Query 045998
Match_columns 408
No_of_seqs 207 out of 1779
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 13:12:56 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045998.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045998hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hbf_A Flavonoid 3-O-glucosylt 100.0 5.4E-66 1.9E-70 515.5 32.1 374 11-407 66-454 (454)
2 2c1x_A UDP-glucose flavonoid 3 100.0 5.4E-58 1.9E-62 460.8 34.1 372 12-407 62-452 (456)
3 2vch_A Hydroquinone glucosyltr 100.0 9E-57 3.1E-61 454.7 40.0 378 12-407 61-469 (480)
4 2pq6_A UDP-glucuronosyl/UDP-gl 100.0 1.1E-57 3.8E-62 462.2 33.2 386 12-407 64-479 (482)
5 2acv_A Triterpene UDP-glucosyl 100.0 5E-55 1.7E-59 440.2 35.0 372 12-406 67-462 (463)
6 2iya_A OLEI, oleandomycin glyc 100.0 3.1E-35 1E-39 292.7 27.3 344 8-402 54-417 (424)
7 1iir_A Glycosyltransferase GTF 100.0 3.2E-33 1.1E-37 277.6 22.3 313 9-385 43-383 (415)
8 1rrv_A Glycosyltransferase GTF 100.0 8.5E-33 2.9E-37 274.5 20.5 312 9-385 43-384 (416)
9 4amg_A Snogd; transferase, pol 100.0 1.5E-32 5E-37 270.7 18.6 154 212-386 229-384 (400)
10 3rsc_A CALG2; TDP, enediyne, s 100.0 1.7E-29 5.8E-34 250.2 23.0 334 8-405 62-412 (415)
11 3h4t_A Glycosyltransferase GTF 100.0 7.9E-30 2.7E-34 252.3 19.9 159 205-385 208-366 (404)
12 2iyf_A OLED, oleandomycin glyc 100.0 2.5E-29 8.6E-34 250.2 23.0 319 9-386 50-383 (430)
13 3ia7_A CALG4; glycosysltransfe 100.0 2.3E-28 8E-33 240.4 26.6 339 8-405 46-397 (402)
14 2p6p_A Glycosyl transferase; X 100.0 2.9E-28 9.9E-33 239.0 23.9 268 47-401 95-374 (384)
15 2o6l_A UDP-glucuronosyltransfe 100.0 3.8E-28 1.3E-32 211.2 16.9 164 205-386 6-170 (170)
16 2yjn_A ERYCIII, glycosyltransf 100.0 9.2E-28 3.1E-32 240.1 19.2 158 212-386 259-419 (441)
17 3oti_A CALG3; calicheamicin, T 99.9 5.9E-26 2E-30 223.7 15.5 168 212-405 224-395 (398)
18 4fzr_A SSFS6; structural genom 99.9 2.4E-25 8.2E-30 219.3 17.2 158 212-386 219-384 (398)
19 3tsa_A SPNG, NDP-rhamnosyltran 99.9 8.2E-23 2.8E-27 200.5 22.5 170 212-401 210-383 (391)
20 3otg_A CALG1; calicheamicin, T 99.9 2E-21 6.9E-26 191.7 27.5 169 212-401 233-403 (412)
21 3s2u_A UDP-N-acetylglucosamine 99.8 3.7E-17 1.3E-21 159.2 23.2 168 219-406 179-355 (365)
22 2jzc_A UDP-N-acetylglucosamine 99.5 2.3E-14 7.8E-19 128.7 8.6 140 213-364 21-196 (224)
23 1f0k_A MURG, UDP-N-acetylgluco 99.4 7.5E-12 2.6E-16 120.7 19.9 143 219-378 182-331 (364)
24 3hbm_A UDP-sugar hydrolase; PS 98.9 5.4E-09 1.9E-13 97.3 9.5 115 220-346 157-274 (282)
25 3dzc_A UDP-N-acetylglucosamine 98.7 2.9E-07 9.8E-12 90.2 15.1 154 219-399 229-392 (396)
26 3ot5_A UDP-N-acetylglucosamine 98.7 3.3E-07 1.1E-11 89.9 15.6 160 219-405 223-392 (403)
27 3okp_A GDP-mannose-dependent a 98.5 8.5E-05 2.9E-09 71.4 26.7 130 221-367 198-344 (394)
28 4hwg_A UDP-N-acetylglucosamine 98.5 1.4E-06 4.7E-11 85.0 13.4 131 220-368 203-343 (385)
29 2f9f_A First mannosyl transfer 98.4 2.4E-06 8.1E-11 73.5 11.0 128 223-368 25-163 (177)
30 1v4v_A UDP-N-acetylglucosamine 98.2 4.3E-06 1.5E-10 80.5 9.3 136 219-378 197-342 (376)
31 2gek_A Phosphatidylinositol ma 98.2 0.00087 3E-08 64.6 25.5 129 222-367 209-349 (406)
32 1vgv_A UDP-N-acetylglucosamine 98.1 2.7E-05 9.3E-10 74.9 13.0 129 219-367 204-342 (384)
33 3fro_A GLGA glycogen synthase; 98.0 0.0014 4.8E-08 63.7 23.0 145 222-381 252-411 (439)
34 3beo_A UDP-N-acetylglucosamine 97.8 0.00017 5.8E-09 69.0 12.4 129 219-367 204-342 (375)
35 2iw1_A Lipopolysaccharide core 97.8 0.00038 1.3E-08 66.3 14.4 130 221-367 196-337 (374)
36 3c48_A Predicted glycosyltrans 97.6 0.00097 3.3E-08 65.1 15.5 95 276-382 305-407 (438)
37 4gyw_A UDP-N-acetylglucosamine 97.5 0.00098 3.4E-08 70.0 13.7 102 218-322 520-629 (723)
38 2jjm_A Glycosyl transferase, g 97.5 0.0017 5.8E-08 62.5 14.4 131 221-367 211-350 (394)
39 3qhp_A Type 1 capsular polysac 97.4 0.002 6.8E-08 53.8 12.8 128 221-367 2-140 (166)
40 2vsy_A XCC0866; transferase, g 97.4 0.0024 8.3E-08 64.7 15.4 134 222-367 378-522 (568)
41 2x6q_A Trehalose-synthase TRET 97.4 0.008 2.8E-07 58.2 18.2 78 276-367 292-379 (416)
42 3q3e_A HMW1C-like glycosyltran 97.4 0.0015 5E-08 66.6 12.7 137 221-367 441-588 (631)
43 2iuy_A Avigt4, glycosyltransfe 97.2 0.001 3.5E-08 62.8 9.6 128 223-366 164-307 (342)
44 2bfw_A GLGA glycogen synthase; 97.2 0.0042 1.4E-07 53.5 12.8 77 278-367 96-181 (200)
45 2r60_A Glycosyl transferase, g 97.1 0.0039 1.3E-07 62.1 13.1 80 276-367 334-424 (499)
46 3oy2_A Glycosyltransferase B73 97.1 0.013 4.5E-07 56.5 16.0 75 279-367 256-355 (413)
47 2xci_A KDO-transferase, 3-deox 97.1 0.0033 1.1E-07 60.5 11.5 97 278-384 261-363 (374)
48 1rzu_A Glycogen synthase 1; gl 96.7 0.065 2.2E-06 52.8 17.3 130 222-365 292-438 (485)
49 2qzs_A Glycogen synthase; glyc 96.5 0.078 2.7E-06 52.3 16.5 131 221-365 292-439 (485)
50 3rhz_A GTF3, nucleotide sugar 96.4 0.0055 1.9E-07 58.2 7.4 110 278-404 215-336 (339)
51 3s28_A Sucrose synthase 1; gly 95.2 0.13 4.6E-06 54.4 12.2 78 276-365 639-728 (816)
52 2x0d_A WSAF; GT4 family, trans 95.0 0.11 3.8E-06 50.5 10.3 78 277-367 295-379 (413)
53 2hy7_A Glucuronosyltransferase 94.8 0.21 7.3E-06 48.2 11.9 114 222-368 223-353 (406)
54 3tov_A Glycosyl transferase fa 92.0 0.41 1.4E-05 45.3 8.2 96 219-321 184-286 (349)
55 3vue_A GBSS-I, granule-bound s 91.4 4.2 0.00014 40.7 15.3 135 223-366 329-476 (536)
56 1psw_A ADP-heptose LPS heptosy 88.7 1.5 5.2E-05 40.8 9.0 96 219-321 179-286 (348)
57 2gt1_A Lipopolysaccharide hept 86.4 1.1 3.8E-05 41.5 6.4 137 219-367 177-322 (326)
58 3t5t_A Putative glycosyltransf 79.0 17 0.00059 35.9 11.8 110 278-407 353-472 (496)
59 1uqt_A Alpha, alpha-trehalose- 78.8 14 0.00048 36.3 11.2 108 279-407 333-453 (482)
60 3nb0_A Glycogen [starch] synth 75.1 3.5 0.00012 42.5 5.7 47 276-324 489-551 (725)
61 2iz6_A Molybdenum cofactor car 69.5 38 0.0013 28.2 10.0 45 280-324 92-140 (176)
62 4b4k_A N5-carboxyaminoimidazol 55.2 92 0.0031 26.0 12.9 143 220-390 22-176 (181)
63 2lpm_A Two-component response 54.1 9.9 0.00034 29.7 3.4 38 49-88 43-85 (123)
64 3to5_A CHEY homolog; alpha(5)b 53.3 15 0.00051 29.1 4.4 33 60-92 56-97 (134)
65 3dfz_A SIRC, precorrin-2 dehyd 52.4 25 0.00086 30.6 6.1 155 212-387 25-186 (223)
66 3gl9_A Response regulator; bet 48.7 29 0.001 26.0 5.4 42 48-91 35-85 (122)
67 3l7i_A Teichoic acid biosynthe 45.6 41 0.0014 34.7 7.5 110 283-406 605-719 (729)
68 3s2u_A UDP-N-acetylglucosamine 42.3 61 0.0021 30.1 7.6 94 221-320 4-120 (365)
69 4e5s_A MCCFLIKE protein (BA_56 41.8 26 0.00087 32.6 4.6 72 234-323 63-136 (331)
70 1ydh_A AT5G11950; structural g 40.2 77 0.0026 27.3 7.2 44 279-323 89-143 (216)
71 3t6k_A Response regulator rece 37.8 48 0.0016 25.3 5.2 41 49-91 38-87 (136)
72 4h1h_A LMO1638 protein; MCCF-l 37.5 33 0.0011 31.7 4.7 72 234-323 63-136 (327)
73 3m6m_D Sensory/regulatory prot 35.8 39 0.0014 26.1 4.4 41 49-91 48-99 (143)
74 2a33_A Hypothetical protein; s 34.4 2.2E+02 0.0074 24.4 9.1 44 280-323 94-147 (215)
75 1t35_A Hypothetical protein YV 32.4 2.1E+02 0.0073 23.8 8.7 104 207-323 22-135 (191)
76 3f6p_A Transcriptional regulat 32.4 60 0.0021 24.0 4.8 42 48-91 35-82 (120)
77 3sr3_A Microcin immunity prote 31.9 48 0.0016 30.8 4.8 72 234-323 64-137 (336)
78 1kyq_A Met8P, siroheme biosynt 31.1 2.8E+02 0.0097 24.6 12.5 157 213-388 8-211 (274)
79 1zl0_A Hypothetical protein PA 30.5 52 0.0018 30.2 4.7 74 233-324 64-139 (311)
80 1gvf_A Tagatose-bisphosphate a 30.3 2.1E+02 0.007 25.8 8.6 24 207-231 157-180 (286)
81 3o1l_A Formyltetrahydrofolate 29.9 2.9E+02 0.01 25.0 9.6 107 235-365 167-275 (302)
82 3kxe_C Antitoxin protein PARD- 29.3 79 0.0027 23.0 4.6 50 353-408 30-79 (88)
83 1pjq_A CYSG, siroheme synthase 28.4 2.4E+02 0.0082 27.1 9.4 149 219-388 12-169 (457)
84 2q5c_A NTRC family transcripti 28.0 84 0.0029 26.5 5.3 44 46-94 129-172 (196)
85 1dbw_A Transcriptional regulat 27.8 1E+02 0.0034 22.8 5.4 41 49-91 37-84 (126)
86 1u0t_A Inorganic polyphosphate 27.7 75 0.0025 28.9 5.3 32 290-323 72-107 (307)
87 2w36_A Endonuclease V; hypoxan 27.6 45 0.0015 29.1 3.5 39 47-88 92-137 (225)
88 3gt7_A Sensor protein; structu 27.5 90 0.0031 24.2 5.3 41 48-90 40-89 (154)
89 1rcu_A Conserved hypothetical 27.3 2.8E+02 0.0095 23.3 10.0 98 207-323 47-150 (195)
90 3c3m_A Response regulator rece 26.4 92 0.0031 23.5 5.0 40 49-90 37-85 (138)
91 3nrb_A Formyltetrahydrofolate 26.3 2.3E+02 0.0078 25.5 8.2 115 238-380 154-270 (287)
92 3obi_A Formyltetrahydrofolate 26.1 2.5E+02 0.0086 25.2 8.4 115 238-380 155-271 (288)
93 3lyh_A Cobalamin (vitamin B12) 25.7 1.1E+02 0.0037 23.4 5.2 37 219-255 5-41 (126)
94 3a10_A Response regulator; pho 25.6 1.3E+02 0.0044 21.6 5.6 40 49-90 35-81 (116)
95 2q5c_A NTRC family transcripti 25.3 36 0.0012 28.8 2.5 31 294-325 50-80 (196)
96 1wek_A Hypothetical protein TT 25.2 2.7E+02 0.0093 23.8 8.2 101 207-322 58-169 (217)
97 1v5e_A Pyruvate oxidase; oxido 25.0 94 0.0032 31.1 5.9 80 238-322 7-101 (590)
98 3bbn_B Ribosomal protein S2; s 25.0 49 0.0017 28.9 3.3 29 61-89 157-187 (231)
99 3qua_A Putative uncharacterize 24.8 3.1E+02 0.011 23.1 8.4 45 278-323 100-155 (199)
100 1ybh_A Acetolactate synthase, 24.6 1.7E+02 0.0058 29.2 7.7 28 295-322 75-108 (590)
101 2x7j_A 2-succinyl-5-enolpyruvy 24.5 2E+02 0.0068 28.8 8.2 120 236-366 32-185 (604)
102 2xvy_A Chelatase, putative; me 24.4 87 0.003 27.6 5.0 39 220-258 10-50 (269)
103 3sbx_A Putative uncharacterize 24.3 3.1E+02 0.011 22.9 8.5 43 279-322 92-145 (189)
104 3cg0_A Response regulator rece 24.1 89 0.003 23.5 4.5 42 48-91 43-91 (140)
105 2rjn_A Response regulator rece 24.1 1.1E+02 0.0038 23.5 5.2 43 48-92 40-89 (154)
106 1q6z_A BFD, BFDC, benzoylforma 24.0 1.8E+02 0.0063 28.4 7.8 77 238-321 5-95 (528)
107 2pju_A Propionate catabolism o 24.0 65 0.0022 28.0 3.9 29 294-325 64-92 (225)
108 3n0v_A Formyltetrahydrofolate 24.0 2.9E+02 0.01 24.7 8.5 114 239-380 156-271 (286)
109 3nhm_A Response regulator; pro 23.7 1.4E+02 0.0047 22.1 5.6 40 49-90 37-85 (133)
110 2qr3_A Two-component system re 23.5 1.1E+02 0.0038 22.9 5.0 41 49-91 37-89 (140)
111 3lou_A Formyltetrahydrofolate 23.3 4.1E+02 0.014 23.8 9.8 103 239-365 161-265 (292)
112 3ors_A N5-carboxyaminoimidazol 23.3 2.5E+02 0.0086 22.9 7.0 144 221-389 4-156 (163)
113 2rdm_A Response regulator rece 23.2 1.3E+02 0.0045 22.1 5.3 41 49-90 39-87 (132)
114 4e7p_A Response regulator; DNA 23.2 1.3E+02 0.0043 23.1 5.4 42 48-91 55-103 (150)
115 3eod_A Protein HNR; response r 23.2 1.2E+02 0.004 22.4 5.0 43 48-92 40-89 (130)
116 3grc_A Sensor protein, kinase; 23.0 1.2E+02 0.0042 22.7 5.2 41 48-90 39-88 (140)
117 3hww_A 2-succinyl-5-enolpyruvy 22.7 78 0.0027 31.4 4.8 28 295-322 71-104 (556)
118 2a9o_A Response regulator; ess 22.7 1.1E+02 0.0039 22.0 4.7 33 60-92 44-82 (120)
119 3qxc_A Dethiobiotin synthetase 22.6 1E+02 0.0035 27.0 5.0 42 48-92 121-171 (242)
120 3q94_A Fructose-bisphosphate a 22.4 4.2E+02 0.015 23.7 9.5 24 207-231 161-184 (288)
121 2l82_A Designed protein OR32; 22.3 1.4E+02 0.0049 22.5 4.9 35 222-260 3-37 (162)
122 1t9b_A Acetolactate synthase, 22.1 2.2E+02 0.0075 29.0 8.1 81 237-322 84-178 (677)
123 1qkk_A DCTD, C4-dicarboxylate 21.9 2.2E+02 0.0074 21.8 6.6 63 314-385 74-136 (155)
124 1tmy_A CHEY protein, TMY; chem 21.8 1E+02 0.0035 22.3 4.3 41 49-91 37-84 (120)
125 3jte_A Response regulator rece 21.8 1.3E+02 0.0043 22.7 5.0 43 49-91 37-86 (143)
126 3lq1_A 2-succinyl-5-enolpyruvy 21.6 1.4E+02 0.0049 29.6 6.5 81 237-322 13-107 (578)
127 4dik_A Flavoprotein; TM0755, e 21.6 91 0.0031 29.7 4.7 47 208-254 253-299 (410)
128 3cu5_A Two component transcrip 21.3 1.2E+02 0.0042 23.0 4.8 39 49-89 39-84 (141)
129 3b2n_A Uncharacterized protein 21.3 1E+02 0.0035 23.1 4.3 41 49-91 39-86 (133)
130 1ozh_A ALS, acetolactate synth 21.2 1.4E+02 0.0049 29.5 6.4 28 295-322 73-106 (566)
131 3gi1_A LBP, laminin-binding pr 21.1 1.8E+02 0.0062 26.0 6.5 41 46-88 215-257 (286)
132 2pl1_A Transcriptional regulat 21.1 1.6E+02 0.0056 21.1 5.4 41 49-91 34-81 (121)
133 2pju_A Propionate catabolism o 21.1 70 0.0024 27.8 3.5 41 45-90 140-180 (225)
134 3ip0_A 2-amino-4-hydroxy-6-hyd 21.0 90 0.0031 25.5 3.9 28 222-249 2-29 (158)
135 3tla_A MCCF; serine protease, 21.0 82 0.0028 29.6 4.2 27 234-260 94-120 (371)
136 3pp8_A Glyoxylate/hydroxypyruv 21.0 4.5E+02 0.015 23.7 9.3 64 220-305 140-203 (315)
137 3h1g_A Chemotaxis protein CHEY 20.9 1.7E+02 0.0059 21.5 5.6 42 49-91 40-90 (129)
138 2vqe_B 30S ribosomal protein S 20.7 78 0.0027 28.1 3.8 31 60-90 157-189 (256)
139 3kht_A Response regulator; PSI 20.7 1.7E+02 0.0057 22.1 5.5 41 48-90 40-89 (144)
140 3lp6_A Phosphoribosylaminoimid 20.6 3.6E+02 0.012 22.2 11.2 142 221-389 8-158 (174)
141 3n0r_A Response regulator; sig 20.6 61 0.0021 29.0 3.2 41 49-91 195-242 (286)
142 3goc_A Endonuclease V; alpha-b 20.5 1.4E+02 0.0046 26.2 5.1 39 47-88 96-141 (237)
143 2qxy_A Response regulator; reg 20.5 1.2E+02 0.004 22.9 4.5 41 48-91 37-84 (142)
144 1vi6_A 30S ribosomal protein S 20.5 88 0.003 26.8 3.9 30 61-90 115-146 (208)
145 2q37_A OHCU decarboxylase; 2-O 20.5 1.2E+02 0.0042 25.3 4.7 55 328-386 118-172 (181)
146 4ds3_A Phosphoribosylglycinami 20.4 1.1E+02 0.0036 26.3 4.5 41 48-88 21-63 (209)
147 1jbe_A Chemotaxis protein CHEY 20.4 1.6E+02 0.0056 21.5 5.3 40 49-90 39-87 (128)
148 3hv2_A Response regulator/HD d 20.1 1.2E+02 0.004 23.4 4.5 41 48-90 47-94 (153)
149 1xhf_A DYE resistance, aerobic 20.1 1.5E+02 0.0052 21.4 5.1 41 49-91 37-83 (123)
150 3cz5_A Two-component response 20.1 1.9E+02 0.0066 22.0 5.9 42 48-91 40-88 (153)
151 1zgz_A Torcad operon transcrip 20.0 1.4E+02 0.0046 21.7 4.7 40 50-91 37-82 (122)
No 1
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=100.00 E-value=5.4e-66 Score=515.51 Aligned_cols=374 Identities=26% Similarity=0.450 Sum_probs=314.4
Q ss_pred CCCeEEEEcCCCCCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhc-CCCCccEEEECCCCCcHHHHHHHcCCCeEEEe
Q 045998 11 ESTVQFVFFPDGLSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSN-NDKKKSCIITNPFMPWVPDVAAEHKIPCAVLW 89 (408)
Q Consensus 11 ~~gi~f~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~-~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~ 89 (408)
.++|+|+++|||+|++.+.+.++..++..+.+.+.+.++++++++.+ .+.++||||+|.+++|+.++|+++|||++.||
T Consensus 66 ~~~i~~~~ipdglp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~iI~D~~~~w~~~vA~~lgIP~~~f~ 145 (454)
T 3hbf_A 66 LPNIKYYNVHDGLPKGYVSSGNPREPIFLFIKAMQENFKHVIDEAVAETGKNITCLVTDAFFWFGADLAEEMHAKWVPLW 145 (454)
T ss_dssp CTTEEEEECCCCCCTTCCCCSCTTHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEETTCTTHHHHHHHTTCEEEEEE
T ss_pred CCCceEEecCCCCCCCccccCChHHHHHHHHHHHHHHHHHHHHHHHhhcCCCCcEEEECCcchHHHHHHHHhCCCEEEEe
Confidence 46899999999999998766666666777777667777777777532 23579999999999999999999999999999
Q ss_pred cchhHHHHHHHHhhc--CCCCCCCCCCCCccc-cCCCCCCcccCCCCCCCC-Ch---------hHHhhhcccceEEccch
Q 045998 90 IQACAAYYIYYHYFK--HPQLFPSLENPNEAV-HLPAMPSLLVNELPSSLL-PS---------DFVQKLDKVKWILGSSF 156 (408)
Q Consensus 90 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~-~~---------~~~~~~~~~~~~lvnt~ 156 (408)
+++++.+..++++.. ...+.... ..+..+ .+||+|++..+++|+++. .. +..+.+.+++++++||+
T Consensus 146 t~~a~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~iPg~p~~~~~dlp~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ns~ 224 (454)
T 3hbf_A 146 TAGPHSLLTHVYTDLIREKTGSKEV-HDVKSIDVLPGFPELKASDLPEGVIKDIDVPFATMLHKMGLELPRANAVAINSF 224 (454)
T ss_dssp CSCHHHHHHHHTHHHHHHTCCHHHH-TTSSCBCCSTTSCCBCGGGSCTTSSSCTTSHHHHHHHHHHHHGGGSSCEEESSC
T ss_pred CccHHHHHHHHhhHHHHhhcCCCcc-ccccccccCCCCCCcChhhCchhhccCCchHHHHHHHHHHHhhccCCEEEECCh
Confidence 999999988877532 11110000 112233 389999899999998765 21 44556678999999999
Q ss_pred hhccHHHHHHhhccC-CceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcccCCH
Q 045998 157 YELEENVVASMATFT-PIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLSQ 235 (408)
Q Consensus 157 ~~le~~~~~~~~~~~-p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~ 235 (408)
++||+++++++++.. ++++|||+++.... .....+.+|+ +||+.+++++||||||||+...+.
T Consensus 225 ~eLE~~~~~~~~~~~~~v~~vGPl~~~~~~-----------~~~~~~~~~~-----~wLd~~~~~~vVyvsfGS~~~~~~ 288 (454)
T 3hbf_A 225 ATIHPLIENELNSKFKLLLNVGPFNLTTPQ-----------RKVSDEHGCL-----EWLDQHENSSVVYISFGSVVTPPP 288 (454)
T ss_dssp GGGCHHHHHHHHTTSSCEEECCCHHHHSCC-----------SCCCCTTCHH-----HHHHTSCTTCEEEEECCSSCCCCH
T ss_pred hHhCHHHHHHHHhcCCCEEEECCccccccc-----------ccccchHHHH-----HHHhcCCCCceEEEecCCCCcCCH
Confidence 999999999988764 59999999864210 0011224466 999999899999999999999899
Q ss_pred HHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcC
Q 045998 236 NQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAG 315 (408)
Q Consensus 236 ~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~G 315 (408)
+++.+++.+|++.+++|||+++..... .+|++|.++.++|+++++|+||.+||+|+++++|||||||||++|++++|
T Consensus 289 ~~~~el~~~l~~~~~~flw~~~~~~~~---~lp~~~~~~~~~~~~vv~w~Pq~~vL~h~~v~~fvtH~G~~S~~Eal~~G 365 (454)
T 3hbf_A 289 HELTALAESLEECGFPFIWSFRGDPKE---KLPKGFLERTKTKGKIVAWAPQVEILKHSSVGVFLTHSGWNSVLECIVGG 365 (454)
T ss_dssp HHHHHHHHHHHHHCCCEEEECCSCHHH---HSCTTHHHHTTTTEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhCCCeEEEEeCCcchh---cCCHhHHhhcCCceEEEeeCCHHHHHhhcCcCeEEecCCcchHHHHHHcC
Confidence 999999999999999999999876544 68899999999999999999999999999999999999999999999999
Q ss_pred CceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChH
Q 045998 316 VPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSD 395 (408)
Q Consensus 316 vP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~ 395 (408)
||||++|+++||+.||+++++.+|+|+.+.. +.+++++|.++|+++|+++++++||+||+++++.+++++++||||.
T Consensus 366 vP~i~~P~~~DQ~~Na~~v~~~~g~Gv~l~~---~~~~~~~l~~av~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gGsS~ 442 (454)
T 3hbf_A 366 VPMISRPFFGDQGLNTILTESVLEIGVGVDN---GVLTKESIKKALELTMSSEKGGIMRQKIVKLKESAFKAVEQNGTSA 442 (454)
T ss_dssp CCEEECCCSTTHHHHHHHHHTTSCSEEECGG---GSCCHHHHHHHHHHHHSSHHHHHHHHHHHHHHHHHHHHTSTTSHHH
T ss_pred CCEecCcccccHHHHHHHHHHhhCeeEEecC---CCCCHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHhhccCCCHH
Confidence 9999999999999999999985699999986 7899999999999999886667999999999999999999999999
Q ss_pred HHHHHHHHHHHh
Q 045998 396 ANINRFINEITR 407 (408)
Q Consensus 396 ~~~~~~v~~l~~ 407 (408)
+++++||++|.+
T Consensus 443 ~~l~~~v~~i~~ 454 (454)
T 3hbf_A 443 MDFTTLIQIVTS 454 (454)
T ss_dssp HHHHHHHHHHTC
T ss_pred HHHHHHHHHHhC
Confidence 999999999853
No 2
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=100.00 E-value=5.4e-58 Score=460.80 Aligned_cols=372 Identities=25% Similarity=0.466 Sum_probs=295.5
Q ss_pred CCeEEEEcCCCCCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhcC-CCCccEEEECCCCCcHHHHHHHcCCCeEEEec
Q 045998 12 STVQFVFFPDGLSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSNN-DKKKSCIITNPFMPWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 12 ~gi~f~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~-~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~ 90 (408)
.+|+|+++++++|++.+...++...+..|.+.+...++++++++.+. +.+|||||+|.++.|+..+|+++|||++.+++
T Consensus 62 ~~i~~~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~ 141 (456)
T 2c1x_A 62 CNIKSYDISDGVPEGYVFAGRPQEDIELFTRAAPESFRQGMVMAVAETGRPVSCLVADAFIWFAADMAAEMGVAWLPFWT 141 (456)
T ss_dssp TTEEEEECCCCCCTTCCCCCCTTHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCEEEEETTSTTHHHHHHHHTCEEEEEEC
T ss_pred CceEEEeCCCCCCCcccccCChHHHHHHHHHHhHHHHHHHHHHHHhccCCCceEEEECCchHhHHHHHHHhCCCEEEEeC
Confidence 58999999999998764333444555556555556677777665421 25899999999999999999999999999999
Q ss_pred chhHHHHHHHHhh---c--CCCCCCCCCCCCccc-cCCCCCCcccCCCCCCCCCh-----------hHHhhhcccceEEc
Q 045998 91 QACAAYYIYYHYF---K--HPQLFPSLENPNEAV-HLPAMPSLLVNELPSSLLPS-----------DFVQKLDKVKWILG 153 (408)
Q Consensus 91 ~~~~~~~~~~~~~---~--~~~~~~~~~~~~~~~-~~p~~~~~~~~~~~~~~~~~-----------~~~~~~~~~~~~lv 153 (408)
++++.+..+++.. . +.... .. .....+ .+|+++.+...+++.++... +..+.+.+++++++
T Consensus 142 ~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~pg~~~~~~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~~~vl~ 219 (456)
T 2c1x_A 142 AGPNSLSTHVYIDEIREKIGVSGI-QG-REDELLNFIPGMSKVRFRDLQEGIVFGNLNSLFSRMLHRMGQVLPKATAVFI 219 (456)
T ss_dssp SCHHHHHHHHTHHHHHHHHCSSCC-TT-CTTCBCTTSTTCTTCBGGGSCTTTSSSCTTSHHHHHHHHHHHHGGGSSCEEE
T ss_pred ccHHHHHHHhhhHHHHhccCCccc-cc-ccccccccCCCCCcccHHhCchhhcCCCcccHHHHHHHHHHHhhhhCCEEEE
Confidence 9887776554321 1 11110 00 111222 37888776777776544211 22234467899999
Q ss_pred cchhhccHHHHHHhhccC-CceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCccc
Q 045998 154 SSFYELEENVVASMATFT-PIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLV 232 (408)
Q Consensus 154 nt~~~le~~~~~~~~~~~-p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~ 232 (408)
||+++||++..+.+++.. ++++|||++...... . ...+.+|+ +||+.++++++|||||||+..
T Consensus 220 ns~~~le~~~~~~~~~~~~~~~~vGpl~~~~~~~----------~-~~~~~~~~-----~wl~~~~~~~vv~vs~GS~~~ 283 (456)
T 2c1x_A 220 NSFEELDDSLTNDLKSKLKTYLNIGPFNLITPPP----------V-VPNTTGCL-----QWLKERKPTSVVYISFGTVTT 283 (456)
T ss_dssp SSCGGGCHHHHHHHHHHSSCEEECCCHHHHC--------------------CHH-----HHHHTSCTTCEEEEECCSSCC
T ss_pred CChHHHhHHHHHHHHhcCCCEEEecCcccCcccc----------c-ccchhhHH-----HHHhcCCCcceEEEecCcccc
Confidence 999999999888887654 499999997542100 0 01123355 999998889999999999998
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHH
Q 045998 233 LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETV 312 (408)
Q Consensus 233 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal 312 (408)
.+.+++.+++.+|++.+++|||+++..... .+|+++.++.++|+++++|+||.++|+|+++++|||||||||++||+
T Consensus 284 ~~~~~~~~~~~~l~~~~~~~lw~~~~~~~~---~l~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~S~~Eal 360 (456)
T 2c1x_A 284 PPPAEVVALSEALEASRVPFIWSLRDKARV---HLPEGFLEKTRGYGMVVPWAPQAEVLAHEAVGAFVTHCGWNSLWESV 360 (456)
T ss_dssp CCHHHHHHHHHHHHHHTCCEEEECCGGGGG---GSCTTHHHHHTTTEEEESCCCHHHHHTSTTEEEEEECCCHHHHHHHH
T ss_pred CCHHHHHHHHHHHHhcCCeEEEEECCcchh---hCCHHHHhhcCCceEEecCCCHHHHhcCCcCCEEEecCCcchHHHHH
Confidence 888999999999999999999999875443 67888888888999999999999999999999999999999999999
Q ss_pred HcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCC
Q 045998 313 AAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGG 392 (408)
Q Consensus 313 ~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg 392 (408)
++|||||++|+++||+.||+++++.||+|+.+.. +.+++++|.++|+++|.++++++||+||+++++.+++++++||
T Consensus 361 ~~GvP~i~~P~~~dQ~~Na~~l~~~~g~g~~l~~---~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~~~~~~a~~~gG 437 (456)
T 2c1x_A 361 AGGVPLICRPFFGDQRLNGRMVEDVLEIGVRIEG---GVFTKSGLMSCFDQILSQEKGKKLRENLRALRETADRAVGPKG 437 (456)
T ss_dssp HHTCCEEECCCSTTHHHHHHHHHHTSCCEEECGG---GSCCHHHHHHHHHHHHHSHHHHHHHHHHHHHHHHHHHHTSTTC
T ss_pred HhCceEEecCChhhHHHHHHHHHHHhCeEEEecC---CCcCHHHHHHHHHHHHCCCcHHHHHHHHHHHHHHHHHhhhcCC
Confidence 9999999999999999999999984499999976 7899999999999999985556999999999999999999999
Q ss_pred ChHHHHHHHHHHHHh
Q 045998 393 SSDANINRFINEITR 407 (408)
Q Consensus 393 ~s~~~~~~~v~~l~~ 407 (408)
||.+++++||+++++
T Consensus 438 sS~~~l~~~v~~~~~ 452 (456)
T 2c1x_A 438 SSTENFITLVDLVSK 452 (456)
T ss_dssp HHHHHHHHHHHHHTS
T ss_pred cHHHHHHHHHHHHHh
Confidence 999999999999854
No 3
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=100.00 E-value=9e-57 Score=454.75 Aligned_cols=378 Identities=28% Similarity=0.484 Sum_probs=290.5
Q ss_pred CCeEEEEcCCCCCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCc-cEEEECCCCCcHHHHHHHcCCCeEEEec
Q 045998 12 STVQFVFFPDGLSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKK-SCIITNPFMPWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 12 ~gi~f~~i~~glp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~-D~vI~D~~~~~~~~vA~~lgIP~v~~~~ 90 (408)
.+|+|+++|++..++.....+....+......+.+.++++++++.+ ..++ ||||+|.++.|+..+|+++|||++.+++
T Consensus 61 ~~i~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~~~~-~~~~pd~vI~D~~~~~~~~vA~~lgiP~v~~~~ 139 (480)
T 2vch_A 61 SSISSVFLPPVDLTDLSSSTRIESRISLTVTRSNPELRKVFDSFVE-GGRLPTALVVDLFGTDAFDVAVEFHVPPYIFYP 139 (480)
T ss_dssp TTEEEEECCCCCCTTSCTTCCHHHHHHHHHHTTHHHHHHHHHHHHH-TTCCCSEEEECTTCGGGHHHHHHTTCCEEEEEC
T ss_pred CCceEEEcCCCCCCCCCCchhHHHHHHHHHHhhhHHHHHHHHHhcc-CCCCCeEEEECCcchhHHHHHHHcCCCEEEEEC
Confidence 6999999987532221111233333333445567788888888742 2478 9999999999999999999999999999
Q ss_pred chhHHHHHHHHhhcC--CCCCCCCCCCCccccCCCCCCcccCCCCCCCCCh---------hHHhhhcccceEEccchhhc
Q 045998 91 QACAAYYIYYHYFKH--PQLFPSLENPNEAVHLPAMPSLLVNELPSSLLPS---------DFVQKLDKVKWILGSSFYEL 159 (408)
Q Consensus 91 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~~lvnt~~~l 159 (408)
+++..+..++++... ....+.. +.+....+|+++++...+++..+... .....+.+++++++||++++
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~Pg~~p~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~nt~~el 218 (480)
T 2vch_A 140 TTANVLSFFLHLPKLDETVSCEFR-ELTEPLMLPGCVPVAGKDFLDPAQDRKDDAYKWLLHNTKRYKEAEGILVNTFFEL 218 (480)
T ss_dssp SCHHHHHHHHHHHHHHHHCCSCGG-GCSSCBCCTTCCCBCGGGSCGGGSCTTSHHHHHHHHHHHHGGGCSEEEESCCTTT
T ss_pred ccHHHHHHHHHHHHHHhcCCCccc-ccCCcccCCCCCCCChHHCchhhhcCCchHHHHHHHHHHhcccCCEEEEcCHHHH
Confidence 998877776554310 0011100 01112346777666666666544321 23344566788999999999
Q ss_pred cHHHHHHhhc----cCCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcccCCH
Q 045998 160 EENVVASMAT----FTPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLSQ 235 (408)
Q Consensus 160 e~~~~~~~~~----~~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~ 235 (408)
|++.+..+.+ .+++++|||++..... . . ....+.++.+||++++++++|||||||+...+.
T Consensus 219 e~~~~~~l~~~~~~~~~v~~vGpl~~~~~~----~------~-----~~~~~~~~~~wLd~~~~~~vvyvs~GS~~~~~~ 283 (480)
T 2vch_A 219 EPNAIKALQEPGLDKPPVYPVGPLVNIGKQ----E------A-----KQTEESECLKWLDNQPLGSVLYVSFGSGGTLTC 283 (480)
T ss_dssp SHHHHHHHHSCCTTCCCEEECCCCCCCSCS----C------C----------CHHHHHHHTSCTTCEEEEECTTTCCCCH
T ss_pred hHHHHHHHHhcccCCCcEEEEecccccccc----c------c-----CccchhHHHHHhcCCCCCceEEEecccccCCCH
Confidence 9998887763 2459999999764210 0 0 011234455999998889999999999998889
Q ss_pred HHHHHHHHHHHhCCCCEEEEEecCCc------------ccc-cccchhhhhhcCCCeEEEe-cccHHHHhcccCcceEEe
Q 045998 236 NQIDSIAAALINTKRPFLWVIRSQEN------------KEG-GVLRAGFLEETKDRGLVVK-WCSQEKVLMHAAVSCFLT 301 (408)
Q Consensus 236 ~~~~~~~~al~~~~~~~iw~~~~~~~------------~~~-~~lp~~~~~~~~~n~~v~~-w~pq~~lL~h~~v~~fit 301 (408)
+++.+++.+|++++++|||+++.... ... ..+|+++.+++.++++++. |+||.+||+|+++++|||
T Consensus 284 ~~~~~~~~al~~~~~~~lw~~~~~~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~g~~v~~w~Pq~~vL~h~~v~~fvt 363 (480)
T 2vch_A 284 EQLNELALGLADSEQRFLWVIRSPSGIANSSYFDSHSQTDPLTFLPPGFLERTKKRGFVIPFWAPQAQVLAHPSTGGFLT 363 (480)
T ss_dssp HHHHHHHHHHHHTTCEEEEEECCCCSSTTTTTTCC--CSCGGGGSCTTHHHHTTTTEEEEESCCCHHHHHHSTTEEEEEE
T ss_pred HHHHHHHHHHHhcCCcEEEEECCccccccccccccccccchhhhcCHHHHHHhCCCeEEEeCccCHHHHhCCCCcCeEEe
Confidence 99999999999999999999986531 111 2588899888888888886 999999999999999999
Q ss_pred ccCcchHHHHHHcCCceeeccCCCChhhhHHhh-hceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 045998 302 HCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLL-VDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAW 380 (408)
Q Consensus 302 HgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v-~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 380 (408)
||||||++||+++|||||+||+++||+.||+++ ++ +|+|+.+...+++.+++++|+++|+++|.++++++||+||+++
T Consensus 364 HgG~~S~~Eal~~GvP~i~~P~~~DQ~~na~~l~~~-~G~g~~l~~~~~~~~~~~~l~~av~~vl~~~~~~~~r~~a~~l 442 (480)
T 2vch_A 364 HCGWNSTLESVVSGIPLIAWPLYAEQKMNAVLLSED-IRAALRPRAGDDGLVRREEVARVVKGLMEGEEGKGVRNKMKEL 442 (480)
T ss_dssp CCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT-TCCEECCCCCTTSCCCHHHHHHHHHHHHTSTHHHHHHHHHHHH
T ss_pred cccchhHHHHHHcCCCEEeccccccchHHHHHHHHH-hCeEEEeecccCCccCHHHHHHHHHHHhcCcchHHHHHHHHHH
Confidence 999999999999999999999999999999997 56 9999999752223799999999999999866668999999999
Q ss_pred HHHHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 381 KEAAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 381 ~~~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
++.+++++++||+|.+++++||+++++
T Consensus 443 ~~~~~~a~~~gGss~~~~~~~v~~~~~ 469 (480)
T 2vch_A 443 KEAACRVLKDDGTSTKALSLVALKWKA 469 (480)
T ss_dssp HHHHHHHTSTTSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHhcCCCHHHHHHHHHHHHHH
Confidence 999999999999999999999999863
No 4
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=100.00 E-value=1.1e-57 Score=462.18 Aligned_cols=386 Identities=28% Similarity=0.553 Sum_probs=293.1
Q ss_pred CCeEEEEcCCCCCCCc---ccccCHHHHHHHHHHHhhHHHHHHHHHhhcC--CCCccEEEECCCCCcHHHHHHHcCCCeE
Q 045998 12 STVQFVFFPDGLSDDF---DRIKYVGAFIESLQKVGSKNLSSIINNLSNN--DKKKSCIITNPFMPWVPDVAAEHKIPCA 86 (408)
Q Consensus 12 ~gi~f~~i~~glp~~~---~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~--~~~~D~vI~D~~~~~~~~vA~~lgIP~v 86 (408)
++|+|+++|+++|+.. ....+...++..+...+.+.++++++.+... ..+|||||+|.++.|+..+|+++|||++
T Consensus 64 ~~i~~~~l~~~lp~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~~~d~vI~D~~~~~~~~vA~~lgiP~v 143 (482)
T 2pq6_A 64 TDFNFESIPDGLTPMEGDGDVSQDVPTLCQSVRKNFLKPYCELLTRLNHSTNVPPVTCLVSDCCMSFTIQAAEEFELPNV 143 (482)
T ss_dssp -CEEEEEECCCCC---------CCHHHHHHHHTTSSHHHHHHHHHHHHTCSSSCCCCEEEEETTCTHHHHHHHHTTCCEE
T ss_pred CceEEEECCCCCCCcccccCcchhHHHHHHHHHHHhhHHHHHHHHHHhhhccCCCceEEEECCcchhHHHHHHHcCCCEE
Confidence 4899999999998731 1124455556655566788899999988642 3589999999999999999999999999
Q ss_pred EEecchhHHHHHHHHhh----cCCCCCCCCC---C--CCccc-cCCCCCCcccCCCCCCCCCh-----------hHHhhh
Q 045998 87 VLWIQACAAYYIYYHYF----KHPQLFPSLE---N--PNEAV-HLPAMPSLLVNELPSSLLPS-----------DFVQKL 145 (408)
Q Consensus 87 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~---~--~~~~~-~~p~~~~~~~~~~~~~~~~~-----------~~~~~~ 145 (408)
.++++++..+..++++. .+..+..... + .+... .+|+++.+...+++.++... ...+..
