB lipid-A-disaccharide synthase. Lipid-A precursor biosynthesis producing lipid A disaccharide in a condensation reaction. transcribed as part of an operon including lpxA
Probab=99.06 E-value=1.3e-08 Score=100.57 Aligned_cols=171 Identities=9% Similarity=0.007 Sum_probs=113.9
Q ss_pred CCCceEEEecCCcccCCHHHHHHHHHHHHh---C--CCCEEEEEecCCcccccccchhhhhhc--CCCeEEEecccHHHH
Q 045998 218 PPSSVIYISFGSLLVLSQNQIDSIAAALIN---T--KRPFLWVIRSQENKEGGVLRAGFLEET--KDRGLVVKWCSQEKV 290 (408)
Q Consensus 218 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~~---~--~~~~iw~~~~~~~~~~~~lp~~~~~~~--~~n~~v~~w~pq~~l 290 (408)
+++++|.+--||...--......+++++.. . +.++++......... .+ +.+.+.. ..++.+..+ ....+
T Consensus 189 ~~~~~Ilvl~GSR~aei~k~~~~ll~a~~~l~~~~p~~~~vi~~~~~~~~~--~~-~~~~~~~~~~~~v~~~~~-~~~~~ 264 (385)
T TIGR00215 189 HNGETLALLPGSRGSEVEKLFPLFLKAAQLLEQQEPDLRRVLPVVNFKRRL--QF-EQIKAEYGPDLQLHLIDG-DARKA 264 (385)
T ss_pred CCCCEEEEECCCCHHHHHHhHHHHHHHHHHHHHhCCCeEEEEEeCCchhHH--HH-HHHHHHhCCCCcEEEECc-hHHHH
Confidence 345688888888764212334445544433 2 334555443321110 11 1122222 123333332 34568
Q ss_pred hcccCcceEEeccCcchHHHHHHcCCceeec----cCCC---------ChhhhHHhhhceeeeEEEeecCCCCCcCHHHH
Q 045998 291 LMHAAVSCFLTHCGWNSTLETVAAGVPVIAY----PEWT---------DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQV 357 (408)
Q Consensus 291 L~h~~v~~fitHgG~~s~~eal~~GvP~i~~----P~~~---------DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l 357 (408)
++.+++ +|+-+|..|+ |++++|+|+|++ |+.. .|..|+..+.. .++...+.. +..+.+.|
T Consensus 265 l~aADl--~V~~SGt~tl-Ea~a~G~P~Vv~yk~~pl~~~~~~~~~~~~~~~~~nil~~-~~~~pel~q---~~~~~~~l 337 (385)
T TIGR00215 265 MFAADA--ALLASGTAAL-EAALIKTPMVVGYRMKPLTFLIARRLVKTDYISLPNILAN-RLLVPELLQ---EECTPHPL 337 (385)
T ss_pred HHhCCE--EeecCCHHHH-HHHHcCCCEEEEEcCCHHHHHHHHHHHcCCeeeccHHhcC-CccchhhcC---CCCCHHHH
Confidence 999999 9999999887 999999999999 8742 37789999998 898888875 78999999
Q ss_pred HHHHHHHhcCCcHH----HHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 045998 358 QRCIDEATQGLNAT----QMKKRAVAWKEAAKKALEDGGSSDANINRFI 402 (408)
Q Consensus 358 ~~~i~~vl~~~~~~----~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v 402 (408)
.+.+.+++.| + +++++.++--..+++.++++|.|.+.-+..+
T Consensus 338 ~~~~~~ll~~---~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~a~~i~ 383 (385)
T TIGR00215 338 AIALLLLLEN---GLKAYKEMHRERQFFEELRQRIYCNADSERAAQAVL 383 (385)
T ss_pred HHHHHHHhcC---CcccHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHh
Confidence 9999999988 5 6777777766777777777788776655544
No 39
>TIGR03492 conserved hypothetical protein. This protein family is restricted to the Cyanobacteria, in one or two copies, save for instances in the genus Deinococcus. This protein shows some sequence similarity, especially toward the C-terminus, to lipid-A-disaccharide synthase (TIGR00215 or pfam02684). The function is unknown.
Probab=99.01 E-value=6.7e-08 Score=95.84 Aligned_cols=163 Identities=17% Similarity=0.080 Sum_probs=100.7
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHh----CCCCEEEEEecC-Ccccccccchhhhh-hc--------------CCCe
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAALIN----TKRPFLWVIRSQ-ENKEGGVLRAGFLE-ET--------------KDRG 279 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al~~----~~~~~iw~~~~~-~~~~~~~lp~~~~~-~~--------------~~n~ 279 (408)
.++|.+--||...--...+..+++++.. .+..|++.+... ... .+-+.+.+ .. .+++
T Consensus 205 ~~~lllLpGSR~ae~~~~lp~~l~al~~L~~~~~~~~v~~~~~~~~~~---~~~~~l~~~g~~~~~~~~~~~~~~~~~~~ 281 (396)
T TIGR03492 205 RFRIALLPGSRPPEAYRNLKLLLRALEALPDSQPFVFLAAIVPSLSLE---KLQAILEDLGWQLEGSSEDQTSLFQKGTL 281 (396)
T ss_pred CCEEEEECCCCHHHHHccHHHHHHHHHHHhhCCCeEEEEEeCCCCCHH---HHHHHHHhcCceecCCccccchhhccCce
Confidence 4578888899763222333445555444 356788887433 221 11111110 00 1234
Q ss_pred EEEecc-cHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhcee----eeEEEeecCCCCCcCH
Q 045998 280 LVVKWC-SQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVF----KIGVRMRNEEDGTLSI 354 (408)
Q Consensus 280 ~v~~w~-pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~----g~G~~l~~~~~~~~~~ 354 (408)
.+..+. .-.++++.+++ +|+-.|..| .|+...|+|+|.+|.-..|. |+...++ . |.++.+.. .+.
T Consensus 282 ~v~~~~~~~~~~l~~ADl--vI~rSGt~T-~E~a~lg~P~Ilip~~~~q~-na~~~~~-~~~l~g~~~~l~~-----~~~ 351 (396)
T TIGR03492 282 EVLLGRGAFAEILHWADL--GIAMAGTAT-EQAVGLGKPVIQLPGKGPQF-TYGFAEA-QSRLLGGSVFLAS-----KNP 351 (396)
T ss_pred EEEechHhHHHHHHhCCE--EEECcCHHH-HHHHHhCCCEEEEeCCCCHH-HHHHHHh-hHhhcCCEEecCC-----CCH
Confidence 555444 34579999999 999999766 99999999999999877776 9876665 3 66666642 344
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 045998 355 QQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRF 401 (408)
Q Consensus 355 ~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~ 401 (408)
+.|.+++.+++.| +..+++.. +..++.++.++++.+-.+.+
T Consensus 352 ~~l~~~l~~ll~d---~~~~~~~~---~~~~~~lg~~~a~~~ia~~i 392 (396)
T TIGR03492 352 EQAAQVVRQLLAD---PELLERCR---RNGQERMGPPGASARIAESI 392 (396)
T ss_pred HHHHHHHHHHHcC---HHHHHHHH---HHHHHhcCCCCHHHHHHHHH
Confidence 9999999999987 55444433 23333345556665444433
No 40
>PRK00025 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=98.80 E-value=1.5e-06 Score=85.83 Aligned_cols=172 Identities=11% Similarity=0.073 Sum_probs=93.6
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEecCCcccccccchhhhhhc-CCCeEEEecccHHHHhc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALIN-----TKRPFLWVIRSQENKEGGVLRAGFLEET-KDRGLVVKWCSQEKVLM 292 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~-----~~~~~iw~~~~~~~~~~~~lp~~~~~~~-~~n~~v~~w~pq~~lL~ 292 (408)
++++|.+..||...........++++++. .+.+++|+.+...... .+- ...+.. +-++.+.. -.-..+++
T Consensus 185 ~~~~il~~~gsr~~~~~~~~~~l~~a~~~l~~~~~~~~~ii~~~~~~~~~--~~~-~~~~~~~~~~v~~~~-~~~~~~~~ 260 (380)
T PRK00025 185 DARVLALLPGSRGQEIKRLLPPFLKAAQLLQQRYPDLRFVLPLVNPKRRE--QIE-EALAEYAGLEVTLLD-GQKREAMA 260 (380)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCChhhHH--HHH-HHHhhcCCCCeEEEc-ccHHHHHH
Confidence 34566666676543211223444444432 2346777655222110 111 111111 22343332 12357899
Q ss_pred ccCcceEEeccCcchHHHHHHcCCceeeccCCCChh--------hh-----HHhhhceeeeEEEeecCCCCCcCHHHHHH
Q 045998 293 HAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQP--------TD-----AKLLVDVFKIGVRMRNEEDGTLSIQQVQR 359 (408)
Q Consensus 293 h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~--------~n-----a~~v~~~~g~G~~l~~~~~~~~~~~~l~~ 359 (408)
.+++ +|+.+|.+++ |++++|+|+|+.|-..-.. .| +..+.+ .+++..+.. ...+.+++.+
T Consensus 261 ~aDl--~v~~sG~~~l-Ea~a~G~PvI~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~---~~~~~~~l~~ 333 (380)
T PRK00025 261 AADA--ALAASGTVTL-ELALLKVPMVVGYKVSPLTFWIAKRLVKVPYVSLPNLLAG-RELVPELLQ---EEATPEKLAR 333 (380)
T ss_pred hCCE--EEECccHHHH-HHHHhCCCEEEEEccCHHHHHHHHHHHcCCeeehHHHhcC-CCcchhhcC---CCCCHHHHHH
Confidence 9999 9999998777 9999999999996542111 11 122222 222333332 5678999999
Q ss_pred HHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 045998 360 CIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEI 405 (408)
Q Consensus 360 ~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 405 (408)
++.++++| ++.+++..+-.+.+++.. ..|++.+..+.+.+.+
T Consensus 334 ~i~~ll~~---~~~~~~~~~~~~~~~~~~-~~~a~~~~~~~i~~~~ 375 (380)
T PRK00025 334 ALLPLLAD---GARRQALLEGFTELHQQL-RCGADERAAQAVLELL 375 (380)
T ss_pred HHHHHhcC---HHHHHHHHHHHHHHHHHh-CCCHHHHHHHHHHHHh
Confidence 99999998 555555444444444444 4455555555444433
No 41
>TIGR01133 murG undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase. RL J Bacteriol 1993 Mar;175(6):1841-3
Probab=98.78 E-value=8.6e-08 Score=93.23 Aligned_cols=81 Identities=23% Similarity=0.278 Sum_probs=69.4
Q ss_pred cHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCC---CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHH
Q 045998 286 SQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEW---TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCID 362 (408)
Q Consensus 286 pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~---~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~ 362 (408)
.-..+|+.+++ +|+++|.++++||+++|+|+|+.|.. .+|..|+..+.+ .+.|..+.. +..+.++|.++++
T Consensus 243 ~~~~~l~~ad~--~v~~~g~~~l~Ea~~~g~Pvv~~~~~~~~~~~~~~~~~i~~-~~~G~~~~~---~~~~~~~l~~~i~ 316 (348)
T TIGR01133 243 NMAAAYAAADL--VISRAGASTVAELAAAGVPAILIPYPYAADDQYYNAKFLED-LGAGLVIRQ---KELLPEKLLEALL 316 (348)
T ss_pred CHHHHHHhCCE--EEECCChhHHHHHHHcCCCEEEeeCCCCccchhhHHHHHHH-CCCEEEEec---ccCCHHHHHHHHH
Confidence 45689999999 99999988999999999999999873 467889999998 899998875 5668999999999
Q ss_pred HHhcCCcHHHHHH
Q 045998 363 EATQGLNATQMKK 375 (408)
Q Consensus 363 ~vl~~~~~~~~~~ 375 (408)
+++.+ +++++
T Consensus 317 ~ll~~---~~~~~ 326 (348)
T TIGR01133 317 KLLLD---PANLE 326 (348)
T ss_pred HHHcC---HHHHH
Confidence 99987 44443
No 42
>TIGR03590 PseG pseudaminic acid biosynthesis-associated protein PseG. This protein is found in association with enzymes involved in the biosynthesis of pseudaminic acid, a component of polysaccharide in certain Pseudomonas strains as well as a modification of flagellin in Campylobacter and Hellicobacter. The role of this protein is unclear, although it may participate in N-acetylation in conjunction with, or in the absence of PseH (TIGR03585) as it often scores above the trusted cutoff to pfam00583 representing a family of acetyltransferases.
Probab=98.64 E-value=1.7e-07 Score=88.52 Aligned_cols=103 Identities=15% Similarity=0.149 Sum_probs=78.2
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHh--CCCCEEEEEecCCcccccccchhhhh--hcCCCeEEEecccHH-HHhcccC
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAGFLE--ETKDRGLVVKWCSQE-KVLMHAA 295 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~~~~--~~~~n~~v~~w~pq~-~lL~h~~ 295 (408)
+.|+|+||..-.. .....++++|.+ .+.++.+++|..... .+.+.+ ....|+.+..++++. .+++.++
T Consensus 171 ~~iLi~~GG~d~~--~~~~~~l~~l~~~~~~~~i~vv~G~~~~~-----~~~l~~~~~~~~~i~~~~~~~~m~~lm~~aD 243 (279)
T TIGR03590 171 RRVLVSFGGADPD--NLTLKLLSALAESQINISITLVTGSSNPN-----LDELKKFAKEYPNIILFIDVENMAELMNEAD 243 (279)
T ss_pred CeEEEEeCCcCCc--CHHHHHHHHHhccccCceEEEEECCCCcC-----HHHHHHHHHhCCCEEEEeCHHHHHHHHHHCC
Confidence 4689999865532 244556667665 345788888875321 122222 124689999999886 8999999
Q ss_pred cceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHh
Q 045998 296 VSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKL 333 (408)
Q Consensus 296 v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~ 333 (408)
+ +||+|| +|++|+++.|+|+|++|...+|..||+.
T Consensus 244 l--~Is~~G-~T~~E~~a~g~P~i~i~~~~nQ~~~a~~ 278 (279)
T TIGR03590 244 L--AIGAAG-STSWERCCLGLPSLAICLAENQQSNSQQ 278 (279)
T ss_pred E--EEECCc-hHHHHHHHcCCCEEEEEecccHHHHhhh
Confidence 9 999999 9999999999999999999999999975
No 43
>cd03814 GT1_like_2 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=98.48 E-value=0.00014 Score=70.16 Aligned_cols=127 Identities=14% Similarity=0.142 Sum_probs=84.0
Q ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhC-CCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHH---HhcccC
Q 045998 221 SVIYISFGSLLV-LSQNQIDSIAAALINT-KRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEK---VLMHAA 295 (408)
Q Consensus 221 ~vvyvs~GS~~~-~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~---lL~h~~ 295 (408)
..+++..|+... -..+.+.+++..+.+. +.+++ .+|..... +.+. ....|+.+.+|+++.+ +++.++
T Consensus 197 ~~~i~~~G~~~~~k~~~~~i~~~~~l~~~~~~~l~-i~G~~~~~------~~~~-~~~~~v~~~g~~~~~~~~~~~~~~d 268 (364)
T cd03814 197 RPVLLYVGRLAPEKNLEALLDADLPLRRRPPVRLV-IVGDGPAR------ARLE-ARYPNVHFLGFLDGEELAAAYASAD 268 (364)
T ss_pred CeEEEEEeccccccCHHHHHHHHHHhhhcCCceEE-EEeCCchH------HHHh-ccCCcEEEEeccCHHHHHHHHHhCC
Confidence 456677777652 2234444444444432 34444 44443211 1111 2347899999999774 799999
Q ss_pred cceEEeccC----cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 296 VSCFLTHCG----WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 296 v~~fitHgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+ +|.++. .++++||+++|+|+|+.+..+ +...+.+ .+.|.... .-+.+++.+++.+++.+
T Consensus 269 ~--~l~~s~~e~~~~~~lEa~a~g~PvI~~~~~~----~~~~i~~-~~~g~~~~-----~~~~~~l~~~i~~l~~~ 332 (364)
T cd03814 269 V--FVFPSRTETFGLVVLEAMASGLPVVAPDAGG----PADIVTD-GENGLLVE-----PGDAEAFAAALAALLAD 332 (364)
T ss_pred E--EEECcccccCCcHHHHHHHcCCCEEEcCCCC----chhhhcC-CcceEEcC-----CCCHHHHHHHHHHHHcC
Confidence 9 776654 478999999999999987554 4555665 68888774 34678899999999987
No 44
>TIGR00236 wecB UDP-N-acetylglucosamine 2-epimerase. Epimerase activity was also demonstrated in a bifunctional rat enzyme, for which the N-terminal domain appears to be orthologous. The set of proteins found above the suggested cutoff includes E. coli WecB in one of two deeply branched clusters and the rat UDP-N-acetylglucosamine 2-epimerase domain in the other.
Probab=98.48 E-value=1.6e-05 Score=78.05 Aligned_cols=156 Identities=13% Similarity=0.188 Sum_probs=93.9
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhC-----CCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccH---HHH
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINT-----KRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQ---EKV 290 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~-----~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq---~~l 290 (408)
.+|+++++-.... ...+..+++++.+. +.++++..+.+.. .-..+.+. ..+|+.+.+.+++ ..+
T Consensus 198 ~~vl~~~hr~~~~-~k~~~~ll~a~~~l~~~~~~~~~vi~~~~~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 271 (365)
T TIGR00236 198 RYILLTLHRRENV-GEPLENIFKAIREIVEEFEDVQIVYPVHLNPV-----VREPLHKHLGDSKRVHLIEPLEYLDFLNL 271 (365)
T ss_pred CEEEEecCchhhh-hhHHHHHHHHHHHHHHHCCCCEEEEECCCChH-----HHHHHHHHhCCCCCEEEECCCChHHHHHH
Confidence 4666655432211 13366667766553 4566665443211 11112221 2367888876554 467
Q ss_pred hcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcH
Q 045998 291 LMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNA 370 (408)
Q Consensus 291 L~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~ 370 (408)
++++++ +|+-.|. .+.||+++|+|+|..+-.++++. +.+ .|.++.+. .+.++|.+++.+++.+
T Consensus 272 l~~ad~--vv~~Sg~-~~~EA~a~g~PvI~~~~~~~~~e----~~~-~g~~~lv~------~d~~~i~~ai~~ll~~--- 334 (365)
T TIGR00236 272 AANSHL--ILTDSGG-VQEEAPSLGKPVLVLRDTTERPE----TVE-AGTNKLVG------TDKENITKAAKRLLTD--- 334 (365)
T ss_pred HHhCCE--EEECChh-HHHHHHHcCCCEEECCCCCCChH----HHh-cCceEEeC------CCHHHHHHHHHHHHhC---
Confidence 788888 8987764 47999999999999876565543 233 46676553 2679999999999987
Q ss_pred HHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHH
Q 045998 371 TQMKKRAVAWKEAAKKALEDGGSSDANINRFIN 403 (408)
Q Consensus 371 ~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~ 403 (408)
+..+++..+-. ...++|+++.+-++.+.+
T Consensus 335 ~~~~~~~~~~~----~~~g~~~a~~ri~~~l~~ 363 (365)
T TIGR00236 335 PDEYKKMSNAS----NPYGDGEASERIVEELLN 363 (365)
T ss_pred hHHHHHhhhcC----CCCcCchHHHHHHHHHHh
Confidence 55555543322 122566777766655544
No 45
>cd03800 GT1_Sucrose_synthase This family is most closely related to the GT1 family of glycosyltransferases. The sucrose-phosphate synthases in this family may be unique to plants and photosynthetic bacteria. This enzyme catalyzes the synthesis of sucrose 6-phosphate from fructose 6-phosphate and uridine 5'-diphosphate-glucose, a key regulatory step of sucrose metabolism. The activity of this enzyme is regulated by phosphorylation and moderated by the concentration of various metabolites and light.
Probab=98.29 E-value=0.00085 Score=66.01 Aligned_cols=80 Identities=21% Similarity=0.209 Sum_probs=61.5
Q ss_pred CCCeEEEecccHHH---HhcccCcceEEecc---C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCC
Q 045998 276 KDRGLVVKWCSQEK---VLMHAAVSCFLTHC---G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEE 348 (408)
Q Consensus 276 ~~n~~v~~w~pq~~---lL~h~~v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 348 (408)
.+|+.+.+|+|+.+ ++..+++ ++... | -.+++||+++|+|+|+-...+ ....+.+ .+.|..++.
T Consensus 282 ~~~v~~~g~~~~~~~~~~~~~adi--~l~ps~~e~~~~~l~Ea~a~G~Pvi~s~~~~----~~e~i~~-~~~g~~~~~-- 352 (398)
T cd03800 282 IDRVDFPGRVSREDLPALYRAADV--FVNPALYEPFGLTALEAMACGLPVVATAVGG----PRDIVVD-GVTGLLVDP-- 352 (398)
T ss_pred CceEEEeccCCHHHHHHHHHhCCE--EEecccccccCcHHHHHHhcCCCEEECCCCC----HHHHccC-CCCeEEeCC--
Confidence 47888899999875 5889998 66432 2 358999999999999876443 4555666 678888753
Q ss_pred CCCcCHHHHHHHHHHHhcC
Q 045998 349 DGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 349 ~~~~~~~~l~~~i~~vl~~ 367 (408)
-+.+++.++|.+++.+
T Consensus 353 ---~~~~~l~~~i~~l~~~ 368 (398)
T cd03800 353 ---RDPEALAAALRRLLTD 368 (398)
T ss_pred ---CCHHHHHHHHHHHHhC
Confidence 3689999999999987
No 46
>PRK05749 3-deoxy-D-manno-octulosonic-acid transferase; Reviewed
Probab=98.27 E-value=0.00048 Score=69.08 Aligned_cols=80 Identities=16% Similarity=0.160 Sum_probs=59.1
Q ss_pred CeEEEecccH-HHHhcccCcceEEec-----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCC
Q 045998 278 RGLVVKWCSQ-EKVLMHAAVSCFLTH-----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGT 351 (408)
Q Consensus 278 n~~v~~w~pq-~~lL~h~~v~~fitH-----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 351 (408)
++.+.+...+ ..+++.+++ ++.. +|..+++||+++|+|+|+-|..+++......+.+ .|+++...
T Consensus 303 ~v~l~~~~~el~~~y~~aDi--~~v~~S~~e~~g~~~lEAma~G~PVI~g~~~~~~~e~~~~~~~-~g~~~~~~------ 373 (425)
T PRK05749 303 DVLLGDTMGELGLLYAIADI--AFVGGSLVKRGGHNPLEPAAFGVPVISGPHTFNFKEIFERLLQ-AGAAIQVE------ 373 (425)
T ss_pred cEEEEecHHHHHHHHHhCCE--EEECCCcCCCCCCCHHHHHHhCCCEEECCCccCHHHHHHHHHH-CCCeEEEC------
Confidence 3444443333 367888887 4432 3444699999999999999998888888777766 67766542
Q ss_pred cCHHHHHHHHHHHhcC
Q 045998 352 LSIQQVQRCIDEATQG 367 (408)
Q Consensus 352 ~~~~~l~~~i~~vl~~ 367 (408)
+.+++.+++.++++|
T Consensus 374 -d~~~La~~l~~ll~~ 388 (425)
T PRK05749 374 -DAEDLAKAVTYLLTD 388 (425)
T ss_pred -CHHHHHHHHHHHhcC
Confidence 579999999999987
No 47
>PRK14089 ipid-A-disaccharide synthase; Provisional
Probab=98.24 E-value=5.2e-05 Score=73.55 Aligned_cols=146 Identities=14% Similarity=0.076 Sum_probs=85.1
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCC--CEEEEEecCCcccccccchhhhhhcC--CCeEEEecccHHHHhcccCc
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINTKR--PFLWVIRSQENKEGGVLRAGFLEETK--DRGLVVKWCSQEKVLMHAAV 296 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~--~~iw~~~~~~~~~~~~lp~~~~~~~~--~n~~v~~w~pq~~lL~h~~v 296 (408)
++|.+--||...--...+-.++++...... ...+....... +.+.+... ....+.+ .-.+++..+++
T Consensus 168 ~~I~llPGSR~~Ei~~llP~~~~aa~~L~~~~~~~~i~~a~~~-------~~i~~~~~~~~~~~~~~--~~~~~m~~aDl 238 (347)
T PRK14089 168 GTIAFMPGSRKSEIKRLMPIFKELAKKLEGKEKILVVPSFFKG-------KDLKEIYGDISEFEISY--DTHKALLEAEF 238 (347)
T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHHHhhcCcEEEEeCCCcH-------HHHHHHHhcCCCcEEec--cHHHHHHhhhH
Confidence 588899999774222344434444443222 22222222211 11111111 1233332 34578999999
Q ss_pred ceEEeccCcchHHHHHHcCCceeeccCC--CChhhhHHhhh---ceeeeEEEeec----C------CCCCcCHHHHHHHH
Q 045998 297 SCFLTHCGWNSTLETVAAGVPVIAYPEW--TDQPTDAKLLV---DVFKIGVRMRN----E------EDGTLSIQQVQRCI 361 (408)
Q Consensus 297 ~~fitHgG~~s~~eal~~GvP~i~~P~~--~DQ~~na~~v~---~~~g~G~~l~~----~------~~~~~~~~~l~~~i 361 (408)
.|+-+|..|+ |+..+|+|||+ +.- .=|+.||+++. . .|..-.+-. . -++..|.+.|.+++
T Consensus 239 --al~~SGT~TL-E~al~g~P~Vv-~Yk~~~lty~iak~lv~~~~-igL~Nii~~~~~~~~vvPEllQ~~~t~~~la~~i 313 (347)
T PRK14089 239 --AFICSGTATL-EAALIGTPFVL-AYKAKAIDYFIAKMFVKLKH-IGLANIFFDFLGKEPLHPELLQEFVTVENLLKAY 313 (347)
T ss_pred --HHhcCcHHHH-HHHHhCCCEEE-EEeCCHHHHHHHHHHHcCCe-eehHHHhcCCCcccccCchhhcccCCHHHHHHHH
Confidence 9999999999 99999999999 443 35788999998 4 454444411 0 13678899999988
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHH
Q 045998 362 DEATQGLNATQMKKRAVAWKEAA 384 (408)
Q Consensus 362 ~~vl~~~~~~~~~~~a~~l~~~~ 384 (408)
.+. . .+++++...++++.+
T Consensus 314 ~~~-~---~~~~~~~~~~l~~~l 332 (347)
T PRK14089 314 KEM-D---REKFFKKSKELREYL 332 (347)
T ss_pred HHH-H---HHHHHHHHHHHHHHh
Confidence 772 1 134555555544443
No 48
>PF02350 Epimerase_2: UDP-N-acetylglucosamine 2-epimerase; InterPro: IPR003331 UDP-N-acetylglucosamine 2-epimerase 5.1.3.14 from EC catalyses the production of UDP-ManNAc from UDP-GlcNAc. Some of the enzymes is this family are bifunctional. In microorganisms the epimerase is involved in in the synthesis of the capsule precursor UDP-ManNAcA [, ]. The protein from rat liver displays both epimerase and kinase activity [].; GO: 0008761 UDP-N-acetylglucosamine 2-epimerase activity, 0006047 UDP-N-acetylglucosamine metabolic process, 0009103 lipopolysaccharide biosynthetic process; PDB: 1V4V_B 3BEO_B 3DZC_B 3OT5_B 1O6C_B 1VGV_D 1F6D_C.
Probab=98.19 E-value=3.4e-05 Score=75.12 Aligned_cols=269 Identities=13% Similarity=0.115 Sum_probs=134.3
Q ss_pred hhHHHHHHHHHhhcCCCCccEEEE--CCCC-CcHHHHHHHcCCCeEEEecchhHHHHHHHHhhcCCCCCCCCCCCCcccc
Q 045998 44 GSKNLSSIINNLSNNDKKKSCIIT--NPFM-PWVPDVAAEHKIPCAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVH 120 (408)
Q Consensus 44 ~~~~l~~ll~~l~~~~~~~D~vI~--D~~~-~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (408)
+...+.+++.+. +||+||+ |.+. .++..+|..++||.+=+-. +.... +. .
T Consensus 55 ~~~~~~~~~~~~-----~Pd~Vlv~GD~~~~la~alaA~~~~ipv~Hiea-----------------GlRs~-d~----~ 107 (346)
T PF02350_consen 55 AIIELADVLERE-----KPDAVLVLGDRNEALAAALAAFYLNIPVAHIEA-----------------GLRSG-DR----T 107 (346)
T ss_dssp HHHHHHHHHHHH-----T-SEEEEETTSHHHHHHHHHHHHTT-EEEEES----------------------S--T----T
T ss_pred HHHHHHHHHHhc-----CCCEEEEEcCCchHHHHHHHHHHhCCCEEEecC-----------------CCCcc-cc----C
Confidence 345566666664 7899886 6665 5678888999999665411 10000 00 0
Q ss_pred CCCCCCcccCCCCCCCCChhHHhhh-cccceEEccchhhccHHHHHHhhc-c-C--CceeeCCCCCccccCCCCCCCCCC
Q 045998 121 LPAMPSLLVNELPSSLLPSDFVQKL-DKVKWILGSSFYELEENVVASMAT-F-T--PIIPVGPLVSPFMLGKQENATAPS 195 (408)
Q Consensus 121 ~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~lvnt~~~le~~~~~~~~~-~-~--p~~~vGpl~~~~~~~~~~~~~~~g 195 (408)
. |++. . ...... .-+++.++.|-... +.+.. . . .++.+|...-...
T Consensus 108 ~-g~~d-----------e-~~R~~i~~la~lhf~~t~~~~-----~~L~~~G~~~~rI~~vG~~~~D~l----------- 158 (346)
T PF02350_consen 108 E-GMPD-----------E-INRHAIDKLAHLHFAPTEEAR-----ERLLQEGEPPERIFVVGNPGIDAL----------- 158 (346)
T ss_dssp S-STTH-----------H-HHHHHHHHH-SEEEESSHHHH-----HHHHHTT--GGGEEE---HHHHHH-----------
T ss_pred C-CCch-----------h-hhhhhhhhhhhhhccCCHHHH-----HHHHhcCCCCCeEEEEChHHHHHH-----------
Confidence 0 1110 0 011112 23678888887632 23221 1 2 2888887643321
Q ss_pred CCCcccccccchhhh--hhhhccCCCCceEEEecCCcccCC-H---HHHHHHHHHHHhC-CCCEEEEEecCCcccccccc
Q 045998 196 LDMWSTAEECSCIEI--HQWLNKKPPSSVIYISFGSLLVLS-Q---NQIDSIAAALINT-KRPFLWVIRSQENKEGGVLR 268 (408)
Q Consensus 196 ~~~~~~~~~~l~~~l--~~~l~~~~~~~vvyvs~GS~~~~~-~---~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~lp 268 (408)
. ...+...+++ ..++.. .+++.++|++=...... + ..+..++++|.+. +.++||.+...+... ..+
T Consensus 159 ---~-~~~~~~~~~~~~~~i~~~-~~~~~iLvt~H~~t~~~~~~~~~~i~~~l~~L~~~~~~~vi~~~hn~p~~~-~~i- 231 (346)
T PF02350_consen 159 ---L-QNKEEIEEKYKNSGILQD-APKPYILVTLHPVTNEDNPERLEQILEALKALAERQNVPVIFPLHNNPRGS-DII- 231 (346)
T ss_dssp ---H-HHHHTTCC-HHHHHHHHC-TTSEEEEEE-S-CCCCTHH--HHHHHHHHHHHHHHTTEEEEEE--S-HHHH-HHH-
T ss_pred ---H-HhHHHHhhhhhhHHHHhc-cCCCEEEEEeCcchhcCChHHHHHHHHHHHHHHhcCCCcEEEEecCCchHH-HHH-
Confidence 0 0000010011 122223 46789999985555444 3 4566667777765 788999887543210 011
Q ss_pred hhhhhhcCCCeEEEeccc---HHHHhcccCcceEEeccCcchHH-HHHHcCCceeeccCCCChhhhHHhhhceeeeEEEe
Q 045998 269 AGFLEETKDRGLVVKWCS---QEKVLMHAAVSCFLTHCGWNSTL-ETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRM 344 (408)
Q Consensus 269 ~~~~~~~~~n~~v~~w~p---q~~lL~h~~v~~fitHgG~~s~~-eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l 344 (408)
....++. +|+.+++-++ ...+|.++++ +||..| ++. ||.+.|+|.|.+=-.++.+.- +. .|..+.+
T Consensus 232 ~~~l~~~-~~v~~~~~l~~~~~l~ll~~a~~--vvgdSs--GI~eEa~~lg~P~v~iR~~geRqe~---r~--~~~nvlv 301 (346)
T PF02350_consen 232 IEKLKKY-DNVRLIEPLGYEEYLSLLKNADL--VVGDSS--GIQEEAPSLGKPVVNIRDSGERQEG---RE--RGSNVLV 301 (346)
T ss_dssp HHHHTT--TTEEEE----HHHHHHHHHHESE--EEESSH--HHHHHGGGGT--EEECSSS-S-HHH---HH--TTSEEEE
T ss_pred HHHhccc-CCEEEECCCCHHHHHHHHhcceE--EEEcCc--cHHHHHHHhCCeEEEecCCCCCHHH---Hh--hcceEEe
Confidence 1112234 5898886555 4578899999 999999 676 999999999999333333322 22 3555554
Q ss_pred ecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 045998 345 RNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANI 398 (408)
Q Consensus 345 ~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~ 398 (408)
+ .+.++|.+++++++.+ ..+.++......-+ ++|.++.+-+
T Consensus 302 -----~-~~~~~I~~ai~~~l~~---~~~~~~~~~~~npY----gdG~as~rI~ 342 (346)
T PF02350_consen 302 -----G-TDPEAIIQAIEKALSD---KDFYRKLKNRPNPY----GDGNASERIV 342 (346)
T ss_dssp -----T-SSHHHHHHHHHHHHH----HHHHHHHHCS--TT-----SS-HHHHHH
T ss_pred -----C-CCHHHHHHHHHHHHhC---hHHHHhhccCCCCC----CCCcHHHHHH
Confidence 2 5889999999999975 34444444322222 4555554433
No 49
>COG4671 Predicted glycosyl transferase [General function prediction only]
Probab=98.10 E-value=2.7e-05 Score=73.39 Aligned_cols=134 Identities=16% Similarity=0.172 Sum_probs=101.5
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHh-CCCC--EEEEEecCCcccccccchhhhhh----cC--CCeEEEecccHH-
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALIN-TKRP--FLWVIRSQENKEGGVLRAGFLEE----TK--DRGLVVKWCSQE- 288 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~-~~~~--~iw~~~~~~~~~~~~lp~~~~~~----~~--~n~~v~~w~pq~- 288 (408)
++--|+||-|--.. ..+.+...++|-.. .+.+ .+.++|. ..|+...++ .+ +++.+..|-.+.
T Consensus 218 E~~~Ilvs~GGG~d-G~eLi~~~l~A~~~l~~l~~~~~ivtGP-------~MP~~~r~~l~~~A~~~p~i~I~~f~~~~~ 289 (400)
T COG4671 218 EGFDILVSVGGGAD-GAELIETALAAAQLLAGLNHKWLIVTGP-------FMPEAQRQKLLASAPKRPHISIFEFRNDFE 289 (400)
T ss_pred ccceEEEecCCChh-hHHHHHHHHHHhhhCCCCCcceEEEeCC-------CCCHHHHHHHHHhcccCCCeEEEEhhhhHH
Confidence 34468888776443 44555555555433 3433 5555665 344433322 23 788999987655
Q ss_pred HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCC---ChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHh
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWT---DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~---DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl 365 (408)
.++.-++. +|+-||+||+.|-+.+|+|-+++|... +|..-|.|+++ +|+--.+.. ..+++..+.+++...+
T Consensus 290 ~ll~gA~~--vVSm~GYNTvCeILs~~k~aLivPr~~p~eEQliRA~Rl~~-LGL~dvL~p---e~lt~~~La~al~~~l 363 (400)
T COG4671 290 SLLAGARL--VVSMGGYNTVCEILSFGKPALIVPRAAPREEQLIRAQRLEE-LGLVDVLLP---ENLTPQNLADALKAAL 363 (400)
T ss_pred HHHHhhhe--eeecccchhhhHHHhCCCceEEeccCCCcHHHHHHHHHHHh-cCcceeeCc---ccCChHHHHHHHHhcc
Confidence 78999999 999999999999999999999999864 89999999999 998888876 8899999999999888
Q ss_pred c
Q 045998 366 Q 366 (408)
Q Consensus 366 ~ 366 (408)
.
T Consensus 364 ~ 364 (400)
T COG4671 364 A 364 (400)
T ss_pred c
Confidence 7
No 50
>KOG3349 consensus Predicted glycosyltransferase [General function prediction only]
Probab=98.08 E-value=1.7e-05 Score=65.57 Aligned_cols=114 Identities=16% Similarity=0.132 Sum_probs=78.5
Q ss_pred eEEEecCCcccC---CHHHHHHHHHHHHhCCC-CEEEEEecCCcccccccchhhhh-hcCCCeEE--EecccH-HHHhcc
Q 045998 222 VIYISFGSLLVL---SQNQIDSIAAALINTKR-PFLWVIRSQENKEGGVLRAGFLE-ETKDRGLV--VKWCSQ-EKVLMH 293 (408)
Q Consensus 222 vvyvs~GS~~~~---~~~~~~~~~~al~~~~~-~~iw~~~~~~~~~~~~lp~~~~~-~~~~n~~v--~~w~pq-~~lL~h 293 (408)
.+||+-||.... +.-..++..+.|.+.|. +.+..+|.+.. ..++...+ +..+...+ .+|-|- .+..+.
T Consensus 5 ~vFVTVGtT~Fd~LI~~Vl~~~~~~~L~k~G~~kLiiQ~Grg~~----~~~d~~~~~~k~~gl~id~y~f~psl~e~I~~ 80 (170)
T KOG3349|consen 5 TVFVTVGTTSFDDLISCVLSEEFLQELQKRGFTKLIIQIGRGQP----FFGDPIDLIRKNGGLTIDGYDFSPSLTEDIRS 80 (170)
T ss_pred EEEEEeccccHHHHHHHHcCHHHHHHHHHcCccEEEEEecCCcc----CCCCHHHhhcccCCeEEEEEecCccHHHHHhh
Confidence 699999998721 11223456677788885 67788887632 12222211 11233333 367776 577888
Q ss_pred cCcceEEeccCcchHHHHHHcCCceeeccC----CCChhhhHHhhhceeeeEE
Q 045998 294 AAVSCFLTHCGWNSTLETVAAGVPVIAYPE----WTDQPTDAKLLVDVFKIGV 342 (408)
Q Consensus 294 ~~v~~fitHgG~~s~~eal~~GvP~i~~P~----~~DQ~~na~~v~~~~g~G~ 342 (408)
+++ +|+|+|.||++|.+..|+|.|+++= -..|..-|..+++ .|-=.
T Consensus 81 Adl--VIsHAGaGS~letL~l~KPlivVvNd~LMDNHQ~ELA~qL~~-egyL~ 130 (170)
T KOG3349|consen 81 ADL--VISHAGAGSCLETLRLGKPLIVVVNDSLMDNHQLELAKQLAE-EGYLY 130 (170)
T ss_pred ccE--EEecCCcchHHHHHHcCCCEEEEeChHhhhhHHHHHHHHHHh-cCcEE
Confidence 999 9999999999999999999999983 4578889999988 55433
No 51
>cd03798 GT1_wlbH_like This family is most closely related to the GT1 family of glycosyltransferases. wlbH in Bordetella parapertussis has been shown to be required for the biosynthesis of a trisaccharide that, when attached to the B. pertussis lipopolysaccharide (LPS) core (band B), generates band A LPS.
Probab=98.05 E-value=0.0038 Score=59.77 Aligned_cols=136 Identities=17% Similarity=0.121 Sum_probs=81.7
Q ss_pred CceEEEecCCcccC-CHHHHHHHHHHHHhCCCCEEEEE-ecCCcccccccchhhhh--hcCCCeEEEecccHH---HHhc
Q 045998 220 SSVIYISFGSLLVL-SQNQIDSIAAALINTKRPFLWVI-RSQENKEGGVLRAGFLE--ETKDRGLVVKWCSQE---KVLM 292 (408)
Q Consensus 220 ~~vvyvs~GS~~~~-~~~~~~~~~~al~~~~~~~iw~~-~~~~~~~~~~lp~~~~~--~~~~n~~v~~w~pq~---~lL~ 292 (408)
+..+++..|+.... ..+.+-..+..+.+.+..+.+.+ +...... .+ ....+ ...+|+.+.+++++. .++.
T Consensus 201 ~~~~i~~~g~~~~~k~~~~li~~~~~~~~~~~~~~l~i~g~~~~~~--~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 277 (377)
T cd03798 201 DKKVILFVGRLVPRKGIDYLIEALARLLKKRPDVHLVIVGDGPLRE--AL-EALAAELGLEDRVTFLGAVPHEEVPAYYA 277 (377)
T ss_pred CceEEEEeccCccccCHHHHHHHHHHHHhcCCCeEEEEEcCCcchH--HH-HHHHHhcCCcceEEEeCCCCHHHHHHHHH
Confidence 34567777876632 22333344444444323343333 3322110 11 11111 134788999999875 5688
Q ss_pred ccCcceEEe--ccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 293 HAAVSCFLT--HCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 293 h~~v~~fit--HgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
.+++..+.+ -|.-++++||+++|+|+|+-+..+ ....+.+ .+.|.... .-+.+++.+++.+++.+.
T Consensus 278 ~ad~~i~~~~~~~~~~~~~Ea~~~G~pvI~~~~~~----~~~~~~~-~~~g~~~~-----~~~~~~l~~~i~~~~~~~ 345 (377)
T cd03798 278 AADVFVLPSLREGFGLVLLEAMACGLPVVATDVGG----IPEIITD-GENGLLVP-----PGDPEALAEAILRLLADP 345 (377)
T ss_pred hcCeeecchhhccCChHHHHHHhcCCCEEEecCCC----hHHHhcC-CcceeEEC-----CCCHHHHHHHHHHHhcCc
Confidence 888833222 245678999999999999865433 4455665 66677774 457899999999999873
No 52
>cd03822 GT1_ecORF704_like This family is most closely related to the GT1 family of glycosyltransferases. ORF704 in E. coli has been shown to be involved in the biosynthesis of O-specific mannose homopolysaccharides.
Probab=97.93 E-value=0.014 Score=56.17 Aligned_cols=82 Identities=17% Similarity=0.178 Sum_probs=58.2
Q ss_pred cCCCeEEE-ecccHH---HHhcccCcceEEec----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeec
Q 045998 275 TKDRGLVV-KWCSQE---KVLMHAAVSCFLTH----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRN 346 (408)
Q Consensus 275 ~~~n~~v~-~w~pq~---~lL~h~~v~~fitH----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 346 (408)
..+|+.+. .|+|+. .+++.+++..+-++ |--++++||+++|+|+|+-+..+ ...+.. .+.|..+..
T Consensus 245 ~~~~v~~~~~~~~~~~~~~~~~~ad~~v~ps~~e~~~~~~~~~Ea~a~G~PvI~~~~~~-----~~~i~~-~~~g~~~~~ 318 (366)
T cd03822 245 LADRVIFINRYLPDEELPELFSAADVVVLPYRSADQTQSGVLAYAIGFGKPVISTPVGH-----AEEVLD-GGTGLLVPP 318 (366)
T ss_pred CCCcEEEecCcCCHHHHHHHHhhcCEEEecccccccccchHHHHHHHcCCCEEecCCCC-----hheeee-CCCcEEEcC
Confidence 34678777 458865 67888888332222 23457899999999999987654 333444 577877753
Q ss_pred CCCCCcCHHHHHHHHHHHhcC
Q 045998 347 EEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 347 ~~~~~~~~~~l~~~i~~vl~~ 367 (408)
-+.+++.+++.+++++
T Consensus 319 -----~d~~~~~~~l~~l~~~ 334 (366)
T cd03822 319 -----GDPAALAEAIRRLLAD 334 (366)
T ss_pred -----CCHHHHHHHHHHHHcC
Confidence 3589999999999987
No 53
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=97.88 E-value=0.03 Score=55.48 Aligned_cols=81 Identities=17% Similarity=0.173 Sum_probs=59.0
Q ss_pred CCeEEEecccHHH---HhcccCcceEEec-cCc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCC
Q 045998 277 DRGLVVKWCSQEK---VLMHAAVSCFLTH-CGW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGT 351 (408)
Q Consensus 277 ~n~~v~~w~pq~~---lL~h~~v~~fitH-gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 351 (408)
+++.+.+++|+.+ +|+.+++-++.+. .|. ++++||+++|+|+|+... ......+.+ -..|..+. .
T Consensus 281 ~~V~f~G~v~~~~~~~~l~~adv~v~~s~~e~~~~~llEAmA~G~PVIas~~----~g~~e~i~~-~~~G~lv~-----~ 350 (396)
T cd03818 281 SRVHFLGRVPYDQYLALLQVSDVHVYLTYPFVLSWSLLEAMACGCLVVGSDT----APVREVITD-GENGLLVD-----F 350 (396)
T ss_pred ceEEEeCCCCHHHHHHHHHhCcEEEEcCcccccchHHHHHHHCCCCEEEcCC----CCchhhccc-CCceEEcC-----C
Confidence 6788889999774 6788888333333 222 478999999999998643 344455554 45787774 3
Q ss_pred cCHHHHHHHHHHHhcC
Q 045998 352 LSIQQVQRCIDEATQG 367 (408)
Q Consensus 352 ~~~~~l~~~i~~vl~~ 367 (408)
-+.+++.++|.+++.+
T Consensus 351 ~d~~~la~~i~~ll~~ 366 (396)
T cd03818 351 FDPDALAAAVIELLDD 366 (396)
T ss_pred CCHHHHHHHHHHHHhC
Confidence 4689999999999987
No 54
>PF02684 LpxB: Lipid-A-disaccharide synthetase; InterPro: IPR003835 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. These enzymes belong to the glycosyltransferase family 19 GT19 from CAZY. Lipid-A-disaccharide synthetase 2.4.1.182 from EC is involved with acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase 2.3.1.129 from EC and tetraacyldisaccharide 4'-kinase 2.7.1.130 from EC in the biosynthesis of the phosphorylated glycolipid, lipid A, in the outer membrane of Escherichia coli and other bacteria. These enzymes catalyse the first disaccharide step in the synthesis of lipid-A-disaccharide.; GO: 0008915 lipid-A-disaccharide synthase activity, 0009245 lipid A biosynthetic process
Probab=97.85 E-value=0.0034 Score=61.49 Aligned_cols=171 Identities=19% Similarity=0.158 Sum_probs=98.3
Q ss_pred CCCceEEEecCCcccCCHHHHHHHHHHH---Hh--CCCCEEEEEecCCcccccccchhhhhhcCCCeEEE-ecccHHHHh
Q 045998 218 PPSSVIYISFGSLLVLSQNQIDSIAAAL---IN--TKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVV-KWCSQEKVL 291 (408)
Q Consensus 218 ~~~~vvyvs~GS~~~~~~~~~~~~~~al---~~--~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~-~w~pq~~lL 291 (408)
+++++|-+--||-..-=...+-.++++. .+ .+.+|++..-..... .+-.........++.+. ..-.-.+++
T Consensus 182 ~~~~iIaLLPGSR~~EI~rllP~~l~aa~~l~~~~p~l~fvvp~a~~~~~---~~i~~~~~~~~~~~~~~~~~~~~~~~m 258 (373)
T PF02684_consen 182 PDKPIIALLPGSRKSEIKRLLPIFLEAAKLLKKQRPDLQFVVPVAPEVHE---ELIEEILAEYPPDVSIVIIEGESYDAM 258 (373)
T ss_pred CCCcEEEEeCCCCHHHHHHHHHHHHHHHHHHHHhCCCeEEEEecCCHHHH---HHHHHHHHhhCCCCeEEEcCCchHHHH
Confidence 3567899999996531112223334443 33 355666654332111 10011111222333333 223455788
Q ss_pred cccCcceEEeccCcchHHHHHHcCCceeeccCCC-ChhhhHHhhhceee-eEEE--eecCC------CCCcCHHHHHHHH
Q 045998 292 MHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWT-DQPTDAKLLVDVFK-IGVR--MRNEE------DGTLSIQQVQRCI 361 (408)
Q Consensus 292 ~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~-DQ~~na~~v~~~~g-~G~~--l~~~~------~~~~~~~~l~~~i 361 (408)
..+++ .+.-+|. .++|+...|+|||++=-.. =-+.-++++.+ .. +|+. +-... ++..+.+.|..++
T Consensus 259 ~~ad~--al~~SGT-aTLE~Al~g~P~Vv~Yk~~~lt~~iak~lvk-~~~isL~Niia~~~v~PEliQ~~~~~~~i~~~~ 334 (373)
T PF02684_consen 259 AAADA--ALAASGT-ATLEAALLGVPMVVAYKVSPLTYFIAKRLVK-VKYISLPNIIAGREVVPELIQEDATPENIAAEL 334 (373)
T ss_pred HhCcc--hhhcCCH-HHHHHHHhCCCEEEEEcCcHHHHHHHHHhhc-CCEeechhhhcCCCcchhhhcccCCHHHHHHHH
Confidence 88888 6766665 6789999999999963221 22334555554 22 2210 00000 4788999999999
Q ss_pred HHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHH
Q 045998 362 DEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANI 398 (408)
Q Consensus 362 ~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~ 398 (408)
.+++.| ...++..+...+.+++..+.|.++....
T Consensus 335 ~~ll~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 368 (373)
T PF02684_consen 335 LELLEN---PEKRKKQKELFREIRQLLGPGASSRAAQ 368 (373)
T ss_pred HHHhcC---HHHHHHHHHHHHHHHHhhhhccCCHHHH
Confidence 999998 5557777777777777777777765443
No 55
>TIGR02472 sucr_P_syn_N sucrose-phosphate synthase, putative, glycosyltransferase domain. This family consists of the N-terminal regions, or in some cases the entirety, of bacterial proteins closely related to plant sucrose-phosphate synthases (SPS). The C-terminal domain (TIGR02471), found with most members of this family, resembles both bona fide plant sucrose-phosphate phosphatases (SPP) and the SPP-like domain of plant SPS. At least two members of this family lack the SPP-like domain, which may have binding or regulatory rather than enzymatic activity by analogy to plant SPS. This enzyme produces sucrose 6-phosphate and UDP from UDP-glucose and D-fructose 6-phosphate, and may be encoded near the gene for fructokinase.
Probab=97.84 E-value=0.0096 Score=60.05 Aligned_cols=81 Identities=16% Similarity=0.282 Sum_probs=58.6
Q ss_pred cCCCeEEEecccHHHH---hccc----CcceEEecc---C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEE
Q 045998 275 TKDRGLVVKWCSQEKV---LMHA----AVSCFLTHC---G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVR 343 (408)
Q Consensus 275 ~~~n~~v~~w~pq~~l---L~h~----~v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~ 343 (408)
+.+++.+.+++++.++ ++.+ ++ ||... | -.+++||+++|+|+|+-...+ ....+.+ -..|+.
T Consensus 315 l~~~V~f~g~~~~~~~~~~~~~a~~~~Dv--~v~pS~~E~fg~~~lEAma~G~PvV~s~~gg----~~eiv~~-~~~G~l 387 (439)
T TIGR02472 315 LYGKVAYPKHHRPDDVPELYRLAARSRGI--FVNPALTEPFGLTLLEAAACGLPIVATDDGG----PRDIIAN-CRNGLL 387 (439)
T ss_pred CCceEEecCCCCHHHHHHHHHHHhhcCCE--EecccccCCcccHHHHHHHhCCCEEEeCCCC----cHHHhcC-CCcEEE
Confidence 3577888888887654 6544 56 77643 3 358999999999999986533 3444554 457877
Q ss_pred eecCCCCCcCHHHHHHHHHHHhcC
Q 045998 344 MRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 344 l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+. .-+.+++.++|.+++++
T Consensus 388 v~-----~~d~~~la~~i~~ll~~ 406 (439)
T TIGR02472 388 VD-----VLDLEAIASALEDALSD 406 (439)
T ss_pred eC-----CCCHHHHHHHHHHHHhC
Confidence 75 34789999999999987
No 56
>COG1519 KdtA 3-deoxy-D-manno-octulosonic-acid transferase [Cell envelope biogenesis, outer membrane]
Probab=97.82 E-value=0.0058 Score=59.65 Aligned_cols=132 Identities=17% Similarity=0.161 Sum_probs=88.5
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhC--CCCEEEEEecCCcccccccchhhhh---------------hcCCCeEEEecc
Q 045998 223 IYISFGSLLVLSQNQIDSIAAALINT--KRPFLWVIRSQENKEGGVLRAGFLE---------------ETKDRGLVVKWC 285 (408)
Q Consensus 223 vyvs~GS~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~lp~~~~~---------------~~~~n~~v~~w~ 285 (408)
+.|.-+| ....++.+.+...+|.+. +...||+=+..+... .+ ++..+ ....++.+.+-+
T Consensus 233 v~iaaST-H~GEeei~l~~~~~l~~~~~~~llIlVPRHpERf~--~v-~~l~~~~gl~~~~rS~~~~~~~~tdV~l~Dtm 308 (419)
T COG1519 233 VWVAAST-HEGEEEIILDAHQALKKQFPNLLLILVPRHPERFK--AV-ENLLKRKGLSVTRRSQGDPPFSDTDVLLGDTM 308 (419)
T ss_pred eEEEecC-CCchHHHHHHHHHHHHhhCCCceEEEecCChhhHH--HH-HHHHHHcCCeEEeecCCCCCCCCCcEEEEecH
Confidence 4444444 555666677777777663 466777655443210 00 00000 012356666543
Q ss_pred -cHHHHhcccCc----ceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHH
Q 045998 286 -SQEKVLMHAAV----SCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRC 360 (408)
Q Consensus 286 -pq~~lL~h~~v----~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~ 360 (408)
-...+++-+++ |-|+-+||+| .+|+.++|+|+|.-|...-|..-++++.+ .|.|+.++ +++.+.++
T Consensus 309 GEL~l~y~~adiAFVGGSlv~~GGHN-~LEpa~~~~pvi~Gp~~~Nf~ei~~~l~~-~ga~~~v~-------~~~~l~~~ 379 (419)
T COG1519 309 GELGLLYGIADIAFVGGSLVPIGGHN-PLEPAAFGTPVIFGPYTFNFSDIAERLLQ-AGAGLQVE-------DADLLAKA 379 (419)
T ss_pred hHHHHHHhhccEEEECCcccCCCCCC-hhhHHHcCCCEEeCCccccHHHHHHHHHh-cCCeEEEC-------CHHHHHHH
Confidence 34455665655 3366799987 68999999999999999999999999998 89999995 27889999
Q ss_pred HHHHhcC
Q 045998 361 IDEATQG 367 (408)
Q Consensus 361 i~~vl~~ 367 (408)
+..++.|
T Consensus 380 v~~l~~~ 386 (419)
T COG1519 380 VELLLAD 386 (419)
T ss_pred HHHhcCC
Confidence 9888886
No 57
>cd03804 GT1_wbaZ_like This family is most closely related to the GT1 family of glycosyltransferases. wbaZ in Salmonella enterica has been shown to possess the mannosyl transferase activity. The members of this family are found in certain bacteria and Archaea.
Probab=97.80 E-value=0.00082 Score=65.33 Aligned_cols=127 Identities=17% Similarity=0.244 Sum_probs=84.9
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhcccCcceE
Q 045998 223 IYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHAAVSCF 299 (408)
Q Consensus 223 vyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~~v~~f 299 (408)
.++..|+... ......++++++..+.++++ +|..... +.+.+...+|+.+.+++|+. .+++.+++-++
T Consensus 197 ~il~~G~~~~--~K~~~~li~a~~~~~~~l~i-vG~g~~~------~~l~~~~~~~V~~~g~~~~~~~~~~~~~ad~~v~ 267 (351)
T cd03804 197 YYLSVGRLVP--YKRIDLAIEAFNKLGKRLVV-IGDGPEL------DRLRAKAGPNVTFLGRVSDEELRDLYARARAFLF 267 (351)
T ss_pred EEEEEEcCcc--ccChHHHHHHHHHCCCcEEE-EECChhH------HHHHhhcCCCEEEecCCCHHHHHHHHHhCCEEEE
Confidence 3445566652 23356677777777777555 4443211 23333456899999999985 57889998333
Q ss_pred EeccCc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 300 LTHCGW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 300 itHgG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
-+.-|+ .+++||+++|+|+|+....+ ....+.+ -+.|+.+.. -+.+++.++|.++++++
T Consensus 268 ps~e~~g~~~~Eama~G~Pvi~~~~~~----~~e~i~~-~~~G~~~~~-----~~~~~la~~i~~l~~~~ 327 (351)
T cd03804 268 PAEEDFGIVPVEAMASGTPVIAYGKGG----ALETVID-GVTGILFEE-----QTVESLAAAVERFEKNE 327 (351)
T ss_pred CCcCCCCchHHHHHHcCCCEEEeCCCC----CcceeeC-CCCEEEeCC-----CCHHHHHHHHHHHHhCc
Confidence 344444 35789999999999986543 3344554 568888753 36788999999999874
No 58
>cd03823 GT1_ExpE7_like This family is most closely related to the GT1 family of glycosyltransferases. ExpE7 in Sinorhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucans (exopolysaccharide II).
Probab=97.75 E-value=0.0015 Score=62.74 Aligned_cols=134 Identities=16% Similarity=0.072 Sum_probs=81.2
Q ss_pred CCceEEEecCCcccC-CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHH---Hhccc
Q 045998 219 PSSVIYISFGSLLVL-SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEK---VLMHA 294 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~---lL~h~ 294 (408)
....+++..|+.... ..+.+.+.+..+.+.+.++++ +|..... . ..........++.+.+|+++.+ +++.+
T Consensus 189 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~l~i-~G~~~~~---~-~~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 263 (359)
T cd03823 189 GGRLRFGFIGQLTPHKGVDLLLEAFKRLPRGDIELVI-VGNGLEL---E-EESYELEGDPRVEFLGAYPQEEIDDFYAEI 263 (359)
T ss_pred CCceEEEEEecCccccCHHHHHHHHHHHHhcCcEEEE-EcCchhh---h-HHHHhhcCCCeEEEeCCCCHHHHHHHHHhC
Confidence 344667777886632 223333333333333455544 4443221 0 0001012347888999997664 58899
Q ss_pred CcceEEec--cCc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 295 AVSCFLTH--CGW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 295 ~v~~fitH--gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++..+-++ .|+ .+++||+++|+|+|+.+.. .+...+.+ .+.|..+.. -+.+++.+++++++++
T Consensus 264 d~~i~ps~~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~~-----~d~~~l~~~i~~l~~~ 329 (359)
T cd03823 264 DVLVVPSIWPENFPLVIREALAAGVPVIASDIG----GMAELVRD-GVNGLLFPP-----GDAEDLAAALERLIDD 329 (359)
T ss_pred CEEEEcCcccCCCChHHHHHHHCCCCEEECCCC----CHHHHhcC-CCcEEEECC-----CCHHHHHHHHHHHHhC
Confidence 98332232 333 4789999999999997643 35555665 557887753 3589999999999987
No 59
>cd04946 GT1_AmsK_like This family is most closely related to the GT1 family of glycosyltransferases. AmsK is involved in the biosynthesis of amylovoran, which functions as a virulence factor. It functions as a glycosyl transferase which transfers galactose from UDP-galactose to a lipid-linked amylovoran-subunit precursor. The members of this family are found mainly in bacteria and Archaea.
