BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 046004
         (157 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6NLC8|Y1648_ARATH Uncharacterized protein At1g66480 OS=Arabidopsis thaliana
           GN=At1g66480 PE=1 SV=1
          Length = 225

 Score = 45.8 bits (107), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 34/108 (31%), Positives = 54/108 (50%), Gaps = 14/108 (12%)

Query: 1   MGNCLVLEEKVIKVMKTDGKILEYNQPIRVQDVLAEFSGHAISDSLPEIRH-------LR 53
           MGN + ++ K  KVMK DG+      P+  ++V A++ G+ + DS   ++H       L 
Sbjct: 1   MGNSITVKRKRAKVMKIDGETFRIKTPVTAREVTADYPGYVLLDSQ-AVKHFGVRSKPLE 59

Query: 54  PDFKLVGGNLYFLVPVP-LPSQKV---QKKKVRFSDEEAG--AGAKER 95
           P+  L     YFLV +P LP +      + K+ +    +G   GAKER
Sbjct: 60  PNQTLKPKKTYFLVELPKLPPETTAVDTENKLPYRRVMSGIHVGAKER 107


>sp|P14362|V250_FOWPN Uncharacterized protein FPV250 OS=Fowlpox virus (strain NVSL)
          GN=FPV250 PE=4 SV=1
          Length = 140

 Score = 30.0 bits (66), Expect = 6.2,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 9  EKVIKVMKTDGKILEYNQP--IRVQDVLAEFSGHAISDSLPEIRHLRPDFK 57
          E +I +M  DGKI  Y+     +V D + EFS   + +   E+ H R D K
Sbjct: 45 ENLIILMSEDGKIYVYDDEALYKVADTMEEFSEIGLINLGNEVYHCREDIK 95


>sp|Q8C008|DZAN1_MOUSE Double zinc ribbon and ankyrin repeat-containing protein 1 OS=Mus
           musculus GN=Dzank1 PE=1 SV=2
          Length = 778

 Score = 29.3 bits (64), Expect = 9.4,   Method: Composition-based stats.
 Identities = 26/117 (22%), Positives = 53/117 (45%), Gaps = 20/117 (17%)

Query: 53  RPDF-KLVGG----NLYFLVPVPLPSQKVQKKKVRFSDEEAGAGAKERGGVVRI------ 101
           +PDF K VG        ++ P+ LP  K+Q K V  S +      ++ G V ++      
Sbjct: 51  KPDFLKKVGSGENNTFKYVKPITLPDGKIQVKAVAVSKD-----CRQSGIVTKVFQVDYE 105

Query: 102 --KLVISKQELEELLQKQGVSVKDMVSRIQSKQSADDFQSGDNTKAWKPELESIPEI 156
             K+V S+  +E+ L  +G S +++ +     +    +++ +N   W   L  + ++
Sbjct: 106 PPKMVSSEDNVEDAL--KGFSKQELKNGFVGPKLRKKYKNAENKSTWNVNLRRLADL 160


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.314    0.135    0.372 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,448,982
Number of Sequences: 539616
Number of extensions: 2509807
Number of successful extensions: 5814
Number of sequences better than 100.0: 18
Number of HSP's better than 100.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 5806
Number of HSP's gapped (non-prelim): 18
length of query: 157
length of database: 191,569,459
effective HSP length: 108
effective length of query: 49
effective length of database: 133,290,931
effective search space: 6531255619
effective search space used: 6531255619
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)