BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>046001
MSQEQPRRPIKYGDVFSVEGEIAEMAVAPRDAALMQTAENAMLGQIQKGTAASMMQSAAE
RNEKGGFVGHDDMADVAAGQGVSITETNLPGRRIITEEIGGQVVGQYSQPSSLQSLAPPS
SHGEVKGGGITIGEALEATALTAGKKPVEWSDAAAIQAAEVRATGRINITPGGVAAAAQS
AATINARTTRDEDKTKLADILTDATAKLPADKQVTRKDAEGVAAAEMRNDPMLTTHPAGV
AASVAAAARLNQSNKN

High Scoring Gene Products

Symbol, full name Information P value
AT3G22490 protein from Arabidopsis thaliana 2.4e-60
ATECP31
AT3G22500
protein from Arabidopsis thaliana 3.7e-55
AT5G27980 protein from Arabidopsis thaliana 1.5e-39
RAB28
responsive to abscisic acid 28
protein from Arabidopsis thaliana 2.9e-25
AT5G53270 protein from Arabidopsis thaliana 3.3e-15
AT5G53260 protein from Arabidopsis thaliana 6.9e-15

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  046001
        (256 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2077081 - symbol:AT3G22490 "AT3G22490" species...   618  2.4e-60   1
TAIR|locus:2076996 - symbol:ATECP31 "AT3G22500" species:3...   569  3.7e-55   1
TAIR|locus:2143789 - symbol:AT5G27980 "AT5G27980" species...   390  1.5e-39   2
TAIR|locus:2007529 - symbol:RAB28 "responsive to abscisic...   287  2.9e-25   1
TAIR|locus:2154252 - symbol:AT5G53270 "AT5G53270" species...   192  3.3e-15   1
TAIR|locus:2154242 - symbol:AT5G53260 "AT5G53260" species...   189  6.9e-15   1


>TAIR|locus:2077081 [details] [associations]
            symbol:AT3G22490 "AT3G22490" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=ISS] Pfam:PF04927 EMBL:CP002686
            EMBL:AP000731 UniGene:At.64534 InterPro:IPR007011
            ProtClustDB:CLSN2684142 EMBL:BT002907 EMBL:BT004425 IPI:IPI00543172
            RefSeq:NP_188888.1 PRIDE:Q9LJ97 EnsemblPlants:AT3G22490.1
            GeneID:821820 KEGG:ath:AT3G22490 TAIR:At3g22490
            HOGENOM:HOG000239749 InParanoid:Q9LJ97 OMA:KPVAPQD PhylomeDB:Q9LJ97
            ArrayExpress:Q9LJ97 Genevestigator:Q9LJ97 Uniprot:Q9LJ97
        Length = 262

 Score = 618 (222.6 bits), Expect = 2.4e-60, P = 2.4e-60
 Identities = 134/260 (51%), Positives = 163/260 (62%)

Query:     1 MSQE-QPRRP---IKYGDVFSVEGEIAEMAVAPRDAALMQTAENAMLGQIQKGTAASMMQ 56
             MSQE QP+RP   + YGDVF V GE+A+  +AP DA +MQ AE  + G  QKG AA++MQ
Sbjct:     1 MSQEEQPKRPQEPVTYGDVFEVSGELADKPIAPEDANMMQAAETRVFGHTQKGGAAAVMQ 60

Query:    57 SAAERNEKGGFVGHDDMADVAAGQGVSITETNLPGRRIITEEIGGQVVGQYXXXXXXXXX 116
             SAA  N++GGFV   D  D+AA +GV++ +T++PG R+ TE +GGQVVGQY         
Sbjct:    61 SAATANKRGGFVHPGDTTDLAAERGVTVAQTDVPGARVTTEFVGGQVVGQYVEPRPVATA 120

Query:   117 XXXXXHGEVKG----GGITIGEALEATALTAGKKPVEWSDAAAIQAAEVRATGRINITPG 172
                    EV G      ITIGEALEAT  TAG KPV+ SDAAAIQAAEVRA G   I PG
Sbjct:   121 AAM--EAEVVGLSLQSAITIGEALEATVQTAGNKPVDQSDAAAIQAAEVRACGTNVIAPG 178

