Query 045999
Match_columns 438
No_of_seqs 231 out of 430
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 13:14:00 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/045999.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/045999hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p6w_A VP54, putative glycosyl 100.0 7.8E-41 2.7E-45 310.7 6.5 135 123-266 4-150 (213)
2 1ll2_A Glycogenin-1; protein-s 96.0 0.052 1.8E-06 54.0 12.2 81 192-303 91-172 (333)
3 3u2u_A Glycogenin-1, GN-1, GN1 95.6 0.046 1.6E-06 52.9 9.3 92 176-303 81-173 (263)
4 3tzt_A Glycosyl transferase fa 92.6 0.35 1.2E-05 46.5 8.5 56 155-210 54-115 (276)
5 1g9r_A Glycosyl transferase; a 92.6 0.13 4.6E-06 49.9 5.6 123 158-303 52-197 (311)
6 2fy7_A Beta-1,4-galactosyltran 61.2 56 0.0019 31.3 10.7 77 123-211 63-145 (287)
7 2c0n_A A197; thermophil protei 40.3 55 0.0019 30.7 6.5 49 153-210 16-68 (203)
8 2nxv_A ATP synthase subunits r 38.2 52 0.0018 30.1 6.1 75 124-212 15-90 (249)
9 3ckj_A Putative uncharacterize 24.7 1.4E+02 0.0047 28.4 6.8 81 123-211 46-147 (329)
10 2ffu_A Ppgalnact-2, polypeptid 23.2 1.8E+02 0.0061 29.3 7.6 80 123-209 64-160 (501)
11 2lju_A Putative oxidoreductase 21.2 46 0.0016 28.2 2.2 19 151-169 69-87 (108)
12 2d7i_A Polypeptide N-acetylgal 20.7 2E+02 0.007 29.7 7.6 80 123-209 110-210 (570)
No 1
>2p6w_A VP54, putative glycosyltransferase (mannosyltransferase in glycosylating the PBCV-1 major...; HET: FLC; 1.60A {Paramecium bursaria chlorella virus 1} PDB: 2p72_A* 2p73_A*
Probab=100.00 E-value=7.8e-41 Score=310.69 Aligned_cols=135 Identities=21% Similarity=0.466 Sum_probs=122.9
Q ss_pred CCCcEEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHhCCcEEEeccccCCC--CCCccchHHHHHHHHHhCCCCcEEE
Q 045999 123 ARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVLLNPK--MNSFWAKLPVVKAAMLAHPEAEWIW 200 (438)
Q Consensus 123 ~~prIvIVT~s~p~~~~~~~gd~~l~~ai~Nk~~YAr~HGY~l~~~~~~~~~~--~~~~W~Kv~~LR~aM~~~P~aEWvw 200 (438)
.+|||+||||++|++| ++++++++||++||++|||+++++++.+.+. +...|.|.++||++|.+||++||||
T Consensus 4 ~~p~IllvtGs~p~ew------~yl~ksiKNK~DYArrHGYelfy~d~~l~k~~e~a~eW~ksW~IR~AM~khPeAEWfW 77 (213)
T 2p6w_A 4 TTPCITILSGHFPKET------IYARKTKELVEEYCSIHGYNFYYEESEPLETEEHALHFRRSWIIQQAAEKFPSTEWFL 77 (213)
T ss_dssp --CCEEEEEECSCTTC------HHHHHHHHHHHHHHHHHTCEEEEECSCCSCCSHHHHHHTHHHHHHHHHHHCTTCSEEE