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 223 (482)
T 2pq6_A 144 LYFSSSACSLLNVMHFRSFVERGIIPFKDESYLTNGCLETKVDWIPGLKNFRLKDIVDFIRTTNPNDIMLEFFIEVADRV 223 (482)
T ss_dssp EEECSCHHHHHHHTTHHHHHHTTCSSCSSGGGGTSSGGGCBCCSSTTCCSCBGGGSCGGGCCSCTTCHHHHHHHHHHHTC
T ss_pred EEecccHHHHHHHHHHHHHHhcCCCCCccccccccccccCccccCCCCCCCchHHCchhhccCCcccHHHHHHHHHHHhh
Confidence 99999987776654332 1222211100 0 01111 35677656666666554321 223345
Q ss_pred cccceEEccchhhccHHHHHHhhcc-CCceeeCCCCCc-cccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceE
Q 045998 146 DKVKWILGSSFYELEENVVASMATF-TPIIPVGPLVSP-FMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVI 223 (408)
Q Consensus 146 ~~~~~~lvnt~~~le~~~~~~~~~~-~p~~~vGpl~~~-~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vv 223 (408)
.+++++++||+++||+++++.+++. +++++|||++.. ........+...+..++.++.+|. +||++++++++|
T Consensus 224 ~~~~~vl~nt~~~le~~~~~~~~~~~~~v~~VGPl~~~~~~~~~~~~~~~~~~~l~~~~~~~~-----~wld~~~~~~vv 298 (482)
T 2pq6_A 224 NKDTTILLNTFNELESDVINALSSTIPSIYPIGPLPSLLKQTPQIHQLDSLDSNLWKEDTECL-----DWLESKEPGSVV 298 (482)
T ss_dssp CTTCCEEESSCGGGGHHHHHHHHTTCTTEEECCCHHHHHHTSTTGGGGCC---------CHHH-----HHHTTSCTTCEE
T ss_pred ccCCEEEEcChHHHhHHHHHHHHHhCCcEEEEcCCcccccccccccccccccccccccchHHH-----HHHhcCCCCceE
Confidence 5789999999999999998888865 459999999763 110000000000011222223344 999998888999
Q ss_pred EEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcc-cccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEec
Q 045998 224 YISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENK-EGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTH 302 (408)
Q Consensus 224 yvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~-~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitH 302 (408)
||||||+...+.+++.+++.+|++.+++|||+++..... ....+|+++.++.++|+++++|+||.++|+|+++++||||
T Consensus 299 ~vs~GS~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~~~pq~~~L~h~~~~~~vth 378 (482)
T 2pq6_A 299 YVNFGSTTVMTPEQLLEFAWGLANCKKSFLWIIRPDLVIGGSVIFSSEFTNEIADRGLIASWCPQDKVLNHPSIGGFLTH 378 (482)
T ss_dssp EEECCSSSCCCHHHHHHHHHHHHHTTCEEEEECCGGGSTTTGGGSCHHHHHHHTTTEEEESCCCHHHHHTSTTEEEEEEC
T ss_pred EEecCCcccCCHHHHHHHHHHHHhcCCcEEEEEcCCccccccccCcHhHHHhcCCCEEEEeecCHHHHhcCCCCCEEEec
Confidence 999999988888899999999999999999999864211 0113788888888999999999999999999999999999
Q ss_pred cCcchHHHHHHcCCceeeccCCCChhhhHHhhh-ceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHH
Q 045998 303 CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLV-DVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWK 381 (408)
Q Consensus 303 gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~-~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~ 381 (408)
|||||++||+++|||||++|+++||+.||++++ + +|+|+.+. ..+++++|.++|+++|.++++++||+||++++
T Consensus 379 ~G~~s~~Eal~~GvP~i~~P~~~dQ~~na~~~~~~-~G~g~~l~----~~~~~~~l~~~i~~ll~~~~~~~~r~~a~~l~ 453 (482)
T 2pq6_A 379 CGWNSTTESICAGVPMLCWPFFADQPTDCRFICNE-WEIGMEID----TNVKREELAKLINEVIAGDKGKKMKQKAMELK 453 (482)
T ss_dssp CCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHHT-SCCEEECC----SSCCHHHHHHHHHHHHTSHHHHHHHHHHHHHH
T ss_pred CCcchHHHHHHcCCCEEecCcccchHHHHHHHHHH-hCEEEEEC----CCCCHHHHHHHHHHHHcCCcHHHHHHHHHHHH
Confidence 999999999999999999999999999999997 6 99999996 36999999999999999854558999999999
Q ss_pred HHHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 382 EAAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 382 ~~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
+.+++++++||||.+++++||++|++
T Consensus 454 ~~~~~a~~~gGss~~~l~~~v~~~~~ 479 (482)
T 2pq6_A 454 KKAEENTRPGGCSYMNLNKVIKDVLL 479 (482)
T ss_dssp HHHHHHTSTTCHHHHHHHHHHHHTTC
T ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHh
Confidence 99999999999999999999999854
No 5
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=100.00 E-value=5e-55 Score=440.20 Aligned_cols=372 Identities=23% Similarity=0.443 Sum_probs=288.1
Q ss_pred CCeEEEEcCCC-CCCCcccccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEec
Q 045998 12 STVQFVFFPDG-LSDDFDRIKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 12 ~gi~f~~i~~g-lp~~~~~~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~ 90 (408)
.+|+|+++|++ +|+ .+...+....+......+.+.++++++++ ...+|||||+|.++.|+..+|+++|||++.+++
T Consensus 67 ~~i~~~~lp~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ll~~~--~~~~~d~vI~D~~~~~~~~vA~~lgiP~v~~~~ 143 (463)
T 2acv_A 67 PQIQLIDLPEVEPPP-QELLKSPEFYILTFLESLIPHVKATIKTI--LSNKVVGLVLDFFCVSMIDVGNEFGIPSYLFLT 143 (463)
T ss_dssp TTEEEEECCCCCCCC-GGGGGSHHHHHHHHHHHTHHHHHHHHHHH--CCTTEEEEEEEGGGGGGHHHHHHTTCCEEEEES
T ss_pred CCceEEECCCCCCCc-ccccCCccHHHHHHHHhhhHHHHHHHHhc--cCCCCeEEEECCcchhHHHHHHHcCCCEEEEeC
Confidence 69999999986 443 22122222223333456677888888887 235899999999999999999999999999999
Q ss_pred chhHHHHHHHHhhcCCCCCCCCCCCCc---cccCCCC-CCcccCCCCCCCC-C--h-----hHHhhhcccceEEccchhh
Q 045998 91 QACAAYYIYYHYFKHPQLFPSLENPNE---AVHLPAM-PSLLVNELPSSLL-P--S-----DFVQKLDKVKWILGSSFYE 158 (408)
Q Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~p~~-~~~~~~~~~~~~~-~--~-----~~~~~~~~~~~~lvnt~~~ 158 (408)
+++..+..++++.......+.. ..+. ...+|++ +++...+++.++. + . .....+.+++.+++||+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~pg~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~l~nt~~e 222 (463)
T 2acv_A 144 SNVGFLSLMLSLKNRQIEEVFD-DSDRDHQLLNIPGISNQVPSNVLPDACFNKDGGYIAYYKLAERFRDTKGIIVNTFSD 222 (463)
T ss_dssp SCHHHHHHHHHGGGSCTTCCCC-CSSGGGCEECCTTCSSCEEGGGSCHHHHCTTTHHHHHHHHHHHHTTSSEEEESCCHH
T ss_pred chHHHHHHHHHHHhhcccCCCC-CccccCceeECCCCCCCCChHHCchhhcCCchHHHHHHHHHHhcccCCEEEECCHHH
Confidence 9998887776664322111111 1111 3457887 6666655553221 1 1 2334456788999999999
Q ss_pred ccHHHHHHhhc----cCCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcc-cC
Q 045998 159 LEENVVASMAT----FTPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLL-VL 233 (408)
Q Consensus 159 le~~~~~~~~~----~~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~-~~ 233 (408)
||++..+++++ .+++++|||++.... . .. . + .....+.++.+||+.++++++|||||||+. .+
T Consensus 223 le~~~~~~l~~~~~p~~~v~~vGpl~~~~~-~----~~-----~-~-~~~~~~~~~~~wl~~~~~~~vv~vs~GS~~~~~ 290 (463)
T 2acv_A 223 LEQSSIDALYDHDEKIPPIYAVGPLLDLKG-Q----PN-----P-K-LDQAQHDLILKWLDEQPDKSVVFLCFGSMGVSF 290 (463)
T ss_dssp HHHHHHHHHHHHCTTSCCEEECCCCCCSSC-C----CB-----T-T-BCHHHHHHHHHHHHTSCTTCEEEEECCSSCCCC
T ss_pred HhHHHHHHHHhccccCCcEEEeCCCccccc-c----cc-----c-c-cccccchhHHHHHhcCCCCceEEEEeccccccC
Confidence 99999888765 345999999976420 0 00 0 0 000124455699999888999999999999 88
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhc--CCCeEEEecccHHHHhcccCcceEEeccCcchHHHH
Q 045998 234 SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEET--KDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLET 311 (408)
Q Consensus 234 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~--~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~ea 311 (408)
+.+++.+++.+|++.+++|||+++.+ .. .+|+++.++. ++|+++++|+||.++|+|+++++|||||||||++||
T Consensus 291 ~~~~~~~~~~~l~~~~~~~l~~~~~~-~~---~l~~~~~~~~~~~~~~~v~~w~pq~~vL~h~~~~~fvth~G~~s~~Ea 366 (463)
T 2acv_A 291 GPSQIREIALGLKHSGVRFLWSNSAE-KK---VFPEGFLEWMELEGKGMICGWAPQVEVLAHKAIGGFVSHCGWNSILES 366 (463)
T ss_dssp CHHHHHHHHHHHHHHTCEEEEECCCC-GG---GSCTTHHHHHHHHCSEEEESSCCHHHHHHSTTEEEEEECCCHHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCcEEEEECCC-cc---cCChhHHHhhccCCCEEEEccCCHHHHhCCCccCeEEecCCchhHHHH
Confidence 88999999999999999999999874 12 4678887777 789999999999999999999999999999999999
Q ss_pred HHcCCceeeccCCCChhhhHHhh-hceeeeEEEe-ecCCCC--CcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 045998 312 VAAGVPVIAYPEWTDQPTDAKLL-VDVFKIGVRM-RNEEDG--TLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKA 387 (408)
Q Consensus 312 l~~GvP~i~~P~~~DQ~~na~~v-~~~~g~G~~l-~~~~~~--~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a 387 (408)
+++|||||++|+++||+.||+++ ++ +|+|+.+ ...+++ .++.++|.++|+++|++ +++||+||+++++.++++
T Consensus 367 l~~GvP~i~~P~~~dQ~~Na~~lv~~-~g~g~~l~~~~~~~~~~~~~~~l~~ai~~ll~~--~~~~r~~a~~l~~~~~~a 443 (463)
T 2acv_A 367 MWFGVPILTWPIYAEQQLNAFRLVKE-WGVGLGLRVDYRKGSDVVAAEEIEKGLKDLMDK--DSIVHKKVQEMKEMSRNA 443 (463)
T ss_dssp HHTTCCEEECCCSTTHHHHHHHHHHT-SCCEEESCSSCCTTCCCCCHHHHHHHHHHHTCT--TCTHHHHHHHHHHHHHHH
T ss_pred HHcCCCeeeccchhhhHHHHHHHHHH-cCeEEEEecccCCCCccccHHHHHHHHHHHHhc--cHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999995 77 9999999 321124 79999999999999963 268999999999999999
Q ss_pred HhcCCChHHHHHHHHHHHH
Q 045998 388 LEDGGSSDANINRFINEIT 406 (408)
Q Consensus 388 ~~~gg~s~~~~~~~v~~l~ 406 (408)
+++||||.+++++||++++
T Consensus 444 ~~~gGss~~~l~~~v~~~~ 462 (463)
T 2acv_A 444 VVDGGSSLISVGKLIDDIT 462 (463)
T ss_dssp TSTTSHHHHHHHHHHHHHH
T ss_pred HhcCCcHHHHHHHHHHHhc
Confidence 9999999999999999985
No 6
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=100.00 E-value=3.1e-35 Score=292.69 Aligned_cols=344 Identities=14% Similarity=0.167 Sum_probs=229.9
Q ss_pred CCCCCCeEEEEcCCCCCCCccc----ccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCC
Q 045998 8 RITESTVQFVFFPDGLSDDFDR----IKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKI 83 (408)
Q Consensus 8 ~i~~~gi~f~~i~~glp~~~~~----~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgI 83 (408)
.++..|++|++++++++.+... ..+...++..+...+...++++.+.+.+ .+|||||+|.++.|+..+|+++||
T Consensus 54 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~VI~d~~~~~~~~~A~~lgI 131 (424)
T 2iya_A 54 QVKAAGATPVVYDSILPKESNPEESWPEDQESAMGLFLDEAVRVLPQLEDAYAD--DRPDLIVYDIASWPAPVLGRKWDI 131 (424)
T ss_dssp HHHHHTCEEEECCCCSCCTTCTTCCCCSSHHHHHHHHHHHHHHHHHHHHHHTTT--SCCSEEEEETTCTHHHHHHHHHTC
T ss_pred HHHhCCCEEEecCccccccccchhhcchhHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEEcCcccHHHHHHHhcCC
Confidence 3455789999998777654321 1244444444444333444555555443 589999999988999999999999
Q ss_pred CeEEEecchhHHHHHHHHhhcCCCCCC---------CC-CCCCcccc-CCCCCCcccCCCCCCCCC----hhHHhhhccc
Q 045998 84 PCAVLWIQACAAYYIYYHYFKHPQLFP---------SL-ENPNEAVH-LPAMPSLLVNELPSSLLP----SDFVQKLDKV 148 (408)
Q Consensus 84 P~v~~~~~~~~~~~~~~~~~~~~~~~~---------~~-~~~~~~~~-~p~~~~~~~~~~~~~~~~----~~~~~~~~~~ 148 (408)
|++.+++.++........+.....+.. .. ........ .|....+. ..+..+..+ .........+
T Consensus 132 P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~g~~~~~~~~~~~~ 210 (424)
T 2iya_A 132 PFVQLSPTFVAYEGFEEDVPAVQDPTADRGEEAAAPAGTGDAEEGAEAEDGLVRFF-TRLSAFLEEHGVDTPATEFLIAP 210 (424)
T ss_dssp CEEEEESSCCCCTTHHHHSGGGSCCCC---------------------HHHHHHHH-HHHHHHHHHTTCCSCHHHHHHCC
T ss_pred CEEEEecccccccccccccccccccccccccccccccccccchhhhccchhHHHHH-HHHHHHHHHcCCCCCHHHhccCC
Confidence 999998766421111100000000000 00 00000000 00000000 000000000 0001111246
Q ss_pred ceEEccchhhccHHHHHHhhcc-CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEec
Q 045998 149 KWILGSSFYELEENVVASMATF-TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISF 227 (408)
Q Consensus 149 ~~~lvnt~~~le~~~~~~~~~~-~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~ 227 (408)
+.+++|++++|+++. +.. .++++|||++... .... +|++..+++++|||+|
T Consensus 211 ~~~l~~~~~~l~~~~----~~~~~~~~~vGp~~~~~-------------------~~~~-----~~~~~~~~~~~v~v~~ 262 (424)
T 2iya_A 211 NRCIVALPRTFQIKG----DTVGDNYTFVGPTYGDR-------------------SHQG-----TWEGPGDGRPVLLIAL 262 (424)
T ss_dssp SSEEESSCTTTSTTG----GGCCTTEEECCCCCCCC-------------------GGGC-----CCCCCCSSCCEEEEEC
T ss_pred CcEEEEcchhhCCCc----cCCCCCEEEeCCCCCCc-------------------ccCC-----CCCccCCCCCEEEEEc
Confidence 789999999998753 122 2399999975421 0112 6777666778999999
Q ss_pred CCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcch
Q 045998 228 GSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNS 307 (408)
Q Consensus 228 GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s 307 (408)
||......+.+.+++++|++.+++++|+++..... +.+ +..++|+++.+|+||.++|+|+++ ||||||+||
T Consensus 263 Gs~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~------~~~-~~~~~~v~~~~~~~~~~~l~~~d~--~v~~~G~~t 333 (424)
T 2iya_A 263 GSAFTDHLDFYRTCLSAVDGLDWHVVLSVGRFVDP------ADL-GEVPPNVEVHQWVPQLDILTKASA--FITHAGMGS 333 (424)
T ss_dssp CSSSCCCHHHHHHHHHHHTTCSSEEEEECCTTSCG------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHH
T ss_pred CCCCcchHHHHHHHHHHHhcCCcEEEEEECCcCCh------HHh-ccCCCCeEEecCCCHHHHHhhCCE--EEECCchhH
Confidence 99986677889999999999899999998864321 111 134589999999999999999998 999999999
Q ss_pred HHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHH
Q 045998 308 TLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKA 387 (408)
Q Consensus 308 ~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a 387 (408)
++||+++|||+|++|.+.||+.||+++++ +|+|+.+.. ..++.++|.++|+++|+| ++||++++++++.+++
T Consensus 334 ~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~- 405 (424)
T 2iya_A 334 TMEALSNAVPMVAVPQIAEQTMNAERIVE-LGLGRHIPR---DQVTAEKLREAVLAVASD---PGVAERLAAVRQEIRE- 405 (424)
T ss_dssp HHHHHHTTCCEEECCCSHHHHHHHHHHHH-TTSEEECCG---GGCCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHT-
T ss_pred HHHHHHcCCCEEEecCccchHHHHHHHHH-CCCEEEcCc---CCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh-
Confidence 99999999999999999999999999998 999999976 678999999999999998 7899999999998754
Q ss_pred HhcCCChHHHHHHHH
Q 045998 388 LEDGGSSDANINRFI 402 (408)
Q Consensus 388 ~~~gg~s~~~~~~~v 402 (408)
.+++.+..+.+.
T Consensus 406 ---~~~~~~~~~~i~ 417 (424)
T 2iya_A 406 ---AGGARAAADILE 417 (424)
T ss_dssp ---SCHHHHHHHHHH
T ss_pred ---cCcHHHHHHHHH
Confidence 244454444433
No 7
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=3.2e-33 Score=277.56 Aligned_cols=313 Identities=15% Similarity=0.129 Sum_probs=205.4
Q ss_pred CCCCCeEEEEcCCCCCCCccc-ccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECC-CCCc--HHHHHHHcCCC
Q 045998 9 ITESTVQFVFFPDGLSDDFDR-IKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNP-FMPW--VPDVAAEHKIP 84 (408)
Q Consensus 9 i~~~gi~f~~i~~glp~~~~~-~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~-~~~~--~~~vA~~lgIP 84 (408)
++..|++|+++++...+.... ..+....+..+ +...+..+++++.+...+||+||+|. +..| +..+|+++|||
T Consensus 43 v~~~g~~~~~i~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~lgiP 119 (415)
T 1iir_A 43 LAEVGVPHVPVGPSARAPIQRAKPLTAEDVRRF---TTEAIATQFDEIPAAAEGCAAVVTTGLLAAAIGVRSVAEKLGIP 119 (415)
T ss_dssp HHHTTCCEEECCC-------CCSCCCHHHHHHH---HHHHHHHHHHHHHHHTTTCSEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred HHHcCCeeeeCCCCHHHHhhcccccchHHHHHH---HHHHHHHHHHHHHHHhcCCCEEEECChhHhHhhHHHHHHHhCCC
Confidence 445789999998653222111 11111112222 12223444444432125899999998 5678 89999999999
Q ss_pred eEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCCcccCCCCCC-CC--------Ch--------------hH
Q 045998 85 CAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPSLLVNELPSS-LL--------PS--------------DF 141 (408)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~-~~--------~~--------------~~ 141 (408)
++.++++++.... .. .|.. .....+|+ ......+... .. .. ..
T Consensus 120 ~v~~~~~~~~~~~-------~~--~p~~---~~~~~~~~--~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 185 (415)
T 1iir_A 120 YFYAFHCPSYVPS-------PY--YPPP---PLGEPSTQ--DTIDIPAQWERNNQSAYQRYGGLLNSHRDAIGLPPVEDI 185 (415)
T ss_dssp EEEEESSGGGSCC-------SS--SCCC---C-----------CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCCH
T ss_pred EEEEecCCCcCCC-------cc--cCCc---cCCccccc--hHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCCCcc
Confidence 9999876643110 00 0000 00000100 0000000000 00 00 01
Q ss_pred HhhhcccceEEccchhhccH-HHHHHhhccCCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCC
Q 045998 142 VQKLDKVKWILGSSFYELEE-NVVASMATFTPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPS 220 (408)
Q Consensus 142 ~~~~~~~~~~lvnt~~~le~-~~~~~~~~~~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~ 220 (408)
.+..... .+++|+++.|++ +. ...++++|||++... ....+.++.+||+++ +
T Consensus 186 ~~~~~~~-~~l~~~~~~l~~~~~-----~~~~~~~vG~~~~~~-------------------~~~~~~~~~~~l~~~--~ 238 (415)
T 1iir_A 186 FTFGYTD-HPWVAADPVLAPLQP-----TDLDAVQTGAWILPD-------------------ERPLSPELAAFLDAG--P 238 (415)
T ss_dssp HHHHHCS-SCEECSCTTTSCCCC-----CSSCCEECCCCCCCC-------------------CCCCCHHHHHHHHTS--S
T ss_pred ccccCCC-CEEEeeChhhcCCCc-----ccCCeEeeCCCccCc-------------------ccCCCHHHHHHHhhC--C
Confidence 1111222 678999998876 31 111589999986531 012345666999875 3
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEE
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFL 300 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fi 300 (408)
++|||+|||+. ...+.++.++++|++.+.+++|+++..... . ...++|+++.+|+||.++|+++++ ||
T Consensus 239 ~~v~v~~Gs~~-~~~~~~~~~~~al~~~~~~~v~~~g~~~~~----~-----~~~~~~v~~~~~~~~~~~l~~~d~--~v 306 (415)
T 1iir_A 239 PPVYLGFGSLG-APADAVRVAIDAIRAHGRRVILSRGWADLV----L-----PDDGADCFAIGEVNHQVLFGRVAA--VI 306 (415)
T ss_dssp CCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTCC----C-----SSCGGGEEECSSCCHHHHGGGSSE--EE
T ss_pred CeEEEeCCCCC-CcHHHHHHHHHHHHHCCCeEEEEeCCCccc----c-----cCCCCCEEEeCcCChHHHHhhCCE--EE
Confidence 78999999997 677888899999999999999998765321 1 123478999999999999988888 99
Q ss_pred eccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 045998 301 THCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAW 380 (408)
Q Consensus 301 tHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 380 (408)
||||+||++||+++|||+|++|.++||..||+++++ +|+|+.+.. ..++.++|.++|+++ .| ++|+++++++
T Consensus 307 ~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~---~~~~~~~~~~ 378 (415)
T 1iir_A 307 HHGGAGTTHVAARAGAPQILLPQMADQPYYAGRVAE-LGVGVAHDG---PIPTFDSLSAALATA-LT---PETHARATAV 378 (415)
T ss_dssp ECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHH-TS---HHHHHHHHHH
T ss_pred eCCChhHHHHHHHcCCCEEECCCCCccHHHHHHHHH-CCCcccCCc---CCCCHHHHHHHHHHH-cC---HHHHHHHHHH
Confidence 999999999999999999999999999999999998 999999976 678999999999999 87 8999999999
Q ss_pred HHHHH
Q 045998 381 KEAAK 385 (408)
Q Consensus 381 ~~~~~ 385 (408)
++.++
T Consensus 379 ~~~~~ 383 (415)
T 1iir_A 379 AGTIR 383 (415)
T ss_dssp HHHSC
T ss_pred HHHHh
Confidence 98874
No 8
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=100.00 E-value=8.5e-33 Score=274.53 Aligned_cols=312 Identities=16% Similarity=0.085 Sum_probs=209.6
Q ss_pred CCCCCeEEEEcCCCCCCCccc-c-cCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCC-CCc--HHHHHHHcCC
Q 045998 9 ITESTVQFVFFPDGLSDDFDR-I-KYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPF-MPW--VPDVAAEHKI 83 (408)
Q Consensus 9 i~~~gi~f~~i~~glp~~~~~-~-~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~-~~~--~~~vA~~lgI 83 (408)
++..|++|++++....+.... . ......+..+. ...+..+++.+.+...+||+||+|.+ .+| +..+|+.+||
T Consensus 43 v~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~l~~~~~~pD~vi~d~~~~~~~~~~~~A~~~gi 119 (416)
T 1rrv_A 43 LAEVGVPHVPVGLPQHMMLQEGMPPPPPEEEQRLA---AMTVEMQFDAVPGAAEGCAAVVAVGDLAAATGVRSVAEKLGL 119 (416)
T ss_dssp HHHHTCCEEECSCCGGGCCCTTSCCCCHHHHHHHH---HHHHHHHHHHHHHHTTTCSEEEEEECHHHHHHHHHHHHHHTC
T ss_pred HHHcCCeeeecCCCHHHHHhhccccchhHHHHHHH---HHHHHHHHHHHHHHhcCCCEEEEcCchHHHHHHHHHHHHcCC
Confidence 455789999987543211110 1 11111122221 12234444444311258999999974 467 8999999999
Q ss_pred CeEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccC-CC-CCC-cc------------------c---CCCCCCCCCh
Q 045998 84 PCAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHL-PA-MPS-LL------------------V---NELPSSLLPS 139 (408)
Q Consensus 84 P~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-p~-~~~-~~------------------~---~~~~~~~~~~ 139 (408)
|++.+++.+..... ... + +.. + .+. ++ ... +. . -.++.. .
T Consensus 120 P~v~~~~~~~~~~~------~~~-p-~~~--~---~~~~~~r~~n~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~-- 183 (416)
T 1rrv_A 120 PFFYSVPSPVYLAS------PHL-P-PAY--D---EPTTPGVTDIRVLWEERAARFADRYGPTLNRRRAEIGLPPV-E-- 183 (416)
T ss_dssp CEEEEESSGGGSCC------SSS-C-CCB--C---SCCCTTCCCHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCC-S--
T ss_pred CEEEEeCCCCCCCC------ccc-C-CCC--C---CCCCchHHHHHHHHHHHHHHHHHHhHHHHHHHHHHcCCCCC-C--
Confidence 99998776532100 000 0 000 0 000 11 000 00 0 000000 0
Q ss_pred hHHhhhcccceEEccchhhccHHHHHHhhccCCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCC
Q 045998 140 DFVQKLDKVKWILGSSFYELEENVVASMATFTPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPP 219 (408)
Q Consensus 140 ~~~~~~~~~~~~lvnt~~~le~~~~~~~~~~~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~ 219 (408)
...+..... .+++|++++|+++. ...++++|||+.... ....|.++.+|++++
T Consensus 184 ~~~~~~~~~-~~l~~~~~~l~~~~-----~~~~~~~vG~~~~~~-------------------~~~~~~~~~~~l~~~-- 236 (416)
T 1rrv_A 184 DVFGYGHGE-RPLLAADPVLAPLQ-----PDVDAVQTGAWLLSD-------------------ERPLPPELEAFLAAG-- 236 (416)
T ss_dssp CHHHHTTCS-SCEECSCTTTSCCC-----SSCCCEECCCCCCCC-------------------CCCCCHHHHHHHHSS--
T ss_pred chhhhccCC-CeEEccCccccCCC-----CCCCeeeECCCccCc-------------------cCCCCHHHHHHHhcC--
Confidence 011112233 68899999887542 112589999986541 011345667999875
Q ss_pred CceEEEecCCccc-CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcce
Q 045998 220 SSVIYISFGSLLV-LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSC 298 (408)
Q Consensus 220 ~~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~ 298 (408)
+++|||+|||+.. ...+.+.+++++|++.+++|+|+++..+.. + ...++|+.+.+|+||.++|+++++
T Consensus 237 ~~~v~v~~Gs~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~----~-----~~~~~~v~~~~~~~~~~ll~~~d~-- 305 (416)
T 1rrv_A 237 SPPVHIGFGSSSGRGIADAAKVAVEAIRAQGRRVILSRGWTELV----L-----PDDRDDCFAIDEVNFQALFRRVAA-- 305 (416)
T ss_dssp SCCEEECCTTCCSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCC----C-----SCCCTTEEEESSCCHHHHGGGSSE--
T ss_pred CCeEEEecCCCCccChHHHHHHHHHHHHHCCCeEEEEeCCcccc----c-----cCCCCCEEEeccCChHHHhccCCE--
Confidence 3789999999874 456778899999999999999998865321 1 134589999999999999988888
Q ss_pred EEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHH
Q 045998 299 FLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAV 378 (408)
Q Consensus 299 fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~ 378 (408)
||||||+||++||+++|||+|++|.+.||+.||+++++ .|+|+.+.. ..++.++|.++|+++ .| ++|+++++
T Consensus 306 ~v~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~l-~~---~~~~~~~~ 377 (416)
T 1rrv_A 306 VIHHGSAGTEHVATRAGVPQLVIPRNTDQPYFAGRVAA-LGIGVAHDG---PTPTFESLSAALTTV-LA---PETRARAE 377 (416)
T ss_dssp EEECCCHHHHHHHHHHTCCEEECCCSBTHHHHHHHHHH-HTSEEECSS---SCCCHHHHHHHHHHH-TS---HHHHHHHH
T ss_pred EEecCChhHHHHHHHcCCCEEEccCCCCcHHHHHHHHH-CCCccCCCC---CCCCHHHHHHHHHHh-hC---HHHHHHHH
Confidence 99999999999999999999999999999999999998 999999875 678999999999999 87 89999999
Q ss_pred HHHHHHH
Q 045998 379 AWKEAAK 385 (408)
Q Consensus 379 ~l~~~~~ 385 (408)
++++.++
T Consensus 378 ~~~~~~~ 384 (416)
T 1rrv_A 378 AVAGMVL 384 (416)
T ss_dssp HHTTTCC
T ss_pred HHHHHHh
Confidence 9988765
No 9
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=100.00 E-value=1.5e-32 Score=270.65 Aligned_cols=154 Identities=20% Similarity=0.330 Sum_probs=130.7
Q ss_pred hhhccCCCCceEEEecCCcccCC--HHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHH
Q 045998 212 QWLNKKPPSSVIYISFGSLLVLS--QNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEK 289 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~~~~--~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~ 289 (408)
+|++..+++++|||||||+.... .+.+.++++++++.+.+++|..+........ ..++|+++.+|+||.+
T Consensus 229 ~~l~~~~~~~~v~vs~Gs~~~~~~~~~~~~~~~~~l~~~~~~~v~~~~~~~~~~~~--------~~~~~v~~~~~~p~~~ 300 (400)
T 4amg_A 229 DWLPPAAGRRRIAVTLGSIDALSGGIAKLAPLFSEVADVDAEFVLTLGGGDLALLG--------ELPANVRVVEWIPLGA 300 (400)
T ss_dssp TTCSCCTTCCEEEECCCSCC--CCSSSTTHHHHHHGGGSSSEEEEECCTTCCCCCC--------CCCTTEEEECCCCHHH
T ss_pred ccccccCCCcEEEEeCCcccccCccHHHHHHHHHHhhccCceEEEEecCccccccc--------cCCCCEEEEeecCHHH
Confidence 88988888999999999987543 3678889999999999999998776443212 2348999999999999
Q ss_pred HhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCc
Q 045998 290 VLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLN 369 (408)
Q Consensus 290 lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~ 369 (408)
+|+|+++ |||||||||++||+++|||+|++|+++||+.||+++++ .|+|+.++. ...+++ +|+++|+|
T Consensus 301 lL~~~~~--~v~h~G~~s~~Eal~~GvP~v~~P~~~dQ~~na~~v~~-~G~g~~l~~---~~~~~~----al~~lL~d-- 368 (400)
T 4amg_A 301 LLETCDA--IIHHGGSGTLLTALAAGVPQCVIPHGSYQDTNRDVLTG-LGIGFDAEA---GSLGAE----QCRRLLDD-- 368 (400)
T ss_dssp HHTTCSE--EEECCCHHHHHHHHHHTCCEEECCC---CHHHHHHHHH-HTSEEECCT---TTCSHH----HHHHHHHC--
T ss_pred Hhhhhhh--eeccCCccHHHHHHHhCCCEEEecCcccHHHHHHHHHH-CCCEEEcCC---CCchHH----HHHHHHcC--
Confidence 9999998 99999999999999999999999999999999999998 999999986 566654 67788888
Q ss_pred HHHHHHHHHHHHHHHHH
Q 045998 370 ATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 370 ~~~~~~~a~~l~~~~~~ 386 (408)
++||+||+++++.+++
T Consensus 369 -~~~r~~a~~l~~~~~~ 384 (400)
T 4amg_A 369 -AGLREAALRVRQEMSE 384 (400)
T ss_dssp -HHHHHHHHHHHHHHHT
T ss_pred -HHHHHHHHHHHHHHHc
Confidence 8999999999999876
No 10
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=99.97 E-value=1.7e-29 Score=250.20 Aligned_cols=334 Identities=13% Similarity=0.132 Sum_probs=219.7
Q ss_pred CCCCCCeEEEEcCCCCCCCccc----ccCHHHHHHH-HHHHhhHHHHHHHHHhhcCCCCccEEEEC-CCCCcHHHHHHHc
Q 045998 8 RITESTVQFVFFPDGLSDDFDR----IKYVGAFIES-LQKVGSKNLSSIINNLSNNDKKKSCIITN-PFMPWVPDVAAEH 81 (408)
Q Consensus 8 ~i~~~gi~f~~i~~glp~~~~~----~~~~~~~~~~-~~~~~~~~l~~ll~~l~~~~~~~D~vI~D-~~~~~~~~vA~~l 81 (408)
.++..|++|++++..++..... ..++...+.. +.......+..+.+.+.+ .+||+||+| .+..++..+|+++
T Consensus 62 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~PDlVi~d~~~~~~~~~aA~~~ 139 (415)
T 3rsc_A 62 PVRAAGATVVPYQSEIIDADAAEVFGSDDLGVRPHLMYLRENVSVLRATAEALDG--DVPDLVLYDDFPFIAGQLLAARW 139 (415)
T ss_dssp HHHHTTCEEEECCCSTTTCCHHHHHHSSSSCHHHHHHHHHHHHHHHHHHHHHHSS--SCCSEEEEESTTHHHHHHHHHHT
T ss_pred HHHhcCCEEEeccccccccccchhhccccHHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchhhhHHHHHHHHh
Confidence 4556789999997555432210 1122222233 333334445555555544 589999999 7778899999999
Q ss_pred CCCeEEEecchhHHH------HHHHHhhcCCCCCCCCCCCCccccC-CCCCC-cccCCCCCCCCChhHHhhhcc-cceEE
Q 045998 82 KIPCAVLWIQACAAY------YIYYHYFKHPQLFPSLENPNEAVHL-PAMPS-LLVNELPSSLLPSDFVQKLDK-VKWIL 152 (408)
Q Consensus 82 gIP~v~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~-p~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~~l 152 (408)
|||++.+.+...... ......+ . . .+...... ..+.. +....++. ........ ++..+
T Consensus 140 giP~v~~~~~~~~~~~~~~~~~~~~~~~-~--~-----~p~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~l 206 (415)
T 3rsc_A 140 RRPAVRLSAAFASNEHYSFSQDMVTLAG-T--I-----DPLDLPVFRDTLRDLLAEHGLSR-----SVVDCWNHVEQLNL 206 (415)
T ss_dssp TCCEEEEESSCCCCSSCCHHHHHHHHHT-C--C-----CGGGCHHHHHHHHHHHHHTTCCC-----CHHHHHTCCCSEEE
T ss_pred CCCEEEEEecccccCccccccccccccc-c--C-----ChhhHHHHHHHHHHHHHHcCCCC-----ChhhhhcCCCCeEE
Confidence 999998864322100 0000000 0 0 00000000 00000 00000000 00011111 26667
Q ss_pred ccchhhccHHHHHHhhcc--CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCc
Q 045998 153 GSSFYELEENVVASMATF--TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSL 230 (408)
Q Consensus 153 vnt~~~le~~~~~~~~~~--~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~ 230 (408)
+.+.+.++.. +.. .++.++||++... .... +|....+++++|||++||.
T Consensus 207 ~~~~~~~~~~-----~~~~~~~~~~vGp~~~~~-------------------~~~~-----~~~~~~~~~~~v~v~~Gs~ 257 (415)
T 3rsc_A 207 VFVPKAFQIA-----GDTFDDRFVFVGPCFDDR-------------------RFLG-----EWTRPADDLPVVLVSLGTT 257 (415)
T ss_dssp ESSCTTTSTT-----GGGCCTTEEECCCCCCCC-------------------GGGC-----CCCCCSSCCCEEEEECTTT
T ss_pred EEcCcccCCC-----cccCCCceEEeCCCCCCc-------------------ccCc-----CccccCCCCCEEEEECCCC
Confidence 7666666543 222 2388999986431 0111 5555555678999999999
Q ss_pred ccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHH
Q 045998 231 LVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLE 310 (408)
Q Consensus 231 ~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~e 310 (408)
.....+.+..+++++++.+.+++|.++..... +. .+..++|+.+.+|+|+.++|+++++ ||||||+||++|
T Consensus 258 ~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~------~~-l~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~E 328 (415)
T 3rsc_A 258 FNDRPGFFRDCARAFDGQPWHVVMTLGGQVDP------AA-LGDLPPNVEAHRWVPHVKVLEQATV--CVTHGGMGTLME 328 (415)
T ss_dssp SCCCHHHHHHHHHHHTTSSCEEEEECTTTSCG------GG-GCCCCTTEEEESCCCHHHHHHHEEE--EEESCCHHHHHH
T ss_pred CCChHHHHHHHHHHHhcCCcEEEEEeCCCCCh------HH-hcCCCCcEEEEecCCHHHHHhhCCE--EEECCcHHHHHH
Confidence 87777889999999999899999988864211 11 1234589999999999999999999 999999999999
Q ss_pred HHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhc
Q 045998 311 TVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALED 390 (408)
Q Consensus 311 al~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~ 390 (408)
++++|+|+|++|...||..||+++++ .|+|+.+.. +.++.++|.++|++++.| ++++++++++++.+.+
T Consensus 329 a~~~G~P~v~~p~~~~q~~~a~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~---- 397 (415)
T 3rsc_A 329 ALYWGRPLVVVPQSFDVQPMARRVDQ-LGLGAVLPG---EKADGDTLLAAVGAVAAD---PALLARVEAMRGHVRR---- 397 (415)
T ss_dssp HHHTTCCEEECCCSGGGHHHHHHHHH-HTCEEECCG---GGCCHHHHHHHHHHHHTC---HHHHHHHHHHHHHHHH----
T ss_pred HHHhCCCEEEeCCcchHHHHHHHHHH-cCCEEEccc---CCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----
Confidence 99999999999999999999999998 999999986 678999999999999998 8999999999998754
Q ss_pred CCChHHHHHHHHHHH
Q 045998 391 GGSSDANINRFINEI 405 (408)
Q Consensus 391 gg~s~~~~~~~v~~l 405 (408)
++++.+..+.+.+.+
T Consensus 398 ~~~~~~~~~~i~~~~ 412 (415)
T 3rsc_A 398 AGGAARAADAVEAYL 412 (415)
T ss_dssp SCHHHHHHHHHHHHH
T ss_pred cCHHHHHHHHHHHHh
Confidence 355555555554443
No 11
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=99.97 E-value=7.9e-30 Score=252.35 Aligned_cols=159 Identities=21% Similarity=0.257 Sum_probs=140.3
Q ss_pred cchhhhhhhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEec
Q 045998 205 CSCIEIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKW 284 (408)
Q Consensus 205 ~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w 284 (408)
.+|+++.+|++. .+++|||+|||+.. ..+.+..+++++++.++++||+.+..... .+ ..++|+++.+|
T Consensus 208 ~~~~~l~~~l~~--~~~~Vlv~~Gs~~~-~~~~~~~~~~al~~~~~~vv~~~g~~~~~---~~------~~~~~v~~~~~ 275 (404)
T 3h4t_A 208 PLSAELEGFLRA--GSPPVYVGFGSGPA-PAEAARVAIEAVRAQGRRVVLSSGWAGLG---RI------DEGDDCLVVGE 275 (404)
T ss_dssp CCCHHHHHHHHT--SSCCEEECCTTSCC-CTTHHHHHHHHHHHTTCCEEEECTTTTCC---CS------SCCTTEEEESS
T ss_pred CCCHHHHHHHhc--CCCeEEEECCCCCC-cHHHHHHHHHHHHhCCCEEEEEeCCcccc---cc------cCCCCEEEecC
Confidence 457788899985 35789999999987 67788999999999999999998865432 11 22589999999
Q ss_pred ccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHH
Q 045998 285 CSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 285 ~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~v 364 (408)
+||.++|+++++ ||||||+||+.|++++|||+|++|+++||+.||+++++ .|+|+.+.. ..++.++|.++|+++
T Consensus 276 ~~~~~ll~~~d~--~v~~gG~~t~~Eal~~GvP~v~~p~~~dQ~~na~~~~~-~G~g~~l~~---~~~~~~~l~~ai~~l 349 (404)
T 3h4t_A 276 VNHQVLFGRVAA--VVHHGGAGTTTAVTRAGAPQVVVPQKADQPYYAGRVAD-LGVGVAHDG---PTPTVESLSAALATA 349 (404)
T ss_dssp CCHHHHGGGSSE--EEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECSS---SSCCHHHHHHHHHHH
T ss_pred CCHHHHHhhCcE--EEECCcHHHHHHHHHcCCCEEEcCCcccHHHHHHHHHH-CCCEeccCc---CCCCHHHHHHHHHHH
Confidence 999999999998 99999999999999999999999999999999999998 999999986 778999999999999
Q ss_pred hcCCcHHHHHHHHHHHHHHHH
Q 045998 365 TQGLNATQMKKRAVAWKEAAK 385 (408)
Q Consensus 365 l~~~~~~~~~~~a~~l~~~~~ 385 (408)
++ ++|+++++++++.++
T Consensus 350 l~----~~~~~~~~~~~~~~~ 366 (404)
T 3h4t_A 350 LT----PGIRARAAAVAGTIR 366 (404)
T ss_dssp TS----HHHHHHHHHHHTTCC
T ss_pred hC----HHHHHHHHHHHHHHh
Confidence 96 589999999998763
No 12
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=99.97 E-value=2.5e-29 Score=250.21 Aligned_cols=319 Identities=15% Similarity=0.104 Sum_probs=211.8
Q ss_pred CCCCCeEEEEcCCCCCCCccc----ccCHHHHHHHHHHHhhHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCC
Q 045998 9 ITESTVQFVFFPDGLSDDFDR----IKYVGAFIESLQKVGSKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIP 84 (408)
Q Consensus 9 i~~~gi~f~~i~~glp~~~~~----~~~~~~~~~~~~~~~~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP 84 (408)
++..|+++++++..++.+... ..+....+..+...+...+..+.+.+.+ .+||+||+|.+..|+..+|+.+|||
T Consensus 50 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~A~~~giP 127 (430)
T 2iyf_A 50 VAATGPRPVLYHSTLPGPDADPEAWGSTLLDNVEPFLNDAIQALPQLADAYAD--DIPDLVLHDITSYPARVLARRWGVP 127 (430)
T ss_dssp HHTTSCEEEECCCCSCCTTSCGGGGCSSHHHHHHHHHHHHHHHHHHHHHHHTT--SCCSEEEEETTCHHHHHHHHHHTCC
T ss_pred HHhCCCEEEEcCCcCccccccccccchhhHHHHHHHHHHHHHHHHHHHHHhhc--cCCCEEEECCccHHHHHHHHHcCCC
Confidence 456789999998765544321 1233333333333333344555555543 5899999998878899999999999
Q ss_pred eEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCC-------C-cccCCCCCCCCChhHHhhhcccceEEccch
Q 045998 85 CAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMP-------S-LLVNELPSSLLPSDFVQKLDKVKWILGSSF 156 (408)
Q Consensus 85 ~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~-------~-~~~~~~~~~~~~~~~~~~~~~~~~~lvnt~ 156 (408)
++.+++.......+...+...... .....|+.. . +....++ . ........++.+++++.
T Consensus 128 ~v~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~---~--~~~~~~~~~~~~l~~~~ 194 (430)
T 2iyf_A 128 AVSLSPNLVAWKGYEEEVAEPMWR--------EPRQTERGRAYYARFEAWLKENGIT---E--HPDTFASHPPRSLVLIP 194 (430)
T ss_dssp EEEEESSCCCCTTHHHHTHHHHHH--------HHHHSHHHHHHHHHHHHHHHHTTCC---S--CHHHHHHCCSSEEECSC
T ss_pred EEEEecccccccccccccccchhh--------hhccchHHHHHHHHHHHHHHHhCCC---C--CHHHHhcCCCcEEEeCc
Confidence 999886543110000000000000 000000000 0 0000000 0 01112224678899999
Q ss_pred hhccHHHHHHhhcc-CC-ceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcccCC
Q 045998 157 YELEENVVASMATF-TP-IIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLS 234 (408)
Q Consensus 157 ~~le~~~~~~~~~~-~p-~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~ 234 (408)
+.+++.. +.. .+ +++|||.+... .... +|.+..+++++|||++||.....