Probab=97.75 E-value=0.0016 Score=65.04 Aligned_cols=164 Identities=15% Similarity=0.149 Sum_probs=93.8
Q ss_pred ceEEEecCCcccCC-HHHHHHHHHHHHhC--CCCEEEEE-ecCCcccccccchhhhhh--cCCCeEEEecccHHH---Hh
Q 045998 221 SVIYISFGSLLVLS-QNQIDSIAAALINT--KRPFLWVI-RSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQEK---VL 291 (408)
Q Consensus 221 ~vvyvs~GS~~~~~-~~~~~~~~~al~~~--~~~~iw~~-~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq~~---lL 291 (408)
...+++.|...... -+.+-+.+..+.+. +.++.|.+ |.+... ..+ ....+. ...++.+.+|+++.+ ++
T Consensus 230 ~~~il~~Grl~~~Kg~~~li~a~~~l~~~~p~~~l~~~iiG~g~~~--~~l-~~~~~~~~~~~~V~f~G~v~~~e~~~~~ 306 (407)
T cd04946 230 TLRIVSCSYLVPVKRVDLIIKALAALAKARPSIKIKWTHIGGGPLE--DTL-KELAESKPENISVNFTGELSNSEVYKLY 306 (407)
T ss_pred CEEEEEeeccccccCHHHHHHHHHHHHHhCCCceEEEEEEeCchHH--HHH-HHHHHhcCCCceEEEecCCChHHHHHHH
Confidence 45666677766322 23333333333322 24666654 432211 011 111111 235678889999774 44
Q ss_pred cccCcceEEeccC----cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 292 MHAAVSCFLTHCG----WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 292 ~h~~v~~fitHgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
..+++.+|+...- -++++||+++|+|+|+-...+ ....+.+ .+.|..+. ..-+.+++.++|.+++.+
T Consensus 307 ~~~~~~v~v~~S~~Eg~p~~llEAma~G~PVIas~vgg----~~e~i~~-~~~G~l~~----~~~~~~~la~~I~~ll~~ 377 (407)
T cd04946 307 KENPVDVFVNLSESEGLPVSIMEAMSFGIPVIATNVGG----TPEIVDN-GGNGLLLS----KDPTPNELVSSLSKFIDN 377 (407)
T ss_pred hhcCCCEEEeCCccccccHHHHHHHHcCCCEEeCCCCC----cHHHhcC-CCcEEEeC----CCCCHHHHHHHHHHHHhC
Confidence 4444444776553 457999999999999865433 4455665 45888875 345789999999999987
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 045998 368 LNATQMKKRAVAWKEAAKKALEDGGSSDANINRFI 402 (408)
Q Consensus 368 ~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v 402 (408)
+..+ +++++..++.+.+.=+.+.+.++|+
T Consensus 378 ---~~~~---~~m~~~ar~~~~~~f~~~~~~~~~~ 406 (407)
T cd04946 378 ---EEEY---QTMREKAREKWEENFNASKNYREFA 406 (407)
T ss_pred ---HHHH---HHHHHHHHHHHHHHcCHHHhHHHhc
Confidence 3322 3344555555555455556666554
No 60
>cd05844 GT1_like_7 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=97.74 E-value=0.0012 Score=64.33 Aligned_cols=81 Identities=17% Similarity=0.131 Sum_probs=62.0
Q ss_pred cCCCeEEEecccHH---HHhcccCcceEEec----------cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeE
Q 045998 275 TKDRGLVVKWCSQE---KVLMHAAVSCFLTH----------CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIG 341 (408)
Q Consensus 275 ~~~n~~v~~w~pq~---~lL~h~~v~~fitH----------gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G 341 (408)
..+++.+.+++|+. .+++.+++ ||.. |--++++||+++|+|+|+-+..+ +...+.+ .+.|
T Consensus 243 ~~~~v~~~g~~~~~~l~~~~~~ad~--~v~ps~~~~~~~~E~~~~~~~EA~a~G~PvI~s~~~~----~~e~i~~-~~~g 315 (367)
T cd05844 243 LGGRVTFLGAQPHAEVRELMRRARI--FLQPSVTAPSGDAEGLPVVLLEAQASGVPVVATRHGG----IPEAVED-GETG 315 (367)
T ss_pred CCCeEEECCCCCHHHHHHHHHhCCE--EEECcccCCCCCccCCchHHHHHHHcCCCEEEeCCCC----chhheec-CCee
Confidence 35788888999875 45889998 5532 23568999999999999876643 5566665 6788
Q ss_pred EEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 342 VRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 342 ~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
..++ .-+.+++.++|.+++.+
T Consensus 316 ~~~~-----~~d~~~l~~~i~~l~~~ 336 (367)
T cd05844 316 LLVP-----EGDVAALAAALGRLLAD 336 (367)
T ss_pred EEEC-----CCCHHHHHHHHHHHHcC
Confidence 8774 34679999999999987
No 61
>TIGR02918 accessory Sec system glycosylation protein GtfA. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus. Members are associated with glycosylation of serine-rich glycoproteins exported by the accessory Sec system.
Probab=97.71 E-value=0.0067 Score=62.15 Aligned_cols=102 Identities=17% Similarity=0.157 Sum_probs=66.7
Q ss_pred CCCeEEEecccHHHHhcccCcceEEe---ccC-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCC--C
Q 045998 276 KDRGLVVKWCSQEKVLMHAAVSCFLT---HCG-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEE--D 349 (408)
Q Consensus 276 ~~n~~v~~w~pq~~lL~h~~v~~fit---HgG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~--~ 349 (408)
.+++...++.+...+++.+++ ||. +=| -.+++||+++|+|+|+....+ .+...+++ -..|..+.... +
T Consensus 375 ~~~V~f~G~~~~~~~~~~adv--~v~pS~~Egfgl~~lEAma~G~PVI~~dv~~---G~~eiI~~-g~nG~lv~~~~~~~ 448 (500)
T TIGR02918 375 QDYIHLKGHRNLSEVYKDYEL--YLSASTSEGFGLTLMEAVGSGLGMIGFDVNY---GNPTFIED-NKNGYLIPIDEEED 448 (500)
T ss_pred CCeEEEcCCCCHHHHHHhCCE--EEEcCccccccHHHHHHHHhCCCEEEecCCC---CCHHHccC-CCCEEEEeCCcccc
Confidence 466788888888899999999 664 233 358999999999999975431 13344554 45677775310 0
Q ss_pred CCcC-HHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 045998 350 GTLS-IQQVQRCIDEATQGLNATQMKKRAVAWKEA 383 (408)
Q Consensus 350 ~~~~-~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~ 383 (408)
..-+ .+++.++|.+++.++....+.++|++.++.
T Consensus 449 d~~~~~~~la~~I~~ll~~~~~~~~~~~a~~~a~~ 483 (500)
T TIGR02918 449 DEDQIITALAEKIVEYFNSNDIDAFHEYSYQIAEG 483 (500)
T ss_pred chhHHHHHHHHHHHHHhChHHHHHHHHHHHHHHHh
Confidence 1112 788999999999543333455666554443
No 62
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=97.71 E-value=0.0003 Score=68.71 Aligned_cols=133 Identities=17% Similarity=0.169 Sum_probs=84.4
Q ss_pred CCceEEEecCCcccC-CHHHHHHHHHHHHhCCC-CEEEEEecCCcccccccchhhhhhc---CCCeEEEecccHH---HH
Q 045998 219 PSSVIYISFGSLLVL-SQNQIDSIAAALINTKR-PFLWVIRSQENKEGGVLRAGFLEET---KDRGLVVKWCSQE---KV 290 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~-~~~~~~~~~~al~~~~~-~~iw~~~~~~~~~~~~lp~~~~~~~---~~n~~v~~w~pq~---~l 290 (408)
+++.|++.+|..... ..+.+..+++++.+... ++.+++...+.. ...+-+ ..++. .+|+.+.+..++. .+
T Consensus 197 ~~~~vlv~~~r~~~~~~~k~~~~l~~al~~l~~~~~~vi~~~~~~~-~~~l~~-~~~~~~~~~~~v~~~~~~~~~~~~~l 274 (363)
T cd03786 197 PKKYILVTLHRVENVDDGEQLEEILEALAELAEEDVPVVFPNHPRT-RPRIRE-AGLEFLGHHPNVLLISPLGYLYFLLL 274 (363)
T ss_pred CCCEEEEEeCCccccCChHHHHHHHHHHHHHHhcCCEEEEECCCCh-HHHHHH-HHHhhccCCCCEEEECCcCHHHHHHH
Confidence 345778888876643 45567778888776432 244443322210 002211 11122 3678777655544 56
Q ss_pred hcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 291 LMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 291 L~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+..+++ ||+..| +.+.||+++|+|+|.++-. |. +..+.+ .|+++.+.. +.++|.+++.+++++
T Consensus 275 ~~~ad~--~v~~Sg-gi~~Ea~~~g~PvI~~~~~--~~--~~~~~~-~g~~~~~~~------~~~~i~~~i~~ll~~ 337 (363)
T cd03786 275 LKNADL--VLTDSG-GIQEEASFLGVPVLNLRDR--TE--RPETVE-SGTNVLVGT------DPEAILAAIEKLLSD 337 (363)
T ss_pred HHcCcE--EEEcCc-cHHhhhhhcCCCEEeeCCC--Cc--cchhhh-eeeEEecCC------CHHHHHHHHHHHhcC
Confidence 778998 999999 7778999999999998633 22 334454 577766532 479999999999987
No 63
>cd03795 GT1_like_4 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP-linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.70 E-value=0.00066 Score=65.56 Aligned_cols=132 Identities=17% Similarity=0.134 Sum_probs=83.1
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCC-CCEEEEEecCCcccccccchhhh--hhcCCCeEEEecccHH---HHhccc
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINTK-RPFLWVIRSQENKEGGVLRAGFL--EETKDRGLVVKWCSQE---KVLMHA 294 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~-~~~iw~~~~~~~~~~~~lp~~~~--~~~~~n~~v~~w~pq~---~lL~h~ 294 (408)
..+++..|+... ..-...+++++.+.. .++++ +|..... ..+. ... .....|+.+.+|+|+. .+++.+
T Consensus 191 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~l~i-~G~g~~~--~~~~-~~~~~~~~~~~V~~~g~v~~~~~~~~~~~a 264 (357)
T cd03795 191 RPFFLFVGRLVY--YKGLDVLLEAAAALPDAPLVI-VGEGPLE--AELE-ALAAALGLLDRVRFLGRLDDEEKAALLAAC 264 (357)
T ss_pred CcEEEEeccccc--ccCHHHHHHHHHhccCcEEEE-EeCChhH--HHHH-HHHHhcCCcceEEEcCCCCHHHHHHHHHhC
Confidence 356677787652 233555777777766 44333 3332211 0111 111 1234789999999975 578888
Q ss_pred CcceEEec---cCc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 295 AVSCFLTH---CGW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 295 ~v~~fitH---gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++.++.++ -|+ .+++||+++|+|+|+....+....... . -+.|.... .-+.+++.++|.+++++
T Consensus 265 d~~i~ps~~~~e~~g~~~~Ea~~~g~Pvi~~~~~~~~~~i~~---~-~~~g~~~~-----~~d~~~~~~~i~~l~~~ 332 (357)
T cd03795 265 DVFVFPSVERSEAFGIVLLEAMAFGKPVISTEIGTGGSYVNL---H-GVTGLVVP-----PGDPAALAEAIRRLLED 332 (357)
T ss_pred CEEEeCCcccccccchHHHHHHHcCCCEEecCCCCchhHHhh---C-CCceEEeC-----CCCHHHHHHHHHHHHHC
Confidence 98444443 343 379999999999999766555543322 2 35676664 34789999999999987
No 64
>cd04949 GT1_gtfA_like This family is most closely related to the GT1 family of glycosyltransferases and is named after gtfA in Streptococcus gordonii, where it plays a role in the O-linked glycosylation of GspB, a cell surface glycoprotein involved in platelet binding. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltra
Probab=97.66 E-value=0.016 Score=56.63 Aligned_cols=98 Identities=18% Similarity=0.166 Sum_probs=66.6
Q ss_pred CCCeEEEecccHH-HHhcccCcceEEecc--CcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCc
Q 045998 276 KDRGLVVKWCSQE-KVLMHAAVSCFLTHC--GWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTL 352 (408)
Q Consensus 276 ~~n~~v~~w~pq~-~lL~h~~v~~fitHg--G~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 352 (408)
.+++.+.++.++. .+++.+++-.+.++. ...+++||+++|+|+|+..... .....+.+ -..|..+. .-
T Consensus 260 ~~~v~~~g~~~~~~~~~~~ad~~v~~S~~Eg~~~~~lEAma~G~PvI~~~~~~---g~~~~v~~-~~~G~lv~-----~~ 330 (372)
T cd04949 260 EDYVFLKGYTRDLDEVYQKAQLSLLTSQSEGFGLSLMEALSHGLPVISYDVNY---GPSEIIED-GENGYLVP-----KG 330 (372)
T ss_pred cceEEEcCCCCCHHHHHhhhhEEEecccccccChHHHHHHhCCCCEEEecCCC---CcHHHccc-CCCceEeC-----CC
Confidence 4677777776655 689999995555553 3458999999999999965431 13345554 56788774 35
Q ss_pred CHHHHHHHHHHHhcCC-cHHHHHHHHHHHHH
Q 045998 353 SIQQVQRCIDEATQGL-NATQMKKRAVAWKE 382 (408)
Q Consensus 353 ~~~~l~~~i~~vl~~~-~~~~~~~~a~~l~~ 382 (408)
+.+++.++|.+++.++ ....+.+++++..+
T Consensus 331 d~~~la~~i~~ll~~~~~~~~~~~~a~~~~~ 361 (372)
T cd04949 331 DIEALAEAIIELLNDPKLLQKFSEAAYENAE 361 (372)
T ss_pred cHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 7899999999999873 12234444444433
No 65
>cd03801 GT1_YqgM_like This family is most closely related to the GT1 family of glycosyltransferases and named after YqgM in Bacillus licheniformis about which little is known. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold.
Probab=97.64 E-value=0.0035 Score=59.71 Aligned_cols=81 Identities=21% Similarity=0.178 Sum_probs=62.0
Q ss_pred cCCCeEEEecccHH---HHhcccCcceEEe----ccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecC
Q 045998 275 TKDRGLVVKWCSQE---KVLMHAAVSCFLT----HCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNE 347 (408)
Q Consensus 275 ~~~n~~v~~w~pq~---~lL~h~~v~~fit----HgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 347 (408)
..+++.+.+++++. .++..+++ +|. -|.-++++||+++|+|+|+.+. ......+.+ .+.|..+..
T Consensus 254 ~~~~v~~~g~~~~~~~~~~~~~~di--~i~~~~~~~~~~~~~Ea~~~g~pvI~~~~----~~~~~~~~~-~~~g~~~~~- 325 (374)
T cd03801 254 LGDRVTFLGFVPDEDLPALYAAADV--FVLPSLYEGFGLVLLEAMAAGLPVVASDV----GGIPEVVED-GETGLLVPP- 325 (374)
T ss_pred CCcceEEEeccChhhHHHHHHhcCE--EEecchhccccchHHHHHHcCCcEEEeCC----CChhHHhcC-CcceEEeCC-
Confidence 45788999999755 57888998 553 2446789999999999999765 335556664 577877753
Q ss_pred CCCCcCHHHHHHHHHHHhcC
Q 045998 348 EDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 348 ~~~~~~~~~l~~~i~~vl~~ 367 (408)
.+.+++.+++.+++.+
T Consensus 326 ----~~~~~l~~~i~~~~~~ 341 (374)
T cd03801 326 ----GDPEALAEAILRLLDD 341 (374)
T ss_pred ----CCHHHHHHHHHHHHcC
Confidence 4589999999999987
No 66
>TIGR02468 sucrsPsyn_pln sucrose phosphate synthase/possible sucrose phosphate phosphatase, plant. Members of this family are sucrose-phosphate synthases of plants. This enzyme is known to exist in multigene families in several species of both monocots and dicots. The N-terminal domain is the glucosyltransferase domain. Members of this family also have a variable linker region and a C-terminal domain that resembles sucrose phosphate phosphatase (SPP) (EC 3.1.3.24) (see TIGR01485), the next and final enzyme of sucrose biosynthesis. The SPP-like domain likely serves a binding and not a catalytic function, as the reported SPP is always encoded by a distinct protein.
Probab=97.60 E-value=0.047 Score=59.86 Aligned_cols=146 Identities=12% Similarity=0.175 Sum_probs=83.6
Q ss_pred hhhhhhhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCC-----CCEEEEEecCCccc-c--------cccchhhh
Q 045998 207 CIEIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTK-----RPFLWVIRSQENKE-G--------GVLRAGFL 272 (408)
Q Consensus 207 ~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~-----~~~iw~~~~~~~~~-~--------~~lp~~~~ 272 (408)
..++..|+.. ++++ ++++.|.... ..-+..+++|+.... ..+.+++|..+... . ..+ ..+.
T Consensus 467 ~~~l~r~~~~-pdkp-vIL~VGRL~p--~KGi~~LIeAf~~L~~l~~~~nL~LIiG~gdd~d~l~~~~~~~l~~L-~~li 541 (1050)
T TIGR02468 467 WSEIMRFFTN-PRKP-MILALARPDP--KKNITTLVKAFGECRPLRELANLTLIMGNRDDIDEMSSGSSSVLTSV-LKLI 541 (1050)
T ss_pred hHHHHhhccc-CCCc-EEEEEcCCcc--ccCHHHHHHHHHHhHhhccCCCEEEEEecCchhhhhhccchHHHHHH-HHHH
Confidence 3456677754 3333 4455566552 223445556655431 24545566432110 0 001 1111
Q ss_pred hh--cCCCeEEEecccHHH---HhcccC--cceEEecc---C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeE
Q 045998 273 EE--TKDRGLVVKWCSQEK---VLMHAA--VSCFLTHC---G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIG 341 (408)
Q Consensus 273 ~~--~~~n~~v~~w~pq~~---lL~h~~--v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G 341 (408)
++ +.+++.+.+++++.+ ++..++ ..+||.-. | -.+++||+++|+|+|+-...+ ....+.. -..|
T Consensus 542 ~~lgL~g~V~FlG~v~~edvp~lYr~Ad~s~DVFV~PS~~EgFGLvlLEAMAcGlPVVASdvGG----~~EII~~-g~nG 616 (1050)
T TIGR02468 542 DKYDLYGQVAYPKHHKQSDVPDIYRLAAKTKGVFINPAFIEPFGLTLIEAAAHGLPMVATKNGG----PVDIHRV-LDNG 616 (1050)
T ss_pred HHhCCCCeEEecCCCCHHHHHHHHHHhhhcCCeeeCCcccCCCCHHHHHHHHhCCCEEEeCCCC----cHHHhcc-CCcE
Confidence 22 347788889988764 565552 12277642 3 358899999999999986543 2223333 3568
Q ss_pred EEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 342 VRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 342 ~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+.++ .-+.++|.++|.+++.+
T Consensus 617 lLVd-----P~D~eaLA~AL~~LL~D 637 (1050)
T TIGR02468 617 LLVD-----PHDQQAIADALLKLVAD 637 (1050)
T ss_pred EEEC-----CCCHHHHHHHHHHHhhC
Confidence 7774 34788999999999987
No 67
>PF13844 Glyco_transf_41: Glycosyl transferase family 41; PDB: 3PE4_C 3PE3_D 3TAX_C 2XGO_A 2JLB_B 2XGM_A 2VSY_B 2XGS_B 2VSN_A.
Probab=97.59 E-value=0.00061 Score=68.09 Aligned_cols=139 Identities=24% Similarity=0.349 Sum_probs=76.1
Q ss_pred CCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhh-c-CCCeEEEecccHHH---Hhc
Q 045998 218 PPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEE-T-KDRGLVVKWCSQEK---VLM 292 (408)
Q Consensus 218 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~-~-~~n~~v~~w~pq~~---lL~ 292 (408)
++..++|.||.+..+.+++.+...++-|++.+...+|..+...... ..+-+.+.+. + ++++.+.++.|+.+ .+.
T Consensus 282 p~d~vvF~~fn~~~KI~p~~l~~W~~IL~~vP~S~L~L~~~~~~~~-~~l~~~~~~~Gv~~~Ri~f~~~~~~~ehl~~~~ 360 (468)
T PF13844_consen 282 PEDAVVFGSFNNLFKISPETLDLWARILKAVPNSRLWLLRFPASGE-ARLRRRFAAHGVDPDRIIFSPVAPREEHLRRYQ 360 (468)
T ss_dssp -SSSEEEEE-S-GGG--HHHHHHHHHHHHHSTTEEEEEEETSTTHH-HHHHHHHHHTTS-GGGEEEEE---HHHHHHHGG
T ss_pred CCCceEEEecCccccCCHHHHHHHHHHHHhCCCcEEEEeeCCHHHH-HHHHHHHHHcCCChhhEEEcCCCCHHHHHHHhh
Confidence 4557999999999999999999999999999999999887543220 0121112111 1 37788888877654 445
Q ss_pred ccCcceEE---eccCcchHHHHHHcCCceeeccCCCC-hhhhHHhhhceeeeEEEeecCCCCCcCHHH-HHHHHHHHhcC
Q 045998 293 HAAVSCFL---THCGWNSTLETVAAGVPVIAYPEWTD-QPTDAKLLVDVFKIGVRMRNEEDGTLSIQQ-VQRCIDEATQG 367 (408)
Q Consensus 293 h~~v~~fi---tHgG~~s~~eal~~GvP~i~~P~~~D-Q~~na~~v~~~~g~G~~l~~~~~~~~~~~~-l~~~i~~vl~~ 367 (408)
..++ ++ ..+|.+|++|||++|||+|.+|--.= ...-+..+.. .|+.-.+-. +.++ +..|| ++-.|
T Consensus 361 ~~DI--~LDT~p~nG~TTt~dALwmGVPvVTl~G~~~~sR~~aSiL~~-lGl~ElIA~------s~~eYv~~Av-~La~D 430 (468)
T PF13844_consen 361 LADI--CLDTFPYNGGTTTLDALWMGVPVVTLPGETMASRVGASILRA-LGLPELIAD------SEEEYVEIAV-RLATD 430 (468)
T ss_dssp G-SE--EE--SSS--SHHHHHHHHHT--EEB---SSGGGSHHHHHHHH-HT-GGGB-S------SHHHHHHHHH-HHHH-
T ss_pred hCCE--EeeCCCCCCcHHHHHHHHcCCCEEeccCCCchhHHHHHHHHH-cCCchhcCC------CHHHHHHHHH-HHhCC
Confidence 5777 54 45788999999999999999994321 1122334444 555543332 3344 44444 55555
No 68
>cd03794 GT1_wbuB_like This family is most closely related to the GT1 family of glycosyltransferases. wbuB in E. coli is involved in the biosynthesis of the O26 O-antigen. It has been proposed to function as an N-acetyl-L-fucosamine (L-FucNAc) transferase.
Probab=97.57 E-value=0.0017 Score=62.66 Aligned_cols=135 Identities=18% Similarity=0.124 Sum_probs=80.6
Q ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHhC-CCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhccc
Q 045998 220 SSVIYISFGSLLV-LSQNQIDSIAAALINT-KRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHA 294 (408)
Q Consensus 220 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~ 294 (408)
+..+++..|+... -..+.+.+.+..+.+. +.++++ +|..... ..+.+.......+|+.+.+++++. .++..+
T Consensus 219 ~~~~i~~~G~~~~~k~~~~l~~~~~~l~~~~~~~l~i-~G~~~~~--~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~~~~ 295 (394)
T cd03794 219 DKFVVLYAGNIGRAQGLDTLLEAAALLKDRPDIRFLI-VGDGPEK--EELKELAKALGLDNVTFLGRVPKEELPELLAAA 295 (394)
T ss_pred CcEEEEEecCcccccCHHHHHHHHHHHhhcCCeEEEE-eCCcccH--HHHHHHHHHcCCCcEEEeCCCChHHHHHHHHhh
Confidence 3467777787663 2234444444444443 444443 4443211 011111111224788889999866 468889
Q ss_pred CcceEEeccC-------cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 295 AVSCFLTHCG-------WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 295 ~v~~fitHgG-------~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++..+-++.+ -++++||+++|+|+|+.+..+.+.. +.+ .+.|..+.. -+.+++.++|.+++.+
T Consensus 296 di~i~~~~~~~~~~~~~p~~~~Ea~~~G~pvi~~~~~~~~~~----~~~-~~~g~~~~~-----~~~~~l~~~i~~~~~~ 365 (394)
T cd03794 296 DVGLVPLKPGPAFEGVSPSKLFEYMAAGKPVLASVDGESAEL----VEE-AGAGLVVPP-----GDPEALAAAILELLDD 365 (394)
T ss_pred CeeEEeccCcccccccCchHHHHHHHCCCcEEEecCCCchhh----hcc-CCcceEeCC-----CCHHHHHHHHHHHHhC
Confidence 9833333321 2347999999999999987665443 333 367777753 3789999999999977
No 69
>PRK15427 colanic acid biosynthesis glycosyltransferase WcaL; Provisional
Probab=97.57 E-value=0.0063 Score=60.75 Aligned_cols=80 Identities=21% Similarity=0.199 Sum_probs=60.0
Q ss_pred CCCeEEEecccHH---HHhcccCcceEEec---------cCc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEE
Q 045998 276 KDRGLVVKWCSQE---KVLMHAAVSCFLTH---------CGW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGV 342 (408)
Q Consensus 276 ~~n~~v~~w~pq~---~lL~h~~v~~fitH---------gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~ 342 (408)
.+++.+.+|+|+. +++..+++ ||.- -|. ++++||+++|+|+|+-...+ ....+.+ -..|.
T Consensus 278 ~~~V~~~G~~~~~el~~~l~~aDv--~v~pS~~~~~g~~Eg~p~~llEAma~G~PVI~t~~~g----~~E~v~~-~~~G~ 350 (406)
T PRK15427 278 EDVVEMPGFKPSHEVKAMLDDADV--FLLPSVTGADGDMEGIPVALMEAMAVGIPVVSTLHSG----IPELVEA-DKSGW 350 (406)
T ss_pred CCeEEEeCCCCHHHHHHHHHhCCE--EEECCccCCCCCccCccHHHHHHHhCCCCEEEeCCCC----chhhhcC-CCceE
Confidence 4788999999986 46888998 6642 244 56899999999999975433 3344554 45787
Q ss_pred EeecCCCCCcCHHHHHHHHHHHhc-C
Q 045998 343 RMRNEEDGTLSIQQVQRCIDEATQ-G 367 (408)
Q Consensus 343 ~l~~~~~~~~~~~~l~~~i~~vl~-~ 367 (408)
.+. .-+.+++.++|.++++ +
T Consensus 351 lv~-----~~d~~~la~ai~~l~~~d 371 (406)
T PRK15427 351 LVP-----ENDAQALAQRLAAFSQLD 371 (406)
T ss_pred EeC-----CCCHHHHHHHHHHHHhCC
Confidence 774 3478999999999998 6
No 70
>PRK15484 lipopolysaccharide 1,2-N-acetylglucosaminetransferase; Provisional
Probab=97.56 E-value=0.0092 Score=58.97 Aligned_cols=83 Identities=16% Similarity=0.208 Sum_probs=60.9
Q ss_pred hcCCCeEEEecccHH---HHhcccCcceEEecc----Cc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEee
Q 045998 274 ETKDRGLVVKWCSQE---KVLMHAAVSCFLTHC----GW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMR 345 (408)
Q Consensus 274 ~~~~n~~v~~w~pq~---~lL~h~~v~~fitHg----G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 345 (408)
+.+.++.+.+++|+. .+++.+++ ||... |. .+++||+++|+|+|+....+ +...+.+ -..|..+.
T Consensus 254 ~l~~~v~~~G~~~~~~l~~~~~~aDv--~v~pS~~~E~f~~~~lEAma~G~PVI~s~~gg----~~Eiv~~-~~~G~~l~ 326 (380)
T PRK15484 254 RIGDRCIMLGGQPPEKMHNYYPLADL--VVVPSQVEEAFCMVAVEAMAAGKPVLASTKGG----ITEFVLE-GITGYHLA 326 (380)
T ss_pred hcCCcEEEeCCCCHHHHHHHHHhCCE--EEeCCCCccccccHHHHHHHcCCCEEEeCCCC----cHhhccc-CCceEEEe
Confidence 345778888999865 56899999 66433 32 57789999999999976532 3445554 45787553
Q ss_pred cCCCCCcCHHHHHHHHHHHhcC
Q 045998 346 NEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 346 ~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
...+.+++.++|.+++.+
T Consensus 327 ----~~~d~~~la~~I~~ll~d 344 (380)
T PRK15484 327 ----EPMTSDSIISDINRTLAD 344 (380)
T ss_pred ----CCCCHHHHHHHHHHHHcC
Confidence 245789999999999988
No 71
>cd03817 GT1_UGDG_like This family is most closely related to the GT1 family of glycosyltransferases. UDP-glucose-diacylglycerol glucosyltransferase (UGDG; also known as 1,2-diacylglycerol 3-glucosyltransferase) catalyzes the transfer of glucose from UDP-glucose to 1,2-diacylglycerol forming 3-D-glucosyl-1,2-diacylglycerol.
Probab=97.55 E-value=0.004 Score=59.86 Aligned_cols=131 Identities=19% Similarity=0.190 Sum_probs=79.6
Q ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHh--CCCCEEEEEecCCcccccccchhhhh--hcCCCeEEEecccHH---HHhc
Q 045998 221 SVIYISFGSLLV-LSQNQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAGFLE--ETKDRGLVVKWCSQE---KVLM 292 (408)
Q Consensus 221 ~vvyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~~~~--~~~~n~~v~~w~pq~---~lL~ 292 (408)
..+++..|+... -..+.+..++..+.+ .+.++++. |...... .+ ....+ ...+|+.+.+++|+. .++.
T Consensus 202 ~~~i~~~G~~~~~k~~~~l~~~~~~~~~~~~~~~l~i~-G~~~~~~--~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~~ 277 (374)
T cd03817 202 EPVLLYVGRLAKEKNIDFLIRAFARLLKEEPDVKLVIV-GDGPERE--EL-EELARELGLADRVIFTGFVPREELPDYYK 277 (374)
T ss_pred CeEEEEEeeeecccCHHHHHHHHHHHHHhCCCeEEEEE-eCCchHH--HH-HHHHHHcCCCCcEEEeccCChHHHHHHHH
Confidence 456666787653 223444444444444 33444443 3322110 11 11111 234788999999976 4688
Q ss_pred ccCcceEEecc----CcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 293 HAAVSCFLTHC----GWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 293 h~~v~~fitHg----G~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
++++ +|..+ .-++++||+++|+|+|+.... ..+..+.+ .+.|..+.. .. . ++.+++.++++++
T Consensus 278 ~ad~--~l~~s~~e~~~~~~~Ea~~~g~PvI~~~~~----~~~~~i~~-~~~g~~~~~---~~--~-~~~~~i~~l~~~~ 344 (374)
T cd03817 278 AADL--FVFASTTETQGLVLLEAMAAGLPVVAVDAP----GLPDLVAD-GENGFLFPP---GD--E-ALAEALLRLLQDP 344 (374)
T ss_pred HcCE--EEecccccCcChHHHHHHHcCCcEEEeCCC----Chhhheec-CceeEEeCC---CC--H-HHHHHHHHHHhCh
Confidence 9998 55333 346899999999999997543 34555665 578888764 22 1 8999999999873
No 72
>PRK01021 lpxB lipid-A-disaccharide synthase; Reviewed
Probab=97.53 E-value=0.027 Score=58.03 Aligned_cols=166 Identities=14% Similarity=0.137 Sum_probs=87.7
Q ss_pred CCCceEEEecCCcccCCHHHHHHHHHHHH--h--CCCCEEEEEecCCcccccccchhhhhhcC-C---CeEEEecccHHH
Q 045998 218 PPSSVIYISFGSLLVLSQNQIDSIAAALI--N--TKRPFLWVIRSQENKEGGVLRAGFLEETK-D---RGLVVKWCSQEK 289 (408)
Q Consensus 218 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~--~--~~~~~iw~~~~~~~~~~~~lp~~~~~~~~-~---n~~v~~w~pq~~ 289 (408)
+++++|-+--||-..-=...+-.++++.+ . ...+|+........ .+.+.+... . ++.++.--...+
T Consensus 411 ~~~~iIaLLPGSR~~EI~rllPv~l~aa~~~~l~~~l~fvvp~a~~~~------~~~i~~~~~~~~~~~~~ii~~~~~~~ 484 (608)
T PRK01021 411 SDKPIVAAFPGSRRGDILRNLTIQVQAFLASSLASTHQLLVSSANPKY------DHLILEVLQQEGCLHSHIVPSQFRYE 484 (608)
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHhccCeEEEEecCchhh------HHHHHHHHhhcCCCCeEEecCcchHH
Confidence 35678999999966322233344555554 2 23456554322111 111222111 1 223331101257
Q ss_pred HhcccCcceEEeccCcchHHHHHHcCCceeeccCCC-ChhhhHHhhhce----ee-----eEEEe--ecCC-CCCcCHHH
Q 045998 290 VLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWT-DQPTDAKLLVDV----FK-----IGVRM--RNEE-DGTLSIQQ 356 (408)
Q Consensus 290 lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~-DQ~~na~~v~~~----~g-----~G~~l--~~~~-~~~~~~~~ 356 (408)
+++.+++ .+.-+|. .++|+...|+|||++=-.. =-+.-++++.+. .+ +|..+ .-=. ++..+.+.
T Consensus 485 ~m~aaD~--aLaaSGT-aTLEaAL~g~PmVV~YK~s~Lty~Iak~Lvki~i~yIsLpNIIagr~VvPEllqgQ~~~tpe~ 561 (608)
T PRK01021 485 LMRECDC--ALAKCGT-IVLETALNQTPTIVTCQLRPFDTFLAKYIFKIILPAYSLPNIILGSTIFPEFIGGKKDFQPEE 561 (608)
T ss_pred HHHhcCe--eeecCCH-HHHHHHHhCCCEEEEEecCHHHHHHHHHHHhccCCeeehhHHhcCCCcchhhcCCcccCCHHH
Confidence 8999998 8888876 5689999999999962211 112233444430 01 11111 0000 25789999
Q ss_pred HHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHH
Q 045998 357 VQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDA 396 (408)
Q Consensus 357 l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~ 396 (408)
|.+++ ++|.| +.+|++.++=-+.+++.+++|-++-.
T Consensus 562 La~~l-~lL~d---~~~r~~~~~~l~~lr~~Lg~~~~~~~ 597 (608)
T PRK01021 562 VAAAL-DILKT---SQSKEKQKDACRDLYQAMNESASTMK 597 (608)
T ss_pred HHHHH-HHhcC---HHHHHHHHHHHHHHHHHhcCCCCCHH
Confidence 99997 78877 45666655555556666665555433
No 73
>PF00534 Glycos_transf_1: Glycosyl transferases group 1; InterPro: IPR001296 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Proteins containign this domain transfer UDP, ADP, GDP or CMP linked sugars to a variety of substrates, including glycogen, fructose-6-phosphate and lipopolysaccharides. The bacterial enzymes are involved in various biosynthetic processes that include exopolysaccharide biosynthesis, lipopolysaccharide core biosynthesis and the biosynthesis of the slime polysaccaride colanic acid. Mutations in this domain of the human N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein are the cause of paroxysmal nocturnal hemoglobinuria (PNH), an acquired hemolytic blood disorder characterised by venous thrombosis, erythrocyte hemolysis, infections and defective hematopoiesis.; GO: 0009058 biosynthetic process; PDB: 2L7C_A 2IV3_B 2IUY_B 2XA9_A 2XA1_B 2X6R_A 2XMP_B 2XA2_B 2X6Q_A 3QHP_B ....
Probab=97.49 E-value=0.0026 Score=54.90 Aligned_cols=134 Identities=19% Similarity=0.217 Sum_probs=83.4
Q ss_pred CCceEEEecCCcccC-CHHHHHHHHHHHHh--CCCCEEEEEecCCcccccccchhhhh--hcCCCeEEEecccHH---HH
Q 045998 219 PSSVIYISFGSLLVL-SQNQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAGFLE--ETKDRGLVVKWCSQE---KV 290 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~-~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~~~~--~~~~n~~v~~w~pq~---~l 290 (408)
++..+++..|+.... ..+.+-.++.-+.+ ...-.++.+|...... .+ ....+ ....++.+.++.++. .+
T Consensus 13 ~~~~~il~~g~~~~~K~~~~li~a~~~l~~~~~~~~~l~i~G~~~~~~--~~-~~~~~~~~~~~~i~~~~~~~~~~l~~~ 89 (172)
T PF00534_consen 13 DKKKIILFIGRLDPEKGIDLLIEAFKKLKEKKNPNYKLVIVGDGEYKK--EL-KNLIEKLNLKENIIFLGYVPDDELDEL 89 (172)
T ss_dssp TTSEEEEEESESSGGGTHHHHHHHHHHHHHHHHTTEEEEEESHCCHHH--HH-HHHHHHTTCGTTEEEEESHSHHHHHHH
T ss_pred CCCeEEEEEecCccccCHHHHHHHHHHHHhhcCCCeEEEEEccccccc--cc-ccccccccccccccccccccccccccc
Confidence 445677778886632 22333333333321 2233445555222110 11 11111 245789999999833 68
Q ss_pred hcccCcceEEec----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 291 LMHAAVSCFLTH----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 291 L~h~~v~~fitH----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
+..+++ +|+. +.-.+++||+++|+|+|+. +...+...+.+ .+.|..+.. .+.+++.++|.+++.
T Consensus 90 ~~~~di--~v~~s~~e~~~~~~~Ea~~~g~pvI~~----~~~~~~e~~~~-~~~g~~~~~-----~~~~~l~~~i~~~l~ 157 (172)
T PF00534_consen 90 YKSSDI--FVSPSRNEGFGLSLLEAMACGCPVIAS----DIGGNNEIIND-GVNGFLFDP-----NDIEELADAIEKLLN 157 (172)
T ss_dssp HHHTSE--EEE-BSSBSS-HHHHHHHHTT-EEEEE----SSTHHHHHSGT-TTSEEEEST-----TSHHHHHHHHHHHHH
T ss_pred ccccee--ccccccccccccccccccccccceeec----cccCCceeecc-ccceEEeCC-----CCHHHHHHHHHHHHC
Confidence 889998 7766 5566999999999999985 45566677776 677999864 399999999999998
Q ss_pred C
Q 045998 367 G 367 (408)
Q Consensus 367 ~ 367 (408)
+
T Consensus 158 ~ 158 (172)
T PF00534_consen 158 D 158 (172)
T ss_dssp H
T ss_pred C
Confidence 7
No 74
>TIGR03568 NeuC_NnaA UDP-N-acetyl-D-glucosamine 2-epimerase, UDP-hydrolysing. This family of enzymes catalyzes the combined epimerization and UDP-hydrolysis of UDP-N-acetylglucosamine to N-acetylmannosamine. This is in contrast to the related enzyme WecB (TIGR00236) which retains the UDP moiety. NeuC acts in concert with NeuA and NeuB to synthesize CMP-N5-acetyl-neuraminate.
Probab=97.49 E-value=0.0074 Score=59.35 Aligned_cols=129 Identities=12% Similarity=0.139 Sum_probs=78.8
Q ss_pred CceEEEecCCcc--c-CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhc--CCCeEEEecc---cHHHHh
Q 045998 220 SSVIYISFGSLL--V-LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEET--KDRGLVVKWC---SQEKVL 291 (408)
Q Consensus 220 ~~vvyvs~GS~~--~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~--~~n~~v~~w~---pq~~lL 291 (408)
++.|+|.+=... . ...+.+..++++|.+.+.++++++...+... ..+-+.+.+.. .+|+.+.+-+ ....++
T Consensus 201 ~~~vlvt~Hp~~~~~~~~~~~l~~li~~L~~~~~~~~vi~P~~~p~~-~~i~~~i~~~~~~~~~v~l~~~l~~~~~l~Ll 279 (365)
T TIGR03568 201 KPYALVTFHPVTLEKESAEEQIKELLKALDELNKNYIFTYPNADAGS-RIINEAIEEYVNEHPNFRLFKSLGQERYLSLL 279 (365)
T ss_pred CCEEEEEeCCCcccccCchHHHHHHHHHHHHhccCCEEEEeCCCCCc-hHHHHHHHHHhcCCCCEEEECCCChHHHHHHH
Confidence 457778775433 2 3457899999999888766666543221110 01111111111 3678888644 455789
Q ss_pred cccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEE-eecCCCCCcCHHHHHHHHHHHhc
Q 045998 292 MHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVR-MRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 292 ~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~-l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
.++++ +||-++.+- .||.+.|+|.|.+- +-+ ...+ .|..+. + ..+.++|.+++++++.
T Consensus 280 ~~a~~--vitdSSggi-~EA~~lg~Pvv~l~---~R~----e~~~-~g~nvl~v------g~~~~~I~~a~~~~~~ 338 (365)
T TIGR03568 280 KNADA--VIGNSSSGI-IEAPSFGVPTINIG---TRQ----KGRL-RADSVIDV------DPDKEEIVKAIEKLLD 338 (365)
T ss_pred HhCCE--EEEcChhHH-HhhhhcCCCEEeec---CCc----hhhh-hcCeEEEe------CCCHHHHHHHHHHHhC
Confidence 99999 998885544 99999999999763 211 1112 243333 3 2467999999998553
No 75
>COG5017 Uncharacterized conserved protein [Function unknown]
Probab=97.42 E-value=0.0018 Score=52.82 Aligned_cols=108 Identities=16% Similarity=0.153 Sum_probs=70.1
Q ss_pred EEEecCCcccCCHHHHH--HHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEec--cc-HHHHhcccCcc
Q 045998 223 IYISFGSLLVLSQNQID--SIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKW--CS-QEKVLMHAAVS 297 (408)
Q Consensus 223 vyvs~GS~~~~~~~~~~--~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w--~p-q~~lL~h~~v~ 297 (408)
++|+-||....-...+. ++..-.+....++|..+|..+.. | +.+ .++.+| .+ -+.+...+++
T Consensus 2 ifVTvGstf~~f~rlv~k~e~~el~~~i~e~lIvQyGn~d~k-----p------vag-l~v~~F~~~~kiQsli~darI- 68 (161)
T COG5017 2 IFVTVGSTFYPFNRLVLKIEVLELTELIQEELIVQYGNGDIK-----P------VAG-LRVYGFDKEEKIQSLIHDARI- 68 (161)
T ss_pred eEEEecCccchHHHHHhhHHHHHHHHHhhhheeeeecCCCcc-----c------ccc-cEEEeechHHHHHHHhhcceE-
Confidence 78999998632111111 12222222345789999886533 2 112 245544 33 3456777887
Q ss_pred eEEeccCcchHHHHHHcCCceeeccCCC--------ChhhhHHhhhceeeeEEEee
Q 045998 298 CFLTHCGWNSTLETVAAGVPVIAYPEWT--------DQPTDAKLLVDVFKIGVRMR 345 (408)
Q Consensus 298 ~fitHgG~~s~~eal~~GvP~i~~P~~~--------DQ~~na~~v~~~~g~G~~l~ 345 (408)
+|+|||.||++.++..++|.|++|--. .|..-|..+++ .+.-+...
T Consensus 69 -VISHaG~GSIL~~~rl~kplIv~pr~s~y~elvDdHQvela~klae-~~~vv~~s 122 (161)
T COG5017 69 -VISHAGEGSILLLLRLDKPLIVVPRSSQYQELVDDHQVELALKLAE-INYVVACS 122 (161)
T ss_pred -EEeccCcchHHHHhhcCCcEEEEECchhHHHhhhhHHHHHHHHHHh-cCceEEEc
Confidence 999999999999999999999999643 46677888887 66655554
No 76
>cd03821 GT1_Bme6_like This family is most closely related to the GT1 family of glycosyltransferases. Bme6 in Brucella melitensis has been shown to be involved in the biosynthesis of a polysaccharide.
Probab=97.40 E-value=0.0061 Score=58.57 Aligned_cols=80 Identities=18% Similarity=0.160 Sum_probs=56.9
Q ss_pred CCCeEEEecccHH---HHhcccCcceEEec-cC-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCC
Q 045998 276 KDRGLVVKWCSQE---KVLMHAAVSCFLTH-CG-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDG 350 (408)
Q Consensus 276 ~~n~~v~~w~pq~---~lL~h~~v~~fitH-gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 350 (408)
.+++.+.+|+++. .++..+++-++-++ .| -++++||+++|+|+|+-+..+ ....+.+ +.|.....
T Consensus 261 ~~~v~~~g~~~~~~~~~~~~~adv~v~ps~~e~~~~~~~Eama~G~PvI~~~~~~----~~~~~~~--~~~~~~~~---- 330 (375)
T cd03821 261 EDRVTFTGMLYGEDKAAALADADLFVLPSHSENFGIVVAEALACGTPVVTTDKVP----WQELIEY--GCGWVVDD---- 330 (375)
T ss_pred cceEEEcCCCChHHHHHHHhhCCEEEeccccCCCCcHHHHHHhcCCCEEEcCCCC----HHHHhhc--CceEEeCC----
Confidence 4788889999965 45888888333333 12 468999999999999976432 3333442 67776643
Q ss_pred CcCHHHHHHHHHHHhcC
Q 045998 351 TLSIQQVQRCIDEATQG 367 (408)
Q Consensus 351 ~~~~~~l~~~i~~vl~~ 367 (408)
+.+++.++|.+++.+
T Consensus 331 --~~~~~~~~i~~l~~~ 345 (375)
T cd03821 331 --DVDALAAALRRALEL 345 (375)
T ss_pred --ChHHHHHHHHHHHhC
Confidence 349999999999987
No 77
>PRK09922 UDP-D-galactose:(glucosyl)lipopolysaccharide-1,6-D-galactosyltransferase; Provisional
Probab=97.38 E-value=0.0079 Score=58.83 Aligned_cols=163 Identities=15% Similarity=0.162 Sum_probs=94.9
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCCCE-EEEEecCCcccccccchhhhh--hcCCCeEEEecccH--H---HHhcc
Q 045998 222 VIYISFGSLLVLSQNQIDSIAAALINTKRPF-LWVIRSQENKEGGVLRAGFLE--ETKDRGLVVKWCSQ--E---KVLMH 293 (408)
Q Consensus 222 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~-iw~~~~~~~~~~~~lp~~~~~--~~~~n~~v~~w~pq--~---~lL~h 293 (408)
.+++..|....-....+..+++++.+....+ ++.+|.+... ..+ +...+ ..++++.+.+|.++ . ..++.
T Consensus 181 ~~i~~~Grl~~~~~k~~~~l~~a~~~~~~~~~l~ivG~g~~~--~~l-~~~~~~~~l~~~v~f~G~~~~~~~~~~~~~~~ 257 (359)
T PRK09922 181 AVFLYVGRLKFEGQKNVKELFDGLSQTTGEWQLHIIGDGSDF--EKC-KAYSRELGIEQRIIWHGWQSQPWEVVQQKIKN 257 (359)
T ss_pred cEEEEEEEEecccCcCHHHHHHHHHhhCCCeEEEEEeCCccH--HHH-HHHHHHcCCCCeEEEecccCCcHHHHHHHHhc
Confidence 4566777754222233556667776643232 3344544221 012 11222 23578889998753 3 34556
Q ss_pred cCcceEEec----cCcchHHHHHHcCCceeecc-CCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 294 AAVSCFLTH----CGWNSTLETVAAGVPVIAYP-EWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 294 ~~v~~fitH----gG~~s~~eal~~GvP~i~~P-~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
+++ ||.. |--.+++||+++|+|+|+.- ..+ ....+++ -..|..+. .-+.+++.++|.+++.++
T Consensus 258 ~d~--~v~~s~~Egf~~~~lEAma~G~Pvv~s~~~~g----~~eiv~~-~~~G~lv~-----~~d~~~la~~i~~l~~~~ 325 (359)
T PRK09922 258 VSA--LLLTSKFEGFPMTLLEAMSYGIPCISSDCMSG----PRDIIKP-GLNGELYT-----PGNIDEFVGKLNKVISGE 325 (359)
T ss_pred CcE--EEECCcccCcChHHHHHHHcCCCEEEeCCCCC----hHHHccC-CCceEEEC-----CCCHHHHHHHHHHHHhCc
Confidence 777 5543 22568999999999999975 332 2234554 45787774 348899999999999885
Q ss_pred c---HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhC
Q 045998 369 N---ATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEITRK 408 (408)
Q Consensus 369 ~---~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 408 (408)
+ ...++++++++.+.. ..+.+...+..+.+|
T Consensus 326 ~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~ 359 (359)
T PRK09922 326 VKYQHDAIPNSIERFYEVL---------YFKNLNNALFSKLQK 359 (359)
T ss_pred ccCCHHHHHHHHHHhhHHH---------HHHHHHHHHHHHhcC
Confidence 3 233444444444422 345566666666554
No 78
>cd04962 GT1_like_5 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=97.36 E-value=0.0091 Score=58.14 Aligned_cols=80 Identities=19% Similarity=0.143 Sum_probs=58.5
Q ss_pred CCCeEEEecccHH-HHhcccCcceEEec----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCC
Q 045998 276 KDRGLVVKWCSQE-KVLMHAAVSCFLTH----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDG 350 (408)
Q Consensus 276 ~~n~~v~~w~pq~-~lL~h~~v~~fitH----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 350 (408)
.+++.+.++.++. .+++.+++ +|.- |.-.+++||+++|+|+|+.... ..+..+.+ -..|..++.
T Consensus 252 ~~~v~~~g~~~~~~~~~~~~d~--~v~ps~~E~~~~~~~EAma~g~PvI~s~~~----~~~e~i~~-~~~G~~~~~---- 320 (371)
T cd04962 252 QDDVLFLGKQDHVEELLSIADL--FLLPSEKESFGLAALEAMACGVPVVASNAG----GIPEVVKH-GETGFLVDV---- 320 (371)
T ss_pred CceEEEecCcccHHHHHHhcCE--EEeCCCcCCCccHHHHHHHcCCCEEEeCCC----CchhhhcC-CCceEEcCC----
Confidence 4678888877654 68999998 5522 3345999999999999996543 34555655 457776643
Q ss_pred CcCHHHHHHHHHHHhcC
Q 045998 351 TLSIQQVQRCIDEATQG 367 (408)
Q Consensus 351 ~~~~~~l~~~i~~vl~~ 367 (408)
-+.+++.+++.+++.+
T Consensus 321 -~~~~~l~~~i~~l~~~ 336 (371)
T cd04962 321 -GDVEAMAEYALSLLED 336 (371)
T ss_pred -CCHHHHHHHHHHHHhC
Confidence 3679999999999987
No 79
>cd03825 GT1_wcfI_like This family is most closely related to the GT1 family of glycosyltransferases. wcfI in Bacteroides fragilis has been shown to be involved in the capsular polysaccharide biosynthesis.
Probab=97.35 E-value=0.022 Score=55.12 Aligned_cols=81 Identities=16% Similarity=0.090 Sum_probs=59.2
Q ss_pred cCCCeEEEeccc-HH---HHhcccCcceEEeccC----cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeec
Q 045998 275 TKDRGLVVKWCS-QE---KVLMHAAVSCFLTHCG----WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRN 346 (408)
Q Consensus 275 ~~~n~~v~~w~p-q~---~lL~h~~v~~fitHgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 346 (408)
...++...+|++ +. .+++.+++ ++.... -++++||+++|+|+|+.... .....+.+ .+.|..+.
T Consensus 242 ~~~~v~~~g~~~~~~~~~~~~~~ad~--~l~ps~~e~~g~~~~Eam~~g~PvI~~~~~----~~~e~~~~-~~~g~~~~- 313 (365)
T cd03825 242 LPFPVHYLGSLNDDESLALIYSAADV--FVVPSLQENFPNTAIEALACGTPVVAFDVG----GIPDIVDH-GVTGYLAK- 313 (365)
T ss_pred CCCceEecCCcCCHHHHHHHHHhCCE--EEeccccccccHHHHHHHhcCCCEEEecCC----CChhheeC-CCceEEeC-
Confidence 346788889998 44 56889998 776543 47899999999999986543 22233444 45777764
Q ss_pred CCCCCcCHHHHHHHHHHHhcC
Q 045998 347 EEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 347 ~~~~~~~~~~l~~~i~~vl~~ 367 (408)
..+.+++.+++.+++.+
T Consensus 314 ----~~~~~~~~~~l~~l~~~ 330 (365)
T cd03825 314 ----PGDPEDLAEGIEWLLAD 330 (365)
T ss_pred ----CCCHHHHHHHHHHHHhC
Confidence 34789999999999987
No 80
>cd03808 GT1_cap1E_like This family is most closely related to the GT1 family of glycosyltransferases. cap1E in Streptococcus pneumoniae is required for the synthesis of type 1 capsular polysaccharides.
Probab=97.31 E-value=0.014 Score=55.60 Aligned_cols=134 Identities=16% Similarity=0.147 Sum_probs=80.6
Q ss_pred CCceEEEecCCccc-CCHHHHHHHHHHHHh--CCCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccH-HHHhc
Q 045998 219 PSSVIYISFGSLLV-LSQNQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQ-EKVLM 292 (408)
Q Consensus 219 ~~~vvyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq-~~lL~ 292 (408)
++..+++..|+... -..+.+.+.+..+.+ .+.++++ +|...... ......... ...++.+.++..+ ..++.
T Consensus 186 ~~~~~i~~~G~~~~~k~~~~li~~~~~l~~~~~~~~l~i-~G~~~~~~--~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~ 262 (359)
T cd03808 186 EDDPVFLFVARLLKDKGIDELLEAARILKAKGPNVRLLL-VGDGDEEN--PAAILEIEKLGLEGRVEFLGFRDDVPELLA 262 (359)
T ss_pred CCCcEEEEEeccccccCHHHHHHHHHHHHhcCCCeEEEE-EcCCCcch--hhHHHHHHhcCCcceEEEeeccccHHHHHH
Confidence 34567888888663 233444444455543 2344443 44432210 110000111 2367777776443 37899
Q ss_pred ccCcceEEeccC----cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 293 HAAVSCFLTHCG----WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 293 h~~v~~fitHgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
.+++ +|.... -++++||+++|+|+|+-+..+ +...+.+ .+.|..+. .-+.+++.+++.+++.+
T Consensus 263 ~adi--~i~ps~~e~~~~~~~Ea~~~G~Pvi~s~~~~----~~~~i~~-~~~g~~~~-----~~~~~~~~~~i~~l~~~ 329 (359)
T cd03808 263 AADV--FVLPSYREGLPRVLLEAMAMGRPVIATDVPG----CREAVID-GVNGFLVP-----PGDAEALADAIERLIED 329 (359)
T ss_pred hccE--EEecCcccCcchHHHHHHHcCCCEEEecCCC----chhhhhc-CcceEEEC-----CCCHHHHHHHHHHHHhC
Confidence 9998 665432 568999999999999965443 3455554 56787774 34689999999999887
No 81
>cd03799 GT1_amsK_like This is a family of GT1 glycosyltransferases found specifically in certain bacteria. amsK in Erwinia amylovora, has been reported to be involved in the biosynthesis of amylovoran, a exopolysaccharide acting as a virulence factor.
Probab=97.28 E-value=0.012 Score=56.76 Aligned_cols=134 Identities=19% Similarity=0.134 Sum_probs=79.6
Q ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHhC--CCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccHH---HHh
Q 045998 220 SSVIYISFGSLLV-LSQNQIDSIAAALINT--KRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQE---KVL 291 (408)
Q Consensus 220 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq~---~lL 291 (408)
+++.++.+|+... -..+.+...+..+.+. +.++++. |..... ..+ ..+.++ .++|+.+.+++|+. .++
T Consensus 178 ~~~~i~~~g~~~~~k~~~~l~~~~~~l~~~~~~~~l~i~-G~~~~~--~~~-~~~~~~~~~~~~v~~~g~~~~~~l~~~~ 253 (355)
T cd03799 178 EPLRILSVGRLVEKKGLDYLLEALALLKDRGIDFRLDIV-GDGPLR--DEL-EALIAELGLEDRVTLLGAKSQEEVRELL 253 (355)
T ss_pred CCeEEEEEeeeccccCHHHHHHHHHHHhhcCCCeEEEEE-ECCccH--HHH-HHHHHHcCCCCeEEECCcCChHHHHHHH
Confidence 3456677787652 1233444444444443 3333333 332211 011 111122 35788999999865 577
Q ss_pred cccCcceEEec--------cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHH
Q 045998 292 MHAAVSCFLTH--------CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDE 363 (408)
Q Consensus 292 ~h~~v~~fitH--------gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ 363 (408)
+++++.++-+. |.-++++||+++|+|+|+.+..+ ....+.+ ...|..+.. -+.+++.++|.+
T Consensus 254 ~~adi~l~~s~~~~~~~~e~~~~~~~Ea~a~G~Pvi~~~~~~----~~~~i~~-~~~g~~~~~-----~~~~~l~~~i~~ 323 (355)
T cd03799 254 RAADLFVLPSVTAADGDREGLPVVLMEAMAMGLPVISTDVSG----IPELVED-GETGLLVPP-----GDPEALADAIER 323 (355)
T ss_pred HhCCEEEecceecCCCCccCccHHHHHHHHcCCCEEecCCCC----cchhhhC-CCceEEeCC-----CCHHHHHHHHHH
Confidence 88998333222 23468999999999999976532 2234444 447877753 378999999999
Q ss_pred HhcC
Q 045998 364 ATQG 367 (408)
Q Consensus 364 vl~~ 367 (408)
++.+
T Consensus 324 ~~~~ 327 (355)
T cd03799 324 LLDD 327 (355)
T ss_pred HHhC
Confidence 9987
No 82
>PLN02871 UDP-sulfoquinovose:DAG sulfoquinovosyltransferase
Probab=97.26 E-value=0.02 Score=58.19 Aligned_cols=126 Identities=12% Similarity=0.118 Sum_probs=79.3
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhC-CCCEEEEEecCCcccccccchhhhhhc-CCCeEEEecccHH---HHhcccCc
Q 045998 222 VIYISFGSLLVLSQNQIDSIAAALINT-KRPFLWVIRSQENKEGGVLRAGFLEET-KDRGLVVKWCSQE---KVLMHAAV 296 (408)
Q Consensus 222 vvyvs~GS~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~lp~~~~~~~-~~n~~v~~w~pq~---~lL~h~~v 296 (408)
.+++..|+.. ...-+..++++++.. +.+++ .+|.+... +.+.+.. ..|+.+.+++++. .+++.+++
T Consensus 264 ~~i~~vGrl~--~~K~~~~li~a~~~~~~~~l~-ivG~G~~~------~~l~~~~~~~~V~f~G~v~~~ev~~~~~~aDv 334 (465)
T PLN02871 264 PLIVYVGRLG--AEKNLDFLKRVMERLPGARLA-FVGDGPYR------EELEKMFAGTPTVFTGMLQGDELSQAYASGDV 334 (465)
T ss_pred eEEEEeCCCc--hhhhHHHHHHHHHhCCCcEEE-EEeCChHH------HHHHHHhccCCeEEeccCCHHHHHHHHHHCCE
Confidence 4455567765 233355677777765 44544 45543211 2222211 3578888999865 47889999
Q ss_pred ceEEeccC----cchHHHHHHcCCceeeccCCCChhhhHHhhhc--eeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 297 SCFLTHCG----WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVD--VFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 297 ~~fitHgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~--~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
||.-.. -++++||+++|+|+|+....+ ....+.+ .-+.|..+.. -+.+++.++|.+++++
T Consensus 335 --~V~pS~~E~~g~~vlEAmA~G~PVI~s~~gg----~~eiv~~~~~~~~G~lv~~-----~d~~~la~~i~~ll~~ 400 (465)
T PLN02871 335 --FVMPSESETLGFVVLEAMASGVPVVAARAGG----IPDIIPPDQEGKTGFLYTP-----GDVDDCVEKLETLLAD 400 (465)
T ss_pred --EEECCcccccCcHHHHHHHcCCCEEEcCCCC----cHhhhhcCCCCCceEEeCC-----CCHHHHHHHHHHHHhC
Confidence 775433 346899999999999876532 1122221 1467888753 3679999999999987
No 83
>TIGR02149 glgA_Coryne glycogen synthase, Corynebacterium family. This model describes Corynebacterium glutamicum GlgA and closely related proteins in several other species. This enzyme is required for glycogen biosynthesis and appears to replace the distantly related TIGR02095 family of ADP-glucose type glycogen synthase in Corynebacterium glutamicum, Mycobacterium tuberculosis, Bifidobacterium longum, and Streptomyces coelicolor.
Probab=97.22 E-value=0.012 Score=57.85 Aligned_cols=131 Identities=15% Similarity=0.142 Sum_probs=76.6
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhC--CCCEEEEEecCCcccccccchhhhh---hc---CCCeEEE-ecccHH---H
Q 045998 222 VIYISFGSLLVLSQNQIDSIAAALINT--KRPFLWVIRSQENKEGGVLRAGFLE---ET---KDRGLVV-KWCSQE---K 289 (408)
Q Consensus 222 vvyvs~GS~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~lp~~~~~---~~---~~n~~v~-~w~pq~---~ 289 (408)
.+++..|.... ..-+..+++++... +.++++..+..+.. .+-+.+.+ .. .+++... +++++. .
T Consensus 202 ~~i~~~Grl~~--~Kg~~~li~a~~~l~~~~~l~i~g~g~~~~---~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~ 276 (388)
T TIGR02149 202 PYILFVGRITR--QKGVPHLLDAVHYIPKDVQVVLCAGAPDTP---EVAEEVRQAVALLDRNRTGIIWINKMLPKEELVE 276 (388)
T ss_pred eEEEEEccccc--ccCHHHHHHHHHHHhhcCcEEEEeCCCCcH---HHHHHHHHHHHHhccccCceEEecCCCCHHHHHH
Confidence 45566677652 22345555666553 45655554433221 11111211 11 1234443 677755 5
Q ss_pred HhcccCcceEEec----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCc----CHHHHHHHH
Q 045998 290 VLMHAAVSCFLTH----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTL----SIQQVQRCI 361 (408)
Q Consensus 290 lL~h~~v~~fitH----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~----~~~~l~~~i 361 (408)
++.++++ ||.- +.-.+++||+++|+|+|+-... .....+.+ -+.|..++. +.. ..+++.++|
T Consensus 277 ~~~~aDv--~v~ps~~e~~g~~~lEA~a~G~PvI~s~~~----~~~e~i~~-~~~G~~~~~---~~~~~~~~~~~l~~~i 346 (388)
T TIGR02149 277 LLSNAEV--FVCPSIYEPLGIVNLEAMACGTPVVASATG----GIPEVVVD-GETGFLVPP---DNSDADGFQAELAKAI 346 (388)
T ss_pred HHHhCCE--EEeCCccCCCChHHHHHHHcCCCEEEeCCC----CHHHHhhC-CCceEEcCC---CCCcccchHHHHHHHH
Confidence 6889998 6642 2235779999999999997543 34455655 567888864 222 128999999
Q ss_pred HHHhcC
Q 045998 362 DEATQG 367 (408)
Q Consensus 362 ~~vl~~ 367 (408)
.+++.+
T Consensus 347 ~~l~~~ 352 (388)
T TIGR02149 347 NILLAD 352 (388)
T ss_pred HHHHhC
Confidence 999987
No 84
>PRK10307 putative glycosyl transferase; Provisional
Probab=97.22 E-value=0.012 Score=58.63 Aligned_cols=81 Identities=17% Similarity=0.157 Sum_probs=57.5
Q ss_pred CCeEEEecccHH---HHhcccCcceEEeccCc------chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecC
Q 045998 277 DRGLVVKWCSQE---KVLMHAAVSCFLTHCGW------NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNE 347 (408)
Q Consensus 277 ~n~~v~~w~pq~---~lL~h~~v~~fitHgG~------~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 347 (408)
+|+.+.+|+|+. .+++.+++..+.+..+. +.+.|++++|+|+|+....+.... ..+. +.|+.+.