T ss_pred CCceEEEEeCCCCCCc------HHHHHHHHHHHHHHHHcCCeEEEeecccccchhhcccchhhHHHHHHHHHCCCceEEE
Confidence 4799999999999986 8999999999999999999999998776554 5667999999999999999999999
Q ss_pred EEcCCeeeecCCCCCCcccc---CCCCccccCCCcccccCCCCCcccceeeE-------EeCCHhHHHHHHHHHhh
Q 045999 201 WVDSDAAFTDMEFKLPLERY---RNHNVVVHGWPKLIYEAKSWTSLNAGVFL-------IRNCQWSMDFMDTWANM 266 (438)
Q Consensus 201 WLDaDAlImn~~~~Lple~~---~d~nlvi~~~~~lv~~tqD~~GLNtGsFL-------IRNs~WS~~fLd~W~~m 266 (438)
|||+||+||||++++|++.+ +++|+++|||.++++.+ .|||||||| |||||||++|||+|+.|
T Consensus 78 WLDsDAlIMDmnf~lPLe~yldl~~~NlvvHGw~e~~~~~---~~lNtGvfL~~~~~~~irncqWSld~~~~w~~~ 150 (213)
T 2p6w_A 78 WLDSDVYVNPKNKNKPITSFIDLSDPNILYHTFHEAPWGS---YPINTGVKFVHKDALEIEKIVWSLRNEAPWNTF 150 (213)
T ss_dssp EECTTEEECGGGTTSCGGGTCCCCCTTCCEEEECCTTTSS---SSCCTTEEEEEGGGHHHHHHHHHTTTSTTTTST
T ss_pred EecCCceeecCCCCCcHHHccccccCceeecccccccccc---ccccceeeeecccchhhhhceeehhhhhcccCC
Confidence 99999999999999999999 89999999998876622 499999999 99999999999999975
No 2
>1ll2_A Glycogenin-1; protein-substrate complex, beta-alpha-beta rossman-like NUCL binding fold, DXD motif, non-proline CIS peptide bond, TRAN; HET: UPG; 1.90A {Oryctolagus cuniculus} SCOP: c.68.1.14 PDB: 1ll3_A 1ll0_A 1zcv_A 1zcu_A 1zdf_A* 1zcy_A 1zdg_A*
Probab=96.02 E-value=0.052 Score=53.96 Aligned_cols=81 Identities=14% Similarity=0.255 Sum_probs=46.6
Q ss_pred hCCCCcEEEEEcCCeeeecCCCCCCccccCCCCccccCCCcccccCCCC-CcccceeeEEeCCHhHHHHHHHHHhhCCCC
Q 045999 192 AHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEAKSW-TSLNAGVFLIRNCQWSMDFMDTWANMGPIG 270 (438)
Q Consensus 192 ~~P~aEWvwWLDaDAlImn~~~~Lple~~~d~nlvi~~~~~lv~~tqD~-~GLNtGsFLIRNs~WS~~fLd~W~~mgp~~ 270 (438)
..+++|.|++||+|++|... |. +.+.-..+.. -+ ...| ..+|+|+|+|+.+. ...+.+.++
T Consensus 91 ~l~~ydrvlYLDaD~lv~~d---i~-eLf~~~~~aA--v~-----d~~~~~~fNsGvmlin~~~---~~~~~l~~~---- 152 (333)
T 1ll2_A 91 SLTQYSKCVFMDADTLVLAN---ID-DLFEREELSA--AP-----DPGWPDCFNSGVFVYQPSV---ETYNQLLHV---- 152 (333)
T ss_dssp GCTTCSEEEEECTTEEECSC---CG-GGGGSCSSEE--EE-----CSSSTTSEEEEEEEECCCH---HHHHHHHHH----
T ss_pred HhcCCCeEEEEeCCEEeccC---HH-HHhCCCceeE--Ee-----cCCCCcceeeeEEEEeCCH---HHHHHHHHH----
Confidence 44788999999999999973 21 2221111110 00 1122 47999999999863 223333321
Q ss_pred ccccchhhhhhccccCCCCCCCchHHHHHHHHH
Q 045999 271 ADYAKWGQIQRSTFKDKIFPESDDQAALIYLLY 303 (438)
Q Consensus 271 P~y~~~g~~l~~~l~d~~~~e~~DQsAL~~LL~ 303 (438)
..+ ...+..+||+.|..++.