T Consensus 195 ~~~~~~~----~~~~~~~v~~vG~~~~~~-------------------~~~~-----~~~~~~~~~~~v~v~~Gs~~~~~ 246 (430)
T 2iyf_A 195 KALQPHA----DRVDEDVYTFVGACQGDR-------------------AEEG-----GWQRPAGAEKVVLVSLGSAFTKQ 246 (430)
T ss_dssp GGGSTTG----GGSCTTTEEECCCCC------------------------CC-----CCCCCTTCSEEEEEECTTTCC-C
T ss_pred HHhCCCc----ccCCCccEEEeCCcCCCC-------------------CCCC-----CCccccCCCCeEEEEcCCCCCCc
Confidence 8887542 122 24 88999865421 0011 45554456789999999998556
Q ss_pred HHHHHHHHHHHHhC-CCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHH
Q 045998 235 QNQIDSIAAALINT-KRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVA 313 (408)
Q Consensus 235 ~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~ 313 (408)
.+.+.++++++++. +.+++|+++..... +.+ +..++|+.+.+|+||.++|+++++ ||||||+||++||++
T Consensus 247 ~~~~~~~~~~l~~~~~~~~~~~~G~~~~~------~~l-~~~~~~v~~~~~~~~~~~l~~ad~--~v~~~G~~t~~Ea~~ 317 (430)
T 2iyf_A 247 PAFYRECVRAFGNLPGWHLVLQIGRKVTP------AEL-GELPDNVEVHDWVPQLAILRQADL--FVTHAGAGGSQEGLA 317 (430)
T ss_dssp HHHHHHHHHHHTTCTTEEEEEECC---CG------GGG-CSCCTTEEEESSCCHHHHHTTCSE--EEECCCHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCCCeEEEEEeCCCCCh------HHh-ccCCCCeEEEecCCHHHHhhccCE--EEECCCccHHHHHHH
Confidence 78889999999885 88899988864321 111 234589999999999999999998 999999999999999
Q ss_pred cCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 045998 314 AGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 314 ~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 386 (408)
+|+|+|++|..+||..|++++++ .|+|+.+.. +.++.++|.++|+++++| +++++++.++++.+++
T Consensus 318 ~G~P~i~~p~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~ 383 (430)
T 2iyf_A 318 TATPMIAVPQAVDQFGNADMLQG-LGVARKLAT---EEATADLLRETALALVDD---PEVARRLRRIQAEMAQ 383 (430)
T ss_dssp TTCCEEECCCSHHHHHHHHHHHH-TTSEEECCC---C-CCHHHHHHHHHHHHHC---HHHHHHHHHHHHHHHH
T ss_pred hCCCEEECCCccchHHHHHHHHH-cCCEEEcCC---CCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHHh
Confidence 99999999999999999999998 999999876 678999999999999998 7899999999888765
No 13
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=99.96 E-value=2.3e-28 Score=240.41 Aligned_cols=339 Identities=15% Similarity=0.178 Sum_probs=219.4
Q ss_pred CCCCCCeEEEEcCCCCCCCc----ccccCHHHHHHH-HHHHhhHHHHHHHHHhhcCCCCccEEEEC-CCCCcHHHHHHHc
Q 045998 8 RITESTVQFVFFPDGLSDDF----DRIKYVGAFIES-LQKVGSKNLSSIINNLSNNDKKKSCIITN-PFMPWVPDVAAEH 81 (408)
Q Consensus 8 ~i~~~gi~f~~i~~glp~~~----~~~~~~~~~~~~-~~~~~~~~l~~ll~~l~~~~~~~D~vI~D-~~~~~~~~vA~~l 81 (408)
.++..|++|++++..++... ....++...+.. +.......+..+.+.+.+ .+||+||+| .+..++..+|+++
T Consensus 46 ~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~--~~pD~Vi~d~~~~~~~~~aA~~~ 123 (402)
T 3ia7_A 46 EVKAAGAEVVLYKSEFDTFHVPEVVKQEDAETQLHLVYVRENVAILRAAEEALGD--NPPDLVVYDVFPFIAGRLLAARW 123 (402)
T ss_dssp HHHHTTCEEEECCCGGGTSSSSSSSCCTTHHHHHHHHHHHHHHHHHHHHHHHHTT--CCCSEEEEESTTHHHHHHHHHHH
T ss_pred HHHHcCCEEEecccccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHhc--cCCCEEEECchHHHHHHHHHHhh
Confidence 34567899999875433221 111344444444 444444455566666544 589999999 7778999999999
Q ss_pred CCCeEEEecchhHHHHHHH--HhhcCCCCCCCCCCCCcccc-CCCCCC-cccCCCCCCCCChhHHhhhccc-ceEEccch
Q 045998 82 KIPCAVLWIQACAAYYIYY--HYFKHPQLFPSLENPNEAVH-LPAMPS-LLVNELPSSLLPSDFVQKLDKV-KWILGSSF 156 (408)
Q Consensus 82 gIP~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~-~p~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~~lvnt~ 156 (408)
|||++.+++.......... ........ . .+..... ...+.. +....+.. ......... +..++.+.
T Consensus 124 giP~v~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~g~~~-----~~~~~~~~~~~~~l~~~~ 194 (402)
T 3ia7_A 124 DRPAVRLTGGFAANEHYSLFKELWKSNGQ--R--HPADVEAVHSVLVDLLGKYGVDT-----PVKEYWDEIEGLTIVFLP 194 (402)
T ss_dssp TCCEEEEESSCCCBTTBCHHHHHHHHHTC--C--CGGGSHHHHHHHHHHHHTTTCCS-----CHHHHHTCCCSCEEESSC
T ss_pred CCCEEEEecccccCccccccccccccccc--c--ChhhHHHHHHHHHHHHHHcCCCC-----ChhhhhcCCCCeEEEEcC
Confidence 9999988643221000000 00000000 0 0000000 000000 00000000 000111112 55666666
Q ss_pred hhccHHHHHHhhcc-CCceeeCCCCCccccCCCCCCCCCCCCCcccccccchhhhhhhhccCCCCceEEEecCCcccCCH
Q 045998 157 YELEENVVASMATF-TPIIPVGPLVSPFMLGKQENATAPSLDMWSTAEECSCIEIHQWLNKKPPSSVIYISFGSLLVLSQ 235 (408)
Q Consensus 157 ~~le~~~~~~~~~~-~p~~~vGpl~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~~~ 235 (408)
++++... ... .++.++||+.... .... .|+...+++++|||++||......
T Consensus 195 ~~~~~~~----~~~~~~~~~vGp~~~~~-------------------~~~~-----~~~~~~~~~~~v~v~~G~~~~~~~ 246 (402)
T 3ia7_A 195 KSFQPFA----ETFDERFAFVGPTLTGR-------------------DGQP-----GWQPPRPDAPVLLVSLGNQFNEHP 246 (402)
T ss_dssp GGGSTTG----GGCCTTEEECCCCCCC-----------------------C-----CCCCSSTTCCEEEEECCSCSSCCH
T ss_pred hHhCCcc----ccCCCCeEEeCCCCCCc-------------------ccCC-----CCcccCCCCCEEEEECCCCCcchH
Confidence 6555331 111 2389999986432 0111 555545567899999999987777
Q ss_pred HHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcC
Q 045998 236 NQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAG 315 (408)
Q Consensus 236 ~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~G 315 (408)
+.+..+++++.+.+.+++|.++..... +. .+..++|+.+.+|+|+.++|+++++ ||||||+||++|++++|
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~g~~~~~------~~-~~~~~~~v~~~~~~~~~~ll~~ad~--~v~~~G~~t~~Ea~~~G 317 (402)
T 3ia7_A 247 EFFRACAQAFADTPWHVVMAIGGFLDP------AV-LGPLPPNVEAHQWIPFHSVLAHARA--CLTHGTTGAVLEAFAAG 317 (402)
T ss_dssp HHHHHHHHHHTTSSCEEEEECCTTSCG------GG-GCSCCTTEEEESCCCHHHHHTTEEE--EEECCCHHHHHHHHHTT
T ss_pred HHHHHHHHHHhcCCcEEEEEeCCcCCh------hh-hCCCCCcEEEecCCCHHHHHhhCCE--EEECCCHHHHHHHHHhC
Confidence 889999999999899999988864211 11 1234589999999999999999999 99999999999999999
Q ss_pred CceeeccC-CCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCCh
Q 045998 316 VPVIAYPE-WTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSS 394 (408)
Q Consensus 316 vP~i~~P~-~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s 394 (408)
+|+|++|. ..||..|+.++++ .|+|+.+.. +.++.+.|.++|+++++| ++++++++++++.+. .++++
T Consensus 318 ~P~v~~p~~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~~~~~ll~~---~~~~~~~~~~~~~~~----~~~~~ 386 (402)
T 3ia7_A 318 VPLVLVPHFATEAAPSAERVIE-LGLGSVLRP---DQLEPASIREAVERLAAD---SAVRERVRRMQRDIL----SSGGP 386 (402)
T ss_dssp CCEEECGGGCGGGHHHHHHHHH-TTSEEECCG---GGCSHHHHHHHHHHHHHC---HHHHHHHHHHHHHHH----TSCHH
T ss_pred CCEEEeCCCcccHHHHHHHHHH-cCCEEEccC---CCCCHHHHHHHHHHHHcC---HHHHHHHHHHHHHHh----hCChH
Confidence 99999999 9999999999998 999999986 678999999999999998 899999999988774 34555
Q ss_pred HHHHHHHHHHH
Q 045998 395 DANINRFINEI 405 (408)
Q Consensus 395 ~~~~~~~v~~l 405 (408)
.+..+.+.+.+
T Consensus 387 ~~~~~~i~~~~ 397 (402)
T 3ia7_A 387 ARAADEVEAYL 397 (402)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 55555544433
No 14
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=99.96 E-value=2.9e-28 Score=238.97 Aligned_cols=268 Identities=13% Similarity=0.157 Sum_probs=190.7
Q ss_pred HHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEecchhHHHHHHHHhhcCCCCCCCCCCCCccccCCCCCC
Q 045998 47 NLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWIQACAAYYIYYHYFKHPQLFPSLENPNEAVHLPAMPS 126 (408)
Q Consensus 47 ~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~ 126 (408)
.+..+.+.+++ .+||+||+|.+..++..+|+.+|||++.++..+.. . .++..
T Consensus 95 ~~~~l~~~l~~--~~pD~Vi~~~~~~~~~~~a~~~giP~v~~~~~~~~--------------------~------~~~~~ 146 (384)
T 2p6p_A 95 SLPRMLDFSRA--WRPDLIVGGTMSYVAPLLALHLGVPHARQTWDAVD--------------------A------DGIHP 146 (384)
T ss_dssp HHHHHHHHHHH--HCCSEEEEETTCTHHHHHHHHHTCCEEEECCSSCC--------------------C------TTTHH
T ss_pred HHHHHHHHHhc--cCCcEEEECcchhhHHHHHHhcCCCEEEeccCCcc--------------------c------chhhH
Confidence 34444444443 47999999988888999999999999987532210 0 00000
Q ss_pred cccCCCCCCCCChhHHhhh-----cccceEEccchhhccHHHHHHhhccC--CceeeCCCCCccccCCCCCCCCCCCCCc
Q 045998 127 LLVNELPSSLLPSDFVQKL-----DKVKWILGSSFYELEENVVASMATFT--PIIPVGPLVSPFMLGKQENATAPSLDMW 199 (408)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~-----~~~~~~lvnt~~~le~~~~~~~~~~~--p~~~vGpl~~~~~~~~~~~~~~~g~~~~ 199 (408)
. . ...+. .....+ ..++.+++++.+.++++. +.+ ++.++++ .
T Consensus 147 ~-~---~~~~~--~~~~~~g~~~~~~~~~~l~~~~~~~~~~~-----~~~~~~~~~~~~---~----------------- 195 (384)
T 2p6p_A 147 G-A---DAELR--PELSELGLERLPAPDLFIDICPPSLRPAN-----AAPARMMRHVAT---S----------------- 195 (384)
T ss_dssp H-H---HHHTH--HHHHHTTCSSCCCCSEEEECSCGGGSCTT-----SCCCEECCCCCC---C-----------------
T ss_pred H-H---HHHHH--HHHHHcCCCCCCCCCeEEEECCHHHCCCC-----CCCCCceEecCC---C-----------------
Confidence 0 0 00000 000000 115678888888776431 111 1333311 0
Q ss_pred ccccccchhhhhhhhccCCCCceEEEecCCcccC-----CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhh
Q 045998 200 STAEECSCIEIHQWLNKKPPSSVIYISFGSLLVL-----SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEE 274 (408)
Q Consensus 200 ~~~~~~l~~~l~~~l~~~~~~~vvyvs~GS~~~~-----~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~ 274 (408)
....+. +|++..+++++|||++||.... +.+.+..++++|++.+.+++|+.+.... +.+ +.
T Consensus 196 -~~~~~~-----~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~-------~~l-~~ 261 (384)
T 2p6p_A 196 -RQCPLE-----PWMYTRDTRQRVLVTSGSRVAKESYDRNFDFLRGLAKDLVRWDVELIVAAPDTVA-------EAL-RA 261 (384)
T ss_dssp -CCCBCC-----HHHHCCCSSCEEEEECSSSSSCCSSCCCCTTHHHHHHHHHTTTCEEEEECCHHHH-------HHH-HH
T ss_pred -CCCCCC-----chhhcCCCCCEEEEECCCCCccccccccHHHHHHHHHHHhcCCcEEEEEeCCCCH-------Hhh-CC
Confidence 001233 8888755678999999998864 4577889999999999999998875211 111 13
Q ss_pred cCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCH
Q 045998 275 TKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSI 354 (408)
Q Consensus 275 ~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~ 354 (408)
.++|+.+ +|+||.++|+++++ ||||||+||++||+++|+|+|++|...||..|++++++ .|+|+.+.. +.++.
T Consensus 262 ~~~~v~~-~~~~~~~~l~~~d~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~dq~~~a~~~~~-~g~g~~~~~---~~~~~ 334 (384)
T 2p6p_A 262 EVPQARV-GWTPLDVVAPTCDL--LVHHAGGVSTLTGLSAGVPQLLIPKGSVLEAPARRVAD-YGAAIALLP---GEDST 334 (384)
T ss_dssp HCTTSEE-ECCCHHHHGGGCSE--EEECSCTTHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TCCCH
T ss_pred CCCceEE-cCCCHHHHHhhCCE--EEeCCcHHHHHHHHHhCCCEEEccCcccchHHHHHHHH-CCCeEecCc---CCCCH
Confidence 5689999 99999999999988 99999999999999999999999999999999999998 999999875 67899
Q ss_pred HHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 045998 355 QQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRF 401 (408)
Q Consensus 355 ~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~ 401 (408)
++|.++|++++.| ++|+++++++++.+++ .++.++.++.+
T Consensus 335 ~~l~~~i~~ll~~---~~~~~~~~~~~~~~~~----~~~~~~~~~~i 374 (384)
T 2p6p_A 335 EAIADSCQELQAK---DTYARRAQDLSREISG----MPLPATVVTAL 374 (384)
T ss_dssp HHHHHHHHHHHHC---HHHHHHHHHHHHHHHT----SCCHHHHHHHH
T ss_pred HHHHHHHHHHHcC---HHHHHHHHHHHHHHHh----CCCHHHHHHHH
Confidence 9999999999998 8999999999998865 34444444443
No 15
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=99.96 E-value=3.8e-28 Score=211.17 Aligned_cols=164 Identities=20% Similarity=0.365 Sum_probs=141.3
Q ss_pred cchhhhhhhhccCCCCceEEEecCCcc-cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEe
Q 045998 205 CSCIEIHQWLNKKPPSSVIYISFGSLL-VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVK 283 (408)
Q Consensus 205 ~l~~~l~~~l~~~~~~~vvyvs~GS~~-~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~ 283 (408)
.+|+++.+|++..+++++|||++||.. ..+.+.+..++++|++.+.+++|+.+..... . .++|+++.+
T Consensus 6 ~l~~~~~~~l~~~~~~~~vlv~~Gs~~~~~~~~~~~~~~~al~~~~~~~~~~~g~~~~~---~--------~~~~v~~~~ 74 (170)
T 2o6l_A 6 PLPKEMEDFVQSSGENGVVVFSLGSMVSNMTEERANVIASALAQIPQKVLWRFDGNKPD---T--------LGLNTRLYK 74 (170)
T ss_dssp CCCHHHHHHHHTTTTTCEEEEECCSCCTTCCHHHHHHHHHHHTTSSSEEEEECCSSCCT---T--------CCTTEEEES
T ss_pred CCCHHHHHHHHcCCCCCEEEEECCCCcccCCHHHHHHHHHHHHhCCCeEEEEECCcCcc---c--------CCCcEEEec
Confidence 467889999998767789999999987 4577888999999998899999998754322 2 347999999
Q ss_pred cccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHH
Q 045998 284 WCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDE 363 (408)
Q Consensus 284 w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ 363 (408)
|+||.++|.|++..+||||||+||++|++++|+|+|++|...||..||.++++ .|+|+.+.. ..++.++|.++|++
T Consensus 75 ~~~~~~~l~~~~ad~~I~~~G~~t~~Ea~~~G~P~i~~p~~~~Q~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ 150 (170)
T 2o6l_A 75 WIPQNDLLGHPKTRAFITHGGANGIYEAIYHGIPMVGIPLFADQPDNIAHMKA-RGAAVRVDF---NTMSSTDLLNALKR 150 (170)
T ss_dssp SCCHHHHHTSTTEEEEEECCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHHH
T ss_pred CCCHHHHhcCCCcCEEEEcCCccHHHHHHHcCCCEEeccchhhHHHHHHHHHH-cCCeEEecc---ccCCHHHHHHHHHH
Confidence 99999999776777799999999999999999999999999999999999998 999999976 67899999999999
Q ss_pred HhcCCcHHHHHHHHHHHHHHHHH
Q 045998 364 ATQGLNATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 364 vl~~~~~~~~~~~a~~l~~~~~~ 386 (408)
++.+ ++|+++|+++++.+++
T Consensus 151 ll~~---~~~~~~a~~~~~~~~~ 170 (170)
T 2o6l_A 151 VIND---PSYKENVMKLSRIQHD 170 (170)
T ss_dssp HHHC---HHHHHHHHHHC-----
T ss_pred HHcC---HHHHHHHHHHHHHhhC
Confidence 9988 7899999999998763
No 16
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=99.95 E-value=9.2e-28 Score=240.11 Aligned_cols=158 Identities=16% Similarity=0.239 Sum_probs=132.7
Q ss_pred hhhccCCCCceEEEecCCcccC---CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH
Q 045998 212 QWLNKKPPSSVIYISFGSLLVL---SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE 288 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~~~---~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~ 288 (408)
+|++..+++++|||++||.... ..+.+..++++|++.+++++|+.+..... .+. ..++|+++.+|+||.
T Consensus 259 ~~l~~~~~~~~v~v~~Gs~~~~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~---~l~-----~~~~~v~~~~~~~~~ 330 (441)
T 2yjn_A 259 EWLHDEPERRRVCLTLGISSRENSIGQVSIEELLGAVGDVDAEIIATFDAQQLE---GVA-----NIPDNVRTVGFVPMH 330 (441)
T ss_dssp GGGSSCCSSCEEEEEC----------CCSTTTTHHHHHTSSSEEEECCCTTTTS---SCS-----SCCSSEEECCSCCHH
T ss_pred hHhhcCCCCCEEEEECCCCcccccChHHHHHHHHHHHHcCCCEEEEEECCcchh---hhc-----cCCCCEEEecCCCHH
Confidence 8998766778999999998853 33557788899999999999998864332 221 235899999999999
Q ss_pred HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
++|+++++ ||||||+||++|++++|||+|++|...||..||+++++ .|+|+.+.. ..++.++|.++|+++++|
T Consensus 331 ~ll~~ad~--~V~~~G~~t~~Ea~~~G~P~i~~p~~~dQ~~na~~l~~-~g~g~~~~~---~~~~~~~l~~~i~~ll~~- 403 (441)
T 2yjn_A 331 ALLPTCAA--TVHHGGPGSWHTAAIHGVPQVILPDGWDTGVRAQRTQE-FGAGIALPV---PELTPDQLRESVKRVLDD- 403 (441)
T ss_dssp HHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSHHHHHHHHHHHH-HTSEEECCT---TTCCHHHHHHHHHHHHHC-
T ss_pred HHHhhCCE--EEECCCHHHHHHHHHhCCCEEEeCCcccHHHHHHHHHH-cCCEEEccc---ccCCHHHHHHHHHHHhcC-
Confidence 99999998 99999999999999999999999999999999999998 999999976 678999999999999998
Q ss_pred cHHHHHHHHHHHHHHHHH
Q 045998 369 NATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 369 ~~~~~~~~a~~l~~~~~~ 386 (408)
++|+++++++++.+++
T Consensus 404 --~~~~~~~~~~~~~~~~ 419 (441)
T 2yjn_A 404 --PAHRAGAARMRDDMLA 419 (441)
T ss_dssp --HHHHHHHHHHHHHHHT
T ss_pred --HHHHHHHHHHHHHHHc
Confidence 8999999999988754
No 17
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=99.93 E-value=5.9e-26 Score=223.74 Aligned_cols=168 Identities=16% Similarity=0.218 Sum_probs=138.1
Q ss_pred hhhccCCCCceEEEecCCcccC--CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHH
Q 045998 212 QWLNKKPPSSVIYISFGSLLVL--SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEK 289 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~~~--~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~ 289 (408)
+|+...+++++|||++||.... ..+.+..++++|++.+.+++|+.+..... .+ +..++|+.+.+|+|+.+
T Consensus 224 ~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~l~~~~~~~v~~~g~~~~~---~l-----~~~~~~v~~~~~~~~~~ 295 (398)
T 3oti_A 224 DRLPPVPARPEVAITMGTIELQAFGIGAVEPIIAAAGEVDADFVLALGDLDIS---PL-----GTLPRNVRAVGWTPLHT 295 (398)
T ss_dssp SSCCCCCSSCEEEECCTTTHHHHHCGGGHHHHHHHHHTSSSEEEEECTTSCCG---GG-----CSCCTTEEEESSCCHHH
T ss_pred hhhhcCCCCCEEEEEcCCCccccCcHHHHHHHHHHHHcCCCEEEEEECCcChh---hh-----ccCCCcEEEEccCCHHH
Confidence 6776666778999999999642 55678889999999999999998875432 22 13458999999999999
Q ss_pred HhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhH--HhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 290 VLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDA--KLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 290 lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na--~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+|+++++ ||||||.||++||+++|+|+|++|...||..|+ .++++ .|+|+.+.. ...+.+.|. ++++|
T Consensus 296 ll~~ad~--~v~~~G~~t~~Eal~~G~P~v~~p~~~dq~~~a~~~~~~~-~g~g~~~~~---~~~~~~~l~----~ll~~ 365 (398)
T 3oti_A 296 LLRTCTA--VVHHGGGGTVMTAIDAGIPQLLAPDPRDQFQHTAREAVSR-RGIGLVSTS---DKVDADLLR----RLIGD 365 (398)
T ss_dssp HHTTCSE--EEECCCHHHHHHHHHHTCCEEECCCTTCCSSCTTHHHHHH-HTSEEECCG---GGCCHHHHH----HHHHC
T ss_pred HHhhCCE--EEECCCHHHHHHHHHhCCCEEEcCCCchhHHHHHHHHHHH-CCCEEeeCC---CCCCHHHHH----HHHcC
Confidence 9999999 999999999999999999999999999999999 99998 999999986 667777776 78888
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 045998 368 LNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEI 405 (408)
Q Consensus 368 ~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 405 (408)
++|+++++++++.+.+ ..+.. .+.+.+.++
T Consensus 366 ---~~~~~~~~~~~~~~~~----~~~~~-~~~~~l~~l 395 (398)
T 3oti_A 366 ---ESLRTAAREVREEMVA----LPTPA-ETVRRIVER 395 (398)
T ss_dssp ---HHHHHHHHHHHHHHHT----SCCHH-HHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHh----CCCHH-HHHHHHHHH
Confidence 8999999999998754 34433 344444444
No 18
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=99.93 E-value=2.4e-25 Score=219.30 Aligned_cols=158 Identities=15% Similarity=0.224 Sum_probs=123.0
Q ss_pred hhhccCCCCceEEEecCCcccC--------CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEe
Q 045998 212 QWLNKKPPSSVIYISFGSLLVL--------SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVK 283 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~~~--------~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~ 283 (408)
+|+...+++++|||++||.... ..+.+..+++++.+.+.+++|+.+..... .+ +..++|+++.+
T Consensus 219 ~~~~~~~~~~~v~v~~G~~~~~~~~~~~~~~~~~~~~~~~al~~~~~~~v~~~~~~~~~---~l-----~~~~~~v~~~~ 290 (398)
T 4fzr_A 219 SWVFEERKQPRLCLTFGTRVPLPNTNTIPGGLSLLQALSQELPKLGFEVVVAVSDKLAQ---TL-----QPLPEGVLAAG 290 (398)
T ss_dssp HHHHSCCSSCEEECC----------------CCSHHHHHHHGGGGTCEEEECCCC----------------CCTTEEEES
T ss_pred hhhhcCCCCCEEEEEccCcccccccccccchHHHHHHHHHHHHhCCCEEEEEeCCcchh---hh-----ccCCCcEEEeC
Confidence 7777666778999999998743 33558889999999999999988765322 22 13458999999
Q ss_pred cccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHH
Q 045998 284 WCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDE 363 (408)
Q Consensus 284 w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ 363 (408)
|+|+.++|+++++ ||||||.||++||+++|+|+|++|...||..|+.++++ .|+|+.+.. ..++.+.|.++|++
T Consensus 291 ~~~~~~ll~~ad~--~v~~gG~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~---~~~~~~~l~~ai~~ 364 (398)
T 4fzr_A 291 QFPLSAIMPACDV--VVHHGGHGTTLTCLSEGVPQVSVPVIAEVWDSARLLHA-AGAGVEVPW---EQAGVESVLAACAR 364 (398)
T ss_dssp CCCHHHHGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSGGGHHHHHHHHH-TTSEEECC----------CHHHHHHH
T ss_pred cCCHHHHHhhCCE--EEecCCHHHHHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHH
Confidence 9999999999999 99999999999999999999999999999999999998 999999976 67899999999999
Q ss_pred HhcCCcHHHHHHHHHHHHHHHHH
Q 045998 364 ATQGLNATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 364 vl~~~~~~~~~~~a~~l~~~~~~ 386 (408)
++.| +++++++++.++.+++
T Consensus 365 ll~~---~~~~~~~~~~~~~~~~ 384 (398)
T 4fzr_A 365 IRDD---SSYVGNARRLAAEMAT 384 (398)
T ss_dssp HHHC---THHHHHHHHHHHHHTT
T ss_pred HHhC---HHHHHHHHHHHHHHHc
Confidence 9998 7999999999887743
No 19
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=99.91 E-value=8.2e-23 Score=200.48 Aligned_cols=170 Identities=14% Similarity=0.226 Sum_probs=137.9
Q ss_pred hhhccCCCCceEEEecCCccc---CCHHHHHHHHHHHHhC-CCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccH
Q 045998 212 QWLNKKPPSSVIYISFGSLLV---LSQNQIDSIAAALINT-KRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQ 287 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~~---~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq 287 (408)
.|+...+++++|||++||... ...+.+..++++ ++. +.+++|+.+..... .+ +..++|+++.+|+|+
T Consensus 210 ~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~~~~-~~~p~~~~v~~~~~~~~~---~l-----~~~~~~v~~~~~~~~ 280 (391)
T 3tsa_A 210 AWGAARTSARRVCICMGRMVLNATGPAPLLRAVAAA-TELPGVEAVIAVPPEHRA---LL-----TDLPDNARIAESVPL 280 (391)
T ss_dssp GGGSSCCSSEEEEEECCHHHHHHHCSHHHHHHHHHH-HTSTTEEEEEECCGGGGG---GC-----TTCCTTEEECCSCCG
T ss_pred chhhcCCCCCEEEEEcCCCCCcccchHHHHHHHHHh-ccCCCeEEEEEECCcchh---hc-----ccCCCCEEEeccCCH
Confidence 677766677899999999853 337778888888 877 78899987764322 22 134589999999999
Q ss_pred HHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 288 EKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 288 ~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
.++|+++++ ||||||.||++||+++|+|+|++|...||..|+.++++ .|+|+.+... ....+.+.|.++|+++++|
T Consensus 281 ~~ll~~ad~--~v~~~G~~t~~Ea~~~G~P~v~~p~~~~q~~~a~~~~~-~g~g~~~~~~-~~~~~~~~l~~ai~~ll~~ 356 (391)
T 3tsa_A 281 NLFLRTCEL--VICAGGSGTAFTATRLGIPQLVLPQYFDQFDYARNLAA-AGAGICLPDE-QAQSDHEQFTDSIATVLGD 356 (391)
T ss_dssp GGTGGGCSE--EEECCCHHHHHHHHHTTCCEEECCCSTTHHHHHHHHHH-TTSEEECCSH-HHHTCHHHHHHHHHHHHTC
T ss_pred HHHHhhCCE--EEeCCCHHHHHHHHHhCCCEEecCCcccHHHHHHHHHH-cCCEEecCcc-cccCCHHHHHHHHHHHHcC
Confidence 999999999 99999999999999999999999999999999999998 9999998520 0137899999999999998
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 045998 368 LNATQMKKRAVAWKEAAKKALEDGGSSDANINRF 401 (408)
Q Consensus 368 ~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~ 401 (408)
++++++++++++.+. .+++..+..+.+
T Consensus 357 ---~~~~~~~~~~~~~~~----~~~~~~~~~~~i 383 (391)
T 3tsa_A 357 ---TGFAAAAIKLSDEIT----AMPHPAALVRTL 383 (391)
T ss_dssp ---THHHHHHHHHHHHHH----TSCCHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHH----cCCCHHHHHHHH
Confidence 789999998888773 345555544443
No 20
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=99.89 E-value=2e-21 Score=191.67 Aligned_cols=169 Identities=17% Similarity=0.226 Sum_probs=140.9
Q ss_pred hh-hccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCC-cccccccchhhhhhcCCCeEEEecccHHH
Q 045998 212 QW-LNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQE-NKEGGVLRAGFLEETKDRGLVVKWCSQEK 289 (408)
Q Consensus 212 ~~-l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~-~~~~~~lp~~~~~~~~~n~~v~~w~pq~~ 289 (408)
+| ....+++++||+++||......+.+..+++++.+.+.+++|+.+... .. .+. ..++|+.+.+|+|+.+
T Consensus 233 ~~~~~~~~~~~~vlv~~G~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~~~~~~---~l~-----~~~~~v~~~~~~~~~~ 304 (412)
T 3otg_A 233 AWLSSRDTARPLVYLTLGTSSGGTVEVLRAAIDGLAGLDADVLVASGPSLDVS---GLG-----EVPANVRLESWVPQAA 304 (412)
T ss_dssp GGGGGSCTTSCEEEEECTTTTCSCHHHHHHHHHHHHTSSSEEEEECCSSCCCT---TCC-----CCCTTEEEESCCCHHH
T ss_pred CccccccCCCCEEEEEcCCCCcCcHHHHHHHHHHHHcCCCEEEEEECCCCChh---hhc-----cCCCcEEEeCCCCHHH
Confidence 56 33334678999999999766678899999999999999999988654 22 121 3458999999999999
Q ss_pred HhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCc
Q 045998 290 VLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLN 369 (408)
Q Consensus 290 lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~ 369 (408)
+|+++++ ||+|||+||++||+++|+|+|++|..+||..|+..+++ .|+|+.+.. +.++.++|.++|++++.|
T Consensus 305 ~l~~ad~--~v~~~g~~t~~Ea~a~G~P~v~~p~~~~q~~~~~~v~~-~g~g~~~~~---~~~~~~~l~~ai~~ll~~-- 376 (412)
T 3otg_A 305 LLPHVDL--VVHHGGSGTTLGALGAGVPQLSFPWAGDSFANAQAVAQ-AGAGDHLLP---DNISPDSVSGAAKRLLAE-- 376 (412)
T ss_dssp HGGGCSE--EEESCCHHHHHHHHHHTCCEEECCCSTTHHHHHHHHHH-HTSEEECCG---GGCCHHHHHHHHHHHHHC--
T ss_pred HHhcCcE--EEECCchHHHHHHHHhCCCEEecCCchhHHHHHHHHHH-cCCEEecCc---ccCCHHHHHHHHHHHHhC--
Confidence 9999999 99999999999999999999999999999999999998 999999986 678999999999999998
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHH
Q 045998 370 ATQMKKRAVAWKEAAKKALEDGGSSDANINRF 401 (408)
Q Consensus 370 ~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~ 401 (408)
+++++++.+.++.+.+ ..+..+..+.+
T Consensus 377 -~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 403 (412)
T 3otg_A 377 -ESYRAGARAVAAEIAA----MPGPDEVVRLL 403 (412)
T ss_dssp -HHHHHHHHHHHHHHHH----SCCHHHHHTTH
T ss_pred -HHHHHHHHHHHHHHhc----CCCHHHHHHHH
Confidence 7899999888887644 34444444433
No 21
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=99.77 E-value=3.7e-17 Score=159.19 Aligned_cols=168 Identities=14% Similarity=0.101 Sum_probs=120.0
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhC----CCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH-HHhcc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINT----KRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE-KVLMH 293 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~----~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~-~lL~h 293 (408)
++++|+|..||.... ...+.+.++++.. +..++|+++..+.. .+.+ .....+.|+.+.+|+++. ++|+.
T Consensus 179 ~~~~ilv~gGs~g~~--~~~~~~~~al~~l~~~~~~~vi~~~G~~~~~---~~~~-~~~~~~~~~~v~~f~~dm~~~l~~ 252 (365)
T 3s2u_A 179 RRVNLLVLGGSLGAE--PLNKLLPEALAQVPLEIRPAIRHQAGRQHAE---ITAE-RYRTVAVEADVAPFISDMAAAYAW 252 (365)
T ss_dssp SCCEEEECCTTTTCS--HHHHHHHHHHHTSCTTTCCEEEEECCTTTHH---HHHH-HHHHTTCCCEEESCCSCHHHHHHH
T ss_pred CCcEEEEECCcCCcc--ccchhhHHHHHhcccccceEEEEecCccccc---cccc-eecccccccccccchhhhhhhhcc
Confidence 456899999998743 2334455666653 45677877765432 2212 223456789999999875 79999
Q ss_pred cCcceEEeccCcchHHHHHHcCCceeeccCC----CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCc
Q 045998 294 AAVSCFLTHCGWNSTLETVAAGVPVIAYPEW----TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLN 369 (408)
Q Consensus 294 ~~v~~fitHgG~~s~~eal~~GvP~i~~P~~----~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~ 369 (408)
+++ +|||+|.+|+.|++++|+|+|.+|+- .+|..||+.+++ .|+|+.+.. ..++.+.|.++|.+++.|+
T Consensus 253 aDl--vI~raG~~Tv~E~~a~G~P~Ilip~p~~~~~~Q~~NA~~l~~-~G~a~~l~~---~~~~~~~L~~~i~~ll~d~- 325 (365)
T 3s2u_A 253 ADL--VICRAGALTVSELTAAGLPAFLVPLPHAIDDHQTRNAEFLVR-SGAGRLLPQ---KSTGAAELAAQLSEVLMHP- 325 (365)
T ss_dssp CSE--EEECCCHHHHHHHHHHTCCEEECC-----CCHHHHHHHHHHT-TTSEEECCT---TTCCHHHHHHHHHHHHHCT-
T ss_pred ceE--EEecCCcchHHHHHHhCCCeEEeccCCCCCcHHHHHHHHHHH-CCCEEEeec---CCCCHHHHHHHHHHHHCCH-
Confidence 999 99999999999999999999999974 579999999998 999999986 7899999999999999983
Q ss_pred HHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 370 ATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 370 ~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
+.+ ++|++.+++. .... +...|.+.|.++.
T Consensus 326 --~~~---~~m~~~a~~~-~~~~-aa~~ia~~i~~la 355 (365)
T 3s2u_A 326 --ETL---RSMADQARSL-AKPE-ATRTVVDACLEVA 355 (365)
T ss_dssp --HHH---HHHHHHHHHT-CCTT-HHHHHHHHHHHHC
T ss_pred --HHH---HHHHHHHHhc-CCcc-HHHHHHHHHHHHH
Confidence 333 2333333332 2223 3445555555553
No 22
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=99.51 E-value=2.3e-14 Score=128.74 Aligned_cols=140 Identities=11% Similarity=0.116 Sum_probs=97.4
Q ss_pred hhccCCCCceEEEecCCcccCCHHHHHHH-----HHHHHhCC-CCEEEEEecCCcccccccchhh--------h------
Q 045998 213 WLNKKPPSSVIYISFGSLLVLSQNQIDSI-----AAALINTK-RPFLWVIRSQENKEGGVLRAGF--------L------ 272 (408)
Q Consensus 213 ~l~~~~~~~vvyvs~GS~~~~~~~~~~~~-----~~al~~~~-~~~iw~~~~~~~~~~~~lp~~~--------~------ 272 (408)
|+...+++++|||+.||... -.+.+..+ +++|.+.+ .+++|++|.........+-..+ .
T Consensus 21 ~~~~~~~~~~VlVtgGS~~~-~n~li~~vl~~~~l~~L~~~~~~~vv~q~G~~~~~~~~~~~~~~~~~~~~~l~p~~~~~ 99 (224)
T 2jzc_A 21 MLEGIIEEKALFVTCGATVP-FPKLVSCVLSDEFCQELIQYGFVRLIIQFGRNYSSEFEHLVQERGGQRESQKIPIDQFG 99 (224)
T ss_dssp ---CCCCSCCEEEECCSCCS-CHHHHHHHTSHHHHHHHHTTTCCCEEECCCSSSCCCCCSHHHHHTCEECSCCCSSCTTC
T ss_pred ccCCCCCCCEEEEEcCCchH-HHHHHHHHHHHHHHHHHhcCCCeEEEEEECCCchhhHHHHHHhhhcccccccccccccc
Confidence 33333456899999999843 23434433 48888887 7999999976531000000000 0
Q ss_pred ----------hhcCCCeEEEecccHH-HHhc-ccCcceEEeccCcchHHHHHHcCCceeeccCC----CChhhhHHhhhc
Q 045998 273 ----------EETKDRGLVVKWCSQE-KVLM-HAAVSCFLTHCGWNSTLETVAAGVPVIAYPEW----TDQPTDAKLLVD 336 (408)
Q Consensus 273 ----------~~~~~n~~v~~w~pq~-~lL~-h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~----~DQ~~na~~v~~ 336 (408)
....-++.+.+|+++. ++|+ .+++ +|||||.||++|++++|+|+|++|.. .||..||+++++
T Consensus 100 ~~~~~~~~~~~~~~~~v~v~~f~~~m~~~l~~~Adl--vIshaGagTv~Eal~~G~P~IvVP~~~~~~~HQ~~nA~~l~~ 177 (224)
T 2jzc_A 100 CGDTARQYVLMNGKLKVIGFDFSTKMQSIIRDYSDL--VISHAGTGSILDSLRLNKPLIVCVNDSLMDNHQQQIADKFVE 177 (224)
T ss_dssp TTCSCEEEESTTTSSEEEECCSSSSHHHHHHHHCSC--EEESSCHHHHHHHHHTTCCCCEECCSSCCCCHHHHHHHHHHH
T ss_pred ccccccccccccCCceEEEeeccchHHHHHHhcCCE--EEECCcHHHHHHHHHhCCCEEEEcCcccccchHHHHHHHHHH
Confidence 0001134556888776 8999 9999 99999999999999999999999984 359999999998
Q ss_pred eeeeEEEeecCCCCCcCHHHHHHHHHHH
Q 045998 337 VFKIGVRMRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 337 ~~g~G~~l~~~~~~~~~~~~l~~~i~~v 364 (408)
.|+++.+ +.+.|.++|+++
T Consensus 178 -~G~~~~~--------~~~~L~~~i~~l 196 (224)
T 2jzc_A 178 -LGYVWSC--------APTETGLIAGLR 196 (224)
T ss_dssp -HSCCCEE--------CSCTTTHHHHHH
T ss_pred -CCCEEEc--------CHHHHHHHHHHH
Confidence 8998765 336677777776
No 23
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=99.43 E-value=7.5e-12 Score=120.71 Aligned_cols=143 Identities=13% Similarity=0.065 Sum_probs=105.5
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhC--CCCEEEEEecCCcccccccchhhhhhcC-CCeEEEeccc-HHHHhccc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINT--KRPFLWVIRSQENKEGGVLRAGFLEETK-DRGLVVKWCS-QEKVLMHA 294 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~lp~~~~~~~~-~n~~v~~w~p-q~~lL~h~ 294 (408)
++++|++..|+... ......++++++.. +.++++++|..... .+.+ ..++.+ +|+.+.+|++ -..+++.+
T Consensus 182 ~~~~il~~~g~~~~--~k~~~~li~a~~~l~~~~~~l~i~G~~~~~---~l~~-~~~~~~~~~v~~~g~~~~~~~~~~~a 255 (364)
T 1f0k_A 182 GPVRVLVVGGSQGA--RILNQTMPQVAAKLGDSVTIWHQSGKGSQQ---SVEQ-AYAEAGQPQHKVTEFIDDMAAAYAWA 255 (364)
T ss_dssp SSEEEEEECTTTCC--HHHHHHHHHHHHHHGGGEEEEEECCTTCHH---HHHH-HHHHTTCTTSEEESCCSCHHHHHHHC
T ss_pred CCcEEEEEcCchHh--HHHHHHHHHHHHHhcCCcEEEEEcCCchHH---HHHH-HHhhcCCCceEEecchhhHHHHHHhC
Confidence 45678888888753 33344455666553 56667777765422 2211 112222 5899999994 46899999
Q ss_pred CcceEEeccCcchHHHHHHcCCceeeccCC---CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHH
Q 045998 295 AVSCFLTHCGWNSTLETVAAGVPVIAYPEW---TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNAT 371 (408)
Q Consensus 295 ~v~~fitHgG~~s~~eal~~GvP~i~~P~~---~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~ 371 (408)
++ ||+++|.++++||+++|+|+|+.|.. .||..|+..+.+ .|.|+.+.. ++.+.+++.++|.++ | +
T Consensus 256 d~--~v~~sg~~~~~EAma~G~Pvi~~~~~g~~~~q~~~~~~~~~-~g~g~~~~~---~d~~~~~la~~i~~l--~---~ 324 (364)
T 1f0k_A 256 DV--VVCRSGALTVSEIAAAGLPALFVPFQHKDRQQYWNALPLEK-AGAAKIIEQ---PQLSVDAVANTLAGW--S---R 324 (364)
T ss_dssp SE--EEECCCHHHHHHHHHHTCCEEECCCCCTTCHHHHHHHHHHH-TTSEEECCG---GGCCHHHHHHHHHTC--C---H
T ss_pred CE--EEECCchHHHHHHHHhCCCEEEeeCCCCchhHHHHHHHHHh-CCcEEEecc---ccCCHHHHHHHHHhc--C---H
Confidence 99 99999999999999999999999988 689999999998 899998875 566799999999888 5 4
Q ss_pred HHHHHHH
Q 045998 372 QMKKRAV 378 (408)
Q Consensus 372 ~~~~~a~ 378 (408)
..+++..
T Consensus 325 ~~~~~~~ 331 (364)
T 1f0k_A 325 ETLLTMA 331 (364)
T ss_dssp HHHHHHH
T ss_pred HHHHHHH
Confidence 5554443
No 24
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=98.87 E-value=5.4e-09 Score=97.34 Aligned_cols=115 Identities=14% Similarity=0.041 Sum_probs=88.9
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccHH-HHhcccCc
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQE-KVLMHAAV 296 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq~-~lL~h~~v 296 (408)
.+.|+|++|.... ......++++|.+.. ++.++.+.+... .+.+.+. ...|+.+..++++. ++++.+++
T Consensus 157 ~~~ILv~~GG~d~--~~l~~~vl~~L~~~~-~i~vv~G~~~~~-----~~~l~~~~~~~~~v~v~~~~~~m~~~m~~aDl 228 (282)
T 3hbm_A 157 KYDFFICMGGTDI--KNLSLQIASELPKTK-IISIATSSSNPN-----LKKLQKFAKLHNNIRLFIDHENIAKLMNESNK 228 (282)
T ss_dssp CEEEEEECCSCCT--TCHHHHHHHHSCTTS-CEEEEECTTCTT-----HHHHHHHHHTCSSEEEEESCSCHHHHHHTEEE
T ss_pred CCeEEEEECCCch--hhHHHHHHHHhhcCC-CEEEEECCCchH-----HHHHHHHHhhCCCEEEEeCHHHHHHHHHHCCE
Confidence 4579999997542 235566777776654 577777765321 1222221 12589999999877 69999999
Q ss_pred ceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeec
Q 045998 297 SCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRN 346 (408)
Q Consensus 297 ~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~ 346 (408)
+||+|| +|+.|+++.|+|+|.+|...+|..||+.+++ .|+++.+..
T Consensus 229 --vI~~gG-~T~~E~~~~g~P~i~ip~~~~Q~~nA~~l~~-~G~~~~~~~ 274 (282)
T 3hbm_A 229 --LIISAS-SLVNEALLLKANFKAICYVKNQESTATWLAK-KGYEVEYKY 274 (282)
T ss_dssp --EEEESS-HHHHHHHHTTCCEEEECCSGGGHHHHHHHHH-TTCEEECGG
T ss_pred --EEECCc-HHHHHHHHcCCCEEEEeCCCCHHHHHHHHHH-CCCEEEcch
Confidence 999999 8999999999999999999999999999998 999998864
No 25
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=98.68 E-value=2.9e-07 Score=90.16 Aligned_cols=154 Identities=16% Similarity=0.155 Sum_probs=93.3
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEecCCcccccccchhhhh--hcCCCeEEEeccc---HH
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALIN-----TKRPFLWVIRSQENKEGGVLRAGFLE--ETKDRGLVVKWCS---QE 288 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~-----~~~~~iw~~~~~~~~~~~~lp~~~~~--~~~~n~~v~~w~p---q~ 288 (408)
++++|+++.+-...... .+..+++++.+ .+.++++..+.+. .+-+.+.+ ...+|+.+.++++ ..