Query:   173 GVXXXXXXXXXXXXRTTRDEDKTKLADILTDATAKLPADKQVTRKDAEGVAAAEMRNDPM 232
             G+               RDEDK KL D+L  AT KL ADK VTR+DAEGV +AE+RN+P 
Sbjct:   179 GIAASAQSAANHNATIDRDEDKIKLIDVLAGATGKLAADKAVTRQDAEGVVSAELRNNPN 238

Query:   233 LTTHPXXXXXXXXXXXRLNQ 252
             L+THP           RLN+
Sbjct:   239 LSTHPGGVAASITAAARLNE 258


>TAIR|locus:2076996 [details] [associations]
            symbol:ATECP31 "AT3G22500" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0009793 "embryo development ending in
            seed dormancy" evidence=ISS] [GO:0016114 "terpenoid biosynthetic
            process" evidence=RCA] Pfam:PF04927 EMBL:CP002686 EMBL:AP000731
            InterPro:IPR007011 EMBL:AY052316 EMBL:BT000845 IPI:IPI00519010
            RefSeq:NP_188889.1 UniGene:At.280 PRIDE:Q9LJ95 ProMEX:Q9LJ95
            EnsemblPlants:AT3G22500.1 GeneID:821821 KEGG:ath:AT3G22500
            TAIR:At3g22500 InParanoid:Q9LJ95 OMA:AATTNIR PhylomeDB:Q9LJ95
            ProtClustDB:CLSN2684142 Genevestigator:Q9LJ95 Uniprot:Q9LJ95
        Length = 256

 Score = 569 (205.4 bits), Expect = 3.7e-55, P = 3.7e-55
 Identities = 125/255 (49%), Positives = 154/255 (60%)

Query:     1 MSQEQPRRP---IKYGDVFSVEGEIAEMAVAPRDAALMQTAENAMLGQIQKGTAASMMQS 57
             MSQEQPRRP   +KYGDVF V GE+A+  +AP DA +MQ+AE  + G  QKG  A++MQS
Sbjct:     1 MSQEQPRRPREPVKYGDVFEVSGELADKPIAPEDAKMMQSAETHVFGHTQKGGPAAVMQS 60

Query:    58 AAERNEKGGFVGHDDMADVAAGQGVSITETNLPGRRIITEEIGGQVVGQYXXXXXXXXXX 117
             AA  N +GGFV  DD  ++ A +G ++ +T +P   + TE +GGQVVGQ+          
Sbjct:    61 AATTNIRGGFVHPDDKTELVAERGATVEQT-VPAATVTTEFVGGQVVGQHVEPRRVVAAA 119

Query:   118 XXXXHGEVKGGGITIGEALEATALTAGKKPVEWSDAAAIQAAEVRATGRINITPGGVXXX 177
                   E     ITIGEALEAT  TAG KPV+ SDAAAIQAAE+RA+G   I   GV   
Sbjct:   120 RTDE--EALQSTITIGEALEATVKTAGNKPVDQSDAAAIQAAEMRASGTNVIALAGVAAS 177

Query:   178 XXXXXXXXXRTTRDEDKTKLADILTDATAKLPADKQVTRKDAEGVAAAEMRNDPMLTTHP 237
                         RDE K KL D+LT A  KL AD+ VTR+DAEGV +AEMRN+P L THP
Sbjct:   178 AQSAADHNATVDRDERKIKLRDVLTGAAGKLSADRAVTREDAEGVVSAEMRNNPKLCTHP 237

Query:   238 XXXXXXXXXXXRLNQ 252
                        RLN+
Sbjct:   238 GGVAASLTVAARLNE 252


>TAIR|locus:2143789 [details] [associations]
            symbol:AT5G27980 "AT5G27980" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0007275 "multicellular organismal
            development" evidence=ISS] [GO:0009860 "pollen tube growth"
            evidence=RCA] Pfam:PF04927 EMBL:CP002688 GenomeReviews:BA000015_GR
            InterPro:IPR007011 EMBL:AK118645 IPI:IPI00541342 RefSeq:NP_198150.1
            UniGene:At.30773 PaxDb:Q8GWT7 PRIDE:Q8GWT7
            EnsemblPlants:AT5G27980.1 GeneID:832868 KEGG:ath:AT5G27980
            TAIR:At5g27980 eggNOG:NOG298104 HOGENOM:HOG000244195 OMA:GRTNIMP
            PhylomeDB:Q8GWT7 ProtClustDB:CLSN2916666 Genevestigator:Q8GWT7
            Uniprot:Q8GWT7
        Length = 192