T Consensus 153 --~~~-----------~~~~~~~DQ~~LN~~f~ 172 (333)
T 1ll2_A 153 --ASE-----------QGSFDGGDQGLLNTFFN 172 (333)
T ss_dssp --HHH-----------TCCTTSSHHHHHHHHTT
T ss_pred --HHh-----------cCCCCCCCHHHHHHHHH
Confidence 000 11233589999999876
No 3
>3u2u_A Glycogenin-1, GN-1, GN1; structural genomics, structural genomics consortium, SGC, transferase, glycosyltransferase, glycogen biosynthesis; HET: GLC UDP; 1.45A {Homo sapiens} SCOP: c.68.1.14 PDB: 3t7n_A* 3t7o_A* 3t7m_A* 3u2v_A* 3u2x_A* 3u2t_A 3rmv_A* 3rmw_A* 3u2w_A* 3qvb_A* 3q4s_A* 1zct_A* 3v8y_A 3v8z_A* 3usr_A 3v90_A 3v91_A* 3usq_A
Probab=95.55 E-value=0.046 Score=52.92 Aligned_cols=92 Identities=14% Similarity=0.238 Sum_probs=53.8
Q ss_pred CCCccchHHHHHHHHHhCCCCcEEEEEcCCeeeecCCCCCCccccCCCCccccCCCcccccCCCC-CcccceeeEEeCCH
Q 045999 176 MNSFWAKLPVVKAAMLAHPEAEWIWWVDSDAAFTDMEFKLPLERYRNHNVVVHGWPKLIYEAKSW-TSLNAGVFLIRNCQ 254 (438)
Q Consensus 176 ~~~~W~Kv~~LR~aM~~~P~aEWvwWLDaDAlImn~~~~Lple~~~d~nlvi~~~~~lv~~tqD~-~GLNtGsFLIRNs~ 254 (438)
...+|.|+.+-+ ..++|=|++||+|+++... |. +.+.-..+.- -++ ..| ..+|+|+|+|+.+.
T Consensus 81 ~~~~~~kl~~~~-----l~~~~~vlylD~D~~v~~~---~~-~Lf~~~~~aA--~~d-----~~~~~~fNsGv~li~p~~ 144 (263)
T 3u2u_A 81 LGVTLTKLHCWS-----LTQYSKCVFMDADTLVLAN---ID-DLFDREELSA--APD-----PGWPDCFNSGVFVYQPSV 144 (263)
T ss_dssp GGGGGGGGGGGG-----CTTCSEEEEECTTEEECSC---CG-GGGGSCSSEE--EEC-----TTSTTSEEEEEEEECCCH
T ss_pred hhHHhHHHHhcc-----ccCcceEEEEcCCEeeccC---HH-HHhCCCcceE--ecc-----CCCCccccCeEEEEcccH
Confidence 346788876554 2357999999999999873 21 2221111110 000 112 46999999999864
Q ss_pred hHHHHHHHHHhhCCCCccccchhhhhhccccCCCCCCCchHHHHHHHHH
Q 045999 255 WSMDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDDQAALIYLLY 303 (438)
Q Consensus 255 WS~~fLd~W~~mgp~~P~y~~~g~~l~~~l~d~~~~e~~DQsAL~~LL~ 303 (438)
...+.+.++ ..+ ...+...||+.|..++.