T Consensus 229 ~~~~vlv~~hR~~~~~~-~~~~ll~A~~~l~~~~~~~~~v~~~g~~~-----~~~~~l~~~~~~~~~v~~~~~lg~~~~~ 302 (396)
T 3dzc_A 229 SKKLILVTGHRRESFGG-GFERICQALITTAEQHPECQILYPVHLNP-----NVREPVNKLLKGVSNIVLIEPQQYLPFV 302 (396)
T ss_dssp TSEEEEEECSCBCCCTT-HHHHHHHHHHHHHHHCTTEEEEEECCBCH-----HHHHHHHHHTTTCTTEEEECCCCHHHHH
T ss_pred CCCEEEEEECCcccchh-HHHHHHHHHHHHHHhCCCceEEEEeCCCh-----HHHHHHHHHHcCCCCEEEeCCCCHHHHH
Confidence 45677776532222222 24556666554 3566777655431 11111211 1236898887764 44
Q ss_pred HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
.+++.+++ +|+-.| |.+.||.++|+|+|+..-.+++.. +.+ .|.++.+. . +.++|.+++.+++.+
T Consensus 303 ~l~~~ad~--vv~~SG-g~~~EA~a~G~PvV~~~~~~~~~e----~v~-~G~~~lv~-----~-d~~~l~~ai~~ll~d- 367 (396)
T 3dzc_A 303 YLMDRAHI--ILTDSG-GIQEEAPSLGKPVLVMRETTERPE----AVA-AGTVKLVG-----T-NQQQICDALSLLLTD- 367 (396)
T ss_dssp HHHHHCSE--EEESCS-GGGTTGGGGTCCEEECCSSCSCHH----HHH-HTSEEECT-----T-CHHHHHHHHHHHHHC-
T ss_pred HHHHhcCE--EEECCc-cHHHHHHHcCCCEEEccCCCcchH----HHH-cCceEEcC-----C-CHHHHHHHHHHHHcC-
Confidence 78999999 999988 666799999999999755555432 334 58776553 2 689999999999988
Q ss_pred cHHHHHHHHHHHHHHHHHHHhcCCChHHHHH
Q 045998 369 NATQMKKRAVAWKEAAKKALEDGGSSDANIN 399 (408)
Q Consensus 369 ~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~ 399 (408)
+..++++.+-.. ..+.|+++.+-++
T Consensus 368 --~~~~~~m~~~~~----~~~~~~aa~ri~~ 392 (396)
T 3dzc_A 368 --PQAYQAMSQAHN----PYGDGKACQRIAD 392 (396)
T ss_dssp --HHHHHHHHTSCC----TTCCSCHHHHHHH
T ss_pred --HHHHHHHhhccC----CCcCChHHHHHHH
Confidence 555544433222 1255666555444
No 26
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=98.68 E-value=3.3e-07 Score=89.91 Aligned_cols=160 Identities=11% Similarity=0.151 Sum_probs=99.0
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEecCCcccccccchhhhh--hcCCCeEEEecccH---H
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALIN-----TKRPFLWVIRSQENKEGGVLRAGFLE--ETKDRGLVVKWCSQ---E 288 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~-----~~~~~iw~~~~~~~~~~~~lp~~~~~--~~~~n~~v~~w~pq---~ 288 (408)
++++++++.|....... .+..+++++.. .+.++++..+.+.. +-+.+.+ ...+|+.+.+++++ .
T Consensus 223 ~~~~vlv~~~r~~~~~~-~l~~ll~a~~~l~~~~~~~~~v~~~~~~~~-----~~~~l~~~~~~~~~v~l~~~l~~~~~~ 296 (403)
T 3ot5_A 223 DNRLILMTAHRRENLGE-PMQGMFEAVREIVESREDTELVYPMHLNPA-----VREKAMAILGGHERIHLIEPLDAIDFH 296 (403)
T ss_dssp TCEEEEECCCCHHHHTT-HHHHHHHHHHHHHHHCTTEEEEEECCSCHH-----HHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCCEEEEEeCcccccCc-HHHHHHHHHHHHHHhCCCceEEEecCCCHH-----HHHHHHHHhCCCCCEEEeCCCCHHHHH
Confidence 45677787664221111 23445555443 35567776554311 1111111 12368999988864 3
Q ss_pred HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
.+++++++ +|+-.|. .+.||.++|+|+|+.|-.++++. +.+ .|.|+.+. . +.++|.+++.+++.+
T Consensus 297 ~l~~~ad~--vv~~SGg-~~~EA~a~g~PvV~~~~~~~~~e----~v~-~g~~~lv~-----~-d~~~l~~ai~~ll~~- 361 (403)
T 3ot5_A 297 NFLRKSYL--VFTDSGG-VQEEAPGMGVPVLVLRDTTERPE----GIE-AGTLKLIG-----T-NKENLIKEALDLLDN- 361 (403)
T ss_dssp HHHHHEEE--EEECCHH-HHHHGGGTTCCEEECCSSCSCHH----HHH-HTSEEECC-----S-CHHHHHHHHHHHHHC-
T ss_pred HHHHhcCE--EEECCcc-HHHHHHHhCCCEEEecCCCcchh----hee-CCcEEEcC-----C-CHHHHHHHHHHHHcC-
Confidence 68889998 9988753 23699999999999976666654 234 68887764 2 789999999999988
Q ss_pred cHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHH
Q 045998 369 NATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEI 405 (408)
Q Consensus 369 ~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l 405 (408)
+..++++.+-.. ..+.|+++.+-++.+.+.+
T Consensus 362 --~~~~~~m~~~~~----~~g~~~aa~rI~~~l~~~l 392 (403)
T 3ot5_A 362 --KESHDKMAQAAN----PYGDGFAANRILAAIKSHF 392 (403)
T ss_dssp --HHHHHHHHHSCC----TTCCSCHHHHHHHHHHHHH
T ss_pred --HHHHHHHHhhcC----cccCCcHHHHHHHHHHHHh
Confidence 555544432221 2366777777666665544
No 27
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=98.49 E-value=8.5e-05 Score=71.40 Aligned_cols=130 Identities=15% Similarity=0.146 Sum_probs=82.5
Q ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHh--CCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhccc
Q 045998 221 SVIYISFGSLLV-LSQNQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHA 294 (408)
Q Consensus 221 ~vvyvs~GS~~~-~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~ 294 (408)
..+++..|+... -..+.+.+.+..+.+ .+.++++ +|..... ..+ +.+.....+|+.+.+|+|+. .+++.+
T Consensus 198 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~~l~i-~G~g~~~--~~l-~~~~~~~~~~v~~~g~~~~~~~~~~~~~a 273 (394)
T 3okp_A 198 TPVIACNSRLVPRKGQDSLIKAMPQVIAARPDAQLLI-VGSGRYE--STL-RRLATDVSQNVKFLGRLEYQDMINTLAAA 273 (394)
T ss_dssp CCEEEEESCSCGGGCHHHHHHHHHHHHHHSTTCEEEE-ECCCTTH--HHH-HHHTGGGGGGEEEEESCCHHHHHHHHHHC
T ss_pred ceEEEEEeccccccCHHHHHHHHHHHHhhCCCeEEEE-EcCchHH--HHH-HHHHhcccCeEEEcCCCCHHHHHHHHHhC
Confidence 356777788652 223333333333433 2445444 4543221 011 11113345899999999866 478899
Q ss_pred CcceEEe-----------ccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHH
Q 045998 295 AVSCFLT-----------HCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDE 363 (408)
Q Consensus 295 ~v~~fit-----------HgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~ 363 (408)
++ +|. -|.-++++||+++|+|+|+.+.. .....+.+ |.|+.+. .-+.+++.++|.+
T Consensus 274 d~--~v~ps~~~~~~~~~e~~~~~~~Ea~a~G~PvI~~~~~----~~~e~i~~--~~g~~~~-----~~d~~~l~~~i~~ 340 (394)
T 3okp_A 274 DI--FAMPARTRGGGLDVEGLGIVYLEAQACGVPVIAGTSG----GAPETVTP--ATGLVVE-----GSDVDKLSELLIE 340 (394)
T ss_dssp SE--EEECCCCBGGGTBCCSSCHHHHHHHHTTCCEEECSST----TGGGGCCT--TTEEECC-----TTCHHHHHHHHHH
T ss_pred CE--EEecCccccccccccccCcHHHHHHHcCCCEEEeCCC----ChHHHHhc--CCceEeC-----CCCHHHHHHHHHH
Confidence 99 665 44456899999999999997643 34445554 4787775 3478999999999
Q ss_pred HhcC
Q 045998 364 ATQG 367 (408)
Q Consensus 364 vl~~ 367 (408)
++.+
T Consensus 341 l~~~ 344 (394)
T 3okp_A 341 LLDD 344 (394)
T ss_dssp HHTC
T ss_pred HHhC
Confidence 9987
No 28
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=98.47 E-value=1.4e-06 Score=84.95 Aligned_cols=131 Identities=17% Similarity=0.150 Sum_probs=84.3
Q ss_pred CceEEEecCCcccCC-HHHHHHHHHHHHhC----CCCEEEEEecCCcccccccchhh-h-hhcCCCeEEEeccc---HHH
Q 045998 220 SSVIYISFGSLLVLS-QNQIDSIAAALINT----KRPFLWVIRSQENKEGGVLRAGF-L-EETKDRGLVVKWCS---QEK 289 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~-~~~~~~~~~al~~~----~~~~iw~~~~~~~~~~~~lp~~~-~-~~~~~n~~v~~w~p---q~~ 289 (408)
+++|+++.|...... .+.+..+++++.+. +.++|+..+..... .+ +.+ . -...+|+++++.++ ...
T Consensus 203 ~~~iLvt~hr~e~~~~~~~l~~ll~al~~l~~~~~~~vv~p~~p~~~~---~l-~~~~~~~~~~~~v~l~~~lg~~~~~~ 278 (385)
T 4hwg_A 203 KQYFLISSHREENVDVKNNLKELLNSLQMLIKEYNFLIIFSTHPRTKK---RL-EDLEGFKELGDKIRFLPAFSFTDYVK 278 (385)
T ss_dssp TSEEEEEECCC-----CHHHHHHHHHHHHHHHHHCCEEEEEECHHHHH---HH-HTSGGGGGTGGGEEECCCCCHHHHHH
T ss_pred CCEEEEEeCCchhcCcHHHHHHHHHHHHHHHhcCCeEEEEECChHHHH---HH-HHHHHHhcCCCCEEEEcCCCHHHHHH
Confidence 468888887754332 24566677776542 56777765432110 11 111 0 01135788875554 457
Q ss_pred HhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 290 VLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 290 lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
+++++++ +||-.|. .+.||.+.|+|+|.++-..+.+. . .+ .|.++.+. .+.++|.+++.+++.++
T Consensus 279 l~~~adl--vvt~SGg-v~~EA~alG~Pvv~~~~~ter~e---~-v~-~G~~~lv~------~d~~~i~~ai~~ll~d~ 343 (385)
T 4hwg_A 279 LQMNAFC--ILSDSGT-ITEEASILNLPALNIREAHERPE---G-MD-AGTLIMSG------FKAERVLQAVKTITEEH 343 (385)
T ss_dssp HHHHCSE--EEECCTT-HHHHHHHTTCCEEECSSSCSCTH---H-HH-HTCCEECC------SSHHHHHHHHHHHHTTC
T ss_pred HHHhCcE--EEECCcc-HHHHHHHcCCCEEEcCCCccchh---h-hh-cCceEEcC------CCHHHHHHHHHHHHhCh
Confidence 8999999 9999876 47999999999999987554222 2 34 58776663 27899999999999874
No 29
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=98.37 E-value=2.4e-06 Score=73.49 Aligned_cols=128 Identities=13% Similarity=0.175 Sum_probs=85.3
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhC-CCCEEEEEecCCcccccccchhh---hhhcCCCeEEEecccH---HHHhcccC
Q 045998 223 IYISFGSLLVLSQNQIDSIAAALINT-KRPFLWVIRSQENKEGGVLRAGF---LEETKDRGLVVKWCSQ---EKVLMHAA 295 (408)
Q Consensus 223 vyvs~GS~~~~~~~~~~~~~~al~~~-~~~~iw~~~~~~~~~~~~lp~~~---~~~~~~n~~v~~w~pq---~~lL~h~~ 295 (408)
+++..|+... ..-...+++++... +.+++++ +..... ..+-+.. ...+++|+.+.+|+++ ..+++.++
T Consensus 25 ~i~~~G~~~~--~Kg~~~li~a~~~l~~~~l~i~-G~~~~~--~~l~~~~~~~~~~l~~~v~~~g~~~~~e~~~~~~~ad 99 (177)
T 2f9f_A 25 FWLSVNRIYP--EKRIELQLEVFKKLQDEKLYIV-GWFSKG--DHAERYARKIMKIAPDNVKFLGSVSEEELIDLYSRCK 99 (177)
T ss_dssp CEEEECCSSG--GGTHHHHHHHHHHCTTSCEEEE-BCCCTT--STHHHHHHHHHHHSCTTEEEEESCCHHHHHHHHHHCS
T ss_pred EEEEEecccc--ccCHHHHHHHHHhCCCcEEEEE-ecCccH--HHHHHHHHhhhcccCCcEEEeCCCCHHHHHHHHHhCC
Confidence 5566777652 23355667777775 5565554 433221 0221111 1124579999999998 47899999
Q ss_pred cceEEe---ccCcc-hHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 296 VSCFLT---HCGWN-STLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 296 v~~fit---HgG~~-s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
+ +|. +.|++ +++||+++|+|+|+... ..+...+.+ .+.|+.+ . . +.+++.++|.+++++.
T Consensus 100 i--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~-~---~--d~~~l~~~i~~l~~~~ 163 (177)
T 2f9f_A 100 G--LLCTAKDEDFGLTPIEAMASGKPVIAVNE----GGFKETVIN-EKTGYLV-N---A--DVNEIIDAMKKVSKNP 163 (177)
T ss_dssp E--EEECCSSCCSCHHHHHHHHTTCCEEEESS----HHHHHHCCB-TTTEEEE-C---S--CHHHHHHHHHHHHHCT
T ss_pred E--EEeCCCcCCCChHHHHHHHcCCcEEEeCC----CCHHHHhcC-CCccEEe-C---C--CHHHHHHHHHHHHhCH
Confidence 9 665 33444 89999999999999753 456666665 5678777 3 2 6799999999999874
No 30
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=98.18 E-value=4.3e-06 Score=80.52 Aligned_cols=136 Identities=15% Similarity=0.177 Sum_probs=85.9
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccH---H
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALIN-----TKRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQ---E 288 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~-----~~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq---~ 288 (408)
++++|+++.|...... .+..++++++. .+.++++..+.+. .+-+.+.+. ..+++.+.+++++ .
T Consensus 197 ~~~~vl~~~gr~~~~k--~~~~ll~a~~~l~~~~~~~~lv~~~g~~~-----~~~~~l~~~~~~~~~v~~~g~~g~~~~~ 269 (376)
T 1v4v_A 197 EGPYVTVTMHRRENWP--LLSDLAQALKRVAEAFPHLTFVYPVHLNP-----VVREAVFPVLKGVRNFVLLDPLEYGSMA 269 (376)
T ss_dssp SSCEEEECCCCGGGGG--GHHHHHHHHHHHHHHCTTSEEEEECCSCH-----HHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCCEEEEEeCcccchH--HHHHHHHHHHHHHhhCCCeEEEEECCCCH-----HHHHHHHHHhccCCCEEEECCCCHHHHH
Confidence 3456777777553221 23445555443 2455555545432 011122111 1358988855554 4
Q ss_pred HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCC
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGL 368 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~ 368 (408)
.+++.+++ ||+++| |.++||+++|+|+|+.+..+++... .+ .|.|+.+. .+.++|.+++.+++.|
T Consensus 270 ~~~~~ad~--~v~~S~-g~~lEA~a~G~PvI~~~~~~~~~~~----~~-~g~g~lv~------~d~~~la~~i~~ll~d- 334 (376)
T 1v4v_A 270 ALMRASLL--LVTDSG-GLQEEGAALGVPVVVLRNVTERPEG----LK-AGILKLAG------TDPEGVYRVVKGLLEN- 334 (376)
T ss_dssp HHHHTEEE--EEESCH-HHHHHHHHTTCCEEECSSSCSCHHH----HH-HTSEEECC------SCHHHHHHHHHHHHTC-
T ss_pred HHHHhCcE--EEECCc-CHHHHHHHcCCCEEeccCCCcchhh----hc-CCceEECC------CCHHHHHHHHHHHHhC-
Confidence 88999999 999884 4466999999999998876766652 34 57887763 2789999999999987
Q ss_pred cHHHHHHHHH
Q 045998 369 NATQMKKRAV 378 (408)
Q Consensus 369 ~~~~~~~~a~ 378 (408)
+..+++..
T Consensus 335 --~~~~~~~~ 342 (376)
T 1v4v_A 335 --PEELSRMR 342 (376)
T ss_dssp --HHHHHHHH
T ss_pred --hHhhhhhc
Confidence 54444433
No 31
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=98.17 E-value=0.00087 Score=64.58 Aligned_cols=129 Identities=12% Similarity=0.094 Sum_probs=82.4
Q ss_pred eEEEecCCc-cc-CCHHHHHHHHHHHHhC--CCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhccc
Q 045998 222 VIYISFGSL-LV-LSQNQIDSIAAALINT--KRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHA 294 (408)
Q Consensus 222 vvyvs~GS~-~~-~~~~~~~~~~~al~~~--~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~ 294 (408)
.+++..|+. .. -..+.+.+.+..+.+. +.+++ .+|..... .+- .+.++..+|+.+.+++++. .++..+
T Consensus 209 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~l~-i~G~~~~~---~l~-~~~~~~~~~v~~~g~~~~~~~~~~~~~a 283 (406)
T 2gek_A 209 RTVLFLGRYDEPRKGMAVLLAALPKLVARFPDVEIL-IVGRGDED---ELR-EQAGDLAGHLRFLGQVDDATKASAMRSA 283 (406)
T ss_dssp CEEEEESCTTSGGGCHHHHHHHHHHHHTTSTTCEEE-EESCSCHH---HHH-HHTGGGGGGEEECCSCCHHHHHHHHHHS
T ss_pred eEEEEEeeeCccccCHHHHHHHHHHHHHHCCCeEEE-EEcCCcHH---HHH-HHHHhccCcEEEEecCCHHHHHHHHHHC
Confidence 466777887 42 2233333344444432 34443 34543211 221 1112225789999999975 789999
Q ss_pred CcceEEe----ccCc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 295 AVSCFLT----HCGW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 295 ~v~~fit----HgG~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++ +|. +.|+ ++++||+++|+|+|+.+. ......+.+ .+.|+.+. .-+.+++.++|.+++.+
T Consensus 284 dv--~v~ps~~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~i~~-~~~g~~~~-----~~d~~~l~~~i~~l~~~ 349 (406)
T 2gek_A 284 DV--YCAPHLGGESFGIVLVEAMAAGTAVVASDL----DAFRRVLAD-GDAGRLVP-----VDDADGMAAALIGILED 349 (406)
T ss_dssp SE--EEECCCSCCSSCHHHHHHHHHTCEEEECCC----HHHHHHHTT-TTSSEECC-----TTCHHHHHHHHHHHHHC
T ss_pred CE--EEecCCCCCCCchHHHHHHHcCCCEEEecC----CcHHHHhcC-CCceEEeC-----CCCHHHHHHHHHHHHcC
Confidence 99 553 3344 489999999999999755 455666665 56787774 34789999999999987
No 32
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=98.09 E-value=2.7e-05 Score=74.95 Aligned_cols=129 Identities=14% Similarity=0.128 Sum_probs=83.7
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHh-----CCCCEEEEEecCCcccccccchhhhhhc--CCCeEEEecccH---H
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALIN-----TKRPFLWVIRSQENKEGGVLRAGFLEET--KDRGLVVKWCSQ---E 288 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~-----~~~~~iw~~~~~~~~~~~~lp~~~~~~~--~~n~~v~~w~pq---~ 288 (408)
++++++++.|......+ -+..+++++.. .+.++++..+.+. .+.+.+.+.. .+|+.+.+++++ .
T Consensus 204 ~~~~vl~~~gr~~~~~k-g~~~li~a~~~l~~~~~~~~l~i~~g~~~-----~~~~~l~~~~~~~~~v~~~g~~~~~~~~ 277 (384)
T 1vgv_A 204 DKKMILVTGHRRESFGR-GFEEICHALADIATTHQDIQIVYPVHLNP-----NVREPVNRILGHVKNVILIDPQEYLPFV 277 (384)
T ss_dssp TSEEEEEECCCBSSCCH-HHHHHHHHHHHHHHHCTTEEEEEECCBCH-----HHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCCEEEEEeCCccccch-HHHHHHHHHHHHHhhCCCeEEEEEcCCCH-----HHHHHHHHHhhcCCCEEEeCCCCHHHHH
Confidence 35678888887653322 23444444433 2455555444321 0112222111 268999776664 4
Q ss_pred HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
.+++.+++ ||+.+|. .++||+++|+|+|+.+..+.... +.+ .|.|+.+. . +.++|.++|.+++.|
T Consensus 278 ~~~~~ad~--~v~~Sg~-~~lEA~a~G~PvI~~~~~~~~~e----~v~-~g~g~lv~----~--d~~~la~~i~~ll~d 342 (384)
T 1vgv_A 278 WLMNHAWL--ILTDSGG-IQEEAPSLGKPVLVMRDTTERPE----AVT-AGTVRLVG----T--DKQRIVEEVTRLLKD 342 (384)
T ss_dssp HHHHHCSE--EEESSST-GGGTGGGGTCCEEEESSCCSCHH----HHH-HTSEEEEC----S--SHHHHHHHHHHHHHC
T ss_pred HHHHhCcE--EEECCcc-hHHHHHHcCCCEEEccCCCCcch----hhh-CCceEEeC----C--CHHHHHHHHHHHHhC
Confidence 78999999 9998864 48899999999999987544332 344 57888874 2 889999999999987
No 33
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=97.98 E-value=0.0014 Score=63.68 Aligned_cols=145 Identities=12% Similarity=0.124 Sum_probs=87.4
Q ss_pred eEEEecCCcc-c-CCHHHHHHHHHHHHhC----CCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhc
Q 045998 222 VIYISFGSLL-V-LSQNQIDSIAAALINT----KRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLM 292 (408)
Q Consensus 222 vvyvs~GS~~-~-~~~~~~~~~~~al~~~----~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~ 292 (408)
.+++..|+.. . -..+.+-+.+..+.+. +.+++ .+|.........+ ..+.++.++++.+.+|+|+. .+++
T Consensus 252 ~~i~~~G~~~~~~Kg~~~li~a~~~l~~~~~~~~~~l~-i~G~g~~~~~~~l-~~~~~~~~~~~~~~g~~~~~~~~~~~~ 329 (439)
T 3fro_A 252 VTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFI-IIGKGDPELEGWA-RSLEEKHGNVKVITEMLSREFVRELYG 329 (439)
T ss_dssp EEEEEECCSSCTTBCHHHHHHHHHHHHTSGGGGGEEEE-EECCCCHHHHHHH-HHHHHHCTTEEEECSCCCHHHHHHHHT
T ss_pred cEEEEEcccccccccHHHHHHHHHHHHhcccCCCeEEE-EEcCCChhHHHHH-HHHHhhcCCEEEEcCCCCHHHHHHHHH
Confidence 6777788876 3 2345555555555542 33433 3443321100011 22223345445566889986 4688
Q ss_pred ccCcceEEec----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhc-C
Q 045998 293 HAAVSCFLTH----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQ-G 367 (408)
Q Consensus 293 h~~v~~fitH----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~-~ 367 (408)
.+++ +|.- |--++++||+++|+|+|+-.. ......+.. |.|..+. .-+.+++.++|.+++. +
T Consensus 330 ~adv--~v~ps~~e~~~~~~~EAma~G~Pvi~s~~----~~~~e~~~~--~~g~~~~-----~~d~~~la~~i~~ll~~~ 396 (439)
T 3fro_A 330 SVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDIITN--ETGILVK-----AGDPGELANAILKALELS 396 (439)
T ss_dssp TCSE--EEECBSCCSSCHHHHHHHHTTCEEEEESS----THHHHHCCT--TTCEEEC-----TTCHHHHHHHHHHHHHHT
T ss_pred HCCE--EEeCCCCCCccHHHHHHHHCCCCeEEcCC----CCcceeEEc--CceEEeC-----CCCHHHHHHHHHHHHhcC
Confidence 9998 6532 334689999999999999743 344455544 6888875 3478999999999997 5
Q ss_pred C-cHHHHHHHHHHHH
Q 045998 368 L-NATQMKKRAVAWK 381 (408)
Q Consensus 368 ~-~~~~~~~~a~~l~ 381 (408)
+ ....+.+++++..
T Consensus 397 ~~~~~~~~~~~~~~~ 411 (439)
T 3fro_A 397 RSDLSKFRENCKKRA 411 (439)
T ss_dssp TTTTHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 3 2344555555444
No 34
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=97.79 E-value=0.00017 Score=69.01 Aligned_cols=129 Identities=16% Similarity=0.148 Sum_probs=80.7
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhC-----CCCEEEEEecCCcccccccchhhhhhcC--CCeEEEecccHH---
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINT-----KRPFLWVIRSQENKEGGVLRAGFLEETK--DRGLVVKWCSQE--- 288 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~-----~~~~iw~~~~~~~~~~~~lp~~~~~~~~--~n~~v~~w~pq~--- 288 (408)
++++++++.|...... .-+..+++++... +.++++ +..... .+-+.+.+... +|+.+.+++++.
T Consensus 204 ~~~~vl~~~gr~~~~~-K~~~~li~a~~~l~~~~~~~~~i~--~~g~~~---~~~~~~~~~~~~~~~v~~~g~~~~~~~~ 277 (375)
T 3beo_A 204 NNRLVLMTAHRRENLG-EPMRNMFRAIKRLVDKHEDVQVVY--PVHMNP---VVRETANDILGDYGRIHLIEPLDVIDFH 277 (375)
T ss_dssp TSEEEEEECCCGGGTT-HHHHHHHHHHHHHHHHCTTEEEEE--ECCSCH---HHHHHHHHHHTTCTTEEEECCCCHHHHH
T ss_pred CCCeEEEEecccccch-hHHHHHHHHHHHHHhhCCCeEEEE--eCCCCH---HHHHHHHHHhhccCCEEEeCCCCHHHHH
Confidence 4457777788754321 2245555555432 344443 322111 11122222122 689997777654
Q ss_pred HHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 289 KVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 289 ~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
.+++.+++ ||+.+| +.++||+++|+|+|+.+..+... . +.+ .|.|+.+. . +.+++.++|.+++.|
T Consensus 278 ~~~~~ad~--~v~~sg-~~~lEA~a~G~Pvi~~~~~~~~~---e-~v~-~g~g~~v~-----~-d~~~la~~i~~ll~~ 342 (375)
T 3beo_A 278 NVAARSYL--MLTDSG-GVQEEAPSLGVPVLVLRDTTERP---E-GIE-AGTLKLAG-----T-DEETIFSLADELLSD 342 (375)
T ss_dssp HHHHTCSE--EEECCH-HHHHHHHHHTCCEEECSSCCSCH---H-HHH-TTSEEECC-----S-CHHHHHHHHHHHHHC
T ss_pred HHHHhCcE--EEECCC-ChHHHHHhcCCCEEEecCCCCCc---e-eec-CCceEEcC-----C-CHHHHHHHHHHHHhC
Confidence 67899999 998874 45889999999999986434332 2 333 47888773 2 789999999999987
No 35
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=97.77 E-value=0.00038 Score=66.33 Aligned_cols=130 Identities=17% Similarity=0.258 Sum_probs=85.8
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCC----C-EEEEEecCCcccccccchhhhhh--cCCCeEEEecccH-HHHhc
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINTKR----P-FLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQ-EKVLM 292 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~----~-~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq-~~lL~ 292 (408)
..+++..|+... ..-...+++++..... . -++.+|..... .+ ..+.++ ..+|+.+.++..+ ..+++
T Consensus 196 ~~~i~~~G~~~~--~K~~~~li~a~~~l~~~~~~~~~l~i~G~g~~~---~~-~~~~~~~~~~~~v~~~g~~~~~~~~~~ 269 (374)
T 2iw1_A 196 QNLLLQVGSDFG--RKGVDRSIEALASLPESLRHNTLLFVVGQDKPR---KF-EALAEKLGVRSNVHFFSGRNDVSELMA 269 (374)
T ss_dssp CEEEEEECSCTT--TTTHHHHHHHHHTSCHHHHHTEEEEEESSSCCH---HH-HHHHHHHTCGGGEEEESCCSCHHHHHH
T ss_pred CeEEEEeccchh--hcCHHHHHHHHHHhHhccCCceEEEEEcCCCHH---HH-HHHHHHcCCCCcEEECCCcccHHHHHH
Confidence 456677787652 2334556667766432 2 34445553221 22 122222 2478999888654 47899
Q ss_pred ccCcceEEe----ccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 293 HAAVSCFLT----HCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 293 h~~v~~fit----HgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
.+++ +|. -|.-++++||+++|+|+|+.+.. .+...+.+ .+.|+.+. ..-+.+++.++|.+++++
T Consensus 270 ~ad~--~v~ps~~e~~~~~~~Ea~a~G~Pvi~~~~~----~~~e~i~~-~~~g~~~~----~~~~~~~l~~~i~~l~~~ 337 (374)
T 2iw1_A 270 AADL--LLHPAYQEAAGIVLLEAITAGLPVLTTAVC----GYAHYIAD-ANCGTVIA----EPFSQEQLNEVLRKALTQ 337 (374)
T ss_dssp HCSE--EEECCSCCSSCHHHHHHHHHTCCEEEETTS----TTTHHHHH-HTCEEEEC----SSCCHHHHHHHHHHHHHC
T ss_pred hcCE--EEeccccCCcccHHHHHHHCCCCEEEecCC----Cchhhhcc-CCceEEeC----CCCCHHHHHHHHHHHHcC
Confidence 9999 665 45567899999999999997653 34556665 67888885 245789999999999987
No 36
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=97.64 E-value=0.00097 Score=65.12 Aligned_cols=95 Identities=16% Similarity=0.072 Sum_probs=67.5
Q ss_pred CCCeEEEecccHH---HHhcccCcceEEecc---C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCC
Q 045998 276 KDRGLVVKWCSQE---KVLMHAAVSCFLTHC---G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEE 348 (408)
Q Consensus 276 ~~n~~v~~w~pq~---~lL~h~~v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~ 348 (408)
.+|+.+.+|+|+. .+++.+++ ||.-. | -++++||+++|+|+|+.+. ......+.+ .+.|+.+.
T Consensus 305 ~~~v~~~g~~~~~~~~~~~~~adv--~v~ps~~e~~~~~~~Eama~G~PvI~~~~----~~~~e~i~~-~~~g~~~~--- 374 (438)
T 3c48_A 305 EKRIRFLDPRPPSELVAVYRAADI--VAVPSFNESFGLVAMEAQASGTPVIAARV----GGLPIAVAE-GETGLLVD--- 374 (438)
T ss_dssp TTTEEEECCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHHTTCCEEEESC----TTHHHHSCB-TTTEEEES---
T ss_pred CCcEEEcCCCChHHHHHHHHhCCE--EEECccccCCchHHHHHHHcCCCEEecCC----CChhHHhhC-CCcEEECC---
Confidence 4789999999874 67899999 66543 2 4589999999999999764 334555665 56788875
Q ss_pred CCCcCHHHHHHHHHHHhcCCc-HHHHHHHHHHHHH
Q 045998 349 DGTLSIQQVQRCIDEATQGLN-ATQMKKRAVAWKE 382 (408)
Q Consensus 349 ~~~~~~~~l~~~i~~vl~~~~-~~~~~~~a~~l~~ 382 (408)
.-+.+++.++|.+++++++ ...+.+++++..+
T Consensus 375 --~~d~~~la~~i~~l~~~~~~~~~~~~~~~~~~~ 407 (438)
T 3c48_A 375 --GHSPHAWADALATLLDDDETRIRMGEDAVEHAR 407 (438)
T ss_dssp --SCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH
T ss_pred --CCCHHHHHHHHHHHHcCHHHHHHHHHHHHHHHH
Confidence 3478999999999998731 1233444444433
No 37
>4gyw_A UDP-N-acetylglucosamine--peptide N- acetylglucosaminyltransferase 110 kDa subunit...; GT-B, glycosyltransferase, glcnacylation, transferase-peptid; HET: UDP NAG; 1.70A {Homo sapiens} PDB: 3pe3_A* 3pe4_A* 4ay5_A* 4ay6_A* 3tax_A* 4gyy_A* 4gz3_A* 4gz5_A* 4gz6_A*
Probab=97.48 E-value=0.00098 Score=70.03 Aligned_cols=102 Identities=20% Similarity=0.332 Sum_probs=77.5
Q ss_pred CCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhh-c-CCCeEEEecccHHH---Hhc
Q 045998 218 PPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEE-T-KDRGLVVKWCSQEK---VLM 292 (408)
Q Consensus 218 ~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~-~-~~n~~v~~w~pq~~---lL~ 292 (408)
++..|||.||.+....+++.+...++-|++.+--++|..+...... ..+-+.+.+. + ++++.+.+..|..+ .+.
T Consensus 520 p~~~v~f~~fN~~~Ki~p~~~~~W~~IL~~vP~S~L~Ll~~~~~~~-~~l~~~~~~~gi~~~r~~f~~~~~~~~~l~~~~ 598 (723)
T 4gyw_A 520 PEDAIVYCNFNQLYKIDPSTLQMWANILKRVPNSVLWLLRFPAVGE-PNIQQYAQNMGLPQNRIIFSPVAPKEEHVRRGQ 598 (723)
T ss_dssp CTTSEEEECCSCGGGCCHHHHHHHHHHHHHCSSEEEEEEETTGGGH-HHHHHHHHHTTCCGGGEEEEECCCHHHHHHHGG
T ss_pred CCCCEEEEeCCccccCCHHHHHHHHHHHHhCCCCeEEEEeCcHHHH-HHHHHHHHhcCCCcCeEEECCCCCHHHHHHHhC
Confidence 3557999999999999999999999999999999999987653220 0121111111 1 36788888888664 456
Q ss_pred ccCcceEEe---ccCcchHHHHHHcCCceeecc
Q 045998 293 HAAVSCFLT---HCGWNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 293 h~~v~~fit---HgG~~s~~eal~~GvP~i~~P 322 (408)
.+++ |+. .+|.+|+.|||++|||+|.+|
T Consensus 599 ~~Di--~LDt~p~~g~tT~~eal~~GvPvvt~~ 629 (723)
T 4gyw_A 599 LADV--CLDTPLCNGHTTGMDVLWAGTPMVTMP 629 (723)
T ss_dssp GCSE--EECCSSSCCSHHHHHHHHTTCCEEBCC
T ss_pred CCeE--EeCCCCcCCHHHHHHHHHcCCCEEEcc
Confidence 6777 765 889999999999999999998
No 38
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=97.47 E-value=0.0017 Score=62.53 Aligned_cols=131 Identities=14% Similarity=0.095 Sum_probs=78.8
Q ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHh-CCCCEEEEEecCCcccccccchhhhhh--cCCCeEEEecccH-HHHhcccC
Q 045998 221 SVIYISFGSLLV-LSQNQIDSIAAALIN-TKRPFLWVIRSQENKEGGVLRAGFLEE--TKDRGLVVKWCSQ-EKVLMHAA 295 (408)
Q Consensus 221 ~vvyvs~GS~~~-~~~~~~~~~~~al~~-~~~~~iw~~~~~~~~~~~~lp~~~~~~--~~~n~~v~~w~pq-~~lL~h~~ 295 (408)
..+++..|.... -..+.+-+.+..+.+ .+.+ ++.+|..... ..+ ....++ +.+|+.+.++..+ ..+++.++
T Consensus 211 ~~~i~~~G~~~~~Kg~~~li~a~~~l~~~~~~~-l~i~G~g~~~--~~l-~~~~~~~~l~~~v~~~g~~~~~~~~~~~ad 286 (394)
T 2jjm_A 211 EKILIHISNFRKVKRVQDVVQAFAKIVTEVDAK-LLLVGDGPEF--CTI-LQLVKNLHIEDRVLFLGKQDNVAELLAMSD 286 (394)
T ss_dssp -CEEEEECCCCGGGTHHHHHHHHHHHHHSSCCE-EEEECCCTTH--HHH-HHHHHTTTCGGGBCCCBSCSCTHHHHHTCS
T ss_pred CeEEEEeeccccccCHHHHHHHHHHHHhhCCCE-EEEECCchHH--HHH-HHHHHHcCCCCeEEEeCchhhHHHHHHhCC
Confidence 346666788662 222333333333333 3444 3445543221 011 111112 2367777776543 47899999
Q ss_pred cceEE----eccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 296 VSCFL----THCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 296 v~~fi----tHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
+ +| ..|.-++++||+++|+|+|+.+.. .....+.+ .+.|+.+.. -+.+++.++|.+++.+
T Consensus 287 v--~v~ps~~e~~~~~~~EAma~G~PvI~~~~~----~~~e~v~~-~~~g~~~~~-----~d~~~la~~i~~l~~~ 350 (394)
T 2jjm_A 287 L--MLLLSEKESFGLVLLEAMACGVPCIGTRVG----GIPEVIQH-GDTGYLCEV-----GDTTGVADQAIQLLKD 350 (394)
T ss_dssp E--EEECCSCCSCCHHHHHHHHTTCCEEEECCT----TSTTTCCB-TTTEEEECT-----TCHHHHHHHHHHHHHC
T ss_pred E--EEeccccCCCchHHHHHHhcCCCEEEecCC----ChHHHhhc-CCceEEeCC-----CCHHHHHHHHHHHHcC
Confidence 9 76 445567899999999999998653 23344544 457887753 4789999999999987
No 39
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=97.44 E-value=0.002 Score=53.84 Aligned_cols=128 Identities=12% Similarity=0.160 Sum_probs=75.9
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCC--CCE-EEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhccc
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINTK--RPF-LWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHA 294 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~--~~~-iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~ 294 (408)
+++++..|+... ..-...+++++.... ..+ ++.+|..... ..+ ..+.++.+-++.+ +|+|+. .++..+
T Consensus 2 ~~~i~~~G~~~~--~Kg~~~li~a~~~l~~~~~~~l~i~G~g~~~--~~~-~~~~~~~~~~v~~-g~~~~~~~~~~~~~a 75 (166)
T 3qhp_A 2 PFKIAMVGRYSN--EKNQSVLIKAVALSKYKQDIVLLLKGKGPDE--KKI-KLLAQKLGVKAEF-GFVNSNELLEILKTC 75 (166)
T ss_dssp CEEEEEESCCST--TTTHHHHHHHHHTCTTGGGEEEEEECCSTTH--HHH-HHHHHHHTCEEEC-CCCCHHHHHHHHTTC
T ss_pred ceEEEEEeccch--hcCHHHHHHHHHHhccCCCeEEEEEeCCccH--HHH-HHHHHHcCCeEEE-eecCHHHHHHHHHhC
Confidence 457777788763 233555666666642 123 3334443211 012 2222333457788 999875 578899
Q ss_pred CcceEEe----ccCcchHHHHHHcCC-ceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 295 AVSCFLT----HCGWNSTLETVAAGV-PVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 295 ~v~~fit----HgG~~s~~eal~~Gv-P~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++ +|. -|.-.+++||+++|+ |+|+-.. .......+.+ .+. .+ ..-+.+++.++|.+++.+
T Consensus 76 dv--~v~ps~~e~~~~~~~Eama~G~vPvi~~~~---~~~~~~~~~~-~~~--~~-----~~~~~~~l~~~i~~l~~~ 140 (166)
T 3qhp_A 76 TL--YVHAANVESEAIACLEAISVGIVPVIANSP---LSATRQFALD-ERS--LF-----EPNNAKDLSAKIDWWLEN 140 (166)
T ss_dssp SE--EEECCCSCCCCHHHHHHHHTTCCEEEECCT---TCGGGGGCSS-GGG--EE-----CTTCHHHHHHHHHHHHHC
T ss_pred CE--EEECCcccCccHHHHHHHhcCCCcEEeeCC---CCchhhhccC-Cce--EE-----cCCCHHHHHHHHHHHHhC
Confidence 98 664 233458999999996 9999321 2222233333 233 33 234789999999999987
No 40
>2vsy_A XCC0866; transferase, glycosyl transferase, GT-B, OGT, protein O-GLCN; HET: NHE; 2.10A {Xanthomonas campestris PV} PDB: 2jlb_A* 2xgm_A* 2xgo_A* 2xgs_A* 2vsn_A*
Probab=97.42 E-value=0.0024 Score=64.74 Aligned_cols=134 Identities=16% Similarity=0.130 Sum_probs=76.3
Q ss_pred eEEEecCCcc-cCCHHHHHHHHHHHHhCCCCEEEEEe-cCCcccccccchhhhh-hcC-CCeEEEecccHH---HHhccc
Q 045998 222 VIYISFGSLL-VLSQNQIDSIAAALINTKRPFLWVIR-SQENKEGGVLRAGFLE-ETK-DRGLVVKWCSQE---KVLMHA 294 (408)
Q Consensus 222 vvyvs~GS~~-~~~~~~~~~~~~al~~~~~~~iw~~~-~~~~~~~~~lp~~~~~-~~~-~n~~v~~w~pq~---~lL~h~ 294 (408)
+|+. .|... ......++.+...+.+.+.-.++.+| .+... ..+-+...+ .+. +++.+.+++|+. .+++.+
T Consensus 378 ~v~~-~g~~~~K~~~~li~a~~~l~~~~~~~~l~i~G~~g~~~--~~l~~~~~~~~l~~~~v~~~g~~~~~~~~~~~~~a 454 (568)
T 2vsy_A 378 VVLC-CFNNSYKLNPQSMARMLAVLREVPDSVLWLLSGPGEAD--ARLRAFAHAQGVDAQRLVFMPKLPHPQYLARYRHA 454 (568)
T ss_dssp CEEE-ECCCGGGCCHHHHHHHHHHHHHCTTCEEEEECCSTTHH--HHHHHHHHHTTCCGGGEEEECCCCHHHHHHHGGGC
T ss_pred EEEE-eCCccccCCHHHHHHHHHHHHhCCCcEEEEecCCHHHH--HHHHHHHHHcCCChhHEEeeCCCCHHHHHHHHhcC
Confidence 4443 34444 33344455554444444434456666 32211 012111111 123 789999999854 568899
Q ss_pred CcceEEe---ccCcchHHHHHHcCCceeeccCCCChhh-hHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 295 AVSCFLT---HCGWNSTLETVAAGVPVIAYPEWTDQPT-DAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 295 ~v~~fit---HgG~~s~~eal~~GvP~i~~P~~~DQ~~-na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++ ||. +|+-++++||+++|+|+|++|-..=... -+..+.. .|+.-.+. . +.+++.+++.+++.+
T Consensus 455 dv--~v~ps~~~~g~~~lEAma~G~Pvv~~~g~~~~s~~~~~~l~~-~g~~e~v~----~--~~~~la~~i~~l~~~ 522 (568)
T 2vsy_A 455 DL--FLDTHPYNAHTTASDALWTGCPVLTTPGETFAARVAGSLNHH-LGLDEMNV----A--DDAAFVAKAVALASD 522 (568)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEBCCCSSGGGSHHHHHHHH-HTCGGGBC----S--SHHHHHHHHHHHHHC
T ss_pred CE--EeeCCCCCCcHHHHHHHhCCCCEEeccCCCchHHHHHHHHHH-CCChhhhc----C--CHHHHHHHHHHHhcC
Confidence 98 662 2556688999999999999874311111 1222332 34433332 2 789999999999988
No 41
>2x6q_A Trehalose-synthase TRET; biosynthetic protein; 2.20A {Pyrococcus horikoshii} PDB: 2x6r_A 2xa1_A 2xa2_A* 2xa9_A* 2xmp_A*
Probab=97.39 E-value=0.008 Score=58.15 Aligned_cols=78 Identities=14% Similarity=-0.014 Sum_probs=60.4
Q ss_pred CCCeEEEeccc---H---HHHhcccCcceEEecc----CcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEee
Q 045998 276 KDRGLVVKWCS---Q---EKVLMHAAVSCFLTHC----GWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMR 345 (408)
Q Consensus 276 ~~n~~v~~w~p---q---~~lL~h~~v~~fitHg----G~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 345 (408)
.+++.+.+|++ + ..+++.+++ ||.-. .-++++||+++|+|+|+.+. ..+...+.+ .+.|+.+
T Consensus 292 ~~~V~~~G~~~~~~~~~~~~~~~~ad~--~v~ps~~E~~~~~~lEAma~G~PvI~~~~----~g~~e~i~~-~~~g~l~- 363 (416)
T 2x6q_A 292 DYDVKVLTNLIGVHAREVNAFQRASDV--ILQMSIREGFGLTVTEAMWKGKPVIGRAV----GGIKFQIVD-GETGFLV- 363 (416)
T ss_dssp CTTEEEEEGGGTCCHHHHHHHHHHCSE--EEECCSSCSSCHHHHHHHHTTCCEEEESC----HHHHHHCCB-TTTEEEE-
T ss_pred CCcEEEecccCCCCHHHHHHHHHhCCE--EEECCCcCCCccHHHHHHHcCCCEEEccC----CCChhheec-CCCeEEE-
Confidence 47899999876 2 367888998 66544 35688999999999999764 345666665 5678777
Q ss_pred cCCCCCcCHHHHHHHHHHHhcC
Q 045998 346 NEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 346 ~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
. +.+++.++|.+++.+
T Consensus 364 ----~--d~~~la~~i~~ll~~ 379 (416)
T 2x6q_A 364 ----R--DANEAVEVVLYLLKH 379 (416)
T ss_dssp ----S--SHHHHHHHHHHHHHC
T ss_pred ----C--CHHHHHHHHHHHHhC
Confidence 2 779999999999987
No 42
>3q3e_A HMW1C-like glycosyltransferase; N-glycosylation; 2.10A {Actinobacillus pleuropneumoniae serovaorganism_taxid} PDB: 3q3h_A* 3q3i_A
Probab=97.36 E-value=0.0015 Score=66.59 Aligned_cols=137 Identities=9% Similarity=0.053 Sum_probs=88.7
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEE--ecCCcccccccchhhh-hhcCCCeEEEecccHHH---Hhccc
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVI--RSQENKEGGVLRAGFL-EETKDRGLVVKWCSQEK---VLMHA 294 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~--~~~~~~~~~~lp~~~~-~~~~~n~~v~~w~pq~~---lL~h~ 294 (408)
.++|.+|++..+..++.++..++-+.+.+..++|.. +...... ..+-+.+. ..+.+++.+.+.+|+.+ .+..+
T Consensus 441 ~v~Fg~fn~~~Ki~p~~l~~WarIL~~vP~s~L~l~~~g~~~g~~-~~~~~~~~~~GI~~Rv~F~g~~p~~e~la~y~~a 519 (631)
T 3q3e_A 441 VVNIGIASTTMKLNPYFLEALKAIRDRAKVKVHFHFALGQSNGIT-HPYVERFIKSYLGDSATAHPHSPYHQYLRILHNC 519 (631)
T ss_dssp EEEEEEEECSTTCCHHHHHHHHHHHHHCSSEEEEEEEESSCCGGG-HHHHHHHHHHHHGGGEEEECCCCHHHHHHHHHTC
T ss_pred eEEEEECCccccCCHHHHHHHHHHHHhCCCcEEEEEecCCCchhh-HHHHHHHHHcCCCccEEEcCCCCHHHHHHHHhcC
Confidence 689999999999999999999999999888888753 3221110 01111111 12456888888888765 45788
Q ss_pred CcceEEe---ccCcchHHHHHHcCCceeeccCCCChhh-hHHhhhceeeeEEE-eecCCCCCcCHHHHHHHHHHHhcC
Q 045998 295 AVSCFLT---HCGWNSTLETVAAGVPVIAYPEWTDQPT-DAKLLVDVFKIGVR-MRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 295 ~v~~fit---HgG~~s~~eal~~GvP~i~~P~~~DQ~~-na~~v~~~~g~G~~-l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
++ |+. .+|.+|++||+++|||+|+.+-..=.-. -+..+.. .|+.-. +. -+.++..+..-++..|
T Consensus 520 DI--fLDpfpy~GgtTtlEALwmGVPVVTl~G~~~asRvgaSlL~~-~GLpE~LIA------~d~eeYv~~Av~La~D 588 (631)
T 3q3e_A 520 DM--MVNPFPFGNTNGIIDMVTLGLVGVCKTGAEVHEHIDEGLFKR-LGLPEWLIA------NTVDEYVERAVRLAEN 588 (631)
T ss_dssp SE--EECCSSSCCSHHHHHHHHTTCCEEEECCSSHHHHHHHHHHHH-TTCCGGGEE------SSHHHHHHHHHHHHHC
T ss_pred cE--EEeCCcccCChHHHHHHHcCCCEEeccCCcHHHHhHHHHHHh-cCCCcceec------CCHHHHHHHHHHHhCC
Confidence 88 553 3778999999999999999874321111 1222333 454321 22 2567776666678877
No 43
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=97.25 E-value=0.001 Score=62.76 Aligned_cols=128 Identities=12% Similarity=0.060 Sum_probs=80.2
Q ss_pred EEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhcccCcceE
Q 045998 223 IYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHAAVSCF 299 (408)
Q Consensus 223 vyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~~v~~f 299 (408)
+++..|+.. +..-...++++++..+.++++ +|..... ..+ +.+.++.++|+.+.+|+++. .+++.+++-++
T Consensus 164 ~i~~vG~~~--~~Kg~~~li~a~~~~~~~l~i-~G~g~~~--~~l-~~~~~~~~~~v~~~g~~~~~~l~~~~~~adv~v~ 237 (342)
T 2iuy_A 164 FLLFMGRVS--PHKGALEAAAFAHACGRRLVL-AGPAWEP--EYF-DEITRRYGSTVEPIGEVGGERRLDLLASAHAVLA 237 (342)
T ss_dssp CEEEESCCC--GGGTHHHHHHHHHHHTCCEEE-ESCCCCH--HHH-HHHHHHHTTTEEECCCCCHHHHHHHHHHCSEEEE
T ss_pred EEEEEeccc--cccCHHHHHHHHHhcCcEEEE-EeCcccH--HHH-HHHHHHhCCCEEEeccCCHHHHHHHHHhCCEEEE
Confidence 344567765 223345566666666777555 4543221 012 22333445899999999976 78999999332
Q ss_pred Eec-----------cC-cchHHHHHHcCCceeeccCCCChhhhHHhhhce-eeeEEEeecCCCCCcCHHHHHHHHHHHhc
Q 045998 300 LTH-----------CG-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDV-FKIGVRMRNEEDGTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 300 itH-----------gG-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~-~g~G~~l~~~~~~~~~~~~l~~~i~~vl~ 366 (408)
-++ -| -++++||+++|+|+|+.... .+...+.+. -+.|+.+ .. +.+++.++|.+++.