T Consensus 284 ~~v~f~G~~~~~~~~~~~~~aDi~v~ps~~e~~~~~~p~kl~eama~G~PVi~s~~~g~~~~--~~i~---~~G~~~~-- 356 (412)
T PRK10307 284 PNVHFLPLQPYDRLPALLKMADCHLLPQKAGAADLVLPSKLTNMLASGRNVVATAEPGTELG--QLVE---GIGVCVE-- 356 (412)
T ss_pred CceEEeCCCCHHHHHHHHHhcCEeEEeeccCcccccCcHHHHHHHHcCCCEEEEeCCCchHH--HHHh---CCcEEeC--
Confidence 578888999876 47889998655555432 236899999999999875442111 1222 4677774
Q ss_pred CCCCcCHHHHHHHHHHHhcC
Q 045998 348 EDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 348 ~~~~~~~~~l~~~i~~vl~~ 367 (408)
.-+.+++.++|.+++++
T Consensus 357 ---~~d~~~la~~i~~l~~~ 373 (412)
T PRK10307 357 ---PESVEALVAAIAALARQ 373 (412)
T ss_pred ---CCCHHHHHHHHHHHHhC
Confidence 34679999999999877
No 85
>COG3980 spsG Spore coat polysaccharide biosynthesis protein, predicted glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=97.20 E-value=0.0032 Score=57.99 Aligned_cols=143 Identities=15% Similarity=0.084 Sum_probs=105.3
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhh--cCCCeEEEeccc-HHHHhcccCcce
Q 045998 222 VIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCS-QEKVLMHAAVSC 298 (408)
Q Consensus 222 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~p-q~~lL~h~~v~~ 298 (408)
-|+|+||-.- +....-+++..|.+.++.+-.+++..+.. +.....+ ..+|+.+..... ...++..++.
T Consensus 160 ~ilI~lGGsD--pk~lt~kvl~~L~~~~~nl~iV~gs~~p~-----l~~l~k~~~~~~~i~~~~~~~dma~LMke~d~-- 230 (318)
T COG3980 160 DILITLGGSD--PKNLTLKVLAELEQKNVNLHIVVGSSNPT-----LKNLRKRAEKYPNINLYIDTNDMAELMKEADL-- 230 (318)
T ss_pred eEEEEccCCC--hhhhHHHHHHHhhccCeeEEEEecCCCcc-----hhHHHHHHhhCCCeeeEecchhHHHHHHhcch--
Confidence 4899998644 44566778888888887777777744321 2233322 246777665554 4578999998
Q ss_pred EEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 045998 299 FLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAV 378 (408)
Q Consensus 299 fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~ 378 (408)
.|+-+|. |+.|++..|+|.+++|+...|-.-|+..+. +|+-..+.. + ++......-+.+++.| ...|++.-
T Consensus 231 aI~AaGs-tlyEa~~lgvP~l~l~~a~NQ~~~a~~f~~-lg~~~~l~~---~-l~~~~~~~~~~~i~~d---~~~rk~l~ 301 (318)
T COG3980 231 AISAAGS-TLYEALLLGVPSLVLPLAENQIATAKEFEA-LGIIKQLGY---H-LKDLAKDYEILQIQKD---YARRKNLS 301 (318)
T ss_pred heeccch-HHHHHHHhcCCceEEeeeccHHHHHHHHHh-cCchhhccC---C-CchHHHHHHHHHhhhC---HHHhhhhh
Confidence 9998886 899999999999999999999999999998 888777764 3 7777777778888887 56666655
Q ss_pred HHHH
Q 045998 379 AWKE 382 (408)
Q Consensus 379 ~l~~ 382 (408)
..++
T Consensus 302 ~~~~ 305 (318)
T COG3980 302 FGSK 305 (318)
T ss_pred hccc
Confidence 4444
No 86
>COG0381 WecB UDP-N-acetylglucosamine 2-epimerase [Cell envelope biogenesis, outer membrane]
Probab=97.19 E-value=0.062 Score=52.16 Aligned_cols=155 Identities=14% Similarity=0.216 Sum_probs=99.6
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHH----HhC-CCCEEEEEecCCcccccccchhhh-hhcC--CCeEEE---ecccHH
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAAL----INT-KRPFLWVIRSQENKEGGVLRAGFL-EETK--DRGLVV---KWCSQE 288 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al----~~~-~~~~iw~~~~~~~~~~~~lp~~~~-~~~~--~n~~v~---~w~pq~ 288 (408)
+..+.+++=-..+.. +-++.+..++ +.. +..||..+..... + .++. +++. +|+.+. ++.+..
T Consensus 204 ~~~iLvT~HRreN~~-~~~~~i~~al~~i~~~~~~~~viyp~H~~~~-----v-~e~~~~~L~~~~~v~li~pl~~~~f~ 276 (383)
T COG0381 204 KKYILVTAHRRENVG-EPLEEICEALREIAEEYPDVIVIYPVHPRPR-----V-RELVLKRLKNVERVKLIDPLGYLDFH 276 (383)
T ss_pred CcEEEEEcchhhccc-ccHHHHHHHHHHHHHhCCCceEEEeCCCChh-----h-hHHHHHHhCCCCcEEEeCCcchHHHH
Confidence 357888764433332 3444555544 344 5566665554421 1 1121 2333 457776 678888
Q ss_pred HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
.++.++.+ .+|-.|. -.-||-..|+|.+++=...+++. .++ .|.-+.+. .+.+.|.+++.+++++
T Consensus 277 ~L~~~a~~--iltDSGg-iqEEAp~lg~Pvl~lR~~TERPE---~v~--agt~~lvg------~~~~~i~~~~~~ll~~- 341 (383)
T COG0381 277 NLMKNAFL--ILTDSGG-IQEEAPSLGKPVLVLRDTTERPE---GVE--AGTNILVG------TDEENILDAATELLED- 341 (383)
T ss_pred HHHHhceE--EEecCCc-hhhhHHhcCCcEEeeccCCCCcc---cee--cCceEEeC------ccHHHHHHHHHHHhhC-
Confidence 99999988 9998874 46789999999999988888887 333 46665554 4679999999999998
Q ss_pred cHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHH
Q 045998 369 NATQMKKRAVAWKEAAKKALEDGGSSDANINRFI 402 (408)
Q Consensus 369 ~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v 402 (408)
++..+++....--. ++|.+|.+-++-+.
T Consensus 342 --~~~~~~m~~~~npY----gdg~as~rIv~~l~ 369 (383)
T COG0381 342 --EEFYERMSNAKNPY----GDGNASERIVEILL 369 (383)
T ss_pred --hHHHHHHhcccCCC----cCcchHHHHHHHHH
Confidence 56666655555443 45555555444443
No 87
>cd03807 GT1_WbnK_like This family is most closely related to the GT1 family of glycosyltransferases. WbnK in Shigella dysenteriae has been shown to be involved in the type 7 O-antigen biosynthesis.
Probab=97.16 E-value=0.024 Score=54.07 Aligned_cols=78 Identities=23% Similarity=0.239 Sum_probs=54.7
Q ss_pred CCCeEEEeccc-HHHHhcccCcceEEeccC----cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCC
Q 045998 276 KDRGLVVKWCS-QEKVLMHAAVSCFLTHCG----WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDG 350 (408)
Q Consensus 276 ~~n~~v~~w~p-q~~lL~h~~v~~fitHgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 350 (408)
..++.+.+... -..+++.+++ +|..+. -++++||+++|+|+|+-... .+...+.+ .|..+..
T Consensus 250 ~~~v~~~g~~~~~~~~~~~adi--~v~ps~~e~~~~~~~Ea~a~g~PvI~~~~~----~~~e~~~~---~g~~~~~---- 316 (365)
T cd03807 250 EDKVILLGERSDVPALLNALDV--FVLSSLSEGFPNVLLEAMACGLPVVATDVG----DNAELVGD---TGFLVPP---- 316 (365)
T ss_pred CceEEEccccccHHHHHHhCCE--EEeCCccccCCcHHHHHHhcCCCEEEcCCC----ChHHHhhc---CCEEeCC----
Confidence 35666665443 3478999998 776544 37999999999999985433 34444443 4555542
Q ss_pred CcCHHHHHHHHHHHhcC
Q 045998 351 TLSIQQVQRCIDEATQG 367 (408)
Q Consensus 351 ~~~~~~l~~~i~~vl~~ 367 (408)
-+.+++.+++.+++++
T Consensus 317 -~~~~~l~~~i~~l~~~ 332 (365)
T cd03807 317 -GDPEALAEAIEALLAD 332 (365)
T ss_pred -CCHHHHHHHHHHHHhC
Confidence 3689999999999987
No 88
>PF13692 Glyco_trans_1_4: Glycosyl transferases group 1; PDB: 3OY2_A 3OY7_B 2Q6V_A 2HY7_A 3CV3_A 3CUY_A.
Probab=97.14 E-value=0.0034 Score=51.88 Aligned_cols=127 Identities=16% Similarity=0.156 Sum_probs=67.6
Q ss_pred eEEEecCCccc-CCHHHHHH-HHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH-HHhcccCcce
Q 045998 222 VIYISFGSLLV-LSQNQIDS-IAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE-KVLMHAAVSC 298 (408)
Q Consensus 222 vvyvs~GS~~~-~~~~~~~~-~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~-~lL~h~~v~~ 298 (408)
+.++++|+... ...+.+-+ ++..+.+...++-+.+-+.. |+.+.+...+|+.+.+|++.. ++++.++++.
T Consensus 3 ~~i~~~g~~~~~k~~~~li~~~~~~l~~~~p~~~l~i~G~~-------~~~l~~~~~~~v~~~g~~~e~~~~l~~~dv~l 75 (135)
T PF13692_consen 3 LYIGYLGRIRPDKGLEELIEAALERLKEKHPDIELIIIGNG-------PDELKRLRRPNVRFHGFVEELPEILAAADVGL 75 (135)
T ss_dssp EEEE--S-SSGGGTHHHHHH-HHHHHHHHSTTEEEEEECES-------S-HHCCHHHCTEEEE-S-HHHHHHHHC-SEEE
T ss_pred ccccccccccccccccchhhhHHHHHHHHCcCEEEEEEeCC-------HHHHHHhcCCCEEEcCCHHHHHHHHHhCCEEE
Confidence 35566666652 23343333 66666553333443332221 112211124799999998644 6899999977
Q ss_pred EEecc--C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 299 FLTHC--G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 299 fitHg--G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
..+.. | -+.+.|++++|+|+|+.+. .....++. .+.|..+. . +.+++.++++++++|
T Consensus 76 ~p~~~~~~~~~k~~e~~~~G~pvi~~~~-----~~~~~~~~-~~~~~~~~----~--~~~~l~~~i~~l~~d 135 (135)
T PF13692_consen 76 IPSRFNEGFPNKLLEAMAAGKPVIASDN-----GAEGIVEE-DGCGVLVA----N--DPEELAEAIERLLND 135 (135)
T ss_dssp E-BSS-SCC-HHHHHHHCTT--EEEEHH-----HCHCHS----SEEEE-T----T---HHHHHHHHHHHHH-
T ss_pred EEeeCCCcCcHHHHHHHHhCCCEEECCc-----chhhheee-cCCeEEEC----C--CHHHHHHHHHHHhcC
Confidence 66532 2 4899999999999999865 12233443 57777663 2 889999999998864
No 89
>cd03820 GT1_amsD_like This family is most closely related to the GT1 family of glycosyltransferases. AmSD in Erwinia amylovora has been shown to be involved in the biosynthesis of amylovoran, the acidic exopolysaccharide acting as a virulence factor. This enzyme may be responsible for the formation of galactose alpha-1,6 linkages in amylovoran.
Probab=97.11 E-value=0.016 Score=54.95 Aligned_cols=88 Identities=18% Similarity=0.277 Sum_probs=60.4
Q ss_pred CCCeEEEeccc-HHHHhcccCcceEEeccC----cchHHHHHHcCCceeeccCCCChhhhHHhhhceee-eEEEeecCCC
Q 045998 276 KDRGLVVKWCS-QEKVLMHAAVSCFLTHCG----WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFK-IGVRMRNEED 349 (408)
Q Consensus 276 ~~n~~v~~w~p-q~~lL~h~~v~~fitHgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~ 349 (408)
..++.+.++.. -..++..+++ +|.... -++++||+++|+|+|+.+..+.+. .+.+ .+ .|..++
T Consensus 234 ~~~v~~~g~~~~~~~~~~~ad~--~i~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~~~~~----~~~~-~~~~g~~~~---- 302 (348)
T cd03820 234 EDRVILLGFTKNIEEYYAKASI--FVLTSRFEGFPMVLLEAMAFGLPVISFDCPTGPS----EIIE-DGVNGLLVP---- 302 (348)
T ss_pred CCeEEEcCCcchHHHHHHhCCE--EEeCccccccCHHHHHHHHcCCCEEEecCCCchH----hhhc-cCcceEEeC----
Confidence 35677777633 3378899998 665542 468999999999999876554332 2333 34 787774
Q ss_pred CCcCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 045998 350 GTLSIQQVQRCIDEATQGLNATQMKKRAV 378 (408)
Q Consensus 350 ~~~~~~~l~~~i~~vl~~~~~~~~~~~a~ 378 (408)
.-+.+++.++|.+++.+ ++.+++..
T Consensus 303 -~~~~~~~~~~i~~ll~~---~~~~~~~~ 327 (348)
T cd03820 303 -NGDVEALAEALLRLMED---EELRKRMG 327 (348)
T ss_pred -CCCHHHHHHHHHHHHcC---HHHHHHHH
Confidence 34679999999999988 44444333
No 90
>cd04951 GT1_WbdM_like This family is most closely related to the GT1 family of glycosyltransferases and is named after WbdM in Escherichia coli. In general glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have
Probab=97.10 E-value=0.015 Score=56.01 Aligned_cols=88 Identities=16% Similarity=0.102 Sum_probs=59.2
Q ss_pred CCCeEEEecccH-HHHhcccCcceEEeccC----cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCC
Q 045998 276 KDRGLVVKWCSQ-EKVLMHAAVSCFLTHCG----WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDG 350 (408)
Q Consensus 276 ~~n~~v~~w~pq-~~lL~h~~v~~fitHgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 350 (408)
.+|+.+.++..+ ..++..+++ ||.-.. -++++||+++|+|+|+. |...+...+.+ .|. .+.
T Consensus 244 ~~~v~~~g~~~~~~~~~~~ad~--~v~~s~~e~~~~~~~Ea~a~G~PvI~~----~~~~~~e~i~~-~g~--~~~----- 309 (360)
T cd04951 244 SNRVKLLGLRDDIAAYYNAADL--FVLSSAWEGFGLVVAEAMACELPVVAT----DAGGVREVVGD-SGL--IVP----- 309 (360)
T ss_pred CCcEEEecccccHHHHHHhhce--EEecccccCCChHHHHHHHcCCCEEEe----cCCChhhEecC-Cce--EeC-----
Confidence 467888877654 478999998 554332 46889999999999985 44445555655 444 443
Q ss_pred CcCHHHHHHHHHHHhcCCcHHHHHHHHHH
Q 045998 351 TLSIQQVQRCIDEATQGLNATQMKKRAVA 379 (408)
Q Consensus 351 ~~~~~~l~~~i~~vl~~~~~~~~~~~a~~ 379 (408)
.-+.+++.+++.+++.+. +.+++...+
T Consensus 310 ~~~~~~~~~~i~~ll~~~--~~~~~~~~~ 336 (360)
T cd04951 310 ISDPEALANKIDEILKMS--GEERDIIGA 336 (360)
T ss_pred CCCHHHHHHHHHHHHhCC--HHHHHHHHH
Confidence 247789999999998532 445544433
No 91
>TIGR03088 stp2 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.98 E-value=0.033 Score=54.54 Aligned_cols=80 Identities=16% Similarity=0.123 Sum_probs=57.0
Q ss_pred CCCeEEEeccc-HHHHhcccCcceEE--ec--cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCC
Q 045998 276 KDRGLVVKWCS-QEKVLMHAAVSCFL--TH--CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDG 350 (408)
Q Consensus 276 ~~n~~v~~w~p-q~~lL~h~~v~~fi--tH--gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 350 (408)
..++.+.++.. -..+++.+++ || ++ |--++++||+++|+|+|+-...+ +...+.+ -..|..+.
T Consensus 254 ~~~v~~~g~~~~~~~~~~~adi--~v~pS~~Eg~~~~~lEAma~G~Pvv~s~~~g----~~e~i~~-~~~g~~~~----- 321 (374)
T TIGR03088 254 AHLVWLPGERDDVPALMQALDL--FVLPSLAEGISNTILEAMASGLPVIATAVGG----NPELVQH-GVTGALVP----- 321 (374)
T ss_pred cceEEEcCCcCCHHHHHHhcCE--EEeccccccCchHHHHHHHcCCCEEEcCCCC----cHHHhcC-CCceEEeC-----
Confidence 35566666543 3478999999 65 33 33568999999999999976533 4445554 45677774
Q ss_pred CcCHHHHHHHHHHHhcC
Q 045998 351 TLSIQQVQRCIDEATQG 367 (408)
Q Consensus 351 ~~~~~~l~~~i~~vl~~ 367 (408)
.-+.+++.+++.+++++
T Consensus 322 ~~d~~~la~~i~~l~~~ 338 (374)
T TIGR03088 322 PGDAVALARALQPYVSD 338 (374)
T ss_pred CCCHHHHHHHHHHHHhC
Confidence 34678999999999987
No 92
>cd03816 GT1_ALG1_like This family is most closely related to the GT1 family of glycosyltransferases. The yeast gene ALG1 has been shown to function as a mannosyltransferase that catalyzes the formation of dolichol pyrophosphate (Dol-PP)-GlcNAc2Man from GDP-Man and Dol-PP-Glc-NAc2, and participates in the formation of the lipid-linked precursor oligosaccharide for N-glycosylation. In humans ALG1 has been associated with the congenital disorders of glycosylation (CDG) designated as subtype CDG-Ik.
Probab=96.94 E-value=0.018 Score=57.64 Aligned_cols=91 Identities=20% Similarity=0.237 Sum_probs=62.5
Q ss_pred CCeEEE-ecccHH---HHhcccCcceEEe-c---cC---cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEee
Q 045998 277 DRGLVV-KWCSQE---KVLMHAAVSCFLT-H---CG---WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMR 345 (408)
Q Consensus 277 ~n~~v~-~w~pq~---~lL~h~~v~~fit-H---gG---~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 345 (408)
+|+... +|+|.. .+|+.+++ ++. + -| -+.++||+++|+|+|+.... .....+++ -+.|+.+
T Consensus 294 ~~~~~~~g~~~~~~~~~~l~~aDv--~v~~~~~~~~~~~p~~~~Eama~G~PVI~s~~~----~~~eiv~~-~~~G~lv- 365 (415)
T cd03816 294 KKVTIRTPWLSAEDYPKLLASADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCALDFK----CIDELVKH-GENGLVF- 365 (415)
T ss_pred CcEEEEcCcCCHHHHHHHHHhCCE--EEEccccccccCCcHHHHHHHHcCCCEEEeCCC----CHHHHhcC-CCCEEEE-
Confidence 455544 688866 45889999 553 1 12 34699999999999996532 34456665 6788876
Q ss_pred cCCCCCcCHHHHHHHHHHHhcC---C-cHHHHHHHHHHHH
Q 045998 346 NEEDGTLSIQQVQRCIDEATQG---L-NATQMKKRAVAWK 381 (408)
Q Consensus 346 ~~~~~~~~~~~l~~~i~~vl~~---~-~~~~~~~~a~~l~ 381 (408)
+ +.+++.++|.+++++ + ....+.+++++.+
T Consensus 366 ----~--d~~~la~~i~~ll~~~~~~~~~~~m~~~~~~~~ 399 (415)
T cd03816 366 ----G--DSEELAEQLIDLLSNFPNRGKLNSLKKGAQEES 399 (415)
T ss_pred ----C--CHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHhh
Confidence 2 579999999999987 2 2345555555544
No 93
>TIGR03087 stp1 sugar transferase, PEP-CTERM/EpsH1 system associated. Members of this family include a match to the pfam00534 Glycosyl transferases group 1 domain. Nearly all are found in species that encode the PEP-CTERM/exosortase system predicted to act in protein sorting in a number of Gram-negative bacteria. In particular, these transferases are found proximal to a particular variant of exosortase, EpsH1, which appears to travel with a conserved group of genes summarized by Genome Property GenProp0652. The nature of the sugar transferase reaction catalyzed by members of this clade is unknown and may conceivably be variable with respect to substrate by species, but we hypothesize a conserved substrate.
Probab=96.83 E-value=0.065 Score=53.13 Aligned_cols=80 Identities=21% Similarity=0.094 Sum_probs=57.3
Q ss_pred CCCeEEEecccHH-HHhcccCcceEEec--cCc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCC
Q 045998 276 KDRGLVVKWCSQE-KVLMHAAVSCFLTH--CGW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGT 351 (408)
Q Consensus 276 ~~n~~v~~w~pq~-~lL~h~~v~~fitH--gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 351 (408)
..++.+.+++++. .+++++++.++-++ .|. +.++||+++|+|+|+-+...+.. ... .|.|+.+.
T Consensus 279 ~~~V~~~G~v~~~~~~~~~adv~v~Ps~~~eG~~~~~lEAma~G~PVV~t~~~~~~i-----~~~-~~~g~lv~------ 346 (397)
T TIGR03087 279 LPGVTVTGSVADVRPYLAHAAVAVAPLRIARGIQNKVLEAMAMAKPVVASPEAAEGI-----DAL-PGAELLVA------ 346 (397)
T ss_pred CCCeEEeeecCCHHHHHHhCCEEEecccccCCcccHHHHHHHcCCCEEecCcccccc-----ccc-CCcceEeC------
Confidence 3678888998864 68899999332243 354 36999999999999987543221 122 46676663
Q ss_pred cCHHHHHHHHHHHhcC
Q 045998 352 LSIQQVQRCIDEATQG 367 (408)
Q Consensus 352 ~~~~~l~~~i~~vl~~ 367 (408)
-+.+++.++|.+++.+
T Consensus 347 ~~~~~la~ai~~ll~~ 362 (397)
T TIGR03087 347 ADPADFAAAILALLAN 362 (397)
T ss_pred CCHHHHHHHHHHHHcC
Confidence 3689999999999987
No 94
>PF04007 DUF354: Protein of unknown function (DUF354); InterPro: IPR007152 Members of this family are around 350 amino acids in length. They are found in archaea and some bacteria and have no known function.
Probab=96.82 E-value=0.15 Score=49.29 Aligned_cols=126 Identities=13% Similarity=0.118 Sum_probs=75.7
Q ss_pred CCceEEEecCCcc----cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEE-ecccHHHHhcc
Q 045998 219 PSSVIYISFGSLL----VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVV-KWCSQEKVLMH 293 (408)
Q Consensus 219 ~~~vvyvs~GS~~----~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~-~w~pq~~lL~h 293 (408)
+.+.|+|-+-+.. ......+.++++.|++.+..++..-+..+.. .+ + ++. ++.+. .-+.-.++|.+
T Consensus 178 ~~~yIvvR~~~~~A~y~~~~~~i~~~ii~~L~~~~~~vV~ipr~~~~~---~~---~-~~~--~~~i~~~~vd~~~Ll~~ 248 (335)
T PF04007_consen 178 DEPYIVVRPEAWKASYDNGKKSILPEIIEELEKYGRNVVIIPRYEDQR---EL---F-EKY--GVIIPPEPVDGLDLLYY 248 (335)
T ss_pred CCCEEEEEeccccCeeecCccchHHHHHHHHHhhCceEEEecCCcchh---hH---H-hcc--CccccCCCCCHHHHHHh
Confidence 3456777665533 2344567788999998887655544433221 11 1 111 23333 44556689999
Q ss_pred cCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHh
Q 045998 294 AAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 294 ~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl 365 (408)
+++ +|+-|| ....||...|+|.|-+ +-++-...-+.+.+ .|. .. ..-+.+++.+.|++.+
T Consensus 249 a~l--~Ig~gg-TMa~EAA~LGtPaIs~-~~g~~~~vd~~L~~-~Gl--l~-----~~~~~~ei~~~v~~~~ 308 (335)
T PF04007_consen 249 ADL--VIGGGG-TMAREAALLGTPAISC-FPGKLLAVDKYLIE-KGL--LY-----HSTDPDEIVEYVRKNL 308 (335)
T ss_pred cCE--EEeCCc-HHHHHHHHhCCCEEEe-cCCcchhHHHHHHH-CCC--eE-----ecCCHHHHHHHHHHhh
Confidence 999 999887 6788999999999985 22332223344555 565 22 2346667766665544
No 95
>cd03819 GT1_WavL_like This family is most closely related to the GT1 family of glycosyltransferases. WavL in Vibrio cholerae has been shown to be involved in the biosynthesis of the lipopolysaccharide core.
Probab=96.81 E-value=0.035 Score=53.54 Aligned_cols=135 Identities=16% Similarity=0.169 Sum_probs=78.8
Q ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHhCCCCE-EEEEecCCcccccccchhh---hh--hcCCCeEEEecccH-HHHh
Q 045998 220 SSVIYISFGSLLV-LSQNQIDSIAAALINTKRPF-LWVIRSQENKEGGVLRAGF---LE--ETKDRGLVVKWCSQ-EKVL 291 (408)
Q Consensus 220 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~-iw~~~~~~~~~~~~lp~~~---~~--~~~~n~~v~~w~pq-~~lL 291 (408)
+..+++..|.... -..+.+.+.+..+.+.+..+ ++.+|...... .+.+.+ .. ...+++.+.+|.+. ..+|
T Consensus 184 ~~~~i~~~Gr~~~~Kg~~~li~~~~~l~~~~~~~~l~ivG~~~~~~--~~~~~~~~~~~~~~~~~~v~~~g~~~~~~~~l 261 (355)
T cd03819 184 GKPVILLPGRLTRWKGQEVFIEALARLKKDDPDVHLLIVGDAQGRR--FYYAELLELIKRLGLQDRVTFVGHCSDMPAAY 261 (355)
T ss_pred CceEEEEeeccccccCHHHHHHHHHHHHhcCCCeEEEEEECCcccc--hHHHHHHHHHHHcCCcceEEEcCCcccHHHHH
Confidence 3456777777663 23455555555565533333 33344432110 111111 11 22467888888543 3688
Q ss_pred cccCcceEEec--cC-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 292 MHAAVSCFLTH--CG-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 292 ~h~~v~~fitH--gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
..+++..+-++ -| -++++||+++|+|+|+....+ ....+.+ -+.|..+. .-+.+++.++|.+++.
T Consensus 262 ~~ad~~i~ps~~~e~~~~~l~EA~a~G~PvI~~~~~~----~~e~i~~-~~~g~~~~-----~~~~~~l~~~i~~~~~ 329 (355)
T cd03819 262 ALADIVVSASTEPEAFGRTAVEAQAMGRPVIASDHGG----ARETVRP-GETGLLVP-----PGDAEALAQALDQILS 329 (355)
T ss_pred HhCCEEEecCCCCCCCchHHHHHHhcCCCEEEcCCCC----cHHHHhC-CCceEEeC-----CCCHHHHHHHHHHHHh
Confidence 99998444342 23 359999999999999875432 3445554 45788774 3488899999976654
No 96
>COG3914 Spy Predicted O-linked N-acetylglucosamine transferase, SPINDLY family [Posttranslational modification, protein turnover, chaperones]
Probab=96.81 E-value=0.022 Score=57.50 Aligned_cols=133 Identities=14% Similarity=0.186 Sum_probs=91.2
Q ss_pred CCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhh---hhh--c-CCCeEEEecccHH---
Q 045998 218 PPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGF---LEE--T-KDRGLVVKWCSQE--- 288 (408)
Q Consensus 218 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~---~~~--~-~~n~~v~~w~pq~--- 288 (408)
|++-+||+||+...+..++.+..-++-|...+-.++|..+.++.. ..-..+ .++ + +++.++.+-.|..
T Consensus 427 p~~avVf~c~~n~~K~~pev~~~wmqIL~~vP~Svl~L~~~~~~~---~~~~~l~~la~~~Gv~~eRL~f~p~~~~~~h~ 503 (620)
T COG3914 427 PEDAVVFCCFNNYFKITPEVFALWMQILSAVPNSVLLLKAGGDDA---EINARLRDLAEREGVDSERLRFLPPAPNEDHR 503 (620)
T ss_pred CCCeEEEEecCCcccCCHHHHHHHHHHHHhCCCcEEEEecCCCcH---HHHHHHHHHHHHcCCChhheeecCCCCCHHHH
Confidence 466799999999999999999999999999999999998875332 111111 111 1 3666666655543
Q ss_pred HHhcccCcceEEe---ccCcchHHHHHHcCCceeeccCCCChhh--hHHhhhceeeeEEEeecCCCCCcCHHHHHHHHH
Q 045998 289 KVLMHAAVSCFLT---HCGWNSTLETVAAGVPVIAYPEWTDQPT--DAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCID 362 (408)
Q Consensus 289 ~lL~h~~v~~fit---HgG~~s~~eal~~GvP~i~~P~~~DQ~~--na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~ 362 (408)
+=+.-+++ |+. -||..|..|++..|||+|.++ ++||. |+.-+....|+--.+- .-..+=++++|+
T Consensus 504 a~~~iADl--vLDTyPY~g~TTa~daLwm~vPVlT~~--G~~FasR~~~si~~~agi~e~vA-----~s~~dYV~~av~ 573 (620)
T COG3914 504 ARYGIADL--VLDTYPYGGHTTASDALWMGVPVLTRV--GEQFASRNGASIATNAGIPELVA-----DSRADYVEKAVA 573 (620)
T ss_pred Hhhchhhe--eeecccCCCccchHHHHHhcCceeeec--cHHHHHhhhHHHHHhcCCchhhc-----CCHHHHHHHHHH
Confidence 45556777 664 699999999999999999986 78876 4444443245443332 223455666663
No 97
>cd03806 GT1_ALG11_like This family is most closely related to the GT1 family of glycosyltransferases. ALG11 in yeast is involved in adding the final 1,2-linked Man to the Man5GlcNAc2-PP-Dol synthesized on the cytosolic face of the ER. The deletion analysis of ALG11 was shown to block the early steps of core biosynthesis that takes place on the cytoplasmic face of the ER and lead to a defect in the assembly of lipid-linked oligosaccharides.
Probab=96.76 E-value=0.54 Score=47.13 Aligned_cols=80 Identities=20% Similarity=0.141 Sum_probs=55.9
Q ss_pred cCCCeEEEecccHH---HHhcccCcceEEe-----ccCcchHHHHHHcCCceeeccCCCChhhhHHhhh---ceeeeEEE
Q 045998 275 TKDRGLVVKWCSQE---KVLMHAAVSCFLT-----HCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLV---DVFKIGVR 343 (408)
Q Consensus 275 ~~~n~~v~~w~pq~---~lL~h~~v~~fit-----HgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~---~~~g~G~~ 343 (408)
+.+++.+.+++|+. .+|+.+++ +|+ |-| .++.||+++|+|.|+.-..+. ....+. . -..|..
T Consensus 303 l~~~V~f~g~v~~~~l~~~l~~adv--~v~~s~~E~Fg-i~~lEAMa~G~pvIa~~~ggp---~~~iv~~~~~-g~~G~l 375 (419)
T cd03806 303 LEDKVEFVVNAPFEELLEELSTASI--GLHTMWNEHFG-IGVVEYMAAGLIPLAHASGGP---LLDIVVPWDG-GPTGFL 375 (419)
T ss_pred CCCeEEEecCCCHHHHHHHHHhCeE--EEECCccCCcc-cHHHHHHHcCCcEEEEcCCCC---chheeeccCC-CCceEE
Confidence 35789999999876 57888888 553 223 488999999999998654331 112232 2 356765
Q ss_pred eecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 344 MRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 344 l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
. . +.+++.++|.+++++.
T Consensus 376 ~-----~--d~~~la~ai~~ll~~~ 393 (419)
T cd03806 376 A-----S--TAEEYAEAIEKILSLS 393 (419)
T ss_pred e-----C--CHHHHHHHHHHHHhCC
Confidence 4 2 6899999999999863
No 98
>cd03805 GT1_ALG2_like This family is most closely related to the GT1 family of glycosyltransferases. ALG2, a 1,3-mannosyltransferase, in yeast catalyzes the mannosylation of Man(2)GlcNAc(2)-dolichol diphosphate and Man(1)GlcNAc(2)-dolichol diphosphate to form Man(3)GlcNAc(2)-dolichol diphosphate. A deficiency of this enzyme causes an abnormal accumulation of Man1GlcNAc2-PP-dolichol and Man2GlcNAc2-PP-dolichol, which is associated with a type of congenital disorders of glycosylation (CDG), designated CDG-Ii, in humans.
Probab=96.75 E-value=0.046 Score=53.75 Aligned_cols=80 Identities=20% Similarity=0.155 Sum_probs=58.6
Q ss_pred CCCeEEEecccHH---HHhcccCcceEEecc---C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCC
Q 045998 276 KDRGLVVKWCSQE---KVLMHAAVSCFLTHC---G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEE 348 (408)
Q Consensus 276 ~~n~~v~~w~pq~---~lL~h~~v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 348 (408)
.+|+.+.+++|+. .+|..+++ ++... | -.+++||+++|+|+|+.-..+ ....+.+ .+.|..+.
T Consensus 279 ~~~V~f~g~~~~~~~~~~l~~ad~--~l~~s~~E~~g~~~lEAma~G~PvI~s~~~~----~~e~i~~-~~~g~~~~--- 348 (392)
T cd03805 279 EDQVIFLPSISDSQKELLLSSARA--LLYTPSNEHFGIVPLEAMYAGKPVIACNSGG----PLETVVD-GETGFLCE--- 348 (392)
T ss_pred CceEEEeCCCChHHHHHHHhhCeE--EEECCCcCCCCchHHHHHHcCCCEEEECCCC----cHHHhcc-CCceEEeC---
Confidence 4789999999986 56888888 65322 2 357899999999999975433 3344554 56777763
Q ss_pred CCCcCHHHHHHHHHHHhcCC
Q 045998 349 DGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 349 ~~~~~~~~l~~~i~~vl~~~ 368 (408)
. +.+++.++|.++++++
T Consensus 349 --~-~~~~~a~~i~~l~~~~ 365 (392)
T cd03805 349 --P-TPEEFAEAMLKLANDP 365 (392)
T ss_pred --C-CHHHHHHHHHHHHhCh
Confidence 2 6899999999999873
No 99
>cd03796 GT1_PIG-A_like This family is most closely related to the GT1 family of glycosyltransferases. Phosphatidylinositol glycan-class A (PIG-A), an X-linked gene in humans, is necessary for the synthesis of N-acetylglucosaminyl-phosphatidylinositol, a very early intermediate in glycosyl phosphatidylinositol (GPI)-anchor biosynthesis. The GPI-anchor is an important cellular structure that facilitates the attachment of many proteins to cell surfaces. Somatic mutations in PIG-A have been associated with Paroxysmal Nocturnal Hemoglobinuria (PNH), an acquired hematological disorder.
Probab=96.75 E-value=0.072 Score=52.84 Aligned_cols=130 Identities=15% Similarity=0.199 Sum_probs=75.1
Q ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHh--CCCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccHH---HHh
Q 045998 220 SSVIYISFGSLLV-LSQNQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQE---KVL 291 (408)
Q Consensus 220 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq~---~lL 291 (408)
+..+++..|.... -..+.+.+.+..+.+ .+.++++ +|..... ..+ ....++ +.+++.+.+|+|+. .++
T Consensus 192 ~~~~i~~~grl~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~~~--~~l-~~~~~~~~l~~~v~~~G~~~~~~~~~~l 267 (398)
T cd03796 192 DKITIVVISRLVYRKGIDLLVGIIPEICKKHPNVRFII-GGDGPKR--ILL-EEMREKYNLQDRVELLGAVPHERVRDVL 267 (398)
T ss_pred CceEEEEEeccchhcCHHHHHHHHHHHHhhCCCEEEEE-EeCCchH--HHH-HHHHHHhCCCCeEEEeCCCCHHHHHHHH
Confidence 3467777777652 222333333344433 2334443 3433211 011 122222 34678889999865 578
Q ss_pred cccCcceEEec---cCc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 292 MHAAVSCFLTH---CGW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 292 ~h~~v~~fitH---gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+.+++ ||.- -|+ .+++||+++|+|+|+-+..+ ....+.+ |.+.... . +.+++.+++.+++.+
T Consensus 268 ~~ad~--~v~pS~~E~~g~~~~EAma~G~PVI~s~~gg----~~e~i~~--~~~~~~~----~--~~~~l~~~l~~~l~~ 333 (398)
T cd03796 268 VQGHI--FLNTSLTEAFCIAIVEAASCGLLVVSTRVGG----IPEVLPP--DMILLAE----P--DVESIVRKLEEAISI 333 (398)
T ss_pred HhCCE--EEeCChhhccCHHHHHHHHcCCCEEECCCCC----chhheeC--CceeecC----C--CHHHHHHHHHHHHhC
Confidence 88998 5532 244 39999999999999977643 2234443 4343322 2 679999999999875
No 100
>cd03809 GT1_mtfB_like This family is most closely related to the GT1 family of glycosyltransferases. mtfB (mannosyltransferase B) in E. coli has been shown to direct the growth of the O9-specific polysaccharide chain. It transfers two mannoses into the position 3 of the previously synthesized polysaccharide.
Probab=96.74 E-value=0.029 Score=53.97 Aligned_cols=89 Identities=19% Similarity=0.171 Sum_probs=58.5
Q ss_pred cCCCeEEEecccHH---HHhcccCcceEEec--cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCC
Q 045998 275 TKDRGLVVKWCSQE---KVLMHAAVSCFLTH--CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEED 349 (408)
Q Consensus 275 ~~~n~~v~~w~pq~---~lL~h~~v~~fitH--gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 349 (408)
..+|+.+.+|+|+. .+|+.+++..+-+. +.-++++||+++|+|+|+-...+ ....+.+ .|..+..
T Consensus 251 ~~~~v~~~g~~~~~~~~~~~~~~d~~l~ps~~e~~~~~~~Ea~a~G~pvI~~~~~~----~~e~~~~---~~~~~~~--- 320 (365)
T cd03809 251 LGDRVRFLGYVSDEELAALYRGARAFVFPSLYEGFGLPVLEAMACGTPVIASNISS----LPEVAGD---AALYFDP--- 320 (365)
T ss_pred CCCeEEECCCCChhHHHHHHhhhhhhcccchhccCCCCHHHHhcCCCcEEecCCCC----ccceecC---ceeeeCC---
Confidence 45788889999876 56888888332221 23458999999999999854421 1222222 3444432
Q ss_pred CCcCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 045998 350 GTLSIQQVQRCIDEATQGLNATQMKKRAV 378 (408)
Q Consensus 350 ~~~~~~~l~~~i~~vl~~~~~~~~~~~a~ 378 (408)
-+.+++.+++.+++.+ +..+.+..
T Consensus 321 --~~~~~~~~~i~~l~~~---~~~~~~~~ 344 (365)
T cd03809 321 --LDPEALAAAIERLLED---PALREELR 344 (365)
T ss_pred --CCHHHHHHHHHHHhcC---HHHHHHHH
Confidence 3789999999999887 45444433
No 101
>cd03811 GT1_WabH_like This family is most closely related to the GT1 family of glycosyltransferases. WabH in Klebsiella pneumoniae has been shown to transfer a GlcNAc residue from UDP-GlcNAc onto the acceptor GalUA residue in the cellular outer core.
Probab=96.72 E-value=0.037 Score=52.41 Aligned_cols=134 Identities=17% Similarity=0.108 Sum_probs=75.4
Q ss_pred CceEEEecCCcccC-CHHHHHHHHHHHHhC--CCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccHH-HHhcc
Q 045998 220 SSVIYISFGSLLVL-SQNQIDSIAAALINT--KRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQE-KVLMH 293 (408)
Q Consensus 220 ~~vvyvs~GS~~~~-~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq~-~lL~h 293 (408)
+..+++..|+.... ..+.+-+.+..+.+. +.++++ +|...... .+ ....++ ..+++.+.+|.+.. .++..
T Consensus 188 ~~~~i~~~g~~~~~k~~~~~i~~~~~l~~~~~~~~l~i-~G~~~~~~--~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~~ 263 (353)
T cd03811 188 DGPVILAVGRLSPQKGFDTLIRAFALLRKEGPDARLVI-LGDGPLRE--EL-EALAKELGLADRVHFLGFQSNPYPYLKA 263 (353)
T ss_pred CceEEEEEecchhhcChHHHHHHHHHhhhcCCCceEEE-EcCCccHH--HH-HHHHHhcCCCccEEEecccCCHHHHHHh
Confidence 34677777886621 223333333333332 344444 34332110 11 111122 24678888887654 68999
Q ss_pred cCcceEEec--cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHH---HHHHHHHhcC
Q 045998 294 AAVSCFLTH--CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQV---QRCIDEATQG 367 (408)
Q Consensus 294 ~~v~~fitH--gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l---~~~i~~vl~~ 367 (408)
+++.++-++ |.-++++||+++|+|+|+-... .....+.+ .+.|...+. -+.+.+ .+++.++..+
T Consensus 264 ~d~~i~ps~~e~~~~~~~Ea~~~G~PvI~~~~~----~~~e~i~~-~~~g~~~~~-----~~~~~~~~~~~~i~~~~~~ 332 (353)
T cd03811 264 ADLFVLSSRYEGFPNVLLEAMALGTPVVATDCP----GPREILED-GENGLLVPV-----GDEAALAAAALALLDLLLD 332 (353)
T ss_pred CCEEEeCcccCCCCcHHHHHHHhCCCEEEcCCC----ChHHHhcC-CCceEEECC-----CCHHHHHHHHHHHHhccCC
Confidence 998333332 3356899999999999986443 44556666 678888753 466666 4455555554
No 102
>cd03813 GT1_like_3 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.71 E-value=0.1 Score=53.17 Aligned_cols=80 Identities=19% Similarity=0.160 Sum_probs=57.8
Q ss_pred CCCeEEEecccHHHHhcccCcceEEec----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhcee-----e-eEEEee
Q 045998 276 KDRGLVVKWCSQEKVLMHAAVSCFLTH----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVF-----K-IGVRMR 345 (408)
Q Consensus 276 ~~n~~v~~w~pq~~lL~h~~v~~fitH----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~-----g-~G~~l~ 345 (408)
.+|+.+.+...-.++++.+++ +|.. |--++++||+++|+|+|+-.. ......+.+ . | .|..+.
T Consensus 353 ~~~V~f~G~~~v~~~l~~aDv--~vlpS~~Eg~p~~vlEAma~G~PVVatd~----g~~~elv~~-~~~~~~g~~G~lv~ 425 (475)
T cd03813 353 EDNVKFTGFQNVKEYLPKLDV--LVLTSISEGQPLVILEAMAAGIPVVATDV----GSCRELIEG-ADDEALGPAGEVVP 425 (475)
T ss_pred CCeEEEcCCccHHHHHHhCCE--EEeCchhhcCChHHHHHHHcCCCEEECCC----CChHHHhcC-CcccccCCceEEEC
Confidence 478888886666688999998 5533 234689999999999999543 233333433 2 2 677774
Q ss_pred cCCCCCcCHHHHHHHHHHHhcC
Q 045998 346 NEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 346 ~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
..+.+++.++|.+++.+
T Consensus 426 -----~~d~~~la~ai~~ll~~ 442 (475)
T cd03813 426 -----PADPEALARAILRLLKD 442 (475)
T ss_pred -----CCCHHHHHHHHHHHhcC
Confidence 35789999999999987
No 103
>TIGR03449 mycothiol_MshA UDP-N-acetylglucosamine: 1L-myo-inositol-1-phosphate 1-alpha-D-N-acetylglucosaminyltransferase. Members of this protein family, found exclusively in the Actinobacteria, are MshA, the glycosyltransferase of mycothiol biosynthesis. Mycothiol replaces glutathione in these species.
Probab=96.70 E-value=0.055 Score=53.59 Aligned_cols=80 Identities=18% Similarity=0.074 Sum_probs=59.5
Q ss_pred CCCeEEEecccHH---HHhcccCcceEEe---ccC-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCC
Q 045998 276 KDRGLVVKWCSQE---KVLMHAAVSCFLT---HCG-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEE 348 (408)
Q Consensus 276 ~~n~~v~~w~pq~---~lL~h~~v~~fit---HgG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 348 (408)
.+|+.+.+++|+. .+|+.+++ ||. +-| -.+++||+++|+|+|+....+ ....+.+ .+.|..+.
T Consensus 282 ~~~v~~~g~~~~~~~~~~l~~ad~--~v~ps~~E~~g~~~lEAma~G~Pvi~~~~~~----~~e~i~~-~~~g~~~~--- 351 (405)
T TIGR03449 282 ADRVRFLPPRPPEELVHVYRAADV--VAVPSYNESFGLVAMEAQACGTPVVAARVGG----LPVAVAD-GETGLLVD--- 351 (405)
T ss_pred CceEEECCCCCHHHHHHHHHhCCE--EEECCCCCCcChHHHHHHHcCCCEEEecCCC----cHhhhcc-CCceEECC---
Confidence 4688889999875 57999998 553 223 358999999999999976533 3344554 56787764
Q ss_pred CCCcCHHHHHHHHHHHhcC
Q 045998 349 DGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 349 ~~~~~~~~l~~~i~~vl~~ 367 (408)
.-+.+++.++|.+++++
T Consensus 352 --~~d~~~la~~i~~~l~~ 368 (405)
T TIGR03449 352 --GHDPADWADALARLLDD 368 (405)
T ss_pred --CCCHHHHHHHHHHHHhC
Confidence 34789999999999987
No 104
>PLN02949 transferase, transferring glycosyl groups
Probab=96.66 E-value=0.91 Score=46.16 Aligned_cols=81 Identities=20% Similarity=0.108 Sum_probs=53.1
Q ss_pred cCCCeEEEecccHH---HHhcccCcceEEe---ccCcc-hHHHHHHcCCceeeccCCCChhhhHHhhhce-ee-eEEEee
Q 045998 275 TKDRGLVVKWCSQE---KVLMHAAVSCFLT---HCGWN-STLETVAAGVPVIAYPEWTDQPTDAKLLVDV-FK-IGVRMR 345 (408)
Q Consensus 275 ~~~n~~v~~w~pq~---~lL~h~~v~~fit---HgG~~-s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~-~g-~G~~l~ 345 (408)
+.+++.+.+++|+. .+|+.+++ ++. +=|+| +++||+++|+|.|+....+-- ...+.+. .| .|...
T Consensus 333 L~~~V~f~g~v~~~el~~ll~~a~~--~v~~s~~E~FGivvlEAMA~G~PVIa~~~gGp~---~eIV~~~~~g~tG~l~- 406 (463)
T PLN02949 333 LDGDVEFHKNVSYRDLVRLLGGAVA--GLHSMIDEHFGISVVEYMAAGAVPIAHNSAGPK---MDIVLDEDGQQTGFLA- 406 (463)
T ss_pred CCCcEEEeCCCCHHHHHHHHHhCcE--EEeCCccCCCChHHHHHHHcCCcEEEeCCCCCc---ceeeecCCCCcccccC-
Confidence 35789999999866 46888887 552 22333 799999999999998654310 0111110 01 23322
Q ss_pred cCCCCCcCHHHHHHHHHHHhcC
Q 045998 346 NEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 346 ~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
. +.+++.++|.+++.+
T Consensus 407 ----~--~~~~la~ai~~ll~~ 422 (463)
T PLN02949 407 ----T--TVEEYADAILEVLRM 422 (463)
T ss_pred ----C--CHHHHHHHHHHHHhC
Confidence 1 689999999999974
No 105
>PF06722 DUF1205: Protein of unknown function (DUF1205); InterPro: IPR010610 This entry represents a conserved region of unknown function within bacterial glycosyl transferases. Many proteins containing this domain are members of the glycosyl transferase family 28 IPR004276 from INTERPRO.; PDB: 3OTH_A 3OTG_A 3OTI_A 3D0R_A 3D0Q_B 2P6P_A 3UYK_A 3UYL_B 3TSA_B 2YJN_A.
Probab=96.56 E-value=0.0027 Score=49.64 Aligned_cols=57 Identities=16% Similarity=0.311 Sum_probs=46.3
Q ss_pred hhhccCCCCceEEEecCCcccC---CH--HHHHHHHHHHHhCCCCEEEEEecCCcccccccc
Q 045998 212 QWLNKKPPSSVIYISFGSLLVL---SQ--NQIDSIAAALINTKRPFLWVIRSQENKEGGVLR 268 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~~~---~~--~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp 268 (408)
.|+...+.++.|+||+||.... .. ..+..+++++++.+..+|..+........+.+|
T Consensus 32 ~Wl~~~~~RpRVcvT~G~~~~~~~g~~~~~~l~~ll~ala~ldvEvV~a~~~~~~~~lg~lP 93 (97)
T PF06722_consen 32 DWLLEPPGRPRVCVTLGTSVRMFFGPGGVPLLRRLLEALAGLDVEVVVALPAAQRAELGELP 93 (97)
T ss_dssp GGGSSSTSSEEEEEEETHHHCHHHSCHHHCHHHHHHHHHHTSSSEEEEEETTCCCGGCCS-T
T ss_pred cccccCCCCCEEEEEcCCCccccccccchHHHHHHHHHHhhCCcEEEEECCHHHHHhhCCCC
Confidence 9999988999999999998843 33 478899999999999999999877655334455
No 106
>KOG4626 consensus O-linked N-acetylglucosamine transferase OGT [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones; Signal transduction mechanisms]
Probab=96.50 E-value=0.02 Score=58.14 Aligned_cols=122 Identities=23% Similarity=0.395 Sum_probs=84.1
Q ss_pred CCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhh---hh---cCCCeEEEecccHH---
Q 045998 218 PPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFL---EE---TKDRGLVVKWCSQE--- 288 (408)
Q Consensus 218 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~---~~---~~~n~~v~~w~pq~--- 288 (408)
++.-|||.+|--....+++.++..++-|...+..++|..+..-..+ ..|. +. -++++.+.+-+.-.
T Consensus 756 p~d~vvf~~FNqLyKidP~~l~~W~~ILk~VPnS~LwllrfPa~ge-----~rf~ty~~~~Gl~p~riifs~va~k~eHv 830 (966)
T KOG4626|consen 756 PEDAVVFCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE-----QRFRTYAEQLGLEPDRIIFSPVAAKEEHV 830 (966)
T ss_pred CCCeEEEeechhhhcCCHHHHHHHHHHHHhCCcceeEEEeccccch-----HHHHHHHHHhCCCccceeeccccchHHHH
Confidence 3556999999999999999999999999999999999998753221 1221 11 14666665544432
Q ss_pred --HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCC-ChhhhHHhhhceeeeEEEeec
Q 045998 289 --KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWT-DQPTDAKLLVDVFKIGVRMRN 346 (408)
Q Consensus 289 --~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~-DQ~~na~~v~~~~g~G~~l~~ 346 (408)
..|+.-.+..+.+. |..|.++.+++|||||.+|.-. -...-+..+.. .|+|-.+-+
T Consensus 831 rr~~LaDv~LDTplcn-GhTTg~dvLw~GvPmVTmpge~lAsrVa~Sll~~-~Gl~hliak 889 (966)
T KOG4626|consen 831 RRGQLADVCLDTPLCN-GHTTGMDVLWAGVPMVTMPGETLASRVAASLLTA-LGLGHLIAK 889 (966)
T ss_pred HhhhhhhhcccCcCcC-CcccchhhhccCCceeecccHHHHHHHHHHHHHH-cccHHHHhh
Confidence 23444444445554 6788999999999999999754 23334456666 888886644
No 107
>cd04955 GT1_like_6 This family is most closely related to the GT1 family of glycosyltransferases. Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homolog
Probab=96.49 E-value=0.069 Score=51.54 Aligned_cols=123 Identities=20% Similarity=0.317 Sum_probs=70.0
Q ss_pred EEecCCcccCCHHHHHHHHHHHHhCC--CCEEEEEecCCcccccccchhhh--hhcCCCeEEEecccHHH---HhcccCc
Q 045998 224 YISFGSLLVLSQNQIDSIAAALINTK--RPFLWVIRSQENKEGGVLRAGFL--EETKDRGLVVKWCSQEK---VLMHAAV 296 (408)
Q Consensus 224 yvs~GS~~~~~~~~~~~~~~al~~~~--~~~iw~~~~~~~~~~~~lp~~~~--~~~~~n~~v~~w~pq~~---lL~h~~v 296 (408)
++..|+... ..-+..+++++++.. .+++ .+|...... .+-+.+. ....+++.+.+++|+.+ ++..+++
T Consensus 196 i~~~G~~~~--~Kg~~~li~a~~~l~~~~~l~-ivG~~~~~~--~~~~~~~~~~~~~~~V~~~g~~~~~~~~~~~~~ad~ 270 (363)
T cd04955 196 YLLVGRIVP--ENNIDDLIEAFSKSNSGKKLV-IVGNADHNT--PYGKLLKEKAAADPRIIFVGPIYDQELLELLRYAAL 270 (363)
T ss_pred EEEEecccc--cCCHHHHHHHHHhhccCceEE-EEcCCCCcc--hHHHHHHHHhCCCCcEEEccccChHHHHHHHHhCCE
Confidence 445677662 222445566666543 4443 445432110 1111121 12357888999999874 5666777
Q ss_pred ceEEeccCc-----chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 297 SCFLTHCGW-----NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 297 ~~fitHgG~-----~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++.+.-. ++++||+++|+|+|+....+ +...+.. .|..... . +.+.+++.+++.+
T Consensus 271 --~v~ps~~~e~~~~~~~EAma~G~PvI~s~~~~----~~e~~~~---~g~~~~~---~----~~l~~~i~~l~~~ 330 (363)
T cd04955 271 --FYLHGHSVGGTNPSLLEAMAYGCPVLASDNPF----NREVLGD---KAIYFKV---G----DDLASLLEELEAD 330 (363)
T ss_pred --EEeCCccCCCCChHHHHHHHcCCCEEEecCCc----cceeecC---CeeEecC---c----hHHHHHHHHHHhC
Confidence 5554333 47899999999999875432 2222332 2333332 1 1299999999987
No 108
>cd03802 GT1_AviGT4_like This family is most closely related to the GT1 family of glycosyltransferases. aviGT4 in Streptomyces viridochromogenes has been shown to be involved in biosynthesis of oligosaccharide antibiotic avilamycin A. Inactivation of aviGT4 resulted in a mutant that accumulated a novel avilamycin derivative lacking the terminal eurekanate residue.
Probab=96.18 E-value=0.11 Score=49.43 Aligned_cols=128 Identities=13% Similarity=0.119 Sum_probs=78.3
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccHH---HHhcccCcc
Q 045998 223 IYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQE---KVLMHAAVS 297 (408)
Q Consensus 223 vyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq~---~lL~h~~v~ 297 (408)
+.+..|... +..-...+++++.+.+.++++ +|...... .+-....+. ..+++.+.+++++. .+++.+++.
T Consensus 173 ~i~~~Gr~~--~~Kg~~~li~~~~~~~~~l~i-~G~~~~~~--~~~~~~~~~~~~~~~v~~~G~~~~~~~~~~~~~~d~~ 247 (335)
T cd03802 173 YLLFLGRIS--PEKGPHLAIRAARRAGIPLKL-AGPVSDPD--YFYREIAPELLDGPDIEYLGEVGGAEKAELLGNARAL 247 (335)
T ss_pred EEEEEEeec--cccCHHHHHHHHHhcCCeEEE-EeCCCCHH--HHHHHHHHhcccCCcEEEeCCCCHHHHHHHHHhCcEE
Confidence 444556664 222345566777777877665 44432110 111111111 25889999999886 468888884
Q ss_pred eEEec--cCc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 298 CFLTH--CGW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 298 ~fitH--gG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++-+. -|+ .+++||+++|+|+|+....+ +...+.+ -..|..+. . .+++.+++.+++..
T Consensus 248 v~ps~~~E~~~~~~lEAma~G~PvI~~~~~~----~~e~i~~-~~~g~l~~----~---~~~l~~~l~~l~~~ 308 (335)
T cd03802 248 LFPILWEEPFGLVMIEAMACGTPVIAFRRGA----VPEVVED-GVTGFLVD----S---VEELAAAVARADRL 308 (335)
T ss_pred EeCCcccCCcchHHHHHHhcCCCEEEeCCCC----chhheeC-CCcEEEeC----C---HHHHHHHHHHHhcc
Confidence 44332 343 47999999999999876532 3334444 33677663 2 89999999888654
No 109
>PRK09814 beta-1,6-galactofuranosyltransferase; Provisional
Probab=96.17 E-value=0.023 Score=55.09 Aligned_cols=97 Identities=16% Similarity=0.240 Sum_probs=69.4
Q ss_pred CCCeEEEecccHHHHh---cccCcceEEecc-------Cc------chHHHHHHcCCceeeccCCCChhhhHHhhhceee
Q 045998 276 KDRGLVVKWCSQEKVL---MHAAVSCFLTHC-------GW------NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFK 339 (408)
Q Consensus 276 ~~n~~v~~w~pq~~lL---~h~~v~~fitHg-------G~------~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g 339 (408)
.+|+.+.+|+|+.++. +. +.+.+...- .+ +-+.+.+++|+|+|+++ +...+..|++ .+
T Consensus 206 ~~~V~f~G~~~~eel~~~l~~-~~gLv~~~~~~~~~~~~y~~~~~P~K~~~ymA~G~PVI~~~----~~~~~~~V~~-~~ 279 (333)
T PRK09814 206 SANISYKGWFDPEELPNELSK-GFGLVWDGDTNDGEYGEYYKYNNPHKLSLYLAAGLPVIVWS----KAAIADFIVE-NG 279 (333)
T ss_pred CCCeEEecCCCHHHHHHHHhc-CcCeEEcCCCCCccchhhhhccchHHHHHHHHCCCCEEECC----CccHHHHHHh-CC
Confidence 4789999999998664 43 433332211 11 12677899999999964 4567788887 89
Q ss_pred eEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 045998 340 IGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 340 ~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 386 (408)
+|+.++ +.+++.+++.++. +++-..|++|++++++.++.
T Consensus 280 ~G~~v~-------~~~el~~~l~~~~-~~~~~~m~~n~~~~~~~~~~ 318 (333)
T PRK09814 280 LGFVVD-------SLEELPEIIDNIT-EEEYQEMVENVKKISKLLRN 318 (333)
T ss_pred ceEEeC-------CHHHHHHHHHhcC-HHHHHHHHHHHHHHHHHHhc
Confidence 999984 4578988888754 33345789999999998865
No 110
>PRK15179 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=96.09 E-value=0.26 Score=52.46 Aligned_cols=95 Identities=18% Similarity=0.233 Sum_probs=64.6
Q ss_pred CCCeEEEecccHH-HHhcccCcceEEe---ccC-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCC
Q 045998 276 KDRGLVVKWCSQE-KVLMHAAVSCFLT---HCG-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDG 350 (408)
Q Consensus 276 ~~n~~v~~w~pq~-~lL~h~~v~~fit---HgG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 350 (408)
.+++.+.+|.+.. .+|..+++ ||. +-| -++++||+++|+|+|+....+ ....+.+ -..|+.+.. +
T Consensus 573 ~~~V~flG~~~dv~~ll~aaDv--~VlpS~~Egfp~vlLEAMA~G~PVVat~~gG----~~EiV~d-g~~GlLv~~---~ 642 (694)
T PRK15179 573 GERILFTGLSRRVGYWLTQFNA--FLLLSRFEGLPNVLIEAQFSGVPVVTTLAGG----AGEAVQE-GVTGLTLPA---D 642 (694)
T ss_pred CCcEEEcCCcchHHHHHHhcCE--EEeccccccchHHHHHHHHcCCeEEEECCCC----hHHHccC-CCCEEEeCC---C
Confidence 4788888988754 68899998 654 344 568899999999999976532 4445555 457888865 5
Q ss_pred CcCHHHHHHHHHHHhcCC-cHHHHHHHHHHH
Q 045998 351 TLSIQQVQRCIDEATQGL-NATQMKKRAVAW 380 (408)
Q Consensus 351 ~~~~~~l~~~i~~vl~~~-~~~~~~~~a~~l 380 (408)
+.+.+++.+++.+++.+. ..+.+++++++.