T Consensus 145 ---~~~~~l~~~------~~~-----------~~~~~~~DQd~LN~~f~ 173 (263)
T 3u2u_A 145 ---ETYNQLLHL------ASE-----------QGSFDGGDQGILNTFFS 173 (263)
T ss_dssp ---HHHHHHHHH------HHH-----------HCCTTSSHHHHHHHHTT
T ss_pred ---HHHHHHHHH------HHh-----------cCCCCcccHHHHHHHhc
Confidence 333333331 000 11234689999999986
No 4
>3tzt_A Glycosyl transferase family 8; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, putative glycosyl transferase; HET: MSE CIT; 2.10A {Anaerococcus prevotii} SCOP: c.68.1.0
Probab=92.60 E-value=0.35 Score=46.52 Aligned_cols=56 Identities=11% Similarity=0.073 Sum_probs=32.6
Q ss_pred HHHHHHhCCcEEEeccccC--CC--CCCccchHHHHHHHHH-hCC-CCcEEEEEcCCeeeec
Q 045999 155 VDYCRIHGYDIFYNNVLLN--PK--MNSFWAKLPVVKAAML-AHP-EAEWIWWVDSDAAFTD 210 (438)
Q Consensus 155 ~~YAr~HGY~l~~~~~~~~--~~--~~~~W~Kv~~LR~aM~-~~P-~aEWvwWLDaDAlImn 210 (438)
...++..|.++.+...... .. ....|+...+.|=.+- -.| +++-|++||+|++|..
T Consensus 54 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~s~~~~~rl~~~~l~p~~~~kvlylD~D~iv~~ 115 (276)
T 3tzt_A 54 GEDLKKFSYTLYPIRATDDLFSFAKVTDRYPKEMYYRLLAGEFLPENLGEILYLDPDMLVIN 115 (276)
T ss_dssp HHHHHTTTCEEEEEECC-------------CHHHHHHHTHHHHSCTTCCEEEEECSSEEECS
T ss_pred HHHHHHcCCEEEEEEeCHHHHhcCccccccCHHHHHHHHHHHHcccccCeEEEEeCCeeecC
Confidence 3445667777776543211 01 1223555555555443 457 5999999999999986
No 5
>1g9r_A Glycosyl transferase; alpha-beta structure; HET: UPF; 2.00A {Neisseria meningitidis} SCOP: c.68.1.4 PDB: 1ga8_A* 1ss9_A*
Probab=92.58 E-value=0.13 Score=49.93 Aligned_cols=123 Identities=20% Similarity=0.145 Sum_probs=62.0
Q ss_pred HHHhCCcEEEeccc---c--CCCCCCccchHHHHHHHHH-hCCCCcEEEEEcCCeeeecCCCCCC-c-c-ccCCCCc--c
Q 045999 158 CRIHGYDIFYNNVL---L--NPKMNSFWAKLPVVKAAML-AHPEAEWIWWVDSDAAFTDMEFKLP-L-E-RYRNHNV--V 226 (438)
Q Consensus 158 Ar~HGY~l~~~~~~---~--~~~~~~~W~Kv~~LR~aM~-~~P~aEWvwWLDaDAlImn~~~~Lp-l-e-~~~d~nl--v 226 (438)
+...|..+.+.... + .+.....|+...+.|=.+- ..|+++.|++||+|++|... |. + + .+.+..+ +
T Consensus 52 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~s~~~y~Rl~l~~ll~~~~kvlyLD~D~iv~~d---i~eL~~~~l~~~~~aav 128 (311)
T 1g9r_A 52 LRGGGGNIRFIDVNPEDFAGFPLNIRHISITTYARLKLGEYIADCDKVLYLDIDVLVRDS---LTPLWDTDLGDNWLGAS 128 (311)
T ss_dssp SGGGTTTEEEEECCGGGGTTSCCCCTTCCGGGGGGGGHHHHCCSCSCEEEECSSEEECSC---CHHHHTCCCTTCSEEEE
T ss_pred HHHcCCEEEEEEcCHHHHhcCccccccCCHHHHHHHHHHHHhhhcCEEEEEcCCeEeccC---HHHHhccCCCCcEEEEE
Confidence 34567777665432 1 1221233443333332222 13899999999999999873 21 0 0 0111111 1
Q ss_pred ccC----CC---cccccCCCCCcccceeeEEeCCHhH-----HHHHHHHHhhCCCCccccchhhhhhccccCCCCCCCch
Q 045999 227 VHG----WP---KLIYEAKSWTSLNAGVFLIRNCQWS-----MDFMDTWANMGPIGADYAKWGQIQRSTFKDKIFPESDD 294 (438)