T Consensus 238 ps~~~~~~~~~~~~E~~~~~~~EAma~G~PvI~s~~~----~~~e~~~~~~~~~g~~~-----~~-d~~~l~~~i~~l~~ 307 (342)
T 2iuy_A 238 MSQAVTGPWGGIWCEPGATVVSEAAVSGTPVVGTGNG----CLAEIVPSVGEVVGYGT-----DF-APDEARRTLAGLPA 307 (342)
T ss_dssp CCCCCCCTTCSCCCCCCCHHHHHHHHTTCCEEECCTT----THHHHGGGGEEECCSSS-----CC-CHHHHHHHHHTSCC
T ss_pred CCcccccccccccccCccHHHHHHHhcCCCEEEcCCC----ChHHHhcccCCCceEEc-----CC-CHHHHHHHHHHHHH
Confidence 233 23 35799999999999998753 244444320 1355544 34 88999999998886
No 44
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=97.24 E-value=0.0042 Score=53.50 Aligned_cols=77 Identities=14% Similarity=0.084 Sum_probs=59.2
Q ss_pred CeEE-EecccHH---HHhcccCcceEEecc---C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCC
Q 045998 278 RGLV-VKWCSQE---KVLMHAAVSCFLTHC---G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEED 349 (408)
Q Consensus 278 n~~v-~~w~pq~---~lL~h~~v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 349 (408)
|+.+ .+++++. .+++.+++ +|... | -.+++||+++|+|+|+... ......+ . .+.|+.+..
T Consensus 96 ~v~~~~g~~~~~~~~~~~~~ad~--~l~ps~~e~~~~~~~Ea~a~G~PvI~~~~----~~~~e~~-~-~~~g~~~~~--- 164 (200)
T 2bfw_A 96 NVKVITEMLSREFVRELYGSVDF--VIIPSYFEPFGLVALEAMCLGAIPIASAV----GGLRDII-T-NETGILVKA--- 164 (200)
T ss_dssp TEEEECSCCCHHHHHHHHTTCSE--EEECCSCCSSCHHHHHHHHTTCEEEEESC----HHHHHHC-C-TTTCEEECT---
T ss_pred CEEEEeccCCHHHHHHHHHHCCE--EEECCCCCCccHHHHHHHHCCCCEEEeCC----CChHHHc-C-CCceEEecC---
Confidence 8999 8999854 67889998 66432 3 4578999999999998753 3455555 4 567887753
Q ss_pred CCcCHHHHHHHHHHHhc-C
Q 045998 350 GTLSIQQVQRCIDEATQ-G 367 (408)
Q Consensus 350 ~~~~~~~l~~~i~~vl~-~ 367 (408)
-+.+++.++|.+++. +
T Consensus 165 --~~~~~l~~~i~~l~~~~ 181 (200)
T 2bfw_A 165 --GDPGELANAILKALELS 181 (200)
T ss_dssp --TCHHHHHHHHHHHHHCC
T ss_pred --CCHHHHHHHHHHHHhcC
Confidence 478999999999998 7
No 45
>2r60_A Glycosyl transferase, group 1; rossmann-fold; 1.80A {Halothermothrix orenii} PDB: 2r66_A* 2r68_A*
Probab=97.14 E-value=0.0039 Score=62.11 Aligned_cols=80 Identities=19% Similarity=0.195 Sum_probs=60.8
Q ss_pred CCCeEEEecccHH---HHhccc----CcceEEecc---C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEe
Q 045998 276 KDRGLVVKWCSQE---KVLMHA----AVSCFLTHC---G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRM 344 (408)
Q Consensus 276 ~~n~~v~~w~pq~---~lL~h~----~v~~fitHg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l 344 (408)
.+++.+.+++|+. .+++.+ ++ ||.-. | -++++||+++|+|+|+-.. ......+.+ -+.|+.+
T Consensus 334 ~~~V~~~G~v~~~~~~~~~~~a~~~~dv--~v~pS~~Eg~~~~~lEAma~G~PvI~s~~----~g~~e~v~~-~~~g~l~ 406 (499)
T 2r60_A 334 RGKVSMFPLNSQQELAGCYAYLASKGSV--FALTSFYEPFGLAPVEAMASGLPAVVTRN----GGPAEILDG-GKYGVLV 406 (499)
T ss_dssp BTTEEEEECCSHHHHHHHHHHHHHTTCE--EEECCSCBCCCSHHHHHHHTTCCEEEESS----BHHHHHTGG-GTSSEEE
T ss_pred CceEEECCCCCHHHHHHHHHhcCcCCCE--EEECcccCCCCcHHHHHHHcCCCEEEecC----CCHHHHhcC-CceEEEe
Confidence 5789999999866 578888 88 66322 3 4588999999999999753 344555555 4578887
Q ss_pred ecCCCCCcCHHHHHHHHHHHhcC
Q 045998 345 RNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 345 ~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
. .-+.+++.++|.+++.+
T Consensus 407 ~-----~~d~~~la~~i~~ll~~ 424 (499)
T 2r60_A 407 D-----PEDPEDIARGLLKAFES 424 (499)
T ss_dssp C-----TTCHHHHHHHHHHHHSC
T ss_pred C-----CCCHHHHHHHHHHHHhC
Confidence 5 34789999999999987
No 46
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=97.09 E-value=0.013 Score=56.51 Aligned_cols=75 Identities=9% Similarity=0.044 Sum_probs=52.0
Q ss_pred eEEEecccHH---HHhcccCcceEEe--c--cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeee-----------
Q 045998 279 GLVVKWCSQE---KVLMHAAVSCFLT--H--CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKI----------- 340 (408)
Q Consensus 279 ~~v~~w~pq~---~lL~h~~v~~fit--H--gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~----------- 340 (408)
+.+.+|+|+. .+++.+++ ||. . |.-++++||+++|+|+|+-.. ......+.+ |.
T Consensus 256 v~~~g~~~~~~~~~~~~~adv--~v~pS~~E~~~~~~lEAma~G~PvI~s~~----~g~~e~v~~--~~~~~i~~~~~~~ 327 (413)
T 3oy2_A 256 MINRTVLTDERVDMMYNACDV--IVNCSSGEGFGLCSAEGAVLGKPLIISAV----GGADDYFSG--DCVYKIKPSAWIS 327 (413)
T ss_dssp EEECSCCCHHHHHHHHHHCSE--EEECCSCCSSCHHHHHHHTTTCCEEEECC----HHHHHHSCT--TTSEEECCCEEEE
T ss_pred eeccCcCCHHHHHHHHHhCCE--EEeCCCcCCCCcHHHHHHHcCCCEEEcCC----CChHHHHcc--Ccccccccccccc
Confidence 5666999855 57889998 653 2 224589999999999999653 233333433 22
Q ss_pred -----EE--EeecCCCCCcCHHHHHHHHHHHhcC
Q 045998 341 -----GV--RMRNEEDGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 341 -----G~--~l~~~~~~~~~~~~l~~~i~~vl~~ 367 (408)
|+ .+.. -+.+++.++| +++.+
T Consensus 328 ~~~~~G~~gl~~~-----~d~~~la~~i-~l~~~ 355 (413)
T 3oy2_A 328 VDDRDGIGGIEGI-----IDVDDLVEAF-TFFKD 355 (413)
T ss_dssp CTTTCSSCCEEEE-----CCHHHHHHHH-HHTTS
T ss_pred cccccCcceeeCC-----CCHHHHHHHH-HHhcC
Confidence 44 4432 3889999999 99987
No 47
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=97.09 E-value=0.0033 Score=60.53 Aligned_cols=97 Identities=13% Similarity=0.130 Sum_probs=69.5
Q ss_pred CeEEEeccc-HHHHhcccCcceEEec-----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCC
Q 045998 278 RGLVVKWCS-QEKVLMHAAVSCFLTH-----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGT 351 (408)
Q Consensus 278 n~~v~~w~p-q~~lL~h~~v~~fitH-----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~ 351 (408)
++.+.++.. -..+++.+++ |+.- +|..+++||+++|+|+|+-|-.++.......+.+ .|.++.+.
T Consensus 261 ~v~~~~~~~dl~~~y~~aDv--~vl~ss~~e~gg~~~lEAmA~G~PVI~~~~~~~~~e~~~~~~~-~G~l~~~~------ 331 (374)
T 2xci_A 261 DVILVDRFGILKELYPVGKI--AIVGGTFVNIGGHNLLEPTCWGIPVIYGPYTHKVNDLKEFLEK-EGAGFEVK------ 331 (374)
T ss_dssp SEEECCSSSCHHHHGGGEEE--EEECSSSSSSCCCCCHHHHTTTCCEEECSCCTTSHHHHHHHHH-TTCEEECC------
T ss_pred cEEEECCHHHHHHHHHhCCE--EEECCcccCCCCcCHHHHHHhCCCEEECCCccChHHHHHHHHH-CCCEEEeC------
Confidence 566666543 3478999998 6542 2347899999999999987777776666665554 57776652
Q ss_pred cCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHH
Q 045998 352 LSIQQVQRCIDEATQGLNATQMKKRAVAWKEAA 384 (408)
Q Consensus 352 ~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~ 384 (408)
+.+++.+++.+++.|+....+.+++++..+.-
T Consensus 332 -d~~~La~ai~~ll~d~~r~~mg~~ar~~~~~~ 363 (374)
T 2xci_A 332 -NETELVTKLTELLSVKKEIKVEEKSREIKGCY 363 (374)
T ss_dssp -SHHHHHHHHHHHHHSCCCCCHHHHHHHHHHHH
T ss_pred -CHHHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 56899999999997633456778887766543
No 48
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=96.66 E-value=0.065 Score=52.81 Aligned_cols=130 Identities=8% Similarity=0.088 Sum_probs=78.7
Q ss_pred eEEEecCCcccC-CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeE-EEecccHH--HHhcccCcc
Q 045998 222 VIYISFGSLLVL-SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGL-VVKWCSQE--KVLMHAAVS 297 (408)
Q Consensus 222 vvyvs~GS~~~~-~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~-v~~w~pq~--~lL~h~~v~ 297 (408)
.+++..|..... ..+.+.+.+..+.+.+.++++ +|.........+ +.+.++.++|+. +.++.... .+++.+++
T Consensus 292 ~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~i-vG~g~~~~~~~l-~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv- 368 (485)
T 1rzu_A 292 PLFCVISRLTWQKGIDLMAEAVDEIVSLGGRLVV-LGAGDVALEGAL-LAAASRHHGRVGVAIGYNEPLSHLMQAGCDA- 368 (485)
T ss_dssp CEEEEESCBSTTTTHHHHHTTHHHHHHTTCEEEE-EECBCHHHHHHH-HHHHHHTTTTEEEEESCCHHHHHHHHHHCSE-
T ss_pred eEEEEEccCccccCHHHHHHHHHHHHhcCceEEE-EeCCchHHHHHH-HHHHHhCCCcEEEecCCCHHHHHHHHhcCCE-
Confidence 467777887632 233333334444444555554 454321000011 222233457887 56873332 67999999
Q ss_pred eEEec----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhcee---------eeEEEeecCCCCCcCHHHHHHHHHHH
Q 045998 298 CFLTH----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVF---------KIGVRMRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 298 ~fitH----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~---------g~G~~l~~~~~~~~~~~~l~~~i~~v 364 (408)
||.- |--++++||+++|+|+|+-.. ......+.+ - +.|+.+. .-+.+++.++|.++
T Consensus 369 -~v~pS~~E~~~~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~la~~i~~l 437 (485)
T 1rzu_A 369 -IIIPSRFEPCGLTQLYALRYGCIPVVART----GGLADTVID-ANHAALASKAATGVQFS-----PVTLDGLKQAIRRT 437 (485)
T ss_dssp -EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEES-----SCSHHHHHHHHHHH
T ss_pred -EEECcccCCCCHHHHHHHHCCCCEEEeCC----CChhheecc-cccccccccCCcceEeC-----CCCHHHHHHHHHHH
Confidence 6632 335689999999999999754 345555554 3 5788875 34789999999999
Q ss_pred h
Q 045998 365 T 365 (408)
Q Consensus 365 l 365 (408)
+
T Consensus 438 l 438 (485)
T 1rzu_A 438 V 438 (485)
T ss_dssp H
T ss_pred H
Confidence 9
No 49
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=96.48 E-value=0.078 Score=52.25 Aligned_cols=131 Identities=11% Similarity=0.016 Sum_probs=77.6
Q ss_pred ceEEEecCCccc-CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeE-EEecccHH--HHhcccCc
Q 045998 221 SVIYISFGSLLV-LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGL-VVKWCSQE--KVLMHAAV 296 (408)
Q Consensus 221 ~vvyvs~GS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~-v~~w~pq~--~lL~h~~v 296 (408)
..+++..|.... -..+.+.+.+..+.+.+.+++++ |.........+ +.+.++.++++. +.++.... .+++.+++
T Consensus 292 ~~~i~~vGrl~~~Kg~~~li~a~~~l~~~~~~l~iv-G~g~~~~~~~l-~~~~~~~~~~v~~~~g~~~~~~~~~~~~adv 369 (485)
T 2qzs_A 292 VPLFAVVSRLTSQKGLDLVLEALPGLLEQGGQLALL-GAGDPVLQEGF-LAAAAEYPGQVGVQIGYHEAFSHRIMGGADV 369 (485)
T ss_dssp SCEEEEEEEESGGGCHHHHHHHHHHHHHTTCEEEEE-EEECHHHHHHH-HHHHHHSTTTEEEEESCCHHHHHHHHHHCSE
T ss_pred CeEEEEeccCccccCHHHHHHHHHHHhhCCcEEEEE-eCCchHHHHHH-HHHHHhCCCcEEEeCCCCHHHHHHHHHhCCE
Confidence 346666677652 22333333334444445555544 43321000011 122233457886 66884332 67999999
Q ss_pred ceEEec----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhcee---------eeEEEeecCCCCCcCHHHHHHHHHH
Q 045998 297 SCFLTH----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVF---------KIGVRMRNEEDGTLSIQQVQRCIDE 363 (408)
Q Consensus 297 ~~fitH----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~---------g~G~~l~~~~~~~~~~~~l~~~i~~ 363 (408)
||.- |.-++++||+++|+|+|+-.. ......+.+ - +.|+.+. .-+.+++.++|.+
T Consensus 370 --~v~pS~~E~~g~~~lEAma~G~PvI~s~~----gg~~e~v~~-~~~~~~~~~~~~G~l~~-----~~d~~~la~~i~~ 437 (485)
T 2qzs_A 370 --ILVPSRFEPCGLTQLYGLKYGTLPLVRRT----GGLADTVSD-CSLENLADGVASGFVFE-----DSNAWSLLRAIRR 437 (485)
T ss_dssp --EEECCSCCSSCSHHHHHHHHTCEEEEESS----HHHHHHCCB-CCHHHHHTTCCCBEEEC-----SSSHHHHHHHHHH
T ss_pred --EEECCccCCCcHHHHHHHHCCCCEEECCC----CCccceecc-CccccccccccceEEEC-----CCCHHHHHHHHHH
Confidence 6633 334578999999999999754 345555554 3 5788875 3478999999999
Q ss_pred Hh
Q 045998 364 AT 365 (408)
Q Consensus 364 vl 365 (408)
++
T Consensus 438 ll 439 (485)
T 2qzs_A 438 AF 439 (485)
T ss_dssp HH
T ss_pred HH
Confidence 99
No 50
>3rhz_A GTF3, nucleotide sugar synthetase-like protein; glycosyltransferase, transferase; HET: UDP; 1.90A {Streptococcus parasanguinis} PDB: 3qkw_A*
Probab=96.44 E-value=0.0055 Score=58.22 Aligned_cols=110 Identities=11% Similarity=0.140 Sum_probs=75.1
Q ss_pred CeEEEecccHHHH---hcccCcceEEeccCc---------chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEee
Q 045998 278 RGLVVKWCSQEKV---LMHAAVSCFLTHCGW---------NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMR 345 (408)
Q Consensus 278 n~~v~~w~pq~~l---L~h~~v~~fitHgG~---------~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 345 (408)
|+...+|+|+.++ |+.++.+.+..-+.+ +-+.|++++|+|+|+.+ ...++..+++ .|+|+.++
T Consensus 215 nV~f~G~~~~~el~~~l~~~~~~lv~~~~~~~~y~~~~~P~Kl~eymA~G~PVI~~~----~~~~~~~v~~-~~~G~~~~ 289 (339)
T 3rhz_A 215 NVHKINYRPDEQLLMEMSQGGFGLVWMDDKDKEYQSLYCSYKLGSFLAAGIPVIVQE----GIANQELIEN-NGLGWIVK 289 (339)
T ss_dssp TEEEEECCCHHHHHHHHHTEEEEECCCCGGGHHHHTTCCCHHHHHHHHHTCCEEEET----TCTTTHHHHH-HTCEEEES
T ss_pred CEEEeCCCCHHHHHHHHHhCCEEEEECCCchhHHHHhcChHHHHHHHHcCCCEEEcc----ChhHHHHHHh-CCeEEEeC
Confidence 9999999999865 445555444422222 34789999999999865 4467777887 89999884
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHH
Q 045998 346 NEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINE 404 (408)
Q Consensus 346 ~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~ 404 (408)
+.+++.+++.++.. ++-..+++||++.++.++. |-...+.+.+.+.+
T Consensus 290 -------~~~e~~~~i~~l~~-~~~~~m~~na~~~a~~~~~----~~f~k~~l~~~~~~ 336 (339)
T 3rhz_A 290 -------DVEEAIMKVKNVNE-DEYIELVKNVRSFNPILRK----GFFTRRLLTESVFQ 336 (339)
T ss_dssp -------SHHHHHHHHHHCCH-HHHHHHHHHHHHHTHHHHT----THHHHHHHHHHHHH
T ss_pred -------CHHHHHHHHHHhCH-HHHHHHHHHHHHHHHHhhc----cHHHHHHHHHHHHH
Confidence 35788888877643 2346788899888887743 33344444444433
No 51
>3s28_A Sucrose synthase 1; glycosyltransferase, sucrose metabolism, sugar donar complex rossmann fold, GT-B fold, glycosyltansferase, UDP-glucose; HET: UDP LCN NHF; 2.80A {Arabidopsis thaliana} PDB: 3s27_A* 3s29_A*
Probab=95.20 E-value=0.13 Score=54.39 Aligned_cols=78 Identities=13% Similarity=0.131 Sum_probs=54.0
Q ss_pred CCCeEEEe----cccHHHHhc----ccCcceEEec----cCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEE
Q 045998 276 KDRGLVVK----WCSQEKVLM----HAAVSCFLTH----CGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVR 343 (408)
Q Consensus 276 ~~n~~v~~----w~pq~~lL~----h~~v~~fitH----gG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~ 343 (408)
.+++.+.+ ++|+.++.. .+++ ||.- |--.+++||+++|+|+|+-. -......+.+ -+.|+.
T Consensus 639 ~~~V~flG~~~~~v~~~eL~~~~~~aaDv--fV~PS~~EgfglvllEAMA~G~PVIasd----~GG~~EiV~d-g~~Gll 711 (816)
T 3s28_A 639 NGQFRWISSQMDRVRNGELYRYICDTKGA--FVQPALYEAFGLTVVEAMTCGLPTFATC----KGGPAEIIVH-GKSGFH 711 (816)
T ss_dssp BBBEEEECCCCCHHHHHHHHHHHHHTTCE--EEECCSCBSSCHHHHHHHHTTCCEEEES----SBTHHHHCCB-TTTBEE
T ss_pred CCcEEEccCccccCCHHHHHHHHHhcCeE--EEECCCccCccHHHHHHHHcCCCEEEeC----CCChHHHHcc-CCcEEE
Confidence 47888887 555565544 4567 6643 23458999999999999963 3445555655 567888
Q ss_pred eecCCCCCcCHHHHHHHHHHHh
Q 045998 344 MRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 344 l~~~~~~~~~~~~l~~~i~~vl 365 (408)
++. -+.+++.++|.+++
T Consensus 712 v~p-----~D~e~LA~aI~~lL 728 (816)
T 3s28_A 712 IDP-----YHGDQAADTLADFF 728 (816)
T ss_dssp ECT-----TSHHHHHHHHHHHH
T ss_pred eCC-----CCHHHHHHHHHHHH
Confidence 853 47888999997766
No 52
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=95.02 E-value=0.11 Score=50.49 Aligned_cols=78 Identities=14% Similarity=0.070 Sum_probs=56.9
Q ss_pred CCeEEEecccHH---HHhcccCcceEEecc---Cc-chHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCCC
Q 045998 277 DRGLVVKWCSQE---KVLMHAAVSCFLTHC---GW-NSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEED 349 (408)
Q Consensus 277 ~n~~v~~w~pq~---~lL~h~~v~~fitHg---G~-~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~ 349 (408)
.|+.+.+++|+. .+++.+++ ||.-. |. +.++||+++|+|+|+ -..+ ....+.+ -..|+.+.
T Consensus 295 ~~v~f~G~~~~~~l~~~~~~adv--~v~pS~~E~~g~~~lEAmA~G~PVV~-~~~g----~~e~v~~-~~~G~lv~---- 362 (413)
T 2x0d_A 295 IHLNSLGKLTLEDYADLLKRSSI--GISLMISPHPSYPPLEMAHFGLRVIT-NKYE----NKDLSNW-HSNIVSLE---- 362 (413)
T ss_dssp EEEEEEESCCHHHHHHHHHHCCE--EECCCSSSSCCSHHHHHHHTTCEEEE-ECBT----TBCGGGT-BTTEEEES----
T ss_pred CcEEEcCCCCHHHHHHHHHhCCE--EEEecCCCCCCcHHHHHHhCCCcEEE-eCCC----cchhhhc-CCCEEEeC----
Confidence 678888999876 57889999 66421 33 467999999999998 3322 1234444 34788775
Q ss_pred CCcCHHHHHHHHHHHhcC
Q 045998 350 GTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 350 ~~~~~~~l~~~i~~vl~~ 367 (408)
.-+.+++.++|.++++|
T Consensus 363 -~~d~~~la~ai~~ll~~ 379 (413)
T 2x0d_A 363 -QLNPENIAETLVELCMS 379 (413)
T ss_dssp -SCSHHHHHHHHHHHHHH
T ss_pred -CCCHHHHHHHHHHHHcC
Confidence 34789999999999987
No 53
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=94.84 E-value=0.21 Score=48.18 Aligned_cols=114 Identities=15% Similarity=0.064 Sum_probs=74.5
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHh--CCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhcccCc
Q 045998 222 VIYISFGSLLVLSQNQIDSIAAALIN--TKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHAAV 296 (408)
Q Consensus 222 vvyvs~GS~~~~~~~~~~~~~~al~~--~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~~v 296 (408)
.+++..|+... .+.. +..+.+ .+.+++ .+|.+... .+ ...+|+.+.+++|+. .+++.+++
T Consensus 223 ~~i~~vGrl~~-~Kg~----~~~l~~~~~~~~l~-ivG~g~~~---~~------~l~~~V~f~G~~~~~~l~~~~~~adv 287 (406)
T 2hy7_A 223 IHAVAVGSMLF-DPEF----FVVASKAFPQVTFH-VIGSGMGR---HP------GYGDNVIVYGEMKHAQTIGYIKHARF 287 (406)
T ss_dssp EEEEEECCTTB-CHHH----HHHHHHHCTTEEEE-EESCSSCC---CT------TCCTTEEEECCCCHHHHHHHHHTCSE
T ss_pred cEEEEEecccc-ccCH----HHHHHHhCCCeEEE-EEeCchHH---hc------CCCCCEEEcCCCCHHHHHHHHHhcCE
Confidence 56677788764 3333 333333 233443 34543211 11 234899999999875 57889998
Q ss_pred ceEEe---ccC-cchHHHHH-------HcCCceeeccCCCChhhhHHhhhceeeeEEE-eecCCCCCcCHHHHHHHHHHH
Q 045998 297 SCFLT---HCG-WNSTLETV-------AAGVPVIAYPEWTDQPTDAKLLVDVFKIGVR-MRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 297 ~~fit---HgG-~~s~~eal-------~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~-l~~~~~~~~~~~~l~~~i~~v 364 (408)
||. +-| -++++||+ ++|+|+|+-.. +.+ -..|.. +. .-+.+++.++|.++
T Consensus 288 --~v~ps~~E~~~~~~lEAm~Kl~eYla~G~PVIas~~----------v~~-~~~G~l~v~-----~~d~~~la~ai~~l 349 (406)
T 2hy7_A 288 --GIAPYASEQVPVYLADSSMKLLQYDFFGLPAVCPNA----------VVG-PYKSRFGYT-----PGNADSVIAAITQA 349 (406)
T ss_dssp --EECCBSCSCCCTTHHHHCHHHHHHHHHTCCEEEEGG----------GTC-SCSSEEEEC-----TTCHHHHHHHHHHH
T ss_pred --EEECCCcccCchHHHHHHHHHHHHhhCCCcEEEehh----------ccc-CcceEEEeC-----CCCHHHHHHHHHHH
Confidence 553 233 45689999 99999999754 554 456776 64 34789999999999
Q ss_pred hcCC
Q 045998 365 TQGL 368 (408)
Q Consensus 365 l~~~ 368 (408)
++++
T Consensus 350 l~~~ 353 (406)
T 2hy7_A 350 LEAP 353 (406)
T ss_dssp HHCC
T ss_pred HhCc
Confidence 9874
No 54
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=92.01 E-value=0.41 Score=45.27 Aligned_cols=96 Identities=11% Similarity=0.158 Sum_probs=61.7
Q ss_pred CCceEEEecCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEE-Eecc--c-HHHHh
Q 045998 219 PSSVIYISFGSLL---VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLV-VKWC--S-QEKVL 291 (408)
Q Consensus 219 ~~~vvyvs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v-~~w~--p-q~~lL 291 (408)
++++|.+..|+.. ..+.+.+.++++.|.+.+.++++ ++..... .+-+.+.+..+.+... .+-. . -.+++
T Consensus 184 ~~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl-~g~~~e~---~~~~~i~~~~~~~~~~l~g~~sl~e~~ali 259 (349)
T 3tov_A 184 TDILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVF-FGGPMDL---EMVQPVVEQMETKPIVATGKFQLGPLAAAM 259 (349)
T ss_dssp TCCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEE-CCCTTTH---HHHHHHHHTCSSCCEECTTCCCHHHHHHHH
T ss_pred CCCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEE-EeCcchH---HHHHHHHHhcccccEEeeCCCCHHHHHHHH
Confidence 4578889988854 45788899999999877888876 4433221 2222333333344332 2222 2 33789
Q ss_pred cccCcceEEeccCcchHHHHHHcCCceeec
Q 045998 292 MHAAVSCFLTHCGWNSTLETVAAGVPVIAY 321 (408)
Q Consensus 292 ~h~~v~~fitHgG~~s~~eal~~GvP~i~~ 321 (408)
+++++ +|+.-... ++=|.+.|+|+|++
T Consensus 260 ~~a~~--~i~~DsG~-~HlAaa~g~P~v~l 286 (349)
T 3tov_A 260 NRCNL--LITNDSGP-MHVGISQGVPIVAL 286 (349)
T ss_dssp HTCSE--EEEESSHH-HHHHHTTTCCEEEE
T ss_pred HhCCE--EEECCCCH-HHHHHhcCCCEEEE
Confidence 99999 99984333 33377899999997
No 55
>3vue_A GBSS-I, granule-bound starch synthase 1, chloroplastic/amyloplastic; rossmann fold, glycosyltransferase, transferase; 2.70A {Oryza sativa japonica group} PDB: 3vuf_A*
Probab=91.36 E-value=4.2 Score=40.67 Aligned_cols=135 Identities=13% Similarity=0.106 Sum_probs=75.2
Q ss_pred EEEecCCccc-CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH---HHhcccCcce
Q 045998 223 IYISFGSLLV-LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE---KVLMHAAVSC 298 (408)
Q Consensus 223 vyvs~GS~~~-~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~---~lL~h~~v~~ 298 (408)
+++..|.... -..+.+.+.+..|.+.+.+++++....... . ..-.....+.+.++.+..+.+.. .+++.+++
T Consensus 329 ~i~~vgRl~~~Kg~~~li~a~~~l~~~~~~l~l~G~G~~~~-~-~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~aD~-- 404 (536)
T 3vue_A 329 LIAFIGRLEEQKGPDVMAAAIPELMQEDVQIVLLGTGKKKF-E-KLLKSMEEKYPGKVRAVVKFNAPLAHLIMAGADV-- 404 (536)
T ss_dssp EEEEECCBSGGGCHHHHHHHHHHHTTSSCEEEEECCBCHHH-H-HHHHHHHHHSTTTEEEECSCCHHHHHHHHHHCSE--
T ss_pred EEEEEeeccccCChHHHHHHHHHhHhhCCeEEEEeccCchH-H-HHHHHHHhhcCCceEEEEeccHHHHHHHHHhhhe--
Confidence 4455677652 222333333333444566665543222111 0 00112233456888888777664 57888998
Q ss_pred EEecc---C-cchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeEEEeecCC-C----CCcCHHHHHHHHHHHhc
Q 045998 299 FLTHC---G-WNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEE-D----GTLSIQQVQRCIDEATQ 366 (408)
Q Consensus 299 fitHg---G-~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~-~----~~~~~~~l~~~i~~vl~ 366 (408)
||.-. | -.+++||+++|+|.|+-.. .-....|.+ -..|....... + ...+.++|.++|++++.
T Consensus 405 ~v~PS~~E~fgl~~lEAma~G~PvI~s~~----gG~~e~V~d-g~~G~~~~~~~~~g~l~~~~d~~~la~ai~ral~ 476 (536)
T 3vue_A 405 LAVPSRFEPCGLIQLQGMRYGTPCACAST----GGLVDTVIE-GKTGFHMGRLSVDCKVVEPSDVKKVAATLKRAIK 476 (536)
T ss_dssp EEECCSCCSSCSHHHHHHHTTCCEEECSC----THHHHHCCB-TTTEEECCCCCSCTTCCCHHHHHHHHHHHHHHHH
T ss_pred eecccccCCCCHHHHHHHHcCCCEEEcCC----CCchheeeC-CCCccccccCCCceeEECCCCHHHHHHHHHHHHH
Confidence 76532 2 2488999999999999654 334444554 44565443210 0 22356889999988775
No 56
>1psw_A ADP-heptose LPS heptosyltransferase II; structural genomics, NYSGXRC, LPS biosynthetic pathway, PSI, protein structure initiative; 2.00A {Escherichia coli} SCOP: c.87.1.7
Probab=88.74 E-value=1.5 Score=40.77 Aligned_cols=96 Identities=11% Similarity=0.056 Sum_probs=60.5
Q ss_pred CCceEEEecCC-c-c--cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcC----CCeEE-Eeccc---
Q 045998 219 PSSVIYISFGS-L-L--VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETK----DRGLV-VKWCS--- 286 (408)
Q Consensus 219 ~~~vvyvs~GS-~-~--~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~----~n~~v-~~w~p--- 286 (408)
++++|.+.-|| . . ..+.+.+.++++.|.+.+.++++. +..... .+-+.+.+..+ .++.. .+..+
T Consensus 179 ~~~~i~l~pga~~~~~k~wp~~~~~~l~~~L~~~~~~vvl~-g~~~e~---~~~~~i~~~~~~~~~~~~~~l~g~~sl~e 254 (348)
T 1psw_A 179 ERPMIGFCPGAEFGPAKRWPHYHYAELAKQLIDEGYQVVLF-GSAKDH---EAGNEILAALNTEQQAWCRNLAGETQLDQ 254 (348)
T ss_dssp SSCEEEEECCCTTCGGGSCCHHHHHHHHHHHHHTTCEEEEC-CCGGGH---HHHHHHHTTSCHHHHTTEEECTTTSCHHH
T ss_pred CCcEEEEECCCCccccCCCCHHHHHHHHHHHHHCCCeEEEE-eChhhH---HHHHHHHHhhhhccccceEeccCcCCHHH
Confidence 45688888888 3 2 457788999999998778887764 332111 11122222221 23322 23222
Q ss_pred HHHHhcccCcceEEeccCcchHHHHHHcCCceeec
Q 045998 287 QEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAY 321 (408)
Q Consensus 287 q~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~ 321 (408)
-.++++++++ +|+.- .|.++-|.+.|+|+|++
T Consensus 255 ~~ali~~a~l--~I~~D-sg~~HlAaa~g~P~v~l 286 (348)
T 1psw_A 255 AVILIAACKA--IVTND-SGLMHVAAALNRPLVAL 286 (348)
T ss_dssp HHHHHHTSSE--EEEES-SHHHHHHHHTTCCEEEE
T ss_pred HHHHHHhCCE--EEecC-CHHHHHHHHcCCCEEEE
Confidence 2478999999 99974 34566688899999986
No 57
>2gt1_A Lipopolysaccharide heptosyltransferase-1; GT-B fold; 1.90A {Escherichia coli UTI89} PDB: 2h1f_A* 2h1h_A*
Probab=86.42 E-value=1.1 Score=41.50 Aligned_cols=137 Identities=14% Similarity=0.034 Sum_probs=78.3
Q ss_pred CCceEEEecCCcc---cCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEec--cc-HHHHhc
Q 045998 219 PSSVIYISFGSLL---VLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKW--CS-QEKVLM 292 (408)
Q Consensus 219 ~~~vvyvs~GS~~---~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w--~p-q~~lL~ 292 (408)
+++.|.+..|+.. ..+.+.+.++++.|.+.+.++++..+..... .+-+.+.+.. .++.+.+- +. -.++++
T Consensus 177 ~~~~i~l~pga~~~~k~wp~~~~~~l~~~L~~~~~~vvl~~g~~~e~---~~~~~i~~~~-~~~~l~g~~sl~el~ali~ 252 (326)
T 2gt1_A 177 AGEYAVFLHATTRDDKHWPEEHWRELIGLLADSGIRIKLPWGAPHEE---ERAKRLAEGF-AYVEVLPKMSLEGVARVLA 252 (326)
T ss_dssp TTSEEEEECCCSSGGGSCCHHHHHHHHHHTTTTCCEEEECCSSHHHH---HHHHHHHTTC-TTEEECCCCCHHHHHHHHH
T ss_pred CCCEEEEEeCCCCccccCCHHHHHHHHHHHHHCCCcEEEecCCHHHH---HHHHHHHhhC-CcccccCCCCHHHHHHHHH
Confidence 3567888888755 4577889999999887788777654432111 1112222222 24434332 22 337899
Q ss_pred ccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhHHhhhceeeeE-EEeecC-C-CCCcCHHHHHHHHHHHhcC
Q 045998 293 HAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDAKLLVDVFKIG-VRMRNE-E-DGTLSIQQVQRCIDEATQG 367 (408)
Q Consensus 293 h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na~~v~~~~g~G-~~l~~~-~-~~~~~~~~l~~~i~~vl~~ 367 (408)
++++ +|+.-....-+ |.+.|+|+|++=-..+-..++- +|-. ..+... . =..++.+++.+++++++.+
T Consensus 253 ~a~l--~I~~DSG~~Hl-Aaa~g~P~v~lfg~t~p~~~~P-----~~~~~~~~~~~~~cm~~I~~~~V~~~i~~~l~~ 322 (326)
T 2gt1_A 253 GAKF--VVSVDTGLSHL-TAALDRPNITVYGPTDPGLIGG-----YGKNQMVCRAPGNELSQLTANAVKQFIEENAEK 322 (326)
T ss_dssp TCSE--EEEESSHHHHH-HHHTTCCEEEEESSSCHHHHCC-----CSSSEEEEECGGGCGGGCCHHHHHHHHHHTTTT
T ss_pred hCCE--EEecCCcHHHH-HHHcCCCEEEEECCCChhhcCC-----CCCCceEecCCcccccCCCHHHHHHHHHHHHHH
Confidence 9999 99994333333 5568999999811122111111 1111 111110 0 1478899999999998864
No 58
>3t5t_A Putative glycosyltransferase; GTB fold, pseudoglycosyltransferase; 1.70A {Streptomyces hygroscopicus} PDB: 4f97_A* 4f96_B* 4f9f_A* 3t7d_A*
Probab=79.01 E-value=17 Score=35.86 Aligned_cols=110 Identities=14% Similarity=0.096 Sum_probs=72.1
Q ss_pred CeEEEecccHH---HHhcccCcceEEe---ccCcchH-HHHHHcC---CceeeccCCCChhhhHHhhhceeeeEEEeecC
Q 045998 278 RGLVVKWCSQE---KVLMHAAVSCFLT---HCGWNST-LETVAAG---VPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNE 347 (408)
Q Consensus 278 n~~v~~w~pq~---~lL~h~~v~~fit---HgG~~s~-~eal~~G---vP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~ 347 (408)
.+.+...+|+. +++..+++ |+. +=|+|-+ +|++++| .|.|+--+.+ .+..+.+ .|+.++
T Consensus 353 ~V~f~g~v~~~el~aly~~ADv--~vv~SlrEGfgLv~~EamA~~~~~g~lVlSe~aG----a~~~l~~---~allVn-- 421 (496)
T 3t5t_A 353 TVRIDNDNDVNHTIACFRRADL--LIFNSTVDGQNLSTFEAPLVNERDADVILSETCG----AAEVLGE---YCRSVN-- 421 (496)
T ss_dssp SEEEEECCCHHHHHHHHHHCSE--EEECCSSBSCCSHHHHHHHHCSSCCEEEEETTBT----THHHHGG---GSEEEC--
T ss_pred CEEEeCCCCHHHHHHHHHhccE--EEECcccccCChhHHHHHHhCCCCCCEEEeCCCC----CHHHhCC---CEEEEC--
Confidence 57777778875 56778888 553 4588865 8999996 5665543333 1222211 467775
Q ss_pred CCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 348 EDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 348 ~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
..+.+++.++|.++|+... +.-+++.+++.+.+++ -......++|++.|..