T Consensus 643 d~~~~~La~aL~~ll~~l~~~~~l~~~ar~~ 673 (694)
T PRK15179 643 TVTAPDVAEALARIHDMCAADPGIARKAADW 673 (694)
T ss_pred CCChHHHHHHHHHHHhChhccHHHHHHHHHH
Confidence 566667777776665431 115566655443
No 111
>cd03812 GT1_CapH_like This family is most closely related to the GT1 family of glycosyltransferases. capH in Staphylococcus aureus has been shown to be required for the biosynthesis of the type 1 capsular polysaccharide (CP1).
Probab=96.03 E-value=0.16 Score=48.87 Aligned_cols=132 Identities=16% Similarity=0.075 Sum_probs=76.6
Q ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhC--CCCEEEEEecCCcccccccchhhh-hhcCCCeEEEecccH-HHHhcccC
Q 045998 221 SVIYISFGSLLV-LSQNQIDSIAAALINT--KRPFLWVIRSQENKEGGVLRAGFL-EETKDRGLVVKWCSQ-EKVLMHAA 295 (408)
Q Consensus 221 ~vvyvs~GS~~~-~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~lp~~~~-~~~~~n~~v~~w~pq-~~lL~h~~ 295 (408)
..+++..|+... -.-+.+-+.+..+.+. +.++++ +|..... ..+-.... ....+++.+.++..+ ..++..++
T Consensus 192 ~~~i~~vGr~~~~Kg~~~li~a~~~l~~~~~~~~l~i-vG~g~~~--~~~~~~~~~~~~~~~v~~~g~~~~~~~~~~~ad 268 (358)
T cd03812 192 KFVIGHVGRFSEQKNHEFLIEIFAELLKKNPNAKLLL-VGDGELE--EEIKKKVKELGLEDKVIFLGVRNDVPELLQAMD 268 (358)
T ss_pred CEEEEEEeccccccChHHHHHHHHHHHHhCCCeEEEE-EeCCchH--HHHHHHHHhcCCCCcEEEecccCCHHHHHHhcC
Confidence 456666777652 2234444444444443 333333 3443211 01111111 123477888887544 47899999
Q ss_pred cceEEec----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 296 VSCFLTH----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 296 v~~fitH----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
+ +|.- |--++++||+++|+|+|+-...+ ....+.+ +.|..+. .-+.+++.++|.++++++
T Consensus 269 i--~v~ps~~E~~~~~~lEAma~G~PvI~s~~~~----~~~~i~~--~~~~~~~-----~~~~~~~a~~i~~l~~~~ 332 (358)
T cd03812 269 V--FLFPSLYEGLPLVLIEAQASGLPCILSDTIT----KEVDLTD--LVKFLSL-----DESPEIWAEEILKLKSED 332 (358)
T ss_pred E--EEecccccCCCHHHHHHHHhCCCEEEEcCCc----hhhhhcc--CccEEeC-----CCCHHHHHHHHHHHHhCc
Confidence 8 5543 34678999999999999865544 2333443 5555553 235799999999999883
No 112
>cd03792 GT1_Trehalose_phosphorylase Trehalose phosphorylase (TP) reversibly catalyzes trehalose synthesis and degradation from alpha-glucose-1-phosphate (alpha-Glc-1-P) and glucose. The catalyzing activity includes the phosphorolysis of trehalose, which produce alpha-Glc-1-P and glucose, and the subsequent synthesis of trehalose. This family is most closely related to the GT1 family of glycosyltransferases.
Probab=96.01 E-value=0.59 Score=45.73 Aligned_cols=78 Identities=18% Similarity=0.051 Sum_probs=53.7
Q ss_pred CCCeEEEecc--cHH---HHhcccCcceEEeccC----cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeec
Q 045998 276 KDRGLVVKWC--SQE---KVLMHAAVSCFLTHCG----WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRN 346 (408)
Q Consensus 276 ~~n~~v~~w~--pq~---~lL~h~~v~~fitHgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 346 (408)
.+++.+.++. ++. .+++.+++ |+...- -.+++||+++|+|+|+-...+ ....+.. -..|+.+.
T Consensus 251 ~~~v~~~~~~~~~~~~~~~~~~~ad~--~v~~s~~Eg~g~~~lEA~a~G~Pvv~s~~~~----~~~~i~~-~~~g~~~~- 322 (372)
T cd03792 251 DPDIHVLTLPPVSDLEVNALQRASTV--VLQKSIREGFGLTVTEALWKGKPVIAGPVGG----IPLQIED-GETGFLVD- 322 (372)
T ss_pred CCCeEEEecCCCCHHHHHHHHHhCeE--EEeCCCccCCCHHHHHHHHcCCCEEEcCCCC----chhhccc-CCceEEeC-
Confidence 4677777776 433 57888888 775432 348999999999999976433 2334544 45676553
Q ss_pred CCCCCcCHHHHHHHHHHHhcC
Q 045998 347 EEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 347 ~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+.+++..+|.+++.+
T Consensus 323 ------~~~~~a~~i~~ll~~ 337 (372)
T cd03792 323 ------TVEEAAVRILYLLRD 337 (372)
T ss_pred ------CcHHHHHHHHHHHcC
Confidence 346777899999987
No 113
>cd04950 GT1_like_1 Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. This group of glycosyltransferases is most closely related to the previously defined glycosyltransferase family 1 (GT1). The members of this family may transfer UDP, ADP, GDP, or CMP linked sugars. The diverse enzymatic activities among members of this family reflect a wide range of biological functions. The protein structure available for this family has the GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center
Probab=95.83 E-value=0.37 Score=47.36 Aligned_cols=78 Identities=18% Similarity=0.056 Sum_probs=52.7
Q ss_pred CCeEEEecccHHH---HhcccCcceEE------eccC-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeec
Q 045998 277 DRGLVVKWCSQEK---VLMHAAVSCFL------THCG-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRN 346 (408)
Q Consensus 277 ~n~~v~~w~pq~~---lL~h~~v~~fi------tHgG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 346 (408)
+|+.+.+++|+.+ .|+++++..+- +.++ -+-+.|++++|+|+|+.++ ...+.. .+ |..+..
T Consensus 254 ~nV~~~G~~~~~~l~~~l~~~Dv~l~P~~~~~~~~~~~P~Kl~EylA~G~PVVat~~-------~~~~~~-~~-~~~~~~ 324 (373)
T cd04950 254 PNVHYLGPKPYKELPAYLAGFDVAILPFRLNELTRATSPLKLFEYLAAGKPVVATPL-------PEVRRY-ED-EVVLIA 324 (373)
T ss_pred CCEEEeCCCCHHHHHHHHHhCCEEecCCccchhhhcCCcchHHHHhccCCCEEecCc-------HHHHhh-cC-cEEEeC
Confidence 7999999998664 68889984432 2223 2458999999999998763 122232 33 333322
Q ss_pred CCCCCcCHHHHHHHHHHHhcCC
Q 045998 347 EEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 347 ~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
+ +.+++.++|++++.++
T Consensus 325 ---~--d~~~~~~ai~~~l~~~ 341 (373)
T cd04950 325 ---D--DPEEFVAAIEKALLED 341 (373)
T ss_pred ---C--CHHHHHHHHHHHHhcC
Confidence 2 7899999999977653
No 114
>PHA01633 putative glycosyl transferase group 1
Probab=95.72 E-value=0.45 Score=46.08 Aligned_cols=102 Identities=15% Similarity=0.063 Sum_probs=62.5
Q ss_pred cCCCeEEE---ecccHH---HHhcccCcceEEecc---C-cchHHHHHHcCCceeeccC------CCCh------hhhHH
Q 045998 275 TKDRGLVV---KWCSQE---KVLMHAAVSCFLTHC---G-WNSTLETVAAGVPVIAYPE------WTDQ------PTDAK 332 (408)
Q Consensus 275 ~~~n~~v~---~w~pq~---~lL~h~~v~~fitHg---G-~~s~~eal~~GvP~i~~P~------~~DQ------~~na~ 332 (408)
.++++.+. +++++. .+++.+++ |+.-. | -++++||+++|+|+|+--. .+|+ ..+..
T Consensus 199 l~~~V~f~g~~G~~~~~dl~~~y~~aDi--fV~PS~~EgfGlvlLEAMA~G~PVVas~~~~l~Ei~g~~~~~Li~~~~v~ 276 (335)
T PHA01633 199 VPANVHFVAEFGHNSREYIFAFYGAMDF--TIVPSGTEGFGMPVLESMAMGTPVIHQLMPPLDEFTSWQWNLLIKSSKVE 276 (335)
T ss_pred CCCcEEEEecCCCCCHHHHHHHHHhCCE--EEECCccccCCHHHHHHHHcCCCEEEccCCCceeecCCccceeeCCCCHH
Confidence 34788887 455654 67888998 77542 4 3468999999999998633 2332 22222
Q ss_pred hhh-ceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHH
Q 045998 333 LLV-DVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEA 383 (408)
Q Consensus 333 ~v~-~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~ 383 (408)
... ...|.|..+ ...+.+++.++|.+++...+.+....++++.++.
T Consensus 277 ~~~~~~~g~g~~~-----~~~d~~~la~ai~~~~~~~~~~~~~~~~~~~a~~ 323 (335)
T PHA01633 277 EYYDKEHGQKWKI-----HKFQIEDMANAIILAFELQDREERSMKLKELAKK 323 (335)
T ss_pred HhcCcccCceeee-----cCCCHHHHHHHHHHHHhccChhhhhHHHHHHHHh
Confidence 222 114666666 3579999999999985432222333444444443
No 115
>PRK15490 Vi polysaccharide biosynthesis protein TviE; Provisional
Probab=95.59 E-value=0.64 Score=47.92 Aligned_cols=64 Identities=27% Similarity=0.286 Sum_probs=47.2
Q ss_pred CCCeEEEecccHH-HHhcccCcceEEec---cC-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeec
Q 045998 276 KDRGLVVKWCSQE-KVLMHAAVSCFLTH---CG-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRN 346 (408)
Q Consensus 276 ~~n~~v~~w~pq~-~lL~h~~v~~fitH---gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 346 (408)
.+|+.+.+|..+. .+|+.+++ ||.. -| -++++||+++|+|+|+.... .+...+.+ -..|..+..
T Consensus 454 ~d~V~FlG~~~Dv~~~LaaADV--fVlPS~~EGfp~vlLEAMA~GlPVVATdvG----G~~EiV~d-G~nG~LVp~ 522 (578)
T PRK15490 454 LERILFVGASRDVGYWLQKMNV--FILFSRYEGLPNVLIEAQMVGVPVISTPAG----GSAECFIE-GVSGFILDD 522 (578)
T ss_pred CCcEEECCChhhHHHHHHhCCE--EEEcccccCccHHHHHHHHhCCCEEEeCCC----CcHHHccc-CCcEEEECC
Confidence 4788888886543 67899999 7753 34 56899999999999987653 34555665 568888864
No 116
>PRK10017 colanic acid biosynthesis protein; Provisional
Probab=95.53 E-value=0.44 Score=47.81 Aligned_cols=177 Identities=14% Similarity=0.196 Sum_probs=99.2
Q ss_pred hhhccCCCCceEEEecCCccc------CC-H---HHHHHHHHHHHhCCCCEEEEEecCCc----ccccccchhhhhhcC-
Q 045998 212 QWLNKKPPSSVIYISFGSLLV------LS-Q---NQIDSIAAALINTKRPFLWVIRSQEN----KEGGVLRAGFLEETK- 276 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~~------~~-~---~~~~~~~~al~~~~~~~iw~~~~~~~----~~~~~lp~~~~~~~~- 276 (408)
.|+...+.+++|-|+.-.-.. .. . +.+.++++.|.+.|+++++.-...+. ..+...-..+.+.++
T Consensus 226 ~~~~~~~~~~~Vgisvr~~~~~~~~~~~~~~~Y~~~la~~i~~Li~~g~~Vv~lp~~~~~~~~~~dD~~~~~~l~~~~~~ 305 (426)
T PRK10017 226 HWLDVAAQQKTVAITLRELAPFDKRLGTTQQAYEKAFAGVVNRIIDEGYQVIALSTCTGIDSYNKDDRMVALNLRQHVSD 305 (426)
T ss_pred hhhcccccCCEEEEEecccccccccccccHHHHHHHHHHHHHHHHHCCCeEEEEecccCccCCCCchHHHHHHHHHhccc
Confidence 555443345577777554321 12 1 23444556566678888876532110 000011122333333
Q ss_pred -CCeEEE--ecccHH--HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEE-eecCCCC
Q 045998 277 -DRGLVV--KWCSQE--KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVR-MRNEEDG 350 (408)
Q Consensus 277 -~n~~v~--~w~pq~--~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~-l~~~~~~ 350 (408)
++..++ .+-+.+ .+++++++ +|..= +=++.-|+..|||.++++. |+- ....+.. +|..-. ++. .
T Consensus 306 ~~~~~vi~~~~~~~e~~~iIs~~dl--~ig~R-lHa~I~a~~~gvP~i~i~Y--~~K-~~~~~~~-lg~~~~~~~~---~ 375 (426)
T PRK10017 306 PARYHVVMDELNDLEMGKILGACEL--TVGTR-LHSAIISMNFGTPAIAINY--EHK-SAGIMQQ-LGLPEMAIDI---R 375 (426)
T ss_pred ccceeEecCCCChHHHHHHHhhCCE--EEEec-chHHHHHHHcCCCEEEeee--hHH-HHHHHHH-cCCccEEech---h
Confidence 334443 333444 78889987 77642 3357778999999999987 333 3333455 776644 444 6
Q ss_pred CcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 351 TLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 351 ~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
.++.++|.+.+.+++.+. +.+++..++--+.+++ .+..-..++++++.
T Consensus 376 ~l~~~~Li~~v~~~~~~r--~~~~~~l~~~v~~~r~------~~~~~~~~~~~~~~ 423 (426)
T PRK10017 376 HLLDGSLQAMVADTLGQL--PALNARLAEAVSRERQ------TGMQMVQSVLERIG 423 (426)
T ss_pred hCCHHHHHHHHHHHHhCH--HHHHHHHHHHHHHHHH------HHHHHHHHHHHHhc
Confidence 788899999999999874 4555554444443333 12345566776664
No 117
>TIGR02095 glgA glycogen/starch synthases, ADP-glucose type. This family consists of glycogen (or starch) synthases that use ADP-glucose (EC 2.4.1.21), rather than UDP-glucose (EC 2.4.1.11) as in animals, as the glucose donor. This enzyme is found in bacteria and plants. Whether the name given is glycogen synthase or starch synthase depends on context, and therefore on substrate.
Probab=95.52 E-value=0.58 Score=47.61 Aligned_cols=132 Identities=11% Similarity=0.045 Sum_probs=74.7
Q ss_pred eEEEecCCccc-CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhcccCcc
Q 045998 222 VIYISFGSLLV-LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHAAVS 297 (408)
Q Consensus 222 vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~~v~ 297 (408)
.+++..|.... -..+.+.+.+..+.+.+.+++++ |..+......+ ..+.++.+.|+.+....+.. .+++.+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~~~~~~~l-~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv- 368 (473)
T TIGR02095 292 PLFGVISRLTQQKGVDLLLAALPELLELGGQLVVL-GTGDPELEEAL-RELAERYPGNVRVIIGYDEALAHLIYAGADF- 368 (473)
T ss_pred CEEEEEecCccccChHHHHHHHHHHHHcCcEEEEE-CCCCHHHHHHH-HHHHHHCCCcEEEEEcCCHHHHHHHHHhCCE-
Confidence 45566677663 22233334444444445565543 44321100011 12223345667666545554 57888998
Q ss_pred eEEecc---Cc-chHHHHHHcCCceeeccCCCChhhhHHhhhc-----eeeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 298 CFLTHC---GW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVD-----VFKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 298 ~fitHg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~-----~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
|+.-. |. .+++||+++|+|.|+-...+ ....+.+ .-+.|..+. .-+.+++.++|.+++.
T Consensus 369 -~l~pS~~E~~gl~~lEAma~G~pvI~s~~gg----~~e~v~~~~~~~~~~~G~l~~-----~~d~~~la~~i~~~l~ 436 (473)
T TIGR02095 369 -ILMPSRFEPCGLTQLYAMRYGTVPIVRRTGG----LADTVVDGDPEAESGTGFLFE-----EYDPGALLAALSRALR 436 (473)
T ss_pred -EEeCCCcCCcHHHHHHHHHCCCCeEEccCCC----ccceEecCCCCCCCCceEEeC-----CCCHHHHHHHHHHHHH
Confidence 66432 33 37899999999999875533 2222332 027888875 3478899999999886
No 118
>PLN00142 sucrose synthase
Probab=95.38 E-value=5.1 Score=43.40 Aligned_cols=78 Identities=14% Similarity=0.177 Sum_probs=49.1
Q ss_pred CCCeEEEe----cccHHHHhc----ccCcceEEec---cCcc-hHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEE
Q 045998 276 KDRGLVVK----WCSQEKVLM----HAAVSCFLTH---CGWN-STLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVR 343 (408)
Q Consensus 276 ~~n~~v~~----w~pq~~lL~----h~~v~~fitH---gG~~-s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~ 343 (408)
.+++...+ ..+..++.. ..++ ||.- =|+| +++||+++|+|+|+-...+ ....|++ -..|..
T Consensus 641 ~~~V~flG~~~~~~~~~eLyr~iadaaDV--fVlPS~~EgFGLvvLEAMA~GlPVVATdvGG----~~EIV~d-G~tG~L 713 (815)
T PLN00142 641 KGQFRWIAAQTNRVRNGELYRYIADTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATCQGG----PAEIIVD-GVSGFH 713 (815)
T ss_pred CCcEEEcCCcCCcccHHHHHHHHHhhCCE--EEeCCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcC-CCcEEE
Confidence 36666554 334445544 2345 7653 3444 8999999999999965443 4445554 457888
Q ss_pred eecCCCCCcCHHHHHHHHHHHh
Q 045998 344 MRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 344 l~~~~~~~~~~~~l~~~i~~vl 365 (408)
++. -+.+++.++|.+++
T Consensus 714 V~P-----~D~eaLA~aI~~lL 730 (815)
T PLN00142 714 IDP-----YHGDEAANKIADFF 730 (815)
T ss_pred eCC-----CCHHHHHHHHHHHH
Confidence 853 36777888776554
No 119
>PRK14098 glycogen synthase; Provisional
Probab=95.33 E-value=0.79 Score=46.94 Aligned_cols=134 Identities=11% Similarity=0.027 Sum_probs=75.3
Q ss_pred eEEEecCCcccC-CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhcccCcc
Q 045998 222 VIYISFGSLLVL-SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHAAVS 297 (408)
Q Consensus 222 vvyvs~GS~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~~v~ 297 (408)
.+++..|..... ..+.+.+.+..+.+.+.++++ +|.++......+ ..+.++.++|+.+....+.. .+++.+++
T Consensus 308 ~~i~~vgRl~~~KG~d~li~a~~~l~~~~~~lvi-vG~G~~~~~~~l-~~l~~~~~~~V~~~g~~~~~~~~~~~a~aDi- 384 (489)
T PRK14098 308 PLVGVIINFDDFQGAELLAESLEKLVELDIQLVI-CGSGDKEYEKRF-QDFAEEHPEQVSVQTEFTDAFFHLAIAGLDM- 384 (489)
T ss_pred CEEEEeccccccCcHHHHHHHHHHHHhcCcEEEE-EeCCCHHHHHHH-HHHHHHCCCCEEEEEecCHHHHHHHHHhCCE-
Confidence 455556666532 223333333334444555444 454321100012 22333456788888888764 68899999
Q ss_pred eEEeccC---c-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHh
Q 045998 298 CFLTHCG---W-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 298 ~fitHgG---~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl 365 (408)
|+...= . .+.+||+++|+|.|+....+-...-.....+ -+.|..+. .-+.+++.++|.+++
T Consensus 385 -~l~PS~~E~~Gl~~lEAma~G~ppVv~~~GGl~d~v~~~~~~-~~~G~l~~-----~~d~~~la~ai~~~l 449 (489)
T PRK14098 385 -LLMPGKIESCGMLQMFAMSYGTIPVAYAGGGIVETIEEVSED-KGSGFIFH-----DYTPEALVAKLGEAL 449 (489)
T ss_pred -EEeCCCCCCchHHHHHHHhCCCCeEEecCCCCceeeecCCCC-CCceeEeC-----CCCHHHHHHHHHHHH
Confidence 775432 1 3778999999988887653311110011122 36787774 347899999998876
No 120
>PLN02275 transferase, transferring glycosyl groups
Probab=95.18 E-value=0.18 Score=49.53 Aligned_cols=75 Identities=20% Similarity=0.167 Sum_probs=53.3
Q ss_pred CCeEEE-ecccHHHH---hcccCcceEEe-c-----cC-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEee
Q 045998 277 DRGLVV-KWCSQEKV---LMHAAVSCFLT-H-----CG-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMR 345 (408)
Q Consensus 277 ~n~~v~-~w~pq~~l---L~h~~v~~fit-H-----gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 345 (408)
+|+.+. .|+|+.++ |+.+++ |+. + -| -++++||+++|+|+|+.... .+...+.+ -+.|..+.
T Consensus 286 ~~v~~~~~~~~~~~~~~~l~~aDv--~v~~~~s~~~e~~p~~llEAmA~G~PVVa~~~g----g~~eiv~~-g~~G~lv~ 358 (371)
T PLN02275 286 RHVAFRTMWLEAEDYPLLLGSADL--GVSLHTSSSGLDLPMKVVDMFGCGLPVCAVSYS----CIGELVKD-GKNGLLFS 358 (371)
T ss_pred CceEEEcCCCCHHHHHHHHHhCCE--EEEeccccccccccHHHHHHHHCCCCEEEecCC----ChHHHccC-CCCeEEEC
Confidence 456655 47888654 999999 663 1 12 34799999999999997532 25566665 66898873
Q ss_pred cCCCCCcCHHHHHHHHHHHh
Q 045998 346 NEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 346 ~~~~~~~~~~~l~~~i~~vl 365 (408)
+.+++.++|.+++
T Consensus 359 -------~~~~la~~i~~l~ 371 (371)
T PLN02275 359 -------SSSELADQLLELL 371 (371)
T ss_pred -------CHHHHHHHHHHhC
Confidence 3688988887764
No 121
>PRK00654 glgA glycogen synthase; Provisional
Probab=95.09 E-value=1.2 Score=45.26 Aligned_cols=136 Identities=10% Similarity=0.083 Sum_probs=73.0
Q ss_pred ceEEEecCCcccC-CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEE-EecccHH--HHhcccCc
Q 045998 221 SVIYISFGSLLVL-SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLV-VKWCSQE--KVLMHAAV 296 (408)
Q Consensus 221 ~vvyvs~GS~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v-~~w~pq~--~lL~h~~v 296 (408)
..+++..|..... ..+.+.+.+.-+.+.+.+++++ |..+......+ ..+.++.+.++.+ .+|-.+. .+++.+++
T Consensus 282 ~~~i~~vGRl~~~KG~~~li~a~~~l~~~~~~lviv-G~g~~~~~~~l-~~l~~~~~~~v~~~~g~~~~~~~~~~~~aDv 359 (466)
T PRK00654 282 APLFAMVSRLTEQKGLDLVLEALPELLEQGGQLVLL-GTGDPELEEAF-RALAARYPGKVGVQIGYDEALAHRIYAGADM 359 (466)
T ss_pred CcEEEEeeccccccChHHHHHHHHHHHhcCCEEEEE-ecCcHHHHHHH-HHHHHHCCCcEEEEEeCCHHHHHHHHhhCCE
Confidence 3456666776621 2223223223333346666655 44321100011 1222334566554 4663332 57899999
Q ss_pred ceEEec---cCc-chHHHHHHcCCceeeccCCC--ChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 297 SCFLTH---CGW-NSTLETVAAGVPVIAYPEWT--DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 297 ~~fitH---gG~-~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
|+.- -|+ .+.+||+++|+|.|+....+ |.-.+...-.+ .+.|..+. .-+.+++.+++.+++.
T Consensus 360 --~v~PS~~E~~gl~~lEAma~G~p~V~~~~gG~~e~v~~~~~~~~-~~~G~lv~-----~~d~~~la~~i~~~l~ 427 (466)
T PRK00654 360 --FLMPSRFEPCGLTQLYALRYGTLPIVRRTGGLADTVIDYNPEDG-EATGFVFD-----DFNAEDLLRALRRALE 427 (466)
T ss_pred --EEeCCCCCCchHHHHHHHHCCCCEEEeCCCCccceeecCCCCCC-CCceEEeC-----CCCHHHHHHHHHHHHH
Confidence 6643 233 37899999999999865432 21111111112 26788875 3478899999999875
No 122
>cd03791 GT1_Glycogen_synthase_DULL1_like This family is most closely related to the GT1 family of glycosyltransferases. Glycogen synthase catalyzes the formation and elongation of the alpha-1,4-glucose backbone using ADP-glucose, the second and key step of glycogen biosynthesis. This family includes starch synthases of plants, such as DULL1 in Zea mays and glycogen synthases of various organisms.
Probab=94.36 E-value=1.3 Score=45.00 Aligned_cols=136 Identities=12% Similarity=0.058 Sum_probs=73.2
Q ss_pred ceEEEecCCcccC-CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhcccCc
Q 045998 221 SVIYISFGSLLVL-SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHAAV 296 (408)
Q Consensus 221 ~vvyvs~GS~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~~v 296 (408)
..+++..|..... ..+.+.+.+..+.+.+.+++++ |..+......+ ..+.++..+|+.+..-.++. .+++.+++
T Consensus 296 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~lvi~-G~g~~~~~~~~-~~~~~~~~~~v~~~~~~~~~~~~~~~~~aDv 373 (476)
T cd03791 296 APLFGFVGRLTEQKGIDLLLEALPELLELGGQLVIL-GSGDPEYEEAL-RELAARYPGRVAVLIGYDEALAHLIYAGADF 373 (476)
T ss_pred CCEEEEEeeccccccHHHHHHHHHHHHHcCcEEEEE-ecCCHHHHHHH-HHHHHhCCCcEEEEEeCCHHHHHHHHHhCCE
Confidence 3456666776622 2233444444444445555543 43321100011 11222235677665333333 47888888
Q ss_pred ceEEecc---Cc-chHHHHHHcCCceeeccCCC--ChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 297 SCFLTHC---GW-NSTLETVAAGVPVIAYPEWT--DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 297 ~~fitHg---G~-~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
|+.-. |. .+.+||+++|+|.|+....+ |--.+.....+ .|.|..+.. -+.+++.+++.+++.
T Consensus 374 --~l~pS~~E~~gl~~lEAma~G~pvI~~~~gg~~e~v~~~~~~~~-~~~G~~~~~-----~~~~~l~~~i~~~l~ 441 (476)
T cd03791 374 --FLMPSRFEPCGLTQMYAMRYGTVPIVRATGGLADTVIDYNEDTG-EGTGFVFEG-----YNADALLAALRRALA 441 (476)
T ss_pred --EECCCCCCCCcHHHHHHhhCCCCCEECcCCCccceEeCCcCCCC-CCCeEEeCC-----CCHHHHHHHHHHHHH
Confidence 66431 22 37899999999999865543 22111111112 357888853 468999999999875
No 123
>TIGR02470 sucr_synth sucrose synthase. This model represents sucrose synthase, an enzyme that, despite its name, generally uses rather produces sucrose. Sucrose plus UDP (or ADP) becomes D-fructose plus UDP-glucose (or ADP-glucose), which is then available for cell wall (or starch) biosynthesis. The enzyme is homologous to sucrose phosphate synthase, which catalyzes the penultimate step in sucrose synthesis. Sucrose synthase is found, so far, exclusively in plants and cyanobacteria.
Probab=94.28 E-value=9.5 Score=41.26 Aligned_cols=80 Identities=13% Similarity=0.063 Sum_probs=51.8
Q ss_pred CCCeEEEecc-cH---HHHhcc-cC-cceEEecc---C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEee
Q 045998 276 KDRGLVVKWC-SQ---EKVLMH-AA-VSCFLTHC---G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMR 345 (408)
Q Consensus 276 ~~n~~v~~w~-pq---~~lL~h-~~-v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 345 (408)
.+++.+.++. +. ..++.+ ++ .++||.-. | -.+++||+++|+|+|+--..+ ....|.+ -..|..++
T Consensus 618 ~g~V~flG~~~~~~~~~elyr~iAd~adVfV~PS~~EpFGLvvLEAMAcGlPVVAT~~GG----~~EiV~d-g~tGfLVd 692 (784)
T TIGR02470 618 HGQIRWIGAQLNRVRNGELYRYIADTKGIFVQPALYEAFGLTVLEAMTCGLPTFATRFGG----PLEIIQD-GVSGFHID 692 (784)
T ss_pred CCeEEEccCcCCcccHHHHHHHhhccCcEEEECCcccCCCHHHHHHHHcCCCEEEcCCCC----HHHHhcC-CCcEEEeC
Confidence 4677777764 32 245543 22 12277432 2 348899999999999965443 4455665 46788885
Q ss_pred cCCCCCcCHHHHHHHHHHHh
Q 045998 346 NEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 346 ~~~~~~~~~~~l~~~i~~vl 365 (408)
. -+.+++.++|.+++
T Consensus 693 p-----~D~eaLA~aL~~ll 707 (784)
T TIGR02470 693 P-----YHGEEAAEKIVDFF 707 (784)
T ss_pred C-----CCHHHHHHHHHHHH
Confidence 3 46788999988876
No 124
>PHA01630 putative group 1 glycosyl transferase
Probab=92.18 E-value=12 Score=36.24 Aligned_cols=79 Identities=11% Similarity=0.122 Sum_probs=46.3
Q ss_pred ecccHH---HHhcccCcceEEec-cC-cchHHHHHHcCCceeeccCCC--Chhh---hHHhhhc----------eeeeEE
Q 045998 283 KWCSQE---KVLMHAAVSCFLTH-CG-WNSTLETVAAGVPVIAYPEWT--DQPT---DAKLLVD----------VFKIGV 342 (408)
Q Consensus 283 ~w~pq~---~lL~h~~v~~fitH-gG-~~s~~eal~~GvP~i~~P~~~--DQ~~---na~~v~~----------~~g~G~ 342 (408)
.++|+. .+++.+++-++-++ .| -.+++||+++|+|+|+.-..+ |.-. |...+.. ..++|.
T Consensus 196 ~~v~~~~l~~~y~~aDv~v~pS~~E~fgl~~lEAMA~G~PVIas~~gg~~E~i~~~~ng~lv~~~~~~~~~~~~~~~~G~ 275 (331)
T PHA01630 196 TPLPDDDIYSLFAGCDILFYPVRGGAFEIPVIEALALGLDVVVTEKGAWSEWVLSNLDVYWIKSGRKPKLWYTNPIHVGY 275 (331)
T ss_pred ccCCHHHHHHHHHhCCEEEECCccccCChHHHHHHHcCCCEEEeCCCCchhhccCCCceEEeeecccccccccCCccccc
Confidence 346655 46889999333233 22 458999999999999976543 3222 2211110 012444
Q ss_pred EeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 343 RMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 343 ~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
.+. .+.+++.+++.+++.+
T Consensus 276 ~v~------~~~~~~~~~ii~~l~~ 294 (331)
T PHA01630 276 FLD------PDIEDAYQKLLEALAN 294 (331)
T ss_pred ccC------CCHHHHHHHHHHHHhC
Confidence 442 2567777778788875
No 125
>PLN02846 digalactosyldiacylglycerol synthase
Probab=92.14 E-value=3.7 Score=41.62 Aligned_cols=73 Identities=15% Similarity=0.088 Sum_probs=52.0
Q ss_pred EEecccHHHHhcccCcceEEeccC----cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHH
Q 045998 281 VVKWCSQEKVLMHAAVSCFLTHCG----WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQ 356 (408)
Q Consensus 281 v~~w~pq~~lL~h~~v~~fitHgG----~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~ 356 (408)
+.++.+..+++...++ ||.-+- -++++||+++|+|+|+.-..+ | ..+.+ -+.|.... +.++
T Consensus 288 f~G~~~~~~~~~~~Dv--Fv~pS~~Et~g~v~lEAmA~G~PVVa~~~~~----~-~~v~~-~~ng~~~~-------~~~~ 352 (462)
T PLN02846 288 YPGRDHADPLFHDYKV--FLNPSTTDVVCTTTAEALAMGKIVVCANHPS----N-EFFKQ-FPNCRTYD-------DGKG 352 (462)
T ss_pred ECCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCcEEEecCCC----c-ceeec-CCceEecC-------CHHH
Confidence 3466666779999998 887643 568899999999999986443 2 33443 34444432 5789
Q ss_pred HHHHHHHHhcCC
Q 045998 357 VQRCIDEATQGL 368 (408)
Q Consensus 357 l~~~i~~vl~~~ 368 (408)
+.+++.++|.++
T Consensus 353 ~a~ai~~~l~~~ 364 (462)
T PLN02846 353 FVRATLKALAEE 364 (462)
T ss_pred HHHHHHHHHccC
Confidence 999999999753
No 126
>TIGR03713 acc_sec_asp1 accessory Sec system protein Asp1. This protein is designated Asp1 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=91.71 E-value=1.8 Score=44.58 Aligned_cols=74 Identities=14% Similarity=0.229 Sum_probs=58.2
Q ss_pred CCeEEEeccc--HH-HHhcccCcceEEecc---CcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCC
Q 045998 277 DRGLVVKWCS--QE-KVLMHAAVSCFLTHC---GWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDG 350 (408)
Q Consensus 277 ~n~~v~~w~p--q~-~lL~h~~v~~fitHg---G~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 350 (408)
.++.+.++.. +. .++.++.+ +|.=+ |.++.+||+.+|+|+| .......|+. ..-|..+.
T Consensus 409 ~~v~f~gy~~e~dl~~~~~~arl--~id~s~~eg~~~~ieAiS~GiPqI-------nyg~~~~V~d-~~NG~li~----- 473 (519)
T TIGR03713 409 ERIAFTTLTNEEDLISALDKLRL--IIDLSKEPDLYTQISGISAGIPQI-------NKVETDYVEH-NKNGYIID----- 473 (519)
T ss_pred cEEEEEecCCHHHHHHHHhhheE--EEECCCCCChHHHHHHHHcCCCee-------ecCCceeeEc-CCCcEEeC-----
Confidence 4667778877 33 67888888 87755 6779999999999999 4445566776 67787773
Q ss_pred CcCHHHHHHHHHHHhcC
Q 045998 351 TLSIQQVQRCIDEATQG 367 (408)
Q Consensus 351 ~~~~~~l~~~i~~vl~~ 367 (408)
+..+|.+++..+|.+
T Consensus 474 --d~~~l~~al~~~L~~ 488 (519)
T TIGR03713 474 --DISELLKALDYYLDN 488 (519)
T ss_pred --CHHHHHHHHHHHHhC
Confidence 679999999999987
No 127
>PF13524 Glyco_trans_1_2: Glycosyl transferases group 1
Probab=91.56 E-value=2.8 Score=31.81 Aligned_cols=69 Identities=16% Similarity=0.154 Sum_probs=44.8
Q ss_pred ccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceee-eEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 045998 302 HCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFK-IGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAW 380 (408)
Q Consensus 302 HgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 380 (408)
+|-..-+.|++++|+|+|.-.. ......+.+ | -++.. . +.+++.++|+.+++++ +..++-+++-
T Consensus 9 ~~~~~r~~E~~a~G~~vi~~~~----~~~~~~~~~--~~~~~~~-----~--~~~el~~~i~~ll~~~--~~~~~ia~~a 73 (92)
T PF13524_consen 9 DGPNMRIFEAMACGTPVISDDS----PGLREIFED--GEHIITY-----N--DPEELAEKIEYLLENP--EERRRIAKNA 73 (92)
T ss_pred CCCchHHHHHHHCCCeEEECCh----HHHHHHcCC--CCeEEEE-----C--CHHHHHHHHHHHHCCH--HHHHHHHHHH
Confidence 4445678999999999999855 333333433 4 33333 2 8899999999999983 3344444444
Q ss_pred HHHHH
Q 045998 381 KEAAK 385 (408)
Q Consensus 381 ~~~~~ 385 (408)
++.++
T Consensus 74 ~~~v~ 78 (92)
T PF13524_consen 74 RERVL 78 (92)
T ss_pred HHHHH
Confidence 44443
No 128
>TIGR02919 accessory Sec system glycosyltransferase GtfB. Members of this protein family are found only in Gram-positive bacteria of the Firmicutes lineage, including several species of Staphylococcus, Streptococcus, and Lactobacillus.
Probab=91.44 E-value=3.2 Score=41.78 Aligned_cols=138 Identities=8% Similarity=0.144 Sum_probs=86.8
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhC-CCCEEEEEecCCcccccccchhhhhhcCCCeEEE-eccc-H-HHHhccc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINT-KRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVV-KWCS-Q-EKVLMHA 294 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~-~w~p-q-~~lL~h~ 294 (408)
++.+++++ +.+.++.+.....+. +.+|=...+..-.. .| ..+ ++. +|+.+. ++.+ + .+++..+
T Consensus 282 ~~~~l~~t-------~s~~I~~i~~Lv~~lPd~~f~Iga~te~s~---kL-~~L-~~y-~nvvly~~~~~~~l~~ly~~~ 348 (438)
T TIGR02919 282 RKQALILT-------NSDQIEHLEEIVQALPDYHFHIAALTEMSS---KL-MSL-DKY-DNVKLYPNITTQKIQELYQTC 348 (438)
T ss_pred cccEEEEC-------CHHHHHHHHHHHHhCCCcEEEEEecCcccH---HH-HHH-Hhc-CCcEEECCcChHHHHHHHHhc
Confidence 44577776 366677777776664 45554433322011 22 122 234 666665 6677 3 3799999
Q ss_pred CcceEEeccC--cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHH
Q 045998 295 AVSCFLTHCG--WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQ 372 (408)
Q Consensus 295 ~v~~fitHgG--~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~ 372 (408)
++-+-|+|+. ..++.||+.+|+|+++.=.... +...+.. |..+. .-+.+++.++|.++|.+. +.
T Consensus 349 dlyLdin~~e~~~~al~eA~~~G~pI~afd~t~~---~~~~i~~----g~l~~-----~~~~~~m~~~i~~lL~d~--~~ 414 (438)
T TIGR02919 349 DIYLDINHGNEILNAVRRAFEYNLLILGFEETAH---NRDFIAS----ENIFE-----HNEVDQLISKLKDLLNDP--NQ 414 (438)
T ss_pred cEEEEccccccHHHHHHHHHHcCCcEEEEecccC---CcccccC----Cceec-----CCCHHHHHHHHHHHhcCH--HH
Confidence 9988899977 7799999999999999743321 1122221 44443 346799999999999882 34
Q ss_pred HHHHHHHHHHH
Q 045998 373 MKKRAVAWKEA 383 (408)
Q Consensus 373 ~~~~a~~l~~~ 383 (408)
++++..+-++.
T Consensus 415 ~~~~~~~q~~~ 425 (438)
T TIGR02919 415 FRELLEQQREH 425 (438)
T ss_pred HHHHHHHHHHH
Confidence 56555554444
No 129
>TIGR02400 trehalose_OtsA alpha,alpha-trehalose-phosphate synthase [UDP-forming]. This enzyme catalyzes the key, penultimate step in biosynthesis of trehalose, a compatible solute made as an osmoprotectant in some species in all three domains of life. The gene symbol OtsA stands for osmotically regulated trehalose synthesis A. Trehalose helps protect against both osmotic and thermal stresses, and is made from two glucose subunits. This model excludes glucosylglycerol-phosphate synthase, an enzyme of an analogous osmoprotectant system in many cyanobacterial strains. This model does not identify archaeal examples, as they are more divergent than glucosylglycerol-phosphate synthase. Sequences that score in the gray zone between the trusted and noise cutoffs include a number of yeast multidomain proteins in which the N-terminal domain may be functionally equivalent to this family. The gray zone also includes the OtsA of Cornyebacterium glutamicum (and related species), shown to be responsib
Probab=91.34 E-value=2.7 Score=42.65 Aligned_cols=103 Identities=18% Similarity=0.141 Sum_probs=70.1
Q ss_pred ecccHH---HHhcccCcceEEe---ccCcc-hHHHHHHcCCc----eeeccCCCChhhhHHhhhceeeeEEEeecCCCCC
Q 045998 283 KWCSQE---KVLMHAAVSCFLT---HCGWN-STLETVAAGVP----VIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGT 351 (408)
Q Consensus 283 ~w~pq~---~lL~h~~v~~fit---HgG~~-s~~eal~~GvP----~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 351 (408)
+.+++. ++++.+++ |+. +=|+| ++.||+++|+| +|+--+.+-.. . .+-|+.++ .
T Consensus 342 ~~~~~~el~aly~aaDv--~vv~S~~EG~~Lv~lEamA~g~P~~g~vVlS~~~G~~~----~----l~~gllVn-----P 406 (456)
T TIGR02400 342 RSYDREELMALYRAADV--GLVTPLRDGMNLVAKEYVAAQDPKDGVLILSEFAGAAQ----E----LNGALLVN-----P 406 (456)
T ss_pred CCCCHHHHHHHHHhCcE--EEECccccccCccHHHHHHhcCCCCceEEEeCCCCChH----H----hCCcEEEC-----C
Confidence 455666 45788888 775 34655 67899999999 66655444221 1 22466664 4
Q ss_pred cCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 352 LSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 352 ~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
.+.+++.++|.++++.+ .+..+++.+++++.+.+ -+.....++|+++|.
T Consensus 407 ~d~~~lA~aI~~aL~~~-~~er~~r~~~~~~~v~~-----~~~~~W~~~~l~~l~ 455 (456)
T TIGR02400 407 YDIDGMADAIARALTMP-LEEREERHRAMMDKLRK-----NDVQRWREDFLSDLN 455 (456)
T ss_pred CCHHHHHHHHHHHHcCC-HHHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 57899999999999753 13556666666666533 677888999998875
No 130
>PLN02316 synthase/transferase
Probab=90.85 E-value=15 Score=41.11 Aligned_cols=103 Identities=13% Similarity=0.070 Sum_probs=62.9
Q ss_pred CCCeEEEecccHH---HHhcccCcceEEecc---C-cchHHHHHHcCCceeeccCCC--ChhhhHH----h--hhceeee
Q 045998 276 KDRGLVVKWCSQE---KVLMHAAVSCFLTHC---G-WNSTLETVAAGVPVIAYPEWT--DQPTDAK----L--LVDVFKI 340 (408)
Q Consensus 276 ~~n~~v~~w~pq~---~lL~h~~v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~--DQ~~na~----~--v~~~~g~ 340 (408)
++++.+....+.. .+++.+++ |+.-. | -.+.+||+++|+|.|+-...+ |.-.... . ....-+.
T Consensus 899 ~~rV~f~g~~de~lah~iyaaADi--flmPS~~EP~GLvqLEAMa~GtppVvs~vGGL~DtV~d~d~~~~~~~~~g~~~t 976 (1036)
T PLN02316 899 HDRARLCLTYDEPLSHLIYAGADF--ILVPSIFEPCGLTQLTAMRYGSIPVVRKTGGLFDTVFDVDHDKERAQAQGLEPN 976 (1036)
T ss_pred CCeEEEEecCCHHHHHHHHHhCcE--EEeCCcccCccHHHHHHHHcCCCeEEEcCCCcHhhccccccccccccccccCCc
Confidence 4567665444443 58999998 77532 1 348899999999888765433 2221110 0 0000146
Q ss_pred EEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhc
Q 045998 341 GVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALED 390 (408)
Q Consensus 341 G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~ 390 (408)
|..+. ..+.+.|..+|.+.+.. |.+....+++..++++..
T Consensus 977 Gflf~-----~~d~~aLa~AL~raL~~-----~~~~~~~~~~~~r~~m~~ 1016 (1036)
T PLN02316 977 GFSFD-----GADAAGVDYALNRAISA-----WYDGRDWFNSLCKRVMEQ 1016 (1036)
T ss_pred eEEeC-----CCCHHHHHHHHHHHHhh-----hhhhHHHHHHHHHHHHHh
Confidence 87774 45788999999999864 344445556666665544
No 131
>COG0763 LpxB Lipid A disaccharide synthetase [Cell envelope biogenesis, outer membrane]
Probab=90.44 E-value=8 Score=37.78 Aligned_cols=248 Identities=13% Similarity=0.044 Sum_probs=125.6
Q ss_pred cccceEEccchhhccHHHHHHhhcc---CC-ceeeCCCCCccccCCC--------------CC-----------CCCCCC
Q 045998 146 DKVKWILGSSFYELEENVVASMATF---TP-IIPVGPLVSPFMLGKQ--------------EN-----------ATAPSL 196 (408)
Q Consensus 146 ~~~~~~lvnt~~~le~~~~~~~~~~---~p-~~~vGpl~~~~~~~~~--------------~~-----------~~~~g~ 196 (408)
.+.|.++.-.+++|-......++.. .| ++||-|-+|-=.+++. |- .+-.|.
T Consensus 84 ~kpD~~i~IDsPdFnl~vak~lrk~~p~i~iihYV~PsVWAWr~~Ra~~i~~~~D~lLailPFE~~~y~k~g~~~~yVGH 163 (381)
T COG0763 84 NKPDVLILIDSPDFNLRVAKKLRKAGPKIKIIHYVSPSVWAWRPKRAVKIAKYVDHLLAILPFEPAFYDKFGLPCTYVGH 163 (381)
T ss_pred cCCCEEEEeCCCCCchHHHHHHHHhCCCCCeEEEECcceeeechhhHHHHHHHhhHeeeecCCCHHHHHhcCCCeEEeCC
Confidence 4577777777888877777777654 23 7888888753211110 00 011243
Q ss_pred CCccccc-ccchhhhhhhhccCCCCceEEEecCCcccC---CHHHHHHHHHHHHh--CCCCEEEEEecCCcccccccchh
Q 045998 197 DMWSTAE-ECSCIEIHQWLNKKPPSSVIYISFGSLLVL---SQNQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAG 270 (408)
Q Consensus 197 ~~~~~~~-~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~---~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~ 270 (408)
.+.+..+ ..-.+...+-+....++.++.+--||-..- -...+...++.|.. .+.+|+.-+-..... .+-..
T Consensus 164 pl~d~i~~~~~r~~ar~~l~~~~~~~~lalLPGSR~sEI~rl~~~f~~a~~~l~~~~~~~~~vlp~~~~~~~---~~~~~ 240 (381)
T COG0763 164 PLADEIPLLPDREAAREKLGIDADEKTLALLPGSRRSEIRRLLPPFVQAAQELKARYPDLKFVLPLVNAKYR---RIIEE 240 (381)
T ss_pred hhhhhccccccHHHHHHHhCCCCCCCeEEEecCCcHHHHHHHHHHHHHHHHHHHhhCCCceEEEecCcHHHH---HHHHH
Confidence 3332211 011222333343344567899999996631 12223333444442 456777755443211 11111
Q ss_pred hhhhcC--CCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCC-ChhhhHHhhhceeeeEEEeec-
Q 045998 271 FLEETK--DRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWT-DQPTDAKLLVDVFKIGVRMRN- 346 (408)
Q Consensus 271 ~~~~~~--~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~-DQ~~na~~v~~~~g~G~~l~~- 346 (408)
...... -+..+.+- --..++..+++ .+.-+|. -++|+..+|+|||+.=-.. =-+.-+++..+ ....-..+.
T Consensus 241 ~~~~~~~~~~~~~~~~-~~~~a~~~aD~--al~aSGT-~tLE~aL~g~P~Vv~Yk~~~it~~iak~lvk-~~yisLpNIi 315 (381)
T COG0763 241 ALKWEVAGLSLILIDG-EKRKAFAAADA--ALAASGT-ATLEAALAGTPMVVAYKVKPITYFIAKRLVK-LPYVSLPNIL 315 (381)
T ss_pred HhhccccCceEEecCc-hHHHHHHHhhH--HHHhccH-HHHHHHHhCCCEEEEEeccHHHHHHHHHhcc-CCcccchHHh
Confidence 111110 11222221 12246777777 7777775 4689999999999851110 01223344443 221111110
Q ss_pred -CC-------CCCcCHHHHHHHHHHHhcCC-cHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 045998 347 -EE-------DGTLSIQQVQRCIDEATQGL-NATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEI 405 (408)
Q Consensus 347 -~~-------~~~~~~~~l~~~i~~vl~~~-~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 405 (408)
++ +...+++.|.+++.+++.|+ +...+++..+++.+.+ +.+++++...+.+++.+
T Consensus 316 ~~~~ivPEliq~~~~pe~la~~l~~ll~~~~~~~~~~~~~~~l~~~l----~~~~~~e~aA~~vl~~~ 379 (381)
T COG0763 316 AGREIVPELIQEDCTPENLARALEELLLNGDRREALKEKFRELHQYL----REDPASEIAAQAVLELL 379 (381)
T ss_pred cCCccchHHHhhhcCHHHHHHHHHHHhcChHhHHHHHHHHHHHHHHH----cCCcHHHHHHHHHHHHh
Confidence 00 36788999999999999884 2234555555555554 44445555555555443
No 132
>PRK10125 putative glycosyl transferase; Provisional
Probab=90.41 E-value=5.3 Score=39.80 Aligned_cols=99 Identities=12% Similarity=0.050 Sum_probs=60.6
Q ss_pred HHHHHHHHHhCCCCE-EEEEecCCcccccccchhhhhhcCCCeEEEecc-cH---HHHhcccCcceEEecc----CcchH
Q 045998 238 IDSIAAALINTKRPF-LWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC-SQ---EKVLMHAAVSCFLTHC----GWNST 308 (408)
Q Consensus 238 ~~~~~~al~~~~~~~-iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~-pq---~~lL~h~~v~~fitHg----G~~s~ 308 (408)
...+++++...+..+ ++.+|..... . ..++...++. ++ ..+++.+++ ||.-. --+++
T Consensus 258 ~~~li~A~~~l~~~~~L~ivG~g~~~----~--------~~~v~~~g~~~~~~~l~~~y~~aDv--fV~pS~~Egfp~vi 323 (405)
T PRK10125 258 DQQLVREMMALGDKIELHTFGKFSPF----T--------AGNVVNHGFETDKRKLMSALNQMDA--LVFSSRVDNYPLIL 323 (405)
T ss_pred HHHHHHHHHhCCCCeEEEEEcCCCcc----c--------ccceEEecCcCCHHHHHHHHHhCCE--EEECCccccCcCHH
Confidence 466788887765443 4555543211 1 1455555554 33 346777888 77543 24578
Q ss_pred HHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHH
Q 045998 309 LETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCI 361 (408)
Q Consensus 309 ~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i 361 (408)
+||+++|+|+|+-...+ ....+.. +.|+.+.. -+.++|.+++
T Consensus 324 lEAmA~G~PVVat~~gG----~~Eiv~~--~~G~lv~~-----~d~~~La~~~ 365 (405)
T PRK10125 324 CEALSIGVPVIATHSDA----AREVLQK--SGGKTVSE-----EEVLQLAQLS 365 (405)
T ss_pred HHHHHcCCCEEEeCCCC----hHHhEeC--CcEEEECC-----CCHHHHHhcc
Confidence 99999999999998765 1223333 57888854 3667777643
No 133
>TIGR02193 heptsyl_trn_I lipopolysaccharide heptosyltransferase I. This family consists of examples of ADP-heptose:LPS heptosyltransferase I, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=89.68 E-value=4.5 Score=38.67 Aligned_cols=142 Identities=12% Similarity=0.090 Sum_probs=80.5
Q ss_pred hhhccCCCCceEEEecCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEec--cc
Q 045998 212 QWLNKKPPSSVIYISFGSLL---VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKW--CS 286 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w--~p 286 (408)
+++....+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++..+..... ..-+.+.+..+.. .+.+- ++
T Consensus 171 ~~~~~~~~~~~i~i~~gas~~~K~wp~e~~~~l~~~l~~~~~~~vl~~g~~~e~---~~~~~i~~~~~~~-~l~g~~sL~ 246 (319)
T TIGR02193 171 AFLGHALPAPYAVLLHATSRDDKTWPEERWRELARLLLARGLQIVLPWGNDAEK---QRAERIAEALPGA-VVLPKMSLA 246 (319)
T ss_pred hhhhccCCCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHCCCeEEEeCCCHHHH---HHHHHHHhhCCCC-eecCCCCHH
Confidence 44443334556666666544 3577889999999987788877665543211 1112232222222 33332 34
Q ss_pred HH-HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEE-eecCCCCCcCHHHHHHHHHHH
Q 045998 287 QE-KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVR-MRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 287 q~-~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~-l~~~~~~~~~~~~l~~~i~~v 364 (408)
|. ++++++++ ||+.- .|-++=|.+.|+|+|++ ++ +.+..+..- +|-... +....-..++.+++.++++++
T Consensus 247 el~ali~~a~l--~I~~D-Sgp~HlAaa~g~P~i~l--fg--~t~p~~~~P-~~~~~~~~~~~~~~~I~~~~V~~ai~~~ 318 (319)
T TIGR02193 247 EVAALLAGADA--VVGVD-TGLTHLAAALDKPTVTL--YG--ATDPGRTGG-YGKPNVALLGESGANPTPDEVLAALEEL 318 (319)
T ss_pred HHHHHHHcCCE--EEeCC-ChHHHHHHHcCCCEEEE--EC--CCCHhhccc-CCCCceEEccCccCCCCHHHHHHHHHhh
Confidence 44 78999998 88874 56777788899999986 22 111111111 221111 111012678999999999876
Q ss_pred h
Q 045998 365 T 365 (408)
Q Consensus 365 l 365 (408)
|
T Consensus 319 ~ 319 (319)
T TIGR02193 319 L 319 (319)
T ss_pred C
Confidence 4
No 134
>PLN02501 digalactosyldiacylglycerol synthase
Probab=89.37 E-value=5.9 Score=42.04 Aligned_cols=76 Identities=16% Similarity=0.053 Sum_probs=52.3
Q ss_pred CeEEEecccHH-HHhcccCcceEEecc---C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCc
Q 045998 278 RGLVVKWCSQE-KVLMHAAVSCFLTHC---G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTL 352 (408)
Q Consensus 278 n~~v~~w~pq~-~lL~h~~v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~ 352 (408)
++.+.++.++. .+++.+++ ||.-+ | -++++||+++|+|+|+....+... +.. -+.| .+. -
T Consensus 602 ~V~FLG~~dd~~~lyasaDV--FVlPS~sEgFGlVlLEAMA~GlPVVATd~pG~e~-----V~~-g~nG-ll~------~ 666 (794)
T PLN02501 602 NLNFLKGRDHADDSLHGYKV--FINPSISDVLCTATAEALAMGKFVVCADHPSNEF-----FRS-FPNC-LTY------K 666 (794)
T ss_pred EEEecCCCCCHHHHHHhCCE--EEECCCcccchHHHHHHHHcCCCEEEecCCCCce-----Eee-cCCe-Eec------C
Confidence 35556777655 58999998 76532 2 568899999999999987655321 222 2233 232 2
Q ss_pred CHHHHHHHHHHHhcCC
Q 045998 353 SIQQVQRCIDEATQGL 368 (408)
Q Consensus 353 ~~~~l~~~i~~vl~~~ 368 (408)
+.+++.++|.+++.++
T Consensus 667 D~EafAeAI~~LLsd~ 682 (794)
T PLN02501 667 TSEDFVAKVKEALANE 682 (794)
T ss_pred CHHHHHHHHHHHHhCc
Confidence 5899999999999874
No 135
>PLN02939 transferase, transferring glycosyl groups
Probab=89.18 E-value=17 Score=40.15 Aligned_cols=84 Identities=11% Similarity=0.079 Sum_probs=54.9
Q ss_pred CCCeEEEecccHH---HHhcccCcceEEecc---C-cchHHHHHHcCCceeeccCCC--Chhhh--HHhhhceeeeEEEe
Q 045998 276 KDRGLVVKWCSQE---KVLMHAAVSCFLTHC---G-WNSTLETVAAGVPVIAYPEWT--DQPTD--AKLLVDVFKIGVRM 344 (408)
Q Consensus 276 ~~n~~v~~w~pq~---~lL~h~~v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~--DQ~~n--a~~v~~~~g~G~~l 344 (408)
.+++.+..+.+.. .+++.+++ ||.-. | -.+++||+++|+|.|+....+ |-..+ ...+...-+.|..+
T Consensus 836 ~drV~FlG~~de~lah~IYAaADI--FLmPSr~EPfGLvqLEAMAyGtPPVVs~vGGL~DtV~d~d~e~i~~eg~NGfLf 913 (977)
T PLN02939 836 NNNIRLILKYDEALSHSIYAASDM--FIIPSMFEPCGLTQMIAMRYGSVPIVRKTGGLNDSVFDFDDETIPVELRNGFTF 913 (977)
T ss_pred CCeEEEEeccCHHHHHHHHHhCCE--EEECCCccCCcHHHHHHHHCCCCEEEecCCCCcceeecCCccccccCCCceEEe
Confidence 4678888877764 58999999 77532 2 347899999999999876544 22211 11111112567776
Q ss_pred ecCCCCCcCHHHHHHHHHHHhc
Q 045998 345 RNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 345 ~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
. .-+.+++..+|.+++.
T Consensus 914 ~-----~~D~eaLa~AL~rAL~ 930 (977)
T PLN02939 914 L-----TPDEQGLNSALERAFN 930 (977)
T ss_pred c-----CCCHHHHHHHHHHHHH
Confidence 4 3478888888888764
No 136
>PLN03063 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=88.31 E-value=6.9 Score=42.67 Aligned_cols=98 Identities=19% Similarity=0.207 Sum_probs=62.8
Q ss_pred HHhcccCcceEEec---cCcc-hHHHHHHcCCc---eeeccCCCChhhhHHhhhceee-eEEEeecCCCCCcCHHHHHHH
Q 045998 289 KVLMHAAVSCFLTH---CGWN-STLETVAAGVP---VIAYPEWTDQPTDAKLLVDVFK-IGVRMRNEEDGTLSIQQVQRC 360 (408)
Q Consensus 289 ~lL~h~~v~~fitH---gG~~-s~~eal~~GvP---~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~ 360 (408)
++++-+++ |+.- -|+| .++|++++|+| .+++.-++ -.+.. .| .|+.++ ..+.+++.++
T Consensus 371 aly~~ADv--fvvtSlrEGmnLv~lEamA~g~p~~gvlVlSe~~---G~~~~----l~~~allVn-----P~D~~~lA~A 436 (797)
T PLN03063 371 ALYAITDV--MLVTSLRDGMNLVSYEFVACQKAKKGVLVLSEFA---GAGQS----LGAGALLVN-----PWNITEVSSA 436 (797)
T ss_pred HHHHhCCE--EEeCccccccCcchhhHheeecCCCCCEEeeCCc---Cchhh----hcCCeEEEC-----CCCHHHHHHH
Confidence 67888998 7744 4877 56799999999 33433221 11221 23 577775 4688999999
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 361 IDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 361 i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
|.++|+.. .+..+++.+++.+.+++ -+.....++|++.|.
T Consensus 437 I~~aL~m~-~~er~~r~~~~~~~v~~-----~~~~~Wa~~fl~~l~ 476 (797)
T PLN03063 437 IKEALNMS-DEERETRHRHNFQYVKT-----HSAQKWADDFMSELN 476 (797)
T ss_pred HHHHHhCC-HHHHHHHHHHHHHhhhh-----CCHHHHHHHHHHHHH
Confidence 99999832 13445555555555543 456677777777764
No 137
>cd01635 Glycosyltransferase_GTB_type Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. The acceptor molecule can be a lipid, a protein, a heterocyclic compound, or another carbohydrate residue. The structures of the formed glycoconjugates are extremely diverse, reflecting a wide range of biological functions. The members of this family share a common GTB topology, one of the two protein topologies observed for nucleotide-sugar-dependent glycosyltransferases. GTB proteins have distinct N- and C- terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=86.12 E-value=6.9 Score=34.23 Aligned_cols=49 Identities=31% Similarity=0.247 Sum_probs=36.9
Q ss_pred CCCeEEEecccH-H---HHhcccCcceEEeccC----cchHHHHHHcCCceeeccCCCC
Q 045998 276 KDRGLVVKWCSQ-E---KVLMHAAVSCFLTHCG----WNSTLETVAAGVPVIAYPEWTD 326 (408)
Q Consensus 276 ~~n~~v~~w~pq-~---~lL~h~~v~~fitHgG----~~s~~eal~~GvP~i~~P~~~D 326 (408)
..|+.+.++++. . .+++.+++ +++... -++++||+++|+|+|+-+..+.