Q Consensus 227 i~~----~~---~lv~~tqD~~GLNtGsFLIRNs~WS-----~~fLd~W~~mgp~~P~y~~~g~~l~~~l~d~~~~e~~D 294 (438)
... .+ ..+-...+-..+|+|+++|..+.|- ..+++.... +. ......|
T Consensus 129 ~d~~~~~~~~~~~~~~~~~~~~yfNsGv~linl~~~r~~~~~~~~~~~~~~-------~~-------------~~~~~~D 188 (311)
T 1g9r_A 129 IDLFVERQEGYKQKIGMADGEYYFNAGVLLINLKKWRRHDIFKMSSEWVEQ-------YK-------------DVMQYQD 188 (311)
T ss_dssp ECHHHHTSTTHHHHTTCCTTSCCEEEEEEEECHHHHTTSCHHHHHHHHHHH-------HT-------------TTCSSHH
T ss_pred eccchhhhHHHHHhcCCCCCCceEeeeeeeeeHHHHHhcchHHHHHHHHHh-------cc-------------CcCccCC
Confidence 100 00 0000012335899999999887773 444432221 10 1123589
Q ss_pred HHHHHHHHH
Q 045999 295 QAALIYLLY 303 (438)
Q Consensus 295 QsAL~~LL~ 303 (438)
|+.|..++.
T Consensus 189 Qd~lN~~f~ 197 (311)
T 1g9r_A 189 QDILNGLFK 197 (311)
T ss_dssp HHHHHHHHT
T ss_pred cCHHHHHHc
Confidence 999988765
No 6
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=61.15 E-value=56 Score=31.27 Aligned_cols=77 Identities=9% Similarity=0.119 Sum_probs=47.7
Q ss_pred CCCcEEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHh--CCcEEEeccccCCCCCCccchHHHHHHHH----HhCCCC
Q 045999 123 ARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIH--GYDIFYNNVLLNPKMNSFWAKLPVVKAAM----LAHPEA 196 (438)
Q Consensus 123 ~~prIvIVT~s~p~~~~~~~gd~~l~~ai~Nk~~YAr~H--GY~l~~~~~~~~~~~~~~W~Kv~~LR~aM----~~~P~a 196 (438)
..++|.||...-.+ ..++..+++.-..+.+.. .|++++++...+ ..+.|-.++-..+ .+ -+.
T Consensus 63 ~~~~VSIIIP~yN~-------~~~L~~~L~sl~~~l~q~~~~~EIiVVdds~d----~~f~~a~a~N~G~~~al~~-A~g 130 (287)
T 2fy7_A 63 SPHKVAIIIPFRNR-------QEHLKYWLYYLHPVLQRQQLDYGIYVINQAGD----TIFNRAKLLNVGFQEALKD-YDY 130 (287)
T ss_dssp CSCEEEEEEEESSC-------HHHHHHHHHHHHHHHHHTTCEEEEEEEEECSS----SCCCHHHHHHHHHHHHHHH-SCC
T ss_pred cCCcEEEEEeeCCC-------HHHHHHHHHHHHHHHHHhcCCceEEEEEeCCC----CccchhhhhhhHHHHHHHh-CCC
Confidence 35688877764433 466777777766444443 456666655322 3345554444433 33 467
Q ss_pred cEEEEEcCCeeeecC
Q 045999 197 EWIWWVDSDAAFTDM 211 (438)
Q Consensus 197 EWvwWLDaDAlImn~ 211 (438)
|||+++|+|+++..-
T Consensus 131 d~i~flD~D~i~~~d 145 (287)
T 2fy7_A 131 TCFVFSDVDLIPMND 145 (287)
T ss_dssp CEEEEECTTEEESBT
T ss_pred CEEEEECCCcccCCC
Confidence 999999999998764
No 7
>2c0n_A A197; thermophil protein, thermophilic virus, STIV, sulfolobus turreted ICOS virus; 1.86A {Sulfolobus turreted icosahedral virus}
Probab=40.33 E-value=55 Score=30.66 Aligned_cols=49 Identities=10% Similarity=0.151 Sum_probs=31.8
Q ss_pred hHHHHHHHhCCcEEEeccccCCCCCCccchHHHHHHHH----HhCCCCcEEEEEcCCeeeec
Q 045999 153 NKVDYCRIHGYDIFYNNVLLNPKMNSFWAKLPVVKAAM----LAHPEAEWIWWVDSDAAFTD 210 (438)
Q Consensus 153 Nk~~YAr~HGY~l~~~~~~~~~~~~~~W~Kv~~LR~aM----~~~P~aEWvwWLDaDAlImn 210 (438)
.-+.-|.++|+++.+... ++ =++.-|.+| .+..++++++|||||.+=+.