T Consensus 422 ---P~D~~~lA~AI~~aL~m~~-~er~~r~~~~~~~V~~-----~d~~~W~~~fl~~L~~ 472 (496)
T 3t5t_A 422 ---PFDLVEQAEAISAALAAGP-RQRAEAAARRRDAARP-----WTLEAWVQAQLDGLAA 472 (496)
T ss_dssp ---TTBHHHHHHHHHHHHHCCH-HHHHHHHHHHHHHHTT-----CBHHHHHHHHHHHHHH
T ss_pred ---CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHH-----CCHHHHHHHHHHHHhh
Confidence 4588999999999998631 3345555555555433 5678888999988853
No 59
>1uqt_A Alpha, alpha-trehalose-phosphate synthase; glycosyltransferase, transferase; HET: U2F; 2.0A {Escherichia coli} SCOP: c.87.1.6 PDB: 1uqu_A* 2wtx_A* 1gz5_A*
Probab=78.84 E-value=14 Score=36.31 Aligned_cols=108 Identities=17% Similarity=0.090 Sum_probs=67.0
Q ss_pred eEE-EecccHH---HHhcccCcceEEe---ccCcc-hHHHHHHcCC-----ceeeccCCCChhhhHHhhhceeeeEEEee
Q 045998 279 GLV-VKWCSQE---KVLMHAAVSCFLT---HCGWN-STLETVAAGV-----PVIAYPEWTDQPTDAKLLVDVFKIGVRMR 345 (408)
Q Consensus 279 ~~v-~~w~pq~---~lL~h~~v~~fit---HgG~~-s~~eal~~Gv-----P~i~~P~~~DQ~~na~~v~~~~g~G~~l~ 345 (408)
+.. .+.+++. ++++.+++ |+. .=|+| +++||+++|+ |+|+--+.+ .+..+ ..|+.++
T Consensus 333 v~~~~g~v~~~el~~ly~~ADv--~v~pS~~EGfgLv~lEAmA~g~~~~~gpvV~S~~~G----~~~~l----~~g~lv~ 402 (482)
T 1uqt_A 333 LYYLNQHFDRKLLMKIFRYSDV--GLVTPLRDGMNLVAKEYVAAQDPANPGVLVLSQFAG----AANEL----TSALIVN 402 (482)
T ss_dssp EEEECSCCCHHHHHHHHHHCSE--EEECCSSBSCCHHHHHHHHHSCTTSCCEEEEETTBG----GGGTC----TTSEEEC
T ss_pred EEEeCCCCCHHHHHHHHHHccE--EEECCCcccCCchHHHHHHhCCCCCCCCEEEECCCC----CHHHh----CCeEEEC
Confidence 443 4778877 56888998 664 33665 7799999998 666654322 11112 2456664
Q ss_pred cCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHh
Q 045998 346 NEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEITR 407 (408)
Q Consensus 346 ~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~ 407 (408)
..+.+++.++|.+++++++ +.-++..++.++.+++ -+.....++|++.+.+
T Consensus 403 -----p~d~~~lA~ai~~lL~~~~-~~r~~~~~~~~~~v~~-----~s~~~~a~~~l~~l~~ 453 (482)
T 1uqt_A 403 -----PYDRDEVAAALDRALTMSL-AERISRHAEMLDVIVK-----NDINHWQECFISDLKQ 453 (482)
T ss_dssp -----TTCHHHHHHHHHHHHTCCH-HHHHHHHHHHHHHHHH-----TCHHHHHHHHHHHHHH
T ss_pred -----CCCHHHHHHHHHHHHcCCH-HHHHHHHHHHHHHHHh-----CCHHHHHHHHHHHHHh
Confidence 3578999999999998531 2233344444444332 3567777788777653
No 60
>3nb0_A Glycogen [starch] synthase isoform 2; glycogen synthase, glucose-6-phosphate, yeast, allosteric AC transferase; HET: G6P; 2.41A {Saccharomyces cerevisiae} PDB: 3rt1_A* 3nch_A 3naz_A 3o3c_A* 3rsz_A*
Probab=75.11 E-value=3.5 Score=42.45 Aligned_cols=47 Identities=17% Similarity=0.269 Sum_probs=34.7
Q ss_pred CCCeEEE---ecccH---------HHHhcccCcceEEecc---Cc-chHHHHHHcCCceeeccCC
Q 045998 276 KDRGLVV---KWCSQ---------EKVLMHAAVSCFLTHC---GW-NSTLETVAAGVPVIAYPEW 324 (408)
Q Consensus 276 ~~n~~v~---~w~pq---------~~lL~h~~v~~fitHg---G~-~s~~eal~~GvP~i~~P~~ 324 (408)
.++++|+ .|++. .++++.+++ ||.-. |+ .+++||+++|+|.|+--..
T Consensus 489 ~drVKVIf~P~~L~~~d~lf~~d~~~~~~~adv--fV~PS~~EgfGl~~LEAmA~G~PvI~s~~g 551 (725)
T 3nb0_A 489 SDRVKMIFHPEFLNANNPILGLDYDEFVRGCHL--GVFPSYYEPWGYTPAECTVMGVPSITTNVS 551 (725)
T ss_dssp TCSEEEEECCSCCCTTCSSSCCCHHHHHHHCSE--EECCCSSBSSCHHHHHHHHTTCCEEEETTB
T ss_pred CCceeEEEeccccCCCCccchhHHHHHHhhceE--EEeccccCCCCHHHHHHHHcCCCEEEeCCC
Confidence 3666665 78876 468999999 66432 33 4889999999999996543
No 61
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=69.45 E-value=38 Score=28.24 Aligned_cols=45 Identities=16% Similarity=0.104 Sum_probs=29.7
Q ss_pred EEEecccHH-HHhcccCcceEEeccCcchHHH---HHHcCCceeeccCC
Q 045998 280 LVVKWCSQE-KVLMHAAVSCFLTHCGWNSTLE---TVAAGVPVIAYPEW 324 (408)
Q Consensus 280 ~v~~w~pq~-~lL~h~~v~~fitHgG~~s~~e---al~~GvP~i~~P~~ 324 (408)
.+++..++. .++..-+-..++--||.||+.| ++.+++|++.+|.+
T Consensus 92 i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~~~kpV~~l~~~ 140 (176)
T 2iz6_A 92 IVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALKAKKPVVLLGTQ 140 (176)
T ss_dssp EECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHHTTCCEEEESCC
T ss_pred EEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHHhCCcEEEEcCc
Confidence 344555655 3443333345667788887655 56799999999983
No 62
>4b4k_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase; 2.50A {Bacillus anthracis}
Probab=55.19 E-value=92 Score=26.00 Aligned_cols=143 Identities=13% Similarity=0.137 Sum_probs=79.7
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceE
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCF 299 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~f 299 (408)
++.|-|-+||.. +....++..+.|++.+..+-..+-...+ .|+.+.+- + .-.....+++|
T Consensus 22 kp~V~IimGS~S--D~~v~~~a~~~L~~~gI~~e~~V~SAHR-----tp~~l~~~----------~---~~a~~~g~~Vi 81 (181)
T 4b4k_A 22 KSLVGVIMGSTS--DWETMKYACDILDELNIPYEKKVVSAHR-----TPDYMFEY----------A---ETARERGLKVI 81 (181)
T ss_dssp CCSEEEEESSGG--GHHHHHHHHHHHHHTTCCEEEEECCTTT-----SHHHHHHH----------H---HHTTTTTCCEE
T ss_pred CccEEEEECCHh--HHHHHHHHHHHHHHcCCCeeEEEEcccc-----ChHHHHHH----------H---HHHHhcCceEE
Confidence 467888899987 4577888999999999887665554443 24332210 0 00112233447
Q ss_pred EeccCcc----hHHHHHHcCCceeeccCCCCh---hhhHHhhhceeeeEEEeecCCCCCcC---HHHHHHHHHHHhc--C
Q 045998 300 LTHCGWN----STLETVAAGVPVIAYPEWTDQ---PTDAKLLVDVFKIGVRMRNEEDGTLS---IQQVQRCIDEATQ--G 367 (408)
Q Consensus 300 itHgG~~----s~~eal~~GvP~i~~P~~~DQ---~~na~~v~~~~g~G~~l~~~~~~~~~---~~~l~~~i~~vl~--~ 367 (408)
|.=.|.- ++..+ ..-.|+|++|..... .+...-+.+ .--|+-+-. -.+. ...-.-.--++|. |
T Consensus 82 Ia~AG~aahLpGvvAa-~T~~PVIGVPv~s~~l~G~DsLlSivQ-MP~GvpVaT---vaig~~ga~NAallA~qILa~~d 156 (181)
T 4b4k_A 82 IAGAGGAAHLPGMVAA-KTNLPVIGVPVQSKALNGLDSLLSIVQ-MPGGVPVAT---VAIGKAGSTNAGLLAAQILGSFH 156 (181)
T ss_dssp EEEECSSCCHHHHHHT-TCCSCEEEEECCCTTTTTHHHHHHHHT-CCTTCCCEE---CCSSHHHHHHHHHHHHHHHTTTC
T ss_pred EEeccccccchhhHHh-cCCCCEEEEecCCCCccchhhHHHHHh-CCCCCceEE---EecCCccHHHHHHHHHHHHccCC
Confidence 7777644 44433 456899999996532 333333333 333333322 1122 1211112224443 4
Q ss_pred CcHHHHHHHHHHHHHHHHHHHhc
Q 045998 368 LNATQMKKRAVAWKEAAKKALED 390 (408)
Q Consensus 368 ~~~~~~~~~a~~l~~~~~~a~~~ 390 (408)
+.++++.+..++..++.+.+
T Consensus 157 ---~~l~~kl~~~r~~~~~~v~~ 176 (181)
T 4b4k_A 157 ---DDIHDALELRREAIEKDVRE 176 (181)
T ss_dssp ---HHHHHHHHHHHHHHHHHHHH
T ss_pred ---HHHHHHHHHHHHHHHHHHHH
Confidence 78999988888888776543
No 63
>2lpm_A Two-component response regulator; transcription regulator; NMR {Sinorhizobium meliloti}
Probab=54.15 E-value=9.9 Score=29.74 Aligned_cols=38 Identities=11% Similarity=0.021 Sum_probs=26.3
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHH---cCCCeEEE
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAE---HKIPCAVL 88 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~---lgIP~v~~ 88 (408)
++.++.+.+ .+||+||.|..++ -|..+++. .++|.+.+
T Consensus 43 ~eAl~~~~~--~~~DlvllDi~mP~~~G~el~~~lr~~~ipvI~l 85 (123)
T 2lpm_A 43 QEALDIARK--GQFDIAIIDVNLDGEPSYPVADILAERNVPFIFA 85 (123)
T ss_dssp HHHHHHHHH--CCSSEEEECSSSSSCCSHHHHHHHHHTCCSSCCB
T ss_pred HHHHHHHHh--CCCCEEEEecCCCCCCHHHHHHHHHcCCCCEEEE
Confidence 444455544 5899999999885 56777764 47887654
No 64
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=53.30 E-value=15 Score=29.11 Aligned_cols=33 Identities=18% Similarity=0.199 Sum_probs=24.7
Q ss_pred CCccEEEECCCCC--cHHHHHHHc-------CCCeEEEecch
Q 045998 60 KKKSCIITNPFMP--WVPDVAAEH-------KIPCAVLWIQA 92 (408)
Q Consensus 60 ~~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~~ 92 (408)
.+||+||.|..++ -|..+++++ ++|.+.++...
T Consensus 56 ~~~DlillD~~MP~mdG~el~~~ir~~~~~~~ipvI~lTa~~ 97 (134)
T 3to5_A 56 GDFDFVVTDWNMPGMQGIDLLKNIRADEELKHLPVLMITAEA 97 (134)
T ss_dssp HCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTCCEEEEESSC
T ss_pred CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCCCCeEEEEECCC
Confidence 4799999999986 677777654 48887775543
No 65
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=52.43 E-value=25 Score=30.61 Aligned_cols=155 Identities=11% Similarity=0.056 Sum_probs=81.0
Q ss_pred hhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhc-CCCeEEEecccHHHH
Q 045998 212 QWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEET-KDRGLVVKWCSQEKV 290 (408)
Q Consensus 212 ~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~-~~n~~v~~w~pq~~l 290 (408)
-|++-. .+.|++|..|.+. ...+..|.+.|..+.++.... .+.+.+-. .+++.++...-+...
T Consensus 25 ifl~L~-gk~VLVVGgG~va-------~~ka~~Ll~~GA~VtVvap~~--------~~~l~~l~~~~~i~~i~~~~~~~d 88 (223)
T 3dfz_A 25 VMLDLK-GRSVLVVGGGTIA-------TRRIKGFLQEGAAITVVAPTV--------SAEINEWEAKGQLRVKRKKVGEED 88 (223)
T ss_dssp EEECCT-TCCEEEECCSHHH-------HHHHHHHGGGCCCEEEECSSC--------CHHHHHHHHTTSCEEECSCCCGGG
T ss_pred cEEEcC-CCEEEEECCCHHH-------HHHHHHHHHCCCEEEEECCCC--------CHHHHHHHHcCCcEEEECCCCHhH
Confidence 455554 4568888877544 456677888888887764321 11221111 234555432223345
Q ss_pred hcccCcceEEeccCcchHHHHHHcCCceeeccC-CCChhhhHH-----hhhceeeeEEEeecCCCCCcCHHHHHHHHHHH
Q 045998 291 LMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPE-WTDQPTDAK-----LLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEA 364 (408)
Q Consensus 291 L~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~-~~DQ~~na~-----~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~v 364 (408)
|..+++ +|.--|--.+.+.++.-.- ..+|+ ..|.+..+. .+.+ -++-+.+........-+..|++.|++.
T Consensus 89 L~~adL--VIaAT~d~~~N~~I~~~ak-~gi~VNvvD~p~~~~f~~Paiv~r-g~l~iaIST~G~sP~la~~iR~~ie~~ 164 (223)
T 3dfz_A 89 LLNVFF--IVVATNDQAVNKFVKQHIK-NDQLVNMASSFSDGNIQIPAQFSR-GRLSLAISTDGASPLLTKRIKEDLSSN 164 (223)
T ss_dssp SSSCSE--EEECCCCTHHHHHHHHHSC-TTCEEEC-----CCSEECCEEEEE-TTEEEEEECTTSCHHHHHHHHHHHHHH
T ss_pred hCCCCE--EEECCCCHHHHHHHHHHHh-CCCEEEEeCCcccCeEEEeeEEEe-CCEEEEEECCCCCcHHHHHHHHHHHHH
Confidence 777777 8888887666655554222 23332 235555443 2222 344555554222334456677777666
Q ss_pred hcCCcHHHHHHHHHHHHHHHHHH
Q 045998 365 TQGLNATQMKKRAVAWKEAAKKA 387 (408)
Q Consensus 365 l~~~~~~~~~~~a~~l~~~~~~a 387 (408)
+.. +-..+-+.+.++++.+++.
T Consensus 165 lp~-~~~~~~~~~~~~R~~vk~~ 186 (223)
T 3dfz_A 165 YDE-SYTQYTQFLYECRVLIHRL 186 (223)
T ss_dssp SCT-HHHHHHHHHHHHHHHHHHC
T ss_pred ccH-HHHHHHHHHHHHHHHHHHH
Confidence 642 2235667777777777654
No 66
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=48.67 E-value=29 Score=25.99 Aligned_cols=42 Identities=24% Similarity=0.187 Sum_probs=28.1
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-------CCCeEEEecc
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-------KIPCAVLWIQ 91 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 91 (408)
.++.++.+.+ .+||+||.|..++ -+..+.+++ ++|.+.++..
T Consensus 35 ~~~al~~l~~--~~~dlvllD~~~p~~~g~~~~~~l~~~~~~~~~pii~~s~~ 85 (122)
T 3gl9_A 35 GQIALEKLSE--FTPDLIVLXIMMPVMDGFTVLKKLQEKEEWKRIPVIVLTAK 85 (122)
T ss_dssp HHHHHHHHTT--BCCSEEEECSCCSSSCHHHHHHHHHTSTTTTTSCEEEEESC
T ss_pred HHHHHHHHHh--cCCCEEEEeccCCCCcHHHHHHHHHhcccccCCCEEEEecC
Confidence 3445555543 5799999998774 466666643 5788877653
No 67
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=45.64 E-value=41 Score=34.73 Aligned_cols=110 Identities=8% Similarity=0.059 Sum_probs=74.4
Q ss_pred ecccHHHHhcccCcceEEeccCcchHHHHHHcCCceeeccCCCChhhhH-Hh----hhceeeeEEEeecCCCCCcCHHHH
Q 045998 283 KWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPVIAYPEWTDQPTDA-KL----LVDVFKIGVRMRNEEDGTLSIQQV 357 (408)
Q Consensus 283 ~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~DQ~~na-~~----v~~~~g~G~~l~~~~~~~~~~~~l 357 (408)
++.+-.++|..+++ .||=- ...+.|.+..++|+|....-.|++.+- +- ..+ .--|.. .-+.++|
T Consensus 605 ~~~di~~ll~~aD~--lITDy-SSv~fD~~~l~kPiif~~~D~~~Y~~~~rg~y~d~~~-~~pg~~-------~~~~~eL 673 (729)
T 3l7i_A 605 NYNDVSELFLISDC--LITDY-SSVMFDYGILKRPQFFFAYDIDKYDKGLRGFYMNYME-DLPGPI-------YTEPYGL 673 (729)
T ss_dssp TCSCHHHHHHTCSE--EEESS-CTHHHHHGGGCCCEEEECTTTTTTTSSCCSBSSCTTS-SSSSCE-------ESSHHHH
T ss_pred CCcCHHHHHHHhCE--EEeec-hHHHHhHHhhCCCEEEecCCHHHHhhccCCcccChhH-hCCCCe-------ECCHHHH
Confidence 56677789999999 99985 346789999999999987766665431 10 011 112222 3367899
Q ss_pred HHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHH
Q 045998 358 QRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEIT 406 (408)
Q Consensus 358 ~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~ 406 (408)
.++|++.... ...|+++.+++.+.+-.- .+|.++.+-++.+++...
T Consensus 674 ~~~i~~~~~~--~~~~~~~~~~~~~~~~~~-~dg~as~ri~~~i~~~~~ 719 (729)
T 3l7i_A 674 AKELKNLDKV--QQQYQEKIDAFYDRFCSV-DNGKASQYIGDLIHKDIK 719 (729)
T ss_dssp HHHHTTHHHH--HHHTHHHHHHHHHHHSTT-CCSCHHHHHHHHHHHHHH
T ss_pred HHHHhhhhcc--chhHHHHHHHHHHHhCCc-cCChHHHHHHHHHHhcCc
Confidence 9998877653 156777777777766442 567888888887776654
No 68
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=42.31 E-value=61 Score=30.06 Aligned_cols=94 Identities=16% Similarity=0.229 Sum_probs=49.3
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccch-hhh-hhc-----CCCeEEEec--cc-----
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRA-GFL-EET-----KDRGLVVKW--CS----- 286 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~-~~~-~~~-----~~n~~v~~w--~p----- 286 (408)
.|++.+-||-.... -..++++.|.+.|++|+|+......+. ..+|+ ++. ..+ +.+.. ..+ .|
T Consensus 4 ~i~i~~GGTgGHi~--palala~~L~~~g~~V~~vg~~~g~e~-~~v~~~g~~~~~i~~~~~~~~~~-~~~~~~~~~~~~ 79 (365)
T 3s2u_A 4 NVLIMAGGTGGHVF--PALACAREFQARGYAVHWLGTPRGIEN-DLVPKAGLPLHLIQVSGLRGKGL-KSLVKAPLELLK 79 (365)
T ss_dssp EEEEECCSSHHHHH--HHHHHHHHHHHTTCEEEEEECSSSTHH-HHTGGGTCCEEECC---------------CHHHHHH
T ss_pred cEEEEcCCCHHHHH--HHHHHHHHHHhCCCEEEEEECCchHhh-chhhhcCCcEEEEECCCcCCCCH-HHHHHHHHHHHH
Confidence 46666666644221 134688899999999999865432210 01111 000 000 01100 011 01
Q ss_pred ---H-HHHhc--ccCcceEEeccCcchH---HHHHHcCCceee
Q 045998 287 ---Q-EKVLM--HAAVSCFLTHCGWNST---LETVAAGVPVIA 320 (408)
Q Consensus 287 ---q-~~lL~--h~~v~~fitHgG~~s~---~eal~~GvP~i~ 320 (408)
| ..+|. .|++ +|++||.-|. +.|...|+|+++
T Consensus 80 ~~~~~~~~l~~~~PDv--Vi~~g~~~s~p~~laA~~~~iP~vi 120 (365)
T 3s2u_A 80 SLFQALRVIRQLRPVC--VLGLGGYVTGPGGLAARLNGVPLVI 120 (365)
T ss_dssp HHHHHHHHHHHHCCSE--EEECSSSTHHHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHHhcCCCE--EEEcCCcchHHHHHHHHHcCCCEEE
Confidence 1 12333 5677 9999997764 567788999996
No 69
>4e5s_A MCCFLIKE protein (BA_5613); structural genomics, center for structural genomi infectious diseases, csgid, serine peptidase S66; 1.95A {Bacillus anthracis}
Probab=41.76 E-value=26 Score=32.58 Aligned_cols=72 Identities=8% Similarity=0.114 Sum_probs=46.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHH
Q 045998 234 SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVA 313 (408)
Q Consensus 234 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~ 313 (408)
+.+.++.+.+++.+...+.||.++.+... .++.++++...+-+||++ |+=+.-...++-+++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~----------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al~ 124 (331)
T 4e5s_A 63 ISSRVQDLHEAFRDPNVKAILTTLGGYNS----------------NGLLKYLDYDLIRENPKF--FCGYSDITALNNAIY 124 (331)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG----------------GGGGGGCCHHHHHTSCCE--EEECGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH----------------HHHHhhcChhHHHhCCeE--EEEecchHHHHHHHH
Confidence 45778889999999999999988765322 112233344445556666 776666666666665
Q ss_pred --cCCceeeccC
Q 045998 314 --AGVPVIAYPE 323 (408)
Q Consensus 314 --~GvP~i~~P~ 323 (408)
.|+..+--|.
T Consensus 125 ~~~G~~t~hGp~ 136 (331)
T 4e5s_A 125 TKTGLVTYSGPH 136 (331)
T ss_dssp HHHCBCEEECCC
T ss_pred HhhCCcEEEccc
Confidence 4666666555
No 70
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=40.19 E-value=77 Score=27.33 Aligned_cols=44 Identities=14% Similarity=-0.023 Sum_probs=29.0
Q ss_pred eEEEecccHH-HH-hcccCcceEEeccCcchHHHHH---------HcCCceeeccC
Q 045998 279 GLVVKWCSQE-KV-LMHAAVSCFLTHCGWNSTLETV---------AAGVPVIAYPE 323 (408)
Q Consensus 279 ~~v~~w~pq~-~l-L~h~~v~~fitHgG~~s~~eal---------~~GvP~i~~P~ 323 (408)
..++...+.+ .+ ..+++ ..++--||.||+-|.. .+++|++.+-.
T Consensus 89 ~~~~~~~~~Rk~~~~~~sd-a~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 143 (216)
T 1ydh_A 89 VRVVADMHERKAAMAQEAE-AFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNV 143 (216)
T ss_dssp EEEESSHHHHHHHHHHHCS-EEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECG
T ss_pred ccccCCHHHHHHHHHHhCC-EEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecC
Confidence 4455555544 33 34444 4567789999987765 47999998863
No 71
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=37.79 E-value=48 Score=25.28 Aligned_cols=41 Identities=12% Similarity=0.202 Sum_probs=26.5
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-------CCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-------KIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 91 (408)
++.++.+.+ .+||+||.|..++ -+..+++.+ ++|.++++..
T Consensus 38 ~~al~~~~~--~~~dlvl~D~~lp~~~g~~~~~~lr~~~~~~~~pii~~t~~ 87 (136)
T 3t6k_A 38 EEALQQIYK--NLPDALICDVLLPGIDGYTLCKRVRQHPLTKTLPILMLTAQ 87 (136)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSGGGTTCCEEEEECT
T ss_pred HHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHcCCCcCCccEEEEecC
Confidence 444555544 4799999998875 456665543 5787776543
No 72
>4h1h_A LMO1638 protein; MCCF-like, csgid, MCCF homolog, structural genomics, niaid, institute of allergy and infectious diseases; 2.46A {Listeria monocytogenes}
Probab=37.50 E-value=33 Score=31.74 Aligned_cols=72 Identities=4% Similarity=0.061 Sum_probs=44.1
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHH
Q 045998 234 SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVA 313 (408)
Q Consensus 234 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~ 313 (408)
+.+..+.+.++|.+...+.||..+.+... .++.++++...+-+||+. |+=+.-...++-+++
T Consensus 63 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~----------------~rlL~~LD~~~i~~~PK~--~~GySDiT~L~~al~ 124 (327)
T 4h1h_A 63 IRSRVADIHEAFNDSSVKAILTVIGGFNS----------------NQLLPYLDYDLISENPKI--LCGFSDITALATAIY 124 (327)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG----------------GGGGGGCCHHHHHHSCCE--EEECTTHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEcCCchhH----------------HHHhhhcchhhhccCCeE--EEecccccHHHHHHH
Confidence 45778889999999999999987665322 112234444455555555 666666555555554
Q ss_pred --cCCceeeccC
Q 045998 314 --AGVPVIAYPE 323 (408)
Q Consensus 314 --~GvP~i~~P~ 323 (408)
.|+..+.-|+
T Consensus 125 ~~~g~~t~hGp~ 136 (327)
T 4h1h_A 125 TQTELITYSGAH 136 (327)
T ss_dssp HHHCBCEEECCC
T ss_pred HhcCeEEEeCcc
Confidence 3555544444
No 73
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=35.80 E-value=39 Score=26.11 Aligned_cols=41 Identities=17% Similarity=0.302 Sum_probs=26.6
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc---------CCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH---------KIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l---------gIP~v~~~~~ 91 (408)
++.++.+.. .+||+||.|..++ -+..+++.+ .+|.++++..
T Consensus 48 ~~al~~~~~--~~~dlvl~D~~mp~~~g~~~~~~lr~~~~~~~~~~pii~~s~~ 99 (143)
T 3m6m_D 48 EQVLDAMAE--EDYDAVIVDLHMPGMNGLDMLKQLRVMQASGMRYTPVVVLSAD 99 (143)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHHHTTCCCCCEEEEESC
T ss_pred HHHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhchhccCCCCeEEEEeCC
Confidence 444555544 5799999998774 466666554 2677776543
No 74
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=34.45 E-value=2.2e+02 Score=24.39 Aligned_cols=44 Identities=14% Similarity=0.032 Sum_probs=29.4
Q ss_pred EEEecccHH-HHhcccCcceEEeccCcchHHHHHH---------cCCceeeccC
Q 045998 280 LVVKWCSQE-KVLMHAAVSCFLTHCGWNSTLETVA---------AGVPVIAYPE 323 (408)
Q Consensus 280 ~v~~w~pq~-~lL~h~~v~~fitHgG~~s~~eal~---------~GvP~i~~P~ 323 (408)
.+....+++ .++..-+-+.++--||.||+-|... +++|++.+-.
T Consensus 94 ~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~ 147 (215)
T 2a33_A 94 RAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 147 (215)
T ss_dssp EEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECG
T ss_pred eecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecC
Confidence 445556655 4444444456778899999877752 4899998764
No 75
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=32.43 E-value=2.1e+02 Score=23.84 Aligned_cols=104 Identities=14% Similarity=0.122 Sum_probs=58.5
Q ss_pred hhhhhhhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEeccc
Q 045998 207 CIEIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCS 286 (408)
Q Consensus 207 ~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~p 286 (408)
-.+|-++|.++ ++.+||-|.. .....+..++..+.+-+++=++...-.. ..++. ..-.+..+++..+
T Consensus 22 A~~lg~~La~~---g~~lV~GGg~----~GiM~aa~~gA~~~gG~~iGv~p~~l~~--~e~~~----~~~~~~~~~~~~~ 88 (191)
T 1t35_A 22 AAELGVYMAEQ---GIGLVYGGSR----VGLMGTIADAIMENGGTAIGVMPSGLFS--GEVVH----QNLTELIEVNGMH 88 (191)
T ss_dssp HHHHHHHHHHT---TCEEEECCCC----SHHHHHHHHHHHTTTCCEEEEEETTCCH--HHHTT----CCCSEEEEESHHH
T ss_pred HHHHHHHHHHC---CCEEEECCCc----ccHHHHHHHHHHHcCCeEEEEeCchhcc--ccccc----CCCCccccCCCHH
Confidence 45566777764 3566765542 1344666667666676766655432110 01110 0013344556666
Q ss_pred HH-HHhcccCcceEEeccCcchHHHH---H------HcCCceeeccC
Q 045998 287 QE-KVLMHAAVSCFLTHCGWNSTLET---V------AAGVPVIAYPE 323 (408)
Q Consensus 287 q~-~lL~h~~v~~fitHgG~~s~~ea---l------~~GvP~i~~P~ 323 (408)
.+ .++..-+-..++--||.||+-|. + .+++|++.+-.
T Consensus 89 ~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~ 135 (191)
T 1t35_A 89 ERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNV 135 (191)
T ss_dssp HHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECG
T ss_pred HHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecC
Confidence 55 44444444567788999987654 5 37899999854
No 76
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=32.35 E-value=60 Score=23.95 Aligned_cols=42 Identities=14% Similarity=0.193 Sum_probs=26.8
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHH----cCCCeEEEecc
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAE----HKIPCAVLWIQ 91 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~----lgIP~v~~~~~ 91 (408)
.++.++.+.+ .+||+||.|..++ -+..+.+. .++|.+.++..
T Consensus 35 ~~~al~~~~~--~~~dlii~D~~~p~~~g~~~~~~lr~~~~~~ii~~t~~ 82 (120)
T 3f6p_A 35 GNEAVEMVEE--LQPDLILLDIMLPNKDGVEVCREVRKKYDMPIIMLTAK 82 (120)
T ss_dssp HHHHHHHHHT--TCCSEEEEETTSTTTHHHHHHHHHHTTCCSCEEEEEES
T ss_pred HHHHHHHHhh--CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCEEEEECC
Confidence 3445555544 5799999998775 34555543 46887776543
No 77
>3sr3_A Microcin immunity protein MCCF; csgid, structural genomics, MCCF protein, center for structu genomics of infectious diseases, immune system; 1.50A {Bacillus anthracis} PDB: 3gjz_A 3t5m_A* 3u1b_A* 3tyx_A*
Probab=31.92 E-value=48 Score=30.78 Aligned_cols=72 Identities=11% Similarity=0.159 Sum_probs=49.9
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHH
Q 045998 234 SQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVA 313 (408)
Q Consensus 234 ~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~ 313 (408)
+.+.++.+.+++.+...+.||.++.+... .++.++++...+-+||++ |+=+.-...++-+++
T Consensus 64 d~~Ra~dL~~a~~Dp~i~aI~~~rGG~g~----------------~rlL~~lD~~~i~~~PK~--~~GySDiTaL~~al~ 125 (336)
T 3sr3_A 64 IQERAKELNALIRNPNVSCIMSTIGGMNS----------------NSLLPYIDYDAFQNNPKI--MIGYSDATALLLGIY 125 (336)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEESCCCSCG----------------GGGGGGSCHHHHHHSCCE--EEECGGGHHHHHHHH
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccccH----------------HHHhhhcChhHHhhCCeE--EEEechHHHHHHHHH
Confidence 45778889999999999999988765322 112233444455567776 887777777777776
Q ss_pred --cCCceeeccC
Q 045998 314 --AGVPVIAYPE 323 (408)
Q Consensus 314 --~GvP~i~~P~ 323 (408)
.|+..+--|.
T Consensus 126 ~~~G~~t~hGp~ 137 (336)
T 3sr3_A 126 AKTGIPTFYGPA 137 (336)
T ss_dssp HHHCCCEEECCC
T ss_pred HhcCceEEECCh
Confidence 4777777776
No 78
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=31.11 E-value=2.8e+02 Score=24.63 Aligned_cols=157 Identities=11% Similarity=-0.040 Sum_probs=84.2
Q ss_pred hhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhh------------------
Q 045998 213 WLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEE------------------ 274 (408)
Q Consensus 213 ~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~------------------ 274 (408)
|++-. .+.|+.|..|.+. ...+..|.+.|.++.++-..... .+.+.+.+.
T Consensus 8 ~~~l~-~k~VLVVGgG~va-------~rka~~Ll~~Ga~VtViap~~~~----~l~~~~~~l~~~~~~~~~~~~~~~~~~ 75 (274)
T 1kyq_A 8 AHQLK-DKRILLIGGGEVG-------LTRLYKLMPTGCKLTLVSPDLHK----SIIPKFGKFIQNKDQPDYREDAKRFIN 75 (274)
T ss_dssp EECCT-TCEEEEEEESHHH-------HHHHHHHGGGTCEEEEEEEEECT----THHHHHCGGGC-----------CEEEC
T ss_pred EEEcC-CCEEEEECCcHHH-------HHHHHHHHhCCCEEEEEcCCCCc----chhHHHHHHHhccccccccchhhcccc
Confidence 34433 4568888887755 45677788889988776543210 110111111
Q ss_pred -----cCCCe-EEEecccHHHHhc------ccCcceEEeccCcchHHHHHH-----c---CCceeeccCCCChhhhHH--
Q 045998 275 -----TKDRG-LVVKWCSQEKVLM------HAAVSCFLTHCGWNSTLETVA-----A---GVPVIAYPEWTDQPTDAK-- 332 (408)
Q Consensus 275 -----~~~n~-~v~~w~pq~~lL~------h~~v~~fitHgG~~s~~eal~-----~---GvP~i~~P~~~DQ~~na~-- 332 (408)
..+++ .++.---+...|. .+++ +|+--|-..+.+.++ . |+|+-++ |.+.++.
T Consensus 76 ~~~~~~~g~i~~~i~~~~~~~dL~~l~~~~~adl--Viaat~d~~~n~~I~~~Ar~~f~~~i~VNvv----d~pel~~f~ 149 (274)
T 1kyq_A 76 PNWDPTKNEIYEYIRSDFKDEYLDLENENDAWYI--IMTCIPDHPESARIYHLCKERFGKQQLVNVA----DKPDLCDFY 149 (274)
T ss_dssp TTCCTTSCCCSEEECSSCCGGGGCCSSTTCCEEE--EEECCSCHHHHHHHHHHHHHHHCTTSEEEET----TCGGGBSEE
T ss_pred cccccccCCeeEEEcCCCCHHHHhhcccCCCeEE--EEEcCCChHHHHHHHHHHHHhcCCCcEEEEC----CCcccCeeE
Confidence 11333 3331111223344 5555 777777654444433 2 5555333 5555544
Q ss_pred ---hhhceee-eEEEeecCCCCCcCHHHHHHHHHHHh---cCCcHHHHHHHHHHHHHHHHHHH
Q 045998 333 ---LLVDVFK-IGVRMRNEEDGTLSIQQVQRCIDEAT---QGLNATQMKKRAVAWKEAAKKAL 388 (408)
Q Consensus 333 ---~v~~~~g-~G~~l~~~~~~~~~~~~l~~~i~~vl---~~~~~~~~~~~a~~l~~~~~~a~ 388 (408)
.+.+ -+ +-+.+........-+..|++.|+..+ .+++-..+-+.+.++++.+++..
T Consensus 150 ~Pa~~~~-g~~l~IaIST~Gksp~lA~~ir~~ie~~l~~~p~~~~~~~~~~l~~~R~~ik~~~ 211 (274)
T 1kyq_A 150 FGANLEI-GDRLQILISTNGLSPRFGALVRDEIRNLFTQMGDLALEDAVVKLGELRRGIRLLA 211 (274)
T ss_dssp CCEEEEE-TTTEEEEEEESSSCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHS
T ss_pred eeeEEEe-CCCEEEEEECCCCCcHHHHHHHHHHHHHHhcCCchhHHHHHHHHHHHHHHHHhhC
Confidence 3333 23 34444442224455578888888888 53333467888888888888754
No 79
>1zl0_A Hypothetical protein PA5198; structural genomics, PSI, PROT structure initiative, midwest center for structural genomic unknown function; HET: TLA PEG; 1.10A {Pseudomonas aeruginosa} SCOP: c.8.10.1 c.23.16.7 PDB: 1zrs_A 2aum_A 2aun_A
Probab=30.49 E-value=52 Score=30.20 Aligned_cols=74 Identities=12% Similarity=0.192 Sum_probs=52.7
Q ss_pred CCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhc-ccCcceEEeccCcchHHHH
Q 045998 233 LSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLM-HAAVSCFLTHCGWNSTLET 311 (408)
Q Consensus 233 ~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~-h~~v~~fitHgG~~s~~ea 311 (408)
.+.+.++.+.+++.+...+.||.++..... .++.++++...+-+ +|++ ||=+.-...++-+
T Consensus 64 td~~Ra~dL~~a~~Dp~i~aI~~~rGGyga----------------~rlLp~LD~~~i~~a~PK~--~iGySDiTaL~~a 125 (311)
T 1zl0_A 64 TVEQRLEDLHNAFDMPDITAVWCLRGGYGC----------------GQLLPGLDWGRLQAASPRP--LIGFSDISVLLSA 125 (311)
T ss_dssp CHHHHHHHHHHHHHSTTEEEEEESCCSSCG----------------GGGTTTCCHHHHHHSCCCC--EEECGGGHHHHHH
T ss_pred CHHHHHHHHHHHHhCCCCCEEEEccCCcCH----------------HHHhhccchhhhhccCCCE--EEEEchhHHHHHH
Confidence 356778889999999999999988765322 11223444455555 7877 8888888888888
Q ss_pred HH-cCCceeeccCC
Q 045998 312 VA-AGVPVIAYPEW 324 (408)
Q Consensus 312 l~-~GvP~i~~P~~ 324 (408)
++ .|++.+--|..
T Consensus 126 l~~~G~~t~hGp~~ 139 (311)
T 1zl0_A 126 FHRHGLPAIHGPVA 139 (311)
T ss_dssp HHHTTCCEEECCCG
T ss_pred HHHcCCcEEECHhh
Confidence 86 48888777754
No 80
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=30.35 E-value=2.1e+02 Score=25.80 Aligned_cols=24 Identities=8% Similarity=0.156 Sum_probs=16.9
Q ss_pred hhhhhhhhccCCCCceEEEecCCcc
Q 045998 207 CIEIHQWLNKKPPSSVIYISFGSLL 231 (408)
Q Consensus 207 ~~~l~~~l~~~~~~~vvyvs~GS~~ 231 (408)
|++..+|.+.-.- ..+=+++||..
T Consensus 157 Peea~~Fv~~Tgv-D~LAvaiGt~H 180 (286)
T 1gvf_A 157 PQEAKRFVELTGV-DSLAVAIGTAH 180 (286)
T ss_dssp HHHHHHHHHHHCC-SEEEECSSCCS
T ss_pred HHHHHHHHHHHCC-CEEEeecCccc
Confidence 7778888864322 26888888876
No 81
>3o1l_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 2.20A {Pseudomonas syringae PV}
Probab=29.87 E-value=2.9e+02 Score=24.98 Aligned_cols=107 Identities=13% Similarity=0.156 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHc
Q 045998 235 QNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAA 314 (408)
Q Consensus 235 ~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~ 314 (408)
.+.-.++++.|++.+..++...+... -||+.+.+..+.++.-+ |+++ .=...|.+.+..|+.+
T Consensus 167 ~~~~~~~~~~l~~~~~DliVlagym~-----IL~~~~l~~~~~~~INi----------HpSl--LP~frG~~p~~~Ai~~ 229 (302)
T 3o1l_A 167 EPAFAEVSRLVGHHQADVVVLARYMQ-----ILPPQLCREYAHQVINI----------HHSF--LPSFVGAKPYHQASLR 229 (302)
T ss_dssp HHHHHHHHHHHHHTTCSEEEESSCCS-----CCCTTHHHHTTTCEEEE----------ESSC--TTSSCSSCHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCEEEHhHhhh-----hcCHHHHhhhhCCeEEe----------Cccc--ccCCCCccHHHHHHHc
Confidence 34445677888888888888777643 56777776655444333 2332 2334689999999999
Q ss_pred CCceeeccCC--CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHh
Q 045998 315 GVPVIAYPEW--TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 315 GvP~i~~P~~--~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl 365 (408)
|+...++-.+ .+..+-..-+.. --+.+. ..-|.++|.+.+.++-
T Consensus 230 G~k~tG~TvH~v~~~lD~GpII~Q---~~v~I~----~~dt~~~L~~r~~~~e 275 (302)
T 3o1l_A 230 GVKLIGATCHYVTEELDAGPIIEQ---DVVRVS----HRDSIENMVRFGRDVE 275 (302)
T ss_dssp TCSEEEEEEEECCSSTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHHH
T ss_pred CCCeEEEEEEEECCCCcCCCeEEE---EEEecC----CCCCHHHHHHHHHHHH
Confidence 9999887653 233333333332 222332 4568888888776653
No 82
>3kxe_C Antitoxin protein PARD-1; complex, TA system, protein binding; 2.60A {Caulobacter crescentus NA1000}
Probab=29.33 E-value=79 Score=23.01 Aligned_cols=50 Identities=18% Similarity=0.247 Sum_probs=33.2
Q ss_pred CHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHhcCCChHHHHHHHHHHHHhC
Q 045998 353 SIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKKALEDGGSSDANINRFINEITRK 408 (408)
Q Consensus 353 ~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~a~~~gg~s~~~~~~~v~~l~~~ 408 (408)
.++-|+++|+.+... ......|+..+......|-+...+.+.|+..++.|
T Consensus 30 ~SEviR~~lR~l~~r------e~~l~~Lr~~l~~G~~Sg~~~~~d~d~v~a~~~~~ 79 (88)
T 3kxe_C 30 ASEVIRAGLRLLEEN------EAKLAALRAALIEGEESGFIEDFDFDAFIEERSRA 79 (88)
T ss_dssp HHHHHHHHHHHHHHH------HHHHHHHHHHHHHHHHTCEESSCCHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHH------hHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHH
Confidence 346677777655432 23456788888887766665446788888888654
No 83
>1pjq_A CYSG, siroheme synthase; rossman fold, nucleotide binding motif, SAM, NAD, phosphoserine, transferase/oxidoreductase/lyase complex; HET: SEP PGE SAH; 2.21A {Salmonella typhimurium} SCOP: c.2.1.11 c.90.1.1 e.37.1.1 PDB: 1pjs_A* 1pjt_A*
Probab=28.39 E-value=2.4e+02 Score=27.09 Aligned_cols=149 Identities=9% Similarity=0.021 Sum_probs=77.9
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhc-CCCeEEEecccHHHHhcccCcc
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEET-KDRGLVVKWCSQEKVLMHAAVS 297 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~-~~n~~v~~w~pq~~lL~h~~v~ 297 (408)
.+.|+.|..|.+. ...+..|.+.|.++.++-... .+.+.+-. ..++.+..-.-+..-|..+++
T Consensus 12 ~~~vlVvGgG~va-------~~k~~~L~~~ga~V~vi~~~~--------~~~~~~l~~~~~i~~~~~~~~~~~l~~~~l- 75 (457)
T 1pjq_A 12 DRDCLIVGGGDVA-------ERKARLLLEAGARLTVNALTF--------IPQFTVWANEGMLTLVEGPFDETLLDSCWL- 75 (457)
T ss_dssp TCEEEEECCSHHH-------HHHHHHHHHTTBEEEEEESSC--------CHHHHHHHTTTSCEEEESSCCGGGGTTCSE-
T ss_pred CCEEEEECCCHHH-------HHHHHHHHhCcCEEEEEcCCC--------CHHHHHHHhcCCEEEEECCCCccccCCccE-
Confidence 4568888877655 455677778888877654321 12222111 134544421112234566676
Q ss_pred eEEeccCcch-----HHHHHHcCCce--eeccCCCChhhhHHhhhc-eeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCc
Q 045998 298 CFLTHCGWNS-----TLETVAAGVPV--IAYPEWTDQPTDAKLLVD-VFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLN 369 (408)
Q Consensus 298 ~fitHgG~~s-----~~eal~~GvP~--i~~P~~~DQ~~na~~v~~-~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~ 369 (408)
+|.--|--. ..+|-..|+|+ +--|-..+...-+- +.+ ..-+|+. .......-+..|++.|+..+...
T Consensus 76 -Vi~at~~~~~n~~i~~~a~~~~i~vn~~d~~e~~~~~~pa~-~~~~~l~iaIs--T~Gksp~la~~ir~~ie~~l~~~- 150 (457)
T 1pjq_A 76 -AIAATDDDTVNQRVSDAAESRRIFCNVVDAPKAASFIMPSI-IDRSPLMVAVS--SGGTSPVLARLLREKLESLLPQH- 150 (457)
T ss_dssp -EEECCSCHHHHHHHHHHHHHTTCEEEETTCTTSSSEECCEE-EEETTEEEEEE--CTTSCHHHHHHHHHHHHHHSCTT-
T ss_pred -EEEcCCCHHHHHHHHHHHHHcCCEEEECCCcccCceEeeeE-EEeCCeEEEEE--CCCCChHHHHHHHHHHHHhcchh-
Confidence 777777554 34455678886 33333333222110 111 1234444 31112333577788888777532
Q ss_pred HHHHHHHHHHHHHHHHHHH
Q 045998 370 ATQMKKRAVAWKEAAKKAL 388 (408)
Q Consensus 370 ~~~~~~~a~~l~~~~~~a~ 388 (408)
-..+-+.+.++++.+++..
T Consensus 151 ~~~~~~~~~~~R~~~~~~~ 169 (457)
T 1pjq_A 151 LGQVARYAGQLRARVKKQF 169 (457)
T ss_dssp HHHHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHhhC
Confidence 2356677777777776643
No 84
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=27.98 E-value=84 Score=26.46 Aligned_cols=44 Identities=9% Similarity=0.172 Sum_probs=33.9
Q ss_pred HHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEecchhH
Q 045998 46 KNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWIQACA 94 (408)
Q Consensus 46 ~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~~~~~ 94 (408)
..+++.++++++ .++|+||-| ..+..+|+++|+|.+.+.+...+
T Consensus 129 ~e~~~~i~~l~~--~G~~vvVG~---~~~~~~A~~~Gl~~vli~sg~eS 172 (196)
T 2q5c_A 129 DEITTLISKVKT--ENIKIVVSG---KTVTDEAIKQGLYGETINSGEES 172 (196)
T ss_dssp GGHHHHHHHHHH--TTCCEEEEC---HHHHHHHHHTTCEEEECCCCHHH
T ss_pred HHHHHHHHHHHH--CCCeEEECC---HHHHHHHHHcCCcEEEEecCHHH
Confidence 456778888877 579999976 34588999999999988764433
No 85
>1dbw_A Transcriptional regulatory protein FIXJ; doubly wound five-stranded beta/alpha fold, nitrogen fixatio regulation; HET: 15P; 1.60A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1dck_A* 1dcm_A 1d5w_A*
Probab=27.76 E-value=1e+02 Score=22.76 Aligned_cols=41 Identities=15% Similarity=0.219 Sum_probs=26.4
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 91 (408)
.+.++.+.. .+||+||.|..++ .+..+.+.+ ++|.+.++..