T Consensus 160 ~~~v~~~~~~~~~~~~~~~~~~~di--~l~~~~~e~~~~~~~Eam~~g~pvi~s~~~~~ 216 (229)
T cd01635 160 LDRVIFLGGLDPEELLALLLAAADV--FVLPSLREGFGLVVLEAMACGLPVIATDVGGP 216 (229)
T ss_pred cccEEEeCCCCcHHHHHHHhhcCCE--EEecccccCcChHHHHHHhCCCCEEEcCCCCc
Confidence 478999988632 2 34444888 777665 6899999999999999876553
No 138
>cd03788 GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha,alpha-1,1-trehalose-6-phosphate from glucose-6-phosphate using a UDP-glucose donor. It is a key enzyme in the trehalose synthesis pathway. Trehalose is a nonreducing disaccharide present in a wide variety of organisms and may serve as a source of energy and carbon. It is characterized most notably in insect, plant, and microbial cells. Its production is often associated with a variety of stress conditions, including desiccation, dehydration, heat, cold, and oxidation. This family represents the catalytic domain of the TPS. Some members of this domain family coexist with a C-terminal trehalose phosphatase domain.
Probab=84.53 E-value=5.9 Score=40.21 Aligned_cols=103 Identities=18% Similarity=0.146 Sum_probs=63.5
Q ss_pred EecccHH---HHhcccCcceEEe---ccCcc-hHHHHHHcCCc----eeeccCCCChhhhHHhhhceeeeEEEeecCCCC
Q 045998 282 VKWCSQE---KVLMHAAVSCFLT---HCGWN-STLETVAAGVP----VIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDG 350 (408)
Q Consensus 282 ~~w~pq~---~lL~h~~v~~fit---HgG~~-s~~eal~~GvP----~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~ 350 (408)
.+++++. ++++.+++ ||. +-|+| +++||+++|+| +|+--..+-... ..-|+.++
T Consensus 346 ~g~v~~~el~~~y~~aDv--~v~pS~~Eg~~lv~lEAma~g~p~~g~vV~S~~~G~~~~--------~~~g~lv~----- 410 (460)
T cd03788 346 YRSLPREELAALYRAADV--ALVTPLRDGMNLVAKEYVACQDDDPGVLILSEFAGAAEE--------LSGALLVN----- 410 (460)
T ss_pred eCCCCHHHHHHHHHhccE--EEeCccccccCcccceeEEEecCCCceEEEeccccchhh--------cCCCEEEC-----
Confidence 4677776 45888888 663 34554 67999999999 554433221111 12355664
Q ss_pred CcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 045998 351 TLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEI 405 (408)
Q Consensus 351 ~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 405 (408)
..+.+++.++|.++++++. +..++..++.++.+. .-+.....++|+++|
T Consensus 411 p~d~~~la~ai~~~l~~~~-~e~~~~~~~~~~~v~-----~~~~~~w~~~~l~~l 459 (460)
T cd03788 411 PYDIDEVADAIHRALTMPL-EERRERHRKLREYVR-----THDVQAWANSFLDDL 459 (460)
T ss_pred CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHH-----hCCHHHHHHHHHHhh
Confidence 3478999999999998631 223333333443332 256777888888776
No 139
>PF03033 Glyco_transf_28: Glycosyltransferase family 28 N-terminal domain; InterPro: IPR004276 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 28 GT28 from CAZY comprises enzymes with a number of known activities; 1,2-diacylglycerol 3-beta-galactosyltransferase (2.4.1.46 from EC); 1,2-diacylglycerol 3-beta-glucosyltransferase (2.4.1.157 from EC); beta-N-acetylglucosamine transferase (2.4.1 from EC).; GO: 0016758 transferase activity, transferring hexosyl groups, 0005975 carbohydrate metabolic process, 0030259 lipid glycosylation; PDB: 2IYF_B 2YJN_A 2P6P_A 1PNV_A 3H4T_A 3H4I_A 1PN3_B 3IA7_B 1NLM_B 1F0K_B ....
Probab=84.22 E-value=0.44 Score=39.35 Aligned_cols=32 Identities=22% Similarity=0.179 Sum_probs=25.9
Q ss_pred CccEEEECCCCCcHHHHHHHcCCCeEEEecch
Q 045998 61 KKSCIITNPFMPWVPDVAAEHKIPCAVLWIQA 92 (408)
Q Consensus 61 ~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~ 92 (408)
..|+++.+.....+..+|++++||++.....+
T Consensus 100 ~~~~i~~~~~~~~~~~vaE~~~iP~~~~~~~p 131 (139)
T PF03033_consen 100 ADDVIIAAPLAFAAALVAEQLGIPGVANRLFP 131 (139)
T ss_dssp ECCEECHHHHHTHHHHHHHHHTS-EEEEESSG
T ss_pred cchHHHhhhhcCccceeEhhhCchHHHHhhCC
Confidence 46788888878899999999999999876554
No 140
>PF04464 Glyphos_transf: CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase ; InterPro: IPR007554 Wall-associated teichoic acids are a heterogeneous class of phosphate-rich polymers that are covalently linked to the cell wall peptidoglycan of Gram-positive bacteria. They consist of a main chain of phosphodiester-linked polyols and/or sugar moieties attached to peptidoglycan via a linkage unit. CDP-glycerol:poly(glycerophosphate) glycerophosphotransferase is responsible for the polymerisation of the main chain of the teichoic acid by sequential transfer of glycerol-phosphate units from CDP-glycerol to the linkage unit lipid [].; GO: 0047355 CDP-glycerol glycerophosphotransferase activity, 0016020 membrane; PDB: 3L7K_B 3L7L_D 3L7I_A 3L7J_D 3L7M_D.
Probab=82.93 E-value=4 Score=39.94 Aligned_cols=145 Identities=14% Similarity=0.219 Sum_probs=78.6
Q ss_pred HHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEE-ecccHHHHhcccCcceEEeccCcchHHHHHHcCC
Q 045998 238 IDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVV-KWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGV 316 (408)
Q Consensus 238 ~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~-~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~Gv 316 (408)
.+.+. .+.+.+..+++...+.... ... .+ ....+++..+ +..+-.++|..+++ .||--. ..+.|.++.++
T Consensus 219 ~~~l~-~~~~~~~~li~k~Hp~~~~---~~~-~~-~~~~~~i~~~~~~~~~~~ll~~aDi--LITDyS-Si~fD~~~l~K 289 (369)
T PF04464_consen 219 FEKLN-FLLKNNYVLIIKPHPNMKK---KFK-DF-KEDNSNIIFVSDNEDIYDLLAAADI--LITDYS-SIIFDFLLLNK 289 (369)
T ss_dssp HHHHH-HHHTTTEEEEE--SHHHHT---T------TT-TTTEEE-TT-S-HHHHHHT-SE--EEESS--THHHHHGGGT-
T ss_pred HHHHH-HHhCCCcEEEEEeCchhhh---chh-hh-hccCCcEEECCCCCCHHHHHHhcCE--EEEech-hHHHHHHHhCC
Confidence 34444 5666666666654432111 110 00 1224677665 45567799999999 999874 47789999999
Q ss_pred ceeeccCCCChhhhHHhh----hceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 045998 317 PVIAYPEWTDQPTDAKLL----VDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGG 392 (408)
Q Consensus 317 P~i~~P~~~DQ~~na~~v----~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg 392 (408)
|+|....-.|.+.+.+-. .+ ...|..+ -+.++|.++|++++.+. ..++++.++..+.+-. ..+|.
T Consensus 290 Piify~~D~~~Y~~~rg~~~~~~~-~~pg~~~-------~~~~eL~~~i~~~~~~~--~~~~~~~~~~~~~~~~-~~Dg~ 358 (369)
T PF04464_consen 290 PIIFYQPDLEEYEKERGFYFDYEE-DLPGPIV-------YNFEELIEAIENIIENP--DEYKEKREKFRDKFFK-YNDGN 358 (369)
T ss_dssp -EEEE-TTTTTTTTTSSBSS-TTT-SSSS-EE-------SSHHHHHHHHTTHHHHH--HHTHHHHHHHHHHHST-T--S-
T ss_pred CEEEEeccHHHHhhccCCCCchHh-hCCCcee-------CCHHHHHHHHHhhhhCC--HHHHHHHHHHHHHhCC-CCCch
Confidence 999877655555332111 11 2333333 36799999999988752 4566666666666644 25566
Q ss_pred ChHHHHHHHH
Q 045998 393 SSDANINRFI 402 (408)
Q Consensus 393 ~s~~~~~~~v 402 (408)
+++|-++.++
T Consensus 359 s~eri~~~I~ 368 (369)
T PF04464_consen 359 SSERIVNYIF 368 (369)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHh
Confidence 6666665554
No 141
>PRK02797 4-alpha-L-fucosyltransferase; Provisional
Probab=81.48 E-value=41 Score=32.12 Aligned_cols=133 Identities=14% Similarity=0.092 Sum_probs=82.9
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHh---CCCCEEEEEecCCcccccccchhhh----hhcC-CCeEEE-ecccH---HH
Q 045998 222 VIYISFGSLLVLSQNQIDSIAAALIN---TKRPFLWVIRSQENKEGGVLRAGFL----EETK-DRGLVV-KWCSQ---EK 289 (408)
Q Consensus 222 vvyvs~GS~~~~~~~~~~~~~~al~~---~~~~~iw~~~~~~~~~~~~lp~~~~----~~~~-~n~~v~-~w~pq---~~ 289 (408)
-+-|=.|.....+.+.++ +++++.+ .+.+++.-++...... .--+.+. +-.+ +|+.+. +++|- .+
T Consensus 146 ~~tIlvGNSgd~SN~Hie-~L~~l~~~~~~~v~ii~PlsYp~gn~--~Yi~~V~~~~~~lF~~~~~~~L~e~l~f~eYl~ 222 (322)
T PRK02797 146 KMTILVGNSGDRSNRHIE-ALRALHQQFGDNVKIIVPMGYPANNQ--AYIEEVRQAGLALFGAENFQILTEKLPFDDYLA 222 (322)
T ss_pred ceEEEEeCCCCCcccHHH-HHHHHHHHhCCCeEEEEECCcCCCCH--HHHHHHHHHHHHhcCcccEEehhhhCCHHHHHH
Confidence 366667887765554443 3344433 4457777766631110 0001111 1123 677765 67764 47
Q ss_pred HhcccCcceEEec--cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHh
Q 045998 290 VLMHAAVSCFLTH--CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 290 lL~h~~v~~fitH--gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl 365 (408)
+|+.++++-|+++ =|.|++.-.++.|||++.- .+-+.+....+ .|+-+-.+. +.++...+.++=+++.
T Consensus 223 lL~~~Dl~~f~~~RQQgiGnl~lLi~~G~~v~l~---r~n~fwqdl~e--~gv~Vlf~~---d~L~~~~v~e~~rql~ 292 (322)
T PRK02797 223 LLRQCDLGYFIFARQQGIGTLCLLIQLGKPVVLS---RDNPFWQDLTE--QGLPVLFTG---DDLDEDIVREAQRQLA 292 (322)
T ss_pred HHHhCCEEEEeechhhHHhHHHHHHHCCCcEEEe---cCCchHHHHHh--CCCeEEecC---CcccHHHHHHHHHHHH
Confidence 9999999888876 4899999999999999986 34444544333 577765555 6788888877755544
No 142
>cd03789 GT1_LPS_heptosyltransferase Lipopolysaccharide heptosyltransferase is involved in the biosynthesis of lipooligosaccharide (LOS). Lipopolysaccharide (LPS) is a major component of the outer membrane of gram-negative bacteria. LPS heptosyltransferase transfers heptose molecules from ADP-heptose to 3-deoxy-D-manno-octulosonic acid (KDO), a part of the inner core component of LPS. This family belongs to the GT-B structural superfamily of glycoslytransferases, which have characteristic N- and C-terminal domains each containing a typical Rossmann fold. The two domains have high structural homology despite minimal sequence homology. The large cleft that separates the two domains includes the catalytic center and permits a high degree of flexibility.
Probab=81.21 E-value=6.3 Score=36.87 Aligned_cols=95 Identities=15% Similarity=0.152 Sum_probs=61.0
Q ss_pred CceEEEecCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhc-CCCeE-EEec--cc-HHHHh
Q 045998 220 SSVIYISFGSLL---VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEET-KDRGL-VVKW--CS-QEKVL 291 (408)
Q Consensus 220 ~~vvyvs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~-~~n~~-v~~w--~p-q~~lL 291 (408)
++.|.+..|+.. ..+.+.+.++++.|.+.+.++++..+..+.. .-+.+.+.. ..++. +.+- +. ...++
T Consensus 121 ~~~i~i~~~~~~~~k~w~~~~~~~l~~~l~~~~~~ivl~g~~~e~~----~~~~i~~~~~~~~~~~~~~~~~l~e~~~li 196 (279)
T cd03789 121 KPVVVLPPGASGPAKRWPAERFAALADRLLARGARVVLTGGPAERE----LAEEIAAALGGPRVVNLAGKTSLRELAALL 196 (279)
T ss_pred CCEEEECCCCCCccccCCHHHHHHHHHHHHHCCCEEEEEechhhHH----HHHHHHHhcCCCccccCcCCCCHHHHHHHH
Confidence 456777777764 4577899999999988888887764433221 112222222 12222 2222 22 34789
Q ss_pred cccCcceEEeccCcchHHHHHHcCCceeec
Q 045998 292 MHAAVSCFLTHCGWNSTLETVAAGVPVIAY 321 (408)
Q Consensus 292 ~h~~v~~fitHgG~~s~~eal~~GvP~i~~ 321 (408)
.++++ +|+.-. |.++=|.+.|+|++++
T Consensus 197 ~~~~l--~I~~Ds-g~~HlA~a~~~p~i~l 223 (279)
T cd03789 197 ARADL--VVTNDS-GPMHLAAALGTPTVAL 223 (279)
T ss_pred HhCCE--EEeeCC-HHHHHHHHcCCCEEEE
Confidence 99999 999864 6666677899999986
No 143
>TIGR02201 heptsyl_trn_III lipopolysaccharide heptosyltransferase III, putative. This family consists of examples of the putative ADP-heptose:LPS heptosyltransferase III, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria. This enzyme may be less widely distributed than heptosyltransferases I and II.
Probab=80.82 E-value=8.4 Score=37.28 Aligned_cols=105 Identities=14% Similarity=0.141 Sum_probs=65.5
Q ss_pred hhhccC-CCCceEEEecCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCC-CeE-EEec-
Q 045998 212 QWLNKK-PPSSVIYISFGSLL---VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKD-RGL-VVKW- 284 (408)
Q Consensus 212 ~~l~~~-~~~~vvyvs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~-n~~-v~~w- 284 (408)
+++... ..++.|.+..|+.. ..+.+.+.++++.|.+.+.++++.-+..+.+. .+-+.+.+..+. ++. +.+-
T Consensus 172 ~~l~~~~~~~~~i~i~p~a~~~~K~Wp~e~~~~l~~~l~~~~~~ivl~g~p~~~e~--~~~~~i~~~~~~~~~~~l~g~~ 249 (344)
T TIGR02201 172 ALLDEAGVGQNYIVIQPTSRWFFKCWDNDRFSALIDALHARGYEVVLTSGPDKDEL--AMVNEIAQGCQTPRVTSLAGKL 249 (344)
T ss_pred HHHHhcCCCCCEEEEeCCCCccccCCCHHHHHHHHHHHHhCCCeEEEecCCCHHHH--HHHHHHHhhCCCCcccccCCCC
Confidence 445432 14467778888765 35778899999999877888776644321110 111222222221 221 2332
Q ss_pred -ccHH-HHhcccCcceEEeccCcchHHHHHHcCCceeec
Q 045998 285 -CSQE-KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAY 321 (408)
Q Consensus 285 -~pq~-~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~ 321 (408)
+.+. ++++++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 250 sL~el~ali~~a~l--~Vs~-DSGp~HlAaA~g~p~v~L 285 (344)
T TIGR02201 250 TLPQLAALIDHARL--FIGV-DSVPMHMAAALGTPLVAL 285 (344)
T ss_pred CHHHHHHHHHhCCE--EEec-CCHHHHHHHHcCCCEEEE
Confidence 3333 78999999 9998 677888899999999986
No 144
>PF06258 Mito_fiss_Elm1: Mitochondrial fission ELM1; InterPro: IPR009367 This family consists of several hypothetical eukaryotic and prokaryotic proteins. The function of this family is unknown.
Probab=80.42 E-value=53 Score=31.46 Aligned_cols=60 Identities=17% Similarity=0.015 Sum_probs=42.3
Q ss_pred ccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhh---hHHhhhceeeeEEEeec
Q 045998 285 CSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPT---DAKLLVDVFKIGVRMRN 346 (408)
Q Consensus 285 ~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~---na~~v~~~~g~G~~l~~ 346 (408)
=|....|+.++. .+||---.+.+.||+..|+|+.++|+-.-... -...+.+ .|.-..+..
T Consensus 220 nPy~~~La~ad~-i~VT~DSvSMvsEA~~tG~pV~v~~l~~~~~r~~r~~~~L~~-~g~~r~~~~ 282 (311)
T PF06258_consen 220 NPYLGFLAAADA-IVVTEDSVSMVSEAAATGKPVYVLPLPGRSGRFRRFHQSLEE-RGAVRPFTG 282 (311)
T ss_pred CcHHHHHHhCCE-EEEcCccHHHHHHHHHcCCCEEEecCCCcchHHHHHHHHHHH-CCCEEECCC
Confidence 467788999886 45666668889999999999999998762111 2234555 566666553
No 145
>PRK14099 glycogen synthase; Provisional
Probab=79.77 E-value=44 Score=34.19 Aligned_cols=86 Identities=12% Similarity=0.084 Sum_probs=48.0
Q ss_pred cCCCe-EEEecccHH-HHh-cccCcceEEec---cC-cchHHHHHHcCCceeeccCCC--ChhhhHHhhhce--eeeEEE
Q 045998 275 TKDRG-LVVKWCSQE-KVL-MHAAVSCFLTH---CG-WNSTLETVAAGVPVIAYPEWT--DQPTDAKLLVDV--FKIGVR 343 (408)
Q Consensus 275 ~~~n~-~v~~w~pq~-~lL-~h~~v~~fitH---gG-~~s~~eal~~GvP~i~~P~~~--DQ~~na~~v~~~--~g~G~~ 343 (408)
.++++ .+.+|-.+. .++ +.+++ |+.- =| -.+.+||+++|+|.|+....+ |--.+.....+. -+.|..
T Consensus 348 ~~~~v~~~~G~~~~l~~~~~a~aDi--fv~PS~~E~fGl~~lEAma~G~ppVvs~~GGl~d~V~~~~~~~~~~~~~~G~l 425 (485)
T PRK14099 348 YPGQIGVVIGYDEALAHLIQAGADA--LLVPSRFEPCGLTQLCALRYGAVPVVARVGGLADTVVDANEMAIATGVATGVQ 425 (485)
T ss_pred CCCCEEEEeCCCHHHHHHHHhcCCE--EEECCccCCCcHHHHHHHHCCCCcEEeCCCCccceeecccccccccCCCceEE
Confidence 34555 455773332 233 45777 7752 23 347789999997766654322 221111101100 157888
Q ss_pred eecCCCCCcCHHHHHHHHHH---HhcC
Q 045998 344 MRNEEDGTLSIQQVQRCIDE---ATQG 367 (408)
Q Consensus 344 l~~~~~~~~~~~~l~~~i~~---vl~~ 367 (408)
+. .-+.+++.+++.+ ++.+
T Consensus 426 ~~-----~~d~~~La~ai~~a~~l~~d 447 (485)
T PRK14099 426 FS-----PVTADALAAALRKTAALFAD 447 (485)
T ss_pred eC-----CCCHHHHHHHHHHHHHHhcC
Confidence 75 3478999999987 5555
No 146
>PF07429 Glyco_transf_56: 4-alpha-L-fucosyltransferase glycosyl transferase group 56; InterPro: IPR009993 This family contains the bacterial enzyme 4-alpha-L-fucosyltransferase (Fuc4NAc transferase) (approximately 360 residues long). This catalyses the synthesis of Fuc4NAc-ManNAcA-GlcNAc-PP-Und (lipid III) as part of the biosynthetic pathway of enterobacterial common antigen (ECA), a polysaccharide comprised of the trisaccharide repeat unit Fuc4NAc-ManNAcA-GlcNAc [].; GO: 0008417 fucosyltransferase activity, 0009246 enterobacterial common antigen biosynthetic process, 0009276 Gram-negative-bacterium-type cell wall
Probab=79.00 E-value=41 Score=32.62 Aligned_cols=136 Identities=15% Similarity=0.094 Sum_probs=86.8
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHh---CCCCEEEEEecCCcc--cccccchhhhhh-cC-CCeEEE-ecccHH---H
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALIN---TKRPFLWVIRSQENK--EGGVLRAGFLEE-TK-DRGLVV-KWCSQE---K 289 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~---~~~~~iw~~~~~~~~--~~~~lp~~~~~~-~~-~n~~v~-~w~pq~---~ 289 (408)
+-+.|-.|.....+.+.++.+ ++|.+ .+.+++.-++.+... -...+- ...++ .+ +|+.+. +++|-. +
T Consensus 184 ~~ltILvGNSgd~sNnHieaL-~~L~~~~~~~~kIivPLsYg~~n~~Yi~~V~-~~~~~lF~~~~~~iL~e~mpf~eYl~ 261 (360)
T PF07429_consen 184 GKLTILVGNSGDPSNNHIEAL-EALKQQFGDDVKIIVPLSYGANNQAYIQQVI-QAGKELFGAENFQILTEFMPFDEYLA 261 (360)
T ss_pred CceEEEEcCCCCCCccHHHHH-HHHHHhcCCCeEEEEECCCCCchHHHHHHHH-HHHHHhcCccceeEhhhhCCHHHHHH
Confidence 357777788886555444332 33332 456777766664311 000110 11111 23 577654 788755 7
Q ss_pred HhcccCcceEEec--cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 290 VLMHAAVSCFLTH--CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 290 lL~h~~v~~fitH--gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
+|+.++++-|.+. =|.|++.-.++.|+|++.- .+-+.+- -+.+ .|+=+.... +.++...|+++=+++..
T Consensus 262 lL~~cDl~if~~~RQQgiGnI~lLl~~G~~v~L~---~~np~~~-~l~~-~~ipVlf~~---d~L~~~~v~ea~rql~~ 332 (360)
T PF07429_consen 262 LLSRCDLGIFNHNRQQGIGNICLLLQLGKKVFLS---RDNPFWQ-DLKE-QGIPVLFYG---DELDEALVREAQRQLAN 332 (360)
T ss_pred HHHhCCEEEEeechhhhHhHHHHHHHcCCeEEEe---cCChHHH-HHHh-CCCeEEecc---ccCCHHHHHHHHHHHhh
Confidence 8999999887764 5899999999999999875 3444444 4444 577776654 78999999999988864
No 147
>TIGR02398 gluc_glyc_Psyn glucosylglycerol-phosphate synthase. Glucosylglycerol-phosphate synthase catalyzes the key step in the biosynthesis of the osmolyte glucosylglycerol. It is known in several cyanobacteria and in Pseudomonas anguilliseptica. The enzyme is closely related to the alpha,alpha-trehalose-phosphate synthase, likewise involved in osmolyte biosynthesis, of E. coli and many other bacteria. A close homolog from Xanthomonas campestris is excluded from this model and scores between trusted and noise.
Probab=78.06 E-value=49 Score=33.89 Aligned_cols=107 Identities=15% Similarity=0.061 Sum_probs=70.1
Q ss_pred eEEEecccHHH---HhcccCcceEEe---ccCcchH-HHHHHcCC----ceeeccCCCChhhhHHhhhceeeeEEEeecC
Q 045998 279 GLVVKWCSQEK---VLMHAAVSCFLT---HCGWNST-LETVAAGV----PVIAYPEWTDQPTDAKLLVDVFKIGVRMRNE 347 (408)
Q Consensus 279 ~~v~~w~pq~~---lL~h~~v~~fit---HgG~~s~-~eal~~Gv----P~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 347 (408)
.++.+.+|+.+ +++-+++ ++. .-|+|-+ .|.+++.. |+|.=-+.+= . +. +.-++.++
T Consensus 364 ~~~~~~v~~~el~alYr~ADV--~lvT~lrDGmNLVa~Eyva~~~~~~GvLILSefaGa-----a--~~-l~~AllVN-- 431 (487)
T TIGR02398 364 QFFTRSLPYEEVSAWFAMADV--MWITPLRDGLNLVAKEYVAAQGLLDGVLVLSEFAGA-----A--VE-LKGALLTN-- 431 (487)
T ss_pred EEEcCCCCHHHHHHHHHhCCE--EEECccccccCcchhhHHhhhcCCCCCEEEeccccc-----h--hh-cCCCEEEC--
Confidence 34557788775 5667777 443 3488865 59999877 5444333221 1 32 44567774
Q ss_pred CCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 348 EDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 348 ~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
..+.+++.++|.+.|+... ++-+++.+++.+.+++ -.+....+.|+++|.
T Consensus 432 ---P~d~~~~A~ai~~AL~m~~-~Er~~R~~~l~~~v~~-----~d~~~W~~~fl~~l~ 481 (487)
T TIGR02398 432 ---PYDPVRMDETIYVALAMPK-AEQQARMREMFDAVNY-----YDVQRWADEFLAAVS 481 (487)
T ss_pred ---CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHhh-----CCHHHHHHHHHHHhh
Confidence 4689999999999998632 3345566666665544 467788889998875
No 148
>COG0438 RfaG Glycosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=76.95 E-value=60 Score=29.74 Aligned_cols=79 Identities=22% Similarity=0.311 Sum_probs=52.3
Q ss_pred CCeEEEeccc---HHHHhcccCcceEEec---cCcch-HHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCC
Q 045998 277 DRGLVVKWCS---QEKVLMHAAVSCFLTH---CGWNS-TLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEED 349 (408)
Q Consensus 277 ~n~~v~~w~p---q~~lL~h~~v~~fitH---gG~~s-~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 349 (408)
.++...++++ ...++..+++ ++.. .|.+. +.||+++|+|+|+-... .....+.+ .+.|. +..
T Consensus 257 ~~v~~~g~~~~~~~~~~~~~~~~--~v~ps~~e~~~~~~~Ea~a~g~pvi~~~~~----~~~e~~~~-~~~g~-~~~--- 325 (381)
T COG0438 257 DNVKFLGYVPDEELAELLASADV--FVLPSLSEGFGLVLLEAMAAGTPVIASDVG----GIPEVVED-GETGL-LVP--- 325 (381)
T ss_pred CcEEEecccCHHHHHHHHHhCCE--EEeccccccchHHHHHHHhcCCcEEECCCC----ChHHHhcC-CCceE-ecC---
Confidence 6777789988 3356777777 5554 35544 59999999999776543 22233333 22466 332
Q ss_pred CCcCHHHHHHHHHHHhcC
Q 045998 350 GTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 350 ~~~~~~~l~~~i~~vl~~ 367 (408)
....+++..++..++.+
T Consensus 326 -~~~~~~~~~~i~~~~~~ 342 (381)
T COG0438 326 -PGDVEELADALEQLLED 342 (381)
T ss_pred -CCCHHHHHHHHHHHhcC
Confidence 22689999999999887
No 149
>PF05159 Capsule_synth: Capsule polysaccharide biosynthesis protein; InterPro: IPR007833 This family includes export proteins involved in capsule polysaccharide biosynthesis, such as KpsS P42218 from SWISSPROT and LipB P57038 from SWISSPROT. Capsule polysaccharide modification protein lipB/A is involved in the phospholipid modification of the capsular polysaccharide and is a strong requirement for its translocation to the cell surface. The capsule of Neisseria meningitidis serogroup B and of other meningococcal serogroups and other Gram-negative bacterial pathogens, are anchored in the outer membrane through a 1,2-diacylglycerol moiety. The lipA and lipB genes are located on the 3' end of the ctr operon. lipA and lipB do not encode proteins responsible for diacylglycerophosphatidic acid substitution of the meningococcal capsule polymer, but they are required for proper translocation and surface expression of the lipidated polymer []. KpsS is an unusual sulphate-modified form of the capsular polysaccharide in Rhizobium loti (Mesorhizobium loti). Many plants, including R. loti, enter into symbiotic relationships with bacteria that allow survival in nutrient-limiting environments. KpsS functions as a fucosyl sulphotransferase in vitro. The kpsS gene product shares no significant amino acid similarity with previously identified sulphotransferases []. Sulphated cell surface polysaccharides are required for optimum nodule formation but limit growth rate and nodule colonisation in M. loti [].; GO: 0000271 polysaccharide biosynthetic process, 0015774 polysaccharide transport
Probab=76.83 E-value=10 Score=35.32 Aligned_cols=81 Identities=15% Similarity=0.161 Sum_probs=49.8
Q ss_pred HHHHHHHHHHH-hC-CCCEEEEEecCCcccccccchhhhhh---cCCCeEEEecccHHHHhcccCcceEEeccCcchHHH
Q 045998 236 NQIDSIAAALI-NT-KRPFLWVIRSQENKEGGVLRAGFLEE---TKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLE 310 (408)
Q Consensus 236 ~~~~~~~~al~-~~-~~~~iw~~~~~~~~~~~~lp~~~~~~---~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~e 310 (408)
..+..++..+. .. +.+++++..+.... .-..++.+. ....+.+.+-++-.++|.+++. +||-.+. .-+|
T Consensus 140 ~~~~~~l~~~~~~~p~~~lvvK~HP~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~Ll~~s~~--VvtinSt-vGlE 213 (269)
T PF05159_consen 140 ADFLDMLESFAKENPDAKLVVKPHPDERG---GNKYSYLEELPNLPNVVIIDDDVNLYELLEQSDA--VVTINST-VGLE 213 (269)
T ss_pred hHHHHHHHHHHHHCCCCEEEEEECchhhC---CCChhHhhhhhcCCCeEEECCCCCHHHHHHhCCE--EEEECCH-HHHH
Confidence 33444444444 33 67777776653221 111122222 2233445577888899999998 8887654 6689
Q ss_pred HHHcCCceeecc
Q 045998 311 TVAAGVPVIAYP 322 (408)
Q Consensus 311 al~~GvP~i~~P 322 (408)
|+.+|+|++++.
T Consensus 214 All~gkpVi~~G 225 (269)
T PF05159_consen 214 ALLHGKPVIVFG 225 (269)
T ss_pred HHHcCCceEEec
Confidence 999999999974
No 150
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=75.33 E-value=60 Score=28.90 Aligned_cols=147 Identities=7% Similarity=0.031 Sum_probs=79.8
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcC-CCeEEEecccHHHHhcccCcc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETK-DRGLVVKWCSQEKVLMHAAVS 297 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~-~n~~v~~w~pq~~lL~h~~v~ 297 (408)
.+.++.|.-|.+. ...+..|.+.|..+.++- .. +.+.+.+... +++.......+..-+..+++
T Consensus 10 ~k~vLVIGgG~va-------~~ka~~Ll~~ga~V~VIs-~~-------~~~~l~~l~~~~~i~~~~~~~~~~~l~~adl- 73 (202)
T PRK06718 10 NKRVVIVGGGKVA-------GRRAITLLKYGAHIVVIS-PE-------LTENLVKLVEEGKIRWKQKEFEPSDIVDAFL- 73 (202)
T ss_pred CCEEEEECCCHHH-------HHHHHHHHHCCCeEEEEc-CC-------CCHHHHHHHhCCCEEEEecCCChhhcCCceE-
Confidence 4568888877665 456667777787766553 21 1122221111 34444444445566788887
Q ss_pred eEEeccCcchHHHHHH----cCCceeeccCCCChhhhH-----HhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 298 CFLTHCGWNSTLETVA----AGVPVIAYPEWTDQPTDA-----KLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 298 ~fitHgG~~s~~eal~----~GvP~i~~P~~~DQ~~na-----~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
+|.--+--.+.+.++ .++++-+ .|.+..+ ..+.+ -++-+.+........-+..|++.|++++. +
T Consensus 74 -ViaaT~d~elN~~i~~~a~~~~lvn~----~d~~~~~~f~~Pa~~~~-g~l~iaIsT~G~sP~la~~lr~~ie~~~~-~ 146 (202)
T PRK06718 74 -VIAATNDPRVNEQVKEDLPENALFNV----ITDAESGNVVFPSALHR-GKLTISVSTDGASPKLAKKIRDELEALYD-E 146 (202)
T ss_pred -EEEcCCCHHHHHHHHHHHHhCCcEEE----CCCCccCeEEEeeEEEc-CCeEEEEECCCCChHHHHHHHHHHHHHcc-h
Confidence 888777666655554 4554433 3443333 22333 34445554422233344567777766663 2
Q ss_pred cHHHHHHHHHHHHHHHHHHH
Q 045998 369 NATQMKKRAVAWKEAAKKAL 388 (408)
Q Consensus 369 ~~~~~~~~a~~l~~~~~~a~ 388 (408)
+-..+-+.+.++++.+++..
T Consensus 147 ~~~~~~~~~~~~R~~~k~~~ 166 (202)
T PRK06718 147 SYESYIDFLYECRQKIKELQ 166 (202)
T ss_pred hHHHHHHHHHHHHHHHHHhC
Confidence 22456777777777776643
No 151
>PRK10422 lipopolysaccharide core biosynthesis protein; Provisional
Probab=73.64 E-value=21 Score=34.69 Aligned_cols=98 Identities=9% Similarity=0.081 Sum_probs=62.0
Q ss_pred CCceEEEecCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcC-CC-eEEEec--ccHH-HH
Q 045998 219 PSSVIYISFGSLL---VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETK-DR-GLVVKW--CSQE-KV 290 (408)
Q Consensus 219 ~~~vvyvs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~-~n-~~v~~w--~pq~-~l 290 (408)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++.-+..+.+. ..-+.+.+... .+ +-+.+- +.+. ++
T Consensus 182 ~~~~i~i~pga~~~~K~Wp~e~fa~l~~~L~~~~~~vvl~ggp~e~e~--~~~~~i~~~~~~~~~~~l~g~~sL~el~al 259 (352)
T PRK10422 182 TQNYVVIQPTARQIFKCWDNDKFSAVIDALQARGYEVVLTSGPDKDDL--ACVNEIAQGCQTPPVTALAGKTTFPELGAL 259 (352)
T ss_pred CCCeEEEecCCCccccCCCHHHHHHHHHHHHHCCCeEEEEcCCChHHH--HHHHHHHHhcCCCccccccCCCCHHHHHHH
Confidence 3467888888865 35778899999999888888777655432210 11122222111 12 223332 3333 78
Q ss_pred hcccCcceEEeccCcchHHHHHHcCCceeec
Q 045998 291 LMHAAVSCFLTHCGWNSTLETVAAGVPVIAY 321 (408)
Q Consensus 291 L~h~~v~~fitHgG~~s~~eal~~GvP~i~~ 321 (408)
++++++ ||+.- .|-++=|.+.|+|.|++
T Consensus 260 i~~a~l--~v~nD-SGp~HlAaA~g~P~v~l 287 (352)
T PRK10422 260 IDHAQL--FIGVD-SAPAHIAAAVNTPLICL 287 (352)
T ss_pred HHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 999999 99874 56677788999999986
No 152
>PF01075 Glyco_transf_9: Glycosyltransferase family 9 (heptosyltransferase); InterPro: IPR002201 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases. These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 9 GT9 from CAZY comprises enzymes with two known activity; lipopolysaccharide N-acetylglucosaminyltransferase (2.4.1.56 from EC), heptosyltransferase (2.4 from EC). Heptosyltransferase I is thought to add L-glycero-D-manno-heptose to the inner 3-deoxy-D-manno-octulosonic acid (Kdo) residue of the lipopolysaccharide core []. Heptosyltransferase II is a glycosyltransferase involved in the synthesis of the inner core region of lipopolysaccharide []. Lipopolysaccharide is a major component of the outer leaflet of the outer membrane in Gram-negative bacteria. It is composed of three domains; lipid A, Core oligosaccharide and the O-antigen. These enzymes transfer heptose to the lipopolysaccharide core [].; GO: 0016757 transferase activity, transferring glycosyl groups, 0008152 metabolic process; PDB: 1PSW_A 2H1F_A 2GT1_A 3TOV_A 2H1H_A.
Probab=73.50 E-value=8.1 Score=35.23 Aligned_cols=98 Identities=10% Similarity=0.056 Sum_probs=54.5
Q ss_pred CCceEEEecCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCC-CeEEEec--ccH-HHHh
Q 045998 219 PSSVIYISFGSLL---VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKD-RGLVVKW--CSQ-EKVL 291 (408)
Q Consensus 219 ~~~vvyvs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~-n~~v~~w--~pq-~~lL 291 (408)
+++.|.|..|+.. ..+.+.+.++++.|.+.+++++...+..+.. ...-+.+.+..+. .+.+.+- +.+ ..++
T Consensus 104 ~~~~i~i~~~a~~~~k~wp~e~~~~l~~~l~~~~~~vvl~g~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~l~e~~ali 181 (247)
T PF01075_consen 104 DKPYIGINPGASWPSKRWPAEKWAELIERLKERGYRVVLLGGPEEQE--KEIADQIAAGLQNPVINLAGKTSLRELAALI 181 (247)
T ss_dssp TSSEEEEE---SSGGGS--HHHHHHHHHHHCCCT-EEEE--SSHHHH--HHHHHHHHTTHTTTTEEETTTS-HHHHHHHH
T ss_pred cCCeEEEeecCCCccccCCHHHHHHHHHHHHhhCceEEEEccchHHH--HHHHHHHHHhcccceEeecCCCCHHHHHHHH
Confidence 4567888888766 4578899999999998887766554433211 0111111122222 2333332 333 3788
Q ss_pred cccCcceEEeccCcchHHHHHHcCCceeec
Q 045998 292 MHAAVSCFLTHCGWNSTLETVAAGVPVIAY 321 (408)
Q Consensus 292 ~h~~v~~fitHgG~~s~~eal~~GvP~i~~ 321 (408)
.++++ +|+.- .|.++=|.+.|+|+|++
T Consensus 182 ~~a~~--~I~~D-tg~~HlA~a~~~p~v~l 208 (247)
T PF01075_consen 182 SRADL--VIGND-TGPMHLAAALGTPTVAL 208 (247)
T ss_dssp HTSSE--EEEES-SHHHHHHHHTT--EEEE
T ss_pred hcCCE--EEecC-ChHHHHHHHHhCCEEEE
Confidence 99998 88874 56778888999999998
No 153
>KOG2941 consensus Beta-1,4-mannosyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=73.50 E-value=81 Score=30.67 Aligned_cols=144 Identities=16% Similarity=0.208 Sum_probs=87.2
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHh---------CCC-CEEEEEecCCcccccccchhhhhhcC----CCeEEE-e
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALIN---------TKR-PFLWVIRSQENKEGGVLRAGFLEETK----DRGLVV-K 283 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~---------~~~-~~iw~~~~~~~~~~~~lp~~~~~~~~----~n~~v~-~ 283 (408)
.++.++|| |....++|.+..+++||.. .+. ..+.++.+.+ ++-+.+.+.+. .++.+. .
T Consensus 253 ~~pallvs--STswTpDEdf~ILL~AL~~y~~~~~~~~~~lP~llciITGKG-----PlkE~Y~~~I~~~~~~~v~~~tp 325 (444)
T KOG2941|consen 253 ERPALLVS--STSWTPDEDFGILLEALVIYEEQLYDKTHNLPSLLCIITGKG-----PLKEKYSQEIHEKNLQHVQVCTP 325 (444)
T ss_pred CCCeEEEe--cCCCCCcccHHHHHHHHHhhhhhhhhccCCCCcEEEEEcCCC-----chhHHHHHHHHHhcccceeeeec
Confidence 45678887 4455577888888888872 122 2344433322 33344433321 455555 7
Q ss_pred ccc---HHHHhcccCcceEEeccCcc-----hHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHH
Q 045998 284 WCS---QEKVLMHAAVSCFLTHCGWN-----STLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQ 355 (408)
Q Consensus 284 w~p---q~~lL~h~~v~~fitHgG~~-----s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~ 355 (408)
|+. ...+|+.+++|..+|-...| -|..-.-+|+|.+++-+- .--..|.+ -.-|.... +++
T Consensus 326 WL~aEDYP~ll~saDlGVcLHtSSSGLDLPMKVVDMFGcglPvcA~~fk----cl~ELVkh-~eNGlvF~-------Ds~ 393 (444)
T KOG2941|consen 326 WLEAEDYPKLLASADLGVCLHTSSSGLDLPMKVVDMFGCGLPVCAVNFK----CLDELVKH-GENGLVFE-------DSE 393 (444)
T ss_pred ccccccchhHhhccccceEeeecCcccCcchhHHHhhcCCCceeeecch----hHHHHHhc-CCCceEec-------cHH
Confidence 874 44689999999988876554 467777888888877432 11223343 44566654 568
Q ss_pred HHHHHHHHHhcCC-----cHHHHHHHHHHHH
Q 045998 356 QVQRCIDEATQGL-----NATQMKKRAVAWK 381 (408)
Q Consensus 356 ~l~~~i~~vl~~~-----~~~~~~~~a~~l~ 381 (408)
+|.+.+.-++.|- +-.++|+|+++-+
T Consensus 394 eLa~ql~~lf~~fp~~a~~l~~lkkn~~e~~ 424 (444)
T KOG2941|consen 394 ELAEQLQMLFKNFPDNADELNQLKKNLREEQ 424 (444)
T ss_pred HHHHHHHHHHhcCCCCHHHHHHHHHhhHHHH
Confidence 8999888777642 1235666666553
No 154
>cd07038 TPP_PYR_PDC_IPDC_like Pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC), indolepyruvate decarboxylase (IPDC) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate decarboxylase (PDC) and indolepyruvate decarboxylase (IPDC) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites, for many
Probab=73.36 E-value=17 Score=31.04 Aligned_cols=29 Identities=24% Similarity=0.347 Sum_probs=22.7
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeeccC
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYPE 323 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P~ 323 (408)
..+++++|.| .+++.+|...++|+|++.-
T Consensus 59 ~~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 93 (162)
T cd07038 59 GLGALVTTYGVGELSALNGIAGAYAEHVPVVHIVG 93 (162)
T ss_pred CCEEEEEcCCccHHHHHHHHHHHHHcCCCEEEEec
Confidence 4555888877 4477899999999999964
No 155
>COG4370 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=72.58 E-value=14 Score=35.02 Aligned_cols=91 Identities=20% Similarity=0.145 Sum_probs=58.8
Q ss_pred CCeEEE-ecccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhh--hHHhhhceeeeEEEeecCCCCCcC
Q 045998 277 DRGLVV-KWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPT--DAKLLVDVFKIGVRMRNEEDGTLS 353 (408)
Q Consensus 277 ~n~~v~-~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~--na~~v~~~~g~G~~l~~~~~~~~~ 353 (408)
+|..+. .|-...++|.|+++ .|--.|. .+-.++-.|+|.|.+|-.+-|+. -|.+=.+-+|+.+.+-. -.
T Consensus 294 dnc~l~lsqqsfadiLH~ada--algmAGT-AtEQavGLGkPvi~fPg~GPQy~pgFA~rQ~rLLG~sltlv~-----~~ 365 (412)
T COG4370 294 DNCSLWLSQQSFADILHAADA--ALGMAGT-ATEQAVGLGKPVIGFPGQGPQYNPGFAERQQRLLGASLTLVR-----PE 365 (412)
T ss_pred CceEEEEeHHHHHHHHHHHHH--HHHhccc-hHHHhhccCCceeecCCCCCCcChHHHHHHHHHhcceeeecC-----Cc
Confidence 565554 77777788888887 5544432 23446788999999999999986 45555555777777753 12
Q ss_pred HHHHHHHHHHHhcCCcHHHHHHHHH
Q 045998 354 IQQVQRCIDEATQGLNATQMKKRAV 378 (408)
Q Consensus 354 ~~~l~~~i~~vl~~~~~~~~~~~a~ 378 (408)
...-..++++++.| +.+...++
T Consensus 366 aq~a~~~~q~ll~d---p~r~~air 387 (412)
T COG4370 366 AQAAAQAVQELLGD---PQRLTAIR 387 (412)
T ss_pred hhhHHHHHHHHhcC---hHHHHHHH
Confidence 23334444558888 55555544
No 156
>PRK14501 putative bifunctional trehalose-6-phosphate synthase/HAD hydrolase subfamily IIB; Provisional
Probab=72.54 E-value=71 Score=34.57 Aligned_cols=109 Identities=17% Similarity=0.120 Sum_probs=63.9
Q ss_pred EEecccHH---HHhcccCcceEEec---cCcc-hHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcC
Q 045998 281 VVKWCSQE---KVLMHAAVSCFLTH---CGWN-STLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLS 353 (408)
Q Consensus 281 v~~w~pq~---~lL~h~~v~~fitH---gG~~-s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~ 353 (408)
+.+++++. ++++.+++ |+.- -|+| .+.|++++|+|-.++|+..+----+.. ..-|+.++ ..+
T Consensus 346 ~~~~~~~~~l~~ly~~aDv--~v~~S~~EG~~lv~~Eama~~~~~~g~~vls~~~G~~~~----l~~~llv~-----P~d 414 (726)
T PRK14501 346 FYRSLPFEELVALYRAADV--ALVTPLRDGMNLVAKEYVASRTDGDGVLILSEMAGAAAE----LAEALLVN-----PND 414 (726)
T ss_pred EeCCCCHHHHHHHHHhccE--EEecccccccCcccceEEEEcCCCCceEEEecccchhHH----hCcCeEEC-----CCC
Confidence 44677877 46778888 6653 3554 678999997753223322221111111 22366664 457
Q ss_pred HHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 354 IQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 354 ~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
.+++.++|.+++.... +..+++.+++++.+++ -+.....++|++.+.
T Consensus 415 ~~~la~ai~~~l~~~~-~e~~~r~~~~~~~v~~-----~~~~~w~~~~l~~l~ 461 (726)
T PRK14501 415 IEGIAAAIKRALEMPE-EEQRERMQAMQERLRR-----YDVHKWASDFLDELR 461 (726)
T ss_pred HHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHH
Confidence 8999999999997521 2344444444444322 556677777777664
No 157
>cd07035 TPP_PYR_POX_like Pyrimidine (PYR) binding domain of POX and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) and related protiens subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. A polar interaction between the conserved glutamate of the PYR domain and the N1' of the TPP aminopyrimidine ring is shared by most TPP-dependent enzymes, and participates in the activation of TPP. For glyoxylate carboligase, which belongs to this subfamily, but lacks this conserved glutamate, the rate of the initial TPP activation step is reduced but the ensuing steps of the enzymic reaction proceed efficiently. The PYR and PP domains have a common fold, but do not share strong sequence conservatio
Probab=72.10 E-value=19 Score=30.19 Aligned_cols=29 Identities=10% Similarity=0.206 Sum_probs=22.8
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeeccC
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYPE 323 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P~ 323 (408)
+.+++++|+| .+.+.+|...++|+|++.-
T Consensus 59 ~~~v~~~~~gpG~~n~~~~l~~A~~~~~Pll~i~~ 93 (155)
T cd07035 59 KPGVVLVTSGPGLTNAVTGLANAYLDSIPLLVITG 93 (155)
T ss_pred CCEEEEEcCCCcHHHHHHHHHHHHhhCCCEEEEeC
Confidence 3445889876 4578899999999999864
No 158
>PLN02470 acetolactate synthase
Probab=72.00 E-value=19 Score=37.79 Aligned_cols=92 Identities=14% Similarity=0.146 Sum_probs=56.5
Q ss_pred ecCCcccCCH--HHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEec-ccHHHH-------hcccC
Q 045998 226 SFGSLLVLSQ--NQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKW-CSQEKV-------LMHAA 295 (408)
Q Consensus 226 s~GS~~~~~~--~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w-~pq~~l-------L~h~~ 295 (408)
+|||....+. .-.+.+++.|++.|.+.++-+...... .+-+.+.+ .+++..+.- -.+.+. ..+.+
T Consensus 2 ~~~~~~~~~~~~~~a~~l~~~L~~~GV~~vFg~pG~~~~---~l~dal~~--~~~i~~i~~rhE~~A~~~Adgyar~tg~ 76 (585)
T PLN02470 2 TFQSRFAPDEPRKGADILVEALEREGVDTVFAYPGGASM---EIHQALTR--SNCIRNVLCRHEQGEVFAAEGYAKASGK 76 (585)
T ss_pred CcccCCCCCccccHHHHHHHHHHHcCCCEEEEcCCcccH---HHHHHHhc--cCCceEEEeccHHHHHHHHHHHHHHhCC
Confidence 4777774333 346789999999999998876554322 22222211 123433321 112111 23446
Q ss_pred cceEEeccCc------chHHHHHHcCCceeecc
Q 045998 296 VSCFLTHCGW------NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 296 v~~fitHgG~------~s~~eal~~GvP~i~~P 322 (408)
++++++|.|- +++.+|...++|||++.
T Consensus 77 ~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~I~ 109 (585)
T PLN02470 77 VGVCIATSGPGATNLVTGLADALLDSVPLVAIT 109 (585)
T ss_pred CEEEEECCCccHHHHHHHHHHHHhcCCcEEEEe
Confidence 7779999994 47899999999999995
No 159
>cd03793 GT1_Glycogen_synthase_GSY2_like Glycogen synthase, which is most closely related to the GT1 family of glycosyltransferases, catalyzes the transfer of a glucose molecule from UDP-glucose to a terminal branch of a glycogen molecule, a rate-limit step of glycogen biosynthesis. GSY2, the member of this family in S. cerevisiae, has been shown to possess glycogen synthase activity.
Probab=71.01 E-value=19 Score=37.48 Aligned_cols=81 Identities=17% Similarity=0.193 Sum_probs=48.6
Q ss_pred cHHHHhcccCcceEEe-ccCcc-hHHHHHHcCCceeeccCCC-ChhhhHHhhhceeeeEEEeecCC--CCCcCHHHHHHH
Q 045998 286 SQEKVLMHAAVSCFLT-HCGWN-STLETVAAGVPVIAYPEWT-DQPTDAKLLVDVFKIGVRMRNEE--DGTLSIQQVQRC 360 (408)
Q Consensus 286 pq~~lL~h~~v~~fit-HgG~~-s~~eal~~GvP~i~~P~~~-DQ~~na~~v~~~~g~G~~l~~~~--~~~~~~~~l~~~ 360 (408)
+..++++.+++.+|-+ +=||| +++||+++|+|+|+-...+ ..+.. ..+......|+.+.... +-.-+.++|.++
T Consensus 467 ~y~E~~~g~dl~v~PS~yE~fG~~~lEAma~G~PvI~t~~~gf~~~v~-E~v~~~~~~gi~V~~r~~~~~~e~v~~La~~ 545 (590)
T cd03793 467 DYEEFVRGCHLGVFPSYYEPWGYTPAECTVMGIPSITTNLSGFGCFME-EHIEDPESYGIYIVDRRFKSPDESVQQLTQY 545 (590)
T ss_pred chHHHhhhceEEEeccccCCCCcHHHHHHHcCCCEEEccCcchhhhhH-HHhccCCCceEEEecCCccchHHHHHHHHHH
Confidence 4567888899944433 34544 8899999999999987643 22222 12221012566665211 112355788888
Q ss_pred HHHHhcC
Q 045998 361 IDEATQG 367 (408)
Q Consensus 361 i~~vl~~ 367 (408)
+.+++..
T Consensus 546 m~~~~~~ 552 (590)
T cd03793 546 MYEFCQL 552 (590)
T ss_pred HHHHhCC
Confidence 8888854
No 160
>cd07039 TPP_PYR_POX Pyrimidine (PYR) binding domain of POX. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of pyruvate oxidase (POX) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dimer-of-active sites. Lactobacillus plantarum POX is a homotetramer (dimer-of-homodimers), having two active sites per homodimer lying between PYR and PP domains of differ
Probab=69.81 E-value=41 Score=28.82 Aligned_cols=29 Identities=21% Similarity=0.267 Sum_probs=23.5
Q ss_pred CcceEEeccCc------chHHHHHHcCCceeeccC
Q 045998 295 AVSCFLTHCGW------NSTLETVAAGVPVIAYPE 323 (408)
Q Consensus 295 ~v~~fitHgG~------~s~~eal~~GvP~i~~P~ 323 (408)
+.+++++|+|- +++.+|...++|||++.-
T Consensus 63 ~~~v~~~t~GpG~~n~~~~l~~A~~~~~Pvl~I~g 97 (164)
T cd07039 63 KLGVCLGSSGPGAIHLLNGLYDAKRDRAPVLAIAG 97 (164)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEec
Confidence 45558899884 478999999999999963
No 161
>TIGR02195 heptsyl_trn_II lipopolysaccharide heptosyltransferase II. This family consists of examples of ADP-heptose:LPS heptosyltransferase II, an enzyme of LPS inner core region biosynthesis. LPS, composed of lipid A, a core region, and O antigen, is found in the outer membrane of Gram-negative bacteria.
Probab=68.69 E-value=35 Score=32.72 Aligned_cols=96 Identities=11% Similarity=0.071 Sum_probs=60.8
Q ss_pred CCceEEEecCCcc----cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeE-EEe--cccHH-HH
Q 045998 219 PSSVIYISFGSLL----VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGL-VVK--WCSQE-KV 290 (408)
Q Consensus 219 ~~~vvyvs~GS~~----~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~-v~~--w~pq~-~l 290 (408)
.++.|.+.-|+.. ..+.+.+.++++.|.+.+.+++.. +..+.. ..-+.+.+..+.++. +.+ -+.+. .+
T Consensus 173 ~~~~i~i~pga~~~~~K~Wp~e~~~~li~~l~~~~~~ivl~-G~~~e~---~~~~~i~~~~~~~~~~l~g~~sL~el~al 248 (334)
T TIGR02195 173 ERPIIAFCPGAEFGPAKRWPHEHYAELAKRLIDQGYQVVLF-GSAKDH---PAGNEIEALLPGELRNLAGETSLDEAVDL 248 (334)
T ss_pred CCCEEEEcCCCCCCccCCCCHHHHHHHHHHHHHCCCEEEEE-EChhhH---HHHHHHHHhCCcccccCCCCCCHHHHHHH
Confidence 4568888888742 357788999999998777776654 433211 111223323333322 222 23333 78
Q ss_pred hcccCcceEEeccCcchHHHHHHcCCceeec
Q 045998 291 LMHAAVSCFLTHCGWNSTLETVAAGVPVIAY 321 (408)
Q Consensus 291 L~h~~v~~fitHgG~~s~~eal~~GvP~i~~ 321 (408)
++++++ ||+.- .|-++=|.+.|+|+|++
T Consensus 249 i~~a~l--~I~~D-SGp~HlAaA~~~P~i~l 276 (334)
T TIGR02195 249 IALAKA--VVTND-SGLMHVAAALNRPLVAL 276 (334)
T ss_pred HHhCCE--EEeeC-CHHHHHHHHcCCCEEEE
Confidence 999998 99874 56677788999999985
No 162
>cd07037 TPP_PYR_MenD Pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate synthase (MenD) and related proteins. Thiamine pyrophosphate (TPP family), pyrimidine (PYR) binding domain of 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexadiene-1-carboxylate (SEPHCHC) synthase (MenD) subfamily. The PYR domain is found in many key metabolic enzymes which use TPP (also known as thiamine diphosphate) as a cofactor. TPP binds in the cleft formed by a PYR domain and a PP domain. The PYR domain, binds the aminopyrimidine ring of TPP, the PP domain binds the diphosphate residue. The PYR and PP domains have a common fold, but do not share strong sequence conservation. The PP domain is not included in this sub-family. Most TPP-dependent enzymes have the PYR and PP domains on the same subunit although these domains can be alternatively arranged in the primary structure. TPP-dependent enzymes are multisubunit proteins, the smallest catalytic unit being a dim
Probab=68.18 E-value=37 Score=29.10 Aligned_cols=29 Identities=17% Similarity=0.321 Sum_probs=23.0
Q ss_pred CcceEEeccCc------chHHHHHHcCCceeeccC
Q 045998 295 AVSCFLTHCGW------NSTLETVAAGVPVIAYPE 323 (408)
Q Consensus 295 ~v~~fitHgG~------~s~~eal~~GvP~i~~P~ 323 (408)
+.+++++|+|- +++.||...++|||++.-
T Consensus 60 ~~gv~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~g 94 (162)
T cd07037 60 RPVAVVCTSGTAVANLLPAVVEAYYSGVPLLVLTA 94 (162)
T ss_pred CCEEEEECCchHHHHHhHHHHHHHhcCCCEEEEEC
Confidence 34558888884 477899999999999953
No 163
>PRK10964 ADP-heptose:LPS heptosyl transferase I; Provisional
Probab=66.51 E-value=26 Score=33.51 Aligned_cols=138 Identities=12% Similarity=-0.015 Sum_probs=75.0
Q ss_pred CceEEEecCC-cc--cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEe--cccHH-HHhcc
Q 045998 220 SSVIYISFGS-LL--VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVK--WCSQE-KVLMH 293 (408)
Q Consensus 220 ~~vvyvs~GS-~~--~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~--w~pq~-~lL~h 293 (408)
++.|.+..|+ .. ..+.+.+.++++.+.+.+.++++..|..+.. ..-+.+.+.. .++.+.+ .+.+. .++++
T Consensus 178 ~~~i~~~~~~s~~~k~Wp~e~~a~li~~l~~~~~~ivl~~G~~~e~---~~~~~i~~~~-~~~~l~g~~sL~elaali~~ 253 (322)
T PRK10964 178 GPYLVFLHATTRDDKHWPEAHWRELIGLLAPSGLRIKLPWGAEHEE---QRAKRLAEGF-PYVEVLPKLSLEQVARVLAG 253 (322)
T ss_pred CCeEEEEeCCCcccccCCHHHHHHHHHHHHHCCCeEEEeCCCHHHH---HHHHHHHccC-CcceecCCCCHHHHHHHHHh
Confidence 3455444444 33 3578899999999987788876654532111 1112222221 2333433 23444 78999
Q ss_pred cCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 294 AAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 294 ~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
+++ ||+.. .|.++=|.+.|+|+|++=--.+...++-.-.. ..-++....-=..++.+++-++++++|.
T Consensus 254 a~l--~I~nD-SGp~HlA~A~g~p~valfGpt~p~~~~p~~~~--~~~~~~~~~cm~~I~~e~V~~~~~~~l~ 321 (322)
T PRK10964 254 AKA--VVSVD-TGLSHLTAALDRPNITLYGPTDPGLIGGYGKN--QHACRSPGKSMADLSAETVFQKLETLIS 321 (322)
T ss_pred CCE--EEecC-CcHHHHHHHhCCCEEEEECCCCcccccCCCCC--ceeecCCCcccccCCHHHHHHHHHHHhh
Confidence 999 99875 56778888999999996221222111111000 0000100000157788888888887763
No 164
>PRK10916 ADP-heptose:LPS heptosyltransferase II; Provisional
Probab=66.37 E-value=40 Score=32.62 Aligned_cols=96 Identities=11% Similarity=0.096 Sum_probs=60.6
Q ss_pred CCceEEEecCCcc----cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCC----Ce-EEEec--ccH
Q 045998 219 PSSVIYISFGSLL----VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKD----RG-LVVKW--CSQ 287 (408)
Q Consensus 219 ~~~vvyvs~GS~~----~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~----n~-~v~~w--~pq 287 (408)
+++.|.|..|+.. .-+.+.+.++++.|.+.+.++++.-+..+.. .-+.+.+..+. ++ -+.+- +.+
T Consensus 179 ~~~~i~i~pga~~~~~K~Wp~e~~a~l~~~l~~~~~~vvl~Gg~~e~~----~~~~i~~~~~~~~~~~~~~l~g~~sL~e 254 (348)
T PRK10916 179 ERPIIGFCPGAEFGPAKRWPHYHYAELAQQLIDEGYQVVLFGSAKDHE----AGNEILAALNTEQQAWCRNLAGETQLEQ 254 (348)
T ss_pred CCCEEEEeCCCCCccccCCCHHHHHHHHHHHHHCCCeEEEEeCHHhHH----HHHHHHHhcccccccceeeccCCCCHHH
Confidence 4568888888742 3578889999999987777776653332221 11222222211 11 22232 333
Q ss_pred H-HHhcccCcceEEeccCcchHHHHHHcCCceeec
Q 045998 288 E-KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAY 321 (408)
Q Consensus 288 ~-~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~ 321 (408)
. ++++++++ ||+. -.|-++=|.+.|+|+|++
T Consensus 255 l~ali~~a~l--~I~n-DTGp~HlAaA~g~P~val 286 (348)
T PRK10916 255 AVILIAACKA--IVTN-DSGLMHVAAALNRPLVAL 286 (348)
T ss_pred HHHHHHhCCE--EEec-CChHHHHHHHhCCCEEEE
Confidence 3 68999998 8886 456778888999999985
No 165
>KOG0853 consensus Glycosyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=65.97 E-value=51 Score=33.62 Aligned_cols=61 Identities=18% Similarity=0.302 Sum_probs=41.0
Q ss_pred hHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 045998 307 STLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAV 378 (408)
Q Consensus 307 s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~ 378 (408)
+++||+++|.|+++.= +--=+.-|+. .-.|..++. +.-....+.+++.++..| ++++.++.