T Consensus 16 ~l~~~l~~~gi~~~l~~~--~S-------lI~raRN~lv~~Fl~~~~~dhllfIDAD~~~I~ 68 (203)
T 2c0n_A 16 PLIDFLVKNDIEYVILSR--RN-------HVAVQREIALDMFLEMKDYDTLAFLDEDVVPIE 68 (203)
T ss_dssp HHHHHHHHTTCCEEEECC--CS-------CHHHHHHHHHHHHHHCTTCCEEEEECTTEEEEE
T ss_pred HHHHHHHhCCCeEEEEcc--cc-------chHHHHHHHHHHHHhcCCCCEEEEEeCCCCccc
Confidence 345668889999997654 22 223323333 24578999999999955443
No 8
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=38.15 E-value=52 Score=30.06 Aligned_cols=75 Identities=4% Similarity=-0.044 Sum_probs=40.6
Q ss_pred CCcEEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHh-CCcEEEeccccCCCCCCccchHHHHHHHHHhCCCCcEEEEE
Q 045999 124 RERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIH-GYDIFYNNVLLNPKMNSFWAKLPVVKAAMLAHPEAEWIWWV 202 (438)
Q Consensus 124 ~prIvIVT~s~p~~~~~~~gd~~l~~ai~Nk~~YAr~H-GY~l~~~~~~~~~~~~~~W~Kv~~LR~aM~~~P~aEWvwWL 202 (438)
.+.|.||+..+. ..++.+.++.-..-.... .|++++++..-.. ..+ .-.+.-..+.+ -..|||++|
T Consensus 15 ~~~iSII~~yN~--------~~~l~~~l~sl~~sl~~q~~~EiIVVDn~s~d-~~g---~a~a~N~Gi~~-A~g~yl~fl 81 (249)
T 2nxv_A 15 TLMFSVCSLVRD--------QAKYDRLLESFERFGFTPDKAEFLAADNREGN-QFH---GFSWHKQMLPR-CKGRYVIFC 81 (249)
T ss_dssp CCSEEEEEEESC--------HHHHHHHHHHHHHTTCCTTTEEEEEEECTTSC-SCC---TTTHHHHHGGG-CCSSEEEEE
T ss_pred cceEEEEEeeCC--------HHHHHHHHHHHHHhccCCCcEEEEEEECCCCC-ccc---HHHHHHHHHHh-cCCCEEEEE
Confidence 457877766543 355677776433211111 2778776542111 011 11233344432 367999999
Q ss_pred cCCeeeecCC
Q 045999 203 DSDAAFTDME 212 (438)
Q Consensus 203 DaDAlImn~~ 212 (438)
|+|+++ +++
T Consensus 82 n~D~~~-~~~ 90 (249)
T 2nxv_A 82 HEDVEL-VDR 90 (249)
T ss_dssp ETTEEC-SSC
T ss_pred CCCccc-Ccc
Confidence 999999 544
No 9
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=24.73 E-value=1.4e+02 Score=28.37 Aligned_cols=81 Identities=10% Similarity=-0.001 Sum_probs=44.8
Q ss_pred CCCcEEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHhCCcEEEeccc-cCC--------------------CCCCccc
Q 045999 123 ARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIHGYDIFYNNVL-LNP--------------------KMNSFWA 181 (438)
Q Consensus 123 ~~prIvIVT~s~p~~~~~~~gd~~l~~ai~Nk~~YAr~HGY~l~~~~~~-~~~--------------------~~~~~W~ 181 (438)