 Score = 390 (142.3 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
 Identities = 79/126 (62%), Positives = 86/126 (68%)

Query:   128 GGITIGEALEATALTAGKKPVEWSDAAAIQAAEVRATGRINITPGGVXXXXXXXXXXXXR 187
             G ITIGEALEA  LTAG KPVEWSDAAAIQAAEVRATGR NI PGGV            R
Sbjct:    66 GTITIGEALEAAVLTAGNKPVEWSDAAAIQAAEVRATGRTNIMPGGVAASAQSAATLNAR 125

Query:   188 TTRDEDKTKLADILTDATAKLPADKQVTRKDAEGVAAAEMRNDPMLTTHPXXXXXXXXXX 247
                D+ KT LAD+LT A++KLP+DK  TRKDAEGV  AEMRNDP LTT+P          
Sbjct:   126 IGSDDTKTTLADVLTGASSKLPSDKAATRKDAEGVTGAEMRNDPHLTTYPTGVAASVAAA 185

Query:   248 XRLNQS 253
              R+NQS
Sbjct:   186 ARINQS 191

 Score = 48 (22.0 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
 Identities = 21/64 (32%), Positives = 35/64 (54%)

Query:     1 MSQEQPRRPIKYGDVFSVEGEIAEMAVAPRDAALMQTAENAMLGQIQKGTAASMMQSAAE 60
             MS+EQ ++PI   DV   +GE AE  ++  +  + + AE+   G + +   AS  Q+  E
Sbjct:     1 MSEEQLQKPIDCADV---KGE-AEK-ISTTEGGI-KAAEDKEKGVVAE---ASGEQAEGE 51

Query:    61 RNEK 64
              N+K
Sbjct:    52 VNQK 55


>TAIR|locus:2007529 [details] [associations]
            symbol:RAB28 "responsive to abscisic acid 28"
            species:3702 "Arabidopsis thaliana" [GO:0005737 "cytoplasm"
            evidence=ISM] [GO:0007275 "multicellular organismal development"
            evidence=ISS] [GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0005730
            "nucleolus" evidence=IDA] [GO:0006873 "cellular ion homeostasis"
            evidence=IMP] [GO:0009845 "seed germination" evidence=IMP]
            [GO:0010226 "response to lithium ion" evidence=IMP] Pfam:PF04927
            EMBL:CP002684 GenomeReviews:CT485782_GR GO:GO:0005730 GO:GO:0010226
            GO:GO:0009845 GO:GO:0006873 EMBL:AC006550 InterPro:IPR007011
            HOGENOM:HOG000244195 IPI:IPI00539885 PIR:C86162 RefSeq:NP_171811.1
            UniGene:At.42559 PaxDb:Q9SA57 PRIDE:Q9SA57
            EnsemblPlants:AT1G03120.1 GeneID:839571 KEGG:ath:AT1G03120
            TAIR:At1g03120 eggNOG:NOG303957 OMA:DDVARKQ PhylomeDB:Q9SA57
            ProtClustDB:CLSN2913512 Genevestigator:Q9SA57 Uniprot:Q9SA57
        Length = 182

 Score = 287 (106.1 bits), Expect = 2.9e-25, P = 2.9e-25
 Identities = 61/123 (49%), Positives = 73/123 (59%)

Query:   130 ITIGEALEATALTAGKKPVEWSDAAAIQAAEVRATGRINITPGGVXXXXXXXXXXXXRTT 189
             +TIGEALEATAL+ G KPV+  DAAAIQAAE RATG     PGG+            +T 
Sbjct:    58 VTIGEALEATALSLGDKPVDRRDAAAIQAAETRATGESKGRPGGLAVAAQAAATTNEQTV 117

Query:   190 RDEDKTKLADILTDATAKLPADKQVTRKDAEGVAAAEMRNDPMLTTHPXXXXXXXXXXXR 249
              +EDK  +ADILTDA  +LP DK VT +DAE V  AE+R+   + T P           R
Sbjct:   118 SEEDKVNIADILTDAAERLPGDKVVTSEDAEAVVGAELRSSSEMKTTPGGVADSMSAGAR 177