T Consensus 37 ~~~~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (126)
T 1dbw_A 37 EAFLAFAPD--VRNGVLVTDLRMPDMSGVELLRNLGDLKINIPSIVITGH 84 (126)
T ss_dssp HHHHHHGGG--CCSEEEEEECCSTTSCHHHHHHHHHHTTCCCCEEEEECT
T ss_pred HHHHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHhcCCCCCEEEEECC
Confidence 445555544 4789999998764 455555443 5787777543
No 86
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=27.69 E-value=75 Score=28.89 Aligned_cols=32 Identities=16% Similarity=0.158 Sum_probs=24.1
Q ss_pred HhcccCcceEEeccCcchHHHHHHc----CCceeeccC
Q 045998 290 VLMHAAVSCFLTHCGWNSTLETVAA----GVPVIAYPE 323 (408)
Q Consensus 290 lL~h~~v~~fitHgG~~s~~eal~~----GvP~i~~P~ 323 (408)
....+++ +|+-||=||+++++.. ++|+++++.
T Consensus 72 ~~~~~d~--vi~~GGDGT~l~a~~~~~~~~~pvlgi~~ 107 (307)
T 1u0t_A 72 AADGCEL--VLVLGGDGTFLRAAELARNASIPVLGVNL 107 (307)
T ss_dssp ----CCC--EEEEECHHHHHHHHHHHHHHTCCEEEEEC
T ss_pred cccCCCE--EEEEeCCHHHHHHHHHhccCCCCEEEEeC
Confidence 4456677 9999999999999754 899999874
No 87
>2w36_A Endonuclease V; hypoxanthine, endonuclease, endonucleasev, hydrolase, inosine, DNA damage, DNA repair; HET: BRU; 2.10A {Thermotoga maritima} PDB: 2w35_A 3hd0_A
Probab=27.61 E-value=45 Score=29.06 Aligned_cols=39 Identities=10% Similarity=-0.026 Sum_probs=24.9
Q ss_pred HHHHHHHHhhcCCCCccEEEECCCCCc---HHH----HHHHcCCCeEEE
Q 045998 47 NLSSIINNLSNNDKKKSCIITNPFMPW---VPD----VAAEHKIPCAVL 88 (408)
Q Consensus 47 ~l~~ll~~l~~~~~~~D~vI~D~~~~~---~~~----vA~~lgIP~v~~ 88 (408)
.+-+++++|. .+||+|++|..-.. ... +.-.+++|+|.+
T Consensus 92 ~~l~al~~L~---~~PdlllvDG~Gi~HpR~~GlA~HlGv~l~~PtIGV 137 (225)
T 2w36_A 92 LFLKAWEKLR---TKPDVVVFDGQGLAHPRKLGIASHMGLFIEIPTIGV 137 (225)
T ss_dssp HHHHHHTTCC---SCCSEEEEESCSSSSTTSCCHHHHHHHHHTSCEEEE
T ss_pred HHHHHHHhcC---CCCCEEEEeCeEEEcCCCCCchhhhhhhhCCCEEEE
Confidence 3344445543 47999999986543 333 444558999887
No 88
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=27.46 E-value=90 Score=24.23 Aligned_cols=41 Identities=24% Similarity=0.218 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHH-------cCCCeEEEec
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAE-------HKIPCAVLWI 90 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~-------lgIP~v~~~~ 90 (408)
.++.++.+.+ .+||+||.|..++ -+..+++. -++|.++++.
T Consensus 40 ~~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~ 89 (154)
T 3gt7_A 40 GREAVRFLSL--TRPDLIISDVLMPEMDGYALCRWLKGQPDLRTIPVILLTI 89 (154)
T ss_dssp HHHHHHHHTT--CCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEEC
T ss_pred HHHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCCCcCCCCEEEEEC
Confidence 4555555544 5799999998764 45555543 2577777654
No 89
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=27.32 E-value=2.8e+02 Score=23.31 Aligned_cols=98 Identities=17% Similarity=0.202 Sum_probs=55.0
Q ss_pred hhhhhhhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEE--ec
Q 045998 207 CIEIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVV--KW 284 (408)
Q Consensus 207 ~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~--~w 284 (408)
-.+|-++|.++ ++.+||-|. .....+..++..+.+-+++=++.... . +..+ ....+. ..
T Consensus 47 A~~lg~~LA~~---G~~vVsGg~-----~GiM~aa~~gAl~~GG~~iGVlP~e~-~-----~~~~-----~~~~~~~~~~ 107 (195)
T 1rcu_A 47 CLELGRTLAKK---GYLVFNGGR-----DGVMELVSQGVREAGGTVVGILPDEE-A-----GNPY-----LSVAVKTGLD 107 (195)
T ss_dssp HHHHHHHHHHT---TCEEEECCS-----SHHHHHHHHHHHHTTCCEEEEESTTC-C-----CCTT-----CSEEEECCCC
T ss_pred HHHHHHHHHHC---CCEEEeCCH-----HHHHHHHHHHHHHcCCcEEEEeCCcc-c-----CCCC-----cceeeecCCC
Confidence 45556777764 356666332 23445566666566666666553311 1 0111 233343 23
Q ss_pred cc-HHHHhcccCcceEEeccCcchHHH---HHHcCCceeeccC
Q 045998 285 CS-QEKVLMHAAVSCFLTHCGWNSTLE---TVAAGVPVIAYPE 323 (408)
Q Consensus 285 ~p-q~~lL~h~~v~~fitHgG~~s~~e---al~~GvP~i~~P~ 323 (408)
.+ ...++..-+-..++--||.||+.| ++.+++|+++++.
T Consensus 108 f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~~~kPV~lln~ 150 (195)
T 1rcu_A 108 FQMRSFVLLRNADVVVSIGGEIGTAIEILGAYALGKPVILLRG 150 (195)
T ss_dssp HHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHHTTCCEEEETT
T ss_pred HHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHhcCCCEEEECC
Confidence 45 344544444456777899888755 5779999999974
No 90
>3c3m_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.70A {Methanoculleus marisnigri JR1}
Probab=26.35 E-value=92 Score=23.53 Aligned_cols=40 Identities=13% Similarity=0.112 Sum_probs=24.8
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-------CCCeEEEec
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-------KIPCAVLWI 90 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~ 90 (408)
.+.++.+.. .+||+||.|..++ -+..+.+.+ .+|.+.++.
T Consensus 37 ~~al~~l~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~~~ii~ls~ 85 (138)
T 3c3m_A 37 EECLEALNA--TPPDLVLLDIMMEPMDGWETLERIKTDPATRDIPVLMLTA 85 (138)
T ss_dssp HHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHSTTTTTSCEEEEES
T ss_pred HHHHHHHhc--cCCCEEEEeCCCCCCCHHHHHHHHHcCcccCCCCEEEEEC
Confidence 344444443 4689999998774 456665543 467776643
No 91
>3nrb_A Formyltetrahydrofolate deformylase; N-terminal ACT domain, structural genomics, joint center for structural genomics, JCSG; HET: MSE FLC; 2.05A {Pseudomonas putida}
Probab=26.30 E-value=2.3e+02 Score=25.46 Aligned_cols=115 Identities=10% Similarity=0.116 Sum_probs=70.1
Q ss_pred HHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCc
Q 045998 238 IDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVP 317 (408)
Q Consensus 238 ~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP 317 (408)
-.++++.|++.+..++...+... -||+.+.+..+.++.-+ |+++ .=...|.+.+..|+.+|+.
T Consensus 154 ~~~~~~~l~~~~~Dlivlagym~-----il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~~G~k 216 (287)
T 3nrb_A 154 ESQIKNIVTQSQADLIVLARYMQ-----ILSDDLSAFLSGRCINI----------HHSF--LPGFKGAKPYHQAHTRGVK 216 (287)
T ss_dssp HHHHHHHHHHHTCSEEEESSCCS-----CCCHHHHHHHTTSEEEE----------ESSC--TTTTCSSCHHHHHHHHTCS
T ss_pred HHHHHHHHHHhCCCEEEhhhhhh-----hcCHHHHhhccCCeEEE----------Cccc--ccCCCCchHHHHHHHcCCC
Confidence 34578888888888888877653 67788877665554433 2332 2234689999999999999
Q ss_pred eeeccCCC--ChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 045998 318 VIAYPEWT--DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAW 380 (408)
Q Consensus 318 ~i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 380 (408)
..++-.+. +..+-..-+.. --+.+. ..-|.++|.+.+.++-. .-|.+..+.+
T Consensus 217 ~tG~Tvh~v~~~lD~GpIi~Q---~~v~i~----~~dt~~~L~~r~~~~e~----~~l~~av~~~ 270 (287)
T 3nrb_A 217 LIGATAHFVTADLDEGPIIAQ---DVEHVS----HRDSAEDLVRKGRDIER----RVLSRAVLLF 270 (287)
T ss_dssp EEEEEEEECCSSSSCCCEEEE---EEEECC----TTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred eEEEEEEEECCCCcCCCEEEE---EEEecC----CCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 88876532 33333333332 222332 45578888877766543 3444444443
No 92
>3obi_A Formyltetrahydrofolate deformylase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.95A {Rhodopseudomonas palustris}
Probab=26.08 E-value=2.5e+02 Score=25.20 Aligned_cols=115 Identities=12% Similarity=0.113 Sum_probs=70.4
Q ss_pred HHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCc
Q 045998 238 IDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVP 317 (408)
Q Consensus 238 ~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP 317 (408)
-.++++.|++.+..++...+... -||+.+.+..+.++.-+ |+++ .=...|.+.+..|+.+|+.
T Consensus 155 ~~~~~~~l~~~~~Dlivlagy~~-----il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~A~~~G~~ 217 (288)
T 3obi_A 155 EAAITALIAQTHTDLVVLARYMQ-----ILSDEMSARLAGRCINI----------HHSF--LPGFKGAKPYHQAFDRGVK 217 (288)
T ss_dssp HHHHHHHHHHHTCCEEEESSCCS-----CCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCHHHHHHHHTCS
T ss_pred HHHHHHHHHhcCCCEEEhhhhhh-----hCCHHHHhhhcCCeEEe----------Cccc--ccCCCCchHHHHHHHcCCC
Confidence 34578888888888888877643 57777776665544333 2222 2234689999999999999
Q ss_pred eeeccCC--CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 045998 318 VIAYPEW--TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAW 380 (408)
Q Consensus 318 ~i~~P~~--~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 380 (408)
..++-.+ .+..+...-+.. .-+.+. ..-|.++|.+.+.++-. .-|.+..+.+
T Consensus 218 ~~G~Tvh~v~~~~D~GpIi~Q---~~v~i~----~~dt~~~L~~r~~~~e~----~~l~~av~~~ 271 (288)
T 3obi_A 218 LIGATAHYVTSALDEGPIIDQ---DVERIS----HRDTPADLVRKGRDIER----RVLSRALHYH 271 (288)
T ss_dssp EEEEEEEECCSSTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred EEEEEEEEECCCCcCCCeEEE---EEEecC----CCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 8887653 233333333332 223332 45678888877766543 3444444443
No 93
>3lyh_A Cobalamin (vitamin B12) biosynthesis CBIX protein; structural genomics, joint center for structural genomics, protein structure initiative; HET: MSE; 1.60A {Marinobacter aquaeolei}
Probab=25.67 E-value=1.1e+02 Score=23.40 Aligned_cols=37 Identities=14% Similarity=0.182 Sum_probs=25.0
Q ss_pred CCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEE
Q 045998 219 PSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWV 255 (408)
Q Consensus 219 ~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~ 255 (408)
+..+|+|+.||......+.+..+++.+++....|.+.
T Consensus 5 ~~alllv~HGS~~~~~~~~~~~l~~~l~~~~~~V~~a 41 (126)
T 3lyh_A 5 PHQIILLAHGSSDARWCETFEKLAEPTVESIENAAIA 41 (126)
T ss_dssp CEEEEEEECCCSCHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred CcEEEEEeCCCCCHHHHHHHHHHHHHHHhhcCCEEEE
Confidence 3469999999975333456777888887644455443
No 94
>3a10_A Response regulator; phosphoacceptor, signaling protein; HET: MSE PG4; 1.63A {Thermotoga maritima} PDB: 3a0r_B* 3a0u_A*
Probab=25.64 E-value=1.3e+02 Score=21.57 Aligned_cols=40 Identities=18% Similarity=0.121 Sum_probs=24.6
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEec
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWI 90 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~ 90 (408)
.+.++.+.. .+||+||.|..++ .+..+.+.+ ++|.+.++.
T Consensus 35 ~~a~~~~~~--~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 81 (116)
T 3a10_A 35 EEALKKFFS--GNYDLVILDIEMPGISGLEVAGEIRKKKKDAKIILLTA 81 (116)
T ss_dssp HHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEES
T ss_pred HHHHHHHhc--CCCCEEEEECCCCCCCHHHHHHHHHccCCCCeEEEEEC
Confidence 344444443 4799999998764 455555433 477776644
No 95
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=25.28 E-value=36 Score=28.84 Aligned_cols=31 Identities=10% Similarity=0.174 Sum_probs=25.1
Q ss_pred cCcceEEeccCcchHHHHHHcCCceeeccCCC
Q 045998 294 AAVSCFLTHCGWNSTLETVAAGVPVIAYPEWT 325 (408)
Q Consensus 294 ~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~ 325 (408)
.....+|+.||....+..- .++|+|-+|..+
T Consensus 50 ~~~dVIISRGgta~~lr~~-~~iPVV~I~~s~ 80 (196)
T 2q5c_A 50 DEVDAIISRGATSDYIKKS-VSIPSISIKVTR 80 (196)
T ss_dssp TTCSEEEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CCCeEEEECChHHHHHHHh-CCCCEEEEcCCH
Confidence 3334499999999999875 579999999865
No 96
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=25.20 E-value=2.7e+02 Score=23.77 Aligned_cols=101 Identities=9% Similarity=0.078 Sum_probs=57.2
Q ss_pred hhhhhhhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEeccc
Q 045998 207 CIEIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCS 286 (408)
Q Consensus 207 ~~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~p 286 (408)
-.+|-++|.++ ++..||-|.. ....+..++..+.+-+++=+.-.-... ..+..+. ......+..+
T Consensus 58 A~~lg~~La~~---g~~lVsGGg~-----GiM~aa~~gAl~~gG~~iGV~~~~P~~---~~~~~~~----t~~~~~~~f~ 122 (217)
T 1wek_A 58 GYRLGRALAEA---GFGVVTGGGP-----GVMEAVNRGAYEAGGVSVGLNIELPHE---QKPNPYQ----THALSLRYFF 122 (217)
T ss_dssp HHHHHHHHHHH---TCEEEECSCS-----HHHHHHHHHHHHTTCCEEEEEECCTTC---CCCCSCC----SEEEEESCHH
T ss_pred HHHHHHHHHHC---CCEEEeCChh-----hHHHHHHHHHHHcCCCEEEEeeCCcch---hhccccC----CcCcccCCHH
Confidence 45566777764 4677777653 345666666666666666553211101 1111111 2223445566
Q ss_pred HH-HHhcccCcceEEeccCcchHHHHHH----------cCCceeecc
Q 045998 287 QE-KVLMHAAVSCFLTHCGWNSTLETVA----------AGVPVIAYP 322 (408)
Q Consensus 287 q~-~lL~h~~v~~fitHgG~~s~~eal~----------~GvP~i~~P 322 (408)
+. .++...+-+.++--||.||+-|... +++|++.+-
T Consensus 123 ~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~ 169 (217)
T 1wek_A 123 VRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLD 169 (217)
T ss_dssp HHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEEC
T ss_pred HHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeC
Confidence 55 4454444456777899999877632 579999885
No 97
>1v5e_A Pyruvate oxidase; oxidoreductase, flavoprotein; HET: FAD; 1.60A {Aerococcus viridans} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 2dji_A* 1v5f_A* 1v5g_A*
Probab=25.04 E-value=94 Score=31.11 Aligned_cols=80 Identities=14% Similarity=0.104 Sum_probs=45.0
Q ss_pred HHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHH--HH-------hcccCcceEEeccC----
Q 045998 238 IDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQE--KV-------LMHAAVSCFLTHCG---- 304 (408)
Q Consensus 238 ~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~--~l-------L~h~~v~~fitHgG---- 304 (408)
.+.+++.|.+.|.+.++.+...... .+-+.+.+ ..+.+..+. +.++ +. ....+.+++++|.|
T Consensus 7 a~~lv~~L~~~GV~~vfg~PG~~~~---~l~~al~~-~~~~i~~i~-~~~E~~Aa~~A~GyAr~tgk~~v~~~tsGpG~~ 81 (590)
T 1v5e_A 7 GLAVMKILESWGADTIYGIPSGTLS---SLMDAMGE-EENNVKFLQ-VKHEEVGAMAAVMQSKFGGNLGVTVGSGGPGAS 81 (590)
T ss_dssp HHHHHHHHHHTTCCEEEECCCTTTH---HHHTTSSS-TTCCCEEEE-CSSHHHHHHHHHHHHHTTCCCCEEEECTTHHHH
T ss_pred HHHHHHHHHHcCCCEEEEecCCchH---HHHHHHHh-cCCCCeEEe-eCCHHHHHHHHHHHHHHHCCCEEEEeCcChHHH
Confidence 3567777777787777765443221 11111111 001233322 2222 11 22334566999998
Q ss_pred --cchHHHHHHcCCceeecc
Q 045998 305 --WNSTLETVAAGVPVIAYP 322 (408)
Q Consensus 305 --~~s~~eal~~GvP~i~~P 322 (408)
.+.+.||.+.++|+|++-
T Consensus 82 N~~~gl~~A~~~~vPll~It 101 (590)
T 1v5e_A 82 HLINGLYDAAMDNIPVVAIL 101 (590)
T ss_dssp TTHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHhcCCCEEEEc
Confidence 678999999999999973
No 98
>3bbn_B Ribosomal protein S2; small ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea} SCOP: i.1.1.1
Probab=24.98 E-value=49 Score=28.93 Aligned_cols=29 Identities=14% Similarity=-0.005 Sum_probs=22.6
Q ss_pred CccEEE-ECCCC-CcHHHHHHHcCCCeEEEe
Q 045998 61 KKSCII-TNPFM-PWVPDVAAEHKIPCAVLW 89 (408)
Q Consensus 61 ~~D~vI-~D~~~-~~~~~vA~~lgIP~v~~~ 89 (408)
.||+|| .|+.. .-+..=|.++|||+|.+.
T Consensus 157 ~Pdll~v~Dp~~e~~ai~EA~~l~IPvIaiv 187 (231)
T 3bbn_B 157 LPDIVIIVDQQEEYTALRECITLGIPTICLI 187 (231)
T ss_dssp CCSEEEESCTTTTHHHHHHHHTTTCCEEECC
T ss_pred CCCEEEEeCCccccHHHHHHHHhCCCEEEEe
Confidence 589876 47765 467777999999999874
No 99
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=24.85 E-value=3.1e+02 Score=23.07 Aligned_cols=45 Identities=11% Similarity=0.070 Sum_probs=27.6
Q ss_pred CeEEEecccHH-H-HhcccCcceEEeccCcchHHHHHH---------cCCceeeccC
Q 045998 278 RGLVVKWCSQE-K-VLMHAAVSCFLTHCGWNSTLETVA---------AGVPVIAYPE 323 (408)
Q Consensus 278 n~~v~~w~pq~-~-lL~h~~v~~fitHgG~~s~~eal~---------~GvP~i~~P~ 323 (408)
...+++....+ . +..+++. .++--||.||+-|... +++|++.+-.
T Consensus 100 ~~i~~~~~~~Rk~~m~~~sda-~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~ 155 (199)
T 3qua_A 100 ELIVTDTMRERKREMEHRSDA-FIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDP 155 (199)
T ss_dssp EEEEESSHHHHHHHHHHHCSE-EEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECT
T ss_pred eeEEcCCHHHHHHHHHHhcCc-cEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcC
Confidence 34555555433 3 3445554 4566788888877642 5899998753
No 100
>1ybh_A Acetolactate synthase, chloroplast; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: CIE NHE FAD P22; 2.50A {Arabidopsis thaliana} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1yhy_A* 1yhz_A* 1yi0_A* 1yi1_A* 1z8n_A* 3ea4_A* 3e9y_A*
Probab=24.61 E-value=1.7e+02 Score=29.16 Aligned_cols=28 Identities=14% Similarity=0.259 Sum_probs=23.0
Q ss_pred CcceEEeccCc------chHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGW------NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~------~s~~eal~~GvP~i~~P 322 (408)
+.+++++|.|- +++.||-+.++|+|++-
T Consensus 75 ~p~v~~~TsGpG~~N~~~gv~~A~~~~vPll~it 108 (590)
T 1ybh_A 75 KPGICIATSGPGATNLVSGLADALLDSVPLVAIT 108 (590)
T ss_dssp SCEEEEECTTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCEEEEeccCchHHHHHHHHHHHHhhCCCEEEEe
Confidence 44559999994 47899999999999984
No 101
>2x7j_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene -1-carboxylate synthase; transferase, metal-binding; HET: TPP; 2.35A {Bacillus subtilis}
Probab=24.48 E-value=2e+02 Score=28.76 Aligned_cols=120 Identities=13% Similarity=-0.038 Sum_probs=67.8
Q ss_pred HHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecc-cHHHH-------hcccCcceEEeccCc--
Q 045998 236 NQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC-SQEKV-------LMHAAVSCFLTHCGW-- 305 (408)
Q Consensus 236 ~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~-pq~~l-------L~h~~v~~fitHgG~-- 305 (408)
...+.+++.|++.|.+.+..+.+.... .+-+.+.+ .+.+..+.-. .|.+. ....+.+++++|.|-
T Consensus 32 ~~a~~lv~~L~~~GV~~vFg~PG~~~~---~l~dal~~--~~~i~~i~~~hE~~Aa~aA~GyAr~tgkpgv~~~TsGpG~ 106 (604)
T 2x7j_A 32 HYIGSFIDEFALSGITDAVVCPGSRST---PLAVLCAA--HPDISVHVQIDERSAGFFALGLAKAKQRPVLLICTSGTAA 106 (604)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCSTTH---HHHHHHHH--CTTCEEEECSSHHHHHHHHHHHHHHHTSCEEEEECSSHHH
T ss_pred HHHHHHHHHHHHcCCCEEEECcCcccH---HHHHHHHh--CCCceEEEecChHHHHHHHHHHHHhhCCCEEEEECChhHH
Confidence 456778888888888888766544322 22222221 1234443211 12211 122345569999995
Q ss_pred ----chHHHHHHcCCceeeccC-------------CCChhhhHHhhhceeeeEEEeecCCCCCc-------CHHHHHHHH
Q 045998 306 ----NSTLETVAAGVPVIAYPE-------------WTDQPTDAKLLVDVFKIGVRMRNEEDGTL-------SIQQVQRCI 361 (408)
Q Consensus 306 ----~s~~eal~~GvP~i~~P~-------------~~DQ~~na~~v~~~~g~G~~l~~~~~~~~-------~~~~l~~~i 361 (408)
+.+.||-+.++|+|++-- ..||..-.+-+++ ....+.. ..- -.+.+.+|+
T Consensus 107 ~N~~~gia~A~~~~vPlv~ItG~~~~~~~g~~~~Q~~d~~~~~~~~tk---~~~~v~~---~~~~~~~~~~~~~~i~~A~ 180 (604)
T 2x7j_A 107 ANFYPAVVEAHYSRVPIIVLTADRPHELREVGAPQAINQHFLFGNFVK---FFTDSAL---PEESPQMLRYIRTLASRAA 180 (604)
T ss_dssp HTTHHHHHHHHHHTCCEEEEEEECCGGGSSSCCTTCCCCTTTTGGGSS---CEEECCC---CCCSHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHhhcCCCEEEEeCCCCHHHhCCCCCCcCcHHHHhhhhee---eeeecCC---CcccchhHHHHHHHHHHHH
Confidence 688999999999999851 2355555555554 3444442 121 345667777
Q ss_pred HHHhc
Q 045998 362 DEATQ 366 (408)
Q Consensus 362 ~~vl~ 366 (408)
+..+.
T Consensus 181 ~~A~~ 185 (604)
T 2x7j_A 181 GEAQK 185 (604)
T ss_dssp HHHHS
T ss_pred HHhhC
Confidence 65553
No 102
>2xvy_A Chelatase, putative; metal binding protein; HET: HEM; 1.70A {Desulfovibrio vulgaris} PDB: 2xvx_A* 2xvz_A*
Probab=24.41 E-value=87 Score=27.63 Aligned_cols=39 Identities=13% Similarity=0.434 Sum_probs=31.1
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHh--CCCCEEEEEec
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAALIN--TKRPFLWVIRS 258 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al~~--~~~~~iw~~~~ 258 (408)
..+|+|++||...-..+.+..+.+.+++ .+..|-|.+..
T Consensus 10 ~aillv~hGS~~~~~~~~~~~~~~~l~~~~~~~~V~~af~~ 50 (269)
T 2xvy_A 10 TGILLVAFGTSVEEARPALDKMGDRVRAAHPDIPVRWAYTA 50 (269)
T ss_dssp EEEEEEECCCCCTTTTHHHHHHHHHHHHHCTTSCEEEEESC
T ss_pred ceEEEEeCCCCcHHHHHHHHHHHHHHHHHCCCCeEEeehhh
Confidence 4799999999886666688888888876 35788888664
No 103
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=24.29 E-value=3.1e+02 Score=22.86 Aligned_cols=43 Identities=9% Similarity=-0.025 Sum_probs=27.0
Q ss_pred eEEEecccHH--HHhcccCcceEEeccCcchHHHHH---------HcCCceeecc
Q 045998 279 GLVVKWCSQE--KVLMHAAVSCFLTHCGWNSTLETV---------AAGVPVIAYP 322 (408)
Q Consensus 279 ~~v~~w~pq~--~lL~h~~v~~fitHgG~~s~~eal---------~~GvP~i~~P 322 (408)
..+++....+ .++.+++ ..++--||.||+-|.. .+++|++.+-
T Consensus 92 ~i~~~~~~~Rk~~m~~~sd-a~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln 145 (189)
T 3sbx_A 92 LVVTETMWERKQVMEDRAN-AFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLD 145 (189)
T ss_dssp EEEESSHHHHHHHHHHHCS-EEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEEC
T ss_pred eEEcCCHHHHHHHHHHHCC-EEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEec
Confidence 3445555444 3444555 3456678888887764 2689998874
No 104
>3cg0_A Response regulator receiver modulated diguanylate with PAS/PAC sensor; signal receiver domain, diguanylate cyclase; 2.15A {Desulfovibrio desulfuricans subsp}
Probab=24.14 E-value=89 Score=23.47 Aligned_cols=42 Identities=7% Similarity=0.034 Sum_probs=26.5
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC---cHHHHHHH----cCCCeEEEecc
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP---WVPDVAAE----HKIPCAVLWIQ 91 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~---~~~~vA~~----lgIP~v~~~~~ 91 (408)
.++.++.+.+ .+||+||.|..++ .+..+++. -++|.++++..
T Consensus 43 ~~~a~~~~~~--~~~dlii~d~~~~~~~~g~~~~~~l~~~~~~~ii~ls~~ 91 (140)
T 3cg0_A 43 GEEAVRCAPD--LRPDIALVDIMLCGALDGVETAARLAAGCNLPIIFITSS 91 (140)
T ss_dssp HHHHHHHHHH--HCCSEEEEESSCCSSSCHHHHHHHHHHHSCCCEEEEECC
T ss_pred HHHHHHHHHh--CCCCEEEEecCCCCCCCHHHHHHHHHhCCCCCEEEEecC
Confidence 3455555543 4699999997653 45555544 36888877543
No 105
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=24.08 E-value=1.1e+02 Score=23.55 Aligned_cols=43 Identities=16% Similarity=0.052 Sum_probs=27.2
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEecch
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWIQA 92 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~~ 92 (408)
..+.++.+.. .+||+||.|..++ -+..+.+.+ ++|.++++...
T Consensus 40 ~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~~ 89 (154)
T 2rjn_A 40 PLDALEALKG--TSVQLVISDMRMPEMGGEVFLEQVAKSYPDIERVVISGYA 89 (154)
T ss_dssp HHHHHHHHTT--SCCSEEEEESSCSSSCHHHHHHHHHHHCTTSEEEEEECGG
T ss_pred HHHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCcEEEEecCC
Confidence 3555555544 4799999998764 455555433 57877775443
No 106
>1q6z_A BFD, BFDC, benzoylformate decarboxylase; lyase, carbon-carbon, mandelate catabolism, T thiazolone diphosphate, inhibitor, high resolution; HET: TZD; 1.00A {Pseudomonas putida} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1po7_A* 1pi3_A* 3fsj_X* 1mcz_A* 1bfd_A* 2fwn_A* 3fzn_A* 2fn3_A* 2v3w_A* 1yno_A* 3f6b_X* 3f6e_X*
Probab=24.03 E-value=1.8e+02 Score=28.37 Aligned_cols=77 Identities=9% Similarity=-0.034 Sum_probs=43.6
Q ss_pred HHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecc-cHHHH-------hcccCcceEEeccC-----
Q 045998 238 IDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC-SQEKV-------LMHAAVSCFLTHCG----- 304 (408)
Q Consensus 238 ~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~-pq~~l-------L~h~~v~~fitHgG----- 304 (408)
.+.+++.|++.|.+.+..+...... . +.+.+.+++..+.-. .|.+. ....+.+++++|.|
T Consensus 5 a~~l~~~L~~~GV~~vfg~PG~~~~---~----l~~al~~~i~~i~~~~E~~Aa~~A~Gyar~tg~~~v~~~tsGpG~~N 77 (528)
T 1q6z_A 5 HGTTYELLRRQGIDTVFGNPGSNAL---P----FLKDFPEDFRYILALQEACVVGIADGYAQASRKPAFINLHSAAGTGN 77 (528)
T ss_dssp HHHHHHHHHHTTCCEEEECCCGGGH---H----HHTTCCTTCEEEECSSHHHHHHHHHHHHHHHTSCEEEEEEHHHHHHH
T ss_pred HHHHHHHHHHCCCCEEEECCCcchH---H----HHHHHhhcCcEEEECcHHHHHHHHHHHHHHhCCCEEEEEcCChHHHH
Confidence 3567788888888877765443211 1 222222334333211 12211 11233445888887
Q ss_pred -cchHHHHHHcCCceeec
Q 045998 305 -WNSTLETVAAGVPVIAY 321 (408)
Q Consensus 305 -~~s~~eal~~GvP~i~~ 321 (408)
.+.+.||-+.++|+|++
T Consensus 78 ~~~~l~~A~~~~~Pll~i 95 (528)
T 1q6z_A 78 AMGALSNAWNSHSPLIVT 95 (528)
T ss_dssp THHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHhhcCCCEEEE
Confidence 45789999999999999
No 107
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=24.01 E-value=65 Score=27.99 Aligned_cols=29 Identities=17% Similarity=0.154 Sum_probs=24.7
Q ss_pred cCcceEEeccCcchHHHHHHcCCceeeccCCC
Q 045998 294 AAVSCFLTHCGWNSTLETVAAGVPVIAYPEWT 325 (408)
Q Consensus 294 ~~v~~fitHgG~~s~~eal~~GvP~i~~P~~~ 325 (408)
+++ +|+.||....+..- .++|+|-++..+
T Consensus 64 ~dV--IISRGgta~~Lr~~-~~iPVV~I~vs~ 92 (225)
T 2pju_A 64 CDA--IIAAGSNGAYLKSR-LSVPVILIKPSG 92 (225)
T ss_dssp CSE--EEEEHHHHHHHHTT-CSSCEEEECCCH
T ss_pred CeE--EEeCChHHHHHHhh-CCCCEEEecCCH
Confidence 556 99999999999975 589999999864
No 108
>3n0v_A Formyltetrahydrofolate deformylase; formyl transferase, ACT domain, structural genomics, joint C structural genomics, JCSG; HET: MSE; 2.25A {Pseudomonas putida}
Probab=23.98 E-value=2.9e+02 Score=24.70 Aligned_cols=114 Identities=7% Similarity=0.054 Sum_probs=65.9
Q ss_pred HHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCce
Q 045998 239 DSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPV 318 (408)
Q Consensus 239 ~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~ 318 (408)
.++++.|++.+..++...+... -||+.+.+..+.++.-+ |+++ .=...|.+.+..|+.+|+..
T Consensus 156 ~~~~~~l~~~~~Dlivla~y~~-----il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~~G~~~ 218 (286)
T 3n0v_A 156 RKVLQVIEETGAELVILARYMQ-----VLSPELCRRLDGWAINI----------HHSL--LPGFKGAKPYHQAYNKGVKM 218 (286)
T ss_dssp HHHHHHHHHHTCSEEEESSCCS-----CCCHHHHHHTTTSEEEE----------EECS--STTCCCSCHHHHHHHHTCSE
T ss_pred HHHHHHHHhcCCCEEEeccccc-----ccCHHHHhhhcCCeEEe----------cccc--ccCCCCccHHHHHHHcCCCe
Confidence 3566777777777777766543 56666666554443332 2222 22345889999999999998
Q ss_pred eeccCCC--ChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHH
Q 045998 319 IAYPEWT--DQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAW 380 (408)
Q Consensus 319 i~~P~~~--DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l 380 (408)
.++-.+. +..+....+.. --+.+. ..-|.++|.+.+.++-. .-|.+..+.+
T Consensus 219 ~G~Tvh~v~~~lD~GpIi~Q---~~~~i~----~~dt~~~L~~r~~~~e~----~~l~~av~~~ 271 (286)
T 3n0v_A 219 VGATAHYINNDLDEGPIIAQ---GVEVVD----HSHYPEDLIAKGRDIEC----LTLARAVGYH 271 (286)
T ss_dssp EEEEEEECCSSTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHHHH----HHHHHHHHHH
T ss_pred EEEEEEEEcCCCCCCceeEE---EEEEcC----CCCCHHHHHHHHHHHHH----HHHHHHHHHH
Confidence 8876532 33333333332 222332 45678888877765543 3444444443
No 109
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=23.73 E-value=1.4e+02 Score=22.09 Aligned_cols=40 Identities=13% Similarity=0.046 Sum_probs=24.4
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-------CCCeEEEec
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-------KIPCAVLWI 90 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~ 90 (408)
.+.++.+.+ .+||+||.|..++ -+..+.+.+ ++|.+.++.
T Consensus 37 ~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~pii~~s~ 85 (133)
T 3nhm_A 37 ASGLQQALA--HPPDVLISDVNMDGMDGYALCGHFRSEPTLKHIPVIFVSG 85 (133)
T ss_dssp HHHHHHHHH--SCCSEEEECSSCSSSCHHHHHHHHHHSTTTTTCCEEEEES
T ss_pred HHHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhCCccCCCCEEEEeC
Confidence 444444444 4799999998764 455554321 577777643
No 110
>2qr3_A Two-component system response regulator; structural genomics, signal receiver, PSI-2, protein structu initiative; 1.80A {Bacteroides fragilis}
Probab=23.52 E-value=1.1e+02 Score=22.85 Aligned_cols=41 Identities=10% Similarity=0.011 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC-------cHHHHHHHc-----CCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP-------WVPDVAAEH-----KIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~-------~~~~vA~~l-----gIP~v~~~~~ 91 (408)
.+.++.+.+ .+||+||.|..+. .+..+.+.+ ++|.++++..
T Consensus 37 ~~a~~~l~~--~~~dlvi~d~~~~~~~~~~~~g~~~~~~l~~~~~~~~ii~ls~~ 89 (140)
T 2qr3_A 37 VSLSTVLRE--ENPEVVLLDMNFTSGINNGNEGLFWLHEIKRQYRDLPVVLFTAY 89 (140)
T ss_dssp HHHHHHHHH--SCEEEEEEETTTTC-----CCHHHHHHHHHHHCTTCCEEEEEEG
T ss_pred HHHHHHHHc--CCCCEEEEeCCcCCCCCCCccHHHHHHHHHhhCcCCCEEEEECC
Confidence 444444444 4699999997654 344444432 5888877543
No 111
>3lou_A Formyltetrahydrofolate deformylase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; HET: MSE; 1.90A {Burkholderia mallei}
Probab=23.31 E-value=4.1e+02 Score=23.84 Aligned_cols=103 Identities=14% Similarity=0.157 Sum_probs=62.6
Q ss_pred HHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEEeccCcchHHHHHHcCCce
Q 045998 239 DSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFLTHCGWNSTLETVAAGVPV 318 (408)
Q Consensus 239 ~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fitHgG~~s~~eal~~GvP~ 318 (408)
.++++.|++.+..++...+... -||+.+.+..+.++.-+ |+++ .=...|.+.+..|+.+|+..
T Consensus 161 ~~~~~~l~~~~~Dlivla~y~~-----il~~~~l~~~~~~~iNi----------HpSl--LP~~rG~~p~~~Ai~~G~~~ 223 (292)
T 3lou_A 161 AQWLDVFETSGAELVILARYMQ-----VLSPEASARLANRAINI----------HHSF--LPGFKGAKPYHQAHARGVKL 223 (292)
T ss_dssp HHHHHHHHHHTCSEEEESSCCS-----CCCHHHHHHTTTSEEEE----------EEEC--SSCCCSSCHHHHHHHHTCSE
T ss_pred HHHHHHHHHhCCCEEEecCchh-----hCCHHHHhhhcCCeEEe----------CCCc--CcCCCCccHHHHHHHcCCCe
Confidence 4567777777777777766543 56777766655443332 2222 22356899999999999998
Q ss_pred eeccCC--CChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHh
Q 045998 319 IAYPEW--TDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEAT 365 (408)
Q Consensus 319 i~~P~~--~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl 365 (408)
.++-.+ .+..+...-+.. .-+.+. ..-|.++|.+.+.++-
T Consensus 224 ~G~Tvh~v~~~lD~G~Ii~Q---~~v~i~----~~dt~~~L~~r~~~~e 265 (292)
T 3lou_A 224 IGATAHFVTDDLDEGPIIEQ---VVERVD----HSYRPEQLLAVGRDVE 265 (292)
T ss_dssp EEEEEEECCSSTTCSCEEEE---EEEECC----TTCCHHHHHHHHHHHH
T ss_pred EEEEEEEEcCCCcCCCEEEE---EEEEcC----CCCCHHHHHHHHHHHH
Confidence 887653 233333333332 223333 4567888887776554
No 112
>3ors_A N5-carboxyaminoimidazole ribonucleotide mutase; isomerase, isomerase,biosynthetic protein; 1.45A {Staphylococcus aureus subsp}
Probab=23.30 E-value=2.5e+02 Score=22.94 Aligned_cols=144 Identities=13% Similarity=0.097 Sum_probs=73.6
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEE
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFL 300 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fi 300 (408)
+.|-|-+||.. +....++....|+..|.++=..+-... .+|+.+.+- + .=.....+++||
T Consensus 4 ~~V~Iimgs~S--D~~v~~~a~~~l~~~gi~~ev~V~SaH-----R~p~~~~~~----------~---~~a~~~g~~ViI 63 (163)
T 3ors_A 4 MKVAVIMGSSS--DWKIMQESCNMLDYFEIPYEKQVVSAH-----RTPKMMVQF----------A---SEARERGINIII 63 (163)
T ss_dssp CCEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT-----TSHHHHHHH----------H---HHTTTTTCCEEE
T ss_pred CeEEEEECcHH--HHHHHHHHHHHHHHcCCCEEEEEECCc-----CCHHHHHHH----------H---HHHHhCCCcEEE
Confidence 34666678876 567788889999999988655444433 234332210 0 001111233488
Q ss_pred eccCcc----hHHHHHHcCCceeeccCCCChh--hhH-Hhhhc-eeeeEEEe-ecCCCCCcCHHHHHHHHHHHhcCCcHH
Q 045998 301 THCGWN----STLETVAAGVPVIAYPEWTDQP--TDA-KLLVD-VFKIGVRM-RNEEDGTLSIQQVQRCIDEATQGLNAT 371 (408)
Q Consensus 301 tHgG~~----s~~eal~~GvP~i~~P~~~DQ~--~na-~~v~~-~~g~G~~l-~~~~~~~~~~~~l~~~i~~vl~~~~~~ 371 (408)
.=.|.. ++.-++ .-+|+|++|...... ..+ .-+.. --|+.+.. ..++.+..+.--+...|-. +.| +
T Consensus 64 a~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~dsLlS~vqmp~GvPVatV~I~~a~~~nAa~lAa~Il~-~~d---~ 138 (163)
T 3ors_A 64 AGAGGAAHLPGMVASL-TTLPVIGVPIETKSLKGIDSLLSIVQMPGGIPVATTAIGAAGAKNAGILAARMLS-IQN---P 138 (163)
T ss_dssp EEEESSCCHHHHHHHH-CSSCEEEEEECCTTTTTHHHHHHHHTCCTTSCCEECCSTHHHHHHHHHHHHHHHH-TTC---T
T ss_pred EECCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCceEEEEcCCcccHHHHHHHHHHHh-CCC---H
Confidence 877754 444443 569999999764321 111 11111 12442222 1100011222233222211 234 6
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 045998 372 QMKKRAVAWKEAAKKALE 389 (408)
Q Consensus 372 ~~~~~a~~l~~~~~~a~~ 389 (408)
.++++.+..++..++.+.
T Consensus 139 ~l~~kl~~~r~~~~~~v~ 156 (163)
T 3ors_A 139 SLVEKLNQYESSLIQKVE 156 (163)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 888888888888776543
No 113
>2rdm_A Response regulator receiver protein; structural genomics, unknown function, PSI-2, protein struct initiative; HET: MSE; 1.76A {Sinorhizobium medicae}
Probab=23.23 E-value=1.3e+02 Score=22.14 Aligned_cols=41 Identities=15% Similarity=0.014 Sum_probs=24.9
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC---cHHHHHHHc-----CCCeEEEec
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP---WVPDVAAEH-----KIPCAVLWI 90 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~---~~~~vA~~l-----gIP~v~~~~ 90 (408)
.+.++.+.+. .+||+||.|..++ .+..+++.+ ++|.++++.
T Consensus 39 ~~a~~~l~~~-~~~dlvi~d~~l~~~~~g~~~~~~l~~~~~~~~ii~~s~ 87 (132)
T 2rdm_A 39 AKAIEMLKSG-AAIDGVVTDIRFCQPPDGWQVARVAREIDPNMPIVYISG 87 (132)
T ss_dssp HHHHHHHHTT-CCCCEEEEESCCSSSSCHHHHHHHHHHHCTTCCEEEEES
T ss_pred HHHHHHHHcC-CCCCEEEEeeeCCCCCCHHHHHHHHHhcCCCCCEEEEeC
Confidence 4455555431 2799999998664 345555433 577777643
No 114
>4e7p_A Response regulator; DNA binding, cytosol, transcription regulator; 1.89A {Streptococcus pneumoniae} PDB: 4e7o_A
Probab=23.23 E-value=1.3e+02 Score=23.10 Aligned_cols=42 Identities=17% Similarity=-0.004 Sum_probs=27.3
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEecc
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWIQ 91 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 91 (408)
.++.++.+.+ .+||+||.|..++ .+..+++.+ ++|.++++..
T Consensus 55 ~~~al~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 103 (150)
T 4e7p_A 55 GQEAIQLLEK--ESVDIAILDVEMPVKTGLEVLEWIRSEKLETKVVVVTTF 103 (150)
T ss_dssp HHHHHHHHTT--SCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHHhhc--cCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEeCC
Confidence 4566666654 5799999998763 455555432 5777776543
No 115
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=23.20 E-value=1.2e+02 Score=22.45 Aligned_cols=43 Identities=14% Similarity=0.077 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEecch
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWIQA 92 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~~ 92 (408)
.++.++.+.+ .+||+||.|..++ .+..+.+.+ ++|.++++...
T Consensus 40 ~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~~t~~~ 89 (130)
T 3eod_A 40 GVDALELLGG--FTPDLMICDIAMPRMNGLKLLEHIRNRGDQTPVLVISATE 89 (130)
T ss_dssp HHHHHHHHTT--CCCSEEEECCC-----CHHHHHHHHHTTCCCCEEEEECCC
T ss_pred HHHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEEcCC
Confidence 4555555544 5799999998764 344444432 57877775443
No 116
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=22.99 E-value=1.2e+02 Score=22.70 Aligned_cols=41 Identities=5% Similarity=0.084 Sum_probs=25.6
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-------CCCeEEEec
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-------KIPCAVLWI 90 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~ 90 (408)
.++.++.+.+ .+||+||.|..++ -+..+.+.+ ++|.++++.