T Consensus 381 v~IEAMa~glPvvAt~----~GGP~EiV~~-~~tG~l~dp---~~e~~~~~a~~~~kl~~~---p~l~~~~~ 441 (495)
T KOG0853|consen 381 VPIEAMACGLPVVATN----NGGPAEIVVH-GVTGLLIDP---GQEAVAELADALLKLRRD---PELWARMG 441 (495)
T ss_pred eeHHHHhcCCCEEEec----CCCceEEEEc-CCcceeeCC---chHHHHHHHHHHHHHhcC---HHHHHHHH
Confidence 7899999999999973 2223344444 456766653 222333799999999988 67765543
No 166
>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain. This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.
Probab=65.92 E-value=99 Score=27.58 Aligned_cols=149 Identities=15% Similarity=0.137 Sum_probs=79.2
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhh-cCCCeEEEecccHHHHhcccCcc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEE-TKDRGLVVKWCSQEKVLMHAAVS 297 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~-~~~n~~v~~w~pq~~lL~h~~v~ 297 (408)
.+.|++|.-|.+. ..-+..|.+.|.++.++-.... +++.+- ..+++..+.--.+...|..+.+
T Consensus 9 gk~vlVvGgG~va-------~rk~~~Ll~~ga~VtVvsp~~~--------~~l~~l~~~~~i~~~~~~~~~~dl~~~~l- 72 (205)
T TIGR01470 9 GRAVLVVGGGDVA-------LRKARLLLKAGAQLRVIAEELE--------SELTLLAEQGGITWLARCFDADILEGAFL- 72 (205)
T ss_pred CCeEEEECcCHHH-------HHHHHHHHHCCCEEEEEcCCCC--------HHHHHHHHcCCEEEEeCCCCHHHhCCcEE-
Confidence 3468888777655 3455667778887765533211 121111 1235555422223445777777
Q ss_pred eEEeccCcchHHHH-----HHcCCceee--ccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcH
Q 045998 298 CFLTHCGWNSTLET-----VAAGVPVIA--YPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNA 370 (408)
Q Consensus 298 ~fitHgG~~s~~ea-----l~~GvP~i~--~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~ 370 (408)
+|..-|...+.+. -..|+|+-+ -|-..| +..-..+.+ -++-+.+........-+..|++.|++++..+ -
T Consensus 73 -Vi~at~d~~ln~~i~~~a~~~~ilvn~~d~~e~~~-f~~pa~~~~-g~l~iaisT~G~sP~la~~lr~~ie~~l~~~-~ 148 (205)
T TIGR01470 73 -VIAATDDEELNRRVAHAARARGVPVNVVDDPELCS-FIFPSIVDR-SPVVVAISSGGAAPVLARLLRERIETLLPPS-L 148 (205)
T ss_pred -EEECCCCHHHHHHHHHHHHHcCCEEEECCCcccCe-EEEeeEEEc-CCEEEEEECCCCCcHHHHHHHHHHHHhcchh-H
Confidence 8888776644443 346888843 333333 222233333 2354555442223444567777777777531 1
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045998 371 TQMKKRAVAWKEAAKKA 387 (408)
Q Consensus 371 ~~~~~~a~~l~~~~~~a 387 (408)
..|-+.+.++++.+++.
T Consensus 149 ~~~~~~~~~~R~~~k~~ 165 (205)
T TIGR01470 149 GDLATLAATWRDAVKKR 165 (205)
T ss_pred HHHHHHHHHHHHHHHhh
Confidence 34666666677766654
No 167
>PF12000 Glyco_trans_4_3: Gkycosyl transferase family 4 group; InterPro: IPR022623 This presumed domain is functionally uncharacterised and found in bacteria. This region is about 170 amino acids in length and is found N-terminal to PF00534 from PFAM. There is a single completely conserved residue G that may be functionally important.
Probab=65.03 E-value=54 Score=28.42 Aligned_cols=43 Identities=12% Similarity=0.033 Sum_probs=35.3
Q ss_pred HHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHc-CCCeEEEe
Q 045998 47 NLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEH-KIPCAVLW 89 (408)
Q Consensus 47 ~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~l-gIP~v~~~ 89 (408)
.+...+.+|++++..||+||...-...++.+-+.+ ++|.+.|.
T Consensus 52 av~~a~~~L~~~Gf~PDvI~~H~GWGe~Lflkdv~P~a~li~Y~ 95 (171)
T PF12000_consen 52 AVARAARQLRAQGFVPDVIIAHPGWGETLFLKDVFPDAPLIGYF 95 (171)
T ss_pred HHHHHHHHHHHcCCCCCEEEEcCCcchhhhHHHhCCCCcEEEEE
Confidence 45566777777778899999998888888889999 89998873
No 168
>COG0859 RfaF ADP-heptose:LPS heptosyltransferase [Cell envelope biogenesis, outer membrane]
Probab=62.81 E-value=33 Score=33.15 Aligned_cols=95 Identities=14% Similarity=0.090 Sum_probs=61.4
Q ss_pred CceEEEecC-Ccc---cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEec--ccHH-HHhc
Q 045998 220 SSVIYISFG-SLL---VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKW--CSQE-KVLM 292 (408)
Q Consensus 220 ~~vvyvs~G-S~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w--~pq~-~lL~ 292 (408)
++.|.++.| |.. ..+.+.+.++++.|.+.+.++++..+. +.. ..-+.+.+..+....+.+- +.|. .++.
T Consensus 175 ~~~i~i~pg~s~~~~K~wp~e~~~~l~~~l~~~~~~Vvl~g~~-~e~---e~~~~i~~~~~~~~~l~~k~sL~e~~~li~ 250 (334)
T COG0859 175 RPYIVINPGASRGSAKRWPLEHYAELAELLIAKGYQVVLFGGP-DEE---ERAEEIAKGLPNAVILAGKTSLEELAALIA 250 (334)
T ss_pred CCeEEEeccccccccCCCCHHHHHHHHHHHHHCCCEEEEecCh-HHH---HHHHHHHHhcCCccccCCCCCHHHHHHHHh
Confidence 578999888 442 568899999999999999665554444 221 1212333333333224433 3333 6778
Q ss_pred ccCcceEEeccCcchHHHHHHcCCceeec
Q 045998 293 HAAVSCFLTHCGWNSTLETVAAGVPVIAY 321 (408)
Q Consensus 293 h~~v~~fitHgG~~s~~eal~~GvP~i~~ 321 (408)
++++ ||+. -.|-++=|.+.|+|.|++
T Consensus 251 ~a~l--~I~~-DSg~~HlAaA~~~P~I~i 276 (334)
T COG0859 251 GADL--VIGN-DSGPMHLAAALGTPTIAL 276 (334)
T ss_pred cCCE--EEcc-CChHHHHHHHcCCCEEEE
Confidence 8887 7765 456677788889999996
No 169
>PLN03064 alpha,alpha-trehalose-phosphate synthase (UDP-forming); Provisional
Probab=59.41 E-value=2e+02 Score=32.08 Aligned_cols=101 Identities=17% Similarity=0.153 Sum_probs=61.1
Q ss_pred ecccHH---HHhcccCcceEEe---ccCcchH-HHHHHcCC-----ceeeccCCCChhhhHHhhhceee-eEEEeecCCC
Q 045998 283 KWCSQE---KVLMHAAVSCFLT---HCGWNST-LETVAAGV-----PVIAYPEWTDQPTDAKLLVDVFK-IGVRMRNEED 349 (408)
Q Consensus 283 ~w~pq~---~lL~h~~v~~fit---HgG~~s~-~eal~~Gv-----P~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~ 349 (408)
..+|+. +++.-+++ |+. .-|+|-+ .|+++++. +++ .-++- -|.. +| -|+.++
T Consensus 446 ~~l~~eeL~AlY~~ADV--~lvTslrDGmNLva~Eyva~~~~~~GvLIL--SEfaG---aa~~----L~~~AllVN---- 510 (934)
T PLN03064 446 RSLDFHALCALYAVTDV--ALVTSLRDGMNLVSYEFVACQDSKKGVLIL--SEFAG---AAQS----LGAGAILVN---- 510 (934)
T ss_pred cCCCHHHHHHHHHhCCE--EEeCccccccCchHHHHHHhhcCCCCCeEE--eCCCc---hHHH----hCCceEEEC----
Confidence 335655 56677887 554 3488865 59999954 333 32221 1221 32 466664
Q ss_pred CCcCHHHHHHHHHHHhc-CCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 350 GTLSIQQVQRCIDEATQ-GLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 350 ~~~~~~~l~~~i~~vl~-~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
..+.+++.++|.+.|+ ++ +.-+++.+++.+.++. -++....+.|+++|.
T Consensus 511 -P~D~~~vA~AI~~AL~M~~--~Er~~r~~~~~~~V~~-----~d~~~Wa~~fl~~L~ 560 (934)
T PLN03064 511 -PWNITEVAASIAQALNMPE--EEREKRHRHNFMHVTT-----HTAQEWAETFVSELN 560 (934)
T ss_pred -CCCHHHHHHHHHHHHhCCH--HHHHHHHHHHHhhccc-----CCHHHHHHHHHHHHH
Confidence 5688999999999887 32 3344444445544432 466777888888775
No 170
>cd07025 Peptidase_S66 LD-Carboxypeptidase, a serine protease, includes microcin C7 self immunity protein. LD-carboxypeptidase (Muramoyltetrapeptide carboxypeptidase; EC 3.4.17.13; Merops family S66; initially described as Carboxypeptidase II) family also includes the microcin c7 self-immunity protein (MccF) as well as uncharacterized proteins including hypothetical proteins. LD-carboxypeptidase hydrolyzes the amide bond that links the dibasic amino acids to C-terminal D-amino acids. The physiological substrates of LD-carboxypeptidase are tetrapeptide fragments (such as UDP-MurNAc-tetrapeptides) that are produced when bacterial cell walls are degraded; they contain an L-configured residue (L-lysine or meso-diaminopimelic acid residue) as the penultimate residue and D-alanine as the ultimate residue. A possible role of LD-carboxypeptidase is in peptidoglycan recycling whereby the resulting tripeptide (precursor for murein synthesis) can be reconverted into peptidoglycan by attachment o
Probab=55.99 E-value=25 Score=33.09 Aligned_cols=74 Identities=11% Similarity=0.202 Sum_probs=50.4
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHH
Q 045998 233 LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETV 312 (408)
Q Consensus 233 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal 312 (408)
.+++..+++.+++.+...+.||.++..... .++.++++...+-+||++ ||=+.-..+++-++
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGG~ga----------------~rlL~~ld~~~~~~~pK~--~iGySDiTaL~~~l 107 (282)
T cd07025 46 TDEERAADLNAAFADPEIKAIWCARGGYGA----------------NRLLPYLDYDLIRANPKI--FVGYSDITALHLAL 107 (282)
T ss_pred CHHHHHHHHHHHhhCCCCCEEEEcCCcCCH----------------HHhhhhCCHHHHhhCCeE--EEEecHHHHHHHHH
Confidence 456778999999999999999998765321 123344444555566666 77777777777766
Q ss_pred Hc--CCceeeccCC
Q 045998 313 AA--GVPVIAYPEW 324 (408)
Q Consensus 313 ~~--GvP~i~~P~~ 324 (408)
+. |++.+--|..
T Consensus 108 ~~~~g~~t~hGp~~ 121 (282)
T cd07025 108 YAKTGLVTFHGPML 121 (282)
T ss_pred HHhcCceEEECccc
Confidence 53 6676666654
No 171
>TIGR00725 conserved hypothetical protein, DprA/Smf-related, family 1. This model represents one branch of a subfamily of uncharacterized proteins. Both PSI-BLAST and weak hits by this model show a low level of similarity and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting the branches may have distinct functions. This family is one of several families within the scope of PFAM model pfam03641, several members of which are annotated as lysine decarboxylases. That larger family, and the branch described by this model, have a well-conserved motif PGGXGTXXE.
Probab=50.65 E-value=1.4e+02 Score=25.45 Aligned_cols=100 Identities=13% Similarity=0.200 Sum_probs=55.9
Q ss_pred hhhhhhhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEec-c
Q 045998 207 CIEIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKW-C 285 (408)
Q Consensus 207 ~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w-~ 285 (408)
-.+|-+||.++ ++..++ |. .........++..+.+-+++=++...... +..+ .....+.++ .
T Consensus 20 A~~lg~~La~~---g~~lv~-Gg----~~GlM~a~a~ga~~~gg~viGVlp~~l~~-----~~~~----~~~~i~~~~~~ 82 (159)
T TIGR00725 20 AYRLGKELAKK---GHILIN-GG----RTGVMEAVSKGAREAGGLVVGILPDEDFA-----GNPY----LTIKVKTGMNF 82 (159)
T ss_pred HHHHHHHHHHC---CCEEEc-CC----chhHHHHHHHHHHHCCCeEEEECChhhcc-----CCCC----ceEEEECCCcc
Confidence 45566888775 246666 43 22445667767666666665544321100 0000 011222344 4
Q ss_pred cHHHHhcccCcceEEeccCcchHH---HHHHcCCceeeccC
Q 045998 286 SQEKVLMHAAVSCFLTHCGWNSTL---ETVAAGVPVIAYPE 323 (408)
Q Consensus 286 pq~~lL~h~~v~~fitHgG~~s~~---eal~~GvP~i~~P~ 323 (408)
+...++...+-..++--||.||+. |++.+++|+++++.
T Consensus 83 ~Rk~~m~~~sda~IvlpGG~GTL~E~~~a~~~~kpv~~l~~ 123 (159)
T TIGR00725 83 ARNFILVRSADVVVSVGGGYGTAIEILGAYALGGPVVVLRG 123 (159)
T ss_pred hHHHHHHHHCCEEEEcCCchhHHHHHHHHHHcCCCEEEEEC
Confidence 556655554445566678888765 46889999999875
No 172
>PRK06276 acetolactate synthase catalytic subunit; Reviewed
Probab=48.44 E-value=49 Score=34.70 Aligned_cols=28 Identities=25% Similarity=0.315 Sum_probs=23.3
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
+.++.++|.| .+++.+|.+.++|+|++-
T Consensus 63 ~~gv~~~t~GPG~~n~l~~i~~A~~~~~Pvl~I~ 96 (586)
T PRK06276 63 KVGVCVATSGPGATNLVTGIATAYADSSPVIALT 96 (586)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 4566999988 458899999999999984
No 173
>COG0801 FolK 7,8-dihydro-6-hydroxymethylpterin-pyrophosphokinase [Coenzyme metabolism]
Probab=47.30 E-value=38 Score=29.00 Aligned_cols=29 Identities=28% Similarity=0.261 Sum_probs=25.1
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCC
Q 045998 222 VIYISFGSLLVLSQNQIDSIAAALINTKR 250 (408)
Q Consensus 222 vvyvs~GS~~~~~~~~~~~~~~al~~~~~ 250 (408)
.+|+|+||........++..+.+|.+.+.
T Consensus 3 ~vyl~LGSNlgd~~~~l~~A~~~L~~~~~ 31 (160)
T COG0801 3 RVYLGLGSNLGDRLKQLRAALAALDALAD 31 (160)
T ss_pred EEEEEecCCCCCHHHHHHHHHHHHHhCCC
Confidence 59999999998777889999999988764
No 174
>cd01840 SGNH_hydrolase_yrhL_like yrhL-like subfamily of SGNH-hydrolases, a diverse family of lipases and esterases. The tertiary fold of the enzyme is substantially different from that of the alpha/beta hydrolase family and unique among all known hydrolases; its active site closely resembles the Ser-His-Asp(Glu) triad found in other serine hydrolases. Most members of this sub-family appear to co-occur with N-terminal acyltransferase domains. Might be involved in lipid metabolism.
Probab=46.67 E-value=57 Score=27.14 Aligned_cols=46 Identities=20% Similarity=0.221 Sum_probs=33.1
Q ss_pred hhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEec
Q 045998 212 QWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRS 258 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~ 258 (408)
+.++......+|++++||.-....+.++++++.+. .+.+++++.-.
T Consensus 43 ~~~~~~~~~d~vvi~lGtNd~~~~~nl~~ii~~~~-~~~~ivlv~~~ 88 (150)
T cd01840 43 QLKDSGKLRKTVVIGLGTNGPFTKDQLDELLDALG-PDRQVYLVNPH 88 (150)
T ss_pred HHHHcCCCCCeEEEEecCCCCCCHHHHHHHHHHcC-CCCEEEEEECC
Confidence 33333234569999999988778888999988884 46777776543
No 175
>PRK02155 ppnK NAD(+)/NADH kinase family protein; Provisional
Probab=46.45 E-value=1e+02 Score=29.29 Aligned_cols=95 Identities=16% Similarity=0.201 Sum_probs=54.5
Q ss_pred HHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHc-
Q 045998 236 NQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAA- 314 (408)
Q Consensus 236 ~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~- 314 (408)
+.+..+.+.|++.++.+++...... .+. . .+ ..-.+..++-..+++ +|+-||=||+++++..
T Consensus 21 e~~~~i~~~L~~~g~~v~v~~~~~~-----~~~-----~--~~---~~~~~~~~~~~~~d~--vi~~GGDGt~l~~~~~~ 83 (291)
T PRK02155 21 EPLESLAAFLAKRGFEVVFEADTAR-----NIG-----L--TG---YPALTPEEIGARADL--AVVLGGDGTMLGIGRQL 83 (291)
T ss_pred HHHHHHHHHHHHCCCEEEEecchhh-----hcC-----c--cc---ccccChhHhccCCCE--EEEECCcHHHHHHHHHh
Confidence 4466677778778877666322110 000 0 00 000122333345677 9999999999999764
Q ss_pred ---CCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 315 ---GVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 315 ---GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++|++++-+. .+|.. ..++.+++.+++++++.+
T Consensus 84 ~~~~~pilGIn~G--------------~lGFL------~~~~~~~~~~~l~~~~~g 119 (291)
T PRK02155 84 APYGVPLIGINHG--------------RLGFI------TDIPLDDMQETLPPMLAG 119 (291)
T ss_pred cCCCCCEEEEcCC--------------Ccccc------ccCCHHHHHHHHHHHHcC
Confidence 6788877321 12222 234667777888777765
No 176
>COG3195 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=45.65 E-value=92 Score=26.72 Aligned_cols=97 Identities=11% Similarity=0.077 Sum_probs=62.5
Q ss_pred cHHH-HhcccCcceEEeccC---cchHHHHHHcCCceeeccCC-CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHH
Q 045998 286 SQEK-VLMHAAVSCFLTHCG---WNSTLETVAAGVPVIAYPEW-TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRC 360 (408)
Q Consensus 286 pq~~-lL~h~~v~~fitHgG---~~s~~eal~~GvP~i~~P~~-~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~ 360 (408)
.|.. |-+||++.+-+--.| .-|+.|--.+|.=-+.==-+ .=+..|+.+.++ +|.=..+.- +..++++|..+
T Consensus 64 ~rl~liraHPdLAgk~a~a~elta~S~~EQasAGLd~Ls~~E~a~f~~LN~aY~~r-FgfPfI~aV---kg~~k~~Il~a 139 (176)
T COG3195 64 ERLALIRAHPDLAGKAAIAGELTAESTSEQASAGLDRLSPEEFARFTELNAAYVER-FGFPFIIAV---KGNTKDTILAA 139 (176)
T ss_pred HHHHHHHhChhhHHHHHHHHHhhhhhHHHHHhcCcccCCHHHHHHHHHHHHHHHHh-cCCceEEee---cCCCHHHHHHH
Confidence 4444 345777744333333 34666666666433211000 014569999998 998888876 67789999999
Q ss_pred HHHHhcCCcHHHHHHHHHHHHHHHHH
Q 045998 361 IDEATQGLNATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 361 i~~vl~~~~~~~~~~~a~~l~~~~~~ 386 (408)
.++=+.|.+...++..+.++.+..+-
T Consensus 140 ~~~Rl~n~~e~E~~tAl~eI~rIA~~ 165 (176)
T COG3195 140 FERRLDNDREQEFATALAEIERIALL 165 (176)
T ss_pred HHHHhcccHHHHHHHHHHHHHHHHHH
Confidence 98888876666777777777766543
No 177
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=45.31 E-value=47 Score=28.78 Aligned_cols=107 Identities=18% Similarity=0.181 Sum_probs=69.5
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcce
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSC 298 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~ 298 (408)
.+.|-.+.+|.+. +++++.+...|.+|+..-+..... ..+. .. ...+.+..++|+.+++
T Consensus 36 g~tvgIiG~G~IG-------~~vA~~l~~fG~~V~~~d~~~~~~------~~~~----~~--~~~~~~l~ell~~aDi-- 94 (178)
T PF02826_consen 36 GKTVGIIGYGRIG-------RAVARRLKAFGMRVIGYDRSPKPE------EGAD----EF--GVEYVSLDELLAQADI-- 94 (178)
T ss_dssp TSEEEEESTSHHH-------HHHHHHHHHTT-EEEEEESSCHHH------HHHH----HT--TEEESSHHHHHHH-SE--
T ss_pred CCEEEEEEEcCCc-------CeEeeeeecCCceeEEecccCChh------hhcc----cc--cceeeehhhhcchhhh--
Confidence 4568899999988 578888888999877654432211 1010 11 1256688899999999
Q ss_pred EEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeE-EEeecCCCCCcCHHHHHHHHHH
Q 045998 299 FLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIG-VRMRNEEDGTLSIQQVQRCIDE 363 (408)
Q Consensus 299 fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G-~~l~~~~~~~~~~~~l~~~i~~ 363 (408)
++.|+-.+. ...+..|+..+.. ++-| +.++..+.+.++.+.|.+++++
T Consensus 95 v~~~~plt~----------------~T~~li~~~~l~~-mk~ga~lvN~aRG~~vde~aL~~aL~~ 143 (178)
T PF02826_consen 95 VSLHLPLTP----------------ETRGLINAEFLAK-MKPGAVLVNVARGELVDEDALLDALES 143 (178)
T ss_dssp EEE-SSSST----------------TTTTSBSHHHHHT-STTTEEEEESSSGGGB-HHHHHHHHHT
T ss_pred hhhhhcccc----------------ccceeeeeeeeec-cccceEEEeccchhhhhhhHHHHHHhh
Confidence 888864332 1356778888887 6644 5666666678888999888864
No 178
>PRK08322 acetolactate synthase; Reviewed
Probab=44.99 E-value=85 Score=32.53 Aligned_cols=29 Identities=17% Similarity=0.291 Sum_probs=23.7
Q ss_pred cCcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 294 AAVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 294 ~~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
-+.+++++|.| .+++.+|...++|+|++-
T Consensus 62 g~~gv~~~t~GpG~~N~~~~i~~A~~~~~Pll~i~ 96 (547)
T PRK08322 62 GKAGVCLSTLGPGATNLVTGVAYAQLGGMPMVAIT 96 (547)
T ss_pred CCCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEe
Confidence 34566999988 448899999999999985
No 179
>PRK07710 acetolactate synthase catalytic subunit; Reviewed
Probab=44.95 E-value=59 Score=33.99 Aligned_cols=29 Identities=7% Similarity=0.297 Sum_probs=23.4
Q ss_pred cCcceEEeccCcc------hHHHHHHcCCceeecc
Q 045998 294 AAVSCFLTHCGWN------STLETVAAGVPVIAYP 322 (408)
Q Consensus 294 ~~v~~fitHgG~~------s~~eal~~GvP~i~~P 322 (408)
-+.+++++|.|-| ++.+|...++|+|++-
T Consensus 77 g~~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~It 111 (571)
T PRK07710 77 GKPGVVIATSGPGATNVVTGLADAMIDSLPLVVFT 111 (571)
T ss_pred CCCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3455699998855 6789999999999984
No 180
>TIGR00173 menD 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylic-acid synthase. 2-oxoglutarate decarboxylase/SHCHC synthase (menD) is a thiamine pyrophosphate enzyme involved in menaquinone biosynthesis.
Probab=44.91 E-value=1.2e+02 Score=30.47 Aligned_cols=27 Identities=22% Similarity=0.406 Sum_probs=22.4
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeec
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAY 321 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~ 321 (408)
+.+++++|+| .+.+.+|...++|+|++
T Consensus 63 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i 95 (432)
T TIGR00173 63 RPVAVVCTSGTAVANLLPAVIEASYSGVPLIVL 95 (432)
T ss_pred CCEEEEECCcchHhhhhHHHHHhcccCCcEEEE
Confidence 4555899988 44788999999999999
No 181
>COG2159 Predicted metal-dependent hydrolase of the TIM-barrel fold [General function prediction only]
Probab=44.35 E-value=98 Score=29.36 Aligned_cols=95 Identities=13% Similarity=0.068 Sum_probs=56.2
Q ss_pred hhhhhhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccH
Q 045998 208 IEIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQ 287 (408)
Q Consensus 208 ~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq 287 (408)
.|++.+..+..-.++-.-.........+..+..+.++.++.|.++++-+|...... .+.. .....+.=.
T Consensus 116 ~E~er~v~~~gf~g~~l~p~~~~~~~~~~~~~pi~~~a~~~gvpv~ihtG~~~~~~--~~~~---------~~~~p~~~~ 184 (293)
T COG2159 116 EELERRVRELGFVGVKLHPVAQGFYPDDPRLYPIYEAAEELGVPVVIHTGAGPGGA--GLEK---------GHSDPLYLD 184 (293)
T ss_pred HHHHHHHHhcCceEEEecccccCCCCCChHHHHHHHHHHHcCCCEEEEeCCCCCCc--cccc---------CCCCchHHH
Confidence 45556666543333444333344445566688999999999999999666542210 0110 001112223
Q ss_pred HHHhcccCcceEEeccC--cchHHHHHH
Q 045998 288 EKVLMHAAVSCFLTHCG--WNSTLETVA 313 (408)
Q Consensus 288 ~~lL~h~~v~~fitHgG--~~s~~eal~ 313 (408)
.-...+|+++.++.|+| ..-..|++.
T Consensus 185 ~va~~fP~l~IVl~H~G~~~p~~~~a~~ 212 (293)
T COG2159 185 DVARKFPELKIVLGHMGEDYPWELEAIE 212 (293)
T ss_pred HHHHHCCCCcEEEEecCCCCchhHHHHH
Confidence 34567789999999999 666666643
No 182
>PRK07525 sulfoacetaldehyde acetyltransferase; Validated
Probab=43.92 E-value=1.2e+02 Score=31.96 Aligned_cols=80 Identities=9% Similarity=0.006 Sum_probs=44.3
Q ss_pred HHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEe--------cccHHHHhcccCcceEEeccC----
Q 045998 237 QIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVK--------WCSQEKVLMHAAVSCFLTHCG---- 304 (408)
Q Consensus 237 ~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~--------w~pq~~lL~h~~v~~fitHgG---- 304 (408)
..+.+++.|++.|.+.|+-+...... .+-+.+. ..++..+. ++=...-....+.+++++|.|
T Consensus 8 ~~~~l~~~L~~~GV~~vFGvpG~~~~---~l~dal~---~~~i~~i~~rhE~~A~~~Adgyar~tg~~gv~~~t~GPG~~ 81 (588)
T PRK07525 8 PSEAFVETLQAHGITHAFGIIGSAFM---DASDLFP---PAGIRFIDVAHEQNAGHMADGYTRVTGRMGMVIGQNGPGIT 81 (588)
T ss_pred HHHHHHHHHHHcCCCEEEEeCCCchH---HHHHHHh---ccCCCEEEecCHHHHHHHHHHHHHHhCCCEEEEEcCCccHH
Confidence 34567777777777777765443221 1111221 11222221 111111122334566999988
Q ss_pred --cchHHHHHHcCCceeecc
Q 045998 305 --WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 305 --~~s~~eal~~GvP~i~~P 322 (408)
.+++.+|...++|+|++-
T Consensus 82 n~~~gi~~A~~~~~Pvl~I~ 101 (588)
T PRK07525 82 NFVTAVATAYWAHTPVVLVT 101 (588)
T ss_pred HHHHHHHHHhhcCCCEEEEe
Confidence 447789999999999995
No 183
>PRK08979 acetolactate synthase 3 catalytic subunit; Validated
Probab=43.67 E-value=74 Score=33.27 Aligned_cols=29 Identities=14% Similarity=0.268 Sum_probs=23.7
Q ss_pred cCcceEEeccCc------chHHHHHHcCCceeecc
Q 045998 294 AAVSCFLTHCGW------NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 294 ~~v~~fitHgG~------~s~~eal~~GvP~i~~P 322 (408)
-+.+++++|.|- +++.+|...++|||++-
T Consensus 66 g~~gv~~~t~GpG~~n~l~gia~A~~~~~Pvl~i~ 100 (572)
T PRK08979 66 GKVGVVLVTSGPGATNTITGIATAYMDSIPMVVLS 100 (572)
T ss_pred CCCeEEEECCCchHhHHHHHHHHHhhcCCCEEEEe
Confidence 356669999884 47899999999999985
No 184
>cd07062 Peptidase_S66_mccF_like Microcin C7 self-immunity protein determines resistance to exogenous microcin C7. Microcin C7 self-immunity protein (mccF): MccF, a homolog of the LD-carboxypeptidase family, mediates resistance against exogenously added microcin C7 (MccC7), a ribosomally-encoded peptide antibiotic that contains a phosphoramidate linkage to adenosine monophosphate at its C-terminus. The plasmid-encoded mccF gene is transcribed in the opposite direction to the other five genes (mccA-E) and is required for the full expression of immunity but not for production. The catalytic triad residues (Ser, His, Glu) of LD-carboxypeptidase are also conserved in MccF, strongly suggesting that MccF shares the hydrolytic activity with LD-carboxypeptidases. Substrates of MccF have not been deduced, but could likely be microcin C7 precursors. The possible role of MccF is to defend producer cells against exogenous microcin from re-entering after having been exported. It is suggested that M
Probab=42.91 E-value=48 Score=31.66 Aligned_cols=74 Identities=8% Similarity=0.127 Sum_probs=46.6
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHH
Q 045998 233 LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETV 312 (408)
Q Consensus 233 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal 312 (408)
.+.+..+++.+++.+...+.||.++.+... .++.++++...+-.||++ ||=..-...++-++
T Consensus 50 ~~~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~----------------~rlL~~lD~~~i~~~PK~--fiGySDiTaL~~al 111 (308)
T cd07062 50 SPEERAEELMAAFADPSIKAIIPTIGGDDS----------------NELLPYLDYELIKKNPKI--FIGYSDITALHLAI 111 (308)
T ss_pred CHHHHHHHHHHHhcCCCCCEEEECCcccCH----------------hhhhhhcCHHHHhhCCCE--EEeccHHHHHHHHH
Confidence 356778999999999999999988765321 123334444445556655 66666666666665
Q ss_pred H--cCCceeeccCC
Q 045998 313 A--AGVPVIAYPEW 324 (408)
Q Consensus 313 ~--~GvP~i~~P~~ 324 (408)
+ +|++.+--|..
T Consensus 112 ~~~~g~~t~hGp~~ 125 (308)
T cd07062 112 YKKTGLVTYYGPNL 125 (308)
T ss_pred HHhcCCeEEECccc
Confidence 3 25555555543
No 185
>cd03412 CbiK_N Anaerobic cobalamin biosynthetic cobalt chelatase (CbiK), N-terminal domain. CbiK is part of the cobalt-early path for cobalamin biosynthesis. It catalyzes the insertion of cobalt into the oxidized form of precorrin-2, factor II (sirohydrochlorin), the second step of the anaerobic branch of vitamin B12 biosynthesis. CbiK belongs to the class II family of chelatases and is a homomeric enzyme that does not require ATP for its enzymatic activity.
Probab=42.82 E-value=44 Score=27.28 Aligned_cols=37 Identities=19% Similarity=0.445 Sum_probs=27.9
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHh--CCCCEEEEEe
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALIN--TKRPFLWVIR 257 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~--~~~~~iw~~~ 257 (408)
.+++++|||...-..+.+..+.+.+.+ .+..|-|.+-
T Consensus 2 aillv~fGS~~~~~~~~~~~i~~~l~~~~p~~~V~~aft 40 (127)
T cd03412 2 AILLVSFGTSYPTAEKTIDAIEDKVRAAFPDYEVRWAFT 40 (127)
T ss_pred eEEEEeCCCCCHHHHHHHHHHHHHHHHHCCCCeEEEEec
Confidence 589999999987555678888888865 4567777654
No 186
>PRK08199 thiamine pyrophosphate protein; Validated
Probab=42.40 E-value=1.3e+02 Score=31.31 Aligned_cols=29 Identities=10% Similarity=0.108 Sum_probs=23.5
Q ss_pred cCcceEEeccCc------chHHHHHHcCCceeecc
Q 045998 294 AAVSCFLTHCGW------NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 294 ~~v~~fitHgG~------~s~~eal~~GvP~i~~P 322 (408)
-+.+++++|.|- +.+.+|...++|+|++-
T Consensus 70 g~~gv~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 104 (557)
T PRK08199 70 GRPGICFVTRGPGATNASIGVHTAFQDSTPMILFV 104 (557)
T ss_pred CCCEEEEeCCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 345669999884 47899999999999883
No 187
>PRK08527 acetolactate synthase 3 catalytic subunit; Validated
Probab=42.19 E-value=73 Score=33.25 Aligned_cols=28 Identities=11% Similarity=0.228 Sum_probs=23.3
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
+.+++++|.| .+++.+|...++|+|++-
T Consensus 66 ~~gv~~~t~GpG~~n~~~gla~A~~~~~Pvl~i~ 99 (563)
T PRK08527 66 KVGVAIVTSGPGFTNAVTGLATAYMDSIPLVLIS 99 (563)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 4566999988 458899999999999984
No 188
>PRK06456 acetolactate synthase catalytic subunit; Reviewed
Probab=41.66 E-value=83 Score=32.87 Aligned_cols=28 Identities=18% Similarity=0.182 Sum_probs=22.9
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
..+++++|.| .+.+.+|...++|||++-
T Consensus 68 ~~gv~~~t~GpG~~N~l~gi~~A~~~~~Pvl~i~ 101 (572)
T PRK06456 68 VPGVCTATSGPGTTNLVTGLITAYWDSSPVIAIT 101 (572)
T ss_pred CCEEEEeCCCCCHHHHHHHHHHHHhhCCCEEEEe
Confidence 4455888888 447799999999999985
No 189
>PRK07418 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=41.64 E-value=1.4e+02 Score=31.67 Aligned_cols=29 Identities=14% Similarity=0.237 Sum_probs=23.9
Q ss_pred cCcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 294 AAVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 294 ~~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
-+++++++|.| .+++.+|...++|+|++-
T Consensus 84 gk~gv~~~t~GPG~~n~l~gl~~A~~d~~Pvl~i~ 118 (616)
T PRK07418 84 GKVGVCFGTSGPGATNLVTGIATAQMDSVPMVVIT 118 (616)
T ss_pred CCCeEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 34566999988 558899999999999983
No 190
>PRK12446 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase; Reviewed
Probab=41.41 E-value=1.2e+02 Score=29.53 Aligned_cols=96 Identities=14% Similarity=0.129 Sum_probs=53.6
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccch-hhhh-hcCCCeEEE--ec------------
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRA-GFLE-ETKDRGLVV--KW------------ 284 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~-~~~~-~~~~n~~v~--~w------------ 284 (408)
.+++.+-||-....+. .++++.|++.++.++|+....+... ..+|+ ++.- .++....-. .|
T Consensus 3 ~i~~~~GGTGGHi~Pa--la~a~~l~~~g~~v~~vg~~~~~e~-~l~~~~g~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 79 (352)
T PRK12446 3 KIVFTGGGSAGHVTPN--LAIIPYLKEDNWDISYIGSHQGIEK-TIIEKENIPYYSISSGKLRRYFDLKNIKDPFLVMKG 79 (352)
T ss_pred eEEEEcCCcHHHHHHH--HHHHHHHHhCCCEEEEEECCCcccc-ccCcccCCcEEEEeccCcCCCchHHHHHHHHHHHHH
Confidence 4677777776644332 3566777778899999875543220 01221 1100 010000000 01
Q ss_pred -ccHHHHhc--ccCcceEEeccCcch---HHHHHHcCCceeec
Q 045998 285 -CSQEKVLM--HAAVSCFLTHCGWNS---TLETVAAGVPVIAY 321 (408)
Q Consensus 285 -~pq~~lL~--h~~v~~fitHgG~~s---~~eal~~GvP~i~~ 321 (408)
.--..++. .|++ +|+|||.-| ++.|...|+|+++.
T Consensus 80 ~~~~~~i~~~~kPdv--vi~~Ggy~s~p~~~aa~~~~~p~~i~ 120 (352)
T PRK12446 80 VMDAYVRIRKLKPDV--IFSKGGFVSVPVVIGGWLNRVPVLLH 120 (352)
T ss_pred HHHHHHHHHhcCCCE--EEecCchhhHHHHHHHHHcCCCEEEE
Confidence 01112333 4666 999999987 89999999999874
No 191
>PRK06932 glycerate dehydrogenase; Provisional
Probab=41.16 E-value=1.2e+02 Score=28.99 Aligned_cols=101 Identities=15% Similarity=0.147 Sum_probs=64.8
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcce
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSC 298 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~ 298 (408)
.+.+..|.+|.+. +++++-++..|.+++.. ..... .. ....+.+..++|+.+++
T Consensus 147 gktvgIiG~G~IG-------~~va~~l~~fg~~V~~~-~~~~~-------~~---------~~~~~~~l~ell~~sDi-- 200 (314)
T PRK06932 147 GSTLGVFGKGCLG-------TEVGRLAQALGMKVLYA-EHKGA-------SV---------CREGYTPFEEVLKQADI-- 200 (314)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhcCCCEEEEE-CCCcc-------cc---------cccccCCHHHHHHhCCE--
Confidence 3468899999988 56777777888887642 21100 00 01235678899999999
Q ss_pred EEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceee-eEEEeecCCCCCcCHHHHHHHHH
Q 045998 299 FLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFK-IGVRMRNEEDGTLSIQQVQRCID 362 (408)
Q Consensus 299 fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~ 362 (408)
++-|+-.+.-. ....|+..+.. ++ -++.++..+...++.+.|.++++
T Consensus 201 v~l~~Plt~~T----------------~~li~~~~l~~-mk~ga~lIN~aRG~~Vde~AL~~aL~ 248 (314)
T PRK06932 201 VTLHCPLTETT----------------QNLINAETLAL-MKPTAFLINTGRGPLVDEQALLDALE 248 (314)
T ss_pred EEEcCCCChHH----------------hcccCHHHHHh-CCCCeEEEECCCccccCHHHHHHHHH
Confidence 88888654432 34556666666 44 33444555556777777777776
No 192
>TIGR00118 acolac_lg acetolactate synthase, large subunit, biosynthetic type. Several isozymes of this enzyme are found in E. coli K12, one of which contains a frameshift in the large subunit gene and is not expressed.
Probab=40.95 E-value=77 Score=32.97 Aligned_cols=28 Identities=14% Similarity=0.357 Sum_probs=23.4
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
+.+++++|.| .+++.+|...++|+|++-
T Consensus 64 ~~gv~~~t~GpG~~n~l~~i~~A~~~~~Pvl~i~ 97 (558)
T TIGR00118 64 KVGVVLVTSGPGATNLVTGIATAYMDSIPMVVFT 97 (558)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 4566999988 457899999999999984
No 193
>KOG0202 consensus Ca2+ transporting ATPase [Inorganic ion transport and metabolism]
Probab=40.59 E-value=3.5e+02 Score=29.75 Aligned_cols=164 Identities=15% Similarity=0.131 Sum_probs=95.5
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccc---c--ccchhhhhhcCCCeEE---EecccHH---
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEG---G--VLRAGFLEETKDRGLV---VKWCSQE--- 288 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~---~--~lp~~~~~~~~~n~~v---~~w~pq~--- 288 (408)
...+|+.+=-+...|......-++.+.+.|.+|+.++|++..++. + .+...-. .++...+. .+-+|..
T Consensus 571 ~~LtFvGlVGi~DPPR~ev~~ai~~c~~aGIrV~mITGD~~~TA~AI~r~iGi~~~~e-d~~~~~~TG~efD~ls~~~~~ 649 (972)
T KOG0202|consen 571 SDLTFVGLVGILDPPRPEVADAIELCRQAGIRVIMITGDNKETAEAIAREIGIFSEDE-DVSSMALTGSEFDDLSDEELD 649 (972)
T ss_pred cceEEEEEeeccCCCchhHHHHHHHHHHcCCEEEEEcCCCHHHHHHHHHHhCCCcCCc-cccccccchhhhhcCCHHHHH
Confidence 358888886677778888888999999999999999998743200 0 0000000 00011111 1112211
Q ss_pred HHhcccCcceEEeccC---cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHh
Q 045998 289 KVLMHAAVSCFLTHCG---WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG---~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl 365 (408)
++..++. ++..+- ---+.|++..--=++++ .+|--.-|-.+.. ..+|+.... -..+--++|-+=+|
T Consensus 650 ~~~~~~~---vFaR~~P~HK~kIVeaLq~~geivAM--TGDGVNDApALK~-AdIGIAMG~-----~GTdVaKeAsDMVL 718 (972)
T KOG0202|consen 650 DAVRRVL---VFARAEPQHKLKIVEALQSRGEVVAM--TGDGVNDAPALKK-ADIGIAMGI-----SGTDVAKEASDMVL 718 (972)
T ss_pred HHhhcce---EEEecCchhHHHHHHHHHhcCCEEEe--cCCCccchhhhhh-cccceeecC-----CccHhhHhhhhcEE
Confidence 2222222 333333 22467777766665554 5777777766776 778887742 23444455666677
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 366 QGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
.|++..+ +-.|+++|-+-..|++.||+++.
T Consensus 719 ~DDnFst-----------IvaAVEEGr~IynNik~Fir~~l 748 (972)
T KOG0202|consen 719 ADDNFST-----------IVAAVEEGRAIYNNIKNFIRYLL 748 (972)
T ss_pred ecCcHHH-----------HHHHHHHhHHHHHHHHHHHHHHH
Confidence 7743322 33456777778889999998874
No 194
>PF06180 CbiK: Cobalt chelatase (CbiK); InterPro: IPR010388 This group, typified by Salmonella typhimurium CbiK, contains anaerobic cobalt chelatases that act in the anaerobic cobalamin biosynthesis pathway [, ]. Cobalamin (vitamin B12) can be complexed with metal via ATP-dependent reactions (aerobic pathway) (e.g., in Pseudomonas denitrificans) or via ATP-independent reactions (anaerobic pathway) (e.g., in S. typhimurium) [, ]. The corresponding cobalt chelatases are not homologous. This group belongs to the class of ATP-independent, single-subunit chelatases that also includes distantly related protoporphyrin IX (PPIX) ferrochelatase (HemH) (Class II chelatases) []. The structure of S. typhimurium CbiK shows that it has a remarkably similar topology to Bacillus subtilis ferrochelatase despite only weak sequence conservation []. Both enzymes contain a histidine residue identified as the metal ion ligand, but CbiK contains a second histidine in place of the glutamic acid residue identified as a general base in PPIX ferrochelatase []. Site-directed mutagenesis has confirmed a role for this histidine and a nearby glutamic acid in cobalt binding, modulating metal ion specificity as well as catalytic efficiency []. It should be noted that CysG and Met8p, which are multifunctional proteins associated with siroheme biosynthesis, include chelatase activity and can therefore be considered as the third class of chelatases []. As with the class II chelatases, they do not require ATP for activity. However, they are not structurally similar to HemH or CbiK, and it is likely that they have arisen by the acquisition of a chelatase function within a dehydrogenase catalytic framework [, ].; GO: 0016852 sirohydrochlorin cobaltochelatase activity; PDB: 1QGO_A 2XWP_A 2XVZ_A 2XVX_A 2XVY_A.
Probab=40.40 E-value=36 Score=31.76 Aligned_cols=38 Identities=21% Similarity=0.333 Sum_probs=25.3
Q ss_pred ceEEEecCCcccCCHH-HHHHHHHHHHh--CCCCEEEEEec
Q 045998 221 SVIYISFGSLLVLSQN-QIDSIAAALIN--TKRPFLWVIRS 258 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~-~~~~~~~al~~--~~~~~iw~~~~ 258 (408)
.++++||||...-..+ -+..+-+.+++ .+..|.|.+.+
T Consensus 2 AIllvsFGTs~~~ar~~ti~~ie~~~~~~fp~~~V~~AfTS 42 (262)
T PF06180_consen 2 AILLVSFGTSYPEAREKTIDAIEKAVREAFPDYDVRRAFTS 42 (262)
T ss_dssp EEEEEE---S-CCCCHHHHHHHHHHHHHCSTTSEEEEEES-
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHHHHHHHCCCCcEEEEchH
Confidence 4899999999865554 67777777777 67889998755
No 195
>PRK08155 acetolactate synthase catalytic subunit; Validated
Probab=40.30 E-value=81 Score=32.91 Aligned_cols=81 Identities=9% Similarity=0.022 Sum_probs=46.6
Q ss_pred HHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH--HH-------hcccCcceEEeccCc-
Q 045998 236 NQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE--KV-------LMHAAVSCFLTHCGW- 305 (408)
Q Consensus 236 ~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~--~l-------L~h~~v~~fitHgG~- 305 (408)
...+.+++.|++.|.+.+.-+...... .+-+.+.+ .+++..+. +.++ +. ..+-..+++++|.|-
T Consensus 14 ~~~~~l~~~L~~~GV~~vFgvpG~~~~---~l~dal~~--~~~i~~i~-~~hE~~A~~~Adgyar~tg~~gv~~~t~GpG 87 (564)
T PRK08155 14 TGAELIVRLLERQGIRIVTGIPGGAIL---PLYDALSQ--STQIRHIL-ARHEQGAGFIAQGMARTTGKPAVCMACSGPG 87 (564)
T ss_pred cHHHHHHHHHHHcCCCEEEeCCCcccH---HHHHHHhc--cCCceEEE-eccHHHHHHHHHHHHHHcCCCeEEEECCCCc
Confidence 346678888888888877765443221 12122211 12333332 1121 11 122344558888884
Q ss_pred -----chHHHHHHcCCceeecc
Q 045998 306 -----NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 306 -----~s~~eal~~GvP~i~~P 322 (408)
+++.+|...++|+|++-
T Consensus 88 ~~N~l~gl~~A~~~~~Pvl~i~ 109 (564)
T PRK08155 88 ATNLVTAIADARLDSIPLVCIT 109 (564)
T ss_pred HHHHHHHHHHHHhcCCCEEEEe
Confidence 47899999999999985
No 196
>PRK06487 glycerate dehydrogenase; Provisional
Probab=40.15 E-value=1.4e+02 Score=28.61 Aligned_cols=101 Identities=12% Similarity=0.095 Sum_probs=62.7
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcce
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSC 298 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~ 298 (408)
.+.+-.|.+|.+. +++++-+...|.+++..-.. .. + . ...++...++|+.+++
T Consensus 148 gktvgIiG~G~IG-------~~vA~~l~~fgm~V~~~~~~-~~------~--------~---~~~~~~l~ell~~sDi-- 200 (317)
T PRK06487 148 GKTLGLLGHGELG-------GAVARLAEAFGMRVLIGQLP-GR------P--------A---RPDRLPLDELLPQVDA-- 200 (317)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhCCCEEEEECCC-CC------c--------c---cccccCHHHHHHhCCE--
Confidence 4568999999988 56777777888887653211 00 0 0 1234577889999998
Q ss_pred EEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeee-EEEeecCCCCCcCHHHHHHHHHH
Q 045998 299 FLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKI-GVRMRNEEDGTLSIQQVQRCIDE 363 (408)
Q Consensus 299 fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~~~~~l~~~i~~ 363 (408)
++-|+-.+.-. ....|+..+.. ++= ++.++..+...++.+.|.++++.
T Consensus 201 v~l~lPlt~~T----------------~~li~~~~~~~-mk~ga~lIN~aRG~vVde~AL~~AL~~ 249 (317)
T PRK06487 201 LTLHCPLTEHT----------------RHLIGARELAL-MKPGALLINTARGGLVDEQALADALRS 249 (317)
T ss_pred EEECCCCChHH----------------hcCcCHHHHhc-CCCCeEEEECCCccccCHHHHHHHHHc
Confidence 88887554322 34456666665 443 34444444566677777776653
No 197
>PF06925 MGDG_synth: Monogalactosyldiacylglycerol (MGDG) synthase; InterPro: IPR009695 This entry represents a conserved region of approximately 180 residues found towirds the N terminus of a number of plant and bacterial diacylglycerol glucosyltransferases, such as monogalactosyldiacylglycerol synthase [].; GO: 0016758 transferase activity, transferring hexosyl groups, 0009247 glycolipid biosynthetic process
Probab=40.11 E-value=92 Score=26.55 Aligned_cols=30 Identities=17% Similarity=0.125 Sum_probs=17.5
Q ss_pred CCccEEEECCCCCcHH--HHHH---Hc-CCCeEEEe
Q 045998 60 KKKSCIITNPFMPWVP--DVAA---EH-KIPCAVLW 89 (408)
Q Consensus 60 ~~~D~vI~D~~~~~~~--~vA~---~l-gIP~v~~~ 89 (408)
.+||+||+-..+.... ...+ .+ ++|.+.+.
T Consensus 88 ~~PD~IIsThp~~~~~~l~~lk~~~~~~~~p~~tvv 123 (169)
T PF06925_consen 88 FQPDLIISTHPFPAQVPLSRLKRRGRLPNIPVVTVV 123 (169)
T ss_pred cCCCEEEECCcchhhhHHHHHHHhhcccCCcEEEEE
Confidence 5899999987664333 2122 23 46766553
No 198
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=39.77 E-value=2.8e+02 Score=26.57 Aligned_cols=104 Identities=11% Similarity=0.051 Sum_probs=58.2
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceE
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCF 299 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~f 299 (408)
+.+.+|.+|++. +.+++-+...|.+++.. ..... ..+ ++ ........-.++|+.+++ +
T Consensus 137 ~tvgIvG~G~IG-------~~vA~~l~afG~~V~~~-~~~~~----~~~-~~-------~~~~~~~~l~e~l~~aDv--v 194 (312)
T PRK15469 137 FTIGILGAGVLG-------SKVAQSLQTWGFPLRCW-SRSRK----SWP-GV-------QSFAGREELSAFLSQTRV--L 194 (312)
T ss_pred CEEEEECCCHHH-------HHHHHHHHHCCCEEEEE-eCCCC----CCC-Cc-------eeecccccHHHHHhcCCE--E
Confidence 468899999988 56777788888886542 22110 000 00 011123345678999999 8
Q ss_pred EeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceee-eEEEeecCCCCCcCHHHHHHHHH
Q 045998 300 LTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFK-IGVRMRNEEDGTLSIQQVQRCID 362 (408)
Q Consensus 300 itHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~ 362 (408)
+.|+-.+.-.+.+ .|+..+.. ++ -++.++..+...++.+.|.++++
T Consensus 195 v~~lPlt~~T~~l----------------i~~~~l~~-mk~ga~lIN~aRG~vVde~aL~~aL~ 241 (312)
T PRK15469 195 INLLPNTPETVGI----------------INQQLLEQ-LPDGAYLLNLARGVHVVEDDLLAALD 241 (312)
T ss_pred EECCCCCHHHHHH----------------hHHHHHhc-CCCCcEEEECCCccccCHHHHHHHHh
Confidence 8888766554432 23333333 22 12344444445566666666554
No 199
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=39.69 E-value=3.9e+02 Score=26.43 Aligned_cols=165 Identities=17% Similarity=0.155 Sum_probs=98.1
Q ss_pred hhhhhhhhccCCCCceEEEecCCcc-----cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccc------hhhhhhc
Q 045998 207 CIEIHQWLNKKPPSSVIYISFGSLL-----VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLR------AGFLEET 275 (408)
Q Consensus 207 ~~~l~~~l~~~~~~~vvyvs~GS~~-----~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp------~~~~~~~ 275 (408)
-+.+...|.+.++++||+.- |.-. .++.++-..+++.+++.+.-.+.=+...+... .+. .-|.+..
T Consensus 159 f~~mla~L~~a~~~~vvLLH-~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~--GleeDa~~lR~~a~~~ 235 (396)
T COG1448 159 FDGMLADLKTAPEGSVVLLH-GCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFAD--GLEEDAYALRLFAEVG 235 (396)
T ss_pred HHHHHHHHHhCCCCCEEEEe-cCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhcc--chHHHHHHHHHHHHhC
Confidence 34455777888888777764 3322 56789999999999987764444332222110 010 1122222
Q ss_pred CCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHH
Q 045998 276 KDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQ 355 (408)
Q Consensus 276 ~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~ 355 (408)
...+|..-..-.-=|=..+||+|.-.+--..+...+..-++.++--.+.--+.+..+++. ..++..
T Consensus 236 -~~~lva~S~SKnfgLYgERVGa~~vva~~~~~a~~v~sqlk~~iR~~ySnPP~~Ga~vva-------------~IL~~p 301 (396)
T COG1448 236 -PELLVASSFSKNFGLYGERVGALSVVAEDAEEADRVLSQLKAIIRTNYSNPPAHGAAVVA-------------TILNNP 301 (396)
T ss_pred -CcEEEEehhhhhhhhhhhccceeEEEeCCHHHHHHHHHHHHHHHHhccCCCchhhHHHHH-------------HHhCCH
Confidence 225666555555556667888888887666666666555555555555444444444443 233445
Q ss_pred HHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCC
Q 045998 356 QVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGS 393 (408)
Q Consensus 356 ~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~ 393 (408)
+|+.-=.+-+ ..||++..+|+..+.+++.+-|.
T Consensus 302 ~Lra~W~~El-----~~Mr~Ri~~mR~~lv~~L~~~~~ 334 (396)
T COG1448 302 ELRAEWEQEL-----EEMRQRILEMRQALVDALKALGA 334 (396)
T ss_pred HHHHHHHHHH-----HHHHHHHHHHHHHHHHHHHhhCC
Confidence 5554444333 47999999999999998877443
No 200
>PF02776 TPP_enzyme_N: Thiamine pyrophosphate enzyme, N-terminal TPP binding domain; InterPro: IPR012001 A number of enzymes require thiamine pyrophosphate (TPP) (vitamin B1) as a cofactor. It has been shown [] that some of these enzymes are structurally related. This represents the N-terminal TPP binding domain of TPP enzymes.; GO: 0030976 thiamine pyrophosphate binding; PDB: 3HWX_1 3FLM_B 3HWW_A 2JLC_A 2JLA_A 2VBG_A 2VBF_B 2Q29_A 2Q27_B 2Q28_B ....
Probab=39.56 E-value=68 Score=27.48 Aligned_cols=30 Identities=13% Similarity=0.253 Sum_probs=22.6
Q ss_pred cCcceEEeccC------cchHHHHHHcCCceeeccC
Q 045998 294 AAVSCFLTHCG------WNSTLETVAAGVPVIAYPE 323 (408)
Q Consensus 294 ~~v~~fitHgG------~~s~~eal~~GvP~i~~P~ 323 (408)
.+.+++++|.| .+++.+|...++|+|++.-
T Consensus 63 g~~~v~~~~~GpG~~n~~~~l~~A~~~~~Pvl~i~g 98 (172)
T PF02776_consen 63 GRPGVVIVTSGPGATNALTGLANAYADRIPVLVITG 98 (172)
T ss_dssp SSEEEEEEETTHHHHTTHHHHHHHHHTT-EEEEEEE
T ss_pred ccceEEEeecccchHHHHHHHhhcccceeeEEEEec
Confidence 44555899987 4577889999999999864
No 201
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=39.13 E-value=2e+02 Score=25.55 Aligned_cols=105 Identities=15% Similarity=0.164 Sum_probs=69.3
Q ss_pred HHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcC
Q 045998 236 NQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAG 315 (408)
Q Consensus 236 ~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~G 315 (408)
..-.++++.|.+.+..++...|... -|.+.|.++.+++++- -||++ .=.++|..+..+|+.+|
T Consensus 66 ~~d~~l~~~l~~~~~dlvvLAGyMr-----IL~~~fl~~~~grIlN----------IHPSL--LP~f~G~h~~~~A~~aG 128 (200)
T COG0299 66 AFDRALVEALDEYGPDLVVLAGYMR-----ILGPEFLSRFEGRILN----------IHPSL--LPAFPGLHAHEQALEAG 128 (200)
T ss_pred HHHHHHHHHHHhcCCCEEEEcchHH-----HcCHHHHHHhhcceEe----------cCccc--ccCCCCchHHHHHHHcC
Confidence 3455699999999999888776642 4567777666554432 37888 88899999999999999
Q ss_pred CceeeccCC--CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHH
Q 045998 316 VPVIAYPEW--TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 316 vP~i~~P~~--~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~v 364 (408)
+..-++-.. .+..+-.-.+.+ ..+-+. ..-|.|+|.+.|.+.
T Consensus 129 ~k~sG~TVH~V~e~vD~GpII~Q---~~Vpv~----~~Dt~etl~~RV~~~ 172 (200)
T COG0299 129 VKVSGCTVHFVTEGVDTGPIIAQ---AAVPVL----PGDTAETLEARVLEQ 172 (200)
T ss_pred CCccCcEEEEEccCCCCCCeEEE---Eeeeec----CCCCHHHHHHHHHHH
Confidence 998776542 233333322332 222222 223888888888664
No 202
>PRK07064 hypothetical protein; Provisional
Probab=37.90 E-value=1.1e+02 Score=31.57 Aligned_cols=28 Identities=25% Similarity=0.450 Sum_probs=23.1
Q ss_pred CcceEEeccCc------chHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGW------NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~------~s~~eal~~GvP~i~~P 322 (408)
+.+++++|.|- +++.+|...++|+|++-
T Consensus 66 ~~~v~~~t~GpG~~N~~~~i~~A~~~~~Pvl~i~ 99 (544)
T PRK07064 66 GLGVALTSTGTGAGNAAGALVEALTAGTPLLHIT 99 (544)
T ss_pred CCeEEEeCCCCcHHHHHHHHHHHHhcCCCEEEEe
Confidence 45569999884 47899999999999984
No 203
>PRK04885 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=37.56 E-value=65 Score=30.09 Aligned_cols=53 Identities=9% Similarity=0.115 Sum_probs=36.2
Q ss_pred ccCcceEEeccCcchHHHHHH------cCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 293 HAAVSCFLTHCGWNSTLETVA------AGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 293 h~~v~~fitHgG~~s~~eal~------~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
.+++ +|+-||=||++.++. .++|++++-.. .+|.. ..+..+++.++++++++
T Consensus 35 ~~Dl--vi~iGGDGT~L~a~~~~~~~~~~iPilGIN~G--------------~lGFL------~~~~~~~~~~~l~~i~~ 92 (265)
T PRK04885 35 NPDI--VISVGGDGTLLSAFHRYENQLDKVRFVGVHTG--------------HLGFY------TDWRPFEVDKLVIALAK 92 (265)
T ss_pred CCCE--EEEECCcHHHHHHHHHhcccCCCCeEEEEeCC--------------Cceec------ccCCHHHHHHHHHHHHc
Confidence 3556 999999999999976 48898887421 12221 23456777777777776
Q ss_pred C
Q 045998 367 G 367 (408)
Q Consensus 367 ~ 367 (408)
+
T Consensus 93 g 93 (265)
T PRK04885 93 D 93 (265)
T ss_pred C
Confidence 4
No 204
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=37.05 E-value=34 Score=29.62 Aligned_cols=33 Identities=15% Similarity=0.249 Sum_probs=22.4
Q ss_pred cccCcceEEeccCcchHHHHHHcCCceeeccCCC
Q 045998 292 MHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWT 325 (408)
Q Consensus 292 ~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~ 325 (408)
.+..+..+|++||...++.... ++|+|-+|..+
T Consensus 31 ~~~g~dViIsRG~ta~~lr~~~-~iPVV~I~~s~ 63 (176)
T PF06506_consen 31 ESEGADVIISRGGTAELLRKHV-SIPVVEIPISG 63 (176)
T ss_dssp TTTT-SEEEEEHHHHHHHHCC--SS-EEEE---H
T ss_pred HhcCCeEEEECCHHHHHHHHhC-CCCEEEECCCH
Confidence 4444455999999999999877 99999999854
No 205
>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional
Probab=36.58 E-value=1.7e+02 Score=28.20 Aligned_cols=105 Identities=10% Similarity=0.137 Sum_probs=60.6
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHH-hCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALI-NTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVS 297 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~-~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~ 297 (408)
.+.+-.|.+|++. +++++-+. ..|.+++..-.... +..... .+ ..+.+..++|+.+++
T Consensus 145 gktvGIiG~G~IG-------~~va~~l~~~fgm~V~~~~~~~~--------~~~~~~--~~---~~~~~l~ell~~sDv- 203 (323)
T PRK15409 145 HKTLGIVGMGRIG-------MALAQRAHFGFNMPILYNARRHH--------KEAEER--FN---ARYCDLDTLLQESDF- 203 (323)
T ss_pred CCEEEEEcccHHH-------HHHHHHHHhcCCCEEEEECCCCc--------hhhHHh--cC---cEecCHHHHHHhCCE-
Confidence 3468899999988 46666665 67888775322111 110000 11 235678899999999
Q ss_pred eEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceee-eEEEeecCCCCCcCHHHHHHHHH
Q 045998 298 CFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFK-IGVRMRNEEDGTLSIQQVQRCID 362 (408)
Q Consensus 298 ~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~ 362 (408)
++-|+-.+.-.+. ..|+..+.. ++ -++.++..+...++.+.|.++++
T Consensus 204 -v~lh~plt~~T~~----------------li~~~~l~~-mk~ga~lIN~aRG~vVde~AL~~AL~ 251 (323)
T PRK15409 204 -VCIILPLTDETHH----------------LFGAEQFAK-MKSSAIFINAGRGPVVDENALIAALQ 251 (323)
T ss_pred -EEEeCCCChHHhh----------------ccCHHHHhc-CCCCeEEEECCCccccCHHHHHHHHH
Confidence 9888876543322 334444444 33 23344444445666666666665
No 206
>PRK11269 glyoxylate carboligase; Provisional
Probab=35.87 E-value=1.6e+02 Score=30.89 Aligned_cols=28 Identities=11% Similarity=0.324 Sum_probs=23.2
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
++++.++|.| .+++.+|...++|+|++.