Query:   250 LNQ 252
             LNQ
Sbjct:   178 LNQ 180


>TAIR|locus:2154252 [details] [associations]
            symbol:AT5G53270 "AT5G53270" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005737
            "cytoplasm" evidence=ISM] [GO:0007275 "multicellular organismal
            development" evidence=ISS] Pfam:PF04927 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB013388 InterPro:IPR007011
            IPI:IPI00521222 RefSeq:NP_200139.1 UniGene:At.65673
            EnsemblPlants:AT5G53270.1 GeneID:835408 KEGG:ath:AT5G53270
            TAIR:At5g53270 eggNOG:NOG277291 HOGENOM:HOG000152512 OMA:RKPVETT
            PhylomeDB:Q9FK14 ProtClustDB:CLSN2686524 Genevestigator:Q9FK14
            Uniprot:Q9FK14
        Length = 159

 Score = 192 (72.6 bits), Expect = 3.3e-15, P = 3.3e-15
 Identities = 42/125 (33%), Positives = 61/125 (48%)

Query:   127 GGGITIGEALEATALTAGKKPVEWSDAAAIQAAEVRATGRINITPGGVXXXXXXXXXXXX 186
             G   T+ EAL+A A+  G+KPVE +D AAI+  E RA G    + GGV            
Sbjct:    27 GRSTTLTEALKAAAINVGRKPVETTDLAAIKEVEARAIGGDIESDGGVTAVASKAVARNQ 86

Query:   187 RTTRDEDKTKLADILTDATAKLPADKQVTRKDAEGVAAAEMRNDPMLTTHPXXXXXXXXX 246
             +   D +KT L D++ +   K+  D++VT +DAE V  AE+ + P     P         
Sbjct:    87 KIGEDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELNHSPFNNIIPGGVAESVTA 146

Query:   247 XXRLN 251
               +LN
Sbjct:   147 AYKLN 151


>TAIR|locus:2154242 [details] [associations]
            symbol:AT5G53260 "AT5G53260" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005634
            "nucleus" evidence=ISM] [GO:0007275 "multicellular organismal
            development" evidence=ISS] Pfam:PF04927 EMBL:CP002688
            GenomeReviews:BA000015_GR EMBL:AB013388 InterPro:IPR007011
            HOGENOM:HOG000152512 ProtClustDB:CLSN2686524 IPI:IPI00516866
            RefSeq:NP_200138.1 UniGene:At.55521 PaxDb:Q9FK15
            EnsemblPlants:AT5G53260.1 GeneID:835407 KEGG:ath:AT5G53260
            TAIR:At5g53260 eggNOG:NOG329343 OMA:ISVEEHF PhylomeDB:Q9FK15
            Genevestigator:Q9FK15 Uniprot:Q9FK15
        Length = 176

 Score = 189 (71.6 bits), Expect = 6.9e-15, P = 6.9e-15
 Identities = 41/125 (32%), Positives = 61/125 (48%)

Query:   127 GGGITIGEALEATALTAGKKPVEWSDAAAIQAAEVRATGRINITPGGVXXXXXXXXXXXX 186
             G   T+ EAL+A ++  G KPVE +D AAI+  E RA G    + GGV            
Sbjct:    46 GRSTTLTEALKAASMNVGHKPVETTDVAAIKEVETRAIGGDIESEGGVTAVASKAVARNQ 105

Query:   187 RTTRDEDKTKLADILTDATAKLPADKQVTRKDAEGVAAAEMRNDPMLTTHPXXXXXXXXX 246
             +  +D +KT L D++ +   K+  D++VT +DAE V  AE+ + P     P         
Sbjct:   106 KIGKDNEKTNLGDVIAEIDVKVTRDREVTSEDAEAVIRAELNHSPFNNIIPGGVAESVAA 165

Query:   247 XXRLN 251
               +LN
Sbjct:   166 AYKLN 170


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.310   0.127   0.348    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      256       219   0.00092  112 3  11 23  0.47    33
                                                     32  0.39    36


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  6
  No. of states in DFA:  547 (58 KB)
  Total size of DFA:  136 KB (2086 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:00
  No. of threads or processors used:  24
  Search cpu time:  15.38u 0.14s 15.52t   Elapsed:  00:00:01
  Total cpu time:  15.38u 0.14s 15.52t   Elapsed:  00:00:01
  Start:  Fri May 10 14:32:27 2013   End:  Fri May 10 14:32:28 2013

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