..++|.||...-.. ..++..+++.-..-.....+++++++.. .+. .....--
T Consensus 46 ~~~~vSViIp~yN~-------~~~l~~~l~sl~~q~~~~~~eiivVDdgS~D~t~~~~~~~~~~~~~~~~~~~~~~~n~G 118 (329)
T 3ckj_A 46 AGRTISVVLPALDE-------EDTIGSVIDSISPLVDGLVDELIVLDSGSTDDTEIRAVAAGARVVSREQALPEVPIRPG 118 (329)
T ss_dssp TTCCEEEEEEESSC-------TTTHHHHHHHHGGGBTTTBSEEEEEECSCCSSHHHHHHHTTCEEEEHHHHCTTSCCCCS
T ss_pred cCCcEEEEEeeCCC-------HHHHHHHHHHHHHhhCCCCcEEEEEeCCCCchHHHHHHHhhhhhccceeeeccCCCCCC
Confidence 45778776653323 2345555555433221234788876531 110 0122334
Q ss_pred hHHHHHHHHHhCCCCcEEEEEcCCeeeecC
Q 045999 182 KLPVVKAAMLAHPEAEWIWWVDSDAAFTDM 211 (438)
Q Consensus 182 Kv~~LR~aM~~~P~aEWvwWLDaDAlImn~ 211 (438)
|-.++...+.. -+.|||++||+|.+..++
T Consensus 119 ~~~a~n~g~~~-a~gd~i~~lD~D~~~~~p 147 (329)
T 3ckj_A 119 KGEALWRSLAA-SRGDIVVFVDSDLINPHP 147 (329)
T ss_dssp HHHHHHHHHHH-CCCSEEEECCTTEESCCT
T ss_pred HHHHHHHHHHh-CCCCEEEEECCCCCCcCh
Confidence 55666666654 367999999999995444
No 10
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=23.24 E-value=1.8e+02 Score=29.27 Aligned_cols=80 Identities=15% Similarity=0.060 Sum_probs=45.5
Q ss_pred CCCcEEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHh-CCcEEEecc-ccCC----------C-----CCCccchHHH
Q 045999 123 ARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIH-GYDIFYNNV-LLNP----------K-----MNSFWAKLPV 185 (438)
Q Consensus 123 ~~prIvIVT~s~p~~~~~~~gd~~l~~ai~Nk~~YAr~H-GY~l~~~~~-~~~~----------~-----~~~~W~Kv~~ 185 (438)
..|+|.||...-.+. .+++.+.++.-......+ -|++++++. ..+. . ....-.+..+
T Consensus 64 ~~p~vSVIIp~yN~~------~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~~~~~~~~~~v~vi~~~~n~G~~~A 137 (501)
T 2ffu_A 64 DLPATSVVITFHNEA------RSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPEDGALLGKIEKVRVLRNDRREGLMRS 137 (501)
T ss_dssp SCCCEEEEEEESSCC------HHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHHHHGGGGBTTEEEEECSSCCHHHHH
T ss_pred CCCCEEEEEEeCcCc------HHHHHHHHHHHHhhCchhhceeEEEEECCCCchHHHHHHhcCCCEEEEECCCCcCHHHH
Confidence 457787776644332 346777777665433222 257777653 1111 0 0112224455
Q ss_pred HHHHHHhCCCCcEEEEEcCCeeee
Q 045999 186 VKAAMLAHPEAEWIWWVDSDAAFT 209 (438)
Q Consensus 186 LR~aM~~~P~aEWvwWLDaDAlIm 209 (438)
+...+.. -..|||++||+|..+.