T Consensus 68 ~~gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 101 (591)
T PRK11269 68 NIGVCIGTSGPAGTDMITGLYSASADSIPILCIT 101 (591)
T ss_pred CcEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 4565777777 678999999999999984
No 207
>PRK06882 acetolactate synthase 3 catalytic subunit; Validated
Probab=35.13 E-value=1.6e+02 Score=30.69 Aligned_cols=28 Identities=21% Similarity=0.419 Sum_probs=23.1
Q ss_pred CcceEEeccCc------chHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGW------NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~------~s~~eal~~GvP~i~~P 322 (408)
+.+++++|.|- +++.+|...++|+|++-
T Consensus 67 ~~gv~~~t~GpG~~N~l~~i~~A~~~~~Pvlvi~ 100 (574)
T PRK06882 67 KVGCVLVTSGPGATNAITGIATAYTDSVPLVILS 100 (574)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 45668999884 47899999999999984
No 208
>PRK06466 acetolactate synthase 3 catalytic subunit; Validated
Probab=35.04 E-value=1.1e+02 Score=31.86 Aligned_cols=28 Identities=11% Similarity=0.270 Sum_probs=23.2
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
+.+++++|.| .+++.+|...++|+|++-
T Consensus 67 ~~gv~~vt~GPG~~N~l~gl~~A~~~~~Pvl~i~ 100 (574)
T PRK06466 67 KTGVVLVTSGPGATNAITGIATAYMDSIPMVVLS 100 (574)
T ss_pred CCEEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 3556999988 458899999999999984
No 209
>PRK07282 acetolactate synthase catalytic subunit; Reviewed
Probab=34.77 E-value=1.1e+02 Score=31.94 Aligned_cols=28 Identities=11% Similarity=0.343 Sum_probs=23.0
Q ss_pred CcceEEeccCcc------hHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGWN------STLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~~------s~~eal~~GvP~i~~P 322 (408)
+.+++++|.|-| ++.+|...++|+|++-
T Consensus 73 ~~gv~~~t~GPG~~n~~~gla~A~~~~~Pvl~i~ 106 (566)
T PRK07282 73 KLGVAVVTSGPGATNAITGIADAMSDSVPLLVFT 106 (566)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 456699998844 6789999999999995
No 210
>PF00731 AIRC: AIR carboxylase; InterPro: IPR000031 Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. PurK, N5-carboxyaminoimidazole ribonucleotide (N5_CAIR) synthetase, catalyzes the conversion of 5-aminoimidazole ribonucleotide (AIR), ATP, and bicarbonate to N5-CAIR, ADP, and Pi. PurE converts N5-CAIR to CAIR, the sixth step of de novo purine biosynthesis. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP. Some members of this family contain two copies of this domain []. The crystal structure of PurE indicates a unique quaternary structure that confirms the octameric nature of the enzyme [].; GO: 0004638 phosphoribosylaminoimidazole carboxylase activity, 0006189 'de novo' IMP biosynthetic process; PDB: 3TRH_O 2YWX_A 2NSL_A 1D7A_A 2NSJ_A 1QCZ_A 2ATE_A 2NSH_A 3RG8_C 3RGG_D ....
Probab=34.59 E-value=2.8e+02 Score=23.43 Aligned_cols=137 Identities=14% Similarity=0.143 Sum_probs=69.3
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEe
Q 045998 222 VIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLT 301 (408)
Q Consensus 222 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fit 301 (408)
.|-|-+||.. +....+++...|++.|..+-..+-...+ .|+.+.+ ++ .-+.+...+.||.
T Consensus 2 ~V~Ii~gs~S--D~~~~~~a~~~L~~~gi~~~~~V~saHR-----~p~~l~~----------~~---~~~~~~~~~viIa 61 (150)
T PF00731_consen 2 KVAIIMGSTS--DLPIAEEAAKTLEEFGIPYEVRVASAHR-----TPERLLE----------FV---KEYEARGADVIIA 61 (150)
T ss_dssp EEEEEESSGG--GHHHHHHHHHHHHHTT-EEEEEE--TTT-----SHHHHHH----------HH---HHTTTTTESEEEE
T ss_pred eEEEEeCCHH--HHHHHHHHHHHHHHcCCCEEEEEEeccC-----CHHHHHH----------HH---HHhccCCCEEEEE
Confidence 3556677766 5678888999999988666554443332 2332221 00 1122222333888
Q ss_pred ccCcch----HHHHHHcCCceeeccCCCChhhhH----HhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc--CCcHH
Q 045998 302 HCGWNS----TLETVAAGVPVIAYPEWTDQPTDA----KLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ--GLNAT 371 (408)
Q Consensus 302 HgG~~s----~~eal~~GvP~i~~P~~~DQ~~na----~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~--~~~~~ 371 (408)
=.|... +.-++. -.|+|++|....+.... ..++--.|+++..-. -. +...-.-..-++|. + +
T Consensus 62 ~AG~~a~Lpgvva~~t-~~PVIgvP~~~~~~~g~d~l~S~vqMp~g~pvatv~---i~-~~~nAA~~A~~ILa~~d---~ 133 (150)
T PF00731_consen 62 VAGMSAALPGVVASLT-TLPVIGVPVSSGYLGGLDSLLSIVQMPSGVPVATVG---IN-NGFNAALLAARILALKD---P 133 (150)
T ss_dssp EEESS--HHHHHHHHS-SS-EEEEEE-STTTTTHHHHHHHHT--TTS--EE-S---ST-HHHHHHHHHHHHHHTT----H
T ss_pred ECCCcccchhhheecc-CCCEEEeecCcccccCcccHHHHHhccCCCCceEEE---cc-CchHHHHHHHHHHhcCC---H
Confidence 888553 444433 79999999987654322 222222356554421 01 22333333334443 4 7
Q ss_pred HHHHHHHHHHHHHHH
Q 045998 372 QMKKRAVAWKEAAKK 386 (408)
Q Consensus 372 ~~~~~a~~l~~~~~~ 386 (408)
+++++.+..++..++
T Consensus 134 ~l~~kl~~~~~~~~~ 148 (150)
T PF00731_consen 134 ELREKLRAYREKMKE 148 (150)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc
Confidence 888888888887765
No 211
>CHL00099 ilvB acetohydroxyacid synthase large subunit
Probab=34.54 E-value=2.1e+02 Score=30.04 Aligned_cols=29 Identities=14% Similarity=0.227 Sum_probs=23.7
Q ss_pred cCcceEEeccCcc------hHHHHHHcCCceeecc
Q 045998 294 AAVSCFLTHCGWN------STLETVAAGVPVIAYP 322 (408)
Q Consensus 294 ~~v~~fitHgG~~------s~~eal~~GvP~i~~P 322 (408)
-+.++.++|.|-| ++.+|...++|+|++-
T Consensus 75 g~~gv~~~t~GPG~~N~l~gl~~A~~~~~Pvl~I~ 109 (585)
T CHL00099 75 GKVGVCFATSGPGATNLVTGIATAQMDSVPLLVIT 109 (585)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3456689998844 8899999999999995
No 212
>PRK13840 sucrose phosphorylase; Provisional
Probab=34.39 E-value=1.9e+02 Score=29.80 Aligned_cols=130 Identities=16% Similarity=0.294 Sum_probs=78.0
Q ss_pred hhhhhhhccCCCCceEEEe----cC-----C-----cccCCHHHHHHHHHHHHhCCCCEEEEEecCCcc--cccccchhh
Q 045998 208 IEIHQWLNKKPPSSVIYIS----FG-----S-----LLVLSQNQIDSIAAALINTKRPFLWVIRSQENK--EGGVLRAGF 271 (408)
Q Consensus 208 ~~l~~~l~~~~~~~vvyvs----~G-----S-----~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~--~~~~lp~~~ 271 (408)
..|.+||...|.+.+-|+. .| . ..-++++..+.+.+.+.+.+..+.+........ ....+..++
T Consensus 270 ~~L~~~l~~~p~~~~n~L~~HDgIgl~d~~~~~~~~~gll~~~e~~~l~~~~~~~~~~~~~~~~~~~as~~~~Y~in~~~ 349 (495)
T PRK13840 270 EALAHWLEIRPRNAVTVLDTHDGIGIIDVGADDRGLAGLLPDEQIDNLVETIHANSHGESRQATGAAASNLDLYQVNCTY 349 (495)
T ss_pred hHHHHHHHhCCCccEEeeecCCCCCcccccccccccccCCCHHHHHHHHHHHHHhccCceeecCCcccccccchhhhccH
Confidence 3456788887655433332 11 1 124678889999999999888888876654321 011222333
Q ss_pred hhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCC
Q 045998 272 LEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGT 351 (408)
Q Consensus 272 ~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 351 (408)
...+.++- +.-+|+|+=. -..-|||+|=..-.--+.-.-..+++ .|.|+.+.+ ..
T Consensus 350 ~~Al~~~d-------~r~lla~ai~--------------~~~~GiP~iY~~~ll~~~ND~~~~~~-t~~~R~inR---~~ 404 (495)
T PRK13840 350 YDALGRND-------QDYLAARAIQ--------------FFAPGIPQVYYVGLLAGPNDMELLAR-TNVGRDINR---HY 404 (495)
T ss_pred HHHhcCCc-------HHHHHHHHHH--------------HcCCCcceeeechhhccCccHHHHHh-cCCCcccCC---CC
Confidence 33332221 3444545433 23458888876543334334455666 799999998 89
Q ss_pred cCHHHHHHHHH
Q 045998 352 LSIQQVQRCID 362 (408)
Q Consensus 352 ~~~~~l~~~i~ 362 (408)
++.+++.+.+.
T Consensus 405 ~~~~~~~~~l~ 415 (495)
T PRK13840 405 YSTAEIDEALE 415 (495)
T ss_pred CCHHHHHHHHH
Confidence 99999988863
No 213
>PRK12342 hypothetical protein; Provisional
Probab=34.33 E-value=91 Score=28.95 Aligned_cols=39 Identities=8% Similarity=-0.054 Sum_probs=27.9
Q ss_pred HHHHHHHHhhcCCCCccEEEECCCC------CcHHHHHHHcCCCeEEEec
Q 045998 47 NLSSIINNLSNNDKKKSCIITNPFM------PWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 47 ~l~~ll~~l~~~~~~~D~vI~D~~~------~~~~~vA~~lgIP~v~~~~ 90 (408)
.+...++++ .||+|++-... .-+..+|+.||+|++.+..
T Consensus 100 ~La~~i~~~-----~~DLVl~G~~s~D~~tgqvg~~lA~~Lg~P~vt~v~ 144 (254)
T PRK12342 100 ALAAAIEKI-----GFDLLLFGEGSGDLYAQQVGLLLGELLQLPVINAVS 144 (254)
T ss_pred HHHHHHHHh-----CCCEEEEcCCcccCCCCCHHHHHHHHhCCCcEeeEE
Confidence 445555543 59999985433 2489999999999998753
No 214
>PRK13010 purU formyltetrahydrofolate deformylase; Reviewed
Probab=34.30 E-value=3.6e+02 Score=25.50 Aligned_cols=115 Identities=14% Similarity=0.144 Sum_probs=70.3
Q ss_pred HHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCce
Q 045998 239 DSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPV 318 (408)
Q Consensus 239 ~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~ 318 (408)
.++++.|++.+..++...+... -|++.|.+..+.++. =-||++ .=...|.+....|+.+|+..
T Consensus 159 ~~~~~~l~~~~~Dlivlagym~-----il~~~~l~~~~~~ii----------NiHpSl--LP~f~G~~~~~~ai~~G~k~ 221 (289)
T PRK13010 159 AQILDLIETSGAELVVLARYMQ-----VLSDDLSRKLSGRAI----------NIHHSF--LPGFKGARPYHQAHARGVKL 221 (289)
T ss_pred HHHHHHHHHhCCCEEEEehhhh-----hCCHHHHhhccCCce----------eeCccc--CCCCCCCCHHHHHHHcCCCe
Confidence 3466777777777777776643 456666544433322 235555 55557899999999999999
Q ss_pred eeccCC--CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 045998 319 IAYPEW--TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWK 381 (408)
Q Consensus 319 i~~P~~--~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~ 381 (408)
.++-.+ .+..+...-+.. --+.+. ..-+.++|.+.+.++-. .-|-+..+.+.
T Consensus 222 tG~TvH~v~~~lD~GpII~Q---~~v~V~----~~dt~e~L~~r~~~~E~----~~l~~ai~~~~ 275 (289)
T PRK13010 222 IGATAHFVTDDLDEGPIIEQ---DVERVD----HSYSPEDLVAKGRDVEC----LTLARAVKAFI 275 (289)
T ss_pred EEEEEEEEcCCCCCCCceEE---EEEEcC----CCCCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 888754 244445544444 222333 34477888888877643 34555554443
No 215
>PRK08978 acetolactate synthase 2 catalytic subunit; Reviewed
Probab=34.03 E-value=1.3e+02 Score=31.10 Aligned_cols=28 Identities=21% Similarity=0.348 Sum_probs=23.1
Q ss_pred CcceEEeccCc------chHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGW------NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~------~s~~eal~~GvP~i~~P 322 (408)
+.+++++|.|- +++.||...++|+|++-
T Consensus 63 ~~gv~~~t~GpG~~n~~~~l~~A~~~~~Pvl~i~ 96 (548)
T PRK08978 63 KVGVCIATSGPGATNLITGLADALLDSVPVVAIT 96 (548)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 34559999884 47899999999999984
No 216
>PRK06270 homoserine dehydrogenase; Provisional
Probab=33.06 E-value=3.3e+02 Score=26.33 Aligned_cols=58 Identities=14% Similarity=0.105 Sum_probs=34.7
Q ss_pred cHHHHhcccCcceEEe------ccC---cchHHHHHHcCCceee---ccCCCChhhhHHhhhceeeeEEEe
Q 045998 286 SQEKVLMHAAVSCFLT------HCG---WNSTLETVAAGVPVIA---YPEWTDQPTDAKLLVDVFKIGVRM 344 (408)
Q Consensus 286 pq~~lL~h~~v~~fit------HgG---~~s~~eal~~GvP~i~---~P~~~DQ~~na~~v~~~~g~G~~l 344 (408)
.-.++|.++++..+|- |+| ..-+.+++.+|+++|+ -|+...-..-.+...+ .|+.+..
T Consensus 80 d~~ell~~~~~DvVvd~T~s~~~~~~~a~~~~~~aL~~GkhVVtaNK~pla~~~~eL~~~A~~-~g~~~~~ 149 (341)
T PRK06270 80 SGLEVIRSVDADVVVEATPTNIETGEPALSHCRKALERGKHVVTSNKGPLALAYKELKELAKK-NGVRFRY 149 (341)
T ss_pred CHHHHhhccCCCEEEECCcCcccccchHHHHHHHHHHCCCEEEcCCcHHHHhhHHHHHHHHHH-cCCEEEE
Confidence 4567776655544655 443 4456899999999999 4775432222223333 5665554
No 217
>PRK06048 acetolactate synthase 3 catalytic subunit; Reviewed
Probab=32.64 E-value=1.1e+02 Score=31.97 Aligned_cols=28 Identities=18% Similarity=0.316 Sum_probs=22.8
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
+.+++++|.| .+++.+|...++|+|++-
T Consensus 70 ~~~v~~~t~GpG~~n~~~gl~~A~~~~~Pvl~i~ 103 (561)
T PRK06048 70 KVGVCVATSGPGATNLVTGIATAYMDSVPIVALT 103 (561)
T ss_pred CCeEEEECCCCcHHHHHHHHHHHhhcCCCEEEEe
Confidence 3455899988 447899999999999984
No 218
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=32.61 E-value=2.1e+02 Score=27.30 Aligned_cols=103 Identities=16% Similarity=0.186 Sum_probs=65.0
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcce
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSC 298 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~ 298 (408)
.+.+-.|.||++. +++++-+...|.+++.. ...... . .. ...+.+..++|+.+++
T Consensus 145 gktvGIiG~G~IG-------~~vA~~~~~fgm~V~~~-d~~~~~------~-------~~--~~~~~~l~ell~~sDv-- 199 (311)
T PRK08410 145 GKKWGIIGLGTIG-------KRVAKIAQAFGAKVVYY-STSGKN------K-------NE--EYERVSLEELLKTSDI-- 199 (311)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhcCCEEEEE-CCCccc------c-------cc--CceeecHHHHhhcCCE--
Confidence 4568999999988 46666677788887653 221100 0 11 1235678899999998
Q ss_pred EEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeE-EEeecCCCCCcCHHHHHHHHHH
Q 045998 299 FLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIG-VRMRNEEDGTLSIQQVQRCIDE 363 (408)
Q Consensus 299 fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G-~~l~~~~~~~~~~~~l~~~i~~ 363 (408)
++-|+=.+.- .....|+..+.. ++=| +.++..+.+.++.+.|.++++.
T Consensus 200 v~lh~Plt~~----------------T~~li~~~~~~~-Mk~~a~lIN~aRG~vVDe~AL~~AL~~ 248 (311)
T PRK08410 200 ISIHAPLNEK----------------TKNLIAYKELKL-LKDGAILINVGRGGIVNEKDLAKALDE 248 (311)
T ss_pred EEEeCCCCch----------------hhcccCHHHHHh-CCCCeEEEECCCccccCHHHHHHHHHc
Confidence 8777633221 234567777776 5533 4445555677888888887764
No 219
>PRK06965 acetolactate synthase 3 catalytic subunit; Validated
Probab=32.27 E-value=1.3e+02 Score=31.53 Aligned_cols=29 Identities=14% Similarity=0.245 Sum_probs=23.3
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeeccC
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYPE 323 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P~ 323 (408)
+.+++++|.| .+++.+|...++|+|++.-
T Consensus 84 ~~gv~~~t~GpG~~N~l~gl~~A~~~~~Pvl~i~G 118 (587)
T PRK06965 84 KVGVALVTSGPGVTNAVTGIATAYMDSIPMVVISG 118 (587)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCCCEEEEec
Confidence 4555888888 4478899999999999963
No 220
>PRK14077 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=32.26 E-value=86 Score=29.69 Aligned_cols=57 Identities=9% Similarity=0.168 Sum_probs=38.3
Q ss_pred HHhcccCcceEEeccCcchHHHHHH----cCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHH
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVA----AGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~v 364 (408)
.+...+++ +|+-||=||++.+.. .++|++++-.. .+|-. ..++.+++.++++++
T Consensus 60 ~~~~~~Dl--vi~iGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL------t~~~~~~~~~~l~~i 117 (287)
T PRK14077 60 ELFKISDF--LISLGGDGTLISLCRKAAEYDKFVLGIHAG--------------HLGFL------TDITVDEAEKFFQAF 117 (287)
T ss_pred hcccCCCE--EEEECCCHHHHHHHHHhcCCCCcEEEEeCC--------------CcccC------CcCCHHHHHHHHHHH
Confidence 33445677 999999999998865 37788877321 02221 245667888888888
Q ss_pred hcC
Q 045998 365 TQG 367 (408)
Q Consensus 365 l~~ 367 (408)
+.+
T Consensus 118 ~~g 120 (287)
T PRK14077 118 FQG 120 (287)
T ss_pred HcC
Confidence 765
No 221
>PRK07574 formate dehydrogenase; Provisional
Probab=32.21 E-value=2.5e+02 Score=27.87 Aligned_cols=73 Identities=14% Similarity=0.129 Sum_probs=45.7
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceE
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCF 299 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~f 299 (408)
+.|-.|.+|++. +.+++-|...|.+++.. .... .+....+. .+ +.......++++.+++ +
T Consensus 193 ktVGIvG~G~IG-------~~vA~~l~~fG~~V~~~-dr~~------~~~~~~~~--~g--~~~~~~l~ell~~aDv--V 252 (385)
T PRK07574 193 MTVGIVGAGRIG-------LAVLRRLKPFDVKLHYT-DRHR------LPEEVEQE--LG--LTYHVSFDSLVSVCDV--V 252 (385)
T ss_pred CEEEEECCCHHH-------HHHHHHHHhCCCEEEEE-CCCC------CchhhHhh--cC--ceecCCHHHHhhcCCE--E
Confidence 458899999988 56777788888876543 2211 11111111 11 2223467789999999 9
Q ss_pred EeccCcchHHHHH
Q 045998 300 LTHCGWNSTLETV 312 (408)
Q Consensus 300 itHgG~~s~~eal 312 (408)
+.|+-.+.-.+.+
T Consensus 253 ~l~lPlt~~T~~l 265 (385)
T PRK07574 253 TIHCPLHPETEHL 265 (385)
T ss_pred EEcCCCCHHHHHH
Confidence 9999876655543
No 222
>COG0052 RpsB Ribosomal protein S2 [Translation, ribosomal structure and biogenesis]
Probab=31.91 E-value=99 Score=28.48 Aligned_cols=30 Identities=17% Similarity=0.118 Sum_probs=23.7
Q ss_pred CccEEE-ECCCC-CcHHHHHHHcCCCeEEEec
Q 045998 61 KKSCII-TNPFM-PWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 61 ~~D~vI-~D~~~-~~~~~vA~~lgIP~v~~~~ 90 (408)
-||+++ +|+-. --+..=|.++|||+|.+.-
T Consensus 156 ~Pd~l~ViDp~~e~iAv~EA~klgIPVvAlvD 187 (252)
T COG0052 156 LPDVLFVIDPRKEKIAVKEANKLGIPVVALVD 187 (252)
T ss_pred CCCEEEEeCCcHhHHHHHHHHHcCCCEEEEec
Confidence 489775 58766 5777889999999999853
No 223
>PRK14092 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase
Probab=31.17 E-value=1e+02 Score=26.54 Aligned_cols=31 Identities=26% Similarity=0.431 Sum_probs=23.4
Q ss_pred CCCceEEEecCCcccCCHHHHHHHHHHHHhC
Q 045998 218 PPSSVIYISFGSLLVLSQNQIDSIAAALINT 248 (408)
Q Consensus 218 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~ 248 (408)
+.+-.+|+++||......+.++..+..|.+.
T Consensus 5 ~~~~~v~i~LGSNlg~~~~~l~~A~~~L~~~ 35 (163)
T PRK14092 5 PASALAYVGLGANLGDAAATLRSVLAELAAA 35 (163)
T ss_pred CcCCEEEEEecCchHhHHHHHHHHHHHHHhC
Confidence 3445799999998865667777777878764
No 224
>COG0503 Apt Adenine/guanine phosphoribosyltransferases and related PRPP-binding proteins [Nucleotide transport and metabolism]
Probab=30.96 E-value=1.8e+02 Score=25.31 Aligned_cols=37 Identities=19% Similarity=0.299 Sum_probs=26.5
Q ss_pred HHHHHhhcCCCCccEEEE-CCC-CCcHHHHHHHcCCCeEEE
Q 045998 50 SIINNLSNNDKKKSCIIT-NPF-MPWVPDVAAEHKIPCAVL 88 (408)
Q Consensus 50 ~ll~~l~~~~~~~D~vI~-D~~-~~~~~~vA~~lgIP~v~~ 88 (408)
.+.+.+.. .++|.|+. +.- +..+..+|.++|+|.+..
T Consensus 44 ~~~~~~~~--~~id~Iv~iea~Gi~~a~~vA~~Lgvp~v~v 82 (179)
T COG0503 44 ELAERYKD--DGIDKIVTIEARGIPLAAAVALELGVPFVPV 82 (179)
T ss_pred HHHHHhcc--cCCCEEEEEccccchhHHHHHHHhCCCEEEE
Confidence 44444433 46899985 443 468999999999999875
No 225
>PRK01231 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=30.91 E-value=2.7e+02 Score=26.47 Aligned_cols=54 Identities=17% Similarity=0.208 Sum_probs=38.6
Q ss_pred cccCcceEEeccCcchHHHHHH----cCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 292 MHAAVSCFLTHCGWNSTLETVA----AGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 292 ~h~~v~~fitHgG~~s~~eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
..+++ +|+=||=||+++++. .++|++++... + +|.. ..++.+++.+++++++.+
T Consensus 61 ~~~d~--vi~~GGDGt~l~~~~~~~~~~~Pvlgin~G-----------~---lGFl------~~~~~~~~~~~l~~~~~g 118 (295)
T PRK01231 61 EVCDL--VIVVGGDGSLLGAARALARHNVPVLGINRG-----------R---LGFL------TDIRPDELEFKLAEVLDG 118 (295)
T ss_pred cCCCE--EEEEeCcHHHHHHHHHhcCCCCCEEEEeCC-----------c---cccc------ccCCHHHHHHHHHHHHcC
Confidence 34666 999999999999875 36788877431 1 2211 245678999999999875
No 226
>PRK03359 putative electron transfer flavoprotein FixA; Reviewed
Probab=30.37 E-value=1.1e+02 Score=28.39 Aligned_cols=40 Identities=13% Similarity=-0.108 Sum_probs=28.5
Q ss_pred HHHHHHHHHhhcCCCCccEEEECCCC------CcHHHHHHHcCCCeEEEec
Q 045998 46 KNLSSIINNLSNNDKKKSCIITNPFM------PWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 46 ~~l~~ll~~l~~~~~~~D~vI~D~~~------~~~~~vA~~lgIP~v~~~~ 90 (408)
..+...++++ .||+|++-... .-+..+|+.||+|++.+.+
T Consensus 102 ~~La~ai~~~-----~~DLVl~G~~s~D~~tgqvg~~lAe~Lg~P~vt~v~ 147 (256)
T PRK03359 102 SALAAAAQKA-----GFDLILCGDGSSDLYAQQVGLLVGEILNIPAINGVS 147 (256)
T ss_pred HHHHHHHHHh-----CCCEEEEcCccccCCCCcHHHHHHHHhCCCceeeEE
Confidence 3455555553 59999984432 3678899999999998754
No 227
>PRK12311 rpsB 30S ribosomal protein S2/unknown domain fusion protein; Provisional
Probab=30.29 E-value=1.2e+02 Score=29.29 Aligned_cols=31 Identities=13% Similarity=0.006 Sum_probs=24.3
Q ss_pred CCccEEE-ECCCC-CcHHHHHHHcCCCeEEEec
Q 045998 60 KKKSCII-TNPFM-PWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 60 ~~~D~vI-~D~~~-~~~~~vA~~lgIP~v~~~~ 90 (408)
..||+|| +|+.. ..+..=|.++|||+|.+.-
T Consensus 151 ~~Pd~viv~d~~~e~~AI~EA~kl~IPvIaivD 183 (326)
T PRK12311 151 GLPDLLFVIDTNKEDIAIQEAQRLGIPVAAIVD 183 (326)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEee
Confidence 3689776 47765 5778889999999999853
No 228
>PRK07789 acetolactate synthase 1 catalytic subunit; Validated
Probab=29.95 E-value=2.4e+02 Score=29.78 Aligned_cols=28 Identities=21% Similarity=0.311 Sum_probs=23.0
Q ss_pred CcceEEeccCcc------hHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGWN------STLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~~------s~~eal~~GvP~i~~P 322 (408)
+.+++++|.|-| ++.+|-..++|||++-
T Consensus 94 ~~gv~~~t~GPG~~N~l~gl~~A~~~~~PllvI~ 127 (612)
T PRK07789 94 RVGVCMATSGPGATNLVTPIADANMDSVPVVAIT 127 (612)
T ss_pred CCEEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 455588998844 7889999999999985
No 229
>COG3660 Predicted nucleoside-diphosphate-sugar epimerase [Cell envelope biogenesis, outer membrane]
Probab=29.68 E-value=4.8e+02 Score=24.55 Aligned_cols=95 Identities=17% Similarity=0.246 Sum_probs=56.9
Q ss_pred eEEEecCCcc--cCCHHHHHH----HHHHHHhCCCCEEEEEecCCcccccccchhhhhhcC-CCeEE-----EecccHHH
Q 045998 222 VIYISFGSLL--VLSQNQIDS----IAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETK-DRGLV-----VKWCSQEK 289 (408)
Q Consensus 222 vvyvs~GS~~--~~~~~~~~~----~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~-~n~~v-----~~w~pq~~ 289 (408)
|.++--|+.. ...+++... +.+.+++.|.+|+.+....... .+-.-+..++. .-+.+ .++=|..+
T Consensus 164 vAVlVGg~nk~f~~~~d~a~q~~~~l~k~l~~~g~~~lisfSRRTp~---~~~s~l~~~l~s~~~i~w~~~d~g~NPY~~ 240 (329)
T COG3660 164 VAVLVGGNNKAFVFQEDKAHQFASLLVKILENQGGSFLISFSRRTPD---TVKSILKNNLNSSPGIVWNNEDTGYNPYID 240 (329)
T ss_pred EEEEecCCCCCCccCHHHHHHHHHHHHHHHHhCCceEEEEeecCCcH---HHHHHHHhccccCceeEeCCCCCCCCchHH
Confidence 5555556655 344555444 4455667888999987654221 11111111121 12222 24568999
Q ss_pred HhcccCcceEEecc-CcchHHHHHHcCCceeec
Q 045998 290 VLMHAAVSCFLTHC-GWNSTLETVAAGVPVIAY 321 (408)
Q Consensus 290 lL~h~~v~~fitHg-G~~s~~eal~~GvP~i~~ 321 (408)
+|+.++. +|.-. ..|...||.+.|+|+-+.
T Consensus 241 ~La~Ady--ii~TaDSinM~sEAasTgkPv~~~ 271 (329)
T COG3660 241 MLAAADY--IISTADSINMCSEAASTGKPVFIL 271 (329)
T ss_pred HHhhcce--EEEecchhhhhHHHhccCCCeEEE
Confidence 9999997 66554 477789999999998764
No 230
>PF07131 DUF1382: Protein of unknown function (DUF1382); InterPro: IPR009814 This entry is represented by Bacteriophage lambda, Xis. This entry overlaps with IPR009750, both representing lambda Xis. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches. This family consists of several hypothetical Escherichia coli and Bacteriophage lambda-like proteins of around 60 residues in length. The function of this family is unknown.
Probab=29.26 E-value=27 Score=24.27 Aligned_cols=11 Identities=27% Similarity=0.543 Sum_probs=9.4
Q ss_pred CCCCeEEEEcC
Q 045998 10 TESTVQFVFFP 20 (408)
Q Consensus 10 ~~~gi~f~~i~ 20 (408)
...||+|+|+|
T Consensus 20 a~~GIRFVpiP 30 (61)
T PF07131_consen 20 AHIGIRFVPIP 30 (61)
T ss_pred HHcCceeeccc
Confidence 34799999999
No 231
>PRK08266 hypothetical protein; Provisional
Probab=29.21 E-value=3.2e+02 Score=28.25 Aligned_cols=28 Identities=14% Similarity=0.113 Sum_probs=22.9
Q ss_pred CcceEEeccCc------chHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGW------NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~------~s~~eal~~GvP~i~~P 322 (408)
+.+++++|.|- +++.+|-..++|+|++-
T Consensus 68 ~~~v~~~t~GpG~~N~~~gi~~A~~~~~Pvl~i~ 101 (542)
T PRK08266 68 RPGVCSVVPGPGVLNAGAALLTAYGCNSPVLCLT 101 (542)
T ss_pred CCeEEEECCCCcHHHHHHHHHHHHhhCCCEEEEe
Confidence 34558899884 48899999999999984
No 232
>PF10093 DUF2331: Uncharacterized protein conserved in bacteria (DUF2331); InterPro: IPR016633 This entry describes a conserved hypothetical protein that typically is encoded next to the gene efp for translation elongation factor P. The function is unknown.
Probab=29.17 E-value=1.7e+02 Score=28.91 Aligned_cols=85 Identities=15% Similarity=0.168 Sum_probs=53.8
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEecCCcc-cc-cccc-----hhhhhhcCCCeEE--EecccHH---HHhcccCcceEEe
Q 045998 234 SQNQIDSIAAALINTKRPFLWVIRSQENK-EG-GVLR-----AGFLEETKDRGLV--VKWCSQE---KVLMHAAVSCFLT 301 (408)
Q Consensus 234 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~-~~-~~lp-----~~~~~~~~~n~~v--~~w~pq~---~lL~h~~v~~fit 301 (408)
+...+..+++++++.+.++...+..+... .. ..++ .+- ....+++.+ .+++||. .+|-.+++ -+-
T Consensus 193 e~~~l~~ll~~~~~~~~pv~llvp~g~~~~~~~~~~~~~~~~~g~-~~~~g~l~l~~lPF~~Q~~yD~LLw~cD~--NfV 269 (374)
T PF10093_consen 193 ENAALASLLDAWAASPKPVHLLVPEGRALNSLAAWLGDALLQAGD-SWQRGNLTLHVLPFVPQDDYDRLLWACDF--NFV 269 (374)
T ss_pred CchHHHHHHHHHhcCCCCeEEEecCCccHHHHHHHhccccccCcc-ccccCCeEEEECCCCCHHHHHHHHHhCcc--ceE
Confidence 45557888888888888777665543211 00 0010 000 011355544 4999998 58999987 444
Q ss_pred ccCcchHHHHHHcCCceeecc
Q 045998 302 HCGWNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 302 HgG~~s~~eal~~GvP~i~~P 322 (408)
. |--|..-|..+|+|+|=-.
T Consensus 270 R-GEDSfVRAqwAgkPFvWhI 289 (374)
T PF10093_consen 270 R-GEDSFVRAQWAGKPFVWHI 289 (374)
T ss_pred e-cchHHHHHHHhCCCceEec
Confidence 4 5679999999999998543
No 233
>PRK07979 acetolactate synthase 3 catalytic subunit; Validated
Probab=28.95 E-value=1.7e+02 Score=30.61 Aligned_cols=29 Identities=14% Similarity=0.274 Sum_probs=23.6
Q ss_pred cCcceEEeccCcc------hHHHHHHcCCceeecc
Q 045998 294 AAVSCFLTHCGWN------STLETVAAGVPVIAYP 322 (408)
Q Consensus 294 ~~v~~fitHgG~~------s~~eal~~GvP~i~~P 322 (408)
-+.+++++|.|-| ++.+|...++|+|++-
T Consensus 66 g~~gv~~~t~GPG~~n~l~gi~~A~~~~~Pvl~i~ 100 (574)
T PRK07979 66 GEVGVVLVTSGPGATNAITGIATAYMDSIPLVVLS 100 (574)
T ss_pred CCceEEEECCCccHhhhHHHHHHHhhcCCCEEEEE
Confidence 3456699998844 6789999999999984
No 234
>PF08766 DEK_C: DEK C terminal domain; InterPro: IPR014876 DEK is a chromatin associated protein that is linked with cancers and autoimmune disease. This domain is found at the C-terminal of DEK and is of clinical importance since it can reverse the characteristic abnormal DNA-mutagen sensitivity in fibroblasts from ataxia-telangiectasia (A-T) patients []. The structure of this domain shows it to be homologous to the E2F/DP transcription factor family []. This domain is also found in chitin synthase proteins like Q8TF96 from SWISSPROT, and in protein phosphatases such as Q6NN85 from SWISSPROT. ; PDB: 1Q1V_A.
Probab=28.84 E-value=1.7e+02 Score=19.69 Aligned_cols=48 Identities=15% Similarity=0.263 Sum_probs=24.6
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 045998 353 SIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEI 405 (408)
Q Consensus 353 ~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 405 (408)
+.++|+.+|+++|.+.+-.. -..+.+++.+.+.. |-+-..-+.+|+++
T Consensus 1 td~~i~~~i~~iL~~~dl~~--vT~k~vr~~Le~~~---~~dL~~~K~~I~~~ 48 (54)
T PF08766_consen 1 TDEEIREAIREILREADLDT--VTKKQVREQLEERF---GVDLSSRKKFIKEL 48 (54)
T ss_dssp -HHHHHHHHHHHHTTS-GGG----HHHHHHHHHHH----SS--SHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCHhH--hhHHHHHHHHHHHH---CCCcHHHHHHHHHH
Confidence 45789999999997642222 23455555555544 44433445555544
No 235
>PRK05858 hypothetical protein; Provisional
Probab=27.86 E-value=2.5e+02 Score=29.15 Aligned_cols=28 Identities=7% Similarity=0.102 Sum_probs=22.5
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
+.++.++|.| .+++.+|-..++|+|++.
T Consensus 67 ~~gv~~~t~GpG~~n~~~~i~~A~~~~~Pvl~i~ 100 (542)
T PRK05858 67 VPGVAVLTAGPGVTNGMSAMAAAQFNQSPLVVLG 100 (542)
T ss_pred CCeEEEEcCCchHHHHHHHHHHHHhcCCCEEEEe
Confidence 3445888887 458899999999999975
No 236
>PLN02929 NADH kinase
Probab=27.55 E-value=94 Score=29.64 Aligned_cols=97 Identities=12% Similarity=0.183 Sum_probs=60.3
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHH
Q 045998 234 SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVA 313 (408)
Q Consensus 234 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~ 313 (408)
.++.++.+.+.|.+.+..+.-+.+. .+ ......+++ +|+-||=||++.+..
T Consensus 32 h~~~~~~~~~~L~~~gi~~~~v~r~-------~~--------------------~~~~~~~Dl--vi~lGGDGT~L~aa~ 82 (301)
T PLN02929 32 HKDTVNFCKDILQQKSVDWECVLRN-------EL--------------------SQPIRDVDL--VVAVGGDGTLLQASH 82 (301)
T ss_pred hHHHHHHHHHHHHHcCCEEEEeecc-------cc--------------------ccccCCCCE--EEEECCcHHHHHHHH
Confidence 5666777888888888765222111 11 011245566 999999999999854
Q ss_pred ---cCCceeeccCCC------ChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 314 ---AGVPVIAYPEWT------DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 314 ---~GvP~i~~P~~~------DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
.++|++++-... .++.|.-- +. ...|... .++.+++.+++++++.+
T Consensus 83 ~~~~~iPvlGIN~Gp~~~~~~~~~~~~~~-~~-r~lGfL~------~~~~~~~~~~L~~il~g 137 (301)
T PLN02929 83 FLDDSIPVLGVNSDPTQKDEVEEYSDEFD-AR-RSTGHLC------AATAEDFEQVLDDVLFG 137 (301)
T ss_pred HcCCCCcEEEEECCCcccccccccccccc-cc-cCccccc------cCCHHHHHHHHHHHHcC
Confidence 478999886532 12333211 11 2355443 35678999999999976
No 237
>PRK06725 acetolactate synthase 3 catalytic subunit; Validated
Probab=27.55 E-value=1.7e+02 Score=30.58 Aligned_cols=28 Identities=11% Similarity=0.269 Sum_probs=22.8
Q ss_pred CcceEEeccCcc------hHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGWN------STLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~~------s~~eal~~GvP~i~~P 322 (408)
+.+++++|.|-| ++.+|...++|||++-
T Consensus 77 ~~gv~~~t~GpG~~N~~~gla~A~~~~~Pvl~I~ 110 (570)
T PRK06725 77 KVGVVFATSGPGATNLVTGLADAYMDSIPLVVIT 110 (570)
T ss_pred CCeEEEECCCccHHHHHHHHHHHhhcCcCEEEEe
Confidence 456688998854 6789999999999984
No 238
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=27.24 E-value=1.5e+02 Score=24.97 Aligned_cols=43 Identities=14% Similarity=0.124 Sum_probs=30.0
Q ss_pred HHHHHHHhhcCCCCccEEEECCC--------C-CcHHHHHHHcCCCeEEEecchh
Q 045998 48 LSSIINNLSNNDKKKSCIITNPF--------M-PWVPDVAAEHKIPCAVLWIQAC 93 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~--------~-~~~~~vA~~lgIP~v~~~~~~~ 93 (408)
+.+.++++. +.+|+||+|.. . ....++++.++.|.+.+.....
T Consensus 89 i~~~~~~l~---~~~D~viid~~g~~~~~~~~~~~~~dl~~~~~~~vilV~~~~~ 140 (166)
T TIGR00347 89 LSKHLRTLE---QKYDFVLVEGAGGLCVPITEEYTTADLIKLLQLPVILVVRVKL 140 (166)
T ss_pred HHHHHHHHH---hcCCEEEEEcCCccccCCCCCCcHHHHHHHhCCCEEEEECCCC
Confidence 445555554 46899998874 1 2567789999999888765433
No 239
>PRK13011 formyltetrahydrofolate deformylase; Reviewed
Probab=27.19 E-value=5.4e+02 Score=24.29 Aligned_cols=114 Identities=11% Similarity=0.113 Sum_probs=68.5
Q ss_pred HHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCcee
Q 045998 240 SIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVI 319 (408)
Q Consensus 240 ~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i 319 (408)
.+++.|++.+..+++..+... -||+.+.+..+.++. =-||++ .=.+.|.+.+..|+.+|+...
T Consensus 156 ~~~~~l~~~~~Dlivlagy~~-----il~~~~l~~~~~~ii----------NiHpSL--LP~~rG~~~~~~ai~~G~~~t 218 (286)
T PRK13011 156 QVLDVVEESGAELVVLARYMQ-----VLSPELCRKLAGRAI----------NIHHSF--LPGFKGAKPYHQAYERGVKLI 218 (286)
T ss_pred HHHHHHHHhCcCEEEEeChhh-----hCCHHHHhhccCCeE----------Eecccc--CCCCCCCcHHHHHHHCCCCeE
Confidence 456666666677777666542 456666554433322 235555 556678999999999999998
Q ss_pred eccCCC--ChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 045998 320 AYPEWT--DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWK 381 (408)
Q Consensus 320 ~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~ 381 (408)
++-++. +..+-..-+.. .-+.+. ..-|.++|.+.+.++-. .-|-+..+.+.
T Consensus 219 G~TvH~v~~~~D~G~Ii~Q---~~v~I~----~~dt~~~L~~r~~~~E~----~~~~~ai~~~~ 271 (286)
T PRK13011 219 GATAHYVTDDLDEGPIIEQ---DVERVD----HAYSPEDLVAKGRDVEC----LTLARAVKAHI 271 (286)
T ss_pred EEEEEEEcCCCcCCCcEEE---EEEEcC----CCCCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 876542 33333333333 223333 34588899988877533 34555555444
No 240
>cd01018 ZntC Metal binding protein ZntC. These proteins are predicted to function as initial receptors in ABC transport of metal ions. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. They are comprised of two globular subdomains connected by a long alpha helix and bind their specific ligands in the cleft between these domains. In addition, many of these proteins possess a metal-binding histidine-rich motif (repetitive HDH sequence).
Probab=27.18 E-value=2.1e+02 Score=26.50 Aligned_cols=45 Identities=16% Similarity=0.144 Sum_probs=33.8
Q ss_pred HHHHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHcCCCeEEEecch
Q 045998 46 KNLSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEHKIPCAVLWIQA 92 (408)
Q Consensus 46 ~~l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~lgIP~v~~~~~~ 92 (408)
..+.++.+.+++ .+..||+++.... .+-.+|+..|++.+.+-+..
T Consensus 204 ~~l~~l~~~ik~--~~v~~if~e~~~~~~~~~~la~~~g~~v~~ld~~~ 250 (266)
T cd01018 204 ADLKRLIDLAKE--KGVRVVFVQPQFSTKSAEAIAREIGAKVVTIDPLA 250 (266)
T ss_pred HHHHHHHHHHHH--cCCCEEEEcCCCCcHHHHHHHHHcCCeEEEeCCcH
Confidence 355666666665 5789999998773 66789999999988775544
No 241
>COG3340 PepE Peptidase E [Amino acid transport and metabolism]
Probab=26.95 E-value=4.8e+02 Score=23.62 Aligned_cols=45 Identities=16% Similarity=0.129 Sum_probs=35.2
Q ss_pred hhhhhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEE
Q 045998 209 EIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLW 254 (408)
Q Consensus 209 ~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw 254 (408)
-+.+|+... .++|.||=+-|...-.....++..++|++.|+.+.=
T Consensus 23 ~i~n~l~g~-~~~i~FIPtAs~~~~~~~Yv~k~~~~l~~lg~~v~~ 67 (224)
T COG3340 23 FIANFLQGK-RKTIAFIPTASVDSEDDFYVEKVRNALAKLGLEVSE 67 (224)
T ss_pred HHHHHhcCC-CceEEEEecCccccchHHHHHHHHHHHHHcCCeeee
Confidence 344666654 567999999888877778899999999999987654
No 242
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=26.67 E-value=2.8e+02 Score=26.76 Aligned_cols=105 Identities=16% Similarity=0.267 Sum_probs=70.5
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceE
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCF 299 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~f 299 (408)
+.+=.+.+|.+. ++++.-++..|.+++.--+... |+ . +.-.-..|++..++|+.+++ +
T Consensus 147 ktvGIiG~GrIG-------~avA~r~~~Fgm~v~y~~~~~~-------~~-~-----~~~~~~~y~~l~ell~~sDi--i 204 (324)
T COG1052 147 KTLGIIGLGRIG-------QAVARRLKGFGMKVLYYDRSPN-------PE-A-----EKELGARYVDLDELLAESDI--I 204 (324)
T ss_pred CEEEEECCCHHH-------HHHHHHHhcCCCEEEEECCCCC-------hH-H-----HhhcCceeccHHHHHHhCCE--E
Confidence 457778888887 4667777778888776433221 11 0 11111566778999999999 8
Q ss_pred EeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeee-EEEeecCCCCCcCHHHHHHHHHH
Q 045998 300 LTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKI-GVRMRNEEDGTLSIQQVQRCIDE 363 (408)
Q Consensus 300 itHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~~~~~l~~~i~~ 363 (408)
+-||..+-- .....|++.++. ++- ++.++..+...++++.+.+++++
T Consensus 205 ~l~~Plt~~----------------T~hLin~~~l~~-mk~ga~lVNtaRG~~VDe~ALi~AL~~ 252 (324)
T COG1052 205 SLHCPLTPE----------------TRHLINAEELAK-MKPGAILVNTARGGLVDEQALIDALKS 252 (324)
T ss_pred EEeCCCChH----------------HhhhcCHHHHHh-CCCCeEEEECCCccccCHHHHHHHHHh
Confidence 888865432 234568888888 665 44556666788899999998875
No 243
>TIGR03646 YtoQ_fam YtoQ family protein. Members of this family are uncharacterized proteins, including YtoQ from Bacillus subtilis. This family shows some sequence similarity to a family of nucleoside 2-deoxyribosyltransferases (COG3613 as iterated through CDD), but sufficiently remote that PSI-BLAST starting from YtoQ and exploring outwards does not discover the relationship.
Probab=26.60 E-value=3.7e+02 Score=22.25 Aligned_cols=34 Identities=29% Similarity=0.621 Sum_probs=24.9
Q ss_pred cHHHHhcccCcceEEeccC-----cchHHHH---HHcCCceeec
Q 045998 286 SQEKVLMHAAVSCFLTHCG-----WNSTLET---VAAGVPVIAY 321 (408)
Q Consensus 286 pq~~lL~h~~v~~fitHgG-----~~s~~ea---l~~GvP~i~~ 321 (408)
--..++..+++ +|-.-| ||+.+.| .+.|+|+|++
T Consensus 68 RT~~li~~aDv--vVvrFGekYKQWNaAfDAg~aaAlgKplI~l 109 (144)
T TIGR03646 68 RTRKLIEKADV--VIALFGEKYKQWNAAFDAGYAAALGKPLIIL 109 (144)
T ss_pred HHHHHHhhCCE--EEEEechHHHHHHHHhhHHHHHHcCCCeEEe
Confidence 34566788888 887777 8877765 5668888776
No 244
>PRK07449 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase; Validated
Probab=26.43 E-value=1.5e+02 Score=30.84 Aligned_cols=84 Identities=12% Similarity=0.103 Sum_probs=46.7
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecc-cHHH-------HhcccCcceEEeccC--
Q 045998 235 QNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC-SQEK-------VLMHAAVSCFLTHCG-- 304 (408)
Q Consensus 235 ~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~-pq~~-------lL~h~~v~~fitHgG-- 304 (408)
....+.+++.|++.|.+.++-+-+.... .+-+.+. ..+++..+... .+.+ -......+++++|.|
T Consensus 9 ~~~a~~l~~~L~~~GV~~vFgvpG~~~~---~l~~~l~--~~~~i~~v~~~hE~~A~~aAdgyar~tg~~~v~~vt~GpG 83 (568)
T PRK07449 9 TLWAAVILEELTRLGVRHVVIAPGSRST---PLTLAAA--EHPRLRLHTHFDERSAGFLALGLAKASKRPVAVIVTSGTA 83 (568)
T ss_pred HHHHHHHHHHHHHcCCCEEEECCCCccH---HHHHHHH--hCCCcEEEeecCcccHHHHHHHHHHhhCCCEEEEECCccH
Confidence 4445678888888888877765543221 1112221 11233333211 1111 111223344888888
Q ss_pred ----cchHHHHHHcCCceeeccC
Q 045998 305 ----WNSTLETVAAGVPVIAYPE 323 (408)
Q Consensus 305 ----~~s~~eal~~GvP~i~~P~ 323 (408)
.+++.||-..++|||++.-
T Consensus 84 ~~N~l~~i~~A~~~~~Pvl~IsG 106 (568)
T PRK07449 84 VANLYPAVIEAGLTGVPLIVLTA 106 (568)
T ss_pred HHhhhHHHHHHhhcCCcEEEEEC
Confidence 4588999999999999953
No 245
>TIGR03457 sulphoacet_xsc sulfoacetaldehyde acetyltransferase. Members of this protein family are sulfoacetaldehyde acetyltransferase, an enzyme of taurine utilization. Taurine, or 2-aminoethanesulfonate, can be used by bacteria as a source of carbon, nitrogen, and sulfur.
Probab=26.42 E-value=2.5e+02 Score=29.35 Aligned_cols=29 Identities=17% Similarity=0.169 Sum_probs=23.5
Q ss_pred cCcceEEeccCcc------hHHHHHHcCCceeecc
Q 045998 294 AAVSCFLTHCGWN------STLETVAAGVPVIAYP 322 (408)
Q Consensus 294 ~~v~~fitHgG~~------s~~eal~~GvP~i~~P 322 (408)
-+.+++++|.|-| ++.+|...++|+|++.
T Consensus 63 g~~gv~~~t~GPG~~N~~~gla~A~~~~~Pvl~I~ 97 (579)
T TIGR03457 63 GRMSMVIGQNGPGVTNCVTAIAAAYWAHTPVVIVT 97 (579)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHhhcCCCEEEEe
Confidence 3455599998844 7789999999999995
No 246
>cd03416 CbiX_SirB_N Sirohydrochlorin cobalt chelatase (CbiX) and sirohydrochlorin iron chelatase (SirB), N-terminal domain. SirB catalyzes the ferro-chelation of sirohydrochlorin to siroheme, the prosthetic group of sulfite and nitrite reductases. CbiX is a cobaltochelatase, responsible for the chelation of Co2+ into sirohydrochlorin, an important step in the vitamin B12 biosynthetic pathway. CbiX often contains a C-terminal histidine-rich region that may be important for metal delivery and/or storage, and may also contain an iron-sulfur center. Both are found in a wide range of bacteria. This subgroup also contains single domain proteins from archaea and bacteria which may represent the ancestral form of class II chelatases before domain duplication occurred.
Probab=26.23 E-value=2e+02 Score=21.97 Aligned_cols=36 Identities=11% Similarity=0.174 Sum_probs=25.1
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhC--CCCEEEEE
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINT--KRPFLWVI 256 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~--~~~~iw~~ 256 (408)
++|+++.||........+..+++.+++. ...+-+.+
T Consensus 1 ~ivlv~hGS~~~~~~~~~~~l~~~l~~~~~~~~v~~af 38 (101)
T cd03416 1 ALLLVGHGSRDPRAAEALEALAERLRERLPGDEVELAF 38 (101)
T ss_pred CEEEEEcCCCCHHHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 3789999998754556788888888764 34555443
No 247
>PRK01911 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=26.14 E-value=1.2e+02 Score=28.67 Aligned_cols=57 Identities=21% Similarity=0.338 Sum_probs=40.2
Q ss_pred HHhcccCcceEEeccCcchHHHHHHc----CCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHH
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVAA----GVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~~----GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~v 364 (408)
.+...+++ +|+=||=||++.+... ++|++++-+. .+|.. ..++.+++.++++++
T Consensus 60 ~~~~~~dl--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G--------------~lGFL------t~~~~~~~~~~l~~i 117 (292)
T PRK01911 60 ELDGSADM--VISIGGDGTFLRTATYVGNSNIPILGINTG--------------RLGFL------ATVSKEEIEETIDEL 117 (292)
T ss_pred hcccCCCE--EEEECCcHHHHHHHHHhcCCCCCEEEEecC--------------CCCcc------cccCHHHHHHHHHHH
Confidence 33445677 9999999999998773 7888887321 02222 345678888899888
Q ss_pred hcC
Q 045998 365 TQG 367 (408)
Q Consensus 365 l~~ 367 (408)
+.+
T Consensus 118 ~~g 120 (292)
T PRK01911 118 LNG 120 (292)
T ss_pred HcC
Confidence 876
No 248
>PRK07524 hypothetical protein; Provisional
Probab=26.12 E-value=2.5e+02 Score=29.02 Aligned_cols=28 Identities=11% Similarity=0.156 Sum_probs=22.3
Q ss_pred CcceEEeccCc------chHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGW------NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~------~s~~eal~~GvP~i~~P 322 (408)
+.++++.|.|- +++.+|...++|+|++-
T Consensus 64 ~~gv~~~t~GpG~~n~~~gi~~A~~~~~Pvl~i~ 97 (535)
T PRK07524 64 KPGVCFIITGPGMTNIATAMGQAYADSIPMLVIS 97 (535)
T ss_pred CCeEEEECCCccHHHHHHHHHHHHhcCCCEEEEe
Confidence 34558888884 47899999999999883
No 249
>PRK02649 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=25.68 E-value=1.2e+02 Score=29.10 Aligned_cols=55 Identities=16% Similarity=0.264 Sum_probs=38.5
Q ss_pred hcccCcceEEeccCcchHHHHHHc----CCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 291 LMHAAVSCFLTHCGWNSTLETVAA----GVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 291 L~h~~v~~fitHgG~~s~~eal~~----GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
...+++ +|+=||=||++.+... ++|++++-+. .+|.. ..+..+++.+++++++.
T Consensus 66 ~~~~Dl--vi~iGGDGTlL~aar~~~~~~iPilGIN~G--------------~lGFL------t~~~~~~~~~~l~~l~~ 123 (305)
T PRK02649 66 DSSMKF--AIVLGGDGTVLSAARQLAPCGIPLLTINTG--------------HLGFL------TEAYLNQLDEAIDQVLA 123 (305)
T ss_pred ccCcCE--EEEEeCcHHHHHHHHHhcCCCCcEEEEeCC--------------CCccc------ccCCHHHHHHHHHHHHc
Confidence 344666 9999999999999774 7898887320 12211 24466888888888886
Q ss_pred C
Q 045998 367 G 367 (408)
Q Consensus 367 ~ 367 (408)
+
T Consensus 124 g 124 (305)
T PRK02649 124 G 124 (305)
T ss_pred C
Confidence 5
No 250
>PRK08617 acetolactate synthase; Reviewed
Probab=25.23 E-value=2.5e+02 Score=29.07 Aligned_cols=29 Identities=24% Similarity=0.306 Sum_probs=23.1
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeeccC
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYPE 323 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P~ 323 (408)
+.+++++|.| .+++.+|...++|+|++--
T Consensus 67 ~~gv~~vt~GpG~~N~l~gl~~A~~~~~PvlvisG 101 (552)
T PRK08617 67 KPGVVLVTSGPGVSNLATGLVTATAEGDPVVAIGG 101 (552)
T ss_pred CCEEEEECCCCcHhHhHHHHHHHhhcCCCEEEEec
Confidence 3455888888 4478999999999999853
No 251
>PRK04940 hypothetical protein; Provisional
Probab=25.13 E-value=1.6e+02 Score=25.77 Aligned_cols=30 Identities=10% Similarity=0.063 Sum_probs=23.8
Q ss_pred CccEEEECCCC-CcHHHHHHHcCCCeEEEec
Q 045998 61 KKSCIITNPFM-PWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 61 ~~D~vI~D~~~-~~~~~vA~~lgIP~v~~~~ 90 (408)
++.+||--.+- +|+.-+|+++|+|+|.+.+
T Consensus 60 ~~~~liGSSLGGyyA~~La~~~g~~aVLiNP 90 (180)
T PRK04940 60 ERPLICGVGLGGYWAERIGFLCGIRQVIFNP 90 (180)
T ss_pred CCcEEEEeChHHHHHHHHHHHHCCCEEEECC
Confidence 34677766665 7999999999999999854
No 252
>PLN02928 oxidoreductase family protein
Probab=24.98 E-value=3.2e+02 Score=26.60 Aligned_cols=116 Identities=14% Similarity=0.157 Sum_probs=61.5
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCccccc--ccchhhhhhcCCCeEEEecccHHHHhcccCc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGG--VLRAGFLEETKDRGLVVKWCSQEKVLMHAAV 296 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~--~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v 296 (408)
.+.+..|.+|.+. +.+++.+...|.+++..-+........ .+|.......... ...+....++|+.+++
T Consensus 159 gktvGIiG~G~IG-------~~vA~~l~afG~~V~~~dr~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~L~ell~~aDi 229 (347)
T PLN02928 159 GKTVFILGYGAIG-------IELAKRLRPFGVKLLATRRSWTSEPEDGLLIPNGDVDDLVDE--KGGHEDIYEFAGEADI 229 (347)
T ss_pred CCEEEEECCCHHH-------HHHHHHHhhCCCEEEEECCCCChhhhhhhccccccccccccc--cCcccCHHHHHhhCCE
Confidence 3468899999988 577778888898876542211100000 0000000000000 1145667789999999
Q ss_pred ceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeee-EEEeecCCCCCcCHHHHHHHHH
Q 045998 297 SCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKI-GVRMRNEEDGTLSIQQVQRCID 362 (408)
Q Consensus 297 ~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~-G~~l~~~~~~~~~~~~l~~~i~ 362 (408)
++.|+-.+.-.. ...|+..+.. ++= ++.++..+...++.+.|.++++
T Consensus 230 --Vvl~lPlt~~T~----------------~li~~~~l~~-Mk~ga~lINvaRG~lVde~AL~~AL~ 277 (347)
T PLN02928 230 --VVLCCTLTKETA----------------GIVNDEFLSS-MKKGALLVNIARGGLLDYDAVLAALE 277 (347)
T ss_pred --EEECCCCChHhh----------------cccCHHHHhc-CCCCeEEEECCCccccCHHHHHHHHH
Confidence 999987554322 2334444444 332 3333444445666666666665
No 253
>PF03693 RHH_2: Uncharacterised protein family (UPF0156); InterPro: IPR022789 This family of proteins are about 80 amino acids in length and their function is unknown. The proteins contain a conserved GRY motif. This family appears to be related to ribbon-helix-helix DNA-binding proteins. ; PDB: 3KXE_C.
Probab=24.81 E-value=1.3e+02 Score=22.41 Aligned_cols=50 Identities=20% Similarity=0.311 Sum_probs=30.0
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhC
Q 045998 353 SIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEITRK 408 (408)
Q Consensus 353 ~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 408 (408)
..+-|+++++. +.. -..+.+.|++.+.+....|.+...+++.|+...+++
T Consensus 29 ~SEvvR~aLRl-le~-----~e~~~~~Lr~~l~~g~~sG~~~~~~~~~~~~~~~~~ 78 (80)
T PF03693_consen 29 ASEVVREALRL-LEE-----REAKLEALREALQEGLESGESEPFDMDDILARARRK 78 (80)
T ss_dssp HHHHHHHHHHH-HHH-----HHHHHHHHHHHHHHHHCT-EESS--HHHHHHHCCH-
T ss_pred HHHHHHHHHHH-HHH-----HHHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHhh
Confidence 44667777764 432 123456688888877766666668888888876553
No 254
>COG0299 PurN Folate-dependent phosphoribosylglycinamide formyltransferase PurN [Nucleotide transport and metabolism]
Probab=24.55 E-value=1.6e+02 Score=26.10 Aligned_cols=41 Identities=24% Similarity=0.392 Sum_probs=30.7
Q ss_pred HHHHHHHhhcCC--CCccEEEECCCCCcHHHHHHHcCCCeEEE
Q 045998 48 LSSIINNLSNND--KKKSCIITNPFMPWVPDVAAEHKIPCAVL 88 (408)
Q Consensus 48 l~~ll~~l~~~~--~~~D~vI~D~~~~~~~~vA~~lgIP~v~~ 88 (408)
|+.+++.+.... -...+||+|--...+..-|++.|||+..+
T Consensus 14 lqaiida~~~~~~~a~i~~Visd~~~A~~lerA~~~gIpt~~~ 56 (200)
T COG0299 14 LQAIIDAIKGGKLDAEIVAVISDKADAYALERAAKAGIPTVVL 56 (200)
T ss_pred HHHHHHHHhcCCCCcEEEEEEeCCCCCHHHHHHHHcCCCEEEe
Confidence 455666554211 24789999988888999999999999776
No 255
>TIGR00655 PurU formyltetrahydrofolate deformylase. This model describes formyltetrahydrofolate deformylases. The enzyme is a homohexamer. Sequences from a related enzyme formyl tetrahydrofolate-specific enzyme, phosphoribosylglycinamide formyltransferase, serve as an outgroup for phylogenetic analysis. Putative members of this family, scoring below the trusted cutoff, include a sequence from Rhodobacter capsulatus that lacks an otherwise conserved C-terminal region.