T Consensus 39 ~~~a~~~l~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~~~ii~~s~ 88 (140)
T 3grc_A 39 AAQALEQVAR--RPYAAMTVDLNLPDQDGVSLIRALRRDSRTRDLAIVVVSA 88 (140)
T ss_dssp HHHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHTSGGGTTCEEEEECT
T ss_pred HHHHHHHHHh--CCCCEEEEeCCCCCCCHHHHHHHHHhCcccCCCCEEEEec
Confidence 3445555544 5799999998764 455555432 467776644
No 117
>3hww_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- carboxylate synthase; menaquinone, THDP, Mg, vitamin K2, carboxylase, magnesium; HET: AKG; 1.95A {Escherichia coli k-12} PDB: 3flm_A* 3hwx_A* 2jlc_A* 2jla_A*
Probab=22.72 E-value=78 Score=31.41 Aligned_cols=28 Identities=14% Similarity=0.177 Sum_probs=23.4
Q ss_pred CcceEEeccCcc------hHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGWN------STLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~~------s~~eal~~GvP~i~~P 322 (408)
+.+++++|.|-| .+.||-+.++|+|++-
T Consensus 71 ~pgv~~~TsGpG~~N~~~gia~A~~d~vPll~it 104 (556)
T 3hww_A 71 QPVAVIVTSGTAVANLYPALIEAGLTGEKLILLT 104 (556)
T ss_dssp SCEEEEECSSHHHHTTHHHHHHHHHHCCCEEEEE
T ss_pred CCEEEEECCCcHHHhhhHHHHHHHHhCCCeEEEe
Confidence 355699999955 8899999999999974
No 118
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=22.67 E-value=1.1e+02 Score=22.00 Aligned_cols=33 Identities=21% Similarity=0.287 Sum_probs=22.3
Q ss_pred CCccEEEECCCCC--cHHHHHHH----cCCCeEEEecch
Q 045998 60 KKKSCIITNPFMP--WVPDVAAE----HKIPCAVLWIQA 92 (408)
Q Consensus 60 ~~~D~vI~D~~~~--~~~~vA~~----lgIP~v~~~~~~ 92 (408)
.+||+||.|..++ .+..+++. -.+|.+.++...
T Consensus 44 ~~~dlvl~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~~ 82 (120)
T 2a9o_A 44 EQPDIIILDLMLPEIDGLEVAKTIRKTSSVPILMLSAKD 82 (120)
T ss_dssp HCCSEEEECSSCSSSCHHHHHHHHHHHCCCCEEEEESCC
T ss_pred CCCCEEEEeccCCCCCHHHHHHHHHhCCCCCEEEEecCC
Confidence 3689999998764 45555544 358887776543
No 119
>3qxc_A Dethiobiotin synthetase; DTBS, structural genomics, ATP BIND biology, protein structure initiative, midwest center for S genomics, MCSG; HET: ATP; 1.34A {Helicobacter pylori} PDB: 3mle_A* 3qxh_A* 3qxj_A* 3qxs_A* 3qxx_A* 3qy0_A* 2qmo_A
Probab=22.55 E-value=1e+02 Score=26.96 Aligned_cols=42 Identities=17% Similarity=0.123 Sum_probs=29.4
Q ss_pred HHHHHHHhhcCCCCccEEEECCCC---------CcHHHHHHHcCCCeEEEecch
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFM---------PWVPDVAAEHKIPCAVLWIQA 92 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~---------~~~~~vA~~lgIP~v~~~~~~ 92 (408)
+.+.++++. .++|+||+|... ....++|+.++.|++.+....
T Consensus 121 I~~~~~~l~---~~~D~vlIEGagGl~~pl~~~~~~adlA~~l~~pVILV~~~~ 171 (242)
T 3qxc_A 121 LTQRLHNFT---KTYDLVIVEGAGGLCVPITLEENMLDFALKLKAKMLLISHDN 171 (242)
T ss_dssp HHHHHHHGG---GTCSEEEEECCSCTTCBSSSSCBHHHHHHHHTCEEEEEECCS
T ss_pred HHHHHHHHH---hcCCEEEEECCCCccccccccchHHHHHHHcCCCEEEEEcCC
Confidence 444445544 478999998742 245789999999999886543
No 120
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=22.40 E-value=4.2e+02 Score=23.73 Aligned_cols=24 Identities=13% Similarity=0.116 Sum_probs=15.9
Q ss_pred hhhhhhhhccCCCCceEEEecCCcc
Q 045998 207 CIEIHQWLNKKPPSSVIYISFGSLL 231 (408)
Q Consensus 207 ~~~l~~~l~~~~~~~vvyvs~GS~~ 231 (408)
|++..+|.+.-.- -.+=+++||..
T Consensus 161 Peea~~Fv~~Tgv-D~LAvaiGt~H 184 (288)
T 3q94_A 161 PAECKHLVEATGI-DCLAPALGSVH 184 (288)
T ss_dssp HHHHHHHHHHHCC-SEEEECSSCBS
T ss_pred HHHHHHHHHHHCC-CEEEEEcCccc
Confidence 7777788764222 25778888875
No 121
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=22.28 E-value=1.4e+02 Score=22.46 Aligned_cols=35 Identities=14% Similarity=0.293 Sum_probs=28.4
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCC
Q 045998 222 VIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQE 260 (408)
Q Consensus 222 vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~ 260 (408)
-||+-|.| .++.+.++...+...|.+++..+...+
T Consensus 3 qifvvfss----dpeilkeivreikrqgvrvvllysdqd 37 (162)
T 2l82_A 3 QIFVVFSS----DPEILKEIVREIKRQGVRVVLLYSDQD 37 (162)
T ss_dssp EEEEEEES----CHHHHHHHHHHHHHTTCEEEEEECCSC
T ss_pred eEEEEecC----CHHHHHHHHHHHHhCCeEEEEEecCch
Confidence 47777655 788899999999999999998887653
No 122
>1t9b_A Acetolactate synthase, mitochondrial; acetohydroxyacid synthase, herbicide, sulfonylurea, thiamin diphosphate, FAD, inhibitor; HET: 1CS P25 FAD NSP P22 YF3; 2.20A {Saccharomyces cerevisiae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1n0h_A* 1t9a_A* 1t9c_A* 1t9d_A* 1jsc_A*
Probab=22.10 E-value=2.2e+02 Score=29.01 Aligned_cols=81 Identities=10% Similarity=0.037 Sum_probs=47.0
Q ss_pred HHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecc-cHHHH-------hcccCcceEEeccCc---
Q 045998 237 QIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC-SQEKV-------LMHAAVSCFLTHCGW--- 305 (408)
Q Consensus 237 ~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~-pq~~l-------L~h~~v~~fitHgG~--- 305 (408)
..+.+++.|++.|.+.+..+-+.... .+-+.+.+ .+.+..+.-. .|.+. ...-+.+++++|.|-
T Consensus 84 ~a~~lv~~L~~~GV~~vFg~PG~~~~---pl~dal~~--~~~i~~v~~~hE~~Aa~aAdGyAr~tGkpgvv~~TsGpG~~ 158 (677)
T 1t9b_A 84 GGQIFNEMMSRQNVDTVFGYPGGAIL---PVYDAIHN--SDKFNFVLPKHEQGAGHMAEGYARASGKPGVVLVTSGPGAT 158 (677)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCGGGH---HHHHHTTT--CSSSEEECCSSHHHHHHHHHHHHHHHSSCEEEEECSTHHHH
T ss_pred HHHHHHHHHHHcCCCEEEEecCccHH---HHHHHHHh--CCCCeEEEeCChHHHHHHHHHHHHHHCCCEEEEECCChHHH
Confidence 45678888888888887765443211 11122211 1234443221 12211 112344569999995
Q ss_pred ---chHHHHHHcCCceeecc
Q 045998 306 ---NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 306 ---~s~~eal~~GvP~i~~P 322 (408)
+.+.||.+.++|+|++-
T Consensus 159 N~~~gia~A~~d~vPllvIt 178 (677)
T 1t9b_A 159 NVVTPMADAFADGIPMVVFT 178 (677)
T ss_dssp TTHHHHHHHHHHTCCEEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEe
Confidence 58899999999999984
No 123
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=21.86 E-value=2.2e+02 Score=21.75 Aligned_cols=63 Identities=13% Similarity=0.116 Sum_probs=38.4
Q ss_pred cCCceeeccCCCChhhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHH
Q 045998 314 AGVPVIAYPEWTDQPTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAK 385 (408)
Q Consensus 314 ~GvP~i~~P~~~DQ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~ 385 (408)
..+|+|++--..+.. ......+ .|+--.+. +.++.++|..+|++++.. ..++...+++++.+.
T Consensus 74 ~~~pii~ls~~~~~~-~~~~~~~-~g~~~~l~----kP~~~~~L~~~i~~~~~~---~~~~~~~~~~~~~~~ 136 (155)
T 1qkk_A 74 PDLPMILVTGHGDIP-MAVQAIQ-DGAYDFIA----KPFAADRLVQSARRAEEK---RRLVMENRSLRRAAE 136 (155)
T ss_dssp TTSCEEEEECGGGHH-HHHHHHH-TTCCEEEE----SSCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCChH-HHHHHHh-cCCCeEEe----CCCCHHHHHHHHHHHHHH---HHHHHHHHHHHHHHH
Confidence 478888875444433 3333444 56544555 478999999999999865 444444444444443
No 124
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=21.83 E-value=1e+02 Score=22.35 Aligned_cols=41 Identities=15% Similarity=0.050 Sum_probs=25.3
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 91 (408)
++.++.+.+ .+||+||.|..++ .+..+++.+ ++|.+.++..
T Consensus 37 ~~a~~~~~~--~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 84 (120)
T 1tmy_A 37 REAVEKYKE--LKPDIVTMDITMPEMNGIDAIKEIMKIDPNAKIIVCSAM 84 (120)
T ss_dssp HHHHHHHHH--HCCSEEEEECSCGGGCHHHHHHHHHHHCTTCCEEEEECT
T ss_pred HHHHHHHHh--cCCCEEEEeCCCCCCcHHHHHHHHHhhCCCCeEEEEeCC
Confidence 344444433 3689999998774 455555543 5787776544
No 125
>3jte_A Response regulator receiver protein; structural genomics, nysgrc, response regulator receiver DOM target 11226E, PSI-2; 1.90A {Clostridium thermocellum atcc 27405}
Probab=21.77 E-value=1.3e+02 Score=22.71 Aligned_cols=43 Identities=19% Similarity=0.165 Sum_probs=25.9
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 91 (408)
.+.++.+.....+||+||.|..++ .+..+.+.+ ++|.++++..
T Consensus 37 ~~a~~~~~~~~~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (143)
T 3jte_A 37 TEGLRIFTENCNSIDVVITDMKMPKLSGMDILREIKKITPHMAVIILTGH 86 (143)
T ss_dssp HHHHHHHHHTTTTCCEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEECT
T ss_pred HHHHHHHHhCCCCCCEEEEeCCCCCCcHHHHHHHHHHhCCCCeEEEEECC
Confidence 444444442125799999998764 455555433 4777766543
No 126
>3lq1_A 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene- 1-carboxylate synthase; menaquinone biosynthesis, sephchc synthase, structural genomics; 2.60A {Listeria monocytogenes}
Probab=21.65 E-value=1.4e+02 Score=29.61 Aligned_cols=81 Identities=10% Similarity=0.028 Sum_probs=44.8
Q ss_pred HHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecc-cHHHH-------hcccCcceEEeccCcc--
Q 045998 237 QIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWC-SQEKV-------LMHAAVSCFLTHCGWN-- 306 (408)
Q Consensus 237 ~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~-pq~~l-------L~h~~v~~fitHgG~~-- 306 (408)
..+.+++.|++.|.+.++.+-+.... .|-+.+.+ .+.+..+.-. .|.+. -...+.+++++|.|-|
T Consensus 13 ~a~~lv~~L~~~GV~~vFg~PG~~~~---~l~dal~~--~~~i~~i~~~hE~~Aa~aAdGyAr~tG~pgv~~~TsGpG~~ 87 (578)
T 3lq1_A 13 YLAAFIEELVQAGVKEAIISPGSRST---PLALMMAE--HPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGTAAA 87 (578)
T ss_dssp HHHHHHHHHHHTTCCEEEECCCTTTH---HHHHHHHH--CSSCEEEECSSHHHHHHHHHHHHHHHCCCEEEEECSSHHHH
T ss_pred HHHHHHHHHHHcCCCEEEECCCCccH---HHHHHHHh--CCCceEEEecCcHHHHHHHHHHHHhhCCCEEEEECCchhhh
Confidence 34557777777777776655433211 12122211 1233333211 12221 1123345599999955
Q ss_pred ----hHHHHHHcCCceeecc
Q 045998 307 ----STLETVAAGVPVIAYP 322 (408)
Q Consensus 307 ----s~~eal~~GvP~i~~P 322 (408)
.+.||-+.++|+|++-
T Consensus 88 N~~~gia~A~~d~vPll~it 107 (578)
T 3lq1_A 88 NYFPAVAEANLSQIPLIVLT 107 (578)
T ss_dssp TTHHHHHHHHHTTCCEEEEE
T ss_pred hhhHHHHHHHhcCCCeEEEe
Confidence 7899999999999974
No 127
>4dik_A Flavoprotein; TM0755, electron transport, DI-iron protein; 1.75A {Thermotoga maritima} PDB: 4dil_A 1vme_A*
Probab=21.57 E-value=91 Score=29.72 Aligned_cols=47 Identities=9% Similarity=0.060 Sum_probs=35.8
Q ss_pred hhhhhhhccCCCCceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEE
Q 045998 208 IEIHQWLNKKPPSSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLW 254 (408)
Q Consensus 208 ~~l~~~l~~~~~~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw 254 (408)
+...+|-...+...-|.|-++|+...++...++++++|.+.|..++.
T Consensus 253 ~~Y~~w~~~~~~~~~v~I~Y~S~yGnTe~mA~~ia~gl~~~Gv~~~~ 299 (410)
T 4dik_A 253 NHYVSVAKGDPKKGKVTVIYDSMYGFVENVMKKAIDSLKEKGFTPVV 299 (410)
T ss_dssp HHHHHHHHTCCCTTEEEEEEECSSSHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHhhcccccccceeeEEecccChHHHHHHHHHHHHHhcCCceEE
Confidence 33457776554444577778999988888899999999999987654
No 128
>3cu5_A Two component transcriptional regulator, ARAC FAM; structural genomics, protein structure initiative; 2.60A {Clostridium phytofermentans isdg}
Probab=21.30 E-value=1.2e+02 Score=22.97 Aligned_cols=39 Identities=10% Similarity=0.051 Sum_probs=24.0
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEe
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLW 89 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~ 89 (408)
.+.++.+.. .+||+||.|..++ .+..+++.+ ++|.+.++
T Consensus 39 ~~al~~~~~--~~~dlvllD~~lp~~~g~~l~~~l~~~~~~~~ii~ls 84 (141)
T 3cu5_A 39 INAIQIALK--HPPNVLLTDVRMPRMDGIELVDNILKLYPDCSVIFMS 84 (141)
T ss_dssp HHHHHHHTT--SCCSEEEEESCCSSSCHHHHHHHHHHHCTTCEEEEEC
T ss_pred HHHHHHHhc--CCCCEEEEeCCCCCCCHHHHHHHHHhhCCCCcEEEEe
Confidence 344444443 4799999998764 456655543 46666653
No 129
>3b2n_A Uncharacterized protein Q99UF4; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Staphylococcus aureus}
Probab=21.27 E-value=1e+02 Score=23.05 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=25.2
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 91 (408)
.+.++.+.+ .+||+||.|..++ -+..+.+.+ ++|.+.++..
T Consensus 39 ~~al~~~~~--~~~dlvilD~~lp~~~g~~~~~~l~~~~~~~~ii~ls~~ 86 (133)
T 3b2n_A 39 LDAMKLIEE--YNPNVVILDIEMPGMTGLEVLAEIRKKHLNIKVIIVTTF 86 (133)
T ss_dssp HHHHHHHHH--HCCSEEEECSSCSSSCHHHHHHHHHHTTCSCEEEEEESC
T ss_pred HHHHHHHhh--cCCCEEEEecCCCCCCHHHHHHHHHHHCCCCcEEEEecC
Confidence 344444433 3689999998774 455555443 4777776543
No 130
>1ozh_A ALS, acetolactate synthase, catabolic; acetohydroxyacid synthase, thiamin diphosphate, lyase; HET: PGE HE3; 2.00A {Klebsiella pneumoniae} SCOP: c.31.1.3 c.36.1.5 c.36.1.9 PDB: 1ozg_A* 1ozf_A*
Probab=21.21 E-value=1.4e+02 Score=29.51 Aligned_cols=28 Identities=21% Similarity=0.243 Sum_probs=23.4
Q ss_pred CcceEEeccCc------chHHHHHHcCCceeecc
Q 045998 295 AVSCFLTHCGW------NSTLETVAAGVPVIAYP 322 (408)
Q Consensus 295 ~v~~fitHgG~------~s~~eal~~GvP~i~~P 322 (408)
+.+++++|.|- +.+.||-+.++|+|++-
T Consensus 73 ~p~v~~~TsGpG~~N~~~~l~~A~~~~vPll~it 106 (566)
T 1ozh_A 73 KAGVALVTSGPGCSNLITGMATANSEGDPVVALG 106 (566)
T ss_dssp SCEEEEECSTHHHHTTHHHHHHHHHHTCCEEEEE
T ss_pred CCEEEEEccChHHHHHHHHHHHHHhcCCCEEEEe
Confidence 34559999995 78899999999999973
No 131
>3gi1_A LBP, laminin-binding protein of group A streptococci; zinc-binding receptor, metal-binding, helical backbone, alpha/beta domains; 2.45A {Streptococcus pyogenes} PDB: 3hjt_A
Probab=21.15 E-value=1.8e+02 Score=25.96 Aligned_cols=41 Identities=12% Similarity=0.122 Sum_probs=31.6
Q ss_pred HHHHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHcCCCeEEE
Q 045998 46 KNLSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEHKIPCAVL 88 (408)
Q Consensus 46 ~~l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~lgIP~v~~ 88 (408)
..+.++++.+++ .+..||+++..+. .+..+|+..|++.+.+
T Consensus 215 ~~l~~l~~~ik~--~~v~~if~e~~~~~~~~~~la~~~g~~v~~l 257 (286)
T 3gi1_A 215 RQLKEIQDFVKE--YNVKTIFAEDNVNPKIAHAIAKSTGAKVKTL 257 (286)
T ss_dssp HHHHHHHHHHHH--TTCCEEEECTTSCTHHHHHHHHTTTCEEEEC
T ss_pred HHHHHHHHHHHH--cCCCEEEEeCCCChHHHHHHHHHhCCeEEEe
Confidence 356666777765 5789999998774 5678899999998765
No 132
>2pl1_A Transcriptional regulatory protein PHOP; CHEY-like fold, response regulator, beryllium fluoride, transcription factor, activated, virulence; 1.90A {Escherichia coli} SCOP: c.23.1.1 PDB: 2pkx_A
Probab=21.07 E-value=1.6e+02 Score=21.11 Aligned_cols=41 Identities=15% Similarity=0.058 Sum_probs=25.2
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 91 (408)
++.++.+.. .+||++|.|..++ -+..+.+.+ .+|.+.++..
T Consensus 34 ~~a~~~~~~--~~~dlil~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~~ 81 (121)
T 2pl1_A 34 KEADYYLNE--HIPDIAIVDLGLPDEDGLSLIRRWRSNDVSLPILVLTAR 81 (121)
T ss_dssp HHHHHHHHH--SCCSEEEECSCCSSSCHHHHHHHHHHTTCCSCEEEEESC
T ss_pred HHHHHHHhc--cCCCEEEEecCCCCCCHHHHHHHHHhcCCCCCEEEEecC
Confidence 344444443 4789999998764 455555432 4777777543
No 133
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=21.07 E-value=70 Score=27.75 Aligned_cols=41 Identities=15% Similarity=0.286 Sum_probs=32.5
Q ss_pred hHHHHHHHHHhhcCCCCccEEEECCCCCcHHHHHHHcCCCeEEEec
Q 045998 45 SKNLSSIINNLSNNDKKKSCIITNPFMPWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 45 ~~~l~~ll~~l~~~~~~~D~vI~D~~~~~~~~vA~~lgIP~v~~~~ 90 (408)
...+++.++++++ .++|+||-| ..+..+|+++|+|.+.+.+
T Consensus 140 ~ee~~~~i~~l~~--~G~~vVVG~---~~~~~~A~~~Gl~~vlI~s 180 (225)
T 2pju_A 140 EEDARGQINELKA--NGTEAVVGA---GLITDLAEEAGMTGIFIYS 180 (225)
T ss_dssp HHHHHHHHHHHHH--TTCCEEEES---HHHHHHHHHTTSEEEESSC
T ss_pred HHHHHHHHHHHHH--CCCCEEECC---HHHHHHHHHcCCcEEEECC
Confidence 3466778888877 579999976 3458899999999998874
No 134
>3ip0_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase; alpha beta, ATP-binding, folate biosynthesis, nucleotide-binding; HET: APC HHR HHS; 0.89A {Escherichia coli} PDB: 1eq0_A 1dy3_A* 1ex8_A* 1hka_A 1eqm_A* 1rao_A* 1rb0_A* 2f63_A 2f65_A 1q0n_A* 3ud5_A* 3ude_A* 3udv_A* 4f7v_A* 3kue_A 3hd2_A* 1f9h_A* 1g4c_A 1kbr_A 1hq2_A* ...
Probab=21.05 E-value=90 Score=25.47 Aligned_cols=28 Identities=32% Similarity=0.401 Sum_probs=22.5
Q ss_pred eEEEecCCcccCCHHHHHHHHHHHHhCC
Q 045998 222 VIYISFGSLLVLSQNQIDSIAAALINTK 249 (408)
Q Consensus 222 vvyvs~GS~~~~~~~~~~~~~~al~~~~ 249 (408)
+.|+++||....+.+.++..+..|.+..
T Consensus 2 iAyi~lGSNlGd~~~~l~~A~~~L~~~~ 29 (158)
T 3ip0_A 2 VAYIAIGSNLASPLEQVNAALKALGDIP 29 (158)
T ss_dssp EEEEEEEECSSCHHHHHHHHHHHHHTST
T ss_pred EEEEEEecchhhHHHHHHHHHHHHHcCC
Confidence 6899999998666677888888888753
No 135
>3tla_A MCCF; serine protease, hydrolase; 1.20A {Escherichia coli} PDB: 3tle_A* 3tlg_A 3tlb_A* 3tlc_A* 3tlz_A* 3tly_A
Probab=21.03 E-value=82 Score=29.65 Aligned_cols=27 Identities=4% Similarity=0.054 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHhCCCCEEEEEecCC
Q 045998 234 SQNQIDSIAAALINTKRPFLWVIRSQE 260 (408)
Q Consensus 234 ~~~~~~~~~~al~~~~~~~iw~~~~~~ 260 (408)
+.+.++.+.+++.+...+.||.++.+.
T Consensus 94 d~~Ra~dL~~af~Dp~i~aI~~~rGGy 120 (371)
T 3tla_A 94 IKERAQEFNELVYNPDITCIMSTIGGD 120 (371)
T ss_dssp HHHHHHHHHHHHTCTTEEEEEESCCCS
T ss_pred HHHHHHHHHHHhhCCCCCEEEEccccc
Confidence 557788899999999999999887653
No 136
>3pp8_A Glyoxylate/hydroxypyruvate reductase A; structural genomics, center for structural genomics of infec diseases, csgid; 2.10A {Salmonella enterica subsp} PDB: 3kbo_A
Probab=21.03 E-value=4.5e+02 Score=23.72 Aligned_cols=64 Identities=20% Similarity=0.097 Sum_probs=39.3
Q ss_pred CceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceE
Q 045998 220 SSVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCF 299 (408)
Q Consensus 220 ~~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~f 299 (408)
+.+-+|.+|.+. ..++..+...|.+++..-+.... . +++ ..........++|+.+++ +
T Consensus 140 ~tvGIiG~G~IG-------~~vA~~l~~~G~~V~~~dr~~~~-----~-~~~-------~~~~~~~~l~ell~~aDi--V 197 (315)
T 3pp8_A 140 FSVGIMGAGVLG-------AKVAESLQAWGFPLRCWSRSRKS-----W-PGV-------ESYVGREELRAFLNQTRV--L 197 (315)
T ss_dssp CCEEEECCSHHH-------HHHHHHHHTTTCCEEEEESSCCC-----C-TTC-------EEEESHHHHHHHHHTCSE--E
T ss_pred CEEEEEeeCHHH-------HHHHHHHHHCCCEEEEEcCCchh-----h-hhh-------hhhcccCCHHHHHhhCCE--E
Confidence 458999999988 57788888889987643222111 1 111 111222345677888888 7
Q ss_pred EeccCc
Q 045998 300 LTHCGW 305 (408)
Q Consensus 300 itHgG~ 305 (408)
+.|+-.
T Consensus 198 ~l~~Pl 203 (315)
T 3pp8_A 198 INLLPN 203 (315)
T ss_dssp EECCCC
T ss_pred EEecCC
Confidence 777643
No 137
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=20.95 E-value=1.7e+02 Score=21.53 Aligned_cols=42 Identities=21% Similarity=0.246 Sum_probs=25.7
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-------CCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-------KIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~~ 91 (408)
.+.++.+... .++|+||.|..++ -+..+++.+ .+|.+.++..
T Consensus 40 ~~a~~~~~~~-~~~dlvi~D~~~p~~~g~~~~~~lr~~~~~~~~pii~~s~~ 90 (129)
T 3h1g_A 40 VEAWEKLDAN-ADTKVLITDWNMPEMNGLDLVKKVRSDSRFKEIPIIMITAE 90 (129)
T ss_dssp HHHHHHHHHC-TTCCEEEECSCCSSSCHHHHHHHHHTSTTCTTCCEEEEESC
T ss_pred HHHHHHHHhC-CCCCEEEEeCCCCCCCHHHHHHHHHhcCCCCCCeEEEEeCC
Confidence 3344444331 3689999998774 456666543 4677776543
No 138
>2vqe_B 30S ribosomal protein S2; tRNA-binding, rRNA-binding, metal-binding, zinc-finger, translation; HET: TM2 PAR; 2.5A {Thermus thermophilus} SCOP: c.23.15.1 PDB: 1gix_E* 1hnw_B* 1hnx_B* 1hnz_B* 1hr0_B 1ibk_B* 1ibl_B* 1ibm_B 1j5e_B 1jgo_E* 1jgp_E* 1jgq_E* 1ml5_E* 1n32_B* 1n33_B* 1n34_B 1n36_B 1xmo_B* 1xmq_B* 1xnq_B* ...
Probab=20.75 E-value=78 Score=28.10 Aligned_cols=31 Identities=19% Similarity=0.132 Sum_probs=23.9
Q ss_pred CCccEEE-ECCCC-CcHHHHHHHcCCCeEEEec
Q 045998 60 KKKSCII-TNPFM-PWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 60 ~~~D~vI-~D~~~-~~~~~vA~~lgIP~v~~~~ 90 (408)
..||+|| +|+.. ..+..=|.++|||+|.+.-
T Consensus 157 ~~Pdll~V~Dp~~e~~Ai~EA~~l~IPvIaivD 189 (256)
T 2vqe_B 157 RLPDAIFVVDPTKEAIAVREARKLFIPVIALAD 189 (256)
T ss_dssp SCCSEEEESCTTTTHHHHHHHHHTTCCCEECCC
T ss_pred cCCCEEEEeCCccchHHHHHHHHcCCCEEEEec
Confidence 4689776 58765 4677789999999999853
No 139
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=20.65 E-value=1.7e+02 Score=22.06 Aligned_cols=41 Identities=17% Similarity=0.127 Sum_probs=26.1
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHH-------cCCCeEEEec
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAE-------HKIPCAVLWI 90 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~-------lgIP~v~~~~ 90 (408)
.++.++.+.. .+||+||.|..++ .+..+.+. -++|.++++.
T Consensus 40 ~~~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~lr~~~~~~~~pii~~s~ 89 (144)
T 3kht_A 40 GAKALYQVQQ--AKYDLIILDIGLPIANGFEVMSAVRKPGANQHTPIVILTD 89 (144)
T ss_dssp HHHHHHHHTT--CCCSEEEECTTCGGGCHHHHHHHHHSSSTTTTCCEEEEET
T ss_pred HHHHHHHhhc--CCCCEEEEeCCCCCCCHHHHHHHHHhcccccCCCEEEEeC
Confidence 4555666654 5799999998764 34555443 2477777654
No 140
>3lp6_A Phosphoribosylaminoimidazole carboxylase catalyti; alpha and beta protein, structural genomics, PSI-2, protein initiative; 1.70A {Mycobacterium tuberculosis} SCOP: c.23.8.0
Probab=20.62 E-value=3.6e+02 Score=22.24 Aligned_cols=142 Identities=15% Similarity=0.136 Sum_probs=75.8
Q ss_pred ceEEEecCCcccCCHHHHHHHHHHHHhCCCCEEEEEecCCcccccccchhhhhhcCCCeEEEecccHHHHhcccCcceEE
Q 045998 221 SVIYISFGSLLVLSQNQIDSIAAALINTKRPFLWVIRSQENKEGGVLRAGFLEETKDRGLVVKWCSQEKVLMHAAVSCFL 300 (408)
Q Consensus 221 ~vvyvs~GS~~~~~~~~~~~~~~al~~~~~~~iw~~~~~~~~~~~~lp~~~~~~~~~n~~v~~w~pq~~lL~h~~v~~fi 300 (408)
+.|-|-+||.. +....++....|+..|.++=..+-... .+|+.+.+ ++- ..--...++ ||
T Consensus 8 ~~V~IimgS~S--D~~v~~~a~~~L~~~gi~~ev~V~SaH-----R~p~~~~~----------~~~-~a~~~g~~V--iI 67 (174)
T 3lp6_A 8 PRVGVIMGSDS--DWPVMADAAAALAEFDIPAEVRVVSAH-----RTPEAMFS----------YAR-GAAARGLEV--II 67 (174)
T ss_dssp CSEEEEESCGG--GHHHHHHHHHHHHHTTCCEEEEECCTT-----TCHHHHHH----------HHH-HHHHHTCCE--EE
T ss_pred CeEEEEECcHH--hHHHHHHHHHHHHHcCCCEEEEEECCC-----CCHHHHHH----------HHH-HHHhCCCCE--EE
Confidence 44667778876 567788889999999988655444433 23433221 100 000123444 88
Q ss_pred eccCcc----hHHHHHHcCCceeeccCCCChh--hhH-Hhhhc-eeeeEEEe-ecCCCCCcCHHHHHHHHHHHhcCCcHH
Q 045998 301 THCGWN----STLETVAAGVPVIAYPEWTDQP--TDA-KLLVD-VFKIGVRM-RNEEDGTLSIQQVQRCIDEATQGLNAT 371 (408)
Q Consensus 301 tHgG~~----s~~eal~~GvP~i~~P~~~DQ~--~na-~~v~~-~~g~G~~l-~~~~~~~~~~~~l~~~i~~vl~~~~~~ 371 (408)
.=.|.. ++.-++ .-.|+|++|...-.. ..+ .-+.. .-|+.+.. .. ++..+.--+...|-. +.| +
T Consensus 68 a~AG~aa~LpgvvA~~-t~~PVIgVP~~~~~l~G~daLlS~vqmp~GvpVatV~I--~~~~nAa~lAa~Il~-~~d---~ 140 (174)
T 3lp6_A 68 AGAGGAAHLPGMVAAA-TPLPVIGVPVPLGRLDGLDSLLSIVQMPAGVPVATVSI--GGAGNAGLLAVRMLG-AAN---P 140 (174)
T ss_dssp EEEESSCCHHHHHHHH-CSSCEEEEEECCSSGGGHHHHHHHHCCCTTCCCEECCT--TCHHHHHHHHHHHHH-TTC---H
T ss_pred EecCchhhhHHHHHhc-cCCCEEEeeCCCCCCCCHHHHHHHhhCCCCCeeEEEEc--CcchHHHHHHHHHHh-CCC---H
Confidence 877754 444443 569999999864321 111 11111 13432222 22 122333333333321 234 7
Q ss_pred HHHHHHHHHHHHHHHHHh
Q 045998 372 QMKKRAVAWKEAAKKALE 389 (408)
Q Consensus 372 ~~~~~a~~l~~~~~~a~~ 389 (408)
.++++.+..++..++.+.
T Consensus 141 ~l~~kl~~~r~~~~~~v~ 158 (174)
T 3lp6_A 141 QLRARIVAFQDRLADVVA 158 (174)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 899998888888877653
No 141
>3n0r_A Response regulator; sigma factor, receiver, two-component SI transduction, signaling protein; HET: MSE GOL; 1.25A {Caulobacter vibrioides} PDB: 3t0y_A
Probab=20.57 E-value=61 Score=29.01 Aligned_cols=41 Identities=5% Similarity=0.145 Sum_probs=26.1
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC---cHHHHHHH----cCCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP---WVPDVAAE----HKIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~---~~~~vA~~----lgIP~v~~~~~ 91 (408)
.+.++.+.+ .+||+||.|..++ -|..+++. .++|.|.++..
T Consensus 195 ~eAl~~~~~--~~~dlvl~D~~MPd~mdG~e~~~~ir~~~~~piI~lT~~ 242 (286)
T 3n0r_A 195 GEALEAVTR--RTPGLVLADIQLADGSSGIDAVKDILGRMDVPVIFITAF 242 (286)
T ss_dssp HHHHHHHHH--CCCSEEEEESCCTTSCCTTTTTHHHHHHTTCCEEEEESC
T ss_pred HHHHHHHHh--CCCCEEEEcCCCCCCCCHHHHHHHHHhcCCCCEEEEeCC
Confidence 344455544 5799999999887 23333332 27998887553
No 142
>3goc_A Endonuclease V; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: YES; 1.60A {Streptomyces avermitilis}
Probab=20.50 E-value=1.4e+02 Score=26.20 Aligned_cols=39 Identities=8% Similarity=0.153 Sum_probs=25.9
Q ss_pred HHHHHHHHhhcCCCCccEEEECCCC-------CcHHHHHHHcCCCeEEE
Q 045998 47 NLSSIINNLSNNDKKKSCIITNPFM-------PWVPDVAAEHKIPCAVL 88 (408)
Q Consensus 47 ~l~~ll~~l~~~~~~~D~vI~D~~~-------~~~~~vA~~lgIP~v~~ 88 (408)
.+-++++++. .+||++++|..- .-+..+.-.+++|+|.+
T Consensus 96 ~ll~al~~L~---~~PdlllvDG~GiaHPRr~GlAsHlGv~l~~PtIGV 141 (237)
T 3goc_A 96 TVLAALDALP---CPPGLIVCDGYGVAHPRRFGLASHLGVLTGLPTIGV 141 (237)
T ss_dssp HHHHHHHTSS---SCCSEEEEESCSSCSTTSCCHHHHHHHHHCSCEEEE
T ss_pred HHHHHHHhcC---CCCCEEEEeCceeecCCCcchhheeeeecCCCEEee
Confidence 4444555554 479999999864 23445555678898886
No 143
>2qxy_A Response regulator; regulation of transcription, NYSGXRC, protein structure initiative II (PSI II), structural genomics; 1.95A {Thermotoga maritima}
Probab=20.48 E-value=1.2e+02 Score=22.93 Aligned_cols=41 Identities=12% Similarity=0.024 Sum_probs=25.2
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEecc
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWIQ 91 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 91 (408)
..+.++.+.. .+||+||.|. ++ .+..+.+.+ ++|.++++..
T Consensus 37 ~~~a~~~l~~--~~~dlvi~d~-~~~~~g~~~~~~l~~~~~~~pii~ls~~ 84 (142)
T 2qxy_A 37 EQEAFTFLRR--EKIDLVFVDV-FEGEESLNLIRRIREEFPDTKVAVLSAY 84 (142)
T ss_dssp HHHHHHHHTT--SCCSEEEEEC-TTTHHHHHHHHHHHHHCTTCEEEEEESC
T ss_pred HHHHHHHHhc--cCCCEEEEeC-CCCCcHHHHHHHHHHHCCCCCEEEEECC
Confidence 3455555544 5799999998 64 334444332 5787777543
No 144
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=20.47 E-value=88 Score=26.81 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=23.2
Q ss_pred CccEEE-ECCCC-CcHHHHHHHcCCCeEEEec
Q 045998 61 KKSCII-TNPFM-PWVPDVAAEHKIPCAVLWI 90 (408)
Q Consensus 61 ~~D~vI-~D~~~-~~~~~vA~~lgIP~v~~~~ 90 (408)
.||+|| .|+.. ..+..=|.++|||.|.+.-
T Consensus 115 ~PdlliV~Dp~~e~~ai~EA~~l~IPvIalvD 146 (208)
T 1vi6_A 115 EPEVVFVNDPAIDKQAVSEATAVGIPVVALCD 146 (208)
T ss_dssp CCSEEEESCTTTTHHHHHHHHHTTCCEEEEEC
T ss_pred CCCEEEEECCCcchhHHHHHHHhCCCEEEEeC
Confidence 588776 58765 4677779999999999853
No 145
>2q37_A OHCU decarboxylase; 2-OXO-4-hydroxy-4-carboxy-5-ureidoimidazoline, plant protein, lyase; HET: 3AL; 2.50A {Arabidopsis thaliana} SCOP: a.288.1.1
Probab=20.47 E-value=1.2e+02 Score=25.28 Aligned_cols=55 Identities=5% Similarity=-0.012 Sum_probs=42.2
Q ss_pred hhhHHhhhceeeeEEEeecCCCCCcCHHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHH
Q 045998 328 PTDAKLLVDVFKIGVRMRNEEDGTLSIQQVQRCIDEATQGLNATQMKKRAVAWKEAAKK 386 (408)
Q Consensus 328 ~~na~~v~~~~g~G~~l~~~~~~~~~~~~l~~~i~~vl~~~~~~~~~~~a~~l~~~~~~ 386 (408)
..|+.+-++ +|.-..+.. ...++++|-+++++=|.|....+.+..+.++.+..+-
T Consensus 118 ~LN~~Ye~k-FGfpFVi~v---~G~s~~~IL~~l~~RL~N~~~~E~~~Al~Ev~kIa~~ 172 (181)
T 2q37_A 118 EWNVLYKKK-FGFIFIICA---SGRTHAEMLHALKERYENRPIVELEIAAMEQMKITEL 172 (181)
T ss_dssp HHHHHHHHH-HSSCCCCCC---SSCCHHHHHHHHHHHTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHH-cCCeEEEEe---CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Confidence 458888888 888877776 6778899999999888876555677777777766554
No 146
>4ds3_A Phosphoribosylglycinamide formyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.85A {Brucella melitensis BV}
Probab=20.43 E-value=1.1e+02 Score=26.27 Aligned_cols=41 Identities=10% Similarity=0.068 Sum_probs=0.0
Q ss_pred HHHHHHHhhcCC--CCccEEEECCCCCcHHHHHHHcCCCeEEE
Q 045998 48 LSSIINNLSNND--KKKSCIITNPFMPWVPDVAAEHKIPCAVL 88 (408)
Q Consensus 48 l~~ll~~l~~~~--~~~D~vI~D~~~~~~~~vA~~lgIP~v~~ 88 (408)
++++++.+.+.. -..-+||+|.-...+...|+++|||+..+
T Consensus 21 l~all~~~~~~~l~~~I~~Visn~~~a~~l~~A~~~gIp~~~~ 63 (209)
T 4ds3_A 21 MEALIRAAQAPGFPAEIVAVFSDKAEAGGLAKAEAAGIATQVF 63 (209)
T ss_dssp HHHHHHHHTSTTCSEEEEEEEESCTTCTHHHHHHHTTCCEEEC
T ss_pred HHHHHHHHHcCCCCcEEEEEEECCcccHHHHHHHHcCCCEEEe
No 147
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=20.41 E-value=1.6e+02 Score=21.46 Aligned_cols=40 Identities=15% Similarity=0.149 Sum_probs=25.4
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-------CCCeEEEec
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-------KIPCAVLWI 90 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-------gIP~v~~~~ 90 (408)
.+.++.+.. .+||+||.|..++ -+..+++.+ .+|.+.++.
T Consensus 39 ~~a~~~~~~--~~~dlvi~D~~l~~~~g~~l~~~l~~~~~~~~~~ii~~s~ 87 (128)
T 1jbe_A 39 VDALNKLQA--GGYGFVISDWNMPNMDGLELLKTIRAXXAMSALPVLMVTA 87 (128)
T ss_dssp HHHHHHHTT--CCCCEEEEESCCSSSCHHHHHHHHHC--CCTTCCEEEEES
T ss_pred HHHHHHHHh--cCCCEEEEeCCCCCCCHHHHHHHHHhhcccCCCcEEEEec
Confidence 445555543 4799999998774 456665543 366666654
No 148
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=20.14 E-value=1.2e+02 Score=23.44 Aligned_cols=41 Identities=15% Similarity=0.173 Sum_probs=25.8
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEec
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWI 90 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~ 90 (408)
..+.++.+.+ .+||+||.|..++ .+..+.+.+ ++|.++++.
T Consensus 47 ~~~a~~~l~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~~ii~~s~ 94 (153)
T 3hv2_A 47 ATQALQLLAS--REVDLVISAAHLPQMDGPTLLARIHQQYPSTTRILLTG 94 (153)
T ss_dssp HHHHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHHHCTTSEEEEECC
T ss_pred HHHHHHHHHc--CCCCEEEEeCCCCcCcHHHHHHHHHhHCCCCeEEEEEC
Confidence 3445555544 4799999998764 455555432 577776644
No 149
>1xhf_A DYE resistance, aerobic respiration control protein ARCA; two-component system, gene regulation, transcription factor, anoxic redox control; 2.15A {Escherichia coli} SCOP: c.23.1.1 PDB: 1xhe_A
Probab=20.13 E-value=1.5e+02 Score=21.44 Aligned_cols=41 Identities=17% Similarity=0.063 Sum_probs=25.1
Q ss_pred HHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc----CCCeEEEecc
Q 045998 49 SSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH----KIPCAVLWIQ 91 (408)
Q Consensus 49 ~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l----gIP~v~~~~~ 91 (408)
.+.++.+.. .+||+||.|..++ -+..+++.+ ++|.+.++..
T Consensus 37 ~~a~~~~~~--~~~dlvi~D~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 83 (123)
T 1xhf_A 37 AEMHQILSE--YDINLVIMDINLPGKNGLLLARELREQANVALMFLTGR 83 (123)
T ss_dssp HHHHHHHHH--SCCSEEEECSSCSSSCHHHHHHHHHHHCCCEEEEEESC
T ss_pred HHHHHHHhc--CCCCEEEEcCCCCCCCHHHHHHHHHhCCCCcEEEEECC
Confidence 334444433 4789999998764 455555543 5777766543
No 150
>3cz5_A Two-component response regulator, LUXR family; structural genomics, protein structure initiative; 2.70A {Aurantimonas SP}
Probab=20.07 E-value=1.9e+02 Score=22.01 Aligned_cols=42 Identities=2% Similarity=0.007 Sum_probs=26.2
Q ss_pred HHHHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc-----CCCeEEEecc
Q 045998 48 LSSIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH-----KIPCAVLWIQ 91 (408)
Q Consensus 48 l~~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l-----gIP~v~~~~~ 91 (408)
..+.++.+.+ .+||+||.|..+. .+..+++.+ ++|.++++..
T Consensus 40 ~~~a~~~l~~--~~~dlii~D~~l~~~~g~~~~~~l~~~~~~~~ii~ls~~ 88 (153)
T 3cz5_A 40 AGEAYRLYRE--TTPDIVVMDLTLPGPGGIEATRHIRQWDGAARILIFTMH 88 (153)
T ss_dssp HHHHHHHHHT--TCCSEEEECSCCSSSCHHHHHHHHHHHCTTCCEEEEESC
T ss_pred HHHHHHHHhc--CCCCEEEEecCCCCCCHHHHHHHHHHhCCCCeEEEEECC
Confidence 3445555544 4699999998764 455554432 5788777544
No 151
>1zgz_A Torcad operon transcriptional regulatory protein; two-component system, gene regulation, transcription factor, respiratory system; 1.80A {Escherichia coli} SCOP: c.23.1.1
Probab=20.03 E-value=1.4e+02 Score=21.70 Aligned_cols=40 Identities=8% Similarity=0.015 Sum_probs=24.6
Q ss_pred HHHHHhhcCCCCccEEEECCCCC--cHHHHHHHc----CCCeEEEecc
Q 045998 50 SIINNLSNNDKKKSCIITNPFMP--WVPDVAAEH----KIPCAVLWIQ 91 (408)
Q Consensus 50 ~ll~~l~~~~~~~D~vI~D~~~~--~~~~vA~~l----gIP~v~~~~~ 91 (408)
+.++.+.. .+||+||.|..++ -+..+++.+ .+|.+.++..
T Consensus 37 ~~~~~~~~--~~~dlvi~d~~l~~~~g~~~~~~l~~~~~~~ii~~s~~ 82 (122)
T 1zgz_A 37 GLREIMQN--QSVDLILLDINLPDENGLMLTRALRERSTVGIILVTGR 82 (122)
T ss_dssp HHHHHHHH--SCCSEEEEESCCSSSCHHHHHHHHHTTCCCEEEEEESS
T ss_pred HHHHHHhc--CCCCEEEEeCCCCCCChHHHHHHHHhcCCCCEEEEECC
Confidence 34444433 4689999998764 456666544 4677666543
Done!