T Consensus 138 ~N~G~~~-A~gd~i~flD~D~~~~ 160 (501)
T 2ffu_A 138 RVRGADA-AQAKVLTFLDSHCECN 160 (501)
T ss_dssp HHHHHHH-CCSSEEEECCSSEEEC
T ss_pred HHHHHHh-cCCCEEEEECCCcccC
Confidence 5555543 3689999999999874
No 11
>2lju_A Putative oxidoreductase; structural genomics, seattle structural GENO center for infectious disease, ssgcid; NMR {Ehrlichia chaffeensis}
Probab=21.25 E-value=46 Score=28.19 Aligned_cols=19 Identities=16% Similarity=0.099 Sum_probs=15.2
Q ss_pred HHhHHHHHHHhCCcEEEec
Q 045999 151 FKNKVDYCRIHGYDIFYNN 169 (438)
Q Consensus 151 i~Nk~~YAr~HGY~l~~~~ 169 (438)
.+--+.||++||+++++..
T Consensus 69 kE~AiayAek~G~~y~V~e 87 (108)
T 2lju_A 69 RELAIAYAVAHKIDYTVLQ 87 (108)
T ss_dssp HHHHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHHHcCCEEEEec
Confidence 3445689999999999864
No 12
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=20.75 E-value=2e+02 Score=29.72 Aligned_cols=80 Identities=9% Similarity=-0.031 Sum_probs=45.9
Q ss_pred CCCcEEEEEccCCCCCCCCchHHHHHHHHHhHHHHHHHh-CCcEEEecc-ccCCC-------------------CCCccc
Q 045999 123 ARERVVLVTGSQPKPCKNPIGDHLLLRFFKNKVDYCRIH-GYDIFYNNV-LLNPK-------------------MNSFWA 181 (438)
Q Consensus 123 ~~prIvIVT~s~p~~~~~~~gd~~l~~ai~Nk~~YAr~H-GY~l~~~~~-~~~~~-------------------~~~~W~ 181 (438)
..|+|.||...-.+. ..++.+++..-..-.-.+ -|++++++. ..++. ....-.
T Consensus 110 ~~P~vSVIIp~yNe~------~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl~~~l~~~~~~~~~v~vi~~~~n~G 183 (570)
T 2d7i_A 110 TLPNTSIIIPFHNEG------WSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHLKKPLEDYMALFPSVRILRTKKREG 183 (570)
T ss_dssp SCCCEEEEEEESSCC------HHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGGTHHHHHHHTTSTTEEEEECSSCCC
T ss_pred CCCCeEEEEEECCCC------HHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHHHHHHHHHHHhCCeEEEEECCCCCC
Confidence 457787777654331 366777777765433222 246776653 11111 012233
Q ss_pred hHHHHHHHHHhCCCCcEEEEEcCCeeee
Q 045999 182 KLPVVKAAMLAHPEAEWIWWVDSDAAFT 209 (438)
Q Consensus 182 Kv~~LR~aM~~~P~aEWvwWLDaDAlIm 209 (438)
+..++...+.. -..|||++||+|+++.
T Consensus 184 ~~~A~N~G~~~-A~gd~i~fLD~D~~~~ 210 (570)
T 2d7i_A 184 LIRTRMLGASV-ATGDVITFLDSHCEAN 210 (570)
T ss_dssp HHHHHHHHHHH-CCSSEEEECCSSEEEC
T ss_pred HHHHHHHHHHh-cCCCEEEEEcCCcccc
Confidence 45555555543 3679999999999994
Done!