Probab=24.54 E-value=6e+02 Score=23.91 Aligned_cols=115 Identities=12% Similarity=0.172 Sum_probs=67.9
Q ss_pred HHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCce
Q 045998 239 DSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPV 318 (408)
Q Consensus 239 ~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~ 318 (408)
.++++.|++.+..++...+... -|++.+.+..+.++.- -||++ .=...|.+.+..|+..|+..
T Consensus 150 ~~~~~~l~~~~~Dlivlagym~-----il~~~~l~~~~~~iIN----------iHpSL--LP~f~G~~p~~~ai~~G~k~ 212 (280)
T TIGR00655 150 KRQLELLKQYQVDLVVLAKYMQ-----ILSPDFVKRYPNKIIN----------IHHSF--LPAFIGANPYQRAYERGVKI 212 (280)
T ss_pred HHHHHHHHHhCCCEEEEeCchh-----hCCHHHHhhccCCEEE----------ecCCc--CCCCCCcCHHHHHHHcCCCe
Confidence 3466666666677777666542 4556665544433222 24444 44456888999999999999
Q ss_pred eeccCC--CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 045998 319 IAYPEW--TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWK 381 (408)
Q Consensus 319 i~~P~~--~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~ 381 (408)
.++-.+ .+..+...-+.+ . -+.+. ..-|.++|.+.+.++-. .-|-+..+.+.
T Consensus 213 tG~TvH~V~e~lD~GpII~Q-~--~v~I~----~~dt~~~L~~ri~~~E~----~~~~~ai~~~~ 266 (280)
T TIGR00655 213 IGATAHYVTEELDEGPIIEQ-D--VVRVD----HTDNVEDLIRAGRDIEK----VVLARAVKLHL 266 (280)
T ss_pred EEEEEEEEcCCCcCCCeEEE-E--EEEcC----CCCCHHHHHHHHHHHHH----HHHHHHHHHHH
Confidence 887653 344445554443 2 22332 45588888888866532 34555554443
No 256
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=24.25 E-value=37 Score=31.96 Aligned_cols=39 Identities=21% Similarity=0.329 Sum_probs=31.8
Q ss_pred ccCcchHH--HHHHcCCceeeccCCCChhhhHHh-hhceeeeE
Q 045998 302 HCGWNSTL--ETVAAGVPVIAYPEWTDQPTDAKL-LVDVFKIG 341 (408)
Q Consensus 302 HgG~~s~~--eal~~GvP~i~~P~~~DQ~~na~~-v~~~~g~G 341 (408)
=||||+++ -|-.+||-++++-+...|..+++. +.+ .|+-
T Consensus 80 GCGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~-~gl~ 121 (283)
T COG2230 80 GCGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAA-RGLE 121 (283)
T ss_pred CCChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHH-cCCC
Confidence 37888764 456669999999999999999976 565 8888
No 257
>PRK07586 hypothetical protein; Validated
Probab=24.23 E-value=2e+02 Score=29.52 Aligned_cols=29 Identities=17% Similarity=0.170 Sum_probs=21.5
Q ss_pred CcceEEeccCcc------hHHHHHHcCCceeeccC
Q 045998 295 AVSCFLTHCGWN------STLETVAAGVPVIAYPE 323 (408)
Q Consensus 295 ~v~~fitHgG~~------s~~eal~~GvP~i~~P~ 323 (408)
+.++.++|.|-| ++.+|...++|+|++.-
T Consensus 64 ~~gv~~~t~GPG~~N~~~gl~~A~~~~~Pvl~i~G 98 (514)
T PRK07586 64 KPAATLLHLGPGLANGLANLHNARRARTPIVNIVG 98 (514)
T ss_pred CCEEEEecccHHHHHHHHHHHHHHhcCCCEEEEec
Confidence 344578887744 45589999999999853
No 258
>TIGR01012 Sa_S2_E_A ribosomal protein Sa(cytosolic)/S2(archaeal). TIGR01011 describes the related protein of organelles and bacteria.
Probab=24.08 E-value=1.1e+02 Score=27.30 Aligned_cols=30 Identities=23% Similarity=0.245 Sum_probs=23.6
Q ss_pred CccEEE-ECCCC-CcHHHHHHHcCCCeEEEec
Q 045998 61 KKSCII-TNPFM-PWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 61 ~~D~vI-~D~~~-~~~~~vA~~lgIP~v~~~~ 90 (408)
.||+|| .|+.. .-+..-|.++|||.+.+.-
T Consensus 108 ~Pdlliv~dp~~~~~Av~EA~~l~IP~Iai~D 139 (196)
T TIGR01012 108 EPEVVVVTDPRADHQALKEASEVGIPIVALCD 139 (196)
T ss_pred CCCEEEEECCccccHHHHHHHHcCCCEEEEee
Confidence 478776 58766 5778889999999999853
No 259
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=23.99 E-value=5.1e+02 Score=22.97 Aligned_cols=46 Identities=13% Similarity=0.035 Sum_probs=32.1
Q ss_pred hhhhhhhccC--CCCceEEEecCCcccCCHHHHHHHHHHHHhC-CCCEEEE
Q 045998 208 IEIHQWLNKK--PPSSVIYISFGSLLVLSQNQIDSIAAALINT-KRPFLWV 255 (408)
Q Consensus 208 ~~l~~~l~~~--~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~-~~~~iw~ 255 (408)
+.|.+++... ....++||...|. ...+....+.++|.+. ++.+.-.
T Consensus 18 ~~l~~~l~~~~~~~~~i~~IptAs~--~~~~~~~~~~~a~~~l~G~~~~~~ 66 (212)
T cd03146 18 PAIDDLLLSLTKARPKVLFVPTASG--DRDEYTARFYAAFESLRGVEVSHL 66 (212)
T ss_pred HHHHHHHHHhccCCCeEEEECCCCC--CHHHHHHHHHHHHhhccCcEEEEE
Confidence 3444666654 3456999987776 4567788899999998 8766543
No 260
>PRK14075 pnk inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.95 E-value=4.5e+02 Score=24.30 Aligned_cols=53 Identities=13% Similarity=0.402 Sum_probs=36.3
Q ss_pred ccCcceEEeccCcchHHHHHH-cCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 293 HAAVSCFLTHCGWNSTLETVA-AGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 293 h~~v~~fitHgG~~s~~eal~-~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++++ +|+=||=||++.|+. .++|++++-.. .+|.. ..++.+++.+++++++.+
T Consensus 41 ~~d~--vi~iGGDGT~L~a~~~~~~Pilgin~G--------------~lGfl------~~~~~~~~~~~l~~~~~g 94 (256)
T PRK14075 41 TADL--IIVVGGDGTVLKAAKKVGTPLVGFKAG--------------RLGFL------SSYTLEEIDRFLEDLKNW 94 (256)
T ss_pred CCCE--EEEECCcHHHHHHHHHcCCCEEEEeCC--------------CCccc------cccCHHHHHHHHHHHHcC
Confidence 4566 999999999999876 47777776311 02222 245667888888888765
No 261
>TIGR01504 glyox_carbo_lig glyoxylate carboligase. Glyoxylate carboligase, also called tartronate-semialdehyde synthase, releases CO2 while synthesizing a single molecule of tartronate semialdehyde from two molecules of glyoxylate. It is a thiamine pyrophosphate-dependent enzyme, closely related in sequence to the large subunit of acetolactate synthase. In the D-glycerate pathway, part of allantoin degradation in the Enterobacteriaceae, tartronate semialdehyde is converted to D-glycerate and then 3-phosphoglycerate, a product of glycolysis and entry point in the general metabolism.
Probab=23.95 E-value=3.7e+02 Score=28.20 Aligned_cols=28 Identities=11% Similarity=0.324 Sum_probs=22.1
Q ss_pred CcceEEeccC------cchHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCG------WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG------~~s~~eal~~GvP~i~~P 322 (408)
.+++.++|.| .+.+.+|-..++|||++-
T Consensus 67 ~~gv~~~t~GpG~~N~~~gla~A~~~~~Pvl~I~ 100 (588)
T TIGR01504 67 NIGVCIGTSGPAGTDMITGLYSASADSIPILCIT 100 (588)
T ss_pred CeEEEEECCCccHHHHHHHHHHHhhcCCCEEEEe
Confidence 3555777766 568899999999999984
No 262
>cd03409 Chelatase_Class_II Class II Chelatase: a family of ATP-independent monomeric or homodimeric enzymes that catalyze the insertion of metal into protoporphyrin rings. This family includes protoporphyrin IX ferrochelatase (HemH), sirohydrochlorin ferrochelatase (SirB) and the cobaltochelatases, CbiK and CbiX. HemH and SirB are involved in heme and siroheme biosynthesis, respectively, while the cobaltochelatases are associated with cobalamin biosynthesis. Excluded from this family are the ATP-dependent heterotrimeric chelatases (class I) and the multifunctional homodimeric enzymes with dehydrogenase and chelatase activities (class III).
Probab=23.91 E-value=3e+02 Score=20.68 Aligned_cols=37 Identities=19% Similarity=0.292 Sum_probs=25.8
Q ss_pred eEEEecCCccc-CCHHHHHHHHHHHHhC--CCCEEEEEec
Q 045998 222 VIYISFGSLLV-LSQNQIDSIAAALINT--KRPFLWVIRS 258 (408)
Q Consensus 222 vvyvs~GS~~~-~~~~~~~~~~~al~~~--~~~~iw~~~~ 258 (408)
+|+++.||... .....+..+++.+++. ...+.+.+..
T Consensus 2 lllv~HGs~~~s~~~~~~~~~~~~l~~~~~~~~v~~a~~~ 41 (101)
T cd03409 2 LLVVGHGSPYKDPYKKDIEAQAHNLAESLPDFPYYVGFQS 41 (101)
T ss_pred EEEEECCCCCCccHHHHHHHHHHHHHHHCCCCCEEEEEEC
Confidence 78999999875 4556788888888763 3455555544
No 263
>KOG1111 consensus N-acetylglucosaminyltransferase complex, subunit PIG-A/SPT14, required for phosphatidylinositol biosynthesis/Sulfolipid synthase [Cell wall/membrane/envelope biogenesis; Posttranslational modification, protein turnover, chaperones; Lipid transport and metabolism]
Probab=23.88 E-value=7.1e+02 Score=24.58 Aligned_cols=82 Identities=18% Similarity=0.329 Sum_probs=51.8
Q ss_pred CHHHHHHHHHHHHh--CCCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccHH---HHhcccCcceEEeccC--
Q 045998 234 SQNQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQE---KVLMHAAVSCFLTHCG-- 304 (408)
Q Consensus 234 ~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq~---~lL~h~~v~~fitHgG-- 304 (408)
.-+.+-+++..+-+ ...+|+.. |++.... .+ ++.+|+ +.+++.+.+-+|+. ++|...++ |++-.=
T Consensus 209 GiDll~~iIp~vc~~~p~vrfii~-GDGPk~i--~l-ee~lEk~~l~~rV~~lG~v~h~~Vr~vl~~G~I--FlntSlTE 282 (426)
T KOG1111|consen 209 GIDLLLEIIPSVCDKHPEVRFIII-GDGPKRI--DL-EEMLEKLFLQDRVVMLGTVPHDRVRDVLVRGDI--FLNTSLTE 282 (426)
T ss_pred chHHHHHHHHHHHhcCCCeeEEEe-cCCcccc--hH-HHHHHHhhccCceEEecccchHHHHHHHhcCcE--EeccHHHH
Confidence 34555555555544 45666654 3332110 22 344444 46888889999887 57888888 886543
Q ss_pred --cchHHHHHHcCCceeec
Q 045998 305 --WNSTLETVAAGVPVIAY 321 (408)
Q Consensus 305 --~~s~~eal~~GvP~i~~ 321 (408)
--.+.||..+|.|+|.-
T Consensus 283 afc~~ivEAaScGL~VVsT 301 (426)
T KOG1111|consen 283 AFCMVIVEAASCGLPVVST 301 (426)
T ss_pred HHHHHHHHHHhCCCEEEEe
Confidence 23678999999999865
No 264
>TIGR03609 S_layer_CsaB polysaccharide pyruvyl transferase CsaB. The CsaB protein (cell surface anchoring B) of Bacillus anthracis adds a pyruvoyl group to peptidoglycan-associated polysaccharide. This addition is required for proteins with an S-layer homology domain (pfam00395) to bind. Within the larger group of proteins described by Pfam model pfam04230, this model represents a distinct clade that nearly exactly follows the phylogenetic distribution of the S-layer homology domain (pfam00395).
Probab=23.82 E-value=4.3e+02 Score=24.62 Aligned_cols=98 Identities=19% Similarity=0.196 Sum_probs=51.0
Q ss_pred CceEEEecCCcccCCHHHHHHHHHH---HH-hCCCCEEEEEecCCcccccccchhhhhhcCCCeEEE-ecccHH--HHhc
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAA---LI-NTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVV-KWCSQE--KVLM 292 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~a---l~-~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~-~w~pq~--~lL~ 292 (408)
++.|.|++-.-.....+..+.++++ +. +.+.++++.--....+ ...-+.+.+.++++..+. ..-|++ .+++
T Consensus 172 ~~~i~i~~r~~~~~~~~~~~~l~~~l~~l~~~~g~~v~~i~~~~~~D--~~~~~~l~~~~~~~~~i~~~~~~~e~~~~i~ 249 (298)
T TIGR03609 172 EPVIVVSLRPWPLLDVSRLLRLLRALDRLQRDTGAFVLFLPFQQPQD--LPLARALRDQLLGPAEVLSPLDPEELLGLFA 249 (298)
T ss_pred CCeEEEEECCCCcCCHHHHHHHHHHHHHHHHhhCCeEEEEeCCcchh--HHHHHHHHHhcCCCcEEEecCCHHHHHHHHh
Confidence 4567777654322344444444443 33 3488887754321111 011123333333333333 233433 5688
Q ss_pred ccCcceEEeccCcchHHHHHHcCCceeecc
Q 045998 293 HAAVSCFLTHCGWNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 293 h~~v~~fitHgG~~s~~eal~~GvP~i~~P 322 (408)
++++ +|+.==+ ++.-|+.+|||.+++.
T Consensus 250 ~~~~--vI~~RlH-~~I~A~~~gvP~i~i~ 276 (298)
T TIGR03609 250 SARL--VIGMRLH-ALILAAAAGVPFVALS 276 (298)
T ss_pred hCCE--EEEechH-HHHHHHHcCCCEEEee
Confidence 8887 8874333 4556788999999884
No 265
>cd01141 TroA_d Periplasmic binding protein TroA_d. These proteins are predicted to function as initial receptors in the ABC metal ion uptake in eubacteria and archaea. They belong to the TroA superfamily of helical backbone metal receptor proteins that share a distinct fold and ligand binding mechanism. A typical TroA protein is comprised of two globular subdomains connected by a single helix and can bind their ligands in the cleft between these domains.
Probab=23.80 E-value=1.3e+02 Score=25.77 Aligned_cols=28 Identities=18% Similarity=0.125 Sum_probs=19.8
Q ss_pred CccEEEECCCCC-c-HHHHHHHcCCCeEEE
Q 045998 61 KKSCIITNPFMP-W-VPDVAAEHKIPCAVL 88 (408)
Q Consensus 61 ~~D~vI~D~~~~-~-~~~vA~~lgIP~v~~ 88 (408)
+||+||...... . ....-++.|||++.+
T Consensus 69 ~PDlii~~~~~~~~~~~~~l~~~gIpvv~i 98 (186)
T cd01141 69 KPDLVILYGGFQAQTILDKLEQLGIPVLYV 98 (186)
T ss_pred CCCEEEEecCCCchhHHHHHHHcCCCEEEe
Confidence 799999865432 2 445557889998776
No 266
>PF06506 PrpR_N: Propionate catabolism activator; InterPro: IPR010524 Two-component signal transduction systems enable bacteria to sense, respond, and adapt to a wide range of environments, stressors, and growth conditions []. Some bacteria can contain up to as many as 200 two-component systems that need tight regulation to prevent unwanted cross-talk []. These pathways have been adapted to response to a wide variety of stimuli, including nutrients, cellular redox state, changes in osmolarity, quorum signals, antibiotics, and more []. Two-component systems are comprised of a sensor histidine kinase (HK) and its cognate response regulator (RR) []. The HK catalyses its own auto-phosphorylation followed by the transfer of the phosphoryl group to the receiver domain on RR; phosphorylation of the RR usually activates an attached output domain, which can then effect changes in cellular physiology, often by regulating gene expression. Some HK are bifunctional, catalysing both the phosphorylation and dephosphorylation of their cognate RR. The input stimuli can regulate either the kinase or phosphatase activity of the bifunctional HK. A variant of the two-component system is the phospho-relay system. Here a hybrid HK auto-phosphorylates and then transfers the phosphoryl group to an internal receiver domain, rather than to a separate RR protein. The phosphoryl group is then shuttled to histidine phosphotransferase (HPT) and subsequently to a terminal RR, which can evoke the desired response [, ]. This entry represents a domain found at the N terminus of several sigma54- dependent transcriptional activators including PrpR, which activates catabolism of propionate. In Salmonella enterica subsp. enterica serovar Typhimurium, PrpR acts as a sensor of 2-methylcitrate (2-MC), an intermediate of the 2-methylcitric acid cycle used by this bacterium to convert propionate to pyruvate []. ; GO: 0000156 two-component response regulator activity, 0003677 DNA binding, 0005524 ATP binding, 0000160 two-component signal transduction system (phosphorelay); PDB: 2Q5C_A 2PJU_A.
Probab=23.76 E-value=1.1e+02 Score=26.48 Aligned_cols=43 Identities=12% Similarity=0.146 Sum_probs=30.2
Q ss_pred hHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEecch
Q 045998 45 SKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWIQA 92 (408)
Q Consensus 45 ~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~ 92 (408)
...++..+.++.+ .++|+||-+. ....+|+++|+|++.+.+..
T Consensus 111 ~~e~~~~i~~~~~--~G~~viVGg~---~~~~~A~~~gl~~v~i~sg~ 153 (176)
T PF06506_consen 111 EEEIEAAIKQAKA--EGVDVIVGGG---VVCRLARKLGLPGVLIESGE 153 (176)
T ss_dssp HHHHHHHHHHHHH--TT--EEEESH---HHHHHHHHTTSEEEESS--H
T ss_pred HHHHHHHHHHHHH--cCCcEEECCH---HHHHHHHHcCCcEEEEEecH
Confidence 3456777778776 4699999875 35899999999998886643
No 267
>PRK04539 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=23.68 E-value=1.5e+02 Score=28.22 Aligned_cols=57 Identities=12% Similarity=0.140 Sum_probs=40.1
Q ss_pred HHhcccCcceEEeccCcchHHHHHH----cCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHH
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVA----AGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~v 364 (408)
.+...+++ +|+=||=||++.+.. .++|++++-.. + +|... .++.+++.++++++
T Consensus 64 ~~~~~~D~--vi~lGGDGT~L~aa~~~~~~~~PilGIN~G-----------~---lGFL~------~~~~~~~~~~l~~i 121 (296)
T PRK04539 64 ELGQYCDL--VAVLGGDGTFLSVAREIAPRAVPIIGINQG-----------H---LGFLT------QIPREYMTDKLLPV 121 (296)
T ss_pred hcCcCCCE--EEEECCcHHHHHHHHHhcccCCCEEEEecC-----------C---CeEee------ccCHHHHHHHHHHH
Confidence 33345677 999999999999964 37898888321 1 33222 35678888888888
Q ss_pred hcC
Q 045998 365 TQG 367 (408)
Q Consensus 365 l~~ 367 (408)
+.+
T Consensus 122 ~~g 124 (296)
T PRK04539 122 LEG 124 (296)
T ss_pred HcC
Confidence 875
No 268
>TIGR02302 aProt_lowcomp conserved hypothetical protein TIGR02302. Members of this family are long (~850 residue) bacterial proteins from the alpha Proteobacteria. Each has 2-3 predicted transmembrane helices near the N-terminus and a long C-terminal region that includes stretches of Gln/Gly-rich low complexity sequence, predicted by TMHMM to be outside the membrane. In Bradyrhizobium japonicum, two tandem reading frames are together homologous the single members found in other species; the cutoffs scores are set low enough that the longer scores above the trusted cutoff and the shorter above the noise cutoff for this model.
Probab=23.65 E-value=2.9e+02 Score=30.49 Aligned_cols=41 Identities=27% Similarity=0.422 Sum_probs=32.3
Q ss_pred cCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 366 QGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 366 ~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
++.+-.+-.++.++.++.+++|++. |.|+..|++|.++|++
T Consensus 494 EdG~ls~A~~~Lr~AQ~aL~eAL~~-gAsdeEI~~Lm~eLR~ 534 (851)
T TIGR02302 494 EDGDLSDAERRLRAAQDALKDALER-GASDEEIKQLTDKLRA 534 (851)
T ss_pred hcCCHHHHHHHHHHHHHHHHHHHHc-CCCHHHHHHHHHHHHH
Confidence 4444456788888889999999876 5677799999999864
No 269
>COG0297 GlgA Glycogen synthase [Carbohydrate transport and metabolism]
Probab=23.36 E-value=8.2e+02 Score=25.12 Aligned_cols=158 Identities=16% Similarity=0.170 Sum_probs=91.7
Q ss_pred eEEEecCCcc-c-CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchh---hhhhcCCCeEEEecccHH---HHhcc
Q 045998 222 VIYISFGSLL-V-LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAG---FLEETKDRGLVVKWCSQE---KVLMH 293 (408)
Q Consensus 222 vvyvs~GS~~-~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~---~~~~~~~n~~v~~w~pq~---~lL~h 293 (408)
.-|+.+-|.. . -..+.+.+.+.-+-+.+.+++. +|..+. .+-.. +.++.++++.+.-|.... .+++-
T Consensus 294 ~pl~~~vsRl~~QKG~dl~~~~i~~~l~~~~~~vi-lG~gd~----~le~~~~~la~~~~~~~~~~i~~~~~la~~i~ag 368 (487)
T COG0297 294 GPLFGFVSRLTAQKGLDLLLEAIDELLEQGWQLVL-LGTGDP----ELEEALRALASRHPGRVLVVIGYDEPLAHLIYAG 368 (487)
T ss_pred CcEEEEeeccccccchhHHHHHHHHHHHhCceEEE-EecCcH----HHHHHHHHHHHhcCceEEEEeeecHHHHHHHHhc
Confidence 3455544433 2 2335555555555555555444 344322 22222 233456777777665433 45666
Q ss_pred cCcceEEe-----ccCcchHHHHHHcCCceeeccCCC------ChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHH
Q 045998 294 AAVSCFLT-----HCGWNSTLETVAAGVPVIAYPEWT------DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCID 362 (408)
Q Consensus 294 ~~v~~fit-----HgG~~s~~eal~~GvP~i~~P~~~------DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~ 362 (408)
+++ |+- -||. |=++|+.+|.+-|+.+..+ |-..++ ... -|.|..... . +++++..+++
T Consensus 369 aD~--~lmPSrfEPcGL-~ql~amryGtvpIv~~tGGLadTV~~~~~~~--~~~-~gtGf~f~~----~-~~~~l~~al~ 437 (487)
T COG0297 369 ADV--ILMPSRFEPCGL-TQLYAMRYGTLPIVRETGGLADTVVDRNEWL--IQG-VGTGFLFLQ----T-NPDHLANALR 437 (487)
T ss_pred CCE--EEeCCcCcCCcH-HHHHHHHcCCcceEcccCCccceecCccchh--ccC-ceeEEEEec----C-CHHHHHHHHH
Confidence 666 654 4666 4578999999888888754 333333 344 688888863 3 9999999999
Q ss_pred HHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHH
Q 045998 363 EATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINR 400 (408)
Q Consensus 363 ~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~ 400 (408)
+.+. -|+.+-..++...+.+++..=|-+....+
T Consensus 438 rA~~-----~y~~~~~~w~~~~~~~m~~d~sw~~sa~~ 470 (487)
T COG0297 438 RALV-----LYRAPPLLWRKVQPNAMGADFSWDLSAKE 470 (487)
T ss_pred HHHH-----HhhCCHHHHHHHHHhhcccccCchhHHHH
Confidence 7763 46665555666666766533333333333
No 270
>PRK09107 acetolactate synthase 3 catalytic subunit; Validated
Probab=23.29 E-value=2.1e+02 Score=30.13 Aligned_cols=30 Identities=10% Similarity=0.266 Sum_probs=23.9
Q ss_pred cCcceEEeccC------cchHHHHHHcCCceeeccC
Q 045998 294 AAVSCFLTHCG------WNSTLETVAAGVPVIAYPE 323 (408)
Q Consensus 294 ~~v~~fitHgG------~~s~~eal~~GvP~i~~P~ 323 (408)
-+.+++++|.| .+.+.+|...++|||++--
T Consensus 73 g~~gv~~~t~GPG~~N~l~gia~A~~~~~Pvl~i~G 108 (595)
T PRK09107 73 GKPGVVLVTSGPGATNAVTPLQDALMDSIPLVCITG 108 (595)
T ss_pred CCCEEEEECCCccHhHHHHHHHHHhhcCCCEEEEEc
Confidence 34566999988 4478999999999999853
No 271
>PRK03378 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=22.91 E-value=1.4e+02 Score=28.42 Aligned_cols=56 Identities=14% Similarity=0.194 Sum_probs=39.2
Q ss_pred HHhcccCcceEEeccCcchHHHHHH----cCCceeeccCCCChhhhHHhhhceee-eEEEeecCCCCCcCHHHHHHHHHH
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVA----AGVPVIAYPEWTDQPTDAKLLVDVFK-IGVRMRNEEDGTLSIQQVQRCIDE 363 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~----~GvP~i~~P~~~DQ~~na~~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~~ 363 (408)
.+...+++ +|+=||=||++.+.. .++|++++-. | +|.. ..++.+++.+++++
T Consensus 59 ~~~~~~d~--vi~lGGDGT~L~aa~~~~~~~~Pilgin~---------------G~lGFl------~~~~~~~~~~~l~~ 115 (292)
T PRK03378 59 EIGQQADL--AIVVGGDGNMLGAARVLARYDIKVIGINR---------------GNLGFL------TDLDPDNALQQLSD 115 (292)
T ss_pred hcCCCCCE--EEEECCcHHHHHHHHHhcCCCCeEEEEEC---------------CCCCcc------cccCHHHHHHHHHH
Confidence 33445666 999999999999975 3678877732 2 1322 23457888999999
Q ss_pred HhcC
Q 045998 364 ATQG 367 (408)
Q Consensus 364 vl~~ 367 (408)
++++
T Consensus 116 i~~g 119 (292)
T PRK03378 116 VLEG 119 (292)
T ss_pred HHcC
Confidence 8875
No 272
>PRK15438 erythronate-4-phosphate dehydrogenase PdxB; Provisional
Probab=22.83 E-value=4.3e+02 Score=26.10 Aligned_cols=61 Identities=13% Similarity=0.121 Sum_probs=37.9
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcce
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSC 298 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~ 298 (408)
.+.+-.|.+|.+. ..+++-+...|.+++.. ... .. + .+. ...+.+..++|+.+++
T Consensus 116 gktvGIIG~G~IG-------~~vA~~l~a~G~~V~~~-dp~-~~------~------~~~--~~~~~~L~ell~~sDi-- 170 (378)
T PRK15438 116 DRTVGIVGVGNVG-------RRLQARLEALGIKTLLC-DPP-RA------D------RGD--EGDFRSLDELVQEADI-- 170 (378)
T ss_pred CCEEEEECcCHHH-------HHHHHHHHHCCCEEEEE-CCc-cc------c------ccc--ccccCCHHHHHhhCCE--
Confidence 3467888998888 46777777788887642 111 00 0 010 1245678888888888
Q ss_pred EEeccC
Q 045998 299 FLTHCG 304 (408)
Q Consensus 299 fitHgG 304 (408)
++-|+-
T Consensus 171 I~lh~P 176 (378)
T PRK15438 171 LTFHTP 176 (378)
T ss_pred EEEeCC
Confidence 776654
No 273
>PF02016 Peptidase_S66: LD-carboxypeptidase; InterPro: IPR003507 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This signature is found in the Escherichia coli microcin C7 self-immunity protein mccF and in muramoyltetrapeptide carboxypeptidase (3.4.17.13 from EC, LD-carboxypeptidase A). LD-carboxypeptidase A belongs to MEROPS peptidase family S66 (clan SS). The entry also contains uncharacterised proteins including hypothetical proteins from various bacteria archaea.; PDB: 1ZRS_A 1ZL0_B 2AUM_B 2AUN_B 3TLG_A 3TLC_A 3TLZ_B 3TLY_B 3TLE_A 3TLB_B ....
Probab=22.78 E-value=68 Score=30.25 Aligned_cols=73 Identities=10% Similarity=0.232 Sum_probs=44.1
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHH
Q 045998 233 LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETV 312 (408)
Q Consensus 233 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal 312 (408)
.+++..+.+.+++++...+.||.++.+... .++.++++...+-.||+. ||=..-..+++-++
T Consensus 46 s~~~Ra~dL~~a~~d~~i~aI~~~rGGyg~----------------~rlL~~ld~~~i~~~pK~--~iGySDiTaL~~al 107 (284)
T PF02016_consen 46 SDEERAEDLNEAFADPEIDAIWCARGGYGA----------------NRLLPYLDYDAIRKNPKI--FIGYSDITALHNAL 107 (284)
T ss_dssp -HHHHHHHHHHHHHSTTEEEEEES--SS-G----------------GGGGGGCHHHHHHHSG-E--EEE-GGGHHHHHHH
T ss_pred CHHHHHHHHHHHhcCCCCCEEEEeeccccH----------------HHHHhcccccccccCCCE--EEEecchHHHHHHH
Confidence 356778899999999999999988765321 113345555666666666 77666666666665
Q ss_pred Hc--CCceeeccC
Q 045998 313 AA--GVPVIAYPE 323 (408)
Q Consensus 313 ~~--GvP~i~~P~ 323 (408)
+. |.+.+--|.
T Consensus 108 ~~~~g~~t~hGp~ 120 (284)
T PF02016_consen 108 YAKTGLVTFHGPM 120 (284)
T ss_dssp HHHHTBEEEES--
T ss_pred HHhCCCeEEEcch
Confidence 43 566555565
No 274
>COG1327 Predicted transcriptional regulator, consists of a Zn-ribbon and ATP-cone domains [Transcription]
Probab=22.58 E-value=1.2e+02 Score=25.52 Aligned_cols=58 Identities=12% Similarity=0.111 Sum_probs=48.4
Q ss_pred cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHh
Q 045998 303 CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 303 gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl 365 (408)
|+--||.|-+.---|+|+-.-..-+++|...+.. |+-..+.+ ..++.+.|..++..+-
T Consensus 35 ~~RFTTfE~~El~~~~VvKkdg~Re~F~r~Kl~~--gl~~A~~K---RpVs~e~ie~~v~~ie 92 (156)
T COG1327 35 GERFTTFERAELRPLIVVKKDGRREPFDREKLRR--GLIRACEK---RPVSSEQIEEAVSHIE 92 (156)
T ss_pred ccccchhheeeeccceEECcCCCcCCCCHHHHHH--HHHHHHhc---CCCCHHHHHHHHHHHH
Confidence 3455889988888888988888889999998885 88877877 8999999999987764
No 275
>COG1691 NCAIR mutase (PurE)-related proteins [General function prediction only]
Probab=22.57 E-value=3.3e+02 Score=24.82 Aligned_cols=82 Identities=23% Similarity=0.253 Sum_probs=53.7
Q ss_pred ceE-EEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEeccc--HHHHhcccCcc
Q 045998 221 SVI-YISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCS--QEKVLMHAAVS 297 (408)
Q Consensus 221 ~vv-yvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~p--q~~lL~h~~v~ 297 (408)
++| .+|=||.-- ...++....++.+|..+.-.+.-.-. + +.+-++ +......+++
T Consensus 118 g~vgvlsAGTSDl---PvAeEa~~tae~lG~ev~~~~DvGVA--------G----------iHRLl~~l~r~~~~~~~~- 175 (254)
T COG1691 118 GKVGVLSAGTSDL---PVAEEAAVTAEELGVEVQKVYDVGVA--------G----------IHRLLSALKRLKIEDADV- 175 (254)
T ss_pred ceEEEEecCCCCc---chHHHHHHHHHHhCceEEEEEeeccc--------h----------HHhhhhHHHHHHhhCCCe-
Confidence 456 888888543 34556666677778776654433211 0 122345 5555666666
Q ss_pred eEEeccCcchHHHHHHcC---CceeeccCCC
Q 045998 298 CFLTHCGWNSTLETVAAG---VPVIAYPEWT 325 (408)
Q Consensus 298 ~fitHgG~~s~~eal~~G---vP~i~~P~~~ 325 (408)
.|--.|+-+.+-++.+| +|.|++|...
T Consensus 176 -lIVvAGMEGaLPsvvagLvD~PVIavPTsV 205 (254)
T COG1691 176 -LIVVAGMEGALPSVVAGLVDVPVIAVPTSV 205 (254)
T ss_pred -EEEEcccccchHHHHHhccCCCeEeccccc
Confidence 99999999888888776 8999999743
No 276
>PF05225 HTH_psq: helix-turn-helix, Psq domain; InterPro: IPR007889 This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster []. In pipsqueak this domain binds to GAGA sequence []. The pipsqueak family, which includes proteins from fungi, sea urchins, nematodes, insects, and vertebrates appear to be proteins essential for sequence-specific targeting of a polycomb group protein complex [].; GO: 0003677 DNA binding; PDB: 2COB_A.
Probab=22.35 E-value=1.3e+02 Score=19.53 Aligned_cols=26 Identities=19% Similarity=0.424 Sum_probs=18.9
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 045998 353 SIQQVQRCIDEATQGLNATQMKKRAVAW 380 (408)
Q Consensus 353 ~~~~l~~~i~~vl~~~~~~~~~~~a~~l 380 (408)
++++|..||..+.++. -++++.|++.
T Consensus 1 tee~l~~Ai~~v~~g~--~S~r~AA~~y 26 (45)
T PF05225_consen 1 TEEDLQKAIEAVKNGK--MSIRKAAKKY 26 (45)
T ss_dssp -HHHHHHHHHHHHTTS--S-HHHHHHHH
T ss_pred CHHHHHHHHHHHHhCC--CCHHHHHHHH
Confidence 4689999999998763 5777777765
No 277
>PLN03139 formate dehydrogenase; Provisional
Probab=22.10 E-value=4.7e+02 Score=25.93 Aligned_cols=73 Identities=10% Similarity=0.026 Sum_probs=44.2
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcce
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSC 298 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~ 298 (408)
.+.+-+|.+|.+. ..+++.+...|.+++. +.... .+....+. .++ .....-.++++.+++
T Consensus 199 gktVGIVG~G~IG-------~~vA~~L~afG~~V~~-~d~~~------~~~~~~~~--~g~--~~~~~l~ell~~sDv-- 258 (386)
T PLN03139 199 GKTVGTVGAGRIG-------RLLLQRLKPFNCNLLY-HDRLK------MDPELEKE--TGA--KFEEDLDAMLPKCDV-- 258 (386)
T ss_pred CCEEEEEeecHHH-------HHHHHHHHHCCCEEEE-ECCCC------cchhhHhh--cCc--eecCCHHHHHhhCCE--
Confidence 4568999999988 5677777788888755 33221 11111111 111 112256788999999
Q ss_pred EEeccCcchHHHH
Q 045998 299 FLTHCGWNSTLET 311 (408)
Q Consensus 299 fitHgG~~s~~ea 311 (408)
++.|+-.+.-.+.
T Consensus 259 V~l~lPlt~~T~~ 271 (386)
T PLN03139 259 VVINTPLTEKTRG 271 (386)
T ss_pred EEEeCCCCHHHHH
Confidence 9988876554444
No 278
>cd01425 RPS2 Ribosomal protein S2 (RPS2), involved in formation of the translation initiation complex, where it might contact the messenger RNA and several components of the ribosome. It has been shown that in Escherichia coli RPS2 is essential for the binding of ribosomal protein S1 to the 30s ribosomal subunit. In humans, most likely in all vertebrates, and perhaps in all metazoans, the protein also functions as the 67 kDa laminin receptor (LAMR1 or 67LR), which is formed from a 37 kDa precursor, and is overexpressed in many tumors. 67LR is a cell surface receptor which interacts with a variety of ligands, laminin-1 and others. It is assumed that the ligand interactions are mediated via the conserved C-terminus, which becomes extracellular as the protein undergoes conformational changes which are not well understood. Specifically, a conserved palindromic motif, LMWWML, may participate in the interactions. 67LR plays essential roles in the adhesion of cells to the basement membrane an
Probab=21.88 E-value=1.4e+02 Score=26.38 Aligned_cols=32 Identities=16% Similarity=0.125 Sum_probs=24.3
Q ss_pred CCccEEEE-CCCC-CcHHHHHHHcCCCeEEEecc
Q 045998 60 KKKSCIIT-NPFM-PWVPDVAAEHKIPCAVLWIQ 91 (408)
Q Consensus 60 ~~~D~vI~-D~~~-~~~~~vA~~lgIP~v~~~~~ 91 (408)
..||+||+ |+.. ..+..=|.++|||.+++.-+
T Consensus 126 ~~Pdlviv~~~~~~~~ai~Ea~~l~IP~I~i~Dt 159 (193)
T cd01425 126 RLPDLVIVLDPRKEHQAIREASKLGIPVIAIVDT 159 (193)
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEecC
Confidence 47898875 6655 47777799999999998543
No 279
>PF07905 PucR: Purine catabolism regulatory protein-like family; InterPro: IPR012914 This domain is found in the purine catabolism regulatory protein expressed by Bacillus subtilis (PucR, O32138 from SWISSPROT). PucR is thought to be a transcriptional regulator of genes involved in the purine degradation pathway, and may contain a LysR-like DNA-binding domain. It is similar to LysR-type regulators in that it represses its own expression []. The other members of this family are also putative regulatory proteins.
Probab=21.83 E-value=4.2e+02 Score=21.18 Aligned_cols=40 Identities=15% Similarity=0.250 Sum_probs=29.0
Q ss_pred hhhccCCCCceEEEecCCcccC-CHHHHHHHHHHHHhCCCCEEEE
Q 045998 212 QWLNKKPPSSVIYISFGSLLVL-SQNQIDSIAAALINTKRPFLWV 255 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~~~-~~~~~~~~~~al~~~~~~~iw~ 255 (408)
+|+..++ ++++-|-.... +.+.+..+++.|.+.+.--+.+
T Consensus 38 ~~l~~gE----lvlttg~~~~~~~~~~~~~~i~~L~~~~~agL~i 78 (123)
T PF07905_consen 38 DWLRGGE----LVLTTGYALRDDDEEELREFIRELAEKGAAGLGI 78 (123)
T ss_pred HhCCCCe----EEEECCcccCCCCHHHHHHHHHHHHHCCCeEEEE
Confidence 8877753 77776766655 5667889999999988755443
No 280
>PRK03372 ppnK inorganic polyphosphate/ATP-NAD kinase; Provisional
Probab=21.77 E-value=1.5e+02 Score=28.28 Aligned_cols=55 Identities=13% Similarity=0.187 Sum_probs=39.5
Q ss_pred hcccCcceEEeccCcchHHHHHHc----CCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 291 LMHAAVSCFLTHCGWNSTLETVAA----GVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 291 L~h~~v~~fitHgG~~s~~eal~~----GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
...+++ +|+=||=||++.+... ++|++++.+. .+|... .+..+++.+++++++.
T Consensus 70 ~~~~D~--vi~lGGDGT~L~aar~~~~~~~PilGIN~G--------------~lGFL~------~~~~~~~~~~l~~i~~ 127 (306)
T PRK03372 70 ADGCEL--VLVLGGDGTILRAAELARAADVPVLGVNLG--------------HVGFLA------EAEAEDLDEAVERVVD 127 (306)
T ss_pred ccCCCE--EEEEcCCHHHHHHHHHhccCCCcEEEEecC--------------CCceec------cCCHHHHHHHHHHHHc
Confidence 345677 9999999999998764 7898888431 133332 3456888888888887
Q ss_pred C
Q 045998 367 G 367 (408)
Q Consensus 367 ~ 367 (408)
+
T Consensus 128 g 128 (306)
T PRK03372 128 R 128 (306)
T ss_pred C
Confidence 5
No 281
>TIGR00730 conserved hypothetical protein, DprA/Smf-related, family 2. This model represents one branch of a subfamily of proteins of unknown function. Both PSI-BLAST and weak hits by this model show a low level of similarity to and suggest an evolutionary relationship of the subfamily to the DprA/Smf family of DNA-processing proteins involved in chromosomal transformation with foreign DNA. Both Aquifex aeolicus and Mycobacterium leprae have one member in each of two branches of this subfamily, suggesting that the branches may have distinct functions.
Probab=21.61 E-value=5.3e+02 Score=22.37 Aligned_cols=103 Identities=14% Similarity=0.093 Sum_probs=53.8
Q ss_pred hhhhhhhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecc-
Q 045998 207 CIEIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC- 285 (408)
Q Consensus 207 ~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~- 285 (408)
-.+|-++|.++ +..+|+-|. ....+.+++++..+.+-+++=++...-... ..+. ..-....+++-.
T Consensus 21 A~~lG~~la~~---g~~lV~GGg----~~GlM~a~a~ga~~~gG~viGi~p~~l~~~--~~~~----~~~~~~i~~~~~~ 87 (178)
T TIGR00730 21 AAELGAYLAGQ---GWGLVYGGG----RVGLMGAIADAAMENGGTAVGVNPSGLFSG--EVVH----QNLTELIEVNGMH 87 (178)
T ss_pred HHHHHHHHHHC---CCEEEECCC----hHhHHHHHHHHHHhcCCeEEEecchhhhhh--hccC----CCCCceEEECCHH
Confidence 45566777664 345666553 234556777777776666544332110000 0000 001223344333
Q ss_pred cHHHHhcccCcceEEeccCcchHHHHHH---------cCCceeecc
Q 045998 286 SQEKVLMHAAVSCFLTHCGWNSTLETVA---------AGVPVIAYP 322 (408)
Q Consensus 286 pq~~lL~h~~v~~fitHgG~~s~~eal~---------~GvP~i~~P 322 (408)
....+|-..+-..++--||.||+-|.+. +.+|++.+=
T Consensus 88 ~Rk~~m~~~sda~I~lPGG~GTL~El~e~~~~~qlg~~~kPiil~n 133 (178)
T TIGR00730 88 ERKAMMAELADAFIAMPGGFGTLEELFEVLTWAQLGIHQKPIILFN 133 (178)
T ss_pred HHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHHcCCCCCCEEEEC
Confidence 3444555544445666788999887632 488888864
No 282
>PRK12474 hypothetical protein; Provisional
Probab=21.50 E-value=2.5e+02 Score=28.89 Aligned_cols=28 Identities=18% Similarity=0.185 Sum_probs=22.0
Q ss_pred CcceEEeccCcc------hHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGWN------STLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~~------s~~eal~~GvP~i~~P 322 (408)
..+++++|.|-| ++.+|...++|+|++-
T Consensus 68 ~~gv~~~t~GpG~~N~~~gl~~A~~d~~Pvl~i~ 101 (518)
T PRK12474 68 KPAVTLLHLGPGLANGLANLHNARRAASPIVNIV 101 (518)
T ss_pred CCEEEEEccchhHhHhHHHHHHHhhcCCCEEEEe
Confidence 345588888844 6778999999999985
No 283
>PRK15424 propionate catabolism operon regulatory protein PrpR; Provisional
Probab=21.46 E-value=2.2e+02 Score=29.66 Aligned_cols=30 Identities=17% Similarity=0.171 Sum_probs=24.8
Q ss_pred ccCcceEEeccCcchHHHHHHcCCceeeccCCC
Q 045998 293 HAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWT 325 (408)
Q Consensus 293 h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~ 325 (408)
++++ +|+.||....+.. +..+|+|-++..+
T Consensus 64 ~~dv--iIsrG~ta~~i~~-~~~iPVv~i~~s~ 93 (538)
T PRK15424 64 RCDA--IIAAGSNGAYLKS-RLSVPVILIKPSG 93 (538)
T ss_pred CCcE--EEECchHHHHHHh-hCCCCEEEecCCH
Confidence 4566 9999999999888 4679999999854
No 284
>TIGR03164 UHCUDC OHCU decarboxylase. Previously thought to only proceed spontaneously, the decarboxylation of 2-oxo-4-hydroxy-4-carboxy--5-ureidoimidazoline (OHCU) has been recently been shown to be catalyzed by this enzyme in Mus musculus. Homologs of this enzyme are found adjacent to and fused with uricase in a number of prokaryotes and are represented by this model.
Probab=21.32 E-value=4.6e+02 Score=22.26 Aligned_cols=56 Identities=9% Similarity=0.033 Sum_probs=43.5
Q ss_pred hhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 045998 327 QPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 327 Q~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 386 (408)
+..|..+-++ +|.-..+.- ...+.++|-..+++=|.|......+..+.++.+..+-
T Consensus 97 ~~lN~~Y~~k-FGfpFvi~v---~g~~~~~Il~~l~~Rl~n~~~~E~~~a~~Ev~kIa~~ 152 (157)
T TIGR03164 97 TRLNNAYRAR-FGFPFIMAV---KGKTKQSILAAFEARLNNDRETEFARALREIERIARF 152 (157)
T ss_pred HHHHHHHHHH-CCCeeEEee---CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 3458999998 998888886 4458899999998888876556777777777776654
No 285
>PRK04020 rps2P 30S ribosomal protein S2; Provisional
Probab=21.09 E-value=1.1e+02 Score=27.29 Aligned_cols=30 Identities=23% Similarity=0.229 Sum_probs=23.4
Q ss_pred CccEEE-ECCCC-CcHHHHHHHcCCCeEEEec
Q 045998 61 KKSCII-TNPFM-PWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 61 ~~D~vI-~D~~~-~~~~~vA~~lgIP~v~~~~ 90 (408)
.||+|| .|+.. .-+..=|.++|||.|.+.-
T Consensus 114 ~Pdliiv~dp~~~~~AI~EA~kl~IP~IaivD 145 (204)
T PRK04020 114 EPDVVVVTDPRGDAQAVKEAIEVGIPVVALCD 145 (204)
T ss_pred CCCEEEEECCcccHHHHHHHHHhCCCEEEEEe
Confidence 488776 57766 5777779999999999853
No 286
>PF00282 Pyridoxal_deC: Pyridoxal-dependent decarboxylase conserved domain; InterPro: IPR002129 Pyridoxal phosphate is the active form of vitamin B6 (pyridoxine or pyridoxal). Pyridoxal 5'-phosphate (PLP) is a versatile catalyst, acting as a coenzyme in a multitude of reactions, including decarboxylation, deamination and transamination [, , ]. PLP-dependent enzymes are primarily involved in the biosynthesis of amino acids and amino acid-derived metabolites, but they are also found in the biosynthetic pathways of amino sugars and in the synthesis or catabolism of neurotransmitters; pyridoxal phosphate can also inhibit DNA polymerases and several steroid receptors []. Inadequate levels of pyridoxal phosphate in the brain can cause neurological dysfunction, particularly epilepsy []. PLP enzymes exist in their resting state as a Schiff base, the aldehyde group of PLP forming a linkage with the epsilon-amino group of an active site lysine residue on the enzyme. The alpha-amino group of the substrate displaces the lysine epsilon-amino group, in the process forming a new aldimine with the substrate. This aldimine is the common central intermediate for all PLP-catalysed reactions, enzymatic and non-enzymatic []. A number of pyridoxal-dependent decarboxylases share regions of sequence similarity, particularly in the vicinity of a conserved lysine residue, which provides the attachment site for the pyridoxal-phosphate (PLP) group [, ]. Among these enzymes are aromatic-L-amino-acid decarboxylase (L-dopa decarboxylase or tryptophan decarboxylase), which catalyses the decarboxylation of tryptophan to tryptamine []; tyrosine decarboxylase, which converts tyrosine into tyramine; and histidine decarboxylase, which catalyses the decarboxylation of histidine to histamine []. These enzymes belong to the group II decarboxylases [, ].; GO: 0016831 carboxy-lyase activity, 0030170 pyridoxal phosphate binding, 0019752 carboxylic acid metabolic process; PDB: 3MC6_A 1XEY_A 1ES0_B 2OKK_A 2JIS_B 2QMA_A 3MAF_B 3MAD_B 3MAU_A 3MBB_A ....
Probab=21.08 E-value=1.7e+02 Score=28.72 Aligned_cols=69 Identities=23% Similarity=0.331 Sum_probs=45.7
Q ss_pred cceEEeccCcchHHHHHHcC-----------------CceeeccCCCChhhhHHhhhceeeeEEEee-cCCCCCcCHHHH
Q 045998 296 VSCFLTHCGWNSTLETVAAG-----------------VPVIAYPEWTDQPTDAKLLVDVFKIGVRMR-NEEDGTLSIQQV 357 (408)
Q Consensus 296 v~~fitHgG~~s~~eal~~G-----------------vP~i~~P~~~DQ~~na~~v~~~~g~G~~l~-~~~~~~~~~~~l 357 (408)
.++++|.||..+.+-|+.++ .|.+.++-.. ++-..+.+.- +|+|++.- .+++..++.++|
T Consensus 104 ~~G~~t~Ggt~anl~al~aAR~~~~~~~~~~~~~~~~~~~i~~s~~a-H~S~~Kaa~~-lGlg~~~I~~~~~~~md~~~L 181 (373)
T PF00282_consen 104 AGGVFTSGGTEANLYALLAARERALPRSKAKGVEEIPKPVIYVSEQA-HYSIEKAARI-LGLGVRKIPTDEDGRMDIEAL 181 (373)
T ss_dssp SEEEEESSHHHHHHHHHHHHHHHHHHHHHHHTTTHCSSEEEEEETTS--THHHHHHHH-TTSEEEEE-BBTTSSB-HHHH
T ss_pred CceeEeccchHHHHHHHHHHHHHHhhhhhhccccccccccccccccc-ccHHHHhcce-eeeEEEEecCCcchhhhHHHh
Confidence 57899999988887775332 4566665434 4555555554 78886543 344578899999
Q ss_pred HHHHHHHhc
Q 045998 358 QRCIDEATQ 366 (408)
Q Consensus 358 ~~~i~~vl~ 366 (408)
+++|++...
T Consensus 182 ~~~l~~~~~ 190 (373)
T PF00282_consen 182 EKALEKDIA 190 (373)
T ss_dssp HHHHHHHHH
T ss_pred hhhhccccc
Confidence 999987654
No 287
>PF07355 GRDB: Glycine/sarcosine/betaine reductase selenoprotein B (GRDB); InterPro: IPR022787 This entry represents selenoprotein B of glycine reductase, sarcosine reductase, betaine reductase, D-proline reductase, and perhaps others. All members are expected to contain an internal UGA codon, encoding selenocysteine, which may be misinterpreted as a stop codon. ; GO: 0030699 glycine reductase activity, 0050485 oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with a disulfide as acceptor, 0055114 oxidation-reduction process, 0030700 glycine reductase complex
Probab=20.87 E-value=2.1e+02 Score=27.88 Aligned_cols=29 Identities=21% Similarity=0.222 Sum_probs=20.7
Q ss_pred CCccEEEECCCCCc-------H---HHHHHHcCCCeEEE
Q 045998 60 KKKSCIITNPFMPW-------V---PDVAAEHKIPCAVL 88 (408)
Q Consensus 60 ~~~D~vI~D~~~~~-------~---~~vA~~lgIP~v~~ 88 (408)
.+||++|+-+.+.. + ..+.++++||++.-
T Consensus 79 ~~pD~viaGPaFnagrYG~acg~v~~aV~e~~~IP~vta 117 (349)
T PF07355_consen 79 LKPDVVIAGPAFNAGRYGVACGEVAKAVQEKLGIPVVTA 117 (349)
T ss_pred cCCCEEEEcCCcCCchHHHHHHHHHHHHHHhhCCCEEEE
Confidence 47999999997632 1 23456899998753
No 288
>PRK06436 glycerate dehydrogenase; Provisional
Probab=20.86 E-value=5.2e+02 Score=24.56 Aligned_cols=65 Identities=9% Similarity=0.043 Sum_probs=41.4
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcce
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSC 298 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~ 298 (408)
.+.+-++.+|++. ..++.-+...|.+++.. .... .+ .... ..+.+..++|+.+++
T Consensus 122 gktvgIiG~G~IG-------~~vA~~l~afG~~V~~~-~r~~------~~--------~~~~-~~~~~l~ell~~aDi-- 176 (303)
T PRK06436 122 NKSLGILGYGGIG-------RRVALLAKAFGMNIYAY-TRSY------VN--------DGIS-SIYMEPEDIMKKSDF-- 176 (303)
T ss_pred CCEEEEECcCHHH-------HHHHHHHHHCCCEEEEE-CCCC------cc--------cCcc-cccCCHHHHHhhCCE--
Confidence 3568899999988 45666666678876543 2211 01 1111 114567789999999
Q ss_pred EEeccCcchH
Q 045998 299 FLTHCGWNST 308 (408)
Q Consensus 299 fitHgG~~s~ 308 (408)
++.|+-.+.-
T Consensus 177 v~~~lp~t~~ 186 (303)
T PRK06436 177 VLISLPLTDE 186 (303)
T ss_pred EEECCCCCch
Confidence 9999886543
No 289
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=20.74 E-value=5.9e+02 Score=23.67 Aligned_cols=37 Identities=14% Similarity=0.329 Sum_probs=27.1
Q ss_pred CChhhhHHhhhceeeeEEEeecCCCCC-cCHHHHHHHHH
Q 045998 325 TDQPTDAKLLVDVFKIGVRMRNEEDGT-LSIQQVQRCID 362 (408)
Q Consensus 325 ~DQ~~na~~v~~~~g~G~~l~~~~~~~-~~~~~l~~~i~ 362 (408)
+.+..|...+++ +++.+.+.++..+. -+.+.+..|.+
T Consensus 183 fs~~~n~all~q-~~id~vItK~SG~~Gg~~~Ki~aA~e 220 (257)
T COG2099 183 FSEEDNKALLEQ-YRIDVVVTKNSGGAGGTYEKIEAARE 220 (257)
T ss_pred cChHHHHHHHHH-hCCCEEEEccCCcccCcHHHHHHHHH
Confidence 567788888888 89999988755444 66677766654
No 290
>cd03786 GT1_UDP-GlcNAc_2-Epimerase Bacterial members of the UDP-N-Acetylglucosamine (GlcNAc) 2-Epimerase family are known to catalyze the reversible interconversion of UDP-GlcNAc and UDP-N-acetylmannosamine (UDP-ManNAc). The enzyme serves to produce an activated form of ManNAc residues (UDP-ManNAc) for use in the biosynthesis of a variety of cell surface polysaccharides; The mammalian enzyme is bifunctional, catalyzing both the inversion of stereochemistry at C-2 and the hydrolysis of the UDP-sugar linkage to generate free ManNAc. It also catalyzes the phosphorylation of ManNAc to generate ManNAc 6-phosphate, a precursor to salic acids. In mammals, sialic acids are found at the termini of oligosaccharides in a large variety of cell surface glycoconjugates and are key mediators of cell-cell recognition events. Mutations in human members of this family have been associated with Sialuria, a rare disease caused by the disorders of sialic acid metabolism. This family belongs to the GT-B st
Probab=20.72 E-value=1.4e+02 Score=28.54 Aligned_cols=29 Identities=17% Similarity=0.006 Sum_probs=20.5
Q ss_pred CCccEEEECCC--C-CcHHHHHHHcCCCeEEE
Q 045998 60 KKKSCIITNPF--M-PWVPDVAAEHKIPCAVL 88 (408)
Q Consensus 60 ~~~D~vI~D~~--~-~~~~~vA~~lgIP~v~~ 88 (408)
.+||+|++-.. . .++..+|..+|||++.+
T Consensus 87 ~~pDvV~~~g~~~~~~~~~~aa~~~~iPvv~~ 118 (363)
T cd03786 87 EKPDLVLVLGDTNETLAAALAAFKLGIPVAHV 118 (363)
T ss_pred hCCCEEEEeCCchHHHHHHHHHHHcCCCEEEE
Confidence 47999987532 2 34566778899998754
No 291
>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]
Probab=20.58 E-value=7.9e+02 Score=23.87 Aligned_cols=106 Identities=15% Similarity=0.215 Sum_probs=62.3
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcce
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSC 298 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~ 298 (408)
.+.|..+.||++. ..+++-|...++.+....+.... ++...+... ..+.-.++++.+++
T Consensus 162 gK~vgilG~G~IG-------~~ia~rL~~Fg~~i~y~~r~~~~------~~~~~~~~~------~~~d~~~~~~~sD~-- 220 (336)
T KOG0069|consen 162 GKTVGILGLGRIG-------KAIAKRLKPFGCVILYHSRTQLP------PEEAYEYYA------EFVDIEELLANSDV-- 220 (336)
T ss_pred CCEEEEecCcHHH-------HHHHHhhhhccceeeeecccCCc------hhhHHHhcc------cccCHHHHHhhCCE--
Confidence 4568999999998 46677777777555554443221 111111111 15566677777777
Q ss_pred EEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEe-ecCCCCCcCHHHHHHHHH
Q 045998 299 FLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRM-RNEEDGTLSIQQVQRCID 362 (408)
Q Consensus 299 fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l-~~~~~~~~~~~~l~~~i~ 362 (408)
+|-||=.+--. ..-.|...+++ ++-|..+ +..+...++.+.+.++++
T Consensus 221 ivv~~pLt~~T----------------~~liNk~~~~~-mk~g~vlVN~aRG~iide~~l~eaL~ 268 (336)
T KOG0069|consen 221 IVVNCPLTKET----------------RHLINKKFIEK-MKDGAVLVNTARGAIIDEEALVEALK 268 (336)
T ss_pred EEEecCCCHHH----------------HHHhhHHHHHh-cCCCeEEEeccccccccHHHHHHHHh
Confidence 66665433222 23567777777 6655544 344456777777777775
No 292
>PF04493 Endonuclease_5: Endonuclease V; InterPro: IPR007581 Endonuclease V is specific for single-stranded DNA, for duplex DNA that contains uracil, or that is damaged []. Matrix metalloproteinase-1 (MMP-1) is the major enzyme responsible for collagen 1 digestion. It is induced by exposure to sunlight, but is reduced with treatment of DNA repair enzyme endonuclease V []. This family consequently has potential medical importance []. This endonuclease also appears in bifunctional enzymes, such as the bifunctional methyltransferase/endonuclease in Thermoplasma acidophilum.; GO: 0004519 endonuclease activity, 0006281 DNA repair; PDB: 3GA2_A 2W36_A 3HD0_A 2W35_B 3GOC_B.
Probab=20.14 E-value=1.1e+02 Score=27.31 Aligned_cols=40 Identities=13% Similarity=0.165 Sum_probs=23.8
Q ss_pred HHHHHHHHHhhcCCCCccEEEECCCC-------CcHHHHHHHcCCCeEEE
Q 045998 46 KNLSSIINNLSNNDKKKSCIITNPFM-------PWVPDVAAEHKIPCAVL 88 (408)
Q Consensus 46 ~~l~~ll~~l~~~~~~~D~vI~D~~~-------~~~~~vA~~lgIP~v~~ 88 (408)
+.+-++++++. .++|+|++|..- ..+..++-.+++|+|.+
T Consensus 77 P~~l~~l~~l~---~~~dvilvDG~G~~HpR~~GlA~HlGv~l~iPtIGV 123 (206)
T PF04493_consen 77 PCILEALEKLK---NKPDVILVDGHGILHPRRFGLASHLGVLLDIPTIGV 123 (206)
T ss_dssp HHHHHHHHTSS---S--SCEEEES-SSSSTTS--HHHHHHHHHTS-EEEE
T ss_pred HHHHHHHHHhc---ccCCEEEEeCceeecCCCcChhheeeeccCCCEEEE
Confidence 44555666664 478999999864 23455556678998886
Done!